BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7977
(1225 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242010743|ref|XP_002426118.1| DNA damage-binding protein, putative [Pediculus humanus corporis]
gi|212510165|gb|EEB13380.1| DNA damage-binding protein, putative [Pediculus humanus corporis]
Length = 1148
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/547 (71%), Positives = 449/547 (82%), Gaps = 12/547 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEP--KVELLGEISIPECLTYLDNGVVFVGSR 138
RYLLGD+AG LFMLLLE EEK+DGT VKE KVELLGEISIPE +TYLDNGV+F+GSR
Sbjct: 270 RYLLGDMAGHLFMLLLETEEKIDGTPCVKENGLKVELLGEISIPEAITYLDNGVLFIGSR 329
Query: 139 LGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSL 198
GDSQLVKLN SPDENG YV++ME+FTNLAPI+DMVVVDLERQGQGQLVTCSG FKEGSL
Sbjct: 330 CGDSQLVKLNTSPDENGYYVTIMEAFTNLAPILDMVVVDLERQGQGQLVTCSGAFKEGSL 389
Query: 199 RIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
RIIRNGIGI+EHA IDL GIKG+WAL DNT+VL+FVG TR+LTL+G EVEETE
Sbjct: 390 RIIRNGIGIQEHATIDLLGIKGMWALRASLDSVYDNTIVLAFVGQTRILTLNGEEVEETE 449
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF SDQQ+FYCGNV+ ++Q+TP+ A LIS E+K VS W PP GK+ISVV+CN Q
Sbjct: 450 IPGFLSDQQSFYCGNVENNNMIQLTPTCARLISVETKQLVSEWRPPAGKTISVVACNTVQ 509
Query: 319 VLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAK-AQLAAVGLW 377
+CA G D+YYLE+ +E+ Q + LEYEVACLDI+PL SE K A + AVGLW
Sbjct: 510 AICAAGSDLYYLEILKNELVQKGNTTLEYEVACLDITPL------SEGGKTADIIAVGLW 563
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDISAR+L LP LEE+ +E LGGEIIPRSILMTCFE YLL ALGDGSMFYFSL+ +G
Sbjct: 564 TDISARILKLPDLEELNREYLGGEIIPRSILMTCFENINYLLCALGDGSMFYFSLNNQNG 623
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
L+DKKKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCS
Sbjct: 624 ILSDKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCS 683
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
LN+E+YPDSLALATDST T GTIDEIQKLHIRTVPLGE+PRRIAYQE++QTFGVIT R+D
Sbjct: 684 LNSEAYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQETTQTFGVITMRMD 743
Query: 558 IQEADGSTPVRPSASTQAQ-NTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLI 616
+ + G PV+ SASTQAQ ++SS I +K G ++ N A+F EVEVHNLL+
Sbjct: 744 VHQRSGLIPVKQSASTQAQSISSSSNIGGAHNLKSGPA--ASINSFAEFGQEVEVHNLLV 801
Query: 617 IDQNTFE 623
IDQ+TFE
Sbjct: 802 IDQHTFE 808
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/286 (75%), Positives = 247/286 (86%), Gaps = 2/286 (0%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T +DLNL++AKN R+EIH VTPEGLRP+KEI LY +I+V+KFFR P + KDLLFI+T R
Sbjct: 24 TSPSDLNLILAKNTRLEIHLVTPEGLRPLKEIGLYDRISVVKFFRPPHEHKDLLFIVTTR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC GD +N+EI TKAHGNV+DRIGK SE GIIA+IDPEARVIGLRLY+GL KII
Sbjct: 84 YNAMILECIGDGENIEIKTKAHGNVADRIGKQSETGIIAVIDPEARVIGLRLYDGLLKII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL KDN ELKASSIRMEE+E+QD+ FLHGCQNPTII IHQD+NGRHVKTHEISL++KEF
Sbjct: 144 PLGKDNSELKASSIRMEEVEVQDLNFLHGCQNPTIILIHQDINGRHVKTHEISLRDKEFV 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PWKQDN+E +AS+VIPVPEPL GAIIIGQESILYH+G YVAVAP +I STI CY +
Sbjct: 204 KMPWKQDNVEPDASIVIPVPEPLCGAIIIGQESILYHNGAGYVAVAPPVINQSTITCYTQ 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEP--KVELLGE 967
VD+NG RYLLGD+AG LFMLLLE EEK+DGT VKE KVELLGE
Sbjct: 264 VDSNGSRYLLGDMAGHLFMLLLETEEKIDGTPCVKENGLKVELLGE 309
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 166/234 (70%), Positives = 203/234 (86%), Gaps = 1/234 (0%)
Query: 986 STKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYF 1045
S ++ N A+F EVEVHNLL+IDQ+TFE+LHAHQ EYALSLIS+K G+DPNTY+
Sbjct: 778 SGPAASINSFAEFGQEVEVHNLLVIDQHTFEVLHAHQFMQSEYALSLISTKLGDDPNTYY 837
Query: 1046 VLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVR 1105
++GTA+V+P+E+E KQGRI+IF + +GKL Q+AEKEIKGA YS+ EFNGKLLASINSTVR
Sbjct: 838 IVGTAMVNPDESESKQGRILIFQFQEGKLYQVAEKEIKGAAYSLVEFNGKLLASINSTVR 897
Query: 1106 LFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDY 1165
LFEWT E+ELRLECSHFNNII+L+LK KGDFILVGDL+RS+TLLQYKTMEG FEE++RD+
Sbjct: 898 LFEWTAEQELRLECSHFNNIISLYLKTKGDFILVGDLIRSMTLLQYKTMEGCFEEMARDH 957
Query: 1166 NPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
NPNWMT++EI+DD+ FLGAENS+NLF+CQKDSAA +DE+R + VG HL GD
Sbjct: 958 NPNWMTAVEIIDDDTFLGAENSFNLFVCQKDSAAATDEERQQMHAVGMFHL-GD 1010
Score = 96.7 bits (239), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS +DLNL++AKN R+EIH VTPEGLRP+KEI LY +I+V+KFFR P + KDLLFI+T
Sbjct: 22 NFTSPSDLNLILAKNTRLEIHLVTPEGLRPLKEIGLYDRISVVKFFRPPHEHKDLLFIVT 81
Query: 685 QRTDLNLV--VAKNNRIEIHT 703
R + ++ + IEI T
Sbjct: 82 TRYNAMILECIGDGENIEIKT 102
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 51/70 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI+EHA IDL GIKG+WAL DNT+VL+FVG TR+LTL+G E
Sbjct: 386 EGSLRIIRNGIGIQEHATIDLLGIKGMWALRASLDSVYDNTIVLAFVGQTRILTLNGEEV 445
Query: 61 GFHLLRGFSS 70
+ GF S
Sbjct: 446 EETEIPGFLS 455
>gi|345498295|ref|XP_001607743.2| PREDICTED: DNA damage-binding protein 1-like [Nasonia vitripennis]
Length = 1140
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/543 (69%), Positives = 452/543 (83%), Gaps = 15/543 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGDLAG LFML LE+++K DG+ +K+ KVELLGE+SIPEC+TYLDNGV+F+GSRLG
Sbjct: 273 RYLLGDLAGHLFMLFLEQDKKADGSMVIKDLKVELLGEVSIPECITYLDNGVIFIGSRLG 332
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KLN PDENG+Y S ME+FTNLAPI+DM VVDLERQGQGQ+VTCSG FKEGSLRI
Sbjct: 333 DSQLIKLNTKPDENGSYCSTMETFTNLAPIVDMAVVDLERQGQGQIVTCSGAFKEGSLRI 392
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI+EHA IDLPGIKG+WAL + S N DNTLVLSFVG TR+L L+G EVEETE+
Sbjct: 393 IRNGIGIQEHASIDLPGIKGMWALKVDSV-NFDNTLVLSFVGQTRILMLNGEEVEETEIP 451
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +D+QTF+ GNV ++Q+TP++A LIS +S + +S WEP N ++ISVV+CN QVL
Sbjct: 452 GFVADEQTFHTGNVTNDVIIQITPTSARLISNKSSSVISEWEPDNKRTISVVACNGTQVL 511
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
CATG D++YLE++ ++I + L++EVAC+DISPL + SSE A++ AVGLWTDI
Sbjct: 512 CATGNDLFYLEINDNQIVSKGYTTLQHEVACVDISPL---DGSSE---AKIVAVGLWTDI 565
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
S R+L+LP LEE+ KE LGGEIIPRSILMTCFEG+ YLL ALGDGSM+YF+L+ +G L
Sbjct: 566 SVRILTLPKLEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLNKQNGMLA 625
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
DKKKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLNA
Sbjct: 626 DKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNA 685
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
ESY DSLALATD+T T GTIDEIQKLHIRTVPL E+PRRIAYQES+QTFGVIT R+DIQE
Sbjct: 686 ESYSDSLALATDNTVTIGTIDEIQKLHIRTVPLYESPRRIAYQESTQTFGVITMRVDIQE 745
Query: 561 ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQN 620
++G RPSASTQA ++IS+ ++I T +N ++ EVE+HNLLI+DQ+
Sbjct: 746 SNGVNIARPSASTQA-----ASISNSNHI---PTHNKPSNTASEIGQEVEIHNLLIVDQH 797
Query: 621 TFE 623
TFE
Sbjct: 798 TFE 800
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/284 (71%), Positives = 242/284 (85%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIAV+KFFR +KKDLLF++T R
Sbjct: 27 TSPTDLNLILAKNMRLEIYLVTPEGLRPLKEVGIYGKIAVVKFFRPQHEKKDLLFLLTTR 86
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC G+ +++EI+TKAHGNV+DRIGK SE GI A+IDP+ARVIGLRLY+GLFKII
Sbjct: 87 YNAMILECVGEGEDIEIITKAHGNVADRIGKASETGIKAVIDPKARVIGLRLYDGLFKII 146
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KDN ELKASSIRM+E +QDV FLHGC NPT+I IHQD+NGRHVKTHEISL++KEF
Sbjct: 147 PLDKDNPELKASSIRMDEQNVQDVNFLHGCTNPTLILIHQDINGRHVKTHEISLRDKEFV 206
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PW+QDN+E EA +VIPVP P+ GAIIIGQESILYH G +YV V P IIK STI CYAK
Sbjct: 207 KIPWRQDNVEREAMMVIPVPSPICGAIIIGQESILYHDGTTYVTVVPPIIKQSTISCYAK 266
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD G RYLLGDLAG LFML LE+++K DG+ +K+ KVELLGE
Sbjct: 267 VDNQGLRYLLGDLAGHLFMLFLEQDKKADGSMVIKDLKVELLGE 310
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 171/233 (73%), Positives = 206/233 (88%), Gaps = 1/233 (0%)
Query: 987 TKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFV 1046
T +N ++ EVE+HNLLI+DQ+TFE+LHAH L P EYA+SLIS+K GEDP Y++
Sbjct: 771 THNKPSNTASEIGQEVEIHNLLIVDQHTFEVLHAHTLVPTEYAMSLISTKLGEDPTPYYI 830
Query: 1047 LGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRL 1106
+GTA+++P+E+EPK GRI+++H++DGKL Q+AEKEIKG+CYS+ EFNGKLLASINSTVRL
Sbjct: 831 VGTAMINPDESEPKSGRILLYHWNDGKLTQVAEKEIKGSCYSLVEFNGKLLASINSTVRL 890
Query: 1107 FEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYN 1166
FEWT EKELRLECSHFNNIIAL+LK KGDF+LVGDLMRS+TLLQYKTMEGSFEEI+RDYN
Sbjct: 891 FEWTAEKELRLECSHFNNIIALYLKTKGDFVLVGDLMRSVTLLQYKTMEGSFEEIARDYN 950
Query: 1167 PNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
PNWMTSIEILDD+ FLGAEN +NLF+CQKDSAATS+E+R +QEVG HL GD
Sbjct: 951 PNWMTSIEILDDDTFLGAENCFNLFVCQKDSAATSEEERQQMQEVGQFHL-GD 1002
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIAV+KFFR +KKDLLF++T
Sbjct: 25 NFTSPTDLNLILAKNMRLEIYLVTPEGLRPLKEVGIYGKIAVVKFFRPQHEKKDLLFLLT 84
Query: 685 QRTDLNLV--VAKNNRIEIHT 703
R + ++ V + IEI T
Sbjct: 85 TRYNAMILECVGEGEDIEIIT 105
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
EGSLRIIRNGIGI+EHA IDLPGIKG+WAL + S N DNTLVLSFVG TR+L L+G E
Sbjct: 387 EGSLRIIRNGIGIQEHASIDLPGIKGMWALKVDSV-NFDNTLVLSFVGQTRILMLNGEE 444
>gi|157128864|ref|XP_001655231.1| DNA repair protein xp-e [Aedes aegypti]
gi|108882186|gb|EAT46411.1| AAEL002407-PB [Aedes aegypti]
Length = 1138
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/546 (68%), Positives = 441/546 (80%), Gaps = 19/546 (3%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLG+++G LFM+ LE EE G SVK+ KVELLG+I+IPEC+TYLDNGV+F+GSR G
Sbjct: 270 RYLLGNMSGHLFMMFLETEENSKGLLSVKDIKVELLGDITIPECITYLDNGVLFIGSRHG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN + +NG YV+VME+FTNLAPIIDM +VDLE+QGQGQ++TCSG +KEGSLRI
Sbjct: 330 DSQLVKLNTTAGDNGAYVTVMETFTNLAPIIDMCIVDLEKQGQGQMITCSGSYKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIG---SPKNLDNTLVLSFVGHTRVLTLSGAEVEET 257
IRNGIGI+EHACIDLPGIKG+WAL +G SP DNTLVLSFVGHTR+LTLSG EVEET
Sbjct: 390 IRNGIGIQEHACIDLPGIKGMWALRVGIDDSP--YDNTLVLSFVGHTRILTLSGEEVEET 447
Query: 258 EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKN 317
E+ GF SDQQTFYC NVD ++QVTP+ A LI ++K+ + W+PP+ K ISVV+CN
Sbjct: 448 EIPGFLSDQQTFYCANVDFGQIIQVTPTTARLIQCDNKSMICEWKPPDDKRISVVACNSC 507
Query: 318 QVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
Q++CAT CD+YY+E+ S++ + L+YEVACLDISPL + T A+L AVGLW
Sbjct: 508 QMVCATACDIYYIEIGESKLVHKSTVTLDYEVACLDISPLEDNAT-----HAELVAVGLW 562
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDISA +L LP+LE V E LGGEIIPRSILM FEG YLL ALGDGSMFYF LD +
Sbjct: 563 TDISACILRLPNLEVVHTEKLGGEIIPRSILMAHFEGIVYLLCALGDGSMFYFVLDKNTN 622
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
RLTD+KKVTLGTQPT+LKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCS
Sbjct: 623 RLTDQKKVTLGTQPTILKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCS 682
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
LNAE+Y DSLALAT ++ GTIDEIQKLHIRTVPLGE+PRRIAYQE+SQTFGVIT R D
Sbjct: 683 LNAEAYQDSLALATKNSVILGTIDEIQKLHIRTVPLGESPRRIAYQEASQTFGVITVRTD 742
Query: 558 IQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLII 617
IQ++ G TP R SASTQ N T ST ++ +K G++ A+F EVEVHNLLII
Sbjct: 743 IQDSSGLTPSRQSASTQTTNVTLST--NMGLLKAGASN-------AEFGQEVEVHNLLII 793
Query: 618 DQNTFE 623
DQNTFE
Sbjct: 794 DQNTFE 799
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 192/284 (67%), Positives = 242/284 (85%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL+VAK++R+EI+ VTPEGLRP+KEI + GKIAVMK FR +KDL+FI+T R
Sbjct: 24 TSTTDLNLIVAKSSRLEIYLVTPEGLRPIKEIGINGKIAVMKLFRPAEAQKDLIFILTHR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC D++EI+TKAHGNV+DR+GKP+E GI+A+IDP+ARVIG+RLY GLFKII
Sbjct: 84 YNAMILECAVQGDDIEIITKAHGNVADRVGKPAETGILAVIDPKARVIGMRLYEGLFKII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL++D ELKA+S+RMEE+ +QDV+FL+G Q+PT+I IHQD+NGRH+KTHEI+LK+K+FT
Sbjct: 144 PLDRDTHELKATSLRMEEVHVQDVEFLYGTQHPTLIVIHQDLNGRHIKTHEINLKDKDFT 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++IPVP PLGGAI+IGQES++YH G SYVAVAP IIK STI CYA+
Sbjct: 204 KIAWKQDNVETEATMLIPVPTPLGGAIVIGQESVVYHDGDSYVAVAPAIIKQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD+ G RYLLG+++G LFM+ LE EE G SVK+ KVELLG+
Sbjct: 264 VDSKGFRYLLGNMSGHLFMMFLETEENSKGLLSVKDIKVELLGD 307
Score = 360 bits (923), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 162/224 (72%), Positives = 196/224 (87%), Gaps = 1/224 (0%)
Query: 996 ADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPE 1055
A+F EVEVHNLLIIDQNTFE+LHAHQ EYA+SLIS+K G DPNTY+++GTA+V+PE
Sbjct: 779 AEFGQEVEVHNLLIIDQNTFEVLHAHQFMQTEYAMSLISAKLGNDPNTYYIVGTALVNPE 838
Query: 1056 ENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKEL 1115
E EPK GRIII+HY DG L Q++EKEIKG+CYS+ EFNG++LASINSTVRL+EWT++K+L
Sbjct: 839 EPEPKVGRIIIYHYADGNLTQVSEKEIKGSCYSLVEFNGRVLASINSTVRLYEWTDDKDL 898
Query: 1116 RLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
RLECSHFNN++AL+ K KGDFILVGDLMRS+TLLQYK MEGSFEEI+RDY PNWMT++EI
Sbjct: 899 RLECSHFNNVLALYCKTKGDFILVGDLMRSITLLQYKQMEGSFEEIARDYQPNWMTAVEI 958
Query: 1176 LDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
LDD+ FLGA+NS NLF+C KD AAT+D++R + EV VHL GD
Sbjct: 959 LDDDAFLGADNSNNLFVCLKDGAATTDDERQQMPEVAQVHL-GD 1001
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 58/73 (79%), Gaps = 5/73 (6%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIG---SPKNLDNTLVLSFVGHTRVLTLSG 57
EGSLRIIRNGIGI+EHACIDLPGIKG+WAL +G SP DNTLVLSFVGHTR+LTLSG
Sbjct: 384 EGSLRIIRNGIGIQEHACIDLPGIKGMWALRVGIDDSP--YDNTLVLSFVGHTRILTLSG 441
Query: 58 AEWGFHLLRGFSS 70
E + GF S
Sbjct: 442 EEVEETEIPGFLS 454
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 53/62 (85%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS+TDLNL+VAK++R+EI+ VTPEGLRP+KEI + GKIAVMK FR +KDL+FI+T
Sbjct: 22 NFTSTTDLNLIVAKSSRLEIYLVTPEGLRPIKEIGINGKIAVMKLFRPAEAQKDLIFILT 81
Query: 685 QR 686
R
Sbjct: 82 HR 83
>gi|170057515|ref|XP_001864517.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876915|gb|EDS40298.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1138
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/546 (68%), Positives = 438/546 (80%), Gaps = 19/546 (3%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLG++ G LFM+ LE EE G +VK+ KVELLGEI+IPEC+TYLDNGV+F+GSR G
Sbjct: 270 RYLLGNMIGHLFMMFLETEENTRGQLTVKDIKVELLGEITIPECITYLDNGVLFIGSRHG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN + +G YV+VME+FTNLAPIIDM +VDLERQGQGQ++TCSG +KEGSLRI
Sbjct: 330 DSQLVKLNTTAAASGAYVTVMETFTNLAPIIDMCIVDLERQGQGQMITCSGSYKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIG---SPKNLDNTLVLSFVGHTRVLTLSGAEVEET 257
IRNGIGI+EHACIDLPGIKG+WAL +G SP DNTLVLSFVGHTR+L LSG EVEET
Sbjct: 390 IRNGIGIQEHACIDLPGIKGMWALRVGIDDSP--YDNTLVLSFVGHTRILMLSGEEVEET 447
Query: 258 EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKN 317
E+ GF SDQQTFYC NVD ++QVTP A LIS ++K+ + W+PP+ K I VV+CN
Sbjct: 448 EIPGFLSDQQTFYCANVDFGQIIQVTPMTARLISCDNKSMICEWKPPDDKRIGVVACNSC 507
Query: 318 QVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
Q++CAT D+YY+E+ ++ + L+YEVACLDISPL T SE L AVGLW
Sbjct: 508 QMVCATARDIYYIEIEAGKLVHKSTVTLDYEVACLDISPLDEPATRSE-----LVAVGLW 562
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
T+ISA +L LP+LE V KE LGGEIIPRSILM CFEG YLL ALGDGSMFYF +D +
Sbjct: 563 TEISACILRLPNLEFVHKEKLGGEIIPRSILMACFEGIIYLLCALGDGSMFYFVVDKTTH 622
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
RLTD+KKVTLGTQPT+LKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCS
Sbjct: 623 RLTDQKKVTLGTQPTILKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCS 682
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
LNAESY DSLALAT ++ GTIDEIQKLHIRTVPLGE+PRRIAYQE+SQTFGVIT R+D
Sbjct: 683 LNAESYQDSLALATKNSVILGTIDEIQKLHIRTVPLGESPRRIAYQEASQTFGVITVRMD 742
Query: 558 IQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLII 617
IQ++ G TP R SASTQ N TSS S++ +KPG++ +F EVEVHNLLII
Sbjct: 743 IQDSSGLTPSRQSASTQTSNVTSS--SNMGLLKPGASN-------TEFGQEVEVHNLLII 793
Query: 618 DQNTFE 623
DQNTFE
Sbjct: 794 DQNTFE 799
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/284 (66%), Positives = 240/284 (84%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL+VAK++R+EI+ VTPEGLRP+KE+ + GKIAVMK FR +KDLLFI+T R
Sbjct: 24 TSTTDLNLIVAKSSRLEIYLVTPEGLRPIKEVGINGKIAVMKLFRPAEAQKDLLFILTHR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMIL C+ D++EI+TKAHGNV+DR+GKP+E GI+A+IDP+ARVIG+RLY GLFKII
Sbjct: 84 YNAMILACQVQGDDIEIITKAHGNVADRVGKPAETGILAVIDPKARVIGMRLYEGLFKII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL++D ELKA+S+RMEE+ +QDV+FL+G +PT+I IHQD+NGRH+KTHEI+LK+K+FT
Sbjct: 144 PLDRDTHELKATSLRMEEMHVQDVEFLYGTAHPTLIVIHQDLNGRHIKTHEINLKDKDFT 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++IPVP PLGGAI+IGQES++YH G SYVAVAP IIK STI CYA+
Sbjct: 204 KIAWKQDNVETEATMLIPVPTPLGGAIVIGQESVVYHDGDSYVAVAPAIIKQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD+ G RYLLG++ G LFM+ LE EE G +VK+ KVELLGE
Sbjct: 264 VDSRGFRYLLGNMIGHLFMMFLETEENTRGQLTVKDIKVELLGE 307
Score = 358 bits (920), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 165/247 (66%), Positives = 202/247 (81%), Gaps = 8/247 (3%)
Query: 973 VVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSL 1032
V S++ +KPG++ +F EVEVHNLLIIDQNTFE+LHAHQ EY LSL
Sbjct: 763 VTSSSNMGLLKPGASN-------TEFGQEVEVHNLLIIDQNTFEVLHAHQFMQTEYVLSL 815
Query: 1033 ISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEF 1092
IS+K G DP TY+++GTA+V+PEE EPK GRIII+HY DG L Q++EKEIKGACYS+ EF
Sbjct: 816 ISAKLGNDPATYYIVGTAMVNPEEREPKVGRIIIYHYADGALTQVSEKEIKGACYSLVEF 875
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG++LA+INSTVRL+EWT++K+LRLECSHFNN++AL+ K KGDFILVGDLMRS+TLLQYK
Sbjct: 876 NGRVLATINSTVRLYEWTDDKDLRLECSHFNNVLALYCKTKGDFILVGDLMRSITLLQYK 935
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVG 1212
MEGSFEEI+RDY P WMT++EILDD+ FLGAENS NLF+C KDSAAT+D++R + EV
Sbjct: 936 QMEGSFEEIARDYQPKWMTAVEILDDDAFLGAENSNNLFVCLKDSAATTDDERQQMPEVA 995
Query: 1213 TVHLVGD 1219
HL GD
Sbjct: 996 QFHL-GD 1001
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 57/73 (78%), Gaps = 5/73 (6%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIG---SPKNLDNTLVLSFVGHTRVLTLSG 57
EGSLRIIRNGIGI+EHACIDLPGIKG+WAL +G SP DNTLVLSFVGHTR+L LSG
Sbjct: 384 EGSLRIIRNGIGIQEHACIDLPGIKGMWALRVGIDDSP--YDNTLVLSFVGHTRILMLSG 441
Query: 58 AEWGFHLLRGFSS 70
E + GF S
Sbjct: 442 EEVEETEIPGFLS 454
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 61/81 (75%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS+TDLNL+VAK++R+EI+ VTPEGLRP+KE+ + GKIAVMK FR +KDLLFI+T
Sbjct: 22 NFTSTTDLNLIVAKSSRLEIYLVTPEGLRPIKEVGINGKIAVMKLFRPAEAQKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
R + ++ + +I +T
Sbjct: 82 HRYNAMILACQVQGDDIEIIT 102
>gi|157128866|ref|XP_001655232.1| DNA repair protein xp-e [Aedes aegypti]
gi|108882187|gb|EAT46412.1| AAEL002407-PA [Aedes aegypti]
Length = 980
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/546 (68%), Positives = 441/546 (80%), Gaps = 19/546 (3%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLG+++G LFM+ LE EE G SVK+ KVELLG+I+IPEC+TYLDNGV+F+GSR G
Sbjct: 270 RYLLGNMSGHLFMMFLETEENSKGLLSVKDIKVELLGDITIPECITYLDNGVLFIGSRHG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN + +NG YV+VME+FTNLAPIIDM +VDLE+QGQGQ++TCSG +KEGSLRI
Sbjct: 330 DSQLVKLNTTAGDNGAYVTVMETFTNLAPIIDMCIVDLEKQGQGQMITCSGSYKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIG---SPKNLDNTLVLSFVGHTRVLTLSGAEVEET 257
IRNGIGI+EHACIDLPGIKG+WAL +G SP DNTLVLSFVGHTR+LTLSG EVEET
Sbjct: 390 IRNGIGIQEHACIDLPGIKGMWALRVGIDDSP--YDNTLVLSFVGHTRILTLSGEEVEET 447
Query: 258 EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKN 317
E+ GF SDQQTFYC NVD ++QVTP+ A LI ++K+ + W+PP+ K ISVV+CN
Sbjct: 448 EIPGFLSDQQTFYCANVDFGQIIQVTPTTARLIQCDNKSMICEWKPPDDKRISVVACNSC 507
Query: 318 QVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
Q++CAT CD+YY+E+ S++ + L+YEVACLDISPL + T A+L AVGLW
Sbjct: 508 QMVCATACDIYYIEIGESKLVHKSTVTLDYEVACLDISPLEDNAT-----HAELVAVGLW 562
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDISA +L LP+LE V E LGGEIIPRSILM FEG YLL ALGDGSMFYF LD +
Sbjct: 563 TDISACILRLPNLEVVHTEKLGGEIIPRSILMAHFEGIVYLLCALGDGSMFYFVLDKNTN 622
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
RLTD+KKVTLGTQPT+LKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCS
Sbjct: 623 RLTDQKKVTLGTQPTILKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCS 682
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
LNAE+Y DSLALAT ++ GTIDEIQKLHIRTVPLGE+PRRIAYQE+SQTFGVIT R D
Sbjct: 683 LNAEAYQDSLALATKNSVILGTIDEIQKLHIRTVPLGESPRRIAYQEASQTFGVITVRTD 742
Query: 558 IQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLII 617
IQ++ G TP R SASTQ N T ST ++ +K G++ A+F EVEVHNLLII
Sbjct: 743 IQDSSGLTPSRQSASTQTTNVTLST--NMGLLKAGASN-------AEFGQEVEVHNLLII 793
Query: 618 DQNTFE 623
DQNTFE
Sbjct: 794 DQNTFE 799
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 192/284 (67%), Positives = 242/284 (85%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL+VAK++R+EI+ VTPEGLRP+KEI + GKIAVMK FR +KDL+FI+T R
Sbjct: 24 TSTTDLNLIVAKSSRLEIYLVTPEGLRPIKEIGINGKIAVMKLFRPAEAQKDLIFILTHR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC D++EI+TKAHGNV+DR+GKP+E GI+A+IDP+ARVIG+RLY GLFKII
Sbjct: 84 YNAMILECAVQGDDIEIITKAHGNVADRVGKPAETGILAVIDPKARVIGMRLYEGLFKII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL++D ELKA+S+RMEE+ +QDV+FL+G Q+PT+I IHQD+NGRH+KTHEI+LK+K+FT
Sbjct: 144 PLDRDTHELKATSLRMEEVHVQDVEFLYGTQHPTLIVIHQDLNGRHIKTHEINLKDKDFT 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++IPVP PLGGAI+IGQES++YH G SYVAVAP IIK STI CYA+
Sbjct: 204 KIAWKQDNVETEATMLIPVPTPLGGAIVIGQESVVYHDGDSYVAVAPAIIKQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD+ G RYLLG+++G LFM+ LE EE G SVK+ KVELLG+
Sbjct: 264 VDSKGFRYLLGNMSGHLFMMFLETEENSKGLLSVKDIKVELLGD 307
Score = 339 bits (869), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 150/201 (74%), Positives = 180/201 (89%)
Query: 996 ADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPE 1055
A+F EVEVHNLLIIDQNTFE+LHAHQ EYA+SLIS+K G DPNTY+++GTA+V+PE
Sbjct: 779 AEFGQEVEVHNLLIIDQNTFEVLHAHQFMQTEYAMSLISAKLGNDPNTYYIVGTALVNPE 838
Query: 1056 ENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKEL 1115
E EPK GRIII+HY DG L Q++EKEIKG+CYS+ EFNG++LASINSTVRL+EWT++K+L
Sbjct: 839 EPEPKVGRIIIYHYADGNLTQVSEKEIKGSCYSLVEFNGRVLASINSTVRLYEWTDDKDL 898
Query: 1116 RLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
RLECSHFNN++AL+ K KGDFILVGDLMRS+TLLQYK MEGSFEEI+RDY PNWMT++EI
Sbjct: 899 RLECSHFNNVLALYCKTKGDFILVGDLMRSITLLQYKQMEGSFEEIARDYQPNWMTAVEI 958
Query: 1176 LDDELFLGAENSYNLFICQKD 1196
LDD+ FLGA+NS NLF+C KD
Sbjct: 959 LDDDAFLGADNSNNLFVCLKD 979
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 58/73 (79%), Gaps = 5/73 (6%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIG---SPKNLDNTLVLSFVGHTRVLTLSG 57
EGSLRIIRNGIGI+EHACIDLPGIKG+WAL +G SP DNTLVLSFVGHTR+LTLSG
Sbjct: 384 EGSLRIIRNGIGIQEHACIDLPGIKGMWALRVGIDDSP--YDNTLVLSFVGHTRILTLSG 441
Query: 58 AEWGFHLLRGFSS 70
E + GF S
Sbjct: 442 EEVEETEIPGFLS 454
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 53/62 (85%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS+TDLNL+VAK++R+EI+ VTPEGLRP+KEI + GKIAVMK FR +KDL+FI+T
Sbjct: 22 NFTSTTDLNLIVAKSSRLEIYLVTPEGLRPIKEIGINGKIAVMKLFRPAEAQKDLIFILT 81
Query: 685 QR 686
R
Sbjct: 82 HR 83
>gi|307186138|gb|EFN71863.1| DNA damage-binding protein 1 [Camponotus floridanus]
Length = 1136
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/543 (69%), Positives = 443/543 (81%), Gaps = 16/543 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+AG LFML LE E+K DGT VK+ KVELLGEISIPEC+TYLDNGV++VGSRLG
Sbjct: 270 RYLLGDMAGHLFMLFLELEKKPDGTQVVKDLKVELLGEISIPECITYLDNGVIYVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KL DENG+Y ME+FTNLAPI+DM VVDLERQGQGQ+VTCSG FKEGSLRI
Sbjct: 330 DSQLIKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI+EHA IDLPGIKG+WAL +G N DNTLVLSFVG TR+LTL+G EVEET++
Sbjct: 390 IRNGIGIQEHASIDLPGIKGMWALKVGG-GNFDNTLVLSFVGQTRILTLNGEEVEETDIP 448
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +D+QTF+ GNV +Q+TP++A LIS ESK VS WEP N ++ISVV+CN QVL
Sbjct: 449 GFVADEQTFHTGNVTNDLFIQITPTSARLISHESKMVVSEWEPQNKRTISVVACNGTQVL 508
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
CATG D++Y+E+ ++I L++EVACLDISPL +A++ AVGLWTDI
Sbjct: 509 CATGNDLFYMEISCNQIVPKGFATLQHEVACLDISPLDGVN------EAKIVAVGLWTDI 562
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
S R+L+LP LEE+ KE LGGEIIPRSILMTCFEG+ YLL ALGDGSM+YF+L +G L+
Sbjct: 563 SVRILTLPGLEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLYKQNGVLS 622
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
DKK+VTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLNA
Sbjct: 623 DKKRVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNA 682
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
ESYPDSLALATDST T GTIDEIQKLHIRTVPLGE+PRRIAYQESSQTFGVIT R+D+QE
Sbjct: 683 ESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDVQE 742
Query: 561 ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQN 620
+ G + VR SASTQA + +S S+ KP + + ++ E+EVHNLLIIDQ+
Sbjct: 743 SSGVSIVRHSASTQAASLSSGIA---SHNKP------SGHTASEIGQEIEVHNLLIIDQH 793
Query: 621 TFE 623
TFE
Sbjct: 794 TFE 796
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/284 (72%), Positives = 244/284 (85%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIAV+KFFR P +KKDLLF++T
Sbjct: 24 TSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAVIKFFRPPHEKKDLLFLLTTS 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC G+ +++EI+TKAHGNV+DRIGK SE GI A+IDP+ARVIGLRLY+GLFKII
Sbjct: 84 YNAMILECMGEGEDIEIITKAHGNVADRIGKASETGIKAVIDPKARVIGLRLYDGLFKII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KDN ELKASSIRM+E ++QDV FLHGC NPT+I IHQD+NGRHVKTHEI+L+EKEF+
Sbjct: 144 PLDKDNPELKASSIRMDEQQVQDVNFLHGCTNPTLILIHQDINGRHVKTHEINLREKEFS 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PW+QDN+E EA +VIPVP P+ GAIIIGQESILYH G +YVAV P IIK STI CYAK
Sbjct: 204 KIPWRQDNVEREAMMVIPVPSPICGAIIIGQESILYHDGTTYVAVVPPIIKQSTITCYAK 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD G RYLLGD+AG LFML LE E+K DGT VK+ KVELLGE
Sbjct: 264 VDNQGLRYLLGDMAGHLFMLFLELEKKPDGTQVVKDLKVELLGE 307
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/260 (68%), Positives = 214/260 (82%), Gaps = 14/260 (5%)
Query: 973 VVEMSSLSYIKPGSTKQSTA--------NQPA-----DFNMEVEVHNLLIIDQNTFEILH 1019
V E S +S ++ ++ Q+ + N+P+ + E+EVHNLLIIDQ+TFE+LH
Sbjct: 740 VQESSGVSIVRHSASTQAASLSSGIASHNKPSGHTASEIGQEIEVHNLLIIDQHTFEVLH 799
Query: 1020 AHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAE 1079
AH L P EYALSLIS++ GED +Y+V+GTA ++P+E EPK GRI++FH+ DGKL Q+AE
Sbjct: 800 AHTLMPTEYALSLISTRLGEDSTSYYVVGTAFINPDETEPKMGRILLFHWSDGKLSQVAE 859
Query: 1080 KEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILV 1139
KEIKG+CYS+ EFNGKLLASINSTVRLFEWT EKELRLECSHFNNIIAL+LK K DF+LV
Sbjct: 860 KEIKGSCYSLVEFNGKLLASINSTVRLFEWTAEKELRLECSHFNNIIALYLKTKSDFVLV 919
Query: 1140 GDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAA 1199
GDLMRSLTLLQYKTMEGSFEEI+RDYNPNWMTSIEILDD+ FLGAEN +NLFICQKDSAA
Sbjct: 920 GDLMRSLTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFICQKDSAA 979
Query: 1200 TSDEDRTHLQEVGTVHLVGD 1219
TS+++R +QEVG HL GD
Sbjct: 980 TSEDERQQMQEVGQFHL-GD 998
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
EGSLRIIRNGIGI+EHA IDLPGIKG+WAL +G N DNTLVLSFVG TR+LTL+G E
Sbjct: 384 EGSLRIIRNGIGIQEHASIDLPGIKGMWALKVGG-GNFDNTLVLSFVGQTRILTLNGEE 441
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 54/60 (90%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIAV+KFFR P +KKDLLF++T
Sbjct: 22 NFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAVIKFFRPPHEKKDLLFLLT 81
>gi|321478515|gb|EFX89472.1| hypothetical protein DAPPUDRAFT_303245 [Daphnia pulex]
Length = 1158
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/547 (67%), Positives = 450/547 (82%), Gaps = 5/547 (0%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGDLAG LFML+LEKEEKMDGT +V++ K+ELLGE+SIPECLTYLDNGVVF+GSR G
Sbjct: 270 RYLLGDLAGHLFMLVLEKEEKMDGTVTVRDIKIELLGEVSIPECLTYLDNGVVFIGSRFG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +PD+N +YV+VME+FTNLAPI+DM +VDL+RQGQGQLVTCSG +KEGSLRI
Sbjct: 330 DSQLVKLNVTPDDNNSYVTVMETFTNLAPIVDMTIVDLDRQGQGQLVTCSGAYKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKN--LDNTLVLSFVGHTRVLTLSGAEVEETE 258
IRNGIGI E A IDLPGIKGIWAL +GS N +D+T+VLSFVG TRVL L+G E+EETE
Sbjct: 390 IRNGIGIHEQASIDLPGIKGIWALKMGSSGNPSVDDTVVLSFVGQTRVLMLNGEEMEETE 449
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ G T+DQQTF+CGNV +VLQ+T + LIS +K ++S W PP+GK ++VV+CN Q
Sbjct: 450 IPGLTADQQTFFCGNVGKDSVLQITTGSVRLISVNTKQKLSEWTPPDGKMLNVVACNHGQ 509
Query: 319 VLCATGCDVYYLEVHG-SEIKQLAHRALEYEVACLDISPLS-NEETSSEPAKAQLAAVGL 376
VLCA G ++YYLE+ +++ H L+YEVACLD++P+S + ++ +KA++ AVGL
Sbjct: 510 VLCAAGRELYYLEMEDDTQVVLKTHVTLDYEVACLDLTPISIGSQQNTTVSKAEVCAVGL 569
Query: 377 WTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPAS 436
WTDISARLL LP+LEE KEPLGGEIIPRSILM FEG YLLVALGDGS+FYFS++P +
Sbjct: 570 WTDISARLLKLPTLEEFHKEPLGGEIIPRSILMALFEGTPYLLVALGDGSLFYFSMNPVT 629
Query: 437 GRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMC 496
L D+KKVTLGTQPTVL+ FRS ST NVFACSDRPTVIYSSNHKLVFSNVNL++V HMC
Sbjct: 630 KLLGDRKKVTLGTQPTVLRPFRSQSTVNVFACSDRPTVIYSSNHKLVFSNVNLKEVAHMC 689
Query: 497 SLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRI 556
LN+E+YPDSL LATD+ T GTIDEIQKLHIRTVPLGE+PRRIAYQE++QTFGVIT+R+
Sbjct: 690 PLNSEAYPDSLVLATDTAVTIGTIDEIQKLHIRTVPLGESPRRIAYQENTQTFGVITSRV 749
Query: 557 DIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTAN-QPADFNMEVEVHNLL 615
DI E+ G TP R SASTQAQ+ +SS+ + P ST+ S + A+ E+EV+NLL
Sbjct: 750 DIVESSGLTPARQSASTQAQSVSSSSSLGSAIKAPVSTRDSCGSGGGAEIGQEIEVYNLL 809
Query: 616 IIDQNTF 622
I+DQ++F
Sbjct: 810 IVDQHSF 816
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 197/284 (69%), Positives = 242/284 (85%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL+VAKN R+EI+ VTPEGLRP+KE+ +YGKIAVMK ++ DKKD LFI+T R
Sbjct: 24 TSPNDLNLIVAKNYRLEIYLVTPEGLRPLKEVGIYGKIAVMKLYKSGNDKKDSLFILTAR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC G+ +N+EI+T+ GNV+D+IGKPSE GIIAIIDP+ RVIGLRLY+GL KII
Sbjct: 84 YNAMILECSGEGENMEIITRTQGNVADKIGKPSETGIIAIIDPDCRVIGLRLYDGLLKII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PLEKD+ E+KA +IR+EEL IQD+ FL+GC NPT++ IHQD +GRHVKT EISL++KEF
Sbjct: 144 PLEKDSSEIKAYNIRIEELCIQDIAFLYGCANPTVVIIHQDAHGRHVKTREISLRDKEFA 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
KT WKQDN+E EA++++PVPEP GGA+IIGQESI YH+G++YV +AP IIK ST+ CY K
Sbjct: 204 KTSWKQDNVETEAAMLLPVPEPYGGALIIGQESITYHNGQNYVTIAPPIIKQSTVTCYGK 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD NG RYLLGDLAG LFML+LEKEEKMDGT +V++ K+ELLGE
Sbjct: 264 VDPNGSRYLLGDLAGHLFMLVLEKEEKMDGTVTVRDIKIELLGE 307
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 157/237 (66%), Positives = 201/237 (84%), Gaps = 2/237 (0%)
Query: 984 PGSTKQSTANQP-ADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPN 1042
P ST+ S + A+ E+EV+NLLI+DQ++F +LHAHQ EYALS++S++ G+D N
Sbjct: 784 PVSTRDSCGSGGGAEIGQEIEVYNLLIVDQHSFAVLHAHQFMQNEYALSIVSTRLGDDVN 843
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINS 1102
Y+V+GTA+V PEE+EPKQGRI++F + DGKL +AEKE+KGACYS+ +FN K+LA+IN+
Sbjct: 844 PYYVVGTALVVPEESEPKQGRIVLFQWADGKLTTVAEKEVKGACYSLVDFNSKILAAINN 903
Query: 1103 TVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEIS 1162
VRL+EWT EKELRLECS+FN+IIAL+LK KGDFILVGDLMRS+TLLQYKTMEGSFEE++
Sbjct: 904 VVRLYEWTAEKELRLECSNFNHIIALYLKRKGDFILVGDLMRSITLLQYKTMEGSFEEMA 963
Query: 1163 RDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
RD NPNWM+++EILDD+ FLGAENS+NLF+CQKDSAAT++E+R L EVG HL GD
Sbjct: 964 RDSNPNWMSAVEILDDDTFLGAENSFNLFVCQKDSAATTEEERQQLTEVGRFHL-GD 1019
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 50/61 (81%), Gaps = 2/61 (3%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKN--LDNTLVLSFVGHTRVLTLSGA 58
EGSLRIIRNGIGI E A IDLPGIKGIWAL +GS N +D+T+VLSFVG TRVL L+G
Sbjct: 384 EGSLRIIRNGIGIHEQASIDLPGIKGIWALKMGSSGNPSVDDTVVLSFVGQTRVLMLNGE 443
Query: 59 E 59
E
Sbjct: 444 E 444
>gi|340714589|ref|XP_003395809.1| PREDICTED: DNA damage-binding protein 1-like [Bombus terrestris]
Length = 1141
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/543 (69%), Positives = 441/543 (81%), Gaps = 14/543 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+AG LFML +E+E+K DGT VK+ KVELLGEISIPEC+TYLDNGV+FVGSR G
Sbjct: 273 RYLLGDMAGHLFMLFVEQEKKPDGTQVVKDLKVELLGEISIPECITYLDNGVIFVGSRFG 332
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKL DENG+Y ME+FTNLAPIIDM VVDLERQGQGQ+VTCSG FKEGSLRI
Sbjct: 333 DSQLVKLITKADENGSYCVPMETFTNLAPIIDMAVVDLERQGQGQMVTCSGAFKEGSLRI 392
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGIEEHA IDLPGIKG+WAL +G N DNTLVLSFVG TR+LTL+G EVEET++
Sbjct: 393 IRNGIGIEEHASIDLPGIKGMWALKVGG-GNFDNTLVLSFVGQTRILTLNGEEVEETDIP 451
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +D+QTF+ GNV +Q+TP++A LIS E+K VS WEP N ++ISVV+CN QVL
Sbjct: 452 GFVADEQTFHTGNVTNDLFIQITPTSARLISHETKTVVSEWEPENKRTISVVACNGTQVL 511
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
CATG D++Y+E+ +I L+YEVACLDISPL +A++AAVGLWT I
Sbjct: 512 CATGNDLFYMEISYGQIVPKGFATLQYEVACLDISPLDGH------TEAKIAAVGLWTHI 565
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
S R+L+LP+LEE+ KE LGGEIIPRSILMTCFEG+ YLL ALGDGSM+YF+L +G L+
Sbjct: 566 SVRILTLPALEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLHKQNGILS 625
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
DKKKVTLGTQPTVL+TFRSL TTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLNA
Sbjct: 626 DKKKVTLGTQPTVLRTFRSLFTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNA 685
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
ESYPDSLALATDST T GTIDEIQKLHIRTVPLGE+PRRIAYQESSQTFGVIT R+DIQ+
Sbjct: 686 ESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDIQD 745
Query: 561 ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQN 620
+ G + VR +++ +TSS+ SY KP T + +D E+EVHNLLIIDQ+
Sbjct: 746 SSGVSIVR-HSASTQAASTSSSSHIASYNKP------TGHTASDICQEIEVHNLLIIDQH 798
Query: 621 TFE 623
TFE
Sbjct: 799 TFE 801
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/284 (73%), Positives = 245/284 (86%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIAV+KFFR P +KKDLLF++T R
Sbjct: 27 TSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAVVKFFRPPHEKKDLLFLLTTR 86
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC G+ +N+EI+TKAHGNV+DRIGK SE GI A+IDP+ARVIGLRLY+GLFKII
Sbjct: 87 YNAMILECIGEGENIEIITKAHGNVADRIGKASETGIKAVIDPKARVIGLRLYDGLFKII 146
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KDN ELKASSIRMEE ++QDV FLHGC NPT+I IHQD+NGRHVKTHEISL++KEF
Sbjct: 147 PLDKDNPELKASSIRMEEHQVQDVNFLHGCANPTLILIHQDINGRHVKTHEISLRDKEFV 206
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PW+QDN+E EA +VIPVP P+ GAIIIGQESILYH G +YVAV P IIK STI CYAK
Sbjct: 207 KVPWRQDNVEREAMIVIPVPSPICGAIIIGQESILYHDGNTYVAVVPPIIKQSTITCYAK 266
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD G RYLLGD+AG LFML +E+E+K DGT VK+ KVELLGE
Sbjct: 267 VDNQGLRYLLGDMAGHLFMLFVEQEKKPDGTQVVKDLKVELLGE 310
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/231 (75%), Positives = 204/231 (88%), Gaps = 1/231 (0%)
Query: 989 QSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLG 1048
+ T + +D E+EVHNLLIIDQ+TFE+LHAH L P EYALSLIS+K GEDP +Y+++G
Sbjct: 774 KPTGHTASDICQEIEVHNLLIIDQHTFEVLHAHMLMPTEYALSLISTKLGEDPTSYYIVG 833
Query: 1049 TAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFE 1108
TA+VHP+E EPK GRI+++H+ DGKL Q+AEKEIKG+CYS+ EFNGKLLASINSTVRLFE
Sbjct: 834 TALVHPDETEPKMGRILLYHWSDGKLTQVAEKEIKGSCYSLTEFNGKLLASINSTVRLFE 893
Query: 1109 WTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPN 1168
WT EKELRLECSHFNNIIAL+LK KGDFILVGDLMRSLTLLQYKTMEG FEEI+RDYNPN
Sbjct: 894 WTAEKELRLECSHFNNIIALYLKTKGDFILVGDLMRSLTLLQYKTMEGCFEEIARDYNPN 953
Query: 1169 WMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
WMT+IEILDD+ FLGAEN +NLF+CQKDSAATS+++R +QEVG HL GD
Sbjct: 954 WMTAIEILDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEVGQFHL-GD 1003
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIAV+KFFR P +KKDLLF++T
Sbjct: 25 NFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAVVKFFRPPHEKKDLLFLLT 84
Query: 685 QRTDLNLV--VAKNNRIEIHT 703
R + ++ + + IEI T
Sbjct: 85 TRYNAMILECIGEGENIEIIT 105
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
EGSLRIIRNGIGIEEHA IDLPGIKG+WAL +G N DNTLVLSFVG TR+LTL+G E
Sbjct: 387 EGSLRIIRNGIGIEEHASIDLPGIKGMWALKVGG-GNFDNTLVLSFVGQTRILTLNGEE 444
>gi|380025901|ref|XP_003696702.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
[Apis florea]
Length = 1141
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/543 (69%), Positives = 441/543 (81%), Gaps = 14/543 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+AG LFML +E+E+K DGT VK+ KVELLGEISIPEC+TYLDNGV+FVGSRLG
Sbjct: 273 RYLLGDMAGHLFMLFVEQEKKTDGTQVVKDLKVELLGEISIPECITYLDNGVIFVGSRLG 332
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKL DENG+Y ME+FTNLAPI+DM VVDLERQGQGQ+VTCSG FKEGSLRI
Sbjct: 333 DSQLVKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRI 392
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGIEEHA IDLPGIKG+WAL IG N DNTLVLSFVG TR+LTL+G EVEET++
Sbjct: 393 IRNGIGIEEHASIDLPGIKGMWALKIGG-GNFDNTLVLSFVGQTRILTLNGEEVEETDIP 451
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +D+QTF+ GNV +Q+TP++A LIS E+K VS WEP N ++ISVV+CN QVL
Sbjct: 452 GFVADEQTFHTGNVTNDLFIQITPTSARLISYETKTVVSEWEPENKRTISVVACNGTQVL 511
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
CATG D++YLE+ +I L+YEVACLDISPL +A++AAVGLWT I
Sbjct: 512 CATGNDLFYLEISCGQILPKGFTTLQYEVACLDISPLDGN------TEAKIAAVGLWTHI 565
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
S +L+LP+LEE+ KE LGGEIIPRSILMTCFEG+ YLL ALGDGSM+YF+L +G L+
Sbjct: 566 SVHILTLPALEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLHKQNGILS 625
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
DKKKVTLGTQPTVL+TFRSL TTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLNA
Sbjct: 626 DKKKVTLGTQPTVLRTFRSLFTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNA 685
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
ESYPDSLALATDST T GTIDEIQKLHIRTVPLGE+PRRIAYQESSQTFGVIT R+DIQ+
Sbjct: 686 ESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDIQD 745
Query: 561 ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQN 620
+ G + VR +++ +TSS+ SY KP T + +D E+EVHNLLIIDQ+
Sbjct: 746 SSGVSIVR-HSASTQAASTSSSSHIASYNKP------TGHTASDICQEIEVHNLLIIDQH 798
Query: 621 TFE 623
TFE
Sbjct: 799 TFE 801
Score = 441 bits (1134), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/284 (73%), Positives = 245/284 (86%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIAV+KFFR P +KKDLLF++T R
Sbjct: 27 TSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAVVKFFRPPHEKKDLLFLLTTR 86
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC G+ +N+EI+TKAHGNV+DRIGK SE GI A+IDP+ARVIGLRLY+GLFKII
Sbjct: 87 YNAMILECIGEGENIEIITKAHGNVADRIGKASETGIKAVIDPKARVIGLRLYDGLFKII 146
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KDN ELKASSIRMEE ++QDV FLHGC NPT+I IHQD+NGRHVKTHEISL++KEF
Sbjct: 147 PLDKDNPELKASSIRMEEHQVQDVNFLHGCANPTLILIHQDINGRHVKTHEISLRDKEFV 206
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PW+QDN+E EA +VIPVP P+ GAIIIGQESILYH G +YVAV P IIK STI CYAK
Sbjct: 207 KIPWRQDNVEREAMIVIPVPSPICGAIIIGQESILYHDGNTYVAVVPPIIKQSTITCYAK 266
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD G RYLLGD+AG LFML +E+E+K DGT VK+ KVELLGE
Sbjct: 267 VDNQGLRYLLGDMAGHLFMLFVEQEKKTDGTQVVKDLKVELLGE 310
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/231 (74%), Positives = 203/231 (87%), Gaps = 1/231 (0%)
Query: 989 QSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLG 1048
+ T + +D E+EVHNLLIIDQ+TFE+LHAH L P EYALSLIS+K GEDP +Y+++G
Sbjct: 774 KPTGHTASDICQEIEVHNLLIIDQHTFEVLHAHMLMPTEYALSLISTKLGEDPTSYYIVG 833
Query: 1049 TAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFE 1108
TA+VHP+E EPK GRI+++H+ DGKL Q+AEKE KG+CYS+ EFNGKLLASINSTVRLFE
Sbjct: 834 TALVHPDETEPKMGRILLYHWSDGKLTQVAEKEXKGSCYSLTEFNGKLLASINSTVRLFE 893
Query: 1109 WTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPN 1168
WT EKELRLECSHFNNIIAL+LK KGDFILVGDLMRSLTLLQYKTMEG FEEI+RDYNPN
Sbjct: 894 WTAEKELRLECSHFNNIIALYLKSKGDFILVGDLMRSLTLLQYKTMEGCFEEIARDYNPN 953
Query: 1169 WMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
WMT+IEILDD+ FLGAEN +NLF+CQKDSAATS+++R +QEVG HL GD
Sbjct: 954 WMTAIEILDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEVGQFHL-GD 1003
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIAV+KFFR P +KKDLLF++T
Sbjct: 25 NFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAVVKFFRPPHEKKDLLFLLT 84
Query: 685 QRTDLNLV--VAKNNRIEIHT 703
R + ++ + + IEI T
Sbjct: 85 TRYNAMILECIGEGENIEIIT 105
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
EGSLRIIRNGIGIEEHA IDLPGIKG+WAL IG N DNTLVLSFVG TR+LTL+G E
Sbjct: 387 EGSLRIIRNGIGIEEHASIDLPGIKGMWALKIGG-GNFDNTLVLSFVGQTRILTLNGEE 444
>gi|328788389|ref|XP_396048.3| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Apis
mellifera]
Length = 1141
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/543 (69%), Positives = 441/543 (81%), Gaps = 14/543 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+AG LFML +E+E+K DGT VK+ KVELLGEISIPEC+TYLDNGV+FVGSRLG
Sbjct: 273 RYLLGDMAGHLFMLFVEQEKKADGTQVVKDLKVELLGEISIPECITYLDNGVIFVGSRLG 332
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKL DENG+Y ME+FTNLAPI+DM VVDLERQGQGQ+VTCSG FKEGSLRI
Sbjct: 333 DSQLVKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRI 392
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGIEEHA IDLPGIKG+WAL IG N DNTLVLSFVG TR+LTL+G EVEET++
Sbjct: 393 IRNGIGIEEHASIDLPGIKGMWALKIGG-GNFDNTLVLSFVGQTRILTLNGEEVEETDIP 451
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +D+QTF+ GNV +Q+TP++A LIS E+K VS WEP N ++ISVV+CN QVL
Sbjct: 452 GFVADEQTFHTGNVTNDLFIQITPTSARLISYETKTVVSEWEPENKRTISVVACNGTQVL 511
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
CATG D++YLE+ +I L+YEVACLDISPL +A++AAVGLWT I
Sbjct: 512 CATGNDLFYLEISCGQILPKGFTTLQYEVACLDISPLDGN------TEAKIAAVGLWTHI 565
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
S +L+LP+LEE+ KE LGGEIIPRSILMTCFEG+ YLL ALGDGSM+YF+L +G L+
Sbjct: 566 SVHILTLPALEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLHKQNGILS 625
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
DKKKVTLGTQPTVL+TFRSL TTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLNA
Sbjct: 626 DKKKVTLGTQPTVLRTFRSLFTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNA 685
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
ESYPDSLALATDST T GTIDEIQKLHIRTVPLGE+PRRIAYQESSQTFGVIT R+DIQ+
Sbjct: 686 ESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDIQD 745
Query: 561 ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQN 620
+ G + VR +++ +TSS+ SY KP T + +D E+EVHNLLIIDQ+
Sbjct: 746 SSGVSIVR-HSASTQAASTSSSSHIASYNKP------TGHTASDICQEIEVHNLLIIDQH 798
Query: 621 TFE 623
TFE
Sbjct: 799 TFE 801
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/284 (73%), Positives = 245/284 (86%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIAV+KFFR P +KKDLLF++T R
Sbjct: 27 TSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAVVKFFRPPHEKKDLLFLLTTR 86
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC G+ +N+EI+TKAHGNV+DRIGK SE GI A+IDP+ARVIGLRLY+GLFKII
Sbjct: 87 YNAMILECIGEGENIEIITKAHGNVADRIGKASETGIKAVIDPKARVIGLRLYDGLFKII 146
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KDN ELKASSIRMEE ++QDV FLHGC NPT+I IHQD+NGRHVKTHEISL++KEF
Sbjct: 147 PLDKDNPELKASSIRMEEHQVQDVNFLHGCANPTLILIHQDINGRHVKTHEISLRDKEFV 206
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PW+QDN+E EA +VIPVP P+ GAIIIGQESILYH G +YVAV P IIK STI CYAK
Sbjct: 207 KIPWRQDNVEREAMIVIPVPSPICGAIIIGQESILYHDGNTYVAVVPPIIKQSTITCYAK 266
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD G RYLLGD+AG LFML +E+E+K DGT VK+ KVELLGE
Sbjct: 267 VDNQGLRYLLGDMAGHLFMLFVEQEKKADGTQVVKDLKVELLGE 310
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/231 (75%), Positives = 204/231 (88%), Gaps = 1/231 (0%)
Query: 989 QSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLG 1048
+ T + +D E+EVHNLLIIDQ+TFE+LHAH L P EYALSLIS+K GEDP +Y+++G
Sbjct: 774 KPTGHTASDICQEIEVHNLLIIDQHTFEVLHAHMLMPTEYALSLISTKLGEDPTSYYIVG 833
Query: 1049 TAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFE 1108
TA+VHP+E EPK GRI+++H+ DGKL Q+AEKEIKG+CYS+ EFNGKLLASINSTVRLFE
Sbjct: 834 TALVHPDETEPKMGRILLYHWSDGKLTQVAEKEIKGSCYSLTEFNGKLLASINSTVRLFE 893
Query: 1109 WTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPN 1168
WT EKELRLECSHFNNIIAL+LK KGDFILVGDLMRSLTLLQYKTMEG FEEI+RDYNPN
Sbjct: 894 WTAEKELRLECSHFNNIIALYLKSKGDFILVGDLMRSLTLLQYKTMEGCFEEIARDYNPN 953
Query: 1169 WMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
WMT+IEILDD+ FLGAEN +NLF+CQKDSAATS+++R +QEVG HL GD
Sbjct: 954 WMTAIEILDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEVGQFHL-GD 1003
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIAV+KFFR P +KKDLLF++T
Sbjct: 25 NFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAVVKFFRPPHEKKDLLFLLT 84
Query: 685 QRTDLNLV--VAKNNRIEIHT 703
R + ++ + + IEI T
Sbjct: 85 TRYNAMILECIGEGENIEIIT 105
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
EGSLRIIRNGIGIEEHA IDLPGIKG+WAL IG N DNTLVLSFVG TR+LTL+G E
Sbjct: 387 EGSLRIIRNGIGIEEHASIDLPGIKGMWALKIGG-GNFDNTLVLSFVGQTRILTLNGEE 444
>gi|350410909|ref|XP_003489174.1| PREDICTED: DNA damage-binding protein 1-like [Bombus impatiens]
Length = 1141
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/543 (69%), Positives = 442/543 (81%), Gaps = 14/543 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+AG LFML +E+E+K DGT VK+ KVELLGEISIPEC+TYLDNGV+FVGSRLG
Sbjct: 273 RYLLGDMAGHLFMLFVEQEKKPDGTQVVKDLKVELLGEISIPECITYLDNGVIFVGSRLG 332
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKL DENG+Y ME+FTNLAPI+DM VVDLERQGQGQ+VTCSG FKEGSLRI
Sbjct: 333 DSQLVKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRI 392
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGIEEHA IDLPGIKG+WAL +G N DNTLVLSFVG TR+LTL+G EVEET++
Sbjct: 393 IRNGIGIEEHASIDLPGIKGMWALKVGG-GNFDNTLVLSFVGQTRILTLNGEEVEETDIP 451
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +D+QTF+ GNV +Q+TP++A LIS E+K VS WEP N ++ISVV+CN QVL
Sbjct: 452 GFVADEQTFHTGNVTNDLFIQITPTSARLISHETKTVVSEWEPENKRTISVVACNGTQVL 511
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
CATG D++Y+E+ +I L+YEVACLDISPL +A++AAVGLWT I
Sbjct: 512 CATGNDLFYMEISCGQIVPKGFATLQYEVACLDISPLDGH------TEAKIAAVGLWTHI 565
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
S R+L+LP+LEE+ KE LGGEIIPRSILMTCFEG+ YLL ALGDGSM+YF+L +G L+
Sbjct: 566 SVRILTLPALEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLHKQNGILS 625
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
DKKKVTLGTQPTVL+TFRSL TTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLNA
Sbjct: 626 DKKKVTLGTQPTVLRTFRSLFTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNA 685
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
ESYPDSLALATDST T GTIDEIQKLHIRTVPLGE+PRRIAYQESSQTFGVIT R+DIQ+
Sbjct: 686 ESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDIQD 745
Query: 561 ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQN 620
+ G + VR +++ +TSS+ SY KP T + +D E+EVHNLLIIDQ+
Sbjct: 746 SSGVSIVR-HSASTQAASTSSSSHIASYNKP------TGHTASDICQEIEVHNLLIIDQH 798
Query: 621 TFE 623
TFE
Sbjct: 799 TFE 801
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/284 (73%), Positives = 245/284 (86%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIAV+KFFR P +KKDLLF++T R
Sbjct: 27 TSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAVVKFFRPPHEKKDLLFLLTTR 86
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC G+ +N+EI+TKAHGNV+DRIGK SE GI A+IDP+ARVIGLRLY+GLFKII
Sbjct: 87 YNAMILECIGEGENIEIITKAHGNVADRIGKASETGIKAVIDPKARVIGLRLYDGLFKII 146
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KDN ELKASSIRMEE ++QDV FLHGC NPT+I IHQD+NGRHVKTHEISL++KEF
Sbjct: 147 PLDKDNPELKASSIRMEEHQVQDVNFLHGCANPTLILIHQDINGRHVKTHEISLRDKEFV 206
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PW+QDN+E EA +VIPVP P+ GAIIIGQESILYH G +YVAV P IIK STI CYAK
Sbjct: 207 KVPWRQDNVEREAMIVIPVPSPICGAIIIGQESILYHDGNTYVAVVPPIIKQSTITCYAK 266
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD G RYLLGD+AG LFML +E+E+K DGT VK+ KVELLGE
Sbjct: 267 VDNQGLRYLLGDMAGHLFMLFVEQEKKPDGTQVVKDLKVELLGE 310
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/231 (75%), Positives = 204/231 (88%), Gaps = 1/231 (0%)
Query: 989 QSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLG 1048
+ T + +D E+EVHNLLIIDQ+TFE+LHAH L P EYALSLIS+K GEDP +Y+++G
Sbjct: 774 KPTGHTASDICQEIEVHNLLIIDQHTFEVLHAHMLMPTEYALSLISTKLGEDPTSYYIVG 833
Query: 1049 TAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFE 1108
TA+VHP+E EPK GRI+++H+ DGKL Q+AEKEIKG+CYS+ EFNGKLLASINSTVRLFE
Sbjct: 834 TALVHPDETEPKMGRILLYHWSDGKLTQVAEKEIKGSCYSLTEFNGKLLASINSTVRLFE 893
Query: 1109 WTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPN 1168
WT EKELRLECSHFNNIIAL+LK KGDFILVGDLMRSLTLLQYKTMEG FEEI+RDYNPN
Sbjct: 894 WTAEKELRLECSHFNNIIALYLKTKGDFILVGDLMRSLTLLQYKTMEGCFEEIARDYNPN 953
Query: 1169 WMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
WMT+IEILDD+ FLGAEN +NLF+CQKDSAATS+++R +QEVG HL GD
Sbjct: 954 WMTAIEILDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEVGQFHL-GD 1003
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIAV+KFFR P +KKDLLF++T
Sbjct: 25 NFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAVVKFFRPPHEKKDLLFLLT 84
Query: 685 QRTDLNLV--VAKNNRIEIHT 703
R + ++ + + IEI T
Sbjct: 85 TRYNAMILECIGEGENIEIIT 105
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
EGSLRIIRNGIGIEEHA IDLPGIKG+WAL +G N DNTLVLSFVG TR+LTL+G E
Sbjct: 387 EGSLRIIRNGIGIEEHASIDLPGIKGMWALKVGG-GNFDNTLVLSFVGQTRILTLNGEE 444
>gi|58383228|ref|XP_312466.2| AGAP002472-PA [Anopheles gambiae str. PEST]
gi|55242305|gb|EAA08181.2| AGAP002472-PA [Anopheles gambiae str. PEST]
Length = 1138
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/546 (67%), Positives = 434/546 (79%), Gaps = 19/546 (3%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLG++AG LFM+ LE EE G +V++ KVELLGEI+IPEC+TYLDNGV+F+GSR G
Sbjct: 270 RYLLGNMAGNLFMMFLETEENAKGQTTVRDIKVELLGEITIPECITYLDNGVLFIGSRHG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN + +NG YV +ME+FTNLAPI+DM VVDLERQGQGQ++TCSG FKEGSLRI
Sbjct: 330 DSQLVKLNTTAGDNGAYVMLMETFTNLAPIVDMCVVDLERQGQGQMITCSGSFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIG---SPKNLDNTLVLSFVGHTRVLTLSGAEVEET 257
IRNGIGI+EHACIDLPGIKG+WAL +G SP DNTL+LSFVGHTRVL LSG EVEET
Sbjct: 390 IRNGIGIQEHACIDLPGIKGMWALRVGIDDSP--YDNTLILSFVGHTRVLMLSGDEVEET 447
Query: 258 EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKN 317
E+ G DQQTFYC NV +LQVTPS+A LIS ++KA + W+PP+ K I VV N
Sbjct: 448 EIAGILGDQQTFYCANVSHGQILQVTPSSARLISCDNKAMICEWKPPDNKRIGVVGANTT 507
Query: 318 QVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
Q++CA+ DVYY+E+ +++ L YEVACLD+SPL + T SE AVGLW
Sbjct: 508 QIVCASAQDVYYVEIGDGKLEYKGQTTLSYEVACLDVSPLEDNATRSE-----FVAVGLW 562
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDISA +L +P+LE + KE LGGEIIPRSILM FEG YLL ALGDGSM+YF L+ A+G
Sbjct: 563 TDISACVLKVPTLELLHKEKLGGEIIPRSILMAAFEGINYLLCALGDGSMYYFVLNKATG 622
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
LT++KKVTLGTQPT+LKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCS
Sbjct: 623 CLTEQKKVTLGTQPTILKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCS 682
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
LNAE+Y DSLALAT ++ FGTIDEIQKLHIRTVPLGE+PRRIAYQE+SQTFGVIT R+D
Sbjct: 683 LNAEAYQDSLALATRNSVIFGTIDEIQKLHIRTVPLGESPRRIAYQEASQTFGVITFRMD 742
Query: 558 IQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLII 617
+Q++ G TP R SASTQ N T S S + +KPG++ +F EVEVHNLLII
Sbjct: 743 VQDSSGLTPARQSASTQTNNITQS--SGMGLLKPGASN-------TEFGQEVEVHNLLII 793
Query: 618 DQNTFE 623
DQNTFE
Sbjct: 794 DQNTFE 799
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/284 (67%), Positives = 240/284 (84%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL+VAK++R+EI+ VTPEGLRP+KEI + GKIAVMK FR + KDL+FI+T R
Sbjct: 24 TSPTDLNLIVAKSSRLEIYLVTPEGLRPIKEIGINGKIAVMKLFRPAEETKDLIFILTHR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMIL+C D++EI+TKAHGNV+DR+GKP+E GI+A+IDP+ARVIG+RLY GLFKII
Sbjct: 84 YNAMILQCAVQGDDIEIITKAHGNVADRVGKPAETGILAVIDPKARVIGMRLYEGLFKII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KD ELKA+S+RMEE+ +QDV+FL+G +PT+I IHQD+NGRH+KTHEISLK+KEFT
Sbjct: 144 PLDKDTNELKATSLRMEEMHVQDVEFLYGTTHPTLIVIHQDINGRHIKTHEISLKDKEFT 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++I VP PLGGAI+IGQESI+YH G SYVAVAP IIK STI CYA+
Sbjct: 204 KIAWKQDNVETEATMLIAVPMPLGGAIVIGQESIVYHDGDSYVAVAPAIIKQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+D+ G RYLLG++AG LFM+ LE EE G +V++ KVELLGE
Sbjct: 264 IDSKGLRYLLGNMAGNLFMMFLETEENAKGQTTVRDIKVELLGE 307
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 161/247 (65%), Positives = 202/247 (81%), Gaps = 8/247 (3%)
Query: 973 VVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSL 1032
+ + S + +KPG++ +F EVEVHNLLIIDQNTFE+LHAHQ EYALSL
Sbjct: 763 ITQSSGMGLLKPGASN-------TEFGQEVEVHNLLIIDQNTFEVLHAHQFMQTEYALSL 815
Query: 1033 ISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEF 1092
+S+K G DPNTYF++GT +V+PEE EPK GRIII+ Y D +L+ +++KE+KGACYS+ EF
Sbjct: 816 MSAKLGNDPNTYFIVGTGLVNPEEPEPKTGRIIIYRYADNELKMVSDKEVKGACYSLVEF 875
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG++LA INSTVRL+EWT++K+LRLECSHFNN++AL+ K KGDFILVGDLMRS+TLLQYK
Sbjct: 876 NGRVLACINSTVRLYEWTDDKDLRLECSHFNNVLALYCKTKGDFILVGDLMRSITLLQYK 935
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVG 1212
MEGSFEEI+RDY PNWMT++EILDD+ FLGA+NS NLF+C KDSAAT+DE+R + EV
Sbjct: 936 QMEGSFEEIARDYQPNWMTAVEILDDDAFLGADNSNNLFVCLKDSAATTDEERQQMPEVA 995
Query: 1213 TVHLVGD 1219
HL GD
Sbjct: 996 QFHL-GD 1001
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 53/62 (85%), Gaps = 5/62 (8%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIG---SPKNLDNTLVLSFVGHTRVLTLSG 57
EGSLRIIRNGIGI+EHACIDLPGIKG+WAL +G SP DNTL+LSFVGHTRVL LSG
Sbjct: 384 EGSLRIIRNGIGIQEHACIDLPGIKGMWALRVGIDDSP--YDNTLILSFVGHTRVLMLSG 441
Query: 58 AE 59
E
Sbjct: 442 DE 443
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL+VAK++R+EI+ VTPEGLRP+KEI + GKIAVMK FR + KDL+FI+T
Sbjct: 22 NFTSPTDLNLIVAKSSRLEIYLVTPEGLRPIKEIGINGKIAVMKLFRPAEETKDLIFILT 81
Query: 685 QRTDLNLV--VAKNNRIEIHT 703
R + ++ + + IEI T
Sbjct: 82 HRYNAMILQCAVQGDDIEIIT 102
>gi|383863765|ref|XP_003707350.1| PREDICTED: DNA damage-binding protein 1-like [Megachile rotundata]
Length = 1138
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/545 (70%), Positives = 446/545 (81%), Gaps = 21/545 (3%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+AG LFML LE+E+ DGT VK+ KVELLGEISIPEC+TYLDNGV+FVGSRLG
Sbjct: 273 RYLLGDMAGHLFMLFLEQEKNPDGTQVVKDLKVELLGEISIPECITYLDNGVIFVGSRLG 332
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KL DENG+Y ME+FTNLAPI+DM VVDLERQGQGQ+VTCSG FKEGSLRI
Sbjct: 333 DSQLIKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRI 392
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGIEEHA IDLPGIKG+WAL IG N DNTLVLSFVG TR+LTL+G EVEET++
Sbjct: 393 IRNGIGIEEHASIDLPGIKGMWALRIGG-GNFDNTLVLSFVGQTRILTLNGEEVEETDIP 451
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +D+QTF+ GNV +Q+TP++A LIS E+K VS WEP N ++ISVV+CN QVL
Sbjct: 452 GFVADEQTFHTGNVTNDLFIQITPTSARLISHETKTVVSEWEPENKRTISVVACNGTQVL 511
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
CATG D++Y+E+ +I L+YEVACLDISPL +A++AAVGLWTDI
Sbjct: 512 CATGNDLFYMEISCGQIVPKGFATLQYEVACLDISPLDGN------TEAKIAAVGLWTDI 565
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
S R+L+LP+LEE+ KE LGGEIIPRSILMTCFEG+ YLL ALGDGSM+YF+L +G L+
Sbjct: 566 SVRILTLPALEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLHKQNGILS 625
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
DKKKVTLGTQPTVL+TFRSLST NVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLNA
Sbjct: 626 DKKKVTLGTQPTVLRTFRSLSTINVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNA 685
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
ESYPDSLALATDST T GTIDEIQKLHIRTVPLGE+PRRIAYQE+SQTFGVIT R+DIQ+
Sbjct: 686 ESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQENSQTFGVITMRVDIQD 745
Query: 561 ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQP--ADFNMEVEVHNLLIID 618
+ G + VR SASTQA +T+S S+ ++ N+P +D + E+EVHNLLIID
Sbjct: 746 SSGVSIVRHSASTQAASTSS------------SSHIASHNKPTASDISQEIEVHNLLIID 793
Query: 619 QNTFE 623
Q+TFE
Sbjct: 794 QHTFE 798
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/284 (72%), Positives = 244/284 (85%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIAV+KFFR P +KKDLLF++T R
Sbjct: 27 TSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAVVKFFRPPHEKKDLLFLLTTR 86
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC G+ + +EI+TKAHGNV+DRIGK SE GI A+IDP+ARVIGLRLY+GLFKII
Sbjct: 87 YNAMILECIGEGEEIEIITKAHGNVADRIGKASETGIKAVIDPKARVIGLRLYDGLFKII 146
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KDN ELKASSIRM+E ++QDV FLHGC NPT+I IHQD+NGRHVKTHEISL++KEF
Sbjct: 147 PLDKDNPELKASSIRMDEQQVQDVNFLHGCANPTLILIHQDINGRHVKTHEISLRDKEFV 206
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PW+QDN+E EA++VIPVP P+ GAIIIGQESILYH G +YVAV P IIK STI CYAK
Sbjct: 207 KIPWRQDNVEREATMVIPVPSPICGAIIIGQESILYHDGTTYVAVVPPIIKQSTITCYAK 266
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD G RYLLGD+AG LFML LE+E+ DGT VK+ KVELLGE
Sbjct: 267 VDNQGLRYLLGDMAGHLFMLFLEQEKNPDGTQVVKDLKVELLGE 310
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/229 (75%), Positives = 206/229 (89%), Gaps = 3/229 (1%)
Query: 993 NQP--ADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
N+P +D + E+EVHNLLIIDQ+TFE+LHAH L P EYALSLIS+K GEDP Y+V+GTA
Sbjct: 773 NKPTASDISQEIEVHNLLIIDQHTFEVLHAHMLMPNEYALSLISTKLGEDPTFYYVVGTA 832
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+P+E EPK GRI+++H++DGKL Q+AEKEIKG+CYS+ EFNGKLLASINSTVRLFEWT
Sbjct: 833 LVNPDETEPKMGRILLYHWNDGKLTQVAEKEIKGSCYSLVEFNGKLLASINSTVRLFEWT 892
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELRLECSHFNNIIAL+LK KGDF+LVGDLMRSLTLLQYKTMEGSFEEI+RDYNPNWM
Sbjct: 893 AEKELRLECSHFNNIIALYLKTKGDFVLVGDLMRSLTLLQYKTMEGSFEEIARDYNPNWM 952
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
T++EILDD+ FLGAEN +NLF+CQKDSAATS+++R +QE+G HL GD
Sbjct: 953 TAVEILDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEIGQFHL-GD 1000
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
EGSLRIIRNGIGIEEHA IDLPGIKG+WAL IG N DNTLVLSFVG TR+LTL+G E
Sbjct: 387 EGSLRIIRNGIGIEEHASIDLPGIKGMWALRIGG-GNFDNTLVLSFVGQTRILTLNGEE 444
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 55/62 (88%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIAV+KFFR P +KKDLLF++T
Sbjct: 25 NFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAVVKFFRPPHEKKDLLFLLT 84
Query: 685 QR 686
R
Sbjct: 85 TR 86
>gi|322787057|gb|EFZ13281.1| hypothetical protein SINV_13198 [Solenopsis invicta]
Length = 986
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/543 (69%), Positives = 440/543 (81%), Gaps = 15/543 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+AG LFML LE+E+K DGT SVK+ KVELLGEISIPEC+TYLDNGV++VGSRLG
Sbjct: 270 RYLLGDMAGHLFMLFLEQEKKPDGTLSVKDLKVELLGEISIPECITYLDNGVIYVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KL DENG+Y ME+FTNLAPI+DM VVDLERQGQGQ+VTCSG FKEGSLRI
Sbjct: 330 DSQLIKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI+EHA IDLPGIKG+WAL +G + DNTLVLSFVG TR+LTL+G EVEET++
Sbjct: 390 IRNGIGIQEHASIDLPGIKGMWALKVGG-SHFDNTLVLSFVGQTRILTLNGEEVEETDIP 448
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +D+QTF+ GNV +Q+TP++ LIS ESK +S WEP N ++ISVV+CN QVL
Sbjct: 449 GFVADEQTFHTGNVTNDLFIQITPTSVRLISYESKMVISEWEPQNKRTISVVACNGTQVL 508
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
CATG D++Y+E+ ++I L++EVACLDISPL E A++ AVGLWTDI
Sbjct: 509 CATGNDLFYIEISCNQIVSKGFVTLQHEVACLDISPLDGNE-------AKIVAVGLWTDI 561
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
S R+L LP+LEE+ KE LGGEIIPRSILMTCFEG+ YLL ALGDGSM+YF L +G L+
Sbjct: 562 SVRILILPNLEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFILHKQTGILS 621
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
DKKKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLNA
Sbjct: 622 DKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNA 681
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
ESYPDSLALATDST T GTIDEIQKLHIRTVPLGE+PRRIAYQESSQTFGVIT R+D+QE
Sbjct: 682 ESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDVQE 741
Query: 561 ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQN 620
+ G + VR +++ +TSS+ S+ KP S Q E+EVHNLLIIDQ+
Sbjct: 742 SSGVSIVR-HSASTQATSTSSSSHIASHNKPSGHTASEIGQ------EIEVHNLLIIDQH 794
Query: 621 TFE 623
TFE
Sbjct: 795 TFE 797
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/284 (73%), Positives = 247/284 (86%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIA++KFFR P +KKDLLF++T R
Sbjct: 24 TSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAIIKFFRPPHEKKDLLFLLTTR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC G+ +++EI+TKAHGNV+DRIGK SE GI A+IDP+ARVIGLRLY+GLFKII
Sbjct: 84 YNAMILECIGEGEDIEIITKAHGNVADRIGKASETGIKAVIDPKARVIGLRLYDGLFKII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KDN ELKASSIRM+E ++QDV FLHGC NPT+I IHQD+NGRHVKTHEI+L++KEF+
Sbjct: 144 PLDKDNPELKASSIRMDEQQVQDVNFLHGCANPTLILIHQDINGRHVKTHEINLRDKEFS 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PW+QDN+E EA +VIPVP P+ GAIIIGQESILYH G SYVAV P IIK STI CYAK
Sbjct: 204 KIPWRQDNVEREAMMVIPVPSPMCGAIIIGQESILYHDGNSYVAVVPPIIKQSTITCYAK 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD G RYLLGD+AG LFML LE+E+K DGT SVK+ KVELLGE
Sbjct: 264 VDNQGLRYLLGDMAGHLFMLFLEQEKKPDGTLSVKDLKVELLGE 307
Score = 358 bits (919), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 161/217 (74%), Positives = 193/217 (88%)
Query: 989 QSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLG 1048
+ + + ++ E+EVHNLLIIDQ+TFE+LHAH L EYALSLIS++ GEDP +YFV+G
Sbjct: 770 KPSGHTASEIGQEIEVHNLLIIDQHTFEVLHAHTLMATEYALSLISTRLGEDPTSYFVVG 829
Query: 1049 TAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFE 1108
TA ++P+E EPK GRI+++H+ +GK Q+AEKEIKG+CYS+ EFNGKLLASINSTVRLFE
Sbjct: 830 TAFINPDETEPKMGRILLYHWSEGKFTQVAEKEIKGSCYSLVEFNGKLLASINSTVRLFE 889
Query: 1109 WTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPN 1168
WT EKELRLECSHFNNIIAL+LK KGDF+LVGDLMRSLTLLQYKTMEGSFEEI+RDYNPN
Sbjct: 890 WTAEKELRLECSHFNNIIALYLKTKGDFVLVGDLMRSLTLLQYKTMEGSFEEIARDYNPN 949
Query: 1169 WMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDR 1205
WMTSIEILDD+ FLGAEN +NLF+CQKDSAATS+++R
Sbjct: 950 WMTSIEILDDDTFLGAENCFNLFVCQKDSAATSEDER 986
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKIA++KFFR P +KKDLLF++T
Sbjct: 22 NFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAIIKFFRPPHEKKDLLFLLT 81
Query: 685 QRTDLNLV--VAKNNRIEIHT 703
R + ++ + + IEI T
Sbjct: 82 TRYNAMILECIGEGEDIEIIT 102
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
EGSLRIIRNGIGI+EHA IDLPGIKG+WAL +G + DNTLVLSFVG TR+LTL+G E
Sbjct: 384 EGSLRIIRNGIGIQEHASIDLPGIKGMWALKVGG-SHFDNTLVLSFVGQTRILTLNGEE 441
>gi|307205760|gb|EFN83990.1| DNA damage-binding protein 1 [Harpegnathos saltator]
Length = 1138
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/543 (69%), Positives = 445/543 (81%), Gaps = 14/543 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+AG LFML LE+E+K DGT VK+ KVELLGEISIPEC+TYLDNGV+FVGSRLG
Sbjct: 270 RYLLGDMAGHLFMLFLEQEKKPDGTQVVKDLKVELLGEISIPECITYLDNGVIFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KL DENG+Y ME+FTNLAPI+DM VVDLERQGQGQ+VTCSG FKEGSLRI
Sbjct: 330 DSQLIKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI+EHA IDLPGIKG+WAL +G N DNTLVLSFVG TR+LTL+G EVEET++
Sbjct: 390 IRNGIGIQEHASIDLPGIKGMWALKVGG-GNFDNTLVLSFVGQTRILTLNGEEVEETDIP 448
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +D+QTF+ GNV +Q+TP++A LIS E+K VS WEP N ++ISVV+CN QVL
Sbjct: 449 GFVADEQTFHTGNVTNDLFIQITPTSARLISHETKIVVSEWEPENKRTISVVACNGTQVL 508
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
CATG D++Y+E+ ++I L++EVACLDISPL ++A++ AVGLWTDI
Sbjct: 509 CATGNDLFYMEIICNQIVPKGFATLQHEVACLDISPLDG------ISEAKIVAVGLWTDI 562
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
S R+L+LP LEE+ KE LGGEIIPRSILMTCFEG+ YLL ALGDGSM+YF+L +G L+
Sbjct: 563 SVRILTLPGLEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLHKQNGILS 622
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
DKKKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLNA
Sbjct: 623 DKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNA 682
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
ESYPDSLALATDST T GTIDEIQKLHIRTVPLGE+PRRIAYQESSQTFGVIT R+D+QE
Sbjct: 683 ESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDVQE 742
Query: 561 ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQN 620
+ G + VR SASTQA +T+SS+ + G T ++ E+EVHNLLIIDQ+
Sbjct: 743 SSGVSIVRHSASTQAASTSSSSHIASHNKPSGHT-------ASEIGQEIEVHNLLIIDQH 795
Query: 621 TFE 623
TFE
Sbjct: 796 TFE 798
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/284 (72%), Positives = 245/284 (86%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YG+IAV+KFFR P +KKDLLF++T R
Sbjct: 24 TSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGRIAVVKFFRPPHEKKDLLFLLTTR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC G+ +++EI+TKAHGNV+DRIGK SE GI A+IDP+ARVIGLRLY+GLFKII
Sbjct: 84 YNAMILECIGEGEDIEIITKAHGNVADRIGKASETGIKAVIDPKARVIGLRLYDGLFKII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KDN ELKASSIRM+E ++QDV FLHGC NPT+I IHQD+NGRHVKTHEISL++KEF
Sbjct: 144 PLDKDNPELKASSIRMDEQQVQDVNFLHGCANPTLILIHQDINGRHVKTHEISLRDKEFV 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PW+QDN+E EA +VIPVP P+ GAIIIGQESILYH G +Y+AV P IIK STI CYAK
Sbjct: 204 KIPWRQDNVEREAMMVIPVPSPICGAIIIGQESILYHDGTTYIAVVPPIIKQSTITCYAK 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD G RYLLGD+AG LFML LE+E+K DGT VK+ KVELLGE
Sbjct: 264 VDNQGLRYLLGDMAGHLFMLFLEQEKKPDGTQVVKDLKVELLGE 307
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/231 (74%), Positives = 205/231 (88%), Gaps = 1/231 (0%)
Query: 989 QSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLG 1048
+ + + ++ E+EVHNLLIIDQ+TFE+LHAH L P EYALSLIS++ GEDP +YFV+G
Sbjct: 771 KPSGHTASEIGQEIEVHNLLIIDQHTFEVLHAHTLMPTEYALSLISTRLGEDPTSYFVVG 830
Query: 1049 TAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFE 1108
TA+++P+E EPK GRI+++H+ DGKL Q+AEKEIKG+CYS+ EFNGKLLASINSTVRLFE
Sbjct: 831 TALINPDETEPKMGRILLYHWSDGKLTQVAEKEIKGSCYSLVEFNGKLLASINSTVRLFE 890
Query: 1109 WTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPN 1168
WT EKELRLECSHFNNIIAL+LK KGDF+LVGDLMRSLTLLQYKTMEGSFEEI+RDYNPN
Sbjct: 891 WTAEKELRLECSHFNNIIALYLKTKGDFVLVGDLMRSLTLLQYKTMEGSFEEIARDYNPN 950
Query: 1169 WMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
WMTSIEILDD+ FLGAEN +NLF+CQKDSAATS+++R +QEVG HL GD
Sbjct: 951 WMTSIEILDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEVGQFHL-GD 1000
Score = 96.3 bits (238), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YG+IAV+KFFR P +KKDLLF++T
Sbjct: 22 NFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGRIAVVKFFRPPHEKKDLLFLLT 81
Query: 685 QRTDLNLV--VAKNNRIEIHT 703
R + ++ + + IEI T
Sbjct: 82 TRYNAMILECIGEGEDIEIIT 102
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
EGSLRIIRNGIGI+EHA IDLPGIKG+WAL +G N DNTLVLSFVG TR+LTL+G E
Sbjct: 384 EGSLRIIRNGIGIQEHASIDLPGIKGMWALKVGG-GNFDNTLVLSFVGQTRILTLNGEE 441
>gi|241260143|ref|XP_002404926.1| DNA repair protein xp-E, putative [Ixodes scapularis]
gi|215496735|gb|EEC06375.1| DNA repair protein xp-E, putative [Ixodes scapularis]
Length = 1148
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/544 (68%), Positives = 436/544 (80%), Gaps = 16/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+AGRLFMLLLE+E+KMDGT +VK+ K+E LGEI+I EC+TYLDNGVV+VGSRLG
Sbjct: 272 RYLLGDMAGRLFMLLLEREDKMDGTTTVKDLKLEFLGEITIAECMTYLDNGVVYVGSRLG 331
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KLN +E G+YV VME FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 332 DSQLIKLNSERNEQGSYVEVMEVFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 391
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKGIW L + + + DNTLVLSFVG TRVL LSG EVEETE+
Sbjct: 392 IRNGIGIHEHASIDLPGIKGIWPLRVNTDSSRDNTLVLSFVGQTRVLMLSGEEVEETELA 451
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF QQTF+CGNV ++QVT +A L+ ++K ++ W+PP GK+ISVV+CN+NQV+
Sbjct: 452 GFDISQQTFFCGNVRNNQLIQVTAAAVRLVDGKTKLLLNEWKPPGGKNISVVTCNQNQVV 511
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
CA +V+ LE+ +KQ ++ +E EVACLDI+PL++ K+ L AVGLWTDI
Sbjct: 512 CAVRQEVFCLEIADGTLKQTSNAEMENEVACLDITPLNDGS-----GKSDLCAVGLWTDI 566
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
S R+L LPSLE++ KE +GGEIIPRSILMT FEG YLL ALGDGS+FYF LD ++G ++
Sbjct: 567 SIRVLRLPSLEQLQKENIGGEIIPRSILMTTFEGVHYLLCALGDGSLFYFLLDASTGAVS 626
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVLKTF+SLST+NVFACSDRPTVIYSSNHKLVFSNVNL++VNHMC LN+
Sbjct: 627 DRKKVTLGTQPTVLKTFKSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCPLNS 686
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
E YPDSLALA D T GTIDEIQKLHIRTVPLGE RIAYQE++QTFGVIT R DIQ
Sbjct: 687 EGYPDSLALANDGTLLIGTIDEIQKLHIRTVPLGE---RIAYQEATQTFGVITIRNDIQG 743
Query: 561 ADGSTPVRPSASTQAQNTT-SSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
G TPVRPSASTQAQN T SST+SS+ KPG T + EVEVHNLLI+DQ
Sbjct: 744 TGGLTPVRPSASTQAQNVTYSSTMSSV--FKPG-----TGSGNDQLGQEVEVHNLLIVDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/286 (64%), Positives = 230/286 (80%), Gaps = 2/286 (0%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T D+NL++AKN R+EI+ V+PEGLRPVKEI +YG+I++MK FR P +KKDLLF +T +
Sbjct: 24 TSPNDINLILAKNTRLEIYVVSPEGLRPVKEIGIYGRISIMKLFRPPGEKKDLLFFLTAK 83
Query: 744 YNAMILEC--RGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFK 801
YNA ILEC G +EI+TKAHGN++D +PSE G I IIDPE RVIGLRLY+GLFK
Sbjct: 84 YNAAILECIQDGGDGGVEIITKAHGNIADSFSRPSETGNIGIIDPECRVIGLRLYDGLFK 143
Query: 802 IIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKE 861
+IPL++DN ELKA +IRMEEL +QD++FLHGC+ PTI+ +HQD RH+KT+EISLK+KE
Sbjct: 144 VIPLDRDNRELKAFNIRMEELTVQDMEFLHGCKTPTIVLLHQDSQARHMKTYEISLKDKE 203
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCY 921
F K PWKQD++E EA++VI VPEP A IGQESI YH+G V + P +I+ STIVCY
Sbjct: 204 FVKGPWKQDHVESEATIVIAVPEPFCDARCIGQESITYHNGDQDVVITPHLIRQSTIVCY 263
Query: 922 AKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
KVDANG RYLLGD+AGRLFMLLLE+E+KMDGT +VK+ K+E LGE
Sbjct: 264 GKVDANGSRYLLGDMAGRLFMLLLEREDKMDGTTTVKDLKLEFLGE 309
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 164/237 (69%), Positives = 196/237 (82%), Gaps = 5/237 (2%)
Query: 980 SYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGE 1039
S KPG T + EVEVHNLLI+DQ+TFE+LHAHQ EYA+S++S++ G
Sbjct: 769 SVFKPG-----TGSGNDQLGQEVEVHNLLIVDQHTFEVLHAHQFMQTEYAMSIVSTRLGS 823
Query: 1040 DPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLAS 1099
DPN YF++GTA+V P+E++PKQGRIIIFH+ DGKLQQ+AEKEIKGA YS+ EFNGKLLAS
Sbjct: 824 DPNVYFIVGTAIVLPDESDPKQGRIIIFHWVDGKLQQVAEKEIKGAPYSLLEFNGKLLAS 883
Query: 1100 INSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFE 1159
INSTVRLFEW E+EL ECSHFNNI+AL+LK KGDFILVGDLMRS++LL YK +EGSFE
Sbjct: 884 INSTVRLFEWNAERELHNECSHFNNILALYLKTKGDFILVGDLMRSMSLLAYKPLEGSFE 943
Query: 1160 EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
EI+RDY NWM ++EILDD+ FLGAE++ NLF+CQKDSAAT+DEDR HLQEVG HL
Sbjct: 944 EIARDYQTNWMCAVEILDDDTFLGAESTTNLFVCQKDSAATTDEDRQHLQEVGQFHL 1000
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 51/68 (75%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKGIW L + + + DNTLVLSFVG TRVL LSG E
Sbjct: 386 EGSLRIIRNGIGIHEHASIDLPGIKGIWPLRVNTDSSRDNTLVLSFVGQTRVLMLSGEEV 445
Query: 61 GFHLLRGF 68
L GF
Sbjct: 446 EETELAGF 453
>gi|91087281|ref|XP_975549.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270010588|gb|EFA07036.1| hypothetical protein TcasGA2_TC010010 [Tribolium castaneum]
Length = 1149
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/544 (67%), Positives = 438/544 (80%), Gaps = 6/544 (1%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+AG LFML LE + + DG VK+ KVELLGEI+ PEC+TYLDNGV+F+GSRLG
Sbjct: 270 RYLLGDMAGHLFMLFLEVDNRGDGNDVVKDLKVELLGEIATPECITYLDNGVLFIGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKL P+E+G+YV+VMESFTNLAPI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLTTKPNESGSYVTVMESFTNLAPILDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI+EHA IDLPGIKG+WAL + S DNTLVL+FVG TRVL+L+G EVEET++
Sbjct: 390 IRNGIGIQEHASIDLPGIKGMWALQVASDGRYDNTLVLAFVGQTRVLSLNGEEVEETDIA 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF SDQQTF+CGNV ++Q+TP +A LIS ++K ++ W+PP+ K+I+VV+CN Q++
Sbjct: 450 GFASDQQTFFCGNVIHEQIVQITPISARLISAQNKTLLAEWKPPSDKNIAVVACNTCQIV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
+TG +YY+E+H +E+ L+ EVACLDISPL + T+SE AVGLWTDI
Sbjct: 510 VSTGSILYYIEIHQNELIMKGVTTLDVEVACLDISPLGDGVTTSE-----YIAVGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
+AR+L +P L E KE LGGEIIPRS+LMTCFEGH YLL ALGDGSMFYF +G L+
Sbjct: 565 TARILRIPDLSEATKEYLGGEIIPRSVLMTCFEGHSYLLCALGDGSMFYFVFHKDTGTLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
DKK+VTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVN+++VNHMCSLNA
Sbjct: 625 DKKRVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNMKEVNHMCSLNA 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
E+YPDSLALATDS+ T GTIDEIQKLHIRTVPL E+P+RIAYQE SQTFGV+T RIDIQ+
Sbjct: 685 EAYPDSLALATDSSVTIGTIDEIQKLHIRTVPLQESPKRIAYQEESQTFGVLTARIDIQD 744
Query: 561 ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQST-ANQPADFNMEVEVHNLLIIDQ 619
+ G P RPSAST AQ+TTSS+ + + N D+ EVEVHNLLIIDQ
Sbjct: 745 STGLNPARPSASTMAQSTTSSSSVGSLSMSKSGSSSLIGGNIIPDYGQEVEVHNLLIIDQ 804
Query: 620 NTFE 623
+TFE
Sbjct: 805 HTFE 808
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/284 (73%), Positives = 243/284 (85%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL+VAKN ++EI+ VTPEGLRPVKE+ LYGK+AVMK FR +KKDLLFI+T R
Sbjct: 24 TSPGDLNLIVAKNTKLEIYLVTPEGLRPVKEVALYGKVAVMKLFRPQHEKKDLLFIVTMR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC D DNL+I+TKAHGNV+D+IGKPSE GI+A+IDP+ARVIGLRLY+GLFKII
Sbjct: 84 YNAMILECVNDADNLDIITKAHGNVADKIGKPSETGILAVIDPKARVIGLRLYDGLFKII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PLEKDN ELKAS+IR++EL++ DV+FLHGC NPT+I IHQDVNGRHVKTHEISL+EKEF
Sbjct: 144 PLEKDNSELKASNIRIDELQVHDVEFLHGCANPTLILIHQDVNGRHVKTHEISLREKEFV 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PW+QDN+E EAS++IPVP PLGGAIIIGQE+ILYH G + V VAP +IK STIVCYAK
Sbjct: 204 KVPWRQDNVETEASMIIPVPSPLGGAIIIGQENILYHDGITPVVVAPAVIKQSTIVCYAK 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD G RYLLGD+AG LFML LE + + DG VK+ KVELLGE
Sbjct: 264 VDPGGLRYLLGDMAGHLFMLFLEVDNRGDGNDVVKDLKVELLGE 307
Score = 366 bits (940), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 168/224 (75%), Positives = 201/224 (89%), Gaps = 2/224 (0%)
Query: 997 DFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISS-KFGEDPNTYFVLGTAVVHPE 1055
D+ EVEVHNLLIIDQ+TFE+LHAHQL EYA+S+IS+ + G D N Y+++GTA V+PE
Sbjct: 789 DYGQEVEVHNLLIIDQHTFEVLHAHQLMQQEYAMSIISTNRLGGDMNEYYIVGTATVNPE 848
Query: 1056 ENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKEL 1115
E+EPKQGRI+IF ++D KL Q++EKEIKGACYS+ EFNGKLLASINSTVRLFEWT EKEL
Sbjct: 849 ESEPKQGRILIFQWNDNKLTQVSEKEIKGACYSLAEFNGKLLASINSTVRLFEWTVEKEL 908
Query: 1116 RLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
RLECSHFNNI+ LFLK KGDFIL+GDLMRS+TLLQYKTMEGSFEEI+RDYNPNWMT++EI
Sbjct: 909 RLECSHFNNILTLFLKTKGDFILLGDLMRSMTLLQYKTMEGSFEEIARDYNPNWMTAVEI 968
Query: 1176 LDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
LDD++FLGAENS+N+F+CQKDSAAT+DE+R+ + EVG H VGD
Sbjct: 969 LDDDIFLGAENSFNIFVCQKDSAATTDEERSQMHEVGRFH-VGD 1011
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 55/70 (78%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI+EHA IDLPGIKG+WAL + S DNTLVL+FVG TRVL+L+G E
Sbjct: 384 EGSLRIIRNGIGIQEHASIDLPGIKGMWALQVASDGRYDNTLVLAFVGQTRVLSLNGEEV 443
Query: 61 GFHLLRGFSS 70
+ GF+S
Sbjct: 444 EETDIAGFAS 453
>gi|332030156|gb|EGI69950.1| DNA damage-binding protein 1 [Acromyrmex echinatior]
Length = 1138
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/543 (69%), Positives = 441/543 (81%), Gaps = 14/543 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+AG LFML LE+E+K DG+ VK+ KVELLGEISIPEC+TYLDNGV++VGSRLG
Sbjct: 270 RYLLGDMAGHLFMLFLEQEKKPDGSQVVKDLKVELLGEISIPECITYLDNGVIYVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KL DENG+Y ME+FTNLAPI+DM VVDLERQGQGQ+VTCSG FKEGSLRI
Sbjct: 330 DSQLIKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI+EHA +DLPGIKG+WAL +G + DNTLVLSFVG TR+LTL+G EVEET++
Sbjct: 390 IRNGIGIQEHASMDLPGIKGMWALKVGG-SHFDNTLVLSFVGQTRILTLNGEEVEETDIP 448
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +D+QTF+ GNV +Q+T ++ LIS E+K VS WEP N ++ISVV+CN QVL
Sbjct: 449 GFVADEQTFHTGNVTDDLFIQITSTSVRLISHENKIVVSEWEPQNKRTISVVACNGTQVL 508
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
CATG D++Y+E+ ++I L++EVACLDISPL +A++ AVGLWTDI
Sbjct: 509 CATGNDLFYIEIICNQIVSKGFVTLQHEVACLDISPLDGVN------EAKIVAVGLWTDI 562
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
S R+L+LP+LEE+ KE LGGEIIPRSILMTCFEG+ YLL ALGDGSM+YF L SG L+
Sbjct: 563 SVRILTLPNLEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFILHRQSGMLS 622
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
DKKKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLNA
Sbjct: 623 DKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNA 682
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
ESYPDSLALATDST T GTIDEIQKLHIRTVPLGE+PRRIAYQESSQTFGVIT R+D+QE
Sbjct: 683 ESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDVQE 742
Query: 561 ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQN 620
+ G + VR SASTQA +T+SS+ G T ++ E+EVHNLLIIDQ+
Sbjct: 743 SSGVSIVRHSASTQAASTSSSSHVVSHNKPSGHT-------ASEIGQEIEVHNLLIIDQH 795
Query: 621 TFE 623
TFE
Sbjct: 796 TFE 798
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/284 (72%), Positives = 245/284 (86%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKI+V+KFFR P +KKDLLF++T R
Sbjct: 24 TSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKISVIKFFRPPHEKKDLLFLLTTR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC G+ +++EI+TKAHGNV+DRIGK SE GI A+IDP+ARVIGLRLY+GLFKII
Sbjct: 84 YNAMILECIGEGEDIEIITKAHGNVADRIGKASETGIKAVIDPKARVIGLRLYDGLFKII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KDN ELKASSIRM+E ++QDV FLHGC NPT+I IHQD+NGRHVKTHEI+L++KEF
Sbjct: 144 PLDKDNPELKASSIRMDEQQVQDVNFLHGCANPTLILIHQDINGRHVKTHEINLRDKEFA 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PW+QDN+E EA +VIPVP P+ GAIIIGQESILYH G +YVAV P IIK STI CYAK
Sbjct: 204 KIPWRQDNVEREAMMVIPVPSPICGAIIIGQESILYHDGTTYVAVVPPIIKQSTITCYAK 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD G RYLLGD+AG LFML LE+E+K DG+ VK+ KVELLGE
Sbjct: 264 VDNQGLRYLLGDMAGHLFMLFLEQEKKPDGSQVVKDLKVELLGE 307
Score = 371 bits (953), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 169/231 (73%), Positives = 202/231 (87%), Gaps = 1/231 (0%)
Query: 989 QSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLG 1048
+ + + ++ E+EVHNLLIIDQ+TFE+LHAH L EYALSLIS+K GEDP +YFV+G
Sbjct: 771 KPSGHTASEIGQEIEVHNLLIIDQHTFEVLHAHTLMATEYALSLISTKLGEDPTSYFVVG 830
Query: 1049 TAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFE 1108
TA ++P+E EPK GRI+++H+ +GK Q+AEKEIKG+CYS+ EFNGKLLASINSTVRLFE
Sbjct: 831 TAFINPDETEPKMGRILLYHWSEGKFTQVAEKEIKGSCYSLVEFNGKLLASINSTVRLFE 890
Query: 1109 WTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPN 1168
WT EKELRLECSHFNNIIAL+LK KGDF+LVGDLMRSLTLLQYKTMEGSFEEI+RDYNPN
Sbjct: 891 WTAEKELRLECSHFNNIIALYLKTKGDFVLVGDLMRSLTLLQYKTMEGSFEEIARDYNPN 950
Query: 1169 WMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
WMTSIEILDD+ FLGAEN +NLF+CQKDSAATS+++R +QE+G HL GD
Sbjct: 951 WMTSIEILDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEIGQFHL-GD 1000
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++AKN R+EI+ VTPEGLRP+KE+ +YGKI+V+KFFR P +KKDLLF++T
Sbjct: 22 NFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKISVIKFFRPPHEKKDLLFLLT 81
Query: 685 QRTDLNLV--VAKNNRIEIHT 703
R + ++ + + IEI T
Sbjct: 82 TRYNAMILECIGEGEDIEIIT 102
Score = 93.2 bits (230), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
EGSLRIIRNGIGI+EHA +DLPGIKG+WAL +G + DNTLVLSFVG TR+LTL+G E
Sbjct: 384 EGSLRIIRNGIGIQEHASMDLPGIKGMWALKVGG-SHFDNTLVLSFVGQTRILTLNGEE 441
>gi|45383688|ref|NP_989547.1| DNA damage-binding protein 1 [Gallus gallus]
gi|82098863|sp|Q805F9.1|DDB1_CHICK RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=Damage-specific DNA-binding
protein 1; AltName: Full=UV-damaged DNA-binding factor
gi|28375613|dbj|BAC56999.1| damaged-DNA binding protein DDB p127 subunit [Gallus gallus]
gi|53130071|emb|CAG31438.1| hypothetical protein RCJMB04_6h2 [Gallus gallus]
Length = 1140
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/544 (67%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L S + +DN LVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDSHREMDNMLVLSFVGQTRVLMLNGEEVEETELT 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ PNGK+ISV SCN NQV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPNGKNISVASCNSNQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYLE+ E++Q+ +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLEIRPQELRQINCTEMEHEVACLDITPLGDTNGMSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLSLETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
A G+T +RPSASTQA +++ ST S STA F EVEVHNLLIIDQ
Sbjct: 745 ASGGTTALRPSASTQALSSSVSTSKLFS--------SSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 238/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGK AVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKTAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + + DN++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQNGDNIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL+++N ELKA +IR+EEL++ DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 169/227 (74%), Positives = 199/227 (87%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
STA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GT
Sbjct: 774 STAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGT 833
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
A+V+PEE EPKQGRI++FHY DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EW
Sbjct: 834 AMVYPEEAEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEW 893
Query: 1110 TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
T EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNW
Sbjct: 894 TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 953
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
M+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 954 MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHL 1000
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 50/68 (73%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L S + +DN LVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHREMDNMLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELTGF 451
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 58/81 (71%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGK AVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKTAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K N I +T
Sbjct: 82 AKYNACILEYKQNGDNIDIIT 102
>gi|427788481|gb|JAA59692.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
Length = 1156
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/557 (66%), Positives = 437/557 (78%), Gaps = 24/557 (4%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+AGRLFMLLLE+E+KMDGT +VK+ K+E LGEI+I EC+TYLDNGVV+VGSRLG
Sbjct: 270 RYLLGDMAGRLFMLLLEREDKMDGTTTVKDLKLEFLGEITIAECITYLDNGVVYVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KL+ ++ G++V +ME FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLIKLHAERNDQGSFVEIMEVFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIG--------------SPKNLDNTLVLSFVGHTRV 246
IRNGIGI EHA IDLPGIKG+W L +G DNTLVLSFV TRV
Sbjct: 390 IRNGIGIHEHASIDLPGIKGMWPLRVGPGVAPHGGDGRDPGDSAERDNTLVLSFVRQTRV 449
Query: 247 LTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNG 306
L LSG EVEETE+ GF + QQTF+CGNV + ++QVT +A L+ +++K ++ W+PP
Sbjct: 450 LMLSGEEVEETELAGFDTSQQTFFCGNVRNKQLIQVTAAAVRLVDSQTKQLLNEWKPPGA 509
Query: 307 KSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEP 366
++ISVV+CN++QV+CA +V+ LE+ + Q+++ LE EVACLDI+PLS +
Sbjct: 510 RNISVVTCNQSQVVCAVRKEVFCLEIGDGVLNQISNAELENEVACLDITPLS-----EKA 564
Query: 367 AKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGS 426
KA L AVGLWTDIS R+LSLPSL+++ KE +GGEIIPRSIL+T FEG YLL ALGDGS
Sbjct: 565 EKATLCAVGLWTDISIRILSLPSLQQLQKENIGGEIIPRSILITTFEGIHYLLCALGDGS 624
Query: 427 MFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSN 486
+FYF L+ +G LTD+KKVTLGTQPTVLKTF+SLST+NVFACSDRPTVIYSSNHKLVFSN
Sbjct: 625 LFYFLLEATTGALTDRKKVTLGTQPTVLKTFKSLSTSNVFACSDRPTVIYSSNHKLVFSN 684
Query: 487 VNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESS 546
VNL++VNHMC LN+E YPDSLALA D+T GTIDEIQKLHIRTVPLGE PRRIAYQE++
Sbjct: 685 VNLKEVNHMCPLNSEGYPDSLALANDNTLLIGTIDEIQKLHIRTVPLGELPRRIAYQEAT 744
Query: 547 QTFGVITTRIDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFN 606
QTFGVIT R DI + G TPVRPSASTQAQN T S S S KPGS ST N
Sbjct: 745 QTFGVITIRNDILGSSGLTPVRPSASTQAQNVTHSAQMS-SIFKPGSV--STGND--QLG 799
Query: 607 MEVEVHNLLIIDQNTFE 623
EVE+HNLLIIDQ+TFE
Sbjct: 800 QEVEIHNLLIIDQHTFE 816
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/284 (65%), Positives = 234/284 (82%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T D+NL++AKN R+EI+ V+PEGLRPVKEI +YG+I++MK +R +KKDLLF +T +
Sbjct: 24 TSPDDINLILAKNTRLEIYVVSPEGLRPVKEIGIYGRISIMKLYRPAGEKKDLLFFLTAK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNA ILEC D++EI+TKAHGN++D +PSE G I IIDPE RVIGLRLY+GLFK+I
Sbjct: 84 YNAAILECVQYGDSIEIITKAHGNIADTFSRPSETGNIGIIDPECRVIGLRLYDGLFKVI 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KDN ELKA +IRMEEL +QD++FLHGC+ PTI+ +HQD RH+KT+E+SLK+KEF
Sbjct: 144 PLDKDNRELKAFNIRMEELTVQDMEFLHGCKTPTIVLLHQDSQARHMKTYEVSLKDKEFV 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PWKQD++E EA+LVI VPEP GA+IIGQESI YH+G YV + P +I+ STIVCY K
Sbjct: 204 KGPWKQDHVESEANLVIAVPEPFCGALIIGQESITYHNGDQYVVITPHLIRQSTIVCYGK 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VDANG RYLLGD+AGRLFMLLLE+E+KMDGT +VK+ K+E LGE
Sbjct: 264 VDANGSRYLLGDMAGRLFMLLLEREDKMDGTTTVKDLKLEFLGE 307
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 162/242 (66%), Positives = 203/242 (83%), Gaps = 6/242 (2%)
Query: 975 EMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLIS 1034
+MSS+ KPGS ST N EVE+HNLLIIDQ+TFE+LHAHQ EYA+S++S
Sbjct: 781 QMSSI--FKPGSV--STGND--QLGQEVEIHNLLIIDQHTFEVLHAHQFMQTEYAMSIVS 834
Query: 1035 SKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNG 1094
++ G DPNTY+++GTA V P+E++PKQGRI++FH+ DGKL+ +AE+EIKGA YSM EFNG
Sbjct: 835 TRLGNDPNTYYIVGTANVLPDESDPKQGRIVVFHWVDGKLEHVAEQEIKGAPYSMLEFNG 894
Query: 1095 KLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTM 1154
KLLA+INSTVRLFEW E+ELR ECSHFNNI+AL+L+ KGDF+LVGDLMRS++LL YK +
Sbjct: 895 KLLAAINSTVRLFEWNAERELRNECSHFNNILALYLRAKGDFVLVGDLMRSMSLLAYKPL 954
Query: 1155 EGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTV 1214
EG+FEEI+RDY NWM+S+EILDD+ FLGAE++ NLF+CQKDSAAT+DE+R HLQEVG
Sbjct: 955 EGNFEEIARDYQTNWMSSVEILDDDTFLGAESTTNLFVCQKDSAATTDEERQHLQEVGQF 1014
Query: 1215 HL 1216
HL
Sbjct: 1015 HL 1016
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 50/84 (59%), Gaps = 14/84 (16%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSI--------------GSPKNLDNTLVLSF 46
EGSLRIIRNGIGI EHA IDLPGIKG+W L + G DNTLVLSF
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGMWPLRVGPGVAPHGGDGRDPGDSAERDNTLVLSF 443
Query: 47 VGHTRVLTLSGAEWGFHLLRGFSS 70
V TRVL LSG E L GF +
Sbjct: 444 VRQTRVLMLSGEEVEETELAGFDT 467
>gi|326919947|ref|XP_003206238.1| PREDICTED: DNA damage-binding protein 1-like [Meleagris gallopavo]
Length = 1079
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/544 (67%), Positives = 429/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 209 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 268
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 269 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 328
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L S +DN LVLSFVG TRVL L+G EVEETE+
Sbjct: 329 IRNGIGIHEHASIDLPGIKGLWPLRSDSHHEMDNMLVLSFVGQTRVLMLNGEEVEETELT 388
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ PNGK+ISV SCN NQV+
Sbjct: 389 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPNGKNISVASCNSNQVV 448
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYLE+ E++Q+ +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 449 VAVGRALYYLEIRPQELRQINCTEMEHEVACLDITPLGDTNGMSP-----LCAIGLWTDI 503
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L +G L+
Sbjct: 504 SARILKLPSFEMLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLSLETGLLS 563
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 564 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 623
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 624 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 683
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
A G+T +RPSASTQA +++ ST S STA F EVEVHNLLIIDQ
Sbjct: 684 ASGGTTALRPSASTQALSSSVSTSKLFS--------SSTAPHETSFGEEVEVHNLLIIDQ 735
Query: 620 NTFE 623
+TFE
Sbjct: 736 HTFE 739
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 169/227 (74%), Positives = 199/227 (87%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
STA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GT
Sbjct: 713 STAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGT 772
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
A+V+PEE EPKQGRI++FHY DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EW
Sbjct: 773 AMVYPEEAEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEW 832
Query: 1110 TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
T EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNW
Sbjct: 833 TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 892
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
M+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 893 MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHL 939
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 161/236 (68%), Positives = 202/236 (85%)
Query: 732 DKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVI 791
+ KDLLFI+T +YNA ILE + + DN++I+T+AHGNV DRIG+PSE GII IIDPE R+I
Sbjct: 11 ESKDLLFILTAKYNACILEYKQNGDNIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMI 70
Query: 792 GLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVK 851
GLRLY+GLFK+IPL+++N ELKA +IR+EEL++ DV+FL+GCQ PTI ++QD GRHVK
Sbjct: 71 GLRLYDGLFKVIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICFVYQDPQGRHVK 130
Query: 852 THEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQ 911
T+E+SL+EKEF K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP
Sbjct: 131 TYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPP 190
Query: 912 IIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
IIK STIVC+ +VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 191 IIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 246
Score = 89.7 bits (221), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L S +DN LVLSFVG TRVL L+G E
Sbjct: 323 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHHEMDNMLVLSFVGQTRVLMLNGEEV 382
Query: 61 GFHLLRGF 68
L GF
Sbjct: 383 EETELTGF 390
>gi|224050582|ref|XP_002191856.1| PREDICTED: DNA damage-binding protein 1 [Taeniopygia guttata]
Length = 1140
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/544 (67%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + DNTLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPHRETDNTLVLSFVGQTRVLMLNGEEVEETELT 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E K+ VS W+ PNGK+ISV SCN NQV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKSLVSEWKEPNGKNISVASCNSNQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYLE+ E++Q++ +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLEIRPQELRQISCTEMEHEVACLDITPLGDSNGMSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLSLETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
A G+T +RPSASTQA +++ ST S STA F EVEVHNLLIIDQ
Sbjct: 745 ASGGTTALRPSASTQALSSSVSTSKLFS--------SSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 238/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGK AVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKTAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + + D+++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL++ DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELQVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 169/227 (74%), Positives = 199/227 (87%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
STA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GT
Sbjct: 774 STAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGT 833
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
A+V+PEE EPKQGRI++FHY DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EW
Sbjct: 834 AMVYPEEAEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEW 893
Query: 1110 TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
T EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNW
Sbjct: 894 TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 953
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
M+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 954 MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHL 1000
Score = 89.7 bits (221), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + DNTLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPHRETDNTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELTGF 451
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 58/81 (71%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGK AVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKTAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K N I +T
Sbjct: 82 AKYNACILEYKQNGDSIDIIT 102
>gi|427780151|gb|JAA55527.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
Length = 1181
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/556 (66%), Positives = 436/556 (78%), Gaps = 24/556 (4%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
YLLGD+AGRLFMLLLE+E+KMDGT +VK+ K+E LGEI+I EC+TYLDNGVV+VGSRLGD
Sbjct: 296 YLLGDMAGRLFMLLLEREDKMDGTTTVKDLKLEFLGEITIAECITYLDNGVVYVGSRLGD 355
Query: 142 SQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRII 201
SQL+KL+ ++ G++V +ME FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRII
Sbjct: 356 SQLIKLHAERNDQGSFVEIMEVFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII 415
Query: 202 RNGIGIEEHACIDLPGIKGIWALSIG--------------SPKNLDNTLVLSFVGHTRVL 247
RNGIGI EHA IDLPGIKG+W L +G DNTLVLSFV TRVL
Sbjct: 416 RNGIGIHEHASIDLPGIKGMWPLRVGPGVAPHGGDGRDPGDSAERDNTLVLSFVRQTRVL 475
Query: 248 TLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGK 307
LSG EVEETE+ GF + QQTF+CGNV + ++QVT +A L+ +++K ++ W+PP +
Sbjct: 476 MLSGEEVEETELAGFDTSQQTFFCGNVRNKQLIQVTAAAVRLVDSQTKQLLNEWKPPGAR 535
Query: 308 SISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPA 367
+ISVV+CN++QV+CA +V+ LE+ + Q+++ LE EVACLDI+PLS +
Sbjct: 536 NISVVTCNQSQVVCAVRKEVFCLEIGDGVLNQISNAELENEVACLDITPLS-----EKAE 590
Query: 368 KAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSM 427
KA L AVGLWTDIS R+LSLPSL+++ KE +GGEIIPRSIL+T FEG YLL ALGDGS+
Sbjct: 591 KATLCAVGLWTDISIRILSLPSLQQLQKENIGGEIIPRSILITTFEGIHYLLCALGDGSL 650
Query: 428 FYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNV 487
FYF L+ +G LTD+KKVTLGTQPTVLKTF+SLST+NVFACSDRPTVIYSSNHKLVFSNV
Sbjct: 651 FYFLLEATTGALTDRKKVTLGTQPTVLKTFKSLSTSNVFACSDRPTVIYSSNHKLVFSNV 710
Query: 488 NLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQ 547
NL++VNHMC LN+E YPDSLALA D+T GTIDEIQKLHIRTVPLGE PRRIAYQE++Q
Sbjct: 711 NLKEVNHMCPLNSEGYPDSLALANDNTLLIGTIDEIQKLHIRTVPLGELPRRIAYQEATQ 770
Query: 548 TFGVITTRIDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNM 607
TFGVIT R DI + G TPVRPSASTQAQN T S S S KPGS ST N
Sbjct: 771 TFGVITIRNDILGSSGLTPVRPSASTQAQNVTHSAQMS-SIFKPGSV--STGND--QLGQ 825
Query: 608 EVEVHNLLIIDQNTFE 623
EVE+HNLLIIDQ+TFE
Sbjct: 826 EVEIHNLLIIDQHTFE 841
Score = 394 bits (1013), Expect = e-106, Method: Compositional matrix adjust.
Identities = 179/271 (66%), Positives = 224/271 (82%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T D+NL++AKN R+EI+ V+PEGLRPVKEI +YG+I++MK +R +KKDLLF +T +
Sbjct: 24 TSPDDINLILAKNTRLEIYVVSPEGLRPVKEIGIYGRISIMKLYRPAGEKKDLLFFLTAK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNA ILEC D++EI+TKAHGN++D +PSE G I IIDPE RVIGLRLY+GLFK+I
Sbjct: 84 YNAAILECVQYGDSIEIITKAHGNIADTFSRPSETGNIGIIDPECRVIGLRLYDGLFKVI 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KDN ELKA +IRMEEL +QD++FLHGC+ PTI+ +HQD RH+KT+E+SLK+KEF
Sbjct: 144 PLDKDNRELKAFNIRMEELTVQDMEFLHGCKTPTIVLLHQDSQARHMKTYEVSLKDKEFV 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PWKQD++E EA+LVI VPEP GA+IIGQESI YH+G YV + P +I+ STIVCY K
Sbjct: 204 KGPWKQDHVESEANLVIAVPEPFCGALIIGQESITYHNGDQYVVITPHLIRQSTIVCYGK 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGT 954
VDANG RYLLGD+AGRLFMLLLE+E+KMDGT
Sbjct: 264 VDANGSRYLLGDMAGRLFMLLLEREDKMDGT 294
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 162/242 (66%), Positives = 203/242 (83%), Gaps = 6/242 (2%)
Query: 975 EMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLIS 1034
+MSS+ KPGS ST N EVE+HNLLIIDQ+TFE+LHAHQ EYA+S++S
Sbjct: 806 QMSSI--FKPGSV--STGND--QLGQEVEIHNLLIIDQHTFEVLHAHQFMQTEYAMSIVS 859
Query: 1035 SKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNG 1094
++ G DPNTY+++GTA V P+E++PKQGRI++FH+ DGKL+ +AE+EIKGA YSM EFNG
Sbjct: 860 TRLGNDPNTYYIVGTANVLPDESDPKQGRIVVFHWVDGKLEHVAEQEIKGAPYSMLEFNG 919
Query: 1095 KLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTM 1154
KLLA+INSTVRLFEW E+ELR ECSHFNNI+AL+L+ KGDF+LVGDLMRS++LL YK +
Sbjct: 920 KLLAAINSTVRLFEWNAERELRNECSHFNNILALYLRAKGDFVLVGDLMRSMSLLAYKPL 979
Query: 1155 EGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTV 1214
EG+FEEI+RDY NWM+S+EILDD+ FLGAE++ NLF+CQKDSAAT+DE+R HLQEVG
Sbjct: 980 EGNFEEIARDYQTNWMSSVEILDDDTFLGAESTTNLFVCQKDSAATTDEERQHLQEVGQF 1039
Query: 1215 HL 1216
HL
Sbjct: 1040 HL 1041
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 50/84 (59%), Gaps = 14/84 (16%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSI--------------GSPKNLDNTLVLSF 46
EGSLRIIRNGIGI EHA IDLPGIKG+W L + G DNTLVLSF
Sbjct: 409 EGSLRIIRNGIGIHEHASIDLPGIKGMWPLRVGPGVAPHGGDGRDPGDSAERDNTLVLSF 468
Query: 47 VGHTRVLTLSGAEWGFHLLRGFSS 70
V TRVL LSG E L GF +
Sbjct: 469 VRQTRVLMLSGEEVEETELAGFDT 492
>gi|301616502|ref|XP_002937687.1| PREDICTED: DNA damage-binding protein 1-like [Xenopus (Silurana)
tropicalis]
Length = 1140
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/544 (65%), Positives = 434/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDG+ ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGSVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKL +E G+YV VME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLTAESNEQGSYVVVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + + ++ D+TLVLSFVG TRVLTL+G EVEET++
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRVAADRDTDDTLVLSFVGQTRVLTLTGEEVEETDLA 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L++ ++ VS W+ P G+ +SV SCN QVL
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVAQNPQSLVSEWKEPQGRKVSVCSCNSRQVL 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYLE+H E++Q++ +E+EVACLD++PL +T S L A+GLWTDI
Sbjct: 510 LAVGRVLYYLEIHPGELRQISCTEMEHEVACLDVTPLGGSDTLS-----SLCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+LSLP + + KE LGGEIIPRSILMT FE YLL ALGDG++FYFSL+ +G L+
Sbjct: 565 SARILSLPGFQLLHKEMLGGEIIPRSILMTSFESSHYLLCALGDGALFYFSLNTDTGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
E YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 EGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
A GS+P+RPSASTQA +++ S S ST+ F EVEVHNLLIIDQ
Sbjct: 745 ASGGSSPLRPSASTQALSSSVSCSKLFS--------GSTSPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 411 bits (1057), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 239/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VTPEGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSEDDLNLLIAKNTRLEIYVVTPEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + + D+++I+T+AHGNV DRIG+PSE GII IIDP+ R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGIIGIIDPDCRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPLE+DN ELKA +IR+EEL + DV+FL+ CQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLERDNKELKAFNIRLEELHVIDVKFLYSCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
+K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 SKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDG+ ++K+ +VELLGE
Sbjct: 263 RVDVNGSRYLLGDMEGRLFMLLLEKEEQMDGSVTLKDLRVELLGE 307
Score = 363 bits (932), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 164/227 (72%), Positives = 196/227 (86%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
ST+ F EVEVHNLLIIDQ+TFE+LH HQ EY LSL+S K G+DP TYFV+GT
Sbjct: 774 STSPHETSFGEEVEVHNLLIIDQHTFEVLHTHQFLQNEYTLSLVSCKLGKDPTTYFVVGT 833
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
A+V+P+E EPKQGRI++F Y+DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EW
Sbjct: 834 AMVYPDEAEPKQGRIVVFQYNDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEW 893
Query: 1110 TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
T EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNW
Sbjct: 894 TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 953
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
M+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 954 MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 53/68 (77%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + + ++ D+TLVLSFVG TRVLTL+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRVAADRDTDDTLVLSFVGQTRVLTLTGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETDLAGF 451
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 13/108 (12%)
Query: 598 TANQPADFNMEVEVHNLLIIDQNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKE 657
TA +P N V H FTS DLNL++AKN R+EI+ VTPEGLRPVKE
Sbjct: 8 TAQKPTAVNACVTGH-------------FTSEDDLNLLIAKNTRLEIYVVTPEGLRPVKE 54
Query: 658 IFLYGKIAVMKFFRGPTDKKDLLFIITQRTDLNLVVAKNNRIEIHTVT 705
+ +YGKIAVM+ FR + KDLLFI+T + + ++ K N I +T
Sbjct: 55 VGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIIT 102
>gi|443707495|gb|ELU03057.1| hypothetical protein CAPTEDRAFT_148808 [Capitella teleta]
Length = 1084
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/543 (65%), Positives = 434/543 (79%), Gaps = 13/543 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RY+LGD+AGRLFMLLLEKEE++DG+ +VK+ KVELLGE +I EC+TYLDNGVV+VGSRLG
Sbjct: 215 RYMLGDMAGRLFMLLLEKEERIDGSMAVKDIKVELLGESAIAECITYLDNGVVYVGSRLG 274
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN D++G+YV VME+FTNL P++DM VVDLERQGQGQLVTCSGG+KEGSLRI
Sbjct: 275 DSQLVKLNVEADDSGSYVQVMETFTNLGPVVDMCVVDLERQGQGQLVTCSGGYKEGSLRI 334
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + SP D+ +VLSFVG TRVL LSG EVEETE+G
Sbjct: 335 IRNGIGIHEHATIDLPGIKGMWPLRVDSPTQ-DDMIVLSFVGQTRVLLLSGEEVEETELG 393
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +DQQTF+CGNV +LQ+T ++ L+ +K +S W PP+GK++SV CN QV+
Sbjct: 394 GFEADQQTFFCGNVAHSQLLQITAASVRLVDPRTKKLLSEWRPPSGKNLSVAGCNHCQVV 453
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
CA +V+ L++ + +E+EVAC+DI+PL++E S QL AVGLWTDI
Sbjct: 454 CAVSREVFCLDIQQGALILQGSTTMEHEVACVDITPLNDESGPS-----QLCAVGLWTDI 508
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPSLE++ +E LGGEIIPRSIL+ FEG Y+L ALGDG++FYF L P++G L+
Sbjct: 509 SARILQLPSLEQLHQEMLGGEIIPRSILLATFEGVNYVLCALGDGALFYFHLQPSTGVLS 568
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TF+S TTNVFACSDRPTV+YSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 569 DRKKVTLGTQPTVLRTFKSPGTTNVFACSDRPTVVYSSNHKLVFSNVNLKEVNYMCPLNS 628
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
E YPDSLALA D T T GTIDEIQKLHIR VPLGE PRRIAYQE+SQTFGVIT R D+Q+
Sbjct: 629 EGYPDSLALANDCTLTIGTIDEIQKLHIRNVPLGETPRRIAYQEASQTFGVITLRSDLQD 688
Query: 561 ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQN 620
++GSTP RPSASTQA +T+SS S +K S AN F EVEVH+LL++DQ+
Sbjct: 689 SNGSTPARPSASTQALSTSSS-----SNVK--VMAASNANTEHTFGDEVEVHSLLVLDQH 741
Query: 621 TFE 623
TFE
Sbjct: 742 TFE 744
Score = 365 bits (938), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 167/227 (73%), Positives = 198/227 (87%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
S AN F EVEVH+LL++DQ+TFE+LH+HQL E+A +L+S +FGEDP TY+V+GT
Sbjct: 718 SNANTEHTFGDEVEVHSLLVLDQHTFEVLHSHQLMQYEFATALMSGRFGEDPTTYYVVGT 777
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
A+V+PEE EPKQGRII+F + DGKL Q+AEKEIKGA Y++ EFNGKLLASINSTVRLFEW
Sbjct: 778 AMVYPEEAEPKQGRIIVFRFHDGKLTQVAEKEIKGAAYTLTEFNGKLLASINSTVRLFEW 837
Query: 1110 TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
T EKELR+ECS+FNNIIAL+LK KGDFILVGDLMRS+TLL YK MEG FEEI+RDYNPNW
Sbjct: 838 TAEKELRVECSYFNNIIALYLKTKGDFILVGDLMRSVTLLSYKPMEGCFEEIARDYNPNW 897
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
MTSI++LDD+ FLGAENS+N+F CQKDSAAT+DE+R HLQEVG HL
Sbjct: 898 MTSIDVLDDDTFLGAENSFNIFTCQKDSAATTDEERQHLQEVGLYHL 944
Score = 301 bits (772), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/284 (54%), Positives = 190/284 (66%), Gaps = 55/284 (19%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL++AKN R+E++ VTPEGLRP+KEI +YG+IAV++ FR P + KDLLF++T R
Sbjct: 24 TSTKDLNLIIAKNTRLEVYVVTPEGLRPIKEIGIYGRIAVLELFRPPGESKDLLFLLTAR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC D D++EI+T+AHGNV DRIG+PSE GII I+DP R+IGLRLY+GLFK+I
Sbjct: 84 YNAMILECSQDGDHIEIITRAHGNVQDRIGRPSETGIIGIVDPLCRIIGLRLYDGLFKVI 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL++D ELKA +IR+EEL + DVQFLHGC PTII +
Sbjct: 144 PLDRDMRELKAFNIRLEELNVIDVQFLHGCSTPTII----------------------LS 181
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
T K DN Y+AVAP IIK STI C K
Sbjct: 182 ITYHKGDN---------------------------------YLAVAPPIIKQSTITCCGK 208
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VDANG RY+LGD+AGRLFMLLLEKEE++DG+ +VK+ KVELLGE
Sbjct: 209 VDANGCRYMLGDMAGRLFMLLLEKEERIDGSMAVKDIKVELLGE 252
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 60/81 (74%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS+ DLNL++AKN R+E++ VTPEGLRP+KEI +YG+IAV++ FR P + KDLLF++T
Sbjct: 22 NFTSTKDLNLIIAKNTRLEVYVVTPEGLRPIKEIGIYGRIAVLELFRPPGESKDLLFLLT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
R + ++ + I +T
Sbjct: 82 ARYNAMILECSQDGDHIEIIT 102
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + SP D+ +VLSFVG TRVL LSG E
Sbjct: 329 EGSLRIIRNGIGIHEHATIDLPGIKGMWPLRVDSPTQ-DDMIVLSFVGQTRVLLLSGEEV 387
Query: 61 GFHLLRGFSS 70
L GF +
Sbjct: 388 EETELGGFEA 397
>gi|147906138|ref|NP_001083624.1| DNA damage-binding protein 1 [Xenopus laevis]
gi|82186503|sp|Q6P6Z0.1|DDB1_XENLA RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|38303806|gb|AAH61946.1| Ddb1 protein [Xenopus laevis]
Length = 1140
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/544 (65%), Positives = 432/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDG+ ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGSVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKL +E G+YV VME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLTTESNEQGSYVVVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + + ++ D+TLVLSFVG TRVLTL+G EVEET++
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRVAADRDTDDTLVLSFVGQTRVLTLTGEEVEETDLA 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S + VS W+ P G+ +SV SCN QVL
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQNPQNLVSEWKEPQGRKVSVCSCNSRQVL 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYLE+H E++Q + +E+EVACLD++PL +T S L A+GLWTDI
Sbjct: 510 LAVGRVLYYLEIHPGELRQTSCTEMEHEVACLDVTPLGGNDTLS-----SLCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+LSLP + + KE LGGEIIPRSILMT FE YLL ALGDG++FYFSL+ +G L+
Sbjct: 565 SARILSLPGFQLLHKEMLGGEIIPRSILMTSFESSHYLLCALGDGALFYFSLNTDTGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
E YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 EGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLFESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
A GS+P+RPSASTQA +++ S S ST+ F EVEVHNLLIIDQ
Sbjct: 745 ASGGSSPLRPSASTQALSSSVSCSKLFS--------GSTSPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 411 bits (1056), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 238/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VTPEGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSEDDLNLLIAKNTRLEIYVVTPEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + D+++I+T+AHGNV DRIG+PSE GII IIDP+ R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGDSIDIITRAHGNVQDRIGRPSETGIIGIIDPDCRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPLE+DN ELKA +IR+EEL + DV+FL+ CQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLERDNKELKAFNIRLEELHVIDVKFLYSCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
+K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 SKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDG+ ++K+ +VELLGE
Sbjct: 263 RVDVNGSRYLLGDMEGRLFMLLLEKEEQMDGSVTLKDLRVELLGE 307
Score = 363 bits (932), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 164/227 (72%), Positives = 196/227 (86%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
ST+ F EVEVHNLLIIDQ+TFE+LH HQ EY LSL+S K G+DP TYFV+GT
Sbjct: 774 STSPHETSFGEEVEVHNLLIIDQHTFEVLHTHQFLQNEYTLSLVSCKLGKDPTTYFVVGT 833
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
A+V+P+E EPKQGRI++F Y+DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EW
Sbjct: 834 AMVYPDEAEPKQGRIVVFQYNDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEW 893
Query: 1110 TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
T EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNW
Sbjct: 894 TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 953
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
M+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 954 MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 53/68 (77%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + + ++ D+TLVLSFVG TRVLTL+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRVAADRDTDDTLVLSFVGQTRVLTLTGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETDLAGF 451
Score = 89.7 bits (221), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 65/108 (60%), Gaps = 13/108 (12%)
Query: 598 TANQPADFNMEVEVHNLLIIDQNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKE 657
TA +P N V H FTS DLNL++AKN R+EI+ VTPEGLRPVKE
Sbjct: 8 TAQKPTAVNACVTGH-------------FTSEDDLNLLIAKNTRLEIYVVTPEGLRPVKE 54
Query: 658 IFLYGKIAVMKFFRGPTDKKDLLFIITQRTDLNLVVAKNNRIEIHTVT 705
+ +YGKIAVM+ FR + KDLLFI+T + + ++ K + I +T
Sbjct: 55 VGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGDSIDIIT 102
>gi|449283451|gb|EMC90093.1| DNA damage-binding protein 1 [Columba livia]
Length = 1140
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 259 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 318
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 319 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 378
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + + DN LVLSFVG TRVL L+G EVEETE+
Sbjct: 379 IRNGIGIHEHASIDLPGIKGLWPLRSDAHRETDNMLVLSFVGQTRVLMLNGEEVEETELT 438
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ PNGK+ISV SCN +QV+
Sbjct: 439 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPNGKNISVASCNSSQVV 498
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYLE+ E++Q++ +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 499 VAVGRALYYLEIRPQELRQISCTEMEHEVACLDITPLGDTNGMSP-----LCAIGLWTDI 553
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L +G L+
Sbjct: 554 SARILRLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLSLETGLLS 613
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 614 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 673
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 674 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 733
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
A G+T +RPSASTQA +++ ST S STA F EVEVHNLLIIDQ
Sbjct: 734 ASGGTTALRPSASTQALSSSVSTSKLFS--------SSTAPHETSFGEEVEVHNLLIIDQ 785
Query: 620 NTFE 623
+TFE
Sbjct: 786 HTFE 789
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 239/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 12 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 71
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + + D+++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 72 KYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 131
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL+++N ELKA +IR+EEL++ DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 132 IPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 191
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 192 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 251
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 252 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 296
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 169/227 (74%), Positives = 199/227 (87%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
STA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GT
Sbjct: 763 STAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGT 822
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
A+V+PEE EPKQGRI++FHY DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EW
Sbjct: 823 AMVYPEEAEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEW 882
Query: 1110 TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
T EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNW
Sbjct: 883 TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 942
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
M+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 943 MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHL 989
Score = 90.5 bits (223), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%)
Query: 622 FERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLF 681
F +FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLF
Sbjct: 8 FPGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLF 67
Query: 682 IITQRTDLNLVVAKNNRIEIHTVT 705
I+T + + ++ K N I +T
Sbjct: 68 ILTAKYNACILEYKQNGDSIDIIT 91
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + + DN LVLSFVG TRVL L+G E
Sbjct: 373 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDAHRETDNMLVLSFVGQTRVLMLNGEEV 432
Query: 61 GFHLLRGF 68
L GF
Sbjct: 433 EETELTGF 440
>gi|149725200|ref|XP_001502072.1| PREDICTED: DNA damage-binding protein 1 [Equus caballus]
Length = 1140
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/544 (66%), Positives = 431/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHAQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
A G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 ASGGTTALRPSASTQALSSSVSSSK--------LFSSSTATHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TATHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|344295432|ref|XP_003419416.1| PREDICTED: DNA damage-binding protein 1 [Loxodonta africana]
Length = 1140
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/544 (66%), Positives = 431/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT S+K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVSLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK++SV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAQQQLIQITSASVRLVSQEPKALVSEWKEPQGKNVSVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/285 (67%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT S+K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVSLKDLRVELLGE 307
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|74215029|dbj|BAE33503.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/544 (66%), Positives = 431/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 SSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 166/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQ+DSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQRDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|7657011|ref|NP_056550.1| DNA damage-binding protein 1 [Mus musculus]
gi|134034087|sp|Q3U1J4.2|DDB1_MOUSE RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=Damage-specific DNA-binding
protein 1; AltName: Full=UV-damaged DNA-binding factor
gi|5931596|dbj|BAA84699.1| XPE UV-damaged DNA binding factor [Mus musculus]
gi|16307148|gb|AAH09661.1| Damage specific DNA binding protein 1 [Mus musculus]
gi|74182145|dbj|BAE34102.1| unnamed protein product [Mus musculus]
gi|74196166|dbj|BAE32993.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/544 (66%), Positives = 431/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 SSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|354504619|ref|XP_003514371.1| PREDICTED: DNA damage-binding protein 1-like [Cricetulus griseus]
gi|344258340|gb|EGW14444.1| DNA damage-binding protein 1 [Cricetulus griseus]
Length = 1140
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/544 (66%), Positives = 431/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPSRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPSRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|413081953|ref|NP_741992.2| DNA damage-binding protein 1 [Rattus norvegicus]
gi|293344614|ref|XP_002725831.1| PREDICTED: DNA damage-binding protein 1 [Rattus norvegicus]
gi|293356422|ref|XP_002728912.1| PREDICTED: DNA damage-binding protein 1 [Rattus norvegicus]
gi|149062405|gb|EDM12828.1| damage-specific DNA binding protein 1 [Rattus norvegicus]
Length = 1140
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/544 (66%), Positives = 431/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPSRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL E P L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLG-ESNGLSP----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPSRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|281345356|gb|EFB20940.1| hypothetical protein PANDA_015888 [Ailuropoda melanoleuca]
Length = 1124
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/544 (66%), Positives = 431/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 252 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 311
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 312 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 371
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 372 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 431
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 432 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 491
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 492 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 546
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 547 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 606
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 607 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 666
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 667 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 726
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 727 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 778
Query: 620 NTFE 623
+TFE
Sbjct: 779 HTFE 782
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 5 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 64
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 65 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 124
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 125 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 184
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 185 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 244
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 245 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 289
Score = 369 bits (947), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 757 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 816
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 817 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 876
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 877 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 936
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 937 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 982
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 366 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 425
Query: 61 GFHLLRGF 68
L GF
Sbjct: 426 EETELMGF 433
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 4 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 63
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 64 AKYNACILEYKQSGESIDIIT 84
>gi|73983859|ref|XP_533275.2| PREDICTED: DNA damage-binding protein 1 [Canis lupus familiaris]
gi|291409601|ref|XP_002721069.1| PREDICTED: damage-specific DNA binding protein 1 [Oryctolagus
cuniculus]
gi|301781686|ref|XP_002926259.1| PREDICTED: DNA damage-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 1140
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/544 (66%), Positives = 431/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|431910407|gb|ELK13480.1| DNA damage-binding protein 1 [Pteropus alecto]
Length = 1143
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/544 (66%), Positives = 431/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|327278830|ref|XP_003224163.1| PREDICTED: DNA damage-binding protein 1-like [Anolis carolinensis]
Length = 1140
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/544 (66%), Positives = 429/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDG S+K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGGVSLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L DNTLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPHHETDNTLVLSFVGQTRVLMLNGEEVEETELT 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L++ E KA VS W+ PNGK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVTQEPKALVSEWKEPNGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYLE+H E+KQ++ +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRVLYYLEIHPQELKQISCTEMEHEVACLDITPLGDASGMSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS + + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFDLLHKEMLGGEIIPRSILMTTFENSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLSESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
A G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 ASGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/284 (66%), Positives = 237/284 (83%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T +
Sbjct: 24 TSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGENKDLLFILTAK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+I
Sbjct: 84 YNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVI 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PLE++N ELKA +IR+EEL++ DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 144 PLERENKELKAFNIRLEELQVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFN 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+ +
Sbjct: 204 KGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD NG RYLLGD+ GRLFMLLLEKEE+MDG S+K+ +VELLGE
Sbjct: 264 VDPNGSRYLLGDMEGRLFMLLLEKEEQMDGGVSLKDLRVELLGE 307
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 165/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+P+E EPKQGRI++FHY DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPDEAEPKQGRIVVFHYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL++K KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 AEKELRTECNHYNNIMALYVKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQE G HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEFGLFHL 1000
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 48/68 (70%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L DNTLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPHHETDNTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELTGF 451
>gi|444513057|gb|ELV10249.1| DNA damage-binding protein 1 [Tupaia chinensis]
Length = 1146
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/544 (66%), Positives = 431/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSSGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|148709424|gb|EDL41370.1| damage specific DNA binding protein 1 [Mus musculus]
Length = 968
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/544 (66%), Positives = 431/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 SSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/284 (66%), Positives = 237/284 (83%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T +
Sbjct: 24 TSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+I
Sbjct: 84 YNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVI 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 144 PLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFN 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+ +
Sbjct: 204 KGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 264 VDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 312 bits (799), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 141/194 (72%), Positives = 167/194 (86%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGA 1184
+++EILDD+ F G+
Sbjct: 955 SAVEILDDDNFTGS 968
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|355683071|gb|AER97036.1| damage-specific DNA binding protein 1, 127kDa [Mustela putorius
furo]
Length = 1122
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/544 (66%), Positives = 431/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (947), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|348560393|ref|XP_003465998.1| PREDICTED: DNA damage-binding protein 1-like [Cavia porcellus]
Length = 1140
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/544 (66%), Positives = 429/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPSRETDDTLVLSFVGQTRVLMLNGEEVEETELV 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + + L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGD-----SCGLSPLCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILQLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 ADGSTPV-RPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
G T V RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTVLRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 238/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGENKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
+K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 SKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 166/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S + G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCRLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPSRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELVGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGENKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|311247551|ref|XP_003122699.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Sus scrofa]
Length = 1140
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN NQV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSNQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+ LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARISKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (947), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|74138855|dbj|BAE27231.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 431/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YP+SLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPNSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 SSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|410974071|ref|XP_003993471.1| PREDICTED: DNA damage-binding protein 1 [Felis catus]
Length = 1193
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/544 (66%), Positives = 431/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 323 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 382
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 383 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 442
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 443 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 502
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 503 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 562
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 563 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 617
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 618 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 677
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 678 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 737
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 738 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 797
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 798 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 849
Query: 620 NTFE 623
+TFE
Sbjct: 850 HTFE 853
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 76 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 135
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 136 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 195
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 196 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 255
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 256 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 315
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 316 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 360
Score = 369 bits (947), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 828 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 887
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 888 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 947
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 948 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 1007
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 1008 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1053
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 437 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 496
Query: 61 GFHLLRGF 68
L GF
Sbjct: 497 EETELMGF 504
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 75 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 134
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 135 AKYNACILEYKQSGESIDIIT 155
>gi|2632123|emb|CAA05770.1| Xeroderma Pigmentosum Group E Complementing protein [Homo sapiens]
Length = 1140
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTGMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 164/226 (72%), Positives = 196/226 (86%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KG YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGDVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EK++R EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKDVRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|440893607|gb|ELR46310.1| DNA damage-binding protein 1 [Bos grunniens mutus]
Length = 1143
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGMSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+ LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARIAKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|122692537|ref|NP_001073731.1| DNA damage-binding protein 1 [Bos taurus]
gi|426251842|ref|XP_004019630.1| PREDICTED: DNA damage-binding protein 1 [Ovis aries]
gi|134034086|sp|A1A4K3.1|DDB1_BOVIN RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|119223918|gb|AAI26630.1| Damage-specific DNA binding protein 1, 127kDa [Bos taurus]
gi|296471644|tpg|DAA13759.1| TPA: DNA damage-binding protein 1 [Bos taurus]
Length = 1140
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGMSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+ LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARIAKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|119594340|gb|EAW73934.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_b [Homo
sapiens]
Length = 923
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 53 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 112
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 113 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 172
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 173 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 232
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 233 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 292
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 293 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 347
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 348 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 407
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 408 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 467
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 468 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 527
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 528 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 579
Query: 620 NTFE 623
+TFE
Sbjct: 580 HTFE 583
Score = 369 bits (948), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 558 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 617
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 618 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 677
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 678 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 737
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 738 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 783
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 77/90 (85%)
Query: 878 LVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLA 937
+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+ +VD NG RYLLGD+
Sbjct: 1 MVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDME 60
Query: 938 GRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 61 GRLFMLLLEKEEQMDGTVTLKDLRVELLGE 90
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 167 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 226
Query: 61 GFHLLRGF 68
L GF
Sbjct: 227 EETELMGF 234
>gi|359546285|pdb|4A11|A Chain A, Structure Of The Hsddb1-Hscsa Complex
gi|361132519|pdb|4A0K|C Chain C, Structure Of Ddb1-Ddb2-Cul4a-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
Length = 1159
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 289 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 348
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 349 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 408
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 409 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 468
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 469 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 528
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 529 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 583
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 584 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 643
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 644 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 703
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 704 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 763
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 764 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 815
Query: 620 NTFE 623
+TFE
Sbjct: 816 HTFE 819
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 42 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 101
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 102 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 161
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 162 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 221
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 222 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 281
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 282 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 326
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 794 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 853
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 854 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 913
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 914 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 973
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 974 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1019
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 403 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 462
Query: 61 GFHLLRGF 68
L GF
Sbjct: 463 EETELMGF 470
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 41 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 100
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 101 AKYNACILEYKQSGESIDIIT 121
>gi|119594343|gb|EAW73937.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_e [Homo
sapiens]
Length = 896
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 26 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 85
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 86 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 145
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 146 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 205
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 206 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 265
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 266 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 320
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 321 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 380
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 381 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 440
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 441 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 500
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 501 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 552
Query: 620 NTFE 623
+TFE
Sbjct: 553 HTFE 556
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 531 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 590
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 591 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 650
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 651 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 710
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 711 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 756
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 140 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 199
Query: 61 GFHLLRGF 68
L GF
Sbjct: 200 EETELMGF 207
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 46/52 (88%)
Query: 916 STIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
STIVC+ +VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 12 STIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 63
>gi|395852550|ref|XP_003798801.1| PREDICTED: DNA damage-binding protein 1 [Otolemur garnettii]
Length = 1140
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSEPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+ E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVCQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGMSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (947), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|197097564|ref|NP_001126613.1| DNA damage-binding protein 1 [Pongo abelii]
gi|75041202|sp|Q5R649.1|DDB1_PONAB RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|55732122|emb|CAH92767.1| hypothetical protein [Pongo abelii]
Length = 1140
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/285 (66%), Positives = 236/285 (82%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YN ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNVCILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 367 bits (943), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 166/226 (73%), Positives = 196/226 (86%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA Y M EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYPMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 60/81 (74%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ ++ ++ K + I +T
Sbjct: 82 AKYNVCILEYKQSGESIDIIT 102
>gi|358440066|pdb|4A0A|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
Pyrimidine At D-1 Position) At 3.6 A Resolution (Cpd 3)
Length = 1159
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 289 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 348
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 349 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 408
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 409 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 468
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 469 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 528
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 529 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 583
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 584 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 643
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 644 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 703
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 704 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 763
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 764 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 815
Query: 620 NTFE 623
+TFE
Sbjct: 816 HTFE 819
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 42 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 101
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 102 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 161
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 162 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 221
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VP+P GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 222 NKGPWKQENVEAEASMVIAVPKPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 281
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 282 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 326
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 794 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 853
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 854 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 913
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 914 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 973
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 974 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1019
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 403 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 462
Query: 61 GFHLLRGF 68
L GF
Sbjct: 463 EETELMGF 470
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 41 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 100
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 101 AKYNACILEYKQSGESIDIIT 121
>gi|148529014|ref|NP_001914.3| DNA damage-binding protein 1 [Homo sapiens]
gi|296218432|ref|XP_002807395.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1
[Callithrix jacchus]
gi|397516558|ref|XP_003828491.1| PREDICTED: DNA damage-binding protein 1 [Pan paniscus]
gi|402893195|ref|XP_003909786.1| PREDICTED: DNA damage-binding protein 1 [Papio anubis]
gi|426368721|ref|XP_004051351.1| PREDICTED: DNA damage-binding protein 1 [Gorilla gorilla gorilla]
gi|12643730|sp|Q16531.1|DDB1_HUMAN RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=DNA damage-binding protein a;
Short=DDBa; AltName: Full=Damage-specific DNA-binding
protein 1; AltName: Full=HBV X-associated protein 1;
Short=XAP-1; AltName: Full=UV-damaged DNA-binding
factor; AltName: Full=UV-damaged DNA-binding protein 1;
Short=UV-DDB 1; AltName: Full=XPE-binding factor;
Short=XPE-BF; AltName: Full=Xeroderma pigmentosum group
E-complementing protein; Short=XPCe
gi|203282525|pdb|3E0C|A Chain A, Crystal Structure Of Dna Damage-Binding Protein 1(Ddb1)
gi|695362|gb|AAA62838.1| X-associated protein 1, partial [Homo sapiens]
gi|1052865|gb|AAC50349.1| DDBa p127 [Homo sapiens]
gi|15079750|gb|AAH11686.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|29792243|gb|AAH50530.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|30354567|gb|AAH51764.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|61354161|gb|AAX44048.1| damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|119594341|gb|EAW73935.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_c [Homo
sapiens]
gi|168275638|dbj|BAG10539.1| DNA damage-binding protein 1 [synthetic construct]
gi|189065506|dbj|BAG35345.1| unnamed protein product [Homo sapiens]
gi|355566436|gb|EHH22815.1| Damage-specific DNA-binding protein 1 [Macaca mulatta]
gi|380784123|gb|AFE63937.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|380808126|gb|AFE75938.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|380810144|gb|AFE76947.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|383408123|gb|AFH27275.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|410305600|gb|JAA31400.1| damage-specific DNA binding protein 1, 127kDa [Pan troglodytes]
gi|410352015|gb|JAA42611.1| damage-specific DNA binding protein 1, 127kDa [Pan troglodytes]
Length = 1140
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|400260815|pdb|4E54|A Chain A, Damaged Dna Induced Uv-Damaged Dna-Binding Protein
(Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna
Repair
gi|401871507|pdb|4E5Z|A Chain A, Damaged Dna Induced Uv-Damaged Dna-Binding Protein
(Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna
Repair
Length = 1150
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 280 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 339
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 340 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 399
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 400 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 459
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 460 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 519
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 520 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 574
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 575 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 634
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 635 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 694
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 695 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 754
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 755 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 806
Query: 620 NTFE 623
+TFE
Sbjct: 807 HTFE 810
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 33 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 92
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 93 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 152
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 153 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 212
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 213 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 272
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 273 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 317
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 785 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 844
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 845 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 904
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 905 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 964
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 965 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1010
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 394 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 453
Query: 61 GFHLLRGF 68
L GF
Sbjct: 454 EETELMGF 461
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 32 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 91
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 92 AKYNACILEYKQSGESIDIIT 112
>gi|358440058|pdb|4A08|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 13 Bp Cpd-Duplex (
Purine At D-1 Position) At 3.0 A Resolution (Cpd 1)
gi|358440062|pdb|4A09|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 15 Bp Cpd-Duplex
(Purine At D-1 Position) At 3.1 A Resolution (Cpd 2)
Length = 1159
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 289 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 348
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 349 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 408
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 409 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 468
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 469 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 528
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 529 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 583
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 584 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 643
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 644 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 703
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 704 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 763
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 764 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 815
Query: 620 NTFE 623
+TFE
Sbjct: 816 HTFE 819
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/285 (66%), Positives = 236/285 (82%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 42 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 101
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 102 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 161
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+ +SL+EKEF
Sbjct: 162 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYAVSLREKEF 221
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 222 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 281
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 282 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 326
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 794 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 853
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 854 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 913
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 914 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 973
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 974 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1019
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 403 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 462
Query: 61 GFHLLRGF 68
L GF
Sbjct: 463 EETELMGF 470
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 41 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 100
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 101 AKYNACILEYKQSGESIDIIT 121
>gi|358440070|pdb|4A0B|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
gi|358440072|pdb|4A0B|C Chain C, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
Length = 1159
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 289 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 348
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 349 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 408
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 409 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 468
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 469 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 528
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 529 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 583
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 584 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 643
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 644 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 703
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 704 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 763
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 764 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 815
Query: 620 NTFE 623
+TFE
Sbjct: 816 HTFE 819
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/285 (66%), Positives = 236/285 (82%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 42 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 101
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 102 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 161
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 162 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 221
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VP P GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 222 NKGPWKQENVEAEASMVIAVPSPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 281
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 282 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 326
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 794 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 853
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 854 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 913
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 914 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 973
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 974 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1019
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 403 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 462
Query: 61 GFHLLRGF 68
L GF
Sbjct: 463 EETELMGF 470
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 41 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 100
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 101 AKYNACILEYKQSGESIDIIT 121
>gi|403255013|ref|XP_003920244.1| PREDICTED: DNA damage-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 1140
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (946), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 AEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|418316|sp|P33194.1|DDB1_CERAE RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=DDBa; AltName:
Full=Damage-specific DNA-binding protein 1; AltName:
Full=UV-damaged DNA-binding protein 1; Short=UV-DDB 1
gi|304026|gb|AAA03021.1| UV-damaged DNA-binding protein [Chlorocebus aethiops]
Length = 1140
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 65/108 (60%), Gaps = 13/108 (12%)
Query: 598 TANQPADFNMEVEVHNLLIIDQNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKE 657
TA +P N V H FTS+ DLNL++AKN R+EI+ VT EGLRPVKE
Sbjct: 8 TAQKPTAVNGCVTAH-------------FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKE 54
Query: 658 IFLYGKIAVMKFFRGPTDKKDLLFIITQRTDLNLVVAKNNRIEIHTVT 705
+ +YGKIAVM+ FR + KDLLFI+T + + ++ K + I +T
Sbjct: 55 VGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIIT 102
>gi|361132523|pdb|4A0L|A Chain A, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
gi|361132525|pdb|4A0L|C Chain C, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
Length = 1144
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 274 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 333
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 334 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 393
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 394 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 453
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 454 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 513
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 514 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 568
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 569 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 628
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 629 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 688
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 689 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 748
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 749 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 800
Query: 620 NTFE 623
+TFE
Sbjct: 801 HTFE 804
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 27 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 86
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 87 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 146
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 147 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 206
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 207 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 266
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 267 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 311
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 779 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 838
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 839 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 898
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 899 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 958
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 959 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1004
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 388 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 447
Query: 61 GFHLLRGF 68
L GF
Sbjct: 448 EETELMGF 455
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 26 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 85
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 86 AKYNACILEYKQSGESIDIIT 106
>gi|221040048|dbj|BAH11787.1| unnamed protein product [Homo sapiens]
Length = 1092
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD +G RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPHGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|355752055|gb|EHH56175.1| Damage-specific DNA-binding protein 1, partial [Macaca
fascicularis]
Length = 1125
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 255 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 314
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 315 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 374
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 375 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 434
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 435 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 494
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 495 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 549
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 550 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 609
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 610 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 669
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 670 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 729
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 730 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 781
Query: 620 NTFE 623
+TFE
Sbjct: 782 HTFE 785
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 8 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 67
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 68 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 127
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 128 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 187
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 188 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 247
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 248 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 292
Score = 369 bits (947), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 760 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 819
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 820 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 879
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 880 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 939
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 940 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 985
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 369 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 428
Query: 61 GFHLLRGF 68
L GF
Sbjct: 429 EETELMGF 436
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 7 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 66
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 67 AKYNACILEYKQSGESIDIIT 87
>gi|384941436|gb|AFI34323.1| DNA damage-binding protein 1 [Macaca mulatta]
Length = 1140
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|194389106|dbj|BAG61570.1| unnamed protein product [Homo sapiens]
Length = 1009
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 429/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 139 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 198
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 199 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 258
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 259 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 318
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 319 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 378
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 379 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 433
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 434 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 493
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 494 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 553
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQ- 559
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q
Sbjct: 554 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQG 613
Query: 560 EADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 614 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 665
Query: 620 NTFE 623
+TFE
Sbjct: 666 HTFE 669
Score = 367 bits (943), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 166/226 (73%), Positives = 196/226 (86%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 644 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 703
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 704 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 763
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 764 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 823
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++N F+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 824 SAVEILDDDNFLGAENAFNSFVCQKDSAATTDEERQHLQEVGLFHL 869
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 66/77 (85%)
Query: 891 IIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEK 950
IIGQESI YH+G Y+A+AP IIK STIVC+ +VD NG RYLLGD+ GRLFMLLLEKEE+
Sbjct: 100 IIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQ 159
Query: 951 MDGTFSVKEPKVELLGE 967
MDGT ++K+ +VELLGE
Sbjct: 160 MDGTVTLKDLRVELLGE 176
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 59/79 (74%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + K LLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKGLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEIL 761
+YNA ILE + ++++I+
Sbjct: 83 KYNACILEYKQSGESIDII 101
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 253 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 312
Query: 61 GFHLLRGF 68
L GF
Sbjct: 313 EETELMGF 320
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 59/85 (69%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + K LLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKGLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVTPEGL 709
+ + ++ K + I + E +
Sbjct: 82 AKYNACILEYKQSGESIDIIGQESI 106
>gi|410045300|ref|XP_508472.4| PREDICTED: DNA damage-binding protein 1 [Pan troglodytes]
Length = 1107
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 277 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 336
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 337 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 396
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 397 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 456
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 457 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 516
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 517 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 571
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 572 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 631
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 632 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 691
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 692 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 751
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 752 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 803
Query: 620 NTFE 623
+TFE
Sbjct: 804 HTFE 807
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 30 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 89
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 90 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 149
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 150 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 209
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 210 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 269
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 270 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 314
Score = 369 bits (947), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 782 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 841
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 842 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 901
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 902 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 961
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 962 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1007
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 391 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 450
Query: 61 GFHLLRGF 68
L GF
Sbjct: 451 EETELMGF 458
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 29 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 88
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 89 AKYNACILEYKQSGESIDIIT 109
>gi|345328202|ref|XP_003431248.1| PREDICTED: DNA damage-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 1045
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/544 (65%), Positives = 429/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDG ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 175 RYLLGDMEGRLFMLLLEKEEQMDGAVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 234
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 235 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 294
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L S + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 295 IRNGIGIHEHASIDLPGIKGLWPLRSNSNRETDDTLVLSFVGQTRVLMLNGEEVEETELT 354
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +QQTF+CGNV + ++Q+T ++ L++ E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 355 GFVDNQQTFFCGNVAHQQLIQITSASVRLVTQEPKALVSEWKEPQGKNISVASCNSSQVV 414
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 415 VAVGRALYYLQIHPRELRQISHTEMEHEVACLDITPLGDSHGMSP-----LCAIGLWTDI 469
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L +G L+
Sbjct: 470 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLSIETGLLS 529
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 530 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 589
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 590 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEGSQCFGVLSSRIEVQD 649
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
A G+T +RPS STQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 650 ASGGTTALRPSGSTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 701
Query: 620 NTFE 623
+TFE
Sbjct: 702 HTFE 705
Score = 365 bits (937), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 166/226 (73%), Positives = 196/226 (86%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+D NTYF++GTA
Sbjct: 680 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDANTYFIVGTA 739
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 740 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 799
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 800 AEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 859
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 860 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 905
Score = 303 bits (777), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 139/200 (69%), Positives = 171/200 (85%)
Query: 768 VSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQDV 827
+ DRIG+PSE GII IIDPE R+IGLRLY+GLFK+IPL++DN ELKA +IR+EEL++ DV
Sbjct: 13 LKDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELQVIDV 72
Query: 828 QFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLG 887
+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF K PWKQ+N+E EAS+VI VPEP G
Sbjct: 73 KFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFG 132
Query: 888 GAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEK 947
GAIIIGQESI YH+G Y+A+AP IIK STIVC+ +VD NG RYLLGD+ GRLFMLLLEK
Sbjct: 133 GAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEK 192
Query: 948 EEKMDGTFSVKEPKVELLGE 967
EE+MDG ++K+ +VELLGE
Sbjct: 193 EEQMDGAVTLKDLRVELLGE 212
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 50/68 (73%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L S + D+TLVLSFVG TRVL L+G E
Sbjct: 289 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSNSNRETDDTLVLSFVGQTRVLMLNGEEV 348
Query: 61 GFHLLRGF 68
L GF
Sbjct: 349 EETELTGF 356
>gi|221046711|pdb|3EI1|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 14 Bp 6-4
Photoproduct Containing Dna-Duplex
gi|221046715|pdb|3EI2|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Abasic Site
Containing Dna-Duplex
gi|221046719|pdb|3EI3|A Chain A, Structure Of The Hsddb1-Drddb2 Complex
Length = 1158
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 288 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 347
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 348 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 407
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 408 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 467
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 468 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 527
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 528 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 582
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 583 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 642
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 643 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 702
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 703 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 762
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 763 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 814
Query: 620 NTFE 623
+TFE
Sbjct: 815 HTFE 818
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 41 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 100
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 101 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 160
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 161 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 220
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 221 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 280
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 281 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 325
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 793 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 852
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 853 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 912
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 913 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 972
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 973 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1018
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 402 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 461
Query: 61 GFHLLRGF 68
L GF
Sbjct: 462 EETELMGF 469
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 40 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 99
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 100 AKYNACILEYKQSGESIDIIT 120
>gi|119594342|gb|EAW73936.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_d [Homo
sapiens]
Length = 1146
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|297267724|ref|XP_001082958.2| PREDICTED: DNA damage-binding protein 1 [Macaca mulatta]
Length = 1092
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (947), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|441604084|ref|XP_004087862.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1
[Nomascus leucogenys]
Length = 1140
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/544 (65%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV+ ME+FTNL P +DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVAAMETFTNLGPXVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|5353754|gb|AAD42230.1|AF159853_1 damage-specific DNA binding protein 1 [Mus musculus]
Length = 1140
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 429/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT + K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTPKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSRYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYS NHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSXNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 SSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 405 bits (1040), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/285 (66%), Positives = 236/285 (82%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R++I+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLKIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT + K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTPKDLRVELLGE 307
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R++I+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLKIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|119594339|gb|EAW73933.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_a [Homo
sapiens]
Length = 1094
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|16197726|emb|CAC94909.1| damaged-DNA recognition protein 1 [Mus musculus]
Length = 994
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/544 (65%), Positives = 429/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPRAKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KK+TLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVN ++VN+MC LN+
Sbjct: 625 DRKKMTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNFKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/284 (66%), Positives = 237/284 (83%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T D+NL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T +
Sbjct: 24 TSAEDINLLIAKNTRLEIYVVTTEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+I
Sbjct: 84 YNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVI 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 144 PLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFN 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+ +
Sbjct: 204 KGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 264 VDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 153/207 (73%), Positives = 181/207 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDS 1197
+++EILDD+ FLGAEN++NLF+CQKDS
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDS 981
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ D+NL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDINLLIAKNTRLEIYVVTTEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|90108797|pdb|2B5L|A Chain A, Crystal Structure Of Ddb1 In Complex With Simian Virus 5 V
Protein
gi|90108798|pdb|2B5L|B Chain B, Crystal Structure Of Ddb1 In Complex With Simian Virus 5 V
Protein
gi|90108801|pdb|2B5M|A Chain A, Crystal Structure Of Ddb1
gi|116667897|pdb|2HYE|A Chain A, Crystal Structure Of The Ddb1-cul4a-rbx1-sv5v Complex
gi|1136228|gb|AAA88883.1| UV-damaged DNA binding factor [Homo sapiens]
gi|1588524|prf||2208446A xeroderma pigmentosum group E-binding factor
Length = 1140
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/544 (65%), Positives = 429/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + +TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETYDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 367 bits (941), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 165/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EK++R EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKDVRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 48/68 (70%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + +TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETYDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
>gi|221046721|pdb|3EI4|A Chain A, Structure Of The Hsddb1-Hsddb2 Complex
gi|221046723|pdb|3EI4|C Chain C, Structure Of The Hsddb1-Hsddb2 Complex
gi|221046725|pdb|3EI4|E Chain E, Structure Of The Hsddb1-Hsddb2 Complex
Length = 1158
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/544 (65%), Positives = 429/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 288 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 347
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 348 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 407
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + +TLVLSFVG TRVL L+G EVEETE+
Sbjct: 408 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETYDTLVLSFVGQTRVLMLNGEEVEETELM 467
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 468 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 527
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 528 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 582
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 583 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 642
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 643 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 702
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 703 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 762
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 763 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 814
Query: 620 NTFE 623
+TFE
Sbjct: 815 HTFE 818
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 41 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 100
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 101 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 160
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 161 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 220
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 221 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 280
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 281 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 325
Score = 367 bits (941), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 165/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 793 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 852
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 853 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 912
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EK++R EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 913 TEKDVRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 972
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 973 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1018
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 40 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 99
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 100 AKYNACILEYKQSGESIDIIT 120
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 48/68 (70%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + +TLVLSFVG TRVL L+G E
Sbjct: 402 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETYDTLVLSFVGQTRVLMLNGEEV 461
Query: 61 GFHLLRGF 68
L GF
Sbjct: 462 EETELMGF 469
>gi|432089478|gb|ELK23419.1| DNA damage-binding protein 1 [Myotis davidii]
Length = 1047
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/544 (65%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPTRETDDTLVLSFVGQTRVLMLNGEEVEETELT 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +QQTF+CGNV + ++Q+T ++ L+S + KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDEQQTFFCGNVAHQQLIQITSASVRLVSQDPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +Y L++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYCLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 SSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/284 (66%), Positives = 237/284 (83%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T +
Sbjct: 24 TSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+I
Sbjct: 84 YNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVI 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 144 PLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFN 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+ +
Sbjct: 204 KGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 264 VDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 338 bits (868), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 152/208 (73%), Positives = 181/208 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 AEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSA 1198
+++EILDD+ FLGAEN++NLF+CQKD +
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDRS 982
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPTRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELTGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|270346571|pdb|3I7H|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Hbx
gi|270346573|pdb|3I7K|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Whx
gi|270346575|pdb|3I7L|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Ddb2
gi|270346577|pdb|3I7N|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdtc1
gi|270346579|pdb|3I7O|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Iqwd1
gi|270346581|pdb|3I7P|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr40a
gi|270346583|pdb|3I89|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr22
gi|270346585|pdb|3I8C|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr21a
gi|270346587|pdb|3I8E|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr42a
gi|270346588|pdb|3I8E|B Chain B, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr42a
Length = 1143
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/544 (65%), Positives = 429/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 273 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 332
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 333 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 392
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + +TLVLSFVG TRVL L+G EVEETE+
Sbjct: 393 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETYDTLVLSFVGQTRVLMLNGEEVEETELM 452
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 453 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 512
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 513 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 567
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 568 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 627
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 628 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 687
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 688 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 747
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 748 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 799
Query: 620 NTFE 623
+TFE
Sbjct: 800 HTFE 803
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 26 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 85
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 86 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 145
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 146 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 205
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 206 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 265
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 266 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 310
Score = 366 bits (940), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 165/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 778 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 837
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 838 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 897
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EK++R EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 898 TEKDVRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 957
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 958 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1003
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 25 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 84
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 85 AKYNACILEYKQSGESIDIIT 105
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 48/68 (70%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + +TLVLSFVG TRVL L+G E
Sbjct: 387 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETYDTLVLSFVGQTRVLMLNGEEV 446
Query: 61 GFHLLRGF 68
L GF
Sbjct: 447 EETELMGF 454
>gi|432851195|ref|XP_004066902.1| PREDICTED: DNA damage-binding protein 1-like [Oryzias latipes]
Length = 1140
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/544 (65%), Positives = 430/544 (79%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE MDGT ++K+ VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEELMDGTVALKDLHVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV+VME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVTVMETFTNLGPILDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + + D+ LVLSFVG TRVL LSG EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSEAGRESDDMLVLSFVGQTRVLMLSGEEVEETELP 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +QQTFYCGNV + ++Q+T + L+ +SKA VS W+ P G++ISV +CN QV+
Sbjct: 450 GFVDNQQTFYCGNVAHQQLIQITSGSVRLVLQDSKALVSEWKEPQGRNISVAACNHTQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++ E+KQ++ +E+EVACLDI+PL E+SSE + L AVGLWTDI
Sbjct: 510 LAVGRALYYLQILAGELKQISTTEMEHEVACLDITPLG--ESSSE---SPLCAVGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LP + KE LGGEIIPRSILMT FEG YLL ALGDG++FYF LD +G L+
Sbjct: 565 SARMLKLPCFTPLHKEMLGGEIIPRSILMTTFEGSYYLLCALGDGALFYFGLDLQTGALS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
++KKVTLGTQPTVL+TFRSLST+NVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 ERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
E YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PRRI YQE SQ FGV+++R++IQ+
Sbjct: 685 EGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEIQD 744
Query: 561 ADGS-TPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
A G+ + VRPSASTQA +++ S+ ST+ F EVEVH+LL++DQ
Sbjct: 745 ASGAISAVRPSASTQALSSSVSSSKLF--------PSSTSPHETSFGEEVEVHSLLVVDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/285 (65%), Positives = 236/285 (82%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YG+I+VM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGRISVMELFRPKGESKDLLFILTS 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + + D+++I+T+AHGNV DRIG+PSE GII I+DPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGIIGIVDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL+++N ELKA +IR+EEL++ DV FL+GCQ PT+ I+QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRENRELKAFNIRLEELQVIDVHFLYGCQAPTVCFIYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VIPVPEP GGAIIIGQESI YH+G Y+A+AP IK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHNGDKYLAIAPPTIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE MDGT ++K+ VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEELMDGTVALKDLHVELLGE 307
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 163/227 (71%), Positives = 198/227 (87%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
ST+ F EVEVH+LL++DQ+TFE+LHAHQ P EY LSL+S + G+DP+ YF++GT
Sbjct: 774 STSPHETSFGEEVEVHSLLVVDQHTFEVLHAHQFLPSEYGLSLVSCRLGKDPSVYFIVGT 833
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
A+V+PEE EPKQGRII+FHY DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EW
Sbjct: 834 AMVYPEEPEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEW 893
Query: 1110 TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
T EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNW
Sbjct: 894 TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 953
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
M+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 954 MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHL 1000
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YG+I+VM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGRISVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K N I +T
Sbjct: 82 SKYNACILEYKQNGDSIDIIT 102
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + + D+ LVLSFVG TRVL LSG E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRESDDMLVLSFVGQTRVLMLSGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELPGF 451
>gi|74178494|dbj|BAE32502.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/544 (65%), Positives = 428/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE LL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHCLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRT PL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTDPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 AD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLII Q
Sbjct: 745 SSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIGQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 307
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 165/226 (73%), Positives = 195/226 (86%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLII Q+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIGQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPK GRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKLGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|81868411|sp|Q9ESW0.1|DDB1_RAT RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|9843869|emb|CAB89874.2| damage-specific DNA binding protein 1 [Rattus norvegicus]
Length = 1140
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/544 (65%), Positives = 427/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQ VKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQPVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELM 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPRAKNISVASCNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLD++PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDVTPLGDSNGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA ST T GT++EIQKLHIRTVP+ E+PR+I YQE SQ FGV++TRI++Q+
Sbjct: 685 DGYPDSLALANTSTLTIGTMNEIQKLHIRTVPIYESPRKICYQEVSQCFGVLSTRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ S A F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSAAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/335 (58%), Positives = 253/335 (75%), Gaps = 8/335 (2%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T D+NL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T +
Sbjct: 24 TSAEDINLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+I
Sbjct: 84 YNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVI 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 144 PLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFN 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+ +
Sbjct: 204 KGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIK 983
VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE L+Y+
Sbjct: 264 VDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIA-----ECLTYLD 318
Query: 984 PGST---KQSTANQPADFNMEVEVHNLLIIDQNTF 1015
G + +QP N++ ++ TF
Sbjct: 319 NGVVFVGSRLGDSQPVKLNVDSNEQGSYVVAMETF 353
Score = 365 bits (936), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 165/225 (73%), Positives = 195/225 (86%)
Query: 992 ANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAV 1051
A F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA+
Sbjct: 776 APHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAM 835
Query: 1052 VHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTN 1111
V+PEE EPKQGRI++F Y GKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 836 VYPEEAEPKQGRIVVFQYSGGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTT 895
Query: 1112 EKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMT 1171
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM+
Sbjct: 896 EKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955
Query: 1172 SIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 956 AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELMGF 451
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ D+NL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDINLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|351699158|gb|EHB02077.1| DNA damage-binding protein 1 [Heterocephalus glaber]
Length = 1144
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/544 (65%), Positives = 428/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEEQMDGTVALKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSAPSRETDDTLVLSFVGQTRVLMLNGEEVEETELV 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P GK+ SV S + +QV+
Sbjct: 450 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNNSVASGSSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++ +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 510 VAVGRALYYLQIHPRELRQISQTEMEHEVACLDITPLGDSSGLSP-----LCAIGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 565 SARILQLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+
Sbjct: 685 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQD 744
Query: 561 -ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
+ G+T +RPSASTQA +++ S+ STA F EVEVHNLLIIDQ
Sbjct: 745 TSGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 237/285 (83%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVALKDLRVELLGE 307
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 159/226 (70%), Positives = 191/226 (84%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 775 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 834
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y D + + + +KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 835 MVYPEEAEPKQGRIVVFQYSDEEREVSSRGLVKGAVYSMVEFNGKLLASINSTVRLYEWT 894
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 895 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 955 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSAPSRETDDTLVLSFVGQTRVLMLNGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELVGF 451
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|348526664|ref|XP_003450839.1| PREDICTED: DNA damage-binding protein 1-like [Oreochromis
niloticus]
Length = 1140
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/544 (65%), Positives = 424/544 (77%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE MDGT ++K+ VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEELMDGTVALKDLHVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV+VME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNEQGSYVAVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + + D+ LVLSFVG TRVL LSG EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSGEEVEETELP 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +QQTFYCGNV + ++Q+T + L+ +SK VS W+ P G++ISV +CN QV+
Sbjct: 450 GFVDNQQTFYCGNVAHQQLIQITSGSVRLVLQDSKTLVSEWKEPQGRNISVAACNHTQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++ E+KQ++ +E+EVACLDI+PL E P L AVGLWTDI
Sbjct: 510 LAVGRALYYLQILAGELKQISTTEMEHEVACLDITPL-GEGGGESP----LCAVGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LP + KE LGGEIIPRSILMT FEG YLL ALGDG++FYF LD +G L+
Sbjct: 565 SARVLKLPCFTALHKEMLGGEIIPRSILMTTFEGSYYLLCALGDGALFYFGLDLQTGALS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
++KKVTLGTQPTVL+TFRSLST+NVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 ERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
E YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PRRI YQE SQ FGV+++R++IQ+
Sbjct: 685 EGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEIQD 744
Query: 561 ADGST-PVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
G+T VRPSASTQA +++ S+ ST+ F EVEVHNLL++DQ
Sbjct: 745 VSGTTSAVRPSASTQALSSSVSSSKLF--------PSSTSPHETSFGEEVEVHNLLVVDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/285 (65%), Positives = 235/285 (82%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YG+IAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGRIAVMELFRPKGESKDLLFILTS 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + ++++I+T+AHGNV DRIG+PSE GII I+DPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQTGESIDIITRAHGNVQDRIGRPSETGIIGIVDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL++ DV FL+GCQ PT+ I+QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNRELKAFNIRLEELQVIDVHFLYGCQAPTVCFIYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VIPVPEP GGAIIIGQESI YH+G Y+A+AP IK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHNGDKYLAIAPPTIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE MDGT ++K+ VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEELMDGTVALKDLHVELLGE 307
Score = 369 bits (948), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 164/227 (72%), Positives = 199/227 (87%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
ST+ F EVEVHNLL++DQ+TFE+LHAHQ P EYALSL+S + G+DP+ YF++GT
Sbjct: 774 STSPHETSFGEEVEVHNLLVVDQHTFEVLHAHQFLPSEYALSLVSCRLGKDPSVYFIVGT 833
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
A+V+PEE EPKQGRII+FHY DGKLQ +AEKE+KGA YSM EFNGK LASINSTVRL+EW
Sbjct: 834 AMVYPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKFLASINSTVRLYEW 893
Query: 1110 TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
T EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK+MEG+FEEI+RD+NPNW
Sbjct: 894 TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKSMEGNFEEIARDFNPNW 953
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
M+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 954 MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + + D+ LVLSFVG TRVL LSG E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELPGF 451
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 58/81 (71%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YG+IAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGRIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K I +T
Sbjct: 82 SKYNACILEYKQTGESIDIIT 102
>gi|405970039|gb|EKC34976.1| DNA damage-binding protein 1 [Crassostrea gigas]
Length = 1160
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/543 (65%), Positives = 423/543 (77%), Gaps = 13/543 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFML+LEKEEKMD T +VK+ KVELLGE +I EC+TYLDN VV++GSRLG
Sbjct: 291 RYLLGDMMGRLFMLMLEKEEKMDSTVTVKDLKVELLGETTIAECITYLDNAVVYIGSRLG 350
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN PDENG+YV ME FTNL PI+DM VVDLERQGQGQLVTCSG +KEGSLRI
Sbjct: 351 DSQLVKLNVEPDENGSYVQEMERFTNLGPILDMCVVDLERQGQGQLVTCSGAYKEGSLRI 410
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKGIW+L + SP+ DN +VLSFVG TRVL L+G EVEETE+
Sbjct: 411 IRNGIGIHEHASIDLPGIKGIWSLRVNSPE-YDNMIVLSFVGQTRVLMLNGEEVEETELS 469
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
G SDQQTF C NV +LQ+TP + LIS +++ + W+ GK+IS+ S N QV+
Sbjct: 470 GIESDQQTFLCANVVHNQLLQITPQSVRLISCDNQKLLKEWKHSGGKNISLASSNTCQVV 529
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
G ++YYLE+ +IKQ++ +E+EVAC+D++PL E K+ L A+GLWTDI
Sbjct: 530 ACVGSELYYLELLQGDIKQVSTSTMEHEVACVDLTPLREGE-----EKSHLCAIGLWTDI 584
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+LSLP + E LGGEIIPRSILMT FEG YLL ALGDGS+FYF+ + +G T
Sbjct: 585 SARVLSLPDFNSLHVEMLGGEIIPRSILMTTFEGIHYLLCALGDGSLFYFNFNIDTGYFT 644
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
+K+KVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMC LN+
Sbjct: 645 EKRKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCPLNS 704
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
E YPDSLALA D T T GTIDEIQKLHIRT+PLGE+PRRIAYQESSQTFGVI+ R+D+Q+
Sbjct: 705 EGYPDSLALANDGTLTIGTIDEIQKLHIRTIPLGESPRRIAYQESSQTFGVISMRMDLQD 764
Query: 561 ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQN 620
++G P RPSAST A +SS+ ++ + S + EVEVH+LLIIDQ+
Sbjct: 765 SNGLNPTRPSASTHAAMMSSSSSGKVTMGTSTMGEHSAGD-------EVEVHSLLIIDQH 817
Query: 621 TFE 623
TFE
Sbjct: 818 TFE 820
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/305 (62%), Positives = 237/305 (77%), Gaps = 21/305 (6%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL++A+N R+EI+ VTPEGLRPVKE+ +YG+IAVM+ FR P + KDL+F++TQR
Sbjct: 24 TSPDDLNLIIARNTRMEIYVVTPEGLRPVKEVGVYGRIAVMELFRPPGESKDLMFLLTQR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNAMILEC + +N++I+T+AHGNV D+IG+ SE GII IIDP RVIGLRLY+GLFK+I
Sbjct: 84 YNAMILECNQNGENIDIITRAHGNVQDKIGRASETGIIGIIDPLCRVIGLRLYDGLFKVI 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIH--------------------- 842
PLE+DN ELKA +IR+EEL + D+QFLHGC PT+I IH
Sbjct: 144 PLERDNKELKAFNIRLEELTVIDIQFLHGCTTPTLILIHQANLNCYHLMTLCITNLLSFK 203
Query: 843 QDVNGRHVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSG 902
QD +GRHVKT+EISL++KEF K PWKQDN+E EA ++I VPEP GGA+IIGQESI YH G
Sbjct: 204 QDQHGRHVKTYEISLRDKEFQKGPWKQDNVETEACMLIAVPEPFGGALIIGQESITYHKG 263
Query: 903 KSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKV 962
+++ +AP IK ST+ CY KVDANG RYLLGD+ GRLFML+LEKEEKMD T +VK+ KV
Sbjct: 264 DNFIPIAPPAIKQSTLTCYGKVDANGSRYLLGDMMGRLFMLMLEKEEKMDSTVTVKDLKV 323
Query: 963 ELLGE 967
ELLGE
Sbjct: 324 ELLGE 328
Score = 355 bits (912), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 162/216 (75%), Positives = 194/216 (89%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
EVEVH+LLIIDQ+TFE+LH+HQL P E+A SLIS++ GEDP Y+++GTA+VHPEE EPK
Sbjct: 805 EVEVHSLLIIDQHTFEVLHSHQLMPNEFATSLISARLGEDPCNYYIVGTALVHPEEAEPK 864
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECS 1120
QGRI+IFH+ +GKL QIAEKEIKGA Y++ EFNGKLLASINSTVRLFEWT +KELRLEC+
Sbjct: 865 QGRIVIFHFHEGKLNQIAEKEIKGAAYTLVEFNGKLLASINSTVRLFEWTTDKELRLECN 924
Query: 1121 HFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDEL 1180
+FN+I+AL+LK KGDFILVGDLMRS+TLL YK MEG+FEEI+RD NPNW T++EILDD+
Sbjct: 925 YFNSIVALYLKTKGDFILVGDLMRSITLLLYKPMEGTFEEIARDCNPNWTTAVEILDDDN 984
Query: 1181 FLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
FLGAENS+NLF CQKDSA+T+DEDR +LQEVG HL
Sbjct: 985 FLGAENSFNLFTCQKDSASTTDEDRQNLQEVGMFHL 1020
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 60/81 (74%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS DLNL++A+N R+EI+ VTPEGLRPVKE+ +YG+IAVM+ FR P + KDL+F++T
Sbjct: 22 NFTSPDDLNLIIARNTRMEIYVVTPEGLRPVKEVGVYGRIAVMELFRPPGESKDLMFLLT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
QR + ++ N I +T
Sbjct: 82 QRYNAMILECNQNGENIDIIT 102
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
EGSLRIIRNGIGI EHA IDLPGIKGIW+L + SP+ DN +VLSFVG TRVL L+G E
Sbjct: 405 EGSLRIIRNGIGIHEHASIDLPGIKGIWSLRVNSPE-YDNMIVLSFVGQTRVLMLNGEE 462
>gi|385865228|gb|AFI92852.1| DNA damage-binding protein 1 [Danio rerio]
Length = 1140
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/544 (65%), Positives = 425/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE MDG +K+ VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEELMDGAVVLKDLHVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN ++ G+YV VME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNDQGSYVGVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L S ++ D+ LVLSFVG TRVL LSG EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSESSRDTDDMLVLSFVGQTRVLMLSGEEVEETELQ 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +QQTF+CGNV + ++Q+T + L++ +SKA VS W+ P G++ISV SCN QV+
Sbjct: 450 GFVDNQQTFFCGNVAHQQLIQITSVSVRLVTQDSKALVSEWKEPQGRNISVASCNNTQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++ E+KQ++ +E+EVACLDI+PL A + + AVGLWTDI
Sbjct: 510 LAVGRVLYYLQILSGELKQISSTEMEHEVACLDITPLGE-----RTADSCICAVGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SARLL LP + KE LGGEIIPRSILMT FEG YLL ALGDG++FYF LD +G L+
Sbjct: 565 SARLLKLPCFTPLHKEMLGGEIIPRSILMTTFEGSHYLLCALGDGALFYFGLDIQTGVLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
++KKVTLGTQPTVL+TFRSLST+NVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 ERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
E YPDSLALA +ST T GTIDEIQKLHIRTVPL E+P+RI YQE SQ FGV+++R+++Q+
Sbjct: 685 EGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPKRICYQEVSQCFGVLSSRVEMQD 744
Query: 561 ADGST-PVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
A G+T VRPSASTQA +++ S+ ST+ F EVEVH+LL++DQ
Sbjct: 745 ASGTTAAVRPSASTQALSSSVSSSKLF--------PSSTSPHETSFGEEVEVHSLLVVDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/284 (67%), Positives = 235/284 (82%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T +
Sbjct: 24 TSAEDLNLLIAKNTRLEIYAVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNA ILE + D+++I+T+AHGNV DRIG+PSE GII I+DPE R+IGLRLY+GLFK+I
Sbjct: 84 YNACILEYKQSGDSIDIITRAHGNVQDRIGRPSETGIIGIVDPECRMIGLRLYDGLFKVI 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+++N ELKA +IR+EEL++ DVQFL+GCQ PT+ I+QD GRHVKT+E+SL+EKEF
Sbjct: 144 PLDRENRELKAFNIRLEELQVIDVQFLYGCQAPTVCFIYQDPQGRHVKTYEVSLREKEFN 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PWKQ+N+E EAS+VIPVPEP GGAIIIGQESI YH+G Y+AVAP IIK STIVC+ +
Sbjct: 204 KGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHNGDKYLAVAPPIIKQSTIVCHNR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD NG RYLLGD+ GRLFMLLLEKEE MDG +K+ VELLGE
Sbjct: 264 VDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDLHVELLGE 307
Score = 365 bits (938), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 164/227 (72%), Positives = 196/227 (86%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
ST+ F EVEVH+LL++DQ+TFE+LHAHQ EYALS++S K G DP YF++GT
Sbjct: 774 STSPHETSFGEEVEVHSLLVVDQHTFEVLHAHQFLQNEYALSMVSCKLGRDPAVYFIVGT 833
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
A+V+PEE EPKQGRII+FHY DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EW
Sbjct: 834 AMVYPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEW 893
Query: 1110 TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
T EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEGSFEEI+RD+NPNW
Sbjct: 894 TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGSFEEIARDFNPNW 953
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
M+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 954 MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1000
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 51/68 (75%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L S ++ D+ LVLSFVG TRVL LSG E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSESSRDTDDMLVLSFVGQTRVLMLSGEEV 443
Query: 61 GFHLLRGF 68
L+GF
Sbjct: 444 EETELQGF 451
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYAVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGDSIDIIT 102
>gi|260790329|ref|XP_002590195.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
gi|229275385|gb|EEN46206.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
Length = 1152
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/553 (64%), Positives = 433/553 (78%), Gaps = 25/553 (4%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD++GRLFMLLLEKEE +DG+ +VK+ KVELLGE SI ECLTYLDNGVV++GSRLG
Sbjct: 270 RYLLGDMSGRLFMLLLEKEELIDGSVTVKDLKVELLGETSIAECLTYLDNGVVYLGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KLN D++G+YV VME+FTNL PI+DM VVDLERQGQGQLVTCSG +KEGSLRI
Sbjct: 330 DSQLIKLNVDADDSGSYVHVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAYKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKGIW L + +D+TLVL+FVG TRVL LSG EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGIWPLCVDPNGTMDDTLVLAFVGQTRVLLLSGEEVEETELP 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF D+QTF+CGNV +LQ+T ++ L+S ++K VS W+PP+ K+ISV S N QV+
Sbjct: 450 GF-EDKQTFFCGNVMGGQLLQITAASVRLVSRQTKQLVSEWKPPSEKNISVASSNTTQVV 508
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
CA G VYY+E+H E+KQL + EVACLD++PL E S +A L AVGLWTDI
Sbjct: 509 CAVGQVVYYIEIHEGELKQLGETVMAREVACLDVTPLV--EGSD---RAHLCAVGLWTDI 563
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGR-- 438
SA +L LP+LE + E LGGEIIPRSILMT FEG YLL ALGDGS+FYF+L+P +G+
Sbjct: 564 SAHMLQLPNLEPMHVEMLGGEIIPRSILMTTFEGIHYLLCALGDGSLFYFNLNPETGKNF 623
Query: 439 ----LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNH 494
LT K KVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+
Sbjct: 624 SLHILTIKSKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNY 683
Query: 495 MCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
MC LN++ YPDSLAL DST T GTIDEIQKLHIRTVPL E+PRRIAYQE+SQTFGV++T
Sbjct: 684 MCPLNSQGYPDSLALTNDSTLTIGTIDEIQKLHIRTVPLYESPRRIAYQETSQTFGVLST 743
Query: 555 RIDIQEADGST---PVRPSASTQAQNTTSSTISSLSYIKPGSTK-QSTANQPADFNMEVE 610
R ++++A G + PVRPSAST A +T+ + P +S+ + F E+E
Sbjct: 744 RTEVEDASGGSGTQPVRPSASTTALSTS---------VSPNKNALRSSNDSDGAFGEEIE 794
Query: 611 VHNLLIIDQNTFE 623
+H+LL++DQ+TFE
Sbjct: 795 IHSLLVVDQHTFE 807
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 189/280 (67%), Positives = 239/280 (85%)
Query: 688 DLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
DLNL++AKN R+EI+ VTPEGLRPVKE+ YG+IAVM+ FR P + KDLLFI+T RYNA
Sbjct: 28 DLNLIIAKNTRLEIYLVTPEGLRPVKEVGCYGRIAVMELFRPPGETKDLLFILTARYNAC 87
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
ILE + D D++ I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+IPL++
Sbjct: 88 ILEYKQDGDDVSIVTRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDR 147
Query: 808 DNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTPW 867
DN ELKA +IR+EEL + DV+FL+GCQ PT++ ++QD +GRHVKT+EIS+++KEF+K PW
Sbjct: 148 DNRELKAFNIRLEELNVIDVKFLYGCQVPTVVFVYQDPHGRHVKTYEISVRDKEFSKGPW 207
Query: 868 KQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDAN 927
KQDN+E EAS+VI VPEP G++IIGQESI YH+G YVAVAP IK ST++C+ +VDAN
Sbjct: 208 KQDNVETEASMVIAVPEPFCGSLIIGQESITYHNGDKYVAVAPPAIKQSTLICHGRVDAN 267
Query: 928 GERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
G RYLLGD++GRLFMLLLEKEE +DG+ +VK+ KVELLGE
Sbjct: 268 GSRYLLGDMSGRLFMLLLEKEELIDGSVTVKDLKVELLGE 307
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 161/228 (70%), Positives = 199/228 (87%)
Query: 989 QSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLG 1048
+S+ + F E+E+H+LL++DQ+TFEILHAHQL E+ALS++S K G+DPNTYF++G
Sbjct: 780 RSSNDSDGAFGEEIEIHSLLVVDQHTFEILHAHQLLKDEFALSMVSCKLGDDPNTYFIIG 839
Query: 1049 TAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFE 1108
TA+V+PEE+EPK GRII+F Y DGKLQQ+AEKE+KGA YS+ +FN KLLASINSTVRLFE
Sbjct: 840 TAMVYPEESEPKSGRIIVFQYTDGKLQQVAEKEVKGAVYSLVQFNNKLLASINSTVRLFE 899
Query: 1109 WTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPN 1168
WT EKELR+EC+H+NNI+AL+LK KGDFILVGDLMRS+TLL YK MEG FEEI+RD+NPN
Sbjct: 900 WTAEKELRVECNHYNNILALYLKTKGDFILVGDLMRSVTLLAYKPMEGCFEEIARDFNPN 959
Query: 1169 WMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
WM+++EILDD+ FLGAENS+N F CQKDSAAT+DE+R HLQEVG HL
Sbjct: 960 WMSAVEILDDDNFLGAENSFNFFTCQKDSAATTDEERQHLQEVGHFHL 1007
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 66/108 (61%), Gaps = 13/108 (12%)
Query: 598 TANQPADFNMEVEVHNLLIIDQNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKE 657
TA++P N V H FT DLNL++AKN R+EI+ VTPEGLRPVKE
Sbjct: 8 TAHKPTAVNACVTGH-------------FTGPEDLNLIIAKNTRLEIYLVTPEGLRPVKE 54
Query: 658 IFLYGKIAVMKFFRGPTDKKDLLFIITQRTDLNLVVAKNNRIEIHTVT 705
+ YG+IAVM+ FR P + KDLLFI+T R + ++ K + ++ VT
Sbjct: 55 VGCYGRIAVMELFRPPGETKDLLFILTARYNACILEYKQDGDDVSIVT 102
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 53/77 (68%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKGIW L + +D+TLVL+FVG TRVL LSG E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGIWPLCVDPNGTMDDTLVLAFVGQTRVLLLSGEEV 443
Query: 61 GFHLLRGFSSLGSLWNG 77
L GF + + G
Sbjct: 444 EETELPGFEDKQTFFCG 460
>gi|259155222|ref|NP_001158852.1| DNA damage-binding protein 1 [Salmo salar]
gi|223647700|gb|ACN10608.1| DNA damage-binding protein 1 [Salmo salar]
Length = 1139
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/544 (64%), Positives = 426/544 (78%), Gaps = 15/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE MDG +K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEELMDGAVVLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +++G+YV+VME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNDSGSYVAVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + + D+ LVLSFVG TRVL LSG EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSGEEVEETELP 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF + QTFYCGNV + ++Q+T L+ +SKA VS W+ P G++ISV +CN +QV+
Sbjct: 450 GFVDNLQTFYCGNVAHQQLIQITSGGVRLVMQDSKALVSEWKEPQGRNISVAACNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++ E+KQ++ +E+EVACLDI+PL E ++ L AVGLWTDI
Sbjct: 510 LAVGRALYYLQILSGELKQISTVEMEHEVACLDITPL------GEGGESPLCAVGLWTDI 563
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LP + KE LGGEIIPRSILMT FEG YLL ALGDG++FYF LD +G L+
Sbjct: 564 SARVLKLPCFTALHKEMLGGEIIPRSILMTTFEGGYYLLCALGDGALFYFGLDLTTGVLS 623
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
++KKVTLGTQPTVL+TFRSLST+NVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 624 ERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 683
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
E YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PRRI YQE SQ FGV+++R+++Q+
Sbjct: 684 EGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEMQD 743
Query: 561 ADGST-PVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
A G+T VRPSASTQA +++ S+ ST+ F EVEVH+LL++DQ
Sbjct: 744 ASGTTAAVRPSASTQALSSSVSSSKLFP--------SSTSPHETSFGEEVEVHSLLVVDQ 795
Query: 620 NTFE 623
+TFE
Sbjct: 796 HTFE 799
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/285 (65%), Positives = 235/285 (82%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + + ++++I+T+AHGNV DRIG+PSE GII I+DPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQNGESIDIITRAHGNVQDRIGRPSETGIIGIVDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL+++N ELKA +IR+EEL++ DV FL+GCQ PT+ I+QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRENRELKAFNIRLEELQVIDVHFLYGCQAPTVCFIYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VIPVPEP GGAIIIGQESI YH+G Y+A+AP IK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHNGDKYLAIAPPTIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE MDG +K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDLRVELLGE 307
Score = 363 bits (933), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 162/227 (71%), Positives = 196/227 (86%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
ST+ F EVEVH+LL++DQ+TFE+LHAHQ EYALS++S + G DP YF++GT
Sbjct: 773 STSPHETSFGEEVEVHSLLVVDQHTFEVLHAHQFLQSEYALSMVSCRLGRDPAVYFIVGT 832
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
A+V+PEE EPKQGRII+FHY DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EW
Sbjct: 833 AMVYPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEW 892
Query: 1110 TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
T EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNW
Sbjct: 893 TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 952
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
M+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 953 MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHL 999
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K N I +T
Sbjct: 82 AKYNACILEYKQNGESIDIIT 102
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + + D+ LVLSFVG TRVL LSG E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELPGF 451
>gi|410912407|ref|XP_003969681.1| PREDICTED: DNA damage-binding protein 1-like [Takifugu rubripes]
Length = 1140
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/544 (64%), Positives = 425/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE MDGT ++K+ VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEELMDGTVALKDLHVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
D QLVKLN ++ G++V+VME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DPQLVKLNVDSNDQGSFVTVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + + D+ LVLSFVG TRVL LSG EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSGEEVEETELP 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +QQTFYCGNV ++Q+T + L+ +SKA VS W+ P G++ISV +CN QV+
Sbjct: 450 GFVDNQQTFYCGNVAHNQLIQITSGSVRLVLQDSKALVSEWKEPQGRNISVAACNHTQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++ E+KQ++ +E+EVACLDI+PL A++ L AVGLWTDI
Sbjct: 510 LAVGRALYYLQILAGELKQISTTEMEHEVACLDITPLGE-----AGAESPLCAVGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LP + KE LGGEIIPRSILMT FEG YLL ALGDG++FYF LD +G L+
Sbjct: 565 SARVLKLPCFTPLHKEMLGGEIIPRSILMTTFEGSYYLLCALGDGALFYFGLDLQTGALS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
+ KKVTLGTQPTVL+TFRSLST+NVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 ECKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
E YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PRRI YQE SQ FGV+++R++IQ+
Sbjct: 685 EGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEIQD 744
Query: 561 ADGST-PVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
G+T PVRPSASTQA +++ S+ ST+ + F EVE+H+LL++DQ
Sbjct: 745 VSGTTSPVRPSASTQALSSSMSSSKLF--------PSSTSPHESSFGEEVEIHSLLVVDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/285 (65%), Positives = 235/285 (82%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTS 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + + ++++I+T+AHGNV D IG+PSE GII I+DPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQNGESIDIITRAHGNVKDPIGRPSETGIIGIVDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL++DN ELKA +IR+EEL++ DV FL+GCQ PT+ I+QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRDNRELKAYNIRLEELQVIDVHFLYGCQAPTVCFIYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VIPVPEP GGAIIIGQESI YH+G Y+A+AP IK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHNGDKYLAIAPPTIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE MDGT ++K+ VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEELMDGTVALKDLHVELLGE 307
Score = 371 bits (952), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 165/227 (72%), Positives = 200/227 (88%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
ST+ + F EVE+H+LL++DQ+TFE+LHAHQ P EYALS++S + G+DP+ YFV+GT
Sbjct: 774 STSPHESSFGEEVEIHSLLVVDQHTFEVLHAHQFLPSEYALSMVSCRLGKDPSVYFVVGT 833
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
A+V+PEE EPKQGRII+FHY DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EW
Sbjct: 834 AMVYPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEW 893
Query: 1110 TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
T EKELR ECSH+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNW
Sbjct: 894 TAEKELRTECSHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 953
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
M+++EILDD+ FLGAEN++NLF+CQKDSAAT+DEDR HLQEVG HL
Sbjct: 954 MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEDRQHLQEVGVFHL 1000
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + + D+ LVLSFVG TRVL LSG E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELPGF 451
>gi|223647932|gb|ACN10724.1| DNA damage-binding protein 1 [Salmo salar]
Length = 1139
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/544 (64%), Positives = 424/544 (77%), Gaps = 15/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE MDG +K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEELMDGAVVLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +++G+YV+VME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNDSGSYVAVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L + + D+ LVLSFVG TRVL LSG EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSGEEVEETELP 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF + QTFYCGNV + ++Q+T L+ +SKA VS W+ P G++ISV +CN +QV+
Sbjct: 450 GFVDNLQTFYCGNVAHQQLIQITSGGVRLVMQDSKALVSEWKEPQGRNISVAACNSSQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++ E+KQ++ +E+EVACLDI+PL E + L AVGLWTDI
Sbjct: 510 LAVGRALYYLQILSGELKQISTVEMEHEVACLDITPL------GEDGDSPLCAVGLWTDI 563
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LP + KE LGGEIIPRSILMT FE YLL ALGDG++FYF LD SG L+
Sbjct: 564 SARVLKLPCFTALHKEMLGGEIIPRSILMTTFEASYYLLCALGDGALFYFGLDLTSGVLS 623
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
++KKVTLGTQPTVL+TFRSLST+NVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 624 ERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 683
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
E YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PRRI YQE SQ FGV+++R+++Q+
Sbjct: 684 EGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEMQD 743
Query: 561 ADGST-PVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
A G+T VRPSASTQA +++ S+ ST+ F EVEVH+LL++DQ
Sbjct: 744 ASGTTAAVRPSASTQALSSSVSSSKLF--------PSSTSPHETSFGEEVEVHSLLVVDQ 795
Query: 620 NTFE 623
+TFE
Sbjct: 796 HTFE 799
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/285 (65%), Positives = 235/285 (82%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+YNA ILE + + ++++I+T+AHGNV DRIG+PSE GII I+DPE R+IGLRLY+GLFK+
Sbjct: 83 KYNACILEYKQNGESIDIITRAHGNVQDRIGRPSETGIIGIVDPECRMIGLRLYDGLFKV 142
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL+++N ELKA +IR+EEL++ DV FL+GCQ PT+ I+QD GRHVKT+E+SL+EKEF
Sbjct: 143 IPLDRENRELKAFNIRLEELQVIDVHFLYGCQAPTVCFIYQDPQGRHVKTYEVSLREKEF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQ+N+E EAS+VIPVPEP GGAIIIGQESI YH+G Y+A+AP IK STIVC+
Sbjct: 203 NKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHNGDKYLAIAPPTIKQSTIVCHN 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD NG RYLLGD+ GRLFMLLLEKEE MDG +K+ +VELLGE
Sbjct: 263 RVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDLRVELLGE 307
Score = 360 bits (923), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 161/227 (70%), Positives = 196/227 (86%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
ST+ F EVEVH+LL++DQ+TFE+LHAHQ EYALS++S + G D + YF++GT
Sbjct: 773 STSPHETSFGEEVEVHSLLVVDQHTFEVLHAHQFLQSEYALSMVSCRLGRDLSVYFIVGT 832
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
A+V+PEE EPKQGRII+FHY DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EW
Sbjct: 833 AMVYPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMMEFNGKLLASINSTVRLYEW 892
Query: 1110 TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
T EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNW
Sbjct: 893 TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 952
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
M+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 953 MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHL 999
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K N I +T
Sbjct: 82 AKYNACILEYKQNGESIDIIT 102
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + + D+ LVLSFVG TRVL LSG E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSGEEV 443
Query: 61 GFHLLRGF 68
L GF
Sbjct: 444 EETELPGF 451
>gi|47230701|emb|CAF99894.1| unnamed protein product [Tetraodon nigroviridis]
Length = 953
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/553 (64%), Positives = 426/553 (77%), Gaps = 23/553 (4%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE MDGT ++K+ VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 131 RYLLGDMEGRLFMLLLEKEELMDGTVALKDLHVELLGETSIAECLTYLDNGVVFVGSRLG 190
Query: 141 DSQLVK---------LNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSG 191
DSQLVK LN ++ G++V+VME+FTNL PI+DM VVDLERQGQGQLVTCSG
Sbjct: 191 DSQLVKVRVTHSLSELNVDSNDQGSFVTVMETFTNLGPIVDMCVVDLERQGQGQLVTCSG 250
Query: 192 GFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSG 251
FKEGSLRIIRNGIGI EHA IDLPGIKG+W L + + D+ LVLSFVG TRVL LSG
Sbjct: 251 AFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSG 310
Query: 252 AEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISV 311
EVEETE+ GF +QQTFYCGNV ++Q+T + L+ +SKA VS W P G++ISV
Sbjct: 311 EEVEETELPGFVDNQQTFYCGNVAHNQLIQITSGSVRLVLQDSKALVSEWREPQGRNISV 370
Query: 312 VSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQL 371
+CN QV+ A G +YYL++ E+KQ++ +E+EVACLDI+PL A++ L
Sbjct: 371 AACNHTQVVLAVGRALYYLQILAGELKQISTTEMEHEVACLDITPLGEA-----GAESPL 425
Query: 372 AAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFS 431
AVGLWTDISAR+L LP + KE LGGEIIPRSILMT FEG YLL ALGDG++FYF
Sbjct: 426 CAVGLWTDISARVLKLPCFTALHKEMLGGEIIPRSILMTTFEGSYYLLCALGDGALFYFG 485
Query: 432 LDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQ 491
LD +G L+++KKVTLGTQPTVL+TFRSLST+NVFACSDRPTVIYSSNHKLVFSNVNL++
Sbjct: 486 LDLQTGALSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKE 545
Query: 492 VNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
VN+MC LN+E YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PRRI YQE SQ FGV
Sbjct: 546 VNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGV 605
Query: 552 ITTRIDIQEADGST-PVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVE 610
+++R++IQ+ G+T PVRPSASTQA +++ S+ ST+ + F EVE
Sbjct: 606 LSSRMEIQDVSGTTSPVRPSASTQALSSSVSSSKLF--------PSSTSPHESSFGEEVE 657
Query: 611 VHNLLIIDQNTFE 623
VHNLL++DQ+TFE
Sbjct: 658 VHNLLVVDQHTFE 670
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/227 (54%), Positives = 151/227 (66%), Gaps = 50/227 (22%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
ST+ + F EVEVHNLL++DQ+TFE+LHAHQ P EYALSL+S + G+DP+
Sbjct: 644 STSPHESSFGEEVEVHNLLVVDQHTFEVLHAHQFLPSEYALSLVSCRLGKDPS------- 696
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
LQ I + C F VRL+EW
Sbjct: 697 ------------------------LQTIPNE---------CVFQ----------VRLYEW 713
Query: 1110 TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
T EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNW
Sbjct: 714 TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 773
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
M++IEILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 774 MSAIEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHL 820
Score = 243 bits (621), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 137/167 (82%)
Query: 801 KIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEK 860
K+IPL+ DN E KA +IR+EEL++ DV FL+GCQ PT+ I+QD GRHVKT+E+SL +K
Sbjct: 2 KMIPLDGDNREWKAYNIRLEELQVIDVHFLYGCQAPTVCFIYQDPQGRHVKTYEVSLADK 61
Query: 861 EFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVC 920
EF K PWKQ+N+E EAS+VIPVPEP GGAIIIGQESI YH+G Y+A+AP IK STIVC
Sbjct: 62 EFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHNGDKYLAIAPPTIKQSTIVC 121
Query: 921 YAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+ +VD NG RYLLGD+ GRLFMLLLEKEE MDGT ++K+ VELLGE
Sbjct: 122 HNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGTVALKDLHVELLGE 168
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + + D+ LVLSFVG TRVL LSG E
Sbjct: 254 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSGEEV 313
Query: 61 GFHLLRGF 68
L GF
Sbjct: 314 EETELPGF 321
>gi|41055225|ref|NP_956920.1| DNA damage-binding protein 1 [Danio rerio]
gi|34784892|gb|AAH56837.1| Zgc:63840 [Danio rerio]
Length = 897
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/544 (65%), Positives = 427/544 (78%), Gaps = 14/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE MDG +K+ VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDMEGRLFMLLLEKEELMDGAVVLKDLHVELLGETSIAECLTYLDNGVVFVGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN ++ G+YV VME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 330 DSQLVKLNVDSNDQGSYVGVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 389
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI EHA IDLPGIKG+W L S ++ D+ LVLSFVG TRVL LSG EVEETE+
Sbjct: 390 IRNGIGIHEHASIDLPGIKGLWPLRSESSRDTDDMLVLSFVGQTRVLMLSGEEVEETELQ 449
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF +QQTF+CGNV + ++Q+T + L++ +SKA VS W+ P G++ISV SCN QV+
Sbjct: 450 GFVDNQQTFFCGNVAHQQLIQITSVSVRLVTQDSKALVSEWKEPQGRNISVASCNNTQVV 509
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++ E+KQ++ +E+EVACLDI+PL E T A + + AVGLWTDI
Sbjct: 510 LAVGRVLYYLQILSGELKQISSTEMEHEVACLDITPL-GERT----ADSCICAVGLWTDI 564
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SARLL LP + KE LGGEIIPRSILMT FEG YLL ALGDG++FYF LD +G L+
Sbjct: 565 SARLLKLPCFTPLHKEMLGGEIIPRSILMTTFEGSHYLLCALGDGALFYFGLDIQTGVLS 624
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
++KKVTLGTQPTVL+TFRSLST+NVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 625 ERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 684
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
E YPDSLALA +ST T GTIDEIQKLHIRTVPL E+P+RI YQE SQ FGV+++R+++Q+
Sbjct: 685 EGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPKRICYQEVSQCFGVLSSRVEMQD 744
Query: 561 ADGST-PVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
A G+T VRPSASTQA +++ S+ ST+ F EVEVH+LL++DQ
Sbjct: 745 ASGTTAAVRPSASTQALSSSVSSSK--------LLPSSTSPHETSFGEEVEVHSLLVVDQ 796
Query: 620 NTFE 623
+TFE
Sbjct: 797 HTFE 800
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/284 (67%), Positives = 235/284 (82%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T +
Sbjct: 24 TSAEDLNLLIAKNTRLEIYAVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNA ILE + D+++I+T+AHGNV DRIG+PSE GII I+DPE R+IGLRLY+GLFK+I
Sbjct: 84 YNACILEYKQSGDSIDIITRAHGNVQDRIGRPSETGIIGIVDPECRMIGLRLYDGLFKVI 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+++N ELKA +IR+EEL++ DVQFL+GCQ PT+ I+QD GRHVKT+E+SL+EKEF
Sbjct: 144 PLDRENRELKAFNIRLEELQVIDVQFLYGCQAPTVCFIYQDPQGRHVKTYEVSLREKEFN 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K PWKQ+N+E EAS+VIPVPEP GGAIIIGQESI YH+G Y+AVAP IIK STIVC+ +
Sbjct: 204 KGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHNGDKYLAVAPPIIKQSTIVCHNR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD NG RYLLGD+ GRLFMLLLEKEE MDG +K+ VELLGE
Sbjct: 264 VDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDLHVELLGE 307
Score = 189 bits (480), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 84/116 (72%), Positives = 99/116 (85%)
Query: 998 FNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEEN 1057
F EVEVH+LL++DQ+TFE+LHAHQ EYALS++S K G DP YF++GTA+V+PEE
Sbjct: 782 FGEEVEVHSLLVVDQHTFEVLHAHQFLQNEYALSMVSCKLGRDPAVYFIVGTAMVYPEEA 841
Query: 1058 EPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK 1113
EPKQGRII+FHY DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT EK
Sbjct: 842 EPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEK 897
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 51/68 (75%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L S ++ D+ LVLSFVG TRVL LSG E
Sbjct: 384 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSESSRDTDDMLVLSFVGQTRVLMLSGEEV 443
Query: 61 GFHLLRGF 68
L+GF
Sbjct: 444 EETELQGF 451
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYAVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGDSIDIIT 102
>gi|193644722|ref|XP_001942922.1| PREDICTED: DNA damage-binding protein 1-like [Acyrthosiphon pisum]
Length = 1156
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/546 (59%), Positives = 419/546 (76%), Gaps = 11/546 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+AG LFMLLL E+ DGTF +K+PKV+LLGEISIPE LTYLDN +++V SR+G
Sbjct: 272 RYLLGDMAGHLFMLLLNYEKNPDGTFKIKDPKVDLLGEISIPESLTYLDNKIIYVASRVG 331
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KLN+ PD+ G++++V+++F NL PI+DM V+DLERQGQGQ+VTCSG +KEGSLRI
Sbjct: 332 DSQLIKLNKKPDQFGSHITVLDTFMNLGPIVDMCVIDLERQGQGQVVTCSGAYKEGSLRI 391
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI+E A IDL GIKG+W L I + LD+TLVLSFVGH+RVL SG EVEE ++
Sbjct: 392 IRNGIGIQEVATIDLVGIKGMWPLRITTDSLLDDTLVLSFVGHSRVLAYSGEEVEEIDLE 451
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF S+ QTFYCGN ++Q+T ++ LI ESK VS W P+GKSI+VVSCN +Q +
Sbjct: 452 GFQSELQTFYCGNTSDNKMVQITSASVRLICLESKCLVSEWNVPDGKSINVVSCNGHQAV 511
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
CATG +YY+E+ ++ Q LE+EV+CLD+ NE + + L AVGLW DI
Sbjct: 512 CATGNSLYYIEIGTDKVDQKGFITLEHEVSCLDVCSFKNEFYKN----SSLVAVGLWMDI 567
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
S ++L LP E+ +EPLG EIIPRSILM FE YLL ALGDGS+ YF L+P +G L+
Sbjct: 568 SVKILQLPDFVELVREPLGEEIIPRSILMVTFENIDYLLCALGDGSLCYFHLNPENGVLS 627
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
DK+KV LGTQPT+++ F+SL+TT+VFACSD PTVIYSSN+KL+FSNVNLR+VNHMCSLN
Sbjct: 628 DKRKVNLGTQPTLIRKFQSLATTSVFACSDHPTVIYSSNNKLIFSNVNLRKVNHMCSLNT 687
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+SYPDSLA+ATD+ GTIDE+QKLHIRT+PLGEAPRRIA+QESS++FG+IT RID+ E
Sbjct: 688 KSYPDSLAMATDTAIIIGTIDEMQKLHIRTIPLGEAPRRIAHQESSKSFGIITMRIDVHE 747
Query: 561 ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQ---PADFNMEVEVHNLLII 617
P RPSAST AQN + + + + P + +NQ +++ +EVE+HN+L++
Sbjct: 748 GINLVPARPSASTSAQNISGAINNRM----PNNASAVNSNQGPLSSEYGLEVEIHNMLVL 803
Query: 618 DQNTFE 623
DQNTFE
Sbjct: 804 DQNTFE 809
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/288 (65%), Positives = 233/288 (80%), Gaps = 8/288 (2%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TD NL+VA+ NRI+I VT EGL+P+KEI LYGKI +MK FR KDLLF++T R
Sbjct: 26 TSPTDRNLLVARFNRIDISLVTEEGLQPIKEIALYGKIEIMKVFRPKHKDKDLLFVVTAR 85
Query: 744 YNAMILEC----RGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGL 799
YN MILEC GDID I+TKAHGN+SD+IGK SE G +A+IDP ARVIGL+LY+GL
Sbjct: 86 YNTMILECVQTESGDID---IITKAHGNISDQIGKISEIGAMAVIDPSARVIGLKLYDGL 142
Query: 800 FKIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKE 859
FKIIPL+K+ ELKA +RMEE+E+QD+ FL+GC NPTII IHQD GRH+K E+S+K+
Sbjct: 143 FKIIPLDKEG-ELKAYCLRMEEVEVQDIDFLYGCANPTIIIIHQDTMGRHIKAKELSIKD 201
Query: 860 KEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIV 919
KEF KTPWKQ+N+E EAS++IPVPEPL GAIIIG+ES+LYH+G S++A++P +IK STIV
Sbjct: 202 KEFVKTPWKQENVETEASMIIPVPEPLCGAIIIGRESVLYHNGSSFIAISPPVIKQSTIV 261
Query: 920 CYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
CYA++D G RYLLGD+AG LFMLLL E+ DGTF +K+PKV+LLGE
Sbjct: 262 CYARIDPEGTRYLLGDMAGHLFMLLLNYEKNPDGTFKIKDPKVDLLGE 309
Score = 348 bits (893), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 161/237 (67%), Positives = 194/237 (81%), Gaps = 5/237 (2%)
Query: 984 PGSTKQSTANQ---PADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGED 1040
P + +NQ +++ +EVE+HN+L++DQNTFE+LHAHQL EYALS+IS+K G+D
Sbjct: 774 PNNASAVNSNQGPLSSEYGLEVEIHNMLVLDQNTFEVLHAHQLNSNEYALSIISAKLGDD 833
Query: 1041 PNTYFVLGTAVVHPEENEPKQGRIIIFHYDDG--KLQQIAEKEIKGACYSMCEFNGKLLA 1098
P TY++LGTAVV+PE+ +PK GRI+IFH+DD KL I EKE+KGACY M EFNGKLLA
Sbjct: 834 PATYYILGTAVVNPEDQDPKLGRILIFHWDDSSSKLTPITEKEVKGACYGMAEFNGKLLA 893
Query: 1099 SINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSF 1158
++N TVRLFEWT EKELRLECSHFNNI+ALF+K KGDFI+ GDLMRSLTLLQYKTMEGSF
Sbjct: 894 AVNCTVRLFEWTAEKELRLECSHFNNIVALFVKTKGDFIVCGDLMRSLTLLQYKTMEGSF 953
Query: 1159 EEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVH 1215
EEI+RDYNP W T+IEI+DD++FLGAEN NLFI KDS TSDE R LQE+G H
Sbjct: 954 EEIARDYNPKWSTAIEIIDDDVFLGAENDKNLFIIHKDSTLTSDEARHQLQEIGQFH 1010
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 51/70 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI+E A IDL GIKG+W L I + LD+TLVLSFVGH+RVL SG E
Sbjct: 386 EGSLRIIRNGIGIQEVATIDLVGIKGMWPLRITTDSLLDDTLVLSFVGHSRVLAYSGEEV 445
Query: 61 GFHLLRGFSS 70
L GF S
Sbjct: 446 EEIDLEGFQS 455
>gi|195500686|ref|XP_002097479.1| GE26244 [Drosophila yakuba]
gi|194183580|gb|EDW97191.1| GE26244 [Drosophila yakuba]
Length = 1140
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/544 (63%), Positives = 423/544 (77%), Gaps = 13/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLG++ G+L+ML L E G +VK+ KVE LGEISIPEC+TYLDNG +++G+R G
Sbjct: 270 RYLLGNMDGQLYMLFLGTSETSKGV-TVKDIKVEQLGEISIPECITYLDNGFLYIGARHG 328
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLV+LN S +G+YV +E+FTNLAPI+D+ VVDL+RQGQGQ++TCSG FK+GSLRI
Sbjct: 329 DSQLVRLN-SEAIDGSYVVPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRI 387
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKN-LDNTLVLSFVGHTRVLTLSGAEVEETEM 259
IR GIGI+EHACIDLPGIKG+W+L +G ++ +NTLVL+FVGHTR+LTLSG EVEETE+
Sbjct: 388 IRIGIGIQEHACIDLPGIKGMWSLKVGVDESPYENTLVLAFVGHTRILTLSGEEVEETEI 447
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF SD QTF C NVD V+QVT + L+S+ +KA V+ W P +SI VVSCN Q+
Sbjct: 448 PGFASDLQTFLCSNVDYDQVIQVTSDSVRLVSSATKALVAEWRPTGDRSIGVVSCNTTQI 507
Query: 320 LCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379
+ A+ CD++Y+ + +++ + R LEYEVACLDI+PL +T K+ L AVGLWTD
Sbjct: 508 VVASACDIFYIVIEDGSLREQSRRTLEYEVACLDITPLDETQT-----KSDLVAVGLWTD 562
Query: 380 ISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRL 439
ISA ++SLP L+ + E L GEIIPRSILMT FEG YLL ALGDGSM+YF +D +G+L
Sbjct: 563 ISAVIMSLPDLKTIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQTTGQL 622
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN 499
TDKKKVTLGTQPT L+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLN
Sbjct: 623 TDKKKVTLGTQPTTLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLN 682
Query: 500 AESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQ 559
A++YPDSLALA + GTIDEIQKLHIRTVPLGE PRRIAYQE+SQTF V T RID+
Sbjct: 683 AQAYPDSLALANKNAVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVH 742
Query: 560 EADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
G+ P+R SASTQAQN T SS KPG + AN A+ E++VHNLL+IDQ
Sbjct: 743 GRGGAKPLRNSASTQAQNITC---SSNFLPKPGGGNSTAAN--AEVGQEIDVHNLLVIDQ 797
Query: 620 NTFE 623
NTFE
Sbjct: 798 NTFE 801
Score = 365 bits (936), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/284 (60%), Positives = 223/284 (78%), Gaps = 1/284 (0%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++A+NN++EI VTPEGLRP+KEI + G IAVM+ FR P KDL+FI+T+R
Sbjct: 24 TSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTIAVMRHFRPPDSNKDLIFILTRR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YN MILE R D + ++TKA+GNVSD +G PSE G++A IDP+ARVIG+ LY GLF II
Sbjct: 84 YNVMILEARMVNDAITVVTKANGNVSDSVGIPSEGGVMAAIDPKARVIGMCLYQGLFTII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KD ELKA+++RM+EL + DV+FLHGC NPT+I IH+D +GRHVK+HEI+L+EKEF
Sbjct: 144 PLDKDASELKATNLRMDELTVYDVEFLHGCLNPTVIVIHKDNDGRHVKSHEINLREKEFM 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++IPVP P+GG I+IG+ESI+YH G +Y AVAP + STI CYA+
Sbjct: 204 KIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDGSNYHAVAPLTFRQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
V +NG RYLLG++ G+L+ML L E G +VK+ KVE LGE
Sbjct: 264 VSSNGLRYLLGNMDGQLYMLFLGTSETSKGV-TVKDIKVEQLGE 306
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/276 (55%), Positives = 196/276 (71%), Gaps = 13/276 (4%)
Query: 954 TFSVKEPKVELLGEHCKGPV----------VEMSSLSYIKPGSTKQSTANQPADFNMEVE 1003
TF+V ++++ G P+ + SS KPG + AN A+ E++
Sbjct: 731 TFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNFLPKPGGGNSTAAN--AEVGQEID 788
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGR 1063
VHNLL+IDQNTFE+LHAH E SL+S+K G+DPNTY+V+ T++V PEE EPK GR
Sbjct: 789 VHNLLVIDQNTFEVLHAHHFVSPETISSLMSAKLGDDPNTYYVVATSLVIPEEPEPKVGR 848
Query: 1064 IIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN 1123
IIIFHY + KL Q+AE ++ G CY++ EFNGK+LA I S VRL+EWTNEKELR+EC+ N
Sbjct: 849 IIIFHYHENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECNIQN 908
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I AL+LK KGDFILVGDLMRS+TLLQ+K MEG F EI+RD P WM ++EILDD+ FLG
Sbjct: 909 MIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLG 968
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
+E + NLF+CQKDSAAT+DE+R L E+ HL GD
Sbjct: 969 SETNGNLFVCQKDSAATTDEERQLLPELARFHL-GD 1003
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 60/81 (74%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++A+NN++EI VTPEGLRP+KEI + G IAVM+ FR P KDL+FI+T
Sbjct: 22 NFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTIAVMRHFRPPDSNKDLIFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+R ++ ++ A+ I VT
Sbjct: 82 RRYNVMILEARMVNDAITVVT 102
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKN-LDNTLVLSFVGHTRVLTLSGAE 59
+GSLRIIR GIGI+EHACIDLPGIKG+W+L +G ++ +NTLVL+FVGHTR+LTLSG E
Sbjct: 382 DGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGVDESPYENTLVLAFVGHTRILTLSGEE 441
Query: 60 WGFHLLRGFSS 70
+ GF+S
Sbjct: 442 VEETEIPGFAS 452
>gi|156389050|ref|XP_001634805.1| predicted protein [Nematostella vectensis]
gi|156221892|gb|EDO42742.1| predicted protein [Nematostella vectensis]
Length = 1157
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/555 (61%), Positives = 423/555 (76%), Gaps = 22/555 (3%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRL+MLLLE++E +DGT+ VK+ K+E+LGE SI CL YLDNGVVF+GS LG
Sbjct: 269 RYLLGDMNGRLYMLLLERQELIDGTYEVKDLKLEMLGETSIAHCLVYLDNGVVFIGSMLG 328
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL KL+ PD +G+YV VME+FTNL PI+DMVVVDLERQGQGQLVTCSG KEGSLRI
Sbjct: 329 DSQLAKLSTEPDADGSYVQVMETFTNLGPIVDMVVVDLERQGQGQLVTCSGAKKEGSLRI 388
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSI-GSPKNLDNTLVLSFVG---------HTRVLTLS 250
IRNGIGI EHA IDL GI GIWAL + + + D+TLVLSFVG H+RVL+LS
Sbjct: 389 IRNGIGIHEHATIDLAGIMGIWALKLRKTQQEYDDTLVLSFVGQSRRVLCTIHSRVLSLS 448
Query: 251 GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSIS 310
G EVEETE+ GF+ DQQT+Y GNV ++QVT ++ L++ E++ VS W+ P+ K+IS
Sbjct: 449 GEEVEETEIPGFSDDQQTYYSGNVTGAQLIQVTAASVRLVNCETRQLVSEWKHPSAKNIS 508
Query: 311 VVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQ 370
V SCN QV+ A G ++YY+E+ E++Q++ LEYEVACLDI+P T ++A
Sbjct: 509 VASCNTEQVVAAVGSELYYIEIMPGELRQISQVTLEYEVACLDITP-----TVEGKSRAD 563
Query: 371 LAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYF 430
+ AVGLWTDIS R+L LP L ++ + LGGEIIPRSIL T FEG YLL ALGDG++FYF
Sbjct: 564 MVAVGLWTDISVRVLQLPKLNQLHVQMLGGEIIPRSILKTAFEGIHYLLCALGDGTLFYF 623
Query: 431 SLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLR 490
++DP++G L + KKVTLGTQPT+L+TF+SLST NVFACSDRPTVIYSSNHKLVFSNVNL+
Sbjct: 624 TMDPSTGALAECKKVTLGTQPTMLRTFKSLSTVNVFACSDRPTVIYSSNHKLVFSNVNLK 683
Query: 491 QVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFG 550
+VN MC LN++ YPDSLALA D + T GTIDEIQKLHIRTVPLGE+PRRIAYQE++QTFG
Sbjct: 684 EVNFMCPLNSQGYPDSLALANDGSLTIGTIDEIQKLHIRTVPLGESPRRIAYQEATQTFG 743
Query: 551 VITTRIDIQE--ADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNME 608
VI+ RI+I E G+ P+ PSAST A N +SS + +S S F E
Sbjct: 744 VISVRIEISEPGTSGTVPLHPSASTTAHNVSSSVGTGVSGSASSSAPDGIT-----FGDE 798
Query: 609 VEVHNLLIIDQNTFE 623
+E+ +LLIIDQ+TFE
Sbjct: 799 MEIGSLLIIDQHTFE 813
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 172/287 (59%), Positives = 224/287 (78%), Gaps = 7/287 (2%)
Query: 688 DLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
DLNLV+AKN R+EIH VTPEGLRP+ ++ LYG + VM+ FR P + +DLLFI+T +Y
Sbjct: 28 DLNLVIAKNTRLEIHLVTPEGLRPMLDVGLYGSVGVMELFRPPNEPQDLLFILTAKYRVC 87
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
IL R + + I+T+A G+V DRIG+PS+ G I IIDP RVIGLRLY+GLFK+IPLE
Sbjct: 88 ILGYRKETGD--IVTRACGDVQDRIGRPSDTGQIGIIDPSCRVIGLRLYDGLFKVIPLEL 145
Query: 808 D-NFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTP 866
D + ELKA +IR+EEL + D+QFL+GC NPTI+ I+QD +GRHVKT+EI+L++ EF K P
Sbjct: 146 DSDKELKAFNIRLEELHVVDIQFLYGCANPTIVFIYQDPHGRHVKTYEINLRDHEFAKGP 205
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDA 926
WKQDN+E+EA VI VP PLGGA+IIGQESI YH G +Y A+AP +K S++ C+ K+D
Sbjct: 206 WKQDNVEVEACRVIAVPNPLGGALIIGQESITYHKGSNYHAIAPPALKQSSLTCHGKIDT 265
Query: 927 NGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE----HC 969
NG RYLLGD+ GRL+MLLLE++E +DGT+ VK+ K+E+LGE HC
Sbjct: 266 NGSRYLLGDMNGRLYMLLLERQELIDGTYEVKDLKLEMLGETSIAHC 312
Score = 310 bits (793), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 141/219 (64%), Positives = 177/219 (80%)
Query: 998 FNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEEN 1057
F E+E+ +LLIIDQ+TFE+ HAHQL E A SL+S +DP+TY+ +GTA V PEE
Sbjct: 795 FGDEMEIGSLLIIDQHTFEVTHAHQLHDNEQATSLMSCTLSDDPHTYYCVGTAYVFPEEP 854
Query: 1058 EPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRL 1117
EPK GR+++FH +GKL Q+AEKE+KGA YS+ EFNGK+LA INSTV +FEWT +KE R
Sbjct: 855 EPKAGRLLLFHLSEGKLVQVAEKEVKGAVYSLVEFNGKVLAGINSTVSIFEWTADKEFRY 914
Query: 1118 ECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILD 1177
ECS+++NI+AL+LK KGDFILVGDLMRS+TLL Y +EGSF+EI+ D++P WMT+IEILD
Sbjct: 915 ECSYYDNILALYLKTKGDFILVGDLMRSMTLLVYLPLEGSFQEIAHDFSPKWMTAIEILD 974
Query: 1178 DELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
D+ FLGAENSYNLF C KDS AT+DE+R HLQ+ G HL
Sbjct: 975 DDTFLGAENSYNLFTCTKDSGATTDEERYHLQDAGQYHL 1013
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 48/62 (77%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFT DLNLV+AKN R+EIH VTPEGLRP+ ++ LYG + VM+ FR P + +DLLFI+T
Sbjct: 22 NFTGPDDLNLVIAKNTRLEIHLVTPEGLRPMLDVGLYGSVGVMELFRPPNEPQDLLFILT 81
Query: 685 QR 686
+
Sbjct: 82 AK 83
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 53/79 (67%), Gaps = 10/79 (12%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSI-GSPKNLDNTLVLSFVG---------HT 50
EGSLRIIRNGIGI EHA IDL GI GIWAL + + + D+TLVLSFVG H+
Sbjct: 383 EGSLRIIRNGIGIHEHATIDLAGIMGIWALKLRKTQQEYDDTLVLSFVGQSRRVLCTIHS 442
Query: 51 RVLTLSGAEWGFHLLRGFS 69
RVL+LSG E + GFS
Sbjct: 443 RVLSLSGEEVEETEIPGFS 461
>gi|195329354|ref|XP_002031376.1| GM24084 [Drosophila sechellia]
gi|194120319|gb|EDW42362.1| GM24084 [Drosophila sechellia]
Length = 1140
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/545 (64%), Positives = 425/545 (77%), Gaps = 15/545 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLG++ G+L+ML L E G +VK+ KVE LGEISIPEC+TYLDNG +++G+R G
Sbjct: 270 RYLLGNMDGQLYMLFLGTAETSKGV-TVKDIKVEQLGEISIPECITYLDNGFLYIGARHG 328
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLV+LN S +G+YV +E+FTNLAPI+D+ VVDL+RQGQGQ++TCSG FK+GSLRI
Sbjct: 329 DSQLVRLN-SEAIDGSYVVPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRI 387
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIG-SPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
IR GIGI+EHACIDLPGIKG+W+L +G + +NTLVL+FVGHTR+LTLSG EVEETE+
Sbjct: 388 IRIGIGIQEHACIDLPGIKGMWSLKVGVDESSYENTLVLAFVGHTRILTLSGEEVEETEI 447
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF SD QTF C NVD ++QVT + L+S+ +KA V+ W P +SI VVSCN Q+
Sbjct: 448 PGFASDLQTFLCSNVDYDQLIQVTSDSVRLVSSATKALVAEWRPTGDRSIGVVSCNTTQI 507
Query: 320 LCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379
L A+ CD++Y+ + +++ + R L YEVACLDI+PL +ET K+ L AVGLWTD
Sbjct: 508 LVASACDIFYIVIEDGSLREQSRRTLAYEVACLDITPL--DETQK---KSDLVAVGLWTD 562
Query: 380 ISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRL 439
ISA +LSLP LE + E L GEIIPRSILMT FEG YLL ALGDGSM+YF +D +G+L
Sbjct: 563 ISAVILSLPDLETIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQTTGQL 622
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN 499
TDKKKVTLGTQPT L+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLN
Sbjct: 623 TDKKKVTLGTQPTTLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLN 682
Query: 500 AESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQ 559
A++YPDSLALA + GTIDEIQKLHIRTVPLGE PRRIAYQESSQTF V T RID+
Sbjct: 683 AQAYPDSLALANKNAVILGTIDEIQKLHIRTVPLGEGPRRIAYQESSQTFAVSTLRIDVH 742
Query: 560 EADGSTPVRPSASTQAQNTTSSTISSLSYI-KPGSTKQSTANQPADFNMEVEVHNLLIID 618
G+ P+R SASTQAQN T S+ +++ KPG + AN A+ E++VHNLL+ID
Sbjct: 743 GRGGAKPLRNSASTQAQNITCSS----NFLPKPGGGNSTAAN--AEVGQEIDVHNLLVID 796
Query: 619 QNTFE 623
QNTFE
Sbjct: 797 QNTFE 801
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/284 (60%), Positives = 223/284 (78%), Gaps = 1/284 (0%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++A+NN++EI VTPEGLRP+KEI + G IAVM+ FR P KDLLFI+T+R
Sbjct: 24 TSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTIAVMRHFRPPDSNKDLLFILTRR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YN MILE R D + ++TKA+GNVSD +G PSE G+IA IDP+ARVIG+ LY GLF II
Sbjct: 84 YNVMILEARMVNDVITVVTKANGNVSDSVGIPSEGGVIAAIDPKARVIGMCLYQGLFTII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
P++KD ELKA+++RM+EL + DV+FLHGC NPT+I IH+D +GRHVK+HEI+L++KEF
Sbjct: 144 PMDKDASELKATNLRMDELNVYDVEFLHGCLNPTVIVIHKDNDGRHVKSHEINLRDKEFM 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++IPVP P+GG I+IG+ESI+YH G +Y AVAP + STI CYA+
Sbjct: 204 KIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDGSNYHAVAPLTFRQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
V +NG RYLLG++ G+L+ML L E G +VK+ KVE LGE
Sbjct: 264 VSSNGLRYLLGNMDGQLYMLFLGTAETSKGV-TVKDIKVEQLGE 306
Score = 308 bits (790), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 153/276 (55%), Positives = 198/276 (71%), Gaps = 13/276 (4%)
Query: 954 TFSVKEPKVELLGEHCKGPV----------VEMSSLSYIKPGSTKQSTANQPADFNMEVE 1003
TF+V ++++ G P+ + SS KPG + AN A+ E++
Sbjct: 731 TFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNFLPKPGGGNSTAAN--AEVGQEID 788
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGR 1063
VHNLL+IDQNTFE+LHAHQ E SL+S++ G+DPNTY+V+ T++V PEE EPK GR
Sbjct: 789 VHNLLVIDQNTFEVLHAHQFVSPETISSLMSAQLGDDPNTYYVVATSLVIPEEPEPKVGR 848
Query: 1064 IIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN 1123
IIIFHY++ KL Q+AE ++ G CY++ EFNGK+LA I S VRL+EWTNEKELR+EC+ N
Sbjct: 849 IIIFHYNENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECNIQN 908
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I AL+LK KGDFILVGDLMRS+TLLQ+K MEG F EI+RD P WM ++EILDD+ FLG
Sbjct: 909 MIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLG 968
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
+E + NLF+CQKDSAAT+DE+R L E+ HL GD
Sbjct: 969 SETNGNLFVCQKDSAATTDEERQLLPELARFHL-GD 1003
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 57/71 (80%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++A+NN++EI VTPEGLRP+KEI + G IAVM+ FR P KDLLFI+T
Sbjct: 22 NFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTIAVMRHFRPPDSNKDLLFILT 81
Query: 685 QRTDLNLVVAK 695
+R ++ ++ A+
Sbjct: 82 RRYNVMILEAR 92
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIG-SPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLRIIR GIGI+EHACIDLPGIKG+W+L +G + +NTLVL+FVGHTR+LTLSG E
Sbjct: 382 DGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGVDESSYENTLVLAFVGHTRILTLSGEE 441
Query: 60 WGFHLLRGFSS 70
+ GF+S
Sbjct: 442 VEETEIPGFAS 452
>gi|195571247|ref|XP_002103615.1| GD18880 [Drosophila simulans]
gi|194199542|gb|EDX13118.1| GD18880 [Drosophila simulans]
Length = 1140
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/545 (64%), Positives = 425/545 (77%), Gaps = 15/545 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLG++ G+L+ML L E G +VK+ KVE LGEISIPEC+TYLDNG +++G+R G
Sbjct: 270 RYLLGNMDGQLYMLFLGTAETSKGV-TVKDIKVEQLGEISIPECITYLDNGFLYIGARHG 328
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLV+LN S +G+YV +E+FTNLAPI+D+ VVDL+RQGQGQ++TCSG FK+GSLRI
Sbjct: 329 DSQLVRLN-SEAIDGSYVVPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRI 387
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKN-LDNTLVLSFVGHTRVLTLSGAEVEETEM 259
IR GIGI+EHACIDLPGIKG+W+L +G ++ +NTLVL+FVGHTR+LTLSG EVEETE+
Sbjct: 388 IRIGIGIQEHACIDLPGIKGMWSLKVGVDESPYENTLVLAFVGHTRILTLSGEEVEETEI 447
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF SD QTF C NVD ++QVT + L+S+ +KA V+ W P +SI VVSCN Q+
Sbjct: 448 PGFASDLQTFLCSNVDYDQLIQVTSDSVRLVSSATKALVAEWRPTGDRSIGVVSCNTTQI 507
Query: 320 LCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379
L A+ CD++Y+ + +++ R L YEVACLDI+PL +ET K+ L AVGLWTD
Sbjct: 508 LVASACDIFYIVIEDGNLREQCRRTLAYEVACLDITPL--DETQK---KSDLVAVGLWTD 562
Query: 380 ISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRL 439
ISA +LSLP LE + E L GEIIPRSILMT FEG YLL ALGDGSM+YF +D +G+L
Sbjct: 563 ISAVILSLPDLETIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQTTGQL 622
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN 499
TDKKKVTLGTQPT L+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLN
Sbjct: 623 TDKKKVTLGTQPTTLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLN 682
Query: 500 AESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQ 559
A++YPDSLALA + GTIDEIQKLHIRTVPLGE PRRIAYQESSQTF V T RID+
Sbjct: 683 AQAYPDSLALANKNAVILGTIDEIQKLHIRTVPLGEGPRRIAYQESSQTFAVSTLRIDVH 742
Query: 560 EADGSTPVRPSASTQAQNTTSSTISSLSYI-KPGSTKQSTANQPADFNMEVEVHNLLIID 618
G+ P+R SASTQAQN T S+ +++ KPG + AN A+ E++VHNLL+ID
Sbjct: 743 GRGGAKPLRNSASTQAQNITCSS----NFLPKPGGGNSTAAN--AEVGQEIDVHNLLVID 796
Query: 619 QNTFE 623
QNTFE
Sbjct: 797 QNTFE 801
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/284 (59%), Positives = 220/284 (77%), Gaps = 1/284 (0%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++A+NN++EI VTPEGLRP+KEI + G IAVM+ FR P KDLLFI+T+R
Sbjct: 24 TSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTIAVMRHFRPPDSNKDLLFILTRR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YN MILE R D + ++TKA+GNVSD +G S G+IA ID +ARVIG+ LY GLF II
Sbjct: 84 YNVMILEARMVNDVITVVTKANGNVSDSVGILSAGGVIAAIDLKARVIGMCLYQGLFTII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
P++KD ELKA+++RM+EL + DV+FLHGC NPT+I IH+D +GRHVK+HEI+L++KEF
Sbjct: 144 PMDKDASELKATNLRMDELNVYDVEFLHGCLNPTVIVIHKDNDGRHVKSHEINLRDKEFM 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++IPVP P+GG I+IG+ESI+YH G +Y AVAP + STI CYA+
Sbjct: 204 KIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDGSNYHAVAPLTFRQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
V +NG RYLLG++ G+L+ML L E G +VK+ KVE LGE
Sbjct: 264 VSSNGLRYLLGNMDGQLYMLFLGTAETSKGV-TVKDIKVEQLGE 306
Score = 310 bits (794), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/276 (55%), Positives = 198/276 (71%), Gaps = 13/276 (4%)
Query: 954 TFSVKEPKVELLGEHCKGPV----------VEMSSLSYIKPGSTKQSTANQPADFNMEVE 1003
TF+V ++++ G P+ + SS KPG + AN A+ E++
Sbjct: 731 TFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNFLPKPGGGNSTAAN--AEVGQEID 788
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGR 1063
VHNLL+IDQNTFE+LHAHQ E SL+S+K G+DPNTY+V+ T++V PEE EPK GR
Sbjct: 789 VHNLLVIDQNTFEVLHAHQFVSPETISSLMSAKLGDDPNTYYVVATSLVIPEEPEPKVGR 848
Query: 1064 IIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN 1123
IIIFHY++ KL Q+AE ++ G CY++ EFNGK+LA I S VRL+EWTNEKELR+EC+ N
Sbjct: 849 IIIFHYNENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECNIQN 908
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I AL+LK KGDFILVGDLMRS+TLLQ+K MEG F EI+RD P WM ++EILDD+ FLG
Sbjct: 909 MIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLG 968
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
+E + NLF+CQKDSAAT+DE+R L E+ HL GD
Sbjct: 969 SETNGNLFVCQKDSAATTDEERQLLPELARFHL-GD 1003
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 57/71 (80%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++A+NN++EI VTPEGLRP+KEI + G IAVM+ FR P KDLLFI+T
Sbjct: 22 NFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTIAVMRHFRPPDSNKDLLFILT 81
Query: 685 QRTDLNLVVAK 695
+R ++ ++ A+
Sbjct: 82 RRYNVMILEAR 92
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKN-LDNTLVLSFVGHTRVLTLSGAE 59
+GSLRIIR GIGI+EHACIDLPGIKG+W+L +G ++ +NTLVL+FVGHTR+LTLSG E
Sbjct: 382 DGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGVDESPYENTLVLAFVGHTRILTLSGEE 441
Query: 60 WGFHLLRGFSS 70
+ GF+S
Sbjct: 442 VEETEIPGFAS 452
>gi|21357503|ref|NP_650257.1| piccolo [Drosophila melanogaster]
gi|74872881|sp|Q9XYZ5.1|DDB1_DROME RecName: Full=DNA damage-binding protein 1; Short=D-DDB1; AltName:
Full=Damage-specific DNA-binding protein 1; AltName:
Full=Protein piccolo
gi|4928452|gb|AAD33592.1|AF132145_1 damage-specific DNA binding protein DDBa p127 subunit [Drosophila
melanogaster]
gi|7299719|gb|AAF54901.1| piccolo [Drosophila melanogaster]
gi|220942640|gb|ACL83863.1| DDB1-PA [synthetic construct]
Length = 1140
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/544 (64%), Positives = 423/544 (77%), Gaps = 13/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLG++ G+L+ML L E G +VK+ KVE LGEISIPEC+TYLDNG +++G+R G
Sbjct: 270 RYLLGNMDGQLYMLFLGTAETSKGV-TVKDIKVEQLGEISIPECITYLDNGFLYIGARHG 328
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLV+LN S +G+YV +E+FTNLAPI+D+ VVDL+RQGQGQ++TCSG FK+GSLRI
Sbjct: 329 DSQLVRLN-SEAIDGSYVVPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRI 387
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKN-LDNTLVLSFVGHTRVLTLSGAEVEETEM 259
IR GIGI+EHACIDLPGIKG+W+L +G ++ +NTLVL+FVGHTR+LTLSG EVEETE+
Sbjct: 388 IRIGIGIQEHACIDLPGIKGMWSLKVGVDESPYENTLVLAFVGHTRILTLSGEEVEETEI 447
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF SD QTF C NVD ++QVT + L+S+ +KA V+ W P ++I VVSCN Q+
Sbjct: 448 PGFASDLQTFLCSNVDYDQLIQVTSDSVRLVSSATKALVAEWRPTGDRTIGVVSCNTTQI 507
Query: 320 LCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379
L A+ CD++Y+ + +++ + R L YEVACLDI+PL +ET K+ L AVGLWTD
Sbjct: 508 LVASACDIFYIVIEDGSLREQSRRTLAYEVACLDITPL--DETQK---KSDLVAVGLWTD 562
Query: 380 ISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRL 439
ISA +LSLP LE + E L GEIIPRSILMT FEG YLL ALGDGSM+YF +D +G+L
Sbjct: 563 ISAVILSLPDLETIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQTTGQL 622
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN 499
TDKKKVTLGTQPT L+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLN
Sbjct: 623 TDKKKVTLGTQPTTLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLN 682
Query: 500 AESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQ 559
A++YPDSLALA + GTIDEIQKLHIRTVPLGE PRRIAYQESSQTF V T RID+
Sbjct: 683 AQAYPDSLALANKNAVILGTIDEIQKLHIRTVPLGEGPRRIAYQESSQTFAVSTLRIDVH 742
Query: 560 EADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
G+ P+R SASTQAQN T SS KPG + AN A+ E++VHNLL+IDQ
Sbjct: 743 GRGGAKPLRNSASTQAQNITC---SSNFLPKPGGGNSTAAN--AEVGQEIDVHNLLVIDQ 797
Query: 620 NTFE 623
NTFE
Sbjct: 798 NTFE 801
Score = 365 bits (937), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 172/284 (60%), Positives = 223/284 (78%), Gaps = 1/284 (0%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++A+NN++EI VTPEGLRP+KEI + G IAVM+ FR P KDLLFI+T+R
Sbjct: 24 TSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTIAVMRHFRPPDSNKDLLFILTRR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YN MILE R D + ++TKA+GNVSD +G PSE G+IA IDP+ARVIG+ LY GLF II
Sbjct: 84 YNVMILEARMVNDVITVVTKANGNVSDSVGIPSEGGVIAAIDPKARVIGMCLYQGLFTII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
P++KD ELKA+++RM+EL + DV+FLHGC NPT+I IH+D +GRHVK+HEI+L++KEF
Sbjct: 144 PMDKDASELKATNLRMDELNVYDVEFLHGCLNPTVIVIHKDSDGRHVKSHEINLRDKEFM 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++IPVP P+GG I+IG+ESI+YH G +Y AVAP + STI CYA+
Sbjct: 204 KIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDGSNYHAVAPLTFRQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
V +NG RYLLG++ G+L+ML L E G +VK+ KVE LGE
Sbjct: 264 VSSNGLRYLLGNMDGQLYMLFLGTAETSKGV-TVKDIKVEQLGE 306
Score = 311 bits (796), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/276 (56%), Positives = 197/276 (71%), Gaps = 13/276 (4%)
Query: 954 TFSVKEPKVELLGEHCKGPV----------VEMSSLSYIKPGSTKQSTANQPADFNMEVE 1003
TF+V ++++ G P+ + SS KPG + AN A+ E++
Sbjct: 731 TFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNFLPKPGGGNSTAAN--AEVGQEID 788
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGR 1063
VHNLL+IDQNTFE+LHAHQ E SL+S+K G+DPNTY+V+ T++V PEE EPK GR
Sbjct: 789 VHNLLVIDQNTFEVLHAHQFVAPETISSLMSAKLGDDPNTYYVVATSLVIPEEPEPKVGR 848
Query: 1064 IIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN 1123
IIIFHY + KL Q+AE ++ G CY++ EFNGK+LA I S VRL+EWTNEKELR+EC+ N
Sbjct: 849 IIIFHYHENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECNIQN 908
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I ALFLK KGDFILVGDLMRS+TLLQ+K MEG F EI+RD P WM ++EILDD+ FLG
Sbjct: 909 MIAALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLG 968
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
+E + NLF+CQKDSAAT+DE+R L E+ HL GD
Sbjct: 969 SETNGNLFVCQKDSAATTDEERQLLPELARFHL-GD 1003
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 57/71 (80%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++A+NN++EI VTPEGLRP+KEI + G IAVM+ FR P KDLLFI+T
Sbjct: 22 NFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTIAVMRHFRPPDSNKDLLFILT 81
Query: 685 QRTDLNLVVAK 695
+R ++ ++ A+
Sbjct: 82 RRYNVMILEAR 92
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKN-LDNTLVLSFVGHTRVLTLSGAE 59
+GSLRIIR GIGI+EHACIDLPGIKG+W+L +G ++ +NTLVL+FVGHTR+LTLSG E
Sbjct: 382 DGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGVDESPYENTLVLAFVGHTRILTLSGEE 441
Query: 60 WGFHLLRGFSS 70
+ GF+S
Sbjct: 442 VEETEIPGFAS 452
>gi|194901554|ref|XP_001980317.1| GG19434 [Drosophila erecta]
gi|190652020|gb|EDV49275.1| GG19434 [Drosophila erecta]
Length = 1140
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/544 (63%), Positives = 424/544 (77%), Gaps = 13/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLG++ G+L+ML L E G +VK+ KVE LGEISIPEC+TYLDNG +++G+R G
Sbjct: 270 RYLLGNMDGQLYMLFLGTAETSKGV-TVKDIKVEQLGEISIPECITYLDNGFLYIGARHG 328
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLV+LN S +G+YV +E+FTNLAPI+D+ VVDL+RQGQGQ++TCSG FK+GSLRI
Sbjct: 329 DSQLVRLN-SEAIDGSYVVPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRI 387
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKN-LDNTLVLSFVGHTRVLTLSGAEVEETEM 259
IR GIGI+EHACIDLPGIKG+W+L +G ++ +NTLVL+FVGHTR+LTLSG EVEETE+
Sbjct: 388 IRIGIGIQEHACIDLPGIKGMWSLKVGVDESPYENTLVLAFVGHTRILTLSGEEVEETEI 447
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF SD QTF C NVD ++QVT + L+S+ +KA V+ W P +SI VVSCN Q+
Sbjct: 448 PGFASDLQTFLCSNVDYDQLIQVTSDSVRLVSSATKALVAEWRPTGDRSIGVVSCNTTQI 507
Query: 320 LCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379
+ A+ CD++Y+ + +++ + R LEYEVACLDI+PL +ET K+ + AVGLWTD
Sbjct: 508 VVASACDLFYIVIEDGTLREQSRRTLEYEVACLDITPL--DETQK---KSDMVAVGLWTD 562
Query: 380 ISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRL 439
ISA ++SLP LE + E L GEIIPRSILMT FEG YLL ALGDGSM+YF +D +G+L
Sbjct: 563 ISAVIMSLPDLETIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQTTGQL 622
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN 499
TDKKKVTLGTQPT L+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLN
Sbjct: 623 TDKKKVTLGTQPTTLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLN 682
Query: 500 AESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQ 559
A++YPDSLALA + GTIDEIQKLHIRTVPLGE PRRIAYQE+SQTF V T RID+
Sbjct: 683 AQAYPDSLALANKNAVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVH 742
Query: 560 EADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
G+ P+R SASTQAQN T SS KPG + AN A+ E++VHNLL+IDQ
Sbjct: 743 GRGGAKPLRNSASTQAQNITC---SSNFLPKPGGGNSTAAN--AEVGQEIDVHNLLVIDQ 797
Query: 620 NTFE 623
NTFE
Sbjct: 798 NTFE 801
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 174/284 (61%), Positives = 223/284 (78%), Gaps = 1/284 (0%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++A+NN++EI VTPEGLRP+KEI + G IAVM+ FR P KDLLFI+T+R
Sbjct: 24 TSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTIAVMRHFRPPDSNKDLLFILTRR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YN MILE R D + ++TKA+GNVSD +G PSE G+IA IDP+ARVIG+ LY GLF II
Sbjct: 84 YNVMILEARMVNDAITVVTKANGNVSDSVGVPSEGGVIAAIDPKARVIGMCLYQGLFTII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KD ELKA+++RM+EL + DV+FLHGC NPT+I IH+D +GRHVK+HEI+L+EKEF
Sbjct: 144 PLDKDASELKATNLRMDELNVYDVEFLHGCMNPTVIVIHKDNDGRHVKSHEINLREKEFM 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++IPVP P+GG I+IG+ESI+YH G +Y AVAP + STI CYA+
Sbjct: 204 KIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDGSNYHAVAPLTFRQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
V +NG RYLLG++ G+L+ML L E G +VK+ KVE LGE
Sbjct: 264 VSSNGLRYLLGNMDGQLYMLFLGTAETSKGV-TVKDIKVEQLGE 306
Score = 309 bits (792), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 154/276 (55%), Positives = 197/276 (71%), Gaps = 13/276 (4%)
Query: 954 TFSVKEPKVELLGEHCKGPV----------VEMSSLSYIKPGSTKQSTANQPADFNMEVE 1003
TF+V ++++ G P+ + SS KPG + AN A+ E++
Sbjct: 731 TFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNFLPKPGGGNSTAAN--AEVGQEID 788
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGR 1063
VHNLL+IDQNTFE+LHAHQ E SL+S+K G+DPNTY+V+ T++V PEE EPK GR
Sbjct: 789 VHNLLVIDQNTFEVLHAHQFVSPETISSLMSAKLGDDPNTYYVVATSLVIPEEPEPKVGR 848
Query: 1064 IIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN 1123
IIIFHY + KL Q+AE ++ G CY++ EFNGK+LA I S VRL+EWTNEKELR+EC+ N
Sbjct: 849 IIIFHYHENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECNIQN 908
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I AL+LK KGDFILVGDLMRS+TLLQ+K MEG F EI+RD P WM ++EILDD+ FLG
Sbjct: 909 MIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLG 968
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
+E + NLF+CQKDSAAT+DE+R L E+ HL GD
Sbjct: 969 SETNGNLFVCQKDSAATTDEERQLLPELARFHL-GD 1003
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 60/81 (74%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++A+NN++EI VTPEGLRP+KEI + G IAVM+ FR P KDLLFI+T
Sbjct: 22 NFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTIAVMRHFRPPDSNKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+R ++ ++ A+ I VT
Sbjct: 82 RRYNVMILEARMVNDAITVVT 102
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKN-LDNTLVLSFVGHTRVLTLSGAE 59
+GSLRIIR GIGI+EHACIDLPGIKG+W+L +G ++ +NTLVL+FVGHTR+LTLSG E
Sbjct: 382 DGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGVDESPYENTLVLAFVGHTRILTLSGEE 441
Query: 60 WGFHLLRGFSS 70
+ GF+S
Sbjct: 442 VEETEIPGFAS 452
>gi|195449948|ref|XP_002072297.1| GK22405 [Drosophila willistoni]
gi|194168382|gb|EDW83283.1| GK22405 [Drosophila willistoni]
Length = 1140
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/544 (62%), Positives = 420/544 (77%), Gaps = 13/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLG++ G+L+ML L E G +VK+ KVE LGEISIPEC+TYLDNG +++G+R G
Sbjct: 270 RYLLGNMHGQLYMLFLGTSESSKG-ITVKDIKVEQLGEISIPECITYLDNGFLYIGARHG 328
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLV+L+ E G+YV +E+FTNLAPI+D+ VVDL+RQGQGQ++TCSG FK+GSLRI
Sbjct: 329 DSQLVRLSSEAIE-GSYVIPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRI 387
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKN-LDNTLVLSFVGHTRVLTLSGAEVEETEM 259
IR GIGI+EHACIDLPGIKG+W+L +G+ + +NTLVL+FVGHTR+LTLSG EVEETE+
Sbjct: 388 IRIGIGIQEHACIDLPGIKGMWSLKVGTDDSPYENTLVLAFVGHTRILTLSGEEVEETEI 447
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF SD QTF C NV+ ++QVT + L+ + SK+ V+ W P +SI VVSCN Q+
Sbjct: 448 PGFASDLQTFLCANVEHDQLIQVTSDSVRLVKSSSKSLVAEWRPEGDRSIGVVSCNGTQI 507
Query: 320 LCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379
+ A+ D++Y+ + +++ + L YEVACLDI+PL ++ SE L AVGLWTD
Sbjct: 508 VVASARDIFYIVIEDGNLQEKCRKTLAYEVACLDITPLDEKQNKSE-----LVAVGLWTD 562
Query: 380 ISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRL 439
ISA +LSLPSL+ + E L GEIIPRSILMT FEG YLL ALGDGSM+YF +DP +G+L
Sbjct: 563 ISAVMLSLPSLDTIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDPITGQL 622
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN 499
TDKKKVTLGTQPT L+TFRS +TTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLN
Sbjct: 623 TDKKKVTLGTQPTTLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLN 682
Query: 500 AESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQ 559
A++YPDSLALAT ++ GTIDEIQKLHIRTVPLGE PRRIAYQE+SQTF V T RID+
Sbjct: 683 AQAYPDSLALATKNSVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVH 742
Query: 560 EADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
G P+R SAST+AQN T SS KPG + AN A+ E++VHNLL+IDQ
Sbjct: 743 GRGGPKPLRSSASTRAQNITC---SSNILPKPGGGNSTAAN--AEVGQEIDVHNLLVIDQ 797
Query: 620 NTFE 623
NTFE
Sbjct: 798 NTFE 801
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/284 (61%), Positives = 223/284 (78%), Gaps = 1/284 (0%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++A+NN++EI VTPEGLRP+KEI + G IAVMK FR P KDLLFI+T+R
Sbjct: 24 TSPTDLNLIIARNNQVEIGIVTPEGLRPLKEININGTIAVMKHFRPPDSNKDLLFILTRR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YN MILE R D + ++TKA+GNVSD +G PSE G+IA IDP+ARVIG+ LY GLF II
Sbjct: 84 YNVMILEARMVGDTITVITKANGNVSDSVGIPSEGGVIAAIDPKARVIGMCLYQGLFTII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
P+EKD ELKA+++RM+EL + DV+FLHGC NPT+I IH+D +GRHVK+HEI+L++KEF
Sbjct: 144 PMEKDASELKATNLRMDELMVYDVEFLHGCLNPTVIVIHKDNDGRHVKSHEINLRDKEFM 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++IPVP P+GG I+IG+ESI+YH G +Y AVAP + STI CYA+
Sbjct: 204 KIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDGSNYHAVAPLTFRQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD+ G RYLLG++ G+L+ML L E G +VK+ KVE LGE
Sbjct: 264 VDSKGLRYLLGNMHGQLYMLFLGTSESSKG-ITVKDIKVEQLGE 306
Score = 308 bits (790), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/276 (55%), Positives = 197/276 (71%), Gaps = 13/276 (4%)
Query: 954 TFSVKEPKVELLGEHCKGPV----------VEMSSLSYIKPGSTKQSTANQPADFNMEVE 1003
TF+V ++++ G P+ + SS KPG + AN A+ E++
Sbjct: 731 TFAVSTLRIDVHGRGGPKPLRSSASTRAQNITCSSNILPKPGGGNSTAAN--AEVGQEID 788
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGR 1063
VHNLL+IDQNTFE+LHAHQ E +L+S+K G+DPNTY+V+ T++V P+E EPK GR
Sbjct: 789 VHNLLVIDQNTFEVLHAHQFVSPETISALMSAKLGDDPNTYYVVATSLVIPDEPEPKVGR 848
Query: 1064 IIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN 1123
IIIFHY D KL Q+AE ++ G CY++ EFNGK+LA I S VRL+EWTNEKELR+EC+ N
Sbjct: 849 IIIFHYHDNKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECNIQN 908
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I AL+LK KGDFILVGDLMRS+TLLQ+K MEG F EI+RD P WM ++EILDD+ FLG
Sbjct: 909 MIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLG 968
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
+E + NLF+CQKDSAAT+DE+R L E+ HL GD
Sbjct: 969 SETNGNLFVCQKDSAATTDEERQLLPELARFHL-GD 1003
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 57/71 (80%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++A+NN++EI VTPEGLRP+KEI + G IAVMK FR P KDLLFI+T
Sbjct: 22 NFTSPTDLNLIIARNNQVEIGIVTPEGLRPLKEININGTIAVMKHFRPPDSNKDLLFILT 81
Query: 685 QRTDLNLVVAK 695
+R ++ ++ A+
Sbjct: 82 RRYNVMILEAR 92
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKN-LDNTLVLSFVGHTRVLTLSGAE 59
+GSLRIIR GIGI+EHACIDLPGIKG+W+L +G+ + +NTLVL+FVGHTR+LTLSG E
Sbjct: 382 DGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGTDDSPYENTLVLAFVGHTRILTLSGEE 441
Query: 60 WGFHLLRGFSS 70
+ GF+S
Sbjct: 442 VEETEIPGFAS 452
>gi|195395112|ref|XP_002056180.1| GJ10363 [Drosophila virilis]
gi|194142889|gb|EDW59292.1| GJ10363 [Drosophila virilis]
Length = 1140
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/544 (62%), Positives = 417/544 (76%), Gaps = 13/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLG++ G+L+ML L E GT +VK+ KVE LGEISIPEC+TYLDNG +++GSR G
Sbjct: 270 RYLLGNMDGQLYMLFLGTTETSKGT-TVKDIKVEQLGEISIPECITYLDNGFLYIGSRHG 328
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLV+L+ S +G+YV +E+FTNLAPI+D+ VVDL+RQGQGQ++TCSG FK+GSLRI
Sbjct: 329 DSQLVRLS-SEAIDGSYVIPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRI 387
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIG-SPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
IR GIGI+EHACIDLPGIKG+W+L +G +NTLVL+FVGHTR+LTLSG EVEETE+
Sbjct: 388 IRIGIGIQEHACIDLPGIKGMWSLKVGIDDSAYENTLVLAFVGHTRILTLSGEEVEETEI 447
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF SD QTF C NVD ++QVT + L+ + +K V W+P +SI VVSCN Q+
Sbjct: 448 PGFASDLQTFLCANVDYDQLIQVTAESVRLVKSATKTLVGEWKPEGDRSIGVVSCNSTQI 507
Query: 320 LCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379
+ A+ +++Y+ + + + + L YEVACLD++PL ++T SE L AVGLWTD
Sbjct: 508 VAASAREIFYISIEDGSLVEKCRKTLPYEVACLDVTPLDEKQTKSE-----LVAVGLWTD 562
Query: 380 ISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRL 439
ISA +L LP LE + E L GEIIPRSILMT FE YLL ALGDGSM+YF LD +G+L
Sbjct: 563 ISAVILRLPDLETIYTEKLSGEIIPRSILMTTFEDINYLLCALGDGSMYYFILDRTTGQL 622
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN 499
TDKKKVTLGTQPT L+TFRS STTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLN
Sbjct: 623 TDKKKVTLGTQPTTLRTFRSFSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLN 682
Query: 500 AESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQ 559
A++YPDSLALAT ++ GTIDEIQKLHIRTVPLGE PRRIAYQE+SQTF V T RID+
Sbjct: 683 AQAYPDSLALATKNSVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVH 742
Query: 560 EADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
G+ P+R SASTQAQN S+ SS KPG + AN A+ E++VHNLL+IDQ
Sbjct: 743 GRGGAKPLRNSASTQAQN---SSCSSNILPKPGGGNSTAAN--AEVGQEIDVHNLLVIDQ 797
Query: 620 NTFE 623
NTFE
Sbjct: 798 NTFE 801
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/284 (60%), Positives = 222/284 (78%), Gaps = 1/284 (0%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++A+NN++EI VTPEGLRP+KEI + GKI VM+ FR P KDLLFI+T+R
Sbjct: 24 TSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGKITVMRHFRPPDSNKDLLFILTRR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
+N MILE R D + ++TKA+GNVSD +G SE G IA IDP+ARVIG+ LY GLF II
Sbjct: 84 FNVMILEARMVGDAVTVVTKANGNVSDSVGILSEGGFIAAIDPKARVIGMCLYQGLFTII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KD ELKA+++RM+EL + DV+FLHGCQNPT+I IH+D +GRHVK+HEI+L++KEF
Sbjct: 144 PLDKDASELKATNLRMDELTVYDVEFLHGCQNPTVIVIHKDNDGRHVKSHEINLRDKEFI 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++IPVP +GG I+IG+ESI+YH G +Y AVAP + STI CYA+
Sbjct: 204 KVAWKQDNVETEATMLIPVPSSIGGVIVIGRESIVYHDGSNYHAVAPLTFRQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD+ G RYLLG++ G+L+ML L E GT +VK+ KVE LGE
Sbjct: 264 VDSKGLRYLLGNMDGQLYMLFLGTTETSKGT-TVKDIKVEQLGE 306
Score = 311 bits (797), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/237 (62%), Positives = 183/237 (77%), Gaps = 3/237 (1%)
Query: 983 KPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPN 1042
KPG + AN A+ E++VHNLL+IDQNTFE+LH+HQ P E SL+S+K G+DPN
Sbjct: 770 KPGGGNSTAAN--AEVGQEIDVHNLLVIDQNTFEVLHSHQFVPPETISSLMSAKLGDDPN 827
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINS 1102
TY+V+ T++V P+E EPK GRIIIFHY++ KL Q+AE ++ G CY++ EFNGK+LA I S
Sbjct: 828 TYYVVATSLVFPDEPEPKVGRIIIFHYNENKLTQVAETKVDGTCYALVEFNGKVLAGIGS 887
Query: 1103 TVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEIS 1162
VRL+EWTNEKELR+EC+ N I ALFLK KGDFILVGDLMRS+TLLQ+K MEG F EI+
Sbjct: 888 FVRLYEWTNEKELRMECNIQNMIAALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIA 947
Query: 1163 RDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
RD P WM ++EILDD+ FLG E NLF+CQKDSAAT+DE+R L E+ HL GD
Sbjct: 948 RDCEPKWMRAVEILDDDTFLGCETHDNLFVCQKDSAATTDEERQLLPELARFHL-GD 1003
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 57/71 (80%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++A+NN++EI VTPEGLRP+KEI + GKI VM+ FR P KDLLFI+T
Sbjct: 22 NFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGKITVMRHFRPPDSNKDLLFILT 81
Query: 685 QRTDLNLVVAK 695
+R ++ ++ A+
Sbjct: 82 RRFNVMILEAR 92
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIG-SPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLRIIR GIGI+EHACIDLPGIKG+W+L +G +NTLVL+FVGHTR+LTLSG E
Sbjct: 382 DGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGIDDSAYENTLVLAFVGHTRILTLSGEE 441
Query: 60 WGFHLLRGFSS 70
+ GF+S
Sbjct: 442 VEETEIPGFAS 452
>gi|194741158|ref|XP_001953056.1| GF17579 [Drosophila ananassae]
gi|190626115|gb|EDV41639.1| GF17579 [Drosophila ananassae]
Length = 1140
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/546 (62%), Positives = 419/546 (76%), Gaps = 17/546 (3%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLG++ G+L+ML L E G +VK+ KVE LGEISIPEC+TYLDNG +++G+R G
Sbjct: 270 RYLLGNMDGQLYMLFLGTSETSKG-ITVKDIKVEQLGEISIPECITYLDNGFLYIGARHG 328
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLV+L+ S +G+YV +E+FTNLAPI+D+ VVDL+RQGQGQ++TCSG FK+GSLRI
Sbjct: 329 DSQLVRLS-SDAIDGSYVIPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRI 387
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIG---SPKNLDNTLVLSFVGHTRVLTLSGAEVEET 257
IR GIGI+EHACIDLPGIKG+W+L +G SP +NTLVL+FVGHTR+LTLSG EVEET
Sbjct: 388 IRIGIGIQEHACIDLPGIKGMWSLKVGIDDSP--YENTLVLAFVGHTRILTLSGEEVEET 445
Query: 258 EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKN 317
E+ GF SD QTF C NV+ ++QVT + L+ + +K V+ W P +SI VVSCN
Sbjct: 446 EIPGFASDLQTFLCANVEHDQIIQVTSDSVRLVKSATKDLVAEWRPEGDRSIGVVSCNST 505
Query: 318 QVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
Q++ A+ D++Y+ + ++ + + + L YEVACLDI+PL + K+ L AVGLW
Sbjct: 506 QIVVASARDIFYIVIEDGKLVEKSRKTLAYEVACLDITPLDESQN-----KSDLVAVGLW 560
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDISA +LSLP LE + E L GEIIPRSILMT FEG YLL ALGDGSM+YF +D +G
Sbjct: 561 TDISAVILSLPELETIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQTTG 620
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
+LTDKKKVTLGTQPT L+TFRS +TTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCS
Sbjct: 621 QLTDKKKVTLGTQPTTLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCS 680
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
LNA++YPDSLALAT ++ GTIDEIQKLHIRTVPLGE PRRIAYQE+SQTF V T RID
Sbjct: 681 LNAQAYPDSLALATKNSVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRID 740
Query: 558 IQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLII 617
+ G+ P+R SASTQAQN T SS KPG+ + N A+ E++VHNLL+I
Sbjct: 741 VHGRGGTKPLRNSASTQAQNI---TYSSNILPKPGTGTSTATN--AEVGQEIDVHNLLVI 795
Query: 618 DQNTFE 623
DQNTFE
Sbjct: 796 DQNTFE 801
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 172/284 (60%), Positives = 222/284 (78%), Gaps = 1/284 (0%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNLV+A+NN++EI VTPEGLRP+KEI + G IAVM+ FR P KDLLFI+T+R
Sbjct: 24 TSPTDLNLVIARNNQVEIDLVTPEGLRPLKEININGTIAVMRHFRPPDSNKDLLFILTRR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YN MILE R D + ++TKA+GNVSD +G PSE G+IA IDP+ARVIG+ LY GLF II
Sbjct: 84 YNVMILEARMVNDVITVVTKANGNVSDSVGIPSEGGVIAAIDPKARVIGMCLYQGLFTII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
P++K+ ELKA+++RM+EL + DV+FLHGC NPT+I IH+D +GRHVK+HEI+L+EKEF
Sbjct: 144 PMDKEASELKATNLRMDELNVYDVEFLHGCLNPTVIVIHKDNDGRHVKSHEINLREKEFM 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++I VP P+GG I+IG+ESI+YH G +Y AVAP + STI CYA+
Sbjct: 204 KIAWKQDNVETEATMLITVPSPIGGVIVIGRESIVYHDGSNYHAVAPLTFRQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD+ G RYLLG++ G+L+ML L E G +VK+ KVE LGE
Sbjct: 264 VDSKGFRYLLGNMDGQLYMLFLGTSETSKG-ITVKDIKVEQLGE 306
Score = 310 bits (794), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/276 (55%), Positives = 197/276 (71%), Gaps = 13/276 (4%)
Query: 954 TFSVKEPKVELLGEHCKGPV----------VEMSSLSYIKPGSTKQSTANQPADFNMEVE 1003
TF+V ++++ G P+ + SS KPG+ + N A+ E++
Sbjct: 731 TFAVSTLRIDVHGRGGTKPLRNSASTQAQNITYSSNILPKPGTGTSTATN--AEVGQEID 788
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGR 1063
VHNLL+IDQNTFE+LHAHQ E SL+S+K G+DPNTY+V+ T++V P+E EPK GR
Sbjct: 789 VHNLLVIDQNTFEVLHAHQFVAPETISSLMSAKLGDDPNTYYVVATSLVIPDEPEPKVGR 848
Query: 1064 IIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN 1123
IIIFHY D KL Q+AE ++ G CY++ EFNGK+LA I S VRL+EWTNEKELR+EC+ N
Sbjct: 849 IIIFHYHDNKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECNIQN 908
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I ALFLK KGDFILVGDLMRS+TLLQ+K MEG F EI+RD P WM ++EILDD+ FLG
Sbjct: 909 MIAALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLG 968
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
+E + NLF+CQKDSAAT+DE+R L E+ HL GD
Sbjct: 969 SETNGNLFVCQKDSAATTDEERQLLPELARFHL-GD 1003
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 57/71 (80%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNLV+A+NN++EI VTPEGLRP+KEI + G IAVM+ FR P KDLLFI+T
Sbjct: 22 NFTSPTDLNLVIARNNQVEIDLVTPEGLRPLKEININGTIAVMRHFRPPDSNKDLLFILT 81
Query: 685 QRTDLNLVVAK 695
+R ++ ++ A+
Sbjct: 82 RRYNVMILEAR 92
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 58/73 (79%), Gaps = 5/73 (6%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIG---SPKNLDNTLVLSFVGHTRVLTLSG 57
+GSLRIIR GIGI+EHACIDLPGIKG+W+L +G SP +NTLVL+FVGHTR+LTLSG
Sbjct: 382 DGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGIDDSP--YENTLVLAFVGHTRILTLSG 439
Query: 58 AEWGFHLLRGFSS 70
E + GF+S
Sbjct: 440 EEVEETEIPGFAS 452
>gi|195145844|ref|XP_002013900.1| GL24391 [Drosophila persimilis]
gi|194102843|gb|EDW24886.1| GL24391 [Drosophila persimilis]
Length = 1140
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/549 (62%), Positives = 421/549 (76%), Gaps = 13/549 (2%)
Query: 76 NGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFV 135
+G RYLLG++ G+L+ML L E G +VK+ KVE LGEISIPEC+TYLDNG +++
Sbjct: 265 DGKGLRYLLGNMDGQLYMLFLGTSETSKGV-TVKDIKVEKLGEISIPECITYLDNGFLYI 323
Query: 136 GSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKE 195
G+R GDSQLV+L+ E G+YV +E+FTNLAPI+D+ VVDL+RQGQGQ++TCSG FK+
Sbjct: 324 GARHGDSQLVRLSSESIE-GSYVIPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKD 382
Query: 196 GSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKN-LDNTLVLSFVGHTRVLTLSGAEV 254
GSLRIIR GIGI+EHACIDLPGIKG+W+L +G ++ +NTLVL+FVG TR+LTLSG EV
Sbjct: 383 GSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGIDESPYENTLVLAFVGLTRILTLSGEEV 442
Query: 255 EETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSC 314
EETE+ GF SD QTF C NV+ ++QVT + L+ + +KA + W P +SI VVSC
Sbjct: 443 EETEIPGFASDLQTFLCANVEHDQLIQVTSDSVRLVKSATKALICEWRPEGDRSIGVVSC 502
Query: 315 NKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAV 374
N Q++ A+ D++Y+ + + + + + L YEVACLDI+PL +ET + K+ L AV
Sbjct: 503 NSTQIVLASARDIFYIVIEDGRLVEKSRKTLAYEVACLDITPL--DETQN---KSDLIAV 557
Query: 375 GLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDP 434
GLWTDISA +LSLP LE + E L GEIIPRSILMT FEG YLL ALGDGSM+YF +D
Sbjct: 558 GLWTDISAVILSLPDLETIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQ 617
Query: 435 ASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNH 494
+G+LTDKKKVTLGTQPT L+TFRS +TTNVFACSDRPTVIYSSNHKLVFSNVNL++VNH
Sbjct: 618 TTGQLTDKKKVTLGTQPTTLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNH 677
Query: 495 MCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
MCSLNA++YPDSLALAT ++ GTIDEIQKLHIRTVPLGE PRRIAYQE+SQTF V T
Sbjct: 678 MCSLNAQAYPDSLALATKNSVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTL 737
Query: 555 RIDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNL 614
RID+ G+ P+R SASTQAQN T SS KPG + AN A+ E++VHNL
Sbjct: 738 RIDVHGRGGAKPLRNSASTQAQNITC---SSNILPKPGGNNSTAAN--AEVGQEIDVHNL 792
Query: 615 LIIDQNTFE 623
L+IDQNTFE
Sbjct: 793 LVIDQNTFE 801
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 172/284 (60%), Positives = 222/284 (78%), Gaps = 1/284 (0%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++A+NN++EI VTPEGLRP+KEI + G +AVM+ FR P KDLLFI+T+R
Sbjct: 24 TSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTVAVMRHFRPPDSNKDLLFILTRR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YN MILE R D++ ++TKA+GNVSD G PSE G+IA IDP+ARVIG+ LY GLF II
Sbjct: 84 YNVMILEARMVNDSITVITKANGNVSDSAGIPSEGGVIAAIDPKARVIGMVLYQGLFTII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
P++K+ ELKA+++RM+EL + DV+FLHGC NPTII IH+D +GRHVK+HEI+L+EKEF
Sbjct: 144 PMDKEASELKATNLRMDELNVYDVEFLHGCLNPTIIVIHKDNDGRHVKSHEINLREKEFM 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++IPVP P+GG I+IG+ESI+YH G +Y AVAP + STI CYA+
Sbjct: 204 KIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDGSNYHAVAPLTFRQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD G RYLLG++ G+L+ML L E G +VK+ KVE LGE
Sbjct: 264 VDGKGLRYLLGNMDGQLYMLFLGTSETSKGV-TVKDIKVEKLGE 306
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/276 (55%), Positives = 197/276 (71%), Gaps = 13/276 (4%)
Query: 954 TFSVKEPKVELLGEHCKGPV----------VEMSSLSYIKPGSTKQSTANQPADFNMEVE 1003
TF+V ++++ G P+ + SS KPG + AN A+ E++
Sbjct: 731 TFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNILPKPGGNNSTAAN--AEVGQEID 788
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGR 1063
VHNLL+IDQNTFE+LHAHQ E SL+S+K G+DPNTY+V+ T++V P+E EPK GR
Sbjct: 789 VHNLLVIDQNTFEVLHAHQFVAPETISSLMSAKLGDDPNTYYVVATSLVIPDEPEPKVGR 848
Query: 1064 IIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN 1123
IIIFHY D KL Q+AE ++ G CY++ EFNGK+LA I S VRL+EWTNEKELR+EC+ N
Sbjct: 849 IIIFHYHDSKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECNIQN 908
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I AL+LK KGDFILVGDLMRS+TLLQ+K MEG F EI+RD P WM ++EILDD+ FLG
Sbjct: 909 MIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLG 968
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
+E + NLF+CQKDSAAT+DE+R L E+ HL GD
Sbjct: 969 SETNGNLFVCQKDSAATTDEERQLLPELARFHL-GD 1003
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++A+NN++EI VTPEGLRP+KEI + G +AVM+ FR P KDLLFI+T
Sbjct: 22 NFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTVAVMRHFRPPDSNKDLLFILT 81
Query: 685 QRTDLNLVVAK--NNRIEIHT 703
+R ++ ++ A+ N+ I + T
Sbjct: 82 RRYNVMILEARMVNDSITVIT 102
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKN-LDNTLVLSFVGHTRVLTLSGAE 59
+GSLRIIR GIGI+EHACIDLPGIKG+W+L +G ++ +NTLVL+FVG TR+LTLSG E
Sbjct: 382 DGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGIDESPYENTLVLAFVGLTRILTLSGEE 441
Query: 60 WGFHLLRGFSS 70
+ GF+S
Sbjct: 442 VEETEIPGFAS 452
>gi|125774475|ref|XP_001358496.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
gi|54638233|gb|EAL27635.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
Length = 1140
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/549 (62%), Positives = 421/549 (76%), Gaps = 13/549 (2%)
Query: 76 NGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFV 135
+G RYLLG++ G+L+ML L E G +VK+ KVE LGEISIPEC+TYLDNG +++
Sbjct: 265 DGKGLRYLLGNMDGQLYMLFLGTSETSKGV-TVKDIKVEKLGEISIPECITYLDNGFLYI 323
Query: 136 GSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKE 195
G+R GDSQLV+L+ E G+YV +E+FTNLAPI+D+ VVDL+RQGQGQ++TCSG FK+
Sbjct: 324 GARHGDSQLVRLSSESIE-GSYVIPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKD 382
Query: 196 GSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKN-LDNTLVLSFVGHTRVLTLSGAEV 254
GSLRIIR GIGI+EHACIDLPGIKG+W+L +G ++ +NTLVL+FVG TR+LTLSG EV
Sbjct: 383 GSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGIDESPYENTLVLAFVGLTRILTLSGEEV 442
Query: 255 EETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSC 314
EETE+ GF SD QTF C NV+ ++QVT + L+ + +KA + W P +SI VVSC
Sbjct: 443 EETEIPGFASDLQTFLCANVEHDQLIQVTSDSVRLVKSATKALICEWRPEGDRSIGVVSC 502
Query: 315 NKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAV 374
N Q++ A+ D++Y+ + + + + + L YEVACLDI+PL +ET + K+ L AV
Sbjct: 503 NSTQIVLASARDIFYIVIEDGRLVEKSRKTLAYEVACLDITPL--DETQN---KSDLIAV 557
Query: 375 GLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDP 434
GLWTDISA +LSLP LE + E L GEIIPRSILMT FEG YLL ALGDGSM+YF +D
Sbjct: 558 GLWTDISAVILSLPDLETIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQ 617
Query: 435 ASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNH 494
+G+LTDKKKVTLGTQPT L+TFRS +TTNVFACSDRPTVIYSSNHKLVFSNVNL++VNH
Sbjct: 618 TTGQLTDKKKVTLGTQPTTLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNH 677
Query: 495 MCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
MCSLNA++YPDSLALAT ++ GTIDEIQKLHIRTVPLGE PRRIAYQE+SQTF V T
Sbjct: 678 MCSLNAQAYPDSLALATKNSVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTL 737
Query: 555 RIDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNL 614
RID+ G+ P+R SASTQAQN T SS KPG + AN A+ E++VHNL
Sbjct: 738 RIDVHGRGGAKPLRNSASTQAQNITC---SSNILPKPGGNNSTAAN--AEVGQEIDVHNL 792
Query: 615 LIIDQNTFE 623
L+IDQNTFE
Sbjct: 793 LVIDQNTFE 801
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 172/284 (60%), Positives = 222/284 (78%), Gaps = 1/284 (0%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++A+NN++EI VTPEGLRP+KEI + G +AVM+ FR P KDLLFI+T+R
Sbjct: 24 TSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTVAVMRHFRPPDSNKDLLFILTRR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YN MILE R D++ ++TKA+GNVSD G PSE G+IA IDP+ARVIG+ LY GLF II
Sbjct: 84 YNVMILEARMVNDSITVITKANGNVSDSAGIPSEGGVIAAIDPKARVIGMVLYQGLFTII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
P++K+ ELKA+++RM+EL + DV+FLHGC NPTII IH+D +GRHVK+HEI+L+EKEF
Sbjct: 144 PMDKEASELKATNLRMDELSVYDVEFLHGCLNPTIIVIHKDNDGRHVKSHEINLREKEFM 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++IPVP P+GG I+IG+ESI+YH G +Y AVAP + STI CYA+
Sbjct: 204 KIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDGSNYHAVAPLTFRQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD G RYLLG++ G+L+ML L E G +VK+ KVE LGE
Sbjct: 264 VDGKGLRYLLGNMDGQLYMLFLGTSETSKGV-TVKDIKVEKLGE 306
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/276 (55%), Positives = 197/276 (71%), Gaps = 13/276 (4%)
Query: 954 TFSVKEPKVELLGEHCKGPV----------VEMSSLSYIKPGSTKQSTANQPADFNMEVE 1003
TF+V ++++ G P+ + SS KPG + AN A+ E++
Sbjct: 731 TFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNILPKPGGNNSTAAN--AEVGQEID 788
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGR 1063
VHNLL+IDQNTFE+LHAHQ E SL+S+K G+DPNTY+V+ T++V P+E EPK GR
Sbjct: 789 VHNLLVIDQNTFEVLHAHQFVAPETISSLMSAKLGDDPNTYYVVATSLVIPDEPEPKVGR 848
Query: 1064 IIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN 1123
IIIFHY D KL Q+AE ++ G CY++ EFNGK+LA I S VRL+EWTNEKELR+EC+ N
Sbjct: 849 IIIFHYHDNKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECNIQN 908
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I AL+LK KGDFILVGDLMRS+TLLQ+K MEG F EI+RD P WM ++EILDD+ FLG
Sbjct: 909 MIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLG 968
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
+E + NLF+CQKDSAAT+DE+R L E+ HL GD
Sbjct: 969 SETNGNLFVCQKDSAATTDEERQLLPELARFHL-GD 1003
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++A+NN++EI VTPEGLRP+KEI + G +AVM+ FR P KDLLFI+T
Sbjct: 22 NFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTVAVMRHFRPPDSNKDLLFILT 81
Query: 685 QRTDLNLVVAK--NNRIEIHT 703
+R ++ ++ A+ N+ I + T
Sbjct: 82 RRYNVMILEARMVNDSITVIT 102
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKN-LDNTLVLSFVGHTRVLTLSGAE 59
+GSLRIIR GIGI+EHACIDLPGIKG+W+L +G ++ +NTLVL+FVG TR+LTLSG E
Sbjct: 382 DGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGIDESPYENTLVLAFVGLTRILTLSGEE 441
Query: 60 WGFHLLRGFSS 70
+ GF+S
Sbjct: 442 VEETEIPGFAS 452
>gi|195108657|ref|XP_001998909.1| GI23368 [Drosophila mojavensis]
gi|193915503|gb|EDW14370.1| GI23368 [Drosophila mojavensis]
Length = 1140
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/544 (62%), Positives = 416/544 (76%), Gaps = 13/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLG++ G+L+ML L E +VK+ KVE LGEISIPEC+TYLDNG +++GSR G
Sbjct: 270 RYLLGNMDGQLYMLFLGINET-GKVPTVKDIKVEQLGEISIPECITYLDNGFLYIGSRHG 328
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLV+L+ P + G+YV +E+FTNLAPI+D+ VVDL+RQGQGQ++TCSG FK+GSLRI
Sbjct: 329 DSQLVRLSSEPID-GSYVIPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRI 387
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNL-DNTLVLSFVGHTRVLTLSGAEVEETEM 259
IR GIGI+EHACIDLPGIKG+W+L +G ++ +NTLVL+FVGHTR+LTLSG EVEETE+
Sbjct: 388 IRIGIGIQEHACIDLPGIKGMWSLKVGIDDSVYENTLVLAFVGHTRILTLSGEEVEETEI 447
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF SD Q+F C NV+ ++QVT + L+ + +KA V W+P +SI VVSCN Q+
Sbjct: 448 PGFASDLQSFLCANVEYDQLIQVTAESVRLVKSSTKALVGEWKPEGDRSIGVVSCNSTQI 507
Query: 320 LCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379
+ A+ +++Y+ + + + + L YEVACLD++PL ++ SE L AVGLWTD
Sbjct: 508 VAASAREIFYIAIEDGSLVEKCRKTLAYEVACLDVTPLDEKQNKSE-----LVAVGLWTD 562
Query: 380 ISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRL 439
ISA +LSLP LE + E L GEIIPRSILMT FE YLL ALGDGSM+YF LD +G L
Sbjct: 563 ISAVILSLPDLETIYTEKLSGEIIPRSILMTTFEDIHYLLCALGDGSMYYFILDRTTGFL 622
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN 499
TDKKKVTLGTQPT L+TFRS +TTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLN
Sbjct: 623 TDKKKVTLGTQPTTLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLN 682
Query: 500 AESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQ 559
A++YPDSLALAT ++ GTIDEIQKLHIRTVPLGE PRRIAYQE+SQTF V T RID+
Sbjct: 683 AQAYPDSLALATKNSVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVH 742
Query: 560 EADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
G+ P+R SASTQAQN T SS KPG + AN A+ E++VHNLLIIDQ
Sbjct: 743 GRGGAKPLRNSASTQAQNITC---SSNMLPKPGGGNSTAAN--AEVGQEIDVHNLLIIDQ 797
Query: 620 NTFE 623
NTFE
Sbjct: 798 NTFE 801
Score = 356 bits (913), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 172/284 (60%), Positives = 220/284 (77%), Gaps = 1/284 (0%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL++A+NN++EI VTPEGLRP+KEI + GKI VM+ FR P KDLLFI+T+R
Sbjct: 24 TSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGKITVMRHFRPPDSNKDLLFILTRR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
+N MILE R DN+ ++TKA+GNVSD +G SE G IA IDP+ARVIG+ LY GLF II
Sbjct: 84 FNVMILEARMVGDNITVVTKANGNVSDSVGILSEGGFIAAIDPKARVIGMCLYQGLFTII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KD ELKA+S+RM+EL + DV+FLHGC NPT+I IH+D +GRHVK HEI+L++KEF
Sbjct: 144 PLDKDASELKATSLRMDELIVYDVEFLHGCLNPTVIVIHKDNDGRHVKCHEINLRDKEFM 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++IPVP P+GG I+IG+ESI+YH G +Y AVAP + STI CYA+
Sbjct: 204 KLAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDGSNYHAVAPLTFRQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD+ G RYLLG++ G+L+ML L E +VK+ KVE LGE
Sbjct: 264 VDSKGLRYLLGNMDGQLYMLFLGINET-GKVPTVKDIKVEQLGE 306
Score = 311 bits (798), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/276 (56%), Positives = 196/276 (71%), Gaps = 13/276 (4%)
Query: 954 TFSVKEPKVELLGEHCKGPV----------VEMSSLSYIKPGSTKQSTANQPADFNMEVE 1003
TF+V ++++ G P+ + SS KPG + AN A+ E++
Sbjct: 731 TFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNMLPKPGGGNSTAAN--AEVGQEID 788
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGR 1063
VHNLLIIDQNTFE+LHAHQ P E +L+S+K G+DPNTY+V+ T++V P+E EPK GR
Sbjct: 789 VHNLLIIDQNTFEVLHAHQFVPPETISALMSAKLGDDPNTYYVVATSLVFPDEPEPKVGR 848
Query: 1064 IIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN 1123
IIIFHY + KL Q+AE ++ G CY++ EFNGK+LA I S VRL+EWTNEKELR+EC+ N
Sbjct: 849 IIIFHYHENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECNIQN 908
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I ALFLK KGDFILVGDLMRS+TLLQ+K MEG F EI+RD P WM ++EILDD+ FLG
Sbjct: 909 MIAALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLG 968
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
E NLF+CQKDSAAT+DE+R L E+ HL GD
Sbjct: 969 CETHDNLFVCQKDSAATTDEERQLLPELARFHL-GD 1003
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 57/71 (80%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL++A+NN++EI VTPEGLRP+KEI + GKI VM+ FR P KDLLFI+T
Sbjct: 22 NFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGKITVMRHFRPPDSNKDLLFILT 81
Query: 685 QRTDLNLVVAK 695
+R ++ ++ A+
Sbjct: 82 RRFNVMILEAR 92
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNL-DNTLVLSFVGHTRVLTLSGAE 59
+GSLRIIR GIGI+EHACIDLPGIKG+W+L +G ++ +NTLVL+FVGHTR+LTLSG E
Sbjct: 382 DGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGIDDSVYENTLVLAFVGHTRILTLSGEE 441
Query: 60 WGFHLLRGFSS 70
+ GF+S
Sbjct: 442 VEETEIPGFAS 452
>gi|195037449|ref|XP_001990173.1| GH18378 [Drosophila grimshawi]
gi|193894369|gb|EDV93235.1| GH18378 [Drosophila grimshawi]
Length = 1140
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/544 (61%), Positives = 416/544 (76%), Gaps = 13/544 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLG++ G+L+ML L E G +VK+ KVE LGEISIPEC+TYLDNG +++GSR G
Sbjct: 270 RYLLGNMDGQLYMLFLGTTETSKG-ITVKDIKVEQLGEISIPECITYLDNGFLYIGSRHG 328
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLV+L+ S +GT+V +E+FTNLAPI+D+ VVDL+RQGQGQ++TCSG FK+GSLRI
Sbjct: 329 DSQLVRLS-SEAIDGTFVIPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRI 387
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIG-SPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
IR GIGI+EHACIDLPGIKG+W+L +G + +NTLVL+FVGHTR+LTLSG EVEET++
Sbjct: 388 IRIGIGIQEHACIDLPGIKGMWSLKVGIDESSYENTLVLAFVGHTRILTLSGEEVEETDI 447
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF SD Q+F C NVD ++QVT + L+ + +KA V W+P +SI VVSCN Q+
Sbjct: 448 PGFASDLQSFLCANVDYDQLIQVTAESVRLVKSATKALVGEWKPEGDRSIGVVSCNTTQI 507
Query: 320 LCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379
+ A+ +++Y+ + + + + L YEVACLD++PL ++ K+ L AVGLWTD
Sbjct: 508 VAASAREIFYISIEDGSLVEKCRKILPYEVACLDVTPLDEKQN-----KSDLVAVGLWTD 562
Query: 380 ISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRL 439
ISA +LSLP LE + E L GEIIPRSILMT FE YLL ALGDGSM+YF LD +G+L
Sbjct: 563 ISAVILSLPDLETIYTEKLSGEIIPRSILMTTFEDIHYLLCALGDGSMYYFILDKTTGQL 622
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN 499
T+KKKVTLGTQPT L+TFRS +TTNVFACSDRPTVIYSSNHKLVFSNVNL++VNHMCSLN
Sbjct: 623 TEKKKVTLGTQPTTLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLN 682
Query: 500 AESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQ 559
A++YPDSLALAT ++ GTIDEIQKLHIRTVPLGE PRRIAYQE+SQTF V T RID+
Sbjct: 683 AQAYPDSLALATKNSVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVH 742
Query: 560 EADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
G+ P+R SASTQAQN T S KPG + AN A+ E++VHNLLIIDQ
Sbjct: 743 GRGGAKPLRNSASTQAQNITC---GSNILPKPGGGNSTAAN--AEVGQEIDVHNLLIIDQ 797
Query: 620 NTFE 623
NTFE
Sbjct: 798 NTFE 801
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/284 (60%), Positives = 220/284 (77%), Gaps = 1/284 (0%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNLV+A+NN+IEI VTPEGLRP+KEI + GKI VM+ FR P KKDLLFI+T+R
Sbjct: 24 TSETDLNLVIARNNQIEIDLVTPEGLRPLKEININGKITVMRHFRPPDTKKDLLFILTRR 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
+N MILE R D + ++TKA+GNVSD +G SE G IA IDP+ARVIG+ LY GLF II
Sbjct: 84 FNVMILEARMVGDTITVVTKANGNVSDSVGILSEGGFIAAIDPKARVIGMCLYQGLFTII 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL+KD ELKA+++RM+EL + DV+FLHGC NPT+I IH+D +GRHVK+HEI+L++KEF
Sbjct: 144 PLDKDASELKATNLRMDELTVYDVEFLHGCLNPTVIVIHRDNDGRHVKSHEINLRDKEFM 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
K WKQDN+E EA+++IPVP P+ G I+IG+ESI+YH G +Y AVAP + STI CYA+
Sbjct: 204 KIAWKQDNVETEATMLIPVPSPICGVIVIGRESIVYHDGSNYHAVAPLTFRQSTINCYAR 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+D G RYLLG++ G+L+ML L E G +VK+ KVE LGE
Sbjct: 264 IDEKGLRYLLGNMDGQLYMLFLGTTETSKG-ITVKDIKVEQLGE 306
Score = 316 bits (809), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 150/237 (63%), Positives = 184/237 (77%), Gaps = 3/237 (1%)
Query: 983 KPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPN 1042
KPG + AN A+ E++VHNLLIIDQNTFE+LHAHQ P E +L+S+K G+DPN
Sbjct: 770 KPGGGNSTAAN--AEVGQEIDVHNLLIIDQNTFEVLHAHQFVPPETISTLMSAKLGDDPN 827
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINS 1102
TY+V+ T++V+PEE EPK GRIIIFHY+D KL Q+AE ++ G CY++ EFNGK+LA I S
Sbjct: 828 TYYVVATSLVYPEEPEPKVGRIIIFHYNDNKLTQVAETKVDGTCYALVEFNGKVLAGIGS 887
Query: 1103 TVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEIS 1162
VRL+EWTNEKELR+EC+ N I ALFLK KGDFILVGDLMRS+TLLQ+K MEG F EI+
Sbjct: 888 FVRLYEWTNEKELRMECNIQNMIAALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIA 947
Query: 1163 RDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
RD P WM ++EILDD+ FLG E NLF+CQKDSAAT+DE+R L E+ HL GD
Sbjct: 948 RDCEPKWMRAVEILDDDTFLGCETHDNLFVCQKDSAATTDEERQLLPELARFHL-GD 1003
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 58/71 (81%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNLV+A+NN+IEI VTPEGLRP+KEI + GKI VM+ FR P KKDLLFI+T
Sbjct: 22 NFTSETDLNLVIARNNQIEIDLVTPEGLRPLKEININGKITVMRHFRPPDTKKDLLFILT 81
Query: 685 QRTDLNLVVAK 695
+R ++ ++ A+
Sbjct: 82 RRFNVMILEAR 92
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIG-SPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLRIIR GIGI+EHACIDLPGIKG+W+L +G + +NTLVL+FVGHTR+LTLSG E
Sbjct: 382 DGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGIDESSYENTLVLAFVGHTRILTLSGEE 441
Query: 60 WGFHLLRGFSS 70
+ GF+S
Sbjct: 442 VEETDIPGFAS 452
>gi|357623954|gb|EHJ74904.1| putative DNA repair protein xp-e [Danaus plexippus]
Length = 1128
Score = 623 bits (1607), Expect = e-175, Method: Compositional matrix adjust.
Identities = 328/545 (60%), Positives = 395/545 (72%), Gaps = 27/545 (4%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+AGRLFMLLLE E+ DGT SV++ KVELLG+I IPEC+TYLDNGVVFVGSRLG
Sbjct: 270 RYLLGDIAGRLFMLLLELSER-DGTASVRDLKVELLGDIPIPECMTYLDNGVVFVGSRLG 328
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DS LV+L D+ YV ME+FT+LAPI+DM VVDLERQGQ QL+TCSG FK GSLRI
Sbjct: 329 DSALVRLAAVRDDASQYVQPMETFTSLAPIVDMCVVDLERQGQNQLITCSGAFKMGSLRI 388
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI+E A IDLPGIKG+WAL++G + D TLVLSFVG TRVLTL+G EVEETE+
Sbjct: 389 IRNGIGIQEQASIDLPGIKGMWALTLGQGPHHD-TLVLSFVGQTRVLTLNGEEVEETEIK 447
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR--VSSWEPPNGKSISVVSCNKNQ 318
GF SD+QTF+ GNV ++QVT LI V++W P G+++SVVSC + +
Sbjct: 448 GFVSDRQTFFTGNVCHDQLIQVTDEGIRLIGRGPGGWNGVAAWAPA-GRAVSVVSCGETR 506
Query: 319 VLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWT 378
+ A G +Y + + ++ ++ + EVACLD+ P E L VGLWT
Sbjct: 507 AVAAAGLRIYLVAIKQGALELISEVCMNEEVACLDLGPGGEE---------ALLGVGLWT 557
Query: 379 DISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGR 438
DIS R+L LP L + E L GEIIPRS+L+ EG CYLL ALGDGSMFYF++DP SG
Sbjct: 558 DISVRVLKLPDLRPLHTEKLSGEIIPRSLLICVLEGVCYLLCALGDGSMFYFTVDPDSGV 617
Query: 439 LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSL 498
LT+KKKVTLGTQPTVL++FRSLSTTN+FACSDRPTVI+SSNHKLVFSNVNL++V HMCSL
Sbjct: 618 LTNKKKVTLGTQPTVLRSFRSLSTTNIFACSDRPTVIFSSNHKLVFSNVNLKEVAHMCSL 677
Query: 499 NAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDI 558
NA +YPDSLALATDST T GTIDEIQKLHIRTVPLGE PRRIAYQE+SQTFGVIT R+D
Sbjct: 678 NAVAYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGETPRRIAYQEASQTFGVITMRVDK 737
Query: 559 QEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIID 618
E G + +S + + + + PA ++ E+HNLLI+D
Sbjct: 738 VEWTGGC-----------GSLVRPSASTAAASASAAAPPSKHAPAPLDL--ELHNLLILD 784
Query: 619 QNTFE 623
+TFE
Sbjct: 785 HHTFE 789
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/285 (69%), Positives = 245/285 (85%), Gaps = 3/285 (1%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL+VAK +R+E++ VTPEGLRP+KE+ LYG++A MK FR P ++KDL+FI+T R
Sbjct: 24 TSPTDLNLLVAKVSRLEMYLVTPEGLRPMKEVGLYGRVAKMKLFRPPYEQKDLVFILTAR 83
Query: 744 YNAMILECR-GDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
YNAMILE R G LE++T+AHGNV+DRIGKPSENGI+A+IDP+ARVIGLRLY+GLFKI
Sbjct: 84 YNAMILEWRTGANGELEVVTRAHGNVADRIGKPSENGILAVIDPQARVIGLRLYDGLFKI 143
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
IPL+KD+ ELKA+S+R+EEL + D++FLHGC NPT+I IHQD+NGRH+KTHEI+L++KEF
Sbjct: 144 IPLDKDSTELKAASLRLEELNVYDLEFLHGCSNPTLILIHQDLNGRHIKTHEINLRDKEF 203
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
K PWKQDN+E EAS++IPVP PLGGAI+IGQESI+YH G+SYVAVAP IK+ I CY
Sbjct: 204 MKIPWKQDNVETEASILIPVPSPLGGAIVIGQESIVYHDGQSYVAVAPPQIKTP-INCYC 262
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+VD G RYLLGD+AGRLFMLLLE E+ DGT SV++ KVELLG+
Sbjct: 263 RVDVRGLRYLLGDIAGRLFMLLLELSER-DGTASVRDLKVELLGD 306
Score = 357 bits (915), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 158/220 (71%), Positives = 198/220 (90%), Gaps = 1/220 (0%)
Query: 1000 MEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEP 1059
+++E+HNLLI+D +TFE+LHAHQL E+A+SL+S K +DPN Y+ +GTA+++PEE+EP
Sbjct: 773 LDLELHNLLILDHHTFEVLHAHQLLANEFAMSLVSCKLADDPNHYYAVGTAILNPEESEP 832
Query: 1060 KQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLEC 1119
KQGRI++FH+ +GKL Q+AEKEIKG CY++ EFNGKLLASINSTVRLFEWT+EKELRLEC
Sbjct: 833 KQGRILLFHWCEGKLTQVAEKEIKGGCYTLVEFNGKLLASINSTVRLFEWTSEKELRLEC 892
Query: 1120 SHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE 1179
SHFNNI+AL+LKVKGDFILVGDLMRS++LLQYK MEGSFEEI+RDY+PNWMT++EILDD+
Sbjct: 893 SHFNNIVALYLKVKGDFILVGDLMRSMSLLQYKQMEGSFEEIARDYSPNWMTAVEILDDD 952
Query: 1180 LFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
FLGAENS+NLF+CQKDSAAT+DE+R + +G H VGD
Sbjct: 953 TFLGAENSFNLFVCQKDSAATTDEERQQMGYMGQFH-VGD 991
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 60/82 (73%), Gaps = 3/82 (3%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS TDLNL+VAK +R+E++ VTPEGLRP+KE+ LYG++A MK FR P ++KDL+FI+T
Sbjct: 22 NFTSPTDLNLLVAKVSRLEMYLVTPEGLRPMKEVGLYGRVAKMKLFRPPYEQKDLVFILT 81
Query: 685 QRTD---LNLVVAKNNRIEIHT 703
R + L N +E+ T
Sbjct: 82 ARYNAMILEWRTGANGELEVVT 103
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 2 GSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEWG 61
GSLRIIRNGIGI+E A IDLPGIKG+WAL++G + D TLVLSFVG TRVLTL+G E
Sbjct: 384 GSLRIIRNGIGIQEQASIDLPGIKGMWALTLGQGPHHD-TLVLSFVGQTRVLTLNGEEVE 442
Query: 62 FHLLRGFSS 70
++GF S
Sbjct: 443 ETEIKGFVS 451
>gi|198432471|ref|XP_002129229.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
DNA-binding protein 1) (UV-damaged DNA-binding factor)
(DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
(UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
pigmentosum group E-co... isoform 2 [Ciona intestinalis]
Length = 1142
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 313/558 (56%), Positives = 401/558 (71%), Gaps = 19/558 (3%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGDLAG LF+LLLE +E MDGT +V++ K+ELLGE+SIPE ++YLDNGVV++GSRLG
Sbjct: 270 RYLLGDLAGHLFILLLESDEMMDGTNTVRDLKIELLGEVSIPEAISYLDNGVVYIGSRLG 329
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL++L+ +P E +SV++++TNL PIIDM VVDL+RQGQGQ+VTCSG FKEGSLRI
Sbjct: 330 DSQLIRLHTTPVEV-HLISVLDTYTNLGPIIDMCVVDLDRQGQGQVVTCSGAFKEGSLRI 388
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
IRNGIGI+EHA IDLPGIKG+W L + +TLV+SFVGH+R+L LSG EVEET++
Sbjct: 389 IRNGIGIQEHASIDLPGIKGLWPLRVFDTSRSYDTLVISFVGHSRILQLSGEEVEETDLP 448
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF + QTFYC NV ++Q+T + LIS + +V W+P N + ISV +CNK+QVL
Sbjct: 449 GFDDESQTFYCSNVCHNQLVQITEKSIRLISHTERRQVHEWKPKNDRHISVATCNKSQVL 508
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEP---AKAQLAAVGLW 377
A G ++Y E+ E+ + A L +EVACL I PL ++ + E A + AVGLW
Sbjct: 509 LAIGSSLHYFEIQPGEVIERACVDLPHEVACLTIEPLVSDPSELEGPDFVTASICAVGLW 568
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
D +AR+L LP+LEE+ ++ L EIIPRSIL+ F+G YLLV LGDG++FYF+L+P +G
Sbjct: 569 NDNTARVLKLPTLEEMHQQKLADEIIPRSILLVQFDGINYLLVTLGDGTLFYFTLNPETG 628
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
++D+KKV LGTQPT L F S + VFACSDRPTV+YSSN KLVFSNVNL++V+HMC
Sbjct: 629 YISDRKKVPLGTQPTSLSVFTSGGSRTVFACSDRPTVVYSSNKKLVFSNVNLKEVSHMCP 688
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
L+++ YPDSLALA D+T GTIDEIQKLHIRTVPL E+PRRIAYQE SQ FG++T R D
Sbjct: 689 LDSDGYPDSLALANDNTLLIGTIDEIQKLHIRTVPLYESPRRIAYQEESQCFGLVTLRTD 748
Query: 558 IQEADGSTP--VRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLL 615
+A G RPSASTQA T S P +S F+ ++ +LL
Sbjct: 749 SVDATGDKMKITRPSASTQASVCTKS---------PPVDGRSVEG----FSATADIGSLL 795
Query: 616 IIDQNTFERNFTSSTDLN 633
IIDQ+TFE + D N
Sbjct: 796 IIDQHTFEVHHAYQLDTN 813
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 156/284 (54%), Positives = 214/284 (75%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T +DLNL+++KN R+E+ TVTPEGLRPVKEI +YG+IAV+KFFR + +DLLFI+T+R
Sbjct: 24 TSGSDLNLLISKNTRLELFTVTPEGLRPVKEINIYGRIAVLKFFRPEGEDRDLLFILTER 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y+ IL+ + EI+TKA G++SD +G+P E GII IIDP +++IGLRLY G+FK +
Sbjct: 84 YHGCILQYKATDGGCEIITKASGDLSDTVGRPPETGIIGIIDPTSKLIGLRLYEGVFKFL 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
P + + EL+ +IR+EEL + D +FLHG PT++ I+Q+ GRHVKT+ + +++KE
Sbjct: 144 PYDPTSEELRPFNIRIEELSVIDAKFLHGYTTPTLVIIYQNSQGRHVKTYIVDVRDKEVV 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
PWKQ+NI+ EA+ +I VP+PL G+IIIGQESI YH+G Y+ +AP TI CYA
Sbjct: 204 AGPWKQENIDAEANFIINVPKPLAGSIIIGQESITYHNGDKYIPIAPLCFFQDTINCYAP 263
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD +G RYLLGDLAG LF+LLLE +E MDGT +V++ K+ELLGE
Sbjct: 264 VDKDGSRYLLGDLAGHLFILLLESDEMMDGTNTVRDLKIELLGE 307
Score = 298 bits (762), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/248 (55%), Positives = 192/248 (77%), Gaps = 10/248 (4%)
Query: 983 KPGSTKQS---TANQPAD------FNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLI 1033
+P ++ Q+ T + P D F+ ++ +LLIIDQ+TFE+ HA+QL E LS++
Sbjct: 761 RPSASTQASVCTKSPPVDGRSVEGFSATADIGSLLIIDQHTFEVHHAYQLDTNEEPLSIM 820
Query: 1034 SSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFN 1093
S K G DPN+YFV+GTA V+ EE EPK GRI++FHY D KL +AEKE+KGA + +C+FN
Sbjct: 821 SCKLGSDPNSYFVVGTAFVYMEETEPKHGRILVFHYIDNKLTLVAEKEVKGAVFCLCQFN 880
Query: 1094 GKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT 1153
G +LA+IN++V +++WT EKELR ECS+ +NI+AL+LK KGDF+LVGDLMRS+++L YK
Sbjct: 881 GHVLAAINTSVSIYQWTTEKELRAECSNQSNILALYLKCKGDFVLVGDLMRSMSILNYKH 940
Query: 1154 MEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGT 1213
+EG+ +EI++DY+PNWMT++EILDD+ FLGAEN YN+FICQKDS AT+DE+R+ L+E
Sbjct: 941 VEGNLDEIAKDYSPNWMTAVEILDDDNFLGAENFYNVFICQKDSGATTDEERSKLREAAL 1000
Query: 1214 VHLVGDGL 1221
H VGD +
Sbjct: 1001 FH-VGDSI 1007
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 50/68 (73%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI+EHA IDLPGIKG+W L + +TLV+SFVGH+R+L LSG E
Sbjct: 383 EGSLRIIRNGIGIQEHASIDLPGIKGLWPLRVFDTSRSYDTLVISFVGHSRILQLSGEEV 442
Query: 61 GFHLLRGF 68
L GF
Sbjct: 443 EETDLPGF 450
>gi|198432469|ref|XP_002129207.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
DNA-binding protein 1) (UV-damaged DNA-binding factor)
(DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
(UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
pigmentosum group E-co... isoform 1 [Ciona intestinalis]
Length = 1150
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 312/562 (55%), Positives = 399/562 (70%), Gaps = 22/562 (3%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGDLAG LF+LLLE +E MDGT +V++ K+ELLGE+SIPE ++YLDNGVV++GSRLG
Sbjct: 269 RYLLGDLAGHLFILLLESDEMMDGTNTVRDLKIELLGEVSIPEAISYLDNGVVYIGSRLG 328
Query: 141 DSQLVKLNRSPDENG----TYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEG 196
DSQL++L G + +SV++++TNL PIIDM VVDL+RQGQGQ+VTCSG FKEG
Sbjct: 329 DSQLIRLPTDSSMEGRPKPSLISVLDTYTNLGPIIDMCVVDLDRQGQGQVVTCSGAFKEG 388
Query: 197 SLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEE 256
SLRIIRNGIGI+EHA IDLPGIKG+W L + +TLV+SFVGH+R+L LSG EVEE
Sbjct: 389 SLRIIRNGIGIQEHASIDLPGIKGLWPLRVFDTSRSYDTLVISFVGHSRILQLSGEEVEE 448
Query: 257 TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNK 316
T++ GF + QTFYC NV ++Q+T + LIS + +V W+P N + ISV +CNK
Sbjct: 449 TDLPGFDDESQTFYCSNVCHNQLVQITEKSIRLISHTERRQVHEWKPKNDRHISVATCNK 508
Query: 317 NQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEP---AKAQLAA 373
+QVL A G ++Y E+ E+ + A L +EVACL I PL ++ + E A + A
Sbjct: 509 SQVLLAIGSSLHYFEIQPGEVIERACVDLPHEVACLTIEPLVSDPSELEGPDFVTASICA 568
Query: 374 VGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLD 433
VGLW D +AR+L LP+LEE+ ++ L EIIPRSIL+ F+G YLLV LGDG++FYF+L+
Sbjct: 569 VGLWNDNTARVLKLPTLEEMHQQKLADEIIPRSILLVQFDGINYLLVTLGDGTLFYFTLN 628
Query: 434 PASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVN 493
P +G ++D+KKV LGTQPT L F S + VFACSDRPTV+YSSN KLVFSNVNL++V+
Sbjct: 629 PETGYISDRKKVPLGTQPTSLSVFTSGGSRTVFACSDRPTVVYSSNKKLVFSNVNLKEVS 688
Query: 494 HMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553
HMC L+++ YPDSLALA D+T GTIDEIQKLHIRTVPL E+PRRIAYQE SQ FG++T
Sbjct: 689 HMCPLDSDGYPDSLALANDNTLLIGTIDEIQKLHIRTVPLYESPRRIAYQEESQCFGLVT 748
Query: 554 TRIDIQEADGSTP--VRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEV 611
R D +A G RPSASTQA T S P +S F+ ++
Sbjct: 749 LRTDSVDATGDKMKITRPSASTQASVCTKS---------PPVDGRSVEG----FSATADI 795
Query: 612 HNLLIIDQNTFERNFTSSTDLN 633
+LLIIDQ+TFE + D N
Sbjct: 796 GSLLIIDQHTFEVHHAYQLDTN 817
Score = 335 bits (859), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 158/284 (55%), Positives = 216/284 (76%), Gaps = 1/284 (0%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T +DLNL+++KN R+E+ TVTPEGLRPVKEI +YG+IAV+KFFR + +DLLFI+T+R
Sbjct: 24 TSGSDLNLLISKNTRLELFTVTPEGLRPVKEINIYGRIAVLKFFRPEGEDRDLLFILTER 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y+ IL+ + EI+TKA G++SD +G+P E GII IIDP +++IGLRLY G+FK +
Sbjct: 84 YHGCILQYKATDGGCEIITKASGDLSDTVGRPPETGIIGIIDPTSKLIGLRLYEGVFKFL 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
P + + EL+ +IR+EEL + D +FLHG PT++ I+Q+ GRHVKT+ + +++KE
Sbjct: 144 PYDPTSEELRPFNIRIEELSVIDAKFLHGYTTPTLVIIYQNSQGRHVKTYIVDVRDKEVV 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
PWKQ+NI+ EA+ +I VP+PL G+IIIGQESI YH+G Y+ +AP IK TI CYA
Sbjct: 204 AGPWKQENIDAEANFIINVPKPLAGSIIIGQESITYHNGDKYIPIAPPQIK-DTINCYAP 262
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
VD +G RYLLGDLAG LF+LLLE +E MDGT +V++ K+ELLGE
Sbjct: 263 VDKDGSRYLLGDLAGHLFILLLESDEMMDGTNTVRDLKIELLGE 306
Score = 298 bits (762), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/248 (55%), Positives = 192/248 (77%), Gaps = 10/248 (4%)
Query: 983 KPGSTKQS---TANQPAD------FNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLI 1033
+P ++ Q+ T + P D F+ ++ +LLIIDQ+TFE+ HA+QL E LS++
Sbjct: 765 RPSASTQASVCTKSPPVDGRSVEGFSATADIGSLLIIDQHTFEVHHAYQLDTNEEPLSIM 824
Query: 1034 SSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFN 1093
S K G DPN+YFV+GTA V+ EE EPK GRI++FHY D KL +AEKE+KGA + +C+FN
Sbjct: 825 SCKLGSDPNSYFVVGTAFVYMEETEPKHGRILVFHYIDNKLTLVAEKEVKGAVFCLCQFN 884
Query: 1094 GKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT 1153
G +LA+IN++V +++WT EKELR ECS+ +NI+AL+LK KGDF+LVGDLMRS+++L YK
Sbjct: 885 GHVLAAINTSVSIYQWTTEKELRAECSNQSNILALYLKCKGDFVLVGDLMRSMSILNYKH 944
Query: 1154 MEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGT 1213
+EG+ +EI++DY+PNWMT++EILDD+ FLGAEN YN+FICQKDS AT+DE+R+ L+E
Sbjct: 945 VEGNLDEIAKDYSPNWMTAVEILDDDNFLGAENFYNVFICQKDSGATTDEERSKLREAAL 1004
Query: 1214 VHLVGDGL 1221
H VGD +
Sbjct: 1005 FH-VGDSI 1011
Score = 86.3 bits (212), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 50/68 (73%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI+EHA IDLPGIKG+W L + +TLV+SFVGH+R+L LSG E
Sbjct: 387 EGSLRIIRNGIGIQEHASIDLPGIKGLWPLRVFDTSRSYDTLVISFVGHSRILQLSGEEV 446
Query: 61 GFHLLRGF 68
L GF
Sbjct: 447 EETDLPGF 454
>gi|340381612|ref|XP_003389315.1| PREDICTED: DNA damage-binding protein 1-like [Amphimedon
queenslandica]
Length = 1142
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 286/555 (51%), Positives = 379/555 (68%), Gaps = 36/555 (6%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMD-GTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD GRL L LE E+M+ G ++ K+E+LGEISIP L+YLDNGVVFVGS
Sbjct: 269 RYLLGDFRGRLLTLFLEFSEEMESGMTNIVNMKLEVLGEISIPHTLSYLDNGVVFVGSTK 328
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLVKL+ SP ENG Y+ V+ES TN+ PI+DM VVDL++QG+ LV CSG K+G+LR
Sbjct: 329 GDSQLVKLSSSPLENGGYIDVLESMTNIGPILDMSVVDLDKQGRDVLVCCSGLGKDGALR 388
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSI-GSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
I+++GIGI E A IDLPGIKGIW+L G LD+T+VL+FVG T L L+G EVEETE
Sbjct: 389 IVKSGIGINEAASIDLPGIKGIWSLKCAGREDELDDTVVLTFVGQTMALRLAGEEVEETE 448
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ +DQQTFYC NV ++Q+T + L+ ++ + W PP+G+ IS +CN +Q
Sbjct: 449 LPALVTDQQTFYCSNVTGNAIIQITTKSVRLMDDKAMELICDWSPPDGRGISTAACNSSQ 508
Query: 319 VLCATGCDVYYLEVH-GS--EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVG 375
V+ A GCD+YYLEV GS E+ ++H + +EVACLDI+PLS TSS L AVG
Sbjct: 509 VMVAVGCDLYYLEVKPGSPGELLLISHTTMSHEVACLDINPLSEAGTSS------LCAVG 562
Query: 376 LWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPA 435
LWTDIS ++L++P E + +PLGG+IIPRS+LM G CYLL ALGDG + Y+++D
Sbjct: 563 LWTDISVQILNVPQFEHLFTQPLGGDIIPRSVLMVELGGACYLLCALGDGCLHYYTMDSE 622
Query: 436 SGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHM 495
+G+L K+V LGT+P VLK F+S T+VFACSD PT+I+ SN KL+FSNVN+++VN++
Sbjct: 623 TGQLRGGKRVVLGTKPIVLKQFKSDGVTSVFACSDHPTIIHFSNQKLLFSNVNVKEVNYI 682
Query: 496 CSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
C+LN+E++ +SLAL ST FG +D+IQ LHI T+PLGE+PR IAYQESSQTF V R
Sbjct: 683 CTLNSEAFQNSLALVDSSTLIFGCVDQIQMLHIETIPLGESPRCIAYQESSQTFLVGGYR 742
Query: 556 IDIQEADGS-TPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNME------ 608
D D + TP R S ST+ N + + + P N+E
Sbjct: 743 TDKSGPDNTYTPSRQSVSTRTSNVSVAVV------------------PPQLNIEEFKCPQ 784
Query: 609 VEVHNLLIIDQNTFE 623
VE+H+L++ DQ TF+
Sbjct: 785 VEMHSLILFDQTTFD 799
Score = 219 bits (558), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 121/285 (42%), Positives = 183/285 (64%), Gaps = 10/285 (3%)
Query: 688 DLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
DLNL+ AK + + + VT EGL+PV ++ ++G+I ++ FR ++ DLLFI+T RY+
Sbjct: 28 DLNLIQAKGSNLAVSLVTSEGLKPVLDVDVFGRILAIQLFRPQGERMDLLFILTARYHVA 87
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
I+ I N ++LT+A+G++ +R+GKP+ +A++DP ++I L LY G KI+PL+
Sbjct: 88 IVG-YDPIAN-DVLTRAYGDIKERVGKPTLGKNVAMVDPSCQLIALHLYTGQLKIVPLQF 145
Query: 808 DNFE-LKASSIRMEELEIQDVQFLHGCQNPTIICIHQD---VNGRHVKTHEISLKEKEFT 863
D+ LKA +IR+E+L I D+QFLHG +NPTI I ++ GR +KT IS ++KE
Sbjct: 146 DSGSPLKAFNIRLEDLYITDIQFLHGTENPTIAYISEEPSVATGRVLKTFVISQRDKELL 205
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923
PWK + IE +ASL+ VP P G I++G +S+ Y + S+ V P +IK S I C
Sbjct: 206 PGPWKPNTIEGQASLLCSVPSPYNGLIVVGADSVAYFNDTSH-TVDPIVIKESVISCIEP 264
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMD-GTFSVKEPKVELLGE 967
+D + RYLLGD GRL L LE E+M+ G ++ K+E+LGE
Sbjct: 265 LDHS--RYLLGDFRGRLLTLFLEFSEEMESGMTNIVNMKLEVLGE 307
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 150/233 (64%), Gaps = 13/233 (5%)
Query: 986 STKQSTANQPADFNME------VEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF-- 1037
++ S A P N+E VE+H+L++ DQ TF++ H +QL P E+ L + S
Sbjct: 763 TSNVSVAVVPPQLNIEEFKCPQVEMHSLILFDQTTFDVSHVYQLCPQEHILCVTSCNLTT 822
Query: 1038 GEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLL 1097
++ + +V+GTA+V PEE E GRI++F + GKL+ + EK GA + + FNGK+L
Sbjct: 823 NDEERSVYVVGTALVKPEEKESSTGRILVFAVNSGKLELLHEKLENGAVFQVLGFNGKIL 882
Query: 1098 ASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS 1157
S+NS V + + L+ EC++ NNI+AL+LK KGDFILVGD++RSL LL YK E
Sbjct: 883 NSVNSGVFVNALV-DGALKEECAYKNNILALYLKTKGDFILVGDILRSLKLLVYKE-ELG 940
Query: 1158 FEEISRDYN--PNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHL 1208
EEI D+N P + T+IE++DDE +LGA+ + +FICQK++ ATS+ D ++
Sbjct: 941 LEEIGVDHNISPCFCTAIEMIDDENYLGADGRH-IFICQKNTEATSEADLLYM 992
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSI-GSPKNLDNTLVLSFVGHTRVLTLSGAE 59
+G+LRI+++GIGI E A IDLPGIKGIW+L G LD+T+VL+FVG T L L+G E
Sbjct: 384 DGALRIVKSGIGINEAASIDLPGIKGIWSLKCAGREDELDDTVVLTFVGQTMALRLAGEE 443
>gi|168066745|ref|XP_001785293.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663100|gb|EDQ49884.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1090
Score = 518 bits (1333), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/477 (53%), Positives = 342/477 (71%), Gaps = 12/477 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLL D G L++L++ +++ V VE LGE S L+YLDNGVVFVGS G
Sbjct: 267 RYLLSDHNGMLYLLVISHDKE-----RVSALNVEPLGETSAASTLSYLDNGVVFVGSSYG 321
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL++LN D +YV V+ES+ NL PI+D+ VVDLERQGQGQ+VTCSG FK+GSLRI
Sbjct: 322 DSQLIRLNHQADAKNSYVEVLESYVNLGPIVDLCVVDLERQGQGQVVTCSGAFKDGSLRI 381
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL-SGAEVEETEM 259
+RNGIGI E A +L GIKG+W+L S D LV+SF+ TR+L + + E+EETE+
Sbjct: 382 VRNGIGINEQASAELQGIKGMWSLRASSSDVYDTFLVVSFISETRILAMNTDDELEETEI 441
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF S+ QT +C N ++QVT + L+ +++ +++ W+ P +I+V + N +QV
Sbjct: 442 DGFDSEAQTLFCYNAVHDQLVQVTAGSLRLVDAKTRRQLTEWKAPAPMTINVATANASQV 501
Query: 320 LCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWT 378
L ATG ++ Y+E+ + ++AH LEYE++CLDI+P+ + P ++ L AVG+WT
Sbjct: 502 LLATGGGNLVYIEIGQGTLVEVAHVQLEYEISCLDINPVGDN-----PERSNLVAVGMWT 556
Query: 379 DISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGR 438
DIS R+ +LPSL + KE LGGEIIPRS+L F+G YLL ALGDG +F F+L+PA+G
Sbjct: 557 DISIRIFALPSLTLITKEMLGGEIIPRSVLFCSFDGIAYLLCALGDGHLFNFTLNPATGE 616
Query: 439 LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSL 498
L+D+KK++LGTQP L+TFRS +TT+VFA SDRPTVIYSSN KL++SNVNL++VNHMC
Sbjct: 617 LSDRKKISLGTQPIALRTFRSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVNHMCPF 676
Query: 499 NAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
N+ S+PDSLA+ + T GTIDEIQKLHIRTVPLGE PRRIA+QE S+TF + + +
Sbjct: 677 NSASFPDSLAIGKEGELTIGTIDEIQKLHIRTVPLGEHPRRIAHQEQSRTFAICSAK 733
Score = 263 bits (672), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 206/303 (67%), Gaps = 16/303 (5%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T +LNL++AK RIEIH +T GL+P+ ++ +YG+IA ++ FR P + +D+LFI +R
Sbjct: 25 TNPQELNLIIAKCTRIEIHLLTASGLQPMLDVPIYGRIATLELFRPPGESQDVLFISFER 84
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y +L+ D + ++T+A G+VSDRIG+P++NG I I+DP+ R+IGL LY+GLFK+I
Sbjct: 85 YKFCVLQW--DAETGLLVTRAMGDVSDRIGRPTDNGQIGIVDPDCRLIGLHLYDGLFKVI 142
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEF 862
P++ +A +IR+EEL++ D++FL+GC PTI ++QD + RHVKT+E+ LKEK+F
Sbjct: 143 PIDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIAVLYQDNKDARHVKTYEVQLKEKDF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
+ PW Q+N++ A L+IPVP PLGGAIIIG+++I+Y++G + A+ I+ S Y
Sbjct: 203 GEGPWLQNNLDNGAGLLIPVPLPLGGAIIIGEQTIVYYNGSVFKAIP---IRPSITKAYG 259
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYI 982
+VD++G RYLL D G L++L++ +++ V VE LGE S+LSY+
Sbjct: 260 RVDSDGSRYLLSDHNGMLYLLVISHDKE-----RVSALNVEPLGETSAA-----STLSYL 309
Query: 983 KPG 985
G
Sbjct: 310 DNG 312
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 161/231 (69%), Gaps = 4/231 (1%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
S P ++E H + +I+ TFEI+ L P E S+I+ F +D N Y+ +GT
Sbjct: 731 SAKYAPGSNGEDMETHYVRLIEDQTFEIISGFPLDPYENGCSIITCSFTDDSNVYYCVGT 790
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
A PEE+EP +GRI++F +DGK+Q +AEKE+KGA Y++ FNGKLLA IN + L++W
Sbjct: 791 AYALPEESEPSKGRILVFSVEDGKIQLVAEKEVKGAVYNLNAFNGKLLAGINQKIALYKW 850
Query: 1110 T----NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDY 1165
T +EL+ E SH +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDY
Sbjct: 851 TLRDDGTRELQYESSHHGHILALYVQSRGDFIVVGDLMKSISLLIYKPEEGAIEERARDY 910
Query: 1166 NPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
N NWMT++EILDD+ +LGAENS+NLF +K++ A +DE+R L+ VG HL
Sbjct: 911 NANWMTAVEILDDDTYLGAENSFNLFTVRKNNDAATDEERGRLEVVGEYHL 961
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 45/61 (73%)
Query: 626 FTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 685
FT+ +LNL++AK RIEIH +T GL+P+ ++ +YG+IA ++ FR P + +D+LFI +
Sbjct: 24 FTNPQELNLIIAKCTRIEIHLLTASGLQPMLDVPIYGRIATLELFRPPGESQDVLFISFE 83
Query: 686 R 686
R
Sbjct: 84 R 84
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A +L GIKG+W+L S D LV+SF+ TR+L ++
Sbjct: 376 DGSLRIVRNGIGINEQASAELQGIKGMWSLRASSSDVYDTFLVVSFISETRILAMN 431
>gi|168047617|ref|XP_001776266.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672361|gb|EDQ58899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1089
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/477 (52%), Positives = 341/477 (71%), Gaps = 12/477 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLL D G L++L++ +++ V VE LGE S L+YLDNGVVFVGS G
Sbjct: 267 RYLLSDHNGMLYLLVISHDKE-----RVSALNVEPLGETSAASTLSYLDNGVVFVGSSYG 321
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL++LN D G+YV V+ESF NL PI+D+ VVDLERQGQGQ+VTCSG FK+GSLRI
Sbjct: 322 DSQLIRLNHQADVKGSYVEVLESFVNLGPIVDLCVVDLERQGQGQVVTCSGAFKDGSLRI 381
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL-SGAEVEETEM 259
+RNGIGI E A ++L GIKG+W+L S D LV+SF+ TR+L + + E+EETE+
Sbjct: 382 VRNGIGINEQASVELQGIKGMWSLRASSSDVYDTFLVVSFISETRILAMNTDDELEETEI 441
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF S+ QT +C N ++QVT + L++ +++ +++ W+ P +I+V + N +QV
Sbjct: 442 DGFDSEAQTLFCHNAVHDQLVQVTAGSLRLVNAKTRKQLTEWKAPAPMTINVATANASQV 501
Query: 320 LCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWT 378
L ATG ++ Y+E+ + +AH LEYE++CLDI+P+ P ++ L AVG+WT
Sbjct: 502 LLATGGGNLVYIEIGQGTLTGVAHSQLEYEISCLDINPVG-----ENPERSNLVAVGMWT 556
Query: 379 DISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGR 438
DIS R+ +LPSL + KE LGGEIIPRS+L F+G YLL A+GDG +F F L+P++G
Sbjct: 557 DISVRIFALPSLTLINKEMLGGEIIPRSVLFCSFDGLAYLLCAVGDGHLFNFMLNPSTGE 616
Query: 439 LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSL 498
L+D+KK++LGTQP L+TFRS +TT+VFA SDRPTVIYSSN KL++SNVNL++VNHMC
Sbjct: 617 LSDRKKISLGTQPIALRTFRSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVNHMCPF 676
Query: 499 NAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
N+ S+PDSLA+ + T GTID+IQKLHIRTVPLGE P RIA+QE S++F + + +
Sbjct: 677 NSASFPDSLAIGKEGELTIGTIDDIQKLHIRTVPLGERPCRIAHQEQSRSFAICSAK 733
Score = 260 bits (664), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 205/303 (67%), Gaps = 16/303 (5%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T +LNL++AK RIEIH +T GL+ + ++ LYG+IA ++ FR P + +D+LFI +R
Sbjct: 25 TNPQELNLIIAKCTRIEIHLLTASGLQSMLDVPLYGRIATLELFRPPGESQDVLFISFER 84
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y +L+ D + +T+A G+VSDR G+P++NG I I+DP+ R+IGL LY+G+FK+I
Sbjct: 85 YKFCVLQW--DAETGSPITRAMGDVSDRTGRPTDNGQIGIVDPDCRLIGLHLYDGMFKVI 142
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEF 862
P++ +A +IR+EEL++ D++FL+GC NPTI ++QD + RHVKT+E++LKEK+F
Sbjct: 143 PIDNKGQLKEAFNIRLEELQVLDIKFLYGCANPTIAVLYQDNKDARHVKTYEVNLKEKDF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
+ PW Q+N++ A L+IPVP PLGGAIIIG+++I+Y++G + A+ I+ S Y
Sbjct: 203 GEGPWLQNNLDNGAGLLIPVPLPLGGAIIIGEQTIVYYNGSVFKAIP---IRPSITKAYG 259
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYI 982
+VD++G RYLL D G L++L++ +++ V VE LGE S+LSY+
Sbjct: 260 RVDSDGSRYLLSDHNGMLYLLVISHDKE-----RVSALNVEPLGETSAA-----STLSYL 309
Query: 983 KPG 985
G
Sbjct: 310 DNG 312
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 157/221 (71%), Gaps = 3/221 (1%)
Query: 999 NMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENE 1058
N ++E H + +I+ TFEI L E S+I+ F +D N Y+ +GTA PEE+E
Sbjct: 740 NEDIETHYVRLIEDQTFEITSGFALDLYEIGCSIITCSFTDDSNVYYCVGTAYALPEESE 799
Query: 1059 PKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT---NEKEL 1115
P +GRI++F +DGKLQ +AEKE+KGA Y++ FNGKLLA IN + L++WT + L
Sbjct: 800 PTKGRILVFLVEDGKLQLVAEKEMKGAVYNLNAFNGKLLAGINQKIALYKWTLRDGTRVL 859
Query: 1116 RLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
+E SH +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWMT++EI
Sbjct: 860 EIESSHHGHILALYVQSRGDFIVVGDLMKSISLLIYKPEEGAIEERARDYNANWMTAVEI 919
Query: 1176 LDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
LDD+ +LGAENS+NLF +K++ A +DE+R L+ VG HL
Sbjct: 920 LDDDTYLGAENSFNLFTVRKNNDAATDEERGRLEVVGEYHL 960
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A ++L GIKG+W+L S D LV+SF+ TR+L ++
Sbjct: 376 DGSLRIVRNGIGINEQASVELQGIKGMWSLRASSSDVYDTFLVVSFISETRILAMN 431
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 44/61 (72%)
Query: 626 FTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 685
FT+ +LNL++AK RIEIH +T GL+ + ++ LYG+IA ++ FR P + +D+LFI +
Sbjct: 24 FTNPQELNLIIAKCTRIEIHLLTASGLQSMLDVPLYGRIATLELFRPPGESQDVLFISFE 83
Query: 686 R 686
R
Sbjct: 84 R 84
>gi|302788810|ref|XP_002976174.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
gi|300156450|gb|EFJ23079.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
Length = 1089
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 252/478 (52%), Positives = 342/478 (71%), Gaps = 12/478 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLL D G L +L++ E V KVELLGE S L+YLDNGVV+VGS G
Sbjct: 267 RYLLSDHTGSLHLLVITHERD-----RVLGLKVELLGETSAASSLSYLDNGVVYVGSSYG 321
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KLN D +YV V+ESF NL PI+D+ VVDLERQGQGQ+VTCSG +K+GSLRI
Sbjct: 322 DSQLIKLNAQVDSRNSYVEVLESFVNLGPIVDLCVVDLERQGQGQVVTCSGAYKDGSLRI 381
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETEM 259
+RNGIGI E A +L GIKG+W+L S D LV+SF+ TR+L ++ E+EETE+
Sbjct: 382 VRNGIGINEQASAELQGIKGMWSLRATSKDVFDIFLVVSFISETRILAMNMDDELEETEI 441
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF S+ QT +C N ++QVT ++ L+ S+ +++ W P+G +I+V + N +QV
Sbjct: 442 EGFDSEAQTLFCHNAIHDQIIQVTSTSLRLVDATSRRQLTEWRTPSGVAINVATANASQV 501
Query: 320 LCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWT 378
L ATG ++ Y+E+ + ++ H L+ E++CLDI+P+ ++P ++ +AAVG+WT
Sbjct: 502 LLATGGGNLVYIEIGRGSLTEVKHVQLQNEISCLDINPIG-----TDPDRSNIAAVGMWT 556
Query: 379 DISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGR 438
DIS ++ SLP+LE + KE LGGEIIPRS+L+ FEG YLL ALGDG +F F +D ++G+
Sbjct: 557 DISVQVFSLPNLEVLAKESLGGEIIPRSVLICAFEGVSYLLCALGDGHLFNFLIDTSTGQ 616
Query: 439 LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSL 498
L+D+KK++LGTQP +L+TFRS + T+VFA SDRPTVIYSSN KL++SNVNL++VNHMC
Sbjct: 617 LSDRKKISLGTQPIMLRTFRSKNATHVFAASDRPTVIYSSNKKLLYSNVNLKEVNHMCPF 676
Query: 499 NAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRI 556
N+ S+PDSLA+ + T GTID+IQKLHIRTV LGE PRRI +QE ++TFG+ T R
Sbjct: 677 NSASFPDSLAIGKEGELTIGTIDDIQKLHIRTVALGEHPRRICHQEQTRTFGLCTARF 734
Score = 276 bits (705), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 143/323 (44%), Positives = 215/323 (66%), Gaps = 19/323 (5%)
Query: 688 DLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
+LNL++AK RIE H +T +GL+P+ ++ +YG+IA ++ FR P + +D+LF+ T+RY
Sbjct: 29 ELNLIIAKCTRIEFHLLTAQGLQPLLDVPIYGRIATLELFRPPGETQDVLFVSTERYKFC 88
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
+L+ D + E++T+A G+VSDRIG+P++NG I I+DPE R+IGL LY+GLFK+IP++
Sbjct: 89 VLQW--DSETTELVTRAMGDVSDRIGRPTDNGQIGIVDPECRLIGLHLYDGLFKVIPIDN 146
Query: 808 DNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEFTKTP 866
+A +IR+EEL++ D++FL+GC PTI ++QD + RHVKT+EI LKEK+F + P
Sbjct: 147 KGQLKEAFNIRLEELQVLDIKFLYGCSKPTIAVLYQDNKDARHVKTYEIQLKEKDFGEGP 206
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDA 926
W Q+N++ A ++IPVP PLGG IIIG+++I+Y+SG ++ A+ I+ S Y KVDA
Sbjct: 207 WLQNNLDNGAGMLIPVPTPLGGVIIIGEQTIVYYSGSAFKAIP---IRPSITKAYGKVDA 263
Query: 927 NGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPGS 986
+G RYLL D G L +L++ E V KVELLGE SSLSY+ G
Sbjct: 264 DGSRYLLSDHTGSLHLLVITHERD-----RVLGLKVELLGETSAA-----SSLSYLDNGV 313
Query: 987 TKQSTA---NQPADFNMEVEVHN 1006
++ +Q N +V+ N
Sbjct: 314 VYVGSSYGDSQLIKLNAQVDSRN 336
Score = 240 bits (612), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 158/217 (72%), Gaps = 3/217 (1%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
E H + ++D TFE+L ++ L E ++I+ F +DP TY+ +GTA PEENEP +G
Sbjct: 744 ESHFVKLLDDQTFEVLGSYNLDTFENGCTIITCSFTDDPATYYCVGTAYALPEENEPSKG 803
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNE---KELRLEC 1119
RI+IF +DGK Q + EKE KGA Y++ FNGKLLA IN ++L++WT +EL+ EC
Sbjct: 804 RILIFTVEDGKFQLVTEKETKGAVYNLNAFNGKLLAGINQKIQLYKWTQRDSTRELQSEC 863
Query: 1120 SHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE 1179
H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWMT++EILDD+
Sbjct: 864 GHHGHILALYVQSRGDFIVVGDLMKSISLLLYKPEEGAIEERARDYNANWMTAVEILDDD 923
Query: 1180 LFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
++LGAENS+NLF +K+S A +DE+R L+ VG HL
Sbjct: 924 IYLGAENSFNLFTVRKNSDAATDEERGRLEVVGEYHL 960
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A +L GIKG+W+L S D LV+SF+ TR+L ++
Sbjct: 376 DGSLRIVRNGIGINEQASAELQGIKGMWSLRATSKDVFDIFLVVSFISETRILAMN 431
>gi|302769568|ref|XP_002968203.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
gi|300163847|gb|EFJ30457.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
Length = 1089
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 251/478 (52%), Positives = 341/478 (71%), Gaps = 12/478 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLL D G L +L++ E V KVELLGE S L+YLDNGVV+VGS G
Sbjct: 267 RYLLSDHTGSLHLLVITHERD-----RVLGLKVELLGETSAASSLSYLDNGVVYVGSSYG 321
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KLN D +YV V+ESF NL PI+D+ VVDLERQGQGQ+VTCSG +K+GSLRI
Sbjct: 322 DSQLIKLNAQVDSRNSYVEVLESFVNLGPIVDLCVVDLERQGQGQVVTCSGAYKDGSLRI 381
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETEM 259
+RNGIGI E A +L GIKG+W+L S D LV+SF+ TR+L ++ E+EETE+
Sbjct: 382 VRNGIGINEQASAELQGIKGMWSLRATSKDVFDIFLVVSFISETRILAMNMDDELEETEI 441
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF S+ QT +C N ++QVT ++ L+ S+ +++ W P+ +I+V + N +QV
Sbjct: 442 EGFDSEAQTLFCHNAIHDQIIQVTSTSLRLVDATSRRQLTEWRTPSAVAINVATANASQV 501
Query: 320 LCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWT 378
L ATG ++ Y+E+ + ++ H L+ E++CLDI+P+ ++P ++ +AAVG+WT
Sbjct: 502 LLATGGGNLVYIEIGRGSLTEVKHVQLQNEISCLDINPIG-----TDPDRSNIAAVGMWT 556
Query: 379 DISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGR 438
DIS ++ SLP+LE + KE LGGEIIPRS+L+ FEG YLL ALGDG +F F +D ++G+
Sbjct: 557 DISVQVFSLPNLEVLAKESLGGEIIPRSVLICAFEGVSYLLCALGDGHLFNFLIDTSNGQ 616
Query: 439 LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSL 498
L+D+KK++LGTQP +L+TFRS + T+VFA SDRPTVIYSSN KL++SNVNL++VNHMC
Sbjct: 617 LSDRKKISLGTQPIMLRTFRSKNATHVFAASDRPTVIYSSNKKLLYSNVNLKEVNHMCPF 676
Query: 499 NAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRI 556
N+ S+PDSLA+ + T GTID+IQKLHIRTV LGE PRRI +QE ++TFG+ T R
Sbjct: 677 NSASFPDSLAIGKEGELTIGTIDDIQKLHIRTVALGEHPRRICHQEQTRTFGLCTARF 734
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 140/304 (46%), Positives = 207/304 (68%), Gaps = 16/304 (5%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T +LNL++AK RIE H +T +GL+P+ ++ +YG+IA ++ FR P + +D+LF+ T+
Sbjct: 24 FTSPHELNLIIAKCTRIEFHLLTAQGLQPLLDVPIYGRIATLELFRPPGETQDVLFVSTE 83
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
RY +L+ D + E++T+A G+VSDRIG+P++NG I I+DPE R+IGL LY+GLFK+
Sbjct: 84 RYKFCVLQW--DSETTELVTRAMGDVSDRIGRPTDNGQIGIVDPECRLIGLHLYDGLFKV 141
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKE 861
IP++ +A +IR+EEL++ D++FL+GC PTI ++QD + RHVKT+EI LKEK+
Sbjct: 142 IPIDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIAVLYQDNKDARHVKTYEIQLKEKD 201
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCY 921
F + PW Q+N++ A ++IPVP PLGG IIIG+++I+Y+SG ++ A+ I+ S Y
Sbjct: 202 FGEGPWSQNNLDNGAGMLIPVPTPLGGVIIIGEQTIVYYSGSAFKAIP---IRPSITKAY 258
Query: 922 AKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSY 981
KVDA+G RYLL D G L +L++ E V KVELLGE SSLSY
Sbjct: 259 GKVDADGSRYLLSDHTGSLHLLVITHERD-----RVLGLKVELLGETSAA-----SSLSY 308
Query: 982 IKPG 985
+ G
Sbjct: 309 LDNG 312
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 158/217 (72%), Gaps = 3/217 (1%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
E H + ++D TFE+L ++ L E ++I+ F +DP TY+ +GTA PEENEP +G
Sbjct: 744 ESHFVKLLDDQTFEVLGSYNLDTFENGCTIITCSFTDDPATYYCVGTAYALPEENEPSKG 803
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNE---KELRLEC 1119
RI+IF +DGK Q + EKE KGA Y++ FNGKLLA IN ++L++WT +EL+ EC
Sbjct: 804 RILIFTVEDGKFQLVTEKETKGAVYNLNAFNGKLLAGINQKIQLYKWTQRDSTRELQSEC 863
Query: 1120 SHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE 1179
H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWMT++EILDD+
Sbjct: 864 GHHGHILALYVQSRGDFIVVGDLMKSISLLLYKPEEGAIEERARDYNANWMTAVEILDDD 923
Query: 1180 LFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
++LGAENS+NLF +K+S A +DE+R L+ VG HL
Sbjct: 924 IYLGAENSFNLFTVRKNSDAATDEERGRLEVVGEYHL 960
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A +L GIKG+W+L S D LV+SF+ TR+L ++
Sbjct: 376 DGSLRIVRNGIGINEQASAELQGIKGMWSLRATSKDVFDIFLVVSFISETRILAMN 431
>gi|324502823|gb|ADY41238.1| DNA damage-binding protein 1, partial [Ascaris suum]
Length = 1129
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 268/546 (49%), Positives = 366/546 (67%), Gaps = 28/546 (5%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+RYLLGDL+GR+FMLLL+ + DGT SVK+ KVELLGE SIPEC+ YLDNGVVF+GSR
Sbjct: 266 QRYLLGDLSGRIFMLLLDLDVATDGTASVKDLKVELLGETSIPECVVYLDNGVVFIGSRF 325
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLV+L P +G+Y+S+M+++ NLAPI DMVV++ + GQ Q++TCSG FK+GSLR
Sbjct: 326 GDSQLVRLRSEPCPDGSYISLMDTYVNLAPIRDMVVINAD--GQQQVITCSGAFKDGSLR 383
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
IIRNGIGIEE A ++LPG+K ++ L++ S LD+ LV+ FV T +L +SG E+E+T++
Sbjct: 384 IIRNGIGIEELASVELPGVKALFTLNVES--ELDDYLVVGFVDETHILKISGEELEDTQL 441
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNK--N 317
GF++ +QT + G V + Q+TP +LI + +WEPP+ ISVVS N+
Sbjct: 442 PGFSTTEQTLWAGRVGSGGIAQITPLKVVLIL---RGNTLTWEPPS--RISVVSVNELSG 496
Query: 318 QVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
QV+ A G ++YL + +I + + E+E+AC+D+ + +E +++L AV W
Sbjct: 497 QVVLACGNQLHYL-LLTDKITPITNIECEFEIACIDVGCVGDE------IESKLCAVAYW 549
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TD+S L SLP L E+ +E GGE++ RS+L+ EG YLLVALGDG+++Y+ +D SG
Sbjct: 550 TDMSVALRSLPDLNEIVREKCGGEMLARSLLICMMEGIVYLLVALGDGTLYYYQIDMNSG 609
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
LT KK TLGTQPT LK F S NVFACSDRPTVIYSS+ KLVFSNVNL+ V HMC+
Sbjct: 610 ALTQPKKATLGTQPTTLKKFMSRGARNVFACSDRPTVIYSSSQKLVFSNVNLKLVAHMCA 669
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
LN+ +Y DSL + T G ID+IQKLHIRTVPLGE+ RIAYQ + T ++ R +
Sbjct: 670 LNSATYTDSLVMTDGQTLVIGRIDDIQKLHIRTVPLGESVSRIAYQPETGTIAILVQRNE 729
Query: 558 IQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLII 617
+ADG AS A N +SS S + ++A P E+EV ++++
Sbjct: 730 FVDADGKHHCGHCASKMAVNASSSHPSVV----------TSATTPPIEPEEIEVSSVVVF 779
Query: 618 DQNTFE 623
D NT E
Sbjct: 780 DANTLE 785
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/286 (46%), Positives = 198/286 (69%), Gaps = 7/286 (2%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNLV+AK NR+E+ VTP+GL+ +E+ ++G+IA +K FR + D + ++TQ+
Sbjct: 24 TGPNDLNLVLAKTNRLELMVVTPDGLKSYREVPVFGRIAAVKAFRVKNESVDSILVLTQK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
++ IL C N E+ T+A G+++DR+G+ SE GIIA + ++ RLY+GL K++
Sbjct: 84 HHLAIL-CWDS--NGELRTRASGHIADRVGRHSETGIIACVHSSG-LMAFRLYDGLIKVV 139
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
+ + +L+ +IR E+L I D+ FL + PT++ I++D NGRH+K I+L++KE +
Sbjct: 140 QWTEGS-DLRGFNIRCEDLYIVDLDFLSDPEKPTVVYIYRDHNGRHLKAAAINLEDKELS 198
Query: 864 KTP-WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYH-SGKSYVAVAPQIIKSSTIVCY 921
P WKQDNIE EA +VIP+P+P GG I++G E+I YH +Y A+AP +I S I CY
Sbjct: 199 SPPLWKQDNIEAEACMVIPIPQPYGGVIVVGHEAISYHKDANAYSAIAPPLIHQSQISCY 258
Query: 922 AKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
K+D +G+RYLLGDL+GR+FMLLL+ + DGT SVK+ KVELLGE
Sbjct: 259 GKIDRDGQRYLLGDLSGRIFMLLLDLDVATDGTASVKDLKVELLGE 304
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 120/253 (47%), Positives = 167/253 (66%), Gaps = 8/253 (3%)
Query: 968 HCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGE 1027
HC + +S S+ + ++A P E+EV ++++ D NT EILH+H+L E
Sbjct: 741 HCASKMAVNASSSH----PSVVTSATTPPIEPEEIEVSSVVVFDANTLEILHSHELGKNE 796
Query: 1028 YALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY----DDGKLQQIAEKEIK 1083
A+S+ S G+DP Y+ +GTAVV +E E K GR++IF + G+++ + +KEIK
Sbjct: 797 LAMSIKSCVLGDDPQPYYAVGTAVVLTDETESKSGRLLIFQVAPSSEGGRMRLVHDKEIK 856
Query: 1084 GACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLM 1143
GA YS+ GKL+ +INS VRLFEWT EKELRLECS F+N+ AL+L+ K D +LVGDLM
Sbjct: 857 GAAYSIQVLMGKLVVAINSCVRLFEWTAEKELRLECSDFDNVTALYLRTKNDVVLVGDLM 916
Query: 1144 RSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDE 1203
RSL++L YK ME SFE+I+RD+ NWMT+ EI+D E FLGAE +NLF KD ++ +
Sbjct: 917 RSLSVLAYKPMESSFEKIARDFVTNWMTACEIIDMETFLGAEIMFNLFTVVKDCSSKDEG 976
Query: 1204 DRTHLQEVGTVHL 1216
R LQE G +L
Sbjct: 977 IRLQLQETGMYYL 989
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
+GSLRIIRNGIGIEE A ++LPG+K ++ L++ S LD+ LV+ FV T +L +SG E
Sbjct: 379 DGSLRIIRNGIGIEELASVELPGVKALFTLNVES--ELDDYLVVGFVDETHILKISGEEL 436
Query: 61 GFHLLRGFSSL-GSLWNG 77
L GFS+ +LW G
Sbjct: 437 EDTQLPGFSTTEQTLWAG 454
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFT DLNLV+AK NR+E+ VTP+GL+ +E+ ++G+IA +K FR + D + ++T
Sbjct: 22 NFTGPNDLNLVLAKTNRLELMVVTPDGLKSYREVPVFGRIAAVKAFRVKNESVDSILVLT 81
Query: 685 QRTDLNLVVAKNN 697
Q+ L ++ +N
Sbjct: 82 QKHHLAILCWDSN 94
>gi|194381178|dbj|BAG64157.1| unnamed protein product [Homo sapiens]
Length = 826
Score = 504 bits (1298), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/415 (61%), Positives = 316/415 (76%), Gaps = 14/415 (3%)
Query: 210 HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTF 269
+A IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+ GF DQQTF
Sbjct: 85 NASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTF 144
Query: 270 YCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYY 329
+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+ A G +YY
Sbjct: 145 FCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRALYY 204
Query: 330 LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS 389
L++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDISAR+L LPS
Sbjct: 205 LQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDISARILKLPS 259
Query: 390 LEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT 449
E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+D+KKVTLGT
Sbjct: 260 FELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGT 319
Query: 450 QPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLAL 509
QPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN++ YPDSLAL
Sbjct: 320 QPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLAL 379
Query: 510 ATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE-ADGSTPVR 568
A +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ FGV+++RI++Q+ + G+T +R
Sbjct: 380 ANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALR 439
Query: 569 PSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFE 623
PSASTQA +++ S+ STA F EVEVHNLLIIDQ+TFE
Sbjct: 440 PSASTQALSSSVSSSK--------LFSSSTAPHETSFGEEVEVHNLLIIDQHTFE 486
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 461 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 520
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 521 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 580
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 581 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 640
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 641 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 686
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 51/66 (77%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTA 82
Query: 743 RYNAMI 748
+YNA I
Sbjct: 83 KYNASI 88
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNL 691
+ + ++
Sbjct: 82 AKYNASI 88
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 35/53 (66%)
Query: 16 HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEWGFHLLRGF 68
+A IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E L GF
Sbjct: 85 NASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMGF 137
>gi|328700785|ref|XP_001945395.2| PREDICTED: DNA damage-binding protein 1-like [Acyrthosiphon pisum]
Length = 1072
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 253/544 (46%), Positives = 372/544 (68%), Gaps = 7/544 (1%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD +G L ML L+ E+ ++G F V + + GEISIP LTYLDN V++V S+ G
Sbjct: 290 RYLLGDHSGCLLMLFLKYEKTLNGKFKVTDLYLRYFGEISIPISLTYLDNKVIYVASKFG 349
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KL+ +E G+++++++ + NL PI+DM +VD++++GQ Q+VTCSG +K+GSLRI
Sbjct: 350 DSQLIKLHYELNETGSHLTILDQYLNLGPIVDMCLVDIDQRGQEQIVTCSGAYKDGSLRI 409
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
I NG+GI+E A IDL GIKGIW+LS + +LD+TLVLSFV H++VL E EE +
Sbjct: 410 INNGVGIQEIATIDLLGIKGIWSLSFNTKSDLDDTLVLSFVWHSKVLAYDSEEAEEIYVE 469
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF S+ QTFYCG ++QVT ++ LI ESK +S W+ P ++I+ VSCN +Q +
Sbjct: 470 GFESELQTFYCGKTLDNKMVQVTSASVRLICMESKKLISEWKVPYFRNINAVSCNGHQAV 529
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
C++G D+YY+E+ +I Q H LE+EV+CLDI ++ + L A+GLWTD
Sbjct: 530 CSSGHDLYYIEIGSQKIFQNKHITLEHEVSCLDICLFKDKFGET----IILLAIGLWTDT 585
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
S ++L LP E+ KE L I+PRS+ E YL ALG+GS+ YF L+ +G+L
Sbjct: 586 SIKVLKLPDFVELEKENLFEGIVPRSVSFVTLENIHYLFCALGNGSLCYFYLNIETGKLY 645
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
K+ LG +P ++K F++ S+ +F CSD P +I+SSN KLVF+NVN +VN++C +N
Sbjct: 646 KNGKIKLGNRPALIKKFQTASS--IFICSDFPIIIHSSNKKLVFTNVNSIKVNNICMVNT 703
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
++YP+SL LATD+ G ID +K H+RT+PLGE+PRRIAYQE+S+TFG+IT + +I++
Sbjct: 704 DNYPNSLILATDTAIIIGVIDMEKKHHVRTIPLGESPRRIAYQEASKTFGIITIKKNIKD 763
Query: 561 ADGSTPVRPSASTQAQNTTSSTISSLSYIK-PGSTKQSTANQPADFNMEVEVHNLLIIDQ 619
PV PSAST+ QN TS+ + + S+ ++++ +DFN EVE+ +++I+ Q
Sbjct: 764 EMIKGPVHPSASTRTQNITSAMGNRFLIDQHLSSSSEASSLSDSDFNPEVEISSMIILHQ 823
Query: 620 NTFE 623
+TFE
Sbjct: 824 DTFE 827
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 157/225 (69%), Gaps = 4/225 (1%)
Query: 998 FNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEEN 1057
FN EVE+ +++I+ Q+TFEILH +QL+ EYALS+IS+K DPNTY+VLGTA++ E
Sbjct: 809 FNPEVEISSMIILHQDTFEILHVYQLYSNEYALSIISTKLANDPNTYYVLGTALMTEECQ 868
Query: 1058 EPKQGRIIIFHYDDG--KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKEL 1115
+PK+GRI++FHYD KL QI+EK + G C+SM F+ L+A++NS+V+L+ WT+EK+
Sbjct: 869 DPKEGRIVVFHYDTSLSKLTQISEKIVYGGCFSMVTFHDMLIATVNSSVQLYIWTHEKKF 928
Query: 1116 RLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
L C+ NN ++ +K G +IL GDLM+SL L +YKT E + E+I D W ++IEI
Sbjct: 929 VLRCTQNNNSLSQHVKTNGKYILCGDLMKSLALFKYKTDEPNLEKIVTDDCLKWSSAIEI 988
Query: 1176 LDDELFLGAENSYNLFICQKDSAATS-DEDRTHLQEVGTVHLVGD 1219
+DD+LF+GAEN L++ K S S D + +E+G HL GD
Sbjct: 989 IDDDLFIGAENDKYLYVFYKHSNFVSGDYQHNNFKEIGRFHL-GD 1032
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/278 (45%), Positives = 171/278 (61%), Gaps = 12/278 (4%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
NL+VAK N IEI+ + GL + E L GKI ++K FR + DL+F++T +YNAMIL
Sbjct: 62 NLIVAKLNCIEIYLINEHGLLLLSETELNGKIEILKVFRPKSKTTDLIFVVTAQYNAMIL 121
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
E D +E++TK H NV D G +E + IIDP A+++ L+L+ +FKIIPL+K+
Sbjct: 122 EYTQGSDKIEMMTKGHCNVFDHFGVATE--FMGIIDPNAKLVMLKLFEKMFKIIPLDKEG 179
Query: 810 FELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTPWKQ 869
EL SI MEE IQD+ FL+G NPTII I+++ GR +K + K
Sbjct: 180 -ELDVYSITMEETNIQDIGFLYGFTNPTIIIIYENAMGRTIKIKK--------IIDSKKY 230
Query: 870 DNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGE 929
+IE EAS+VIPVP PL GAIIIG+ SI YH+G + P I + IVCY +VD G
Sbjct: 231 KSIEKEASMVIPVPSPLCGAIIIGENSIFYHNGSCNIIRLP-IRQKIEIVCYTRVDLEGT 289
Query: 930 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
RYLLGD +G L ML L+ E+ ++G F V + + GE
Sbjct: 290 RYLLGDHSGCLLMLFLKYEKTLNGKFKVTDLYLRYFGE 327
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 49/70 (70%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
+GSLRII NG+GI+E A IDL GIKGIW+LS + +LD+TLVLSFV H++VL E
Sbjct: 404 DGSLRIINNGVGIQEIATIDLLGIKGIWSLSFNTKSDLDDTLVLSFVWHSKVLAYDSEEA 463
Query: 61 GFHLLRGFSS 70
+ GF S
Sbjct: 464 EEIYVEGFES 473
>gi|391335522|ref|XP_003742140.1| PREDICTED: DNA damage-binding protein 1-like [Metaseiulus
occidentalis]
Length = 1154
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 279/560 (49%), Positives = 358/560 (63%), Gaps = 36/560 (6%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
++LG + GRLF+L L +E K V ++LLG +SIPECL+YLDNGVVFVGSRLGD
Sbjct: 274 FILGGICGRLFILTLRRENK-----KVVSHSLDLLGSVSIPECLSYLDNGVVFVGSRLGD 328
Query: 142 SQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRII 201
SQL++++ ++ V+ES+TNL I+DM+VVDLE+QGQ QL+TCSG GSLRII
Sbjct: 329 SQLIRMH----AQEPFIEVLESYTNLGAILDMIVVDLEKQGQDQLITCSGQGACGSLRII 384
Query: 202 RNGIGIEEHACIDLPGIKGIWALSIGSPK-----NLDNTLVLSFVGHTRVLTLSGAEVEE 256
RNGIGI E AC++L GIKGIWAL + + + D+TLVLSFVG TRV S E E
Sbjct: 385 RNGIGIHELACVELSGIKGIWALRMNTAQLEEDTPTDDTLVLSFVGQTRVFNCSSTEELE 444
Query: 257 --TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSC 314
T F D QTF NV V+QVT LIS SK RV W PP G+ I+ +C
Sbjct: 445 QVTLPAAFDIDSQTFCARNVLGNQVIQVTDKRVNLISVTSKTRVDQWFPPEGEIITQCAC 504
Query: 315 NKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAV 374
N QV A + YLE+ + ++ LEYE+AC+D++ L E + + V
Sbjct: 505 NDVQVALALKNVLVYLEIRDGSLTEIKRTRLEYEIACMDLNTLDKEGD-----QTSIITV 559
Query: 375 GLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHC-YLLVALGDGSMFYFSLD 433
GLWTD+S +LSLP LE++ ++ L ++IPRS+L FEG YLL L DGS+FY+ L
Sbjct: 560 GLWTDVSILVLSLPDLEQLFRQELPKDVIPRSVLKITFEGSTDYLLCTLADGSLFYYHL- 618
Query: 434 PASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVN 493
++G LT +K+VTLGTQPT L+ FRS T +VFACSDRPTVIYSS KLVFS VNLR+V
Sbjct: 619 ASTGELTGQKRVTLGTQPTTLRKFRSQRTWSVFACSDRPTVIYSSTSKLVFSKVNLREVK 678
Query: 494 HMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553
HMCS ++E++PDSLALA++ F GTID IQKLHIRTVPLGE+PRRIAYQE + TFGVI
Sbjct: 679 HMCSFSSEAFPDSLALASEDEFVIGTIDAIQKLHIRTVPLGESPRRIAYQEETGTFGVIV 738
Query: 554 TRIDI----QEADGSTPVRPSASTQAQNTTSSTISSLSYIK------PGSTKQSTANQPA 603
+R D+ + A P + +AS A + S+ P + S P+
Sbjct: 739 SRSDMACSTRCASLDAPNKSNASPYAWHKDFSSFGHTQCADRVDSGIPSCSSTSLQRPPS 798
Query: 604 DFNMEVEVHNLLIIDQNTFE 623
+ E +LLIIDQNTFE
Sbjct: 799 GCD---ETFSLLIIDQNTFE 815
Score = 266 bits (679), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 124/270 (45%), Positives = 190/270 (70%), Gaps = 3/270 (1%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TD NL+VAKN R+EI T+T EGL+P+KE+ +YG+I+VMK FR P + KDLLF +T +
Sbjct: 24 TTPTDRNLIVAKNTRLEILTITEEGLKPIKEVNIYGRISVMKKFRYPNESKDLLFFLTDK 83
Query: 744 YNAMILECRGDI-DNLEILTKAHGNVSDRIGKPSENGIIAIID-PEARVIGLRLYNGLFK 801
YN ILE + +N E++T++HG VSD +PSE G + ++D P+ARVI LRLY+GL K
Sbjct: 84 YNVAILEFSAESSENFEVITRSHGCVSDPYARPSEAGNLVVVDQPKARVIALRLYDGLLK 143
Query: 802 IIPLEKDNFELKASSIRMEELEIQDVQFLHGCQ-NPTIICIHQDVNGRHVKTHEISLKEK 860
+IPL ++ EL++ +IR+EE +I D+ FL +P + ++++ RH+KTH I+L++K
Sbjct: 144 MIPLNREAKELRSYNIRVEEAQITDMCFLSSSSSDPVLAIVYEEQQTRHMKTHVIALRDK 203
Query: 861 EFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVC 920
E K PW Q N+++EA ++IPV + G II+G E+I+YH G+ Y+ + P ++++ I C
Sbjct: 204 ELMKGPWGQRNLDLEADMLIPVEDTETGVIIVGGETIVYHYGQDYICIQPSFLRTTKISC 263
Query: 921 YAKVDANGERYLLGDLAGRLFMLLLEKEEK 950
Y ++D N ++LG + GRLF+L L +E K
Sbjct: 264 YCRIDNNRLVFILGGICGRLFILTLRRENK 293
Score = 251 bits (642), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 156/214 (72%), Gaps = 1/214 (0%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
E +LLIIDQNTFE+LHA Q P EY +S+ S+K G DPN Y+++GTA ++ EE+EPK G
Sbjct: 802 ETFSLLIIDQNTFEVLHAMQFCPNEYGVSICSAKLGSDPNPYYIVGTAFINQEESEPKVG 861
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHF 1122
RI + + DGKL+ IAEKE GA YS+ EF+ KL +INSTVRL+ W EK+L+ EC+ F
Sbjct: 862 RIFVLRWHDGKLETIAEKEAAGAPYSIREFHQKLAIAINSTVRLYSWNAEKDLQSECTPF 921
Query: 1123 NNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFL 1182
NI+ L LK GD+ILVGDLMRS+TLL Y S EEI RDY NW T++EILD++ FL
Sbjct: 922 FNIVILHLKCLGDYILVGDLMRSMTLLNYNADITSLEEIGRDYQTNWTTAVEILDEDTFL 981
Query: 1183 GAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
AE++ NL++C++D +A +D+ R H+ EV HL
Sbjct: 982 AAESNLNLYVCKRDPSA-ADDTRQHMHEVALYHL 1014
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 44/63 (69%), Gaps = 5/63 (7%)
Query: 2 GSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPK-----NLDNTLVLSFVGHTRVLTLS 56
GSLRIIRNGIGI E AC++L GIKGIWAL + + + D+TLVLSFVG TRV S
Sbjct: 379 GSLRIIRNGIGIHELACVELSGIKGIWALRMNTAQLEEDTPTDDTLVLSFVGQTRVFNCS 438
Query: 57 GAE 59
E
Sbjct: 439 STE 441
>gi|186511557|ref|NP_001118940.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
gi|332657118|gb|AEE82518.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
Length = 1067
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/476 (53%), Positives = 338/476 (71%), Gaps = 14/476 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD AG + +L++ E EK+ G K+ELLGE SI ++YLDN VVFVGS
Sbjct: 246 RYLLGDHAGMIHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAVVFVGSSY 299
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLVKLN PD G+YV V+E + NL PI+D VVDLERQGQGQ+VTCSG FK+GSLR
Sbjct: 300 GDSQLVKLNLHPDAKGSYVEVLERYINLGPIVDFCVVDLERQGQGQVVTCSGAFKDGSLR 359
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 360 VVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMNLEDELEETE 419
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C + ++QVT ++ L+S+ ++ W P G +++V + N +Q
Sbjct: 420 IEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRDEWHAPAGFTVNVATANASQ 479
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ ++ ++ H LEYEV+CLDI+P+ + P +QLAAVG+W
Sbjct: 480 VLLATGGGHLVYLEIGDGKLTEVQHALLEYEVSCLDINPIGDN-----PNYSQLAAVGMW 534
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F +D +G
Sbjct: 535 TDISVRIFSLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQMDTTTG 594
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
+L D+KKV+LGTQP L+TF S S T+VFA SDRPTVIYSSN KL++SNVNL++V+HMC
Sbjct: 595 QLKDRKKVSLGTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 654
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553
N+ ++PDSLA+A + T GTID+IQKLHIRT+PLGE RRI +QE ++TFG+ +
Sbjct: 655 FNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQTRTFGICS 710
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 159/220 (72%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E E+H + ++D TFE + + L EY S++S F ED N Y+ +GTA V PEENEP
Sbjct: 719 ESEMHFVRLLDDQTFEFMSTYPLDSFEYGCSILSCSFTEDKNVYYCVGTAYVLPEENEPT 778
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELR 1116
+GRI++F +DG+LQ IAEKE KGA YS+ FNGKLLA+IN ++L++W +EL+
Sbjct: 779 KGRILVFIVEDGRLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 838
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWM+++EIL
Sbjct: 839 SECGHHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEIL 898
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DD+++LGAEN++NL +K+S +DE+R L+ VG HL
Sbjct: 899 DDDIYLGAENNFNLLTVKKNSEGATDEERGRLEVVGEYHL 938
Score = 224 bits (571), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 184/287 (64%), Gaps = 34/287 (11%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T +LNL+VAK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T+
Sbjct: 24 FTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATE 83
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
RY +L+ D ++ E++T+A G+VSDRIG+P++NG ++
Sbjct: 84 RYKFCVLQW--DPESSELITRAMGDVSDRIGRPTDNG---------------------QV 120
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKE 861
IP + +A +IR+EEL++ D++FL GC PTI ++QD + RHVKT+E+SLK+K+
Sbjct: 121 IPFDNKGQLKEAFNIRLEELQVLDIKFLFGCAKPTIAVLYQDNKDARHVKTYEVSLKDKD 180
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCY 921
F + PW Q++++ A L+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y
Sbjct: 181 FVEGPWSQNSLDNGADLLIPVPPPLCGVLIIGEETIVYCSASAFKAIP---IRPSITKAY 237
Query: 922 AKVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGE 967
+VD +G RYLLGD AG + +L++ E EK+ G K+ELLGE
Sbjct: 238 GRVDVDGSRYLLGDHAGMIHLLVITHEKEKVTGL------KIELLGE 278
Score = 73.2 bits (178), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 47/62 (75%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS +LNL+VAK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T
Sbjct: 23 NFTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIAT 82
Query: 685 QR 686
+R
Sbjct: 83 ER 84
Score = 63.5 bits (153), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 355 DGSLRVVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMN 410
>gi|15235577|ref|NP_192451.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
gi|55976605|sp|Q9M0V3.1|DDB1A_ARATH RecName: Full=DNA damage-binding protein 1a; AltName:
Full=UV-damaged DNA-binding protein 1a; Short=DDB1a
gi|7267302|emb|CAB81084.1| UV-damaged DNA binding factor-like protein [Arabidopsis thaliana]
gi|25054828|gb|AAN71904.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
gi|332657117|gb|AEE82517.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
Length = 1088
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/476 (53%), Positives = 338/476 (71%), Gaps = 14/476 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD AG + +L++ E EK+ G K+ELLGE SI ++YLDN VVFVGS
Sbjct: 267 RYLLGDHAGMIHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAVVFVGSSY 320
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLVKLN PD G+YV V+E + NL PI+D VVDLERQGQGQ+VTCSG FK+GSLR
Sbjct: 321 GDSQLVKLNLHPDAKGSYVEVLERYINLGPIVDFCVVDLERQGQGQVVTCSGAFKDGSLR 380
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 381 VVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMNLEDELEETE 440
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C + ++QVT ++ L+S+ ++ W P G +++V + N +Q
Sbjct: 441 IEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRDEWHAPAGFTVNVATANASQ 500
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ ++ ++ H LEYEV+CLDI+P+ + P +QLAAVG+W
Sbjct: 501 VLLATGGGHLVYLEIGDGKLTEVQHALLEYEVSCLDINPIGDN-----PNYSQLAAVGMW 555
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F +D +G
Sbjct: 556 TDISVRIFSLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQMDTTTG 615
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
+L D+KKV+LGTQP L+TF S S T+VFA SDRPTVIYSSN KL++SNVNL++V+HMC
Sbjct: 616 QLKDRKKVSLGTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 675
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553
N+ ++PDSLA+A + T GTID+IQKLHIRT+PLGE RRI +QE ++TFG+ +
Sbjct: 676 FNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQTRTFGICS 731
Score = 267 bits (682), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 134/287 (46%), Positives = 201/287 (70%), Gaps = 13/287 (4%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T +LNL+VAK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T+
Sbjct: 24 FTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATE 83
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
RY +L+ D ++ E++T+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+
Sbjct: 84 RYKFCVLQW--DPESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKV 141
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKE 861
IP + +A +IR+EEL++ D++FL GC PTI ++QD + RHVKT+E+SLK+K+
Sbjct: 142 IPFDNKGQLKEAFNIRLEELQVLDIKFLFGCAKPTIAVLYQDNKDARHVKTYEVSLKDKD 201
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCY 921
F + PW Q++++ A L+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y
Sbjct: 202 FVEGPWSQNSLDNGADLLIPVPPPLCGVLIIGEETIVYCSASAFKAIP---IRPSITKAY 258
Query: 922 AKVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGE 967
+VD +G RYLLGD AG + +L++ E EK+ G K+ELLGE
Sbjct: 259 GRVDVDGSRYLLGDHAGMIHLLVITHEKEKVTGL------KIELLGE 299
Score = 239 bits (610), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 159/220 (72%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E E+H + ++D TFE + + L EY S++S F ED N Y+ +GTA V PEENEP
Sbjct: 740 ESEMHFVRLLDDQTFEFMSTYPLDSFEYGCSILSCSFTEDKNVYYCVGTAYVLPEENEPT 799
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELR 1116
+GRI++F +DG+LQ IAEKE KGA YS+ FNGKLLA+IN ++L++W +EL+
Sbjct: 800 KGRILVFIVEDGRLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 859
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWM+++EIL
Sbjct: 860 SECGHHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEIL 919
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DD+++LGAEN++NL +K+S +DE+R L+ VG HL
Sbjct: 920 DDDIYLGAENNFNLLTVKKNSEGATDEERGRLEVVGEYHL 959
Score = 73.2 bits (178), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 47/62 (75%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS +LNL+VAK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T
Sbjct: 23 NFTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIAT 82
Query: 685 QR 686
+R
Sbjct: 83 ER 84
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 376 DGSLRVVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMN 431
>gi|312283457|dbj|BAJ34594.1| unnamed protein product [Thellungiella halophila]
Length = 1088
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/476 (53%), Positives = 338/476 (71%), Gaps = 14/476 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD AG + +L++ E EK+ G K+ELLGE SI ++YLDN VVFVGS
Sbjct: 267 RYLLGDHAGLIHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAVVFVGSSY 320
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLVKLN PD G+YV V+E + NL PI+D VVDLERQGQGQ+VTCSG FK+GSLR
Sbjct: 321 GDSQLVKLNLHPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAFKDGSLR 380
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
I+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TRVL ++ E+EETE
Sbjct: 381 IVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRVLAMNLEDELEETE 440
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C + ++QVT ++ L+S+ ++ W P G +++V + N +Q
Sbjct: 441 IEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRDEWHAPAGFTVNVATANASQ 500
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ ++ ++ H LEYEV+CLDI+P+ + P +QLA+VG+W
Sbjct: 501 VLLATGGGHLVYLEIGDGKLTEVQHAVLEYEVSCLDINPIGDN-----PNYSQLASVGMW 555
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F LD +G
Sbjct: 556 TDISVRIFSLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQLDTTTG 615
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
+L D+KKV+LGTQP L+TF S + T+VFA SDRPTVIYSSN KL++SNVNL++V+HMC
Sbjct: 616 QLKDRKKVSLGTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 675
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553
N+ ++PDSLA+A + T GTID+IQKLHIRT+PLGE RRI +QE ++TFG+ +
Sbjct: 676 FNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQTRTFGICS 731
Score = 269 bits (688), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 135/287 (47%), Positives = 201/287 (70%), Gaps = 13/287 (4%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T +LNL+VAK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T+
Sbjct: 24 FTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPMYGRIATLELFRPHGEAQDFLFIATE 83
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
RY +L+ D ++ E++T+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+
Sbjct: 84 RYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKV 141
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKE 861
IP + +A +IR+EEL++ D++FL GC PTI ++QD + RHVKT+E+SLK+K+
Sbjct: 142 IPFDNKGQLKEAFNIRLEELQVLDIKFLFGCAKPTIAVLYQDNKDARHVKTYEVSLKDKD 201
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCY 921
F + PW Q+N++ A L+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y
Sbjct: 202 FVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIP---IRPSITKAY 258
Query: 922 AKVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGE 967
+VD +G RYLLGD AG + +L++ E EK+ G K+ELLGE
Sbjct: 259 GRVDVDGSRYLLGDHAGLIHLLVITHEKEKVTGL------KIELLGE 299
Score = 236 bits (603), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 159/220 (72%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E E+H + ++D +FE + + L EY S++S F +D N Y+ +GTA V PEENEP
Sbjct: 740 ESEMHFVRLLDDQSFEFVSTYPLDAFEYGCSILSCSFADDKNVYYCVGTAYVLPEENEPT 799
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELR 1116
+GRI++F +DGKLQ IAEKE KG+ YS+ FNGKLLA+IN ++L++W +EL+
Sbjct: 800 KGRILVFIVEDGKLQLIAEKETKGSVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 859
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWM+++EIL
Sbjct: 860 SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 919
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DD+++LGAEN++NL +K+S +DE+R L+ VG HL
Sbjct: 920 DDDIYLGAENNFNLLTVKKNSEGATDEERGRLEVVGEYHL 959
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TRVL ++
Sbjct: 376 DGSLRIVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRVLAMN 431
>gi|297809743|ref|XP_002872755.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp.
lyrata]
gi|297318592|gb|EFH49014.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp.
lyrata]
Length = 1088
Score = 498 bits (1281), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/476 (53%), Positives = 338/476 (71%), Gaps = 14/476 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD AG + +L++ E EK+ G K+ELLGE SI ++YLDN VVFVGS
Sbjct: 267 RYLLGDHAGLIHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAVVFVGSSY 320
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLVKLN PD G+YV V+E + NL PI+D VVDLERQGQGQ+VTCSG FK+GSLR
Sbjct: 321 GDSQLVKLNLHPDAKGSYVEVLERYINLGPIVDFCVVDLERQGQGQVVTCSGAFKDGSLR 380
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 381 VVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMNLEDELEETE 440
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C + ++QVT ++ L+S+ ++ W P G +++V + N +Q
Sbjct: 441 IEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRDEWHAPAGFTVNVATANASQ 500
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ ++ ++ H LEYEV+CLDI+P+ + P +QLA+VG+W
Sbjct: 501 VLLATGGGHLVYLEIGDGKLTEVQHALLEYEVSCLDINPIGDN-----PNYSQLASVGMW 555
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F LD +G
Sbjct: 556 TDISVRIFSLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQLDTTTG 615
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
+L D+KKV+LGTQP L+TF S S T+VFA SDRPTVIYSSN KL++SNVNL++V+HMC
Sbjct: 616 QLKDRKKVSLGTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 675
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553
N+ ++PDSLA+A + T GTID+IQKLHIRT+PLGE RRI +QE ++TFG+ +
Sbjct: 676 FNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQTRTFGICS 731
Score = 269 bits (687), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 135/287 (47%), Positives = 201/287 (70%), Gaps = 13/287 (4%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T +LNL+VAK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T+
Sbjct: 24 FTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATE 83
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
RY +L+ D ++ E++T+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+
Sbjct: 84 RYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKV 141
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKE 861
IP + +A +IR+EEL++ D++FL GC PTI ++QD + RHVKT+E+SLK+K+
Sbjct: 142 IPFDNKGQLKEAFNIRLEELQVLDIKFLFGCAKPTIAVLYQDNKDARHVKTYEVSLKDKD 201
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCY 921
F + PW Q+N++ A L+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y
Sbjct: 202 FVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIP---IRPSITKAY 258
Query: 922 AKVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGE 967
+VD +G RYLLGD AG + +L++ E EK+ G K+ELLGE
Sbjct: 259 GRVDVDGSRYLLGDHAGLIHLLVITHEKEKVTGL------KIELLGE 299
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/256 (45%), Positives = 171/256 (66%), Gaps = 11/256 (4%)
Query: 965 LGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLF 1024
LGEH + + + ++ QS A E E+H + ++D TFE + + L
Sbjct: 711 LGEHARRICHQEQTRTFGICSLGNQSNAE-------ESEMHFVRLLDDQTFEFMSTYPLD 763
Query: 1025 PGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKG 1084
EY S++S F +D N Y+ +GTA V PEENEP +GRI++F +DG+LQ IAEKE KG
Sbjct: 764 SFEYGCSILSCSFTDDKNVYYCVGTAYVLPEENEPTKGRILVFIVEDGRLQLIAEKETKG 823
Query: 1085 ACYSMCEFNGKLLASINSTVRLFEWT----NEKELRLECSHFNNIIALFLKVKGDFILVG 1140
A YS+ FNGKLLA+IN ++L++W +EL+ EC H +I+AL+++ +GDFI+VG
Sbjct: 824 AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 883
Query: 1141 DLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAAT 1200
DLM+S++LL YK EG+ EE +RDYN NWM+++EILDD+++LGAEN++NL +K+S
Sbjct: 884 DLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLVTVKKNSEGA 943
Query: 1201 SDEDRTHLQEVGTVHL 1216
+DE+R L+ VG HL
Sbjct: 944 TDEERGRLEVVGEYHL 959
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 376 DGSLRVVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMN 431
>gi|297799958|ref|XP_002867863.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
lyrata]
gi|297313699|gb|EFH44122.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
lyrata]
Length = 1088
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/478 (52%), Positives = 337/478 (70%), Gaps = 14/478 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD +G + +L++ E EK+ G K+ELLGE SI ++YLDN VVFVGS
Sbjct: 267 RYLLGDHSGLIHLLVITHEKEKVTGL------KIELLGETSIASSISYLDNAVVFVGSSY 320
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL+KLN PD G+YV ++E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 321 GDSQLIKLNLQPDATGSYVEILEKYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
I+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 381 IVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMNIEDELEETE 440
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C + ++QVT ++ L+S+ ++ + W+ P G +++V + N +Q
Sbjct: 441 IEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRNKWDAPAGFAVNVATANASQ 500
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ + ++ H LEYEV+CLDI+P+ + P +QLAAVGLW
Sbjct: 501 VLLATGGGHLVYLEIGDGTLTEVKHVLLEYEVSCLDINPIGDN-----PNYSQLAAVGLW 555
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ LP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F LD +SG
Sbjct: 556 TDISVRIFVLPDLTLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQLDTSSG 615
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
+L D+KKV+LGTQP L+TF S S T+VFA SDRP VIYS+N KL++SNVNL++V+HMC
Sbjct: 616 KLRDRKKVSLGTQPITLRTFSSKSATHVFAASDRPAVIYSNNKKLLYSNVNLKEVSHMCP 675
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
N+ ++PDSLA+A + T GTID+IQKLHIRT+P+GE RRI +QE ++TF + R
Sbjct: 676 FNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPIGEHARRICHQEQTRTFAICCLR 733
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/301 (45%), Positives = 208/301 (69%), Gaps = 18/301 (5%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T +LNL+VAK+ RIEIH ++P+GL+ + ++ LYG+IA ++ FR + +D LF+ T+R
Sbjct: 25 TSPQELNLIVAKSTRIEIHLLSPQGLQTILDVPLYGRIATLELFRPHGEAQDFLFVATER 84
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y +L+ D ++ E++T+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+I
Sbjct: 85 YKFCVLQW--DYESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVI 142
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEF 862
P + +A +IR+EEL++ D++FL+GC PTI ++QD + RHVKT+E+SLKEK+F
Sbjct: 143 PFDNKGQLKEAFNIRLEELQVLDIKFLYGCTKPTIAVLYQDNKDARHVKTYEVSLKEKDF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
+ PW Q+N++ A L+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y
Sbjct: 203 VEGPWSQNNLDNGADLLIPVPSPLCGVLIIGEETIVYCSANAFKAIP---IRPSITKAYG 259
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSY 981
+VD +G RYLLGD +G + +L++ E EK+ G K+ELLGE SS+SY
Sbjct: 260 RVDLDGSRYLLGDHSGLIHLLVITHEKEKVTGL------KIELLGETSIA-----SSISY 308
Query: 982 I 982
+
Sbjct: 309 L 309
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/228 (47%), Positives = 161/228 (70%), Gaps = 6/228 (2%)
Query: 993 NQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVV 1052
NQP+ E E+H + ++D +FE L + L EY S++S F +D N Y+ +GTA V
Sbjct: 734 NQPS--AEESEMHFVRLLDAQSFEFLSTYPLDAFEYGCSILSCSFTDDKNVYYCVGTAYV 791
Query: 1053 HPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT-- 1110
PEENEP +GRI++F ++G+LQ I EKE KGA YS+ FNGKLLA+IN ++L++W
Sbjct: 792 LPEENEPTKGRILVFIVEEGRLQLITEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 851
Query: 1111 --NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPN 1168
+EL+ EC H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN N
Sbjct: 852 DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 911
Query: 1169 WMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
WM ++EILDD+++LGA+N +NLF +K++ +DE+R ++ VG H+
Sbjct: 912 WMAAVEILDDDIYLGADNCFNLFTVKKNNEGATDEERARMEVVGEYHI 959
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 47/62 (75%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS +LNL+VAK+ RIEIH ++P+GL+ + ++ LYG+IA ++ FR + +D LF+ T
Sbjct: 23 NFTSPQELNLIVAKSTRIEIHLLSPQGLQTILDVPLYGRIATLELFRPHGEAQDFLFVAT 82
Query: 685 QR 686
+R
Sbjct: 83 ER 84
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 376 DGSLRIVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMN 431
>gi|2911067|emb|CAA17529.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
gi|7268907|emb|CAB79110.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
Length = 1102
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/478 (52%), Positives = 337/478 (70%), Gaps = 14/478 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD AG + +L++ E EK+ G K+ELLGE SI ++YLDN VVFVGS
Sbjct: 281 RYLLGDHAGLIHLLVITHEKEKVTGL------KIELLGETSIASSISYLDNAVVFVGSSY 334
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL+KLN PD G+YV ++E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 335 GDSQLIKLNLQPDAKGSYVEILEKYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 394
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
I+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 395 IVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMNIEDELEETE 454
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S+ QT +C + ++QVT ++ L+S+ ++ + W+ P G S++V + N +Q
Sbjct: 455 IEGFLSEVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRNKWDAPAGFSVNVATANASQ 514
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ + ++ H LEYEV+CLDI+P+ + P +QLAAVG+W
Sbjct: 515 VLLATGGGHLVYLEIGDGTLTEVKHVLLEYEVSCLDINPIGDN-----PNYSQLAAVGMW 569
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ LP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F LD + G
Sbjct: 570 TDISVRIFVLPDLTLITKEELGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQLDTSCG 629
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
+L D+KKV+LGT+P L+TF S S T+VFA SDRP VIYS+N KL++SNVNL++V+HMC
Sbjct: 630 KLRDRKKVSLGTRPITLRTFSSKSATHVFAASDRPAVIYSNNKKLLYSNVNLKEVSHMCP 689
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
N+ ++PDSLA+A + T GTID+IQKLHIRT+P+GE RRI +QE ++TF + R
Sbjct: 690 FNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPIGEHARRICHQEQTRTFAISCLR 747
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/313 (43%), Positives = 198/313 (63%), Gaps = 28/313 (8%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLL------ 737
T +LNL+VAK+ RIEIH ++P+GL+ + ++ LYG+IA M+ FR LL
Sbjct: 25 TSPQELNLIVAKSTRIEIHLLSPQGLQTILDVPLYGRIATMELFRPHVSIVFLLNTFLCL 84
Query: 738 ------FIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVI 791
F + Q + + G + L +L A G+VSDRIG+P++NG I IIDP+ RVI
Sbjct: 85 RVKHKTFCLLQLKDINSVFFNGIMSPLSLLQGAMGDVSDRIGRPTDNGQIGIIDPDCRVI 144
Query: 792 GLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHV 850
GL LY+GLFK+IP + +A +IR+EEL++ D++FL+GC PTI ++QD + RHV
Sbjct: 145 GLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCTKPTIAVLYQDNKDARHV 204
Query: 851 KTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAP 910
KT+E+SLK+K F + PW Q+N++ A L+IPVP PL G +IIG+E+I+Y S ++ A+
Sbjct: 205 KTYEVSLKDKNFVEGPWSQNNLDNGADLLIPVPSPLCGVLIIGEETIVYCSANAFKAIP- 263
Query: 911 QIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHC 969
I+ S Y +VD +G RYLLGD AG + +L++ E EK+ G K+ELLGE
Sbjct: 264 --IRPSITKAYGRVDLDGSRYLLGDHAGLIHLLVITHEKEKVTGL------KIELLGETS 315
Query: 970 KGPVVEMSSLSYI 982
SS+SY+
Sbjct: 316 IA-----SSISYL 323
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 155/220 (70%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E E H + ++D +FE L ++ L E S++S F +D N Y+ +GTA V PEENEP
Sbjct: 754 ESESHFVRLLDAQSFEFLSSYPLDAFECGCSILSCSFTDDKNVYYCVGTAYVLPEENEPT 813
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELR 1116
+GRI++F ++G+LQ I EKE KGA YS+ FNGKLLASIN ++L++W +EL+
Sbjct: 814 KGRILVFIVEEGRLQLITEKETKGAVYSLNAFNGKLLASINQKIQLYKWMLRDDGTRELQ 873
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+AL+++ +GDFI VGDLM+S++LL YK EG+ EE +RDYN NWMT++EIL
Sbjct: 874 SECGHHGHILALYVQTRGDFIAVGDLMKSISLLIYKHEEGAIEERARDYNANWMTAVEIL 933
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+D+++LG +N +N+F +K++ +DE+R ++ VG H+
Sbjct: 934 NDDIYLGTDNCFNIFTVKKNNEGATDEERARMEVVGEYHI 973
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 390 DGSLRIVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMN 445
>gi|15233515|ref|NP_193842.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
gi|73620956|sp|O49552.2|DDB1B_ARATH RecName: Full=DNA damage-binding protein 1b; AltName:
Full=UV-damaged DNA-binding protein 1b; Short=DDB1b
gi|110739453|dbj|BAF01636.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
gi|332659001|gb|AEE84401.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
Length = 1088
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/478 (52%), Positives = 337/478 (70%), Gaps = 14/478 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD AG + +L++ E EK+ G K+ELLGE SI ++YLDN VVFVGS
Sbjct: 267 RYLLGDHAGLIHLLVITHEKEKVTGL------KIELLGETSIASSISYLDNAVVFVGSSY 320
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL+KLN PD G+YV ++E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 321 GDSQLIKLNLQPDAKGSYVEILEKYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
I+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 381 IVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMNIEDELEETE 440
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S+ QT +C + ++QVT ++ L+S+ ++ + W+ P G S++V + N +Q
Sbjct: 441 IEGFLSEVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRNKWDAPAGFSVNVATANASQ 500
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ + ++ H LEYEV+CLDI+P+ + P +QLAAVG+W
Sbjct: 501 VLLATGGGHLVYLEIGDGTLTEVKHVLLEYEVSCLDINPIGDN-----PNYSQLAAVGMW 555
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ LP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F LD + G
Sbjct: 556 TDISVRIFVLPDLTLITKEELGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQLDTSCG 615
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
+L D+KKV+LGT+P L+TF S S T+VFA SDRP VIYS+N KL++SNVNL++V+HMC
Sbjct: 616 KLRDRKKVSLGTRPITLRTFSSKSATHVFAASDRPAVIYSNNKKLLYSNVNLKEVSHMCP 675
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
N+ ++PDSLA+A + T GTID+IQKLHIRT+P+GE RRI +QE ++TF + R
Sbjct: 676 FNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPIGEHARRICHQEQTRTFAISCLR 733
Score = 270 bits (690), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 139/301 (46%), Positives = 207/301 (68%), Gaps = 18/301 (5%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T +LNL+VAK+ RIEIH ++P+GL+ + ++ LYG+IA M+ FR + +D LF+ T+R
Sbjct: 25 TSPQELNLIVAKSTRIEIHLLSPQGLQTILDVPLYGRIATMELFRPHGEAQDFLFVATER 84
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y +L+ D ++ E++T+A G+VSDRIG+P++NG I IIDP+ RVIGL LY+GLFK+I
Sbjct: 85 YKFCVLQW--DYESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRVIGLHLYDGLFKVI 142
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEF 862
P + +A +IR+EEL++ D++FL+GC PTI ++QD + RHVKT+E+SLK+K F
Sbjct: 143 PFDNKGQLKEAFNIRLEELQVLDIKFLYGCTKPTIAVLYQDNKDARHVKTYEVSLKDKNF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
+ PW Q+N++ A L+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y
Sbjct: 203 VEGPWSQNNLDNGADLLIPVPSPLCGVLIIGEETIVYCSANAFKAIP---IRPSITKAYG 259
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSY 981
+VD +G RYLLGD AG + +L++ E EK+ G K+ELLGE SS+SY
Sbjct: 260 RVDLDGSRYLLGDHAGLIHLLVITHEKEKVTGL------KIELLGETSIA-----SSISY 308
Query: 982 I 982
+
Sbjct: 309 L 309
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 159/228 (69%), Gaps = 6/228 (2%)
Query: 993 NQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVV 1052
N+P+ E E H + ++D +FE L ++ L E S++S F +D N Y+ +GTA V
Sbjct: 734 NEPS--AEESESHFVRLLDAQSFEFLSSYPLDAFECGCSILSCSFTDDKNVYYCVGTAYV 791
Query: 1053 HPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT-- 1110
PEENEP +GRI++F ++G+LQ I EKE KGA YS+ FNGKLLASIN ++L++W
Sbjct: 792 LPEENEPTKGRILVFIVEEGRLQLITEKETKGAVYSLNAFNGKLLASINQKIQLYKWMLR 851
Query: 1111 --NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPN 1168
+EL+ EC H +I+AL+++ +GDFI VGDLM+S++LL YK EG+ EE +RDYN N
Sbjct: 852 DDGTRELQSECGHHGHILALYVQTRGDFIAVGDLMKSISLLIYKHEEGAIEERARDYNAN 911
Query: 1169 WMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
WMT++EIL+D+++LG +N +N+F +K++ +DE+R ++ VG H+
Sbjct: 912 WMTAVEILNDDIYLGTDNCFNIFTVKKNNEGATDEERARMEVVGEYHI 959
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS +LNL+VAK+ RIEIH ++P+GL+ + ++ LYG+IA M+ FR + +D LF+ T
Sbjct: 23 NFTSPQELNLIVAKSTRIEIHLLSPQGLQTILDVPLYGRIATMELFRPHGEAQDFLFVAT 82
Query: 685 QR 686
+R
Sbjct: 83 ER 84
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 376 DGSLRIVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMN 431
>gi|224061051|ref|XP_002300334.1| predicted protein [Populus trichocarpa]
gi|222847592|gb|EEE85139.1| predicted protein [Populus trichocarpa]
Length = 1088
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/478 (53%), Positives = 334/478 (69%), Gaps = 14/478 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD AG L +L++ E EK+ G K+ELLGE SI ++YLDN VF+GS
Sbjct: 267 RYLLGDHAGLLHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAFVFIGSSY 320
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLVKLN PD GTYV V++ + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 321 GDSQLVKLNLHPDAKGTYVEVLDRYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
I+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 381 IVRNGIGINEQASVELQGIKGMWSLRSLTDDPFDTFLVVSFISETRILAMNIEDELEETE 440
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C ++QVT S+ L+S+ ++ W P+G SI+V + N Q
Sbjct: 441 IEGFCSQVQTLFCHCAVFNQLVQVTSSSVRLVSSTTRELRQEWNAPSGYSINVATANATQ 500
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ + Q H LE E++CLDI+P+ P +QLAAVG+W
Sbjct: 501 VLLATGGGHLVYLEIGDGTLTQAKHAQLECEISCLDINPIG-----ENPNYSQLAAVGMW 555
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KEPLGGEIIPRS+L+ FEG YLL ALGDG + F L+ ++G
Sbjct: 556 TDISVRIFSLPDLNLITKEPLGGEIIPRSVLLCSFEGIAYLLCALGDGHLLNFLLNLSTG 615
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
L D+KKV+LGTQP L+TF S +TT+VFA SDRPTVIYSSN KL++SNVNL++V+HMC
Sbjct: 616 GLKDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 675
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
N+ ++PDSLA+A + + GTID+IQKLHIR++PLGE RRI +QE S+TF + + +
Sbjct: 676 FNSAAFPDSLAIAKEGELSIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFSICSMK 733
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/306 (44%), Positives = 208/306 (67%), Gaps = 13/306 (4%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T +LNL++AK RIEI+ +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T+R
Sbjct: 25 TSSQELNLIIAKCTRIEINLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATER 84
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y +L+ D + E++T+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+I
Sbjct: 85 YKFCVLQW--DAETSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVI 142
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEF 862
P + +A +IR+EEL++ D++FLHGC PTI+ ++QD + RHVKT+E++LK+K+F
Sbjct: 143 PFDNKGQLKEAFNIRLEELQVLDIKFLHGCSKPTIVVLYQDNKDARHVKTYEVALKDKDF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
+ PW Q+N++ A L+IPVP P G +IIG+E+I+Y S + A+ I+ S Y
Sbjct: 203 IEGPWSQNNLDNGADLLIPVPPPFCGVLIIGEETIVYCSANVFRAIP---IRPSITKAYG 259
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSY 981
+VDA+G RYLLGD AG L +L++ E EK+ G K+ELLGE + ++
Sbjct: 260 RVDADGSRYLLGDHAGLLHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAF 313
Query: 982 IKPGST 987
+ GS+
Sbjct: 314 VFIGSS 319
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 172/256 (67%), Gaps = 11/256 (4%)
Query: 965 LGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLF 1024
LGEH + + S ++ QS A E E+H + ++D TFE + + L
Sbjct: 711 LGEHARRICHQEQSRTFSICSMKNQSNAE-------ESEMHFIRLLDDQTFEFISTYPLD 763
Query: 1025 PGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKG 1084
EY S++S F +D N Y+ +GTA V PEENEP +GRI++F +DGKLQ IAEKE KG
Sbjct: 764 TFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKG 823
Query: 1085 ACYSMCEFNGKLLASINSTVRLFEWT----NEKELRLECSHFNNIIALFLKVKGDFILVG 1140
A YS+ FNGKLLA+IN ++L++W +EL+ EC H +I+AL+++ +GDFI+VG
Sbjct: 824 AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 883
Query: 1141 DLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAAT 1200
DLM+S++LL YK EG+ EE +RDYN NWM+++EILDD+++LGAEN++NLF +K+S
Sbjct: 884 DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 943
Query: 1201 SDEDRTHLQEVGTVHL 1216
+DE+R L+ VG HL
Sbjct: 944 TDEERGRLEVVGEYHL 959
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 376 DGSLRIVRNGIGINEQASVELQGIKGMWSLRSLTDDPFDTFLVVSFISETRILAMN 431
>gi|115465791|ref|NP_001056495.1| Os05g0592400 [Oryza sativa Japonica Group]
gi|48475231|gb|AAT44300.1| putative DNA damage binding protein 1 [Oryza sativa Japonica Group]
gi|113580046|dbj|BAF18409.1| Os05g0592400 [Oryza sativa Japonica Group]
gi|215694552|dbj|BAG89545.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632766|gb|EEE64898.1| hypothetical protein OsJ_19757 [Oryza sativa Japonica Group]
Length = 1090
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/473 (53%), Positives = 332/473 (70%), Gaps = 14/473 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD AG L +L+L E E++ G K+E LGE SI ++YLDNGVV+VGSR
Sbjct: 268 RYLLGDNAGILHLLVLTHERERVTGL------KIEYLGETSIASSISYLDNGVVYVGSRF 321
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLVKLN D NG+YV V+E + NL PI+D VVDL+RQGQGQ+VTCSG FK+GSLR
Sbjct: 322 GDSQLVKLNLQADPNGSYVEVLERYVNLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLR 381
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
++RNGIGI E A ++L GIKG+W+L D LV+SF+ TR L ++ E+EETE
Sbjct: 382 VVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVVSFISETRFLAMNMEDELEETE 441
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF + QT +C N ++QVT ++ L+S S+ V W P G S++V S N +Q
Sbjct: 442 IEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSRELVDQWNAPEGFSVNVASANASQ 501
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ S++ ++ H LE+E++C+D++P+ P + LAAVG+W
Sbjct: 502 VLLATGGGHLVYLEIKDSKLVEVKHIQLEHEISCVDLNPIG-----ENPQYSSLAAVGMW 556
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+LSLP LE + KE LGGEI+PRS+L+ EG YLL ALGDG +F F L+ ++G
Sbjct: 557 TDISVRILSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCALGDGHLFSFLLNASTG 616
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
LTD+KKV+LGTQP L+TF S TT+VFA SDRPTVIYSSN KL++SNVNL++VNHMC
Sbjct: 617 ELTDRKKVSLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCP 676
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFG 550
N + PDSLA+A + + GTID+IQKLHIRT+PL E RRI +QE S+T
Sbjct: 677 FNTAAIPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRICHQEQSRTLA 729
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/299 (47%), Positives = 206/299 (68%), Gaps = 17/299 (5%)
Query: 689 LNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMI 748
LNL+VAK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T+RY +
Sbjct: 30 LNLIVAKCTRIEIHLLTPQGLQPMIDVPIYGRIATLELFRPHNETQDFLFIATERYKFCV 89
Query: 749 LECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
L+ G+ E+LT+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+IP +
Sbjct: 90 LQWDGE--KSELLTRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNK 147
Query: 809 NFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEFTKTPW 867
+A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E++LK+K+F + PW
Sbjct: 148 GQLKEAFNIRLEELQVLDIKFLYGCVKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPW 207
Query: 868 KQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDAN 927
Q+N++ A L+IPVP PLGG IIIG+E+I+Y + S P IK S I Y +VD +
Sbjct: 208 SQNNLDNGAGLLIPVPAPLGGVIIIGEETIVYCNANSTFRAIP--IKQSIIRAYGRVDPD 265
Query: 928 GERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
G RYLLGD AG L +L+L E E++ G K+E LGE SS+SY+ G
Sbjct: 266 GSRYLLGDNAGILHLLVLTHERERVTGL------KIEYLGETSIA-----SSISYLDNG 313
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 158/220 (71%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E E H + ++D TFE L +QL E+ S+IS F +D N Y+ +GTA V PEENEP
Sbjct: 742 ESETHFVRLLDHQTFEFLSIYQLDQYEHGCSIISCSFSDDNNVYYCVGTAYVLPEENEPS 801
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELR 1116
+GRI++F +DG+LQ I EKE KGA YS+ FNGKLLA+IN ++L++W EL+
Sbjct: 802 KGRILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQ 861
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+AL+ + +GDFI+VGDLM+S++LL YK E + EE++RDYN NWM+++E+L
Sbjct: 862 SECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEML 921
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DDE+++GAEN+YN+F +K+S A +DE+R L+ VG HL
Sbjct: 922 DDEIYIGAENNYNIFTVRKNSDAATDEERGRLEVVGEYHL 961
Score = 60.1 bits (144), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNGIGI E A ++L GIKG+W+L D LV+SF+ TR L ++
Sbjct: 377 DGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVVSFISETRFLAMN 432
>gi|242089089|ref|XP_002440377.1| hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor]
gi|241945662|gb|EES18807.1| hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor]
Length = 1783
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 251/473 (53%), Positives = 332/473 (70%), Gaps = 14/473 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD G L +L+L E E++ G K+E LGE SI ++YLDNGVV+VGSR
Sbjct: 268 RYLLGDNTGILHLLVLTHERERVTGL------KIEYLGETSIASSISYLDNGVVYVGSRF 321
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLVKLN D +G++V ++E + NL PI+D VVDL+RQGQGQ+VTCSG FK+GSLR
Sbjct: 322 GDSQLVKLNLQADASGSFVEILERYVNLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLR 381
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
++RNGIGI E A ++L GIKG+W+L D LV+SF+ TR L ++ E+EETE
Sbjct: 382 VVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVVSFISETRFLAMNMEDELEETE 441
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF + QT +C N ++QVT ++ L+S S+ V W P G S++V S N +Q
Sbjct: 442 IEGFDAQTQTLFCQNATNDLLIQVTANSVRLVSCTSRELVDQWNAPAGFSVNVASANASQ 501
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ S++ ++ H LE+E++CLD++P+ P + LAAVG+W
Sbjct: 502 VLLATGGGHLVYLEIRDSKLVEVKHAQLEHEISCLDLNPIG-----ENPQYSSLAAVGMW 556
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP LE + KE LGGEI+PRS+L+ EG YLL ALGDG++F F L+ ++G
Sbjct: 557 TDISVRIFSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCALGDGNLFSFLLNASTG 616
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
LTD+KKVTLGTQP L+TF S TT+VFA SDRPTVIYSSN KL++SNVNL++VNHMC
Sbjct: 617 ELTDRKKVTLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCP 676
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFG 550
N ++PDSLA+A + + GTID+IQKLHIRT+PL E RRI +QE S+T
Sbjct: 677 FNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRICHQEQSKTLA 729
Score = 275 bits (704), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 142/304 (46%), Positives = 205/304 (67%), Gaps = 17/304 (5%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T LNL++AK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T+R
Sbjct: 25 TSPNQLNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATIELFRPHNETQDFLFIATER 84
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y +L+ D + E++T+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+I
Sbjct: 85 YKFCVLQW--DAEKSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVI 142
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEF 862
P + +A +IR+EEL++ D++FLHGC PTI+ ++QD + RHVKT+E++LK+K+F
Sbjct: 143 PFDNKGQLKEAFNIRLEELQVLDIKFLHGCVKPTIVVLYQDNKDVRHVKTYEVALKDKDF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
+ PW Q+N++ A L+IPVP PLGG IIIG+E I+Y + S P IK S I Y
Sbjct: 203 VEGPWSQNNVDNGAGLLIPVPAPLGGVIIIGEEQIVYCNANSTFKAIP--IKQSIIRAYG 260
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSY 981
+VD +G RYLLGD G L +L+L E E++ G K+E LGE SS+SY
Sbjct: 261 RVDPDGSRYLLGDNTGILHLLVLTHERERVTGL------KIEYLGETSIA-----SSISY 309
Query: 982 IKPG 985
+ G
Sbjct: 310 LDNG 313
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/243 (45%), Positives = 157/243 (64%), Gaps = 27/243 (11%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E E H + ++D TFE L + L E+ S+IS F +D N Y+ +GTA V PEENEP
Sbjct: 741 ESETHLIRLLDHQTFESLCVYPLDQYEFGCSIISCSFADDNNVYYCVGTAYVIPEENEPT 800
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK----ELR 1116
+GRI++F +DG LQ I EKE KGA YS+ FNGKLLA+IN ++L++W + + EL+
Sbjct: 801 KGRILVFAVEDGSLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMSREDGSHELQ 860
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK-----------------------T 1153
EC H +I+AL+ + +GDFI+VGDLM+S++LL YK
Sbjct: 861 SECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKVVPLTVCLTHIVLSVIFFVSLFVV 920
Query: 1154 MEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGT 1213
+E + EE +RDYN NWMT++E+LDDE+++GAEN YNLF +K+S A +D++R L+ VG
Sbjct: 921 LESAIEERARDYNANWMTAVEMLDDEVYVGAENGYNLFTVRKNSDAATDDERARLEVVGE 980
Query: 1214 VHL 1216
HL
Sbjct: 981 YHL 983
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNGIGI E A ++L GIKG+W+L D LV+SF+ TR L ++
Sbjct: 377 DGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVVSFISETRFLAMN 432
>gi|225443992|ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isoform 2 [Vitis vinifera]
Length = 1068
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/480 (52%), Positives = 339/480 (70%), Gaps = 14/480 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD AG L +L++ E EK+ G K+ELLGE SI ++YLDN V+VGS
Sbjct: 246 RYLLGDHAGLLHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAFVYVGSSY 299
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL+K++ PD G+YV V+E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 300 GDSQLIKIHLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 359
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
I+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 360 IVRNGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVSFISETRILAMNLEDELEETE 419
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C + ++QVT S+ L+ + S+ + W+ P+G S++V + N Q
Sbjct: 420 IEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVGSTSRELRNEWKAPSGYSVNVATANATQ 479
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ + ++ H LEY+++CLDI+P+ P +QLAAVG+W
Sbjct: 480 VLLATGGGHLVYLEIGDGTLTEVKHAQLEYDISCLDINPIG-----ENPNFSQLAAVGMW 534
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F L+ ++G
Sbjct: 535 TDISVRIFSLPDLNLITKEYLGGEIIPRSVLLCSFEGIPYLLCALGDGHLLNFLLNMSTG 594
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
LTD+KKV+LGTQP L+TF S +TT+VFA SDRPTVIYSSN KL++SNVNL++V+HMC
Sbjct: 595 ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 654
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
N+ ++PDSLA+A + T GTID+IQKLHIR++PLGE RRI +QE S+TF + + + +
Sbjct: 655 FNSAAFPDSLAIAKEGDLTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLKYN 714
Score = 235 bits (600), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 158/218 (72%), Gaps = 4/218 (1%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
E+H + ++D TFE + + L EY S++S F +D N Y+ +GTA V PEENEP +G
Sbjct: 722 EMHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG 781
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELRLE 1118
RI++F +DGKLQ IAEKE KGA YS+ FNGKLLA+IN ++L++W +EL+ E
Sbjct: 782 RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 841
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWM+++EILDD
Sbjct: 842 SGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 901
Query: 1179 ELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++LGAEN++N+F +K+S +DE+R L+ VG HL
Sbjct: 902 DIYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHL 939
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 193/302 (63%), Gaps = 34/302 (11%)
Query: 688 DLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
+LNL++AK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T+RY
Sbjct: 29 ELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFC 88
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
+L+ D +N E++T+A G+VSDRIG+P++NG ++IP +
Sbjct: 89 VLQW--DAENSEVITRAMGDVSDRIGRPTDNG---------------------QVIPFDN 125
Query: 808 DNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEFTKTP 866
+A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E++LK+K+F + P
Sbjct: 126 KGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGP 185
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDA 926
W Q+N++ A L+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y +VDA
Sbjct: 186 WAQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSASAFKAIP---IRPSITKAYGRVDA 242
Query: 927 NGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
+G RYLLGD AG L +L++ E EK+ G K+ELLGE + +++ G
Sbjct: 243 DGSRYLLGDHAGLLHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAFVYVG 296
Query: 986 ST 987
S+
Sbjct: 297 SS 298
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 46/62 (74%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFT +LNL++AK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T
Sbjct: 23 NFTGPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIAT 82
Query: 685 QR 686
+R
Sbjct: 83 ER 84
Score = 63.2 bits (152), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 355 DGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVSFISETRILAMN 410
>gi|225443990|ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
Length = 1089
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/478 (52%), Positives = 338/478 (70%), Gaps = 14/478 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD AG L +L++ E EK+ G K+ELLGE SI ++YLDN V+VGS
Sbjct: 267 RYLLGDHAGLLHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAFVYVGSSY 320
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL+K++ PD G+YV V+E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 321 GDSQLIKIHLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
I+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 381 IVRNGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVSFISETRILAMNLEDELEETE 440
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C + ++QVT S+ L+ + S+ + W+ P+G S++V + N Q
Sbjct: 441 IEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVGSTSRELRNEWKAPSGYSVNVATANATQ 500
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ + ++ H LEY+++CLDI+P+ P +QLAAVG+W
Sbjct: 501 VLLATGGGHLVYLEIGDGTLTEVKHAQLEYDISCLDINPIG-----ENPNFSQLAAVGMW 555
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F L+ ++G
Sbjct: 556 TDISVRIFSLPDLNLITKEYLGGEIIPRSVLLCSFEGIPYLLCALGDGHLLNFLLNMSTG 615
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
LTD+KKV+LGTQP L+TF S +TT+VFA SDRPTVIYSSN KL++SNVNL++V+HMC
Sbjct: 616 ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 675
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
N+ ++PDSLA+A + T GTID+IQKLHIR++PLGE RRI +QE S+TF + + +
Sbjct: 676 FNSAAFPDSLAIAKEGDLTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLK 733
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 137/302 (45%), Positives = 210/302 (69%), Gaps = 13/302 (4%)
Query: 688 DLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
+LNL++AK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T+RY
Sbjct: 29 ELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFC 88
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
+L+ D +N E++T+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+IP +
Sbjct: 89 VLQW--DAENSEVITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDN 146
Query: 808 DNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEFTKTP 866
+A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E++LK+K+F + P
Sbjct: 147 KGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGP 206
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDA 926
W Q+N++ A L+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y +VDA
Sbjct: 207 WAQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSASAFKAIP---IRPSITKAYGRVDA 263
Query: 927 NGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
+G RYLLGD AG L +L++ E EK+ G K+ELLGE + +++ G
Sbjct: 264 DGSRYLLGDHAGLLHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAFVYVG 317
Query: 986 ST 987
S+
Sbjct: 318 SS 319
Score = 235 bits (600), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 158/218 (72%), Gaps = 4/218 (1%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
E+H + ++D TFE + + L EY S++S F +D N Y+ +GTA V PEENEP +G
Sbjct: 743 EMHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG 802
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELRLE 1118
RI++F +DGKLQ IAEKE KGA YS+ FNGKLLA+IN ++L++W +EL+ E
Sbjct: 803 RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 862
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWM+++EILDD
Sbjct: 863 SGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 922
Query: 1179 ELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++LGAEN++N+F +K+S +DE+R L+ VG HL
Sbjct: 923 DIYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHL 960
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 376 DGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVSFISETRILAMN 431
>gi|356525403|ref|XP_003531314.1| PREDICTED: DNA damage-binding protein 1-like isoform 2 [Glycine
max]
Length = 1068
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 247/480 (51%), Positives = 338/480 (70%), Gaps = 14/480 (2%)
Query: 81 RYLLGDLAGRLFML-LLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD G + +L ++ ++EK+ G K+E LGE SI ++YLDN V+VGS
Sbjct: 246 RYLLGDHTGLVSLLVIIHEKEKVTGL------KIEPLGETSIASTISYLDNAFVYVGSSY 299
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL+KLN PD G+YV V+E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 300 GDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 359
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 360 VVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 419
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C + ++QVT S+ L+S+ ++ + W P+G S++V + N Q
Sbjct: 420 IEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRDLRNEWHAPSGYSVNVATANATQ 479
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ ++++ H LEYE++CLDI+P+ P + LAAVG+W
Sbjct: 480 VLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPIG-----ENPNHSNLAAVGMW 534
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F L+ ++G
Sbjct: 535 TDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFMLNTSTG 594
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
LTD+KKV+LGTQP L+TF S +TT+VFA SDRPTVIYSSN KL++SNVNL++V+HMC
Sbjct: 595 ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 654
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
N+ ++PDSLA+A + T GTID+IQKLHIR++PLGE RRI +QE S+TF + + + +
Sbjct: 655 FNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLKYN 714
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 156/218 (71%), Gaps = 4/218 (1%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
E+H + ++D TFE + + L EY +IS F +D N Y+ +GTA V PEENEP +G
Sbjct: 722 EMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDDNNVYYCVGTAYVLPEENEPTKG 781
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELRLE 1118
RII+F +DGKLQ IAEKE KGA Y + FNGKLLA+IN ++L++W EL+ E
Sbjct: 782 RIIVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSE 841
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
C H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWM+++EI+DD
Sbjct: 842 CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDD 901
Query: 1179 ELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++LGAENS+NLF +K+S +DE+R L+ VG HL
Sbjct: 902 DIYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHL 939
Score = 221 bits (564), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/306 (38%), Positives = 191/306 (62%), Gaps = 34/306 (11%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL++AK RIEIH ++P+GL+P+ ++ +YG+IA ++ FR + +D LFI T+R
Sbjct: 25 TSPQDLNLIIAKCTRIEIHLLSPQGLQPMLDVPIYGRIATLELFRPHGEAQDYLFIATER 84
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y +L+ D + E++T+A G+VSDRIG+P++NG ++I
Sbjct: 85 YKFCVLQW--DSETGELVTRAMGDVSDRIGRPTDNG---------------------QVI 121
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEF 862
P + +A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E++LK+K+F
Sbjct: 122 PFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVLYQDNKDARHVKTYEVALKDKDF 181
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
+ PW Q+N++ A L+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y
Sbjct: 182 VEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIP---IRPSITKAYG 238
Query: 923 KVDANGERYLLGDLAGRLFML-LLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSY 981
+VD +G RYLLGD G + +L ++ ++EK+ G K+E LGE + ++
Sbjct: 239 RVDPDGSRYLLGDHTGLVSLLVIIHEKEKVTGL------KIEPLGETSIASTISYLDNAF 292
Query: 982 IKPGST 987
+ GS+
Sbjct: 293 VYVGSS 298
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS DLNL++AK RIEIH ++P+GL+P+ ++ +YG+IA ++ FR + +D LFI T
Sbjct: 23 NFTSPQDLNLIIAKCTRIEIHLLSPQGLQPMLDVPIYGRIATLELFRPHGEAQDYLFIAT 82
Query: 685 QR 686
+R
Sbjct: 83 ER 84
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 355 DGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 410
>gi|62318656|dbj|BAD95136.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
Length = 1088
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/478 (51%), Positives = 337/478 (70%), Gaps = 14/478 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD AG + +L++ E EK+ G K+ELLGE SI ++YLDN VVFVGS
Sbjct: 267 RYLLGDHAGLIHLLVITHEKEKVTGL------KIELLGETSIASSISYLDNAVVFVGSSY 320
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL+KLN PD G+YV ++E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 321 GDSQLIKLNLQPDAKGSYVEILEKYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
I+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 381 IVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMNIEDELEETE 440
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S+ QT +C + ++QVT ++ L+S+ ++ + W+ P G S++V + N +Q
Sbjct: 441 IEGFLSEVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRNKWDAPAGFSVNVATANASQ 500
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ + ++ H LEYEV+CLDI+P+ + P +QLAAVG+W
Sbjct: 501 VLLATGGGHLVYLEIGDGTLTEVKHVLLEYEVSCLDINPIGDN-----PNYSQLAAVGMW 555
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ LP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F LD + G
Sbjct: 556 TDISVRIFVLPDLTLITKEELGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQLDTSCG 615
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
+L D+KKV+LGT+P L+TF S S T+VFA SDRP VIYS+N KL++SNV+L++V+HMC
Sbjct: 616 KLRDRKKVSLGTRPITLRTFSSKSATHVFAASDRPAVIYSNNKKLLYSNVSLKEVSHMCP 675
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
N+ ++PDSLA+A + T GTID+IQKLHIRT+P+GE RRI +QE ++TF + R
Sbjct: 676 FNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPIGEHARRICHQEQTRTFAISCLR 733
Score = 270 bits (690), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 139/301 (46%), Positives = 207/301 (68%), Gaps = 18/301 (5%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T +LNL+VAK+ RIEIH ++P+GL+ + ++ LYG+IA M+ FR + +D LF+ T+R
Sbjct: 25 TSPQELNLIVAKSTRIEIHLLSPQGLQTILDVPLYGRIATMELFRPHGEAQDFLFVATER 84
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y +L+ D ++ E++T+A G+VSDRIG+P++NG I IIDP+ RVIGL LY+GLFK+I
Sbjct: 85 YKFCVLQW--DYESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRVIGLHLYDGLFKVI 142
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEF 862
P + +A +IR+EEL++ D++FL+GC PTI ++QD + RHVKT+E+SLK+K F
Sbjct: 143 PFDNKGQLKEAFNIRLEELQVLDIKFLYGCTKPTIAVLYQDNKDARHVKTYEVSLKDKNF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
+ PW Q+N++ A L+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y
Sbjct: 203 VEGPWSQNNLDNGADLLIPVPSPLCGVLIIGEETIVYCSANAFKAIP---IRPSITKAYG 259
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSY 981
+VD +G RYLLGD AG + +L++ E EK+ G K+ELLGE SS+SY
Sbjct: 260 RVDLDGSRYLLGDHAGLIHLLVITHEKEKVTGL------KIELLGETSIA-----SSISY 308
Query: 982 I 982
+
Sbjct: 309 L 309
Score = 223 bits (568), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 104/228 (45%), Positives = 158/228 (69%), Gaps = 6/228 (2%)
Query: 993 NQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVV 1052
N+P+ E E H + ++D +FE L ++ L E S++S F +D N Y+ +GTA V
Sbjct: 734 NEPS--AEESESHFVRLLDAQSFEFLSSYPLDAFECGCSILSCSFTDDKNVYYCVGTAYV 791
Query: 1053 HPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT-- 1110
PEENEP +GRI++F ++G+LQ I EKE KGA YS+ FNGKLLASIN ++L++W
Sbjct: 792 LPEENEPTKGRILVFIVEEGRLQLITEKETKGAVYSLNAFNGKLLASINQKIQLYKWMLR 851
Query: 1111 --NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPN 1168
+EL+ EC H +I+AL+++ +GDFI VGDLM+S++LL YK EG+ EE +RDYN N
Sbjct: 852 DDGTRELQSECGHHGHILALYVQTRGDFIAVGDLMKSISLLIYKHEEGAIEERARDYNAN 911
Query: 1169 WMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
WM ++EIL+D+++LG +N +N+F +K++ +DE+R ++ VG H+
Sbjct: 912 WMAAVEILNDDIYLGTDNCFNIFTVKKNNEGATDEERARMEVVGEYHI 959
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS +LNL+VAK+ RIEIH ++P+GL+ + ++ LYG+IA M+ FR + +D LF+ T
Sbjct: 23 NFTSPQELNLIVAKSTRIEIHLLSPQGLQTILDVPLYGRIATMELFRPHGEAQDFLFVAT 82
Query: 685 QR 686
+R
Sbjct: 83 ER 84
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 376 DGSLRIVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMN 431
>gi|413946716|gb|AFW79365.1| hypothetical protein ZEAMMB73_562969 [Zea mays]
Length = 1089
Score = 488 bits (1255), Expect = e-134, Method: Compositional matrix adjust.
Identities = 253/475 (53%), Positives = 336/475 (70%), Gaps = 18/475 (3%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD G L +L+L E E++ G K+E LGE SI ++YLDNGVV+VGSR
Sbjct: 268 RYLLGDNTGILHLLVLTHERERVTGL------KIEYLGETSIASSISYLDNGVVYVGSRF 321
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLVKLN D +G++V ++E + NL PI+D VVDL+RQGQGQ+VTCSG FK+GSLR
Sbjct: 322 GDSQLVKLNLQADASGSFVEILERYVNLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLR 381
Query: 200 IIRNGIGIEEHACIDLPGIKGIWAL--SIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEE 256
++RNGIGI E A ++L GIKG+W+L SI P D LV+SF+ TR L ++ E+EE
Sbjct: 382 VVRNGIGINEQASVELQGIKGLWSLKSSINDP--FDMYLVVSFISETRFLAMNMEDELEE 439
Query: 257 TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNK 316
TE+ GF + QT +C N ++QVT ++ L+S S+ V+ W P G S++V S N
Sbjct: 440 TEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSRELVNQWNAPAGFSVNVASANA 499
Query: 317 NQVLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVG 375
+QVL ATG + YLE+ +++ ++ H LE+E++CLD++P+ P + LAAVG
Sbjct: 500 SQVLLATGGGHLVYLEIRDAKLVEVKHAQLEHEISCLDLNPIG-----ENPQYSSLAAVG 554
Query: 376 LWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPA 435
+WTDIS R+ SLP LE + KE LGGEI+PRS+L+ EG YLL ALGDG++F F L+ +
Sbjct: 555 MWTDISVRIFSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCALGDGNLFSFLLNAS 614
Query: 436 SGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHM 495
+G LTD+KKVTLGTQP L+TF S TT+VFA SDRPTVIYSSN KL++SNVNL++VNHM
Sbjct: 615 TGELTDRKKVTLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHM 674
Query: 496 CSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFG 550
C N ++PDSLA+A + + GTID+IQKLHIRT+PL E RRI +QE S+T
Sbjct: 675 CPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRICHQEQSRTLA 729
Score = 275 bits (704), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/304 (46%), Positives = 205/304 (67%), Gaps = 17/304 (5%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T LNL++AK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T+R
Sbjct: 25 TSPNQLNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATIELFRPHNETQDFLFIATER 84
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y +L+ D + E++T+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+I
Sbjct: 85 YKFCVLQW--DAEKSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVI 142
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEF 862
P + +A +IR+EEL++ D++FLHGC PTI+ ++QD + RHVKT+E++LK+K+F
Sbjct: 143 PFDNKGQLKEAFNIRLEELQVLDIKFLHGCAKPTIVVLYQDNKDVRHVKTYEVALKDKDF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
+ PW Q+N++ A L+IPVP PLGG IIIG+E I+Y + S P IK S I Y
Sbjct: 203 VEGPWSQNNVDNGAGLLIPVPAPLGGVIIIGEEQIVYCNANSTFKAIP--IKQSIIRAYG 260
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSY 981
+VD +G RYLLGD G L +L+L E E++ G K+E LGE SS+SY
Sbjct: 261 RVDPDGSRYLLGDNTGILHLLVLTHERERVTGL------KIEYLGETSIA-----SSISY 309
Query: 982 IKPG 985
+ G
Sbjct: 310 LDNG 313
Score = 235 bits (600), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 156/220 (70%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E E H + ++D TFE L + L E S+IS F +D N Y+ +GTA V PEENEP
Sbjct: 741 ESETHLIRLLDHQTFESLCVYPLDQYECGCSIISCSFADDSNVYYCVGTAYVIPEENEPT 800
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK----ELR 1116
+GRI++F +DG LQ I EKE KGA YS+ FNGKLLA+IN ++L++W + + EL+
Sbjct: 801 KGRILVFAVEDGSLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMSREDGSHELQ 860
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+AL+ + +GDFI+VGDLM+S++LL YK E + EE +RDYN NWMT++E+L
Sbjct: 861 SECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEESAIEERARDYNANWMTAVEML 920
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DDE+++GAENSYNLF +K+S A +D++R L+ VG HL
Sbjct: 921 DDEVYVGAENSYNLFTVRKNSDAATDDERARLEVVGEYHL 960
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWAL--SIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNGIGI E A ++L GIKG+W+L SI P D LV+SF+ TR L ++
Sbjct: 377 DGSLRVVRNGIGINEQASVELQGIKGLWSLKSSINDP--FDMYLVVSFISETRFLAMN 432
>gi|195996153|ref|XP_002107945.1| hypothetical protein TRIADDRAFT_18324 [Trichoplax adhaerens]
gi|190588721|gb|EDV28743.1| hypothetical protein TRIADDRAFT_18324 [Trichoplax adhaerens]
Length = 1134
Score = 488 bits (1255), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/549 (48%), Positives = 363/549 (66%), Gaps = 26/549 (4%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD +GRLFML+L +E G VK+ +E LGE SIP C+TYLDN ++GS G
Sbjct: 268 RYLLGDYSGRLFMLILVQEHSQSG-IKVKDLCLEYLGETSIPSCITYLDNAFAYIGSSCG 326
Query: 141 DSQLVK-LNRSPD-ENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSL 198
DSQL+K LN SPD E +Y+ V+++FTNL PIIDMV VDL++QGQ QLVTCSG K SL
Sbjct: 327 DSQLIKVLNTSPDSETDSYIDVIDNFTNLGPIIDMVSVDLDKQGQSQLVTCSGFGKNASL 386
Query: 199 RIIRNGIGIEEHACIDLPGIKGIWALSI--GSPKNLDNTLVLSFVGHTRVLTLSGAEVEE 256
R++RNGIGI E A IDL I GIW L S D+ LVLSF GH+R L G EVEE
Sbjct: 387 RVLRNGIGIHELANIDLDHICGIWRLRTVSRSISEYDDVLVLSFAGHSRFLKFDGREVEE 446
Query: 257 TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNK 316
T++ GF ++T + NV ++Q++ + L + + + W+PPNGK+IS +
Sbjct: 447 TDISGFDDYKETDFAANVAFDQIVQISNESVRLAGCDGRGLLQEWKPPNGKTISKSTAGN 506
Query: 317 NQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGL 376
Q++ A+GC+++YLE+ E+KQ+++ +LE+++AC+DIS + E +AQ+ AVGL
Sbjct: 507 TQIMVASGCELFYLEIGEGELKQVSNISLEHDIACIDISLKDDNE------RAQICAVGL 560
Query: 377 WTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPAS 436
W D+SARLL LP+L+ + E LGG+IIPRSI++ F+ YLLVA+GDG++ Y+ ++ +
Sbjct: 561 WVDMSARLLLLPNLQLMLTESLGGDIIPRSIMLNRFDNEIYLLVAMGDGTLAYYLVNTTT 620
Query: 437 GRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMC 496
LT++K V LG + L TF+S S +NVFACSDRPTVIY +NHKLVFSNVNL++VN M
Sbjct: 621 CSLTNRKSVNLGVVHSNLYTFKSGSISNVFACSDRPTVIYINNHKLVFSNVNLKKVNFMS 680
Query: 497 SLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRI 556
++ES+P+SLAL DS F GTIDEIQKLHIRT PLGE R QE SQ+FG+IT R
Sbjct: 681 PFHSESFPNSLALVNDSGFIIGTIDEIQKLHIRTKPLGETTR----QEESQSFGIITCRT 736
Query: 557 DIQEADGS--TPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNL 614
++ D P SAS N T + P + S++ +D E + ++
Sbjct: 737 EVPSEDDKNFVPTHQSASLLVSNRT---------MCPEQSDNSSSTFDSDTLSEKNIDSV 787
Query: 615 LIIDQNTFE 623
LIIDQ++ +
Sbjct: 788 LIIDQHSLD 796
Score = 253 bits (647), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/281 (44%), Positives = 190/281 (67%), Gaps = 5/281 (1%)
Query: 688 DLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
DLNL+VAKNNR++I VT EGL P+ ++ +YG+IA M+ R + DLLFI+T RY
Sbjct: 28 DLNLIVAKNNRLDIQLVTAEGLVPLLDVGVYGRIASMQLIRPENENCDLLFILTCRYRVC 87
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
IL+ + + + I+T+A+G++ +R+ +PSE G+I I+DP+ +VI L+LY+G K+IPLE
Sbjct: 88 ILQYKPETKS--IITRAYGDMKNRVSRPSETGLIGIVDPDCKVICLKLYDGWLKLIPLEL 145
Query: 808 D-NFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTP 866
D + E+ A +R+EEL++ DV+FL+G PTI I++ R++KT+EISL+ + + P
Sbjct: 146 DTDKEMSAEDVRLEELQVLDVKFLYGFTEPTIALIYESGQNRYLKTYEISLQNADIHRQP 205
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDA 926
W +E EA +++PVP P G ++IG SI Y+ G+ + + P +K I C+ +VD+
Sbjct: 206 WNIGKVEEEAFMILPVPPPSCGMVVIGAGSISYYKGQDSLHITPASLKDR-ITCFGRVDS 264
Query: 927 NGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
NG RYLLGD +GRLFML+L +E G VK+ +E LGE
Sbjct: 265 NGCRYLLGDYSGRLFMLILVQEHSQSG-IKVKDLCLEYLGE 304
Score = 233 bits (593), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 161/233 (69%), Gaps = 1/233 (0%)
Query: 984 PGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT 1043
P + S++ +D E + ++LIIDQ++ + A QL E+ +SLIS F DP
Sbjct: 764 PEQSDNSSSTFDSDTLSEKNIDSVLIIDQHSLDAQCALQLQDCEWGMSLISCTFENDPEA 823
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINST 1103
Y+ +GTA V+ E+ EP +G I I Y +GK+QQ+ KE+ GA Y M FNG+LLAS+NST
Sbjct: 824 YYCVGTAFVNLEDKEPTKGNIRILKYFEGKIQQVHSKEVSGAVYCMVAFNGRLLASVNST 883
Query: 1104 VRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISR 1163
V ++EWT+ KEL E S NN++AL+LK KGDFIL+GDLMRS++L Y+ M E I +
Sbjct: 884 VSVYEWTSNKELVEETSFHNNVLALYLKTKGDFILIGDLMRSISLCAYRPMNNEIELICK 943
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+ +PNWMT++EI+DD+ +LG ENS+NLF CQK+S++ S+E++ HL VG H+
Sbjct: 944 NNDPNWMTAVEIIDDDSYLGGENSHNLFTCQKNSSS-SEEEQKHLPTVGVYHV 995
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 2 GSLRIIRNGIGIEEHACIDLPGIKGIWALSI--GSPKNLDNTLVLSFVGHTRVLTLSGAE 59
SLR++RNGIGI E A IDL I GIW L S D+ LVLSF GH+R L G E
Sbjct: 384 ASLRVLRNGIGIHELANIDLDHICGIWRLRTVSRSISEYDDVLVLSFAGHSRFLKFDGRE 443
Query: 60 WGFHLLRGF 68
+ GF
Sbjct: 444 VEETDISGF 452
>gi|297740793|emb|CBI30975.3| unnamed protein product [Vitis vinifera]
Length = 1043
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/480 (52%), Positives = 339/480 (70%), Gaps = 14/480 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD AG L +L++ E EK+ G K+ELLGE SI ++YLDN V+VGS
Sbjct: 267 RYLLGDHAGLLHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAFVYVGSSY 320
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL+K++ PD G+YV V+E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 321 GDSQLIKIHLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
I+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 381 IVRNGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVSFISETRILAMNLEDELEETE 440
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C + ++QVT S+ L+ + S+ + W+ P+G S++V + N Q
Sbjct: 441 IEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVGSTSRELRNEWKAPSGYSVNVATANATQ 500
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ + ++ H LEY+++CLDI+P+ P +QLAAVG+W
Sbjct: 501 VLLATGGGHLVYLEIGDGTLTEVKHAQLEYDISCLDINPIG-----ENPNFSQLAAVGMW 555
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F L+ ++G
Sbjct: 556 TDISVRIFSLPDLNLITKEYLGGEIIPRSVLLCSFEGIPYLLCALGDGHLLNFLLNMSTG 615
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
LTD+KKV+LGTQP L+TF S +TT+VFA SDRPTVIYSSN KL++SNVNL++V+HMC
Sbjct: 616 ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 675
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
N+ ++PDSLA+A + T GTID+IQKLHIR++PLGE RRI +QE S+TF + + + +
Sbjct: 676 FNSAAFPDSLAIAKEGDLTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLKYN 735
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 137/302 (45%), Positives = 210/302 (69%), Gaps = 13/302 (4%)
Query: 688 DLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
+LNL++AK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T+RY
Sbjct: 29 ELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFC 88
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
+L+ D +N E++T+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+IP +
Sbjct: 89 VLQW--DAENSEVITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDN 146
Query: 808 DNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEFTKTP 866
+A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E++LK+K+F + P
Sbjct: 147 KGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGP 206
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDA 926
W Q+N++ A L+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y +VDA
Sbjct: 207 WAQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSASAFKAIP---IRPSITKAYGRVDA 263
Query: 927 NGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
+G RYLLGD AG L +L++ E EK+ G K+ELLGE + +++ G
Sbjct: 264 DGSRYLLGDHAGLLHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAFVYVG 317
Query: 986 ST 987
S+
Sbjct: 318 SS 319
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 158/218 (72%), Gaps = 4/218 (1%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
E+H + ++D TFE + + L EY S++S F +D N Y+ +GTA V PEENEP +G
Sbjct: 743 EMHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG 802
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELRLE 1118
RI++F +DGKLQ IAEKE KGA YS+ FNGKLLA+IN ++L++W +EL+ E
Sbjct: 803 RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 862
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWM+++EILDD
Sbjct: 863 SGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 922
Query: 1179 ELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++LGAEN++N+F +K+S +DE+R L+ VG HL
Sbjct: 923 DIYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHL 960
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 376 DGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVSFISETRILAMN 431
>gi|356525401|ref|XP_003531313.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Glycine
max]
Length = 1089
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/480 (51%), Positives = 338/480 (70%), Gaps = 14/480 (2%)
Query: 81 RYLLGDLAGRLFML-LLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD G + +L ++ ++EK+ G K+E LGE SI ++YLDN V+VGS
Sbjct: 267 RYLLGDHTGLVSLLVIIHEKEKVTGL------KIEPLGETSIASTISYLDNAFVYVGSSY 320
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL+KLN PD G+YV V+E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 321 GDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 381 VVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 440
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C + ++QVT S+ L+S+ ++ + W P+G S++V + N Q
Sbjct: 441 IEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRDLRNEWHAPSGYSVNVATANATQ 500
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ ++++ H LEYE++CLDI+P+ P + LAAVG+W
Sbjct: 501 VLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPIG-----ENPNHSNLAAVGMW 555
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F L+ ++G
Sbjct: 556 TDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFMLNTSTG 615
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
LTD+KKV+LGTQP L+TF S +TT+VFA SDRPTVIYSSN KL++SNVNL++V+HMC
Sbjct: 616 ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 675
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
N+ ++PDSLA+A + T GTID+IQKLHIR++PLGE RRI +QE S+TF + + + +
Sbjct: 676 FNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLKYN 735
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/306 (43%), Positives = 208/306 (67%), Gaps = 13/306 (4%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL++AK RIEIH ++P+GL+P+ ++ +YG+IA ++ FR + +D LFI T+R
Sbjct: 25 TSPQDLNLIIAKCTRIEIHLLSPQGLQPMLDVPIYGRIATLELFRPHGEAQDYLFIATER 84
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y +L+ D + E++T+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+I
Sbjct: 85 YKFCVLQW--DSETGELVTRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVI 142
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEF 862
P + +A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E++LK+K+F
Sbjct: 143 PFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVLYQDNKDARHVKTYEVALKDKDF 202
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
+ PW Q+N++ A L+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y
Sbjct: 203 VEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIP---IRPSITKAYG 259
Query: 923 KVDANGERYLLGDLAGRLFML-LLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSY 981
+VD +G RYLLGD G + +L ++ ++EK+ G K+E LGE + ++
Sbjct: 260 RVDPDGSRYLLGDHTGLVSLLVIIHEKEKVTGL------KIEPLGETSIASTISYLDNAF 313
Query: 982 IKPGST 987
+ GS+
Sbjct: 314 VYVGSS 319
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 156/218 (71%), Gaps = 4/218 (1%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
E+H + ++D TFE + + L EY +IS F +D N Y+ +GTA V PEENEP +G
Sbjct: 743 EMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDDNNVYYCVGTAYVLPEENEPTKG 802
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELRLE 1118
RII+F +DGKLQ IAEKE KGA Y + FNGKLLA+IN ++L++W EL+ E
Sbjct: 803 RIIVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSE 862
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
C H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWM+++EI+DD
Sbjct: 863 CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDD 922
Query: 1179 ELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++LGAENS+NLF +K+S +DE+R L+ VG HL
Sbjct: 923 DIYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHL 960
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS DLNL++AK RIEIH ++P+GL+P+ ++ +YG+IA ++ FR + +D LFI T
Sbjct: 23 NFTSPQDLNLIIAKCTRIEIHLLSPQGLQPMLDVPIYGRIATLELFRPHGEAQDYLFIAT 82
Query: 685 QR 686
+R
Sbjct: 83 ER 84
Score = 63.5 bits (153), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 376 DGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
>gi|350537001|ref|NP_001234275.1| DNA damage-binding protein 1 [Solanum lycopersicum]
gi|350539125|ref|NP_001233864.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
gi|55976440|sp|Q6QNU4.1|DDB1_SOLLC RecName: Full=DNA damage-binding protein 1; AltName: Full=High
pigmentation protein 1; AltName: Full=UV-damaged
DNA-binding protein 1
gi|38455768|gb|AAR20885.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
gi|42602165|gb|AAS21683.1| UV-damaged DNA binding protein 1 [Solanum lycopersicum]
Length = 1090
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/485 (51%), Positives = 335/485 (69%), Gaps = 14/485 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD G L +L++ E EK+ G K+ELLGE SI ++YLDN VF+GS
Sbjct: 267 RYLLGDHNGLLHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAFVFIGSSY 320
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLVKLN PD G+YV V+E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 321 GDSQLVKLNLQPDTKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
I+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TRVL ++ E+EETE
Sbjct: 381 IVRNGIGINEQASVELQGIKGMWSLRSATDDPYDTFLVVSFISETRVLAMNLEDELEETE 440
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C + ++QVT ++ L+S+ S+ + W P G S++V + N Q
Sbjct: 441 IEGFNSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTSRDLKNEWFAPVGYSVNVATANATQ 500
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ + ++ + L+Y+++CLDI+P+ P + +AAVG+W
Sbjct: 501 VLLATGGGHLVYLEIGDGVLNEVKYAKLDYDISCLDINPIG-----ENPNYSNIAAVGMW 555
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KE LGGEIIPRS+LM FEG YLL ALGDG + F L ++G
Sbjct: 556 TDISVRIYSLPDLNLITKEQLGGEIIPRSVLMCSFEGISYLLCALGDGHLLNFVLSMSTG 615
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
LTD+KKV+LGTQP L+TF S TT+VFA SDRPTVIYSSN KL++SNVNL++V+HMC
Sbjct: 616 ELTDRKKVSLGTQPITLRTFSSKDTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 675
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
N ++PDSLA+A + T GTIDEIQKLHIR++PLGE RRI++QE ++TF + + +
Sbjct: 676 FNVAAFPDSLAIAKEGELTIGTIDEIQKLHIRSIPLGEHARRISHQEQTRTFALCSVKYT 735
Query: 558 IQEAD 562
AD
Sbjct: 736 QSNAD 740
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/302 (45%), Positives = 210/302 (69%), Gaps = 13/302 (4%)
Query: 688 DLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
+LNL++AK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +DLLFI T+RY
Sbjct: 29 ELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGETQDLLFIATERYKFC 88
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
+L+ D + E++T+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+IP +
Sbjct: 89 VLQW--DTEASEVITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDN 146
Query: 808 DNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEFTKTP 866
+A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E+SLK+K+F + P
Sbjct: 147 KGQLKEAFNIRLEELQVLDIKFLYGCPKPTIVVLYQDNKDARHVKTYEVSLKDKDFIEGP 206
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDA 926
W Q+N++ ASL+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y +VDA
Sbjct: 207 WAQNNLDNGASLLIPVPPPLCGVLIIGEETIVYCSASAFKAIP---IRPSITRAYGRVDA 263
Query: 927 NGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
+G RYLLGD G L +L++ E EK+ G K+ELLGE + +++ G
Sbjct: 264 DGSRYLLGDHNGLLHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAFVFIG 317
Query: 986 ST 987
S+
Sbjct: 318 SS 319
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 166/233 (71%), Gaps = 12/233 (5%)
Query: 989 QSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLG 1048
QS A+ P E+H + ++D TFE + + L EY S++S F +D N Y+ +G
Sbjct: 736 QSNADDP-------EMHFVRLLDDQTFEFISTYPLDQFEYGCSILSCSFSDDSNVYYCIG 788
Query: 1049 TAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFE 1108
TA V PEENEP +GRI++F +DGKLQ IAEKE KGA YS+ FNGKLLA+IN ++L++
Sbjct: 789 TAYVMPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYK 848
Query: 1109 WTNE-----KELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISR 1163
W + +EL+ EC H +I+AL+++ +GDFI+VGDLM+S++LL +K EG+ EE +R
Sbjct: 849 WASREDGGSRELQTECGHHGHILALYVQTRGDFIVVGDLMKSISLLIFKHEEGAIEERAR 908
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DYN NWM+++EILDD+++LGAEN++NLF +K+S +DE+R+ L+ VG HL
Sbjct: 909 DYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERSRLEVVGEYHL 961
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TRVL ++
Sbjct: 376 DGSLRIVRNGIGINEQASVELQGIKGMWSLRSATDDPYDTFLVVSFISETRVLAMN 431
>gi|255571318|ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus communis]
gi|223534048|gb|EEF35767.1| DNA repair protein xp-E, putative [Ricinus communis]
Length = 1033
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/478 (53%), Positives = 334/478 (69%), Gaps = 14/478 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD AG L +L++ E EK+ G K+ELLGE SI ++YLDN VV++GS
Sbjct: 212 RYLLGDHAGLLHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAVVYIGSSY 265
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLVKLN PD G+YV V+ES+ NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 266 GDSQLVKLNLQPDAKGSYVEVLESYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 325
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
I+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 326 IVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 385
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C ++QVT S+ L+S+ ++ + W P G SI+V + N Q
Sbjct: 386 IEGFCSQVQTLFCHYAVYNQLVQVTSSSVRLVSSTTRELQNEWHAPAGYSINVATANATQ 445
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ + H LE E++CLDI+P+ P +QLAAVG+W
Sbjct: 446 VLLATGGGHLVYLEIGDGTLTHTKHAQLECEISCLDINPIG-----ENPNYSQLAAVGMW 500
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F L+ +G
Sbjct: 501 TDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCSFEGISYLLCALGDGHLLNFLLNLNTG 560
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
LTD+KKV+LGTQP L+TF S +TT+VFA SDRPTVIYSSN KL++SNVNL++V+HMC
Sbjct: 561 ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 620
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
N+ ++PDSLA+A + T GTID+IQKLHIR++PLGE RRI +QE S+TF V + +
Sbjct: 621 FNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAVCSLK 678
Score = 248 bits (633), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 173/256 (67%), Gaps = 11/256 (4%)
Query: 965 LGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLF 1024
LGEH + + S ++ Q++A E E H + ++D TFE + +QL
Sbjct: 656 LGEHARRICHQEQSRTFAVCSLKNQASAE-------ESETHFIRLLDDQTFEFISTYQLD 708
Query: 1025 PGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKG 1084
P EY S++S F +D N Y+ +GTA V PEENEP +GRI++F +DGKLQ I EKE KG
Sbjct: 709 PFEYGCSILSCSFSDDNNLYYCVGTAYVMPEENEPTKGRILVFLVEDGKLQVITEKETKG 768
Query: 1085 ACYSMCEFNGKLLASINSTVRLFEWT----NEKELRLECSHFNNIIALFLKVKGDFILVG 1140
A YS+ FNGKLLA+IN ++L++W +EL+ EC H +I+AL+++ +GDFI+VG
Sbjct: 769 AVYSLNSFNGKLLAAINQKIQLYKWMLRDDGSRELQSECGHHGHILALYVQTRGDFIVVG 828
Query: 1141 DLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAAT 1200
DLM+S++LL YK EG+ EE +RDYN NWM+++EILDD+++LGAEN++NLF +K+S
Sbjct: 829 DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 888
Query: 1201 SDEDRTHLQEVGTVHL 1216
+DE+R L+ VG HL
Sbjct: 889 TDEERGRLEVVGEYHL 904
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 154/286 (53%), Gaps = 68/286 (23%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T +LNL++AK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR
Sbjct: 25 TSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFR--------------- 69
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
HG D + +E +K
Sbjct: 70 --------------------PHGEAQDFLFIATER---------------------YKFC 88
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEF 862
L+ D E R+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E++LK+K+F
Sbjct: 89 VLQWDA-ETSELITRLEELQVLDIKFLYGCSKPTIVVLYQDNKDARHVKTYEVALKDKDF 147
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
+ PW Q+N++ A L+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y
Sbjct: 148 GEGPWAQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIP---IRPSITRAYG 204
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGE 967
+VDA+G RYLLGD AG L +L++ E EK+ G K+ELLGE
Sbjct: 205 RVDADGSRYLLGDHAGLLHLLVITHEKEKVTGL------KIELLGE 244
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS +LNL++AK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T
Sbjct: 23 NFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIAT 82
Query: 685 QRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYG 719
+R ++ E+ T E L+ + FLYG
Sbjct: 83 ERYKFCVLQWDAETSELITRLEE-LQVLDIKFLYG 116
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 321 DGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 376
>gi|55976392|sp|Q6E7D1.1|DDB1_SOLCE RecName: Full=DNA damage-binding protein 1; AltName:
Full=UV-damaged DNA-binding protein 1
gi|49484911|gb|AAT66742.1| UV-damaged DNA binding protein 1 [Solanum cheesmaniae]
Length = 1095
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/485 (51%), Positives = 335/485 (69%), Gaps = 14/485 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD G L +L++ E EK+ G K+ELLGE SI ++YLDN VF+GS
Sbjct: 272 RYLLGDHNGLLHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNAFVFIGSSY 325
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLVKLN PD G+YV V+E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 326 GDSQLVKLNLQPDTKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 385
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
I+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TRVL ++ E+EETE
Sbjct: 386 IVRNGIGINEQASVELQGIKGMWSLRSATDDPYDTFLVVSFISETRVLAMNLEDELEETE 445
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C + ++QVT ++ L+S+ S+ + W P G S++V + N Q
Sbjct: 446 IEGFNSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTSRDLKNEWFAPVGYSVNVATANATQ 505
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ + ++ + L+Y+++CLDI+P+ P + +AAVG+W
Sbjct: 506 VLLATGGGHLVYLEIGDGVLNEVKYAKLDYDISCLDINPIG-----ENPNYSNIAAVGMW 560
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KE LGGEIIPRS+LM FEG YLL ALGDG + F L ++G
Sbjct: 561 TDISVRIYSLPDLNLITKEQLGGEIIPRSVLMCSFEGISYLLCALGDGHLLNFVLSMSTG 620
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
LTD+KKV+LGTQP L+TF S TT+VFA SDRPTVIYSSN KL++SNVNL++V+HMC
Sbjct: 621 ELTDRKKVSLGTQPITLRTFSSKDTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 680
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
N ++PDSLA+A + T GTIDEIQKLHIR++PLGE RRI++QE ++TF + + +
Sbjct: 681 FNVAAFPDSLAIAKEGELTIGTIDEIQKLHIRSIPLGEHARRISHQEQTRTFALCSVKYT 740
Query: 558 IQEAD 562
AD
Sbjct: 741 QSNAD 745
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/307 (44%), Positives = 210/307 (68%), Gaps = 18/307 (5%)
Query: 688 DLNLVVAKNNRIEIHTVTPEGLR-----PVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
+LNL++AK RIEIH +TP+GL+ P+ ++ +YG+IA ++ FR + +DLLFI T+
Sbjct: 29 ELNLIIAKCTRIEIHLLTPQGLQCICLQPMLDVPIYGRIATLELFRPHGETQDLLFIATE 88
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
RY +L+ D + E++T+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+
Sbjct: 89 RYKFCVLQW--DTEASEVITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKV 146
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKE 861
IP + +A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E+SLK+K+
Sbjct: 147 IPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPKPTIVVLYQDNKDARHVKTYEVSLKDKD 206
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCY 921
F + PW Q+N++ ASL+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y
Sbjct: 207 FIEGPWAQNNLDNGASLLIPVPPPLCGVLIIGEETIVYCSASAFKAIP---IRPSITRAY 263
Query: 922 AKVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLS 980
+VDA+G RYLLGD G L +L++ E EK+ G K+ELLGE + +
Sbjct: 264 GRVDADGSRYLLGDHNGLLHLLVITHEKEKVTGL------KIELLGETSIASTISYLDNA 317
Query: 981 YIKPGST 987
++ GS+
Sbjct: 318 FVFIGSS 324
Score = 243 bits (621), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 166/233 (71%), Gaps = 12/233 (5%)
Query: 989 QSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLG 1048
QS A+ P E+H + ++D TFE + + L EY S++S F +D N Y+ +G
Sbjct: 741 QSNADDP-------EMHFVRLLDDQTFEFISTYPLDQFEYGCSILSCSFSDDSNVYYCIG 793
Query: 1049 TAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFE 1108
TA V PEENEP +GRI++F +DGKLQ IAEKE KGA YS+ FNGKLLA+IN ++L++
Sbjct: 794 TAYVMPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYK 853
Query: 1109 WTNE-----KELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISR 1163
W + +EL+ EC H +I+AL+++ +GDFI+VGDLM+S++LL +K EG+ EE +R
Sbjct: 854 WASREDGGSRELQTECGHHGHILALYVQTRGDFIVVGDLMKSISLLIFKHEEGAIEERAR 913
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DYN NWM+++EILDD+++LGAEN++NLF +K+S +DE+R+ L+ VG HL
Sbjct: 914 DYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERSRLEVVGEYHL 966
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLRI+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TRVL ++
Sbjct: 381 DGSLRIVRNGIGINEQASVELQGIKGMWSLRSATDDPYDTFLVVSFISETRVLAMN 436
>gi|12082087|dbj|BAB20761.1| UV-damaged DNA binding protein [Oryza sativa Japonica Group]
Length = 1090
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/473 (53%), Positives = 330/473 (69%), Gaps = 14/473 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD AG L +L+L E E++ G K+E LGE SI ++YLDNGVV+VGSR
Sbjct: 268 RYLLGDNAGILHLLVLTHERERVTGL------KIEYLGETSIASSISYLDNGVVYVGSRF 321
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLVKLN D NG+YV V+E + NL PI+D VVDL+RQGQGQ+VTCSG FK+GSLR
Sbjct: 322 GDSQLVKLNLQADPNGSYVEVLERYVNLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLR 381
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
++RNGIGI E A ++L GIKG+W+L D LV+SF+ TR L ++ E+EETE
Sbjct: 382 VVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVVSFISETRFLAMNMEDELEETE 441
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF + QT +C N ++QVT ++ L+S S+ V W P G S++V S N +Q
Sbjct: 442 IEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSRELVDQWNAPEGFSVNVASANASQ 501
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ S++ ++ H LE+E++C+D++P+ P + LAAVG+W
Sbjct: 502 VLLATGGGHLVYLEIKDSKLVEVKHIQLEHEISCVDLNPIG-----ENPQYSSLAAVGMW 556
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+LS P LE + KE LGGEI+PRS+L+ EG YLL ALGDG +F F L+ ++G
Sbjct: 557 TDISVRILSFPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCALGDGHLFSFLLNASTG 616
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
LTD+KKV+LGTQP L+TF S TT+VFA SDRPTVIYSSN KL++SNVNL++VNHMC
Sbjct: 617 ELTDRKKVSLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCP 676
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFG 550
N + PDSLA+A + + GTID+IQKLHIRT+PL RRI +QE S+T
Sbjct: 677 FNTAAIPDSLAIAKEGELSIGTIDDIQKLHIRTIPLDHQTRRICHQEQSRTLA 729
Score = 276 bits (706), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 143/299 (47%), Positives = 206/299 (68%), Gaps = 17/299 (5%)
Query: 689 LNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMI 748
LNL+VAK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T+RY +
Sbjct: 30 LNLIVAKCTRIEIHLLTPQGLQPMIDVPIYGRIATLELFRPHNETQDFLFIATERYKFCV 89
Query: 749 LECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
L+ G+ E+LT+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+IP +
Sbjct: 90 LQWDGE--KSELLTRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNK 147
Query: 809 NFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEFTKTPW 867
+A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E++LK+K+F + PW
Sbjct: 148 GQLKEAFNIRLEELQVLDIKFLYGCVKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPW 207
Query: 868 KQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDAN 927
Q+N++ A L+IPVP PLGG IIIG+E+I+Y + S P IK S I Y +VD +
Sbjct: 208 SQNNLDNGAGLLIPVPAPLGGVIIIGEETIVYCNANSTFRAIP--IKQSIIRAYGRVDPD 265
Query: 928 GERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
G RYLLGD AG L +L+L E E++ G K+E LGE SS+SY+ G
Sbjct: 266 GSRYLLGDNAGILHLLVLTHERERVTGL------KIEYLGETSIA-----SSISYLDNG 313
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 158/220 (71%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E E H + ++D TFE L +QL E+ S+IS F +D N Y+ +GTA V PEENEP
Sbjct: 742 ESETHFVRLLDHQTFEFLSIYQLDQYEHGCSIISCSFSDDNNVYYCVGTAYVLPEENEPS 801
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELR 1116
+GRI++F +DG+LQ I EKE KGA YS+ FNGKLLA+IN ++L++W EL+
Sbjct: 802 KGRILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQ 861
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+AL+ + +GDFI+VGDLM+S++LL YK E + EE++RDYN NWM+++E+L
Sbjct: 862 SECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEML 921
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DDE+++GAEN+YN+F +K+S A +DE+R L+ VG HL
Sbjct: 922 DDEIYIGAENNYNIFTVRKNSDAATDEERGRLEVVGEYHL 961
Score = 60.1 bits (144), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNGIGI E A ++L GIKG+W+L D LV+SF+ TR L ++
Sbjct: 377 DGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVVSFISETRFLAMN 432
>gi|356512636|ref|XP_003525024.1| PREDICTED: DNA damage-binding protein 1a-like isoform 1 [Glycine
max]
Length = 1089
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/480 (51%), Positives = 335/480 (69%), Gaps = 14/480 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD G L +L++ E EK+ G K+E LGE SI ++YLDN V++GS
Sbjct: 267 RYLLGDHTGLLSLLVITHEKEKVTGL------KIEPLGETSIASTISYLDNAFVYIGSSY 320
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL+KLN PD G+YV +E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 321 GDSQLIKLNLQPDAKGSYVEGLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 381 VVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 440
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C + ++QVT S+ L+S+ ++ + W P+G S++V + N Q
Sbjct: 441 IEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRELRNEWHAPSGYSVNVATANATQ 500
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ ++++ H LEYE++CLDI+P+ P + LAAVG+W
Sbjct: 501 VLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPIG-----ENPNHSHLAAVGMW 555
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F L+ ++G
Sbjct: 556 TDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFMLNTSTG 615
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
L D+KKV+LGTQP L+TF S +TT+VFA SDRPTVIYSSN KL++SNVNL++V+HMC
Sbjct: 616 ELADRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 675
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
N+ ++PDSLA+A + T GTID+IQKLHIR++PLGE RRI +QE S+TF + + + +
Sbjct: 676 FNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLKYN 735
Score = 266 bits (680), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 207/307 (67%), Gaps = 13/307 (4%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AK RIEIH ++P+GL+P+ ++ +YG+IA ++ FR + +D LFI T+
Sbjct: 24 FTSPQDLNLIIAKCTRIEIHLLSPQGLQPMLDVPIYGRIATLELFRPHGEAQDYLFIATE 83
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
RY +L+ D + E++T+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+
Sbjct: 84 RYKFCVLQW--DSETAELVTRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKV 141
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKE 861
IP + +A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E++LK+K+
Sbjct: 142 IPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVLYQDNKDARHVKTYEVALKDKD 201
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCY 921
F + PW Q+N++ A L+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y
Sbjct: 202 FLEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIP---IRPSITKAY 258
Query: 922 AKVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLS 980
+VD +G RYLLGD G L +L++ E EK+ G K+E LGE + +
Sbjct: 259 GRVDPDGSRYLLGDHTGLLSLLVITHEKEKVTGL------KIEPLGETSIASTISYLDNA 312
Query: 981 YIKPGST 987
++ GS+
Sbjct: 313 FVYIGSS 319
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 156/218 (71%), Gaps = 4/218 (1%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
E+H + ++D TFE + + L EY +IS F +D N Y+ +GTA V PEENEP +G
Sbjct: 743 EMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDDNNVYYCVGTAYVLPEENEPTKG 802
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELRLE 1118
RI++F +DGKLQ IAEKE KGA Y + FNGKLLA+IN ++L++W EL+ E
Sbjct: 803 RILVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSE 862
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
C H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWM+++EI+DD
Sbjct: 863 CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDD 922
Query: 1179 ELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++LGAENS+NLF +K+S +DE+R L+ VG HL
Sbjct: 923 DIYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHL 960
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 376 DGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
>gi|356512638|ref|XP_003525025.1| PREDICTED: DNA damage-binding protein 1a-like isoform 2 [Glycine
max]
Length = 1068
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/480 (51%), Positives = 335/480 (69%), Gaps = 14/480 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD G L +L++ E EK+ G K+E LGE SI ++YLDN V++GS
Sbjct: 246 RYLLGDHTGLLSLLVITHEKEKVTGL------KIEPLGETSIASTISYLDNAFVYIGSSY 299
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL+KLN PD G+YV +E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 300 GDSQLIKLNLQPDAKGSYVEGLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 359
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE
Sbjct: 360 VVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 419
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +C + ++QVT S+ L+S+ ++ + W P+G S++V + N Q
Sbjct: 420 IEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRELRNEWHAPSGYSVNVATANATQ 479
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ ++++ H LEYE++CLDI+P+ P + LAAVG+W
Sbjct: 480 VLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPIG-----ENPNHSHLAAVGMW 534
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F L+ ++G
Sbjct: 535 TDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFMLNTSTG 594
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
L D+KKV+LGTQP L+TF S +TT+VFA SDRPTVIYSSN KL++SNVNL++V+HMC
Sbjct: 595 ELADRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 654
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
N+ ++PDSLA+A + T GTID+IQKLHIR++PLGE RRI +QE S+TF + + + +
Sbjct: 655 FNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLKYN 714
Score = 236 bits (603), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 156/218 (71%), Gaps = 4/218 (1%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
E+H + ++D TFE + + L EY +IS F +D N Y+ +GTA V PEENEP +G
Sbjct: 722 EMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDDNNVYYCVGTAYVLPEENEPTKG 781
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELRLE 1118
RI++F +DGKLQ IAEKE KGA Y + FNGKLLA+IN ++L++W EL+ E
Sbjct: 782 RILVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSE 841
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
C H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWM+++EI+DD
Sbjct: 842 CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDD 901
Query: 1179 ELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++LGAENS+NLF +K+S +DE+R L+ VG HL
Sbjct: 902 DIYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHL 939
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 190/307 (61%), Gaps = 34/307 (11%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AK RIEIH ++P+GL+P+ ++ +YG+IA ++ FR + +D LFI T+
Sbjct: 24 FTSPQDLNLIIAKCTRIEIHLLSPQGLQPMLDVPIYGRIATLELFRPHGEAQDYLFIATE 83
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
RY +L+ D + E++T+A G+VSDRIG+P++NG ++
Sbjct: 84 RYKFCVLQW--DSETAELVTRAMGDVSDRIGRPTDNG---------------------QV 120
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKE 861
IP + +A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E++LK+K+
Sbjct: 121 IPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVLYQDNKDARHVKTYEVALKDKD 180
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCY 921
F + PW Q+N++ A L+IPVP PL G +IIG+E+I+Y S ++ A+ I+ S Y
Sbjct: 181 FLEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIP---IRPSITKAY 237
Query: 922 AKVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLS 980
+VD +G RYLLGD G L +L++ E EK+ G K+E LGE + +
Sbjct: 238 GRVDPDGSRYLLGDHTGLLSLLVITHEKEKVTGL------KIEPLGETSIASTISYLDNA 291
Query: 981 YIKPGST 987
++ GS+
Sbjct: 292 FVYIGSS 298
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS DLNL++AK RIEIH ++P+GL+P+ ++ +YG+IA ++ FR + +D LFI T
Sbjct: 23 NFTSPQDLNLIIAKCTRIEIHLLSPQGLQPMLDVPIYGRIATLELFRPHGEAQDYLFIAT 82
Query: 685 QR 686
+R
Sbjct: 83 ER 84
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 355 DGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 410
>gi|357132340|ref|XP_003567788.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
distachyon]
Length = 1090
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/473 (52%), Positives = 332/473 (70%), Gaps = 14/473 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD G L +L+L +E E++ G K+E LGE S+ ++YLDNGVV+VGSR
Sbjct: 268 RYLLGDNTGILHLLVLTQERERVTGL------KIEHLGETSVASSISYLDNGVVYVGSRF 321
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLVKLN D G++V V+E + NL PI+D VVDL+RQGQGQ+VTCSG FK+GS+R
Sbjct: 322 GDSQLVKLNLQADATGSFVEVLERYVNLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSIR 381
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
++RNGIGI E A ++L GIKG+W+L D LV+SF+ TR L ++ E+EETE
Sbjct: 382 VVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDTFLVVSFISETRFLAMNMEDELEETE 441
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF + QT +C N ++QVT ++ L+S S+ V W P+G S++V S N +Q
Sbjct: 442 IEGFDAQIQTLFCQNAISDLLIQVTANSVRLVSCASRELVDHWNAPDGFSVNVASANASQ 501
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ +++ ++ H LE+E++C+D++P+ P + LAA+G+W
Sbjct: 502 VLLATGGGHLVYLEIRDAKLVEVKHAQLEHEISCVDLNPIG-----ENPQYSSLAAIGMW 556
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS LLSLP LE + KE LGGEI+PRS+L+ EG YLL ALGDG +F F L+ ++G
Sbjct: 557 TDISVSLLSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCALGDGHLFSFLLNVSTG 616
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
LTDKKKV+LGTQP L+TF S TT+VFA SDRPTVIYSSN KL++SNVNL++VNHMC
Sbjct: 617 ELTDKKKVSLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCP 676
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFG 550
N ++PDSLA+A + + GTID+IQKLHIRT+PL E RRI +QE S+T
Sbjct: 677 FNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRICHQEQSRTLA 729
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/305 (46%), Positives = 210/305 (68%), Gaps = 17/305 (5%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T T LNL+VAK RIEIH +TP+G++P+ ++ +YG+IA ++ FR PT+ +D LFI T+
Sbjct: 24 FTSNTQLNLIVAKCTRIEIHLLTPQGIQPLLDVPIYGRIATIELFRPPTEAQDFLFIATE 83
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
RY +L+ D + E++T++ G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+
Sbjct: 84 RYKFCVLQW--DAEKSELITRSVGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKV 141
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKE 861
IP + +A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E++LK+K+
Sbjct: 142 IPFDNKGQLKEAFNIRLEELQVLDIKFLYGCLRPTIVVLYQDNKDARHVKTYEVALKDKD 201
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCY 921
F + PW Q+N++ A L+IPVP PLGG IIIG+E+I+Y + S P IK S I Y
Sbjct: 202 FVEGPWSQNNLDNGAGLLIPVPAPLGGVIIIGEETIVYCNANSTFKAIP--IKQSIIRAY 259
Query: 922 AKVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLS 980
+VD +G RYLLGD G L +L+L +E E++ G K+E LGE SS+S
Sbjct: 260 GRVDPDGSRYLLGDNTGILHLLVLTQERERVTGL------KIEHLGETSVA-----SSIS 308
Query: 981 YIKPG 985
Y+ G
Sbjct: 309 YLDNG 313
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 157/220 (71%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E E H + ++D TFE L H L E S+IS F +D N Y+ +GTA V PEENEP
Sbjct: 742 ESEAHFIRLLDHQTFEFLSTHPLDQYECGCSMISCSFSDDNNFYYCVGTAYVLPEENEPT 801
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK----ELR 1116
+GRI++F +DG+LQ I EKE KGA YS+ FNGKLLA+IN ++L++W + EL+
Sbjct: 802 KGRILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMTREDGSHELQ 861
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+ALF + +GDFI+VGDLM+S++LL YK E + EE++RDYN NWMT++E++
Sbjct: 862 SECGHHGHILALFTQTRGDFIVVGDLMKSISLLVYKHEESAIEELARDYNANWMTAVEMI 921
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DD++++GAENSYNLF +K+S A +DE+R L+ VG HL
Sbjct: 922 DDDIYVGAENSYNLFTVRKNSDAATDEERGRLEVVGEYHL 961
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GS+R++RNGIGI E A ++L GIKG+W+L D LV+SF+ TR L ++
Sbjct: 377 DGSIRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDTFLVVSFISETRFLAMN 432
>gi|320163506|gb|EFW40405.1| UV-damaged DNA binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1123
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 257/531 (48%), Positives = 343/531 (64%), Gaps = 29/531 (5%)
Query: 79 SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSR 138
+ R+LL D G L +LL + + V K++ LG SI CLTYLDNGVVF GS+
Sbjct: 316 TNRFLLADSEGNLLSVLLTHDRQD----KVTAIKIDRLGVTSILSCLTYLDNGVVFGGSQ 371
Query: 139 LGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSL 198
GDSQL++L DE G++V V+ESF+NL PI DM VVDLERQGQ Q+VTCSG FK+GSL
Sbjct: 372 FGDSQLLRLATERDETGSFVRVLESFSNLGPICDMAVVDLERQGQCQVVTCSGAFKDGSL 431
Query: 199 RIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEET 257
R++RNG+GIEE A I+LPGIKGIW+L + LV+SF+G TR+L +S G E+EE
Sbjct: 432 RVVRNGVGIEEQATIELPGIKGIWSLKPTEAALYRSILVVSFIGETRLLGMSSGEELEEM 491
Query: 258 EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPN-------GKSIS 310
++ G + QT +C NV LQVT + L++ ++A V+SW P + G I+
Sbjct: 492 QIPGLDQNSQTLHCANVSGDQFLQVTATEVRLVNCSTQALVASWSPASVPDRYAPGTRIT 551
Query: 311 VVSCNKNQVLCATGC-DVYYLEVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAK 368
+ S N QVL A G + L V S + + H +++E+AC+DI+P+ + S
Sbjct: 552 MASSNDFQVLVACGGGHLVCLSVEASGNLVPIGHARMDHEIACVDITPIGGQPLS----- 606
Query: 369 AQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMF 428
Q+ AVGLWTDI+ R+LS+P+LE+V +PL G+IIPRSILM FEG LL ALGDGSM
Sbjct: 607 -QVCAVGLWTDITVRVLSVPTLEQVLVQPLEGQIIPRSILMATFEGQPRLLCALGDGSMH 665
Query: 429 YFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVN 488
+S D S +LTD K+V+LGTQP +L F S T+VFACSDRPTVIYSSN KL++SNVN
Sbjct: 666 TYSFDVLSQQLTDHKRVSLGTQPILLSAFVSRGQTHVFACSDRPTVIYSSNRKLLYSNVN 725
Query: 489 LRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQT 548
LR+V H+C +ES+ D LA+ + ++ T GTIDEIQKLH+R +PLGE PRRIAY E ++T
Sbjct: 726 LREVTHVCPFTSESFADCLAVVSSTSLTIGTIDEIQKLHVRAIPLGEMPRRIAYHEPTRT 785
Query: 549 FGVITTRIDIQEADGSTP---------VRPSASTQAQNTTSSTISSLSYIK 590
+GV T + GS VRP A + S + S+++
Sbjct: 786 YGVATVTLAEPLPVGSNSGNVAARAQNVRPMAFDDGPRSPSDVLEDTSFVR 836
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 186/302 (61%), Gaps = 43/302 (14%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
NL++AK+ RIEIHT+ +G+ + + +YG+IA+M+ FR P ++DLLFI T+RY +L
Sbjct: 54 NLIIAKSTRIEIHTIAADGIHGLLDAGMYGRIAIMQLFRPPNAQQDLLFICTERYAFTVL 113
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARV------------------- 790
D E++TKA+G++ D+ G P++ G I +IDP+ R+
Sbjct: 114 AY--DAQTGELVTKANGDLQDKSGNPADLGPIGVIDPDCRLIGENAALDLWGGGHPPFYF 171
Query: 791 -----------IGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTII 839
IGLRLYNG+FK+IP++ A +IR+EEL++ D++FL G PTI+
Sbjct: 172 GCSCSLRLVVWIGLRLYNGMFKVIPIDPHGQFKDAFNIRLEELQVFDIKFLRGYDRPTIL 231
Query: 840 CIHQDVN-GRHVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESIL 898
++QD RHVKT+++ LKEKEF + PW Q+N+E ASL+IPV PLGG +I+G+++I
Sbjct: 232 VLYQDTKETRHVKTYQVLLKEKEFAEGPWAQNNVEGGASLLIPVLMPLGGVLIVGEQTIT 291
Query: 899 YHSGKSY--VAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFS 956
YHSG ++ VA+ P IIK CY+ +D N R+LL D G L +LL ++ D +
Sbjct: 292 YHSGSAFRSVAMRPAIIK-----CYSVIDTN--RFLLADSEGNLLSVLL-THDRQDKVTA 343
Query: 957 VK 958
+K
Sbjct: 344 IK 345
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 150/224 (66%), Gaps = 8/224 (3%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPN---TYFVLGTAVVHPEENEPKQGRII 1065
+ D TFEI + QL E +S IS F D + Y V+GTA V P E+EPK+GRI+
Sbjct: 837 LFDGQTFEIRDSFQLPSTETIMSFISCSFANDSSDSTVYLVVGTAFVIPSEDEPKRGRIL 896
Query: 1066 IFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELRLECSH 1121
+F G L + K++KG YS+ FNGKLLA INS V LF+W +EL ECSH
Sbjct: 897 VFDVAGGALHLVTAKDVKGCVYSLNAFNGKLLAGINSKVNLFKWNLTGDGIRELVSECSH 956
Query: 1122 FNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF 1181
+I+ L+LK +GDFI+VGDLMRS++LL YK+ S EEI++D PNW+T++++LDD++F
Sbjct: 957 HGHILTLYLKSRGDFIIVGDLMRSISLLMYKSGTSSIEEIAQDTCPNWVTAVDMLDDDVF 1016
Query: 1182 LGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLVQCR 1225
+G E+S+N+F C+++ A++DE+R L+ VG H VG+ + Q R
Sbjct: 1017 IGGESSFNIFTCRRNLEASTDEERKRLEVVGEFH-VGEFINQFR 1059
Score = 70.1 bits (170), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLR++RNG+GIEE A I+LPGIKGIW+L + LV+SF+G TR+L +S E
Sbjct: 428 DGSLRVVRNGVGIEEQATIELPGIKGIWSLKPTEAALYRSILVVSFIGETRLLGMSSGE 486
>gi|449435512|ref|XP_004135539.1| PREDICTED: DNA damage-binding protein 1-like [Cucumis sativus]
Length = 1093
Score = 477 bits (1228), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/483 (51%), Positives = 335/483 (69%), Gaps = 16/483 (3%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD AG L +L++ E++ V K+ELLGE SI ++YLDN V++GS G
Sbjct: 267 RYLLGDHAGLLHLLVITHEKE-----RVTGLKIELLGETSIASTISYLDNAFVYIGSSYG 321
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN PD G+YV V+E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR+
Sbjct: 322 DSQLVKLNVQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRV 381
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETEM 259
+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE+
Sbjct: 382 VRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEI 441
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF S QT +C + ++QVT S+ L+S+ ++ ++ W P+ SI+V + N +QV
Sbjct: 442 EGFNSQVQTLFCHDALFNQLVQVTSSSVRLVSSTTRELLNEWNAPSNYSINVATANASQV 501
Query: 320 LCATGCDVY-YLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWT 378
L ATG V +LE+ + + H LE+E++CLDI+P+ + P +QLAAVG+WT
Sbjct: 502 LLATGGGVLVHLEICDGLLVEKKHIQLEHEISCLDINPIGD-----NPNCSQLAAVGMWT 556
Query: 379 DISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG- 437
DIS R+ SLP L + KE LGGEIIPRS+L+ FEG YLL ALGDG + F L+ S
Sbjct: 557 DISVRIFSLPDLNLLTKEQLGGEIIPRSVLLCTFEGISYLLCALGDGHLLNFILNTNSNS 616
Query: 438 ---RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNH 494
L D+KKV+LGTQP L+TF S + T+VFA SDRPTVIYSSN KL++SNVNL++V+H
Sbjct: 617 NSCELMDRKKVSLGTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSH 676
Query: 495 MCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
MC N+ ++PDSLA+A + T GTID+IQKLHIR++PLGE RRI +QE S+TF + +
Sbjct: 677 MCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSL 736
Query: 555 RID 557
R +
Sbjct: 737 RYN 739
Score = 267 bits (683), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 208/301 (69%), Gaps = 11/301 (3%)
Query: 688 DLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
+LNL++AK RIEIH +T +GL+P+ ++ +YG+IA ++ FR + +D LFI T+RY
Sbjct: 29 ELNLIIAKCTRIEIHLLTAQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFC 88
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
+L+ D ++ E++T+A G+VSDRIG+P+++G I IIDP+ R+IGL LY+GLFK+IP +
Sbjct: 89 VLQW--DTESSELITRAMGDVSDRIGRPTDSGQIGIIDPDCRLIGLHLYDGLFKVIPFDN 146
Query: 808 DNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEFTKTP 866
+A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E+ LK+K+F + P
Sbjct: 147 KGQLKEAFNIRLEELQVLDIKFLYGCSRPTIVVLYQDNKDARHVKTYEVVLKDKDFVEGP 206
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDA 926
W Q+N++ A+++IPVP PL G IIIG+E+I+Y S ++ A+ ++ S Y +VDA
Sbjct: 207 WSQNNLDNGAAVLIPVPPPLCGVIIIGEETIVYCSATAFKAIP---VRPSITRAYGRVDA 263
Query: 927 NGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPGS 986
+G RYLLGD AG L +L++ E++ V K+ELLGE + +++ GS
Sbjct: 264 DGSRYLLGDHAGLLHLLVITHEKE-----RVTGLKIELLGETSIASTISYLDNAFVYIGS 318
Query: 987 T 987
+
Sbjct: 319 S 319
Score = 240 bits (612), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
+ E+H + ++D TFE + + L EY S++S F +D N Y+ +GTA V PEENEP
Sbjct: 745 DTEMHFIRLLDDQTFESISTYALDTYEYGCSILSCSFSDDNNVYYCVGTAYVMPEENEPT 804
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELR 1116
+GRI++F ++GKLQ IAEKE KG+ YS+ FNGKLLA+IN ++L++WT +EL+
Sbjct: 805 KGRILVFVVEEGKLQLIAEKETKGSVYSLNAFNGKLLAAINQKIQLYKWTLRDDGTRELQ 864
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWM+++EIL
Sbjct: 865 SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 924
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DD+++LGAEN +NLF +K+S +DE+R+ L+ VG HL
Sbjct: 925 DDDIYLGAENYFNLFTVRKNSEGATDEERSRLEVVGEYHL 964
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 376 DGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
>gi|218197365|gb|EEC79792.1| hypothetical protein OsI_21216 [Oryza sativa Indica Group]
Length = 1089
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/458 (53%), Positives = 323/458 (70%), Gaps = 14/458 (3%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD AG L +L+L E E++ G K+E LGE SI ++YLDNGVV+VGSR
Sbjct: 268 RYLLGDNAGILHLLVLTHERERVTGL------KIEYLGETSIASSISYLDNGVVYVGSRF 321
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLVKLN D NG+YV V+E + NL PI+D VVDL+RQGQGQ+VTCSG FK+GSLR
Sbjct: 322 GDSQLVKLNLQADPNGSYVEVLERYVNLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLR 381
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE 258
++RNGIGI E A ++L GIKG+W+L D LV+SF+ TR L ++ E+EETE
Sbjct: 382 VVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVVSFISETRFLAMNMEDELEETE 441
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF + QT +C N ++QVT ++ L+S S+ V W P G S++V S N +Q
Sbjct: 442 IEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSRELVDQWNAPEGFSVNVASANASQ 501
Query: 319 VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG + YLE+ S++ ++ H LE+E++C+D++P+ P + LAAVG+W
Sbjct: 502 VLLATGGGHLVYLEIKDSKLVEVKHIQLEHEISCVDLNPIG-----ENPQYSSLAAVGMW 556
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+LSLP LE + KE LGGEI+PRS+L+ EG YLL ALGDG +F F L+ ++G
Sbjct: 557 TDISVRILSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCALGDGHLFSFLLNASTG 616
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
LTD+KKV+LGTQP L+TF S TT+VFA SDRPTVIYSSN KL++SNVNL++VNHMC
Sbjct: 617 ELTDRKKVSLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCP 676
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGE 535
N + PDSLA+A + + GTID+IQKLHIRT+PL E
Sbjct: 677 FNTAAIPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNE 714
Score = 276 bits (707), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/299 (47%), Positives = 206/299 (68%), Gaps = 17/299 (5%)
Query: 689 LNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMI 748
LNL+VAK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T+RY +
Sbjct: 30 LNLIVAKCTRIEIHLLTPQGLQPMIDVPIYGRIATLELFRPHNETQDFLFIATERYKFCV 89
Query: 749 LECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
L+ G+ E+LT+A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+IP +
Sbjct: 90 LQWDGE--KSELLTRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNK 147
Query: 809 NFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEFTKTPW 867
+A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E++LK+K+F + PW
Sbjct: 148 GQLKEAFNIRLEELQVLDIKFLYGCVKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPW 207
Query: 868 KQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDAN 927
Q+N++ A L+IPVP PLGG IIIG+E+I+Y + S P IK S I Y +VD +
Sbjct: 208 SQNNLDNGAGLLIPVPAPLGGVIIIGEETIVYCNANSTFRAIP--IKQSIIRAYGRVDPD 265
Query: 928 GERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
G RYLLGD AG L +L+L E E++ G K+E LGE SS+SY+ G
Sbjct: 266 GSRYLLGDNAGILHLLVLTHERERVTGL------KIEYLGETSIA-----SSISYLDNG 313
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 158/220 (71%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E E H + ++D TFE L +QL E+ S+IS F +D N Y+ +GTA V PEENEP
Sbjct: 741 ESETHFVRLLDHQTFEFLSIYQLDQYEHGCSIISCSFSDDNNVYYCVGTAYVLPEENEPS 800
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELR 1116
+GRI++F +DG+LQ I EKE KGA YS+ FNGKLLA+IN ++L++W EL+
Sbjct: 801 KGRILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQ 860
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+AL+ + +GDFI+VGDLM+S++LL YK E + EE++RDYN NWM+++E+L
Sbjct: 861 SECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEML 920
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DDE+++GAEN+YN+F +K+S A +DE+R L+ VG HL
Sbjct: 921 DDEIYIGAENNYNIFTVRKNSDAATDEERGRLEVVGEYHL 960
Score = 60.1 bits (144), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNGIGI E A ++L GIKG+W+L D LV+SF+ TR L ++
Sbjct: 377 DGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVVSFISETRFLAMN 432
>gi|384250802|gb|EIE24281.1| hypothetical protein COCSUDRAFT_28729 [Coccomyxa subellipsoidea
C-169]
Length = 1101
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/479 (51%), Positives = 326/479 (68%), Gaps = 16/479 (3%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD G L++L+L+ + + V KVE LG S P LTYLDNGVVFVGS G
Sbjct: 273 RYLLGDYVGNLYLLVLQHDGE-----HVAGLKVEPLGRTSAPSTLTYLDNGVVFVGSSGG 327
Query: 141 DSQLVKLNRSP---DENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGS 197
DSQLV+L+ +P E +V V+E+ TNL PIID VVVDLERQGQGQ+V CSG +GS
Sbjct: 328 DSQLVRLHPTPVTPQEPSNFVEVLETMTNLGPIIDFVVVDLERQGQGQVVMCSGIMADGS 387
Query: 198 LRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGA-EVEE 256
LRI+RNGIG+ E A ++LPGIKG+WAL D LV+SFVG TR+L ++ E++E
Sbjct: 388 LRIVRNGIGMIEQATVELPGIKGMWALRASHMDAFDTFLVISFVGETRILAINADDELDE 447
Query: 257 TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNK 316
E+ GF++D QT CGN ++QV + L+ ++ W PP G +I+V S +
Sbjct: 448 AELPGFSADAQTLCCGNTVSDHLVQVAGADVRLVDASTRQLTHQWRPPAGLNINVASVSP 507
Query: 317 NQVLCATG-CDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVG 375
Q +T ++ YLE+ S I+Q H L+ EVAC+DISPLS + + A L AVG
Sbjct: 508 TQASPSTAHGNLVYLELGESGIEQKGHVKLDAEVACVDISPLSEDGEA-----ASLLAVG 562
Query: 376 LWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPA 435
W D+ + SLP++ + EPLGGEIIPRS+L FEG YLL A+GDG ++ F +D A
Sbjct: 563 TW-DMRVHIFSLPAMAPLVSEPLGGEIIPRSVLFAAFEGVPYLLCAMGDGQLYNFHVDEA 621
Query: 436 SGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHM 495
+G L D+KK+ LGT+P +L++FRS ++VFA SDRPTVIYS+N KL++SNVN +VN M
Sbjct: 622 TGALADRKKICLGTKPIMLRSFRSNGQSHVFAASDRPTVIYSANKKLLYSNVNENEVNFM 681
Query: 496 CSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
S N+ S+PDSLALA + T G+ID+IQKLHIRTVPLGE PRR+A+QE+S++F V+T+
Sbjct: 682 TSFNSSSFPDSLALAKEGAMTIGSIDQIQKLHIRTVPLGEQPRRLAHQEASRSFLVLTS 740
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 201/303 (66%), Gaps = 15/303 (4%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TD+NL+++K RIEIHT+TPEGL+ V ++ +YG++A M+ FR + KDLLF+ T+R
Sbjct: 30 TSPTDINLIISKCTRIEIHTLTPEGLKGVADVAIYGRVATMELFRPVGESKDLLFLSTER 89
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y +LE D + E++T+A+G++ D++G+P +NG I I+DP R+IGL LY+GLFK+I
Sbjct: 90 YKFCVLEY--DSETGELVTRANGDIEDQVGRPCDNGQIGIVDPGCRMIGLHLYDGLFKVI 147
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEF 862
P++ +A ++R++EL + D+ FL GC PTI ++QD + RH+KT+E+ LKEK+
Sbjct: 148 PIDDKGQLHEAFNMRIDELNVIDMIFLEGCAKPTIAVLYQDNKDARHIKTYEVVLKEKDL 207
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
T+ PW+Q N++ AS VI VPEPLGGA+++G+ I Y + P IK++ I +
Sbjct: 208 TEGPWRQSNLDAGASRVIAVPEPLGGALVVGESVIAYMGQGQAMKCTP--IKATIIRAHG 265
Query: 923 KVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYI 982
+VD +G RYLLGD G L++L+L+ + + V KVE LG P S+L+Y+
Sbjct: 266 RVDEDGSRYLLGDYVGNLYLLVLQHDGE-----HVAGLKVEPLG-RTSAP----STLTYL 315
Query: 983 KPG 985
G
Sbjct: 316 DNG 318
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 141/212 (66%), Gaps = 4/212 (1%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFH 1068
++D TFE L L E + S F +DP Y+V+GTA+ EE EP +GRI++F
Sbjct: 758 LLDDQTFETLDRFGLETNEVCCAAASMSFSDDPCPYYVVGTAITVAEEPEPTKGRILVFG 817
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNE----KELRLECSHFNN 1124
GKL + EKE+KGA Y++ F GKL+A INS V+LF+WT +EL ECSH +
Sbjct: 818 AKGGKLSLVCEKEVKGAAYNLHPFQGKLIAGINSRVQLFKWTQSEDGSRELTNECSHVGH 877
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
++AL++ +GDF++VGDLMRSL LL Y+ EG E +RDY +WMT++E+LDD+ +LGA
Sbjct: 878 VLALYIVTRGDFVIVGDLMRSLQLLIYRADEGILEVRARDYKTHWMTAVEVLDDDTYLGA 937
Query: 1185 ENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
ENS N+F +K++ A +DEDR L+ VG HL
Sbjct: 938 ENSNNIFTLRKNTDAAADEDRNRLETVGQYHL 969
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSG-AE 59
+GSLRI+RNGIG+ E A ++LPGIKG+WAL D LV+SFVG TR+L ++ E
Sbjct: 385 DGSLRIVRNGIGMIEQATVELPGIKGMWALRASHMDAFDTFLVISFVGETRILAINADDE 444
Query: 60 WGFHLLRGFSS 70
L GFS+
Sbjct: 445 LDEAELPGFSA 455
>gi|428164905|gb|EKX33915.1| hypothetical protein GUITHDRAFT_158867 [Guillardia theta CCMP2712]
Length = 1092
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/479 (49%), Positives = 328/479 (68%), Gaps = 10/479 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD G+L++L+LE DG V K++ LGE S + +TYLD+GVVF+GS G
Sbjct: 268 RYLLGDHLGQLYVLVLE----FDGN-KVLGLKLDTLGETSSAKTITYLDSGVVFIGSCFG 322
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL++L+ DEN + + V+ESFTNL PI D VVDLERQGQGQ+VTCSG K+GSLR+
Sbjct: 323 DSQLIRLHPDKDENDSNIEVLESFTNLGPIQDFCVVDLERQGQGQVVTCSGTLKDGSLRV 382
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
+RNGIGI E A ++LPGIKG+W+L D L+ SFV TRVL ++ E+ ETE+
Sbjct: 383 VRNGIGINEQAAVELPGIKGLWSLRESIDAQYDKYLIQSFVNETRVLEIADEELSETEID 442
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF + QT +C NV +LQ+T + L+ST+SK + W PPNG+ I+V N QV+
Sbjct: 443 GFDHNAQTIFCSNVLGDCLLQITEVSLRLVSTKSKQLLKEWFPPNGERITVAGGNVQQVV 502
Query: 321 CATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379
+G + YL+V ++ ++ ++ E+ACL+++PL + S+ K+ AVG W +
Sbjct: 503 LTSGKRTLIYLDVSNGDVTEVKRIEMDQEIACLNLNPLGEK---SDHNKSDFVAVGHW-N 558
Query: 380 ISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRL 439
+S +L LPS+E VC E +GG+ IPRS+L+ EG YLL ALGDG +F F++D ++ ++
Sbjct: 559 LSLSMLRLPSMEVVCTESIGGDAIPRSLLLVTLEGVDYLLCALGDGYLFTFAIDASTAQI 618
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN 499
++KK++LGT P +L F S T+VFA SDRPTVIYS+N KL+FSNVNL++V M N
Sbjct: 619 GERKKISLGTHPMILSKFMSRGATHVFAASDRPTVIYSNNRKLLFSNVNLKEVTQMAPFN 678
Query: 500 AESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDI 558
+E +PDSLA+AT+++ G ID+IQKLHIRTV L E PRRI +QESS+TF V T I I
Sbjct: 679 SEGFPDSLAIATETSLRIGVIDDIQKLHIRTVYLREQPRRICHQESSKTFCVATLSIRI 737
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/282 (42%), Positives = 190/282 (67%), Gaps = 10/282 (3%)
Query: 688 DLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
D NL+VAK +R+ I+T+TPEGL+PV + +YG+IA ++ + +++ L+I+T+R
Sbjct: 27 DTNLIVAKGSRLVIYTLTPEGLQPVLDTGIYGRIAAIELYTVAGAERESLYILTERLKFC 86
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
I+E D E++TKA G+V D +G+P + G IA IDPE R+IG LY+GLFK+IP++
Sbjct: 87 IVEY--DSSTGELITKAMGDVQDSVGRPVDGGPIAHIDPERRMIGFLLYDGLFKVIPIDT 144
Query: 808 DNFELK-ASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNG-RHVKTHEISLKEKEFTKT 865
N +L+ A +IR+EEL++ DVQFL+G PTI+ ++QD RH+KT+++S+++K+F
Sbjct: 145 RNGQLREAFNIRLEELQVLDVQFLYGYAQPTIVLLYQDPKEMRHLKTYQVSIRDKDFIAG 204
Query: 866 PWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVD 925
PW Q +E+ A+++IPVP P+GG I++G+++I Y +G + + I + K+D
Sbjct: 205 PWSQTGVEIGATMIIPVPTPIGGCILLGEQTISYLNGDKGDTKTIH-MDMTVIRAWGKID 263
Query: 926 ANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+G RYLLGD G+L++L+LE DG V K++ LGE
Sbjct: 264 EDGRRYLLGDHLGQLYVLVLE----FDGN-KVLGLKLDTLGE 300
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 148/220 (67%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
EVE + + D TFEIL +QL E S+ + F +DP Y+++GTA P+E+EPK
Sbjct: 743 EVEEQFIKLFDDQTFEILDTYQLQEFENTCSVECASFSDDPTLYYIVGTATAVPQESEPK 802
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW----TNEKELR 1116
+GR+++F D KL A KEIKGA Y + FNGKLLA INS + LF T EL
Sbjct: 803 EGRLLVFEVIDRKLHLKASKEIKGAPYQIKPFNGKLLAGINSKIELFRLSDSDTGHMELV 862
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+ L+L+ +GDFI+ GDLMRS++LL YK ++G EEI+RD+N NWMT+++IL
Sbjct: 863 SECCHRGHILVLYLQTRGDFIVAGDLMRSISLLTYKQVDGQIEEIARDFNANWMTAVDIL 922
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DD+ FLGAE +NLF +K++ ATSDE+R L+ VG HL
Sbjct: 923 DDDTFLGAEGYFNLFTVRKNTDATSDEERARLEVVGEYHL 962
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
+GSLR++RNGIGI E A ++LPGIKG+W+L D L+ SFV TRVL ++ E
Sbjct: 377 DGSLRVVRNGIGINEQAAVELPGIKGLWSLRESIDAQYDKYLIQSFVNETRVLEIADEEL 436
Query: 61 GFHLLRGF 68
+ GF
Sbjct: 437 SETEIDGF 444
>gi|395544366|ref|XP_003774082.1| PREDICTED: DNA damage-binding protein 1 [Sarcophilus harrisii]
Length = 1239
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/380 (62%), Positives = 291/380 (76%), Gaps = 14/380 (3%)
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
RVL L+G EVEETE+ GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P
Sbjct: 533 RVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEP 592
Query: 305 NGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSS 364
GK+ISV SCN +QV+ A G +YYL++H E++Q++H +E+EVACLDI+PL + S
Sbjct: 593 QGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGMS 652
Query: 365 EPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGD 424
L A+GLWTDISAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGD
Sbjct: 653 P-----LCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGD 707
Query: 425 GSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVF 484
G++FYF L +G L+D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVF
Sbjct: 708 GALFYFGLSIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVF 767
Query: 485 SNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQE 544
SNVNL++VN+MC LN++ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE
Sbjct: 768 SNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQE 827
Query: 545 SSQTFGVITTRIDIQEAD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPA 603
SQ FGV+++RI++Q+A G+T +RPSASTQA +++ S+ STA
Sbjct: 828 VSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHET 879
Query: 604 DFNMEVEVHNLLIIDQNTFE 623
F EVEVHNLLIIDQ+TFE
Sbjct: 880 SFGEEVEVHNLLIIDQHTFE 899
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 874 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 933
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 934 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 993
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 994 AEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 1053
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 1054 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 1099
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/240 (67%), Positives = 202/240 (84%)
Query: 728 RGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPE 787
R + KDLLFI+T +YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE
Sbjct: 73 RQQGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPE 132
Query: 788 ARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNG 847
R+IGLRLY+GLFK+IPL++DN ELKA +IR+EEL++ DV+FL+GCQ PTI ++QD G
Sbjct: 133 CRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELQVIDVKFLYGCQAPTICFVYQDPQG 192
Query: 848 RHVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVA 907
RHVKT+E+SL+EKEF K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A
Sbjct: 193 RHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLA 252
Query: 908 VAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+AP IIK STIVC+ +VD NG RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 253 IAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 312
Score = 243 bits (620), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 116/144 (80%), Positives = 127/144 (88%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLG
Sbjct: 275 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLG 334
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRI
Sbjct: 335 DSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRI 394
Query: 201 IRNGIGIEEHACIDLPGIKGIWAL 224
IRNGIGI EHA IDLPGIKG+W L
Sbjct: 395 IRNGIGIHEHASIDLPGIKGLWPL 418
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 41/47 (87%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFR 671
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR
Sbjct: 471 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFR 517
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 37/46 (80%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFR 728
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR
Sbjct: 472 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFR 517
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/30 (86%), Positives = 27/30 (90%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWAL 30
EGSLRIIRNGIGI EHA IDLPGIKG+W L
Sbjct: 389 EGSLRIIRNGIGIHEHASIDLPGIKGLWPL 418
>gi|357519461|ref|XP_003630019.1| DNA damage-binding protein [Medicago truncatula]
gi|355524041|gb|AET04495.1| DNA damage-binding protein [Medicago truncatula]
Length = 1171
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 250/569 (43%), Positives = 343/569 (60%), Gaps = 96/569 (16%)
Query: 81 RYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
RYLLGD G L +L++ E EK+ G K+E LGE SI ++YLDN V++GS
Sbjct: 267 RYLLGDHTGLLSLLVITHEKEKVTGL------KIEPLGETSIASTISYLDNAFVYIGSSY 320
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL+KLN PD G+YV V+E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR
Sbjct: 321 GDSQLIKLNLQPDPKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
Query: 200 IIRNGIGIEEH-----ACI-------------------------DLPGIKGIWALSIGSP 229
++RNGIGI E +C+ +L GIKG+W+L +
Sbjct: 381 VVRNGIGINEQVSPLFSCLSVGSFTQDTTKRKRFFFFLIINNTLELQGIKGMWSLRSSTD 440
Query: 230 KNLDNTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
D LV+SF+ TR+L ++ E+EETE+ GF S QT +C + ++QVT ++
Sbjct: 441 DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSNSVR 500
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQ------------------------------ 318
L+S+ ++ ++ W P+ S++V + N Q
Sbjct: 501 LVSSSTRELLNEWHAPSDYSVNVATANATQSQNHFIFQISSPSLSHGNIMICLSCKDVDN 560
Query: 319 ----------------------VLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDIS 355
VL ATG + YLE+ ++++ H LEYE++CLDI+
Sbjct: 561 WSSTSSSLSLIYRVLFLLVAASVLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDIN 620
Query: 356 PLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGH 415
P+ P ++QLAAVG+WTDIS RL SLP L + KE LGGEIIPRS+L+ FEG
Sbjct: 621 PIG-----ENPNQSQLAAVGMWTDISVRLFSLPELNLITKEHLGGEIIPRSVLLCAFEGI 675
Query: 416 CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVI 475
YLL ALGDG + F L+ ++G LTD+KKV+LGTQP L+TF S +TT+VFA SDRPTVI
Sbjct: 676 SYLLCALGDGHLLNFMLNTSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 735
Query: 476 YSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGE 535
YSSN KL++SNVNL++V+HMC N+ ++PDSLA+A + T GTID+IQKLHIRT+PLGE
Sbjct: 736 YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRTIPLGE 795
Query: 536 APRRIAYQESSQTFGVITTRIDIQEADGS 564
RRI +QE ++TF + + + + A+ S
Sbjct: 796 HARRICHQEQTRTFAICSLKYNSASAEES 824
Score = 259 bits (661), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 131/307 (42%), Positives = 205/307 (66%), Gaps = 13/307 (4%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T DLNL++AK RIEIH +T +GL+ + ++ LYG+IA ++ FR + +D LFI T+
Sbjct: 24 FTSPQDLNLILAKCTRIEIHLLTAQGLQSILDVPLYGRIATLELFRPHGETQDFLFIATE 83
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
RY +L+ D + E++T++ G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+
Sbjct: 84 RYKFCVLQW--DTEKSELVTRSMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKV 141
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKE 861
IP + +A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E++LK+K+
Sbjct: 142 IPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPKPTIVVLYQDNKDARHVKTYEVALKDKD 201
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCY 921
F + PW Q++++ A L+IPVP PL G +IIG+E+I+Y S + A+ I+++ Y
Sbjct: 202 FVEGPWSQNSLDNGADLLIPVPPPLCGVLIIGEETIVYCSANGFKAIP---IRAAITKAY 258
Query: 922 AKVDANGERYLLGDLAGRLFMLLLEKE-EKMDGTFSVKEPKVELLGEHCKGPVVEMSSLS 980
+VD +G RYLLGD G L +L++ E EK+ G K+E LGE + +
Sbjct: 259 GRVDPDGSRYLLGDHTGLLSLLVITHEKEKVTGL------KIEPLGETSIASTISYLDNA 312
Query: 981 YIKPGST 987
++ GS+
Sbjct: 313 FVYIGSS 319
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 157/220 (71%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E E+H + ++D TF+ + + L EY +IS F +D N Y+ +GTA V PEENEP
Sbjct: 823 ESEMHFVRLLDDQTFDFISVYPLDTYEYGCFIISCSFSDDNNVYYCVGTAYVLPEENEPT 882
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELR 1116
+GRI++F ++GKLQ +AEKE KGA Y + FNGKLLA+IN ++L++W +EL+
Sbjct: 883 KGRILVFSVEEGKLQLVAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLREDGTRELQ 942
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWM+++EIL
Sbjct: 943 SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 1002
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DD+++LGAENS+NLF +K+S +DE+R L+ G HL
Sbjct: 1003 DDDVYLGAENSFNLFTVRKNSEGATDEERGRLEVAGEYHL 1042
>gi|328874742|gb|EGG23107.1| UV-damaged DNA binding protein1 [Dictyostelium fasciculatum]
Length = 1116
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/481 (48%), Positives = 324/481 (67%), Gaps = 23/481 (4%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+++L GD G+L+ LLL + EK E + E LGE ++YLD+GVVF+GS L
Sbjct: 263 DKFLFGDHLGQLYFLLLSQNEK--------ELRFEKLGETCTASTISYLDSGVVFIGSAL 314
Query: 140 GDSQLVKL--NRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGS 197
GDSQL++L +R P+ N +YV+V+++F NL PI D +VD+E+QGQ Q+V CSGGFKEGS
Sbjct: 315 GDSQLIRLLSDRDPNTN-SYVTVLDTFANLGPIPDFCLVDIEKQGQNQIVACSGGFKEGS 373
Query: 198 LRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEET 257
LR+IRNGIGI E A IDLPGIK IW+L+ GS D L+LSF+ T+VL G ++EET
Sbjct: 374 LRVIRNGIGITEQASIDLPGIKAIWSLARGS----DRYLILSFISSTKVLEFQGEDIEET 429
Query: 258 EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKN 317
E+ GF T YCGNV + +LQ++ S L+ E+ W+P +G SI++ S N
Sbjct: 430 EIAGFDLQSPTLYCGNVADKQILQISTSGIYLVDHETNLNYDVWKPSSG-SINLASHQGN 488
Query: 318 QVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
Q+L + G + Y E+ +I +L +E+E++CLDIS E ++++ VGLW
Sbjct: 489 QILISFGKTLIYFEIKDQKIIKLKELEMEFEISCLDISSFQVGE------RSKICVVGLW 542
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+LSLP+LE+V KE LGGE+IPRS+LM FEG YLL +LGDG +F F +D +
Sbjct: 543 TDISLRILSLPTLEQVHKENLGGEVIPRSVLMIAFEGINYLLCSLGDGHLFNFIVDTINN 602
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
L ++KKV+LG QP +L F+ T NVFA SDRPTVIYSSN KL++S VNL+ V +CS
Sbjct: 603 TLHERKKVSLGNQPIILSKFQLKGTVNVFASSDRPTVIYSSNRKLLYSVVNLKVVVGVCS 662
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPL-GEAPRRIAYQESSQTFGVITTRI 556
++E + D +A+ATD T + G ID+IQ+LHI+ + L GE RRIA+ E+ Q + +IT R
Sbjct: 663 FDSEVFRDCIAIATDKTLSIGHIDDIQRLHIKKIDLGGEFARRIAHVEAHQCYALITIRP 722
Query: 557 D 557
D
Sbjct: 723 D 723
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 176/300 (58%), Gaps = 27/300 (9%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
NL+++K +IEI T+ PEGL P+ E +YG+I+ MK F +K++LLFI+T+R+ +L
Sbjct: 30 NLIISKCTKIEIFTLAPEGLVPILETNIYGRISNMKLFSVHGEKQELLFILTERFKYCVL 89
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
D + E++T+A G D IG+P+++G +AIIDP+++V+ L LY GL KIIP+EK
Sbjct: 90 SY--DAEKKELITRASGEADDSIGRPADSGQLAIIDPDSKVLALHLYEGLLKIIPIEKGT 147
Query: 810 FELKASSIRMEELEIQDVQFLHGCQN-PTIICIHQDV-NGRHVKTHEISLKEKEFTKTP- 866
+ A ++R++EL++ D+ F+ N PT+ + +D + ++V T+ +SLK+KE ++
Sbjct: 148 LK-TAYNVRLQELQVIDIVFIAPTNNQPTLAVLSKDTRDSKNVNTYILSLKDKELIESAN 206
Query: 867 -WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVD 925
W Q N+E AS +I G +++G+ + + S P I + I +VD
Sbjct: 207 TWAQSNVEDGASKLIA---HQNGLLVVGETLVSFLKPTSSPRTIP--IAGTRITAVGRVD 261
Query: 926 ANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
+++L GD G+L+ LLL + E KE + E LGE C S++SY+ G
Sbjct: 262 K--DKFLFGDHLGQLYFLLLSQNE--------KELRFEKLGETCTA-----STISYLDSG 306
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 128/259 (49%), Gaps = 48/259 (18%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGE--------------------- 1039
E E + + I++Q TFE + + L EY +++S+ F E
Sbjct: 731 ETEQNFIRIVNQQTFETIVKYPLKENEYGWTILSTNFKETLTSNSSSTSSSTSTTSTTST 790
Query: 1040 --------------------DPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAE 1079
+ + Y V+GT + E GRI++F D +L + E
Sbjct: 791 SGRRRLPTTTTTTTTSNDEEEQSEYIVVGTTYHCHDRKEC--GRILVFKMIDSRLILLDE 848
Query: 1080 KEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK---ELRLECSHFNNIIALFLKVKGDF 1136
++G+ + M FNG+LL +IN +V + W+ + +L E + + +L+L +GDF
Sbjct: 849 TTVRGSIFCMIAFNGQLLVAINKSVHRYTWSGDSSSGKLTGEEIYGGHTASLYLAGRGDF 908
Query: 1137 ILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKD 1196
+LVGD+M+S+ LLQ + +E+SR P W+T + +DD+ +LG++NSYNL + +K+
Sbjct: 909 VLVGDMMKSMALLQASGKD--VKELSRSSQPFWLTGLTFIDDDTYLGSDNSYNLILMKKN 966
Query: 1197 SAATSDEDRTHLQEVGTVH 1215
+ ++ D L +G +H
Sbjct: 967 TETANEVDSQLLDNIGHIH 985
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 4/59 (6%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
EGSLR+IRNGIGI E A IDLPGIK IW+L+ GS D L+LSF+ T+VL G +
Sbjct: 371 EGSLRVIRNGIGITEQASIDLPGIKAIWSLARGS----DRYLILSFISSTKVLEFQGED 425
>gi|449684814|ref|XP_004210722.1| PREDICTED: DNA damage-binding protein 1-like, partial [Hydra
magnipapillata]
Length = 725
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/408 (57%), Positives = 298/408 (73%), Gaps = 26/408 (6%)
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLE 179
SIP CLTYLDNGVVF+GS LGDSQ+VKLN PD+ G++++++ SFTNL PI+DM VVDLE
Sbjct: 2 SIPHCLTYLDNGVVFIGSCLGDSQIVKLNTEPDKKGSFITILRSFTNLGPILDMCVVDLE 61
Query: 180 RQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGS-PKNLDNTLVL 238
RQGQ QLVTCSG FK+GSLRIIRNGIGI E A IDL GI G+W L + S +L +T+VL
Sbjct: 62 RQGQDQLVTCSGAFKDGSLRIIRNGIGINELASIDLAGIMGLWCLKVNSINSDLHDTMVL 121
Query: 239 SFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARV 298
SFVG +RVL+LS EVEE E+ GF+SD+QT YC NV+ ++Q
Sbjct: 122 SFVGQSRVLSLSTEEVEEIEIEGFSSDKQTTYCANVNFNQLIQ------------KHFFF 169
Query: 299 SSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLS 358
S+W PP+ K ISV N Q++ + G ++ YLEV S IKQ++H LEYEVACLD+SP
Sbjct: 170 SNWLPPDNKHISVAVSNSFQIVVSLGKELIYLEVEDSNIKQISHTVLEYEVACLDLSPKG 229
Query: 359 NEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYL 418
+ ET+S+ VGLWTDIS R+L+LP+LEE+ E L GE+IPRSILM FE YL
Sbjct: 230 SNETTSDRL-----CVGLWTDISVRILALPNLEELYVEKLSGEMIPRSILMITFEDKEYL 284
Query: 419 LVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS 478
L ALGDGS+FYF L+ +G L+D+KKV+LGT+PTV+++F+S S+T+VFACSDRPTVIYSS
Sbjct: 285 LCALGDGSLFYFLLNRLTGVLSDQKKVSLGTKPTVIQSFKSGSSTHVFACSDRPTVIYSS 344
Query: 479 NHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKL 526
N+KLVFSNVNL++V +M LN ++YP+S F G ID I K+
Sbjct: 345 NNKLVFSNVNLKEVCYMSPLNTQAYPNS--------FYSGHIDSIYKM 384
Score = 261 bits (666), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 159/205 (77%), Gaps = 2/205 (0%)
Query: 1015 FEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKL 1074
F + H+HQ E+A SL S F DPNTY+ +GT++V+PEE+EPK+G+II+F +GKL
Sbjct: 386 FLVTHSHQFLENEWATSLTSCSFSNDPNTYYCVGTSMVYPEESEPKEGKIILFQLFEGKL 445
Query: 1075 QQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKG 1134
QI K + GA Y + FNGKLLA +NS V ++EWT++KEL+ EC + N I+AL+LK KG
Sbjct: 446 VQIGSKTVNGAVYVLQGFNGKLLAGVNSLVSVYEWTSDKELKQECCYHNTILALYLKSKG 505
Query: 1135 DFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ 1194
DFILVGDLMRS+TLL YK + G EEI+ D++PNWMT++EI+DD+ FLGAENS+NLFICQ
Sbjct: 506 DFILVGDLMRSMTLLAYKPL-GRLEEIAHDFSPNWMTAVEIIDDDTFLGAENSFNLFICQ 564
Query: 1195 KDSAATSDEDRTHLQEVGTVHLVGD 1219
KD+++ +DE+R HLQ +G HL GD
Sbjct: 565 KDNSSVNDEERHHLQTIGKYHL-GD 588
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGS-PKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLRIIRNGIGI E A IDL GI G+W L + S +L +T+VLSFVG +RVL+LS E
Sbjct: 77 DGSLRIIRNGIGINELASIDLAGIMGLWCLKVNSINSDLHDTMVLSFVGQSRVLSLSTEE 136
Query: 60 WGFHLLRGFSS 70
+ GFSS
Sbjct: 137 VEEIEIEGFSS 147
>gi|330792580|ref|XP_003284366.1| hypothetical protein DICPUDRAFT_86223 [Dictyostelium purpureum]
gi|325085712|gb|EGC39114.1| hypothetical protein DICPUDRAFT_86223 [Dictyostelium purpureum]
Length = 1064
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/494 (47%), Positives = 334/494 (67%), Gaps = 20/494 (4%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYL GD GRL +L+L ++ V E K E LG SIP ++YLD+GVVF+GS G
Sbjct: 223 RYLFGDHFGRLSVLVLLNHQQ-----RVTELKFETLGRTSIPSSISYLDSGVVFIGSSSG 277
Query: 141 DSQLVKLNRSPD-ENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
DSQL++LN D +Y+S +E+FTN+ PI+D +VD E+QGQ Q+VTCSG +++G+LR
Sbjct: 278 DSQLIRLNTEKDPATDSYISHLENFTNIGPIVDFCLVDTEKQGQAQIVTCSGTYRDGTLR 337
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKN----LDNTLVLSFVGHTRVLTLSGAEVE 255
+IRNGIGI E A I+L G+KG+W + P + D L++SF+G+T+VL G E+E
Sbjct: 338 VIRNGIGIAEKALIELEGVKGLWPIKENDPSDPLNPKDQYLIVSFIGYTKVLQFQGEEIE 397
Query: 256 ETEMGGFTSDQQTFYCGNVDPRTVL-QVTPSAAILISTESKARVSSWEPPNGKSISVVSC 314
ETE G S+ T C N+D V+ QVT A LI+ + RV W+ P+G I++VS
Sbjct: 398 ETEFEGLDSNSSTILCSNIDKENVIVQVTNQAINLINPITFKRVDQWKSPSGSPINLVSS 457
Query: 315 NKNQVLCATGCDVYYLEVH-GSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAA 373
N++Q+ + G +YY E++ S I+ + L +E++C+DISPL S +++Q+ A
Sbjct: 458 NQSQIALSIGKSLYYFEINEQSRIELIKEIELPHEISCIDISPLD----SFMDSRSQICA 513
Query: 374 VGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLD 433
VGLWTDI+ RL LP+LEE+ KEPLGGEIIPRSILM FEG Y+ +LGDG +F F +D
Sbjct: 514 VGLWTDITLRLFKLPTLEEIHKEPLGGEIIPRSILMISFEGIDYIFCSLGDGHLFKFKID 573
Query: 434 PASG-RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQV 492
A+ +L DK+K+TLGTQP +LK F+ +T N+FA SDRPTVIYS+N KL +S VNL++V
Sbjct: 574 IANNWKLFDKRKLTLGTQPIILKKFKLKNTINIFALSDRPTVIYSNNKKLFYSVVNLKEV 633
Query: 493 NHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPL-GEAPRRIAYQESSQTFGV 551
++ S N++++P S+A++++S+ GTIDEIQKLHI+T+ L GE RRI + E + V
Sbjct: 634 TNVTSFNSDAFPGSMAISSESSLIIGTIDEIQKLHIKTISLNGEMARRIVHLEEYSCYAV 693
Query: 552 ITTRI--DIQEADG 563
IT + DI +G
Sbjct: 694 ITIKTNEDIISGNG 707
Score = 186 bits (472), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 170/283 (60%), Gaps = 22/283 (7%)
Query: 707 EGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHG 766
EGL+P+ ++ +YG+I+V+K F K+D LFI T+ + IL D + EI+TKA G
Sbjct: 4 EGLKPMFDVNIYGRISVLKLFSA-GGKQDYLFISTESFKFCILAY--DSEKKEIVTKASG 60
Query: 767 NVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK---DNFELKASSIRMEELE 823
N D IG+P+E G + IIDP+ R+I L LY GL K+I +EK + + A++ R+EEL+
Sbjct: 61 NAEDTIGRPTEAGQLGIIDPDGRLIALHLYEGLLKLINIEKGLNNPIQKTAANTRLEELQ 120
Query: 824 IQDVQFLHGCQNPTIICIHQDV-NGRHVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPV 882
+ D+ FL+GC+ PTI + +D + +H+ T+E+S K++E PW Q N+ + +S+++ V
Sbjct: 121 VMDMTFLYGCKIPTIAVLFKDTKDEKHIVTYEVSQKDQELCPGPWSQSNVGVYSSMLVAV 180
Query: 883 PEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFM 942
PLGG +++ I Y +G++ ++A I + + Y +VD +G RYL GD GRL +
Sbjct: 181 --PLGGVLVVADNGITYMNGRTTRSIA---IPYTKFLAYDRVDKDGSRYLFGDHFGRLSV 235
Query: 943 LLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
L+L ++ V E K E LG SS+SY+ G
Sbjct: 236 LVLLNHQQ-----RVTELKFETLGRTSIP-----SSISYLDSG 268
Score = 117 bits (293), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 128/223 (57%), Gaps = 9/223 (4%)
Query: 1000 MEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEP 1059
+E EV + + D TFE L + +L E SL S+KF +DP TY +GT++ P+
Sbjct: 716 VEEEVSYVRLFDDQTFEPLSSFRLEHYEMGWSLTSTKFDDDPCTYLAVGTSINIPDRQ-- 773
Query: 1060 KQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKE---- 1114
GR+++F+ ++ K L + E + + +FNG+L+A++ + ++ KE
Sbjct: 774 TSGRVLLFNINEAKKLVLLEEISFRSGVLYLHQFNGRLIAAVLKRLYSIRYSYSKEKNCK 833
Query: 1115 -LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSI 1173
+ E H + + L L +G F+LVGD+M+S++LL ++ GS +I+++ P W+ SI
Sbjct: 834 VISSENVHKGHTMILKLASRGHFMLVGDMMKSMSLLG-QSENGSLVQIAKNPQPIWIRSI 892
Query: 1174 EILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++D+ F+G+E S N + +K++ +T++ +R L VG H+
Sbjct: 893 AMINDDYFIGSETSNNFVVVKKNNDSTNELERELLDSVGHYHI 935
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKN----LDNTLVLSFVGHTRVLTLS 56
+G+LR+IRNGIGI E A I+L G+KG+W + P + D L++SF+G+T+VL
Sbjct: 333 DGTLRVIRNGIGIAEKALIELEGVKGLWPIKENDPSDPLNPKDQYLIVSFIGYTKVLQFQ 392
Query: 57 G 57
G
Sbjct: 393 G 393
>gi|281208174|gb|EFA82352.1| UV-damaged DNA binding protein1 [Polysphondylium pallidum PN500]
Length = 1054
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/428 (52%), Positives = 302/428 (70%), Gaps = 16/428 (3%)
Query: 131 GVVFVGSRLGDSQLVKLNRSPDEN-GTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTC 189
GVV+VGS GDSQL++LN D N G+Y+SV++ FTNL PI D VVD+E+QGQGQLVTC
Sbjct: 274 GVVYVGSSSGDSQLIRLNSHIDPNTGSYISVIDQFTNLGPITDFCVVDVEKQGQGQLVTC 333
Query: 190 SGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT-LVLSFVGHTRVLT 248
SG F++GSLRIIRNGIGI E A I+LPGI+G+W+LS S + + L++SF+ T+VLT
Sbjct: 334 SGTFQDGSLRIIRNGIGIAEQASIELPGIRGLWSLSNNSNPSSLHRHLIVSFINSTKVLT 393
Query: 249 LSGAEVEETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILISTESKARVSSWEPPNGK 307
SG E+EETE+ GF S+ T YCGN + +Q+ S L+ + S R+ + P G
Sbjct: 394 FSGEEIEETEIAGFDSNATTLYCGNTTENNHFIQIATSGIYLVDSSSLMRLDQYTPEKG- 452
Query: 308 SISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPA 367
SI++ SCN +Q+L + G ++ YLE+ S++ L+YE++CLDIS L + +S P
Sbjct: 453 SINLASCNGSQILISQGSNLTYLEISDSKLIIKKEAQLQYEISCLDISLL--DGFTSSP- 509
Query: 368 KAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSM 427
+ AVGLWTDIS R+L LP+L EVCKE LGGEI+PRSIL FEG YLL +LGDG +
Sbjct: 510 ---VCAVGLWTDISVRILQLPNLNEVCKETLGGEILPRSILFITFEGTNYLLCSLGDGHL 566
Query: 428 FYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNV 487
F F+ D L ++KK++LGT P +L ++TNVFA SDRPTVIYS+N KL++S +
Sbjct: 567 FNFTFDVVENLLQERKKLSLGTTPILL------NSTNVFASSDRPTVIYSNNKKLLYSAI 620
Query: 488 NLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQ 547
N++ V+H+CS N+E++ DS+A+AT+S+ GTIDEIQKLHIR VPLGE RRI Y E
Sbjct: 621 NMKVVSHVCSFNSEAFRDSIAIATESSLVIGTIDEIQKLHIRNVPLGEMARRITYVEEYH 680
Query: 548 TFGVITTR 555
++ VIT +
Sbjct: 681 SYAVITIQ 688
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 154/256 (60%), Gaps = 8/256 (3%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T + NL+++K ++EI T+TPEGL PV ++ +YG+I+ M+ DK+D LFI+T++
Sbjct: 23 TSPNERNLIISKGTKLEIFTLTPEGLSPVLDVNIYGRISDMRILTATGDKQDRLFILTEK 82
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y IL + + E++T A G+ IG+P+E G I I+DPE R+IG+ LY GLF+++
Sbjct: 83 YKYCILAFNSE--SRELVTIATGDAEGTIGRPAEAGQIGIVDPECRMIGMHLYEGLFRVV 140
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDV-NGRHVKTHEISLKEKEF 862
PLE ++ S+R+E+L+I D+ FL C PT+ + +D + RH+ T+ I + KE
Sbjct: 141 PLEHGQPVRESFSMRIEQLQIVDMVFLKQCAKPTLALLFKDTRDARHIVTYSIDVVTKEL 200
Query: 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYA 922
+ QD++E +++++P+ G +I+G+ +I Y + K I + IV Y
Sbjct: 201 IEGA-SQDSVEENSTMLVPLDN--GAMLIVGEMAITYMNLKGNSQPVTISIDHTHIVAYE 257
Query: 923 KVDANGERYLLGDLAG 938
++D +R+LL D G
Sbjct: 258 QIDR--DRFLLADDCG 271
Score = 142 bits (359), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 126/209 (60%), Gaps = 2/209 (0%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFH 1068
++++ TFE + L E+ S+++ +F D Y V+GTA + E++ +GRI++F
Sbjct: 718 LLNEQTFETTSKYALKSFEFGWSIVTCRFKNDDALYVVVGTAFHNEVESQQSKGRILVFR 777
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW-TNEKELRLECSHFNNIIA 1127
+D +L + E + Y + FNG+LLA IN V+ F W + +L S+ + ++
Sbjct: 778 IEDNRLILLDEVALPACVYCLLPFNGRLLAGINKRVQAFNWGVDTNKLTKAESYSGHTLS 837
Query: 1128 LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENS 1187
+ +G F+LV DLM+S+TLL + +G+ +E++R+ P W++ IE++DDE F+G +NS
Sbjct: 838 HSMVSRGHFVLVADLMKSMTLL-VEDQQGAIKELARNPLPIWLSRIEMIDDETFIGGDNS 896
Query: 1188 YNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
YNL + QK++ A+S+ D L VG HL
Sbjct: 897 YNLIVVQKNAEASSEIDNELLDTVGQFHL 925
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT-LVLSFVGHTRVLTLSGAE 59
+GSLRIIRNGIGI E A I+LPGI+G+W+LS S + + L++SF+ T+VLT SG E
Sbjct: 339 DGSLRIIRNGIGIAEQASIELPGIRGLWSLSNNSNPSSLHRHLIVSFINSTKVLTFSGEE 398
Query: 60 WGFHLLRGFSS 70
+ GF S
Sbjct: 399 IEETEIAGFDS 409
>gi|303271531|ref|XP_003055127.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463101|gb|EEH60379.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1223
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/534 (44%), Positives = 328/534 (61%), Gaps = 68/534 (12%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLL D AGRL +L+L M V+ K+E LG+ SI L+YLDNGVV+VGS G
Sbjct: 299 RYLLSDSAGRLHLLVL-----MHDKTRVRALKLESLGQTSIASSLSYLDNGVVYVGSAYG 353
Query: 141 DSQLVKLNRSP-----------------------------DENGTYVSVMESFTNLAPII 171
DSQLV+L+ +P + YV V+ESFT+L PI+
Sbjct: 354 DSQLVRLHSTPIPIAGGGGGDGDGGGGGGGEIVPVDSGAVTDAPNYVEVLESFTSLGPIV 413
Query: 172 DMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKN 231
D VVVDL+R GQGQ+VTCSG K+GSLR++RNG+GI E A I+LPG+KG WAL
Sbjct: 414 DFVVVDLDRHGQGQVVTCSGVHKDGSLRVVRNGVGIHEQAAIELPGVKGCWALKNADDAV 473
Query: 232 LDNTLVLSFVGHTRVLTLSGA-EVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILI 290
D LV++F+G TR+L ++ E++ETE GF D++ C NVD QVT L+
Sbjct: 474 SDTFLVVAFIGETRILAINDKDELDETEFEGFAGDERALACANVDGGYACQVTSGGIRLV 533
Query: 291 STESKARVSSWEPPNGKSISVVSCNKNQVLCAT------------GCDVYYLEVHGSEIK 338
+ A + W P G+ +SV + N+ QV+ A G D ++ ++
Sbjct: 534 DVATGALRARWTPEPGERVSVAAANRTQVVVALEGGTLVSVAAGGGGDAMDVDDASPLLR 593
Query: 339 QLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPL 398
+LA + +E+ACLD++PL++ +S +++ AVGLW+ R+L+ +LEE+ PL
Sbjct: 594 ELARVNVGHEIACLDVTPLADPRAAS----SEICAVGLWS-AEVRVLATATLEELSSAPL 648
Query: 399 -GGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSL-DPASGRLTDKKKVTLGTQ------ 450
E+IPR++L+ FEG YLL LGDG +F F+L SG + D KK+++GTQ
Sbjct: 649 TDAEVIPRAVLLCSFEGIPYLLAGLGDGQLFTFALMGERSGIIGDGKKLSVGTQARSIHW 708
Query: 451 --------PTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAES 502
P LKTFR+ +TT+VFA SDRPTVIYS N KL++SNVNLR+V HMC+ N ++
Sbjct: 709 FPYDRVGVPITLKTFRNKNTTHVFAGSDRPTVIYSQNKKLIYSNVNLREVLHMCAFNCDA 768
Query: 503 YPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRI 556
+PDSLALA++S T G ID+IQKLHIRTVPLGE PRRIA+Q +S+TF V+T+ +
Sbjct: 769 FPDSLALASESELTIGGIDDIQKLHIRTVPLGEQPRRIAHQPASRTFAVLTSHV 822
Score = 226 bits (576), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 196/321 (61%), Gaps = 30/321 (9%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T +LNLVVAK R+EIH +TP+GL+ + ++ +YG+IA M+ R P +KK +LFI+T+
Sbjct: 36 FTHEDELNLVVAKCTRVEIHLLTPQGLQAMMDVPIYGRIATMELVRPPFEKKPMLFILTE 95
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
R +L D E++T+A G+++DR+G+PSE G I +DPE R+ GL LY+GLFK+
Sbjct: 96 RNMFCVLSY--DAAKGELITRAMGDLTDRVGRPSECGPIGAVDPECRMYGLHLYDGLFKV 153
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVN-GRHVKTHEISLKEKE 861
IP+++ +A S+R+EEL++ DV+FL G PTI ++QD GRH+KT+E+ LK+K+
Sbjct: 154 IPMDQTGQLREAFSVRLEELQVFDVKFLAGTPKPTIAVLYQDTKEGRHIKTYEVCLKDKD 213
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKS----------------- 904
F PW Q+++E + +I VP PLGG +++G++ I Y + ++
Sbjct: 214 FNPGPWAQNDVESGSRFLIAVPAPLGGVVVVGEKVIAYLNKETTHGVGDGGGGGGGGGGG 273
Query: 905 YVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVEL 964
+ A + +TI+ Y VD +G RYLL D AGRL +L+L M V+ K+E
Sbjct: 274 MIVKAIAMQSDATIMTYGAVDKDGSRYLLSDSAGRLHLLVL-----MHDKTRVRALKLES 328
Query: 965 LGEHCKGPVVEMSSLSYIKPG 985
LG+ SSLSY+ G
Sbjct: 329 LGQTSIA-----SSLSYLDNG 344
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 162/281 (57%), Gaps = 49/281 (17%)
Query: 985 GSTKQSTANQPADFNMEV-----------EVHNLLIIDQNTFEILHAHQLFPGEYALSLI 1033
G + A+QPA V E + + D TFE L ++L GE S+I
Sbjct: 800 GEQPRRIAHQPASRTFAVLTSHVSDVTNEESFYVRLFDDVTFETLFKYRLDVGETDSSII 859
Query: 1034 SSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFN 1093
S F +DP +Y+V+GTA PEE EP +GRI++ D+G+L +AEKE+KGA Y++ FN
Sbjct: 860 SCSFADDPASYYVVGTAFSLPEEVEPSRGRILVLRADEGRLSLVAEKEVKGAVYNLNAFN 919
Query: 1094 GKLLASINSTVRLFEWTNEK--------------------------------------EL 1115
GKLLA INS V+LF+W + EL
Sbjct: 920 GKLLAGINSKVQLFKWVSRGAGAGAGAGGGAEGGAVAMADGGGGGGGGGGAPAAATTCEL 979
Query: 1116 RLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
ECSH +I+AL++ V+GDFI+VGDLM+S++LL YK EG EE +RD+NPNWMT++
Sbjct: 980 ASECSHHGHIVALYVDVRGDFIVVGDLMKSISLLVYKPDEGVIEERARDFNPNWMTAVCA 1039
Query: 1176 LDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
LDDE +LGAENS+NLF +K+S A +DE+R+ L +G HL
Sbjct: 1040 LDDETYLGAENSFNLFTVRKNSDAAADEERSRLDVIGEYHL 1080
Score = 73.2 bits (178), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 47/62 (75%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFT +LNLVVAK R+EIH +TP+GL+ + ++ +YG+IA M+ R P +KK +LFI+T
Sbjct: 35 NFTHEDELNLVVAKCTRVEIHLLTPQGLQAMMDVPIYGRIATMELVRPPFEKKPMLFILT 94
Query: 685 QR 686
+R
Sbjct: 95 ER 96
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNG+GI E A I+LPG+KG WAL D LV++F+G TR+L ++
Sbjct: 437 DGSLRVVRNGVGIHEQAAIELPGVKGCWALKNADDAVSDTFLVVAFIGETRILAIN 492
>gi|159489018|ref|XP_001702494.1| UV-damaged DNA binding complex subunit 1 protein [Chlamydomonas
reinhardtii]
gi|158280516|gb|EDP06273.1| UV-damaged DNA binding complex subunit 1 protein [Chlamydomonas
reinhardtii]
Length = 1147
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/504 (47%), Positives = 328/504 (65%), Gaps = 36/504 (7%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD G L +L+L DG V +VE LG S P CL+YLD+G+ FVGSR G
Sbjct: 310 RYLLGDRLGGLHLLVLAH----DGAGRVSGLRVEPLGHTSTPSCLSYLDSGLTFVGSRSG 365
Query: 141 DSQLVKLNRSP-DENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
D QLV+++ +P ++ +YV +++SF NL PI+D VV+DLERQGQGQLVTCSG +GSLR
Sbjct: 366 DCQLVRISPTPVNQPPSYVELVDSFPNLGPILDFVVMDLERQGQGQLVTCSGVDGDGSLR 425
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSG-AEVEETE 258
+IRNGIGI A ++L GIKG+W+L D LVL+FVG TR+L L+ E++E E
Sbjct: 426 VIRNGIGINRQATVELAGIKGVWSLRAHYGDEHDAYLVLTFVGETRLLALNAEEELDEAE 485
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF + QT +CGN +LQVT S+ L+ + S A VS W PP G SI+V + + Q
Sbjct: 486 IPGFDAAAQTLWCGNTACDHLLQVTSSSVRLVDSSSLALVSEWRPPAGFSINVAAGSPTQ 545
Query: 319 VLCAT-GCDVYYLEVH----GSEIKQLAHRALEYEVACLDISPL---SNEETSSEPAKAQ 370
V+ AT G + YLEV G+ + ++A+ L+ EVAC+D+SPL + S+E ++
Sbjct: 546 VVVATGGGHLVYLEVQAQAGGAAVVEVANVTLDSEVACVDVSPLLLTAGPGGSAE--RSG 603
Query: 371 LAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYF 430
L AVG W D + +LL++P L + PLGGE+IPRS+L EG Y +V LGDG++ +
Sbjct: 604 LVAVGRW-DQTLQLLAVPGLTPLSVTPLGGEVIPRSVLCVGLEGVPYCMVGLGDGALHTW 662
Query: 431 SLDPASGRLTDKKKVTLGTQPTVLKTFRS-------------------LSTTNVFACSDR 471
L+PA+G LTD+K+V LGT+P L+TFR+ +VFA SDR
Sbjct: 663 RLEPATGALTDRKRVVLGTKPITLRTFRTAAAAAAAAGGDNGGARGGGGGGVSVFAASDR 722
Query: 472 PTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTV 531
PTV+YSSN KL++SN+N V H+ S +A ++P SLA+A+++ T GT D++QKLH+RTV
Sbjct: 723 PTVVYSSNRKLMYSNLNENDVAHLSSFHAAAFPHSLAVASEAALTIGTADQLQKLHVRTV 782
Query: 532 PLGEAPRRIAYQESSQTFGVITTR 555
LGE PRRIA+ E+ + GV+T R
Sbjct: 783 VLGEQPRRIAHHEAGRLLGVLTQR 806
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 184/335 (54%), Gaps = 44/335 (13%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLR------PVKEIFLYGKIAVMKFFRGPTDKKDLL 737
T D+NL+ A R+EI T+ +GL V ++ +YG ++ ++ FR + DLL
Sbjct: 37 TGPNDINLITACCTRLEIRTLGAQGLYVCVCVYAVLDVPIYGNVSSLQAFRPRDLQTDLL 96
Query: 738 FIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYN 797
FI+T++Y +L+ D +++T+++G+V+DR G+P++NG + +DP RVIGL LY+
Sbjct: 97 FILTEKYKFCVLQY--DSAKGQLVTRSNGDVADRTGRPTDNGQLGFVDPACRVIGLHLYD 154
Query: 798 GLFKIIPLEKDNFEL-KASSIRMEELEIQDVQFLHGCQN-----------------PTII 839
G+ K+IP+++ L +A ++R+EEL + D+ +L P +
Sbjct: 155 GMLKVIPMDERTGALSEAYNVRLEELCVLDMAWLAPTSKGSAAGPSGSSAAAASGRPLLC 214
Query: 840 CIHQDVNG-RHVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESIL 898
+HQD G RHVKT+E +L KE + PW+Q +++ A ++IPVP PLGG +++G+ +
Sbjct: 215 VLHQDPKGARHVKTYEAALAAKELVEGPWQQQHVDAGAGILIPVPAPLGGVVVVGENVLS 274
Query: 899 Y------HSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMD 952
Y G AP ++ + I + VD +G RYLLGD G L +L+L D
Sbjct: 275 YCGGPGAGPGGGAPVSAP--LRQTIITAWCPVDPDGSRYLLGDRLGGLHLLVLAH----D 328
Query: 953 GTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPGST 987
G V +VE LG H P S LSY+ G T
Sbjct: 329 GAGRVSGLRVEPLG-HTSTP----SCLSYLDSGLT 358
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 135/235 (57%), Gaps = 22/235 (9%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
E L ++D TF+++ ++ L PGE +S F++GT ++ P+E EP +G
Sbjct: 812 ERGQLRLLDDTTFDVVASYGLAPGEMPCGGSASAASAAGPATFIVGTVLLRPDEPEPSRG 871
Query: 1063 RIIIFHY----------DDGKLQQIAEKEIKGACYSMCEFNG-KLLASINSTVRLFEWTN 1111
RI++ Y G ++ + EKE+KGA Y++ F G K+LAS+N+ V ++ W
Sbjct: 872 RILVLEYLPGGAGGAAAGGGAVRLVTEKEVKGAAYNVRPFAGDKILASVNNKVTVYRWVV 931
Query: 1112 EK-----------ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEE 1160
+ EL EC H N++AL+L +G ++VGDLMRS++LL Y +G E
Sbjct: 932 REGSGGPGGCGAYELASECHHLGNVLALYLAARGGLVVVGDLMRSVSLLSYNAEQGVLEH 991
Query: 1161 ISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVH 1215
+ DYN W T++EILDD+ ++ A+N NL++ ++++ + +DE+R LQ VG H
Sbjct: 992 RAADYNSGWTTAVEILDDDNYIAADNHCNLYVVRRNADSATDEERARLQVVGEFH 1046
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLR+IRNGIGI A ++L GIKG+W+L D LVL+FVG TR+L L+ E
Sbjct: 421 DGSLRVIRNGIGINRQATVELAGIKGVWSLRAHYGDEHDAYLVLTFVGETRLLALNAEE 479
>gi|353232348|emb|CCD79703.1| putative dna repair protein xp-E [Schistosoma mansoni]
Length = 1329
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 247/617 (40%), Positives = 364/617 (58%), Gaps = 79/617 (12%)
Query: 79 SERYLLGDLAGRLFMLLLEKEE----KMDGT--------FSVKEPKVELLGEISIPECLT 126
++RYLLGD+AGRL+M+ L E+ +GT + ++ELLGE + PE +
Sbjct: 270 AQRYLLGDMAGRLYMVHLLSEDISAAANNGTSNSDSLSAVRIGSIRIELLGETATPESIA 329
Query: 127 YLDNGVVFVGSRLGDSQLVKLNRSPD-ENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQ 185
YLDNGVVF+GS LGDSQL++LN PD E +Y++++E++TN+ PI+DMV+ LE +GQ Q
Sbjct: 330 YLDNGVVFIGSTLGDSQLIRLNPDPDPERNSYITILETYTNIGPIVDMVL--LETKGQNQ 387
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTR 245
L+TCSG +KEGSLR+IRNGIGI EHA ID IKG W I S + D+T+V+S VG T+
Sbjct: 388 LITCSGAYKEGSLRVIRNGIGIHEHATIDQDLIKGAWCFPIESDR-FDDTIVVSMVGQTQ 446
Query: 246 VLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRT--------------------VLQVTPS 285
+L L+ ++ + GF +D+QT YC + P +LQ T S
Sbjct: 447 LLHLADDDITALHLEGFKTDEQTVYCATLSPANDSPRPESMMIDENNNTLDPLLLQATTS 506
Query: 286 AAILISTES---KARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGS----EIK 338
LI +S K ++ W+PP G+ IS +S ++ ++ A+G ++Y L+V G + +
Sbjct: 507 GLRLIGIQSLCSKGCLTEWKPPTGRGISCLSSFRHTIVVASGTELYVLKVVGESNNPKFE 566
Query: 339 QLAHRALEYEVACLDISPLSNEE----------------TSSEPAKA--QLAAVGLWTDI 380
Q++HR + +EVAC+D++P + + +SS P K+ L AVGLW
Sbjct: 567 QVSHRQMSHEVACIDLTPFNRDRAIAAINAVSSNHLDSTSSSTPDKSVPYLVAVGLWLGH 626
Query: 381 SARLLSLPSLEEVCKEPL-------GGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLD 433
LL LP+LE V +EPL G ++PRS+L+ E YL A+GDG+++++++D
Sbjct: 627 GLALLKLPNLELVHEEPLPETTASTGTALLPRSVLIAQLEDIAYLFAAMGDGTLYFYTID 686
Query: 434 PASGR--LTDKKKVTLGTQPTV-LKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLR 490
P+ L D K+V+ GT P++ L+ +RS NVF CS+ P VIYS +KL+F+N+NL+
Sbjct: 687 PSEDHVCLRDPKRVSAGTGPSMFLRQWRSQRKVNVFVCSNHPCVIYSIKNKLIFANLNLK 746
Query: 491 QVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFG 550
+VN M LN Y D +AL T + G++DEIQKLH+RT+PL E P+R+A Q + + G
Sbjct: 747 EVNFMTPLNGLFYSDCIALVTPTALIIGSVDEIQKLHVRTLPLEETPKRLALQSETSSLG 806
Query: 551 VITTRIDI-QEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEV 609
VIT R ++ QE G PVR S S S I + P + S + F E+
Sbjct: 807 VITYRQEMFQEGMGFKPVRSSIS------LSQKIPKSASRLPKTAPSSVSATERKFR-EI 859
Query: 610 EVHNLLIIDQNTFERNF 626
EV +LLI +Q+ E F
Sbjct: 860 EVSSLLIFNQSNLEIQF 876
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 169/301 (56%), Gaps = 20/301 (6%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL++ KN +E+ VT EGL+ V+++ + KI FR + D LF++T +
Sbjct: 24 TSPNDLNLLICKNTYVEVFEVTCEGLKLVRDVPINAKIVAASLFRRKDRETDSLFLLTHK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
I+EC + D++E +T A G+V DR + + G +IDP A I +RLY+GL KII
Sbjct: 84 AGVAIIECVRNNDSVEFVTVASGSVEDRSARIIDQGFDVLIDPGANYIVVRLYHGLLKII 143
Query: 804 PLEKDNFELKASSI---RMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEK 860
L+ ++ + ++EE I D+ F++G PT I++D H+KT+EI +E
Sbjct: 144 LLQCIGEKIGTDFLDTNQIEEGNIVDMAFIYGYSLPTFAMIYEDELVLHMKTYEIYGREP 203
Query: 861 EFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHS--GKSYVAVAPQIIKSSTI 918
D+IE ++ L+IPVP+P GG I++G I YH+ G PQ K+S +
Sbjct: 204 VLRNVQLTLDSIEPDSKLLIPVPKPYGGVILVGDNIICYHTKDGPHISQYIPQ-AKASQV 262
Query: 919 VCYAKVDANGERYLLGDLAGRLFMLLLEKEE----KMDGT--------FSVKEPKVELLG 966
+CYA VDA +RYLLGD+AGRL+M+ L E+ +GT + ++ELLG
Sbjct: 263 LCYAAVDA--QRYLLGDMAGRLYMVHLLSEDISAAANNGTSNSDSLSAVRIGSIRIELLG 320
Query: 967 E 967
E
Sbjct: 321 E 321
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 140/244 (57%), Gaps = 13/244 (5%)
Query: 972 PVVEMSSLSYIKPGSTKQSTANQPADFNM------EVEVHNLLIIDQNTFEILHAHQLFP 1025
PV SLS P S + P+ + E+EV +LLI +Q+ EI AH +
Sbjct: 823 PVRSSISLSQKIPKSASRLPKTAPSSVSATERKFREIEVSSLLIFNQSNLEIQFAHNFYF 882
Query: 1026 G----EYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYD--DGKLQQIAE 1079
E A+S+ S + F +GTA + +E EP +GRI +F +D +L +
Sbjct: 883 SQTLVEVAVSIASVQSDIHNGPLFAVGTAFLVEDEVEPSKGRIHLFRWDPESSRLDTVLV 942
Query: 1080 KEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILV 1139
++ G+ Y + +FNG+LLA+INS+VRLF+ E LRL CS NII LFL+ KGDF+LV
Sbjct: 943 HDVNGSVYRIVDFNGRLLAAINSSVRLFD-IKEDSLRLACSFNENIIVLFLRRKGDFVLV 1001
Query: 1140 GDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAA 1199
GDLMRSLTLL +K+ +FE I R +P W T IEILDDE FL AE NLF+ +D
Sbjct: 1002 GDLMRSLTLLLFKSNVNNFEAIGRHRHPRWTTCIEILDDEHFLAAEVENNLFVVSRDLPE 1061
Query: 1200 TSDE 1203
+ E
Sbjct: 1062 NTKE 1065
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLR+IRNGIGI EHA ID IKG W I S + D+T+V+S VG T++L L+ +
Sbjct: 397 EGSLRVIRNGIGIHEHATIDQDLIKGAWCFPIESDR-FDDTIVVSMVGQTQLLHLADDDI 455
Query: 61 GFHLLRGFSS 70
L GF +
Sbjct: 456 TALHLEGFKT 465
>gi|256088964|ref|XP_002580590.1| DNA repair protein xp-E [Schistosoma mansoni]
Length = 1329
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 247/617 (40%), Positives = 364/617 (58%), Gaps = 79/617 (12%)
Query: 79 SERYLLGDLAGRLFMLLLEKEE----KMDGT--------FSVKEPKVELLGEISIPECLT 126
++RYLLGD+AGRL+M+ L E+ +GT + ++ELLGE + PE +
Sbjct: 270 AQRYLLGDMAGRLYMVHLLSEDISAAANNGTSNSDSLSAVRIGSIRIELLGETATPESIA 329
Query: 127 YLDNGVVFVGSRLGDSQLVKLNRSPD-ENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQ 185
YLDNGVVF+GS LGDSQL++LN PD E +Y++++E++TN+ PI+DMV+ LE +GQ Q
Sbjct: 330 YLDNGVVFIGSTLGDSQLIRLNPDPDPERNSYITILETYTNIGPIVDMVL--LETKGQNQ 387
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTR 245
L+TCSG +KEGSLR+IRNGIGI EHA ID IKG W I S + D+T+V+S VG T+
Sbjct: 388 LITCSGAYKEGSLRVIRNGIGIHEHATIDQDLIKGAWCFPIESDR-FDDTIVVSMVGQTQ 446
Query: 246 VLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRT--------------------VLQVTPS 285
+L L+ ++ + GF +D+QT YC + P +LQ T S
Sbjct: 447 LLHLADDDITALHLEGFKTDEQTVYCATLSPANDSPRPESMMIDENNNTLDPLLLQATTS 506
Query: 286 AAILISTES---KARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGS----EIK 338
LI +S K ++ W+PP G+ IS +S ++ ++ A+G ++Y L+V G + +
Sbjct: 507 GLRLIGIQSLCSKGCLTEWKPPTGRGISCLSSFRHTIVVASGTELYVLKVVGESNNPKFE 566
Query: 339 QLAHRALEYEVACLDISPLSNEE----------------TSSEPAKA--QLAAVGLWTDI 380
Q++HR + +EVAC+D++P + + +SS P K+ L AVGLW
Sbjct: 567 QVSHRQMSHEVACIDLTPFNRDRAIAAINAVSSNHLDSTSSSTPDKSVPYLVAVGLWLGH 626
Query: 381 SARLLSLPSLEEVCKEPL-------GGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLD 433
LL LP+LE V +EPL G ++PRS+L+ E YL A+GDG+++++++D
Sbjct: 627 GLALLKLPNLELVHEEPLPETTASTGTALLPRSVLIAQLEDIAYLFAAMGDGTLYFYTID 686
Query: 434 PASGR--LTDKKKVTLGTQPTV-LKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLR 490
P+ L D K+V+ GT P++ L+ +RS NVF CS+ P VIYS +KL+F+N+NL+
Sbjct: 687 PSEDHVCLRDPKRVSAGTGPSMFLRQWRSQRKVNVFVCSNHPCVIYSIKNKLIFANLNLK 746
Query: 491 QVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFG 550
+VN M LN Y D +AL T + G++DEIQKLH+RT+PL E P+R+A Q + + G
Sbjct: 747 EVNFMTPLNGLFYSDCIALVTPTALIIGSVDEIQKLHVRTLPLEETPKRLALQSETSSLG 806
Query: 551 VITTRIDI-QEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEV 609
VIT R ++ QE G PVR S S S I + P + S + F E+
Sbjct: 807 VITYRQEMFQEGMGFKPVRSSIS------LSQKIPKSASRLPKTAPSSVSATERKFR-EI 859
Query: 610 EVHNLLIIDQNTFERNF 626
EV +LLI +Q+ E F
Sbjct: 860 EVSSLLIFNQSNLEIQF 876
Score = 179 bits (455), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 169/301 (56%), Gaps = 20/301 (6%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL++ KN +E+ VT EGL+ V+++ + KI FR + D LF++T +
Sbjct: 24 TSPNDLNLLICKNTYVEVFEVTCEGLKLVRDVPINAKIVAASLFRRKDRETDSLFLLTHK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
I+EC + D++E +T A G+V DR + + G +IDP A I +RLY+GL KII
Sbjct: 84 AGVAIIECVRNNDSVEFVTVASGSVEDRSARIIDQGFDVLIDPGANYIVVRLYHGLLKII 143
Query: 804 PLEKDNFELKASSI---RMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEK 860
L+ ++ + ++EE I D+ F++G PT I++D H+KT+EI +E
Sbjct: 144 LLQCIGEKIGTDFLDTNQIEEGNIVDMAFIYGYSLPTFAMIYEDELVLHMKTYEIYGREP 203
Query: 861 EFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHS--GKSYVAVAPQIIKSSTI 918
D+IE ++ L+IPVP+P GG I++G I YH+ G PQ K+S +
Sbjct: 204 VLRNVQLTLDSIEPDSKLLIPVPKPYGGVILVGDNIICYHTKDGPHISQYIPQ-AKASQV 262
Query: 919 VCYAKVDANGERYLLGDLAGRLFMLLLEKEE----KMDGT--------FSVKEPKVELLG 966
+CYA VDA +RYLLGD+AGRL+M+ L E+ +GT + ++ELLG
Sbjct: 263 LCYAAVDA--QRYLLGDMAGRLYMVHLLSEDISAAANNGTSNSDSLSAVRIGSIRIELLG 320
Query: 967 E 967
E
Sbjct: 321 E 321
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 138/237 (58%), Gaps = 13/237 (5%)
Query: 972 PVVEMSSLSYIKPGSTKQSTANQPADFNM------EVEVHNLLIIDQNTFEILHAHQLFP 1025
PV SLS P S + P+ + E+EV +LLI +Q+ EI AH +
Sbjct: 823 PVRSSISLSQKIPKSASRLPKTAPSSVSATERKFREIEVSSLLIFNQSNLEIQFAHNFYF 882
Query: 1026 G----EYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYD--DGKLQQIAE 1079
E A+S+ S + F +GTA + +E EP +GRI +F +D +L +
Sbjct: 883 SQTLVEVAVSIASVQSDIHNGPLFAVGTAFLVEDEVEPSKGRIHLFRWDPESSRLDTVLV 942
Query: 1080 KEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILV 1139
++ G+ Y + +FNG+LLA+INS+VRLF+ E LRL CS NII LFL+ KGDF+LV
Sbjct: 943 HDVNGSVYRIVDFNGRLLAAINSSVRLFD-IKEDSLRLACSFNENIIVLFLRRKGDFVLV 1001
Query: 1140 GDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKD 1196
GDLMRSLTLL +K+ +FE I R +P W T IEILDDE FL AE NLF+ +D
Sbjct: 1002 GDLMRSLTLLLFKSNVNNFEAIGRHRHPRWTTCIEILDDEHFLAAEVENNLFVVSRD 1058
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLR+IRNGIGI EHA ID IKG W I S + D+T+V+S VG T++L L+ +
Sbjct: 397 EGSLRVIRNGIGIHEHATIDQDLIKGAWCFPIESDR-FDDTIVVSMVGQTQLLHLADDDI 455
Query: 61 GFHLLRGFSS 70
L GF +
Sbjct: 456 TALHLEGFKT 465
>gi|393905247|gb|EJD73911.1| CPSF A subunit region family protein [Loa loa]
Length = 1145
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 255/554 (46%), Positives = 349/554 (62%), Gaps = 33/554 (5%)
Query: 80 ERYLLGDLAGRLFMLLLE----KEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFV 135
+RYLL DLAG L+MLLLE +E+ T SVK+ KVE LG I EC+ YLDNGV F+
Sbjct: 268 QRYLLADLAGNLYMLLLEFGKGQEQDESSTVSVKDMKVESLGNTCIAECMCYLDNGVCFI 327
Query: 136 GSRLGDSQLVKLNRSPDENGT-YVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFK 194
GSR GDSQL++L+ P +GT Y+S+++S+TNLAPI DM V + GQ Q++TCSG +K
Sbjct: 328 GSRFGDSQLIRLSTEPRADGTGYISLLDSYTNLAPIRDMTV--MRCNGQQQILTCSGAYK 385
Query: 195 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEV 254
+G++RIIRNGIGIEE A ++L GIK ++ L D+ L+LSF T VL ++G E+
Sbjct: 386 DGTIRIIRNGIGIEELASVELKGIKNMFTLRT-RDHEFDDYLILSFDSDTHVLLINGEEL 444
Query: 255 EETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVS 313
E+T++ GF D T + G + T+LQVT ILI ++ + W+ K I++V+
Sbjct: 445 EDTQITGFVVDGATLWAGCLFQSTTILQVTHGEVILIDGDN---IQIWKA--SKWITLVA 499
Query: 314 CNK--NQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQL 371
N+ Q++ A G + YLE + K ++ E+E++C+DI+P+ NE SE +
Sbjct: 500 VNEITGQLVIACGALLIYLEADSAGFKLISELECEFEISCIDITPIGNETLRSE-----I 554
Query: 372 AAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFS 431
AVG WTD+S L +LP L EV +E + G+++ RSI+++ EGH YLLVALGDG++ YF
Sbjct: 555 CAVGYWTDLSVALRTLPQLMEVVREKIPGDMLSRSIMLSPMEGHVYLLVALGDGTVHYFQ 614
Query: 432 LDPASGRLTDKKKVTLGTQPTVLKTFRSL--STTNVFACSDRPTVIYSSNHKLVFSNVNL 489
+D +G L D KK TLGTQP L+ FRS S N+F CSDRP VIYSSN KL+FSNVNL
Sbjct: 615 IDMKTGALLDPKKATLGTQPIHLRKFRSRCSSVHNIFVCSDRPAVIYSSNQKLLFSNVNL 674
Query: 490 RQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTF 549
R V+ M L AE+YPD+L L ++ G ID+IQKLHIRTVPLGE+P RIAYQ + T
Sbjct: 675 RMVSTMTPLYAEAYPDALVLTDGNSLVIGRIDDIQKLHIRTVPLGESPSRIAYQPETNTI 734
Query: 550 GVITTRIDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEV 609
V R++ +A G AS A T+SS + P E+
Sbjct: 735 AVTVERLEFVDAMGKHHFGQCASKNAMETSSSR----------LSSMRREPTPECLAEEM 784
Query: 610 EVHNLLIIDQNTFE 623
EV ++L++D NTFE
Sbjct: 785 EVSSILLLDSNTFE 798
Score = 252 bits (644), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 124/257 (48%), Positives = 174/257 (67%), Gaps = 2/257 (0%)
Query: 962 VELLGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAH 1021
V+ +G+H G +++ + P E+EV ++L++D NTFEILH+H
Sbjct: 744 VDAMGKHHFGQCASKNAMETSSSRLSSMRREPTPECLAEEMEVSSILLLDSNTFEILHSH 803
Query: 1022 QLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDG--KLQQIAE 1079
+L E A+SL S + G D YFV+GTAV+ +E E K GRI++F +G +++ + E
Sbjct: 804 ELEGSEMAMSLASCQLGNDSQPYFVVGTAVIMSDETESKMGRIMMFQASEGPERMRLVYE 863
Query: 1080 KEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILV 1139
KEIKGA YS+ +GKL+ ++NS VRLFEWT +KELRLECS F+N+ AL+LK K D ILV
Sbjct: 864 KEIKGAAYSIQSMDGKLVVAVNSCVRLFEWTADKELRLECSDFDNVTALYLKTKNDLILV 923
Query: 1140 GDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAA 1199
GDLMRSL+LL YK++E +FE+++RD+ NWM++ EI+D + FLGAENSYNLF KDS
Sbjct: 924 GDLMRSLSLLSYKSVESTFEKVARDFMTNWMSACEIIDSDSFLGAENSYNLFTVVKDSFT 983
Query: 1200 TSDEDRTHLQEVGTVHL 1216
E+ T LQE+G +L
Sbjct: 984 VFKEEGTRLQELGLFYL 1000
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 183/291 (62%), Gaps = 13/291 (4%)
Query: 687 TDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNA 746
T+LNLV+AK NR+E+ VTPEGL+P +E ++G+IA +K FR P + D L I+T +Y+
Sbjct: 27 TELNLVLAKTNRVELFLVTPEGLKPHRECPVFGRIATIKLFRAPGEDVDSLLILTAKYHL 86
Query: 747 MILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE 806
I+ E+ T+A G++ DR+G+PSE G+IA + ++ RLY+GL K++
Sbjct: 87 AIIRW---TPTSELRTRASGHIVDRVGRPSETGMIATVHSSGLMV-FRLYDGLLKVVQWN 142
Query: 807 KDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTP 866
+ +L+ ++R ++L I D+ F+ PT+ I+QD NGRH+K +++++KE +
Sbjct: 143 EGK-DLRGFNVRCDDLYIIDITFMSDPDRPTLAYIYQDDNGRHIKVVTLNIEDKELSSPL 201
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKS----YVAVAPQIIKSSTIVCYA 922
WK DN+E EAS+VI VPEP GG +I G ++I YH G Y V + ++ CYA
Sbjct: 202 WKHDNLEGEASMVIGVPEPAGGCLIAGPDAISYHKGGDDALRYAGVPGSRLHNTHPNCYA 261
Query: 923 KVDANGERYLLGDLAGRLFMLLLE----KEEKMDGTFSVKEPKVELLGEHC 969
VD +G+RYLL DLAG L+MLLLE +E+ T SVK+ KVE LG C
Sbjct: 262 PVDRDGQRYLLADLAGNLYMLLLEFGKGQEQDESSTVSVKDMKVESLGNTC 312
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+F T+LNLV+AK NR+E+ VTPEGL+P +E ++G+IA +K FR P + D L I+T
Sbjct: 22 SFIVPTELNLVLAKTNRVELFLVTPEGLKPHRECPVFGRIATIKLFRAPGEDVDSLLILT 81
Query: 685 QRTDLNLV 692
+ L ++
Sbjct: 82 AKYHLAII 89
>gi|255080490|ref|XP_002503825.1| predicted protein [Micromonas sp. RCC299]
gi|226519092|gb|ACO65083.1| predicted protein [Micromonas sp. RCC299]
Length = 1114
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/497 (47%), Positives = 317/497 (63%), Gaps = 30/497 (6%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLL D G L +L+L + + V K+E LG+ SI L+YLDNGVV+VGS G
Sbjct: 270 RYLLSDSTGMLHLLVLVHDRR-----RVHALKLESLGQTSIASTLSYLDNGVVYVGSAYG 324
Query: 141 DSQLVKLNRSP-----------DENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTC 189
DSQLV+L+ P + TYV +ESFTNL PI+D VVDL+R GQGQ+VTC
Sbjct: 325 DSQLVRLHAQPVRCAADQVPATPDGLTYVECLESFTNLGPIVDFAVVDLDRHGQGQVVTC 384
Query: 190 SGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIG--SPKNLDNTLVLSFVGHTRVL 247
SG K+GSLR++RNG+GI E A I+LPG+KG W+L G S D LV+SF G TR+L
Sbjct: 385 SGVNKDGSLRVVRNGVGIHERAAIELPGVKGCWSLRRGDASTHPSDTHLVVSFAGETRIL 444
Query: 248 TLSGA-EVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNG 306
+ E+ E E GF++++QT NVD V+Q S L++ ++W PP G
Sbjct: 445 AIDDDDELAECEFRGFSANEQTLCVCNVDGGFVVQCVASGVRLVNAADGEPRATWSPPGG 504
Query: 307 KSISVVSCNKNQVLCAT-GCDVYYLEVHGSE-IKQLAHRALE-YEVACLDISPLSNEETS 363
++SV S N+ Q L AT G +Y L + + I++ A +L+ E+ACLD +PLS+
Sbjct: 505 ATVSVASANRTQALVATTGGSLYSLALGSAALIRETASASLDGKEIACLDCTPLSDPGD- 563
Query: 364 SEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGE---IIPRSILMTCFEGHCYLLV 420
A A+L AVG WT LL++P L V PLGG +IPR++L+ FEG +LL
Sbjct: 564 ---AAARLCAVGTWT-AEVFLLTMPDLRLVTTSPLGGGGGGVIPRAVLLCSFEGTPHLLA 619
Query: 421 ALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNH 480
LGDG++ F +DP +G L D K ++LGTQP L+TFRS T+VFA SDRPTVIY +N
Sbjct: 620 GLGDGALHTFGVDPEAGTLRDGKSLSLGTQPITLRTFRSKGATHVFAGSDRPTVIYGNNG 679
Query: 481 KLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRI 540
KL++SNVNLR+V H C N +++PDSLALA++S T G ID+IQKLHIRTVPLGE PRRI
Sbjct: 680 KLIYSNVNLREVLHACPFNCDAFPDSLALASESDLTIGGIDDIQKLHIRTVPLGEQPRRI 739
Query: 541 AYQESSQTFGVITTRID 557
A+Q ++T+ +T D
Sbjct: 740 AHQPETRTYAALTENFD 756
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 191/305 (62%), Gaps = 14/305 (4%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T +LNL+VAK RIEIH +TP+GL+P+ ++ +YG+IAVMK +R +K+ LL++ T+
Sbjct: 23 FTHDNELNLIVAKCTRIEIHMLTPDGLQPMHDVPVYGRIAVMKLYRPAGEKRQLLYVATE 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
R +L D + I T+A G++S+ IG+P E+G+I +DPE R+IG + Y+GLFK+
Sbjct: 83 RLMFCVLAY--DQTSGAIATRAMGDLSNTIGRPCEHGLIGEVDPECRLIGSQAYDGLFKV 140
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVN-GRHVKTHEISLKEKE 861
+P+++ +A +R+EEL + DV+F+HGC PTI +++D RHVKT+E+ +KEK
Sbjct: 141 VPMDRAGQLREAFDVRLEELNVVDVKFMHGCATPTICVLYEDTKEARHVKTYEVDVKEKT 200
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILY-HSGKSYVAVAPQIIKSSTIVC 920
PW Q ++E +SL+IPVP PLGGAI++G+ I+Y + A KS ++
Sbjct: 201 LRDGPWSQSDVEGGSSLIIPVPAPLGGAIVVGESVIVYLNKDGGNGAGGAIATKSVNVMA 260
Query: 921 YAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLS 980
+ VDA+G RYLL D G L +L+L + + V K+E LG+ S+LS
Sbjct: 261 HGVVDADGSRYLLSDSTGMLHLLVLVHDRR-----RVHALKLESLGQTSIA-----STLS 310
Query: 981 YIKPG 985
Y+ G
Sbjct: 311 YLDNG 315
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 148/218 (67%), Gaps = 10/218 (4%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFH 1068
+ D TFE L +L P E S+IS F +DP Y+V+GT PEE EP +GRI++F
Sbjct: 764 LFDDVTFETLCKFRLEPDEQDSSVISCAFADDPRVYYVVGTGYSLPEEPEPTRGRILVFR 823
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTN----------EKELRLE 1118
+DGKLQ +AEKE+KGA Y++ FNGKLLA INS V LF + EL E
Sbjct: 824 AEDGKLQLVAEKEVKGAVYNLNAFNGKLLAGINSKVELFRGGDPVGADGAGGSTYELAKE 883
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
CSH +I+AL++ V+G+FI+VGDLM+S++LL YK E EE +RDYN NWMT+++ILDD
Sbjct: 884 CSHHGHIVALYVAVRGEFIVVGDLMKSVSLLAYKPEESVIEERARDYNANWMTAVDILDD 943
Query: 1179 ELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+ +LGAEN++NLF ++ S A +DE+R+ L+ VG H+
Sbjct: 944 DTYLGAENNFNLFTLRRQSDAATDEERSRLEVVGEYHV 981
Score = 66.6 bits (161), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 9/76 (11%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIG--SPKNLDNTLVLSFVGHTRVLTLSG- 57
+GSLR++RNG+GI E A I+LPG+KG W+L G S D LV+SF G TR+L +
Sbjct: 390 DGSLRVVRNGVGIHERAAIELPGVKGCWSLRRGDASTHPSDTHLVVSFAGETRILAIDDD 449
Query: 58 ---AEWGFHLLRGFSS 70
AE F RGFS+
Sbjct: 450 DELAECEF---RGFSA 462
>gi|90108802|pdb|2B5N|A Chain A, Crystal Structure Of The Ddb1 Bpb Domain
gi|90108803|pdb|2B5N|B Chain B, Crystal Structure Of The Ddb1 Bpb Domain
gi|90108804|pdb|2B5N|C Chain C, Crystal Structure Of The Ddb1 Bpb Domain
gi|90108805|pdb|2B5N|D Chain D, Crystal Structure Of The Ddb1 Bpb Domain
Length = 323
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 254/325 (78%), Gaps = 5/325 (1%)
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
+RNGIGI EHA IDLPGIKG+W L + +TLVLSFVG TRVL L+G EVEETE+
Sbjct: 4 MRNGIGIHEHASIDLPGIKGLWPLRSDPNRETYDTLVLSFVGQTRVLMLNGEEVEETELM 63
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
GF DQQTF+CGNV + ++Q+T ++ L+S E KA VS W+ P K+ISV SCN +QV+
Sbjct: 64 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 123
Query: 321 CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
A G +YYL++H E++Q++H +E+EVACLDI+PL + S L A+GLWTDI
Sbjct: 124 VAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSP-----LCAIGLWTDI 178
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440
SAR+L LPS E + KE LGGEIIPRSILMT FE YLL ALGDG++FYF L+ +G L+
Sbjct: 179 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 238
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL++VN+MC LN+
Sbjct: 239 DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS 298
Query: 501 ESYPDSLALATDSTFTFGTIDEIQK 525
+ YPDSLALA +ST T GTIDEIQK
Sbjct: 299 DGYPDSLALANNSTLTIGTIDEIQK 323
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 42/62 (67%)
Query: 7 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEWGFHLLR 66
+RNGIGI EHA IDLPGIKG+W L + +TLVLSFVG TRVL L+G E L
Sbjct: 4 MRNGIGIHEHASIDLPGIKGLWPLRSDPNRETYDTLVLSFVGQTRVLMLNGEEVEETELM 63
Query: 67 GF 68
GF
Sbjct: 64 GF 65
>gi|145351726|ref|XP_001420218.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580451|gb|ABO98511.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1120
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/482 (46%), Positives = 310/482 (64%), Gaps = 24/482 (4%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD G L++L++ + K V+E K+E LG+ SI L+YLDNGVVFVGS G
Sbjct: 291 RYLLGDADGMLYLLVILHDGK-----RVRELKIERLGDTSIASTLSYLDNGVVFVGSTYG 345
Query: 141 DSQLVKLNR-----SPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKE 195
DSQL+KL+ D N TYV ++E FTNL PI+D VDLER GQGQ+VTCSG K+
Sbjct: 346 DSQLIKLHAEKTSIDKDGNPTYVQILEEFTNLGPIVDFAFVDLERHGQGQVVTCSGALKD 405
Query: 196 GSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE-- 253
GSLR++RNGIGI+E A I LPG+KG+++L +D LV++F+ TR+L G E
Sbjct: 406 GSLRVVRNGIGIDEQAVIQLPGVKGLFSLRDSDDSQMDKYLVVTFINETRILGFVGDEGD 465
Query: 254 -VEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVV 312
++ETE+ GF ++ QT CGN+ LQVT L+S + W+P +G I
Sbjct: 466 TLDETEIAGFDAEAQTLCCGNMQGNVFLQVTHRGVRLVSRGGDL-LDEWKPKDGAEILSA 524
Query: 313 SCNKNQVL-CATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQL 371
CN Q+L A G ++ L V +I LA + E E+ACLD +P+ + +S +
Sbjct: 525 KCNPTQILVAAAGGQLHCLNVAKGKIVLLASKTFENEIACLDCTPMGDGMSSP------V 578
Query: 372 AAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFS 431
AVGLW+ + L S+ L + KE +IIPRS L+ FE YL V LGDG + +
Sbjct: 579 CAVGLWS-MDIVLASMSDLSVITKESTDEDIIPRSTLLCSFEDIPYLFVGLGDGQLITYV 637
Query: 432 LDPASGRLTDKKKVTLGTQPTVLKTFRSLST--TNVFACSDRPTVIYSSNHKLVFSNVNL 489
LD +G L+ +KK++LGT+P L+TF+S +T ++VFA SDRPTVI+S+N KL++SNVN+
Sbjct: 638 LDQNTGALSGRKKLSLGTKPITLQTFKSHATNVSSVFAASDRPTVIFSNNKKLIYSNVNV 697
Query: 490 RQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTF 549
++V H+C ++E++PD+LALA D T G ID+IQKLHIRT+PLG PRRIA+Q + TF
Sbjct: 698 QEVLHVCPFSSEAFPDALALAGDEDLTIGGIDDIQKLHIRTIPLGGHPRRIAHQVDTNTF 757
Query: 550 GV 551
V
Sbjct: 758 AV 759
Score = 226 bits (577), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 194/314 (61%), Gaps = 23/314 (7%)
Query: 681 FIITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFR-GPTDKKDLLFI 739
F ++ TDL +VAK+ R+E++ + EGL+PV ++ + G+IA M + G D K L++
Sbjct: 37 FTSSEATDL--IVAKSTRLEVYRLHAEGLKPVLDVPINGRIATMSLCQTGSGDGKARLYL 94
Query: 740 ITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGL 799
T+RY +L D N E+ T+A G+V D IG+P+++G I I+D R IGLRLY+GL
Sbjct: 95 TTERYGFTVLSY--DEANEELKTEAFGDVQDNIGRPADDGQIGIVDDTCRAIGLRLYDGL 152
Query: 800 FKIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDV-NGRHVKTHEISLK 858
FK+IP ++ +A +IR+EEL ++D++FLHG PTI +++D + H+KT+EI ++
Sbjct: 153 FKVIPCDEKGGVKEAFNIRLEELRVEDIKFLHGTPKPTIAVLYRDTKDAVHIKTYEIGIR 212
Query: 859 EKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILY-----HSGKSYVAV--APQ 911
EKEF +PW Q+++E ++ +IPVP P+GG +++GQE I+Y ++ P
Sbjct: 213 EKEFVSSPWAQNDLEGGSNKIIPVPAPIGGVVVLGQEIIVYLNKFEDDADVFLKAINIPN 272
Query: 912 IIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKG 971
I + I CY +D +G RYLLGD G L++L++ + K V+E K+E LG+
Sbjct: 273 IPDRTNITCYGAIDPDGSRYLLGDADGMLYLLVILHDGK-----RVRELKIERLGDTSIA 327
Query: 972 PVVEMSSLSYIKPG 985
S+LSY+ G
Sbjct: 328 -----STLSYLDNG 336
Score = 204 bits (519), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 143/213 (67%), Gaps = 5/213 (2%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFH 1068
+ID +F+ LH +L E A SL+S F D Y+V+GT + +E+EP +GRI++
Sbjct: 776 LIDDGSFDTLHQFRLEEHELASSLMSCSFAGDSREYYVVGTGFAYEQEDEPSRGRILVLR 835
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELRLECSHFNN 1124
+ L+ ++EKE++GA Y++ F GKLLA INS + LF+WT + EL ECSH
Sbjct: 836 VEADALELVSEKEVRGAVYNLNAFKGKLLAGINSKLELFKWTPREDDAHELVSECSHHGQ 895
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL-DDELFLG 1183
II +K +GD+ILVGDL++S++LLQYK EG+ +EI+RD+N NWMT++ +L DDE +LG
Sbjct: 896 IITFSVKTRGDWILVGDLLKSMSLLQYKPEEGAIDEIARDFNANWMTAVAMLDDDETYLG 955
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
AENS NLF ++ A +DE+R+ L+ G HL
Sbjct: 956 AENSLNLFTVARNMNAMTDEERSRLEITGEYHL 988
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLR++RNGIGI+E A I LPG+KG+++L +D LV++F+ TR+L G E
Sbjct: 405 DGSLRVVRNGIGIDEQAVIQLPGVKGLFSLRDSDDSQMDKYLVVTFINETRILGFVGDE 463
>gi|348681092|gb|EGZ20908.1| hypothetical protein PHYSODRAFT_259403 [Phytophthora sojae]
Length = 1137
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/496 (45%), Positives = 316/496 (63%), Gaps = 22/496 (4%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R+LL D G L ++ L+ K V +E+LGE +I CL+YLDNGVVF+GS G
Sbjct: 267 RFLLADQYGTLSVVALQHTGK-----EVTGVHLEVLGETNIASCLSYLDNGVVFIGSTFG 321
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KLN DENG+Y+ V++++ N+ PIID V+DL+RQGQGQ+VTCSG K+G+LR+
Sbjct: 322 DSQLIKLNADRDENGSYIEVLDTYVNVGPIIDFCVMDLDRQGQGQIVTCSGADKDGTLRV 381
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGA-EVEETEM 259
IRNGIGI E A +LPGIKG+WAL D L+ S+V R+L + E+EE E+
Sbjct: 382 IRNGIGINEQASAELPGIKGMWALRETFAAEHDKYLLQSYVSEIRILAIGDEDEMEEKEI 441
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
FT + +T C N+ LQVT S LIS S + S+W PP G I+V + N QV
Sbjct: 442 PAFT-NVKTLLCRNMYGDVWLQVTESEVRLISCTSLSLSSTWSPPLGSRITVAAANPTQV 500
Query: 320 LCAT-GCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSS-------------- 364
AT G + YLEV ++ + +E+E+AC+DI+PL+ + +
Sbjct: 501 AVATSGGVLVYLEVENGQVTEKTKVKMEHEIACVDITPLARSQATDGDVAMTGSSTHWDM 560
Query: 365 EPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGD 424
+ + VGLWT+ S +L LP+LE++ E LG +++PRS+L FEG YLLV LGD
Sbjct: 561 AALNSSICVVGLWTNFSVSVLKLPTLEKLTTESLGTDLLPRSVLCNTFEGKDYLLVGLGD 620
Query: 425 GSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVF 484
GS+ + L+ A G L +K+V+LG+QP L TFRS + T+VFA DRPTVIYSSN+KL++
Sbjct: 621 GSLMNYELNVAQGTLGTRKRVSLGSQPLSLSTFRSKNMTHVFAACDRPTVIYSSNNKLLY 680
Query: 485 SNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQE 544
SN+N ++VN MC ++ES+P+ LAL+++ T GT+D+IQKLHI+T L E RRIA+
Sbjct: 681 SNINSKEVNVMCPFDSESFPECLALSSEEELTIGTVDDIQKLHIQTFHLNEWARRIAHDP 740
Query: 545 SSQTFGVITTRIDIQE 560
S T GV+T + +
Sbjct: 741 ESHTLGVLTVSFTVDD 756
Score = 234 bits (598), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 186/305 (60%), Gaps = 17/305 (5%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T D NL++AK+ R E+H +TPEGL P ++ LYG+IA+ + FR + +D LFI+TQ
Sbjct: 23 FTGPNDTNLLLAKSTRFEVHLLTPEGLSPQHDVNLYGRIAIFEVFRALNEPQDWLFIVTQ 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
R+ +L D + +TKAHG++ D IG+ SE IDPE R+IG+ LY G FK+
Sbjct: 83 RFQFCVLAY--DAAAQQFVTKAHGSIRDSIGRSSEIVTSGNIDPEGRLIGMNLYEGYFKV 140
Query: 803 IPLEKDNFELKAS-SIRMEELEIQDVQFLHGCQNPTIICIHQDVNG-RHVKTHEISLKEK 860
IP++ LK + +IR++EL + D++FLHG PTI +++D RH+KT+ I LKEK
Sbjct: 141 IPIDSGKGILKDTFNIRLDELRVIDIKFLHGYTKPTICVLYEDYKAARHIKTYHILLKEK 200
Query: 861 EFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVC 920
+F + PW Q N+E ASL+IPVP P+GG +I+ ++I+YH+G ++ A+ Q S+ I
Sbjct: 201 DFAEGPWSQSNVESGASLLIPVPAPVGGVLIVSNQTIVYHNGSTFHAIPMQ---STVIQV 257
Query: 921 YAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLS 980
Y VD +G R+LL D G L ++ L+ K V +E+LGE S LS
Sbjct: 258 YGAVDKDGSRFLLADQYGTLSVVALQHTGK-----EVTGVHLEVLGETNIA-----SCLS 307
Query: 981 YIKPG 985
Y+ G
Sbjct: 308 YLDNG 312
Score = 216 bits (551), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 158/230 (68%), Gaps = 10/230 (4%)
Query: 997 DFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT--YFVLGTAVVHP 1054
D EV+ + + D TFE+LH+++L P E S++ F D ++ YFV+GTA +H
Sbjct: 756 DTGEEVDQGFVRLFDDQTFEVLHSYRLDPFETPSSVVVCPFSGDSSSGSYFVVGTAYIHE 815
Query: 1055 EENEPKQGRIIIFH----YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+E EP QGRI++F + + KLQ + EKE+KGA Y + FNGK+LA +NS +L++W+
Sbjct: 816 DEAEPHQGRILVFAVTGIHGERKLQLVTEKEVKGAVYCLNAFNGKVLAGVNSKAQLYKWS 875
Query: 1111 ----NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYN 1166
NEKEL EC H+ + + L+++ +GDFI+VGDLM+S++LL YK ++G+ EEI++D N
Sbjct: 876 ENTDNEKELVSECGHYGHTLVLYMESRGDFIVVGDLMKSVSLLSYKQLDGTIEEIAKDLN 935
Query: 1167 PNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
NWM+++ I+DD+ ++G+E +NLF Q++S A SDE+R L+ VG HL
Sbjct: 936 SNWMSALGIVDDDTYIGSETDFNLFTVQRNSGAASDEERGRLETVGEFHL 985
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%)
Query: 626 FTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 685
FT D NL++AK+ R E+H +TPEGL P ++ LYG+IA+ + FR + +D LFI+TQ
Sbjct: 23 FTGPNDTNLLLAKSTRFEVHLLTPEGLSPQHDVNLYGRIAIFEVFRALNEPQDWLFIVTQ 82
Query: 686 R 686
R
Sbjct: 83 R 83
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
+G+LR+IRNGIGI E A +LPGIKG+WAL D L+ S+V R+L +
Sbjct: 376 DGTLRVIRNGIGINEQASAELPGIKGMWALRETFAAEHDKYLLQSYVSEIRILAI 430
>gi|1399512|gb|AAC47162.1| repE [Dictyostelium discoideum]
Length = 1139
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/501 (45%), Positives = 323/501 (64%), Gaps = 35/501 (6%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R+L GD GRL +L+L +++ V E K E LG ISIP ++YLD+GVV++GS G
Sbjct: 263 RFLFGDHFGRLSVLVLIHQQQ-----KVMELKFEQLGRISIPSSISYLDSGVVYIGSSSG 317
Query: 141 DSQLVKLNRSPDEN-GTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
DSQL++LN D+ +YV+ +E+FTN+ P++D VVD E+QGQ Q+VTCSG +++GSLR
Sbjct: 318 DSQLIRLNTEKDQTTDSYVTYLEAFTNIGPVVDFCVVDAEKQGQAQIVTCSGTYRDGSLR 377
Query: 200 IIRNGIGIEEHACIDLPGIKGIWAL---------------------SIGSPKNLDNTLVL 238
IIRNGIGI E A I+L GIKGI+ + S G + D L+
Sbjct: 378 IIRNGIGIAEQASIELEGIKGIFPINNNNNNNNNNNNNNNNNNNNNSNGITDSKDRYLIT 437
Query: 239 SFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVL-QVTPSAAILISTESKAR 297
SF+ T+VL+ G E+EETE G S+ T YCG +D +L Q+T + LI + + R
Sbjct: 438 SFIECTKVLSFQGEEIEETEFEGLESNCSTLYCGTIDKLNLLIQITNVSINLIDSNTFKR 497
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGS--EIKQLAHRALEYEVACLDIS 355
VS W + I++VS N++Q++ + + Y +++ S I+ + L +E++C+DIS
Sbjct: 498 VSQWNVEPSRRINLVSTNQDQIVLSIDKSLLYFQINSSNKSIQLVKEIELPHEISCIDIS 557
Query: 356 PLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGH 415
P S K+QL +VGLW DI+ R+ LP+LEE+ KEPLGGEI+PRSILM F+
Sbjct: 558 PFD----SFMDTKSQLVSVGLWNDITLRIFKLPTLEEIWKEPLGGEILPRSILMISFDSI 613
Query: 416 CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVI 475
Y+ +LGDG +F F D +S +L DK+K+TLGTQP +LK F+ +T N+FA SDRPTVI
Sbjct: 614 DYIFCSLGDGHLFKFQFDFSSFKLFDKRKLTLGTQPIILKKFKLKNTINIFAISDRPTVI 673
Query: 476 YSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG- 534
YS N KL +S VNL+ V ++ S N++ +P+S+A+AT ++ T GTIDEIQKLHI+T+PL
Sbjct: 674 YSHNKKLFYSVVNLKDVTNVTSFNSDGFPNSMAIATTNSLTIGTIDEIQKLHIKTIPLNE 733
Query: 535 EAPRRIAYQESSQTFGVITTR 555
E RRI + E + VIT +
Sbjct: 734 EMGRRIVHLEDHSCYAVITVK 754
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 171/322 (53%), Gaps = 60/322 (18%)
Query: 707 EGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHG 766
+GL+P+ ++ +YG+I+V+K F K+D LFI T+ + IL D + EI+TKA G
Sbjct: 4 DGLKPMFDVNIYGRISVLKLFSVAGSKQDYLFISTESFKFCILAY--DYEKKEIITKASG 61
Query: 767 NVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN----------------- 809
N D IG+P+E G + IIDP+ R++ L LY GL K+I L+ +N
Sbjct: 62 NAEDTIGRPTEAGQLGIIDPDGRIVALHLYEGLLKLITLDNNNTPNKINNNNNNNNNNNN 121
Query: 810 -------------------------FELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD 844
+ +++R+EEL++ D+ FL+GC+ PTI + +D
Sbjct: 122 NNNNNNNNNINNNNFNINNNNNNSPIQKNVNNVRLEELQVLDMTFLYGCKVPTIAVLFKD 181
Query: 845 V-NGRHVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGK 903
+ +H+ T+EIS K+ E PW Q N+ + +SL++PV PLGG +++ I Y +GK
Sbjct: 182 TKDEKHISTYEISSKDTELVVGPWSQSNVGVYSSLLVPV--PLGGVLVVADNGITYLNGK 239
Query: 904 SYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVE 963
+VA + + + + +VD +G R+L GD GRL +L+L +++ V E K E
Sbjct: 240 VTRSVA---VSYTKFLAFTRVDKDGSRFLFGDHFGRLSVLVLIHQQQ-----KVMELKFE 291
Query: 964 LLGEHCKGPVVEMSSLSYIKPG 985
LG + SS+SY+ G
Sbjct: 292 QLGR-----ISIPSSISYLDSG 308
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 134/243 (55%), Gaps = 33/243 (13%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTAVVHPEENEPKQ 1061
EV + I + TFE++ +++L P E S+ KF G+D NTY +GT++ P ++
Sbjct: 772 EVSYIRIYNDQTFELISSYKLDPYEMGWSITPCKFAGDDVNTYLAVGTSINTPIKS---S 828
Query: 1062 GRIIIFHYD-----------------------DGKLQQIAEKEIKGACYSMCEFNGKLLA 1098
GR+++F +GKL + E + + + Y + FNG+L+A
Sbjct: 829 GRVLLFSLSSSSSSNDKDSLDNNNNNNNNSGANGKLTLLEEIKFRSSVYFLLSFNGRLIA 888
Query: 1099 SINSTVRLFEWTNEKE-----LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT 1153
+++ + +T+ KE + E H + + L L +G FILVGD+M+S++LL ++
Sbjct: 889 AVHKRLFSIRYTHSKEKNCKVISSESVHKGHTMILKLASRGHFILVGDMMKSMSLLVEQS 948
Query: 1154 MEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGT 1213
+GS E+I+R+ P W+ S+ +++D+ F+GAE S N + +K++ +T++ +R L VG
Sbjct: 949 -DGSLEQIARNPQPIWIRSVAMINDDYFIGAEASNNFIVVKKNNDSTNELERELLDSVGH 1007
Query: 1214 VHL 1216
H+
Sbjct: 1008 YHI 1010
Score = 49.3 bits (116), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 21/78 (26%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWAL---------------------SIGSPKNLD 39
+GSLRIIRNGIGI E A I+L GIKGI+ + S G + D
Sbjct: 373 DGSLRIIRNGIGIAEQASIELEGIKGIFPINNNNNNNNNNNNNNNNNNNNNSNGITDSKD 432
Query: 40 NTLVLSFVGHTRVLTLSG 57
L+ SF+ T+VL+ G
Sbjct: 433 RYLITSFIECTKVLSFQG 450
>gi|166240328|ref|XP_637896.2| UV-damaged DNA binding protein1 [Dictyostelium discoideum AX4]
gi|238064940|sp|B0M0P5.1|DDB1_DICDI RecName: Full=DNA damage-binding protein 1; AltName: Full=DNA
repair protein E; AltName: Full=UV-damaged DNA-binding
protein 1
gi|165988543|gb|EAL64385.2| UV-damaged DNA binding protein1 [Dictyostelium discoideum AX4]
Length = 1181
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/501 (45%), Positives = 323/501 (64%), Gaps = 35/501 (6%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R+L GD GRL +L+L +++ V E K E LG ISIP ++YLD+GVV++GS G
Sbjct: 305 RFLFGDHFGRLSVLVLIHQQQ-----KVMELKFEQLGRISIPSSISYLDSGVVYIGSSSG 359
Query: 141 DSQLVKLNRSPDEN-GTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
DSQL++LN D+ +YV+ +E+FTN+ P++D VVD E+QGQ Q+VTCSG +++GSLR
Sbjct: 360 DSQLIRLNTEKDQTTDSYVTYLEAFTNIGPVVDFCVVDAEKQGQAQIVTCSGTYRDGSLR 419
Query: 200 IIRNGIGIEEHACIDLPGIKGIWAL---------------------SIGSPKNLDNTLVL 238
IIRNGIGI E A I+L GIKGI+ + S G + D L+
Sbjct: 420 IIRNGIGIAEQASIELEGIKGIFPINNNNNNNNNNNNNNNNNNNNNSNGITDSKDRYLIT 479
Query: 239 SFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVL-QVTPSAAILISTESKAR 297
SF+ T+VL+ G E+EETE G S+ T YCG +D +L Q+T + LI + + R
Sbjct: 480 SFIECTKVLSFQGEEIEETEFEGLESNCSTLYCGTIDKLNLLIQITNVSINLIDSNTFKR 539
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGS--EIKQLAHRALEYEVACLDIS 355
VS W + I++VS N++Q++ + + Y +++ S I+ + L +E++C+DIS
Sbjct: 540 VSQWNVEPSRRINLVSTNQDQIVLSIDKSLLYFQINSSNKSIQLVKEIELPHEISCIDIS 599
Query: 356 PLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGH 415
P S K+QL +VGLW DI+ R+ LP+LEE+ KEPLGGEI+PRSILM F+
Sbjct: 600 PFD----SFMDTKSQLVSVGLWNDITLRIFKLPTLEEIWKEPLGGEILPRSILMISFDSI 655
Query: 416 CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVI 475
Y+ +LGDG +F F D +S +L DK+K+TLGTQP +LK F+ +T N+FA SDRPTVI
Sbjct: 656 DYIFCSLGDGHLFKFQFDFSSFKLFDKRKLTLGTQPIILKKFKLKNTINIFAISDRPTVI 715
Query: 476 YSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG- 534
YS N KL +S VNL+ V ++ S N++ +P+S+A+AT ++ T GTIDEIQKLHI+T+PL
Sbjct: 716 YSHNKKLFYSVVNLKDVTNVTSFNSDGFPNSMAIATTNSLTIGTIDEIQKLHIKTIPLNE 775
Query: 535 EAPRRIAYQESSQTFGVITTR 555
E RRI + E + VIT +
Sbjct: 776 EMGRRIVHLEDHSCYAVITVK 796
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 187/359 (52%), Gaps = 73/359 (20%)
Query: 670 FRGPTDKKDLLFIITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRG 729
F GP DK NL+++K +IEI + +GL+P+ ++ +YG+I+V+K F
Sbjct: 22 FTGPNDK-------------NLIISKCTKIEIFLMDQDGLKPMFDVNIYGRISVLKLFSV 68
Query: 730 PTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEAR 789
K+D LFI T+ + IL D + EI+TKA GN D IG+P+E G + IIDP+ R
Sbjct: 69 AGSKQDYLFISTESFKFCILAY--DYEKKEIITKASGNAEDTIGRPTEAGQLGIIDPDGR 126
Query: 790 VIGLRLYNGLFKIIPLEKDN---------------------------------------- 809
++ L LY GL K+I L+ +N
Sbjct: 127 IVALHLYEGLLKLITLDNNNTPNKINNNNNNNNNNNNNNNNNNNNNINNNNFNINNNNNN 186
Query: 810 --FELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDV-NGRHVKTHEISLKEKEFTKTP 866
+ +++R+EEL++ D+ FL+GC+ PTI + +D + +H+ T+EIS K+ E P
Sbjct: 187 SPIQKNVNNVRLEELQVLDMTFLYGCKVPTIAVLFKDTKDEKHISTYEISSKDTELVVGP 246
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDA 926
W Q N+ + +SL++PV PLGG +++ I Y +GK +VA + + + + +VD
Sbjct: 247 WSQSNVGVYSSLLVPV--PLGGVLVVADNGITYLNGKVTRSVA---VSYTKFLAFTRVDK 301
Query: 927 NGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
+G R+L GD GRL +L+L +++ V E K E LG + SS+SY+ G
Sbjct: 302 DGSRFLFGDHFGRLSVLVLIHQQQ-----KVMELKFEQLGR-----ISIPSSISYLDSG 350
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 134/243 (55%), Gaps = 33/243 (13%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTAVVHPEENEPKQ 1061
EV + I + TFE++ +++L P E S+ KF G+D NTY +GT++ P ++
Sbjct: 814 EVSYIRIYNDQTFELISSYKLDPYEMGWSITPCKFAGDDVNTYLAVGTSINTPIKS---S 870
Query: 1062 GRIIIFHYD-----------------------DGKLQQIAEKEIKGACYSMCEFNGKLLA 1098
GR+++F +GKL + E + + + Y + FNG+L+A
Sbjct: 871 GRVLLFSLSSSSSSNDKDSLDNNNNNNNNSGANGKLTLLEEIKFRSSVYFLLSFNGRLIA 930
Query: 1099 SINSTVRLFEWTNEKE-----LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT 1153
+++ + +T+ KE + E H + + L L +G FILVGD+M+S++LL ++
Sbjct: 931 AVHKRLFSIRYTHSKEKNCKVISSESVHKGHTMILKLASRGHFILVGDMMKSMSLLVEQS 990
Query: 1154 MEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGT 1213
+GS E+I+R+ P W+ S+ +++D+ F+GAE S N + +K++ +T++ +R L VG
Sbjct: 991 -DGSLEQIARNPQPIWIRSVAMINDDYFIGAEASNNFIVVKKNNDSTNELERELLDSVGH 1049
Query: 1214 VHL 1216
H+
Sbjct: 1050 YHI 1052
Score = 56.6 bits (135), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFT D NL+++K +IEI + +GL+P+ ++ +YG+I+V+K F K+D LFI T
Sbjct: 21 NFTGPNDKNLIISKCTKIEIFLMDQDGLKPMFDVNIYGRISVLKLFSVAGSKQDYLFIST 80
Query: 685 QRTDLNLVVAKNNRIEIHT 703
+ ++ + EI T
Sbjct: 81 ESFKFCILAYDYEKKEIIT 99
Score = 49.3 bits (116), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 21/78 (26%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWAL---------------------SIGSPKNLD 39
+GSLRIIRNGIGI E A I+L GIKGI+ + S G + D
Sbjct: 415 DGSLRIIRNGIGIAEQASIELEGIKGIFPINNNNNNNNNNNNNNNNNNNNNSNGITDSKD 474
Query: 40 NTLVLSFVGHTRVLTLSG 57
L+ SF+ T+VL+ G
Sbjct: 475 RYLITSFIECTKVLSFQG 492
>gi|302837243|ref|XP_002950181.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
nagariensis]
gi|300264654|gb|EFJ48849.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
nagariensis]
Length = 1104
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/564 (43%), Positives = 347/564 (61%), Gaps = 43/564 (7%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R+LLG+ G + +L+L DG+ V + E LG P CL YLD+G+ FVGSR G
Sbjct: 279 RFLLGNRQGGMQLLVLAH----DGS-RVSGLRTEPLGYTCAPSCLAYLDSGLTFVGSRSG 333
Query: 141 DSQLVKLNRSP-DENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
DSQLV+++ P ++ TY+ +++SF +LAPI+D VV+DLERQGQGQLV CSG +GSLR
Sbjct: 334 DSQLVRISAQPVNQPPTYLELVDSFPSLAPIVDFVVMDLERQGQGQLVMCSGIDSDGSLR 393
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL-SGAEVEETE 258
++RNGIGI A ++LPGIKG+W+L D L+L+FVG TR+L L + E++E E
Sbjct: 394 VVRNGIGINRQATVELPGIKGVWSLRSHYDDEYDKYLLLTFVGETRLLALNTEEELDEAE 453
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF S QT +CGN+ +LQ + S+ L+ T S VS W P G +I V + + Q
Sbjct: 454 LPGFDSGSQTLWCGNMATDHLLQASGSSVRLVDTASLQLVSEWRPAPGFAIHVAAGSPTQ 513
Query: 319 VLCATGCD-VYYLEVHGS-----EIKQLAHRALEYEVACLDISPLSNEE---TSSEP-AK 368
V+ ATG + YLEV E+ ++++ L+ EVAC+D+SPL ++ P +
Sbjct: 514 VVVATGGGHLVYLEVVRRPEGVVEVVEISNVVLDSEVACVDVSPLMLQQQPLAGEWPGGR 573
Query: 369 AQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMF 428
+ + AVG W D + +LLS+PSL + PLGGE+IPRS+L T EG Y +V LGDG++
Sbjct: 574 SSVVAVGRW-DQTMQLLSVPSLAPLSSTPLGGEVIPRSVLCTALEGVPYCMVGLGDGALH 632
Query: 429 YFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLST------------------TNVFACSD 470
+ LDPA+G L+DKK++ LGT+P +L+TFR+ + +VFA SD
Sbjct: 633 TWRLDPATGGLSDKKRLVLGTKPIMLRTFRTAAAVSGGGGGSLRGSGGGHGGVSVFAASD 692
Query: 471 RPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRT 530
RPTV+YSSN KL++SN+N V + S ++ ++P SLA+A++ T GT DEIQKLH+R
Sbjct: 693 RPTVVYSSNKKLLYSNLNENDVAFLASFHSAAFPRSLAVASEGALTIGTADEIQKLHVRA 752
Query: 531 VPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIK 590
VPLGE PRRIA+ E ++ GV+T R+D +DGS S +TT ++S + +
Sbjct: 753 VPLGENPRRIAHHEGARMLGVLTMRLD---SDGS---ERSFLRLLDDTTFDVVASYA-LA 805
Query: 591 PGSTKQSTANQPADFNMEVEVHNL 614
PG S A P N V L
Sbjct: 806 PGEMPCSLAAWPGSSNGTAAVGAL 829
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 192/336 (57%), Gaps = 38/336 (11%)
Query: 665 AVMKFFRGPTDKKDLLFIITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM 724
AV+ F GP D +NL+ A + R+EI T+ P+GL V ++ +YG I+ +
Sbjct: 16 AVVASFTGPND-------------VNLITACSTRLEIRTLGPQGLSAVLDVPIYGNISAL 62
Query: 725 KFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAII 784
+ FR DLLFI+T++Y +L+ D ++LT+A+G+V+DRIG+P+ENG + ++
Sbjct: 63 QVFRPRDLHADLLFILTEKYKFCVLQY--DAAKGQLLTRANGDVADRIGRPAENGQLGVV 120
Query: 785 DPEARVIGLRLYNGLFKIIPLEKDNFEL-KASSIRMEELEIQDVQFLHGCQNPT------ 837
DP R+IGL LY+G+ K+IP++ + +L +A S+R+EEL + D+ +LH
Sbjct: 121 DPACRLIGLHLYDGMLKVIPMDDRSGQLSEAFSVRLEELSVLDMAWLHPQPPGGGGGGGS 180
Query: 838 ----IICI-HQDVNG-RHVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAII 891
++C+ HQD G RHVKT+E+ L + PW+Q +++ A+L+IPVP PLGG ++
Sbjct: 181 PGRPLLCVLHQDPKGARHVKTYEMQLGANDLLDGPWQQQHVDSGAALLIPVPSPLGGVVV 240
Query: 892 IGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKM 951
+G+ + Y G A ++ + + + VD +G R+LLG+ G + +L+L
Sbjct: 241 VGENVVSYLGGPGGQAPVSAPLRQTIVTAWCPVDPDGSRFLLGNRQGGMQLLVLAH---- 296
Query: 952 DGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPGST 987
DG+ V + E LG C S L+Y+ G T
Sbjct: 297 DGS-RVSGLRTEPLGYTCA-----PSCLAYLDSGLT 326
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 130/220 (59%), Gaps = 15/220 (6%)
Query: 1007 LLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDP-------NTYFVLGTAVVHPEENEP 1059
L ++D TF+++ ++ L PGE SL + + N F++GTA + PEE EP
Sbjct: 788 LRLLDDTTFDVVASYALAPGEMPCSLAAWPGSSNGTAAVGALNACFLVGTAFIVPEEPEP 847
Query: 1060 KQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEF-NGKLLASINSTVRLFEWT---NEKEL 1115
+GRI++ + ++ + EKE+KGA Y++ F K+LAS+NS V EL
Sbjct: 848 TKGRILVLEH----VRLVTEKEVKGAAYNVLPFVKDKILASVNSKVPASGCDLGGVRVEL 903
Query: 1116 RLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
ECS+ NI+AL+L +G+ ++VGDLMRS++LL Y +G E + DYN W TS+E
Sbjct: 904 ASECSYLGNILALYLATRGNLVVVGDLMRSVSLLSYNVEQGVLEHRAADYNSGWTTSVEA 963
Query: 1176 LDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVH 1215
LDD+ +L +N NL + ++++ + +DE+R LQ VG H
Sbjct: 964 LDDDTYLEGDNHLNLVVLRRNADSATDEERARLQVVGEYH 1003
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLR++RNGIGI A ++LPGIKG+W+L D L+L+FVG TR+L L+ E
Sbjct: 389 DGSLRVVRNGIGINRQATVELPGIKGVWSLRSHYDDEYDKYLLLTFVGETRLLALNTEE 447
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 605 FNMEVEVHNLLIIDQNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKI 664
FN V H + +FT D+NL+ A + R+EI T+ P+GL V ++ +YG I
Sbjct: 1 FNYVVTAHKPTAVTHAVVA-SFTGPNDVNLITACSTRLEIRTLGPQGLSAVLDVPIYGNI 59
Query: 665 AVMKFFRGPTDKKDLLFIITQR 686
+ ++ FR DLLFI+T++
Sbjct: 60 SALQVFRPRDLHADLLFILTEK 81
>gi|357135348|ref|XP_003569272.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
distachyon]
Length = 1074
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/477 (43%), Positives = 308/477 (64%), Gaps = 13/477 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYL GD G L ++++ E V + K +GE SI ++YLD+G+V++GSR G
Sbjct: 265 RYLYGDNTGALHLIVITHEWG-----RVTDLKTHYMGETSIASTISYLDSGLVYIGSRFG 319
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KLN D + ++V ++E F N PI+D VVD ER+GQGQ++TCSG +K+GS+R
Sbjct: 320 DSQLIKLNIQADASASFVEILEQFMNTGPIVDFCVVDTERRGQGQVITCSGAYKDGSIRA 379
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGA-EVEETEM 259
+RNG+ I + A ++L G+KG+W++ D LV++F+ T L ++ E+EE ++
Sbjct: 380 VRNGVVITDQASVELRGMKGLWSMKSSLNDPYDTFLVVTFINETHFLAMNMENELEEVDI 439
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF S+ QT CG+ ++QVT + L+S+ S + W P S++V + N NQV
Sbjct: 440 KGFDSETQTLACGSAIHNQLIQVTSRSVRLVSSVSLELLDQWFAPARFSVNVAAANANQV 499
Query: 320 LCATG-CDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWT 378
L ATG C + YLE+ S+I + H LE+E++CLDI+P+ P + LAAVG+WT
Sbjct: 500 LLATGNCHLVYLEITSSKIVPVKHIQLEHEISCLDINPIGEN-----PQYSSLAAVGMWT 554
Query: 379 DISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGR 438
DIS R+ SLP L+ + KE LG E++PRS+L+ E YL LGDG +F F L+ ++
Sbjct: 555 DISVRIFSLPGLKLIRKEHLG-EVVPRSVLLCTIEAVSYLFCGLGDGHLFSFVLNSSTCE 613
Query: 439 LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSL 498
L+D+++V+LG QP L F S + T+VFA SDRP VIYSS+ KL++S NL++VNH+C
Sbjct: 614 LSDRRRVSLGAQPISLHIFSSQNRTHVFAASDRPAVIYSSDQKLLYSYANLKEVNHVCPF 673
Query: 499 NAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
N +P+S+ LA +S + G I++I++LHIRT+PL E RRI +QE SQT + + +
Sbjct: 674 NTAVFPESIVLAKESELSIGEINDIRQLHIRTIPLKEQARRICHQEQSQTLALCSFK 730
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 193/298 (64%), Gaps = 18/298 (6%)
Query: 689 LNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMI 748
LNL+VAK NR+EI+ +TP+GL+ + ++ LYG IA ++ FR ++ +D LFI +RY ++
Sbjct: 30 LNLIVAKCNRMEIYLLTPQGLQLMVDVPLYGTIATLELFRSRSETQDFLFISMERYRCIV 89
Query: 749 LECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
L G N E++T++ G+VSD IG+P++NG I +IDP+ R+IGL LY+GLFK+IP +
Sbjct: 90 LHWDGR--NSELITRSGGDVSDFIGRPTDNGQIGVIDPQNRLIGLSLYDGLFKVIPFDNK 147
Query: 809 NFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEFTKTPW 867
+A +IR++E + D++FL+GC PT++ +HQD + RHVKT+E++L++K+F + W
Sbjct: 148 GNLKEALNIRLQEFLVLDIKFLYGCARPTVVVLHQDNKDSRHVKTYEVALEDKDFVEGSW 207
Query: 868 KQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDAN 927
Q N++ A L+IPV PLGG IIIG+ +I+Y S ++ A++ IK S I +VD +
Sbjct: 208 SQSNLDNSAHLLIPV--PLGGVIIIGEHTIVYCSATTFKALS---IKQSIIRAVGRVDPD 262
Query: 928 GERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
G RYL GD G L ++++ E +V L H G S++SY+ G
Sbjct: 263 GSRYLYGDNTGALHLIVITHEWG----------RVTDLKTHYMGETSIASTISYLDSG 310
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 131/201 (65%), Gaps = 3/201 (1%)
Query: 994 QPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVH 1053
+P + E H + ++D TF +L H L E S++S F +D N Y+ +GTA +
Sbjct: 730 KPKFIHAESGKHFVRLLDYQTFWVLSTHTLDEFECGCSIVSCSFSDDDNFYYCVGTAYIL 789
Query: 1054 PEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT--- 1110
P E EP +GRI+IF ++ KL+ +AE+E KGA YS+ GKLLA++N + +++W
Sbjct: 790 PYEIEPTKGRILIFLVEERKLRLVAERETKGAVYSLNALTGKLLAAVNQKIIVYKWVRRD 849
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
N +L+ ECS+ ++AL + G FI+VGD++RS++LL+YK EG E ++RD+N W+
Sbjct: 850 NRHQLQSECSYRGCVLALHTQTHGHFIVVGDMVRSVSLLRYKYEEGLIEVVTRDFNTKWI 909
Query: 1171 TSIEILDDELFLGAENSYNLF 1191
T++ +LDD++++GA+N NLF
Sbjct: 910 TAVAMLDDDIYIGADNCCNLF 930
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFT+ LNL+VAK NR+EI+ +TP+GL+ + ++ LYG IA ++ FR ++ +D LFI
Sbjct: 23 NFTAPHHLNLIVAKCNRMEIYLLTPQGLQLMVDVPLYGTIATLELFRSRSETQDFLFISM 82
Query: 685 QR 686
+R
Sbjct: 83 ER 84
Score = 46.6 bits (109), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GS+R +RNG+ I + A ++L G+KG+W++ D LV++F+ T L ++
Sbjct: 374 DGSIRAVRNGVVITDQASVELRGMKGLWSMKSSLNDPYDTFLVVTFINETHFLAMN 429
>gi|358338734|dbj|GAA31211.2| DNA damage-binding protein 1, partial [Clonorchis sinensis]
Length = 1515
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 247/617 (40%), Positives = 354/617 (57%), Gaps = 76/617 (12%)
Query: 79 SERYLLGDLAGRLFMLLLEKEEK-------MDGTFSVKEP-------KVELLGEISIPEC 124
++RYLLGD+AGRL+M+ L E+ + T S P ++ELLGE + PE
Sbjct: 258 AQRYLLGDMAGRLYMVHLLAEDHTPSGNGLLGSTSSAAVPSARIGSIRIELLGETATPES 317
Query: 125 LTYLDNGVVFVGSRLGDSQLVKLNRSPD-ENGTYVSVMESFTNLAPIIDMVVVDLERQGQ 183
+ Y+DNGVVF+G LGDSQL++LN PD E +Y++V+E++TN+ PI+DMV+ LE +GQ
Sbjct: 318 IAYVDNGVVFIGCTLGDSQLIRLNPDPDPERNSYITVLENYTNIGPIVDMVL--LESKGQ 375
Query: 184 GQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGH 243
QL+TCSG +KEG+LRIIRNGIGI EHA ID IKG W + S + D+++V+S VG
Sbjct: 376 NQLITCSGAYKEGTLRIIRNGIGIHEHATIDQDLIKGAWCFPLESDR-YDDSIVVSMVGQ 434
Query: 244 TRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDP---------------------RTVLQV 282
T++L L+ ++ + GF +D+QT YC + P ++Q
Sbjct: 435 TQLLRLTDDDITALHLEGFKTDEQTVYCATLSPMDACTSDNPESSSRSYSVFQHSLLMQA 494
Query: 283 TPSAAILISTE---SKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGS---- 335
T S LI ++ W P+G+ IS +S + ++ A+G ++Y L V G
Sbjct: 495 TTSGIRLIGIHHLNGSGCLAEWRSPSGRGISCLSSHGALIVVASGPELYVLRVVGPANQP 554
Query: 336 EIKQLAHRALEYEVACLDISPL---------SNEETSSEPAK---AQLAAVGLWTDISAR 383
+Q AHR + EVAC+D++P S T EP QL AVGLW
Sbjct: 555 SFEQTAHRTMSNEVACIDLTPFDHKRAAYAASQTSTIDEPVDYTVPQLVAVGLWLGYGLA 614
Query: 384 LLSLPSLEEVCKEPL-------GGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPAS 436
LL LP+LE V +EPL G ++PRS+L+ E YL A+GDG+++++++ P++
Sbjct: 615 LLRLPNLELVHEEPLPETTASTGTALLPRSVLLAQLEDMAYLFAAMGDGTLYFYTVCPSA 674
Query: 437 GR--LTDKKKVTLGTQPTV-LKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVN 493
L D K+V GT P++ LK +RS NVF CS+ P VIYS +KL+F+N+N+++VN
Sbjct: 675 DGIVLRDAKRVNAGTGPSMFLKQWRSQCKVNVFVCSNHPCVIYSIKNKLIFANLNMKEVN 734
Query: 494 HMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553
M LN Y D +AL T + G++DEIQKLH+RTVPL E P+R+A Q+ + + GVIT
Sbjct: 735 FMAPLNGAFYRDCIALVTPTALVIGSVDEIQKLHVRTVPLEETPKRLALQDETGSLGVIT 794
Query: 554 TRIDI-QEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVH 612
R ++ QE G PVR S S +Q ST S L P S + EVEV
Sbjct: 795 YRQEVFQEGSGFKPVRSSISL-SQKVPKST-SRLPKTAPSSVSATERK-----FREVEVS 847
Query: 613 NLLIIDQNTFERNFTSS 629
+LLI +++T E F S
Sbjct: 848 SLLIFNKSTMELMFAHS 864
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/245 (43%), Positives = 146/245 (59%), Gaps = 14/245 (5%)
Query: 972 PVVEMSSLSYIKPGSTKQSTANQPADFNM------EVEVHNLLIIDQNTFEILHAHQLFP 1025
PV SLS P ST + P+ + EVEV +LLI +++T E++ AH +
Sbjct: 808 PVRSSISLSQKVPKSTSRLPKTAPSSVSATERKFREVEVSSLLIFNKSTMELMFAHSFYF 867
Query: 1026 GEYALSLISSKFGEDP-----NTYFVLGTAVVHPEENEPKQGRIIIFHYD--DGKLQQIA 1078
+ + + S +P + + +GTA + EE EP +GRI +FH+D +L+ +
Sbjct: 868 SQTLVEVAVSIASIEPTDGSKSMLYAVGTAFLVEEEVEPSKGRIHLFHWDPETARLETVL 927
Query: 1079 EKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFIL 1138
++ GA Y + +FNG+LLA+INS+VRLF+ E LRL CS NIIALFL+ KGDF+L
Sbjct: 928 VHDVNGAVYRLLDFNGRLLAAINSSVRLFD-IKEDSLRLACSFNENIIALFLRRKGDFVL 986
Query: 1139 VGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSA 1198
VGDLMRSLTLL Y+ +FE I R NP W T IEILDDE FL AE +LF+ +DS
Sbjct: 987 VGDLMRSLTLLLYRPNVNNFEAIGRHRNPRWTTCIEILDDEHFLAAEVENSLFVVSRDSP 1046
Query: 1199 ATSDE 1203
+ E
Sbjct: 1047 ENTQE 1051
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 168/308 (54%), Gaps = 31/308 (10%)
Query: 688 DLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
DLNL++ KN IE+ VT EGLR ++++ + KI FR + D LFI+T +
Sbjct: 7 DLNLLICKNTYIEVFEVTSEGLRLIRDVPINAKIVAACLFRRKERQTDSLFILTHKAGFA 66
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIP--- 804
+++C D+++ +T G+V D + + G ++DP A + +RLY+GL +IIP
Sbjct: 67 LIDCARKGDDVQFVTVVSGSVEDCGARLIDQGFDVLVDPGANCVVVRLYHGLLRIIPLNG 126
Query: 805 ---------LEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEI 855
LE + + ++R+EE I D+ FLHG PT I++D H+KT+EI
Sbjct: 127 IGEKLTTDSLEVNQYAANTYNVRIEEGNIVDMAFLHGYTLPTFAMIYEDELVLHMKTYEI 186
Query: 856 SLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHS--GKSYVAVAPQII 913
S +E D+IE ++ L+IPVP+P GG I++G I YH+ G PQ
Sbjct: 187 SGREPALRNVQLTLDSIEPDSKLLIPVPKPFGGVILVGDNIIYYHTKDGPHISQYIPQ-A 245
Query: 914 KSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEK-------MDGTFSVKEP------ 960
K+S ++CYA VDA +RYLLGD+AGRL+M+ L E+ + T S P
Sbjct: 246 KASQVLCYAAVDA--QRYLLGDMAGRLYMVHLLAEDHTPSGNGLLGSTSSAAVPSARIGS 303
Query: 961 -KVELLGE 967
++ELLGE
Sbjct: 304 IRIELLGE 311
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EG+LRIIRNGIGI EHA ID IKG W + S + D+++V+S VG T++L L+ +
Sbjct: 387 EGTLRIIRNGIGIHEHATIDQDLIKGAWCFPLESDR-YDDSIVVSMVGQTQLLRLTDDDI 445
Query: 61 GFHLLRGFSS 70
L GF +
Sbjct: 446 TALHLEGFKT 455
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FT DLNL++ KN IE+ VT EGLR ++++ + KI FR + D LFI+T
Sbjct: 1 HFTGPDDLNLLICKNTYIEVFEVTSEGLRLIRDVPINAKIVAACLFRRKERQTDSLFILT 60
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ L+ ++ VT
Sbjct: 61 HKAGFALIDCARKGDDVQFVT 81
>gi|301121252|ref|XP_002908353.1| DNA damage-binding protein, putative [Phytophthora infestans T30-4]
gi|262103384|gb|EEY61436.1| DNA damage-binding protein, putative [Phytophthora infestans T30-4]
Length = 1150
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/496 (45%), Positives = 312/496 (62%), Gaps = 22/496 (4%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R+LL D G L ++ L+ K V +E+LGE +I CL+YLDNGVVF+GS G
Sbjct: 267 RFLLADQYGTLSVVALQHTGK-----EVSGVHLEVLGETNIASCLSYLDNGVVFIGSTFG 321
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+KLN DE G+Y+ V++S+ N+ PIID V+DL+RQGQGQ+VTCSG K+G+LR+
Sbjct: 322 DSQLIKLNADRDETGSYIEVLDSYVNVGPIIDFCVMDLDRQGQGQIVTCSGADKDGTLRV 381
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGA-EVEETEM 259
IRNGIGI E A +LPGIKG+WAL D L+ S+V R+L + E+EE E+
Sbjct: 382 IRNGIGINEQASAELPGIKGMWALRETFAAEHDKFLLQSYVSEVRILAIGDEDEMEEKEI 441
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
FT + +T C N+ LQVT S LIS S + S+W P +G I+V + N QV
Sbjct: 442 PAFT-NVKTLLCRNMYGDYWLQVTESEVRLISCSSFSLSSTWSPASGSRITVAAANPTQV 500
Query: 320 LCAT-GCDVYYLEVHGSEIKQLAHRALEYEVACLDISPL--------------SNEETSS 364
AT G + YLE+ ++ + +E+E+AC+DI+PL S+
Sbjct: 501 AVATSGGVLVYLEIENGQVVEKTTVKMEHELACVDITPLTSSGAGDGDVAMTGSSTHWDM 560
Query: 365 EPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGD 424
++ L VGLWT S +L LP+LE+ E LG +++PRS+L FEG YLLV LGD
Sbjct: 561 AALRSTLCVVGLWTSFSVCVLQLPTLEKRTTEALGTDLLPRSVLCNTFEGKDYLLVGLGD 620
Query: 425 GSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVF 484
GS+ + LD G L +K+V+LG+QP L TFRS + T+VFA DRPTVIYS+N+KL++
Sbjct: 621 GSLMNYELDVQQGALGTRKRVSLGSQPLSLSTFRSKNMTHVFAACDRPTVIYSNNNKLLY 680
Query: 485 SNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQE 544
SN+N ++VN MC ++ES+P+ LAL+++ T GT+D+IQKLHI+T L E RRIA+
Sbjct: 681 SNINSKEVNVMCPFDSESFPECLALSSEEELTIGTVDDIQKLHIQTFHLNEWARRIAHDP 740
Query: 545 SSQTFGVITTRIDIQE 560
S T GV+T + +
Sbjct: 741 ESHTLGVLTVSFTVDD 756
Score = 237 bits (605), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 187/305 (61%), Gaps = 17/305 (5%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T D NL++AK+ R E+H +TPEGL+P +I LYG+IA+ + FR + +D +FI+TQ
Sbjct: 23 FTGANDTNLLLAKSTRFEVHLLTPEGLQPQHDINLYGRIAIFEVFRAANEPQDWIFIVTQ 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
R+ +L D +++TKAHG++ D IG+ SE IDPE R+IG+ LY G FK+
Sbjct: 83 RFQFCVLAY--DSSAQQVVTKAHGSIRDSIGRSSEIVTSGNIDPEGRLIGMNLYEGYFKV 140
Query: 803 IPLEKDNFELKAS-SIRMEELEIQDVQFLHGCQNPTIICIHQDVNG-RHVKTHEISLKEK 860
IP++ L+ + +IR++EL + D++FLHG PTI +++D RHVKT+ I LKEK
Sbjct: 141 IPIDSGKGILRDTFNIRLDELRVIDIKFLHGYNKPTICVLYEDYKAARHVKTYHILLKEK 200
Query: 861 EFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVC 920
+F + PW Q N+E ASL+IPVP P GG +I+ ++I+YH+G ++ A+ Q S+ I
Sbjct: 201 DFAEGPWSQSNVESGASLLIPVPAPTGGVLIVSNQTIVYHNGSTFHAIPMQ---STVIQV 257
Query: 921 YAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLS 980
Y VD +G R+LL D G L ++ L+ K V +E+LGE S LS
Sbjct: 258 YGAVDKDGSRFLLADQYGTLSVVALQHTGK-----EVSGVHLEVLGETNIA-----SCLS 307
Query: 981 YIKPG 985
Y+ G
Sbjct: 308 YLDNG 312
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 156/230 (67%), Gaps = 10/230 (4%)
Query: 997 DFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDP--NTYFVLGTAVVHP 1054
D EV+ + + D TFE+LH+++L P E S++ D +YFV+GTA +H
Sbjct: 756 DTGEEVDQGFVRLFDDQTFEVLHSYRLDPFETPCSVVVCPLAGDSVNASYFVVGTAYIHE 815
Query: 1055 EENEPKQGRIIIFH----YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
EE EP QGRI++F + + KLQ + EKE+KGA Y + FNGK+LA +NS +L++W+
Sbjct: 816 EEAEPHQGRILVFAVTGIHGERKLQLVTEKEVKGAVYCLNSFNGKVLAGVNSKAQLYKWS 875
Query: 1111 ----NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYN 1166
NEKEL EC H+ + + L+++ +GDFI+VGDLM+S++LL YK ++G+ EEI++D N
Sbjct: 876 ENTDNEKELVSECGHYGHTLVLYMESRGDFIVVGDLMKSISLLSYKQLDGTIEEIAKDLN 935
Query: 1167 PNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
NWM+++ I+DD+ ++G+E +NLF Q++S A SDE+R L+ VG HL
Sbjct: 936 SNWMSAVGIVDDDTYIGSETDFNLFTVQRNSGAASDEERGRLETVGEFHL 985
Score = 73.6 bits (179), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 626 FTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 685
FT + D NL++AK+ R E+H +TPEGL+P +I LYG+IA+ + FR + +D +FI+TQ
Sbjct: 23 FTGANDTNLLLAKSTRFEVHLLTPEGLQPQHDINLYGRIAIFEVFRAANEPQDWIFIVTQ 82
Query: 686 R 686
R
Sbjct: 83 R 83
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
+G+LR+IRNGIGI E A +LPGIKG+WAL D L+ S+V R+L +
Sbjct: 376 DGTLRVIRNGIGINEQASAELPGIKGMWALRETFAAEHDKFLLQSYVSEVRILAI 430
>gi|313238818|emb|CBY20011.1| unnamed protein product [Oikopleura dioica]
gi|313245836|emb|CBY34826.1| unnamed protein product [Oikopleura dioica]
Length = 1135
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/552 (42%), Positives = 325/552 (58%), Gaps = 37/552 (6%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVEL----LGEISIPECLTYLDNGVVFVG 136
RYL GD G LF+LLL+ E + E ++ L LG ++P L+Y+DN VVFVG
Sbjct: 273 RYLCGDSNGELFLLLLDYNEN-----RIPEERMRLATKYLGRTTLPNTLSYIDNYVVFVG 327
Query: 137 SRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEG 196
S GDS+L+++ S + +G + + + + NL PI DM +VD E+QGQGQLVT SG G
Sbjct: 328 STFGDSELIRIEVSDNNSGQHFTSLHQYDNLGPIKDMCIVDFEKQGQGQLVTASGVGTGG 387
Query: 197 SLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEE 256
SLRIIRNG+GI E+A IDL G+KG+WAL S ++L+LSFVG T L L G +V E
Sbjct: 388 SLRIIRNGVGIHEYASIDLEGVKGLWALKYLSSSTKQDSLLLSFVGQTIFLRLEGQDVTE 447
Query: 257 T-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCN 315
E+ GFT+ +QT Y GNV + LQ+T LI+ ES SWEP I++ S N
Sbjct: 448 VEEIPGFTNGEQTMYAGNVTDQQFLQITEKQVRLIADESLK--GSWEPEENTQINLCSVN 505
Query: 316 KNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVG 375
KNQVL G YLE++ EI + + + E+AC+DISPL E +S +G
Sbjct: 506 KNQVLLGVGSTAIYLEINDCEIVEKSRHVFDSEIACVDISPLQKEMSS------DFFTIG 559
Query: 376 LWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--EGHCYLLVALGDGSMFYFSLD 433
LW +++ + LPS+E + K LGG IIPRS+L+ F YLLV++GDG++FY L+
Sbjct: 560 LW-NVTVSVNKLPSMEVIAKMELGGNIIPRSVLLNSFGENNTPYLLVSIGDGALFYIKLN 618
Query: 434 PASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVN 493
+ KK++ LGTQPT L F++ + + VFACSDRP VI+S+N K+ FSNVNL+QVN
Sbjct: 619 EDHS-FSSKKRIQLGTQPTSLNKFQTSNGSTVFACSDRPAVIHSTNEKIFFSNVNLKQVN 677
Query: 494 HMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553
HMC L+ E YP++LAL ++ G ID+IQKLH T+ L E P + + E + F +
Sbjct: 678 HMCVLDTEGYPNALALVNENALLIGKIDDIQKLHTSTIRLNETPHSVLHYEEREVFAYLG 737
Query: 554 TRIDIQEADGSTPVRPSASTQAQNTTSSTISSLSY---IKPGSTKQSTANQPADFNMEVE 610
+ E D RP Q +T + LS K G ++ +N + M
Sbjct: 738 ---EFDEED-LRDTRPD-----QESTKKLFTPLSIQCPYKSGVVERDDSNSLTHYTM--- 785
Query: 611 VHNLLIIDQNTF 622
V+ L+I D+ TF
Sbjct: 786 VNTLVICDEITF 797
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 177/303 (58%), Gaps = 16/303 (5%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL+VAK +RIE++ T GL+PV E LYG+IAV++ FR +KKD LFI+T+
Sbjct: 29 TSAADLNLIVAKYSRIEVNLSTQTGLKPVTEFNLYGRIAVIEVFRYKNEKKDCLFILTES 88
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
A ILE +D +I+T+A+G++ D+ S++G+ A +DPEAR I LRLY+G+ KII
Sbjct: 89 CYACILEY---VDG-KIITRAYGDMRDKNYSVSQSGMHACVDPEARCIALRLYDGVLKII 144
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEK--- 860
L + L ++ R+EE+ + D+ FLH PT+ ++ D + RH+ T I+L
Sbjct: 145 NLNSSSKHLTSAEQRIEEILVVDMCFLHTANKPTLALLYDDNSSRHLSTIAITLDNSGSG 204
Query: 861 -EFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIV 919
K P++ +E + L++ VPEPL G +++G +I YH K+ + + I TI
Sbjct: 205 ASIHKGPFRHTQVEQDTILIVAVPEPLAGILLLGHVNITYHDSKNRSTCSIENIVKRTIE 264
Query: 920 CYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSL 979
C +D + RYL GD G LF+LLL+ E + E ++ L ++ G ++L
Sbjct: 265 CVTPIDKH--RYLCGDSNGELFLLLLDYNEN-----RIPEERMRLATKYL-GRTTLPNTL 316
Query: 980 SYI 982
SYI
Sbjct: 317 SYI 319
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 143/237 (60%), Gaps = 7/237 (2%)
Query: 983 KPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPN 1042
K G ++ +N + M V+ L+I D+ TF AH GE + + +K G+
Sbjct: 768 KSGVVERDDSNSLTHYTM---VNTLVICDEITFTPKWAHFFDVGEISSCMCIAKLGKKDE 824
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNG-KLLASI 1100
+ V+GTA+ +E E K GRI +F Y + KL ++ K++ GA YS+ NG K++ +I
Sbjct: 825 QFIVVGTAIT-ADEQECKNGRICVFSYSKEEKLTLVSTKQVNGAVYSVKALNGNKIICAI 883
Query: 1101 NSTVRLFEWTNEKELRLECSHFNNIIALFLKV-KGDFILVGDLMRSLTLLQYKTMEGSFE 1159
N +++FE + L+ E N+I + + V K FIL DLMRS+++ YK +EG+ E
Sbjct: 884 NQQLKVFEMNEQTTLQSEAPIANHITCVAVDVSKNGFILSADLMRSISVFSYKPLEGALE 943
Query: 1160 EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
EI+RDY+PNWMT+I+++DD+ ++GAENS N+FIC +++ A +EDR L G H+
Sbjct: 944 EIARDYHPNWMTAIKMIDDDNYIGAENSENIFICTRNTEAPDEEDRQQLLPTGYYHV 1000
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 2 GSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEWG 61
GSLRIIRNG+GI E+A IDL G+KG+WAL S ++L+LSFVG T L L G +
Sbjct: 387 GSLRIIRNGVGIHEYASIDLEGVKGLWALKYLSSSTKQDSLLLSFVGQTIFLRLEGQD-- 444
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVK 109
+ + NG Y G++ + F+ + EK+ ++ S+K
Sbjct: 445 ---VTEVEEIPGFTNGEQTMY-AGNVTDQQFLQITEKQVRLIADESLK 488
>gi|325186344|emb|CCA20849.1| predicted protein putative [Albugo laibachii Nc14]
Length = 1148
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/500 (43%), Positives = 311/500 (62%), Gaps = 30/500 (6%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R+LL D G L ++ L+ E K V + +E+LG+ SI C++YLDNGVVFVGS G
Sbjct: 267 RFLLADQYGALHVVALQTEGK-----EVLDVYLEVLGQTSIASCVSYLDNGVVFVGSTFG 321
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN DE+G+Y+ V++S+ N+ PIID V+DL+RQGQGQ+VTCSG K+GSLR+
Sbjct: 322 DSQLVKLNSKRDESGSYIEVLDSYVNIGPIIDFCVMDLDRQGQGQIVTCSGADKDGSLRV 381
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGA-EVEETEM 259
IRNGIGI E A +LPGIKG+WAL D LV S++ R++T+ + E+EE E+
Sbjct: 382 IRNGIGINEQASAELPGIKGMWALRESLASEYDKYLVQSYLNEIRIMTIGDSDEMEEVEI 441
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
F D +T YC NV+ LQVT + +I ++ + W PP I+V S N Q+
Sbjct: 442 EAFL-DAKTLYCRNVNEDGWLQVTETEVRIIDAQTTSICCGWIPPPSTRITVASANPTQI 500
Query: 320 LCATGCDVY-YLEVHGSEIKQLAHRALEYEVACLDISPLSNE-------------ETSSE 365
+ AT V Y+E+ ++ + A + +E+E+AC+D+SP ++ + + E
Sbjct: 501 VLATSSKVLIYMEILDKQLMEKARKEMEFEIACIDLSPRLDQIDPPALTRSSQVMDEAME 560
Query: 366 PA---------KAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHC 416
A + + AVG WT S +LSLPSL+E+ KE +++PRS+L FE
Sbjct: 561 DAIVSRDANALRTSICAVGFWTSSSVCVLSLPSLDELSKETFDKDLLPRSVLCASFEDSD 620
Query: 417 YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIY 476
YLL+ LGDGS+ LD G L+++K+++LGTQP L F S +VFA DRPTVIY
Sbjct: 621 YLLIGLGDGSLVTCHLDREFGTLSERKRISLGTQPISLSAFWSKDKLHVFASCDRPTVIY 680
Query: 477 SSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEA 536
+ KL++SNVN ++V M + ++E +P+ LALA+ S T GT+D+IQKLHI++ L E
Sbjct: 681 YNKKKLLYSNVNAKEVAVMSTFHSEVFPECLALASGSELTIGTVDDIQKLHIQSFHLNEW 740
Query: 537 PRRIAYQESSQTFGVITTRI 556
RRIA+ S+T GV T ++
Sbjct: 741 ARRIAHDSRSRTLGVATVKL 760
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/307 (39%), Positives = 187/307 (60%), Gaps = 12/307 (3%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T TDLNL++AK E+H +T EGL+P +I +YG+IA+ + FR + +D +F++TQ
Sbjct: 23 FTSPTDLNLLIAKCTHFEVHLLTAEGLQPQHDIKMYGRIAIFEKFRPSGETQDWIFLVTQ 82
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
R+ +L D +I+TKA+G++ D IG+ SE IDP+ R+IG+ +Y G FK+
Sbjct: 83 RFQFCVLAY--DTTLQQIITKANGSLRDTIGRNSEILTNGNIDPDGRLIGMNIYEGYFKV 140
Query: 803 IPLEKDNFELKAS-SIRMEELEIQDVQFLHGCQNPTIICIHQDVNG-RHVKTHEISLKEK 860
IP++ + LKA+ +IR++EL I D++FL+G PTI +++D RHVKT+ I LKEK
Sbjct: 141 IPIDNHSKSLKAAFNIRLDELRILDIKFLYGYNKPTICVLYEDFKAARHVKTYFILLKEK 200
Query: 861 EFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVC 920
+F + PW Q N+E A+L+IPVP P GG +II ++I+YH+G + A+ Q ++ I
Sbjct: 201 DFAEGPWSQSNVEAGANLLIPVPMPYGGVLIISNQTIVYHNGTYFHAIPMQ---NTMIQV 257
Query: 921 YAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLS 980
Y V +G R+LL D G L ++ L+ E K V + +E+LG+ V
Sbjct: 258 YGAVGDDGSRFLLADQYGALHVVALQTEGK-----EVLDVYLEVLGQTSIASCVSYLDNG 312
Query: 981 YIKPGST 987
+ GST
Sbjct: 313 VVFVGST 319
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/226 (46%), Positives = 153/226 (67%), Gaps = 10/226 (4%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPN--TYFVLGTAVVHPEENE 1058
EVE + + D TFE L + +L P E S+I+ F D + TY+V+GTA VH EE E
Sbjct: 768 EVEQGYIRLFDDQTFECLKSFRLDPFESPCSIITCIFTGDSSGGTYYVVGTAFVHEEEAE 827
Query: 1059 PKQGRIIIFH----YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT---- 1110
P QGRI++F + D +LQ + EKE+KG+ Y + FNGKLLA +NS V LF+W+
Sbjct: 828 PHQGRILVFTVSGIHGDRRLQLVTEKEVKGSVYCLNAFNGKLLAGVNSKVYLFKWSESEE 887
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
N +EL EC H + + L+++ +GDFI+VGDLM+S++LL +K ++GS EEI+RD N NWM
Sbjct: 888 NGEELVSECGHHGHTLVLYMESRGDFIVVGDLMKSISLLNHKQLDGSIEEIARDLNSNWM 947
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
T++ I+DD+ ++G+E +NLF Q++S A SDE+R L+ +G HL
Sbjct: 948 TAVGIIDDDNYVGSETDFNLFTVQRNSGAASDEERGRLETIGEYHL 993
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLR+IRNGIGI E A +LPGIKG+WAL D LV S++ R++T+ ++
Sbjct: 376 DGSLRVIRNGIGINEQASAELPGIKGMWALRESLASEYDKYLVQSYLNEIRIMTIGDSD 434
>gi|452824086|gb|EME31091.1| DNA damage-binding protein 1 isoform 2 [Galdieria sulphuraria]
Length = 1150
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/539 (42%), Positives = 339/539 (62%), Gaps = 36/539 (6%)
Query: 47 VGHTRVLTLSGAEWGFHLLRGFSSL---GSLWNGWSE------RYLLGDLAGRLFMLLLE 97
+G V +SG+ LRG+ S+ +++ + RYLLGD G L++L+LE
Sbjct: 227 LGQETVTYISGSG-----LRGYHSIPVSATIFRAYGRIDKDGTRYLLGDEKGILYLLVLE 281
Query: 98 KEEKMDGTFSVKEPKV-----ELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPD 152
+ + TF+ E K+ + LGE S+P + YLDNG V++GS GDSQL++L P
Sbjct: 282 QSTSL-STFTETETKITGLKIQTLGETSLPSTIDYLDNGFVYIGSCHGDSQLIRLLSEPH 340
Query: 153 -ENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHA 211
E G+++ VME++ NL+PI+D V+D ERQGQGQ+VTCSG K+GSLRIIRNGIGI E A
Sbjct: 341 PETGSFLEVMETYPNLSPIVDFCVMDAERQGQGQVVTCSGAAKDGSLRIIRNGIGIHEQA 400
Query: 212 CIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE-VEETEMGGFTSDQQTFY 270
+++PG+K +++L S + + L+LSF +RVL L E + E F + T Y
Sbjct: 401 SVEVPGVKELFSLKRSSLSSQHSLLLLSFASESRVLELVSTELMAEANFPVFEMQEPTLY 460
Query: 271 CGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYY 329
CGNV ++Q+TPS A LIS E + V+ W PP+G ISV S N Q++ A TG ++ Y
Sbjct: 461 CGNVVGDCIVQITPSKARLISCEDMSIVNEWHPPSGFRISVASGNSMQLIIATTGGNLIY 520
Query: 330 LEVHGS--EIKQLAHRALEYEVACLDISPL--SNEETSSEPAKAQLAAVGLWTDISARLL 385
++ + I + ++++LEYE+ LDISPL + +S+ + AVG+WT++S R
Sbjct: 521 FDIDANPKRIMEKSYKSLEYEICSLDISPLGQAGMNLASQAIPSSFVAVGMWTEVSIRFY 580
Query: 386 SLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGR------- 438
SLPSL+ + E LG ++I RS+L +G Y L ALGDG + + LD ++
Sbjct: 581 SLPSLDLIHTEKLGLDVIARSLLFVTMDGEDYFLAALGDGRLLTYRLDKSAKDTDSEKKF 640
Query: 439 LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSN--HKLVFSNVNLRQVNHMC 496
L D++++++GTQP L F + + +VFA DRPTVI+SS+ KL+ SNVNLR+V +C
Sbjct: 641 LYDQRQMSIGTQPASLSIFETQNALHVFAACDRPTVIHSSSGGGKLLCSNVNLREVTRVC 700
Query: 497 SLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
S ++E++PD LAL T+ + GT+D IQKLHIRT+PLGE PRRIA+ ++ F V+TT+
Sbjct: 701 SFSSEAFPDCLALVTEGSLLLGTVDNIQKLHIRTIPLGEQPRRIAHLDTHHVFAVLTTK 759
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/297 (40%), Positives = 183/297 (61%), Gaps = 7/297 (2%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+L++ K +R+EI++++ EGL PV E+ +YG+I+VMK R P D +D LF +T++Y +L
Sbjct: 29 DLILGKCSRMEIYSLSSEGLVPVIELPIYGRISVMKLCRFPDDLQDSLFFLTEKYKFAVL 88
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
R + E T A G+V DRIG P+ G I I DP GL LY+GLFK+IP +
Sbjct: 89 --RWNTQTGECDTIAGGDVHDRIGHPTSAGHIGICDPSMTCFGLHLYDGLFKVIP---TD 143
Query: 810 FELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVN-GRHVKTHEISLKEKEFTKTPWK 868
F+ +A +IR+EEL++ D+QFL+G PTI ++ D RH+KT+ +SLK+K+F P
Sbjct: 144 FKKEAFNIRLEELDVLDIQFLYGHSKPTIAVLYTDSEENRHLKTYTVSLKDKDFGNGPLF 203
Query: 869 QDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANG 928
Q N+E AS++IPVP P+GG +++GQE++ Y SG + ++ Y ++D +G
Sbjct: 204 QGNLESGASMLIPVPTPIGGVVVLGQETVTYISGSGLRGYHSIPVSATIFRAYGRIDKDG 263
Query: 929 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
RYLLGD G L++L+LE+ + TF+ E K+ L G S++ Y+ G
Sbjct: 264 TRYLLGDEKGILYLLVLEQSTSL-STFTETETKITGLKIQTLGETSLPSTIDYLDNG 319
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 146/217 (67%), Gaps = 9/217 (4%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDP-----NTYFVLGTAVVHPEENEPKQGR 1063
+ID EI+H+++L E S+I+ FG+D YFV+GTA + +E EP +GR
Sbjct: 783 LIDDTMMEIVHSYKLEQFETPCSVITVNFGDDAAAKDNQDYFVVGTAYSYADEPEPSRGR 842
Query: 1064 IIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELRLEC 1119
+++F + +L +AE+ KGA YSM FNGK+LAS+NS ++L W+ + L EC
Sbjct: 843 MLVFAVREQRLTLVAERTFKGALYSMDAFNGKILASVNSMLKLVRWSETESGARTLTEEC 902
Query: 1120 SHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE 1179
++ +I L +K GDFIL+GDL+RS++LL YK M G+ E+++RD +P+W+T IE+LD +
Sbjct: 903 TYHGSIFILQIKCLGDFILIGDLVRSVSLLAYKPMNGTIEDVARDIDPSWITVIEMLDLD 962
Query: 1180 LFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
++ AEN +NLF +++S A+++E+R+ L++VG HL
Sbjct: 963 YYISAENCFNLFTLKRNSDASTEEERSRLEKVGEYHL 999
Score = 48.5 bits (114), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLRIIRNGIGI E A +++PG+K +++L S + + L+LSF +RVL L E
Sbjct: 384 DGSLRIIRNGIGIHEQASVEVPGVKELFSLKRSSLSSQHSLLLLSFASESRVLELVSTE 442
>gi|452824087|gb|EME31092.1| DNA damage-binding protein 1 isoform 1 [Galdieria sulphuraria]
Length = 1128
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/521 (43%), Positives = 332/521 (63%), Gaps = 31/521 (5%)
Query: 65 LRGFSSL---GSLWNGWSE------RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKV-- 113
LRG+ S+ +++ + RYLLGD G L++L+LE+ + TF+ E K+
Sbjct: 240 LRGYHSIPVSATIFRAYGRIDKDGTRYLLGDEKGILYLLVLEQSTSL-STFTETETKITG 298
Query: 114 ---ELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPD-ENGTYVSVMESFTNLAP 169
+ LGE S+P + YLDNG V++GS GDSQL++L P E G+++ VME++ NL+P
Sbjct: 299 LKIQTLGETSLPSTIDYLDNGFVYIGSCHGDSQLIRLLSEPHPETGSFLEVMETYPNLSP 358
Query: 170 IIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSP 229
I+D V+D ERQGQGQ+VTCSG K+GSLRIIRNGIGI E A +++PG+K +++L S
Sbjct: 359 IVDFCVMDAERQGQGQVVTCSGAAKDGSLRIIRNGIGIHEQASVEVPGVKELFSLKRSSL 418
Query: 230 KNLDNTLVLSFVGHTRVLTLSGAE-VEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
+ + L+LSF +RVL L E + E F + T YCGNV ++Q+TPS A
Sbjct: 419 SSQHSLLLLSFASESRVLELVSTELMAEANFPVFEMQEPTLYCGNVVGDCIVQITPSKAR 478
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS--EIKQLAHRAL 345
LIS E + V+ W PP+G ISV S N Q++ A TG ++ Y ++ + I + ++++L
Sbjct: 479 LISCEDMSIVNEWHPPSGFRISVASGNSMQLIIATTGGNLIYFDIDANPKRIMEKSYKSL 538
Query: 346 EYEVACLDISPL--SNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII 403
EYE+ LDISPL + +S+ + AVG+WT++S R SLPSL+ + E LG ++I
Sbjct: 539 EYEICSLDISPLGQAGMNLASQAIPSSFVAVGMWTEVSIRFYSLPSLDLIHTEKLGLDVI 598
Query: 404 PRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGR-------LTDKKKVTLGTQPTVLKT 456
RS+L +G Y L ALGDG + + LD ++ L D++++++GTQP L
Sbjct: 599 ARSLLFVTMDGEDYFLAALGDGRLLTYRLDKSAKDTDSEKKFLYDQRQMSIGTQPASLSI 658
Query: 457 FRSLSTTNVFACSDRPTVIYSSN--HKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST 514
F + + +VFA DRPTVI+SS+ KL+ SNVNLR+V +CS ++E++PD LAL T+ +
Sbjct: 659 FETQNALHVFAACDRPTVIHSSSGGGKLLCSNVNLREVTRVCSFSSEAFPDCLALVTEGS 718
Query: 515 FTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
GT+D IQKLHIRT+PLGE PRRIA+ ++ F V+TT+
Sbjct: 719 LLLGTVDNIQKLHIRTIPLGEQPRRIAHLDTHHVFAVLTTK 759
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/297 (40%), Positives = 183/297 (61%), Gaps = 7/297 (2%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+L++ K +R+EI++++ EGL PV E+ +YG+I+VMK R P D +D LF +T++Y +L
Sbjct: 29 DLILGKCSRMEIYSLSSEGLVPVIELPIYGRISVMKLCRFPDDLQDSLFFLTEKYKFAVL 88
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
R + E T A G+V DRIG P+ G I I DP GL LY+GLFK+IP +
Sbjct: 89 --RWNTQTGECDTIAGGDVHDRIGHPTSAGHIGICDPSMTCFGLHLYDGLFKVIP---TD 143
Query: 810 FELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVN-GRHVKTHEISLKEKEFTKTPWK 868
F+ +A +IR+EEL++ D+QFL+G PTI ++ D RH+KT+ +SLK+K+F P
Sbjct: 144 FKKEAFNIRLEELDVLDIQFLYGHSKPTIAVLYTDSEENRHLKTYTVSLKDKDFGNGPLF 203
Query: 869 QDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANG 928
Q N+E AS++IPVP P+GG +++GQE++ Y SG + ++ Y ++D +G
Sbjct: 204 QGNLESGASMLIPVPTPIGGVVVLGQETVTYISGSGLRGYHSIPVSATIFRAYGRIDKDG 263
Query: 929 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
RYLLGD G L++L+LE+ + TF+ E K+ L G S++ Y+ G
Sbjct: 264 TRYLLGDEKGILYLLVLEQSTSL-STFTETETKITGLKIQTLGETSLPSTIDYLDNG 319
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 146/217 (67%), Gaps = 9/217 (4%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDP-----NTYFVLGTAVVHPEENEPKQGR 1063
+ID EI+H+++L E S+I+ FG+D YFV+GTA + +E EP +GR
Sbjct: 783 LIDDTMMEIVHSYKLEQFETPCSVITVNFGDDAAAKDNQDYFVVGTAYSYADEPEPSRGR 842
Query: 1064 IIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELRLEC 1119
+++F + +L +AE+ KGA YSM FNGK+LAS+NS ++L W+ + L EC
Sbjct: 843 MLVFAVREQRLTLVAERTFKGALYSMDAFNGKILASVNSMLKLVRWSETESGARTLTEEC 902
Query: 1120 SHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE 1179
++ +I L +K GDFIL+GDL+RS++LL YK M G+ E+++RD +P+W+T IE+LD +
Sbjct: 903 TYHGSIFILQIKCLGDFILIGDLVRSVSLLAYKPMNGTIEDVARDIDPSWITVIEMLDLD 962
Query: 1180 LFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
++ AEN +NLF +++S A+++E+R+ L++VG HL
Sbjct: 963 YYISAENCFNLFTLKRNSDASTEEERSRLEKVGEYHL 999
Score = 48.5 bits (114), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLRIIRNGIGI E A +++PG+K +++L S + + L+LSF +RVL L E
Sbjct: 384 DGSLRIIRNGIGIHEQASVEVPGVKELFSLKRSSLSSQHSLLLLSFASESRVLELVSTE 442
>gi|290998415|ref|XP_002681776.1| damage-specific DNA binding protein 1 [Naegleria gruberi]
gi|284095401|gb|EFC49032.1| damage-specific DNA binding protein 1 [Naegleria gruberi]
Length = 1103
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/481 (43%), Positives = 311/481 (64%), Gaps = 18/481 (3%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R+ LGD +G+L++L L+ + ++KE LG SI C++YLDNG VF+GS G
Sbjct: 271 RWFLGDQSGQLYLLSLQVSDSEVTGLTLKE-----LGVTSISSCISYLDNGYVFIGSNYG 325
Query: 141 DSQLVKLNRSPD-ENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
DSQ+++++ + E +Y V ++++N+ PI+D VD ++QGQGQ+VTCSG FK+GSLR
Sbjct: 326 DSQVIRISDELNPETNSYFEVFQTYSNIGPIVDFCFVDADKQGQGQIVTCSGAFKDGSLR 385
Query: 200 IIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
II+NGIGIEE I DL G+ IW+L + + + LV+SF G T + ++ E+ E +
Sbjct: 386 IIKNGIGIEELTTISDLVGLNRIWSLKTETGE--EKYLVMSFTGQTLISSVDNEEIGEAK 443
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ GF D T C V LQVT A L+S+ + + W+P +G +IS+ + N Q
Sbjct: 444 IPGFDVDSTTVLCDTVIGNNYLQVTDKTARLVSSHTLELIDEWKPSSG-TISLAASNPTQ 502
Query: 319 VLCATG-CDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
++ + G + Y+E+ +KQ+ L+YEV+C+DISP + +S+ + AVG+W
Sbjct: 503 LVVSLGEGKLVYIEISAQSLKQIQQTKLDYEVSCIDISPEEGKISST------VCAVGMW 556
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
T+IS R+L+LPS + + + LGGEI+PRSILM FEG YL+ LGDG +F F +D G
Sbjct: 557 TEISVRVLTLPSFDILTVQELGGEILPRSILMPTFEGINYLMCGLGDGHLFTFKMDRGMG 616
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTT-NVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMC 496
LTDKK++ G++P +L+ F S NVFA S+RPT+IYS N KLV+SNVNL +VN MC
Sbjct: 617 ILTDKKRIVAGSKPIMLRPFISKDRQLNVFAASERPTIIYSRNQKLVYSNVNLGEVNDMC 676
Query: 497 SLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRI 556
S N ES+P +A+A +++ G IDEIQKLHI+TV L P +I +Q S++ +G++ T+
Sbjct: 677 SFNHESFPFHIAIANENSILIGQIDEIQKLHIKTVQLHAQPTKICHQPSTKAYGLLITQF 736
Query: 557 D 557
+
Sbjct: 737 E 737
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 159/285 (55%), Gaps = 17/285 (5%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T +D+NL++ KN ++++ ++ EG+ V E G+I M FR +K+DLLFI +
Sbjct: 24 TSPSDINLIMCKNQYLQVNRLSEEGVSSVVEFEAPGRIDTMSLFRPSGEKQDLLFITIED 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
+ G I+ L + G++ D +G+ SE+G I IDP R + L +Y GL KII
Sbjct: 84 TFFTLGFIDGKIETL-----SSGSIDDPVGRRSESGSITTIDPLCRAVALSIYEGLLKII 138
Query: 804 PLEKDNFELK-ASSIRMEELEIQDVQFLHGC-----QNPTIICIHQD-VNGRHVKTHEIS 856
P E + + K A ++R+EEL + D+ FL PT ++QD V RHVKT+E+
Sbjct: 139 PFENNKHQFKEAFNVRLEELNVIDIAFLESLGSKSKSGPTFALLYQDHVGSRHVKTYEVK 198
Query: 857 LKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILY--HSGKSYVAVAPQIIK 914
+K+ ++ Q N++ A+++IPVP PLGG I +G+ + Y S K++ +P +
Sbjct: 199 TLDKDMEESSLNQLNVDHGANILIPVPAPLGGVICVGEAQVSYINESNKNHSVASPANSR 258
Query: 915 SSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKE 959
+ I Y K+D R+ LGD +G+L++L L+ + ++KE
Sbjct: 259 MA-IRSYGKLDNT--RWFLGDQSGQLYLLSLQVSDSEVTGLTLKE 300
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 124/223 (55%), Gaps = 10/223 (4%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
E + +D+N FE +L E S+IS KF +D N YF++GTA+ +E EP +G
Sbjct: 740 ETSAIFSLDENNFEKKSEIRLEGNELGQSIISCKFTDDDNEYFIVGTAITEGDEEEPSKG 799
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT-----NEKELRL 1117
RI++ D KL AEK++KGA + FNGKLLA ++ + LF+W + K+L
Sbjct: 800 RILVLQVQDDKLVLKAEKDVKGAVMVLHSFNGKLLAGVSGRLMLFKWAESDDGDNKDLVQ 859
Query: 1118 ECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTME-----GSFEEISRDYNPNWMTS 1172
ECS I L + GDFIL+GD+M+S+ L Y+ E G+ IS+DY +W++
Sbjct: 860 ECSCSGGIYILDIDSHGDFILIGDMMKSVHLFVYENPEEQHVSGNLRLISKDYQYSWLSC 919
Query: 1173 IEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVH 1215
+L++ ++ + N+ +K+ A S+E+R L VG +
Sbjct: 920 SLMLNESEYVAVDQQGNMITLKKNDEAASEEERKQLVRVGKYY 962
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLRII+NGIGIEE I DL G+ IW+L + + + LV+SF G T + ++ E
Sbjct: 381 DGSLRIIKNGIGIEELTTISDLVGLNRIWSLKTETGE--EKYLVMSFTGQTLISSVDNEE 438
Query: 60 WGFHLLRGF 68
G + GF
Sbjct: 439 IGEAKIPGF 447
>gi|307111604|gb|EFN59838.1| hypothetical protein CHLNCDRAFT_29381 [Chlorella variabilis]
Length = 1108
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/462 (46%), Positives = 293/462 (63%), Gaps = 14/462 (3%)
Query: 112 KVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSP---DENGTYVSVMESFTNLA 168
K+E LG + YLD+GVVFVGS GDSQL++L+ SP + ++V V++S NL
Sbjct: 311 KLEPLGRTPAASTIAYLDSGVVFVGSSFGDSQLIRLHSSPPDPSQPTSFVEVLDSQPNLG 370
Query: 169 PIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGS 228
PI+D VVDLERQGQGQ+VTCSG +GSLRI+RNGIG+ E A ++LPGIK +W+L
Sbjct: 371 PIVDFAVVDLERQGQGQVVTCSGTGVDGSLRIVRNGIGVVEQALVELPGIKDLWSLRKTF 430
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGA-EVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAA 287
D LVL+F G TRVL ++ E++E E+ GF S T C N +LQVT +A
Sbjct: 431 MDAHDTYLVLTFSGETRVLGMNAEDELDEAEIPGFNSTALTLCCANTVHDQLLQVTATAF 490
Query: 288 ILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGC-DVYYLEVHGSEIKQLAHRALE 346
L+ ++ V+ WEP I++ + + Q++ A G + YLE+ +I++ L+
Sbjct: 491 RLVDCMTQQLVTQWEPGADGRITIAAASPTQLVAAVGGRTLVYLELGDGQIEEKGRVQLD 550
Query: 347 YEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRS 406
++ACLDI+P+ +SE + AVG W + A + +LPSL + +E L ++IPRS
Sbjct: 551 ADIACLDITPVGELSEASE-----VVAVGSWA-LEAHIFALPSLAPLFREKLPTDVIPRS 604
Query: 407 ILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVF 466
L FEG YL+ LGDG + + LD A G TD+KK+ LGT+P L+TFRS VF
Sbjct: 605 TLFAQFEGDTYLMYGLGDGQLVNYRLD-ADGP-TDRKKIALGTKPISLRTFRSRGAAAVF 662
Query: 467 ACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKL 526
A SDRPTVIYSSN KL++SN+N +V+HM S N ++PDSLAL GTIDEIQKL
Sbjct: 663 AASDRPTVIYSSNRKLLYSNLNENEVSHMTSFNTAAFPDSLALGKQEALLIGTIDEIQKL 722
Query: 527 HIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVR 568
H+RTVPLGE PRRIA+QE+S+TF V T+ I +G VR
Sbjct: 723 HVRTVPLGEQPRRIAHQETSRTFAVTCTQATIS-GEGGDSVR 763
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 147/212 (69%), Gaps = 4/212 (1%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFH 1068
++D+ TFE+L QL E A SL S++ G+DP TY+V+GTA P E EP +GRI +
Sbjct: 764 LVDEQTFELLDRLQLQQHELACSLCSTQLGDDPATYYVVGTAFAPPNEPEPTKGRIFVLA 823
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKE----LRLECSHFNN 1124
GKL + EKE +GA YS+ EF G+LLA INS V++++W + E L ECSH +
Sbjct: 824 AAGGKLCVVCEKETRGAVYSLAEFQGRLLAGINSRVQMYKWLEQGEGGRALVPECSHAGH 883
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
++AL+L +GD ++VGDLM+S+ LL + EG+ E +RD++PNWM+++ +LDD+ ++GA
Sbjct: 884 VLALYLATRGDLVVVGDLMKSIQLLAWGEEEGALELRARDFHPNWMSAVTVLDDDTYMGA 943
Query: 1185 ENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
ENSYNLF ++++ A +DE+R+ L+ VG HL
Sbjct: 944 ENSYNLFTVRRNADAATDEERSRLETVGRYHL 975
Score = 216 bits (549), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 109/271 (40%), Positives = 186/271 (68%), Gaps = 15/271 (5%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T +DLNLV++K+ ++E+H +T EGL+ V ++ LYG++A ++ FR ++ +DLL ++T+
Sbjct: 32 FTAASDLNLVISKSTQLEVHRLTAEGLQGVLDVPLYGRVAALQLFRPASEPRDLLLLLTE 91
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
R +L D ++ E++T+A+G+ SDR+G+ E G I+DP+ R+IGL LY+GLFK+
Sbjct: 92 RNKFCVLGF--DEESGELVTRANGDASDRVGRQVELGQRGIVDPQCRLIGLHLYDGLFKV 149
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVN-GRHVKTHEISLKEKE 861
IP+++ +A ++R++EL++ D+ FL GC PTI +++D RHVKT+E+SL+EKE
Sbjct: 150 IPMDERGGLQEAFNMRLDELKVVDIAFLDGCAAPTIAVLYEDTKEQRHVKTYEVSLREKE 209
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTI--- 918
+ PW+Q N++ AS++IPVP GGA+++G+ + + +AP +++S+ I
Sbjct: 210 LVEGPWQQSNLDAGASMLIPVPAS-GGAMVVGESVVTF--------IAPGVVRSAAIKPT 260
Query: 919 VCYAKVDANGERYLLGDLAGRLFMLLLEKEE 949
+ Y +VD +G R+LL D G L++LLL +EE
Sbjct: 261 LAYGQVDDDGSRFLLSDFLGNLYLLLLLREE 291
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLRI+RNGIG+ E A ++LPGIK +W+L D LVL+F G TRVL ++ +
Sbjct: 397 DGSLRIVRNGIGVVEQALVELPGIKDLWSLRKTFMDAHDTYLVLTFSGETRVLGMNAED 455
>gi|298711490|emb|CBJ26578.1| n/a [Ectocarpus siliculosus]
Length = 1135
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/505 (44%), Positives = 307/505 (60%), Gaps = 32/505 (6%)
Query: 77 GWSE----RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGV 132
GW + R L+ D +G L +++L + +V+ +E LGE S ++YLDNGV
Sbjct: 258 GWVDADGSRLLVSDHSGGLHVVILTPDAT---NTAVETAHIEALGETSCASSISYLDNGV 314
Query: 133 VFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGG 192
VF+GS GDSQL+KLN D GTY+ V+E++ NL PI+DM V DL+RQGQGQ VTCSG
Sbjct: 315 VFIGSASGDSQLIKLNPEKDAQGTYIQVLETYDNLGPILDMCVADLDRQGQGQAVTCSGC 374
Query: 193 FKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGA 252
K+GSLRIIRNGIGI EHA I+L GIKG+W+L S N D LV +F+ TRVL
Sbjct: 375 SKDGSLRIIRNGIGINEHAAIELAGIKGMWSLR-PSNTNHDKYLVQAFISETRVLAFEED 433
Query: 253 E-----VEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGK 307
E + E E+ GF + T +CG V +QVT +LI + + W+PP
Sbjct: 434 EDGDHQLAEGEIAGF-QEGCTLFCGCVGGNMAVQVTKRGVVLICCDGLQEIDRWDPPTDL 492
Query: 308 SISVVSCNKNQVLCAT-GCDVYYLEVHGSEIK--QLAHRALEYEVACLDISPLSNEETS- 363
+I+V S N +V+ A G ++ +LEV + K Q A L+ E+AC+ ++P SN+ S
Sbjct: 493 NITVASGNATRVVLALGGGNLVHLEVDATAKKLVQKARVQLDNEIACISLNPPSNQPVSN 552
Query: 364 SEPAKA-----------QLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF 412
+EPA L AVG+WTD++ RLLSLP L+ V +PLGG+ RS+++
Sbjct: 553 AEPATTAMECDEESKLDSLVAVGMWTDMTVRLLSLPDLQGVSSQPLGGDTQARSVILATI 612
Query: 413 EGHCYLLVALGDGSMFYFSLD---PASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACS 469
YL V LGDG + F L+ ++ L KKV LGTQP L FR+ VF S
Sbjct: 613 ADVHYLFVGLGDGHVVSFPLEVTAESTLALGTPKKVALGTQPVGLACFRNNGMVCVFVAS 672
Query: 470 DRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIR 529
DRP VIY S KL+++NVN+ +VN +CS ++ P LALA++++ T GTID+IQKLHI+
Sbjct: 673 DRPAVIYCSGGKLLYANVNMGEVNSVCSFDSSELPHCLALASENSLTIGTIDDIQKLHIQ 732
Query: 530 TVPLGEAPRRIAYQESSQTFGVITT 554
V LGEAP+RI + +S + FG+ITT
Sbjct: 733 KVSLGEAPQRITHHDSGRMFGIITT 757
Score = 234 bits (598), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/311 (40%), Positives = 192/311 (61%), Gaps = 16/311 (5%)
Query: 677 KDLLFIITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDL 736
K L+ T DLNLV+AK +EI +T EGL+ ++ LYG IA M+ +R + +
Sbjct: 17 KSLVCHFTGPDDLNLVIAKGAHLEIRAITAEGLQHRLDVPLYGAIATMEAYRLADENCER 76
Query: 737 LFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLY 796
+F++T+RY +L+ D+ EI T++ G+V DRIG+ +N I ++DP++R+IGL LY
Sbjct: 77 IFVLTERYQFCVLQY--DVSRQEIRTRSSGSVKDRIGRAIDNSKIGVMDPQSRMIGLHLY 134
Query: 797 NGLFKIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDV-NGRHVKTHEI 855
G FK+IP++ A +IR+EELE+ D+QFL GC TI ++QD N RH+KT+ I
Sbjct: 135 EGYFKVIPMDAKGQLKDAFNIRLEELEVLDIQFLSGCPKATIAVLYQDQRNARHIKTYTI 194
Query: 856 SLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKS 915
S ++KEF PW Q N+E AS +IPVP P GG +I+G ++I YHSGK+++ + I++
Sbjct: 195 STRDKEFDTGPWAQLNVEHNASELIPVPAPFGGVLILGHQTICYHSGKAFITIP---IQN 251
Query: 916 STIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE-HCKGPVV 974
+ + Y VDA+G R L+ D +G L +++L + +V+ +E LGE C
Sbjct: 252 TRMCAYGWVDADGSRLLVSDHSGGLHVVILTPDAT---NTAVETAHIEALGETSCA---- 304
Query: 975 EMSSLSYIKPG 985
SS+SY+ G
Sbjct: 305 --SSISYLDNG 313
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 150/236 (63%), Gaps = 9/236 (3%)
Query: 990 STANQPADFNMEVEVHNLL-IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLG 1048
+T+ + + + E E HN + +D FE L+ H L E S++S F D Y V+G
Sbjct: 756 TTSYRAVENSDEEEEHNFVKFLDDTNFEELYCHPLDAFENGSSMVSCVFANDKKEYLVVG 815
Query: 1049 TAVVHPEENEPKQGRIIIFHYD----DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTV 1104
T V +E EP GR+++F + + K+ AE E +GA Y + FNGKLLA INS V
Sbjct: 816 TGYVREDECEPAVGRLLVFSVEGQGAERKVDLAAEVETRGAVYVLNGFNGKLLACINSKV 875
Query: 1105 RLFEWTNE----KELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEE 1160
+LF W + +EL+ EC + +I+AL ++ +GDFI+VGDLMRS++LL YK ++G+ EE
Sbjct: 876 QLFRWIEKDDGIQELQTECGYHGHILALHMQSRGDFIIVGDLMRSVSLLVYKAVDGAIEE 935
Query: 1161 ISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
++RDY+ NWMT++E+L+D++++G E N+F ++++ A ++E+R L+ G HL
Sbjct: 936 VARDYHANWMTAVEMLNDDVYIGGEADCNIFTLRRNADAATEEERARLEIQGEFHL 991
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
+GSLRIIRNGIGI EHA I+L GIKG+W+L S N D LV +F+ TRVL E
Sbjct: 377 DGSLRIIRNGIGINEHAAIELAGIKGMWSLR-PSNTNHDKYLVQAFISETRVLAFEEDED 435
Query: 61 GFHLL 65
G H L
Sbjct: 436 GDHQL 440
>gi|110741229|dbj|BAF02165.1| UV-damaged DNA binding factor - like protein [Arabidopsis thaliana]
Length = 727
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/375 (52%), Positives = 268/375 (71%), Gaps = 7/375 (1%)
Query: 181 QGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSF 240
QGQGQ+VTCSG FK+GSLR++RNGIGI E A ++L GIKG+W+L + D LV+SF
Sbjct: 1 QGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSF 60
Query: 241 VGHTRVLTLS-GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVS 299
+ TR+L ++ E+EETE+ GF S QT +C + ++QVT ++ L+S+ ++
Sbjct: 61 ISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRD 120
Query: 300 SWEPPNGKSISVVSCNKNQVLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLS 358
W P G +++V + N +QVL ATG + YLE+ ++ ++ H LEYEV+CLDI+P+
Sbjct: 121 EWHAPAGFTVNVATANASQVLLATGGGHLVYLEIGDGKLTEVQHALLEYEVSCLDINPIG 180
Query: 359 NEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYL 418
+ P +QLAAVG+WTDIS R+ SLP L + KE LGGEIIPRS+L+ FEG YL
Sbjct: 181 DN-----PNYSQLAAVGMWTDISVRIFSLPELTLITKEQLGGEIIPRSVLLCAFEGISYL 235
Query: 419 LVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS 478
L ALGDG + F +D +G+L D+KKV+LGTQP L+TF S S T+VFA SDRPTVIYSS
Sbjct: 236 LCALGDGHLLNFQMDTTTGQLKDRKKVSLGTQPITLRTFSSKSATHVFAASDRPTVIYSS 295
Query: 479 NHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPR 538
N KL++SNVNL++V+HMC N+ ++PDSLA+A + T GTID+IQKLHIRT+PLGE R
Sbjct: 296 NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHAR 355
Query: 539 RIAYQESSQTFGVIT 553
RI +QE ++TFG+ +
Sbjct: 356 RICHQEQTRTFGICS 370
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 159/220 (72%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E E+H + ++D TFE + + L EY S++S F ED N Y+ +GTA V PEENEP
Sbjct: 379 ESEMHFVRLLDDQTFEFMSTYPLDSFEYGCSILSCSFTEDKNVYYCVGTAYVLPEENEPT 438
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELR 1116
+GRI++F +DG+LQ IAEKE KGA YS+ FNGKLLA+IN ++L++W +EL+
Sbjct: 439 KGRILVFIVEDGRLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 498
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWM+++EIL
Sbjct: 499 SECGHHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEIL 558
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DD+++LGAEN++NL +K+S +DE+R L+ VG HL
Sbjct: 559 DDDIYLGAENNFNLLTVKKNSEGATDEERGRLEVVGEYHL 598
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 15 DGSLRVVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMN 70
>gi|17541566|ref|NP_502299.1| Protein DDB-1 [Caenorhabditis elegans]
gi|74965443|sp|Q21554.2|DDB1_CAEEL RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|5824558|emb|CAA92824.2| Protein DDB-1 [Caenorhabditis elegans]
Length = 1134
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/555 (40%), Positives = 331/555 (59%), Gaps = 40/555 (7%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
ER+LL D GRL MLLL E G ++VKE +++ LGE SI + + Y+DNGVVFVGSRL
Sbjct: 267 ERFLLSDTDGRLLMLLLNVTESQSG-YTVKEMRIDYLGETSIADSINYIDNGVVFVGSRL 325
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL++L P+ G+Y ++E+++N+ PI DMV+V E GQ QLVTC+G K+GSLR
Sbjct: 326 GDSQLIRLMTEPN-GGSYSVILETYSNIGPIRDMVMV--ESDGQPQLVTCTGADKDGSLR 382
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
+IRNGIGI+E A +DL G+ GI+ + + S N DN +++S T VL ++G E+E+ ++
Sbjct: 383 VIRNGIGIDELASVDLAGVVGIFPIRLDS--NADNYVIVSLSDETHVLQITGEELEDVKL 440
Query: 260 GGFTSDQQTFYC----GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCN 315
+D T + G D +LQ T L+S+ ++ WEP NG+ IS VS N
Sbjct: 441 LEINTDLPTIFASTLFGPNDSGIILQATEKQIRLMSSSGLSKF--WEPTNGEIISKVSVN 498
Query: 316 --KNQVLCATGCDVYYL-----EVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAK 368
Q++ A VY L E+ +I+ A + E E+ACLD+S E K
Sbjct: 499 AANGQIVLAARDTVYLLTCIVDEMGALDIQLTAEKKFENEIACLDLS----NEGDDPNNK 554
Query: 369 AQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMF 428
A + W+ + ++ LP L VC L +IIPRSI+ TC E YLLVA GDG++
Sbjct: 555 ATFLVLAFWSTFAMEVIQLPDLITVCHTDLPTKIIPRSIIATCIEEVHYLLVAFGDGALV 614
Query: 429 YFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVN 488
Y+ D +G + KK +GT+P L R+ + ++F CSDRP +I+S++ KLVFSNVN
Sbjct: 615 YYVFDIKTGTHGEPKKSNVGTRPPSLHRVRNKNRQHLFVCSDRPVIIFSASKKLVFSNVN 674
Query: 489 LRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQT 548
++ V+ +CSL++ +Y D L ++ ++ FGT+D+IQK+H+R++P+GE+ RIAYQ+S+ T
Sbjct: 675 VKLVDTVCSLSSSAYRDCLVISDGNSMVFGTVDDIQKIHVRSIPMGESVLRIAYQKSTST 734
Query: 549 FGVITTRIDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNME 608
+GV + R + S R AS A ++S S K ST+ P +
Sbjct: 735 YGVCSNRTE------SKAERVFASKNA------LVTSQSRPKVASTRADMDESPPN---- 778
Query: 609 VEVHNLLIIDQNTFE 623
+ +++DQNTF+
Sbjct: 779 -TTSSFMVLDQNTFQ 792
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 160/245 (65%), Gaps = 9/245 (3%)
Query: 976 MSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISS 1035
++S S K ST+ P + + +++DQNTF++LH+H+ P E ALS IS
Sbjct: 757 VTSQSRPKVASTRADMDESPPN-----TTSSFMVLDQNTFQVLHSHEFGPWETALSCISG 811
Query: 1036 KFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDD---GKLQQIAEKEIKGACYSMCEF 1092
+F D +TY+V+GT +++P+E E K GRI++F DD KL+++ E ++G+ ++
Sbjct: 812 QFTNDSSTYYVVGTGLIYPDETETKIGRIVVFEVDDVERSKLRRVHELVVRGSPLAIRIL 871
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NGKL+A+INS++RLFEWT +KELRLECS FN++IAL LKV + + V D+MRS++LL Y+
Sbjct: 872 NGKLVAAINSSIRLFEWTTDKELRLECSSFNHVIALDLKVMNEEVAVADVMRSVSLLSYR 931
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKD-SAATSDEDRTHLQEV 1211
+EG+FEE+++D+N WM + E + E LG E NLF + D + +D+ R L+
Sbjct: 932 MLEGNFEEVAKDWNSQWMVTCEFITAESILGGEAHLNLFTVEVDKTRPITDDGRYVLEPT 991
Query: 1212 GTVHL 1216
G +L
Sbjct: 992 GYWYL 996
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 180/307 (58%), Gaps = 18/307 (5%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T ++NL+VA+ NRI++ V+PEGL+ V EI +YG++ + + DK+ L ++T++
Sbjct: 24 TGHENVNLIVARGNRIDVQLVSPEGLKNVCEIPIYGQVLTIALVKCKRDKRHSLIVVTEK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
++ IL R + +++T+A G ++D G+ ++N + ++ +I +R + G K+I
Sbjct: 84 WHMAILAYR----DGKVVTRAAGCIADPTGRATDN-LFSLTIHRNGLIAIRAFEGSVKMI 138
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPT--IICIHQDVNGRHVKTHEISLKEKE 861
E +L+ ++R + + D +F+ ++ + I+ D +G+H++ ++++ +KE
Sbjct: 139 QWESGT-DLRHFNVRFDYPNVSDFKFVDTGEDDVYRVAFIYDDDHGKHLQFSDLNMHDKE 197
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAP---QIIKSSTI 918
F +T +Q +I ++S++IPVP +GG I++G S+LY + V P +++++T
Sbjct: 198 F-RTYSRQASIAADSSVLIPVPHAIGGVIVLGSNSVLYKPNDNLGEVVPYTCSLLENTTF 256
Query: 919 VCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSS 978
C+ VDA+GER+LL D GRL MLLL E G ++VKE +++ LGE S
Sbjct: 257 TCHGIVDASGERFLLSDTDGRLLMLLLNVTESQSG-YTVKEMRIDYLGETSIA-----DS 310
Query: 979 LSYIKPG 985
++YI G
Sbjct: 311 INYIDNG 317
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLR+IRNGIGI+E A +DL G+ GI+ + + S N DN +++S T VL ++G E
Sbjct: 378 DGSLRVIRNGIGIDELASVDLAGVVGIFPIRLDS--NADNYVIVSLSDETHVLQITGEE 434
>gi|308808936|ref|XP_003081778.1| putative UV-damaged DNA binding factor (ISS) [Ostreococcus tauri]
gi|116060244|emb|CAL56303.1| putative UV-damaged DNA binding factor (ISS) [Ostreococcus tauri]
Length = 1282
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/482 (43%), Positives = 292/482 (60%), Gaps = 68/482 (14%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD G L++L+L + K V E K+E LGE SIP ++YLDNGVVFVGS G
Sbjct: 498 RYLLGDHDGTLYLLVLVHDGK-----RVNELKIERLGETSIPSTVSYLDNGVVFVGSAYG 552
Query: 141 DSQLVKL-----NRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKE 195
DSQL+KL N D N +Y+ ++E FTNL PI+D VDLER GQGQ+VTCSG +K+
Sbjct: 553 DSQLIKLHSEKTNVDKDGNLSYIQILEEFTNLGPIVDFAFVDLERHGQGQVVTCSGAYKD 612
Query: 196 GSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE-- 253
GSLR++RNGIGI+E A I LPG+KG+++L +D LV++F+ TR+L G E
Sbjct: 613 GSLRVVRNGIGIDEQAVIQLPGVKGLFSLRDDDESQVDKYLVVTFINETRILGFVGDEGD 672
Query: 254 -VEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVV 312
++ETE+ GF ++ QT CGN
Sbjct: 673 TLDETEISGFNAEAQTLCCGN--------------------------------------- 693
Query: 313 SCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLA 372
+ +G ++ L ++ +A E E+ACLD +P+ E +S P +
Sbjct: 694 -------MLESGGKLHCLSAMKGKLALVASATFEDEIACLDCTPMG--EATSSP----VC 740
Query: 373 AVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSL 432
AVGLW+ + L S+ L + +E G +IIPRS L+ FE YLLV LGDG + + L
Sbjct: 741 AVGLWS-MEIVLASMSDLSVIKRESTGEDIIPRSTLLCSFESIPYLLVGLGDGQLITYLL 799
Query: 433 DPASGRLTDKKKVTLGTQPTVLKTFRSLSTT--NVFACSDRPTVIYSSNHKLVFSNVNLR 490
D SG L+ +KK++LGT+P L+TF+S +T +VFA SDRPTVI+S+N KL++SNVN++
Sbjct: 800 DEKSGELSVRKKLSLGTKPITLQTFKSHATNVHSVFAASDRPTVIFSNNKKLIYSNVNVQ 859
Query: 491 QVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFG 550
+V H+C ++ ++PD+LALA + T G ID+IQKLHIRT+PLG PRRIA+Q + TF
Sbjct: 860 EVLHVCPFSSAAFPDALALAGEEDLTIGGIDDIQKLHIRTIPLGGQPRRIAHQPETNTFA 919
Query: 551 VI 552
V+
Sbjct: 920 VV 921
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/293 (42%), Positives = 189/293 (64%), Gaps = 15/293 (5%)
Query: 681 FIITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRG-PTDKKDLLFI 739
F ++ TDL +VAK R+EI+ ++ GLRP+ ++ +YG++A M G K LFI
Sbjct: 247 FTSSEETDL--IVAKCTRLEIYRLSSSGLRPIMDVPIYGRVATMSLCGGRERGSKGRLFI 304
Query: 740 ITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGL 799
T+RY L D ++ E+ T+A G+V D IG+P+ENG I I+D + R IGL+LY+GL
Sbjct: 305 TTERYGFTALSY--DEESEELKTEAFGDVRDNIGRPAENGQIGIVDEDCRSIGLQLYDGL 362
Query: 800 FKIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVN-GRHVKTHEISLK 858
FK+IP ++ +A +IR+EEL ++D+QFLHG PTI +++D+ H+KT+EI ++
Sbjct: 363 FKVIPCDEKGKVKEAFNIRLEELRVEDIQFLHGTAKPTIAVLYRDMKEAVHIKTYEIGVR 422
Query: 859 EKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKS----YVAVAPQIIK 914
EKEF +PW Q+++E +S +IPVP P+GG +++G+E+I+Y + S A I +
Sbjct: 423 EKEFVSSPWAQNDLEGGSSKIIPVPAPVGGVVVLGEETIVYLNKTSDDTDVFLKAINIPE 482
Query: 915 SSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
S+IVCY +D +G RYLLGD G L++L+L + K V E K+E LGE
Sbjct: 483 RSSIVCYGAIDPDGSRYLLGDHDGTLYLLVLVHDGK-----RVNELKIERLGE 530
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 151/247 (61%), Gaps = 15/247 (6%)
Query: 985 GSTKQSTANQPADFNMEVEVHNLL----------IIDQNTFEILHAHQLFPGEYALSLIS 1034
G + A+QP V V +L ++D +FE L QL E SL S
Sbjct: 903 GGQPRRIAHQPETNTFAVVVEHLWSKSSQDCFVRLVDDGSFETLSQFQLEDQELTSSLTS 962
Query: 1035 SKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNG 1094
F D TY+V+GT + E+EP +GRI++F DD +L ++EKE++GA Y++ F G
Sbjct: 963 CTFAGDSTTYYVVGTGIALETEDEPSRGRILVFKVDDDQLVLVSEKEVRGAVYNLNAFKG 1022
Query: 1095 KLLASINSTVRLFEWTNEK----ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQ 1150
KLLA INS + LF+WT + EL ECSH I+ +K +GD+ILVGDLM+S++LL
Sbjct: 1023 KLLAGINSKLELFKWTPREDEVHELVSECSHHGQIVTFAVKTRGDWILVGDLMKSMSLLL 1082
Query: 1151 YKTMEGSFEEISRDYNPNWMTSIEIL-DDELFLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
YK EG+ +E++RD+N NWMT++ +L DDE +LGAENS NLF ++ A +DE+R+ L+
Sbjct: 1083 YKPEEGAIDEVARDFNANWMTAVAMLDDDETYLGAENSLNLFTVSRNVNAVTDEERSRLE 1142
Query: 1210 EVGTVHL 1216
G HL
Sbjct: 1143 ITGEYHL 1149
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLR++RNGIGI+E A I LPG+KG+++L +D LV++F+ TR+L G E
Sbjct: 612 DGSLRVVRNGIGIDEQAVIQLPGVKGLFSLRDDDESQVDKYLVVTFINETRILGFVGDE 670
>gi|390342012|ref|XP_793599.3| PREDICTED: uncharacterized protein LOC588842 [Strongylocentrotus
purpuratus]
Length = 1161
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/351 (57%), Positives = 247/351 (70%), Gaps = 37/351 (10%)
Query: 72 GSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNG 131
G L N S RYLLGDL GRLF+LLL+KEE MDG +VK+ K+E LGE SI ECLTYLDNG
Sbjct: 193 GRLDNNGS-RYLLGDLTGRLFLLLLDKEESMDGAATVKDLKLEFLGETSIAECLTYLDNG 251
Query: 132 VVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSG 191
VVF+GSRLGDSQLV+LN DE+G+YV++ME+FTNL PI+DM VVDL+RQGQGQLVTCSG
Sbjct: 252 VVFIGSRLGDSQLVRLNTESDESGSYVTMMETFTNLGPIVDMAVVDLDRQGQGQLVTCSG 311
Query: 192 GFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSG 251
+KEGSLRIIRNGIGI EHA IDLPGIKGIW L + D+TLVLSFVG TRV +
Sbjct: 312 AYKEGSLRIIRNGIGIHEHASIDLPGIKGIWPLKVDMNSQFDDTLVLSFVGQTRVKSF-- 369
Query: 252 AEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISV 311
+ +T ++ L+ST +K VS W P +GK+ISV
Sbjct: 370 ---------------------------INYITGASVRLVSTPTKRMVSEWRPQSGKNISV 402
Query: 312 VSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQL 371
SCN QV+CA G D++YLE+ E++Q++ +E+EVACLDI+PL+ + T L
Sbjct: 403 ASCNSKQVVCAAGSDIFYLEIFEGEVRQVSTVTMEHEVACLDITPLTGDFTD-------L 455
Query: 372 AAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVAL 422
AVGLWTDISAR+L +P++E + E LGGEIIPRSIL+ FEG Y+L AL
Sbjct: 456 CAVGLWTDISARILKIPTMESMHVELLGGEIIPRSILLMTFEGQNYILCAL 506
Score = 301 bits (770), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/223 (64%), Positives = 180/223 (80%)
Query: 745 NAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIP 804
N + EC + EI+ KA GNV DRIG+PSE G I IIDPE R+IGLRLY+GLFKIIP
Sbjct: 16 NGCVTECVNENGTEEIIPKAQGNVQDRIGRPSETGPIGIIDPECRMIGLRLYDGLFKIIP 75
Query: 805 LEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTK 864
L++DN ELKA +IR+EEL + DVQFL+GC PTI+ +HQD +GRHVKT+E++L+EKEF +
Sbjct: 76 LDRDNKELKAFNIRLEELNVIDVQFLYGCHQPTIVFLHQDPHGRHVKTYEVNLREKEFNR 135
Query: 865 TPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKV 924
PWKQDN+E EA++VI VP+P GGA+IIGQESI YH G +YVA+AP IK+ST+VCY ++
Sbjct: 136 GPWKQDNVETEATMVIAVPQPYGGALIIGQESITYHKGDNYVAIAPPTIKNSTLVCYGRL 195
Query: 925 DANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
D NG RYLLGDL GRLF+LLL+KEE MDG +VK+ K+E LGE
Sbjct: 196 DNNGSRYLLGDLTGRLFLLLLDKEESMDGAATVKDLKLEFLGE 238
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 42/55 (76%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLRIIRNGIGI EHA IDLPGIKGIW L + D+TLVLSFVG TRV +
Sbjct: 315 EGSLRIIRNGIGIHEHASIDLPGIKGIWPLKVDMNSQFDDTLVLSFVGQTRVKSF 369
>gi|268536658|ref|XP_002633464.1| C. briggsae CBR-DDB-1 protein [Caenorhabditis briggsae]
Length = 1134
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 225/555 (40%), Positives = 333/555 (60%), Gaps = 40/555 (7%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRL MLLL E GT +VKE ++E LGE S+ + + Y+DNGVVFVGSRL
Sbjct: 267 DRFLLADTDGRLLMLLLNIGEGRSGT-TVKEMRIEYLGETSVADSVNYVDNGVVFVGSRL 325
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL++L +P+ G+Y V+E++TN PI DMV+V E GQ QLVTCSG K+GSLR
Sbjct: 326 GDSQLIRLMTAPN-GGSYSVVLETYTNTGPIRDMVLV--ESDGQPQLVTCSGADKDGSLR 382
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
+IRNGIGIEE A +DL + G++ + + S DN +++S T VL ++G E+E+ ++
Sbjct: 383 VIRNGIGIEELASVDLAKVIGMFPIRLRS--TTDNFVIVSLPDETHVLKITGEELEDVQL 440
Query: 260 GGFTSDQQTFYCGNV----DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCN 315
+++ T Y ++ D +LQVT +S + + ++ W P NG+S+S VS N
Sbjct: 441 LEIETERTTMYASSLFGPDDSELILQVTEEEIRFMSFQKQVKI--WRPTNGESVSKVSVN 498
Query: 316 K--NQVLCATGCDVYYL-----EVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAK 368
Q++ A VYYL E +I+ +A R E E+ACLDIS E
Sbjct: 499 AIHGQIVVAARDTVYYLKCMVDEAGALDIQIVAERKFEAEIACLDIS----NEGDDYKKP 554
Query: 369 AQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMF 428
+ LW S ++ L L+ C+ L +I+PRSI+ TC E YLLVA GDG++
Sbjct: 555 GTFMVLALWGSFSMEVVQLSDLKTACQTNLPSKIVPRSIVATCIEDVHYLLVAFGDGALI 614
Query: 429 YFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVN 488
Y+ D +G + KK ++GT+P L R+ + ++F CSDRP +I+S+N KLVFSNVN
Sbjct: 615 YYVFDIKTGTHGEAKKSSVGTRPPSLHRVRNKNRQHLFVCSDRPVIIFSANKKLVFSNVN 674
Query: 489 LRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQT 548
++ VN +CSL++ SY D L ++ ++ FGT+D+IQK+HIR++P+GE+ RIAYQ+S+ T
Sbjct: 675 VKVVNTVCSLSSTSYRDCLVISDGNSMVFGTVDDIQKIHIRSIPMGESVMRIAYQKSTGT 734
Query: 549 FGVITTRIDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNME 608
+GV ++R + + P R AS A +S S K +T+ + P
Sbjct: 735 YGVCSSRSETK------PERVYASKNA------LANSQSRAKIVATRNEVNDGPP----- 777
Query: 609 VEVHNLLIIDQNTFE 623
+ +I+DQNTF+
Sbjct: 778 ASTSSFMILDQNTFQ 792
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 150/215 (69%), Gaps = 4/215 (1%)
Query: 1006 NLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRII 1065
+ +I+DQNTF++LHAH+ P E A+S IS +F +D Y+++GT +++P+E++ K GRII
Sbjct: 782 SFMILDQNTFQVLHAHEFGPFEAAVSCISGQFSDDARQYYIVGTGLIYPDESDTKLGRII 841
Query: 1066 IFHYDD---GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHF 1122
+F DD KL+++ E ++G+ ++ NGKL+A+INS+VRLFEWT +K LRLECS+F
Sbjct: 842 VFEVDDVERTKLRRVHELVVRGSPLALRILNGKLVAAINSSVRLFEWTADKVLRLECSNF 901
Query: 1123 NNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFL 1182
N+I+AL LKV + + V DLMRS++LL Y+ MEG+FEE+++D+N WM + E + E L
Sbjct: 902 NHIVALDLKVMNEEVAVADLMRSVSLLSYRMMEGNFEEVAKDWNSEWMVTCEFITAESIL 961
Query: 1183 GAENSYNLFICQKD-SAATSDEDRTHLQEVGTVHL 1216
G E N+F + D S +D+ R L+ G +L
Sbjct: 962 GGEAHLNMFTVEVDKSRPITDDGRYVLEPTGYWYL 996
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 170/289 (58%), Gaps = 13/289 (4%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T + +++L+VA+ NRI++ VTPEGL+ + EI +YG+++ + + +K+ L ++T +
Sbjct: 24 TGQDNVDLIVARGNRIDVQLVTPEGLKNICEIPIYGQVSTISLIKFRREKQHSLVVVTDK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
+N +L R + +++T+A G++++ G+ ++ + I + +I + Y G K++
Sbjct: 84 FNLAVLGYR----DGKVITRAAGSIAEYSGRSADTAVAMTIH-RSGLIAIIGYEGSVKMV 138
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPT--IICIHQDVNGRHVKTHEISLKEKE 861
E +++ ++R + + D +F+ + T + I+ D +G+H++ ++++ +KE
Sbjct: 139 HWEP-GADVRHFNVRFDYPNVSDFKFVDTGDDDTVRVAFIYDDDHGKHLQFSDLNMHDKE 197
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAP---QIIKSSTI 918
F T KQ I ++ ++IPVP P+GG I++G S LY + V P ++K++
Sbjct: 198 F-HTFSKQSCIAADSQVLIPVPAPVGGVIVLGANSALYKASDVNGDVVPYSCSLLKNTIF 256
Query: 919 VCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
C+ VDA+G+R+LL D GRL MLLL E GT +VKE ++E LGE
Sbjct: 257 TCHGIVDASGDRFLLADTDGRLLMLLLNIGEGRSGT-TVKEMRIEYLGE 304
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLR+IRNGIGIEE A +DL + G++ + + S DN +++S T VL ++G E
Sbjct: 378 DGSLRVIRNGIGIEELASVDLAKVIGMFPIRLRS--TTDNFVIVSLPDETHVLKITGEE 434
>gi|412992547|emb|CCO18527.1| predicted protein [Bathycoccus prasinos]
Length = 1275
Score = 371 bits (953), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 206/496 (41%), Positives = 295/496 (59%), Gaps = 26/496 (5%)
Query: 76 NGWSERYLLGDLAGRLFMLLLEKEEKMDGTFS-VKEPKVELLGEISIPECLTYLDNGVVF 134
N +R+L+ D G L++L+L K + S V + +E LG+ S ++YLDN VVF
Sbjct: 398 NQLVDRFLIADEDGDLYLLMLSKGTTSTMSTSIVSKLTIERLGKTSSASAMSYLDNSVVF 457
Query: 135 VGSRLGDSQLVKLN--------RSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQL 186
+GS GDSQ++KL+ + +E +YV V+E FTNL PI+D V+DLER GQGQL
Sbjct: 458 IGSAYGDSQIIKLHTEQVNTMMSASNELPSYVEVLEEFTNLGPIVDFCVMDLERHGQGQL 517
Query: 187 VTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRV 246
VTCSG GSLR+IRNGIGI E A I L GIKG+++ LD+ L++SF+ TR+
Sbjct: 518 VTCSGVGTSGSLRVIRNGIGIREQAQISLSGIKGLYSCKRDETMPLDSYLIVSFIAETRI 577
Query: 247 LTLS-GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPN 305
L ++ E+EE GF + QT C N+ + QVT + S V+SW P +
Sbjct: 578 LAINDNDELEEAVFPGFDASSQTIECANISGNVICQVTSKGVYVCDASSGELVASWVPSD 637
Query: 306 GKSISVVSCNKNQVLCAT-GCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSS 364
I+ S ++N + AT G +++YL G +I + + E++C+D +
Sbjct: 638 ESPITASSASENTIAVATVGGNLHYLSFQGGKISETGKMTFDAEISCID---------KT 688
Query: 365 EPAKAQLAAVGLWTDISARLLSLPSLEEVCK-EPLGGEIIPRSILMTCFEGHCYLLVALG 423
+ + AVGLW+ L+ L S +VC E L +++PRS L FE YLL LG
Sbjct: 689 QCGDRNVCAVGLWS-TKVLLVELGSGMKVCHTENLSLDVVPRSTLFCFFEDTIYLLTGLG 747
Query: 424 DGSMFYFSLDPASGR----LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
DG + +D +S L+D+K V+LGTQP LK F+S + +VFA SDRPT+IYS++
Sbjct: 748 DGHLITNVVDSSSSAGGFALSDRKSVSLGTQPVTLKLFKSQHSMHVFAGSDRPTIIYSNS 807
Query: 480 HKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRR 539
KLV+SNVNL +V H+ N +++PD+LALA+ T G +D+IQKLHIRTVPL E PRR
Sbjct: 808 KKLVYSNVNLNEVLHVAPFNCDAFPDALALASGEHLTIGAVDDIQKLHIRTVPLREQPRR 867
Query: 540 IAYQESSQTFGVITTR 555
IA+Q ++T V+T +
Sbjct: 868 IAHQPETKTLAVLTMK 883
Score = 186 bits (472), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 146/251 (58%), Gaps = 35/251 (13%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPE-ENEPKQGRIIIF 1067
+ D TFE L + L P E S+IS F D + YFV+GTA P E E +GRI++F
Sbjct: 898 LFDNKTFETLAKYPLEPNENDASIISCSFDGDDDIYFVVGTAFADPHSEPESSRGRILVF 957
Query: 1068 H------------------YDDGK-----------LQQIAEKEIKGACYSMCEFNGKLLA 1098
+ DG+ L + EKE +GA Y++ F GKLLA
Sbjct: 958 KVSNTSSSGGGNAVVNGNDHGDGRASASSSVLQKSLTLVCEKETRGAVYNLNAFCGKLLA 1017
Query: 1099 SINSTVRLFEW----TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTM 1154
INS V+LF W N++EL ECSH +IIAL ++ K + I+VGDLM+S+TLLQY+
Sbjct: 1018 GINSLVKLFNWGVSKENKRELVHECSHMGHIIALKVETKDNLIVVGDLMKSITLLQYQRE 1077
Query: 1155 EGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTV 1214
G EE++ D++ NWMT++EILDD +LGAE+SYNLF Q+++ A +++ R L+ G
Sbjct: 1078 SGRIEEVAHDFSSNWMTAVEILDDNTYLGAESSYNLFTVQRNADADTEDKRGTLELCGAF 1137
Query: 1215 HLVGDGLVQCR 1225
HL GD + + R
Sbjct: 1138 HL-GDSVNRFR 1147
Score = 103 bits (256), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 95/154 (61%), Gaps = 8/154 (5%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPT--DKKDL---LFIITQ-R 743
NL+VA++NRIEI+ +T EGL PV E +YG+IA++K G D++++ L ++T+ R
Sbjct: 53 NLIVARSNRIEIYLLTEEGLEPVLETTVYGRIAMLKLCEGRKNGDRENIPGRLVVVTEDR 112
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y+ +L + L T + G+VSD G+P E+G++ ID ARVI L +Y+GL K I
Sbjct: 113 YSLAVLSYDAATNTLR--TVSSGDVSDLTGRPVEHGMLGDIDRNARVIALHIYDGLIKFI 170
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPT 837
P +++ L+A + + EL++ D FL + T
Sbjct: 171 PFDENGNLLQAFNANLNELKVLDFVFLPSTSSST 204
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 139/297 (46%), Gaps = 42/297 (14%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPT--DKKDL--- 679
+FT NL+VA++NRIEI+ +T EGL PV E +YG+IA++K G D++++
Sbjct: 45 HFTHLERQNLIVARSNRIEIYLLTEEGLEPVLETTVYGRIAMLKLCEGRKNGDRENIPGR 104
Query: 680 LFIITQ-RTDLNLVVAKNNRIEIHTVTPEGL-----RPVK-----EIFLYGKIAVMKFFR 728
L ++T+ R L ++ + TV+ + RPV+ +I ++ + +
Sbjct: 105 LVVVTEDRYSLAVLSYDAATNTLRTVSSGDVSDLTGRPVEHGMLGDIDRNARVIALHIYD 164
Query: 729 G-----PTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAI 783
G P D+ L Q +NA +++ L++L D + PS + +
Sbjct: 165 GLIKFIPFDENGNLL---QAFNA-------NLNELKVL--------DFVFLPSTSSSTSG 206
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQ 843
I +A G N L S + ++ P I +H+
Sbjct: 207 IAIDASEYGNNNN--NNNNNNASDMNITLSNVSSLTRSINRENAGGGGLSSMPVIAVLHK 264
Query: 844 DV-NGRHVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
DV + RHV T+ ++L++++ P++Q +E+ + ++ + P+GG +++G+E+I Y
Sbjct: 265 DVKDERHVSTYRVNLRDRDLEPGPFEQREVEIGSKKLLALSSPIGGCVVVGEETIAY 321
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 2 GSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
GSLR+IRNGIGI E A I L GIKG+++ LD+ L++SF+ TR+L ++
Sbjct: 527 GSLRVIRNGIGIREQAQISLSGIKGLYSCKRDETMPLDSYLIVSFIAETRILAIN 581
>gi|194377326|dbj|BAG57611.1| unnamed protein product [Homo sapiens]
Length = 451
Score = 370 bits (950), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 197/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 86 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 145
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 146 MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 205
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 206 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 265
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 266 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 311
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 41/47 (87%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFR 671
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFR 68
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 37/46 (80%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFR 728
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR
Sbjct: 23 FTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFR 68
>gi|384080885|dbj|BAM11105.1| damage-specific DNA binding protein 1, 127kDa, partial
[Siebenrockiella crassicollis]
Length = 364
Score = 370 bits (950), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 198/226 (87%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 104 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 163
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI++FHY DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 164 MVYPEEAEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 223
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL++K KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 224 AEKELRTECNHYNNIMALYVKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 283
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 284 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 329
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 101/136 (74%), Gaps = 9/136 (6%)
Query: 489 LRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQT 548
L++VN+MC LN++ YPDSLALA +ST T GTIDEIQKLHIRTVPL E+PR+I YQE SQ
Sbjct: 2 LKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQC 61
Query: 549 FGVITTRIDIQEAD-GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNM 607
FGV+++RI++Q+A G+T +RPSASTQA +++ S+ STA F
Sbjct: 62 FGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSK--------LFSSSTAPHETSFGE 113
Query: 608 EVEVHNLLIIDQNTFE 623
EVEVHNLLIIDQ+TFE
Sbjct: 114 EVEVHNLLIIDQHTFE 129
>gi|74208347|dbj|BAE26370.1| unnamed protein product [Mus musculus]
Length = 599
Score = 369 bits (946), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 196/226 (86%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA F EVEVHNLLIIDQ+TFE+LHAHQ EYALSL+S K G+DPNTYF++GTA
Sbjct: 234 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA 293
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V+PEE EPKQGRI +F Y DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 294 MVYPEEAEPKQGRIAVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 353
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNWM
Sbjct: 354 TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 413
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 414 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 459
Score = 275 bits (702), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/273 (56%), Positives = 191/273 (69%), Gaps = 26/273 (9%)
Query: 413 EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRP 472
E YLL ALGDG++FYF L+ +G L+D+KKVTLGTQPTVL+TFRSLSTTNVFACSDRP
Sbjct: 56 ESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRP 115
Query: 473 TVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVP 532
TVIYSSNHKLVFSNVNL++VN+MC LN++ YPDSLALA +ST T GTIDEIQKLHIRTVP
Sbjct: 116 TVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVP 175
Query: 533 LGEAPRRIAYQESSQTFGVITTRIDIQEAD-GSTPVRPSASTQAQNTTSSTISSLSYIKP 591
L E+PR+I YQE SQ FGV+++RI++Q++ G+T +RPSASTQA +++ S+
Sbjct: 176 LYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSK------- 228
Query: 592 GSTKQSTANQPADFNMEVEVHNLLIIDQNTFE-----RNFTSSTDLNLVVAKNNR----- 641
STA F EVEVHNLLIIDQ+TFE + + L+LV K +
Sbjct: 229 -LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTY 287
Query: 642 --IEIHTVTPEGLRPVKEIFLYGKIAVMKFFRG 672
+ V PE P + G+IAV ++ G
Sbjct: 288 FIVGTAMVYPEEAEPKQ-----GRIAVFQYSDG 315
>gi|341884150|gb|EGT40085.1| CBN-DDB-1 protein [Caenorhabditis brenneri]
Length = 1134
Score = 367 bits (941), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 222/555 (40%), Positives = 328/555 (59%), Gaps = 40/555 (7%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
ER+++ D GRL MLLL E G SVKE +++LLG+ S+ E + Y+DNGVVF+GSR
Sbjct: 267 ERFIVSDTDGRLLMLLLNAVENQSG-LSVKEIRIDLLGDTSVAESINYIDNGVVFIGSRF 325
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL++L S N +Y+SV++++ N+ PI DM++V E GQ QLVTCSG K+GSLR
Sbjct: 326 GDSQLIRL-LSEKTNSSYISVLDTYYNIGPIRDMIMV--ESDGQPQLVTCSGAEKDGSLR 382
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
+IRNGIGIEE A +DLPG+ GI+ + + S + DN +++S V T VL ++G E+E+ +
Sbjct: 383 VIRNGIGIEELATVDLPGVVGIFPIRLDS--SADNYVIVSLVEETHVLQITGEELEDVQF 440
Query: 260 GGFTSDQQTFYCGNV----DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCN 315
+ T + G + D V+QVT L+S ++ WEP NG+ IS V+ N
Sbjct: 441 LQIDTALPTMFAGTLFGPNDSGLVVQVTERQVRLMSNGGLSKF--WEPANGEMISKVAVN 498
Query: 316 --KNQVLCATGCDVYYL-----EVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAK 368
QV A VY+L E+ +I +A + E E+ACLDIS E
Sbjct: 499 AVSGQVCVAARDHVYFLSCIVDEMGALDISVIAEKQFEDEIACLDIS----NEGDDADKP 554
Query: 369 AQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMF 428
A + W S ++ LP L+ VC+ L I+PRSI+ TC E YLLVA GDG++
Sbjct: 555 ATFMVLAFWRTFSMEVVQLPDLKTVCQTDLPSRIVPRSIIATCIEDVHYLLVAFGDGALT 614
Query: 429 YFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVN 488
Y+ D +G + KK ++GT+P L R+ + ++F CSDRP +I+SS+ KLVFSNVN
Sbjct: 615 YYVFDIKTGTHGEPKKSSVGTRPPSLHRVRNKNRQHLFVCSDRPMIIFSSSKKLVFSNVN 674
Query: 489 LRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQT 548
++ VN +CS+++ Y D L ++ + FGT+D+IQK+H+RT+P+GE+ R+A+Q+SS T
Sbjct: 675 VKVVNTVCSMSSRVYRDCLVISDGNCMVFGTVDDIQKVHVRTIPMGESVLRVAHQKSSGT 734
Query: 549 FGVITTRIDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNME 608
+GV ++R D + R +AS A SLS K +T+ P
Sbjct: 735 YGVCSSRTDTRFE------RITASKSAIG------KSLSKPKVTATRNDMNETPPK---- 778
Query: 609 VEVHNLLIIDQNTFE 623
+ +++D NTF+
Sbjct: 779 -STSSFIVLDHNTFQ 792
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 168/273 (61%), Gaps = 10/273 (3%)
Query: 949 EKMDGTFSVKEPKVELLGEHCKGPVVEM-SSLSYIKPGSTKQSTANQPADFNMEVEVHNL 1007
+K GT+ V + + E + SLS K +T+ P +
Sbjct: 729 QKSSGTYGVCSSRTDTRFERITASKSAIGKSLSKPKVTATRNDMNETPPK-----STSSF 783
Query: 1008 LIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIF 1067
+++D NTF++LH+H P E A+S+IS +F +D N+Y+++GTA+V+P+E+E K GRII+F
Sbjct: 784 IVLDHNTFQVLHSHTFGPHETAVSVISGQFNDDNNSYYIVGTALVYPDESETKIGRIIVF 843
Query: 1068 HYDDG---KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNN 1124
D+ KL+ + E ++GA + NGKL+A+INS+VR+FEWT EKELR+ECS FN+
Sbjct: 844 EVDETDKTKLRFMTEIVVRGAPMGIRILNGKLVAAINSSVRMFEWTAEKELRVECSTFNH 903
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I A+ LKV + I V D+MRS++LL Y+T+EG+FEE+++D+N WM + E + E LG
Sbjct: 904 IAAVDLKVLNEEIAVADVMRSVSLLSYRTLEGNFEEVAKDWNSEWMVTCEFITAESILGG 963
Query: 1185 ENSYNLFICQKD-SAATSDEDRTHLQEVGTVHL 1216
E N+F + D S +D+ R L+ G +L
Sbjct: 964 EAHLNMFTVEVDKSRPVTDDGRYVLEPTGYWYL 996
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 172/307 (56%), Gaps = 18/307 (5%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T ++NL+VA+ N I++ V+PEGL+ V +I +YG++ + + D + L ++T++
Sbjct: 24 TGHENVNLIVARGNTIDVQLVSPEGLKNVCQIPIYGQVLSLALVKAKRDSRQSLVVLTEK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
++ IL R + I+T+A G + D G+ +N + + +I ++ + G+ K+I
Sbjct: 84 WHMSILAYR----DGAIVTRAAGCILDPTGRTVDNFFTLSVH-RSGLIAIKAFEGIVKLI 138
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIIC--IHQDVNGRHVKTHEISLKEKE 861
E +L+ ++R + + + +F+ ++ I +D NG+H++ ++++ +KE
Sbjct: 139 QWEA-GADLRHFNVRFDFPNVSEFKFVDTTEDDVYRAAFIFEDDNGKHLQFSDLNMHDKE 197
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQ---IIKSSTI 918
F + +Q +I ++S++IPVP P+ G +++G S+LY S ++ V P +++++
Sbjct: 198 F-RPHLRQTSIAADSSMLIPVPSPISGVVVLGTHSLLYKSSENDGEVVPYSSPLLENTIF 256
Query: 919 VCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSS 978
++ VD GER+++ D GRL MLLL E G SVKE +++LLG+ S
Sbjct: 257 TSHSIVDPTGERFIVSDTDGRLLMLLLNAVENQSG-LSVKEIRIDLLGDTSVA-----ES 310
Query: 979 LSYIKPG 985
++YI G
Sbjct: 311 INYIDNG 317
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLR+IRNGIGIEE A +DLPG+ GI+ + + S + DN +++S V T VL ++G E
Sbjct: 378 DGSLRVIRNGIGIEELATVDLPGVVGIFPIRLDS--SADNYVIVSLVEETHVLQITGEE 434
>gi|308477185|ref|XP_003100807.1| CRE-DDB-1 protein [Caenorhabditis remanei]
gi|308264619|gb|EFP08572.1| CRE-DDB-1 protein [Caenorhabditis remanei]
Length = 1154
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 227/582 (39%), Positives = 346/582 (59%), Gaps = 58/582 (9%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
ER++L D GRL ML+L E G +VK+ ++E LGE SI + + Y+D GVVFVGSRL
Sbjct: 267 ERFILSDTEGRLLMLILNIGEGRSG-ITVKDMRIEYLGETSIADSINYIDAGVVFVGSRL 325
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL++L +P G+Y V+E+++N+ PI DM++V E GQ QLVTCSG K+GSLR
Sbjct: 326 GDSQLIRLMPTP-SGGSYSVVLETYSNIGPIRDMIMV--ESDGQAQLVTCSGAEKDGSLR 382
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
+IRNGIGIEE A ++L G+ GI+ + + S DN +++S T VL ++G E+E+ ++
Sbjct: 383 VIRNGIGIEELASVELAGVIGIFPIRLNS--TTDNYVIVSLAEETHVLQINGEELEDVQL 440
Query: 260 GGFTSDQQTFYCGNV----DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCN 315
++ T + + + +LQVT ++ +++ WEPPNG+ IS VS N
Sbjct: 441 LQICTEMPTIFASTIFGPDNSEVLLQVTEKHVRFMAFSGLSKI--WEPPNGELISKVSVN 498
Query: 316 K--NQVLCATGCDVYYL-----EVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAK 368
Q++ A VY+L E+ G +I +A R E E+ACLDIS ++ T +P
Sbjct: 499 AIHGQIVVAARDTVYFLLCVIEEMGGLDINLVAERKFEDEIACLDISNEGDDHT--KPGT 556
Query: 369 AQLAAVGLWTDISARLLSLPSLE------------------EVCKEPLGGEIIPRSILMT 410
+ A LW+ ++ LP L+ +VC+ L +I+PRSI+ T
Sbjct: 557 FMVLA--LWSTFCMEVVQLPDLKTVSCERRSLLETVLSYLSQVCQTNLPSKIVPRSIVAT 614
Query: 411 CFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSD 470
C E YLL+A GDG++ Y+ D +G + KK ++GT+P L R+ + ++F CSD
Sbjct: 615 CIEEVHYLLIAFGDGALVYYVFDIKTGTHGEAKKSSVGTRPPTLYRVRNKNRQHLFVCSD 674
Query: 471 RPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRT 530
RP +I+SS+ KLVFSNVN++ VN +CSL++ SY D L ++ + FGT+D+IQK+H+R+
Sbjct: 675 RPVIIFSSSKKLVFSNVNVKVVNTVCSLSSSSYCDCLVISDGISMVFGTVDDIQKIHVRS 734
Query: 531 VPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIK 590
+P+GE+ RIAYQ SS T+GV ++R + S R AS A T++S +
Sbjct: 735 IPMGESVLRIAYQRSSGTYGVCSSRTE------SKRERIYASKNAIYTSNS--------R 780
Query: 591 PGSTKQSTANQPADFNMEVEVHNLLIIDQNTFERNFTSSTDL 632
P T ST N+ D N + +++DQNTF+R+ + S ++
Sbjct: 781 PKIT--STRNEAND-NPPKSTSSFMVLDQNTFQRSGSFSNNI 819
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 148/239 (61%), Gaps = 19/239 (7%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFE--------ILHAHQLFPGEYALSLISSKFGEDP 1041
ST N+ D N + +++DQNTF+ I + +F S IS +F D
Sbjct: 785 STRNEAND-NPPKSTSSFMVLDQNTFQRSGSFSNNIRKTYMIF------SCISGQFTNDS 837
Query: 1042 NTYFVLGTAVVHPEENEPKQGRIIIFHYDD---GKLQQIAEKEIKGACYSMCEFNGKLLA 1098
Y+++GT +++PEE + K GRI++F D+ KL+++ + +G+ ++ NGKL+A
Sbjct: 838 KVYYIVGTGLIYPEETDTKFGRIVVFEVDEVERSKLRRVHDLVCRGSPLALRILNGKLVA 897
Query: 1099 SINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSF 1158
+INS+VRLFEWT +KELRLECS+FN+I+AL LKV + + V D+MRS++LL Y+ +EG+F
Sbjct: 898 AINSSVRLFEWTMDKELRLECSNFNHIMALDLKVMNEEVAVADVMRSVSLLSYRMLEGNF 957
Query: 1159 EEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKD-SAATSDEDRTHLQEVGTVHL 1216
EE+++D+N WM + E + E LG E NLF + D S +D+ R L+ G +L
Sbjct: 958 EEVAKDWNSEWMVTCEFITAEQILGGEAHLNLFTVEVDKSRPITDDGRYVLEPTGYYYL 1016
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 172/302 (56%), Gaps = 18/302 (5%)
Query: 689 LNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMI 748
+NL+VA+ NRI++ V+PEGL+ V EI +YG++ M R +K+ L ++T+++ +
Sbjct: 29 VNLIVARGNRIDVQLVSPEGLKNVCEIPIYGQVLTMALVRCKREKRQSLVVVTEKWQMAV 88
Query: 749 LECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
L R + +++T+ G ++D+ G+ S+N + ++ + ++ +R Y G K+I E
Sbjct: 89 LTYR----DGKVITRTAGALADQSGRASDN-LFSLTIHRSGLVAIRAYEGSVKMIQWEPG 143
Query: 809 NFELKASSIRMEELEIQDVQFLHGCQNPT--IICIHQDVNGRHVKTHEISLKEKEFTKTP 866
++++ ++R + + D +F+ + T I I+ D +G+H++ ++++ +KE T
Sbjct: 144 T-DVRSFNVRFDYPNVSDFKFIDTGVDDTYRIAFIYDDDHGKHLQFSDLNMHDKEL-HTF 201
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGK---SYVAVAPQIIKSSTIVCYAK 923
+Q +I +AS++IPVP P+ G +++ SILY S V A ++ ++ C+
Sbjct: 202 SRQASIAADASVLIPVPAPISGVLVLAANSILYKSSDVNGDVVPYASPLLDNTVFTCHGL 261
Query: 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIK 983
VD +GER++L D GRL ML+L E G +VK+ ++E LGE S++YI
Sbjct: 262 VDPSGERFILSDTEGRLLMLILNIGEGRSG-ITVKDMRIEYLGETSIA-----DSINYID 315
Query: 984 PG 985
G
Sbjct: 316 AG 317
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
+GSLR+IRNGIGIEE A ++L G+ GI+ + + S DN +++S T VL ++G E
Sbjct: 378 DGSLRVIRNGIGIEELASVELAGVIGIFPIRLNS--TTDNYVIVSLAEETHVLQINGEE 434
>gi|224587439|gb|ACN58665.1| DNA damage-binding protein 1 [Salmo salar]
Length = 444
Score = 362 bits (929), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 161/227 (70%), Positives = 196/227 (86%)
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGT 1049
ST+ F EVEVH+LL++DQ+TFE+LHAHQ EYALS++S + G D + YF++GT
Sbjct: 78 STSPHETSFGEEVEVHSLLVVDQHTFEVLHAHQFLQSEYALSMVSCRLGRDLSVYFIVGT 137
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
A+V+PEE EPKQGRII+FHY DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EW
Sbjct: 138 AMVYPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMMEFNGKLLASINSTVRLYEW 197
Query: 1110 TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
T EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEG+FEEI+RD+NPNW
Sbjct: 198 TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 257
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
M+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 258 MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHL 304
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 80/112 (71%), Gaps = 9/112 (8%)
Query: 513 STFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGST-PVRPSA 571
ST T GTIDEIQKLHIRTVPL E+PRRI YQE SQ FGV+++R+++Q+A G+T VRPSA
Sbjct: 1 STLTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEMQDASGTTAAVRPSA 60
Query: 572 STQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFE 623
STQA +++ S+ ST+ F EVEVH+LL++DQ+TFE
Sbjct: 61 STQALSSSVSSSKLF--------PSSTSPHETSFGEEVEVHSLLVVDQHTFE 104
>gi|328770638|gb|EGF80679.1| hypothetical protein BATDEDRAFT_11194 [Batrachochytrium
dendrobatidis JAM81]
Length = 1098
Score = 362 bits (928), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 197/476 (41%), Positives = 290/476 (60%), Gaps = 16/476 (3%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD G+L++L + + + +E K+ +G+ LTYL +G +FV S G
Sbjct: 268 RYLLGDYEGQLYILAI-----IFANGTARELKMTPVGQTVQASSLTYLTDGYLFVASHFG 322
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DS+L + G +++ ++F+NLAPI D VVD+E+QGQ Q+V CSG ++GS+RI
Sbjct: 323 DSELYLIVPEDANTGNVLTLCKTFSNLAPISDFCVVDIEKQGQAQIVACSGAQRDGSIRI 382
Query: 201 IRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
IRNGIG+EE +D + + G+WAL S DN LVLSF+G TR+ L G + E +M
Sbjct: 383 IRNGIGVEEIGQLDDMEELTGVWALKPYSAARHDNVLVLSFIGETRLQKLDGDSMAEMDM 442
Query: 260 -GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
G F + ++T +C N+ V+Q+T + +++ E V+ W G S++ S +N
Sbjct: 443 LGNFKTAERTLWCQNLSSDMVVQITSQSITILTIEGWTTVAEWCFDLGASVTHASVYQNM 502
Query: 319 VLCATGCDVYYL-EVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
+L + G + +L E + E+ ++ EV+CL I + E L AVG W
Sbjct: 503 ILVSLGGGMIHLFEFNDRELVMKRSIQIQVEVSCLHICKM-------EELNVCLCAVGCW 555
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
D S RLL +P L E+ KE L G+ IPRSIL+ F+ YLLV+LGDG +F F + S
Sbjct: 556 EDNSVRLLKIPDLSEIQKEILPGDTIPRSILLVEFDNLPYLLVSLGDGQLFNFRIGK-SL 614
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
+L D+KK+TL TQP L+TF+S T+VFA SDRPTVI+ + +L++SNVN+R+++H+
Sbjct: 615 KLADRKKITLATQPITLRTFQSHGRTHVFAASDRPTVIFVKSGQLLYSNVNVREISHVSP 674
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553
N+ +LA A+D GTI+ +QKLHI+T+ LGE PRRIAY + S TFGV+T
Sbjct: 675 FNSHMAEGALAFASDGALKIGTIETVQKLHIKTIKLGETPRRIAYHDVSHTFGVLT 730
Score = 169 bits (429), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 136/215 (63%), Gaps = 2/215 (0%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
++ L ++D +E+L + +L P E A SLI+ +F +D Y+ +GT P E+EP +G
Sbjct: 743 DISCLRLLDGQGYEVLDSIELQPFEIASSLITIRFTDDDTLYYTVGTGFAFPHEDEPVRG 802
Query: 1063 RIIIFHYDDGKLQQIA-EKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKEL-RLECS 1120
RI++F +D +L Q+ E +I+G+ YS +G+L+A +NS V + W ++ L L+
Sbjct: 803 RILVFKVNDMRLLQLVHEYDIRGSAYSFVSVHGRLVAGVNSNVMVLRWNSDTSLLELQSM 862
Query: 1121 HFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDEL 1180
+ +++AL L V+GDFILV DL++S+TLLQ+ S +E++ D + NWMT+ E++DD+
Sbjct: 863 NHGHVLALSLAVRGDFILVADLIKSITLLQFDLATDSLKELAYDADSNWMTAAELIDDDT 922
Query: 1181 FLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVH 1215
FLGA++S N+F K S+E+R L+ G H
Sbjct: 923 FLGADSSMNIFALSKQGDQVSEEERQRLRPKGWFH 957
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 162/307 (52%), Gaps = 20/307 (6%)
Query: 684 TQRTDLNLVVAKNNR----IEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFI 739
T +D+NL+V + I+ + + LR + ++ +YG+IA + FR DL+F+
Sbjct: 22 TSASDINLIVRMTDEFSTNIDSNPTVRKSLRLITDVPIYGRIACIHAFRPEHRDTDLIFV 81
Query: 740 ITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGL 799
T+R + ++L D ++ +A G+ +D + ++ G I ++DP+ R+IGL ++ G
Sbjct: 82 STERGSVIVLSF--DQQTQRLVPEATGDFNDPSSRLADPGQIGLVDPQNRMIGLHIHQGN 139
Query: 800 FKIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVN-GRHVKTHEISLK 858
FKIIP+ L + ++ + + + + +PT+ +H D R+V +E+ +K
Sbjct: 140 FKIIPMFHSQISLSSWNLLVNSSQSIKGKGVARPPHPTLAVLHMDSKESRYVTQYEVVIK 199
Query: 859 EKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTI 918
EK +E +SL+IPVP GG +++G++SI HS + IK++ I
Sbjct: 200 EKALVLKS-AATKVENGSSLLIPVPLAAGGVLVVGEQSIALHSPSLQKPIMLS-IKATLI 257
Query: 919 VCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSS 978
C+ +VD G RYLLGD G+L++L + + + +E K+ +G+ V+ SS
Sbjct: 258 KCFNQVDV-GFRYLLGDYEGQLYILAI-----IFANGTARELKMTPVGQ-----TVQASS 306
Query: 979 LSYIKPG 985
L+Y+ G
Sbjct: 307 LTYLTDG 313
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSG 57
+GS+RIIRNGIG+EE +D + + G+WAL S DN LVLSF+G TR+ L G
Sbjct: 377 DGSIRIIRNGIGVEEIGQLDDMEELTGVWALKPYSAARHDNVLVLSFIGETRLQKLDG 434
>gi|384500266|gb|EIE90757.1| hypothetical protein RO3G_15468 [Rhizopus delemar RA 99-880]
Length = 1057
Score = 338 bits (868), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 197/487 (40%), Positives = 282/487 (57%), Gaps = 27/487 (5%)
Query: 74 LWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVV 133
+ N R LLGD G L++L L + V+ LG ISIP CL YLDN +V
Sbjct: 240 IMNEEGSRVLLGDAEGLLYLLALNTTNQ-----CVESLSFIYLGSISIPSCLAYLDNDIV 294
Query: 134 FVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGF 193
FVGS L DSQLV + R+ E+ + ++E+F NL PI D V D + GQ Q++TCSG
Sbjct: 295 FVGSNLADSQLVYIQRTTGESEDILQIIETFANLGPITDFCVAD--KGGQTQVITCSGAG 352
Query: 194 KEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 253
KEGSLRIIRNG+G+ E A I + G+KGIWAL + L++SFV TR+L L
Sbjct: 353 KEGSLRIIRNGVGLNELAMIPISGVKGIWAL------GEYDLLLMSFVHQTRLLQLQKDH 406
Query: 254 --VEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISV 311
V+ + +T G V ++QVT + L+ T S V W + + I+V
Sbjct: 407 TIVQLDTFSAIDLNARTLVAGCVVDGMIIQVTDHSVRLMDTMSLLDV--WS--SDELITV 462
Query: 312 VSCNKNQVLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQ 370
S N Q + + G + L+V ++ + L +E++C+DI P+ + S+
Sbjct: 463 ASVNPTQCVISLGFGKLVALQVLNRKLNVIGETRLSFEISCIDIHPIGSRTESA------ 516
Query: 371 LAAVGLW-TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFY 429
A+G W ++ + LLSL L+ + ++ LGG ++PRSIL++ FE YLLVALGDG +
Sbjct: 517 FVALGTWNSNTNVCLLSLSDLQPIAQKSLGGTVVPRSILISQFENTVYLLVALGDGQFYN 576
Query: 430 FSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL 489
F LD SG+L+DKK+ LG P L F T+VFA SD+P+V++S N KLV+SNVNL
Sbjct: 577 FKLDSISGQLSDKKRTFLGKLPIHLSNFSLNGVTHVFAASDKPSVVHSRNQKLVYSNVNL 636
Query: 490 RQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTF 549
++V S ++PD++AL T G ++EIQKLHI +P + PRRI YQES+++F
Sbjct: 637 KEVRCATSFGCHAFPDAVALITKEGLIIGQMEEIQKLHITKIPTIDTPRRIVYQESTKSF 696
Query: 550 GVITTRI 556
G+IT R+
Sbjct: 697 GIITERM 703
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFH 1068
++D +F +L E LS+ S F +DPN Y+++ + +EN+ GRI++
Sbjct: 719 VLDDQSFTVLDRIYFKEFERPLSVTSVLFEDDPNEYYIVASG----KEND-GLGRILVLQ 773
Query: 1069 Y-DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIA 1127
D KL+ I++ + G + GKLLASI T+ L+ W +++ +++ ++
Sbjct: 774 LASDRKLRLISQLKTGGMIDCVRPIEGKLLASIQGTLYLYRWQSQRLVKVSSRRLPSVTR 833
Query: 1128 LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENS 1187
+ +FI+ GDL S+ + QY E++ + +++ +D L +GAE
Sbjct: 834 C-MTTHENFIMTGDLAYSVVMFQYDRQSDQLLEVAAHEKTKEVLAMKAIDSNLVIGAERE 892
Query: 1188 YNLFI---CQKDSAATSDEDRTHLQEVGTVHLVGDGLVQCR 1225
+LF+ CQ + +A D L + T HL GD + + R
Sbjct: 893 GHLFVLEHCQDEVSA----DEPLLDVISTWHL-GDVVSRFR 928
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 26/263 (9%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T ++NL++ K RIE++T+TP+GL+P E G+ R T + R
Sbjct: 25 TSSEEINLILGKGTRIEVYTLTPDGLKPTIEFKGSGEFTFPGQPRNETTNVITALDPSWR 84
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y A L V+ I + S++ + P R + LR G K
Sbjct: 85 YLAATL--------------YESTVTLLIPEASQHPTV----PIQRKVSLRHKEG--KRR 124
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
P E N +I + + ++ + FL +PT++ +++D + + ++K+++
Sbjct: 125 PQEY-NHPQDHINISLPDKKVISLAFLQDTLDPTLLILYEDALEQRL-LQMFTIKDRQLV 182
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILY-HSGKSYVAVAPQIIKSSTIVCYA 922
D+ E +ASL+I +P +GG +++ + I Y + +A+ I+SSTI +
Sbjct: 183 PGDIILDHFESDASLLIAMPPAVGGVLLVASKFIRYLKPNQPPIAIG---IRSSTINSHC 239
Query: 923 KVDANGERYLLGDLAGRLFMLLL 945
++ G R LLGD G L++L L
Sbjct: 240 IMNEEGSRVLLGDAEGLLYLLAL 262
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 6/55 (10%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLRIIRNG+G+ E A I + G+KGIWAL + L++SFV TR+L L
Sbjct: 354 EGSLRIIRNGVGLNELAMIPISGVKGIWAL------GEYDLLLMSFVHQTRLLQL 402
Score = 44.3 bits (103), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 619 QNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKE 657
Q + + +FTSS ++NL++ K RIE++T+TP+GL+P E
Sbjct: 17 QFSVKGSFTSSEEINLILGKGTRIEVYTLTPDGLKPTIE 55
>gi|390366809|ref|XP_780126.3| PREDICTED: DNA damage-binding protein 1-like isoform 1
[Strongylocentrotus purpuratus]
Length = 630
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 154/216 (71%), Positives = 182/216 (84%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
EVEVH+LL+IDQ+TFE+LHAH EYA SLIS K DPN Y+++G A VHP+E EPK
Sbjct: 276 EVEVHSLLVIDQHTFEVLHAHHFGSSEYATSLISCKLCNDPNWYYIVGLANVHPDEAEPK 335
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECS 1120
GRI++F Y DGKLQ+IAEKEIKGA YS+ EFNGKLLAS+NS VRLFEWT E LR+ECS
Sbjct: 336 SGRIVVFQYSDGKLQEIAEKEIKGAPYSLVEFNGKLLASVNSVVRLFEWTPEHSLRVECS 395
Query: 1121 HFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDEL 1180
H+NN++AL+LK KGDFI+VGDLMRS+TLL YK MEG EEI+RDY+PNWM+++EILDD+
Sbjct: 396 HYNNVLALYLKTKGDFIVVGDLMRSITLLAYKPMEGCLEEIARDYSPNWMSAVEILDDDT 455
Query: 1181 FLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
FLGAENS NLF CQKDSAAT+DE+R HLQEVG HL
Sbjct: 456 FLGAENSSNLFTCQKDSAATTDEERRHLQEVGLFHL 491
Score = 279 bits (713), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 143/227 (62%), Positives = 174/227 (76%), Gaps = 9/227 (3%)
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
EIIPRSIL+T FEG Y+L ALGDGS+FYF L+ +G +TD+KKV LGTQPTVLKTF+SL
Sbjct: 70 EIIPRSILLTTFEGQNYILCALGDGSLFYFQLNAETGYMTDRKKVILGTQPTVLKTFKSL 129
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTI 520
ST NVFACSDRPTVIYSSNHKLVFSNVNL++V++MC LN++ YPDSLAL D+T G+I
Sbjct: 130 STVNVFACSDRPTVIYSSNHKLVFSNVNLKEVSYMCPLNSDGYPDSLALCNDTTLMIGSI 189
Query: 521 DEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTP----VRPSASTQAQ 576
DEIQKLHIRTVPLGE P RI YQE SQTFG+I+TR D+ ++ G+T R SAST A
Sbjct: 190 DEIQKLHIRTVPLGETPLRITYQEPSQTFGIISTRTDVVDSSGTTASMGQTRQSASTSAL 249
Query: 577 NTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFE 623
N T S + K + + + + + F EVEVH+LL+IDQ+TFE
Sbjct: 250 NITKSGGN-----KGMAGQAGGSGEGSSFGDEVEVHSLLVIDQHTFE 291
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/67 (80%), Positives = 63/67 (94%)
Query: 439 LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSL 498
+TD+KKV LGTQPTVLKTF+SLST NVFACSDRPTVIYSSNHKLVFSNVNL++V++MC L
Sbjct: 1 MTDRKKVILGTQPTVLKTFKSLSTVNVFACSDRPTVIYSSNHKLVFSNVNLKEVSYMCPL 60
Query: 499 NAESYPD 505
N++ YPD
Sbjct: 61 NSDGYPD 67
>gi|74212634|dbj|BAE31055.1| unnamed protein product [Mus musculus]
Length = 261
Score = 337 bits (863), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 157/238 (65%), Positives = 197/238 (82%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T +
Sbjct: 24 TSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
YNA ILE + ++++I+T+AHGNV DRIG+PSE GII IIDPE R+IGLRLY+GLFK+I
Sbjct: 84 YNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVI 143
Query: 804 PLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
PL++DN ELKA +IR+EEL + DV+FL+GCQ PTI ++QD GRHVKT+E+SL+EKEF
Sbjct: 144 PLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFN 203
Query: 864 KTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCY 921
K PWKQ+N+E EAS+VI VPEP GGAIIIGQESI YH+G Y+A+AP IIK STIVC+
Sbjct: 204 KGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCH 261
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FTS+ DLNL++AKN R+EI+ VT EGLRPVKE+ +YGKIAVM+ FR + KDLLFI+T
Sbjct: 22 HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILT 81
Query: 685 QRTDLNLVVAKNNRIEIHTVT 705
+ + ++ K + I +T
Sbjct: 82 AKYNACILEYKQSGESIDIIT 102
>gi|339235331|ref|XP_003379220.1| DNA damage-binding protein 1 [Trichinella spiralis]
gi|316978142|gb|EFV61158.1| DNA damage-binding protein 1 [Trichinella spiralis]
Length = 1329
Score = 323 bits (827), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 195/557 (35%), Positives = 308/557 (55%), Gaps = 25/557 (4%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDN-GVVFVGSRLG 140
Y LG L G L +L L+ E +G ++ + +LG S P+ L+Y+ ++FVGSR+
Sbjct: 434 YFLGQLDGTLSLLKLDIETDAEGKVTLSRMRATILGVTSPPDSLSYMHKESLLFVGSRIA 493
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DS+L++LN + T+ V ESF NLAPI+DMV+VD+ +QGQG++++CSG K+GSL++
Sbjct: 494 DSKLLRLNSLAICDETWTEV-ESFPNLAPIVDMVLVDMAKQGQGEIISCSGYGKDGSLKV 552
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGH-TRVLTLSGAEVEETEM 259
IR+GIG+ E A +D+P + +WAL + + DN +L VG+ T V+ + E+ +
Sbjct: 553 IRSGIGLYELARLDIPFVNRVWALRYITNEPYDNLFILGVVGNSTMVIKFQENQAEQISV 612
Query: 260 GGFTSDQQTFYCGNVD----PRTVLQVTPSAAILISTESKAR-VSSWEPPNGKSISVVSC 314
G + +QTF N ++QV S L R + W+ P+G +S+ +C
Sbjct: 613 DGLETAEQTFVAANCHMADGALAIVQVVRSKIQLADASLDGRKLDEWKFPDGSEVSLAAC 672
Query: 315 --NKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLA 372
++L A ++Y V ++ + R +E E +C++ LS+E +
Sbjct: 673 EGTSGRLLVACRHILHYFNVRDDRLQLVTTRTMENEASCVEFGCLSDEGVG-------VC 725
Query: 373 AVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSL 432
VG WT I +LL +PSLE V L + RS LM FE + YL V+L DG++ ++S+
Sbjct: 726 IVGHWTKICLQLLFVPSLEPVQTVYLEDSSVIRSALMCKFESNMYLFVSLADGNLIFYSI 785
Query: 433 DPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQV 492
D S L D KKV+LGT LK F++ +T ++ AC+++PTVIY +N+KL FS+++ +
Sbjct: 786 DENSFALIDGKKVSLGTDSISLKMFKTKNTLSILACTEKPTVIYMNNNKLQFSSLDSSAI 845
Query: 493 NHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
+M L +Y + + T G +DEI+KLHIR+V LGE PRRI +Q ++ GV+
Sbjct: 846 YYMTPLFTSAYDNGVLFTNGQCLTIGVVDEIKKLHIRSVVLGETPRRIVWQPENKLVGVL 905
Query: 553 TTRI------DIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFN 606
T RI E+ S SAS T+ T+ S I G+ + D
Sbjct: 906 TIRIMDLPGNSSSESSASNRALHSASAPPLRRTTLTVDPNSAINEGAVNIGAEDTGVD-- 963
Query: 607 MEVEVHNLLIIDQNTFE 623
+E H+ L++DQN+F+
Sbjct: 964 RSIETHSFLLLDQNSFD 980
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/222 (41%), Positives = 145/222 (65%), Gaps = 9/222 (4%)
Query: 1002 VEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ 1061
+E H+ L++DQN+F++LHA+ + P E S++S GED N +F+L AV+ +E EP Q
Sbjct: 966 IETHSFLLLDQNSFDVLHAYSMNPLEECTSILSCTMGEDQNPFFILSAAVITADETEPLQ 1025
Query: 1062 GRIIIFHYD-DGK----LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR 1116
GR+++ Y+ DG+ L + EKE+ G Y+M F KLL ++NS+V LFEW++ L+
Sbjct: 1026 GRLLMLRYERDGQGNSSLNLVHEKEVNGCVYAMASFKSKLLVAMNSSVLLFEWSDVTGLQ 1085
Query: 1117 L--ECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIE 1174
L CS F + A+ LKV+ + ILVGD+ RS+ +L+Y E SF E +RDY+PNW+++IE
Sbjct: 1086 LVSSCSLF--VTAMHLKVRDEVILVGDIQRSIAVLRYVPSESSFVEEARDYHPNWISAIE 1143
Query: 1175 ILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
++D++ F+ AENS N+ + QKD + ++ G +HL
Sbjct: 1144 VIDNDYFMAAENSLNITVSQKDLQQQPVSESQVVKSAGRLHL 1185
Score = 182 bits (462), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 154/278 (55%), Gaps = 6/278 (2%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+L++ KN+R E+H+V+ EGL+ V E ++G+I K F + K L+ I+T + + I+
Sbjct: 197 DLIIFKNSRFEVHSVSAEGLQYVTEGKMFGRIGAAKLFTPKGENKALMVIVTLKQDVAIV 256
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
E DN I T A N+S+ G+P+ NGI+ + P+ VIGLR+ + FK I +
Sbjct: 257 E----YDNGRIKTLASRNISENFGRPASNGILLSVHPDGEVIGLRIMSSTFKCITWNRAT 312
Query: 810 FELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTPWKQ 869
+L S+ + D FLHG Q P I I+ D+ GRHV T ISL E+EF PW +
Sbjct: 313 SKLSTYSLNYSLTHLSDFVFLHGFQFPVIALIYGDLVGRHVITCRISLDEQEFENGPWSR 372
Query: 870 DNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVA-VAPQIIKSSTIVCYAKVDANG 928
+IE EA +I VP PL G I++G S+LY S ++ V+P + S + CY +G
Sbjct: 373 GHIEWEAHTLIAVPPPLCGVIVVGCSSLLYIRDNSTISTVSPPFLSKSIVNCY-DAAPDG 431
Query: 929 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLG 966
Y LG L G L +L L+ E +G ++ + +LG
Sbjct: 432 LTYFLGQLDGTLSLLKLDIETDAEGKVTLSRMRATILG 469
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%)
Query: 620 NTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDL 679
++ +FT+ +L++ KN+R E+H+V+ EGL+ V E ++G+I K F + K L
Sbjct: 184 HSLHGSFTAPGSSDLIIFKNSRFEVHSVSAEGLQYVTEGKMFGRIGAAKLFTPKGENKAL 243
Query: 680 LFIITQRTDLNLVVAKNNRIE 700
+ I+T + D+ +V N RI+
Sbjct: 244 MVIVTLKQDVAIVEYDNGRIK 264
Score = 46.6 bits (109), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 53
+GSL++IR+GIG+ E A +D+P + +WAL + + DN +L VG++ ++
Sbjct: 547 DGSLKVIRSGIGLYELARLDIPFVNRVWALRYITNEPYDNLFILGVVGNSTMV 599
>gi|413948669|gb|AFW81318.1| hypothetical protein ZEAMMB73_456332 [Zea mays]
Length = 674
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/325 (50%), Positives = 225/325 (69%), Gaps = 9/325 (2%)
Query: 236 LVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTES 294
LV+SF+ TR L ++ E+EETE+ GF + QT +C N ++QVT ++ L+S S
Sbjct: 3 LVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTS 62
Query: 295 KARVSSWEPPNGKSISVVSCNKNQVLCATGC-DVYYLEVHGSEIKQLAHRALEYEVACLD 353
+ V W P G S++V S N +QVL ATG + YLE+ +++ ++ H LE+E++CLD
Sbjct: 63 RELVDQWNAPAGFSVNVASANASQVLLATGGGHLVYLEIRDAKLVEVKHAQLEHEISCLD 122
Query: 354 ISPLSNE-ETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF 412
++P+ E SS LAAVG+WTDIS R+ SLP L + KE LGGEI+PRS+L+
Sbjct: 123 LNPIGEHLEYSS------LAAVGMWTDISVRIFSLPDLVLIRKENLGGEIVPRSVLLCTL 176
Query: 413 EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRP 472
EG YLL ALGDG++F F L+ ++G LTD+KKVTLGTQP L+TF S TT+VFA SDRP
Sbjct: 177 EGVSYLLCALGDGNLFSFLLNASTGELTDRKKVTLGTQPISLRTFSSKGTTHVFASSDRP 236
Query: 473 TVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVP 532
TVIYSSN KL++SNVNL++VNHMC N ++PDSLA+A + + GTID+IQKLHIRT+P
Sbjct: 237 TVIYSSNKKLLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIP 296
Query: 533 LGEAPRRIAYQESSQTFGVITTRID 557
L E RRI +QE S+T + + +
Sbjct: 297 LNEQARRICHQEQSKTLAFCSFKYN 321
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 155/220 (70%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E E H + ++D TFE L + L E S+IS F +D N Y+ +GTA V PEENEP
Sbjct: 326 ESETHLIRLLDHQTFESLCVYPLDQYECGCSIISCSFVDDNNVYYCVGTAYVIPEENEPT 385
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK----ELR 1116
+GRI++F +DG LQ I EKE KGA YS+ FNGKLLA+IN ++L++W + + EL+
Sbjct: 386 KGRILVFAVEDGSLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMSREDGSHELQ 445
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+AL+ + +GDFI+VGDLM+S++LL YK E + EE +RDYN NWMT++E+L
Sbjct: 446 SECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEESAIEERARDYNANWMTAVEML 505
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DDE+++GAEN YNLF +K+S A +D++R L+ VG HL
Sbjct: 506 DDEVYVGAENGYNLFTVRKNSDAATDDERAKLEVVGEYHL 545
>gi|221044336|dbj|BAH13845.1| unnamed protein product [Homo sapiens]
Length = 222
Score = 295 bits (756), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 168/209 (80%), Gaps = 1/209 (0%)
Query: 87 LAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVK 146
+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE SI ECLTYLDNGVVFVGSRLGDSQLVK
Sbjct: 1 MEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVK 60
Query: 147 LNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIG 206
LN +E G+YV ME+FTNL PI+DM VVDLERQGQGQLVTCSG FKEGSLRIIRNGIG
Sbjct: 61 LNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIG 120
Query: 207 IEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQ 266
I EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G EVEETE+ GF DQ
Sbjct: 121 IHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQ 180
Query: 267 QTFYCGNVDPRTVLQVTPSAAILISTESK 295
QTF+CGNV + ++Q P + L+ E K
Sbjct: 181 QTFFCGNVAHQQLIQ-PPGSGRLVKPEGK 208
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 49/68 (72%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEW 60
EGSLRIIRNGIGI EHA IDLPGIKG+W L + D+TLVLSFVG TRVL L+G E
Sbjct: 109 EGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEV 168
Query: 61 GFHLLRGF 68
L GF
Sbjct: 169 EETELMGF 176
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 936 LAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
+ GRLFMLLLEKEE+MDGT ++K+ +VELLGE
Sbjct: 1 MEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE 32
>gi|166158025|ref|NP_001107422.1| damage-specific DNA binding protein 1, 127kDa [Xenopus (Silurana)
tropicalis]
gi|157422734|gb|AAI53474.1| Zgc:63840 protein [Danio rerio]
gi|163916541|gb|AAI57552.1| LOC100135265 protein [Xenopus (Silurana) tropicalis]
Length = 306
Score = 286 bits (732), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 129/166 (77%), Positives = 150/166 (90%)
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+V PEE EPKQGRII+FHY DGKLQ +AEKE+KGA YSM EFNGKLLASINSTVRL+EWT
Sbjct: 1 MVCPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT 60
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
EKELR EC+H+NNI+AL+LK KGDFILVGDLMRS+ LL YK MEGSFEEI+RD+NPNWM
Sbjct: 61 AEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGSFEEIARDFNPNWM 120
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+++EILDD+ FLGAEN++NLF+CQKDSAAT+DE+R HLQEVG HL
Sbjct: 121 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 166
>gi|402595041|gb|EJW88967.1| hypothetical protein WUBG_00126 [Wuchereria bancrofti]
Length = 621
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/367 (43%), Positives = 239/367 (65%), Gaps = 22/367 (5%)
Query: 80 ERYLLGDLAGRLFMLLLE----KEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFV 135
+RYLL DLAG L+MLLLE +E+ + V++ KVE LGE I EC+ YLDNGV F+
Sbjct: 268 QRYLLADLAGNLYMLLLELGKDQEQDENSAVIVRDMKVESLGETCIAECMCYLDNGVCFI 327
Query: 136 GSRLGDSQLVKLNRSPDENGT-YVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFK 194
GSR GDSQL++L+ P +GT Y+S+++S+TNLAPI DM V + GQ Q++TCSG +K
Sbjct: 328 GSRFGDSQLIRLSTEPRADGTGYISLLDSYTNLAPIRDMTV--MRCNGQQQILTCSGAYK 385
Query: 195 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEV 254
+G++RIIRNGIGIEE A ++L GIK ++ L + D+ L+LSF T VL ++G E+
Sbjct: 386 DGTIRIIRNGIGIEELASVELKGIKNMFTLRTRGDE-FDDYLILSFDSETHVLFINGEEL 444
Query: 255 EETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVS 313
E+TE+ GF D T + G + +T+LQVT ILI ++ + W+ P K I++++
Sbjct: 445 EDTEITGFAVDGATLWAGCLFHSKTILQVTHGEVILIDGDN---IQVWKSP--KWITLLN 499
Query: 314 CNK---NQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQ 370
++ Q++ A G + YLE + + K + E+E++C+DI+P+ SE
Sbjct: 500 YDERSTGQLVVACGALLIYLEANSAGFKVITQIECEFEISCIDITPIGKGTLRSE----- 554
Query: 371 LAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYF 430
+ AVG WTD+S L +LP L EV +E + G+++ RSI+++ EGH YLLVALGDG++ YF
Sbjct: 555 ICAVGYWTDLSVALRALPQLVEVVREKIAGDMLSRSIMLSPMEGHVYLLVALGDGTVHYF 614
Query: 431 SLDPASG 437
+D +G
Sbjct: 615 QIDMKTG 621
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 183/291 (62%), Gaps = 13/291 (4%)
Query: 687 TDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNA 746
T+LNLV+AK NR+E+ VTPEGL+P +E ++G+IA +K FR P + D L I+T +Y+
Sbjct: 27 TELNLVLAKTNRVELFLVTPEGLKPHRECPVFGRIATIKLFRAPGEDVDSLLILTAKYHL 86
Query: 747 MILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE 806
I+ E+ T+A G++ DR+G+PSE G+IA + ++ RLY+GL KI+
Sbjct: 87 AIIRW---TPTSELRTRASGHIVDRVGRPSETGMIATVHSSGLMV-FRLYDGLLKIVQWN 142
Query: 807 KDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTP 866
+ +L+ ++R ++L I D+ F+ PT+ I+QD NGRH+K +++ +KE +
Sbjct: 143 EGK-DLRGFNVRCDDLYIVDITFMSDPDRPTLAYIYQDDNGRHIKVVTLNIDDKELSSPL 201
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKS----YVAVAPQIIKSSTIVCYA 922
WK DN+E EA++VI VPEP+GG +I G ++I YH G Y V + ++ CYA
Sbjct: 202 WKHDNLEGEANIVISVPEPVGGCLIAGPDAISYHKGGDDALRYAGVPGSRLHNTHPNCYA 261
Query: 923 KVDANGERYLLGDLAGRLFMLLLE----KEEKMDGTFSVKEPKVELLGEHC 969
VD +G+RYLL DLAG L+MLLLE +E+ + V++ KVE LGE C
Sbjct: 262 PVDRDGQRYLLADLAGNLYMLLLELGKDQEQDENSAVIVRDMKVESLGETC 312
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+F T+LNLV+AK NR+E+ VTPEGL+P +E ++G+IA +K FR P + D L I+T
Sbjct: 22 SFIVPTELNLVLAKTNRVELFLVTPEGLKPHRECPVFGRIATIKLFRAPGEDVDSLLILT 81
Query: 685 QRTDLNLV 692
+ L ++
Sbjct: 82 AKYHLAII 89
>gi|449488592|ref|XP_004158102.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
[Cucumis sativus]
Length = 570
Score = 267 bits (682), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 208/301 (69%), Gaps = 11/301 (3%)
Query: 688 DLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
+LNL++AK RIEIH +T +GL+P+ ++ +YG+IA ++ FR + +D LFI T+RY
Sbjct: 29 ELNLIIAKCTRIEIHLLTAQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFC 88
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
+L+ D ++ E++T+A G+VSDRIG+P+++G I IIDP+ R+IGL LY+GLFK+IP +
Sbjct: 89 VLQ--WDTESSELITRAMGDVSDRIGRPTDSGQIGIIDPDCRLIGLHLYDGLFKVIPFDN 146
Query: 808 DNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVKTHEISLKEKEFTKTP 866
+A +IR+EEL++ D++FL+GC PTI+ ++QD + RHVKT+E+ LK+K+F + P
Sbjct: 147 KGQLKEAFNIRLEELQVLDIKFLYGCSRPTIVVLYQDNKDARHVKTYEVVLKDKDFVEGP 206
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDA 926
W Q+N++ A+++IPVP PL G IIIG+E+I+Y S ++ A+ ++ S Y +VDA
Sbjct: 207 WSQNNLDNGAAVLIPVPPPLCGVIIIGEETIVYCSATAFKAIP---VRPSITRAYGRVDA 263
Query: 927 NGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPGS 986
+G RYLLGD AG L +L++ E++ V K+ELLGE + +++ GS
Sbjct: 264 DGSRYLLGDHAGLLHLLVITHEKE-----RVTGLKIELLGETSIASTISYLDNAFVYIGS 318
Query: 987 T 987
+
Sbjct: 319 S 319
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/241 (48%), Positives = 163/241 (67%), Gaps = 6/241 (2%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD AG L +L++ E++ V K+ELLGE SI ++YLDN V++GS G
Sbjct: 267 RYLLGDHAGLLHLLVITHEKE-----RVTGLKIELLGETSIASTISYLDNAFVYIGSSYG 321
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQLVKLN PD G+YV V+E + NL PI+D VVDLERQGQGQ+VTCSG +K+GSLR+
Sbjct: 322 DSQLVKLNVQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRV 381
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETEM 259
+RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++ E+EETE+
Sbjct: 382 VRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEI 441
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF S QT +C + ++QVT S+ L+S+ ++ ++ W P+ SI+V + N +Q
Sbjct: 442 EGFNSQVQTLFCHDALFNQLVQVTSSSVRLVSSTTRELLNEWNAPSNYSINVATANASQC 501
Query: 320 L 320
+
Sbjct: 502 I 502
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR++RNGIGI E A ++L GIKG+W+L + D LV+SF+ TR+L ++
Sbjct: 376 DGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
>gi|167517245|ref|XP_001742963.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778062|gb|EDQ91677.1| predicted protein [Monosiga brevicollis MX1]
Length = 1670
Score = 266 bits (681), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 246/492 (50%), Gaps = 29/492 (5%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R L+GD G L +L+LE + T V++ LG IS P + YLDNGVV++GS
Sbjct: 308 RILIGDELGDLHLLVLEGIAERRVTSIVRQH----LGRISTPSAIVYLDNGVVYIGSDQA 363
Query: 141 DSQLVKL-NRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
D QL++L + E V V++ + N+ PI+D +VDL+ GQ Q+V+C G ++G LR
Sbjct: 364 DCQLIQLLSHVQAEADNKVKVLQEYPNIGPIVDFEMVDLDGHGQQQVVSCCGSNQDGCLR 423
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLD--NTLVLSFVGHTRVLTLSGAEV--- 254
I+R G+GI+ A +DL G++ +W L S D + L L F+ T L+L+G EV
Sbjct: 424 ILRKGVGIDVLASLDLEGLQDLWCLRSASNLGEDQHDVLALKFLEQTAFLSLAGDEVCLL 483
Query: 255 ------------EETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWE 302
+ ++ G ++ +CGNV L VT A L+ + V+ W
Sbjct: 484 YSTPTSHSYTELDGVDVAGANTELPALHCGNVRDGMWLVVTSQDARLLDAVDRTEVTRWS 543
Query: 303 PPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSE-IKQLAHRALEYEVACLDISPLSNEE 361
PPNGK I V + + + A+G D+Y L + +E + + + L++E+ACL I
Sbjct: 544 PPNGKGIDVCASTGDLLAVASGSDLYALSLSRTEGLHDMKNATLDHEIACLSI------R 597
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVA 421
S A GLWTD S R S +LEE K + +++ S+ EG CY +
Sbjct: 598 ASGPDQGAGTILAGLWTDFSLRAFSTRTLEEQAKVEVPTQVVSSSVASVTMEGTCYFFIG 657
Query: 422 LGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHK 481
GDG + Y DP S V +G+ P L+ + VF +DRP V+ S K
Sbjct: 658 HGDGKLAYGVFDPLSSTFGAPHVVQVGSLPVKLRACKRGKDEFVFVATDRPMVVSSRRGK 717
Query: 482 LVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIA 541
L+F NV+ LNAE+Y D LA FG ++ +Q L IR +PL E P +
Sbjct: 718 LLFCNVSAGACRTADVLNAEAYVDCLAYVEQDRLVFGKMENMQNLQIRKIPLDETPLGVT 777
Query: 542 YQESSQTFGVIT 553
Y +SS F V T
Sbjct: 778 YHKSSGAFCVAT 789
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 17/270 (6%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
T +LNL++ K++ +E++ V EGL PV + LYG + M R P ++D +F++T
Sbjct: 66 FTAPDELNLLILKHSHLEVYKVVEEGLEPVMDKDLYGSVLAMNVIRLPGWERDAVFLLTS 125
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
+ IL D DN ++T GN +P++ G+ + P+ I + +Y G I
Sbjct: 126 TFRFFILA--SDEDN-GVVTVIKGNALSSCQRPADCGVHVAVHPKGNCIFVSVYPGNALI 182
Query: 803 IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIH-QDVNGRHVKTHEISLKEKE 861
IP + ++A S+ + + D F++G + T+ + D N +K + ++E+
Sbjct: 183 IPFDASGEPMEAYSVFVPVSSLLDATFVNGAHDFTLALLSDDDTNFTSLKMFHLDVEERT 242
Query: 862 FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTI--- 918
+ I +S ++P+ G +++G+E L H V P I SS +
Sbjct: 243 LVEEQLADSTINTYSSRLLPLWNLDSGVLVLGEE--LCH------VVTPSGIISSNLSES 294
Query: 919 --VCYAKVDANGERYLLGDLAGRLFMLLLE 946
V +D +G R L+GD G L +L+LE
Sbjct: 295 LPVAAGIIDTDGSRILIGDELGDLHLLVLE 324
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 11/224 (4%)
Query: 1007 LLIIDQNTFEILHAHQLFPGE--YALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRI 1064
L +ID +FE+ + +L E + SL + + D Y V+GTA+ P PKQGRI
Sbjct: 805 LRLIDAQSFEVRDSFKLEQAESLFGHSLHTMQLRNDSTEYIVVGTAMHDPNRPLPKQGRI 864
Query: 1065 IIFHY-DDGKLQQIAEKEIK-GACYSMCEFNGKLLASINSTVRLFEW-TNEKELRLECSH 1121
++ DDGKL+ + I G +S+ F ++A IN + F + E ++E +
Sbjct: 865 LVLRVNDDGKLELVVSHAIHDGGIFSLQAFRDGVVAGINGRLEYFSLESTPLERKVEVAS 924
Query: 1122 ---FNNIIAL-FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILD 1177
F + + L V G+ +LVGD+++S+T + Y F D ++ + +
Sbjct: 925 QTVFRGMQTVSCLGVCGNTVLVGDILQSVTAVNYSEQRNRFVVGPGDPESRYLLTCFLPA 984
Query: 1178 DELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGL 1221
++ FL ++ NL + T + D + + G +H +GD +
Sbjct: 985 EDRFLFCDSDQNLVLGMP-PVDTVENDASLMHLAGRIH-IGDNI 1026
Score = 45.4 bits (106), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLD--NTLVLSFVGHTRVLTLSGA 58
+G LRI+R G+GI+ A +DL G++ +W L S D + L L F+ T L+L+G
Sbjct: 419 DGCLRILRKGVGIDVLASLDLEGLQDLWCLRSASNLGEDQHDVLALKFLEQTAFLSLAGD 478
Query: 59 E 59
E
Sbjct: 479 E 479
>gi|449519304|ref|XP_004166675.1| PREDICTED: DNA damage-binding protein 1a-like [Cucumis sativus]
Length = 596
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/244 (53%), Positives = 173/244 (70%), Gaps = 10/244 (4%)
Query: 319 VLCATGCDVY-YLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
VL ATG V +LE+ + + H LE+E++CLDI+P+ + P +QLAAVG+W
Sbjct: 4 VLLATGGGVLVHLEICDGLLVEKKHIQLEHEISCLDINPIGDN-----PNCSQLAAVGMW 58
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TDIS R+ SLP L + KE LGGEIIPRS+L+ FEG C+ L ALGDG + F L+ S
Sbjct: 59 TDISVRIFSLPDLNLLTKEQLGGEIIPRSVLLCTFEGVCFCLCALGDGHLLNFILNTNSN 118
Query: 438 ----RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVN 493
L D+KKV+LGTQP L+TF S + T+VFA SDRPTVIYSSN KL++SNVNL++V+
Sbjct: 119 SNSCELMDRKKVSLGTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKLLYSNVNLKEVS 178
Query: 494 HMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553
HMC N+ ++PDSLA+A + T GTID+IQKLHIR++PLGE RRI +QE S+TF + +
Sbjct: 179 HMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICS 238
Query: 554 TRID 557
R +
Sbjct: 239 LRYN 242
Score = 239 bits (609), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
+ E+H + ++D TFE + + L EY S++S F +D N Y+ +GTA V PEENEP
Sbjct: 248 DTEMHFIRLLDDQTFESISTYALDTYEYGCSILSCSFSDDNNVYYCVGTAYVMPEENEPT 307
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELR 1116
+GRI++F ++GKLQ IAEKE KG+ YS+ FNGKLLA+IN ++L++WT +EL+
Sbjct: 308 KGRILVFVVEEGKLQLIAEKETKGSVYSLNAFNGKLLAAINQKIQLYKWTLRDDGTRELQ 367
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+AL+++ +GDFI+VGDLM+S++LL YK EG+ EE +RDYN NWM+++EIL
Sbjct: 368 SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 427
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DD+++LGAEN +NLF +K+S +DE+R+ L+ VG HL
Sbjct: 428 DDDIYLGAENYFNLFTVRKNSEGATDEERSRLEVVGEYHL 467
>gi|312076590|ref|XP_003140929.1| CPSF A subunit region family protein [Loa loa]
Length = 655
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/308 (45%), Positives = 189/308 (61%), Gaps = 17/308 (5%)
Query: 318 QVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
Q++ A G + YLE + K ++ E+E++C+DI+P+ NE SE + AVG W
Sbjct: 7 QLVIACGALLIYLEADSAGFKLISELECEFEISCIDITPIGNETLRSE-----ICAVGYW 61
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
TD+S L +LP L EV +E + G+++ RSI+++ EGH YLLVALGDG++ YF +D +G
Sbjct: 62 TDLSVALRTLPQLMEVVREKIPGDMLSRSIMLSPMEGHVYLLVALGDGTVHYFQIDMKTG 121
Query: 438 RLTDKKKVTLGTQPTVLKTFRSL--STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHM 495
L D KK TLGTQP L+ FRS S N+F CSDRP VIYSSN KL+FSNVNLR V+ M
Sbjct: 122 ALLDPKKATLGTQPIHLRKFRSRCSSVHNIFVCSDRPAVIYSSNQKLLFSNVNLRMVSTM 181
Query: 496 CSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
L AE+YPD+L L ++ G ID+IQKLHIRTVPLGE+P RIAYQ + T V R
Sbjct: 182 TPLYAEAYPDALVLTDGNSLVIGRIDDIQKLHIRTVPLGESPSRIAYQPETNTIAVTVER 241
Query: 556 IDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLL 615
++ +A G AS A T+SS + P E+EV ++L
Sbjct: 242 LEFVDAMGKHHFGQCASKNAMETSSSR----------LSSMRREPTPECLAEEMEVSSIL 291
Query: 616 IIDQNTFE 623
++D NTFE
Sbjct: 292 LLDSNTFE 299
Score = 253 bits (647), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/257 (48%), Positives = 174/257 (67%), Gaps = 2/257 (0%)
Query: 962 VELLGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAH 1021
V+ +G+H G +++ + P E+EV ++L++D NTFEILH+H
Sbjct: 245 VDAMGKHHFGQCASKNAMETSSSRLSSMRREPTPECLAEEMEVSSILLLDSNTFEILHSH 304
Query: 1022 QLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDG--KLQQIAE 1079
+L E A+SL S + G D YFV+GTAV+ +E E K GRI++F +G +++ + E
Sbjct: 305 ELEGSEMAMSLASCQLGNDSQPYFVVGTAVIMSDETESKMGRIMMFQASEGPERMRLVYE 364
Query: 1080 KEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILV 1139
KEIKGA YS+ +GKL+ ++NS VRLFEWT +KELRLECS F+N+ AL+LK K D ILV
Sbjct: 365 KEIKGAAYSIQSMDGKLVVAVNSCVRLFEWTADKELRLECSDFDNVTALYLKTKNDLILV 424
Query: 1140 GDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAA 1199
GDLMRSL+LL YK++E +FE+++RD+ NWM++ EI+D + FLGAENSYNLF KDS
Sbjct: 425 GDLMRSLSLLSYKSVESTFEKVARDFMTNWMSACEIIDSDSFLGAENSYNLFTVVKDSFT 484
Query: 1200 TSDEDRTHLQEVGTVHL 1216
E+ T LQE+G +L
Sbjct: 485 VFKEEGTRLQELGLFYL 501
>gi|170589357|ref|XP_001899440.1| CPSF A subunit region family protein [Brugia malayi]
gi|158593653|gb|EDP32248.1| CPSF A subunit region family protein [Brugia malayi]
Length = 655
Score = 256 bits (655), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/257 (48%), Positives = 175/257 (68%), Gaps = 2/257 (0%)
Query: 962 VELLGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAH 1021
V+ +G+H G +++ + P E+EV ++L++D NTFEILH+H
Sbjct: 253 VDAMGKHHFGQCASKNAMETSSSRLSSMRREPTPECLAEEMEVSSVLLLDSNTFEILHSH 312
Query: 1022 QLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDG--KLQQIAE 1079
+L E A+SL S + G+D YFV+GTAV+ +E E K GRI++F +G +++ + E
Sbjct: 313 ELEGSEMAMSLASCQLGDDSQPYFVVGTAVIMSDETESKMGRIMMFQASEGPERMRLVYE 372
Query: 1080 KEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILV 1139
KEIKGA YS+ +GKL+ ++NS VRLFEWT +KELRLECS F+N+ AL+LK K D ILV
Sbjct: 373 KEIKGAAYSIQSMDGKLVVAVNSCVRLFEWTADKELRLECSDFDNVTALYLKTKNDLILV 432
Query: 1140 GDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAA 1199
GDLMRSL+LL YK+ME +FE+++RD+ NWM++ EI+D + FLGAENSYNLF KDS
Sbjct: 433 GDLMRSLSLLSYKSMESTFEKVARDFMTNWMSACEIIDSDNFLGAENSYNLFTVMKDSFT 492
Query: 1200 TSDEDRTHLQEVGTVHL 1216
E+ T LQE+G +L
Sbjct: 493 VFKEEGTRLQELGLFYL 509
Score = 250 bits (638), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 140/320 (43%), Positives = 189/320 (59%), Gaps = 26/320 (8%)
Query: 315 NKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAV 374
N Q++ A G + YLE + + K + E+E++C+DI+P+ SE + AV
Sbjct: 3 NLGQLVVACGALLIYLEANSAGFKVITEIECEFEISCIDITPIGKGTLRSE-----ICAV 57
Query: 375 GLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDP 434
G WTD+S L +LP L EV +E + G+++ RSI+++ EGH YLLVALGDG++ YF +D
Sbjct: 58 GYWTDLSVALRALPQLVEVVREKIVGDMLSRSIMLSPMEGHVYLLVALGDGTVHYFQIDM 117
Query: 435 ASGRLTDKKKVTLGTQPTVLKTFRSLSTT--NVFACSDRPTVIYSSNHKLVFSNVNLRQV 492
+G L D KK TLGTQP L+ FRS + N+F CSDRP VIYSSN KL+FSNVNLR V
Sbjct: 118 KTGALLDPKKATLGTQPIHLRKFRSRCSPVHNIFVCSDRPAVIYSSNQKLLFSNVNLRMV 177
Query: 493 NHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
+ M L AE+YPD+L L + G ID+IQKLHIRTVPLGE+P RIAYQ + T VI
Sbjct: 178 STMTPLYAEAYPDALVLTDGHSLVIGRIDDIQKLHIRTVPLGESPSRIAYQPETNTIAVI 237
Query: 553 TTRIDI---------QEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPA 603
R+++ +A G AS A T+SS + P
Sbjct: 238 VERLEVILFLFFYVFVDAMGKHHFGQCASKNAMETSSSR----------LSSMRREPTPE 287
Query: 604 DFNMEVEVHNLLIIDQNTFE 623
E+EV ++L++D NTFE
Sbjct: 288 CLAEEMEVSSVLLLDSNTFE 307
>gi|398391687|ref|XP_003849303.1| hypothetical protein MYCGRDRAFT_87400 [Zymoseptoria tritici IPO323]
gi|339469180|gb|EGP84279.1| hypothetical protein MYCGRDRAFT_87400 [Zymoseptoria tritici IPO323]
Length = 1143
Score = 249 bits (637), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 167/502 (33%), Positives = 264/502 (52%), Gaps = 47/502 (9%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+RY L D G+L++L++++ +G +S + +++LGE S L YLD G VFVGS
Sbjct: 299 QRYALADDYGKLYLLMIQQTS--NGEYSSHQ--IDILGETSRASTLVYLDEGRVFVGSHQ 354
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ-----------GQGQLVT 188
GDSQ++++ P + + V+++F N+API+D V+D+ + GQ ++VT
Sbjct: 355 GDSQIIQI--LPQK----IEVLQTFPNIAPILDFAVMDMGNRSSDAPVNEFSSGQARIVT 408
Query: 189 CSGGFKEGSLRIIRNGIGIEEHA---CIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTR 245
SG FK+GSLR +R+G+G+E+ +D P I ++AL + NTLV+SFV HTR
Sbjct: 409 GSGAFKDGSLRSVRSGVGLEDRGDLGSLDAP-ISSLFALRSRPAPAVVNTLVVSFVSHTR 467
Query: 246 VLTLSG-AEVEETEM-GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEP 303
V + +VEE E GF + T + GN+ V+Q+T S+ +L E W+
Sbjct: 468 VFVFTAEGDVEEQEQYRGFELGESTLHAGNLADGRVIQITNSSVVLADQEGDMVTDRWQS 527
Query: 304 PNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRAL--EYEVACLDISPLSNE 360
P+G SI+ VS N N +L + G + L+V GS IK A R + +V+C+ +SP
Sbjct: 528 PSGTSITAVSANGNNILVSLKGASLLVLDVSGSTIKVHAQREFGSDEQVSCIALSP---- 583
Query: 361 ETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGE---IIPRSILMT-CFEGH- 415
S P + G W D L L +L+ E + E +PRS+ + EG
Sbjct: 584 ---SIPTQ---CVAGFWKDGKVAFLDLETLKTQASETVTEEDSLAVPRSLTVAKILEGQP 637
Query: 416 CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSLSTTNVFACSDRPTV 474
L V L DG++ +S+ AS T +K + LGTQ R NVFA + P++
Sbjct: 638 ATLFVGLADGNVVTYSIQSASNPFTARKSIILGTQQANFAVLPRDNGLENVFATCEHPSL 697
Query: 475 IYSSNHKLVFSNVNLRQVNHMCSLNA-ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPL 533
IY S ++VFS V +CS ++ E Y +++A+A++ +DE + H++ + L
Sbjct: 698 IYGSEGRIVFSAVTAENATCICSFDSFEPYGNAIAIASNDELKIAVVDEERTTHVQDLFL 757
Query: 534 GEAPRRIAYQESSQTFGVITTR 555
+ RRIAY + FG+ R
Sbjct: 758 NQTVRRIAYSADMKAFGLGCIR 779
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 162/333 (48%), Gaps = 51/333 (15%)
Query: 690 NLVVAKNNRIEIHTVTPEG-------LRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
+L+VAK NR+EI + P+ L+ K LYGK ++ R T D LF+ T
Sbjct: 28 DLIVAKANRLEIWSSNPQFPDDPTLFLQHTKA--LYGKATLLHKLRPATSPTDHLFVGTD 85
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
RYN + L ++ L+ K++ +++++ + S+ G IDP +R + L Y G+ I
Sbjct: 86 RYNYLTLSWDAELKELKT-EKSYVDIAEKAARDSQTGDRVHIDPTSRFMTLECYEGVVNI 144
Query: 803 IPL-EKDNFELKAS-----------SIRMEELEIQDVQFLHGCQ------NPTIICIHQD 844
+P+ + KA+ +R+ EL ++ FLH Q P +++D
Sbjct: 145 LPIAHAGKGKRKAADDEIGELADPIQVRIPELFVRSTCFLHRRQAGAKHAKPAFALMYED 204
Query: 845 VNGR-HVKTHEI----SLKEKEFTKTPWKQD------NIEMEASLVIPVPEPLGGAIIIG 893
+ +K E+ SL+ E T + +E+ AS +IP+P P+ G +++G
Sbjct: 205 SQNKVRIKVRELEYGQSLRPSEEPSTADLDEGKEVSGQLELGASHLIPLPPPMYGMLVVG 264
Query: 894 QESILYHSGKSYVAVAPQIIKSSTI-VCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMD 952
+ SI Y + Q ++ +T+ V + ++D +RY L D G+L++L++++ +
Sbjct: 265 ETSISYVEEFEHQVKETQPLEEATVFVDWCQID--DQRYALADDYGKLYLLMIQQTS--N 320
Query: 953 GTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
G +S + +++LGE + S+L Y+ G
Sbjct: 321 GEYSSHQ--IDILGETSRA-----STLVYLDEG 346
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 114/213 (53%), Gaps = 12/213 (5%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPN---TYFVLGTAVVHPEENEPKQGRII 1065
++D+ F+ L ++QL E S+I K + FV+GTA + ++ +GRI+
Sbjct: 795 LVDEIAFKELDSYQLNEDELVESVIRCKLDDGSGGDAERFVIGTAYLDDQDASNAKGRIL 854
Query: 1066 IFHY-DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK----ELRLECS 1120
+ +D +L+ + E ++GAC + +G+++A++ TV ++ + E + + +
Sbjct: 855 VLEVTEDRRLKLVTEISVRGACRCLAVSHGRIVAALIKTVIIYSFEYETPSSPAMVKKAA 914
Query: 1121 HFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEISRDYNPNWMTSIEIL 1176
+ + + + V GD I V DLM+S++L+Q+ + + E++R ++ W T++ +
Sbjct: 915 YRTSTAPIDMCVTGDIIAVTDLMKSMSLVQHTLGQAGGPDNLTEVARHFDTLWGTAVANV 974
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
D+ ++L ++ NL + + D S+EDR L+
Sbjct: 975 DENIYLESDAEGNLVVLEHDVKGFSEEDRRRLR 1007
Score = 44.3 bits (103), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 1 EGSLRIIRNGIGIEEHA---CIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSG 57
+GSLR +R+G+G+E+ +D P I ++AL + NTLV+SFV HTRV +
Sbjct: 415 DGSLRSVRSGVGLEDRGDLGSLDAP-ISSLFALRSRPAPAVVNTLVVSFVSHTRVFVFTA 473
>gi|212539802|ref|XP_002150056.1| UV-damaged DNA binding protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210067355|gb|EEA21447.1| UV-damaged DNA binding protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 1139
Score = 245 bits (626), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/503 (31%), Positives = 268/503 (53%), Gaps = 44/503 (8%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRLF L+L +D V+ K++ LGE S L YL G+ F+GS
Sbjct: 296 QRWLLADDYGRLFFLML----VLDSQNEVEGWKLDYLGEASRASVLIYLGAGMTFIGSHQ 351
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ-----------GQGQLVT 188
GDSQ+++++ G++ ++++ +N+API+D ++DL + GQ ++VT
Sbjct: 352 GDSQVIRIS-----EGSF-EIIQTISNIAPILDFTIMDLGAREGENYTHEFSSGQARIVT 405
Query: 189 CSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 247
SG F +G+LR +R+G+G++E + ++ I +WAL I SP + +TLV++FV TRV
Sbjct: 406 GSGAFNDGTLRSVRSGVGMDELGVLGEMEHITDMWALQISSPGDFSDTLVVTFVNETRVF 465
Query: 248 TLSG-AEVEE-TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPN 305
S EVEE E G + T N+ ++ VT S + T+S S W P +
Sbjct: 466 RFSSDGEVEELDEFLGLNLAENTLLSSNLPGGRIIHVTESGVSIADTDSGMVTSKWSP-D 524
Query: 306 GKSISVVSCNKNQVLCATGCDVYY-LEVHGSEIKQLAHRAL--EYEVACLDISPLSNEET 362
G +I+ V+CN +++ TG + L++ G ++K L+ + + +V+ + I P
Sbjct: 525 GHTITSVACNDERLVVVTGGQIIATLDITG-DLKVLSQKDFGKDNQVSGVTIPP------ 577
Query: 363 SSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT--CFEGHCYL 418
A +Q+ + +L L EE+ + LG E PR++L+ + L
Sbjct: 578 ----APSQVCIAAFPQNALVAVLDLHRFEELHSQSLGVASEAFPRTVLLAEILADSSSTL 633
Query: 419 LVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYS 477
V++ DGS+ FS D S LT K+ LG+ QPT K R NVF + P++IY+
Sbjct: 634 FVSMADGSVVTFSYDAESHSLTGTNKLILGSEQPTFKKLPRGDGLYNVFTTCEHPSLIYA 693
Query: 478 SNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAP 537
S ++++S VN + +C N E+YPD++A+AT +D+ + I+T+P+G
Sbjct: 694 SEGRIIYSAVNSEGASRVCHFNTEAYPDAIAVATSRDLKIALVDKERTTQIQTLPIGATV 753
Query: 538 RRIAYQESSQTFGVITTRIDIQE 560
RR+AY + + FG+ T + +++
Sbjct: 754 RRVAYSPTEKAFGIGTIKRRLED 776
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 162/331 (48%), Gaps = 48/331 (14%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKK-DLLFIITQRYNAMIL 749
LVVAK R+E +++TP+GL LY K++++ P + D LF+ T + L
Sbjct: 29 LVVAKGARLEFYSITPDGLALTTSRALYAKVSMLARLPAPANSTTDHLFVGTDQNTYFTL 88
Query: 750 ECRGDIDNLEILT-KAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIP---L 805
+ D + + T +++ +++D+ + +NG +IDP + + L ++ G+ ++P L
Sbjct: 89 --KWDSEKRRVRTERSYVDLADKASRACQNGDRCLIDPSGKYMTLEIFEGIITVLPIIQL 146
Query: 806 EKDNFE---LKASS-------------------IRMEELEIQDVQFLH--GCQNPTIICI 841
K + LK S R++EL ++ FLH +P + +
Sbjct: 147 HKKRGKPPVLKTSHYSNPDEPTPQIGELGEPMMTRIDELMVRSSAFLHVESKAHPRLALL 206
Query: 842 HQDVNGRHVK--THEISLK---EKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQES 896
H+D N R VK E+S + E F +T + +++ AS +IPVP PLGG +++G+
Sbjct: 207 HED-NQRKVKLKIRELSFEASAEPVFQETEDFTEELDLGASHLIPVPAPLGGLLVLGETC 265
Query: 897 ILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFS 956
I Y ++ + +++ V + +VD G+R+LL D GRLF L+L +D
Sbjct: 266 IKYIDDAKNETISNPLDEATIFVAWVQVD--GQRWLLADDYGRLFFLML----VLDSQNE 319
Query: 957 VKEPKVELLGEHCKGPVVEMSSLSYIKPGST 987
V+ K++ LGE + V L Y+ G T
Sbjct: 320 VEGWKLDYLGEASRASV-----LIYLGAGMT 345
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 119/244 (48%), Gaps = 22/244 (9%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTY--------FVLGTAVV 1052
E+ ++ D+ F L + L P E S+I ++ + Y F++GTA +
Sbjct: 779 EIVESQFVLADEIMFRKLDSFDLKPDELVESVIRAQMVVGKDRYDEPIYKDRFIVGTAYL 838
Query: 1053 HPEENEPKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTN 1111
E E +GRI++F D KL E +KGAC ++ ++A++ TV +FE T
Sbjct: 839 DDETAESIRGRILLFEVDSNRKLSLFLEHPVKGACRALAMMGDYIVAALVKTVVIFEVTG 898
Query: 1112 EKE-----LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK-----TMEGSFEEI 1161
+ + L+ + + + + V I+V DLM+S+++++ TME +E+
Sbjct: 899 QPQTGKYSLQKAAVYRTSTAPVDIAVTDKTIVVADLMKSISIVESNKTDALTMEA--KEV 956
Query: 1162 SRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGL 1221
+R + W T++ + +L ++ NL + +++ ++EDR L EV + L+G+ +
Sbjct: 957 ARHFATVWTTAVADIGSNQWLVSDAEGNLIVLRRNVDGMTEEDRRRL-EVTSELLLGEMV 1015
Query: 1222 VQCR 1225
+ R
Sbjct: 1016 NRIR 1019
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+G+LR +R+G+G++E + ++ I +WAL I SP + +TLV++FV TRV S
Sbjct: 412 DGTLRSVRSGVGMDELGVLGEMEHITDMWALQISSPGDFSDTLVVTFVNETRVFRFS 468
>gi|296411833|ref|XP_002835634.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629420|emb|CAZ79791.1| unnamed protein product [Tuber melanosporum]
Length = 1053
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 274/509 (53%), Gaps = 51/509 (10%)
Query: 74 LWNGWS----ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLD 129
+W W ERY+LGD AG L ML L MD + ++L+G SIPE L +L+
Sbjct: 272 VWVTWEMLSPERYILGDEAGGLHMLTLSAG-LMDTKVGLH---LKLVGNASIPEILVHLN 327
Query: 130 NGVVFVGSRLGDSQLVKLNRSPDENGT--YVSVMESFTNLAPIIDMVVVDLE-------- 179
G++F+GS GDSQL++L +NG V V + N+ PI+D V+DL+
Sbjct: 328 QGLLFLGSHSGDSQLLQLY----QNGIKPMVRVQQVLRNIGPIVDFRVMDLDYSRSDEVM 383
Query: 180 RQ---GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNT 235
RQ G + ++ SGG +G LR IR+G+G+ + + ++ GI+G+W+L + D+
Sbjct: 384 RQYSPGHIRFLSASGGHTQGHLRTIRSGVGLYDLGFLGEMSGIRGLWSLRSIPGSSFDDV 443
Query: 236 LVLSFVGHTRVLTL-SGAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
LV+SF+ TR+ + E+EE E GF +Q+T +V LQVT +A L+
Sbjct: 444 LVVSFIEETRIFKFDNSGEIEELYEFMGFALNQRTILAHSVVGGRFLQVTATAVKLVDVR 503
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLD 353
S ++ P +I++ S N++ ++ A G + L + ++++ E E++CL+
Sbjct: 504 SNTLIAESYPDKSLTITIASANQDLLIYAMGPTLVLLNL-ARDLEEHIRTTFENEISCLN 562
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGE---IIPRSILMT 410
+ S P+ + AVG WT +LS+ S + +E L E PRS+L
Sbjct: 563 MP--------SSPST--ICAVGFWTVSLVLILSVQSFSILSQEILSQEDSAATPRSLLFA 612
Query: 411 CF--EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN---- 464
G LLVALGDGSMF F+L+ + L+++K + LG QP F+S+ N
Sbjct: 613 RLLENGPPTLLVALGDGSMFTFALNETTCGLSERKHIILGAQPI---RFQSIPGGNGGVT 669
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
VFA D P+VIY S+ ++V+++V + ++ S N+ S+PD++ +A++ +D ++
Sbjct: 670 VFATCDHPSVIYGSDGRIVYASVTADKPTYVTSFNSPSFPDAVVIASEDDLKLSVVDPVR 729
Query: 525 KLHIRTVPLGEAPRRIAYQESSQTFGVIT 553
+H++++P+G+ RRIAY + ++T
Sbjct: 730 TMHVQSLPVGDVVRRIAYSKEKNIIAIVT 758
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 128/277 (46%), Gaps = 27/277 (9%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+L+VAK + IE++ + G+ + +YG++ + FR D L I+ + N
Sbjct: 28 SLIVAKTSHIEVYKLDGPGIVLEDKFPIYGRVIALAAFRPVKSATDHLLIVIGKVNYQYF 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
D + T+ P + + DP ++G+ +Y G+F +IP + +
Sbjct: 88 TISWDPVAKKPKTEHMAVNFSEYNAPLSDSFQCLADPGKNMLGIHVYKGIFLVIPQIQQS 147
Query: 810 FELKASS--------------IRMEELEIQDVQFLHGCQNPTIICIHQ--DVNGRHVKTH 853
+ S +R++ELEI D++FL G +P + +++ + V T+
Sbjct: 148 IKGSRRSRADLDVGNIGNPCVVRLKELEILDLKFLFGTISPVLAVLYKPSGADEMAVNTY 207
Query: 854 EISLKEKEFTKTPWKQDNIE--MEASLVIPVPEPLGGAIIIGQESILY---HSGKSYVAV 908
E+S+K E W+ +++ EA +IPV P G ++IG I Y + K+++ V
Sbjct: 208 ELSVKSGEVKLLDWRIRDLKGGREALFLIPVRPPSNGLLLIGVTKIQYFDNYGNKTFLPV 267
Query: 909 APQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLL 945
P ++ V + + ERY+LGD AG L ML L
Sbjct: 268 DPPMV----WVTWEMLSP--ERYILGDEAGGLHMLTL 298
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 108/233 (46%), Gaps = 25/233 (10%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTY---FVLGTAVVHPEENEPKQGRII 1065
++D F ++ +++L E SL S K F+ GT +E ++GRII
Sbjct: 778 LVDNTAFSVVDSYELNQLELVESLASGKICGGNGLLSEGFLAGTVYPGGGRDESEKGRII 837
Query: 1066 IFHYDDGK-LQQIAEKEIKGACYSM-CEFNGKLLASINSTVRLF--EWTNEKE------- 1114
+F+ + K ++ I + G+ + GK +A+I + L+ ++T+ +
Sbjct: 838 VFNASETKRIKLIVSYDTPGSVNGIQIVGEGKFVAAIGREIHLYSLKYTDIQSKTAASES 897
Query: 1115 -------LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY----KTMEGSFEEISR 1163
+ S + L + V D I V D M ++LQ+ + F E++R
Sbjct: 898 VGATGCTITKLASFKAHSTPLDVAVYNDIIAVCDFMHGPSILQHIEDKENKSSEFVEVAR 957
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
P+W+T++E+LD++ A+ NL + Q+ + +++DR LQ++ ++ +
Sbjct: 958 APKPSWLTALELLDEKTVFCADTDGNLVVWQRQLSGVTEDDRKQLQQIASMKI 1010
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 53
+G LR IR+G+G+ + + ++ GI+G+W+L + D+ LV+SF+ TR+
Sbjct: 402 QGHLRTIRSGVGLYDLGFLGEMSGIRGLWSLRSIPGSSFDDVLVVSFIEETRIF 455
>gi|453081643|gb|EMF09692.1| DNA damage-binding protein 1 [Mycosphaerella populorum SO2202]
Length = 1151
Score = 243 bits (619), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 261/497 (52%), Gaps = 45/497 (9%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R++L D G+L++L++ +K DG + ++ +++LGE S L YLD G VFVGS
Sbjct: 299 QRFVLADDYGKLYLLMVH--QKADGEYQSQQ--IDVLGETSRASTLVYLDEGRVFVGSHQ 354
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ-----------GQGQLVT 188
GDSQ++++ P + V+++F+N+API+D V+D+ + GQ ++VT
Sbjct: 355 GDSQIIQI--LPQR----IEVLQTFSNIAPILDFTVMDMGNRSADAPVNEFSSGQARIVT 408
Query: 189 CSGGFKEGSLRIIRNGIGIEEHACIDLPG--IKGIWALSIGSPKNLDNTLVLSFVGHTRV 246
SG FK+GSLR +R+G+G+E+ + G I +++L G +TL+ SFV H+
Sbjct: 409 GSGAFKDGSLRSVRSGVGLEDKGSLGDLGEPISAVFSLRSGPGVQAVDTLIASFVSHSSA 468
Query: 247 LTL-SGAEVE-ETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
+ S ++E E GF Q T Y G + +QVT S +L TE WE P
Sbjct: 469 IIFGSDGDIEARDEFRGFDLTQSTLYAGELPNGRAVQVTSSTVLLTDTEGDMITDRWEAP 528
Query: 305 NGKSISVVSCNKNQVLCATG-CDVYYLEVHGSEIKQLAHRAL--EYEVACLDISPLSNEE 361
+G SI+ VS + + VL + G + L++ GS I AHR L E +++CL +S
Sbjct: 529 DGSSITSVSADGDHVLVSLGSAALIVLDLSGSSITVGAHRQLGNEEQISCLSLS------ 582
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGE---IIPRSILMTCF--EGHC 416
S P VG W D +LSL L+ + E + + +PRS+++ +
Sbjct: 583 -RSLPGA---CVVGFWKDSKVSVLSLSDLQPIASESVAEDDNLAVPRSLIVASILRDQPA 638
Query: 417 YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSLSTTNVFACSDRPTVI 475
L V L DG++ +S++ + +K + LGTQ RS NVFA + P++I
Sbjct: 639 TLFVGLADGNVVTYSVESLQRPFSARKSIILGTQQANFTVLPRSDGLQNVFATCEHPSLI 698
Query: 476 YSSNHKLVFSNVNLRQVNHMCSLNA-ESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG 534
Y S ++V+S V +C+ ++ Y +S+A+AT S ++DE + H++ +P+
Sbjct: 699 YGSEGRMVYSAVTADSATSICAFDSFGDYANSIAIATGSELKLSSVDEERTTHVQDLPVY 758
Query: 535 EAPRRIAYQESSQTFGV 551
E RRIAY + FG+
Sbjct: 759 ETVRRIAYSSELKAFGL 775
Score = 113 bits (282), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 157/333 (47%), Gaps = 51/333 (15%)
Query: 690 NLVVAKNNRIEIHTVTPEG-------LRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
+L+VAK NR+EI P+ L+ + I YGK+ +++ R T D LF+ T
Sbjct: 28 DLIVAKANRLEIWATNPQQPGDPTLVLQHTRAI--YGKVTMLQKLRPATSPTDHLFVGTD 85
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI 802
RYN L D L+ K+ +++D+ + S+ G IDP AR + L Y G+ +
Sbjct: 86 RYNYFTLSWDADTRRLKT-EKSMVDIADKSARDSQTGDRVHIDPTARFMTLECYEGVVNV 144
Query: 803 IPLEKDNFELKASS------------IRMEELEIQDVQFLHG------CQNPTIICIHQD 844
+P+ + ++ +R+ EL ++ FLH +P +H+D
Sbjct: 145 LPIAHAGKGKRRAADNEIGELGDPIPVRIPELYVRSSCFLHKRHGGTKIADPVFAVLHED 204
Query: 845 V-NGRHVKTHEISLKEK----------EFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIG 893
N +K E+ + E + Q IEM AS +IP+P P G +IIG
Sbjct: 205 SQNMPRIKIRELEYQPSLRPNEEPATAELERGQEVQGKIEMGASHLIPLPAPTYGFLIIG 264
Query: 894 QESILYHSGKSYVAVAPQIIKSSTI-VCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMD 952
+ SI Y Y V Q + +TI V + ++D +R++L D G+L++L++ +K D
Sbjct: 265 ETSISYVDEWKYEIVDTQPLDEATIFVAWCQIDE--QRFVLADDYGKLYLLMV--HQKAD 320
Query: 953 GTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
G + + ++++LGE + S+L Y+ G
Sbjct: 321 GEY--QSQQIDVLGETSRA-----STLVYLDEG 346
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 17/225 (7%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPN---TYFVLGTAVVHPEEN 1057
EV H ++D+ F+ L + L E S+I + FV+GTA + ++
Sbjct: 788 EVRSH-FKLVDEVAFKALDSWALNEDELVESVIRCPLDDGTGLDAERFVVGTAYLDDQDA 846
Query: 1058 EPKQGRIIIFHY-DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRL--FEWTNEK- 1113
+GR+++F +D +++ + E +KGAC + G+++A++ TV + +E++ K
Sbjct: 847 NTARGRVLVFEVTEDRRIKLVTEMAVKGACRCLAVCKGRIVAALVKTVVILAYEFSPPKS 906
Query: 1114 --ELRLECSHFNNI--IALFLKVKGDFILVGDLMRSLTLLQYKT----MEGSFEEISRDY 1165
+L + S+ + I +F I + DLM+SLTL++Y S EI+R +
Sbjct: 907 SPQLIKKASYRTSTAPIDIFASSLDGLIAISDLMKSLTLVKYTPGRTGQPDSLVEIARHF 966
Query: 1166 NPNWMTSIE-ILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
+ W T++ I ++ ++ NL + + D S EDR L+
Sbjct: 967 DTLWGTAVAPIPGTHSYIQSDAEGNLVVLEHDPTGFSAEDRRRLR 1011
>gi|345570887|gb|EGX53705.1| hypothetical protein AOL_s00006g33 [Arthrobotrys oligospora ATCC
24927]
Length = 1133
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/478 (32%), Positives = 246/478 (51%), Gaps = 46/478 (9%)
Query: 112 KVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPII 171
++E LGE+ + YLDNG VF+GS GDS LV+++ G + V++S NLAPI
Sbjct: 312 RIENLGEVCQARAIVYLDNGYVFLGSHFGDSTLVRIS----SKGPRIEVVQSLPNLAPIS 367
Query: 172 DMVVVDLE---------RQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGI 221
D +V+ E GQ ++TCSGGF +G LR +R+G+GI + + ++ G++ +
Sbjct: 368 DFIVLGTEVGGVEIHQYSAGQTMILTCSGGFYDGGLRSVRSGVGIRDIGLLGEMSGVQNM 427
Query: 222 WALSIGSPKN-LDNTLVLSFVGHTRVLTLSG-AEVEETE-MGGFTSDQQTFYCGNVDPRT 278
WAL N D+TL+ SF +R EVEE + F D T GNV
Sbjct: 428 WALKRAILDNGFDDTLLFSFANESRAFAFGADGEVEEVDTFENFFLDTTTLEAGNVGNDK 487
Query: 279 VLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ-VLCATGCDVYYLEVHGSEI 337
++QVTP I++ ++ +++ +W PP G I + S + + V+ G ++ I
Sbjct: 488 LVQVTPFKVIVVE-KATSKLWNWAPPVGAKIVMASLSGARLVVVLNGRICLLFDLSSEPI 546
Query: 338 KQLAHRALEYEVACLDISPLSNEETSSEPAK-AQLAAVGLWTDISARLLSLPSLEEVCKE 396
KQ+A+R E E++C+ I P K + VG W S LL + LE + +E
Sbjct: 547 KQIANRTFENEISCIHI-----------PTKQSDFLVVGFWMPASLALLRIADLETMKEE 595
Query: 397 PLG---GEIIPRSILMTCFEGH--CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQP 451
L G + PRS+++ EG L V + DG + +++ G L D+K++ LGTQ
Sbjct: 596 HLAVFEGSV-PRSVMVANMEGDGPSSLFVGMADGEVISYTITEGPGILDDQKRIRLGTQT 654
Query: 452 TVLKTFRSL------STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPD 505
TF +L ++ V A +RPT++Y + V+S + L Q + + + NAE++PD
Sbjct: 655 V---TFEALPRKTGDDSSCVIATGERPTMVYGEEGRTVYSAITLNQASSVVAFNAEAFPD 711
Query: 506 SLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADG 563
++ +ATD + IDE + H R PL + RR+A+ + + +GV T R I G
Sbjct: 712 TVVVATDESVFIAKIDEARTTHTRMSPLCQFARRVAFSKEKKAYGVATIRNSIDTTTG 769
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 142/267 (53%), Gaps = 24/267 (8%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+LV+AK+NRIE++ + PEGL V +YG++ + R D LF+ T RY +
Sbjct: 28 SLVIAKSNRIEVYDLIPEGLEQVAHFAVYGRVTGLLSLRPQQSTLDHLFLGTDRYEYFTV 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD- 808
+ KAH +V+DR +P++ G + + DP R++GL LY G+F IP+++
Sbjct: 88 SWDSQTGTIRNERKAH-DVTDRFQRPAQVGHLYLADPGGRLLGLYLYEGIFTAIPIKRQS 146
Query: 809 -----NFELKASS---------IRMEELEIQDVQFLHGCQNPTIICIHQDVNGR-HVKTH 853
+ +L + IRM EL++ ++ FL+G P I ++ D H+ T+
Sbjct: 147 KGRGRHAQLPEAEIGNLDDPCPIRMNELKVINMVFLYGTSVPVIAVLYTDSKKLVHLITY 206
Query: 854 EI-----SLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAV 908
E+ ++K+ EF + K +N++ A L+IPV P GG ++IG++ + Y + V +
Sbjct: 207 ELNVAKRAVKDPEFAQWGIKANNLDHGAKLLIPVDNPTGGILVIGEQVVSYFHPERTVPM 266
Query: 909 APQIIKSSTIVCYAKVDANGERYLLGD 935
+ + ++ V + K+D ERYLL D
Sbjct: 267 KKPLHEPTSFVTHGKIDP--ERYLLSD 291
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 124/232 (53%), Gaps = 18/232 (7%)
Query: 1000 MEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTY---FVLGTAVVHPEE 1056
ME + +ID+N ++ + A++L+P E SL+ + T FV+GTA+ + +
Sbjct: 770 MESSSCYIHVIDENFYDKIDAYELYPNELVESLLCASLANPDGTISEKFVVGTAIGN-DS 828
Query: 1057 NEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK-E 1114
+E + GR++ D L+ I E E+ GAC+S+ G +LA ++ ++ L+ ++ +
Sbjct: 829 DESEHGRLLFLELGADKMLRLITELELPGACHSLAIVKGYILAGLSKSIDLYRFSYTRGS 888
Query: 1115 LRLECSHFNNIIA----LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFE------EISRD 1164
L ++I A + L V G + VGDL++ + +L+ +EG E E+ R
Sbjct: 889 LGASIQQISSIRAATLPVSLSVYGKRVFVGDLVKGVMVLE--VVEGGGEGNDKLVEVCRQ 946
Query: 1165 YNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
Y +W+T++E LD++ + A++ NL + +++S +DED ++ + + L
Sbjct: 947 YGVSWVTALEALDEDTCISADSDGNLVLLRRESTGATDEDTRRMRPLSEIRL 998
>gi|440639387|gb|ELR09306.1| hypothetical protein GMDG_03874 [Geomyces destructans 20631-21]
Length = 1138
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 168/532 (31%), Positives = 280/532 (52%), Gaps = 49/532 (9%)
Query: 47 VGHTRVLTLSGAEWGF--HLLRGFSSLGSLWNGWSE-RYLLGDLAGRLFMLLLEKEEKMD 103
VG TR+L L H+L +S+ W + RYLLGD G L +L L + ++
Sbjct: 261 VGETRMLYLDDESKATVEHVLDE-ASIFVAWTAYDGLRYLLGDEYGWLHLLTLVVDAEVV 319
Query: 104 GTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMES 163
++K+ IS P + L++ ++F+GS GDSQ++KL D + V+++
Sbjct: 320 TGMTIKK-----FVRISRPSTMVCLEDDLLFIGSHDGDSQVLKL----DLDAKVAEVVQT 370
Query: 164 FTNLAPIIDMVVVDLERQ-----------GQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
N+API+D V+D+ + GQ ++VT SG F+EGSLR +R+G+G+E+
Sbjct: 371 LDNIAPIVDFTVMDMGSRSEEARANEFSSGQARIVTGSGAFQEGSLRSVRSGVGLEDIGQ 430
Query: 213 I-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG--GFTSDQQTF 269
+ ++ IKG++ L + + +TLV+SF TRV E G + ++ T
Sbjct: 431 LGEMDNIKGLYTLQTNNSE-FHDTLVISFSTETRVFRFDSEGEVEEVEEFLGLSFEEHTL 489
Query: 270 YCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKN-QVLCATGCDVY 328
NV +LQ+TPS A+LI +ES V+SW+P G+ I+ S N++ +L A G +
Sbjct: 490 LAANVSNGRILQITPSKALLIDSESGVAVASWQPAPGEIITAASTNEDYALLSADGKSLI 549
Query: 329 YLEVHGSEIKQLAHRAL--EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLS 386
L + +++ ++A + +VAC+D+ N ET + VGLW S ++
Sbjct: 550 SLNLD-NDLSEIARQDFGDTDQVACVDVP---NTETP-------IGLVGLWQSGSVSIID 598
Query: 387 LPSLEEVCKEPLGGE---IIPRSILMTCFEGHCY---LLVALGDGSMFYFSLDPASGRLT 440
L +L + + L + +PRS+++ + LLVA+ DG + +S+ P + LT
Sbjct: 599 LRTLHPIQGDTLRNDDTAAVPRSMVLAQILPKTFGPTLLVAMSDGVVHSYSVTPCTFALT 658
Query: 441 DKKKVTLGTQPTVLKTF-RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN 499
++K V LGTQ L+ R+ NVFA + ++IYSS ++++S V +C N
Sbjct: 659 NRKSVVLGTQQANLRVLPRAGGLMNVFATCEHSSLIYSSEGRIIYSAVTAEDATFICPFN 718
Query: 500 AESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
A +YPD++ +AT S ID ++ H+RT+P+GE RR+ Y S + FG+
Sbjct: 719 AAAYPDAIVVATASEIKISQIDTERRTHVRTLPMGETVRRVTYSPSEKVFGL 770
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 131/287 (45%), Gaps = 35/287 (12%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILE 750
LVVAK+NR+EI T TP GL+ L+ +I ++ R PT LF+ T R + L
Sbjct: 29 LVVAKSNRLEIWTSTPTGLQLAHTRTLHARITMLAAIRPPTSCTAHLFVGTTRAHYFTLA 88
Query: 751 CRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNF 810
LE + A + S++ + + G +DP R + L L+ G+ + + K
Sbjct: 89 WDAATRRLETV-HAFVDASEKHMRDAAGGERCAVDPSGRQLCLSLFEGVLSFVKVMKPRK 147
Query: 811 ELKASS-------IRMEELEIQDVQFLHG-CQNPTIICIHQDVNGR-HVKTHEISLKEKE 861
A S IR+ EL ++ FLH +P + ++QD R + T+ ++ +
Sbjct: 148 VAAAGSYLDDPEQIRITELFVRATVFLHTESTSPKVALLYQDGRDRVGLATYRVTDGRGQ 207
Query: 862 ---FTKTPWKQD--NIEMEASLVIPVPE------------------PLGGAIIIGQESIL 898
F ++D +E+ AS +IPVP+ LGG I++G+ +L
Sbjct: 208 YGGFDPRKAREDELGVEVGASHLIPVPKGEGVQRRYVVRNNASLKAQLGGVIVVGETRML 267
Query: 899 YHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLL 945
Y +S V + ++S V + D G RYLLGD G L +L L
Sbjct: 268 YLDDESKATVEHVLDEASIFVAWTAYD--GLRYLLGDEYGWLHLLTL 312
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 107/191 (56%), Gaps = 16/191 (8%)
Query: 1041 PNTY------FVLGTAVVHPEENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFN 1093
PNTY F++GT+ + +GRI++F D + +IAE ++KGAC + +
Sbjct: 823 PNTYGTPQERFIVGTSFLDDNPGLSYRGRILVFGVDSSRNPYKIAEYKVKGACRCLGVID 882
Query: 1094 GKLLASINSTVRLFEWT--NEKELRLE--CSHFNNIIALFLKVKGDFILVGDLMRSLTLL 1149
GK++A++ T+ +FE+T + R+E S+ + + L ++G+ I V DLM+S++L+
Sbjct: 883 GKIVAALVKTIVVFEYTELSGTSARIEKVASYRTSTCPVDLAIEGNTIAVADLMKSVSLV 942
Query: 1150 QYKTMEG----SFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDR 1205
+Y+ + E++R + W T++ + DE +L A+ NL + +++ AA + EDR
Sbjct: 943 EYRAGTSGEAPTLVEVARHFQSVWATAVAHV-DEGWLEADADGNLIVLRRNEAAVTFEDR 1001
Query: 1206 THLQEVGTVHL 1216
++ G HL
Sbjct: 1002 KKMEVTGEFHL 1012
Score = 42.4 bits (98), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 634 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 686
LVVAK+NR+EI T TP GL+ L+ +I ++ R PT LF+ T R
Sbjct: 29 LVVAKSNRLEIWTSTPTGLQLAHTRTLHARITMLAAIRPPTSCTAHLFVGTTR 81
>gi|242803623|ref|XP_002484212.1| UV-damaged DNA binding protein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717557|gb|EED16978.1| UV-damaged DNA binding protein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1140
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 273/516 (52%), Gaps = 50/516 (9%)
Query: 72 GSLWNGW----SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
+++ W +R+LL D GRLF L+L +D V+ K++ LG S L Y
Sbjct: 284 ATIFVAWVQVDGQRWLLADDYGRLFFLML----VLDSRNEVEGWKIDYLGSASRASVLIY 339
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ------ 181
L G+ F+GS GDSQ+++++ G++ ++++ +N+API+D ++DL +
Sbjct: 340 LGAGMTFIGSHQGDSQVIRIS-----EGSF-EIIQTISNIAPILDFTIMDLGTREGDNYT 393
Query: 182 -----GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNT 235
GQ ++VT SG F +G+LR +R+G+G+EE + ++ I +WAL + S +T
Sbjct: 394 HEFSSGQARIVTGSGAFNDGTLRSVRSGVGMEELGVLGEMEHITDMWALQVSSTDEFSDT 453
Query: 236 LVLSFVGHTRVLTLSG-AEVEE-TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
LV++FV TR+ S EVEE E G + T N+ ++ VT + T+
Sbjct: 454 LVVTFVNETRIFQFSSDGEVEELDEFLGLNLAENTLLSNNLPGGRIIHVTERGVSIADTD 513
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCATGCDV-YYLEVHGSEIKQLAHRALEY--EVA 350
S +S W P + ++I+ +CN +++ TG V L++ G ++K L+ + + +V+
Sbjct: 514 SGMVISKWSP-DEQTITSAACNDERLVVVTGGQVIVVLDITG-DLKVLSQKDFDKDNQVS 571
Query: 351 CLDISPLSNEE-TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSI 407
+ I P S + ++ P KAQ+A +LS +E+ + LG E PR++
Sbjct: 572 GVTIPPASTQAFIAAFPQKAQVA-----------VLSFQDFKELHSQSLGIASEAFPRAV 620
Query: 408 LMTCF--EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTN 464
L+ + L V++ DGS+ F D + LT K K+ LG+ QPT K R N
Sbjct: 621 LLAEILEDSPSTLFVSMADGSVVTFFYDSDNHSLTSKNKLILGSEQPTFKKLPRGNGLYN 680
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
VFA + P++IY S ++++S VN + +C NAE+YPD++A+AT +D+ +
Sbjct: 681 VFATCEHPSLIYGSEGRIIYSAVNSEGASRVCHFNAEAYPDAIAVATSKDLKIALVDKER 740
Query: 525 KLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
I+T+P+ RR+AY + + FG+ T + +Q+
Sbjct: 741 TTQIQTLPIEATVRRVAYSPTEKAFGIGTIKRRLQD 776
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 161/331 (48%), Gaps = 48/331 (14%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKK-DLLFIITQRYNAMIL 749
LVVAK R+E +++TP+GL LY KI+++ PT+ D L + T + L
Sbjct: 29 LVVAKGARLEFYSITPDGLTLTTSRALYAKISMLARLPTPTNSTTDHLLVGTDQNTYFTL 88
Query: 750 ECRGDIDNLEILT-KAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
+ D + + T +++ +++D+ +P +NG +IDP R + L ++ G+ +IP+ +
Sbjct: 89 --KWDSEKQRVRTERSYVDLADKASRPCQNGDRCLIDPSGRFMTLEMFEGIITVIPIIQP 146
Query: 809 NFE------LKASS-------------------IRMEELEIQDVQFLH--GCQNPTIICI 841
+ + LK S R++EL ++ FLH P + +
Sbjct: 147 HKKRGKPPVLKTSHYSNPDEPVPQIGELGEPMPTRIDELMVRSSAFLHVESKAAPRLALL 206
Query: 842 HQDVNGRHVKT-----HEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQES 896
H+D N R V+ H + E F +T + +++ AS +IPVP PLGG +++G+
Sbjct: 207 HED-NQRKVRLKIRELHFEASTEVVFQETEDFTEELDLGASHLIPVPAPLGGLLVLGETC 265
Query: 897 ILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFS 956
I Y + ++ + +++ V + +VD G+R+LL D GRLF L+L +D
Sbjct: 266 IKYIDDANNETISRPLDEATIFVAWVQVD--GQRWLLADDYGRLFFLML----VLDSRNE 319
Query: 957 VKEPKVELLGEHCKGPVVEMSSLSYIKPGST 987
V+ K++ LG + V L Y+ G T
Sbjct: 320 VEGWKIDYLGSASRASV-----LIYLGAGMT 345
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 121/242 (50%), Gaps = 18/242 (7%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTY--------FVLGTAVV 1052
E+ ++ D+ F L + L P E S+I ++ + Y F++GTA +
Sbjct: 779 EIVESQFVLADEIMFRKLDSFDLKPDELVESVIRAQMVVGSDAYNKPIYKDRFIVGTAYL 838
Query: 1053 HPEENEPKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTN 1111
E E +GRI++F D KL E +KGAC ++ K++A++ TV +F+
Sbjct: 839 DDETAESIRGRILLFEVDSNRKLSLFLEHPVKGACRALAMMGNKIVAALVKTVVIFDVER 898
Query: 1112 EKE-----LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQ-YKTMEGSFE--EISR 1163
+ + L+ ++ + + + V I+V DLM+S+++++ +KT + E E++R
Sbjct: 899 KSQLGKHALKKVAAYRTSTAPVDIAVTDSTIVVADLMKSISIVESHKTDALTVEAKEVAR 958
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLVQ 1223
+ W T++ + +L ++ NL + +++ ++EDR L EV + L+G+ + +
Sbjct: 959 HFATVWTTAVADIGSNQWLVSDAEGNLIVLRRNVDGVTEEDRRRL-EVTSELLLGEMVNR 1017
Query: 1224 CR 1225
R
Sbjct: 1018 IR 1019
Score = 47.8 bits (112), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+G+LR +R+G+G+EE + ++ I +WAL + S +TLV++FV TR+ S
Sbjct: 412 DGTLRSVRSGVGMEELGVLGEMEHITDMWALQVSSTDEFSDTLVVTFVNETRIFQFS 468
>gi|255316764|gb|ACU01763.1| putative DNA damage binding protein [Brachypodium distachyon]
Length = 384
Score = 239 bits (611), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 157/220 (71%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E E H + ++D TFE L H L E S+IS F +D N Y+ +GTA V PEENEP
Sbjct: 36 ESEAHFIRLLDHQTFEFLSTHPLDQYECGCSMISCSFSDDNNFYYCVGTAYVLPEENEPT 95
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK----ELR 1116
+GRI++F +DG+LQ I EKE KGA YS+ FNGKLLA+IN ++L++W + EL+
Sbjct: 96 KGRILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMTREDGSHELQ 155
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+ALF + +GDFI+VGDLM+S++LL YK E + EE++RDYN NWMT++E++
Sbjct: 156 SECGHHGHILALFTQTRGDFIVVGDLMKSISLLVYKHEESAIEELARDYNANWMTAVEMI 215
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DD++++GAENSYNLF +K+S A +DE+R L+ VG HL
Sbjct: 216 DDDIYVGAENSYNLFTVRKNSDAATDEERGRLEVVGEYHL 255
>gi|121699866|ref|XP_001268198.1| UV-damaged DNA binding protein, putative [Aspergillus clavatus NRRL
1]
gi|119396340|gb|EAW06772.1| UV-damaged DNA binding protein, putative [Aspergillus clavatus NRRL
1]
Length = 1140
Score = 239 bits (610), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 164/520 (31%), Positives = 270/520 (51%), Gaps = 43/520 (8%)
Query: 72 GSLWNGW----SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
+++ W S+R+LL D GRLF L+L +D V+ K++LLG+ S L Y
Sbjct: 284 ATIFVAWEQVDSQRWLLADDYGRLFFLML----VLDSDNQVESWKLDLLGKTSRASVLVY 339
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ- 181
L GV+F+GS GDSQ+++++ NG+ V V+++ N+API+D ++DL E Q
Sbjct: 340 LGGGVLFLGSHQGDSQVLRIS-----NGS-VDVVQTLPNIAPILDFTIMDLGSRTSESQT 393
Query: 182 -----GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNT 235
GQ ++VT SG F +G+LR +R+G+G+EE + ++ I +W L +GS + +
Sbjct: 394 HEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGEMDHITDLWGLQVGSKGDFLDI 453
Query: 236 LVLSFVGHTRVLTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
L+++FV TRV S EVEE + G + + T N+ +LQVT ++ E
Sbjct: 454 LLVTFVDETRVFHFSPDGEVEEMDHFLGLSLSENTLLAANLPGGRILQVTERRVLIAEVE 513
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLD 353
W PPN I+ S N + ++ G ++ + G+E++ + +
Sbjct: 514 GGMVTYEWTPPNQLIITAASTNNDMIVLVAGGELVTVLDIGNEVRLVTQKDFGAN----- 568
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT- 410
S +S + P +A +S +L L L EV +G GE PRS+L+
Sbjct: 569 -SQISGVTVPASPTGVFIAGFPQLAKVS--VLKLQDLAEVQSTSVGPAGEAFPRSVLVAD 625
Query: 411 -CFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFAC 468
+ L +++ DGS+ +S +P LT K+ LG+ QPT K R NVFA
Sbjct: 626 VLSDSPPTLFISMADGSVITYSFNPDDVSLTGMTKLILGSEQPTFKKLPRGDGLFNVFAT 685
Query: 469 SDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHI 528
+ P++IY S ++++S VN + +C LN+E+YP S+A+AT +D+ + I
Sbjct: 686 CENPSMIYGSEGRIIYSAVNSEGASRICHLNSEAYPGSIAVATLHDLKIALVDKERTTQI 745
Query: 529 RTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVR 568
+T+P+G RR+AY S + FG+ T I+ + DG+ V+
Sbjct: 746 QTLPIGATVRRVAYSPSEKAFGIGT--IERKLVDGAEIVK 783
Score = 113 bits (283), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 151/316 (47%), Gaps = 39/316 (12%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-KDLLFIITQRYNAMIL 749
LVVAK+NR+E + TP+GL V Y ++ ++ P + D LF+ T RY L
Sbjct: 29 LVVAKSNRLEFYVPTPDGLNLVTSCAAYARVTMLARLPAPANSPTDHLFVGTDRYTYFTL 88
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPL---- 805
+ + + + ++SD + S+ G +IDP R + L +Y G+ ++P+
Sbjct: 89 SWDSSKNQVRT-EREYVDISDPSSRESQTGNRCLIDPSGRFMTLEIYEGVIAVVPIIQLP 147
Query: 806 ---EKDNFELKA-------------SSIRMEELEIQDVQFLHGCQN-PTIICIHQDVNGR 848
N L + ++ R+EEL ++ FLH + P + +++D +
Sbjct: 148 SKKRGRNVALPSGPDAPRVGELGEPATARIEELFVRSSAFLHVQEGLPRLALLYEDNQKK 207
Query: 849 ----------HVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESIL 898
H T ++ + F + +E+ +S +IPVP PLGG +I+G+ SI
Sbjct: 208 VRLRVRELQYHAATGSTNIADATFGEPADFTQELELGSSHLIPVPAPLGGLLILGETSIK 267
Query: 899 YHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVK 958
Y + ++ + +++ V + +VD+ +R+LL D GRLF L+L +D V+
Sbjct: 268 YVDADNNEIISRPLDEATIFVAWEQVDS--QRWLLADDYGRLFFLML----VLDSDNQVE 321
Query: 959 EPKVELLGEHCKGPVV 974
K++LLG+ + V+
Sbjct: 322 SWKLDLLGKTSRASVL 337
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 121/233 (51%), Gaps = 17/233 (7%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF--------GEDPNTYFVLGTAVV 1052
E+ ++ D+ F L A +L P E S+I ++F G F++GTA +
Sbjct: 780 EIVKSEFMLADEILFRRLDAFELRPEELVESVIRAEFPVGKDEKNGATVKDRFIVGTAFL 839
Query: 1053 HPEENEPKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT- 1110
E +E +GRI+IF D+G KL Q+AE +KGAC ++ +++A++ TV +++
Sbjct: 840 DDEGDESIRGRILIFEVDNGRKLTQVAELPVKGACRALAMLGNRIVAALVKTVVVYKAVS 899
Query: 1111 -NEKELRLE--CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTME----GSFEEISR 1163
N ++LE S+ + + + V G+ I V DLM+S+ L++YK E + E++R
Sbjct: 900 NNFGAMKLEKLASYRTSTAPVDVTVTGNLIAVSDLMKSVCLVEYKEGEDGLPDTLTEVAR 959
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+ W T + + + FL ++ NL I +++ ++D+ L+ G + L
Sbjct: 960 HFQTVWATGVACIAQDTFLESDAEGNLIILCRNTTGVEEDDKRRLEVTGEISL 1012
Score = 43.5 bits (101), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+G+LR +R+G+G+EE + ++ I +W L +GS + + L+++FV TRV S
Sbjct: 412 DGTLRSVRSGVGMEELGVLGEMDHITDLWGLQVGSKGDFLDILLVTFVDETRVFHFS 468
>gi|119471789|ref|XP_001258220.1| UV-damaged DNA binding protein, putative [Neosartorya fischeri NRRL
181]
gi|119406372|gb|EAW16323.1| UV-damaged DNA binding protein, putative [Neosartorya fischeri NRRL
181]
Length = 1140
Score = 239 bits (609), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 162/520 (31%), Positives = 268/520 (51%), Gaps = 43/520 (8%)
Query: 72 GSLWNGW----SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
+++ W S R+LL D GRLF L+L +D V+ K++ LG S L Y
Sbjct: 284 ATIFVAWEQVDSRRWLLADDYGRLFFLML----VLDSDSQVESWKLDHLGNTSRASVLVY 339
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ- 181
L GV+F+GS GDSQ+++++ P E V+++ +N+API+D ++DL E Q
Sbjct: 340 LGGGVLFLGSHQGDSQVLRISNGPLE------VVQTLSNIAPILDFTIMDLGNRSSESQT 393
Query: 182 -----GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNT 235
GQ ++VT SG F +G+LR +R+G+G+EE + D+ I +W L +GS + +T
Sbjct: 394 HEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGDMEHITDLWGLQVGSIGDFLDT 453
Query: 236 LVLSFVGHTRVLTLSG-AEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
L+++FV TRV S EVEE + G + + T N+ +LQVT ++ E
Sbjct: 454 LLVTFVDETRVFRFSSDGEVEEMDHFLGLSLSESTLLATNLPGGRILQVTEQRVLIAEVE 513
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLD 353
+ W PPN I+ S N + ++ G ++ + +E++ + + +
Sbjct: 514 GGMVIYEWTPPNQLIITAASANDDSIVLVAGGELVTVLNITNEVQIVTQKDFGAD----- 568
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT- 410
S +S S P +A +S +L L L E+ +G GE PRS+L+
Sbjct: 569 -SQISGVTVPSSPTGVCIAGFPQLAKVS--VLKLQDLSELHTTSVGLAGEAFPRSVLVAN 625
Query: 411 -CFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFAC 468
+ L V++ DGS+ +S + LT K+ LG+ QPT K R + NVFA
Sbjct: 626 VLTDSPPTLFVSMADGSVITYSFNTDDYSLTGMTKLILGSEQPTFKKLPRGIGLFNVFAT 685
Query: 469 SDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHI 528
+ P++IY S ++++S VN + +C N+E+YP+S+A+AT +D+ + I
Sbjct: 686 CENPSMIYGSEGRIIYSAVNSEGASRICHFNSEAYPESIAVATSHDLKIALVDKERTTQI 745
Query: 529 RTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVR 568
+T+P+G RR+AY S + FG+ T I+ + DG+ V+
Sbjct: 746 QTLPIGATVRRVAYSPSEKAFGIGT--IERKLVDGAEIVK 783
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 151/317 (47%), Gaps = 41/317 (12%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-KDLLFIITQRYNAMIL 749
LVVAK+NR+E ++ TP+GL V +Y ++ ++ P + D LF+ T RY L
Sbjct: 29 LVVAKSNRLEFYSPTPDGLDLVASCAIYARVTMLARLPAPANSPTDHLFVGTDRYTYFTL 88
Query: 750 ECRGDIDNLEILT-KAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
D + T + + ++SD + S+ G +IDP R + L +Y G+ +IP+ +
Sbjct: 89 SW--DSSEKRVRTERDYVDMSDPSSRESQTGNRCLIDPSGRFMTLEIYEGVIAVIPIIQL 146
Query: 809 NFELKASSI--------------------RMEELEIQDVQFLHGCQN-PTIICIHQDVNG 847
+ + ++ R+EEL ++ FLH + P + +++D
Sbjct: 147 PSKKRGRAVALPSGPDAPRVGELGEPTTARIEELFVRSSAFLHVQEGLPRLALLYEDNQK 206
Query: 848 R----------HVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESI 897
+ H T S + F + ++E+ +S +IPVP PLGG +I+G+ SI
Sbjct: 207 KVRLRVRELQYHAATGSNSTADATFGEPADFTQDLELGSSHLIPVPAPLGGLLILGEMSI 266
Query: 898 LYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSV 957
Y + ++ + +++ V + +VD+ R+LL D GRLF L+L +D V
Sbjct: 267 KYVDADNNEIISRPLDEATIFVAWEQVDSR--RWLLADDYGRLFFLML----VLDSDSQV 320
Query: 958 KEPKVELLGEHCKGPVV 974
+ K++ LG + V+
Sbjct: 321 ESWKLDHLGNTSRASVL 337
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 122/233 (52%), Gaps = 17/233 (7%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF--GEDPNTY------FVLGTAVV 1052
E+ ++ D+ F L A +L P E S+I ++F G+ N F++GTA +
Sbjct: 780 EIVKSRFVLADEILFRRLDAFELRPEELVESVIRAEFPAGKGANDRDEVKDRFIVGTAYL 839
Query: 1053 HPEENEPKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTN 1111
E +E +GRI+IF D+G KL Q+AE +KGAC ++ K++A++ TV ++ N
Sbjct: 840 DDEGDESIRGRILIFEVDNGRKLTQVAELPVKGACRALAMLGDKIVAALVKTVVVYRVIN 899
Query: 1112 EK--ELRLE--CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEISR 1163
+RLE S+ + + + V G+ I V DLM+S+ L++YK E + E++R
Sbjct: 900 NNFGAMRLEKLASYRTSTAPVDVTVTGNLIAVSDLMKSMCLVEYKEGENGTPDTMTEVAR 959
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+ W T + + + FL ++ NL + +++ ++D+ L+ G + L
Sbjct: 960 HFQTVWATGVANIAPDTFLESDAEGNLIVLHRNTTGVEEDDKRRLEVTGEISL 1012
Score = 47.4 bits (111), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+G+LR +R+G+G+EE + D+ I +W L +GS + +TL+++FV TRV S
Sbjct: 412 DGTLRSVRSGVGMEELGVLGDMEHITDLWGLQVGSIGDFLDTLLVTFVDETRVFRFS 468
>gi|154303693|ref|XP_001552253.1| hypothetical protein BC1G_08731 [Botryotinia fuckeliana B05.10]
Length = 1087
Score = 239 bits (609), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 275/507 (54%), Gaps = 52/507 (10%)
Query: 74 LWNGW---SER-YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLD 129
LW W ER YLLGD G L++L + +DG +V +V LG++S P L L
Sbjct: 217 LWAAWEPIDERTYLLGDDYGFLYILTI----LVDGA-TVTGLQVVKLGQVSKPTSLENLG 271
Query: 130 NGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ--- 181
NGV ++ S D+Q+V+++ E+G V+++++ N+API+D V+D+ E Q
Sbjct: 272 NGVFYIASHEADNQVVQIDLESPEHG--VTLLQTLPNIAPILDFTVMDMGGREGETQLNE 329
Query: 182 ---GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLV 237
GQ +LVT SGGF+ GSLR +R+G+G+++ A + ++ GI+ ++AL G P ++TLV
Sbjct: 330 YSSGQARLVTGSGGFEGGSLRSVRSGVGLDDTAILAEMEGIRKVFALHSG-PTLPNDTLV 388
Query: 238 LSFVGHTRVLTL-SGAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+SF TR + ++EE E + +S +T N+D +LQVT +S K
Sbjct: 389 VSFSTETRFFKFDTQGDIEEVETVKNLSSTSETLLTYNLDEGCILQVTQHE---VSIYGK 445
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCAT-GCDVYYLEVHGSEIKQLAHRAL-EYEVACLD 353
+ W+PPNG+ I+ S N+N +L ++ G ++ L + + ++A + L + +VAC+
Sbjct: 446 SPGHRWQPPNGQIITAASGNQNYILLSSNGRTLFTLSIQ-QNLAEVAFQELGDDQVACIH 504
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPL---GGEIIPRSILMT 410
+ + + + VGLW S LL L +L + E L G IPR I +T
Sbjct: 505 VPQVMGD----------IGVVGLWKSGSVSLLDLATLNTIVSEDLRRADGASIPRDIALT 554
Query: 411 C-----FEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSLSTTN 464
G L V++ DG + F++D + L+ +K + LGTQ L+ R +T N
Sbjct: 555 QILPPELSGPT-LFVSMEDGIVLSFNVDKSDCSLSGRKSIVLGTQQAQLQILPRDNTTFN 613
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
VFA + P++IY S + V+S V +CSLN+ +YP S+ +AT + ID +
Sbjct: 614 VFATCEHPSLIYGSEGRTVYSAVTAEDAIAVCSLNSVAYPGSVVVATINELKLAVIDNER 673
Query: 525 KLHIRTVPLGEAPRRIAYQESSQTFGV 551
+ H+RT+P+GE RR+AY ++F +
Sbjct: 674 RTHVRTLPIGETVRRVAYSAKEKSFAI 700
Score = 66.6 bits (161), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 94/174 (54%), Gaps = 10/174 (5%)
Query: 1045 FVLGTAVVHPEENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINST 1103
F++GT+ +H EE + GR++IF + D IA +KG+C + +GK++A++N T
Sbjct: 763 FLVGTSFLHEEEANVR-GRLLIFGVNADRAPYMIASHNLKGSCRCIGVLDGKIVAALNKT 821
Query: 1104 VRLFEW----TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT----ME 1155
V ++++ + L+ ++ + + + + + I V D+M+S+ L++Y +
Sbjct: 822 VVMYDYEETSSTSATLKKLATYRCSTCPIDIDITDNIIAVADIMKSIALVEYTPGADGLP 881
Query: 1156 GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
EE++R + TS+ +D + +L ++ NL + +++ + ED+T ++
Sbjct: 882 DKLEEVARHAQQVFSTSVAEVDTDTYLETDHDGNLILLKRNREGVTREDKTRME 935
Score = 47.8 bits (112), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 502 SYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
+YP S+ +AT + ID ++ H+RT+P+GE RR+AY ++F +
Sbjct: 4 TYPGSVVVATINELKLAVIDNERRTHVRTLPIGETVRRVAYSAKEKSFAI 53
Score = 42.0 bits (97), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 1045 FVLGTAVVHPEENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINST 1103
F++GT+ +H EE + GR++IF + D IA +KG+C + +GK++A++N T
Sbjct: 116 FLVGTSFLHEEEANVR-GRLLIFGVNADRAPYMIASHNLKGSCRCIGVLDGKIVAALNKT 174
Query: 1104 VRLFEWTNEKEL 1115
V + T + L
Sbjct: 175 VVMNATTAKANL 186
>gi|347838030|emb|CCD52602.1| similar to DDB1B (Damaged DNA Binding protein 1 B); damaged DNA
binding / protein binding [Botryotinia fuckeliana]
Length = 1157
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 275/507 (54%), Gaps = 52/507 (10%)
Query: 74 LWNGW---SER-YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLD 129
LW W ER YLLGD G L++L + +DG +V +V LG++S P L L
Sbjct: 287 LWAAWEPIDERTYLLGDDYGFLYILTI----LVDGA-TVTGLQVVKLGQVSKPTSLENLG 341
Query: 130 NGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ--- 181
NGV ++ S D+Q+V+++ E+G V+++++ N+API+D V+D+ E Q
Sbjct: 342 NGVFYIASHEADNQVVQIDLESPEHG--VTLLQTLPNIAPILDFTVMDMGGREGETQLNE 399
Query: 182 ---GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLV 237
GQ +LVT SGGF+ GSLR +R+G+G+++ A + ++ GI+ ++AL G P ++TLV
Sbjct: 400 YSSGQARLVTGSGGFEGGSLRSVRSGVGLDDTAILAEMEGIRKVFALHSG-PTLPNDTLV 458
Query: 238 LSFVGHTRVLTL-SGAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+SF TR + ++EE E + +S +T N+D +LQVT +S K
Sbjct: 459 VSFSTETRFFKFDTQGDIEEVETVKNLSSTSETLLTYNLDEGCILQVTQHE---VSIYGK 515
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCAT-GCDVYYLEVHGSEIKQLAHRAL-EYEVACLD 353
+ W+PPNG+ I+ S N+N +L ++ G ++ L + + ++A + L + +VAC+
Sbjct: 516 SPGHRWQPPNGQIITAASGNQNYILLSSNGRTLFTLSIQ-QNLAEVAFQELGDDQVACIH 574
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPL---GGEIIPRSILMT 410
+ + + + VGLW S LL L +L + E L G IPR I +T
Sbjct: 575 VPQVMGD----------IGVVGLWKSGSVSLLDLATLNTIVSEDLRRADGASIPRDIALT 624
Query: 411 C-----FEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSLSTTN 464
G L V++ DG + F++D + L+ +K + LGTQ L+ R +T N
Sbjct: 625 QILPPELSGPT-LFVSMEDGIVLSFNVDKSDCSLSGRKSIVLGTQQAQLQILPRDNTTFN 683
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
VFA + P++IY S + V+S V +CSLN+ +YP S+ +AT + ID +
Sbjct: 684 VFATCEHPSLIYGSEGRTVYSAVTAEDAIAVCSLNSVAYPGSVVVATINELKLAVIDNER 743
Query: 525 KLHIRTVPLGEAPRRIAYQESSQTFGV 551
+ H+RT+P+GE RR+AY ++F +
Sbjct: 744 RTHVRTLPIGETVRRVAYSAKEKSFAI 770
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 132/290 (45%), Gaps = 40/290 (13%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILE 750
LV+AK NR+EI T +GL +YG+I++++ + K D LF+ T R +
Sbjct: 29 LVLAKANRLEIWRATEDGLTMAYSKSIYGRISMLQKIQPAGSKTDHLFVGTVRAQYFTVM 88
Query: 751 CRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPL----- 805
L+ + ++ +VS + SE+ ++DP R++ + LY G+ ++ +
Sbjct: 89 WNPQTHKLDTM-QSFVDVSQEHMRDSESRDRCLVDPTGRLLVMELYEGVLNLVKIVKPRG 147
Query: 806 EKDNFELKASSIRMEELEIQDVQFLH-GCQNPTIICIHQDVNGRHVKTHEISLKEK---- 860
K ++ +R+ E++++ FL+ + P + ++QD +VK + +
Sbjct: 148 GKTDYLENPEQVRISEMKVRASAFLYTDTKQPKLALLYQDAR-ENVKLATYRMLDDKGQL 206
Query: 861 --EFTKTPWKQDNIE---MEASLVIPVPEP-------------------LGGAIIIGQES 896
+F ++++++ + A +IPVP+ LGG +++G+
Sbjct: 207 ILQFDPKKNRENDVDDLCVGAMHIIPVPKARDEASKRYIVRNATTAKANLGGLVVLGETK 266
Query: 897 ILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGER-YLLGDLAGRLFMLLL 945
Y +S V + ++ + +D ER YLLGD G L++L +
Sbjct: 267 FTYLDDESKAIVEYALDEAVLWAAWEPID---ERTYLLGDDYGFLYILTI 313
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 94/174 (54%), Gaps = 10/174 (5%)
Query: 1045 FVLGTAVVHPEENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINST 1103
F++GT+ +H EE + GR++IF + D IA +KG+C + +GK++A++N T
Sbjct: 833 FLVGTSFLHEEEANVR-GRLLIFGVNADRAPYMIASHNLKGSCRCIGVLDGKIVAALNKT 891
Query: 1104 VRLFEW----TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT----ME 1155
V ++++ + L+ ++ + + + + + I V D+M+S+ L++Y +
Sbjct: 892 VVMYDYEETSSTSATLKKLATYRCSTCPIDIDITDNIIAVADIMKSIALVEYTPGADGLP 951
Query: 1156 GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
EE++R + TS+ +D + +L ++ NL + +++ + ED+T ++
Sbjct: 952 DKLEEVARHAQQVFSTSVAEVDTDTYLETDHDGNLILLKRNREGVTREDKTRME 1005
>gi|70992271|ref|XP_750984.1| UV-damaged DNA binding protein [Aspergillus fumigatus Af293]
gi|66848617|gb|EAL88946.1| UV-damaged DNA binding protein, putative [Aspergillus fumigatus
Af293]
gi|159124553|gb|EDP49671.1| UV-damaged DNA binding protein, putative [Aspergillus fumigatus
A1163]
Length = 1140
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 161/520 (30%), Positives = 269/520 (51%), Gaps = 43/520 (8%)
Query: 72 GSLWNGW----SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
+++ W S+R+LL D GRLF L+L +D V+ K++ LG S L Y
Sbjct: 284 ATIFVAWEQVDSQRWLLADDYGRLFFLML----VLDSDSQVESWKLDHLGNTSRASVLVY 339
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ- 181
L G++F+GS GDSQ+++++ P E V+++ +N+API+D ++DL E Q
Sbjct: 340 LGGGILFLGSHQGDSQVLRISNGPLE------VVQTLSNIAPILDFTIMDLGNRSSESQT 393
Query: 182 -----GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNT 235
GQ ++VT SG F +G+LR +R+G+G+EE + D+ I +W L +GS + +T
Sbjct: 394 HEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGDMDHITDLWGLQVGSSGDFLDT 453
Query: 236 LVLSFVGHTRVLTLSG-AEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
L+++FV TRV S EVEE + G + + T N+ +LQVT ++ E
Sbjct: 454 LLVTFVDETRVFRFSSDGEVEEMDHFLGLSLSESTLLATNLPGGRILQVTEQRVLIAEIE 513
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLD 353
+ W PPN I+ S N + ++ G ++ + +E++ + + +
Sbjct: 514 GGMVIYEWTPPNQFIITAASANDDSIVLVAGGELVTVLNITNEVQVVTQKDFGAD----- 568
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT- 410
S +S S P +A +S +L L L E+ +G GE PRS+L+
Sbjct: 569 -SQISGVTVPSSPTGVCIAGFPQLAKVS--VLKLQDLSELHTTSVGMAGEAFPRSVLVAN 625
Query: 411 -CFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFAC 468
+ L V++ DGS+ +S + + LT K+ LG+ QPT K R NVFA
Sbjct: 626 VLTDSPPTLFVSMADGSVITYSFNTNNFSLTGMTKLILGSEQPTFKKLPRGSGLFNVFAT 685
Query: 469 SDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHI 528
+ P++IY S ++++S VN + +C N+E+YP+S+A+AT +D+ + I
Sbjct: 686 CENPSMIYGSEGRIIYSAVNSEGASRICHFNSEAYPESIAVATSHDLKIALVDKERTTQI 745
Query: 529 RTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVR 568
+T+P+G RR+AY S + FG+ T I+ + DG+ V+
Sbjct: 746 QTLPIGATVRRVAYSPSEKAFGIGT--IERKLVDGTEIVK 783
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 41/317 (12%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-KDLLFIITQRYNAMIL 749
LVVAK+NR+E ++ TP+GL V +Y ++ ++ P + D LF+ T RY L
Sbjct: 29 LVVAKSNRLEFYSPTPDGLDLVASCAIYARVTMLARLPAPANSPTDHLFVGTDRYTYFTL 88
Query: 750 ECRGDIDNLEILT-KAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
D + T + + ++SD + S+ G +IDP R + L +Y G+ +IP+ +
Sbjct: 89 SW--DSSEKRVRTERDYVDMSDPSSRESQTGNRCLIDPSGRFMTLEIYEGVIAVIPIIQL 146
Query: 809 NFELKASSI--------------------RMEELEIQDVQFLHGCQN-PTIICIHQDVNG 847
+ + ++ R+EEL ++ FLH + P + +++D
Sbjct: 147 PSKKRGRAVALPSGPDAPRVGELGEPTTARIEELFVRSSAFLHVQEGLPRLALLYEDNQK 206
Query: 848 R----------HVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESI 897
+ H T S + F + ++E+ +S +IPVP PLGG +I+G+ SI
Sbjct: 207 KVRLRVRELQYHAATGSNSTADATFGEPADFTQDLELGSSHLIPVPAPLGGLLILGEMSI 266
Query: 898 LYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSV 957
Y + ++ + +++ V + +VD+ +R+LL D GRLF L+L +D V
Sbjct: 267 KYVDADNNEIISRPLDEATIFVAWEQVDS--QRWLLADDYGRLFFLML----VLDSDSQV 320
Query: 958 KEPKVELLGEHCKGPVV 974
+ K++ LG + V+
Sbjct: 321 ESWKLDHLGNTSRASVL 337
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 123/233 (52%), Gaps = 17/233 (7%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF--GEDPNTY------FVLGTAVV 1052
E+ ++ D+ F L A +L P E S+I ++F G+ N F++GTA +
Sbjct: 780 EIVKSRFVLADEILFRRLDAFELRPEELVESVIRAEFPAGKGANDRDEVKDRFIVGTAYL 839
Query: 1053 HPEENEPKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTN 1111
E +E +GRI+IF D+G KL Q+AE +KGAC ++ K++A++ TV +++ N
Sbjct: 840 DDEGDESIRGRILIFEVDNGRKLTQVAELPVKGACRALAMLGDKIVAALVKTVVVYKVIN 899
Query: 1112 EK--ELRLE--CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEISR 1163
+RLE S+ + + + V G+ I V DLM+S+ L++YK E + E++R
Sbjct: 900 NNFGAMRLEKLASYRTSTAPVDVTVTGNLIAVSDLMKSMCLVEYKEGENGTPDTMTEVAR 959
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+ W T + + + FL ++ NL + +++ ++D+ L+ G + L
Sbjct: 960 HFQTVWATGVANIAPDTFLESDAEGNLIVLHRNTTGVEEDDKRRLEVTGEISL 1012
Score = 48.1 bits (113), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+G+LR +R+G+G+EE + D+ I +W L +GS + +TL+++FV TRV S
Sbjct: 412 DGTLRSVRSGVGMEELGVLGDMDHITDLWGLQVGSSGDFLDTLLVTFVDETRVFRFS 468
>gi|169611218|ref|XP_001799027.1| hypothetical protein SNOG_08717 [Phaeosphaeria nodorum SN15]
gi|160702249|gb|EAT83885.2| hypothetical protein SNOG_08717 [Phaeosphaeria nodorum SN15]
Length = 1140
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 267/511 (52%), Gaps = 52/511 (10%)
Query: 72 GSLWNGW----SERYLLGDLAGRL--FMLLLEKEEKMDGTFSVKEPKVELLGEISIPECL 125
+++ W ++R++L D GRL FML+L++++K V+ K++++G+ S L
Sbjct: 293 ATIFVAWERIDAQRFVLADDYGRLYLFMLILDEKKK------VQSWKLDIIGQTSRASVL 346
Query: 126 TYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-ERQGQG 184
YLD G VFVGS GDSQ++++ E ++++F N+AP++D ++D+ R G+G
Sbjct: 347 VYLDAGYVFVGSHQGDSQVIRITEQSME------IVQTFANIAPVLDFTIMDMGNRSGEG 400
Query: 185 Q----------LVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLD 233
Q +VT SG +++GSLR +R+G+G+E+ + ++ I ++ L +
Sbjct: 401 QTNEYSSGQARIVTGSGAYQDGSLRSVRSGVGLEDLGVLGEMEHISDLFGLKSNASAEYA 460
Query: 234 NTLVLSFVGHTRVLTLS-GAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
+TL+++FV TR+ EVEE E D+ T N+ V+QVT +
Sbjct: 461 DTLLVTFVNETRIFRFDPQGEVEEVDEFASVALDETTLAAANISQGRVVQVTGGRVRVSD 520
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCATG-CDVYYLEVHGSEIKQLAHRALEYEVA 350
+ S W PP+G++I+ S N + VL + G V L + G ++ +E +VA
Sbjct: 521 LDGGMITSEWVPPSGETITAASVNDSHVLLSLGGVSVITLNMDGLKVLTEKKFGVESQVA 580
Query: 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMT 410
C+ + S + + +G W + + SL +LE V + + +PRS+L+T
Sbjct: 581 CIALPSTS----------SSMCFIGFWKNSQLAICSLDTLEAVKTVQVSEDSVPRSLLLT 630
Query: 411 CF--EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN---- 464
+ L A+ DG++ +S D ++G L+ +K + LGT+ TFR+L N
Sbjct: 631 QIFPDQPPTLFAAMADGNVVTYSFDTSNGELSGRKSIVLGTREA---TFRALPRGNGLFN 687
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
VFA + P++IY+S +LV+S V +C ++E+YP S+A+AT +D +
Sbjct: 688 VFATCEHPSLIYASEGRLVYSAVTAENATTVCPFDSEAYPGSVAIATSDDLRIALVDTER 747
Query: 525 KLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
H++T+ + E RRIAY + FG+ T +
Sbjct: 748 TTHVQTLKVDETVRRIAYSPGLKAFGLGTVK 778
Score = 103 bits (257), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 156/324 (48%), Gaps = 28/324 (8%)
Query: 682 IITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 741
++ R+D N +K NR+E +T T +GL + +YGK+ +++ R D LF+ T
Sbjct: 44 VVDGRSDANKQNSKANRLEFYTQTADGLALQHQKSIYGKVTMLQKLRPALSPTDHLFVGT 103
Query: 742 QRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFK 801
R+ L + L+ K+ +V+D + S+ G +DP R + + +Y G+
Sbjct: 104 DRFMYFTLSWNAEKKQLQT-EKSFDSVADNAARESQTGERCHVDPSGRFMTVEVYEGIIT 162
Query: 802 IIPL---------EKDNFEL-KASSIRMEELEIQDVQFLHGC---QNPTIICIHQDVNGR 848
+IPL E D L + +R+ E+ ++ FL P I + +D + +
Sbjct: 163 VIPLVQRGKKRKQEPDIAHLGEPQPVRLPEMFVRSSAFLRPKAFDDKPKIALLFEDTHSQ 222
Query: 849 -HVKTHEISLK---EKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKS 904
++ EI E + +E+ AS +IP+ P G I+IG+ SI Y+ +S
Sbjct: 223 VKLRLREILFAGGDSVELEDGEACRAELELGASHLIPIEAPSHGLIVIGETSIAYYDEES 282
Query: 905 YVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGR--LFMLLLEKEEKMDGTFSVKEPKV 962
+ +++ V + ++DA +R++L D GR LFML+L++++K V+ K+
Sbjct: 283 NDLQTEPLDEATIFVAWERIDA--QRFVLADDYGRLYLFMLILDEKKK------VQSWKL 334
Query: 963 ELLGEHCKGPVVEMSSLSYIKPGS 986
+++G+ + V+ Y+ GS
Sbjct: 335 DIIGQTSRASVLVYLDAGYVFVGS 358
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 116/237 (48%), Gaps = 13/237 (5%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPN---TYFVLGTAVVHPEEN 1057
E+ + + ++D+ F+ L + L E ++ + FV+GTA + + +
Sbjct: 786 EIMLSHFKLVDEIQFKELDTYALNEEELVECVMRCDLADGSGGTAERFVIGTAYLDDQNS 845
Query: 1058 EPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFE---WTNEK 1113
++GRI+I + L+ + E +KG C + GK++A++ T+ +++ T K
Sbjct: 846 TVERGRILILEVTPERVLKLVTEIAVKGGCRCLAMCEGKIVAALIKTIVVYDIEYRTQSK 905
Query: 1114 ELRLECSHFNNIIA-LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFE----EISRDYNPN 1168
++ + F A + + V G I + DLM+S+ +++Y+ E E++R +
Sbjct: 906 PDLVKAATFRCSTAPIDITVNGTQIAIADLMKSMVVVEYQRGETGLPDKLVEVARHFQVT 965
Query: 1169 WMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLVQCR 1225
W T++ +D+ +L ++ NL + +D +D+D+ L V + L+G+ + + R
Sbjct: 966 WATAVAEVDENTYLESDAEGNLLVLYRDPKGVTDDDKRRLN-VSSEMLLGEMVNRIR 1021
>gi|452003044|gb|EMD95501.1| hypothetical protein COCHEDRAFT_1165632 [Cochliobolus
heterostrophus C5]
Length = 1116
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 156/510 (30%), Positives = 264/510 (51%), Gaps = 49/510 (9%)
Query: 72 GSLWNGW----SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
+++ W ++R++L D GRL+M +L ++ V+ K++++G+ S L Y
Sbjct: 268 ATIFVAWERIDAQRFVLADDYGRLYMFML----VLNAQGRVQSWKLDVIGQTSRASTLVY 323
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-ERQGQGQ- 185
LD G VFVGS GDSQ++++ E ++++F+N+API+D ++D+ R G+GQ
Sbjct: 324 LDAGYVFVGSHQGDSQVIRIAEKSME------IVQTFSNIAPILDFTIMDMGNRSGEGQT 377
Query: 186 ---------LVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNT 235
+VT SG +++GSLR +R+G+G+E+ + ++ I ++ L +T
Sbjct: 378 NEYSSGQARIVTGSGAYQDGSLRSVRSGVGLEDLGVLGEMEHISELFCLRSAPSAQYTDT 437
Query: 236 LVLSFVGHTRVLTL-SGAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
L++SFVG +RV S EVEE E D+ T N+ ++QVT A + +
Sbjct: 438 LLVSFVGESRVFRFDSQGEVEEVDEFVSLALDETTLAAANIPQGRIVQVTNGRARICDLD 497
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCATG--CDVYYLEVHGSEIKQLAHRALEYEVAC 351
S W P +GK+I+ S N VL + G V G ++ + E +VAC
Sbjct: 498 GGMMTSEWVPADGKTITAASVNATHVLVSLGGVTIVSLSMADGLQVVKEKTFGAESQVAC 557
Query: 352 LDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTC 411
+ + P T VG W + + SL +LE V + + +PRS+L+T
Sbjct: 558 VTV-PSGTSST---------CFVGFWNNSQLAICSLDTLEAVKTVQISDDSVPRSLLLTQ 607
Query: 412 F--EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTT----NV 465
+ L VAL DG++ ++ DP++ L+ +K + LGT+ TFR+L NV
Sbjct: 608 IFPDQPPSLFVALADGNVVTYTFDPSNHELSGRKSIVLGTREA---TFRALPRGDGLFNV 664
Query: 466 FACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQK 525
FA + P++IY+S +LV+S V + +C ++E+YP S+A+AT +D +
Sbjct: 665 FATCEHPSLIYASEGRLVYSAVTAEKATTVCPFDSEAYPSSVAIATSQDLRIALVDTERT 724
Query: 526 LHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
H++T+ + E RRIAY S + FG+ T +
Sbjct: 725 THVQTLKVDETVRRIAYSPSLKAFGLGTIK 754
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 161/335 (48%), Gaps = 36/335 (10%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILE 750
LVVAK+NR+E +T +GL +YGK+ +++ R D LFI T R+ L
Sbjct: 29 LVVAKSNRLEFYTHEADGLILRHSKAIYGKVTMLQKLRPALSPTDHLFIGTDRFMYFTLS 88
Query: 751 CRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNF 810
+ L+ K+ +V+D + S+ G IDP R + + +Y G+ +IPL +
Sbjct: 89 WNAEKKQLQT-EKSFASVADNAARESQTGERCHIDPTGRFMTIEVYEGILTVIPLVQRGK 147
Query: 811 ELKASS----------IRMEELEIQDVQFLH---GCQNPTIICIHQDVNGRHVKTH---- 853
+ K + +R+ E+ ++ FL P + +++D + + VK
Sbjct: 148 KRKQEADIAHLGDPQPVRLPEMFVRSSAFLRPRSTDDKPKMALLYEDTHAQ-VKLRLREL 206
Query: 854 -----EISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAV 908
E+ L+E E K+ +E+ +S +IP+ EP G ++IG+ SI Y +S
Sbjct: 207 TYVGDEVDLQEGEACKS-----ELELGSSHLIPLEEPSHGLVVIGETSIGYFDDESGDLQ 261
Query: 909 APQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEH 968
+ +++ V + ++DA +R++L D GRL+M +L ++ V+ K++++G+
Sbjct: 262 TEPLDEATIFVAWERIDA--QRFVLADDYGRLYMFML----VLNAQGRVQSWKLDVIGQT 315
Query: 969 CKGPVVEMSSLSYIKPGSTK-QSTANQPADFNMEV 1002
+ + Y+ GS + S + A+ +ME+
Sbjct: 316 SRASTLVYLDAGYVFVGSHQGDSQVIRIAEKSMEI 350
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 95/190 (50%), Gaps = 10/190 (5%)
Query: 1045 FVLGTAVVHPEENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINST 1103
FV+GTA V + ++GRII+ + L+ + E +KG C + GK++A++ T
Sbjct: 809 FVVGTAYVDDQNTTSERGRIIVLEVTPERILKLVTEIAVKGGCRCLAICQGKIVAALIKT 868
Query: 1104 VRLFEWT----NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFE 1159
+ ++++ + +L S + + + V G I + DLM+SL +++Y E
Sbjct: 869 IVVYDFEYRAPSTPDLVKLASFRCSTAPIDVTVNGSLIAIADLMKSLVIVEYTKGETGLP 928
Query: 1160 ----EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVH 1215
E++R Y W T++ +D +L ++ NL + +D +D+D+ L + +
Sbjct: 929 DKLVEVARHYQITWATAVAEVDTNTYLESDAEGNLVVLYRDPNGVTDDDKRRLN-ISSEM 987
Query: 1216 LVGDGLVQCR 1225
L+G+ + + R
Sbjct: 988 LLGEMVNRIR 997
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 619 QNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKD 678
++ + NF + D LVVAK+NR+E +T +GL +YGK+ +++ R D
Sbjct: 14 RHALKLNFLAPEDDCLVVAKSNRLEFYTHEADGLILRHSKAIYGKVTMLQKLRPALSPTD 73
Query: 679 LLFIITQR 686
LFI T R
Sbjct: 74 HLFIGTDR 81
>gi|325094412|gb|EGC47722.1| DNA damage-binding protein 1a [Ajellomyces capsulatus H88]
Length = 1201
Score = 237 bits (605), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 158/502 (31%), Positives = 258/502 (51%), Gaps = 38/502 (7%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRLF L+L +D +V+ K++LLG+I L Y+ G+ F+GS
Sbjct: 349 QRWLLADDYGRLFFLML----VLDTDNAVQSWKLDLLGDIPRASVLVYMGGGITFIGSHQ 404
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL------ERQ------GQGQLV 187
GDS+L+++ E V+++F N+API+D ++DL E Q GQ ++V
Sbjct: 405 GDSELIRITEGSFE------VIQTFANIAPILDFTIMDLGGRAIGESQTHEFSSGQARIV 458
Query: 188 TCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRV 246
T SG F +GSLR +R+G+G+EE + + I +WAL + P+ +TL++SFV TRV
Sbjct: 459 TGSGAFNDGSLRSVRSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLLVSFVDETRV 518
Query: 247 LTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
+ EVEE E G + T N+ +LQVT + + + W P
Sbjct: 519 FYFTPDGEVEEKEEFMGLGLAESTLLAANLPHGRILQVTEWNVRVAELDGGMVIWEWSPE 578
Query: 305 NGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSS 364
K+I+ S N + V+ G V + +I + + + +S ++
Sbjct: 579 QQKAITAASSNDDHVVLMVGGQVLMIFDISGDINITGEKDFGVD------TQVSGVTVTT 632
Query: 365 EPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMTCF--EGHCYLLV 420
PA+A + + ++ ++SLP L LG G+ +PRS+L+ L V
Sbjct: 633 SPARACILCLPQTAEVV--VMSLPDLAIRRSTSLGEPGDAVPRSVLVAEVLPNNPATLFV 690
Query: 421 ALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
++ DGS+F FS + LT K+TLG+ QP+ K R NVFA ++P++IY+
Sbjct: 691 SMADGSVFSFSFNSEDFSLTSMSKLTLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYAVE 750
Query: 480 HKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRR 539
++V+S VN Q + +C N+E+YP S+ALAT S +D + I+T+ +GE RR
Sbjct: 751 GRIVYSAVNSDQASRICHFNSEAYPGSIALATPSELKITLVDAERTTQIQTLEVGETVRR 810
Query: 540 IAYQESSQTFGVITTRIDIQEA 561
+AY + FG+ T + +++
Sbjct: 811 VAYSAPERAFGIGTIKRTLEDG 832
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 158/369 (42%), Gaps = 92/369 (24%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KFFRGPTD----------------- 732
LVVAK+NR+E ++ TP+GL +YGK+ ++ K R P
Sbjct: 29 LVVAKSNRLEFYSQTPDGLSLEYSKAIYGKVTMLAKLSRPPLPSKPPPQPQSLDHQLPLQ 88
Query: 733 ------KKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDP 786
+ D+LFI T R + + NL K + +++D + S+ G +IDP
Sbjct: 89 PAPFRPQTDILFIGTDRASYFTVSWDQKTKNLRTERK-YVDLADPSARASQLGDRCLIDP 147
Query: 787 EARVIGLRLYNGLFKIIPLEK-----------------------------------DNFE 811
R + L LY G+ +IP+ + + E
Sbjct: 148 SGRFLTLELYEGIVTVIPIGQPLRSRGSGRRLGKRAANASASAAYANQDAAAGAAAADLE 207
Query: 812 L-KASSIRMEELEIQDVQFLHGCQN--PTIICIHQDVNGR-HVKTHEISLKEKEFTKTPW 867
L + R+EEL ++ FLH + P + +++D G+ +K E+ +
Sbjct: 208 LGEPCQARVEELLVRSSTFLHTQADTLPRMALLYEDTMGKVRLKVRELEVMHGGMGMGGG 267
Query: 868 K----------------------QDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSY 905
++ +EM AS ++PVP PLGG +++G+ SI Y S
Sbjct: 268 TGSGGGIGADGGIVAVLKGLDLLKEELEMGASFLVPVPAPLGGLLVLGETSIRYLDDASN 327
Query: 906 VAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELL 965
++ + +++ V + +VD G+R+LL D GRLF L+L +D +V+ K++LL
Sbjct: 328 ECISQPLKEATIFVAWEQVD--GQRWLLADDYGRLFFLML----VLDTDNAVQSWKLDLL 381
Query: 966 GEHCKGPVV 974
G+ + V+
Sbjct: 382 GDIPRASVL 390
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 121/242 (50%), Gaps = 18/242 (7%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF----GEDPNTYF----VLGTAVV 1052
EV ++ D+ F L + L E S+I ++F G + N F V+GT+ +
Sbjct: 834 EVIASRFMLADEIMFRELDIYDLNKDELVESVIRAQFPDGIGSEGNDLFKDLFVVGTSYL 893
Query: 1053 HPEENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTN 1111
+GRI+ F + +L ++AE +KGAC ++ K++A++ TV ++ +
Sbjct: 894 DDFGEGSIRGRILAFEVTANRQLAKVAEMPVKGACRALAIVQDKIVAALMKTVVVYTLSK 953
Query: 1112 ----EKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT----MEGSFEEISR 1163
+ L S+ + + + V G+ I V DLM+S+++++Y+ + S E++R
Sbjct: 954 GQFADYTLSKTASYRTSTAPVDIAVTGNLIAVADLMKSVSIVEYQQGANGLPDSLTEVAR 1013
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLVQ 1223
+ W T++ + ++ +L ++ NL + ++ +D+DR L EV + L+G+ + +
Sbjct: 1014 HFQTLWSTAVAPVAEDTWLESDAEGNLVMLHRNVNGVTDDDRRRL-EVTSEILLGEMVNR 1072
Query: 1224 CR 1225
R
Sbjct: 1073 IR 1074
Score = 48.5 bits (114), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR +R+G+G+EE + + I +WAL + P+ +TL++SFV TRV +
Sbjct: 466 DGSLRSVRSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLLVSFVDETRVFYFT 522
>gi|407923753|gb|EKG16818.1| Cleavage/polyadenylation specificity factor A subunit [Macrophomina
phaseolina MS6]
Length = 1129
Score = 237 bits (604), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 260/510 (50%), Gaps = 48/510 (9%)
Query: 73 SLWNGW----SERYLLGDLAG--RLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLT 126
+++ W ++R+LL D G LFMLLL+ D + V+ +++ +GE S L
Sbjct: 276 TIFVAWEQIDNQRFLLADDFGGLYLFMLLLD-----DNSGVVEGWRLDKIGETSRASVLV 330
Query: 127 YLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-ERQGQGQ 185
YLD G VFVGS GDSQ++++ + V+++F N+API+D ++D+ R G+GQ
Sbjct: 331 YLDAGHVFVGSHEGDSQVIRITEGS------IEVVQTFHNIAPILDFTIMDMGNRSGEGQ 384
Query: 186 ----------LVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDN 234
+VT SG FK+GSLR +R+G+G+E+ I DL I I+A S + D+
Sbjct: 385 SNEYSSGQARIVTGSGAFKDGSLRSVRSGVGLEDQGAIGDLGSISNIFAFSSTASGEYDD 444
Query: 235 TLVLSFVGHTRVLTLSG-AEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
TL++S V +R+ + E++E E G D+ T NV +LQVT A ++
Sbjct: 445 TLLVSLVNESRIFCVDADGELDERESFKGLQLDESTLMTKNVPNYRLLQVTQFAVRIMDL 504
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRAL--EYEVA 350
E+ VS W P G+ I+ V N ++ + G + I +A + + +++
Sbjct: 505 ENDMVVSEWHAPEGQVITDVDSNDRFIILSIGGVRAIILSIADTIHAVAEKDFGADSQIS 564
Query: 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSIL 408
C+ + A + VG W + + +L L L+ + L G +PRS+L
Sbjct: 565 CVAMPQ----------AADNICFVGFWQNCTVAILGLDGLQTIQTISLSEDGSSVPRSLL 614
Query: 409 MTCFEGHC--YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSLSTTNV 465
+T + L +A DG + FS+DP++ L+ +K LGTQ + R NV
Sbjct: 615 LTQIFANQPPTLFIATADGYVVTFSMDPSTFALSGRKSTVLGTQQANFRALPRGNGLYNV 674
Query: 466 FACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQK 525
FA + P++IY S +LVFS V + +C NAE+YP S+A+A +DE ++
Sbjct: 675 FATCEHPSLIYGSEGRLVFSAVTAEKATCVCPFNAEAYPRSIAIAASGELHLAVVDEERR 734
Query: 526 LHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
H++T+ + E RRIAY + FG+ T +
Sbjct: 735 THVQTLHVNETVRRIAYSPQLKAFGLGTIK 764
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 158/325 (48%), Gaps = 39/325 (12%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+LVVAK+NR+E++ + +GL +YGK+ ++ R + + LF+ T RY +
Sbjct: 28 SLVVAKSNRLELYVQSVDGLILHHAQAVYGKVTMLNRLRPMNEPTEHLFVGTDRYYYFTM 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPL---- 805
+ L+ + K + +++D+ + ++ G +++DP R + L LY G+ ++PL
Sbjct: 88 AWSPEEKQLKTV-KTYQDLADKAARDAQTGDRSLLDPTGRFMTLELYEGIVTVVPLTEKG 146
Query: 806 -EKDNFELKA----SSIRMEELEIQDVQFLHG----CQNPTIICIHQDVNGRHVKTHEIS 856
K + E+ A R+EE+ ++ FLH + P + ++++ ++ +
Sbjct: 147 KRKGDPEVSALGEPVPSRIEEMFVRSSAFLHRKSPESEKPLVALLYEEDEDSKIR---LR 203
Query: 857 LKEKEFTKTPWKQDNI-------------EMEASLVIPVPEPLGGAIIIGQESILYHSGK 903
L++ F ++ ++ ++ AS +IPVP P G +++G+ I Y +
Sbjct: 204 LRQLAFQTAGTEEQSVAALEPVEGLKEELDLGASHLIPVPGPCYGVLVLGETCITYFNDY 263
Query: 904 SYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAG--RLFMLLLEKEEKMDGTFSVKEPK 961
+ V + S+ V + ++D +R+LL D G LFMLLL+ D + V+ +
Sbjct: 264 TKALVKKPLQDSTIFVAWEQID--NQRFLLADDFGGLYLFMLLLD-----DNSGVVEGWR 316
Query: 962 VELLGEHCKGPVVEMSSLSYIKPGS 986
++ +GE + V+ ++ GS
Sbjct: 317 LDKIGETSRASVLVYLDAGHVFVGS 341
Score = 80.1 bits (196), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 105/191 (54%), Gaps = 11/191 (5%)
Query: 1045 FVLGTA-VVHPEENEPKQGRIIIFHY-DDGKLQQIAEKEIKGACYSMCEFNGKLLASINS 1102
F++GT+ +V EE +GRI++F +D +L+ IAE KGAC + + K++A +
Sbjct: 819 FIVGTSHLVEEEEQGSTRGRILVFEVTEDRRLKVIAEISTKGACRCLAMVDNKIVAGLIK 878
Query: 1103 TVRL--FEWTNEKE--LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS- 1157
TV + FE++ L + S + + + V G+ I V DL++S+++L+YK G
Sbjct: 879 TVVIYSFEYSTPSTPFLVKKASFRTSTAPIDITVTGNQIAVADLIKSVSVLEYKPGAGDQ 938
Query: 1158 ---FEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTV 1214
+E++R +W ++ +D+ +L A+ NL + ++D + ++EDR L G +
Sbjct: 939 SDELKEVARHVQVSWSMALAEVDENTYLQADAEGNLILLERDVSGVTEEDRKRLMLRGDM 998
Query: 1215 HLVGDGLVQCR 1225
L+G+ + + R
Sbjct: 999 -LLGEQVNRIR 1008
Score = 43.9 bits (102), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSG 57
+GSLR +R+G+G+E+ I DL I I+A S + D+TL++S V +R+ +
Sbjct: 404 DGSLRSVRSGVGLEDQGAIGDLGSISNIFAFSSTASGEYDDTLLVSLVNESRIFCVDA 461
>gi|261193401|ref|XP_002623106.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588711|gb|EEQ71354.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis SLH14081]
Length = 1168
Score = 236 bits (602), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 158/502 (31%), Positives = 259/502 (51%), Gaps = 38/502 (7%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRLF L+L +D +V+ K++ LG I L Y+ GV F+GS
Sbjct: 347 QRWLLADDYGRLFFLML----ILDSDNAVQSWKLDRLGNIPRASVLVYMGGGVTFIGSHQ 402
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL------ERQ------GQGQLV 187
GDSQL+++ G++ V+++F N+API+D ++DL E Q GQ ++V
Sbjct: 403 GDSQLIRIT-----EGSF-EVIQTFANIAPILDFTIMDLGGRAMGESQTHEFSSGQARIV 456
Query: 188 TCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRV 246
T SG F +GSLR +R+G+G+EE + + I +WAL + P+ +TL++SFV TRV
Sbjct: 457 TGSGAFNDGSLRSVRSGVGMEEVGVLGSMEHITDLWALRVACPEEFSDTLLVSFVDETRV 516
Query: 247 L--TLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
T G E+ E G + T N+ +LQVT + + + W P
Sbjct: 517 FYFTPDGGVEEKDEFMGLGLTESTLIAANLPNGRILQVTERNVRVAELDGGMVMWEWSPV 576
Query: 305 NGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSS 364
+ K+I+ S N + ++ G V + EIK + + + +S ++
Sbjct: 577 SQKAITAASSNDDHLVLMVGGQVLMIFDIRGEIKVAGEKDFGVD------TQVSGVTVTA 630
Query: 365 EPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMTCF--EGHCYLLV 420
PA++ + + ++ ++SL L LG G+ +PRS+L+ L V
Sbjct: 631 SPARSCILCLPQTAEVI--VMSLADLTIRHSTSLGEPGDAVPRSVLVAEVLPNNPATLFV 688
Query: 421 ALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
++ DGS+F FS + LT K+TLG+ QP+ K R NVFA ++P++IYS+
Sbjct: 689 SMADGSVFSFSFNATDFSLTSMSKITLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYSAE 748
Query: 480 HKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRR 539
++V+S VN Q + +C N+E+YP S+ALAT S +D + I+T+ +GE RR
Sbjct: 749 GRIVYSAVNSDQASRICHFNSEAYPASIALATPSELKIALVDAERTTQIQTLEVGETVRR 808
Query: 540 IAYQESSQTFGVITTRIDIQEA 561
+AY + FG+ T + +++
Sbjct: 809 VAYSAPERAFGIGTIKRTLEDG 830
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 157/367 (42%), Gaps = 90/367 (24%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KFFRGP-------------TDKK-- 734
LVVAK+NR+E ++ TP+GL +YGK+ ++ K R P D++
Sbjct: 29 LVVAKSNRLEFYSRTPDGLSLEHSKAIYGKVTMLAKLSRPPLPTQPQSQPEPQTPDQRPQ 88
Query: 735 ----------DLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAII 784
D+LF+ T R + NL K + +++D + S+ G +I
Sbjct: 89 LQPAPFRPQTDILFVGTDRSTYFTVSWDQKTKNLHTERK-YVDLADGSARESQLGDRCLI 147
Query: 785 DPEARVIGLRLYNGLFKIIP-------------LEKDNFELKASSI-------------- 817
DP R + L LY G+ +IP L K AS++
Sbjct: 148 DPSGRFLTLELYEGIVTVIPIGQPLRSRGSGRKLGKRAANASASTMQGNQDVGAADLELG 207
Query: 818 -----RMEELEIQDVQFLHGCQN--PTIICIHQDVNGR-HVKTHEISLKEKEFTKTPWK- 868
R+EEL ++ FLH + P + +++D G+ +K E+ +
Sbjct: 208 EPCQARVEELLVRSSTFLHTQADMLPRMALLYEDTMGKVRLKVRELEVTYGGMGIGSGSG 267
Query: 869 ---------------------QDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVA 907
++ +EM AS ++PVP PLGG +++G+ SI Y S
Sbjct: 268 GGSGVGADGGSAAVLKGLDMLKEELEMGASFLVPVPAPLGGLLVLGETSIRYLDDASNEC 327
Query: 908 VAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
++ + +++ V + +VD G+R+LL D GRLF L+L +D +V+ K++ LG
Sbjct: 328 ISQPLEEATIFVAWEQVD--GQRWLLADDYGRLFFLML----ILDSDNAVQSWKLDRLGN 381
Query: 968 HCKGPVV 974
+ V+
Sbjct: 382 IPRASVL 388
Score = 66.6 bits (161), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 110/233 (47%), Gaps = 31/233 (13%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
EV ++ D+ F L + L E S+I ++F +D ++ E E
Sbjct: 832 EVIASRFMLADEIMFRELDVYDLNKDELVESVIRAQFPDDKDS------------EGEEL 879
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTN----EKELR 1116
+ I +AE +KGAC ++ K++A++ TV ++ + + L
Sbjct: 880 MKDLFI----------VAEMPVKGACRALAIVQDKIVAALMKTVVVYTLSKGQFADYILT 929
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT----MEGSFEEISRDYNPNWMTS 1172
S+ + + + V G+ I V DLM+S+++++Y+ + GS E++R + W T+
Sbjct: 930 KTASYRTSTAPIDIAVTGNLIAVADLMKSVSIVEYQQGTDGLSGSLTEVARHFQTLWSTA 989
Query: 1173 IEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLVQCR 1225
+ + + +L ++ NL + +++ +++DR L EV + L+G+ + + R
Sbjct: 990 VAPVAQDTWLESDAEGNLVVLRRNVNGVTEDDRRRL-EVTSEVLLGEMVNRIR 1041
Score = 48.5 bits (114), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 53
+GSLR +R+G+G+EE + + I +WAL + P+ +TL++SFV TRV
Sbjct: 464 DGSLRSVRSGVGMEEVGVLGSMEHITDLWALRVACPEEFSDTLLVSFVDETRVF 517
>gi|396465264|ref|XP_003837240.1| similar to DDB1B (Damaged DNA Binding Protein 1 B); damaged DNA
binding / protein binding [Leptosphaeria maculans JN3]
gi|312213798|emb|CBX93800.1| similar to DDB1B (Damaged DNA Binding Protein 1 B); damaged DNA
binding / protein binding [Leptosphaeria maculans JN3]
Length = 1089
Score = 236 bits (602), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 154/510 (30%), Positives = 264/510 (51%), Gaps = 49/510 (9%)
Query: 72 GSLWNGW----SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
+++ W ++R++L D GRL+M +L +D V+ K++++G+ S L Y
Sbjct: 209 ATIFVAWERIDAQRFVLADDYGRLYMFML----ILDARHKVRSWKLDIIGKTSRASVLVY 264
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-ERQGQGQ- 185
LD G VFVGS GDSQ++K+ E ++++F+N+API+D ++D+ R G+GQ
Sbjct: 265 LDAGYVFVGSHQGDSQVIKIAERSME------IVQTFSNIAPILDFTIMDMGNRSGEGQT 318
Query: 186 ---------LVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNT 235
+VT SG +++GSLR +R+G+G+E+ + ++ I +++L + +T
Sbjct: 319 NEYSSGQARIVTGSGAYQDGSLRSVRSGVGLEDLGVLGEMEHISNLFSLKSDATAQYADT 378
Query: 236 LVLSFVGHTRVLTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
L+++FV +RV EVEE E ++ T N+ V+QVT A + +
Sbjct: 379 LLVTFVNESRVFKFDPQGEVEEVEEFASLALEETTLVAANISQGRVVQVTSGRARICDLD 438
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCATG-CDVYYLEV-HGSEIKQLAHRALEYEVAC 351
VS W P ++I+ S N VL + G V L + G ++ Q E +VAC
Sbjct: 439 GGMIVSEWMPMGDQTITAASANDTHVLISLGGVTVVSLNMTDGLQVAQQKTFGTESQVAC 498
Query: 352 LDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTC 411
+ + S+ + +G W + + SL +LE + + E +PRS+L+T
Sbjct: 499 VALPSDSS----------SVCFLGFWMNSQLAICSLDTLETIKTVTISDESVPRSLLLTQ 548
Query: 412 F--EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL----STTNV 465
+ L A+ DG++ ++ DP+S L KK + LGT+ TFR+L NV
Sbjct: 549 VFPDQPPTLFAAMADGNVITYTFDPSSYELLGKKSIVLGTREA---TFRALPRGDGIYNV 605
Query: 466 FACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQK 525
FA + P++IY+S +LV+S V + +C ++E+YP S+A+AT +D +
Sbjct: 606 FATCEHPSLIYASEGRLVYSAVTAEKATAVCPFDSEAYPGSVAIATSEDLRIALVDTERT 665
Query: 526 LHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
H++T+ + E RRIAY S + FG+ T +
Sbjct: 666 THVQTLKVDETVRRIAYSPSLKAFGLGTIK 695
Score = 83.2 bits (204), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPN---TYFVLGTAVVHPEEN 1057
E+ + + ++D+ F+ L + L E ++ + + FV+GTA + +
Sbjct: 703 EIMLSHFKLVDEIQFKELDTYALNEEELVECVMRCELADGSGGLAERFVVGTAYLDDQNA 762
Query: 1058 EPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW---TNEK 1113
++GRI+I + L+ + E +KG C + GK++A++ T+ L++ T K
Sbjct: 763 TAERGRILILEVTPERVLKLVTELAVKGGCRCLAMCEGKIVAALIKTIVLYDVEFKTQSK 822
Query: 1114 ELRLECSHFNNIIA-LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFE----EISRDYNPN 1168
++ + F A + + V G I + DLM+SL +++Y+ EG E++R Y
Sbjct: 823 PTLVKAATFRCSTAPIDITVNGPVITIADLMKSLAMVKYQKGEGGLPDKLVELARHYQVT 882
Query: 1169 WMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHL 1208
W T++ +D E FL ++ NL + ++ +D+D+ H+
Sbjct: 883 WATAVAEIDTETFLESDAEGNLMVLSRNVEGVTDDDKRHM 922
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 138/291 (47%), Gaps = 28/291 (9%)
Query: 730 PTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEAR 789
PTD LF+ T R+ L D L+ K+ +V+D + S+ G +DP R
Sbjct: 11 PTDH---LFVGTDRFMYFTLSWDSDKKQLQT-EKSFASVADNAARESQTGERCHVDPTGR 66
Query: 790 VIGLRLYNGLFKIIPL---------EKDNFEL-KASSIRMEELEIQDVQFLHGCQ---NP 836
+ + +Y G+ +IPL E D L + +R+ E+ ++ FL P
Sbjct: 67 FMTVEVYEGIMTVIPLVQRGKKRKQEPDIAHLGEPQPVRLSEMFVRSSAFLRPRSFDDKP 126
Query: 837 TIICIHQDVNGR-HVKTHEISLK---EKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIII 892
I +++D + + +K E++ E + + +E+ +S +IP+ EP G I+I
Sbjct: 127 KIALLYEDSHSQVKLKLRELTFAGGDAVELEEGETCRAELELGSSHLIPLEEPTHGLIVI 186
Query: 893 GQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMD 952
+ SI Y+ +S + +++ V + ++DA +R++L D GRL+M +L +D
Sbjct: 187 AETSIGYYDDESGELQTEPLEEATIFVAWERIDA--QRFVLADDYGRLYMFML----ILD 240
Query: 953 GTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPGSTK-QSTANQPADFNMEV 1002
V+ K++++G+ + V+ Y+ GS + S + A+ +ME+
Sbjct: 241 ARHKVRSWKLDIIGKTSRASVLVYLDAGYVFVGSHQGDSQVIKIAERSMEI 291
>gi|239613967|gb|EEQ90954.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis ER-3]
gi|327353314|gb|EGE82171.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis ATCC
18188]
Length = 1199
Score = 236 bits (601), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 158/502 (31%), Positives = 259/502 (51%), Gaps = 38/502 (7%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRLF L+L +D +V+ K++ LG I L Y+ GV F+GS
Sbjct: 347 QRWLLADDYGRLFFLML----ILDSDNAVQSWKLDRLGNIPRASVLVYMGGGVTFIGSHQ 402
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL------ERQ------GQGQLV 187
GDSQL+++ G++ V+++F N+API+D ++DL E Q GQ ++V
Sbjct: 403 GDSQLIRIT-----EGSF-EVIQTFANIAPILDFTIMDLGGRAMGESQTHEFSSGQARIV 456
Query: 188 TCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRV 246
T SG F +GSLR +R+G+G+EE + + I +WAL + P+ +TL++SFV TRV
Sbjct: 457 TGSGAFNDGSLRSVRSGVGMEEVGVLGSMEHITDLWALRVACPEEFSDTLLVSFVDETRV 516
Query: 247 L--TLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
T G E+ E G + T N+ +LQVT + + + W P
Sbjct: 517 FYFTPDGGVEEKDEFMGLGLTESTLIAANLPNGRILQVTERNVRVAELDGGMVMWEWSPV 576
Query: 305 NGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSS 364
+ K+I+ S N + ++ G V + EIK + + + +S ++
Sbjct: 577 SQKAITAASSNDDHLVLMVGGQVLMIFDIRGEIKVAGEKDFGVD------TQVSGVTVTA 630
Query: 365 EPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMTCF--EGHCYLLV 420
PA++ + + ++ ++SL L LG G+ +PRS+L+ L V
Sbjct: 631 SPARSCILCLPQTAEVI--VMSLADLTIRHSTSLGEPGDAVPRSVLVAEVLPNNPATLFV 688
Query: 421 ALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
++ DGS+F FS + LT K+TLG+ QP+ K R NVFA ++P++IYS+
Sbjct: 689 SMADGSVFSFSFNATDFSLTSMSKITLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYSAE 748
Query: 480 HKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRR 539
++V+S VN Q + +C N+E+YP S+ALAT S +D + I+T+ +GE RR
Sbjct: 749 GRIVYSAVNSDQASRICHFNSEAYPASIALATPSELKIALVDAERTTQIQTLEVGETVRR 808
Query: 540 IAYQESSQTFGVITTRIDIQEA 561
+AY + FG+ T + +++
Sbjct: 809 VAYSAPERAFGIGTIKRTLEDG 830
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 157/367 (42%), Gaps = 90/367 (24%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KFFRGP-------------TDKK-- 734
LVVAK+NR+E ++ TP+GL +YGK+ ++ K R P D++
Sbjct: 29 LVVAKSNRLEFYSRTPDGLSLEHSKAIYGKVTMLAKLSRPPLPTQPQSQPEPQTPDQRPQ 88
Query: 735 ----------DLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAII 784
D+LF+ T R + NL K + +++D + S+ G +I
Sbjct: 89 LQPAPFRPQTDILFVGTDRSTYFTVSWDQKTKNLHTERK-YVDLADGSARESQLGDRCLI 147
Query: 785 DPEARVIGLRLYNGLFKIIP-------------LEKDNFELKASSI-------------- 817
DP R + L LY G+ +IP L K AS++
Sbjct: 148 DPSGRFLTLELYEGIVTVIPIGQPLRSRGSGRKLGKRAANASASTMQGNQDVGAADLELG 207
Query: 818 -----RMEELEIQDVQFLHGCQN--PTIICIHQDVNGR-HVKTHEISLKEKEFTKTPWK- 868
R+EEL ++ FLH + P + +++D G+ +K E+ +
Sbjct: 208 EPCQARVEELLVRSSTFLHTQADMLPRMALLYEDTMGKVRLKVRELEVTYGGMGIGSGSG 267
Query: 869 ---------------------QDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVA 907
++ +EM AS ++PVP PLGG +++G+ SI Y S
Sbjct: 268 GGSGVGADGGSAAVLKGLDMLKEELEMGASFLVPVPAPLGGLLVLGETSIRYLDDASNEC 327
Query: 908 VAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 967
++ + +++ V + +VD G+R+LL D GRLF L+L +D +V+ K++ LG
Sbjct: 328 ISQPLEEATIFVAWEQVD--GQRWLLADDYGRLFFLML----ILDSDNAVQSWKLDRLGN 381
Query: 968 HCKGPVV 974
+ V+
Sbjct: 382 IPRASVL 388
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 123/242 (50%), Gaps = 18/242 (7%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT--------YFVLGTAVV 1052
EV ++ D+ F L + L E S+I ++F +D ++ F++GT+ +
Sbjct: 832 EVIASRFMLADEIMFRELDVYDLNKDELVESVIRAQFPDDKDSEGEELMKDLFIVGTSYL 891
Query: 1053 HPEENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTN 1111
+GRI+ F + +L ++AE +KGAC ++ K++A++ TV ++ +
Sbjct: 892 DDFGEGSIRGRILAFEVTPNRQLGKVAEMPVKGACRALAIVQDKIVAALMKTVVVYTLSK 951
Query: 1112 ----EKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT----MEGSFEEISR 1163
+ L S+ + + + V G+ I V DLM+S+++++Y+ + GS E++R
Sbjct: 952 GQFADYILTKTASYRTSTAPIDIAVTGNLIAVADLMKSVSIVEYQQGTDGLSGSLTEVAR 1011
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLVQ 1223
+ W T++ + + +L ++ NL + +++ +++DR L EV + L+G+ + +
Sbjct: 1012 HFQTLWSTAVAPVAQDTWLESDAEGNLVVLRRNVNGVTEDDRRRL-EVTSEVLLGEMVNR 1070
Query: 1224 CR 1225
R
Sbjct: 1071 IR 1072
Score = 48.5 bits (114), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 53
+GSLR +R+G+G+EE + + I +WAL + P+ +TL++SFV TRV
Sbjct: 464 DGSLRSVRSGVGMEEVGVLGSMEHITDLWALRVACPEEFSDTLLVSFVDETRVF 517
>gi|225558618|gb|EEH06902.1| DNA damage-binding protein 1a [Ajellomyces capsulatus G186AR]
Length = 1201
Score = 236 bits (601), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 157/502 (31%), Positives = 258/502 (51%), Gaps = 38/502 (7%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRLF L+L +D +V+ K++LLG+I L Y+ G+ F+GS
Sbjct: 349 QRWLLADDYGRLFFLML----VLDTDNAVQSWKLDLLGDIPRASVLVYMGGGITFIGSHQ 404
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL------ERQ------GQGQLV 187
GDS+L+++ E V+++F N+API+D ++DL E Q GQ ++V
Sbjct: 405 GDSELIRITEGSFE------VIQTFANIAPILDFTIMDLGGRAIGESQTHEFSSGQARIV 458
Query: 188 TCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRV 246
T SG F +GSLR +R+G+G+EE + + I +WAL + P+ +TL++SFV TRV
Sbjct: 459 TGSGAFNDGSLRSVRSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLLVSFVDETRV 518
Query: 247 LTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
+ EVEE E G + T N+ +LQVT + + + W P
Sbjct: 519 FYFTPDGEVEEKEEFMGLGLAESTLLAANLPHGRILQVTEWNVRVAELDGGMVIWEWSPE 578
Query: 305 NGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSS 364
K+I+ S N + ++ G V + +I + + + +S ++
Sbjct: 579 QTKAITAASSNDDHLVLMVGGQVLMIFDISGDINITGEKDFGVD------TQVSGVTVTT 632
Query: 365 EPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMTCF--EGHCYLLV 420
PA+A + + ++ ++SLP L LG G+ +PRS+L+ L V
Sbjct: 633 SPARACILCLPQTAEVV--VMSLPDLAIRRSTSLGEPGDAVPRSVLVAEVLPNNPATLFV 690
Query: 421 ALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
++ DGS+F FS + LT K+TLG+ QP+ K R NVFA ++P++IY+
Sbjct: 691 SMADGSVFSFSFNSEDFSLTSMSKLTLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYAVE 750
Query: 480 HKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRR 539
++V+S VN Q + +C N+E+YP S+ALAT S +D + I+T+ +GE RR
Sbjct: 751 GRIVYSAVNSDQASRICHFNSEAYPGSIALATPSELKITLVDAERTTQIQTLEVGETVRR 810
Query: 540 IAYQESSQTFGVITTRIDIQEA 561
+AY + FG+ T + +++
Sbjct: 811 VAYSAPERAFGIGTIKRTLEDG 832
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 157/369 (42%), Gaps = 92/369 (24%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KFFRGPTD----------------- 732
LVVAK+NR+E ++ TP+G +YGK+ ++ K R P
Sbjct: 29 LVVAKSNRLEFYSQTPDGFSLEYSKAIYGKVTMLAKLSRPPLPSKPPPQPQSLDHQLPLQ 88
Query: 733 ------KKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDP 786
+ D+LFI T R + + NL K + +++D + S+ G +IDP
Sbjct: 89 PAPFRPQTDILFIGTDRASYFTVSWDQKTKNLRTERK-YVDLADPSARASQLGDRCLIDP 147
Query: 787 EARVIGLRLYNGLFKIIPLEK-----------------------------------DNFE 811
R + L LY G+ +IP+ + + E
Sbjct: 148 SGRFLTLELYEGIVTVIPIGQPLRSRGSGRRLGKRAANASASAAYANQDAAAGAAAADLE 207
Query: 812 L-KASSIRMEELEIQDVQFLHGCQN--PTIICIHQDVNGR-HVKTHEISLKEKEFTKTPW 867
L + R+EEL ++ FLH + P + +++D G+ +K E+ +
Sbjct: 208 LGEPCQARVEELLVRSSTFLHTQADTLPRMALLYEDTMGKVRLKVRELEVMHGGMGMGGG 267
Query: 868 K----------------------QDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSY 905
++ +EM AS ++PVP PLGG +++G+ SI Y S
Sbjct: 268 TGSGGGIGADGGIVAVLKGLDLLKEELEMGASFLVPVPAPLGGLLVLGETSIRYLDDASN 327
Query: 906 VAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELL 965
++ + +++ V + +VD G+R+LL D GRLF L+L +D +V+ K++LL
Sbjct: 328 ECISQPLKEATIFVAWEQVD--GQRWLLADDYGRLFFLML----VLDTDNAVQSWKLDLL 381
Query: 966 GEHCKGPVV 974
G+ + V+
Sbjct: 382 GDIPRASVL 390
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 114/233 (48%), Gaps = 17/233 (7%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT--------YFVLGTAVV 1052
EV ++ D+ F L + L E S+I ++F + ++ FV+GT+ +
Sbjct: 834 EVIASRFMLADEIMFRELDIYDLNKDELVESVIRAQFPDGIDSEGNDLFKDLFVVGTSYL 893
Query: 1053 HPEENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTN 1111
+GRI+ F + +L ++AE +KGAC ++ K++A++ TV ++ +
Sbjct: 894 DDFGEGSIRGRILAFEVTANRQLAKVAEMPVKGACRALAIVQDKIVAALMKTVVVYTLSK 953
Query: 1112 ----EKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT----MEGSFEEISR 1163
+ L S+ + + + V G+ I V DLM+S+++++Y+ + S E++R
Sbjct: 954 GQFADYTLSKTASYRTSTAPVDIAVTGNLIAVADLMKSVSIVEYQQGANGLPDSLTEVAR 1013
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+ W T++ + ++ +L ++ NL + ++ +D+DR L+ + L
Sbjct: 1014 HFQTLWSTAVAPVAEDTWLESDAEGNLVMLHRNVNGVTDDDRRRLEVTSEISL 1066
Score = 48.5 bits (114), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR +R+G+G+EE + + I +WAL + P+ +TL++SFV TRV +
Sbjct: 466 DGSLRSVRSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLLVSFVDETRVFYFT 522
>gi|402582698|gb|EJW76643.1| CPSF A subunit region family protein [Wuchereria bancrofti]
Length = 418
Score = 235 bits (600), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/258 (48%), Positives = 163/258 (63%), Gaps = 12/258 (4%)
Query: 368 KAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSM 427
++++ AVG WTD+S L +LP L EV +E + G+++ RSI+++ EGH YLLVALGDG++
Sbjct: 74 RSEICAVGYWTDLSVALRALPQLVEVVREKIAGDMLSRSIMLSPMEGHVYLLVALGDGTV 133
Query: 428 FYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTT--NVFACSDRPTVIYSSNHKLVFS 485
YF +D +G L D KK TLGTQP L+ FRS + N+F CSDRP VIYSSN KL+FS
Sbjct: 134 HYFQIDMKTGALLDPKKATLGTQPIHLRKFRSRCSPVHNIFVCSDRPAVIYSSNQKLLFS 193
Query: 486 NVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQES 545
NVNLR V+ M L AE+YPD+L L + G ID+IQKLHIRTVPLGE+P RIAYQ
Sbjct: 194 NVNLRMVSTMTPLYAEAYPDALVLTDGHSLVIGRIDDIQKLHIRTVPLGESPSRIAYQPE 253
Query: 546 SQTFGVITTRIDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADF 605
+ T VI R++ +A G AS A T+SS + P
Sbjct: 254 TNTIAVIVERLEFVDAMGKHHFGQCASKNAMETSSSR----------LSSMRREPTPECL 303
Query: 606 NMEVEVHNLLIIDQNTFE 623
E+EV ++L++D NTFE
Sbjct: 304 AEEMEVSSVLLLDSNTFE 321
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 2/135 (1%)
Query: 962 VELLGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAH 1021
V+ +G+H G +++ + P E+EV ++L++D NTFEILH+H
Sbjct: 267 VDAMGKHHFGQCASKNAMETSSSRLSSMRREPTPECLAEEMEVSSVLLLDSNTFEILHSH 326
Query: 1022 QLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDG--KLQQIAE 1079
+L E A+SL S + G D YFV+GTAV+ +E E K GRI++F +G +++ + E
Sbjct: 327 ELEGSEMAMSLTSCQLGNDSQPYFVVGTAVIMSDETESKMGRIMMFQASEGPERMRLVYE 386
Query: 1080 KEIKGACYSMCEFNG 1094
KEIKGA YS+ +G
Sbjct: 387 KEIKGAAYSIQSMDG 401
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 1029 ALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDG--KLQQIAEKEIKGAC 1086
A+SL S + G D YFV+GTAV+ +E E K GRI++F +G +++ + EKEIKGA
Sbjct: 2 AMSLTSCQLGNDSQPYFVVGTAVIMSDETESKMGRIMMFQASEGPERMRLVYEKEIKGAA 61
Query: 1087 YSMCEFNGK 1095
YS+ +GK
Sbjct: 62 YSIQSMDGK 70
>gi|189205943|ref|XP_001939306.1| DNA damage-binding protein 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975399|gb|EDU42025.1| DNA damage-binding protein 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1115
Score = 235 bits (600), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 154/510 (30%), Positives = 266/510 (52%), Gaps = 49/510 (9%)
Query: 72 GSLWNGW----SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
+++ W ++R++L D GRL+M +L + V+ K++++G+ S L Y
Sbjct: 268 ATIFVAWERIDAQRFVLADDYGRLYMFML----VLSAQGKVQSWKLDIIGQTSRASTLVY 323
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-ERQGQGQ- 185
LD G V+VGS GDSQ++K+ E ++++F+N+API+D ++D+ R G+GQ
Sbjct: 324 LDAGYVYVGSHQGDSQVIKIAEKSME------IVQTFSNIAPILDFTIMDMGNRSGEGQT 377
Query: 186 ---------LVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNT 235
+VT SG +++GSLR +R+G+G+E+ + ++ I +++L + +T
Sbjct: 378 NEYSSGQARIVTASGAYQDGSLRSVRSGVGLEDLGVLGEMEHISDLFSLKSTASAQYADT 437
Query: 236 LVLSFVGHTRVLTLS-GAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
L++SFV +R+ EVEE E D+ T N+ ++QVT A + +
Sbjct: 438 LLVSFVNESRIFRFDPQGEVEEVDEFASLALDETTLAAANISQGRIIQVTNGRARICDLD 497
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCATG--CDVYYLEVHGSEIKQLAHRALEYEVAC 351
S W P G +I+ S N++ VL + G V +G ++ + E +VAC
Sbjct: 498 GGMITSEWLPMGGPTITAASINESHVLVSLGGVTVVSISMANGLQVVKEKTFGAESQVAC 557
Query: 352 LDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMT- 410
+ + S+ + VG W + + SL +LE V + + +PRS+L+T
Sbjct: 558 IALPSDSS----------SICFVGFWNNSGLAICSLDTLEPVKTVQISDDSVPRSLLLTQ 607
Query: 411 CFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTT----NV 465
F G L VAL DG++ ++ DP++ L+ +K + LGT+ TFR+L NV
Sbjct: 608 IFPGQPPSLFVALADGNVVTYAFDPSTHELSGRKSIVLGTREA---TFRALPRGDGLFNV 664
Query: 466 FACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQK 525
FA + P++IYSS +LV+S V + +C ++E+YP S+A+AT +D +
Sbjct: 665 FATCEHPSLIYSSEGRLVYSAVTAEKATTVCPFDSEAYPGSVAIATPEDLRIALVDTERT 724
Query: 526 LHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
H++T+ + E RRIAY S + FG+ T +
Sbjct: 725 THVQTLKVDETVRRIAYSPSLKAFGLGTIK 754
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 163/329 (49%), Gaps = 24/329 (7%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILE 750
LVVAK+NR+E +T +GL +YGK+ +++ R D LF+ T R+ L
Sbjct: 29 LVVAKSNRLEFYTQESDGLALKHSKAIYGKVTMLQKLRPALSSTDHLFVGTDRFMYFTLS 88
Query: 751 CRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNF 810
+ L+ K+ +V+D + S+ G IDP R + + +Y G+ +IPL +
Sbjct: 89 WDAEKRQLQT-EKSFASVADNAARESQTGERCHIDPSGRFMTVEVYEGIITVIPLVQRGK 147
Query: 811 ELKASS----------IRMEELEIQDVQFLHGC---QNPTIICIHQDVNGR-HVKTHEIS 856
+ K + +R+ E+ I+ FL + P + +++D + + +K E++
Sbjct: 148 KRKQEADIAHLGEPQPVRLPEMFIRSSAFLRPRSPDEKPKMALLYEDTHSQVKLKLRELT 207
Query: 857 LK--EKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIK 914
E + + + ++E+ +S +IPV +P G ++IG+ SI Y+ +S + + +
Sbjct: 208 YAGDEVDLQEGEICESDLELGSSHLIPVEKPSHGLVVIGETSIGYYDDESGEIHSEPLDE 267
Query: 915 SSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVV 974
++ V + ++DA +R++L D GRL+M +L + V+ K++++G+ + +
Sbjct: 268 ATIFVAWERIDA--QRFVLADDYGRLYMFML----VLSAQGKVQSWKLDIIGQTSRASTL 321
Query: 975 EMSSLSYIKPGSTK-QSTANQPADFNMEV 1002
Y+ GS + S + A+ +ME+
Sbjct: 322 VYLDAGYVYVGSHQGDSQVIKIAEKSMEI 350
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
Query: 1045 FVLGTAVVHPEENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINST 1103
FV+GTA + + ++GRI+I + L+ + E +KG C + GK++A++ T
Sbjct: 809 FVIGTAYLDDQSTTSERGRILILEVTPERILKLVMEIAVKGGCRCLATCEGKIVAALIKT 868
Query: 1104 VRLF--EWTNEKELRLECSHFNNIIA-LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFE- 1159
+ ++ E+ + + + F A + + V G I++ DLM+SL +++Y E
Sbjct: 869 IVIYDVEYPTQTPFLTKLATFRCSTAPIDITVNGPKIVIADLMKSLVVVEYTKGEAGLPD 928
Query: 1160 ---EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
E++R Y W T++ +D ++L ++ NL + +D +D+D+ L V + L
Sbjct: 929 KLVEVARHYQITWATAVAEVDTNMYLESDAEGNLMVLYRDPNGVTDDDKRRLN-VSSEML 987
Query: 1217 VGDGLVQCR 1225
+G+ + + R
Sbjct: 988 LGEMVNRIR 996
Score = 40.4 bits (93), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 619 QNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKD 678
++ + +F S + LVVAK+NR+E +T +GL +YGK+ +++ R D
Sbjct: 14 RHALKLSFLSPDEDCLVVAKSNRLEFYTQESDGLALKHSKAIYGKVTMLQKLRPALSSTD 73
Query: 679 LLFIITQR 686
LF+ T R
Sbjct: 74 HLFVGTDR 81
>gi|226510488|ref|NP_001145925.1| uncharacterized protein LOC100279448 [Zea mays]
gi|219884971|gb|ACL52860.1| unknown [Zea mays]
Length = 416
Score = 234 bits (598), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 156/220 (70%), Gaps = 4/220 (1%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E E H + ++D TFE L + L E S+IS F +D N Y+ +GTA V PEENEP
Sbjct: 68 ESETHLIRLLDHQTFESLCVYPLDQYECGCSIISCSFADDSNVYYCVGTAYVIPEENEPT 127
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK----ELR 1116
+GRI++F +DG LQ I EKE KGA YS+ FNGKLLA+IN ++L++W + + EL+
Sbjct: 128 KGRILVFAVEDGSLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMSREDGSHELQ 187
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
EC H +I+AL+ + +GDFI+VGDLM+S++LL YK E + EE +RDYN NWMT++E+L
Sbjct: 188 SECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEESAIEERARDYNANWMTAVEML 247
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DDE+++GAENSYNLF +K+S A +D++R L+ VG HL
Sbjct: 248 DDEVYVGAENSYNLFTVRKNSDAATDDERARLEVVGEYHL 287
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 495 MCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
MC N ++PDSLA+A + + GTID+IQKLHIRT+PL E RRI +QE S+T +
Sbjct: 1 MCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRICHQEQSRTLAFCSF 60
Query: 555 RID 557
+ +
Sbjct: 61 KYN 63
>gi|119191318|ref|XP_001246265.1| hypothetical protein CIMG_00036 [Coccidioides immitis RS]
Length = 1072
Score = 234 bits (598), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 154/493 (31%), Positives = 255/493 (51%), Gaps = 36/493 (7%)
Query: 79 SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSR 138
++R+LL D GRLF +L ++ +V+ KV LLGE S L +L GVVF+GS
Sbjct: 295 NQRWLLADDYGRLFFFML----ILNSANAVQSWKVGLLGETSRASALVHLGGGVVFLGSH 350
Query: 139 LGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQG----------QGQLVT 188
GDS ++++ E ++++ +N+ PI+D V+DL +G Q ++VT
Sbjct: 351 QGDSHVIRITEGSFE------IIQTLSNIGPILDFTVMDLGNRGETPTHEFSSGQARIVT 404
Query: 189 CSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 247
SG F++GSLR +R+G+G+E+ + + I +W LS P+ +TL+LSFV +RV
Sbjct: 405 GSGAFRDGSLRSVRSGVGMEDLGVLGAMEHITDLWGLSAFCPEGFCDTLLLSFVDESRVF 464
Query: 248 TLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPN 305
S EVEE + G + T + N+ R +LQVT A + ES+ + W
Sbjct: 465 HFSPDGEVEEKDDFLGLLLGEPTIHAANLPSRRILQVTEHGARVTDVESRMTLWEWSAVE 524
Query: 306 GKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSE 365
+ I+ S N ++ G + G +IK + + E + +S +S
Sbjct: 525 SRKITAASSNDRHLVLMVGGQKLMVFDIGDDIKMSSTKTFEAD------KQVSGVALTSS 578
Query: 366 PAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMTCF--EGHCYLLVA 421
P +A + +++ ++ L L E LG G+ +PRS+L+ C + L VA
Sbjct: 579 PIQACILCFPQSAEVT--IIDLTGLNIRHTETLGEPGDAVPRSVLVACMFSDRAPTLFVA 636
Query: 422 LGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSLSTTNVFACSDRPTVIYSSNH 480
+ DGS+F FSL+ A+ L+D K+ LG++ V K R+ N+FA D P++IY+S
Sbjct: 637 MADGSVFSFSLNVANYSLSDANKLVLGSEAPVFKLLPRADGLYNIFATCDHPSLIYASED 696
Query: 481 KLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRI 540
++V+S VN + +C NAE+YP ++A+AT +D + I+T+ + E RR
Sbjct: 697 RIVYSAVNSDKATRICHFNAEAYPGAIAVATPDDIKIALVDAERTTQIQTLMINETVRRT 756
Query: 541 AYQESSQTFGVIT 553
+Y + + FG+ T
Sbjct: 757 SYSSTERAFGLGT 769
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 150/313 (47%), Gaps = 39/313 (12%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KFFRGPTDKKDLLFIITQRYNAMIL 749
LVVAK+NR+E + TP+GL +YGKI+V+ K R + DLLF+ T RY L
Sbjct: 29 LVVAKSNRLEFYLPTPDGLSLQHAKAIYGKISVLQKVPRSHSSATDLLFVGTDRYAYFTL 88
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
L K + +++D + +++G + +DP + + + +Y G+ +IP+ ++
Sbjct: 89 SWDPSTCQLHTEQK-YLDIADPSLRDNQSGDRSWVDPSGKFLTMEIYEGIISVIPIAQEP 147
Query: 810 FELKASS-------------------IRMEELEIQDVQFLHG--CQNPTIICIHQDVNGR 848
+ + S R+EEL ++ FLH + P I ++++ G+
Sbjct: 148 LKRPSPSAGRSSGTSEQREYLGEPLQTRIEELIVRSTAFLHHDPTKPPRIAILYENTQGK 207
Query: 849 -HVKTHEI---------SLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESIL 898
+K ++ EF D++E+ A +++PVP PLGG +I+G++ I
Sbjct: 208 VKLKLRDLIYSRGIPGGEASAAEFRDVDDLYDDLELGADILVPVPLPLGGVLILGEKFIK 267
Query: 899 YHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVK 958
Y + + ++ V + ++D +R+LL D GRLF +L ++ +V+
Sbjct: 268 YIDTVKNETITRPLEHNTIFVAWEQLD--NQRWLLADDYGRLFFFML----ILNSANAVQ 321
Query: 959 EPKVELLGEHCKG 971
KV LLGE +
Sbjct: 322 SWKVGLLGETSRA 334
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 1114 ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEISRDYNPNW 1169
E+ E S+ + + + V G+ I V DLM+S++L++Y EG + +E++R Y W
Sbjct: 835 EIEKEASYRTSTAPVDISVTGNIIAVADLMKSISLVEYHAGEGGQPDTLKEVARHYQTLW 894
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
T+ + + FL A+ NL + +D+ +++DR +Q + L
Sbjct: 895 TTAAAPVAENEFLVADAEGNLVVLNRDTTGVTEDDRRRMQVTSELRL 941
Score = 45.4 bits (106), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 611 VHNLLIIDQNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KF 669
+H+ +D N + F + + LVVAK+NR+E + TP+GL +YGKI+V+ K
Sbjct: 7 LHHASSVD-NAIKLQFMNPGEDCLVVAKSNRLEFYLPTPDGLSLQHAKAIYGKISVLQKV 65
Query: 670 FRGPTDKKDLLFIITQRTDLNLVVAKNNRIEIHT 703
R + DLLF+ T R + + ++HT
Sbjct: 66 PRSHSSATDLLFVGTDRYAYFTLSWDPSTCQLHT 99
Score = 43.9 bits (102), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR +R+G+G+E+ + + I +W LS P+ +TL+LSFV +RV S
Sbjct: 411 DGSLRSVRSGVGMEDLGVLGAMEHITDLWGLSAFCPEGFCDTLLLSFVDESRVFHFS 467
>gi|392864500|gb|EAS34654.2| UV-damaged DNA binding protein [Coccidioides immitis RS]
Length = 1144
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 154/493 (31%), Positives = 257/493 (52%), Gaps = 36/493 (7%)
Query: 79 SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSR 138
++R+LL D GRLF +L ++ +V+ KV LLGE S L +L GVVF+GS
Sbjct: 295 NQRWLLADDYGRLFFFML----ILNSANAVQSWKVGLLGETSRASALVHLGGGVVFLGSH 350
Query: 139 LGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQG----------QGQLVT 188
GDS ++++ G++ ++++ +N+ PI+D V+DL +G Q ++VT
Sbjct: 351 QGDSHVIRIT-----EGSF-EIIQTLSNIGPILDFTVMDLGNRGETPTHEFSSGQARIVT 404
Query: 189 CSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 247
SG F++GSLR +R+G+G+E+ + + I +W LS P+ +TL+LSFV +RV
Sbjct: 405 GSGAFRDGSLRSVRSGVGMEDLGVLGAMEHITDLWGLSAFCPEGFCDTLLLSFVDESRVF 464
Query: 248 TLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPN 305
S EVEE + G + T + N+ R +LQVT A + ES+ + W
Sbjct: 465 HFSPDGEVEEKDDFLGLLLGEPTIHAANLPSRRILQVTEHGARVTDVESRMTLWEWSAVE 524
Query: 306 GKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSE 365
+ I+ S N ++ G + G +IK + + E + +S +S
Sbjct: 525 SRKITAASSNDRHLVLMVGGQKLMVFDIGDDIKMSSTKTFEAD------KQVSGVALTSS 578
Query: 366 PAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMTCF--EGHCYLLVA 421
P +A + +++ ++ L L E LG G+ +PRS+L+ C + L VA
Sbjct: 579 PIQACILCFPQSAEVT--IIDLTGLNIRHTETLGEPGDAVPRSVLVACMFSDRAPTLFVA 636
Query: 422 LGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSLSTTNVFACSDRPTVIYSSNH 480
+ DGS+F FSL+ A+ L+D K+ LG++ V K R+ N+FA D P++IY+S
Sbjct: 637 MADGSVFSFSLNVANYSLSDANKLVLGSEAPVFKLLPRADGLYNIFATCDHPSLIYASED 696
Query: 481 KLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRI 540
++V+S VN + +C NAE+YP ++A+AT +D + I+T+ + E RR
Sbjct: 697 RIVYSAVNSDKATRICHFNAEAYPGAIAVATPDDIKIALVDAERTTQIQTLMINETVRRT 756
Query: 541 AYQESSQTFGVIT 553
+Y + + FG+ T
Sbjct: 757 SYSSTERAFGLGT 769
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 150/313 (47%), Gaps = 39/313 (12%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KFFRGPTDKKDLLFIITQRYNAMIL 749
LVVAK+NR+E + TP+GL +YGKI+V+ K R + DLLF+ T RY L
Sbjct: 29 LVVAKSNRLEFYLPTPDGLSLQHAKAIYGKISVLQKVPRSHSSATDLLFVGTDRYAYFTL 88
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
L K + +++D + +++G + +DP + + + +Y G+ +IP+ ++
Sbjct: 89 SWDPSTCQLHTEQK-YLDIADPSLRDNQSGDRSWVDPSGKFLTMEIYEGIISVIPIAQEP 147
Query: 810 FELKASS-------------------IRMEELEIQDVQFLHG--CQNPTIICIHQDVNGR 848
+ + S R+EEL ++ FLH + P I ++++ G+
Sbjct: 148 LKRPSPSAGRSSGTSEQREYLGEPLQTRIEELIVRSTAFLHHDPTKPPRIAILYENTQGK 207
Query: 849 -HVKTHEI---------SLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESIL 898
+K ++ EF D++E+ A +++PVP PLGG +I+G++ I
Sbjct: 208 VKLKLRDLIYSRGIPGGEASAAEFRDVDDLYDDLELGADILVPVPLPLGGVLILGEKFIK 267
Query: 899 YHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVK 958
Y + + ++ V + ++D +R+LL D GRLF +L ++ +V+
Sbjct: 268 YIDTVKNETITRPLEHNTIFVAWEQLD--NQRWLLADDYGRLFFFML----ILNSANAVQ 321
Query: 959 EPKVELLGEHCKG 971
KV LLGE +
Sbjct: 322 SWKVGLLGETSRA 334
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 119/235 (50%), Gaps = 20/235 (8%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF--------GEDPNTYFVLGTAVV 1052
EV+ H ++ D+ F L L P E +I ++ P F++GT+V+
Sbjct: 780 EVKSH-FILADEIMFRQLSVFDLNPNELVECVIRTEHPSSNAQMGSSRPRDIFIVGTSVL 838
Query: 1053 H-PEENEPK-QGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
PEE E + +GRI++F D + L++I + ++GAC ++ N K++A++ TV +
Sbjct: 839 DTPEEAEARTKGRILVFDVDTNRELRKICDFPVRGACRALAMINNKIVAALMKTVVVLNI 898
Query: 1110 TNEK----ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEI 1161
E+ E S+ + + + V G+ I V DLM+S++L++Y EG + +E+
Sbjct: 899 KKGNLYNFEIEKEASYRTSTAPVDISVTGNIIAVADLMKSISLVEYHAGEGGQPDTLKEV 958
Query: 1162 SRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+R Y W T+ + + FL A+ NL + +D+ +++DR +Q + L
Sbjct: 959 ARHYQTLWTTAAAPVAENEFLVADAEGNLVVLNRDTTGVTEDDRRRMQVTSELRL 1013
Score = 45.4 bits (106), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 611 VHNLLIIDQNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KF 669
+H+ +D N + F + + LVVAK+NR+E + TP+GL +YGKI+V+ K
Sbjct: 7 LHHASSVD-NAIKLQFMNPGEDCLVVAKSNRLEFYLPTPDGLSLQHAKAIYGKISVLQKV 65
Query: 670 FRGPTDKKDLLFIITQR 686
R + DLLF+ T R
Sbjct: 66 PRSHSSATDLLFVGTDR 82
Score = 43.9 bits (102), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR +R+G+G+E+ + + I +W LS P+ +TL+LSFV +RV S
Sbjct: 411 DGSLRSVRSGVGMEDLGVLGAMEHITDLWGLSAFCPEGFCDTLLLSFVDESRVFHFS 467
>gi|303313681|ref|XP_003066852.1| CPSF A subunit region family protein [Coccidioides posadasii C735
delta SOWgp]
gi|240106514|gb|EER24707.1| CPSF A subunit region family protein [Coccidioides posadasii C735
delta SOWgp]
gi|320031496|gb|EFW13458.1| UV-damaged DNA binding protein [Coccidioides posadasii str.
Silveira]
Length = 1144
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 153/493 (31%), Positives = 257/493 (52%), Gaps = 36/493 (7%)
Query: 79 SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSR 138
++R+LL D GRLF +L ++ +V+ KV LLGE S L +L GVVF+GS
Sbjct: 295 NQRWLLADDYGRLFFFML----ILNSANAVQSWKVGLLGETSRASALVHLGGGVVFLGSH 350
Query: 139 LGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQG----------QGQLVT 188
GDS ++++ G++ ++++ +N+ PI+D V+DL +G Q ++VT
Sbjct: 351 QGDSHVIRIT-----EGSF-EIIQTLSNIGPILDFTVMDLGNRGETPTHEFSSGQARIVT 404
Query: 189 CSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 247
SG F++GSLR +R+G+G+E+ + + I +W +S P+ +TL+LSFV +RV
Sbjct: 405 GSGAFRDGSLRSVRSGVGMEDLGVLGAMEHITDLWGVSAFCPEGFCDTLLLSFVDESRVF 464
Query: 248 TLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPN 305
S EVEE + G + T + N+ R +LQVT A + ES+ + W
Sbjct: 465 HFSPDGEVEEKDDFLGLLLGEPTIHAANLPSRRILQVTEHGARVTDVESRMTLWEWSAVE 524
Query: 306 GKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSE 365
+ I+ S N ++ G + G +IK + + E + +S +S
Sbjct: 525 SRKITAASSNDRHLVLMVGGQKLMVFDIGDDIKMSSTKTFEAD------KQVSGVALTSS 578
Query: 366 PAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMTCF--EGHCYLLVA 421
P +A + +++ ++ L L E LG G+ +PRS+L+ C + L VA
Sbjct: 579 PIQACILCFPQSAEVT--IIDLTDLNIRHTETLGEPGDAVPRSVLVACMFSDRAPTLFVA 636
Query: 422 LGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSLSTTNVFACSDRPTVIYSSNH 480
+ DGS+F FSL+ A+ L+D K+ LG++ V K R+ N+FA D P++IY+S
Sbjct: 637 MADGSVFSFSLNVANYSLSDANKLVLGSEAPVFKLLPRADGLYNIFATCDHPSLIYASED 696
Query: 481 KLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRI 540
++V+S VN + +C NAE+YP ++A+AT +D + I+T+ + E RR
Sbjct: 697 RIVYSAVNSDKATRICHFNAEAYPGAIAVATPDELKIALVDAERTTQIQTLMINETVRRT 756
Query: 541 AYQESSQTFGVIT 553
+Y + + FG+ T
Sbjct: 757 SYSSTERAFGLGT 769
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 149/313 (47%), Gaps = 39/313 (12%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KFFRGPTDKKDLLFIITQRYNAMIL 749
LVVAK+NR+E + TP+GL +YGKI+V+ K R + DLLF+ T RY L
Sbjct: 29 LVVAKSNRLEFYLPTPDGLSLQHAKAIYGKISVLQKVPRSHSSATDLLFVGTDRYAYFTL 88
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
L K + +++D + +++G + +DP + + + +Y G+ +IP+ ++
Sbjct: 89 SWDPSTCQLHTEQK-YLDIADPSLRDNQSGDRSWVDPSGKFLTMEIYEGIISVIPIAQEP 147
Query: 810 FELKAS-------------------SIRMEELEIQDVQFLHG--CQNPTIICIHQDVNGR 848
+ + R+EEL ++ FLH + P I ++++ G+
Sbjct: 148 LKRPSPSASRSSGTSEQREYLGEPLQTRIEELIVRSTAFLHHDPTKPPRIAILYENTQGK 207
Query: 849 -HVKTHEI---------SLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESIL 898
+K ++ EF D++E+ A +++PVP PLGG +I+G++ I
Sbjct: 208 VKLKLRDLIYSRGIPGGEASAAEFRDVDDLYDDLELGADILVPVPLPLGGVLILGEKFIK 267
Query: 899 YHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVK 958
Y + + ++ V + ++D +R+LL D GRLF +L ++ +V+
Sbjct: 268 YIDTVKNETITRPLENNTIFVAWEQLD--NQRWLLADDYGRLFFFML----ILNSANAVQ 321
Query: 959 EPKVELLGEHCKG 971
KV LLGE +
Sbjct: 322 SWKVGLLGETSRA 334
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 119/235 (50%), Gaps = 20/235 (8%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF--------GEDPNTYFVLGTAVV 1052
EV+ H ++ D+ F L L P E +I ++ P F++GT+V+
Sbjct: 780 EVKSH-FILADEIMFRQLSVFDLNPNELVECVIRTEHPGSNAQMGSSRPRDIFIVGTSVL 838
Query: 1053 H-PEENEPK-QGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
PEE E + +GRI+IF D + L++I + ++GAC ++ N K++A++ TV +
Sbjct: 839 DTPEEAEARTKGRILIFDVDTNRELRKICDFPVRGACRALAMINNKIVAALMKTVVVLNI 898
Query: 1110 TNEK----ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEI 1161
E+ E S+ + + + V G+ I V DLM+S++L++Y EG + +E+
Sbjct: 899 KKGNLYNFEIEKEASYRTSTAPVDISVTGNIIAVADLMKSISLVEYHAGEGGQPDTLKEV 958
Query: 1162 SRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+R Y W T+ + + FL A+ NL + +++ +++DR +Q + L
Sbjct: 959 ARHYQTLWTTAAAPVAENEFLVADAEGNLVVLNRNTTGVTEDDRRRMQVTSELRL 1013
Score = 45.4 bits (106), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 611 VHNLLIIDQNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KF 669
+H+ +D N + F + + LVVAK+NR+E + TP+GL +YGKI+V+ K
Sbjct: 7 LHHASSVD-NAIKLQFMNPGEDCLVVAKSNRLEFYLPTPDGLSLQHAKAIYGKISVLQKV 65
Query: 670 FRGPTDKKDLLFIITQR 686
R + DLLF+ T R
Sbjct: 66 PRSHSSATDLLFVGTDR 82
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR +R+G+G+E+ + + I +W +S P+ +TL+LSFV +RV S
Sbjct: 411 DGSLRSVRSGVGMEDLGVLGAMEHITDLWGVSAFCPEGFCDTLLLSFVDESRVFHFS 467
>gi|312076588|ref|XP_003140928.1| xeroderma Pigmentosum Group E Complementing protein [Loa loa]
Length = 516
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 183/291 (62%), Gaps = 13/291 (4%)
Query: 687 TDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNA 746
T+LNLV+AK NR+E+ VTPEGL+P +E ++G+IA +K FR P + D L I+T +Y+
Sbjct: 27 TELNLVLAKTNRVELFLVTPEGLKPHRECPVFGRIATIKLFRAPGEDVDSLLILTAKYHL 86
Query: 747 MILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE 806
I+ E+ T+A G++ DR+G+PSE G+IA + ++ RLY+GL K++
Sbjct: 87 AIIRW---TPTSELRTRASGHIVDRVGRPSETGMIATVHSSGLMV-FRLYDGLLKVVQWN 142
Query: 807 KDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTP 866
+ +L+ ++R ++L I D+ F+ PT+ I+QD NGRH+K +++++KE +
Sbjct: 143 EGK-DLRGFNVRCDDLYIIDITFMSDPDRPTLAYIYQDDNGRHIKVVTLNIEDKELSSPL 201
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKS----YVAVAPQIIKSSTIVCYA 922
WK DN+E EAS+VI VPEP GG +I G ++I YH G Y V + ++ CYA
Sbjct: 202 WKHDNLEGEASMVIGVPEPAGGCLIAGPDAISYHKGGDDALRYAGVPGSRLHNTHPNCYA 261
Query: 923 KVDANGERYLLGDLAGRLFMLLLE----KEEKMDGTFSVKEPKVELLGEHC 969
VD +G+RYLL DLAG L+MLLLE +E+ T SVK+ KVE LG C
Sbjct: 262 PVDRDGQRYLLADLAGNLYMLLLEFGKGQEQDESSTVSVKDMKVESLGNTC 312
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/243 (46%), Positives = 160/243 (65%), Gaps = 14/243 (5%)
Query: 80 ERYLLGDLAGRLFMLLLE----KEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFV 135
+RYLL DLAG L+MLLLE +E+ T SVK+ KVE LG I EC+ YLDNGV F+
Sbjct: 268 QRYLLADLAGNLYMLLLEFGKGQEQDESSTVSVKDMKVESLGNTCIAECMCYLDNGVCFI 327
Query: 136 GSRLGDSQLVKLNRSPDENGT-YVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFK 194
GSR GDSQL++L+ P +GT Y+S+++S+TNLAPI DM V + GQ Q++TCSG +K
Sbjct: 328 GSRFGDSQLIRLSTEPRADGTGYISLLDSYTNLAPIRDMTV--MRCNGQQQILTCSGAYK 385
Query: 195 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEV 254
+G++RIIRNGIGIEE A ++L GIK ++ L D+ L+LSF T VL ++G E+
Sbjct: 386 DGTIRIIRNGIGIEELASVELKGIKNMFTLRT-RDHEFDDYLILSFDSDTHVLLINGEEL 444
Query: 255 EETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVS 313
E+T++ GF D T + G + T+LQVT ILI ++ + W+ K I++V+
Sbjct: 445 EDTQITGFVVDGATLWAGCLFQSTTILQVTHGEVILIDGDN---IQIWKA--SKWITLVA 499
Query: 314 CNK 316
N+
Sbjct: 500 VNE 502
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+F T+LNLV+AK NR+E+ VTPEGL+P +E ++G+IA +K FR P + D L I+T
Sbjct: 22 SFIVPTELNLVLAKTNRVELFLVTPEGLKPHRECPVFGRIATIKLFRAPGEDVDSLLILT 81
Query: 685 QRTDLNLV 692
+ L ++
Sbjct: 82 AKYHLAII 89
>gi|330935579|ref|XP_003305038.1| hypothetical protein PTT_17772 [Pyrenophora teres f. teres 0-1]
gi|311318228|gb|EFQ86975.1| hypothetical protein PTT_17772 [Pyrenophora teres f. teres 0-1]
Length = 1115
Score = 233 bits (594), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 151/510 (29%), Positives = 264/510 (51%), Gaps = 49/510 (9%)
Query: 72 GSLWNGW----SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
+++ W ++R++L D GRL+M +L + V+ K++++G+ S L Y
Sbjct: 268 ATIFVAWERIDAQRFVLADDYGRLYMFML----VLSAQGKVQSWKLDIIGQTSRASTLVY 323
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ------ 181
LD G V+VGS GDSQ++K+ E ++++F+N+API+D ++D+ +
Sbjct: 324 LDAGYVYVGSHQGDSQVIKIAEKSME------IVQTFSNIAPILDFTIMDMGNRSAEGQT 377
Query: 182 -----GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNT 235
GQ ++VT SG +++GSLR +R+G+G+E+ + ++ I +++L + +T
Sbjct: 378 NEYSSGQARIVTASGAYQDGSLRSVRSGVGLEDLGVLSEMEHISDLFSLKSTASAQYADT 437
Query: 236 LVLSFVGHTRVLTLS-GAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
L++SFV +R+ EVEE E D+ T N+ ++QVT A + +
Sbjct: 438 LLVSFVNESRIFRFDPQGEVEEVDEFASLALDETTLAAANISQGRIVQVTNGRARICDLD 497
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCATG--CDVYYLEVHGSEIKQLAHRALEYEVAC 351
+S W P G +I+ S N++ VL + G V G ++ + E +VAC
Sbjct: 498 GGMIISEWLPMGGPTITAASINESHVLVSLGGVTVVSISMADGLQVVKEKTFNAESQVAC 557
Query: 352 LDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMT- 410
+ + S + + VG W + + SL +LE V + + +PRS+L+T
Sbjct: 558 IALPSDS----------SSICFVGFWNNSGLAICSLDTLEPVKTVQISDDSVPRSLLLTQ 607
Query: 411 CFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN----V 465
F L VAL DG++ ++ DP++ L+ +K + LGT+ TFR+L N V
Sbjct: 608 IFPAQPPSLFVALADGNVVTYAFDPSTHELSGRKSIVLGTREA---TFRALPRGNGLFNV 664
Query: 466 FACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQK 525
FA + P++IYSS +LV+S V + +C ++E+YP S+A+AT +D +
Sbjct: 665 FATCEHPSLIYSSEGRLVYSAVTAEKATTVCPFDSEAYPGSVAIATSEDLRIALVDTERT 724
Query: 526 LHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
H++T+ + E RRIAY S + FG+ T +
Sbjct: 725 THVQTLKVDETVRRIAYSPSLKAFGLGTIK 754
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 160/334 (47%), Gaps = 34/334 (10%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILE 750
LVVAK+NR+E + +GL +YGK+ +++ R D LF+ T R+ L
Sbjct: 29 LVVAKSNRLEFYVQESDGLALKHSKAIYGKVTMLQKLRPALSSTDHLFVGTDRFMYFTLS 88
Query: 751 CRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNF 810
+ L+ K+ +V+D + S+ G IDP R + + +Y G+ +IPL +
Sbjct: 89 WDAEQGQLQT-EKSFASVADNAARESQTGERCHIDPLGRFMTVEVYEGIITVIPLVQRGK 147
Query: 811 ELKASS----------IRMEELEIQDVQFLHGC---QNPTIICIHQDVNGR--------H 849
+ K + +R+ E+ I+ FL + P + +++D + +
Sbjct: 148 KRKQEADIAHLGEPQPVRLPEMFIRSSAFLRPRSPDEKPKMALLYEDTHSQVKLKLRELT 207
Query: 850 VKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVA 909
E+ L+E E K+ +E+ +S +IPV +P G ++IG+ SI Y+ +S +
Sbjct: 208 YAGDEVDLQEGETCKS-----ELELGSSHLIPVEKPSHGLVVIGETSIGYYDDESGEIHS 262
Query: 910 PQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHC 969
+ +++ V + ++DA +R++L D GRL+M +L + V+ K++++G+
Sbjct: 263 EPLDEATIFVAWERIDA--QRFVLADDYGRLYMFML----VLSAQGKVQSWKLDIIGQTS 316
Query: 970 KGPVVEMSSLSYIKPGSTK-QSTANQPADFNMEV 1002
+ + Y+ GS + S + A+ +ME+
Sbjct: 317 RASTLVYLDAGYVYVGSHQGDSQVIKIAEKSMEI 350
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 96/189 (50%), Gaps = 9/189 (4%)
Query: 1045 FVLGTAVVHPEENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINST 1103
FV+GTA + + ++GRI+I + L+ + E +KG C + GK++A++ T
Sbjct: 809 FVIGTAYLDDQNTTSERGRILILEVTPERILKLVTEIAVKGGCRCLATCEGKIVAALIKT 868
Query: 1104 VRLF--EWTNEKELRLECSHFNNIIA-LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFE- 1159
+ ++ E+ + + + F A + + V G I + DLM+SL +++Y E
Sbjct: 869 IVIYDVEYPTQTPFLTKLATFRCSTAPIDITVNGSKIAIADLMKSLVVVEYTKGEAGLPD 928
Query: 1160 ---EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
E++R Y W T++ +D ++L ++ NL + +D +D+D+ L V + L
Sbjct: 929 KLVEVARHYQITWATAVAEVDTNMYLESDAEGNLMVLYRDPNGVTDDDKRRLN-VSSEML 987
Query: 1217 VGDGLVQCR 1225
+G+ + + R
Sbjct: 988 LGEMVNRIR 996
Score = 40.8 bits (94), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 619 QNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKD 678
++ + NF S + LVVAK+NR+E + +GL +YGK+ +++ R D
Sbjct: 14 RHALKLNFLSPDEDCLVVAKSNRLEFYVQESDGLALKHSKAIYGKVTMLQKLRPALSSTD 73
Query: 679 LLFIITQR 686
LF+ T R
Sbjct: 74 HLFVGTDR 81
>gi|430814207|emb|CCJ28534.1| unnamed protein product [Pneumocystis jirovecii]
Length = 904
Score = 233 bits (593), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 260/509 (51%), Gaps = 54/509 (10%)
Query: 68 FSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
FSS ++ N +++L D GR+FML L K D F K+ +G SI L Y
Sbjct: 92 FSSYTTINNN---KHILADDYGRIFMLTLSNSYK-DSNFM----KISQIGITSIASVLVY 143
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQ-L 186
L N +F+GS GDSQLV + PD V++SF N++PI D V R+G+ + +
Sbjct: 144 LPNSYLFIGSHYGDSQLVNI---PD-----CLVLQSFPNISPISDFCFV--TREGRNEFI 193
Query: 187 VTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTR 245
VTCSG +K+GSLRI+R + + + I +L GI GIW L + + LVLSFV TR
Sbjct: 194 VTCSGAYKDGSLRILRYNVEMNKTLEISNLNGIYGIWGLYLQNEFEY-TALVLSFVNETR 252
Query: 246 VL-----TLSGAEVEETEMGGFTSDQ-QTFYCGNVDPRTVLQVTPSAAILISTESKARVS 299
+L L+ E+EE + + + T NV+ ++ + LI +S +
Sbjct: 253 ILKVFHNILNEPEIEEWDNFAIPNAKLPTLVAKNVNNNLFCFISNKSICLIDWKSNLVLK 312
Query: 300 SWEPPNGKSISVVSCNKNQV--LCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPL 357
W P I +C + + T + + I ++ YEV+C+DIS
Sbjct: 313 EW-IPTADDIITCACLDTEFASVSLTKGKIVVFSLKNMTIVEIGEYKFNYEVSCIDIS-- 369
Query: 358 SNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEG--H 415
L +VGLW S +LS+PS+E + L G ++PRSI +
Sbjct: 370 ----------NNALISVGLWIVPSIHILSIPSMELLLSHSLLGTVVPRSICIVSLASMNK 419
Query: 416 CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVI 475
+LV +GDG++ + LD DK GT P L F + NVFA SDR +I
Sbjct: 420 PVILVGMGDGTLLSYGLDGL-----DK-----GTLPINLSKFITPIGMNVFAISDRSIII 469
Query: 476 YSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGE 535
Y S+ KL FS++NL+++N M S + + ++ + +++ G+ID +Q+L I+T+PLGE
Sbjct: 470 YGSSGKLSFSSINLKEINCMSSFISSIFSSTIVVVSENIIKIGSIDSLQQLQIQTIPLGE 529
Query: 536 APRRIAYQESSQTFGVITTRIDIQEADGS 564
PRRI Y + + FGV+T ++ ++ ++G+
Sbjct: 530 LPRRICYHDKQKVFGVLTIKLSLEASNGN 558
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 116/212 (54%), Gaps = 6/212 (2%)
Query: 1001 EVEVHNLLIIDQNTFE-ILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEP 1059
EV+ L I+D +F+ IL + QL E + S D FV+GT PEE E
Sbjct: 559 EVQTSYLKILDVTSFDGILDSFQLELNECVQCITSVTI--DNQDIFVVGTGFSLPEEEES 616
Query: 1060 KQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNE-KELRLE 1118
+GRII+F + K+ +E ++ A Y + + K++A IN+ V ++ + + K +
Sbjct: 617 SKGRIILFGVTNKKIWVFSEIQVNDAVYCIGIIDNKIIAGINALVHIYAYDSSLKNFNVI 676
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS--FEEISRDYNPNWMTSIEIL 1176
++ + + L L V G +++GDLM+S++LL + E +E+++D NP WMT + L
Sbjct: 677 ATYRSTTLCLSLAVHGTHVIIGDLMKSVSLLAFINTENGPRLKEVAKDCNPLWMTCVAAL 736
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHL 1208
D++L++GAE NL + KD T +E++ +
Sbjct: 737 DNDLYIGAEAEGNLSLFWKDFNTTFEENKLQI 768
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 18/128 (14%)
Query: 836 PTIICIHQDVN-GRHVKTHEISL--KEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIII 892
PTI ++QD +H+ ++EI + +EK + P K ++++ +SL+IP+ + G II+
Sbjct: 9 PTIAVLYQDSKYAKHLSSYEIIVQSREKRMKEGPLKSRDLDIGSSLLIPLLD--SGIIIV 66
Query: 893 GQESILYHSGKS-----YVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEK 947
G+++++Y S ++ P + S T + N +++L D GR+FML L
Sbjct: 67 GEQTLMYIHPNSEIKSKFIIPIPTVFSSYTTI-------NNNKHILADDYGRIFMLTLSN 119
Query: 948 EEKMDGTF 955
K D F
Sbjct: 120 SYK-DSNF 126
>gi|170589359|ref|XP_001899441.1| Xeroderma Pigmentosum Group E Complementing protein [Brugia malayi]
gi|158593654|gb|EDP32249.1| Xeroderma Pigmentosum Group E Complementing protein, putative
[Brugia malayi]
Length = 521
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 183/291 (62%), Gaps = 13/291 (4%)
Query: 687 TDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNA 746
T+LNLV+AK NR+E+ VTPEGL+P +E ++G+IA +K FR P + D L I+T +Y+
Sbjct: 27 TELNLVLAKTNRVELFLVTPEGLKPHRECSVFGRIATIKLFRAPGENVDSLLILTAKYHL 86
Query: 747 MILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE 806
I+ E+ T+A G++ DR+G+PSE G+IA + ++ RLY+GL K++
Sbjct: 87 AIIRW---TPTSELRTRASGHIVDRVGRPSETGMIATVHSSGLMV-FRLYDGLLKVVQWN 142
Query: 807 KDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTP 866
+ +L+ ++R ++L I D+ F+ PT+ I+QD NGRH+K +++ +KE +
Sbjct: 143 EGK-DLRGFNVRCDDLYIVDITFMSDPDRPTLAYIYQDDNGRHIKVVALNIDDKELSSPL 201
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKS----YVAVAPQIIKSSTIVCYA 922
WK DN+E EA++VI VPEP+GG +I G ++I YH G Y V + ++ CYA
Sbjct: 202 WKHDNLEGEANIVIGVPEPVGGCLIAGPDAISYHKGGDDALRYAGVPGSRLHNTHPNCYA 261
Query: 923 KVDANGERYLLGDLAGRLFMLLLE----KEEKMDGTFSVKEPKVELLGEHC 969
VD +G+RYLL DLAG L+MLLLE +E+ + V++ KVE LGE C
Sbjct: 262 PVDRDGQRYLLADLAGNLYMLLLELGKDQEQDENSAMYVRDMKVESLGETC 312
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/243 (46%), Positives = 163/243 (67%), Gaps = 14/243 (5%)
Query: 80 ERYLLGDLAGRLFMLLLE----KEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFV 135
+RYLL DLAG L+MLLLE +E+ + V++ KVE LGE I EC+ YLBNGV F+
Sbjct: 268 QRYLLADLAGNLYMLLLELGKDQEQDENSAMYVRDMKVESLGETCIAECMCYLBNGVCFI 327
Query: 136 GSRLGDSQLVKLNRSPDENGT-YVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFK 194
GSR GDSQL++L+ P +GT Y+S+++S+TNLAPI DM V + GQ Q++TCSG +K
Sbjct: 328 GSRFGDSQLIRLSTEPRADGTGYISLLDSYTNLAPIRDMTV--MRCNGQQQILTCSGAYK 385
Query: 195 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEV 254
+G++RIIRNGIGIEE A ++L GIK ++ L D+ L+LSF T VL ++G E+
Sbjct: 386 DGTIRIIRNGIGIEELASVELKGIKNMFTLRT-RDDEFDDYLILSFDSETHVLLINGEEL 444
Query: 255 EETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVS 313
E+TE+ GFT D T + G + +T+LQVT ILI ++ + W+ + K I++V+
Sbjct: 445 EDTEITGFTVDGATLWAGCLFHSKTILQVTHGEVILIDGDN---IQVWK--SSKWITLVA 499
Query: 314 CNK 316
N+
Sbjct: 500 VNE 502
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+F T+LNLV+AK NR+E+ VTPEGL+P +E ++G+IA +K FR P + D L I+T
Sbjct: 22 SFIVPTELNLVLAKTNRVELFLVTPEGLKPHRECSVFGRIATIKLFRAPGENVDSLLILT 81
Query: 685 QRTDLNLV 692
+ L ++
Sbjct: 82 AKYHLAII 89
>gi|378732825|gb|EHY59284.1| DNA damage-binding protein 1 [Exophiala dermatitidis NIH/UT8656]
Length = 1185
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 160/512 (31%), Positives = 261/512 (50%), Gaps = 52/512 (10%)
Query: 72 GSLWNGWSE----RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
++W W++ R+LL D GRLF L++E + G V +++ +G S CL Y
Sbjct: 280 ATIWTCWTKIDDRRWLLADDFGRLFFLMIE----VSGG-EVSSWRLDTVGVASKATCLVY 334
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLER------- 180
LD G VFVGS GDSQ+V + +E G V V++SF N+API+D ++DL R
Sbjct: 335 LDEGYVFVGSHSGDSQVVHI----EEEG--VRVVQSFANIAPILDFTIMDLGRGAEAGGQ 388
Query: 181 ------QGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLD 233
GQ ++VT SG +++G++R +R+G+G+EE I +L I +W LS ++
Sbjct: 389 QALEFSSGQARIVTASGAWQDGTIRSVRSGVGLEELGTIGELSHITDLWGLSSTGQSDVQ 448
Query: 234 NTLVLSFVGHTRVLTL-SGAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
+ LV+SFV TRV S A VEE E Q T N+ R + Q+ + +
Sbjct: 449 DVLVVSFVTETRVFKFDSEAAVEEVDEFHHLEFSQPTLLAANLPDRKLAQIYETGLRITD 508
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVAC 351
ES W+PP+ S K CA V+ L V G + H +
Sbjct: 509 LESNMLTLEWKPPD-------SAAKITAACANS--VHLLMVEGGHTLHVFHASNNEAKPT 559
Query: 352 LDIS-PLSNEETSSEPAKAQ--LAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRS 406
+ S PL ++ +S A +Q + V W S +L L SL+ + + LG G IPRS
Sbjct: 560 VSKSFPLDSQISSVTVADSQSNVCIVSFWQTASVAILDLHSLDTLYTQTLGTPGTDIPRS 619
Query: 407 ILMTCF--EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLST-- 462
+L+ + L +A+ DG++ +S D A L+ ++ LGT+P V K ++
Sbjct: 620 VLVAHVLPDAPPTLFIAMADGTVLSYSFDLAKHSLSGMTRILLGTEPVVFKQLPKDNSPD 679
Query: 463 ---TNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
+NVFA ++P++IYSS ++++S VN + +C+ N E+YP+++A+AT +
Sbjct: 680 SNLSNVFASCEQPSLIYSSEGRIIYSAVNAESASRVCNFNCEAYPEAIAMATPTELKLAL 739
Query: 520 IDEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
I + ++T+ +GE R + Y+ +++ F +
Sbjct: 740 IGRERTTQLQTLSIGETVRCLTYEPTAKMFAM 771
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 136/289 (47%), Gaps = 39/289 (13%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
L+VAK +R+EI+ EGL + +YG I +++ R + + D LF+ T RY+
Sbjct: 28 TLIVAKASRLEIYEQGTEGLGLLYSKTVYGYITILEKLRPASSQTDHLFVGTDRYHYFTC 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIP-LEKD 808
+I L +++ +++D + + S+ IDP R + L LY+G+ ++P ++
Sbjct: 88 SWNAEIKQLRT-EQSYVDLADNVLRNSKEVDRCHIDPTGRYMTLELYDGVISVLPFVQPS 146
Query: 809 NFELKASS--------------IRMEELEIQDVQFLH----GCQNPTIICIHQDVNGRHV 850
N +K + +R+EEL + FL +NP + + +D ++
Sbjct: 147 NKRVKRETTTNSPVGSLGEPVQVRVEELLTRSSAFLETDPDTRENPKLAILWED----NL 202
Query: 851 KTHEISLKEKEF------------TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESIL 898
+ ++ L+E ++ T D ++ S +IPV P GG +I+G +I
Sbjct: 203 ENPQLKLRELKYYPGGDQATAELETVAELHGDQLDKGVSHLIPVSAPYGGFLILGDHAIR 262
Query: 899 YHSGKSYVAVAPQIIKSSTI-VCYAKVDANGERYLLGDLAGRLFMLLLE 946
Y + + ++TI C+ K+D R+LL D GRLF L++E
Sbjct: 263 YVDRGLTNVITQALEDNATIWTCWTKID--DRRWLLADDFGRLFFLMIE 309
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 21/174 (12%)
Query: 1045 FVLGTAVVHPEE--NEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASIN 1101
FV+GT+++ ++ E +GRI++F + + KL+ + + ++KGAC S+ +GK++A +
Sbjct: 833 FVVGTSILEEDDAGEEVTKGRILVFEVNKEKKLKAVTQIKVKGACRSLAMCDGKIVAGLV 892
Query: 1102 STVRLF-------EWTNEKELRLECSHFNNIIALFLKV------KGDFILVGDLMRSLTL 1148
TV L+ + EL+ ++ + L L V I V DLM+SL++
Sbjct: 893 KTVVLYGLIPSSTRGEHSLELQKLATYRTSTNPLSLAVTPATQDSPALIAVADLMKSLSV 952
Query: 1149 LQY-----KTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDS 1197
LQ E E SR + W ++ +L + ++ A+ NL ++ S
Sbjct: 953 LQVLPPDSSNSEYRLHETSRHFATLWSSATAVLRHDEWVVADMEGNLITLRQGS 1006
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 53
+G++R +R+G+G+EE I +L I +W LS ++ + LV+SFV TRV
Sbjct: 409 DGTIRSVRSGVGLEELGTIGELSHITDLWGLSSTGQSDVQDVLVVSFVTETRVF 462
>gi|451856466|gb|EMD69757.1| hypothetical protein COCSADRAFT_32431 [Cochliobolus sativus ND90Pr]
Length = 1116
Score = 231 bits (588), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 154/510 (30%), Positives = 266/510 (52%), Gaps = 49/510 (9%)
Query: 72 GSLWNGW----SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
+++ W ++R++L D GRL+M +L ++ V+ K++++G+ S L Y
Sbjct: 268 ATIFVAWERIDAQRFVLADDYGRLYMFML----VLNAQGRVQSWKLDVIGQTSRASTLVY 323
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-ERQGQGQ- 185
LD G VFVGS GDSQ++++ E ++++F+N+API+D ++D+ R G+GQ
Sbjct: 324 LDAGYVFVGSHQGDSQVIRIAEKSME------IVQTFSNIAPILDFTIMDMGNRSGEGQT 377
Query: 186 ---------LVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNT 235
+VT SG +++GSLR +R+G+G+E+ + ++ I +++L + +T
Sbjct: 378 NEYSSGQARIVTGSGAYQDGSLRSVRSGVGLEDLGVLGEMEHISELFSLKSTASAQYIDT 437
Query: 236 LVLSFVGHTRVLTL-SGAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
L++SFV +RV S EVEE E D+ T N+ ++QVT A + +
Sbjct: 438 LLVSFVDESRVFRFDSQGEVEEVDEFVSLALDETTLAAANIPQGRIVQVTNGRARICDLD 497
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCATG--CDVYYLEVHGSEIKQLAHRALEYEVAC 351
S W P +GK+I+ S N+ VL + G V +G ++ + E +VAC
Sbjct: 498 GGMITSEWVPTDGKTITAASVNETHVLVSLGGVTIVSLSMANGLQVVKEKTFGAESQVAC 557
Query: 352 LDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTC 411
+ + P T VG W + + SL +LE V + + +PRS+L+T
Sbjct: 558 VTL-PSGTSST---------CFVGFWNNSQLAICSLDTLEAVKTVQISDDSVPRSLLLTQ 607
Query: 412 F--EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTT----NV 465
+ L VAL DG++ ++ D ++ L+ +K + LGT+ TFR+L NV
Sbjct: 608 IFPDQPPSLFVALADGNVVTYTFDQSNHELSGRKSIVLGTREA---TFRALPRGDGLFNV 664
Query: 466 FACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQK 525
FA + P++IY+S +LV+S V + +C ++E+YP S+A+AT +D +
Sbjct: 665 FATCEHPSLIYASEGRLVYSAVTAEKATTVCPFDSEAYPGSVAIATSQDLRIALVDTERT 724
Query: 526 LHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
H++T+ + E RRIAY S + FG+ T +
Sbjct: 725 THVQTLKVDETVRRIAYSPSLKAFGLGTIK 754
Score = 103 bits (256), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 161/335 (48%), Gaps = 36/335 (10%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILE 750
LVVAK+NR+E +T +GL +YGK+ +++ R D LF+ T R+ L
Sbjct: 29 LVVAKSNRLEFYTHEADGLVLKHSKAIYGKVTMLQKLRPALSPTDHLFVGTDRFMYFTLS 88
Query: 751 CRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNF 810
+ L+ K+ +V+D + S+ G IDP R + + +Y G+ +IPL +
Sbjct: 89 WNTEKKQLQT-EKSFASVADNAARESQTGERCHIDPTGRFMTIEVYEGILTVIPLVQRGK 147
Query: 811 ELKASS----------IRMEELEIQDVQFLH---GCQNPTIICIHQDVNGRHVKTH---- 853
+ K + +R+ E+ ++ FL P + +++D + + VK
Sbjct: 148 KRKQEADIAHLGDPQPVRLPEMFVRSSAFLRPRSTDDKPKMALLYEDTHAQ-VKLRLREL 206
Query: 854 -----EISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAV 908
E+ L+E E K+ +E+ +S +IP+ EP G +IIG+ SI Y +S
Sbjct: 207 TYAGDEVDLQEGETCKS-----ELELGSSHLIPLEEPSHGLVIIGETSIGYFDDESGELQ 261
Query: 909 APQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEH 968
+ +++ V + ++DA +R++L D GRL+M +L ++ V+ K++++G+
Sbjct: 262 TEPLDEATIFVAWERIDA--QRFVLADDYGRLYMFML----VLNAQGRVQSWKLDVIGQT 315
Query: 969 CKGPVVEMSSLSYIKPGSTK-QSTANQPADFNMEV 1002
+ + Y+ GS + S + A+ +ME+
Sbjct: 316 SRASTLVYLDAGYVFVGSHQGDSQVIRIAEKSMEI 350
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 1045 FVLGTAVVHPEENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINST 1103
FV+GTA V + ++GRII+ + L+ + E +KG C + GK++A++ T
Sbjct: 809 FVVGTAYVDDQNTTSERGRIIVLEVTPERILKLVTEVAVKGGCRCLAICQGKIVAALIKT 868
Query: 1104 VRLFEWT----NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFE 1159
+ ++++ + +L S + + L V G I + DLM+SL +++Y E
Sbjct: 869 IVVYDFEYRTPSTPDLVKLASFRCSTAPIDLTVNGSLIAIADLMKSLVVVEYTKGETGLP 928
Query: 1160 ----EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVH 1215
E++R Y W T++ +D ++L ++ NL + +D +DED+ L + +
Sbjct: 929 DKLVEVARHYQITWATAVAEVDTNMYLESDAEGNLVVLYRDPNGVTDEDKRRLN-ISSEM 987
Query: 1216 LVGDGLVQCR 1225
L+G+ + + R
Sbjct: 988 LLGEMVNRIR 997
>gi|296803967|ref|XP_002842836.1| DNA damage-binding protein 1a [Arthroderma otae CBS 113480]
gi|238846186|gb|EEQ35848.1| DNA damage-binding protein 1a [Arthroderma otae CBS 113480]
Length = 1143
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 159/493 (32%), Positives = 265/493 (53%), Gaps = 40/493 (8%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRLF L+L +D +V+ KV+LLG+ S L YLD G+VFVGS
Sbjct: 298 QRWLLADDYGRLFFLML----VLDPDNAVEAWKVDLLGQTSRASVLVYLDGGLVFVGSHQ 353
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ---------GQGQLVTCS 190
GDSQ++++ E G ++++ N+API+D V+DL + GQ ++VT S
Sbjct: 354 GDSQVIQIR----EGG--FDLVQTIANIAPILDFTVMDLGDRSGEAREFSSGQTRIVTGS 407
Query: 191 GGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 249
G F +GSLR +R+G+GIE+ + + I +W L P+ +TL++SFV +RV
Sbjct: 408 GAFGDGSLRSVRSGVGIEDLGVLASMEHITDLWGLRAACPEPFSDTLLVSFVNESRVFHF 467
Query: 250 SG-AEVEETEMG--GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNG 306
S +VEE E G G Q T N+ ++QVT + A +I +S +++W+ +
Sbjct: 468 SPEGDVEEKEEGFLGLVFSQSTLLAANLPGNRIIQVTENMAKIIDLDSS--MTTWQSSHE 525
Query: 307 KS-ISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSE 365
S I+ S N + ++ G + + V S +++ + E + + +S +
Sbjct: 526 DSAITSASANDDYLVLVFGG-IRLICVSLSSYEEVGSKDFEAD------NQVSGMTIPAS 578
Query: 366 PAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT--CFEGHCYLLVA 421
PA+A + + +I +L LP L+ K+ LG GE IPRS+++ ++ L V+
Sbjct: 579 PAQACIVCLPQSAEIV--ILDLPDLKVQNKQTLGEPGEAIPRSVIVAEILYDQSPTLFVS 636
Query: 422 LGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYSSNH 480
+ DG++F FS + +++ K+TLG+ QP K R NVFA D P++IY+S
Sbjct: 637 MADGTVFSFSFSLEAFTISNSSKITLGSEQPLFKKLPRGNGQYNVFATCDHPSLIYASEG 696
Query: 481 KLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRI 540
++V+S V+ + +C+LN ++YP S+AL+ +DE + I T+P+ + RR+
Sbjct: 697 RIVYSAVDSDSASRICNLNTQAYPGSIALSNQRELKIAIVDEERTTQIHTLPMHASVRRL 756
Query: 541 AYQESSQTFGVIT 553
AY + FG+ T
Sbjct: 757 AYSPVEKAFGLGT 769
Score = 103 bits (257), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 151/322 (46%), Gaps = 49/322 (15%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKI-AVMKFFRGPTDKKDLLFIITQRYNAMIL 749
L+VAK NR+E++T + +GL +YG+I A+ K R D+LF+ T +Y L
Sbjct: 29 LIVAKANRLELYTQSADGLVLQHSSTVYGRITALQKLPRPDPALTDVLFVGTDQYAYFSL 88
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
+ N + + +++D + + + ++DP + L +Y G+ ++PL +
Sbjct: 89 TWDA-VHNQLRTERKYIDLADGSLREAHSDDRCLLDPSGSFLTLEVYEGVVSVVPLVSAD 147
Query: 810 FELKAS--------------------SIRMEELEIQDVQFL--HGCQNPTIICIHQDVNG 847
K S +R+EEL ++ FL P + +++D G
Sbjct: 148 THNKRSRSAAAHVTPSATLEQLGEPLQVRIEELMVRSSAFLDQEASHAPRLALLYEDSQG 207
Query: 848 RHVKTHEISLKEKEFTKTPWKQDN---------------IEMEASLVIPVPEPLGGAIII 892
+ + L++ ++T D +++ ASL+IP+P PLGG +I+
Sbjct: 208 KA----RLKLRDLKYTHAALSGDGGSAAELKDVTTLSGELDLGASLLIPIPRPLGGLLIL 263
Query: 893 GQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMD 952
G+ +I Y ++ + +S+ V + +VD G+R+LL D GRLF L+L +D
Sbjct: 264 GESTITYVDVSQNEIISRPLAESTVFVAWVQVD--GQRWLLADDYGRLFFLML----VLD 317
Query: 953 GTFSVKEPKVELLGEHCKGPVV 974
+V+ KV+LLG+ + V+
Sbjct: 318 PDNAVEAWKVDLLGQTSRASVL 339
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 117/230 (50%), Gaps = 19/230 (8%)
Query: 1006 NLLIIDQNTFEILHAHQLFPGEYALSLISSKF--GEDP--NT----YFVLGTAVVHPEEN 1057
+ ++ D+ F L H+L E S+I S+ GED NT F +GTA + +
Sbjct: 784 SFVLADEILFRPLSTHELRSDELVESVIRSQIPDGEDEVGNTVFRDLFFVGTAFLDDVGD 843
Query: 1058 EPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEF-NGKLLASINSTVRLFEWTNEK-- 1113
+ +GRI+ F + + L + +K + GAC ++ N KL+A + +V +F +
Sbjct: 844 DNVRGRILAFEVNRSRELALLVDKPVLGACRTLAVMDNDKLVAGLVKSVSIFRIVRDSFG 903
Query: 1114 --ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK-----TMEGSFEEISRDYN 1166
EL + ++ + + + V + I V D+M+S++L+QY +E FEEI+R Y
Sbjct: 904 NIELLKQTAYRTSTAPIDVSVTENTIAVADVMKSVSLVQYTPAEEGALEPKFEEIARHYQ 963
Query: 1167 PNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
W T++ +++ ++L AE NL + Q+++ ++ DR LQ + L
Sbjct: 964 TLWSTAVGHIEENVYLLAEAEGNLVVLQRNTTGVTESDRKRLQPTSEMRL 1013
Score = 44.7 bits (104), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR +R+G+GIE+ + + I +W L P+ +TL++SFV +RV S
Sbjct: 412 DGSLRSVRSGVGIEDLGVLASMEHITDLWGLRAACPEPFSDTLLVSFVNESRVFHFS 468
>gi|391865638|gb|EIT74917.1| damage-specific DNA binding complex, subunit DDB1 [Aspergillus
oryzae 3.042]
Length = 1135
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 262/510 (51%), Gaps = 40/510 (7%)
Query: 75 WNGW-SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVV 133
W G S+R+LL D GRLF L+L +D V+ K++ LG S L YL G+V
Sbjct: 285 WEGVDSQRWLLADDYGRLFFLML----VLDSDNQVQGWKLDHLGNTSRASALVYLGGGIV 340
Query: 134 FVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ------G 182
FVGS GDSQ++++ NG++ ++++ +N+API+D ++DL E Q G
Sbjct: 341 FVGSHQGDSQVLRIG-----NGSF-EIIQALSNIAPILDFTIMDLGNRTSESQTHEFSSG 394
Query: 183 QGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFV 241
Q ++VT SG F +G+LR +R+G+G+EE + D+ I +W L + + + +TL+++F+
Sbjct: 395 QARIVTGSGAFDDGTLRSVRSGVGMEELGVLGDMEHITDLWGLQVQAGGDTLDTLLVTFI 454
Query: 242 GHTRVLTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVS 299
TRV S EVEE + G + + T N+ +LQVT ++ E + V
Sbjct: 455 DETRVFHFSPDGEVEELDHFLGLSLSENTLLAANLPRGRILQVTEQRVLIADLEGEMVVY 514
Query: 300 SWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSN 359
W PPN I+ S N + ++ G ++ + G+E + + + + S +S
Sbjct: 515 EWTPPNELVITAASANDDSLVLVIGGELMTVLDIGTEAQVITEKKFGAD------SQVSG 568
Query: 360 EETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT--CFEGH 415
+ P ++ VG +L L L EV LG GE PRS+L+ +
Sbjct: 569 VTVPASPT--EVCVVGFPQLAKVSVLRLRDLTEVHTTSLGPAGEAFPRSVLVADVLADSP 626
Query: 416 CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTV 474
L +++ DGS+ +S L+ K+ LG+ QPT K R NVFA + P++
Sbjct: 627 PTLFISMADGSVITYSFKTDDYSLSHMNKLILGSEQPTFKKLPRGDGLYNVFATCENPSL 686
Query: 475 IYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG 534
IY S ++++S VN + +C N+E+YP S+A+AT +D + I+T+ +G
Sbjct: 687 IYGSEGRIIYSAVNSEGASRVCHFNSEAYPGSIAVATLHELKIALVDRERTTQIQTLQIG 746
Query: 535 EAPRRIAYQESSQTFGVITTRIDIQEADGS 564
RR+AY S + FG+ T I+ + ADG+
Sbjct: 747 ATVRRVAYSPSEKAFGIGT--IERKLADGA 774
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 17/233 (7%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF--GEDPN------TYFVLGTAVV 1052
E+ ++ D+ F L + +L P E S+I ++F G+D N FV+GTA +
Sbjct: 775 EIVTSRFMLADEVLFRQLDSFELRPEEIVESVIRAEFPAGKDENGREMTKDRFVVGTAYL 834
Query: 1053 HPEENEPKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTN 1111
E E +GRI++F D+G KL ++AE +KGAC ++ K++A++ T+ +++ N
Sbjct: 835 DDEGEESIRGRILMFEIDNGRKLTKVAELPVKGACRALAMLGDKIVAALVKTIVIYKVVN 894
Query: 1112 EK--ELRLE--CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEISR 1163
++LE S + + + V G+ I+V DLM+S+ LL++K E S E++R
Sbjct: 895 NNFGTMKLEKLASFRTSTAPVDVTVVGNVIVVSDLMKSVCLLEFKEGENGLPDSLTEVAR 954
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+ W T + +D + FL ++ NL + +++ A ++DR L+ + L
Sbjct: 955 HFQTVWATGVACIDKDTFLESDAEGNLIVLRRNLAGVEEDDRRRLEVTSEISL 1007
Score = 90.5 bits (223), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 152/331 (45%), Gaps = 55/331 (16%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-KDLLFIITQRYNAMI 748
+LVVAK NR+EI+T+TP+GL LY K++++ P D LF+ T RY
Sbjct: 28 SLVVAKANRLEIYTLTPDGLNLAASCTLYAKVSMLARLPAPAHSPTDHLFVGTDRYTYCT 87
Query: 749 LECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
L + + + + +++D + S+ G +IDP R + L +Y GL ++P+ +
Sbjct: 88 LSWDSAQNRIRT-ERNYVDIADPSSRESQTGNRCLIDPSGRFMTLEVYEGLVAVVPIVQL 146
Query: 809 NFELKA--------------------SSIRMEELEIQDVQFLHGCQN-PTIICIHQDVNG 847
+ ++ R++EL ++ FLH P + +++D N
Sbjct: 147 PARKRGRAPAVPTGPDAPKVGELGELTTARIDELFVRSSAFLHVQSGLPRLALLYED-NQ 205
Query: 848 RHVKTHEISLKEKEFTKTPWK-------------QDNIEMEASLVIPVPEPLGGAIIIGQ 894
+ V+ + ++E +T +++ AS +IPVP+ L I+G+
Sbjct: 206 KKVR---LMVRELNYTSATASTSADATLTHIADFAQELDLGASHLIPVPDLL----ILGE 258
Query: 895 ESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGT 954
SI Y + ++ + +++ V + VD+ +R+LL D GRLF L+L +D
Sbjct: 259 TSIKYVDDDNNEIISRPLDEATIFVAWEGVDS--QRWLLADDYGRLFFLML----VLDSD 312
Query: 955 FSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
V+ K++ LG + S+L Y+ G
Sbjct: 313 NQVQGWKLDHLGNTSRA-----SALVYLGGG 338
Score = 42.0 bits (97), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+G+LR +R+G+G+EE + D+ I +W L + + + +TL+++F+ TRV S
Sbjct: 407 DGTLRSVRSGVGMEELGVLGDMEHITDLWGLQVQAGGDTLDTLLVTFIDETRVFHFS 463
>gi|452838792|gb|EME40732.1| hypothetical protein DOTSEDRAFT_177898 [Dothistroma septosporum
NZE10]
Length = 1138
Score = 229 bits (585), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 148/507 (29%), Positives = 259/507 (51%), Gaps = 47/507 (9%)
Query: 72 GSLWNGW----SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
+++ W +RY+L D G+L++L++++ +G + + +++LGE S L Y
Sbjct: 285 ATIFVAWCSLDDQRYVLADDYGKLYLLMVQQNR--EGEYHGHQ--IDILGETSRASTLVY 340
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ------ 181
LD G VFVGS GDSQ+++++ + V+++F N+API+D V+D+ +
Sbjct: 341 LDGGRVFVGSHQGDSQIIQISEQS------IEVLQTFPNIAPILDFTVMDMGNRSSDAPV 394
Query: 182 -----GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG--IKGIWALSIGSPKNLDN 234
GQ ++VT SG FK+GSLR +R+G+G+E+ + G I +++L + L +
Sbjct: 395 NEFSSGQARIVTGSGAFKDGSLRSVRSGVGLEDRGDLGSLGAPISEVFSLRSSAAAKLVD 454
Query: 235 TLVLSFVGHTRVLTLS--GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
TLV+SFV TRV G E E GF+ T + GN+ V+QV+ ++ +L
Sbjct: 455 TLVVSFVDQTRVFVFDQEGDVEERDEFRGFSLSDATLFAGNLPDGRVVQVSSTSILLADA 514
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEY--EV 349
ES +W P G +I+ V+ +++++L + +G + L++ G I A R EV
Sbjct: 515 ESGMITDTWAAPGGANITAVAADRSKLLLSLSGKALVALDLSGESIAVQARREFSSTEEV 574
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGE--IIPRSI 407
+C+ +S +S P G W D LSL +LE + E + + +PRS+
Sbjct: 575 SCIALS-------ASIP---DTCVAGFWKDGKVAFLSLHNLEAITTERVADDDLAVPRSL 624
Query: 408 LMTCF--EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSLSTTN 464
+ + L V L DG++ ++++ +K + LGTQ R N
Sbjct: 625 SIATILRDQPATLFVGLADGNVVTYTIESLQKPFAARKSIILGTQQANFAVLPRGDGLQN 684
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
VFA + P++IY S ++V+S V +CS N+ SY +++A+A++ +DE +
Sbjct: 685 VFATCEHPSLIYGSEGRMVYSAVTAESATSICSFNSNSYGNAIAIASNDELRIAAVDEER 744
Query: 525 KLHIRTVPLGEAPRRIAYQESSQTFGV 551
H++ + + E RR AY + FG+
Sbjct: 745 TTHVQDLFIHETVRRTAYSAELKAFGL 771
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 159/335 (47%), Gaps = 57/335 (17%)
Query: 690 NLVVAKNNRIEI---HTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNA 746
+L++AK NR+E+ + T L LYGK+ ++ + T + D LF+ T RY+
Sbjct: 28 DLILAKANRLEVWSPASPTDPTLVHRHTRALYGKVTLLHKLKPATSQTDHLFVGTDRYHY 87
Query: 747 MILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE 806
+ ++L KA+ +++++ + S+ G IDP +R + + Y G+ ++P+
Sbjct: 88 FTISWNLKTNDLNT-EKAYVDIAEKAARDSQTGDRVHIDPTSRFMTIECYEGVVNVLPIA 146
Query: 807 KDNFELKASS------------IRMEELEIQDVQFLHGCQ------NPTIICIHQDVNGR 848
+ ++ +R+ EL ++ FLH Q +P +H+D
Sbjct: 147 HAGKGKRKAADNEIGELHEPIPVRIPELFVRSSCFLHRRQPTTKAVDPLFAILHED---- 202
Query: 849 HVKTHEISLKEKEFTKTPW-----------------KQDNIEMEASLVIPVPEPLGGAII 891
T+++ LK +E +P +D +E+ AS++IP+P P+ G ++
Sbjct: 203 --STNKVRLKIRELEYSPSLRPNDEPAVAELEKGHDVEDTLELGASILIPLPSPMHGLLV 260
Query: 892 IGQESILYHSGKSYVAVAPQIIKSSTI-VCYAKVDANGERYLLGDLAGRLFMLLLEKEEK 950
+G+ SI Y Y + + +TI V + +D +RY+L D G+L++L++++
Sbjct: 261 VGETSISYIEEWQYRVANTEPLDEATIFVAWCSLD--DQRYVLADDYGKLYLLMVQQNR- 317
Query: 951 MDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
+G + + +++LGE + S+L Y+ G
Sbjct: 318 -EGEYHGHQ--IDILGETSRA-----STLVYLDGG 344
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 118/220 (53%), Gaps = 12/220 (5%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGE---DPNTYFVLGTAVVHPEEN 1057
EV+ H ++D+ F+ L +++L E S+I K + D F +GTA + +++
Sbjct: 784 EVKSH-FKLVDEVAFKELDSYELNEDELVESVIRCKLDDGSGDGAERFAVGTAYLDDQDS 842
Query: 1058 EPKQGRIIIFHY-DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW---TNEK 1113
+GRI+I +D +L+ + E +KGAC + GK++A++ TV ++++ ++
Sbjct: 843 NTARGRILILEVTEDRRLKLVTELSVKGACRCLAVCEGKIVAALIKTVIIYDFEFAASKA 902
Query: 1114 ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT----MEGSFEEISRDYNPNW 1169
L + S+ + + V G+ I V DLM+S++L++YK M + EI+R + W
Sbjct: 903 TLTKKASYRTATAPIDVCVTGNVIAVTDLMKSMSLVEYKKGRTGMPDTLTEIARHFETLW 962
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
T++ + D +L ++ NL + Q D+ S+EDR L+
Sbjct: 963 GTAVANVADNTYLQSDAEGNLIVLQHDTNGFSEEDRRRLR 1002
>gi|238491136|ref|XP_002376805.1| UV-damaged DNA binding protein, putative [Aspergillus flavus
NRRL3357]
gi|220697218|gb|EED53559.1| UV-damaged DNA binding protein, putative [Aspergillus flavus
NRRL3357]
Length = 1117
Score = 229 bits (584), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 261/510 (51%), Gaps = 40/510 (7%)
Query: 75 WNGW-SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVV 133
W G S+R+LL D GRLF L+L +D V+ K++ LG S L YL G+V
Sbjct: 267 WEGVDSQRWLLADDYGRLFFLML----VLDSDNQVQGWKLDHLGNTSRASALVYLGGGIV 322
Query: 134 FVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ------G 182
FVGS GDSQ++++ NG++ ++++ +N+API+D ++DL E Q G
Sbjct: 323 FVGSHQGDSQVLRIG-----NGSF-EIIQALSNIAPILDFTIMDLGNRTSESQTHEFSSG 376
Query: 183 QGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFV 241
Q ++VT SG F +G+LR +R+G+G+EE + D+ I +W L + + + +TL+++F+
Sbjct: 377 QARIVTGSGAFDDGTLRSVRSGVGMEELGVLGDMEHITDLWGLQVQAGGDTLDTLLVTFI 436
Query: 242 GHTRVLTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVS 299
TRV S EVEE + G + + T N+ +LQVT ++ E V
Sbjct: 437 DETRVFHFSPDGEVEELDHFLGLSLSENTLLAANLPRGRILQVTEQRVLIADLEGGMVVY 496
Query: 300 SWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSN 359
W PPN I+ S N + ++ G ++ + G+E + + + + S +S
Sbjct: 497 EWTPPNELVITAASANDDSLVLVIGGELMTVLDIGTEAQVITEKKFGAD------SQVSG 550
Query: 360 EETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT--CFEGH 415
+ P ++ VG +L L L EV LG GE PRS+L+ +
Sbjct: 551 VTVPASPT--EVCVVGFPQLAKVSVLRLRDLTEVHTTSLGPAGEAFPRSVLVADVLADSP 608
Query: 416 CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTV 474
L +++ DGS+ +S L+ K+ LG+ QPT K R NVFA + P++
Sbjct: 609 PTLFISMADGSVITYSFKTDDYSLSHMNKLILGSEQPTFKKLPRGDGLYNVFATCENPSL 668
Query: 475 IYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG 534
IY S ++++S VN + +C N+E+YP S+A+AT +D + I+T+ +G
Sbjct: 669 IYGSEGRIIYSAVNSEGASRVCHFNSEAYPGSIAVATLHELKIALVDRERTTQIQTLQIG 728
Query: 535 EAPRRIAYQESSQTFGVITTRIDIQEADGS 564
RR+AY S + FG+ T I+ + ADG+
Sbjct: 729 ATVRRVAYSPSEKAFGIGT--IERKLADGA 756
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 150/326 (46%), Gaps = 51/326 (15%)
Query: 695 KNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-KDLLFIITQRYNAMILECRG 753
K NR+EI+T+TP+GL LY K++++ P D LF+ T RY L
Sbjct: 11 KANRLEIYTLTPDGLNLAASCTLYAKVSMLARLPAPAHSPTDHLFVGTDRYTYCTLSWDS 70
Query: 754 DIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELK 813
+ + + + +++D + S+ G +IDP R + L +Y GL ++P+ + +
Sbjct: 71 AQNRIRT-ERNYVDIADPSSRESQTGNRCLIDPSGRFMTLEVYEGLVAVVPIVQLPARKR 129
Query: 814 A--------------------SSIRMEELEIQDVQFLHGCQN-PTIICIHQDVNGRHVKT 852
++ R++EL ++ FLH P + +++D N + V+
Sbjct: 130 GRAPAVPTGPDAPKVGELGELTTARIDELFVRSSAFLHVQSGLPRLALLYED-NQKKVR- 187
Query: 853 HEISLKEKEFTKTPWK-------------QDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
+ ++E +T +++ AS +IPVP PLGG +I+G+ SI Y
Sbjct: 188 --LMVRELNYTSATASTSADATLTHIADFAQELDLGASHLIPVPAPLGGLLILGETSIKY 245
Query: 900 HSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKE 959
+ ++ + +++ V + VD+ +R+LL D GRLF L+L +D V+
Sbjct: 246 VDDDNNEIISRPLDEATIFVAWEGVDS--QRWLLADDYGRLFFLML----VLDSDNQVQG 299
Query: 960 PKVELLGEHCKGPVVEMSSLSYIKPG 985
K++ LG + S+L Y+ G
Sbjct: 300 WKLDHLGNTSRA-----SALVYLGGG 320
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 17/233 (7%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF--GEDPN------TYFVLGTAVV 1052
E+ ++ D+ F L + +L P E S+I ++F G+D N FV+GTA +
Sbjct: 757 EIVTSRFMLADEVLFRQLDSFELRPEEIVESVIRAEFPAGKDENGREMTKDRFVVGTAYL 816
Query: 1053 HPEENEPKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTN 1111
E E +GRI++F D+G KL ++AE +KGAC ++ K++A++ T+ +++ N
Sbjct: 817 DDEGEESIRGRILMFEIDNGRKLTKVAELPVKGACRALAMLGDKIVAALVKTIVIYKVVN 876
Query: 1112 EK--ELRLE--CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEISR 1163
++LE S + + + V G+ I+V DLM+S+ LL++K E S E++R
Sbjct: 877 NNFGTMKLEKLASFRTSTAPVDVTVVGNVIVVSDLMKSVCLLEFKEGENGLPDSLTEVAR 936
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+ W T + +D + FL ++ NL + +++ A ++DR L+ + L
Sbjct: 937 HFQTVWATGVACIDKDTFLESDAEGNLIVLRRNLAGVEEDDRRRLEVTSEISL 989
Score = 42.0 bits (97), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+G+LR +R+G+G+EE + D+ I +W L + + + +TL+++F+ TRV S
Sbjct: 389 DGTLRSVRSGVGMEELGVLGDMEHITDLWGLQVQAGGDTLDTLLVTFIDETRVFHFS 445
>gi|169773185|ref|XP_001821061.1| UV-damaged DNA binding protein [Aspergillus oryzae RIB40]
gi|83768922|dbj|BAE59059.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1139
Score = 229 bits (583), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 261/510 (51%), Gaps = 40/510 (7%)
Query: 75 WNGW-SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVV 133
W G S+R+LL D GRLF L+L +D V+ K++ LG S L YL G+V
Sbjct: 289 WEGVDSQRWLLADDYGRLFFLML----VLDSDNQVQGWKLDHLGNTSRASALVYLGGGIV 344
Query: 134 FVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ------G 182
FVGS GDSQ++++ NG++ ++++ +N+API+D ++DL E Q G
Sbjct: 345 FVGSHQGDSQVLRIG-----NGSF-EIIQALSNIAPILDFTIMDLGNRTSESQTHEFSSG 398
Query: 183 QGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFV 241
Q ++VT SG F +G+LR +R+G+G+EE + D+ I +W L + + + +TL+++F+
Sbjct: 399 QARIVTGSGAFDDGTLRSVRSGVGMEELGVLGDMEHITDLWGLQVQAGGDTLDTLLVTFI 458
Query: 242 GHTRVLTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVS 299
TRV S EVEE + G + + T N+ +LQVT ++ E V
Sbjct: 459 DETRVFHFSPDGEVEELDHFLGLSLSENTLLAANLPRGRILQVTEQRVLIADLEGGMVVY 518
Query: 300 SWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSN 359
W PPN I+ S N + ++ G ++ + G+E + + + + S +S
Sbjct: 519 EWTPPNELVITAASANDDSLVLVIGGELMTVLDIGTEAQVITEKKFGAD------SQVSG 572
Query: 360 EETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT--CFEGH 415
+ P ++ VG +L L L EV LG GE PRS+L+ +
Sbjct: 573 VTVPASPT--EVCVVGFPQLAKVSVLRLRDLTEVHTTSLGPAGEAFPRSVLVADVLADSP 630
Query: 416 CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTV 474
L +++ DGS+ +S L+ K+ LG+ QPT K R NVFA + P++
Sbjct: 631 PTLFISMADGSVITYSFKTDDYSLSHMNKLILGSEQPTFKKLPRGDGLYNVFATCENPSL 690
Query: 475 IYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG 534
IY S ++++S VN + +C N+E+YP S+A+AT +D + I+T+ +G
Sbjct: 691 IYGSEGRIIYSAVNSEGASRVCHFNSEAYPGSIAVATLHELKIALVDRERTTQIQTLQIG 750
Query: 535 EAPRRIAYQESSQTFGVITTRIDIQEADGS 564
RR+AY S + FG+ T I+ + ADG+
Sbjct: 751 ATVRRVAYSPSEKAFGIGT--IERKLADGA 778
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 155/331 (46%), Gaps = 51/331 (15%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-KDLLFIITQRYNAMI 748
+LVVAK NR+EI+T+TP+GL LY K++++ P D LF+ T RY
Sbjct: 28 SLVVAKANRLEIYTLTPDGLNLAASCTLYAKVSMLARLPAPAHSPTDHLFVGTDRYTYCT 87
Query: 749 LECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
L + + + + +++D + S+ G +IDP R + L +Y GL ++P+ +
Sbjct: 88 LSWDSAQNRIRT-ERNYVDIADPSSRESQTGNRCLIDPSGRFMTLEVYEGLVAVVPIVQL 146
Query: 809 NFELKA--------------------SSIRMEELEIQDVQFLHGCQN-PTIICIHQDVNG 847
+ ++ R++EL ++ FLH P + +++D N
Sbjct: 147 PARKRGRAPAVPTGPDAPKVGELGELTTARIDELFVRSSAFLHVQSGLPRLALLYED-NQ 205
Query: 848 RHVKTHEISLKEKEFTKTPWK-------------QDNIEMEASLVIPVPEPLGGAIIIGQ 894
+ V+ + ++E +T +++ AS +IPVP PLGG +I+G+
Sbjct: 206 KKVR---LMVRELNYTSATASTSADATLTHIADFAQELDLGASHLIPVPAPLGGLLILGE 262
Query: 895 ESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGT 954
SI Y + ++ + +++ V + VD+ +R+LL D GRLF L+L +D
Sbjct: 263 TSIKYVDDDNNEIISRPLDEATIFVAWEGVDS--QRWLLADDYGRLFFLML----VLDSD 316
Query: 955 FSVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
V+ K++ LG + S+L Y+ G
Sbjct: 317 NQVQGWKLDHLGNTSRA-----SALVYLGGG 342
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 17/233 (7%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF--GEDPN------TYFVLGTAVV 1052
E+ ++ D+ F L + +L P E S+I ++F G+D N FV+GTA +
Sbjct: 779 EIVTSRFMLADEVLFRQLDSFELRPEEIVESVIRAEFPAGKDENGREMTKDRFVVGTAYL 838
Query: 1053 HPEENEPKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTN 1111
E E +GRI++F D+G KL ++AE +KGAC ++ K++A++ T+ +++ N
Sbjct: 839 DDEGEESIRGRILMFEIDNGRKLTKVAELPVKGACRALAMLGDKIVAALVKTIVMYKVVN 898
Query: 1112 EK--ELRLE--CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEISR 1163
++LE S + + + V G+ I+V DLM+S+ LL++K E S E++R
Sbjct: 899 NNFGTMKLEKLASFRTSTAPVDVTVVGNVIVVSDLMKSVCLLEFKEGENGLPDSLTEVAR 958
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+ W T + +D + FL ++ NL + +++ A ++DR L+ + L
Sbjct: 959 HFQTVWATGVACIDKDTFLESDAEGNLIVLRRNLAGVEEDDRRRLEVTSEISL 1011
Score = 42.0 bits (97), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+G+LR +R+G+G+EE + D+ I +W L + + + +TL+++F+ TRV S
Sbjct: 411 DGTLRSVRSGVGMEELGVLGDMEHITDLWGLQVQAGGDTLDTLLVTFIDETRVFHFS 467
>gi|295667673|ref|XP_002794386.1| DNA damage-binding protein 1a [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286492|gb|EEH42058.1| DNA damage-binding protein 1a [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1195
Score = 229 bits (583), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 152/494 (30%), Positives = 252/494 (51%), Gaps = 35/494 (7%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRLF L+L +D +V+ K++LLG I L YL GV F+GS
Sbjct: 340 QRWLLADDYGRLFFLML----ILDEDNAVQSWKLDLLGNIPRASVLVYLGGGVTFIGSHQ 395
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ------GQGQLVT 188
GDSQL+++ E V+++F+N+API+D ++DL E Q GQ ++VT
Sbjct: 396 GDSQLIRITEGSFE------VIQTFSNIAPILDFTIMDLGGRAGENQTHDFSSGQARIVT 449
Query: 189 CSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 247
SG F +GSLR +R+G+G+EE + + I +WAL + + +TL++SFV +RV
Sbjct: 450 GSGAFDDGSLRSVRSGVGMEEVGVLGAMEHITDLWALRVACQEGFSDTLLVSFVDESRVF 509
Query: 248 --TLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPN 305
T G E+ E G + T N+ +LQVT + + + +W PP+
Sbjct: 510 HFTQDGEVEEKDEFMGLGLAESTLLAANLPNGRILQVTERNVRVADLDDGMLLWNWSPPS 569
Query: 306 GKSISVVSCNKNQVLCATGCDVYY-LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSS 364
K+I+ S N + ++ G V ++ G EIK + D + +S +S
Sbjct: 570 QKAITAASSNDDHLVLVVGGQVLMCFDIQG-EIKLAGKKDFG------DDTQVSGVTVAS 622
Query: 365 EPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--EGHCYLLVAL 422
PA + + +++ L+ ++ GE PRS+L+ L V++
Sbjct: 623 SPATYCILCLPQTAEVAVMSLADMTIRHSTSVGEPGEAFPRSVLVAEVLPNQPATLFVSM 682
Query: 423 GDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYSSNHK 481
DG +F FS + LT K+ LG+ QP+ K R N+FA ++P++IY++ +
Sbjct: 683 ADGGVFSFSFNADEFTLTKMSKLVLGSEQPSFKKLPRGDGLYNIFATCEQPSLIYATEGR 742
Query: 482 LVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIA 541
+++S V+ Q + +C N+E+YP S+ALAT + +D + I T+ +GE RR+A
Sbjct: 743 IIYSAVHSDQASRICHFNSEAYPGSIALATPTELKIAHVDSERTTQIHTLEIGETVRRVA 802
Query: 542 YQESSQTFGVITTR 555
Y + + FG+ T +
Sbjct: 803 YSAAEKAFGIGTIK 816
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 122/526 (23%), Positives = 211/526 (40%), Gaps = 138/526 (26%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KFFRGPTD----------------- 732
LVVAK+NR+E ++ TPEGL +YGK+ + K R P
Sbjct: 29 LVVAKSNRLEFYSQTPEGLSLQYSKAIYGKVTTLAKLSRPPIQQQQPQTLSPPQIQQPLF 88
Query: 733 --KKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARV 790
+ D+LFI T R + L K + +++D + S+ G +IDP +
Sbjct: 89 LPQTDVLFIGTDRATYFTVSWNPVTSQLRTERK-YVDLADPSSRESQLGDRCLIDPSGKF 147
Query: 791 IGLRLYNGLFKIIPL-----------------------EKDNFEL------------KAS 815
I L LY G+ +IP+ + D+ + +
Sbjct: 148 ITLELYEGIITVIPIGQPQRTARQGGRKYGKRAVTAQNQHDSSHIGNTNAAGEVELGEPC 207
Query: 816 SIRMEELEIQDVQFLHGCQN--PTIICIHQDVNGRHVKTHEISLKEKEFTKTPWK----- 868
R++EL ++ FLH + P + +++D G+ + ++E EFT
Sbjct: 208 QARVDELLVRSSAFLHTQADMLPRMAFLYEDTMGQV----RLKVRELEFTYGGMGIGTGG 263
Query: 869 ------------------QDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAP 910
++ +EM AS +IPVP PLGG +++G+ SI Y + ++
Sbjct: 264 GAGQDTGCIAVLKALDLLKEELEMGASFLIPVPAPLGGLLVLGETSIRYLDDATNECISL 323
Query: 911 QIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCK 970
+ +++ V + +VD G+R+LL D GRLF L+L +D +V+ K++LLG
Sbjct: 324 PLDEATIFVAWEQVD--GQRWLLADDYGRLFFLML----ILDEDNAVQSWKLDLLGN--- 374
Query: 971 GPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPG--EY 1028
+ S L Y+ G T + D L+ I + +FE++ ++
Sbjct: 375 --IPRASVLVYLGGGVT--FIGSHQGD-------SQLIRITEGSFEVIQTFSNIAPILDF 423
Query: 1029 ALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFH--YDDGKLQQI------AEK 1080
+ + + GE+ F G Q RI+ +DDG L+ + E
Sbjct: 424 TIMDLGGRAGENQTHDFSSG------------QARIVTGSGAFDDGSLRSVRSGVGMEEV 471
Query: 1081 EIKGACYSMCE-----------FNGKLLASINSTVRLFEWTNEKEL 1115
+ GA + + F+ LL S R+F +T + E+
Sbjct: 472 GVLGAMEHITDLWALRVACQEGFSDTLLVSFVDESRVFHFTQDGEV 517
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 127/258 (49%), Gaps = 23/258 (8%)
Query: 985 GSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT- 1043
G+ K++ N EV ++ D+ F L + L P E S+I ++F E ++
Sbjct: 813 GTIKRTLEN-----GAEVITSRFMLADEIMFRELDDYSLRPDELVESVIQAQFPEGKDSD 867
Query: 1044 -------YFVLGTAVVHPEENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGK 1095
FV+GT+ + +GRI+ F + L ++AE +KGAC ++ K
Sbjct: 868 GNESFKDMFVVGTSYLDDVGEGSIRGRILAFEVTGSRQLAKVAELPVKGACRALAVMQDK 927
Query: 1096 LLASINSTVRLFEWT----NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY 1151
++A++ TV ++ ++ L S+ + + + V G+ I V DLM+S++++++
Sbjct: 928 IVAALMKTVVIYSIAKGELSDYTLNKTASYRTSTAPIDIAVTGNLIAVADLMKSVSIIEF 987
Query: 1152 KTMEG----SFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTH 1207
K E S E++R + W T++ + + +FL ++ NL + ++ +D+D+
Sbjct: 988 KQGENDQPDSLTEVARHFQTLWSTAVAPIAENMFLESDAEGNLVVLNQNVNGVTDDDKRR 1047
Query: 1208 LQEVGTVHLVGDGLVQCR 1225
L EV + L+G+ + + R
Sbjct: 1048 L-EVTSEILLGEMVNRIR 1064
Score = 43.5 bits (101), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 53
+GSLR +R+G+G+EE + + I +WAL + + +TL++SFV +RV
Sbjct: 456 DGSLRSVRSGVGMEEVGVLGAMEHITDLWALRVACQEGFSDTLLVSFVDESRVF 509
>gi|156049323|ref|XP_001590628.1| hypothetical protein SS1G_08368 [Sclerotinia sclerotiorum 1980]
gi|154692767|gb|EDN92505.1| hypothetical protein SS1G_08368 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1153
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 164/508 (32%), Positives = 268/508 (52%), Gaps = 54/508 (10%)
Query: 74 LWNGW----SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLD 129
LW W YLLGD G L++ + +DG +V KV LG++S P L L
Sbjct: 287 LWAAWEPIDDRNYLLGDDYGFLYLFTI----LVDGA-TVTGMKVLKLGQVSKPTSLENLG 341
Query: 130 NGVVFVGSRLGDSQLVKLNR-SPDENGTYVSVMESFTNLAPIIDMVVVDL---ERQ---- 181
NGV +V S D+Q+++++ SP+ + V+V++ N+API+D ++D+ E Q
Sbjct: 342 NGVFYVASHEADNQVIQIDLGSPNYS---VTVLQVLPNIAPILDFTIMDMGGREGQTQLN 398
Query: 182 ----GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTL 236
GQ +LVT SGGF+ GSLR +R+G+G+++ A + ++ GI ++AL G P ++TL
Sbjct: 399 EYSSGQARLVTGSGGFEGGSLRSVRSGVGLDDIAILAEMEGIHKVFALHSG-PSLPNDTL 457
Query: 237 VLSFVGHTRVLTL-SGAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTES 294
V+SF TR S ++EE + ++ +T N+D +LQVT ++
Sbjct: 458 VVSFSTETRFFKFDSLGDIEEVNTISNLSAASETLLTYNLDNGCILQVTQHE---VAIHG 514
Query: 295 KARVSSWEPPNGKSISVVSCNKNQVLCAT-GCDVYYLEVHGSEIKQLAHRAL-EYEVACL 352
K+ W+PP+G+ I+ S N+N +L ++ G + L + + ++A + L + +VAC+
Sbjct: 515 KSPGHRWQPPDGQIITAASGNQNYILLSSNGRTLVTLSIE-QNLAEVAFQELGDDQVACI 573
Query: 353 DISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPL---GGEIIPRSILM 409
+ L + + +GLW S LL L +L+ + E L G IPR I +
Sbjct: 574 HVPQLLGD----------IGVIGLWKSGSISLLDLKTLKTIVSEDLRRNDGASIPRDIAL 623
Query: 410 TC-----FEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSLSTT 463
T G L V++ DG + F +D + L+ +K + LGTQ L+ R +T
Sbjct: 624 TQILLPELSGPT-LFVSMEDGIVLSFDVDSENCSLSGRKSIVLGTQQARLQILPRDNTTF 682
Query: 464 NVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI 523
NVFA + P++IY S + V+S V +CS N+ +YPDS+ +AT + ID
Sbjct: 683 NVFATCEHPSLIYGSEGRTVYSAVTAEDAITVCSFNSRAYPDSVVVATTNELKLSAIDNE 742
Query: 524 QKLHIRTVPLGEAPRRIAYQESSQTFGV 551
++ H+RT+P+GE RRIAY + F +
Sbjct: 743 RRTHVRTLPIGETVRRIAYSAKERAFAI 770
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 92/174 (52%), Gaps = 10/174 (5%)
Query: 1045 FVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQI-AEKEIKGACYSMCEFNGKLLASINST 1103
F++GT+ +H E + GR++IF + + I A +KG+C + NGK++A++N T
Sbjct: 833 FLVGTSFLHDGEVNIR-GRLLIFGVNSDRTPYIIASHTLKGSCRCIGVLNGKIVAALNKT 891
Query: 1104 VRLFEWTNEKE----LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT----ME 1155
V ++++ LR ++ + + ++G+ I V D+M+S+ L++Y +
Sbjct: 892 VVMYDYEETSRTTANLRKVATYRCATCPIDIDIRGNIIAVADIMKSVALVEYTPGVDGLP 951
Query: 1156 GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
EE+ R + TSI +D + +L +++ NL + +++ + ED+ L+
Sbjct: 952 DKLEEVGRHAQQVFATSIAEVDTDTYLESDHDGNLIVLKRNREGVTREDKLRLE 1005
Score = 70.5 bits (171), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 134/289 (46%), Gaps = 38/289 (13%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILE 750
LV+AK NR+EI T EGL +YG+I++++ + K D LF+ T R +
Sbjct: 29 LVLAKANRLEIWKATEEGLTMAYSKSIYGRISMLQKIQPAGSKTDHLFVGTVRAQYFTVM 88
Query: 751 CRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPL----- 805
+ L+ + ++ ++S + SE+ ++DP R++ + LY G+ ++ +
Sbjct: 89 WNPNTHKLDTM-QSFVDISQEHMRDSESRDRCLVDPTGRLLVMELYEGVLNLVKIVKPRG 147
Query: 806 EKDNFELKASSIRMEELEIQDVQFLHG-CQNPTIICIHQDVNGR-HVKTHEISLKEK--- 860
K ++ K +R+ E++++ FL+ + P + ++QD ++ T+ + L +K
Sbjct: 148 GKTDYLEKPEQVRISEMKVRASAFLYTHTKQPKLALLYQDARENVNLATYRM-LDDKGHP 206
Query: 861 --EFTKTPWKQDNIE---MEASLVIPVPE-------------------PLGGAIIIGQES 896
+F ++++++ + A +IPVP+ LGG +++G+
Sbjct: 207 NLQFDPKKNRENDLDDLCVGAMHIIPVPKGEDEGSKRYIVRNATTAKANLGGVVVLGETK 266
Query: 897 ILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLL 945
Y +S V + ++ + +D YLLGD G L++ +
Sbjct: 267 FTYLDDESKAIVEYALDEAVLWAAWEPID--DRNYLLGDDYGFLYLFTI 313
>gi|255956643|ref|XP_002569074.1| Pc21g20880 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590785|emb|CAP96985.1| Pc21g20880 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1140
Score = 227 bits (579), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 158/510 (30%), Positives = 264/510 (51%), Gaps = 41/510 (8%)
Query: 79 SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSR 138
S+R+LL D GRLF L ++ + + K+E LG+ S L YL G++FVGS
Sbjct: 295 SQRWLLADDYGRLFFLSF----ILNNMGEIDDWKLEYLGKTSRASVLVYLGGGMLFVGSH 350
Query: 139 LGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ------GQGQLV 187
GDSQ+++L+ G+ V+++ +N+API+D ++DL E Q GQ ++V
Sbjct: 351 HGDSQVLRLD------GSSFEVIQTLSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIV 404
Query: 188 TCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRV 246
T SG F +G+LR +R+G+G+EE + ++ I W L S + NTL+++FV TRV
Sbjct: 405 TGSGAFDDGTLRSVRSGVGMEELGVLGEMEHITDFWGLQTRSKDDFLNTLIVTFVDETRV 464
Query: 247 LTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
S EVEE + G + + T + +LQVT ++ ES W P
Sbjct: 465 FQFSTDGEVEELDNFLGLSLTECTLLVTRLQGDRILQVTEQRVLVADLESGMVTFEWAPQ 524
Query: 305 NGKSISVVSCNKNQ-VLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETS 363
+ K I+ S N++ VL +G V ++ + ++ + + L + +S
Sbjct: 525 DQKLITAASANEDHLVLVISGQIVASFDIRDN-VQIITQKDLGAD------QQISGLTVP 577
Query: 364 SEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT--CFEGHCYLL 419
S P +A G ++++ + + LG GE PRS+L+ + H L
Sbjct: 578 SSPTGVFIA--GFPQSAKVSIMAIKDFAILQTKSLGPTGESFPRSVLVAEVLADSHPTLF 635
Query: 420 VALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYSS 478
+++ DG + FSL+P L++ K+ LG+ QPT K + NVFA + P++IY S
Sbjct: 636 ISMADGCVITFSLNPQDYSLSEMNKLILGSEQPTFKKLPKGDGLYNVFATCENPSLIYGS 695
Query: 479 NHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPR 538
++++S VN + +C LNAE++PDS+A+AT+ +D+ + I+T+P+G R
Sbjct: 696 EGRIIYSAVNSEGASRVCHLNAEAFPDSIAVATEKELKIALVDKERTTQIQTLPMGSTVR 755
Query: 539 RIAYQESSQTFGVITTRIDIQEADGSTPVR 568
R+AY S + FG+ T ID + +G+ V+
Sbjct: 756 RVAYSPSEKAFGIGT--IDRKLVNGAEVVK 783
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 17/233 (7%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF--GEDPN------TYFVLGTAVV 1052
EV + ++ D+ F L A +L P E S++ ++ G+D N FV+GTA
Sbjct: 780 EVVKSHFVLADEIMFRRLDALELGPDELVESVVRAELPAGKDENGKEIMKDRFVVGTAFA 839
Query: 1053 HPEENEPKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLF--EW 1109
E++E +GRI+I D G KL Q+AE + GAC ++ ++A++ TV ++ +
Sbjct: 840 DEEQDESIRGRILILEVDHGRKLSQVAELPVMGACRALAMMGDCVVAALVKTVVVYRVKI 899
Query: 1110 TNEKELRLE--CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEISR 1163
N ++LE ++ + + + V D I V DLM+SL L++Y E+ R
Sbjct: 900 NNVGPMKLEKLAAYRTSTAPVDVIVVDDLIAVADLMKSLCLVRYTPGHAGEPAKLTEVGR 959
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
Y W T+I + DE FL ++ NL + ++ + +D+ L + L
Sbjct: 960 HYQTVWSTAIACVGDETFLQSDAEGNLIVLSRNMNGVTAQDKHRLMPTSEISL 1012
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 149/317 (47%), Gaps = 52/317 (16%)
Query: 698 RIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-KDLLFIITQRYNAMILECRGDID 756
R+E +T+T +G+ L ++ ++ PT+ D LF+ T +YN + + +
Sbjct: 33 RLEFYTLTADGIVLTATRALNARVTMLARLPAPTNSPTDHLFVGTDQYNYFTITWDRESN 92
Query: 757 NLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI-------------- 802
++ ++ ++++ + S+ +IDP R + L +Y G+ +
Sbjct: 93 QIKT-ARSCVDIAEPSSRESQCAPRCLIDPTGRFMTLEVYEGVIVVVPIVQPTKKRGRMS 151
Query: 803 -------IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEI 855
+PL+ + K ++ R++EL ++ FLH NP + +++D N + V+ +
Sbjct: 152 MGGPQADLPLQVGELD-KPTTSRIDELFVRSSAFLHSESNPWLALLYED-NQQKVR---L 206
Query: 856 SLKEKEFT--------KTPWKQ----------DNIEMEASLVIPVPEPLGGAIIIGQESI 897
++E +FT +K+ +++ +S +IP+P PLGG I++G+ SI
Sbjct: 207 RIRELDFTPGTAGTLADATFKEVQKLEGGEFGQELDLGSSHLIPIPAPLGGLIVLGETSI 266
Query: 898 LYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSV 957
Y + + + +++ V + KVD+ +R+LL D GRLF L ++ +
Sbjct: 267 KYIDDNANDVITRNLDEATVFVAWEKVDS--QRWLLADDYGRLFFLSF----ILNNMGEI 320
Query: 958 KEPKVELLGEHCKGPVV 974
+ K+E LG+ + V+
Sbjct: 321 DDWKLEYLGKTSRASVL 337
Score = 44.3 bits (103), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+G+LR +R+G+G+EE + ++ I W L S + NTL+++FV TRV S
Sbjct: 412 DGTLRSVRSGVGMEELGVLGEMEHITDFWGLQTRSKDDFLNTLIVTFVDETRVFQFS 468
>gi|302503607|ref|XP_003013763.1| hypothetical protein ARB_07875 [Arthroderma benhamiae CBS 112371]
gi|291177329|gb|EFE33123.1| hypothetical protein ARB_07875 [Arthroderma benhamiae CBS 112371]
Length = 1148
Score = 227 bits (578), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 164/499 (32%), Positives = 263/499 (52%), Gaps = 42/499 (8%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRLF L+L +D +V KV+ LG S L YLD G+VFVGS
Sbjct: 302 QRWLLADDYGRLFFLML----VLDADNAVDTWKVDFLGVTSRASVLVYLDGGIVFVGSHQ 357
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ---------GQGQLVTCS 190
GDSQ++++ E G ++++ +N+API+D V+D+ + GQ ++VT S
Sbjct: 358 GDSQVIQIK----EGG--FDLVQTISNIAPILDFTVMDMGDRSGATREFSSGQTRIVTGS 411
Query: 191 GGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 249
G F +GSLR +R+G+GIEE + + I +W L P+ +TL++SFV TRV
Sbjct: 412 GAFGDGSLRSVRSGVGIEELGVLASMEHITDLWTLRSACPEPFFDTLLVSFVNETRVFHF 471
Query: 250 SG-AEVEETEMG--GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARV--SSWEPP 304
S +VEE E G G Q T N+ +LQVT S + I +S + SS+E
Sbjct: 472 SADGDVEEKEDGFLGLVFSQSTLLATNIPGNRILQVTESTSRAIDVDSGMIIWRSSYEE- 530
Query: 305 NGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSS 364
+I+ S N + ++ G V + + S + + R E + + +S +
Sbjct: 531 --FTITSASANDDYLVLVLG-GVRLVCISLSTFELVGSRDFEAD------NQVSGMTIPA 581
Query: 365 EPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMTCF--EGHCYLLV 420
P +A + + +I +L+LP LE K+ LG GE IPRS+++ L V
Sbjct: 582 SPTQACIVCLPQSAEII--ILNLPELEVKNKQALGEPGEAIPRSVIVAEILPNKPPTLFV 639
Query: 421 ALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
++ DG++F FS D + + + K+TLG+ QP+ K R NVFA D P++I++S
Sbjct: 640 SMADGTVFSFSFDVHAFAIFNSSKITLGSEQPSFKKLPRGNGQYNVFATCDHPSLIHASE 699
Query: 480 HKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRR 539
++V+S V+ + +CSLN ++YP S+AL++ + +DE + I T+P+ + RR
Sbjct: 700 GRIVYSAVDSASASRICSLNTQAYPGSIALSSQNELKIAIVDEERTTQIHTLPMHASVRR 759
Query: 540 IAYQESSQTFGVITTRIDI 558
+AY + FG+ T + I
Sbjct: 760 LAYSPMEKAFGLGTVKRKI 778
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 143/322 (44%), Gaps = 45/322 (13%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFF----RGPTDKKDLLFIITQRYNA 746
LVVAK NR+E++T + +GL +YG+I ++K G D LF+ T +Y
Sbjct: 29 LVVAKANRLELYTQSADGLVLQHSKAIYGRITLLKKLPRSTAGGLALTDALFVGTDQYAY 88
Query: 747 MILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE 806
+ + L K + +++D + + + IDP + L +Y G+ I PL
Sbjct: 89 FSITWDSVHEQLRTERK-YIDLADGSLREAHSDDRCQIDPSGSFLTLEVYEGVVSIFPLV 147
Query: 807 KDNFELKAS---------------------SIRMEELEIQDVQFL--HGCQNPTIICIHQ 843
+ +A +R+EEL ++ FL P +++
Sbjct: 148 TADSHKRAKSAVSASASSASTPVEQLGEPLQVRIEELMVRSSAFLDQEASNTPRFALLYE 207
Query: 844 DVNGR-HVKTHEISLKEKEFTKTPWK----------QDNIEMEASLVIPVPEPLGGAIII 892
D G+ +K ++ T P D +++ AS++IPVP PLGG +II
Sbjct: 208 DTQGKVKLKLRDLKYTHAIITSDPGSAAELKDVTTLSDEVDLGASILIPVPRPLGGLLII 267
Query: 893 GQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMD 952
G+ SI Y ++ + +S+ V + +VD G+R+LL D GRLF L+L +D
Sbjct: 268 GESSIKYVDVSRNETISRPLAESTVFVAWEQVD--GQRWLLADDYGRLFFLML----VLD 321
Query: 953 GTFSVKEPKVELLGEHCKGPVV 974
+V KV+ LG + V+
Sbjct: 322 ADNAVDTWKVDFLGVTSRASVL 343
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 985 GSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSK--FGED-- 1040
G+ K+ +N +E + ++ D+ F L + L P E +I S+ +G+D
Sbjct: 772 GTVKRKISN-----GVEEVSSSFVLADEILFRPLSTYDLRPDELVECVIRSQLNYGKDEV 826
Query: 1041 ----PNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGK 1095
F +GTA + ++ +GRI+IF + + L I EK + GAC ++ +
Sbjct: 827 GNSISKDLFFVGTAFLDDVGDDHIRGRILIFEVNRSRELSLIVEKSLMGACRTLAVMDHT 886
Query: 1096 LL-ASINSTVRLFEWTNEK----ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQ 1150
LL A + +V +F+ ++ L ++ + + + V GD + V D+M+S++L+Q
Sbjct: 887 LLVAGLVKSVSVFKLARDRFGNILLEKHTAYRTSTAPIDISVVGDTVAVADVMKSMSLVQ 946
Query: 1151 YKT-----MEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDR 1205
Y E FEE++R Y W T++ +++ ++L A+ NL + Q++ ++ DR
Sbjct: 947 YTQAEEGEQEPKFEEVARHYQTLWSTAVAPIEENVYLLADAEGNLVVLQQNITGVTESDR 1006
Query: 1206 THLQEVGTVHL 1216
LQ + L
Sbjct: 1007 KRLQPTSEIRL 1017
Score = 45.8 bits (107), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSG 57
+GSLR +R+G+GIEE + + I +W L P+ +TL++SFV TRV S
Sbjct: 416 DGSLRSVRSGVGIEELGVLASMEHITDLWTLRSACPEPFFDTLLVSFVNETRVFHFSA 473
>gi|326474493|gb|EGD98502.1| UV-damaged DNA binding protein [Trichophyton tonsurans CBS 112818]
gi|326481558|gb|EGE05568.1| UV-damaged DNA binding protein [Trichophyton equinum CBS 127.97]
Length = 1147
Score = 226 bits (576), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 160/498 (32%), Positives = 262/498 (52%), Gaps = 40/498 (8%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRLF L+L +D +V+ KV+ LG S L YLD G+VFVGS
Sbjct: 302 QRWLLADDYGRLFFLML----VLDTDNAVESWKVDYLGVTSRASVLVYLDGGIVFVGSHQ 357
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ---------GQGQLVTCS 190
GDSQ++++ E G ++++ +N+API+D ++D+ + GQ ++VT S
Sbjct: 358 GDSQVIQIK----EGG--FDLIQTISNIAPILDFTIMDMGDRLGATREFSSGQTRIVTGS 411
Query: 191 GGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 249
G F +GSLR +R+G+GIEE + + I +WAL P+ +TL++SFV TRV
Sbjct: 412 GAFGDGSLRSVRSGVGIEELGVLASMEHITDLWALRSACPEPFSDTLLVSFVNETRVFHF 471
Query: 250 SG-AEVEETEMG--GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNG 306
S +VEE E G G Q T N+ +LQVT S++ +I + + W
Sbjct: 472 SADGDVEEKEDGFLGLVFSQSTLLATNIPGNRILQVTESSSRVIDIDGGMII--WRSTYE 529
Query: 307 K-SISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSE 365
+ +I+ S N + ++ G + + + S + + R E + + +S +
Sbjct: 530 EFTITSASANDDYLVLVLG-GIRLVCISLSTFELIGSREFEAD------NQVSGMTIPAS 582
Query: 366 PAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMTCF--EGHCYLLVA 421
P +A + + +I +L LP LE K+ LG GE IPRS+++ L V+
Sbjct: 583 PIQACIVCLPQSAEIV--ILGLPGLEVKNKQTLGEPGEAIPRSVIVAEILPNNPPTLFVS 640
Query: 422 LGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYSSNH 480
+ DG++F FS D + + + K+TLG+ QP+ K R NVFA D P++I++S
Sbjct: 641 MADGTVFSFSFDVHAFAIFNSSKITLGSEQPSFKKLPRGNGQYNVFATCDHPSLIHASEG 700
Query: 481 KLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRI 540
++V+S V+ + +CSLN ++YP S+AL++ +DE + I T+P+ + RR+
Sbjct: 701 RIVYSAVDSASASRICSLNTQAYPGSIALSSQHELKIAIVDEERTTQIHTLPMHASVRRL 760
Query: 541 AYQESSQTFGVITTRIDI 558
AY + FG+ T + I
Sbjct: 761 AYSPVEKAFGLGTVKRKI 778
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 148/324 (45%), Gaps = 49/324 (15%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK----KDLLFIITQRYNA 746
LVVAK NR+E++T + +GL +YG+I ++K T D LF+ T +Y
Sbjct: 29 LVVAKANRLELYTQSADGLILQHSRAIYGRITLLKRLPRSTAAGLALTDALFVGTDQYAY 88
Query: 747 MILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE 806
+ D + L K + +++D + + + IDP + L +Y G+ I PL
Sbjct: 89 FSITWDPDHELLRTERK-YIDLADGSLREAHSDDRCQIDPSGNFLTLEVYEGVVSIFPLV 147
Query: 807 KDNFELKAS---------------------SIRMEELEIQDVQFL--HGCQNPTIICIHQ 843
+ +A +R EEL ++ FL P +++
Sbjct: 148 TTDSHKRAKSAVSASASAASTSIEQLGEPLQVRTEELMVRSSAFLDQEASNTPRFALLYE 207
Query: 844 DVNG------RHVK-THEI------SLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAI 890
D G R +K TH I S E ++ T D IE+ AS++IPVP PLGG +
Sbjct: 208 DTQGQVRLTLRDLKYTHAIVTSDPGSAAELKYVTT--LSDEIELGASILIPVPRPLGGLL 265
Query: 891 IIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEK 950
+IG+ SI Y ++ + +S+ V + +VD G+R+LL D GRLF L+L
Sbjct: 266 VIGESSIKYVDVSKNETISRPLAESTVFVAWEQVD--GQRWLLADDYGRLFFLML----V 319
Query: 951 MDGTFSVKEPKVELLGEHCKGPVV 974
+D +V+ KV+ LG + V+
Sbjct: 320 LDTDNAVESWKVDYLGVTSRASVL 343
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 24/251 (9%)
Query: 985 GSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSK--FGED-- 1040
G+ K+ +N +E + ++ D+ F L + L P E +I S+ +G+D
Sbjct: 772 GTVKRKISN-----GVEEVSSSFVLADEILFRPLSTYDLRPDELVECVIRSQLNYGKDEV 826
Query: 1041 ----PNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGK 1095
F +GTA + ++ +GRI++F + + L I EK + GAC ++ +
Sbjct: 827 GNLISKDLFFVGTAFLDDVGDDHIRGRILVFEVNRSRELSLIVEKSLMGACRTLAVMDQT 886
Query: 1096 LL-ASINSTVRLFEWTNEK----ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQ 1150
LL A + +V +F+ + L ++ + + + V + + V D+M+S++L+Q
Sbjct: 887 LLVAGLVKSVSVFKLARGRFGNILLEKHAAYRTSTAPIDISVVDNTVAVADVMKSMSLVQ 946
Query: 1151 YKT-----MEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDR 1205
Y E FEEI+R Y W T++ +++ ++L A+ NL + Q++ ++ DR
Sbjct: 947 YTQAEEGGQEPKFEEIARHYQTLWSTAVAPIEENVYLLADAEGNLVVLQQNITGVTESDR 1006
Query: 1206 THLQEVGTVHL 1216
LQ + L
Sbjct: 1007 RRLQPTSEIRL 1017
Score = 48.5 bits (114), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSG 57
+GSLR +R+G+GIEE + + I +WAL P+ +TL++SFV TRV S
Sbjct: 416 DGSLRSVRSGVGIEELGVLASMEHITDLWALRSACPEPFSDTLLVSFVNETRVFHFSA 473
>gi|154286506|ref|XP_001544048.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407689|gb|EDN03230.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1158
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 153/502 (30%), Positives = 254/502 (50%), Gaps = 38/502 (7%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRLF L+L +D +V+ K++LLG+I L Y+ G+ F+GS
Sbjct: 306 QRWLLADDYGRLFFLML----VLDTDNAVQSWKLDLLGDIPRASVLVYMGGGITFIGSHQ 361
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL------ERQ------GQGQLV 187
GD +L+++ E V+++F N+API+D ++DL E Q GQ ++V
Sbjct: 362 GDPELIRITEGSFE------VIQTFANIAPILDFTIMDLGGRAIGESQTHEFSSGQARIV 415
Query: 188 TCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRV 246
T SG F +GSLR +R+G+G+EE + + I +WAL + P+ +TL++SFV TRV
Sbjct: 416 TGSGAFNDGSLRTVRSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLLVSFVDETRV 475
Query: 247 LTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
+ EVEE E G + T N+ +LQVT + + + W P
Sbjct: 476 FYFTPDGEVEEKEEFMGLGLAESTLLAANLPHGRILQVTEWNVRVAELDGGMVIWEWSPE 535
Query: 305 NGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSS 364
K+I+ S N + ++ G V + +I + ++ + +S ++
Sbjct: 536 QQKAITAASSNDDHLVLMVGGQVLMIFDIRGDINITGEKDFGFD------TQVSGVTVTT 589
Query: 365 EPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT--CFEGHCYLLV 420
P +A + + ++ ++SL L LG G+ +PRS+L+ L V
Sbjct: 590 SPVRACILCLPQTAEVV--VMSLSDLAIRRSTSLGEPGDAVPRSVLVAEVLSNNPATLFV 647
Query: 421 ALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
++ DGS+F FS + LT K+TLG+ QP+ K R NVFA ++P +IY+
Sbjct: 648 SMADGSVFSFSFNLEDFSLTSMSKLTLGSEQPSFKKLPRGDGLYNVFATCEQPRLIYAVE 707
Query: 480 HKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRR 539
++V+S VN + +C N+E+YP S+ALAT S +D + I+T+ +GE RR
Sbjct: 708 GRIVYSAVNSGLASRICHFNSEAYPGSIALATPSELKITLVDAERTTQIQTLEVGETVRR 767
Query: 540 IAYQESSQTFGVITTRIDIQEA 561
+AY + FG+ T + +++
Sbjct: 768 VAYSAPERAFGIGTIKRTLEDG 789
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 120/242 (49%), Gaps = 18/242 (7%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF-------GEDP-NTYFVLGTAVV 1052
EV ++ D+ F L + L E S+I ++F G D FV+GT+ +
Sbjct: 791 EVIASRFMLADEIMFRELDIYDLNKDELVESVIRAQFPDGIDREGNDLFKDLFVVGTSYL 850
Query: 1053 HPEENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTN 1111
+GRI+ F + +L ++AE +KGAC ++ K++A++ TV ++ +
Sbjct: 851 DDFGEGSIRGRILAFEVTANRQLAKVAEMPVKGACRALAIVQDKIVAALMKTVVVYTISK 910
Query: 1112 ----EKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT----MEGSFEEISR 1163
+ L S+ + + + V G+ I V DLM+S+++++Y+ + S E++R
Sbjct: 911 GQFADYTLSKTASYRTSTAPIDIAVTGNLIAVADLMKSVSIVEYQQGSNGLPDSLTEVAR 970
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLVQ 1223
+ W T++ + ++ +L ++ NL + ++ +D+DR L EV + L+G+ + +
Sbjct: 971 HFQTLWSTAVAHVAEDTWLESDAEGNLVMLHRNVNGVTDDDRRRL-EVTSEILLGEMVNR 1029
Query: 1224 CR 1225
R
Sbjct: 1030 IR 1031
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
Query: 869 QDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANG 928
++ +EM AS ++PVP PLGG +++G+ SI Y S ++ + +++ V + +VD G
Sbjct: 248 KEELEMGASFLVPVPAPLGGLLVLGETSIRYLDDASNECISQPLKEATIFVAWEQVD--G 305
Query: 929 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVV 974
+R+LL D GRLF L+L +D +V+ K++LLG+ + V+
Sbjct: 306 QRWLLADDYGRLFFLML----VLDTDNAVQSWKLDLLGDIPRASVL 347
Score = 49.3 bits (116), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR +R+G+G+EE + + I +WAL + P+ +TL++SFV TRV +
Sbjct: 423 DGSLRTVRSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLLVSFVDETRVFYFT 479
Score = 47.0 bits (110), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 25/138 (18%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KFFRGPTD----------------- 732
LVVAK+NR+E ++ T +GL +YGK+ ++ K R P
Sbjct: 29 LVVAKSNRLEFYSQTHDGLSLEYSKAIYGKVTMLAKLSRPPLPSKPPPQPQSLDHQLPLQ 88
Query: 733 ------KKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDP 786
+ D+LFI T R + + NL K + +++D + S+ G +IDP
Sbjct: 89 PAPFRPQTDILFIGTDRASYFTVSWDQKTKNLRTERK-YVDLADPSARASQLGDRCLIDP 147
Query: 787 EARVIGLRLYNGLFKIIP 804
R + L LY G+ +IP
Sbjct: 148 SGRFLTLELYEGIVTVIP 165
>gi|350629921|gb|EHA18294.1| damage-specific DNA binding protein [Aspergillus niger ATCC 1015]
Length = 1140
Score = 226 bits (575), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 156/521 (29%), Positives = 271/521 (52%), Gaps = 45/521 (8%)
Query: 72 GSLWNGW----SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
+++ W S+R+LL D GRLF L+L +D V+ K++ LG + L Y
Sbjct: 284 ATIFVAWEQVDSQRWLLADDYGRLFFLML----VLDSNNQVQSWKLDHLGNTARASVLIY 339
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ- 181
L GV+FVGS GDSQ++++ NG+ + V+++ +N+API+D ++DL E Q
Sbjct: 340 LGGGVIFVGSHQGDSQVLRIG-----NGS-LEVIQTLSNIAPILDFTIMDLGNRTSESQT 393
Query: 182 -----GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNT 235
GQ ++VT SG F +G+LR +R+G+G+EE + ++ I ++ L + + +T
Sbjct: 394 HEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGEMELITDLFGLQLATKGGYLDT 453
Query: 236 LVLSFVGHTRVLTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
L+++FV TRV + EVEE + G + + T N+ +LQVT ++ E
Sbjct: 454 LLVTFVDETRVFQFNFDGEVEELDSFLGLSLSENTLLAMNLPGGRILQVTEQRVLIADIE 513
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLD 353
+ W PP+ I+ S N + ++ +G + + ++++ ++ + +
Sbjct: 514 GGMVTNEWTPPDNLVITSASANNDSIVLVSGGQLMTVLDINNDVRVISQKDFGADSQISG 573
Query: 354 IS-PLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT 410
++ PLS+ A + VG +L L L E+ LG GE PRS+L+
Sbjct: 574 VTVPLSS---------AGVCIVGFPQLAKVSVLDLGRLSELHTTSLGPAGEAFPRSVLVA 624
Query: 411 CFEGHC--YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFA 467
+ L +++ DGS+ +S D ++ LT ++ LG+ QPT K R NVFA
Sbjct: 625 DVLANSPSTLFISMADGSVITYSFDASNYSLTGMNRLILGSEQPTFKKLPRGDGLYNVFA 684
Query: 468 CSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLH 527
+ P++IY S ++++S VN + +C N+E+YP S+A+AT +D+ +
Sbjct: 685 TCENPSLIYGSEGRIIYSAVNSEGASRVCHFNSEAYPGSIAVATRHDLKIALVDKERTTQ 744
Query: 528 IRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVR 568
I+T+P+GE RR+AY S + FG+ T I+ + DG+ V+
Sbjct: 745 IQTLPMGETARRVAYSPSEKAFGIGT--IERKLKDGAEMVQ 783
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 152/316 (48%), Gaps = 39/316 (12%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-KDLLFIITQRYNAMIL 749
LVVAK NR+EI+++TPEGL L+ K+ ++ P + D LF+ T RY L
Sbjct: 29 LVVAKANRLEIYSLTPEGLNLAASCSLFAKVTMLARLPAPANSPTDHLFVGTDRYTYCTL 88
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPL---- 805
G+ + + + + ++SD + ++ G +IDP R + L +Y G+ ++P+
Sbjct: 89 SWDGERNQIRT-ERNYVDISDPSSREAQTGNRCLIDPSGRFMTLEVYEGVIAVVPIVQLP 147
Query: 806 -EKDNFEL---------------KASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRH 849
+K ++ + ++ R++EL ++ FLH P + + + N +
Sbjct: 148 SKKRGRQVAPPSGPDAPRVGELGEPTTARIDELFVRSSAFLHVQSGPPRLALLYEDNQKK 207
Query: 850 VKTHEISLKEKEFTKTPWKQ-----------DNIEMEASLVIPVPEPLGGAIIIGQESIL 898
V+ +L T + +++ AS +IPVP PLGG +++G+ SI
Sbjct: 208 VRLKVRALHYSAATASTGADAAFEESLDGFSQELDLGASHLIPVPAPLGGLLVLGETSIK 267
Query: 899 YHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVK 958
Y S V+ + +++ V + +VD+ +R+LL D GRLF L+L +D V+
Sbjct: 268 YVDTDSNEIVSRPLDEATIFVAWEQVDS--QRWLLADDYGRLFFLML----VLDSNNQVQ 321
Query: 959 EPKVELLGEHCKGPVV 974
K++ LG + V+
Sbjct: 322 SWKLDHLGNTARASVL 337
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 117/227 (51%), Gaps = 17/227 (7%)
Query: 1007 LLIIDQNTFEILHAHQLFPGEYALSLISSKF--GEDPN------TYFVLGTAVVHPEENE 1058
++ D+ F L A L P E S+I ++F G+D N FV+GTA + E E
Sbjct: 786 FVLADEIMFRRLDAFDLRPEELVESVIRAEFSAGKDENGRDVFKDRFVVGTAYLDDENEE 845
Query: 1059 PKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK--EL 1115
+GRI++F D+G KL ++AE +KGAC ++ K++A++ TV ++ N +
Sbjct: 846 SIRGRILVFEIDNGRKLTKVAELPVKGACRALAMLGEKIVAALVKTVVIYGVVNNDFGAM 905
Query: 1116 RLE--CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT----MEGSFEEISRDYNPNW 1169
+LE S+ + + + V G+ I V DLM+S+ L++Y M S E++R + W
Sbjct: 906 KLEKLASYRTSTAPVDVTVTGNVIAVADLMKSVCLVEYSEGENGMPDSLTEVARHFQTVW 965
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
T + + + FL + NL + +++ ++D+ L+ G + L
Sbjct: 966 ATGVSCIAKDTFLETDAEGNLIVLRRNLTGVEEDDKRRLEVTGEISL 1012
Score = 47.0 bits (110), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 619 QNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-K 677
+N + +F ++ + LVVAK NR+EI+++TPEGL L+ K+ ++ P +
Sbjct: 14 RNALKLHFMNAEEETLVVAKANRLEIYSLTPEGLNLAASCSLFAKVTMLARLPAPANSPT 73
Query: 678 DLLFIITQR 686
D LF+ T R
Sbjct: 74 DHLFVGTDR 82
>gi|116195210|ref|XP_001223417.1| hypothetical protein CHGG_04203 [Chaetomium globosum CBS 148.51]
gi|88180116|gb|EAQ87584.1| hypothetical protein CHGG_04203 [Chaetomium globosum CBS 148.51]
Length = 1127
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 164/540 (30%), Positives = 274/540 (50%), Gaps = 51/540 (9%)
Query: 44 LSFVGHTRVLTLSGAEWGFHLLRGFSSLGSLWNGWSE----RYLLGDLAGRLFMLLLEKE 99
L VG TR+L + E ++ S++ W+E Y L D G L +L L +E
Sbjct: 206 LLVVGETRLLYID--EVTKATVQSALKQASIFVAWAEYNETNYFLADDYGNLHLLTLVRE 263
Query: 100 EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVS 159
+ V +V +G+ S L +L ++FV S GDSQL +L+ +E+ +
Sbjct: 264 SP--DSVVVTSMEVNRIGKTSRASHLVFLGGDMLFVASHYGDSQLFRLDFQ-NEDVPPIQ 320
Query: 160 VMESFTNLAPIIDMVVVDLER-----------QGQGQLVTCSGGFKEGSLRIIRNGIGIE 208
++++ N+ PI+D ++D+ R GQ ++VTCSG K+GSLR +R+G+G+E
Sbjct: 321 LVQTLANIGPILDFAIMDMGRGDEGQQGNEYSSGQARIVTCSGVHKDGSLRSVRSGVGLE 380
Query: 209 EHACI-DLPGIKGIWAL-SIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE-MGGFTS 264
+ + DL +G+++L + +PK N L SF+ TRV EVEE + G T
Sbjct: 381 DVGILADLEHCRGLFSLKTYEAPKT--NILAASFLTETRVFKFDPQGEVEELDSFAGMTF 438
Query: 265 DQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSI-SVVSCNKNQVLCAT 323
+QQT + +LQVTP+A L+ ES + SW P KSI S NK+ +L
Sbjct: 439 NQQTLLARCLSTAQILQVTPAAVTLLDAESGLTIDSWTPGAQKSIISASGNNKSLLLSVD 498
Query: 324 GCDVYYLEVHGSEIKQLAHRALEYE--VACLDISPLSNEETSSEPAKAQLAAVGLWTDIS 381
G ++ + ++ + + + Y+ +AC+ + PL N+ LA VG W+ +
Sbjct: 499 GTELVLFSID-INLRLVRTKEIGYQDQIACIHVPPLRND----------LAVVGFWSSGT 547
Query: 382 ARLLSLPSLEEVCKEPL----GGEIIPRSILMTCF---EGHCYLLVALGDGSMFYFSLDP 434
++ LPSLE + E L IPR + + G L VA+ DG++ F+L
Sbjct: 548 VSIIDLPSLEPMHGEQLRTSPDDASIPRDLALVKLLDNVGGGTLFVAMQDGNVITFNLS- 606
Query: 435 ASGRLTDKKKVTLGTQPT---VLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQ 491
+ RLT +K+V LG + +L + ++FA ++ P++IY S ++V+S V +
Sbjct: 607 ENFRLTGRKRVILGMRQARFHLLPQPDAPHIYSIFATTEHPSLIYGSEGRIVYSAVTAEE 666
Query: 492 VNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
++C + E++PD + LATD+ ID ++ H++ +P+ E RRIAY + FG+
Sbjct: 667 ATYICPFDTEAFPDCIVLATDNQLKISHIDRERRTHVKPLPMNEMVRRIAYSPKEKVFGL 726
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 115/263 (43%), Gaps = 36/263 (13%)
Query: 719 GKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSEN 778
G I++++ R K DLLF+ T+R+ L + L + + +R + S++
Sbjct: 4 GTISILQKLRPKDSKTDLLFVGTERFEYFTLAWNPETSQLHTI-DPFTDPGERHMRDSQS 62
Query: 779 GIIAIIDPEARVIGLRLYNGLFKIIPL-EKDNFELKA--SSIRMEELEIQDVQFLHG-CQ 834
++DP R + + L+ G+ ++ L E+ N A +R+ EL I+ FL+
Sbjct: 63 QDRCLVDPSGRYLAMHLWEGVLTMLRLGERKNKRGLAWMDQVRLSELFIKASTFLYTETG 122
Query: 835 NPTIICIHQ---DVNGRHVKTHEISLKEKEFTKTPWKQDN--------IEMEASLVIPVP 883
+P I ++Q D + T+ +++ ++ + + D + AS++IPV
Sbjct: 123 HPKIAFLYQSRADSADAKLATYRMTIDDRNTEASKFDPDRDREIDTDIPDPSASILIPVR 182
Query: 884 E------------------PLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVD 925
+ +GG +++G+ +LY + V + ++S V +A+
Sbjct: 183 KVEEEVKRHNVRNVESAKAHIGGLLVVGETRLLYIDEVTKATVQSALKQASIFVAWAEY- 241
Query: 926 ANGERYLLGDLAGRLFMLLLEKE 948
N Y L D G L +L L +E
Sbjct: 242 -NETNYFLADDYGNLHLLTLVRE 263
Score = 43.1 bits (100), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 90/217 (41%), Gaps = 40/217 (18%)
Query: 1040 DPNTYFVLGTAVVHPEENEP-------KQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCE 1091
+P F++GT+ + + P +GR+++ D D + ++KGAC +
Sbjct: 784 NPAERFLVGTSFLPDPDYGPGPGPAADARGRLLVLGVDADRNPYLVLSHDLKGACRCLAV 843
Query: 1092 FN--------GKLLASINSTVRLFEW----TNEKELRLECSHFNNIIALFLKVKGDFILV 1139
G ++A + TV + + + EL S+ + + V+G I V
Sbjct: 844 LGEDAGPNAAGLIVAGLTKTVVVCRYDETSSTTAELTRLASYRPSSYPAEIAVRGSTIAV 903
Query: 1140 GDLMRSLTLLQY--------------------KTMEGSFEEISRDYNPNWMTSIEILDDE 1179
DLM+S++L++Y E +R ++ W T++ +++
Sbjct: 904 ADLMKSISLVEYIPAGSSSGSGGGGSGSGESGSDDGPRLVEHARHFSSVWATAVGFVEEG 963
Query: 1180 LFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+L A+ NL + +++ + ED+ ++ ++L
Sbjct: 964 SWLEADAQGNLMVLRRNVEGVTAEDKRRMEVTSEINL 1000
>gi|327301962|ref|XP_003235673.1| UV-damaged DNA binding protein [Trichophyton rubrum CBS 118892]
gi|326461015|gb|EGD86468.1| UV-damaged DNA binding protein [Trichophyton rubrum CBS 118892]
Length = 1147
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 162/499 (32%), Positives = 263/499 (52%), Gaps = 42/499 (8%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRLF L+L +D +V+ KV+ LG S L YLD G+VFVGS
Sbjct: 302 QRWLLADDYGRLFFLML----VLDADNAVESWKVDFLGVTSRASVLVYLDGGIVFVGSHQ 357
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ---------GQGQLVTCS 190
GDSQ++++ E G ++++ +N+API+D ++D+ + GQ ++VT S
Sbjct: 358 GDSQVIQIK----EGG--FDLVQTISNIAPILDFTIMDMGDRSGATREFSSGQTRIVTGS 411
Query: 191 GGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 249
G F +GSLR +R+G+GIEE + + I +WAL P+ +TL++SFV TRV
Sbjct: 412 GAFGDGSLRSVRSGVGIEELGVLASMEHITDLWALRSACPEPFFDTLLVSFVNETRVFHF 471
Query: 250 SG-AEVEETEMG--GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARV--SSWEPP 304
S +VEE E G G + T N+ +LQVT S + I +S + SS+E
Sbjct: 472 SADGDVEEKEDGFLGLVFSESTLLATNIPGNRILQVTESISRAIDVDSGMIIWRSSYEE- 530
Query: 305 NGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSS 364
+I+ S N + ++ G + + S + + R E + + +S +
Sbjct: 531 --FTITSASANDDYLVLVLG-GTRLVCISLSTFELVGSRDFEAD------NQVSGMTIPA 581
Query: 365 EPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMTCF--EGHCYLLV 420
P +A + + +I +L LP LE K+ LG GE IPRS+++ L V
Sbjct: 582 SPIQACIVCLPQSAEII--ILDLPGLEVKNKQTLGEPGEAIPRSVIVAEILPNKPPTLFV 639
Query: 421 ALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
++ DG++F FS D + + + K+TLG+ QP+ K R NVFA D P++I++S
Sbjct: 640 SMADGTVFSFSFDVHAFAIFNSSKITLGSEQPSFKKLPRGNGQYNVFATCDHPSLIHASE 699
Query: 480 HKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRR 539
++V+S V+ + +CSLN ++YP S+AL++ +DE + I T+P+ + RR
Sbjct: 700 GRIVYSAVDSASASRICSLNTQAYPGSIALSSQHELKIAIVDEERTTQIHTLPMHASVRR 759
Query: 540 IAYQESSQTFGVITTRIDI 558
+AY + + FG+ T + I
Sbjct: 760 LAYSPTEKAFGLGTVKRKI 778
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK----KDLLFIITQRYNA 746
LVVAK NR+E++T + +GL +YG++ ++K T D LF+ T +Y
Sbjct: 29 LVVAKANRLELYTQSADGLVLQHSKAIYGRVTLLKKLPRSTAAGLALTDALFVGTDQYAY 88
Query: 747 MILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE 806
+ + L K + +++D + + + IDP + L +Y G+ I PL
Sbjct: 89 FSITWDPVHEQLRTERK-YIDLADGSLREAHSDDRCQIDPSGSFLTLEVYEGVVSIFPLV 147
Query: 807 KDNFELKAS---------------------SIRMEELEIQDVQFL--HGCQNPTIICIHQ 843
+ +A +R+EEL ++ FL P +++
Sbjct: 148 TADSHKRAKSAVSASAFSASTSVEQLGEPLQVRIEELMVRSSAFLDQEASNTPRFALLYE 207
Query: 844 DVNGR-HVKTHEISLKEKEFTKTPWK----------QDNIEMEASLVIPVPEPLGGAIII 892
D G+ +K ++ T P D +++ AS++IPVP PLGG +II
Sbjct: 208 DTQGKVRLKLRDLKYTHAIITSDPGSAAELKDVTTLSDEVDLGASILIPVPRPLGGLLII 267
Query: 893 GQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMD 952
G+ SI Y ++ + +S+ V + +VD G+R+LL D GRLF L+L +D
Sbjct: 268 GESSIKYVDVSRNETISRPLAESTVFVAWEQVD--GQRWLLADDYGRLFFLML----VLD 321
Query: 953 GTFSVKEPKVELLGEHCKGPVV 974
+V+ KV+ LG + V+
Sbjct: 322 ADNAVESWKVDFLGVTSRASVL 343
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 24/251 (9%)
Query: 985 GSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF--GED-- 1040
G+ K+ +N +E + ++ D+ F L + L P E +I S+ G+D
Sbjct: 772 GTVKRKISN-----GVEEVSSSFVLADEILFRPLSTYDLRPDELVECVIRSQLNHGKDEV 826
Query: 1041 ----PNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGK 1095
F +GTA + ++ +GRI++F + + L I EK + GAC ++ +
Sbjct: 827 GNSISKDLFFVGTAFLDDVGDDHIRGRILVFEVNRSRELSLIVEKSLMGACRTLAVMDHT 886
Query: 1096 LL-ASINSTVRLFEWTNEK----ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQ 1150
LL A + +V +F+ ++ L ++ + + + V GD + V D+M+S++L+Q
Sbjct: 887 LLVAGLVKSVSVFKLARDRFGNILLEKHTAYRTSTAPIDISVVGDTVAVADVMKSMSLVQ 946
Query: 1151 YKTME-----GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDR 1205
Y E FEEI+R Y W T++ +++ ++L A+ NL + Q++ ++ DR
Sbjct: 947 YTQAEEGEREPKFEEIARHYQTLWSTAVAPIEENVYLLADAEGNLVVLQQNITGVTESDR 1006
Query: 1206 THLQEVGTVHL 1216
LQ + L
Sbjct: 1007 KRLQPTSEIRL 1017
Score = 47.4 bits (111), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSG 57
+GSLR +R+G+GIEE + + I +WAL P+ +TL++SFV TRV S
Sbjct: 416 DGSLRSVRSGVGIEELGVLASMEHITDLWALRSACPEPFFDTLLVSFVNETRVFHFSA 473
>gi|317031116|ref|XP_001392900.2| UV-damaged DNA binding protein [Aspergillus niger CBS 513.88]
Length = 1124
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/521 (29%), Positives = 270/521 (51%), Gaps = 45/521 (8%)
Query: 72 GSLWNGW----SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
+++ W S+R+LL D GRLF L+L +D V+ K++ LG + L Y
Sbjct: 268 ATIFVAWEQVDSQRWLLADDYGRLFFLML----VLDSNNQVQSWKLDHLGNTARASVLIY 323
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ- 181
L GV+FVGS GDSQ++++ NG+ + V+++ +N+API+D ++DL E Q
Sbjct: 324 LGGGVIFVGSHQGDSQVLRIG-----NGS-LEVIQTLSNIAPILDFTIMDLGNRTSESQT 377
Query: 182 -----GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNT 235
GQ ++VT SG F +G+LR +R+G+G+EE + ++ I ++ L + + +T
Sbjct: 378 HEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGEMELITDLFGLQLATKGGYLDT 437
Query: 236 LVLSFVGHTRVLTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
L+++FV TRV + EVEE + G + + T N+ +LQVT ++ E
Sbjct: 438 LLVTFVDETRVFQFNFDGEVEELDSFLGLSLSENTLLAMNLPGGRILQVTEQRVLIADIE 497
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLD 353
+ W PP+ I+ S N + ++ +G + + ++++ ++ + +
Sbjct: 498 GGMVTNEWTPPDNLVITSASANNDSIVLVSGGQLMTVLDINNDVRVISQKDFGADSQISG 557
Query: 354 IS-PLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT 410
++ PLS+ A + VG +L L L E+ LG GE PRS+L+
Sbjct: 558 VTVPLSS---------AGVCIVGFPQLAKVSVLDLGRLSELHTTSLGPAGEAFPRSVLVA 608
Query: 411 CFEGHC--YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFA 467
+ L +++ DGS+ +S D + LT ++ LG+ QPT K R NVFA
Sbjct: 609 DVLANSPSTLFISMADGSVITYSFDARNYSLTGMNRLILGSEQPTFKKLPRGDGLYNVFA 668
Query: 468 CSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLH 527
+ P++IY S ++++S VN + +C N+E+YP S+A+AT +D+ +
Sbjct: 669 TCENPSLIYGSEGRIIYSAVNSEGASRVCHFNSEAYPGSIAVATRHDLKIALVDKERTTQ 728
Query: 528 IRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVR 568
I+T+P+GE RR+AY S + FG+ T I+ + DG+ V+
Sbjct: 729 IQTLPMGETARRVAYSPSEKAFGIGT--IERKLKDGAEMVQ 767
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 143/302 (47%), Gaps = 27/302 (8%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-KDLLFIITQRYNAMIL 749
LVVAK NR+EI+++TPEGL L+ K+ ++ P + D LF+ T RY L
Sbjct: 29 LVVAKANRLEIYSLTPEGLNLAASCSLFAKVTMLARLPAPANSPTDHLFVGTDRYTYCTL 88
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
G+ + + + + ++SD + ++ G +IDP R + L +Y G+ ++P+ +
Sbjct: 89 SWDGERNQIRT-ERNYVDISDPSSREAQTGNRCLIDPSGRFMTLEVYEGVIAVVPIVQ-- 145
Query: 810 FELKASSIRMEELEIQDVQFLHGCQNPT------IICIHQDVNGRHVKTHEISLKEKEFT 863
K ++ D + PT ++ + + N + V+ +L T
Sbjct: 146 LPSKKRGRQVAPPSGPDAPRVGELGEPTTARIDELLALLYEDNQKKVRLKVRALHYSAAT 205
Query: 864 KTPWK-----------QDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQI 912
+ +++ AS +IPVP PLGG +++G+ SI Y S V+ +
Sbjct: 206 ASTGADAAFEESLDGFSQELDLGASHLIPVPAPLGGLLVLGETSIKYVDTDSNEIVSRPL 265
Query: 913 IKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGP 972
+++ V + +VD+ +R+LL D GRLF L+L +D V+ K++ LG +
Sbjct: 266 DEATIFVAWEQVDS--QRWLLADDYGRLFFLML----VLDSNNQVQSWKLDHLGNTARAS 319
Query: 973 VV 974
V+
Sbjct: 320 VL 321
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 117/227 (51%), Gaps = 17/227 (7%)
Query: 1007 LLIIDQNTFEILHAHQLFPGEYALSLISSKF--GEDPN------TYFVLGTAVVHPEENE 1058
++ D+ F L A L P E S+I ++F G+D N FV+GTA + E E
Sbjct: 770 FVLADEIMFRRLDAFDLRPEELVESVIRAEFSAGKDENGRDVFKDRFVVGTAYLDDENEE 829
Query: 1059 PKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK--EL 1115
+GRI++F D+G KL ++AE +KGAC ++ K++A++ TV ++ N +
Sbjct: 830 SIRGRILVFEIDNGRKLTKVAELPVKGACRALAMLGEKIVAALVKTVVIYGVVNNDFGAM 889
Query: 1116 RLE--CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEISRDYNPNW 1169
+LE S+ + + + V G+ I V DLM+S+ L++Y E S E++R + W
Sbjct: 890 KLEKLASYRTSTAPVDVTVTGNVIAVADLMKSVCLVEYSEGENGSPDSLTEVARHFQTVW 949
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
T + + + FL + NL + +++ ++D+ L+ G + L
Sbjct: 950 ATGVSCIAKDTFLETDAEGNLIVLRRNLTGVEEDDKRRLEVTGEISL 996
Score = 46.6 bits (109), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 619 QNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-K 677
+N + +F ++ + LVVAK NR+EI+++TPEGL L+ K+ ++ P +
Sbjct: 14 RNALKLHFMNAEEEALVVAKANRLEIYSLTPEGLNLAASCSLFAKVTMLARLPAPANSPT 73
Query: 678 DLLFIITQR 686
D LF+ T R
Sbjct: 74 DHLFVGTDR 82
>gi|134077422|emb|CAK45676.1| unnamed protein product [Aspergillus niger]
Length = 1133
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/521 (29%), Positives = 270/521 (51%), Gaps = 45/521 (8%)
Query: 72 GSLWNGW----SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
+++ W S+R+LL D GRLF L+L +D V+ K++ LG + L Y
Sbjct: 268 ATIFVAWEQVDSQRWLLADDYGRLFFLML----VLDSNNQVQSWKLDHLGNTARASVLIY 323
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ- 181
L GV+FVGS GDSQ++++ NG+ + V+++ +N+API+D ++DL E Q
Sbjct: 324 LGGGVIFVGSHQGDSQVLRIG-----NGS-LEVIQTLSNIAPILDFTIMDLGNRTSESQT 377
Query: 182 -----GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNT 235
GQ ++VT SG F +G+LR +R+G+G+EE + ++ I ++ L + + +T
Sbjct: 378 HEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGEMELITDLFGLQLATKGGYLDT 437
Query: 236 LVLSFVGHTRVLTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
L+++FV TRV + EVEE + G + + T N+ +LQVT ++ E
Sbjct: 438 LLVTFVDETRVFQFNFDGEVEELDSFLGLSLSENTLLAMNLPGGRILQVTEQRVLIADIE 497
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLD 353
+ W PP+ I+ S N + ++ +G + + ++++ ++ + +
Sbjct: 498 GGMVTNEWTPPDNLVITSASANNDSIVLVSGGQLMTVLDINNDVRVISQKDFGADSQISG 557
Query: 354 IS-PLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT 410
++ PLS+ A + VG +L L L E+ LG GE PRS+L+
Sbjct: 558 VTVPLSS---------AGVCIVGFPQLAKVSVLDLGRLSELHTTSLGPAGEAFPRSVLVA 608
Query: 411 CFEGHC--YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFA 467
+ L +++ DGS+ +S D + LT ++ LG+ QPT K R NVFA
Sbjct: 609 DVLANSPSTLFISMADGSVITYSFDARNYSLTGMNRLILGSEQPTFKKLPRGDGLYNVFA 668
Query: 468 CSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLH 527
+ P++IY S ++++S VN + +C N+E+YP S+A+AT +D+ +
Sbjct: 669 TCENPSLIYGSEGRIIYSAVNSEGASRVCHFNSEAYPGSIAVATRHDLKIALVDKERTTQ 728
Query: 528 IRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVR 568
I+T+P+GE RR+AY S + FG+ T I+ + DG+ V+
Sbjct: 729 IQTLPMGETARRVAYSPSEKAFGIGT--IERKLKDGAEMVQ 767
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 117/227 (51%), Gaps = 17/227 (7%)
Query: 1007 LLIIDQNTFEILHAHQLFPGEYALSLISSKF--GEDPN------TYFVLGTAVVHPEENE 1058
++ D+ F L A L P E S+I ++F G+D N FV+GTA + E E
Sbjct: 770 FVLADEIMFRRLDAFDLRPEELVESVIRAEFSAGKDENGRDVFKDRFVVGTAYLDDENEE 829
Query: 1059 PKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK--EL 1115
+GRI++F D+G KL ++AE +KGAC ++ K++A++ TV ++ N +
Sbjct: 830 SIRGRILVFEIDNGRKLTKVAELPVKGACRALAMLGEKIVAALVKTVVIYGVVNNDFGAM 889
Query: 1116 RLE--CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEISRDYNPNW 1169
+LE S+ + + + V G+ I V DLM+S+ L++Y E S E++R + W
Sbjct: 890 KLEKLASYRTSTAPVDVTVTGNVIAVADLMKSVCLVEYSEGENGSPDSLTEVARHFQTVW 949
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
T + + + FL + NL + +++ ++D+ L+ G + L
Sbjct: 950 ATGVSCIAKDTFLETDAEGNLIVLRRNLTGVEEDDKRRLEVTGEISL 996
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 142/302 (47%), Gaps = 27/302 (8%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-KDLLFIITQRYNAMIL 749
LVVA NR+EI+++TPEGL L+ K+ ++ P + D LF+ T RY L
Sbjct: 29 LVVALANRLEIYSLTPEGLNLAASCSLFAKVTMLARLPAPANSPTDHLFVGTDRYTYCTL 88
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
G+ + + + + ++SD + ++ G +IDP R + L +Y G+ ++P+ +
Sbjct: 89 SWDGERNQIRT-ERNYVDISDPSSREAQTGNRCLIDPSGRFMTLEVYEGVIAVVPIVQ-- 145
Query: 810 FELKASSIRMEELEIQDVQFLHGCQNPT------IICIHQDVNGRHVKTHEISLKEKEFT 863
K ++ D + PT ++ + + N + V+ +L T
Sbjct: 146 LPSKKRGRQVAPPSGPDAPRVGELGEPTTARIDELLALLYEDNQKKVRLKVRALHYSAAT 205
Query: 864 KTPWK-----------QDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQI 912
+ +++ AS +IPVP PLGG +++G+ SI Y S V+ +
Sbjct: 206 ASTGADAAFEESLDGFSQELDLGASHLIPVPAPLGGLLVLGETSIKYVDTDSNEIVSRPL 265
Query: 913 IKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGP 972
+++ V + +VD+ +R+LL D GRLF L+L +D V+ K++ LG +
Sbjct: 266 DEATIFVAWEQVDS--QRWLLADDYGRLFFLML----VLDSNNQVQSWKLDHLGNTARAS 319
Query: 973 VV 974
V+
Sbjct: 320 VL 321
Score = 43.9 bits (102), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 619 QNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-K 677
+N + +F ++ + LVVA NR+EI+++TPEGL L+ K+ ++ P +
Sbjct: 14 RNALKLHFMNAEEEALVVALANRLEIYSLTPEGLNLAASCSLFAKVTMLARLPAPANSPT 73
Query: 678 DLLFIITQR 686
D LF+ T R
Sbjct: 74 DHLFVGTDR 82
>gi|449295711|gb|EMC91732.1| hypothetical protein BAUCODRAFT_116696 [Baudoinia compniacensis
UAMH 10762]
Length = 1148
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 157/545 (28%), Positives = 274/545 (50%), Gaps = 59/545 (10%)
Query: 47 VGHTRVLTLSGAEWGFHLLRGFS-SLGSLWNGW----SERYLLGDLAGRLFMLLLEKEEK 101
VG TR+ + EW + + +++ W +RY+L D G+L++L + +
Sbjct: 261 VGETRIAYVD--EWEYRITDTQPLDEATIFVAWCAVDEQRYVLADDYGKLYLLFVLQ--- 315
Query: 102 MDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVM 161
+ T ++++LG+ S L YLD G +FVGS GDSQ+++++ E V+
Sbjct: 316 -NNTGEYAGHRLDILGQTSRANTLVYLDAGRIFVGSHQGDSQVIQISEQSME------VV 368
Query: 162 ESFTNLAPIIDMVVVDLERQ-----------GQGQLVTCSGGFKEGSLRIIRNGIGIEEH 210
++F N+API+D ++D+ + GQ ++VT SG +K+GSLR +R+G+G+E+
Sbjct: 369 QTFANIAPILDFTIMDMGNRSSDAPVNEFSSGQARIVTGSGAYKDGSLRSVRSGVGLEDV 428
Query: 211 ACIDLPG--IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE-MGGFTSDQ 266
I G + +++L + +TLV+ FV +TRV EVEE + +GGF
Sbjct: 429 GSIGEMGAPVSAMFSLRSSPESHFVDTLVVGFVSYTRVFRFDVDGEVEEVDHLGGFELAA 488
Query: 267 QTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCAT-GC 325
+ Y GN ++QVT SA I+ TE++ SSW P+G+SI+ V+ + +L + G
Sbjct: 489 ASLYAGNTSDGRIVQVTGSAVIVSHTETRTITSSWSLPDGRSITAVAAEGDSLLVSIGGA 548
Query: 326 DVYYLEVHGSEIKQLAHRAL-----EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
++ L++ ++L R E +V+C+ +S A + VG W +
Sbjct: 549 ELVVLDLSNVSSERLEARTRRTFESEEQVSCIALS----------KAVRDVCVVGFWQES 598
Query: 381 SARLLSLPSLEEVCKEPLGGEI----IPRSILMTCF--EGHCYLLVALGDGSMFYFSLDP 434
LSL L+ + E + +PRS+++ + L V L DG++ +++
Sbjct: 599 RVAFLSLHDLQPIATERVADSFDTSAVPRSVVLANILQDAPPTLFVGLADGNVVTYTVQS 658
Query: 435 ASGRLTDKKKVTLGTQP---TVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQ 491
T +K LGTQ T+L + NVFA + P++IY + V+S V
Sbjct: 659 PQQPFTSRKSTILGTQQANFTLLPRGDGV-LDNVFATCEHPSLIYGQEGRTVYSAVTAET 717
Query: 492 VNHMCSLNAESYPDSLALAT-DSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFG 550
+CS ++E+Y ++A+AT + +DE + H++T+ +GE RRIAY + FG
Sbjct: 718 AQSICSFDSEAYSGAIAIATEEGELKLAMVDEERTTHVQTLRVGETVRRIAYSTELKAFG 777
Query: 551 VITTR 555
+ T +
Sbjct: 778 LGTIK 782
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 48/298 (16%)
Query: 687 TDLNLVVAKNNRIEIHTVTPEGLRPVKEIF---LYGKIAVMKFFRGPTDKKDLLFIITQR 743
T +L+VAK NR+EI++ P + + LYGK+ ++ R T + D LF+ T
Sbjct: 25 TSSDLIVAKANRLEIYSPNPHQPDQLSLQYTRSLYGKVTLLHKLRPATSQTDHLFVGTDH 84
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
Y+ L L K++ +++++ + S+ G IDP +R + L Y G+ ++
Sbjct: 85 YHYFTLSWDASTKQLRT-EKSYVDIAEKSARDSQTGDRVHIDPTSRFLSLECYEGVINVL 143
Query: 804 PL-EKDNFELKASS-----------IRMEELEIQDVQFLHGCQ------NPTIICIHQDV 845
P+ + KA+ +R+ EL ++ F+H Q NP + + +D
Sbjct: 144 PIAHAGKGKRKAADNEIGELQDPIPVRIPELFVRSTCFVHKRQAGSKLANPELAVLWED- 202
Query: 846 NGRHVKTHEISLKEKEFTKTPW-----------------KQDNIEMEASLVIPVPEPLGG 888
T+++ LK +E TP Q IE+ AS +IP+P P+ G
Sbjct: 203 -----STNKVRLKVRELEFTPSLRPAEEPPTAELEKGKDAQGEIELGASHLIPLPPPMYG 257
Query: 889 AIIIGQESILYHSGKSYVAVAPQIIKSSTI-VCYAKVDANGERYLLGDLAGRLFMLLL 945
+++G+ I Y Y Q + +TI V + VD +RY+L D G+L++L +
Sbjct: 258 MLVVGETRIAYVDEWEYRITDTQPLDEATIFVAWCAVDE--QRYVLADDYGKLYLLFV 313
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 116/231 (50%), Gaps = 15/231 (6%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT-----YFVLGTAVVHPEENEPKQGR 1063
++D+ F+ LH L E ++ + + T FV+GTA + + +GR
Sbjct: 798 LVDEVAFQELHTVALNEDELVECVMRCQLDDGSGTGETAERFVVGTAYLDDAPQQQTKGR 857
Query: 1064 IIIFHY-DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLF--EWTNEKE--LRLE 1118
I++ ++ +L+ +AE +KGAC + G+++A++ TV ++ E+ L +
Sbjct: 858 ILVLEVTEERRLKVVAELGLKGACRCLAVVLGRIVAALVKTVVIYALEYQTPSHPFLVKK 917
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEISRDYNPNWMTSIE 1174
++ + + + V G I V DLM+S++L+ YK G + EI+R Y W T+I
Sbjct: 918 AAYRTSTAPIDICVTGSTIAVTDLMKSVSLVSYKPGRGGVPDTLSEIARHYETLWGTAIA 977
Query: 1175 ILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLVQCR 1225
+ + +L A+ NL + Q + SDEDR L+ V + L+G+ + + R
Sbjct: 978 NVAENTYLEADAEGNLVVLQHEVNGYSDEDRRRLRPVSEM-LLGEMVNRIR 1027
>gi|67516629|ref|XP_658200.1| hypothetical protein AN0596.2 [Aspergillus nidulans FGSC A4]
gi|40747539|gb|EAA66695.1| hypothetical protein AN0596.2 [Aspergillus nidulans FGSC A4]
gi|259489136|tpe|CBF89158.1| TPA: damaged DNA binding protein (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 1132
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 161/508 (31%), Positives = 259/508 (50%), Gaps = 48/508 (9%)
Query: 72 GSLWNGW----SERYLLGDLAGRLF--MLLLEKEEKMDGTFSVKEPKVELLGEISIPECL 125
+++ W S+R+LL D GRLF ML+L E V+ ++ LG S L
Sbjct: 283 ATIFVAWEQVDSQRWLLADDYGRLFFLMLVLRNSE-------VERWELHSLGNTSRASVL 335
Query: 126 TYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ER 180
YL GVVFVGS GDSQ++++ D++ V+++ +N+AP++D ++DL E
Sbjct: 336 VYLGGGVVFVGSHQGDSQVIRIG---DQS---FQVIQTLSNIAPVLDFTIMDLGNRTSEN 389
Query: 181 Q------GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLD 233
Q GQ ++VT SG F +G+LR +R+G+G+EE + D+ I +W L +GS +
Sbjct: 390 QMHEFSSGQARIVTGSGAFDDGTLRSVRSGVGLEELGVLGDMEHITDLWGLQVGSRGDFL 449
Query: 234 NTLVLSFVGHTRVLTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
+TL+++FV TRV S E EE E G + + T N+ +LQVT ++
Sbjct: 450 DTLLVTFVNETRVFRFSPDGEAEELESFLGLSLSENTLLAANLPGSRILQVTEQRVLIAD 509
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQ-VLCATGCDVYYLEVHGSEIKQLAHRALEYEVA 350
E + W P N I+ S N + VL A G V L++ SE + ++ + A
Sbjct: 510 IECGMTIFEWTPKNQLIITAASANDDTIVLVAGGKHVTVLDIQ-SEARVVSEKDFG---A 565
Query: 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSIL 408
IS ++ T ++ + VG +L L L + LG GE PRS+L
Sbjct: 566 DNQISGVTLPTTPTD-----VCIVGFPQLAKVSVLKLQDLSHISSTSLGPAGEAFPRSVL 620
Query: 409 MTCF--EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNV 465
+ E L +++ DGS+ + + L+ K+ LG+ QPT K R +NV
Sbjct: 621 VASVLAENAPTLFISMADGSVITYDYNDQDHSLSGMNKLVLGSEQPTFKKLPRGNGLSNV 680
Query: 466 FACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQK 525
FA + P++IY S ++++S VN + +C N+E+YP+S+A+AT G +D+ +
Sbjct: 681 FATCENPSLIYGSEGRIIYSAVNSEGASRICHFNSEAYPESIAVATAQELKIGLVDKERT 740
Query: 526 LHIRTVPLGEAPRRIAYQESSQTFGVIT 553
I+T+P+ RR+AY S + FG+ T
Sbjct: 741 TQIQTLPIKATVRRVAYSPSEKAFGMGT 768
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 154/330 (46%), Gaps = 46/330 (13%)
Query: 688 DLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-KDLLFIITQRYNA 746
D LVVAK N++E ++VTP+GL V ++ ++ ++ P + D LF+ T RY+
Sbjct: 26 DECLVVAKANQLEFYSVTPDGLALVTSCSIFARVTMLACLPAPANSPTDHLFVGTDRYSY 85
Query: 747 MILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE 806
L + + + + +++D + + G +IDP R + L +Y+G+ +IP+
Sbjct: 86 FTLSWDSARNQVRT-ERDYVDIADPSSRDARTGSRCMIDPSGRFMTLEIYDGMIVVIPII 144
Query: 807 KDNFELKASSI--------------------RMEELEIQDVQFLH-GCQNPTIICIHQDV 845
+ + + + R++EL ++ FLH +P + +++D
Sbjct: 145 QLPSKRRGRQVALPTGPDAPRIGELGEPIITRIDELFVRSSAFLHVQAGSPRLALLYED- 203
Query: 846 NGRHVKTHEISLK-------EKEFTKTPWKQDNIEMEASLVIPVPEPL---GGAIIIGQE 895
N + VK LK E EFT +++ AS +IPVP PL GG +I+G+
Sbjct: 204 NQKKVKLKVRELKYSTAAGAESEFTSIADYAQELDLGASHLIPVPAPLAAAGGLLILGET 263
Query: 896 SILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTF 955
SI Y + V+ + +++ V + +VD+ +R+LL D GRLF L+L
Sbjct: 264 SIKYVDADNNEIVSQPLEEATIFVAWEQVDS--QRWLLADDYGRLFFLML---------- 311
Query: 956 SVKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
++ +VE H G S L Y+ G
Sbjct: 312 VLRNSEVERWELHSLGNTSRASVLVYLGGG 341
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 113/229 (49%), Gaps = 14/229 (6%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLI-----SSKFGEDPNTYFVLGTAVVHPE 1055
E+ ++ D+ F L A L E +I SK GE + FV+G+A + +
Sbjct: 778 EIVKSQFVLADEILFRRLDAFDLEGEEIVECVIRAEAPESKDGEAKDR-FVVGSAYLGED 836
Query: 1056 ENEPKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK- 1113
+ + G I +F D+G KL ++A++ +KGAC ++ K++A++ TV +F+
Sbjct: 837 DGDSTLGYIRVFEVDNGRKLAKVAQERVKGACRALAVMGDKIVAALVKTVVVFQVVPRSG 896
Query: 1114 --ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEISRDYNP 1167
+L+ S+ + + + V + I + DLM+S+ +++Y E E++R +
Sbjct: 897 GLQLQRLASYRTSTAPVDITVTRNVIAIADLMKSVCVVEYHEGENGAPDKLVEVARHFQT 956
Query: 1168 NWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
W T + + + +L ++ NL + +++ + ++DR L+ G + L
Sbjct: 957 VWATGVTSVAPDTYLESDAEGNLIVLRRNRSGVEEDDRRRLEVTGEICL 1005
Score = 48.1 bits (113), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+G+LR +R+G+G+EE + D+ I +W L +GS + +TL+++FV TRV S
Sbjct: 410 DGTLRSVRSGVGLEELGVLGDMEHITDLWGLQVGSRGDFLDTLLVTFVNETRVFRFS 466
>gi|358366432|dbj|GAA83053.1| UV-damaged DNA binding protein [Aspergillus kawachii IFO 4308]
Length = 1643
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 155/510 (30%), Positives = 265/510 (51%), Gaps = 41/510 (8%)
Query: 79 SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSR 138
S+R+LL D GRLF L+L +D V+ K++ LG + L YL GV+FVGS
Sbjct: 235 SQRWLLADDYGRLFFLML----VLDSNNQVQSWKLDHLGNTARASVLIYLGGGVIFVGSH 290
Query: 139 LGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ------GQGQLV 187
GDSQ++++ NG+ + V+++ +N+API+D ++DL E Q GQ ++V
Sbjct: 291 QGDSQVLRIG-----NGS-LEVIQTLSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIV 344
Query: 188 TCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRV 246
T SG F +G+LR +R+G+G+EE + ++ I ++ L + + +TL+++FV TRV
Sbjct: 345 TGSGAFDDGTLRSVRSGVGMEELGVLGEMELITDLFGLQLATKGGYLDTLLVTFVDETRV 404
Query: 247 LTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
+ EVEE + G + + T N+ +LQVT ++ E + W PP
Sbjct: 405 FQFNFDGEVEELDSFLGLSLSENTLLAMNLPGGRILQVTEQRVLIADIEGGMVTNEWTPP 464
Query: 305 NGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDIS-PLSNEETS 363
+ I+ S N + ++ +G + + ++++ +A + + ++ PLS+
Sbjct: 465 DRLVITSASANNDSIVLVSGGQILTVLDINNDVRVVAQKDFGADSQISGVTVPLSS---- 520
Query: 364 SEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT--CFEGHCYLL 419
A + VG +L L L E+ LG GE PRS+L+ L
Sbjct: 521 -----AGVCIVGFPQLAKVSVLDLGRLSELHTTSLGPAGEAFPRSVLVADVLANSPSTLF 575
Query: 420 VALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYSS 478
+++ DGS+ ++ D + LT ++ LG+ QPT K R NVFA + P++IY S
Sbjct: 576 ISMADGSVITYAFDASDYSLTGMNRLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGS 635
Query: 479 NHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPR 538
++++S VN + +C N+E+YP S+A+AT +D+ + I+T+P+GE R
Sbjct: 636 EGRIIYSAVNSEGASRVCHFNSEAYPGSIAVATKHDLKIALVDKERTTQIQTLPMGETAR 695
Query: 539 RIAYQESSQTFGVITTRIDIQEADGSTPVR 568
R+AY S + FG+ T I+ + DG+ V+
Sbjct: 696 RVAYSPSEKAFGIGT--IERKLKDGAEMVQ 723
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 117/227 (51%), Gaps = 17/227 (7%)
Query: 1007 LLIIDQNTFEILHAHQLFPGEYALSLISSKF--GEDPN------TYFVLGTAVVHPEENE 1058
++ D+ F L A L P E S+I ++F G+D N FV+GTA + E E
Sbjct: 726 FVLADEIMFRRLDAFDLRPEELVESVIRAEFSAGKDENGRDVFKDRFVVGTAYLDDENEE 785
Query: 1059 PKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK--EL 1115
+GRI++F D+G KL ++AE +KGAC ++ K++A++ TV ++ N +
Sbjct: 786 SIRGRILVFEIDNGRKLTKVAELPVKGACRALAMLGEKIVAALVKTVVIYGVVNNDFGAM 845
Query: 1116 RLE--CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT----MEGSFEEISRDYNPNW 1169
+LE S+ + + + V G+ I + DLM+S+ L++Y M S E++R + W
Sbjct: 846 KLEKLASYRTSTAPVDVTVTGNVIAIADLMKSVCLVEYSEGENGMPDSLTEVARHFQTVW 905
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
T + + + FL + NL + +++ ++D+ L+ G + L
Sbjct: 906 ATGVVCIAKDTFLETDAEGNLIVLRRNLTGVEEDDKRRLEVTGEISL 952
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 41/276 (14%)
Query: 730 PTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEAR 789
PTD LF+ T RY L G+ + + + + ++SD + ++ G +IDP R
Sbjct: 12 PTDH---LFVGTDRYTYCTLSWDGERNQIRT-ERNYVDISDPSSREAQTGNRCLIDPSGR 67
Query: 790 VIGLRLYNGLFKIIPL-----EKDNFEL---------------KASSIRMEELEIQDVQF 829
+ L +Y G+ ++P+ +K ++ + ++ R++EL ++ F
Sbjct: 68 FMTLEVYEGVIAVVPIVQLPSKKRGRQVAPPSGPDAPRVGELGEPTTARIDELFVRSSAF 127
Query: 830 LHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTPWK-----------QDNIEMEASL 878
LH P + + + N + V+ +L T + +++ AS
Sbjct: 128 LHVQSGPPRLALLYEDNQKKVRLKVRALHYSAATSSTGADAAFEESLDGFSQELDLGASH 187
Query: 879 VIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAG 938
+IPVP PLGG +++G+ SI Y S V+ + +++ V + +VD+ +R+LL D G
Sbjct: 188 LIPVPAPLGGLLVLGETSIKYVDTDSNEIVSRPLDEATIFVAWEQVDS--QRWLLADDYG 245
Query: 939 RLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVV 974
RLF L+L +D V+ K++ LG + V+
Sbjct: 246 RLFFLML----VLDSNNQVQSWKLDHLGNTARASVL 277
>gi|302655264|ref|XP_003019424.1| hypothetical protein TRV_06556 [Trichophyton verrucosum HKI 0517]
gi|291183145|gb|EFE38779.1| hypothetical protein TRV_06556 [Trichophyton verrucosum HKI 0517]
Length = 1027
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 162/499 (32%), Positives = 261/499 (52%), Gaps = 42/499 (8%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRLF L+L +D +V KV+ LG S L YLD G+VFVGS
Sbjct: 302 QRWLLADDYGRLFFLML----VLDAENAVDTWKVDFLGVTSRASVLVYLDGGIVFVGSHQ 357
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ---------GQGQLVTCS 190
GDSQ++++ E G ++++ +N+API+D V+D+ + GQ ++VT S
Sbjct: 358 GDSQVIQIK----EGG--FDLVQTISNIAPILDFTVMDMGDRSGATREFSSGQTRIVTGS 411
Query: 191 GGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 249
G F +GSLR +R+G+GIEE + + I +W L P+ +TL++SFV TRV
Sbjct: 412 GAFGDGSLRSVRSGVGIEELGVLASMEHITDLWTLRSACPEPFLDTLLVSFVNETRVFHF 471
Query: 250 SG-AEVEETEMG--GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARV--SSWEPP 304
S +VEE E G G Q T N+ ++QVT S + I +S + SS+E
Sbjct: 472 SADGDVEEKEDGFLGLVFSQSTLLATNIPGNRIIQVTESTSRAIDVDSGMIIWRSSYEE- 530
Query: 305 NGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSS 364
+I+ S N + ++ G + + + S + + R E + + +S +
Sbjct: 531 --FTITSASANDDYLVLVLG-GIRLVCMSLSTFELVGSRDFEAD------NQVSGMTIPA 581
Query: 365 EPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMTCF--EGHCYLLV 420
P +A + + +I +L LP LE K+ LG GE IPRS+++ L V
Sbjct: 582 SPTQACIVCLPQSAEII--ILDLPELEVKNKQALGEPGEAIPRSVIVAEILPNKPPTLFV 639
Query: 421 ALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
++ DG++F FS D + L + K+TLG+ QP+ + R NVFA D P++I++S
Sbjct: 640 SMADGTVFSFSFDVHAFSLFNSSKITLGSEQPSFKELPRGNGQYNVFATCDHPSLIHASE 699
Query: 480 HKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRR 539
++V+S V+ + +CSLN ++YP S+AL++ +DE + I T+P+ + RR
Sbjct: 700 GRIVYSAVDSASASRICSLNTQAYPGSIALSSQHELKIAIVDEERTTQIHTLPMHASVRR 759
Query: 540 IAYQESSQTFGVITTRIDI 558
+AY + FG+ T + I
Sbjct: 760 LAYSPMEKAFGLGTVKRKI 778
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 143/322 (44%), Gaps = 45/322 (13%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFF----RGPTDKKDLLFIITQRYNA 746
LVVAK NR+E++T + +GL +YG++ ++K G D LF+ T +Y
Sbjct: 29 LVVAKANRLELYTQSADGLVLQHSKAIYGRVTLLKKLPRSTAGGLALTDALFVGTDQYAY 88
Query: 747 MILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE 806
+ + L K + +++D + + + IDP + L +Y G+ I PL
Sbjct: 89 FSITWDPVHEQLRTERK-YIDLADGSLREAHSDDRCQIDPSGSFLTLEVYEGVVSIFPLV 147
Query: 807 KDNFELKAS---------------------SIRMEELEIQDVQFL--HGCQNPTIICIHQ 843
+ +A +R+EEL ++ FL P +++
Sbjct: 148 TADSHKRAKSAVSASASSASTSVEQLGEPLQVRIEELMVRSSAFLDQEASNTPRFALLYE 207
Query: 844 DVNGR-HVKTHEISLKEKEFTKTPWK----------QDNIEMEASLVIPVPEPLGGAIII 892
D G+ +K ++ T P D +++ AS++IPVP PLGG +II
Sbjct: 208 DTQGKVKLKLRDLKYTHAIITGDPGSAAELKDVTTLSDEVDLGASILIPVPRPLGGLLII 267
Query: 893 GQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMD 952
G+ SI Y ++ + +S+ V + +VD G+R+LL D GRLF L+L +D
Sbjct: 268 GESSIKYVDVSRNETISRPLAESTVFVAWEQVD--GQRWLLADDYGRLFFLML----VLD 321
Query: 953 GTFSVKEPKVELLGEHCKGPVV 974
+V KV+ LG + V+
Sbjct: 322 AENAVDTWKVDFLGVTSRASVL 343
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 985 GSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSK--FGED-- 1040
G+ K+ +N +E + ++ D+ F L + L P E +I S+ +G+D
Sbjct: 772 GTVKRKISN-----GVEEVSSSFVLADEMLFRPLSTYDLRPDELVECVIRSQLNYGKDEV 826
Query: 1041 ----PNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGK 1095
F +GTA + ++ +GRI+IF + + L I EK + GAC ++ +
Sbjct: 827 GNSISKDLFFVGTAFLDDVGDDHIRGRILIFEVNRSRELSLIVEKSLMGACRTLAVMDHT 886
Query: 1096 LL-ASINSTVRLFEWTNEK----ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQ 1150
LL A + +V +F+ ++ L ++ + + + V GD + V D+M+S++L+Q
Sbjct: 887 LLVAGLVKSVSVFKLARDRFGNILLEKHTAYRTSTAPIDISVVGDTVAVADVMKSMSLVQ 946
Query: 1151 YKT-----MEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDR 1205
Y E FEE++R Y W T++ +++ ++L A+ NL + Q++ ++ DR
Sbjct: 947 YTQPEEGEQEPKFEEVARHYQTLWSTAVAPIEENVYLLADAEGNLVVLQQNITGVTESDR 1006
Query: 1206 THLQEVGTVHL 1216
LQ + L
Sbjct: 1007 KRLQPTSEIRL 1017
Score = 45.4 bits (106), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSG 57
+GSLR +R+G+GIEE + + I +W L P+ +TL++SFV TRV S
Sbjct: 416 DGSLRSVRSGVGIEELGVLASMEHITDLWTLRSACPEPFLDTLLVSFVNETRVFHFSA 473
>gi|425777692|gb|EKV15851.1| UV-damaged DNA binding protein, putative [Penicillium digitatum
Pd1]
gi|425779888|gb|EKV17916.1| UV-damaged DNA binding protein, putative [Penicillium digitatum
PHI26]
Length = 1140
Score = 222 bits (566), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 159/511 (31%), Positives = 264/511 (51%), Gaps = 43/511 (8%)
Query: 79 SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSR 138
S+R+LL D GRLF L ++ + + K+E LG+ + L YL G++FVGS
Sbjct: 298 SQRWLLADDYGRLFFLSF----ILNNLGEIDDWKLESLGKTARASVLVYLGGGMLFVGSH 353
Query: 139 LGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ------GQGQLV 187
GDSQ+++L+ GT V+++ +N+API+D ++DL E Q GQ ++V
Sbjct: 354 HGDSQVLRLD------GTSFEVIQTLSNIAPILDFTIMDLGNRTNESQTHEFSSGQARIV 407
Query: 188 TCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRV 246
T SG F +G+LR +R+G+G+E+ + ++ I +W L S + +TL+++FV TRV
Sbjct: 408 TGSGAFDDGTLRSLRSGVGMEDLGVLGEMEHISDLWGLQTRSTGDYLDTLIVTFVDETRV 467
Query: 247 LTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
S EVEE + G + + T + +LQVT A++ ES + W P
Sbjct: 468 FQFSPDGEVEELDNFLGLSLTESTLLATRLQGGRILQVTEQRALVADLESGMVIFEWVPQ 527
Query: 305 NGKSISVVSCNKNQ-VLCATGCDVYYLEVHGS-EIKQLAHRALEYEVACLDISPLSNEET 362
+ K I+ VS N++ VL +G V ++ + +I +L + +++ L +
Sbjct: 528 DQKLITAVSTNEDHLVLVISGQIVASFDIRDNVQIIKLKDLGADQQISGLTVP------- 580
Query: 363 SSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT--CFEGHCYL 418
S P +A G +L + + + LG GE PRS+L+ L
Sbjct: 581 -STPTGVFIA--GFPQSAKVSILDIKDFAVLQTKSLGPPGESFPRSVLVAEVLANSQPTL 637
Query: 419 LVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYS 477
+++ DG + FSLD L++ K+ LG+ QP K + NVFA + P++IY
Sbjct: 638 FISMADGCVITFSLDSRDCSLSEMNKLILGSEQPIFKKLPKGDGLYNVFATCENPSLIYG 697
Query: 478 SNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAP 537
S ++++S VN + +C LNAE+YPDS+A+AT+ +D + I+T+P+G
Sbjct: 698 SEGRIIYSAVNSDGASRVCHLNAEAYPDSIAVATEKELKIALVDRERTTQIQTLPMGSTV 757
Query: 538 RRIAYQESSQTFGVITTRIDIQEADGSTPVR 568
RR+AY S + FG+ T ID + +G+ V+
Sbjct: 758 RRVAYSPSEKAFGIGT--IDRKLENGAEVVK 786
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 154/324 (47%), Gaps = 52/324 (16%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-KDLLFIITQRYNAMIL 749
LV AK +R+E +T+TP+G+ L ++ ++ PT+ D +F+ T +YN +
Sbjct: 29 LVAAKASRLEFYTLTPDGIVLTVTRALNARVTMLARLPAPTNSPTDHIFVGTDQYNYFTI 88
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI------- 802
+ ++++ + ++++ + S+ +IDP R + L +Y G+ +
Sbjct: 89 TWDRETNDIKT-ARTCVDIAEPSSRESQCAPRCLIDPTGRFMTLEVYEGVIVVVPIVQPT 147
Query: 803 --------------IPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGR 848
PL+ + K ++ R++EL ++ FLH +P + +++D N +
Sbjct: 148 KKRGRMSMAGSQPDFPLQVGELD-KPTTSRIDELFVRSSAFLHSESSPWLALLYED-NQQ 205
Query: 849 HVKTHEISLKEKEFT--------KTPWKQ----------DNIEMEASLVIPVPEPLGGAI 890
V+ + ++E +FT +K+ +++ +S +IP+P PLGG I
Sbjct: 206 KVR---LRIRELDFTPGSSGTLADATFKEVQKLEGGEFGQELDLGSSHLIPIPAPLGGLI 262
Query: 891 IIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEK 950
++G+ SI Y + + + +++ V + KVD+ +R+LL D GRLF L
Sbjct: 263 VLGETSIKYIDDNANDVITRHLEEATVFVAWEKVDS--QRWLLADDYGRLFFLSF----I 316
Query: 951 MDGTFSVKEPKVELLGEHCKGPVV 974
++ + + K+E LG+ + V+
Sbjct: 317 LNNLGEIDDWKLESLGKTARASVL 340
Score = 86.3 bits (212), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 16/233 (6%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF--GEDPN------ 1042
T ++ + EV + ++ D+ F L A +L P E S++ ++ G+D N
Sbjct: 773 TIDRKLENGAEVVKSHFVLADEIMFRRLDALELGPDELVESVVRAELPAGKDENGKEIVK 832
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASIN 1101
FV+GTA ++ E +GRI+I D G KL Q+AE + GAC ++ ++A++
Sbjct: 833 DRFVVGTAFADEDQEESIRGRILILEVDHGRKLSQVAELPVMGACRALAMMGDCIVAALV 892
Query: 1102 STVRLFEWTNEKELRLE--CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY---KTME- 1155
R+ + N ++LE ++ + + + V + I V DLM+SL L++Y T E
Sbjct: 893 VVYRV-KINNVGPMKLEKLAAYRTSTAPVDVTVVDNLIAVADLMKSLCLIRYTPGHTGEP 951
Query: 1156 GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHL 1208
E+ R Y W T+I + DE FL ++ NL + +++ + +D+ L
Sbjct: 952 AKLTEVGRHYQTVWSTAIACVGDETFLQSDAEGNLIVLSRNTNGVTAQDKHRL 1004
>gi|225680146|gb|EEH18430.1| DNA damage-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 1138
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/494 (30%), Positives = 249/494 (50%), Gaps = 35/494 (7%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRLF L+L +D +V+ K++LLG I L YL GV F+GS
Sbjct: 366 QRWLLADDYGRLFFLML----ILDEDNAVQSWKLDLLGNIPRASVLVYLGGGVTFIGSHQ 421
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ------GQGQLVT 188
GDSQL+++ E ++++F+N+API+D ++DL E Q GQ ++VT
Sbjct: 422 GDSQLIRITEGSFE------IIQTFSNIAPILDFTIMDLGGRAGENQTHDFSSGQARIVT 475
Query: 189 CSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 247
SG F +GSLR +R+G+G+EE + + I +WAL + + +TL++SFV TRV
Sbjct: 476 GSGAFDDGSLRSVRSGVGMEEVGVLGAMEHITDLWALRVACQEGFSDTLLVSFVDETRVF 535
Query: 248 TLS-GAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPN 305
+ EVEE E G + T N+ +LQVT + + + +W PP+
Sbjct: 536 HFTQDGEVEEKDEFMGLGLAESTLLAANLPNGRILQVTERNVRVADLDDGMLLWNWSPPS 595
Query: 306 GKSISVVSCNKNQVLCATGCDVYY-LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSS 364
K+I+ S N + ++ G V ++ G E+K + D + +S +S
Sbjct: 596 QKAITAASSNDDHLVLVVGGQVLMCFDIQG-EVKLAGKKDFG------DDTQVSGVTVTS 648
Query: 365 EPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--EGHCYLLVAL 422
PA + + ++ L ++ GE PRS+L+ L V++
Sbjct: 649 SPATYCILCLPQTAEVVVMNLEDMTIRHSTSVGEPGEAFPRSVLVAEVLPNQPATLFVSM 708
Query: 423 GDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYSSNHK 481
DG +F FS + L K+ LG+ QP+ K R N+FA ++P++IY++ +
Sbjct: 709 ADGRVFSFSFNADEFTLKKMSKLVLGSEQPSFKKLPRGDGLYNIFATCEQPSLIYATEGR 768
Query: 482 LVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIA 541
+++S V+ Q + +C N+E+YP S+ALAT + +D + I T+ + E RR+A
Sbjct: 769 IIYSAVHSDQASRICHFNSEAYPGSIALATPTELKIAHVDSERTTQIHTLEIDETVRRVA 828
Query: 542 YQESSQTFGVITTR 555
Y + + FG+ T +
Sbjct: 829 YSAAEKAFGIGTIK 842
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 119/540 (22%), Positives = 207/540 (38%), Gaps = 146/540 (27%)
Query: 689 LNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KFFRGPTD--------------- 732
++L +K+NR+E ++ TPEGL +YGK+ + K R P
Sbjct: 37 IHLPPSKSNRLEFYSQTPEGLSLQYSKAIYGKVTTLAKLSRPPIQQQQQQQQQQQQQQQQ 96
Query: 733 --------------------KKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRI 772
+ D+LFI T R + L K + +++D
Sbjct: 97 QQPQTQSQSPPQIQQPLFLPQTDVLFIGTDRATYFTVSWNPVTSQLRTERK-YVDLADPS 155
Query: 773 GKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKAS----------------- 815
+ S+ G +IDP + I L LY G+ +IP+ + + S
Sbjct: 156 SRESQLGDRCLIDPSGKFITLELYEGIITVIPIGQPQRTARQSGRKYGKRAVTAQNQHDS 215
Query: 816 ------------------SIRMEELEIQDVQFLHGCQN--PTIICIHQDVNGR-HVKTHE 854
R++EL ++ FLH + P + +++D G+ +K E
Sbjct: 216 SHIGNTNAAGEVELGEPCQARVDELLVRSSAFLHTQADMLPRMAFLYEDTMGQVRLKVRE 275
Query: 855 ISLKEKE------------------FTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQES 896
+ F ++ +EM AS +IPVP PLGG +++G+ S
Sbjct: 276 LEFTYGGMGIGTGGGAGQDTGCIAVFKALDLLKEELEMGASFLIPVPAPLGGLLVLGETS 335
Query: 897 ILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFS 956
I Y + ++ + +++ V + +VD G+R+LL D GRLF L+L +D +
Sbjct: 336 IRYLDDATNECISLPLDEATIFVAWEQVD--GQRWLLADDYGRLFFLML----ILDEDNA 389
Query: 957 VKEPKVELLGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFE 1016
V+ K++LLG + S L Y+ G T + D L+ I + +FE
Sbjct: 390 VQSWKLDLLGN-----IPRASVLVYLGGGVT--FIGSHQGD-------SQLIRITEGSFE 435
Query: 1017 ILHAHQLFPG--EYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFH--YDDG 1072
I+ ++ + + + GE+ F G Q RI+ +DDG
Sbjct: 436 IIQTFSNIAPILDFTIMDLGGRAGENQTHDFSSG------------QARIVTGSGAFDDG 483
Query: 1073 KLQQI------AEKEIKGACYSMCE-----------FNGKLLASINSTVRLFEWTNEKEL 1115
L+ + E + GA + + F+ LL S R+F +T + E+
Sbjct: 484 SLRSVRSGVGMEEVGVLGAMEHITDLWALRVACQEGFSDTLLVSFVDETRVFHFTQDGEV 543
Score = 48.9 bits (115), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEISRDYNPNWMTSIEILDDELFLGA 1184
+L G+ I V DLM+S++++++K E S E++R + W T++ + + +FL +
Sbjct: 908 YLDDVGNLIAVADLMKSVSIIEFKQGENDQPDSLTEVARHFQTLWSTAVAPIAENMFLES 967
Query: 1185 ENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLVQCR 1225
+ NL + ++ +D+D+ L EV + L+G+ + + R
Sbjct: 968 DAEGNLVVLNRNVNGVTDDDKRRL-EVTSEILLGEMVNRIR 1007
Score = 44.7 bits (104), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 53
+GSLR +R+G+G+EE + + I +WAL + + +TL++SFV TRV
Sbjct: 482 DGSLRSVRSGVGMEEVGVLGAMEHITDLWALRVACQEGFSDTLLVSFVDETRVF 535
>gi|367044684|ref|XP_003652722.1| hypothetical protein THITE_2114471 [Thielavia terrestris NRRL 8126]
gi|346999984|gb|AEO66386.1| hypothetical protein THITE_2114471 [Thielavia terrestris NRRL 8126]
Length = 1187
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 156/518 (30%), Positives = 262/518 (50%), Gaps = 49/518 (9%)
Query: 72 GSLWNGWSE----RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
S++ W+E Y L D G L +L LE E+ + V V +G+ S L Y
Sbjct: 286 ASIFVAWAEYDVKHYFLADDYGNLHLLTLETEDVV-----VTGMIVNRIGKTSRASNLVY 340
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQG----- 182
L + ++FV S GDSQL +L+ D+ V ++++ N+ PI+D ++DL +G
Sbjct: 341 LGDNLLFVASHYGDSQLFRLDLENDDARQLVQLVQTLPNIGPILDFEIMDLGNRGDEGQL 400
Query: 183 -------QGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALS-IGSPKNLD 233
Q ++VTCSG K+G+LR +R+G+G+E+ + DL +G++ LS GSPK
Sbjct: 401 ANEYSSGQARIVTCSGVHKDGTLRSVRSGVGLEDVGILADLEHCRGLFPLSSYGSPKT-- 458
Query: 234 NTLVLSFVGHTRVLTL-SGAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
+TL +SF+ TRV S +VEE E G T DQQT N+ +LQVTP+AA L+
Sbjct: 459 DTLAVSFLTETRVFKFDSHGDVEEVESFSGMTFDQQTLLAMNLPKGQLLQVTPAAASLLD 518
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCATG-CDVYYLEVHGS-EIKQLAHRALEYEV 349
ES ++SW P ++I S N +L + G ++ L + + Q + +V
Sbjct: 519 AESGVTIASWAPEGERTIISASANPRWLLLSVGGTELVSLSIANDFQTVQAKDMNQQDQV 578
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPL----GGEIIPR 405
AC+ ++P ++ + VG WT + ++ L +LE + E L IPR
Sbjct: 579 ACIHVAPGLDD----------VGVVGFWTSGTVSIIDLHTLEPIHGESLRTSKDDASIPR 628
Query: 406 SILMTCF----EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSL 460
+ + L VA+ DG++ F++ L+ +K+V LG + +
Sbjct: 629 DLALVQMLPPSASGPTLFVAMQDGNVVTFNVSKDLA-LSGRKRVILGMRQARFHLLPQPD 687
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTI 520
++FA ++ P++IY S ++V+S V + ++C + E++PD + LATD+ I
Sbjct: 688 GIFSIFATTEHPSLIYGSEGRIVYSAVTAEEATYICPFDTEAFPDCIVLATDAQIRISQI 747
Query: 521 DEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDI 558
D ++ H++ + +GE RRIAY + FG+ + D+
Sbjct: 748 DRERRTHVKPLQMGEMVRRIAYSPREKVFGLGCIKRDL 785
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 135/296 (45%), Gaps = 41/296 (13%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+LV+ + NR+EI + L V + G IA+++ R + DLLF+ T R+ L
Sbjct: 28 SLVLRRANRLEIWRLRDGLLNLVHSKVVNGTIAILQKLRPKDARTDLLFVGTDRFEYFTL 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
+ L+ + + +R + S++ ++DP R + + L+ G+ I+ L N
Sbjct: 88 AWNPETSQLDTI-NPFNDPGERHMRDSQSQDRCLVDPSGRFLAMHLWEGVLTILRL--GN 144
Query: 810 FELKAS------SIRMEELEIQDVQFLHG-CQNPTIICIHQ---DVNGRHVKTHEISLKE 859
+ A+ +R+ EL I+ FL+ +P I ++Q D + + T+ ++ +
Sbjct: 145 RKNTATVLDWMGQVRLSELFIKASTFLYTETGHPKIALLYQSRADSSDAQLATYRLTSDD 204
Query: 860 K--EFTK-TPWKQDNIEME-----ASLVIPVPE------------------PLGGAIIIG 893
+ E ++ P + I+ E AS++IPV + +GG I++G
Sbjct: 205 RNTELSRFDPNRDREIDAEIHDPSASMLIPVRKVEEQVKRHNVRNVESAKAHIGGLIVVG 264
Query: 894 QESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEE 949
+ +LY + V + ++S V +A+ D + Y L D G L +L LE E+
Sbjct: 265 ETRLLYIDEVTKTTVESALTEASIFVAWAEYDV--KHYFLADDYGNLHLLTLETED 318
Score = 60.1 bits (144), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 94/200 (47%), Gaps = 24/200 (12%)
Query: 1041 PNTYFVLGTA-VVHPE--ENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFN-GK 1095
P F++GT+ + P+ +GRI++F D D + E+KGAC + + GK
Sbjct: 837 PAERFLVGTSYLADPDLGAGTDARGRILVFGVDADRNPYLVLSHELKGACRCLAVMDDGK 896
Query: 1096 LLASINSTVRLFEW----TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY 1151
++A + TV + + + EL S+ + + L V+G+ I V DLM+S+ L+++
Sbjct: 897 IVAGLTKTVVVCRYEETSSTTAELTRLASYRPSTYPVELCVRGNTIAVADLMKSVALVEF 956
Query: 1152 ---------------KTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKD 1196
K E E +R + W T++ + D+ +L A+ NL + +++
Sbjct: 957 VPAGADETGAAGPSSKRGEAKLVEKARHFGSVWATAVSHVQDDSWLEADAQGNLMVLRQN 1016
Query: 1197 SAATSDEDRTHLQEVGTVHL 1216
+ ED+ ++ ++L
Sbjct: 1017 LEGVTAEDKKRMEVTSEMNL 1036
>gi|226291941|gb|EEH47369.1| DNA damage-binding protein 1a [Paracoccidioides brasiliensis Pb18]
Length = 1209
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/494 (30%), Positives = 249/494 (50%), Gaps = 35/494 (7%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRLF L+L +D +V+ K++LLG I L YL GV F+GS
Sbjct: 354 QRWLLADDYGRLFFLML----ILDEDNAVQSWKLDLLGNIPRASVLVYLGGGVTFIGSHQ 409
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ------GQGQLVT 188
GDSQL+++ E ++++F+N+API+D ++DL E Q GQ ++VT
Sbjct: 410 GDSQLIRITEGSFE------IIQTFSNIAPILDFTIMDLGGRAGENQTHDFSSGQARIVT 463
Query: 189 CSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 247
SG F +GSLR +R+G+G+EE + + I +WAL + + +TL++SFV TRV
Sbjct: 464 GSGAFDDGSLRSVRSGVGMEEVGVLGAMEHITDLWALRVACQEGFSDTLLVSFVDETRVF 523
Query: 248 TLS-GAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPN 305
+ EVEE E G + T N+ +LQVT + + + +W PP+
Sbjct: 524 HFTQDGEVEEKDEFMGLGLAESTLLAANLPNGRILQVTERNVRVADLDDGMLLWNWSPPS 583
Query: 306 GKSISVVSCNKNQVLCATGCDVYY-LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSS 364
K+I+ S N + ++ G V ++ G E+K + D + +S +S
Sbjct: 584 QKAITAASSNDDHLVLVVGGQVLMCFDIQG-EVKLAGKKDFG------DDTQVSGVTVTS 636
Query: 365 EPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--EGHCYLLVAL 422
PA + + ++ L ++ GE PRS+L+ L V++
Sbjct: 637 SPATYCILCLPQTAEVVVMNLEDMTIRHSTSVGEPGEAFPRSVLVAEVLPNQPATLFVSM 696
Query: 423 GDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRPTVIYSSNHK 481
DG +F FS + L K+ LG+ QP+ K R N+FA ++P++IY++ +
Sbjct: 697 ADGRVFSFSFNADEFTLKKMSKLVLGSEQPSFKKLPRGDGLYNIFATCEQPSLIYATEGR 756
Query: 482 LVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIA 541
+++S V+ Q + +C N+E+YP S+ALAT + +D + I T+ + E RR+A
Sbjct: 757 IIYSAVHSDQASRICHFNSEAYPGSIALATPTELKIAHVDSERTTQIHTLEIDETVRRVA 816
Query: 542 YQESSQTFGVITTR 555
Y + + FG+ T +
Sbjct: 817 YSAAEKAFGIGTIK 830
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 124/540 (22%), Positives = 211/540 (39%), Gaps = 152/540 (28%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KFFRGPTD----------------- 732
LVVAK+NR+E ++ TPEGL +YGK+ + K R P
Sbjct: 29 LVVAKSNRLEFYSQTPEGLSLQYSKAIYGKVTTLAKLSRPPIQQQQQQQQQQQQQQQQPQ 88
Query: 733 ----------------KKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPS 776
+ D+LFI T R + L K + +++D + S
Sbjct: 89 TQTQSPPQIQQPLFLPQTDVLFIGTDRATYFTVSWNPVTSQLRTERK-YVDLADPSSRES 147
Query: 777 ENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKAS--------------------- 815
+ G +IDP + I L LY G+ +IP+ + + S
Sbjct: 148 QLGDRCLIDPSGKFITLELYEGIITVIPIGQPQRTARQSGRKYGKRAVTAQNQHDSSHIG 207
Query: 816 --------------SIRMEELEIQDVQFLHGCQN--PTIICIHQDVNGRHVKTHEISLKE 859
R++EL ++ FLH + P + +++D G+ + ++E
Sbjct: 208 NTNAAGEVELGEPCQARVDELLVRSSAFLHTQADMLPRMAFLYEDTMGQV----RLKVRE 263
Query: 860 KEFT---------KTPWK--------------QDNIEMEASLVIPVPEPLGGAIIIGQES 896
EFT W+ ++ +EM AS +IPVP PLGG +++G+ S
Sbjct: 264 LEFTYGGMGIGTGGGAWQDTGCIAVFKALDLLKEELEMGASFLIPVPAPLGGLLVLGETS 323
Query: 897 ILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFS 956
I Y + ++ + +++ V + +VD G+R+LL D GRLF L+L +D +
Sbjct: 324 IRYLDDATNECISLPLDEATIFVAWEQVD--GQRWLLADDYGRLFFLML----ILDEDNA 377
Query: 957 VKEPKVELLGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFE 1016
V+ K++LLG + S L Y+ G T + D L+ I + +FE
Sbjct: 378 VQSWKLDLLGN-----IPRASVLVYLGGGVT--FIGSHQGD-------SQLIRITEGSFE 423
Query: 1017 ILHAHQLFPG--EYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFH--YDDG 1072
I+ ++ + + + GE+ F G Q RI+ +DDG
Sbjct: 424 IIQTFSNIAPILDFTIMDLGGRAGENQTHDFSSG------------QARIVTGSGAFDDG 471
Query: 1073 KLQQI------AEKEIKGACYSMCE-----------FNGKLLASINSTVRLFEWTNEKEL 1115
L+ + E + GA + + F+ LL S R+F +T + E+
Sbjct: 472 SLRSVRSGVGMEEVGVLGAMEHITDLWALRVACQEGFSDTLLVSFVDETRVFHFTQDGEV 531
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 127/258 (49%), Gaps = 23/258 (8%)
Query: 985 GSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT- 1043
G+ K++ N EV ++ D+ F L + L P E S+I ++F E ++
Sbjct: 827 GTIKRTLEN-----GAEVITSRFMLADEIMFRELDDYSLRPDELVESVIQAQFPEGKDSD 881
Query: 1044 -------YFVLGTAVVHPEENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGK 1095
FV+GT+ + +GRI+ F + L ++AE +KGAC ++ K
Sbjct: 882 GNESFKDIFVVGTSYLDDVGEGSIRGRILAFEVTGSRQLAKVAELPVKGACRALAVVQDK 941
Query: 1096 LLASINSTVRLFEWT----NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY 1151
++A++ TV ++ ++ L S+ + + + V G+ I V DLM+S++++++
Sbjct: 942 IVAALMKTVVIYSIAKGELSDYTLNKTASYRTSTAPIDIAVTGNLIAVADLMKSVSIIEF 1001
Query: 1152 KTMEG----SFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTH 1207
K E S E++R + W T++ + + +FL ++ NL + ++ +D+D+
Sbjct: 1002 KQGENDQPDSLTEVARHFQTLWSTAVAPIAENMFLESDAEGNLVVLNRNVNGVTDDDKRR 1061
Query: 1208 LQEVGTVHLVGDGLVQCR 1225
L EV + L+G+ + + R
Sbjct: 1062 L-EVTSEILLGEMVNRIR 1078
Score = 44.7 bits (104), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 53
+GSLR +R+G+G+EE + + I +WAL + + +TL++SFV TRV
Sbjct: 470 DGSLRSVRSGVGMEEVGVLGAMEHITDLWALRVACQEGFSDTLLVSFVDETRVF 523
>gi|115397303|ref|XP_001214243.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192434|gb|EAU34134.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1140
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 152/515 (29%), Positives = 262/515 (50%), Gaps = 45/515 (8%)
Query: 72 GSLWNGW----SERYLLGDLAGRLF--MLLLEKEEKMDGTFSVKEPKVELLGEISIPECL 125
+++ W S+R+LL D GRLF ML+L+ E ++ G +++ LG S L
Sbjct: 283 ATIFVAWEQVDSQRWLLADDYGRLFFLMLVLDSENQVQGW------QLDHLGNTSRASTL 336
Query: 126 TYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ER 180
YL GV+FVGS GDSQ++++ +G++ ++++ N+API+D ++DL E
Sbjct: 337 VYLGGGVIFVGSHQGDSQVLRVG-----DGSF-EIIQTLPNIAPILDFTIMDLGNRTSES 390
Query: 181 Q------GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLD 233
Q GQ ++VT SG F +G+LR +R+G+G+EE + ++ I +W L + +
Sbjct: 391 QTHEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGEMEHITDLWGLQFKAKGDFL 450
Query: 234 NTLVLSFVGHTRVLTLSG-AEVEE-TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
+TL+++F+ TRV S EVEE + G + + T N+ +LQVT ++
Sbjct: 451 DTLLVTFIDETRVFHFSSDGEVEELDQFLGLSLSENTLLAANLPGGRILQVTERRVLIAD 510
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVAC 351
ES+ W P + I+ S N++ V+ G ++ + + ++ + + +
Sbjct: 511 MESEMVTYEWTPSDQLIITSASANEDSVVLVAGGELMTVFDIRNNVQIVTQKNFGAD--- 567
Query: 352 LDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILM 409
S +S S P + VG +L L L E+ LG GE PRS+L+
Sbjct: 568 ---SQISGVTVPSSPTG--VCIVGFPQSAKVSVLKLQDLTELHATSLGPEGEAFPRSVLV 622
Query: 410 T--CFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVF 466
+ + +++ DGS+ +S + LT K+ LG+ QPT K R NVF
Sbjct: 623 ANVLVDSPPTIFISMADGSVITYSFNANDYSLTGMNKLILGSEQPTFKKLPRGDGLYNVF 682
Query: 467 ACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKL 526
A + P++IY S ++++S VN + +C N+E+YP+S+A+AT +D+ +
Sbjct: 683 ATCENPSLIYGSEGRIIYSAVNSEGASRVCHFNSEAYPESIAVATSHELKIALVDKERTT 742
Query: 527 HIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEA 561
I+T+P+G RR+AY S + FG+ T ++E
Sbjct: 743 QIQTLPMGATVRRVAYSPSEKAFGIGTIERKLEEG 777
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 151/301 (50%), Gaps = 46/301 (15%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK-KDLLFIITQRYNAMIL 749
LVVAK NR+E++T+TP+GL LY ++ ++ P + D LF+ T RY L
Sbjct: 29 LVVAKANRLEVYTLTPDGLSLAASCTLYARVTMLARLPAPANSPTDHLFVGTDRYTYCTL 88
Query: 750 ECRGDIDNLEILT-KAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK- 807
D +I T + + +VSD + S+ G +IDP R + L +Y GL +IP+ +
Sbjct: 89 SW--DSSQNQIRTERNYVDVSDPSSRESQTGNRCLIDPSGRFMTLEVYEGLVAVIPIVQL 146
Query: 808 ---------------DNFEL----KASSIRMEELEIQDVQFLHGCQN-PTIICIHQDVNG 847
D ++ + ++ R++EL ++ FLH P + +++D N
Sbjct: 147 PGKKRGRAPAMPSGPDAPQVGELGELTTARIDELFVRSSAFLHVQSGLPRLALLYED-NQ 205
Query: 848 RHVKTHEISLKEKEFTKTPWKQ-------------DNIEMEASLVIPVPEPLGGAIIIGQ 894
+ V+ + ++E ++T +++ AS +IPVP PLGG +I+G+
Sbjct: 206 KKVR---LKVRELQYTAATSSSGADATLADLADFAQELDLGASHLIPVPAPLGGLLILGE 262
Query: 895 ESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLF--MLLLEKEEKMD 952
SI Y + V+ + +++ V + +VD+ +R+LL D GRLF ML+L+ E ++
Sbjct: 263 TSIKYVDDDNNEIVSRLLDEATIFVAWEQVDS--QRWLLADDYGRLFFLMLVLDSENQVQ 320
Query: 953 G 953
G
Sbjct: 321 G 321
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 122/236 (51%), Gaps = 22/236 (9%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF--GEDPN------TYFVLGTAVV 1052
E+ ++ D+ F L A L E S+I ++F G+D FV+GTA +
Sbjct: 779 EIVKSQFVLADEILFRRLDAFDLRSEELVESVIRAEFPVGKDEKGRDMFKDRFVVGTAYL 838
Query: 1053 HPEENEPK-QGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+E+ +GRI++F D+G KL ++AE +KGAC ++ K++A++ TV +++ T
Sbjct: 839 DEDEDRDSIRGRILMFEVDNGRKLTKVAELAVKGACRALAMLGDKVVAALVKTVVIYKVT 898
Query: 1111 --NEKELRLE--CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG------SFEE 1160
N ++LE S+ + + + V + I V DLM+S L++Y +EG S +E
Sbjct: 899 GNNFGAMKLEKLASYRTSTAPVDITVTDNVIAVSDLMKSSCLVEY--IEGEDGLPDSLKE 956
Query: 1161 ISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
++R + W T I + +L ++ NL I +++ + ++D+ L+ G + L
Sbjct: 957 VARHFQTVWATGIACIAPHTYLESDAEGNLIILRRNLSGVEEDDKRRLEVTGEISL 1012
>gi|326426696|gb|EGD72266.1| hypothetical protein PTSG_00286 [Salpingoeca sp. ATCC 50818]
Length = 1104
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 149/493 (30%), Positives = 252/493 (51%), Gaps = 20/493 (4%)
Query: 81 RYLLGD-LAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
R+L+GD L G L +L+LE+EE V++ E GE P L YLDN VVFVGS +
Sbjct: 270 RFLIGDSLRGGLALLVLEREED-----QVQQIVYEPFGETVAPSTLAYLDNSVVFVGSVV 324
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQ+VKL + D+N + V+++ N+ ++DM + G+ +LVT SG K+GSLR
Sbjct: 325 GDSQVVKL-ETDDDNQNKIIVLDTHENIGSVLDMCSLPQASFGETRLVTASGAGKDGSLR 383
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT----LVLSFVGHTRVLTLSGAEVE 255
+I+ G+ I A + L ++ +W L+ S + T L LSF G L G E+
Sbjct: 384 VIQRGVNITSSATVQLDDLQRVWVLTKPSGEAEAATEESFLALSFAGGLAFLQFEGEELC 443
Query: 256 ETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCN 315
E+ SD C NV L VT +L+ E+ ARV+ W+ G++I +C+
Sbjct: 444 GFEVPSAPSDP-ALLCSNVAENQWLFVTEDEVVLVCAETLARVAEWKAAEGQAIGACACS 502
Query: 316 KNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVG 375
+ Q++ ++G + E+ ++ Q LE+E++CLDI P++++ TS + G
Sbjct: 503 EKQLVVSSGRQLLIFEIAKGKLTQTKDTTLEHELSCLDILPVNDDGTS-------VMVAG 555
Query: 376 LWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPA 435
W ++ A++ LPS+ P +I S +T +GDGS+ +
Sbjct: 556 TW-NVEAKVYHLPSMRVASSAPFKAGVIATSCAITRLGDQNVAFFGMGDGSVVRYIFAEG 614
Query: 436 SGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHM 495
S +T+++ V G QP L + + S V A S+ + Y+ + ++ FS +N + +
Sbjct: 615 SWHMTNQRHVHAGKQPVSLVSCKFASGPAVVALSNTSLLFYADSGRVTFSTLNEANLTCV 674
Query: 496 CSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
L+ +YPDSL +T ++ G I + LHI V LG +P + ++ ++ V+
Sbjct: 675 APLSTPAYPDSLVFSTPASLGIGQIGRMNNLHINKVALGFSPVSLTTISANPSYVVVVGH 734
Query: 556 IDIQEADGSTPVR 568
+D ++ ++ +R
Sbjct: 735 VDQEDGGIASAIR 747
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 147/298 (49%), Gaps = 21/298 (7%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKK-DLLFIITQRYNAMIL 749
LV+AK+ +++ + +GL P+ + +YGK+A ++ P K D L ++T +L
Sbjct: 31 LVLAKSTHLQVFKMGEQGLEPIHDYPVYGKVACIRKMTFPQMKGLDSLLVMTDDMRFFVL 90
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
LE T +GN+ + P E G + +DP+ RVI + +Y GL KI+ +
Sbjct: 91 TFNEHTKKLE--THTNGNLLNPSSFPMETGPLVAVDPDCRVIVMAMYPGLVKILRIHGCK 148
Query: 810 FELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEI-SLKEKEFTKTPWK 868
FE +AS R++ ++ + LHGC PT+ + Q + R VK + S E + WK
Sbjct: 149 FEEEASEARLDADQVLSMAMLHGCAEPTLAVLCQRADQRFVKLMRVTSRNELVEVSSVWK 208
Query: 869 ---QDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVD 925
+ + A + PVP G ++ G ++++Y Y A + I + A VD
Sbjct: 209 TRLEGAVPDSAHFLHPVPNTSEGCLVFGADAVVYADANGYKAAS---IPEMMVQAVADVD 265
Query: 926 ANGERYLLGD-LAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYI 982
+G R+L+GD L G L +L+LE+EE V++ E GE V S+L+Y+
Sbjct: 266 DSGARFLIGDSLRGGLALLVLEREED-----QVQQIVYEPFGE-----TVAPSTLAYL 313
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 107/198 (54%), Gaps = 12/198 (6%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFH 1068
+ D T E++ +H+L E +I KF +D YF++GTA V P E +P +GRI+I
Sbjct: 748 VFDGTTLEMVASHELPAPEAVNCVIQHKFKDDNTEYFIIGTAFVDPTETQPSRGRILISK 807
Query: 1069 YDDGK-LQQIAEKEIKGACYSMCEFNGK----LLASINSTVRLFEW-----TNEKELRLE 1118
++ K + + E E G+ Y + + GK L+A IN+ V F++ K+LR
Sbjct: 808 LENKKEIAIVHECEAAGSVYCLTKMCGKDTDDLVAGINNQVVHFKYDATGQDAAKKLRAV 867
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
+ N + L D +LVGD++ ++ ++Q + + ++ NW++S ++++
Sbjct: 868 SGNQNFGAVVSLDSCDDIVLVGDMLNAVFVMQ--KAQDKLQLVAGSQTANWVSSCALVNE 925
Query: 1179 ELFLGAENSYNLFICQKD 1196
+FL A ++++L +CQ++
Sbjct: 926 TVFLVASHAHSLSVCQRE 943
>gi|406865227|gb|EKD18269.1| CPSF A subunit region [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1146
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 156/509 (30%), Positives = 258/509 (50%), Gaps = 47/509 (9%)
Query: 72 GSLWNGW----SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
+++ W +RYLLGD G L +L + DG V + LLG IS +
Sbjct: 285 AAIFVAWVKVDDQRYLLGDDYGNLHLLSILSNH--DG--EVMGMDLMLLGTISKATTMVN 340
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL-----ERQ- 181
L +GV FVGS +SQ+++++ D Y++++++ N+API+D+ V+D+ E Q
Sbjct: 341 LGDGVFFVGSHEAESQVIRVDL--DRKDHYITIIQTMQNIAPILDLAVMDMGNREGESQS 398
Query: 182 -----GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI--DLPGIKGIWALSIGSPKNLDN 234
GQ +LVT SG F+ GSLR +R+G+G+E+ + ++ I+ ++++ + + D+
Sbjct: 399 NEYSTGQTRLVTGSGAFQSGSLRSVRSGVGLEDIGILVDEIGDIRDVYSMRSTAGTHFDD 458
Query: 235 TLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTES 294
LV+S TRV T G E E G + QT + +LQVT S+ ++
Sbjct: 459 ILVVSLPTETRVFTFLGEIEEVAEFRGLELNCQTLLASGLSNGMMLQVTESSVKILGPGP 518
Query: 295 KARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEY--EVAC 351
+ W PP G+ I+ S N + VL + +G + L++ G +K++A + LE +VAC
Sbjct: 519 SYVAAKWTPPAGEYITDASANDSYVLVSVSGTTLVSLDI-GQGLKEVAVQPLEAADQVAC 577
Query: 352 LDISPLSNEETSSEPAK-AQLAAVGLWTDISARLLSLPSLEEVCKEPL---GGEIIPRSI 407
+ + P + + VG W S +L+L +LE + E L IPR I
Sbjct: 578 VYV-----------PRNLSDIGVVGFWKSGSISILNLSNLEIILSEDLRRKNNASIPRHI 626
Query: 408 ----LMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSLST 462
L+ L VA+ DG + F++D ++ L+ +K + LGT+ R
Sbjct: 627 ILAQLLPAVAAGPTLFVAMEDGVVLTFNVDKSTFSLSGRKSLVLGTEHAKFHLLPREGGL 686
Query: 463 TNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDE 522
NV A + PT+IY+S ++V+S V C N+E YP SL +AT + ID+
Sbjct: 687 NNVLATCEHPTLIYASEGRIVYSAVTADDAKCACPFNSEEYPGSLVVATQRSLKISKIDD 746
Query: 523 IQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
++ H+RTV +G+ RRIAY + + FG+
Sbjct: 747 ERQTHVRTVHIGKTVRRIAYSGAERAFGI 775
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 103/188 (54%), Gaps = 10/188 (5%)
Query: 1039 EDPNTYFVLGTAVVHPEENEPK-QGRIIIFHYDDGKLQQ-IAEKEIKGACYSMCEFNGKL 1096
ED F++GT+ + E +P +GRI++F D K +A +K AC + +GK+
Sbjct: 832 EDLAERFIVGTSFLDEESADPNIKGRILVFGIDPKKNPYLVASLNLKCACRRVAMLDGKI 891
Query: 1097 LASINSTVRLFEWT--NEK--ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY- 1151
+A +N TV +F++ EK E + + ++ + + + + + I + D+M+S++++QY
Sbjct: 892 VAVLNKTVAMFKYVEITEKAGEFKKLATFRSSTVPIDIAITENIIAITDMMQSVSIVQYT 951
Query: 1152 ---KTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHL 1208
+ M E+++RDY W T++ + D +L +++ NL + Q++ + ED+ L
Sbjct: 952 PGKEGMPDKLEQVARDYQTCWGTAVTDIGDNSWLESDHHGNLLVLQRNIDGITLEDKQRL 1011
Query: 1209 QEVGTVHL 1216
+ G ++L
Sbjct: 1012 RITGEMNL 1019
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 36/286 (12%)
Query: 691 LVVAKNNRIEIHTVTPEG-LRPVKEIFLYGKIAVMKFFRGP-TDKKDLLFIITQRYNAMI 748
LV+ + NRIEI G L + +YG I ++ R D LF+ T R+
Sbjct: 29 LVLGRGNRIEIWQSGEHGSLTMLTSKPIYGTITMLAKIRPEIAHSADQLFVGTSRFQYFT 88
Query: 749 LECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII-PLE- 806
L + LE + +VS+R S++ + ++DP + + L L+ G+ PL
Sbjct: 89 LAYNQETQALET-RQNFVDVSERHMIDSQSRDLVLVDPAGKYVVLELFEGILSCFKPLRP 147
Query: 807 ---KDNFELKASSIRMEELEIQDVQFLHG-CQNPTIICIHQDVNGRHVKTHEISLKEKEF 862
+++ K +R+ EL ++ FL+ Q P I + +D +G V+ L +++
Sbjct: 148 RKGREDVLDKPEQVRITELRVRATTFLYTETQQPKIALLFEDGSGGEVRMATYRLVDEKG 207
Query: 863 TKT---PWKQDNIEME-----ASLVIPVPEP-----------------LGGAIIIGQESI 897
T + P K E+ AS +IP+P+ LGG +++G+
Sbjct: 208 TLSRFDPSKDRENEISDLDPGASHLIPIPKNAGQKRYIVRNSTVAKAHLGGVVVVGETKF 267
Query: 898 LYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFML 943
Y +S A + ++ V + KVD +RYLLGD G L +L
Sbjct: 268 TYLDDESKAAFDYPLNDAAIFVAWVKVD--DQRYLLGDDYGNLHLL 311
>gi|340960602|gb|EGS21783.1| hypothetical protein CTHT_0036510 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1100
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 158/511 (30%), Positives = 265/511 (51%), Gaps = 51/511 (9%)
Query: 73 SLWNGWSE----RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYL 128
S++ W+E Y L D G L +L + K +G V +V +GE S L YL
Sbjct: 227 SIFVAWAEYNVTHYFLADDYGHLHLLRI----KTNGVV-VTGMEVSRIGETSRASTLVYL 281
Query: 129 DNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQG------ 182
+ +FVGS G+SQL++L+ + ++ESF N+ PI+D ++D+ +G
Sbjct: 282 GDNYLFVGSHYGNSQLLRLDLENQNPKQRLQLIESFQNIGPILDFAIMDMGNRGDSGQPG 341
Query: 183 ------QGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWAL-SIGSPKNLDN 234
Q ++VTCSG K+G+LR +R+G+G+E+ + DL +G+++L S GS K N
Sbjct: 342 NEYSSGQARIVTCSGVHKDGTLRSVRSGVGLEDIGILADLELCRGLFSLRSHGSLKT--N 399
Query: 235 TLVLSFVGHTRVLTLS-GAEVEE-TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
LV+SF+ TRV ++EE + G T DQQT ++ +L VTP+AA L+ T
Sbjct: 400 ILVMSFLTETRVFKFDHQGDIEELSSFCGMTLDQQTLLAVDLPSGQILHVTPAAATLLDT 459
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQVLCAT-GCDVYYLEVHGSEIKQLAHRALEY--EV 349
ES ++SW P G+ I S N +L + G + L + ++++ L + L ++
Sbjct: 460 ESGVAITSWTPEEGRCIINASANAEWLLLSVDGVGLVSLSL-SNDLRILKEKNLNQSDQI 518
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPL----GGEIIPR 405
ACL + P S + + VG WT + ++ L +LE + E L IP+
Sbjct: 519 ACLHVPPQS----------SGIGVVGFWTSGTVSIIDLHTLEPIHGESLRTSKDDTSIPQ 568
Query: 406 SI----LMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLG-TQPTVLKTFRSL 460
+ L+ LL+A DG++ F++ + + K++V LG TQ +
Sbjct: 569 DLALVQLLPPEVSGPLLLIATQDGNVVSFNIS-SDYSFSGKRRVVLGVTQAKFHLLPQEN 627
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTI 520
+ +V A ++ P++IY S ++V+S V + ++C ++E++PD +ALATDS +
Sbjct: 628 NLYSVLATTEHPSLIYGSEGRIVYSAVTAEEAAYVCPFDSEAFPDCVALATDSQIKLARL 687
Query: 521 DEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
D +K ++R++PL E RRIAY + FG+
Sbjct: 688 DRERKTYVRSLPLNEMVRRIAYSPKEKVFGL 718
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 93/195 (47%), Gaps = 18/195 (9%)
Query: 1040 DPNTYFVLGTAVV-------HPEENEPK-QGRIIIFHYD-DGKLQQIAEKEIKGACYSMC 1090
+P F++GT+ + P P+ +GRI++ D D QI ++KGAC +
Sbjct: 776 NPAERFLVGTSYLPDPDYSPAPSHGNPEARGRILVLGIDSDRNPYQILSYQLKGACRCLA 835
Query: 1091 EFN-GKLLASINSTVRLFEW----TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRS 1145
+ GK++ + V + E+ + +L S+ + + + + G I V DLM+S
Sbjct: 836 VMDDGKVVVGLTKAVTVCEYKETSSTTAQLTKLASYRPSTYPVEIAIHGRTIAVADLMKS 895
Query: 1146 LTLLQYKTME----GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATS 1201
++L+ Y E E +R Y W T++ + + L+L A+ NL + +++ +
Sbjct: 896 ISLVDYIPAEEGGQAKLVERARHYQSAWSTAVGYVQNGLWLEADAQGNLQVLRQNVDGIT 955
Query: 1202 DEDRTHLQEVGTVHL 1216
++DR ++ ++L
Sbjct: 956 EDDRKRMELTAEINL 970
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 114/258 (44%), Gaps = 37/258 (14%)
Query: 723 VMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIA 782
+++ R K DLLF+ T R++ L LE + ++ + +R + S++
Sbjct: 1 MLQKLRPRDSKTDLLFVATDRFDYFTLLWNPQTFRLETV-NSYKDPGERYMRDSQSQDRC 59
Query: 783 IIDPEARVIGLRLYNGLFKIIPL--EKDNFEL--KASSIRMEELEIQDVQFLHG-CQNPT 837
++DP R + + L+ G+ + + K+N + +R+ EL I+ FL+ +P
Sbjct: 60 LVDPSGRFMIMHLWEGVLNVWRMGHRKNNAMVLEWMEQVRLSELFIKASTFLYTETGHPK 119
Query: 838 IICIHQ---DVNGRHVKTHEISLKEKEFTKT---PWKQDNIEME-----ASLVIPVPE-- 884
+ ++Q D + T+ ++ +++ + P K ++ME AS++IPV +
Sbjct: 120 VAFLYQTRADATDAKLATYRLTSDDRDTVASQFNPEKDRELDMEVRDSTASMLIPVRKVE 179
Query: 885 ----------------PLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANG 928
LGG I++G+ +LY + V + + S V +A+ N
Sbjct: 180 EEVKRHNVRHVELAKAHLGGLIVVGETRLLYIDEVTKAKVESVLKEPSIFVAWAEY--NV 237
Query: 929 ERYLLGDLAGRLFMLLLE 946
Y L D G L +L ++
Sbjct: 238 THYFLADDYGHLHLLRIK 255
>gi|258572939|ref|XP_002540651.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237900917|gb|EEP75318.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1144
Score = 216 bits (550), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 155/495 (31%), Positives = 253/495 (51%), Gaps = 36/495 (7%)
Query: 79 SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSR 138
++R+LL D GRLF L+L +D +V+ KV+LLGE S L +L GVVF+GS
Sbjct: 294 NQRWLLADDYGRLFFLML----VLDSANAVRTWKVDLLGETSRASVLVHLGGGVVFLGSH 349
Query: 139 LGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQG----------QGQLVT 188
GDS ++++ E ++++ +N+API+D V+DL +G Q ++VT
Sbjct: 350 QGDSHVIRITEGSFE------IIQTLSNIAPILDFTVMDLGHRGDTLTHEFSSGQARIVT 403
Query: 189 CSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 247
SG F +GSLR +R+G+G+E+ + + I +W LS + +TL+L+FV +RV
Sbjct: 404 GSGAFHDGSLRSVRSGVGMEDLGVLGAMEHITDLWGLSAFCAEENCDTLLLAFVNESRVF 463
Query: 248 TLS-GAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPN 305
S EVEE E G + T + N+ +LQVT A + ES+ + W P
Sbjct: 464 HFSPDGEVEEKDEFLGLLLGETTLHASNLAGCRILQVTERTARITDVESELVIWHWSPSG 523
Query: 306 GKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSE 365
+ I+ + N+ ++ G + S+I+ + + +S +S
Sbjct: 524 HQKITAAAVNEQYLVLMIGGQEAVIFDIASDIQVSGPKTFKAN------KQVSGVTLTSS 577
Query: 366 PAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMTCF--EGHCYLLVA 421
PA+A + +IS +++L L E LG G+ +PRS+L+ L V+
Sbjct: 578 PAQACIFCFPQSAEIS--IVNLTDLTIRHTETLGEPGDAVPRSVLVANMIPSKPPSLFVS 635
Query: 422 LGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSLSTTNVFACSDRPTVIYSSNH 480
+ DGS+F FSL+ L++ K+ LG++ V K R NVFA D P++IY+S
Sbjct: 636 MADGSVFSFSLNAEDYSLSNANKLVLGSEAPVFKLLPRGDGLFNVFATCDHPSLIYASED 695
Query: 481 KLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRI 540
++V+S VN + +C NAE+YP ++A+AT +D + I+T+ + RRI
Sbjct: 696 RIVYSAVNSDKATRICHFNAEAYPGAIAVATPDEIKIALVDAERTTQIQTLMINGTVRRI 755
Query: 541 AYQESSQTFGVITTR 555
AY + + FG+ T R
Sbjct: 756 AYSAAERAFGLGTVR 770
Score = 120 bits (301), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 157/317 (49%), Gaps = 42/317 (13%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KFFRGPTDKKDLLFIITQRYNAMIL 749
LV+AK+NR+E++T P+GL +YGKI+V+ K R + DLLF+ T R L
Sbjct: 29 LVIAKSNRLELYTKAPDGLALKYSKAVYGKISVLQKLPRPNPSETDLLFVGTDRDAYFTL 88
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
L K + +++D + S++G + +DP + + L +Y G+ +IP+ ++
Sbjct: 89 SWNSATGQLHTEQK-YVDMADPSLRDSQSGDRSWVDPSGKFLTLEIYEGIITVIPIAQE- 146
Query: 810 FELKASSI--------------------RMEELEIQDVQFLH--GCQNPTIICIHQDVNG 847
LK SS+ R+EEL I+ FLH + P I +++ +G
Sbjct: 147 -PLKRSSLSGPSLGPPKERAHLGEPVQARIEELAIRSTAFLHQDSSRVPRIAILYESTDG 205
Query: 848 R-HVKTHEISLKE---------KEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESI 897
R +K ++ EF DN+E+ A +++PVP PLGG +I+G++ I
Sbjct: 206 RVKLKLRDLIYTRGVVNGEASVAEFHNVDELYDNLELGAEILVPVPLPLGGILILGEKCI 265
Query: 898 LYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSV 957
Y S + + ++ V + ++D +R+LL D GRLF L+L +D +V
Sbjct: 266 KYVDTISNETITLPLEYNTVFVAWEQLD--NQRWLLADDYGRLFFLML----VLDSANAV 319
Query: 958 KEPKVELLGEHCKGPVV 974
+ KV+LLGE + V+
Sbjct: 320 RTWKVDLLGETSRASVL 336
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%), Gaps = 24/225 (10%)
Query: 1001 EVEVHNLLIIDQNTFEILHA-----HQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPE 1055
E+ L + D N+ E++ H F G+ + P F++GT+V+ P
Sbjct: 789 EIMFRQLSVFDLNSNELVECVIRTEHPAFNGQ--------QNNGRPKDIFIVGTSVLDPA 840
Query: 1056 ENEPKQ--GRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNE 1112
E Q GRI+IF + +L+ ++E ++GAC ++ NGK++A++ +V +
Sbjct: 841 EAPESQTKGRILIFDVGVNRELRMVSEFPVRGACRALAMVNGKIVAALMKSVVILSMKKG 900
Query: 1113 KELRL----ECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFEEISRD 1164
+ E S+ + + L V + I+V DLM+S++LL+Y+ E S +E++R
Sbjct: 901 NSYSIDIGKESSYRTSTAPVDLSVTDNIIVVADLMKSISLLEYQAGEAGQPDSLKEVARH 960
Query: 1165 YNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
Y W T+ + + FL ++ NL + +++ +++D+ +Q
Sbjct: 961 YQTLWTTTAAPIAENAFLVSDAEGNLVVLNRNTTGVTEDDKRRMQ 1005
>gi|367033707|ref|XP_003666136.1| hypothetical protein MYCTH_2310607 [Myceliophthora thermophila ATCC
42464]
gi|347013408|gb|AEO60891.1| hypothetical protein MYCTH_2310607 [Myceliophthora thermophila ATCC
42464]
Length = 1043
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 157/511 (30%), Positives = 257/511 (50%), Gaps = 46/511 (9%)
Query: 72 GSLWNGWSE----RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
S++ W+E Y L D G L +L L E + V V +G+ S L Y
Sbjct: 176 ASIFVAWAEYNAVNYFLADDYGNLHLLTLVTENA--DSVVVTSLDVNWIGKTSRASHLVY 233
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQG----- 182
L N ++FVGS GDSQL +L+ ++ + ++++ N+ PI+D ++D+ +G
Sbjct: 234 LGNDLLFVGSHYGDSQLFRLDLQNEDPKALLQLVQTLHNIGPILDFAIMDMGNRGDEGQL 293
Query: 183 -------QGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWAL-SIGSPKNLD 233
Q ++VTCSG K+GSLR +R+G+G+E+ + DL +G+++L S G+PK
Sbjct: 294 GNEYSSGQARIVTCSGVHKDGSLRSVRSGVGLEDVGILADLEHCRGLFSLKSYGAPKT-- 351
Query: 234 NTLVLSFVGHTRVLTLSG-AEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
+ L +SF+ TRV +VEE E G DQQT ++ +LQVTP+AA ++
Sbjct: 352 DILAVSFLTETRVFKFDAQGDVEELESFAGLAFDQQTLLATDLQGGRLLQVTPAAATVLD 411
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVAC 351
TES V+SW+P + +SI S N +L L V G+E+ L+ V
Sbjct: 412 TESGLTVASWKPGDQRSIINASANSKSLL---------LSVDGTELVSLSISDDLQVVRT 462
Query: 352 LDISPLSNEETSSEPAKA-QLAAVGLWTDISARLLSLPSLEEVCKEPL----GGEIIPRS 406
DIS PA+ + VG W+ + ++ L +LE + E L IPR
Sbjct: 463 RDISKQDQIACIHVPAQPDNVGVVGFWSSGTVSIIDLHTLEPIHGESLRTSQDDASIPRD 522
Query: 407 -----ILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSL 460
IL G L VA+ DG++ F++ L+ +K+V LG + L +
Sbjct: 523 LALVQILPPGVSGPT-LFVAMQDGNVVTFNITKDLA-LSGRKRVILGMRQARLHLLPQPD 580
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTI 520
++FA ++ P++IY S ++V+S V + ++C +A+++P+ +ALATD I
Sbjct: 581 GIYSIFATTEHPSLIYGSEGRIVYSAVTAEEATYICPFDAQAFPECIALATDKQLKICHI 640
Query: 521 DEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
D ++ H++ + + E RRIAY + FG+
Sbjct: 641 DRERRTHVKPLAMNEMVRRIAYSPKEKVFGL 671
Score = 60.1 bits (144), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 1040 DPNTYFVLGTAVVHPEENEPK---QGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEF-NG 1094
+P F++GT+ + + P +GR++ F D D I E+KGAC + +G
Sbjct: 729 NPAERFIVGTSFLPDPDYGPGTDVRGRMLFFGVDADRNPYLILSHELKGACRCVAVMEDG 788
Query: 1095 KLLASINSTVRLFEW----TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQ 1150
++A + TV + + + EL S+ + + V+G+ I V DLM+S++L++
Sbjct: 789 TIVAGLTKTVVVCRYEETSSTTGELTRLASYRPSSYPAEICVRGNTIAVADLMKSVSLVE 848
Query: 1151 YKTMEGS--FEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHL 1208
Y +G+ E +R + W T++ + + +L A+ NL + +++ + EDR +
Sbjct: 849 YVPGDGTPRLVERARHFGSVWATAVGFVREGSWLEADAQGNLMVLRRNVEGVTAEDRRRM 908
Query: 1209 Q 1209
+
Sbjct: 909 E 909
Score = 47.0 bits (110), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 35/199 (17%)
Query: 783 IIDPEARVIGLRLYNGLFKIIPL--EKDNFELK-ASSIRMEELEIQDVQFLHG-CQNPTI 838
++DP R + + L+ G+ ++ L K+ L +R+ EL I+ FL+ +P I
Sbjct: 11 LVDPTGRFLAMHLWEGVLTMMRLGDRKNKMVLTWMDQVRLSELFIRASTFLYTETGHPKI 70
Query: 839 ICIHQ---DVNGRHVKTHEISLKEK--EFTK-TPWKQDNIEME-----ASLVIPVPE--- 884
++Q D + T+ ++ ++ E +K P + I+M+ AS++IPV +
Sbjct: 71 AFLYQSRADSGDAKLATYRMTADDRNTEASKFNPERDREIDMDVPDSSASMLIPVRKVEE 130
Query: 885 ---------------PLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGE 929
+GG +++G+ +LY + V V + ++S V +A+ N
Sbjct: 131 GVKRHNVRNVESAKAHIGGLVVVGETRLLYIDEVTKVTVQSALKEASIFVAWAEY--NAV 188
Query: 930 RYLLGDLAGRLFMLLLEKE 948
Y L D G L +L L E
Sbjct: 189 NYFLADDYGNLHLLTLVTE 207
>gi|393212467|gb|EJC97967.1| hypothetical protein FOMMEDRAFT_162310 [Fomitiporia mediterranea
MF3/22]
Length = 1161
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/524 (29%), Positives = 250/524 (47%), Gaps = 48/524 (9%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLLGD GRL +L + + + LLGE+S P LT L + ++VGS G
Sbjct: 303 RYLLGDSFGRLALLAINPQYAY--------LDIVLLGEVSPPTSLTPLASQYIYVGSHFG 354
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DSQL+++ NG+Y+ + ++F N+API+D V D + GQ ++TCSGG GSLR+
Sbjct: 355 DSQLIRVTSERSSNGSYLEISDTFKNIAPIMDAVFEDTDDSGQPTIITCSGGESTGSLRV 414
Query: 201 IRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVE---- 255
IRNG E A I+ + I G+W + + ++++ +T +L L ++ E
Sbjct: 415 IRNGANFNEDARIEGIANITGMWPIRRQYDDTFHHYMLVTTDTNTHLLELPNSQQETAVS 474
Query: 256 -ETEMGGFTSDQQTFYCGNVDPRTVLQVTPS--------------AAILISTESKARVSS 300
+ T D +T GN+ R + + S + IL++T + R
Sbjct: 475 RSNDFSDLTIDSRTLVAGNMLTRLMSESGKSEYVSSSYVVQVSRDSVILLNTRTGLREDQ 534
Query: 301 WEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRAL------EYEVACLD 353
W P G I + + +Q+ A +G V L + +I + + + E++ L
Sbjct: 535 WSPGPGNKIVLADISPSQICVAISGGTVVLLNLFADKINEQSRKQFYSPDGSSSEISALS 594
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF- 412
ISP+ S A+G W+ ++L LP+ E++ P+ +PRS+L+ F
Sbjct: 595 ISPMKRGANFS-----SFVALGFWSSHEVKVLRLPTFEQIDAVPVVMPHLPRSLLLCDFS 649
Query: 413 ----EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFAC 468
+ H YL+V L +G++ G L +KK LG P L VFA
Sbjct: 650 EEESKPHRYLMVGLANGTVVSMPF-AEKGVLGEKKFFGLGGAPVSLSRCEVNDKPAVFAS 708
Query: 469 SDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHI 528
R + Y S L S V ++ V ++++ES+ S+AL+T G + E+ KLHI
Sbjct: 709 GARSALFYRSKDTLSHSPVLIKDVTFASAIHSESFTSSMALSTLDGLVVGRVLELDKLHI 768
Query: 529 RTVPLG-EAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSA 571
RTV +G E P ++AY +++ GV ++D G+ PV S+
Sbjct: 769 RTVFMGKENPTKLAYHSAAKLLGVGCLKLDRSTFKGA-PVAASS 811
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 134/306 (43%), Gaps = 20/306 (6%)
Query: 893 GQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMD 952
G S L++ K ++ +P +IK T ++ L L G + +LE ++
Sbjct: 709 GARSALFYRSKDTLSHSPVLIKDVTFASAIHSESFTSSMALSTLDGLVVGRVLELDKLHI 768
Query: 953 GTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQ 1012
T + + L H ++ + L + ST + + F + +D
Sbjct: 769 RTVFMGKENPTKLAYHSAAKLLGVGCLKLDR--STFKGAPVAASSFKL---------VDT 817
Query: 1013 NTFEILHAHQLFPGE--YALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYD 1070
F H L P E A++L+S G +T+F +G+ E EP +GRI+I
Sbjct: 818 VDFRTTHEISLEPNEEITAVALVSLDCGIGWDTFFAVGSVYFDETEREPSRGRILIISTG 877
Query: 1071 DGKLQQ---IAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLEC--SHFNNI 1125
+ Q +A E+KGA ++ GKL+ +IN++V +F + L S +N
Sbjct: 878 SKRNQTPHILASTEVKGAVNALTCIQGKLVVAINTSVDVFRLKHGDNTVLTAVTSWNHNY 937
Query: 1126 IALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAE 1185
+ + V D I++GD + SL +L+ + + +RDY+P W I D++ +GA
Sbjct: 938 LVITAVVMDDLIVIGDAVSSLAVLKLE--DDKLTTFARDYSPLWPLCIGAFDNKTVIGAN 995
Query: 1186 NSYNLF 1191
N NLF
Sbjct: 996 NDNNLF 1001
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 139/299 (46%), Gaps = 48/299 (16%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDL---LFIITQRYNAM 747
LVVAK++ +E+ + P+ LR + ++G+I ++ PTD ++ L ++T +
Sbjct: 30 LVVAKSSILEVFAILPDALRLQCVLEIWGRITSLQAV--PTDDENSQHHLLVLTDHPDPK 87
Query: 748 IL------ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFK 801
+ G +L+ L ++ +R +P+E ++D + +V Y G +
Sbjct: 88 LFLLEYVQSNAGSGPSLKTLKTV--SLHERNARPTEYVSKCLVDHKGKVAVACSYTGKLR 145
Query: 802 IIPLEKD--NFELKASSIRMEELEIQDVQFLH--GCQNPTIICIHQDVNGR-HVKTHEIS 856
++ LEK N E + + EL I + FL + + +++D + V +H++S
Sbjct: 146 VLELEKGLINSEFDTA---VRELNIVSLCFLRTTNARATALAILYKDYMQKLSVTSHDLS 202
Query: 857 LKEKEFTKTP---WKQDNIEMEAS-LVIPVPEPL-------GGAIIIGQESILYHS---- 901
L + E + +P + ++ E S L+IPVP + GG +++G +I ++S
Sbjct: 203 LADLELSPSPSSFLPEFHVPDEDSNLLIPVPPQIKSSWNVNGGVLVLGGSTIAFYSIDRK 262
Query: 902 ---------GKSYVAVAPQI---IKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKE 948
KS + PQ I +A++D +G RYLLGD GRL +L + +
Sbjct: 263 QKKKNSSSQSKSSTSKIPQAEVNWPYFDITAWAQIDEDGLRYLLGDSFGRLALLAINPQ 321
>gi|402083318|gb|EJT78336.1| hypothetical protein GGTG_03437 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1155
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 150/509 (29%), Positives = 260/509 (51%), Gaps = 43/509 (8%)
Query: 79 SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSR 138
+ Y+L D G L +L L+ +E DG +VK+ V L+G+ S L LD+G +FVGS
Sbjct: 294 ASHYILADDYGGLHLLTLDVKE--DGV-TVKDIIVCLIGKASRANELVCLDSGYLFVGSH 350
Query: 139 LGDSQLVKLNR-SPDENGTYVSVMESFTNLAPIIDMVVVDLERQ------------GQGQ 185
GDS+L+ LN D + V +++ ++API+D V+D+ + GQ +
Sbjct: 351 YGDSELLCLNLVREDTDRPLVETVQTLPSIAPILDFTVMDMGNREADNTVGNEYASGQAR 410
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHT 244
+VT SG ++GSLR +R+G+ +++ + D+PG++G++ L N LV SF+ T
Sbjct: 411 IVTGSGAHRDGSLRSVRSGVRLDDIGILADMPGVRGLFPLESNGETN---ALVASFLTET 467
Query: 245 RVLTLSG-AEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWE 302
RV T ++EE E G ++ N+ ++LQ+T A +I E+ +SSWE
Sbjct: 468 RVFTFDAEGDIEEVEAFQGLDLSVRSLLVTNLGDDSILQITDHGASVIGPEAGITISSWE 527
Query: 303 PPNGKSISVVSCN-KNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEE 361
PP G+ I+ S N K +L G + L + + + +++CL
Sbjct: 528 PPTGRVITGCSTNGKWLLLSIDGKTLVSLRIPDLTVSTQRESSPNDQISCL--------- 578
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPL----GGEIIPRSILMT----CFE 413
++ P + AVG W+D S +++L +L+ + E L I+PR I++
Sbjct: 579 -AASPHLPDIGAVGFWSDGSVSIINLCTLDVIHSETLRRTKDAAIVPRDIVLARVLPAEV 637
Query: 414 GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSLSTTNVFACSDRP 472
L V++ DG + F+L+ G+L+ +K V LGT+ + N+F S+
Sbjct: 638 AGPTLFVSMDDGEVVTFTLNDV-GKLSARKSVVLGTRQARFHVLPQPGDVCNIFVTSEHS 696
Query: 473 TVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVP 532
++IY S+ ++++S V ++C + +P SLA+ATDS ID ++ H++++P
Sbjct: 697 SLIYGSDKRIIYSAVTAESATYVCPFDTAVFPGSLAVATDSELKISKIDPQRQSHVQSLP 756
Query: 533 LGEAPRRIAYQESSQTFGVITTRIDIQEA 561
+GE R IAY ++ FG+ R +I +
Sbjct: 757 MGENVRSIAYSAPTRVFGLGCIRREISKG 785
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 94/195 (48%), Gaps = 24/195 (12%)
Query: 1045 FVLGTAVVHPEENEP---KQGRIIIFHYDDGKLQ-QIAEKEIKGACYSMCEFNGKLLASI 1100
F++GT + E P +GR+++F D+ + QI +K C + ++ ++
Sbjct: 835 FIVGTRFLVDENLVPGSNSKGRVLVFGVDEERSPFQIVSHPLKSGCRRLAVMEEMIVVAL 894
Query: 1101 NSTVRLFEW-----TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY---K 1152
TV + + T+ K +++ S+ A+ + V+G I VGD+M+S++L+++
Sbjct: 895 TKTVVVARYEELTSTSGKLIKV-ASYQTTSYAIDVAVEGRLIAVGDIMKSMSLVEFVPPT 953
Query: 1153 TMEGSFE-----------EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATS 1201
T+ G + E+ R Y +W T++ + E +L A+ N+ + +++ +
Sbjct: 954 TVAGDGKAGETKKPAQLIEVCRHYQSSWSTAVAHFEGESWLEADADGNVMVLGRNTTGVT 1013
Query: 1202 DEDRTHLQEVGTVHL 1216
EDR ++ ++L
Sbjct: 1014 LEDRRRMEITSEINL 1028
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 140/314 (44%), Gaps = 41/314 (13%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILE 750
LV+AK+NR+E+ V L ++G I +++ + +++ + T R+ +
Sbjct: 29 LVLAKSNRLEVWQVAGGHLTLTHSKTIHGTIVMLQALQPKDSPTEMILVGTDRFRYFSVL 88
Query: 751 CRGDIDNLEILTK--AHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
+ LE + HG ++ + ++DP R I + +++G+ ++ L++
Sbjct: 89 WNQETRELETVQDFLDHG---EQFVRDVTTRHRCLVDPSGRFIVMLVWSGVINVMCLQRR 145
Query: 809 NFE----LKASSIRMEELEIQDVQFLHG-CQNPTIICIHQ---DVNGRHVKTHEISLKEK 860
+ L R+ EL I+D FL+ +P + ++Q +V + + + +K
Sbjct: 146 KGKQRDLLLLDQSRISELYIKDAAFLYSEDAHPRVAFLYQTKPNVPESKLVAYRLCSDDK 205
Query: 861 EFTKT---PWKQDNIEME-----ASLVIPVPE---------------PLGGAIIIGQESI 897
+ + P K I+++ A ++IPV LGG +++G+ +
Sbjct: 206 DLEVSRFDPLKDRIIDIDIPDPGAVMLIPVERVESKRHHFRNPGADARLGGLLVVGETQV 265
Query: 898 LYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSV 957
LY + V ++ V +AK DA+ Y+L D G L +L L+ +E DG +V
Sbjct: 266 LYIDDMTQATVETALMSPMVFVAWAKCDAS--HYILADDYGGLHLLTLDVKE--DGV-TV 320
Query: 958 KEPKVELLGEHCKG 971
K+ V L+G+ +
Sbjct: 321 KDIIVCLIGKASRA 334
>gi|452979181|gb|EME78944.1| hypothetical protein MYCFIDRAFT_43692 [Pseudocercospora fijiensis
CIRAD86]
Length = 1149
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 158/547 (28%), Positives = 269/547 (49%), Gaps = 59/547 (10%)
Query: 41 TLVLSFVGHTRVLTLSGAEWGFHLLRGFSSL--GSLWNGW----SERYLLGDLAGRLFML 94
T L VG TR+ + EW H ++ L +++ W +RY+L D +L++L
Sbjct: 255 TYGLLVVGETRITYVD--EWE-HKVQDSQPLEDATVFVAWCKLDEQRYILADDYKKLYLL 311
Query: 95 LLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN 154
++ D + ++++LGE S L YLD G VFVGS GDSQ++++ SP
Sbjct: 312 MVNTSPHGD----YQSLEIDVLGETSRASTLVYLDEGRVFVGSHQGDSQVIQI--SPKR- 364
Query: 155 GTYVSVMESFTNLAPIIDMVVVDLERQ-----------GQGQLVTCSGGFKEGSLRIIRN 203
+ V++SF N+API+D V+D+ + GQ ++VT SG F +GSLR +R+
Sbjct: 365 ---IDVLQSFPNIAPILDFTVMDMGNRSLDAPVNEFSSGQARIVTGSGAFNDGSLRSVRS 421
Query: 204 GIGIEEHACIDLPG--IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETE-M 259
G+G+E+ + G I I++L + +TL++S V HT V+ + ++E +
Sbjct: 422 GVGLEDRGSLGDLGAPISSIFSLRTSAAAQYVDTLIVSHVSHTNVVVFTEDGDIEARDSF 481
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF T + G++ +QVT S+ +L +E W+ P+G SI+ V+ + ++
Sbjct: 482 RGFELKDATLFAGDLRDGRAVQVTSSSVLLTDSEGDMVTDRWQAPSGTSITAVAADGEKI 541
Query: 320 LCA-TGCDVYYLEVHGSEIKQLAHRAL--EYEVACLDISPLSNEETSSEPAKAQLAAVGL 376
L + G + L++ S I+ A R E +V+C+ +SP S P G
Sbjct: 542 LVSLQGAVLVVLDLSASNIQVQAERKFGSEEQVSCIALSP-------SIP---NACVAGF 591
Query: 377 WTDISARLLSLPSLEEVCKEPLGGE---IIPRSILMTCF--EGHCYLLVALGDGSMFYFS 431
W D LSL L+ E + E +PRS+++ + L V L DG++ +S
Sbjct: 592 WKDSKVSFLSLQDLQPTASERVAEEESLAVPRSLIVANILKDQPATLFVGLADGNVVTYS 651
Query: 432 LDPASGRLTDKKKVTLGTQPTVLKTF-RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLR 490
+ A + +K + LGTQ R+ NVFA + P++IY S+ +LV+S V
Sbjct: 652 VTSAQQPFSARKCIILGTQQANFAALPRADGLQNVFATCEHPSLIYGSDGRLVYSAVTAE 711
Query: 491 QVNHMCSLNA-ESYPDSLALAT-----DSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQE 544
+ S ++ Y ++A+AT ++ +DE + H++ + + E RRIAY
Sbjct: 712 NATCIASFDSFGDYAGAIAIATTDENGENELKLAVVDEERTTHVQDLFIHETVRRIAYSA 771
Query: 545 SSQTFGV 551
+ FG+
Sbjct: 772 ELKAFGL 778
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 157/329 (47%), Gaps = 45/329 (13%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKE--IFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
+LVVAK NR+EI +P V + +YGK+ ++ R T + D LF+ T RYN
Sbjct: 28 DLVVAKANRLEIWRASPGDTTLVLQHSKAIYGKVTLLHKLRPATSQTDHLFVGTDRYNYF 87
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPL-E 806
L G+ +L+ K+ +++D+ + S+ G IDP +R + L +Y G+ ++P+
Sbjct: 88 TLSWDGERQDLKT-EKSMVDIADKAARDSQTGDRVHIDPTSRFMTLEVYEGVVNVLPIAH 146
Query: 807 KDNFELKAS-----------SIRMEELEIQDVQFLH-------GCQNPTIICIHQDV-NG 847
+ KA+ +R+ EL ++ FL+ G +P +++D N
Sbjct: 147 AGKGKRKAADNEIGELGDPIQVRIPELFVRSSCFLYRRDTGPRGKTDPMFAVLYEDSKNQ 206
Query: 848 RHVKTHEI----SLKEKEFTKTPWKQDNI------EMEASLVIPVPEPLGGAIIIGQESI 897
+K E+ SL+ E T + + EM +S +IP+P P G +++G+ I
Sbjct: 207 VRIKIRELEYSPSLRPNEEPATAELEKGVDVTGSLEMGSSFMIPLPAPTYGLLVVGETRI 266
Query: 898 LYHSGKSYVAVAPQIIKSSTI-VCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFS 956
Y + Q ++ +T+ V + K+D +RY+L D +L++L++ D
Sbjct: 267 TYVDEWEHKVQDSQPLEDATVFVAWCKLDE--QRYILADDYKKLYLLMVNTSPHGD---- 320
Query: 957 VKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
+ ++++LGE + S+L Y+ G
Sbjct: 321 YQSLEIDVLGETSRA-----STLVYLDEG 344
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 999 NMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF----GEDPNTYFVLGTAVVHP 1054
N EV H ++D+ F+ L L E +I GE+ FV+GTA +
Sbjct: 789 NEEVASH-FKLVDEVAFKELDTWALNEDELVECVIRCYLDDGSGEEAER-FVVGTAYLDD 846
Query: 1055 EENEPKQGRIIIFHY-DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK 1113
++ +GRI++ +D +++ + E ++GAC + G+++A++ T+ ++++ +
Sbjct: 847 QDANNAKGRILVLEITEDRRIKLVTELAVRGACRCLAVCQGRIVAALVKTIVVYDFEYQT 906
Query: 1114 ----ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT----MEGSFEEISRDY 1165
L + S+ + + V + I V DLM+SL+LL++K + EI+R +
Sbjct: 907 PSTPALTKKASYRTATAPIDICVTNNTIAVTDLMKSLSLLEFKAGRQGQPDTLIEIARHF 966
Query: 1166 NPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLVQCR 1225
W T+ + + +L ++ NL + Q D S EDR L+ V + L+G+ + + R
Sbjct: 967 ETLWGTACARVSENTYLESDAEGNLIVLQHDINGFSQEDRRRLR-VTSEFLLGEMVNRIR 1025
>gi|297815870|ref|XP_002875818.1| hypothetical protein ARALYDRAFT_323319 [Arabidopsis lyrata subsp.
lyrata]
gi|297321656|gb|EFH52077.1| hypothetical protein ARALYDRAFT_323319 [Arabidopsis lyrata subsp.
lyrata]
Length = 987
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 161/493 (32%), Positives = 249/493 (50%), Gaps = 33/493 (6%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RY+LG G + +L E K++ + + LG+IS+P +TYL + +VFVGSR
Sbjct: 217 RYILGGHDGHISVL----EIKINTAERLSGLTFKPLGKISVPSSITYLRDDIVFVGSRYA 272
Query: 141 DSQLVKLNR----SPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEG 196
DSQLVK+++ S + N + V+ ++TN P+ID + + + G +LV C G ++
Sbjct: 273 DSQLVKMHQLHGPSLNTNTPALQVLTTYTNSGPVIDFSLCN-KPIGVRKLVMCCGTHEDS 331
Query: 197 SLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS----GA 252
SL + G+GI ++P I+ IW+L S + LVL + L + GA
Sbjct: 332 SLEGVSTGVGISVKFFAEIPNIQRIWSLKSSSLNDNHPFLVLQPIAVAPALVFTIDDTGA 391
Query: 253 EVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVV 312
+ T M GF D T C + R +QVT + LI +++ S W + I
Sbjct: 392 FMSHT-MVGFAYDSVTICCHDAADRLFIQVTEKSVRLIDSKTGVLRSEWLASS--KILFA 448
Query: 313 SCNKNQVLCAT-GCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQL 371
S QVL AT + YL++ + Q A Y+V+CLDI P+ + T S +L
Sbjct: 449 SATIKQVLLATLDKQLVYLDIRNGILVQ-AKVQKGYDVSCLDIGPVGSNTTYS-----KL 502
Query: 372 AAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFS 431
AAVGLW + S +L LP LE + E + + PR IL+ FE YLL AL DGS+ F
Sbjct: 503 AAVGLW-EKSILVLKLPELEVLTVEHVHAHV-PRCILLCAFEQVSYLLCALADGSLLTFK 560
Query: 432 LDPASGRLTDKKKVTLGTQPTVLKTFRSL-STTNVFACSDRPTVIYSSNHKLVFSNVNLR 490
L+ G+L +K L P L+TF S S F+ S PT+I++ KL ++ +NL
Sbjct: 561 LNEDDGQLQEKNTKELEGYPKTLRTFISNGSVRACFSTSKVPTLIFTMKQKLQYNRLNLT 620
Query: 491 QVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFG 550
+ MC + LA+ T T+ +++ +I+ +P+ RR+ +QE SQT+
Sbjct: 621 DIEDMCPFQRADISEGLAIVTKDGVVICTMGDMET-NIK-IPMFSYGRRLCHQEESQTYA 678
Query: 551 VITTRIDIQEADG 563
V+ ++E DG
Sbjct: 679 VL-----VEEKDG 686
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 1005 HNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAV-VHPEENEPKQGR 1063
H+L ++D+ L + +L E+ LS++S F D Y+ +GT+V V EEN QGR
Sbjct: 688 HSLQLLDKE-LNTLFSFELNEHEHGLSIVSCSFAGDDQAYYCVGTSVNVLDEEN--TQGR 744
Query: 1064 IIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASIN-STVRLFEWTNEKELR 1116
I++F DG+L I + GA Y + NG LL +++ T+ FEW + R
Sbjct: 745 ILVFLVRDGELNIIFQYPTNGAVYYLKPLNGGLLVTVSVHTIHYFEWMLHDDAR 798
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
+FT + NLV+ K + + I+ +T GL ++E +YG++ M+ +KD+LFI T
Sbjct: 21 HFTGPKEQNLVICKVSLVSIYLMTENGLEHLREFPMYGRVVFMELSHLNNLRKDVLFIAT 80
Query: 685 QRTDL 689
+ L
Sbjct: 81 ETEKL 85
>gi|449019082|dbj|BAM82484.1| UV-damaged DNA binding protein [Cyanidioschyzon merolae strain 10D]
Length = 1372
Score = 209 bits (533), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 250/536 (46%), Gaps = 94/536 (17%)
Query: 77 GWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVG 136
G+ YLLGD G L++L + E M ++E + E S+ + YL + +VFVG
Sbjct: 416 GYHAHYLLGDRDGFLYVLSVGAEVGM---------RLECVCESSVASAIAYLGSDLVFVG 466
Query: 137 SRLGDSQLVKLNRSPDENGTYVS------------------------------VMESFTN 166
S LGDSQLV+L S E+ V V++ +TN
Sbjct: 467 SALGDSQLVRLLPSQTESPELVQTTLFATASASSHERRESRAERAECQLWFGQVVQCYTN 526
Query: 167 LAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-S 225
+ PI D++V + G ++TCSG + GSLRIIRNGIG EHA ++L GIK ++ L S
Sbjct: 527 IGPIQDLLVTGDDSFSDGHIITCSGVSRMGSLRIIRNGIGFVEHAAVELDGIKALFTLPS 586
Query: 226 IGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDP-RTVLQVTP 284
+ SP+ D LV+SF TRVL L+ A E E+ D+ T + + L VT
Sbjct: 587 LTSPE-WDEFLVVSFTAETRVLRLA-AHDELVEVESLAVDEATILAMRLPAEQLALWVTA 644
Query: 285 SAAILISTESKARVS-SWEPPNGKSISVV---SCNKNQVLCATGCDVYYLEVHGSEIKQL 340
S L+ R + +W PP+ + I+ +K ++ + +Y L+ + + +
Sbjct: 645 SYVGLVDLTLLERPAVAWTPPSSEQITNAVFDELHKLVLVSTSNAQLYVLQQRKTSLVPV 704
Query: 341 AHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP-------SLEEV 393
+ L EVAC+ A + A+G W + RL L LE +
Sbjct: 705 GSQTLPAEVACIH-------------AAYGIVALGTWAESRIRLFRLHEDTGNRWELECI 751
Query: 394 CKEPLGGEIIPRSILMTCFE------------GHCYLLVALGDGSMFYFSL-DPASGR-- 438
+ L +PRS+L+T + H LLVA+GDG +F F++ P + R
Sbjct: 752 RESALPSTSVPRSVLLTYLDDHGGLMADHGGRAHLCLLVAVGDGRLFAFNVSQPDAKRSG 811
Query: 439 ------------LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSN 486
L +++ LG++P L + VFA R +VI++ + L N
Sbjct: 812 PEPEDLSKCELQLQHPRQLRLGSRPAALNNLQLHGMRYVFAACGRASVIHAHHGTLFCGN 871
Query: 487 VNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAY 542
VNLR V + + +PDS+A+AT+ G I+ IQ+LHIR L E PRRIA+
Sbjct: 872 VNLRDVTRAVRFHTKGFPDSIAVATEQGLALGGIEHIQQLHIRRHDLREQPRRIAH 927
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 123/244 (50%), Gaps = 34/244 (13%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
E H++ +++ T E + +H L E+ LSL++ FV+GTA V P E EP +G
Sbjct: 944 ERHHVRLLNDETLETITSHDLAMNEHGLSLVAIP----ERDVFVVGTAYVLPSEMEPSRG 999
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSM----------CEFNGK----LLASINSTVRLFE 1108
RI++F +L + E GA Y+M C F L A +N+ V L++
Sbjct: 1000 RILVF--SREELLLLNELYTPGAVYTMSALADPSDRTCRFPASAARFLAAGVNNVVILYD 1057
Query: 1109 WT-----NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS------ 1157
W ++ ELR H +++ L L+ +GD +LVGDLM+SL +LQ EG
Sbjct: 1058 WGQSGHGDDYELREVARHLGHVLVLRLEARGDQLLVGDLMKSLCVLQLVLPEGETSDGAS 1117
Query: 1158 --FEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVH 1215
+ ++ DY W+T+ L+++ +L A+NSYNL Q++ T E R L G H
Sbjct: 1118 PCLKAVAWDYETAWITACAFLNEDTYLAADNSYNLLSLQRNPHETRSEFRHALNRAGAFH 1177
Query: 1216 LVGD 1219
L GD
Sbjct: 1178 L-GD 1180
Score = 93.2 bits (230), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 127/263 (48%), Gaps = 55/263 (20%)
Query: 735 DLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLR 794
D +FI+T+R + +++ + + L G+++ ++G+ G +DP AR + +
Sbjct: 188 DAVFILTERLDFAVIKYDTRLQGVATLVA--GSLASKLGRRCPLGEFVALDPSARCLAVY 245
Query: 795 LYNGLFKIIP--LEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQD-VNGRHVK 851
Y+GL K++P L + FE +R++ +++Q ++FL G ++PT+ IH D ++ RH+
Sbjct: 246 AYDGLLKVVPGSLMGEAFE-----VRLDVVQVQSMEFLIGTEHPTLAIIHTDYLHNRHLV 300
Query: 852 THEISLKEKEFTKTPWKQDNIEMEASLVIPVPE---------PLGGAIIIGQESILYHSG 902
++EI L ++ + P Q ++ A L+IPVP GG ++ S+ H G
Sbjct: 301 SYEILLGRQDVREGPIAQQYLDASAELIIPVPPAPNDSANDGACGGFVVACDTSLALHPG 360
Query: 903 KSYVAVAPQII-----KSSTIVCY------------AKVDANGE---------------- 929
+S VA Q+I + + + C+ A V+AN +
Sbjct: 361 RS--GVAKQVIHFHGGQFAPMRCFCPISGIGGSSKSASVEANRQDHFETGLEMLAAAGYH 418
Query: 930 -RYLLGDLAGRLFMLLLEKEEKM 951
YLLGD G L++L + E M
Sbjct: 419 AHYLLGDRDGFLYVLSVGAEVGM 441
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 2 GSLRIIRNGIGIEEHACIDLPGIKGIWAL-SIGSPKNLDNTLVLSFVGHTRVLTLSG 57
GSLRIIRNGIG EHA ++L GIK ++ L S+ SP+ D LV+SF TRVL L+
Sbjct: 556 GSLRIIRNGIGFVEHAAVELDGIKALFTLPSLTSPE-WDEFLVVSFTAETRVLRLAA 611
>gi|223994993|ref|XP_002287180.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976296|gb|EED94623.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1517
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 185/636 (29%), Positives = 285/636 (44%), Gaps = 165/636 (25%)
Query: 81 RYLLGDLAGRLFML--LLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSR 138
+Y+LGD GR+ +L LL + G V +E LG S + YL G +FVGS+
Sbjct: 418 KYILGDSTGRIHLLTILLNVTPEGKGDGCVTTLLMETLGTASSASAVVYLGKGCLFVGSQ 477
Query: 139 LGDSQLVKL----------------NRSPDENGTYVSVMESFTNLAPIIDMVV---VDLE 179
GDSQL+K+ ++P E TY+ +++ +TNL PI+D + D
Sbjct: 478 FGDSQLLKILDAPVPLSGGRDDEGEEKNPLEETTYLRLLDEYTNLGPIVDFDLRPCSDAT 537
Query: 180 RQGQGQ---------------LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL 224
G G +VTCSG K+G++R++RNG+G+ EHA +++PGIKG+W+L
Sbjct: 538 SGGHGNAKNDSKSRDQHRQSLVVTCSGVGKDGTVRLVRNGVGMREHAEVEMPGIKGMWSL 597
Query: 225 SIGSPKNLDNTLVLSFVGHTRVLTLSG-----------------AEVEETEMGGFTSDQQ 267
D+ LV SFV TR+L + + E + GF+S +
Sbjct: 598 RRTFADEDDSFLVQSFVRETRILGVQSGGEAEMEEEDDEDQEEGGALAEVTIPGFSSSKS 657
Query: 268 TFYCGNV---DPRTVLQVTPSAAILISTESKARVSSWEPPNGKS-----------ISVVS 313
T + GN+ +LQV + L+++E+ V+ W P + + I+V S
Sbjct: 658 TLFAGNLLVGSSDLLLQVVEDSVRLVNSETLELVTEWSPFSNDNEGSDDDEPLGFITVAS 717
Query: 314 CNKN-QVLCA-TGCDVYYLEVHGS---EIKQLAHRALEYEVACLDISPLSNEETSSEPAK 368
N + Q++ A G + YL V G I++L L+ E++C+D++P +
Sbjct: 718 ANSSGQIVVALRGGTLVYLVVEGDASPSIRRLKRVTLDREISCIDLNPFDDTAVGGNTMD 777
Query: 369 ------AQLAAVGLWTDISARLLSLPS----LEEVCKEPLG------------------G 400
++L AVGLW D S RLL L S L++V + LG G
Sbjct: 778 VDGGHHSKLVAVGLWDDFSVRLLDLSSSHSVLDQVLQINLGVGNDNGGGKSAEEDDDELG 837
Query: 401 E----IIPRSILMTCFEGHC---------------------YLLVALGDGSMFYFSL--D 433
E ++ RS+ + + H LLV LGDG + F++
Sbjct: 838 ESSQHMMARSLCLVTLDSHSSNSSSLINKKSDSFTGSNKVDMLLVGLGDGKLISFAVVHS 897
Query: 434 PASGR---LTDKKKVTLGTQPTVLKTFRSLST-TNVFACSDRPTVIY--------SSNHK 481
AS + + +K+V+LGTQ L S S T V A DRPTV+Y +SN K
Sbjct: 898 AASSKKWFVHSRKEVSLGTQGIHLIPMSSGSNGTCVLATGDRPTVVYLTGGNGGGNSNPK 957
Query: 482 LVFSNVNLR------QVNHMCSLNAE--------------------SYPDSLALATDSTF 515
L +S ++L + H N ++ SL +A ++T
Sbjct: 958 LCYSTISLTVEDDDDEDGHASHRNVSVNVASSFRSSLLFSSSNSTSNHNYSLCVADETTL 1017
Query: 516 TFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
G ID+IQKLH+ + LG PRRIAY E+ + + V
Sbjct: 1018 RLGMIDDIQKLHVTSYKLGMTPRRIAYHEAGRVYCV 1053
Score = 113 bits (282), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 136/288 (47%), Gaps = 59/288 (20%)
Query: 985 GSTKQSTANQ-PADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT 1043
G+ K NQ A+ NM V D +TFE ++ L P E LSL+S T
Sbjct: 1058 GNAKGGNNNQVGAEINMGNCVR---FFDDSTFEEINQIDLEPFETILSLVSVSLCTSSQT 1114
Query: 1044 ---------------YFVLGTAVVHPEENEPKQGRIIIFHYDDGK--------------- 1073
Y ++GTA +P+E+EP QGRI++ + G+
Sbjct: 1115 LTQSNSKQDTSEYKPYILIGTAYAYPDEDEPTQGRILVVECNSGEAEPHLKSDDDMEDTY 1174
Query: 1074 ---LQQIAEKEIKGACYSMCEF-NGKLLASINSTVRLFEWT----NEKELR-LECSHFNN 1124
++ + + +G YS+ F G +LA++NS L + EL+ + H +
Sbjct: 1175 SRYVRHVTQMPTRGGVYSISPFYGGTVLATVNSKTHLCRLSIGCDQIGELKFVGAGHHGH 1234
Query: 1125 IIALFLKV----------------KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPN 1168
+++LF+K +VGDLMRS++L++Y+ EE++RDYN N
Sbjct: 1235 MLSLFVKSLAGSESESESSGTNRQAKQLAIVGDLMRSISLVEYQPKHNVIEELARDYNAN 1294
Query: 1169 WMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+ T++E+L + +LG+E NLF+ + ++ A+S+E R L VG HL
Sbjct: 1295 FCTAVEMLTNGTYLGSEGFNNLFVLRHNANASSEEARVRLDTVGEYHL 1342
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 53
+G++R++RNG+G+ EHA +++PGIKG+W+L D+ LV SFV TR+L
Sbjct: 568 DGTVRLVRNGVGMREHAEVEMPGIKGMWSLRRTFADEDDSFLVQSFVRETRIL 620
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 100/273 (36%), Gaps = 95/273 (34%)
Query: 773 GKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFEL-------------------- 812
G +E G I +DP R I L +Y+G +IP+ + +++
Sbjct: 176 GCQAECGPIMTVDPLNRCIALHVYDGWVTVIPINR-GYDVGSARASSSSSRGGKPRGLST 234
Query: 813 ----KASSIRMEELEIQDVQFLHGCQN----------------PTIICIHQDVNG-RHVK 851
A R+EE + + FL N P ++ +HQD G +HV
Sbjct: 235 GPFGDAFHARVEERTLLSMTFLRPKSNAGGRGNSGGGVSSYYHPQLVVLHQDARGFQHVI 294
Query: 852 THEISLKEKEF------------TKTPWKQDNIEMEASLVIPVPE--------------- 884
TH + L +K T K D +M +S + P E
Sbjct: 295 THGVDLAKKGLVLHGSPNDSAVATMMGVKSDEGKMPSSTMPPANERLKKSRIDGGSAALI 354
Query: 885 --------PLGGAIIIGQESILY-HSGKSYVAVAPQIIKSSTIVCYAKV-DANGER---- 930
LGG +I+GQ I Y H+G+ P I SS + Y V D + +R
Sbjct: 355 AIPPSKTSALGGVLILGQRQITYHHTGEGITRTLP--IGSSLLYSYCLVADKDADRNINN 412
Query: 931 ------YLLGDLAGRLFMLLL----EKEEKMDG 953
Y+LGD GR+ +L + E K DG
Sbjct: 413 NAPVLKYILGDSTGRIHLLTILLNVTPEGKGDG 445
>gi|342318986|gb|EGU10938.1| DNA damage-binding protein 1b [Rhodotorula glutinis ATCC 204091]
Length = 1102
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 250/513 (48%), Gaps = 43/513 (8%)
Query: 76 NGWS----ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNG 131
WS +R LLGD+ G+LF + L + E +G V + +G+ + + L
Sbjct: 294 TAWSWRNNDRLLLGDIYGKLFEVNLRRAE--NGV--VSGISAQDVGDAASASAIVPLGAT 349
Query: 132 VVFVGSRLGDSQLVKLNRSPDEN---GTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVT 188
V++ SR GDSQ+V+ DE +++++S +N+API+D+ +V Q VT
Sbjct: 350 TVYLASRFGDSQIVRFVSGEDEGMAGPAELALVDSISNIAPIVDLCIVSAHGQAANYAVT 409
Query: 189 CSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLT 248
CSG +K GSLR+IR G+G+ E A ++ G++ W+L+ +P + LVL F TRV
Sbjct: 410 CSGAYKTGSLRVIRRGVGLSELAALEADGVQQAWSLTSPAPST-EPILVLGFFSETRVFR 468
Query: 249 LS-----GAE---VEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSS 300
+S GAE ++E ++ F S T + GNV V +VT A + S + S
Sbjct: 469 MSAGDPAGAEAVQIDEMDLQLFASPGPTIFAGNVGSMLV-RVTAEAVMYASDRGE---ES 524
Query: 301 WEPPNGKSISVVSCNKNQ--VLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLS 358
W+ + I+ + VL G + L+ + + A E+++A + +
Sbjct: 525 WKATSAGKITAAAAAGGDHLVLAFDGGFLQLLKAKNGTFTESGNIAFEHDIASVSL---- 580
Query: 359 NEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-EGHCY 417
+E + A VGLWT + L+ +P L + + + RS + F +G
Sbjct: 581 -----AETSAGAFAVVGLWTSQAVHLVGIPDLAVYASQKITSTFLIRSAALINFGDGDYT 635
Query: 418 LLVALGDGSMFYFSLDPASGRLTDK--KKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVI 475
L V LGDG++ + +D A+ + D K + LG +P +L S + A SDRPTVI
Sbjct: 636 LFVGLGDGTLASYRVDLAAPAVIDSTGKMIALGRRPLLLSEIGPESAKVLLAVSDRPTVI 695
Query: 476 YSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGE 535
+ +L +S+ V+ + +++ + D +AL + G +D +QK+ +RTVPL E
Sbjct: 696 SKARDRLNYSS----GVSSVANISHPALGDLVALVSREGVQIGRMDTVQKVDVRTVPLAE 751
Query: 536 -APRRIAYQESSQTFGVITTRIDIQEADGSTPV 567
PRRI Y S+ F V +R DI G V
Sbjct: 752 DEPRRIVYDPVSRKFCVACSRRDIDRHTGQQAV 784
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 1095 KLLASINSTVRLFEWTNEKELRLECSHFNNIIALFL-KVKGDFILVGDLMRSLTLLQY-K 1152
K A +++ V ++ +E L L+ + +A L + D ++VGD +RSLT+L+Y
Sbjct: 837 KFRAPVSAAVAVWTIDSEGALALKSTWSGAFVAYTLARAPDDTLIVGDALRSLTVLRYTA 896
Query: 1153 TMEGSFEEISRDYNPNWMTSIEIL-----DDELFLGAENSYNLFICQK--DSAATSDEDR 1205
+ + E+++DY +M +E L + ++GAE NLF + AA + +
Sbjct: 897 SPQPKLLEVAKDYRSRYMVGVEDLGRDSTGADRYIGAETDLNLFAVSRHPQQAAGNLANA 956
Query: 1206 THLQEVGTVHL 1216
LQ+ G HL
Sbjct: 957 ATLQDAGAFHL 967
Score = 47.4 bits (111), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 2 GSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
GSLR+IR G+G+ E A ++ G++ W+L+ +P + LVL F TRV +S +
Sbjct: 417 GSLRVIRRGVGLSELAALEADGVQQAWSLTSPAPST-EPILVLGFFSETRVFRMSAGD 473
>gi|219125301|ref|XP_002182922.1| damage-specific DNA binding protein 1 [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217405716|gb|EEC45658.1| damage-specific DNA binding protein 1 [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 1284
Score = 206 bits (523), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 183/566 (32%), Positives = 263/566 (46%), Gaps = 107/566 (18%)
Query: 76 NGWSERYLLGDLAGRLFM----LLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNG 131
NG RYLL D G L M L+++K V +++ LG ++ + YL G
Sbjct: 313 NGGLPRYLLADEFGNLHMVTIVLVVDK---------VVALQIDTLGSCTLATSIAYLREG 363
Query: 132 VVFVGSRLGDSQLVKLNRSP-----DEN------GTYVSVMESFTNLAPIIDMVVV---- 176
+VFVGS LGD QL++++ P DE +Y+SV+E +T+L PI+D +V
Sbjct: 364 LVFVGSTLGDPQLIQIHDEPIVDVEDEEDMVGAESSYLSVVEEYTHLGPILDFDLVPTAP 423
Query: 177 ---------DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIG 227
+ Q Q+VT SG K GSLR+IRNGIG+ E A +++PGI+ +W+L
Sbjct: 424 GGGGLGQTEGIHGPSQSQVVTASGSSKSGSLRLIRNGIGMNESAAVEIPGIQNVWSLRRS 483
Query: 228 SPKNLDNTLVLSFVGHTRVLTLS----------------GAEVEETEMGGFTSDQQTFYC 271
D LV SFV TRVL ++ G +EE + G S T Y
Sbjct: 484 FADVDDTYLVQSFVHETRVLGVTTMDDMSQDEKEGDVAPGGTLEEVFLIGLKSSCATLYV 543
Query: 272 GNVDPRT--VLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNK-NQVLCA-TGCDV 327
GNV +LQ+T + E A + +W P+G +I+V + N+ Q+ A G V
Sbjct: 544 GNVQAHQNGLLQITEGEVRFATME--AVLDTWLVPSGAAITVGTANEAGQIAVALNGGKV 601
Query: 328 YYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARL-LS 386
YL++ +I++ + + +E EV+CL+++P + +S AVGLW D + RL L
Sbjct: 602 LYLKIEEGKIRECSGQQMEREVSCLNLNPFAATSHTS-----SFLAVGLWDDFTVRLFLC 656
Query: 387 LPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSL--DPASGRLTDKKK 444
L +L+ S+ T + L V LGDG++ F++ AS + KK+
Sbjct: 657 LITLDFSSGTSGNTTSTSTSLSSTGSGVN-MLFVGLGDGTLISFAVVERGASIFVQSKKE 715
Query: 445 VTLGTQPTVLKTF-RSLSTTNVFACSDRPTVIYSS----------NHKLVFSNVNLRQ-- 491
V LGTQ L T V A DRPTVIY + N KL +SNVNL
Sbjct: 716 VCLGTQRIDLVPLCTEQGGTCVLATGDRPTVIYLAGVGGISANQFNPKLCYSNVNLSAGD 775
Query: 492 -----------------VNHMCSLNAESYPD---------SLALATDSTFTFGTIDEIQK 525
VN ++ D SL +A DS G ID+IQK
Sbjct: 776 DEEEDDVSRPPSQQSIVVNVATPFSSSLLFDSATGGSQRYSLCVADDSFLRMGIIDDIQK 835
Query: 526 LHIRTVPLGEAPRRIAYQESSQTFGV 551
LH+ T LG AP RI + + F V
Sbjct: 836 LHVTTCRLGMAPCRIVHCADGRLFAV 861
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 133/233 (57%), Gaps = 26/233 (11%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKF--------GEDP--NTYFVLGTAVVHPEENEP 1059
+D F+ +H L P E LS++ + + P + ++GTA P+E+EP
Sbjct: 887 MDDANFDDIHRVDLEPFEMILSMVYATLRIPSDGDQSDQPVHRPFLLVGTAYAMPDEDEP 946
Query: 1060 KQGRIIIF--HYDDGK--------LQQIAEKEIKGACYSMCEF-NGKLLASINSTVRLFE 1108
+GRI+++ D+ ++QI E +G YS+C+F +G L ++NS + +
Sbjct: 947 SRGRILVYSCQADEASGTPTSTRAVRQITEMSTQGGVYSICQFYDGNFLCTVNSKTHVVQ 1006
Query: 1109 WTNE-KELRLE---CSHFNNIIALFLKVKGD-FILVGDLMRSLTLLQYKTMEGSFEEISR 1163
+ LRLE H +I++LF+K + +VGDLMRS++L+QY + EE++R
Sbjct: 1007 IVADCGVLRLEYVGIGHHGHIVSLFVKSRAKPLAIVGDLMRSVSLMQYYPQHETLEEVAR 1066
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
D+NPNW T++E+L D++++GAEN NLF +++ AATS+E R L +G HL
Sbjct: 1067 DFNPNWTTAVEMLTDDVYIGAENWNNLFCLRRNKAATSEEIRCRLDNIGEFHL 1119
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 135/302 (44%), Gaps = 49/302 (16%)
Query: 689 LNLVVAKNNRIEIHTV--TPEGLRP---VKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
L+++VAK+ R+E+ + T EGL P + + + G+I + F+ +F++T R
Sbjct: 36 LDVLVAKSRRLEVRQLRTTTEGLSPFPILASVPINGRIVGLVPFKVHGSDTSYVFVLTAR 95
Query: 744 YNAMIL---ECRGDIDNLEILTKAHGNVSDR----IGKPSENGIIAIIDPEARVIGLRLY 796
+L ++T A G + + +G+ +E+G I ID R I L +Y
Sbjct: 96 QQYAVLAYDRTNSGSAAYPLVTLASGTLQSQEHAVLGQEAESGPIVAIDHFHRCIALHVY 155
Query: 797 NGLFKIIP----LEKDNFELKASSIRMEELEIQDVQFLHGCQN--PTIICIHQDVNG-RH 849
+GL IIP L R+EE I + FL P + +HQD G +H
Sbjct: 156 DGLLTIIPSTRTLASQQLLGTPFHCRIEERTILHLAFLQIPFEALPQLAVLHQDARGAQH 215
Query: 850 VKTHEISLKEKEF---------TKTPWKQ-DNIEMEASLVIPVPEPL-----------GG 888
+ +H I+ K K T W Q N++ +SL+IPVP GG
Sbjct: 216 ITSHVINWKRKNIFLYGSSSAPAATEWLQKSNVDGGSSLIIPVPAEAPPDFAPAKHRSGG 275
Query: 889 AIIIGQESILY-HSGKSYVAVAPQIIKSSTIVCYAKV--DANG--ERYLLGDLAGRLFML 943
+++GQ + + ++ + V PQ + +C ++ D NG RYLL D G L M+
Sbjct: 276 VLVVGQRQLTFINNNVTKVVPIPQALH----LCVEELPADPNGGLPRYLLADEFGNLHMV 331
Query: 944 LL 945
+
Sbjct: 332 TI 333
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 2 GSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
GSLR+IRNGIG+ E A +++PGI+ +W+L D LV SFV TRVL ++
Sbjct: 452 GSLRLIRNGIGMNESAAVEIPGIQNVWSLRRSFADVDDTYLVQSFVHETRVLGVT 506
>gi|322706594|gb|EFY98174.1| DNA damage-binding protein 1 [Metarhizium anisopliae ARSEF 23]
Length = 1121
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 149/523 (28%), Positives = 258/523 (49%), Gaps = 65/523 (12%)
Query: 74 LWNGWSE----RYLLGDLAGRLFMLLLEKEEKMDGTF-------SVKEPKVELLGEISIP 122
++ W+E YLL D GRL +L +E + G ++ P G S
Sbjct: 227 IYVAWTEYDDVHYLLADDYGRLDILTIETATESTGIVVTGMAISPMRFPDSS--GCTSRA 284
Query: 123 ECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ- 181
L Y+ N ++F+ S GDSQL+++ D + + V ++ +N API+D ++D+ +
Sbjct: 285 SSLVYMGNDMLFLASHHGDSQLLRI----DIDAQVMVVAKALSNNAPILDFAIMDMGNRE 340
Query: 182 -----------GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSP 229
GQ ++V G + +GSLR IR+G+G+E+ +D + KG++ L
Sbjct: 341 GDSQFGNAFSSGQARIVAGCGAYHDGSLRSIRSGVGLEDQGILDEIQDTKGLFTLRSHQS 400
Query: 230 KNLDNTLVLSFVGHTRVLTL-SGAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAA 287
++D TLV+S V TRVL S +EE G T D +T N+ +LQVTP +A
Sbjct: 401 SHVD-TLVVSSVADTRVLRFDSAGGIEEVYAFQGLTLDMETLLAVNISDGQLLQVTPKSA 459
Query: 288 ILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEY 347
+L+ +ES + SW+ P+GK+I+ S NK L L + GS + L L
Sbjct: 460 VLLDSESGVNLCSWDAPSGKAITAASANKGWAL---------LSIDGSLLVSLN---LHD 507
Query: 348 EVACLDISPLSNEETSSEPAK----------AQLAAVGLWTDISARLLSLPSLEEVCKEP 397
+A + + S +E+S++P + + VG W + ++ L +L+ + EP
Sbjct: 508 NLAAV-LRDTSGDESSTQPDQISCLHAARDSPDIGVVGWWASGTISIVDLATLQPLHGEP 566
Query: 398 L----GGEIIPRSILMTCFE----GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT 449
L +PR I + LL+AL DG++ F + ++ +K VTLG+
Sbjct: 567 LRQTEDSASVPRDIALVQLHPPQVSGPTLLIALEDGNVVTFDMSIQGYTISGRKSVTLGS 626
Query: 450 QPTVLKTF-RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLA 508
P L + T NVFA ++ ++IYS+ ++++S ++ ++E++P+S+
Sbjct: 627 SPARLHVLPQEDGTCNVFATTEHASLIYSAEGRIIYSATTADDATYVAPFDSEAFPNSIV 686
Query: 509 LATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
L+TDS ID+ + H++T+ + E RR+AY + + FG+
Sbjct: 687 LSTDSHIRLSHIDKERLTHVKTLSVKETVRRVAYSPTLKVFGL 729
Score = 89.7 bits (221), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 125/247 (50%), Gaps = 22/247 (8%)
Query: 999 NMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF-GEDPNTY------FVLGTAV 1051
N EV + I+D+ F+ L +F +L ++ + E P++ F++GT+
Sbjct: 739 NEEVITSSFRIVDEIIFQELGKPFIFNTSTSLEMVETVIRAELPDSMGNLAERFIIGTSF 798
Query: 1052 VHP----EENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRL 1106
+ EEN+ + GRI++ D+ + + QI +KGAC + ++A ++ TV +
Sbjct: 799 ITDDDAIEENDTR-GRILVLGVDENRQVYQIVSHNLKGACRCLGTLGEHIVAGLSKTVVV 857
Query: 1107 FEWTNEK----ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTME----GSF 1158
+ + E L+ ++ L L + G+ I V DLM+SLTL+++ E
Sbjct: 858 YHYVEETTVFGSLQKLAAYRPASFPLSLDISGNIIGVVDLMQSLTLVEFIPSEDGSRAKL 917
Query: 1159 EEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVG 1218
EE +R Y P W TS+ LD E +L A+ N+ + Q++ A +++DR+ L EV + +G
Sbjct: 918 EETARHYQPGWATSVAHLDGERWLEADAQGNIIVLQRNPEAPTEQDRSKL-EVTSEMNIG 976
Query: 1219 DGLVQCR 1225
+ + Q R
Sbjct: 977 EQINQIR 983
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 730 PTDKK-DLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEA 788
P D + DLLFI T R+ + + + L+ + + +V+++ + S++ ++DP
Sbjct: 7 PKDSETDLLFIGTDRFQYFNVAWNPETNQLDTVEQTIEDVAEQYMRHSQSQNKCLVDPTG 66
Query: 789 RVIGLRLYNGLFKI--IPLEKD-NFELKA-SSIRMEELEIQDVQFLHG-CQNPTIICIHQ 843
+ + + L+ G+ + +P+ K +L+A +R+ EL ++ FLH +P I +++
Sbjct: 67 KFMAMHLWEGVLNVFRLPMRKGMTTKLEALDQVRLTELWMKASTFLHSQTGHPKIAFLYK 126
Query: 844 ---DVNGRHVKTHEISLKEKEFTKT---PWKQDNIEM-----EASLVIPVP--------- 883
D + + ++ + P ++ ++ AS++IPVP
Sbjct: 127 TQTDQEEARIAVYRLTKDDSRGNVARFDPHRERELDQIISDPYASMLIPVPFREEKRYHV 186
Query: 884 -------EPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDL 936
LGG +++G+ I Y +Y V+ + V + + D YLL D
Sbjct: 187 RHNEGAKAHLGGLLVVGETLITYFDSLTYSRVSSTLQDPKIYVAWTEYD--DVHYLLADD 244
Query: 937 AGRLFMLLLEKEEKMDG 953
GRL +L +E + G
Sbjct: 245 YGRLDILTIETATESTG 261
Score = 41.2 bits (95), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGA 58
+GSLR IR+G+G+E+ +D + KG++ L ++D TLV+S V TRVL A
Sbjct: 365 DGSLRSIRSGVGLEDQGILDEIQDTKGLFTLRSHQSSHVD-TLVVSSVADTRVLRFDSA 422
>gi|322700871|gb|EFY92623.1| DNA damage-binding protein 1 [Metarhizium acridum CQMa 102]
Length = 1121
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 260/521 (49%), Gaps = 61/521 (11%)
Query: 74 LWNGWSE----RYLLGDLAGRLFMLLLEKEEKMDGT----FSVKEPKV-ELLGEISIPEC 124
++ W+E YLL D GRL +L +E + G +V + + S
Sbjct: 227 IYVAWTEYDDVHYLLADDYGRLDILTVETTTESTGIVVTGMAVSPMRFPDSSAYTSRASS 286
Query: 125 LTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ--- 181
L Y+ + ++F+ S GDSQL+++ D + + ++++ +N API+D ++D+ +
Sbjct: 287 LVYMGDDMLFLASHHGDSQLLRI----DIDAQVMVLVKTLSNNAPILDFAIMDMGNREGD 342
Query: 182 ---------GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKN 231
GQ ++V G + +GSLR IR+G+G+E+ +D + KG++ L +
Sbjct: 343 SQFGNAFSSGQARIVAGCGAYHDGSLRSIRSGVGLEDQGILDEIQDTKGLFTLRSHESSH 402
Query: 232 LDNTLVLSFVGHTRVLTL-SGAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAIL 289
+D TLV+S V TRVL S ++EE G T D +T N+ +LQVTP +A+L
Sbjct: 403 VD-TLVVSSVADTRVLRFDSAGDIEEVYAFQGLTLDMETLLAVNISDGRLLQVTPKSAVL 461
Query: 290 ISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEV 349
+ +ES + SW+ P+GK+I+ S NK L L + GS + L L +
Sbjct: 462 LDSESGVNLCSWDAPSGKAITAASANKGWAL---------LSIDGSSLVSLN---LHDNL 509
Query: 350 ACLDISPLSNEETSSEPAK----------AQLAAVGLWTDISARLLSLPSLEEVCKEPL- 398
A + + S +E+S +P + + VG WT + ++ L +L+ + EPL
Sbjct: 510 AAV-LRDTSGDESSGQPDQISCLHAARDSPDIGVVGWWTSGTISIVDLATLQPLHGEPLR 568
Query: 399 ---GGEIIPRSILMTCFE----GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQP 451
+PR I + LL+AL DG++ F + ++ +K VTLG+ P
Sbjct: 569 QTEDSASVPRDIALVQLHPPQVSGPTLLIALEDGNVVTFDMSMQGYTISGRKSVTLGSSP 628
Query: 452 TVLKTF-RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALA 510
L + T NVFA ++ ++IYS+ ++++S ++ ++E++P+S+ L+
Sbjct: 629 ARLHVLPQEDGTCNVFATTEHASLIYSAEGRIIYSATTADDATYVAPFDSEAFPNSIVLS 688
Query: 511 TDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
TDS ID+ + H++T+ + E RR+AY + + FG+
Sbjct: 689 TDSHIRLSHIDKERLTHVKTLSVKETVRRVAYSPTLKVFGL 729
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 129/247 (52%), Gaps = 22/247 (8%)
Query: 999 NMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF-GEDPNT------YFVLGTAV 1051
N EV + I+D+ F+ L +F +L ++ + E P++ F++GT+
Sbjct: 739 NEEVITSSFRIVDEIIFQELGKPFIFNTSTSLEMVETVIRAELPDSTGNLAERFIIGTSF 798
Query: 1052 VHP----EENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRL 1106
V EEN+ + GRI++ D+ + + QI +KGAC + ++A ++ TV +
Sbjct: 799 VTDDDAIEENDTR-GRILVLGVDENRQVYQIVSHNLKGACRCLSTLGEHIVAGLSKTVVV 857
Query: 1107 FEWTNEK----ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY-KTMEGS---F 1158
+ + E L+ ++ L L + G+ I V DLM+SLTL+++ + +GS
Sbjct: 858 YNYVEETTVFGSLQKLAAYRPASFPLGLDISGNIIGVVDLMQSLTLVEFIPSKDGSRAKL 917
Query: 1159 EEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVG 1218
EE++R Y P W TS+ LD E +L A+ N+ + Q++ A +++DR+ L+ ++ +G
Sbjct: 918 EEVARHYQPGWATSVTNLDGERWLEADAQGNIIVLQRNPEAPTEQDRSKLEVTSEIN-IG 976
Query: 1219 DGLVQCR 1225
+ + Q R
Sbjct: 977 EQINQIR 983
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 730 PTDKK-DLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEA 788
P D + DLLFI T R N + + + L+ + + +V+++ + S++ ++DP
Sbjct: 7 PKDSETDLLFIGTDRLNYFNVAWNSETNQLDTVEQTIEDVAEQYMRHSQSQNKCLVDPTG 66
Query: 789 RVIGLRLYNGLFKI--IPLEKD-NFELKA-SSIRMEELEIQDVQFLHG-CQNPTIICIHQ 843
+ + + L+ G+ + +P+ K +L A +R+ EL ++ FLH +P I +++
Sbjct: 67 KFMAMHLWEGVLNVFRLPMRKGITTKLVALDQVRLTELWMKASTFLHSQTGHPKIAFLYK 126
Query: 844 ---DVNGRHVKTHEISLKEKE---FTKTPWKQDNIEM-----EASLVIPVP--------- 883
D + + ++ + + P ++ ++ AS++IPVP
Sbjct: 127 TQTDQEEARIAVYRLTKDDNRGNVASFDPHRERELDQVISDPYASMLIPVPFREEKRYHV 186
Query: 884 -------EPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDL 936
LGG +++G+ I Y +Y V+ + V + + D YLL D
Sbjct: 187 RNNEGAKAHLGGLLVVGETLITYFDSLTYSRVSSTLQDPKIYVAWTEYD--DVHYLLADD 244
Query: 937 AGRLFMLLLEKEEKMDG 953
GRL +L +E + G
Sbjct: 245 YGRLDILTVETTTESTG 261
Score = 41.2 bits (95), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGA 58
+GSLR IR+G+G+E+ +D + KG++ L ++D TLV+S V TRVL A
Sbjct: 365 DGSLRSIRSGVGLEDQGILDEIQDTKGLFTLRSHESSHVD-TLVVSSVADTRVLRFDSA 422
>gi|358056808|dbj|GAA97158.1| hypothetical protein E5Q_03834 [Mixia osmundae IAM 14324]
Length = 1243
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 226/458 (49%), Gaps = 23/458 (5%)
Query: 116 LGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNR--SPDENGTYVSVMESFTNLAPIIDM 173
LG++ P LT++ + VFVGS GDS LV + S VSV+ + NLAPI+D
Sbjct: 446 LGKVPSPTSLTHIADEYVFVGSYYGDSSLVAIPALTSDGMECDSVSVISAMANLAPIVDF 505
Query: 174 VVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLD 233
VV + GQ LVTCSG GSLR++R G+G+ A IDLP ++ W L + S
Sbjct: 506 CVVT-DDVGQSHLVTCSGAKNSGSLRLVRQGVGLSILATIDLPAVQNAWPLKLASSSIKH 564
Query: 234 NTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC---GNVDPRTVLQVTPSAAILI 290
+ +++SF+ +++L+L + E T + T Y G+ + + T A + +
Sbjct: 565 DAILVSFLDRSQLLSLCNGNLSELASPALT--EPTLYAGTLGDAGAQVAICATAKAILRL 622
Query: 291 STESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYL-EVHGSEIKQLAHRALEYEV 349
S E + + W P G I+ S + + +L AT L + + I + EV
Sbjct: 623 SIEKPSEL--WTSPTGDLITAASSDGSSLLLATSSKALVLMTLSPNGIALTTTKQTISEV 680
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILM 409
+CL + +Q+AAV W+ + L SLP LE V L + +P+S+L
Sbjct: 681 SCL--------AAWTTTTGSQIAAVASWSTNAILLYSLPHLEPVTGAELSFDHLPQSMLF 732
Query: 410 TCFEGHC-YLLVALGDGSMFYFSLDPASGRL--TDKKKVTLGTQPTVLKTFRSLSTTNVF 466
FE +L V LG G + F +D ASG + +K VTLG +P +L + VF
Sbjct: 733 QKFEDDAVHLFVGLGSGDLISFGIDAASGAVLPLSRKSVTLGKKPVLLSQCSAAGQPAVF 792
Query: 467 ACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKL 526
A +DRPTV+ S +L +++ N R + + ++A + SL L + F D + L
Sbjct: 793 AVTDRPTVVSRSAGRLSYASDNRRTLVAINQIDALRFEQSLMLVSPEGIQFARADGNESL 852
Query: 527 HIRTVPLGE-APRRIAYQESSQTFGVITTRIDIQEADG 563
H+R++ LGE PR+IA+ + + V+ + I + G
Sbjct: 853 HVRSLSLGELQPRKIAHSAELRAYAVLCLQETIDRSTG 890
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 11/221 (4%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHP--EENEPKQGRIIIF 1067
+D + F +L + L E+ +L + +F +GTA + EPK+GR++ F
Sbjct: 901 VDASDFALLDSFDLQSDEHGTALETVSL--HGAAHFAVGTAFSDRTVDAREPKKGRVLTF 958
Query: 1068 HYDDGKLQQIAEKEIKGACYSMCEFNGKLLASI-NSTVRLFEWTNEKELRLECSHFNNII 1126
D K +Q ++G + +C+ LA+I N+ V++F T + + +
Sbjct: 959 MRDGDKFEQHVHAVLEGGVFGLCQLPNSFLAAIANAQVKVFHVTEQAHIDQMTCWAGTFL 1018
Query: 1127 ALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL--DDELFLGA 1184
A + + I+VGDL RS+ LLQ+ + + E++R+++ N M+++E L D+ ++G
Sbjct: 1019 AQSISSRDSQIIVGDLYRSVVLLQWDEAKDTLSEVAREHHVNGMSAVEFLGFTDDRYIGT 1078
Query: 1185 ENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLVQCR 1225
E N+F K T +R + E + +G+ + + R
Sbjct: 1079 EQELNIFTLTK----TKTRERIDILETEGMFHIGEYVTRIR 1115
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 59/235 (25%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
NL+++K NRIE+HT+ P GLR EI L+G I ++ R L ++T + +L
Sbjct: 61 NLILSKLNRIEVHTIEPTGLRLALEIPLFGTILDLQPIRFKDRSTSSLLLLTTSLHFSVL 120
Query: 750 ECRGDI------------DNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYN 797
D N + +A +VS+R G+ SE ++DP R + L +Y
Sbjct: 121 TYEPDFLTPASGTRSLGWSNARVQDEATLSVSERAGRQSEEAQTILVDPHNRCVLLHIYC 180
Query: 798 GLFKIIPLEK-------------------------------------------DNFEL-K 813
GL +++P++ D ++ +
Sbjct: 181 GLIRVLPIKSSAGAASKPSRRRSSAAAPVGELSSSLKKSSGKARASAAASAESDGIDVFR 240
Query: 814 ASSIRMEELEIQDVQFLHGCQN--PTIICIHQDVNGRHV-KTHEISLKEKEFTKT 865
+ +IR+ L ++ + FL ++ PTI +H + G++V H ISLK+KE +
Sbjct: 241 SYNIRLPYLNVKHIAFLPLPESSLPTIALLHTNFLGQNVLSIHAISLKDKELVNS 295
Score = 46.6 bits (109), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 2 GSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
GSLR++R G+G+ A IDLP ++ W L + S + +++SF+ +++L+L
Sbjct: 527 GSLRLVRQGVGLSILATIDLPAVQNAWPLKLASSSIKHDAILVSFLDRSQLLSL 580
Score = 42.4 bits (98), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 591 PGSTKQSTANQPADFNMEVEVHNLLIIDQNTFERNFTSSTD-----LNLVVAKNNRIEIH 645
P + Q+TA Q N ID + + + +D NL+++K NRIE+H
Sbjct: 23 PDQSNQTTARQATTPNA---------IDGSPVDSGCRTGSDSTEPAQNLILSKLNRIEVH 73
Query: 646 TVTPEGLRPVKEIFLYGKIAVMKFFR 671
T+ P GLR EI L+G I ++ R
Sbjct: 74 TIEPTGLRLALEIPLFGTILDLQPIR 99
>gi|402223178|gb|EJU03243.1| hypothetical protein DACRYDRAFT_115454 [Dacryopinax sp. DJM-731
SS1]
Length = 1175
Score = 202 bits (514), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 156/518 (30%), Positives = 248/518 (47%), Gaps = 50/518 (9%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
E+ L+ D G+L++L L + + S++ E LGEIS P +T+L + FV S+
Sbjct: 314 EKLLVSDEYGKLYLLALHRRQSEGPVVSIQR---EALGEISSPSSITHLTSSYFFVTSKC 370
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQL+ L S ++V+++ NLAPI D VV D E+ GQ Q+VT SG GSLR
Sbjct: 371 GDSQLISLTPSAICGTGNIAVLDTHLNLAPISDFVVTDPEKIGQQQIVTASGRMNTGSLR 430
Query: 200 IIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSG------- 251
++R+G+ EE ++ + + I+ L I LV S + T + ++ G
Sbjct: 431 VVRSGVAFEELGLLEQVMNTRSIFPLKINFDAEYHLYLVTSSLHRTTLYSMRGDDSSPQF 490
Query: 252 AEVEETEMGGFTSDQQTFYCGNVDPRTV-LQVTPSAAILISTESKARVSSWEPPNGKSIS 310
EV+E+E G T GN+ + +QVT + + I + + S W+P +
Sbjct: 491 EEVDESEARGIVRQVPTLAAGNIREDDIFVQVTAGSVVAIDLITWEQRSIWKP----HVE 546
Query: 311 VVSCNKNQVLCATGCDVYYLEVH----------GSEIKQLAHRALEYEVACLDISPLSNE 360
+V N G YL VH ++ K L E++C+ + P +
Sbjct: 547 IVCAAVNGQRVVAGLKGGYL-VHLIPQRDQFIVANDWKSPGSWGLT-EISCIALDPTLSA 604
Query: 361 ETSSEPAKAQLAAVGLWTDISARLLSLPS----LEEV-CKEPLGGEI-IPRSILMTCF-- 412
E AA+G W ++ L EE+ EP+ E +P S ++T F
Sbjct: 605 EL------GNYAAIGFWGTNQVKIFYLGDETHRFEELKLAEPISPEDHLPVSTILTTFGT 658
Query: 413 EGHCYLLVALGDGSMFYFSLDP------ASGRLTDKKKVTLGTQPTVLKTFRSLST-TNV 465
+LLV LG+G++ ++L S R TDKK +LGT+P +L L +N+
Sbjct: 659 SNRPHLLVGLGNGTISSYALKTEIVLGEPSVRATDKKIFSLGTKPIMLNACTDLGRESNI 718
Query: 466 FACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQK 525
FAC DRP +++ N +L S + LR ++ L+ +P S A+ ST G I E QK
Sbjct: 719 FACGDRPALLFLKNDRLTASPIKLRDIHAGSVLHIPQFPSSFIFASASTLLIGQIRESQK 778
Query: 526 LHIRTVPLG-EAPRRIAYQESSQTFGVITTRIDIQEAD 562
+ +RT+ LG + P R+ Y + +GV+ R ++ D
Sbjct: 779 IDVRTISLGLDTPIRLTYHRGLRAYGVVCQRKELNRED 816
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
Query: 999 NMEVEVHNLLIIDQNTFEILHAHQLFPGEYAL--SLISSKFGEDPNTYFVLGTAVVHPEE 1056
+ E+ + + D TFE L+ P E + + I GE+ + + V+GT E
Sbjct: 817 DREIYSSSFKLFDDITFEYLNNFTARPDEQMMCVTTIPDSTGEEDSDFLVVGTYEATGAE 876
Query: 1057 NEPKQGRIIIFH-YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW-TNEKE 1114
+ +GRI+IF + KL+ + ++ G Y++ L A+IN T+++F + +
Sbjct: 877 EDVSKGRILIFEEVPNRKLKLVVSHDVGGCVYAVTNVGANLAAAINGTLQVFSLHRSHDD 936
Query: 1115 LRLE--CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTS 1172
+R+E + +A L +G+ +LVGD MR++ +L++ + E + DY W+ +
Sbjct: 937 IRIESVAKWSSAYVASSLICRGNTLLVGDAMRAVCILRWTGAK--LETLYHDYASLWIQT 994
Query: 1173 IEILDDELFLGAENSYNLFICQKDSAATSD 1202
+E +D+ +GAE + N+ +KD D
Sbjct: 995 LESIDEGGVIGAELNNNIVTWRKDGKLERD 1024
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 142/328 (43%), Gaps = 54/328 (16%)
Query: 689 LNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMI 748
+ LVVAK NR+E++ ++PEGL+ V ++ ++G I + + DK+ + + T + +
Sbjct: 27 VQLVVAKVNRVELYNLSPEGLKRVCDLEIWGTITNIAEVKR-EDKQSHILVTTDHPDPYL 85
Query: 749 LE-CRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
L N + ++ R G+ +E +I+ P RV Y G K+ +
Sbjct: 86 LSLAYSPTPNPQFEVVHSASLKARAGRIAEYCQTSIVHPSGRVAVTSAYTGSLKVTVFGE 145
Query: 808 DNFELKASSIRMEELEIQDVQFLH-GCQNP-TIICIHQDVNG-RHVKTHEIS-LKEKEFT 863
D + K +R+ E + FL +P T+ +H D NG RH+ T + + E T
Sbjct: 146 DG-KGKDIDVRIREQNLLSFAFLPLSTSSPFTLALLHIDQNGKRHLVTRSLKHVPEPGST 204
Query: 864 KTPWKQD-------------NIEMEASLVIPVPEPLGGA----IIIGQESILYHS----- 901
K+ D + E EA+ V+ VP P GA ++ G+ +++
Sbjct: 205 KSLASLDISEPTAHIPDINLDDEWEATSVVGVPPPRPGARAGVMVFGEGQARWYAVKEEG 264
Query: 902 -----GKSYVAVA-------------PQIIKSSTIVCYAKVDA----NGERYLLGDLAGR 939
GK + A P++ ++ + + ++ A + E+ L+ D G+
Sbjct: 265 APDPKGKRRSSTAGSPTQEKKGKSKPPRVEEAKVGLPWGRIAATCAIDEEKLLVSDEYGK 324
Query: 940 LFMLLLEKEEKMDGTFSVKEPKVELLGE 967
L++L L + + S++ E LGE
Sbjct: 325 LYLLALHRRQSEGPVVSIQR---EALGE 349
Score = 43.1 bits (100), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 620 NTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDL 679
++ +FT S + LVVAK NR+E++ ++PEGL+ V ++ ++G I + + DK+
Sbjct: 15 DSIRGDFTGSGSVQLVVAKVNRVELYNLSPEGLKRVCDLEIWGTITNIAEVKR-EDKQSH 73
Query: 680 LFIITQRTDLNLV 692
+ + T D L+
Sbjct: 74 ILVTTDHPDPYLL 86
>gi|171691144|ref|XP_001910497.1| hypothetical protein [Podospora anserina S mat+]
gi|170945520|emb|CAP71632.1| unnamed protein product [Podospora anserina S mat+]
Length = 1158
Score = 199 bits (506), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 146/517 (28%), Positives = 259/517 (50%), Gaps = 53/517 (10%)
Query: 72 GSLWNGWSE----RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
S++ W+E Y L D G L +L + DG VK + +G S L Y
Sbjct: 287 ASIFVKWAEYNVQTYFLADDYGSLHLLTI----NTDGA-EVKGMVLTKIGVTSRASELVY 341
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDE--NGTYVSVMESFTNLAPIIDMVVVDLERQG--- 182
L N ++FV S GDS+L +L+ S D+ + +++++++ +N+ PI+D V+D+ +G
Sbjct: 342 LGNEMLFVASHHGDSRLFQLDLSADKPADKPFLTLIQTISNIGPIMDFAVMDMGNRGGED 401
Query: 183 ----------QGQLVTCSGGFKEGSLRIIRNGIGIEEHACI--DL-PGIKGIWALSIGSP 229
Q ++V SG +K+GSLR +R+G+G+E+ + DL ++G+++L
Sbjct: 402 SQLGNEYSSGQARIVCGSGVYKDGSLRSVRSGVGLEDVGLLLEDLGQHVRGVFSLRGAVG 461
Query: 230 KNLDNTLVLSFVGHTRVLTL-SGAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAA 287
+ +TL +SF+ TRV S VEE + GF D QT N+ +LQVT
Sbjct: 462 EGKMDTLAVSFLTETRVFKFDSEGGVEEVGDFMGFGLDCQTLLARNLGGGMILQVTTRGV 521
Query: 288 ILISTESKARVSSWEPPNGKSISVVSCNKNQVLCAT-GCDVYYLEVHGSEIKQLAHRAL- 345
+LI ES V++W P + +I S N +L + G + + G+E++ + + +
Sbjct: 522 VLIDAESGVTVATWVPRDENTIINASANGEWLLLSVEGTGLVSISTAGNELRLVKEKDIS 581
Query: 346 -EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLE----EVCKEPLGG 400
+ +VAC+ ++P + VG WT + ++ L +LE E ++
Sbjct: 582 QQDQVACIHVAP----------QLQGIGVVGFWTSGTVSIIDLNTLEPMHGESLRQSQDD 631
Query: 401 EIIPRSILMTCFEGHCY----LLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKT 456
IPR +++ L +A+ DG + F++ A + KK+V LGT+ L
Sbjct: 632 ASIPREVVLVQVASPKVSGPTLFIAMEDGHVVTFNIS-ADFEFSGKKQVILGTRQARLHL 690
Query: 457 F--RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST 514
+ S ++ A ++ P++IY +++V+S V + +C + E++PDS+ +ATD+
Sbjct: 691 LPQDNDSIYSILATTEHPSLIYGEENRIVYSAVTAEEAMFICPFDTEAFPDSIIVATDTQ 750
Query: 515 FTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
ID ++ H+R +P+GE RRIAY + FG+
Sbjct: 751 IKISKIDRTRRTHVRELPMGEMVRRIAYSPKEKVFGL 787
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 140/305 (45%), Gaps = 38/305 (12%)
Query: 679 LLFIITQRTDLNLVVAKNNRIEIHTVTPEGL-RPVKEIFLYGKIAVMKFFRGPTDKKDLL 737
LL + + +LV+++ NR+E+ +P+GL + G IA+++ R + DLL
Sbjct: 17 LLANVYSEEEQSLVLSRTNRVEVWRPSPDGLLSQAHTTNVNGTIAMLQKLRPKDAETDLL 76
Query: 738 FIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYN 797
F+ T R+ L + +E T A + + + S++ AI+DP R I + L+
Sbjct: 77 FVGTDRFEYFTLYWNPETSQMET-TNATRDPGEHFMRNSQSLDRAIVDPSGRFIAMHLWE 135
Query: 798 GLFKIIPL---EKDNFELK-ASSIRMEELEIQDVQFLHG-CQNPTIICIHQ---DVNGRH 849
G+ I L + + +L IR+ EL I+ FLH +PT+ ++Q +
Sbjct: 136 GVMTIARLGTRKTNAAQLDWMGQIRLAELFIKASTFLHNETGHPTVAFLYQTSANAQDSK 195
Query: 850 VKTHEISLKEK-----EFTKTPWKQDNIEME---ASLVIPV-----------------PE 884
+ T+ ++ ++ EF + +I + A+++IPV +
Sbjct: 196 LATYRLTSDDRNTVASEFNAQKHRIIDITIADAGANMLIPVRKVEEEVKRHNFRNTGSAK 255
Query: 885 P-LGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFML 943
P LGG I++G+ +LY + V ++ K+S V +A+ N + Y L D G L +L
Sbjct: 256 PHLGGVIVVGETRLLYIDDVTKATVESKLDKASIFVKWAEY--NVQTYFLADDYGSLHLL 313
Query: 944 LLEKE 948
+ +
Sbjct: 314 TINTD 318
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 92/179 (51%), Gaps = 16/179 (8%)
Query: 1040 DPNTYFVLGTAVVHPEENEP----KQGRIIIFHYDDGKLQQIAEKEI-KGACYSMCEFNG 1094
+P F++GT+ + P+ + +GRI++F DD K + + KG C + +G
Sbjct: 845 NPAERFIVGTSFL-PDPDYAMTGEHRGRILVFGIDDNKDPYLILSHLTKGVCRCLEVLDG 903
Query: 1095 -KLLASINSTVRLFEW----TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLL 1149
K++A + TV + + T L S+ + + + +G+ I V D+M+S+TL+
Sbjct: 904 NKIVAGLAKTVAIARYDETSTTTATLTRLASYKPSTHPIQIAAQGNIIGVADVMKSMTLV 963
Query: 1150 QYKTMEGSFE---EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDR 1205
+Y M G + E++R + T++ +D + +L A++ NL + ++++ A EDR
Sbjct: 964 EY--MPGDKDRLVEVARHWQSAAGTALCHVDGDDWLEADDQGNLMMLRRNADAVVMEDR 1020
>gi|346970653|gb|EGY14105.1| hypothetical protein VDAG_00787 [Verticillium dahliae VdLs.17]
Length = 1160
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 150/501 (29%), Positives = 251/501 (50%), Gaps = 41/501 (8%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLL D G L +L LE +DG V ++ +G+ S CL Y+ N ++F+GS G
Sbjct: 298 RYLLADDYGNLHLLTLE----VDGVI-VTGLSLKTIGKTSRASCLVYMGNEILFLGSHHG 352
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLER-----------QGQGQLVTC 189
DSQL L D + ++++ N+API+D ++DL GQ ++V
Sbjct: 353 DSQLFTL----DLCAHTIRLIQTIPNIAPILDFSIMDLGNAGDSGVGNAFSSGQARIVAG 408
Query: 190 SGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWAL-SIGSPKNLDNTLVLSFVGHTRVL 247
G GSLR IR+ +G+E+ +D + ++G+++L S GS K +TLV+SF+ TRV
Sbjct: 409 CGVHHNGSLRSIRSSVGLEDIGILDDIQDVRGLFSLKSYGSEKV--DTLVVSFLTETRVF 466
Query: 248 TLS--GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPN 305
G E T G T DQ T + G++ LQ+T S+A+L +ES ++SW PN
Sbjct: 467 KFDADGGVEELTAFQGLTLDQPTLFAGSLANGHTLQITASSALLQDSESGVTINSWTSPN 526
Query: 306 GKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSE 365
G SI S N+ L + G + ++ ++ + +AL + D S +S S +
Sbjct: 527 GGSIVNASVNEKYALLSVGGSTL-VSLNLTQNFDVREQALGNGIGG-DGSQISCIHASRD 584
Query: 366 PAKAQLAAVGLWTDISARLLSLPSLE----EVCKEPLGGEIIPRSILMTCFE----GHCY 417
+ A+G W+ S +++L +L+ E K+ +PR +
Sbjct: 585 --FPDIGAIGFWSTGSVSVINLGTLQALHGESIKQNDDNVSVPRDLAFVQLHPPQLAGPT 642
Query: 418 LLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPT---VLKTFRSLSTTNVFACSDRPTV 474
L V+L DG + ++ LT +K VTLG++ VL + +NVFA ++ ++
Sbjct: 643 LFVSLEDGQVVSINVSKDDYSLTARKSVTLGSREAGLHVLPRPGAPGQSNVFATTEHSSL 702
Query: 475 IYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG 534
IYSS ++++S V ++ ++E +PD++ LATD +D ++ H+ + +G
Sbjct: 703 IYSSEGRIIYSAATAEDVTYIAPFDSEGFPDAIFLATDKNVRIANVDTERRTHVNPLHIG 762
Query: 535 EAPRRIAYQESSQTFGVITTR 555
E RR+AY + + FG+ T R
Sbjct: 763 ETVRRVAYSPALKAFGIGTIR 783
Score = 70.5 bits (171), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
Query: 1041 PNTYFVLGTA-VVHPEENEPK--QGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKL 1096
P F++GT+ + P+ NE +GRI++ D D I E+KGAC + KL
Sbjct: 838 PAERFIIGTSYLADPDVNESGDVKGRILVLGVDSDRNPYLIVSHELKGACRCLGVMGDKL 897
Query: 1097 LASINSTVRLFEW----TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY- 1151
+A ++ TV ++++ T +L + + + L + G+ I V DLM+S+TL+++
Sbjct: 898 VAGLSKTVVVYDYIEDSTTSGKLEKLTTFRPSTFPVDLDISGNMIGVADLMQSMTLVEFL 957
Query: 1152 ---KTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHL 1208
+ E +R + W T++ L +E +L A+ NL I ++ A ++ D+ +
Sbjct: 958 PAKDGRKAKLIERARHFEYIWATAVCSLGEESWLEADAQGNLMILERQPDAPTEHDQKQM 1017
Query: 1209 QEVGTVHL 1216
+ +HL
Sbjct: 1018 RTTSEMHL 1025
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 128/296 (43%), Gaps = 49/296 (16%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILE 750
LV AK NR+EI T EGL + + G I +++ R + D+LF+ T +
Sbjct: 28 LVTAKVNRLEISRPTSEGLTLLSSSVVCGTITLLQTLRPKASETDILFVGTDLFQ--YFT 85
Query: 751 CRGDIDNLEILTKAHGNVSDRIGKP----SENGIIAIIDPEARVIGLRLYNGLFKIIPL- 805
R D +++T+ V I +P +++ ++DP R + + L+ G+ I+ L
Sbjct: 86 ARWDPAQGKLVTE---QVIQDIAEPHMREAQSQDKCLVDPAGRFLAMHLWEGVMNIMQLG 142
Query: 806 --EKDNFELKA--SSIRMEELEIQDVQFLHG-CQNPTIICIHQ---DVNGRHVKTHEISL 857
+ NF L + +R+ EL ++ F+ +PTI ++Q D H+ + L
Sbjct: 143 TRKGANFRLDKDWAQVRLSELFMKASTFVPTETGHPTIAFLYQSSIDREDAHLAVYR--L 200
Query: 858 KEKEFTKT----PWKQDNIEME-----ASLVIPV------------------PEPLGGAI 890
E T P K +E+E A +IPV LGG I
Sbjct: 201 MEDGNTNVSKFDPLKNRELELEIPDPFARTLIPVSIVESDVKRYHRRDTTNASAQLGGLI 260
Query: 891 IIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLE 946
+ G+ ++Y + V ++ + + V +AK D RYLL D G L +L LE
Sbjct: 261 VAGETMLIYVDTLTKVKISKALDEPRIFVSWAKYDVT--RYLLADDYGNLHLLTLE 314
Score = 40.4 bits (93), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 14/87 (16%)
Query: 2 GSLRIIRNGIGIEEHACI-DLPGIKGIWAL-SIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
GSLR IR+ +G+E+ + D+ ++G+++L S GS K +TLV+SF+ TRV A+
Sbjct: 415 GSLRSIRSSVGLEDIGILDDIQDVRGLFSLKSYGSEKV--DTLVVSFLTETRVFKFD-AD 471
Query: 60 WGFHLLRGFSSL---------GSLWNG 77
G L F L GSL NG
Sbjct: 472 GGVEELTAFQGLTLDQPTLFAGSLANG 498
>gi|320593036|gb|EFX05445.1| uv-damaged DNA-binding protein [Grosmannia clavigera kw1407]
Length = 1504
Score = 197 bits (500), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 150/522 (28%), Positives = 250/522 (47%), Gaps = 61/522 (11%)
Query: 72 GSLWNGWSE----RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
S++ W+ YLL D G L +L + + V V +G+ S CL Y
Sbjct: 603 ASIFVAWARYDATHYLLADEYGTLHLLTI-----LVSGAVVDNLDVSPIGKTSRASCLVY 657
Query: 128 L-DNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ----- 181
L D ++FVGS GDSQL +L+ + G + ++ N+AP++D V+D+ +
Sbjct: 658 LPDRRLLFVGSHNGDSQLFRLDLAASPVGLHE--LQVLQNIAPVLDFTVMDMGNREDDQQ 715
Query: 182 -------GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLD 233
GQ ++VT SG K+GSLR +R+G+G+E+ + DL G++G+++L SP+
Sbjct: 716 LANEYASGQARIVTGSGVHKDGSLRSVRSGVGLEDIGILGDLGGVRGLFSLR--SPQTQQ 773
Query: 234 ----NTLVLSFVGHTRVLTLSG-AEVEETE-MGGFTSDQQTFYCGNVDPRT-----VLQV 282
+TLV SF+ TRV G E+EE E G QT N+ + +LQ+
Sbjct: 774 QQQVDTLVASFLTETRVFLFDGDGEIEEVEAFPGLNLGTQTLLATNLSSGSSSSSRLLQI 833
Query: 283 TPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCAT-GCDVYYLEVHGS-EIKQL 340
TP + L T S V+SW PP+ ++I S N VL + G + L + S +
Sbjct: 834 TPGSVTLAETASGTIVASWTPPDDRTIVSASANSRWVLLSVEGTTLVSLSLDNSLAVAAQ 893
Query: 341 AHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLE-----EVCK 395
++ACL + P + VG W ++ L +LE + +
Sbjct: 894 KEVGTTDQIACL----------HAAPQLLDVGVVGQWASGMVSVVDLATLEPKHGGKSLR 943
Query: 396 EPLGGEIIPRSILMTCF----EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQP 451
+PRSI++ L VA+ DG++ F++ P+ L+ +K V LGT+
Sbjct: 944 RRDDNASVPRSIVLAQVLPPGMAGPTLFVAMDDGNVITFAVSPSDLSLSGRKSVVLGTRH 1003
Query: 452 TVLKTF--RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLAL 509
L +T ++FA ++ P++IY S ++ ++ V N +C +A ++P ++A+
Sbjct: 1004 ARLHPLPQSDEATYSIFATTEHPSLIYGSEGRIAYAAVTAEDANFVCHFDAAAFPGAIAV 1063
Query: 510 ATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
ATDS D ++ H+R + +GE RRIAY + + F +
Sbjct: 1064 ATDSQIKLSRTDTTKQTHVRAIDMGETIRRIAYSATERVFAL 1105
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 39/216 (18%)
Query: 1040 DPNTYFVLGTAVVHP--EENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKL 1096
+P F++GT+ + ENE GRI++ D D ++ ++G C + + +
Sbjct: 1162 NPAERFLVGTSFMAAGSSENEHTLGRILVVGVDSDHSPYIVSSHRVRGPCRCLAMVDDLI 1221
Query: 1097 LASINSTVRLFEWTNEK----ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY- 1151
+A ++ TV L +T EL+ S+ + L V G I VGD+M+S L++Y
Sbjct: 1222 VAGLSKTVVLSRYTETSSMSGELKKVASYRTATYVVDLAVDGHMIAVGDMMKSTALVEYI 1281
Query: 1152 -----------------------KTMEGS--------FEEISRDYNPNWMTSIEILDDEL 1180
KT + S E +R Y +W T++ ++ +L
Sbjct: 1282 PATSGDGEDEEDDGAGDNKKGKGKTADRSKTIAEGPKLVERARGYQASWATAVCHVEGDL 1341
Query: 1181 FLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+L A+ NL + ++D + +D+ L+ VG ++L
Sbjct: 1342 WLEADGFGNLTMLERDVQGVTADDKRRLRTVGEMYL 1377
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 128/291 (43%), Gaps = 44/291 (15%)
Query: 695 KNNRIEIHTVTPEG-LRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRG 753
+ NR+EI +T + L ++G I++++ R K +LLF+ T R+ L
Sbjct: 345 QANRVEIWRITEDDHLVLFHSQMIFGTISMLQSLRPIDSKTELLFVGTDRFEYFTLTW-- 402
Query: 754 DIDNLEILT-KAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE--KDNF 810
D+++ + T +V ++ + S++ ++DP R + L L+ G+ ++ L+ +D
Sbjct: 403 DMESHSLRTVDTFQDVGEKHLRDSQSQDRCLVDPSGRFMALLLWEGVLTVLRLQTRRDRA 462
Query: 811 E-------LKASSIRMEELEIQDVQFLHG-CQNPTIICIHQDVNGR---HVKTHEISLKE 859
+ +R+ EL I+ FLH P I ++Q R + + ++ +
Sbjct: 463 RPDHMRHLVPMDQVRLSELFIKASTFLHSETGQPQIAFLYQSQGDRAEAKLSAYRLTAGD 522
Query: 860 KEFTKTPW---KQDNIEME-----ASLVIPVP--EP---------------LGGAIIIGQ 894
+ + + I M+ A+L+IPV EP LGG +++G+
Sbjct: 523 RNVDTGRFDANRDREISMDIDDPGAALLIPVEKVEPAKRHNVRNTATATANLGGLLVVGE 582
Query: 895 ESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLL 945
+LY + V + +S V +A+ DA YLL D G L +L +
Sbjct: 583 TRLLYIDSTTKCTVEVPLRAASIFVAWARYDAT--HYLLADEYGTLHLLTI 631
Score = 40.0 bits (92), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 7/62 (11%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLD----NTLVLSFVGHTRVLTL 55
+GSLR +R+G+G+E+ + DL G++G+++L SP+ +TLV SF+ TRV
Sbjct: 736 DGSLRSVRSGVGLEDIGILGDLGGVRGLFSLR--SPQTQQQQQVDTLVASFLTETRVFLF 793
Query: 56 SG 57
G
Sbjct: 794 DG 795
>gi|403177920|ref|XP_003888718.1| hypothetical protein PGTG_22575 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173263|gb|EHS64847.1| hypothetical protein PGTG_22575 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1326
Score = 195 bits (495), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 169/558 (30%), Positives = 276/558 (49%), Gaps = 70/558 (12%)
Query: 47 VGHTRVLTLSGAEWGFHLLR---GFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMD 103
G + LT G G H+LR G + +G +LLGDL G L L L+ +
Sbjct: 312 AGQSNQLTEQGV-IGGHVLRLPLGHYTCFCPVDGVPNCWLLGDLYGNLIFLFLK--QSTT 368
Query: 104 GTFSVKEPKVELL--GEISIPECLTYLDNGVVFVGSRLGDSQLVKL-----NRSPDENGT 156
GT P + G + PE L Y+ +G VF+ S GDSQL+KL + +PD +
Sbjct: 369 GT----PPSLHYFHAGHVPSPEALVYITSGFVFLASHYGDSQLLKLPSPTSSLNPDNTAS 424
Query: 157 -YVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDL 215
V+ +F NLAPI D V + + Q+VTCSG ++GSLR+I++GIGI E +++
Sbjct: 425 AQPEVITTFPNLAPISDFCVTEDRKSLVNQIVTCSGSHRDGSLRVIKHGIGIRESGSLEV 484
Query: 216 PGIKGIWALS----IGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETEM-GGFTSDQQTF 269
G++ +WAL + S ++ D+ LVLS TR L L+ +EE + GF SD T
Sbjct: 485 GGVQRLWALRSSTHVNSVEDFDDRLVLSCADCTRFLALNEDGTIEEIGLFNGFESDVPTI 544
Query: 270 YCGNV----DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSI-----SVVSCN---KN 317
GN+ D T + ++ +I+ ++ WEP + KSI SV +C K
Sbjct: 545 LAGNLLDGSDSTTRYSIQVTSRKIIAGDALV----WEPDDAKSITRAALSVTTCAVSLKE 600
Query: 318 QVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
QV+ D G +++ ++ L DIS L+ +++ + A AQ W
Sbjct: 601 QVVVLCIKD-------GKFVEKGTYKLLN------DISSLAIDQSENFVAAAQ------W 641
Query: 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGH----CYLLVALGDGSMFYFSLD 433
++S+ S +C+ + + S+ MT FEG C LL+ LGDG + +L
Sbjct: 642 VTNCIEIISVSSSSTICRVNTDSDFMVNSLKMTNFEGTESDGCRLLIGLGDGKIMNVALG 701
Query: 434 PASGRL--TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVI--YSSNHKLVFSNVNL 489
P + + TLG +P + R+ + ++A SD+PT+I +N + ++ V +
Sbjct: 702 PTGMHVEGDSPRFTTLGIRPIEFVSMRNATGEFLWANSDQPTIIDRIQNNGRFAYTPVTV 761
Query: 490 R--QVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG-EAPRRIAYQESS 546
+ V+ L+A + DSL LA++ G ++ +K++I + LG E PRRIA+ E
Sbjct: 762 QGGSVSSATGLHARFFQDSLVLASNDEIRIGKLNTTEKMNILKISLGNEQPRRIAHSEDM 821
Query: 547 QTFGVITTRIDIQEADGS 564
+ +GV+ R+++ + G+
Sbjct: 822 KAYGVVCARLELDQDTGT 839
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 32/228 (14%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFH 1068
+ D TF++L+ + P E S+ + K GE+ +FV+GT V+ E E GRI+
Sbjct: 848 VFDDETFQLLYTYNFGPMEQGSSIAAVKLGEEMIEHFVIGTGVIKSTEAEATIGRILAIR 907
Query: 1069 YDDGKLQQIAEK---------EIKGACYSMCEF-NGKLLASINSTVRLFEWTNEKELRLE 1118
+ K A+K ++ GA + NG +AS N+ V F R
Sbjct: 908 ELNSKQDLTAKKRHFELTNVGKLSGAVGGVGGLPNGMFVASANAFVHAFGLKKGDSGRAF 967
Query: 1119 CSHFNNIIA-----------LFLKVKGDF-----------ILVGDLMRSLTLLQYKTMEG 1156
S + ++A L G F +LVGDL +S+ LL++
Sbjct: 968 PSGTDTVLAGSVPEMDGGFRLLDTWGGGFVSQTVVTDGTKVLVGDLYKSVVLLEFDLEHL 1027
Query: 1157 SFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDED 1204
+RD++ + I + + F+ A++ +N+F Q DS + D
Sbjct: 1028 ELAVKARDFSAMSVRPIGAISEREFVAADSEFNMFTVQYDSPTSPGSD 1075
Score = 48.5 bits (114), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALS----IGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR+I++GIGI E +++ G++ +WAL + S ++ D+ LVLS TR L L+
Sbjct: 464 DGSLRVIKHGIGIRESGSLEVGGVQRLWALRSSTHVNSVEDFDDRLVLSCADCTRFLALN 523
Query: 57 --GAEWGFHLLRGFSS 70
G L GF S
Sbjct: 524 EDGTIEEIGLFNGFES 539
Score = 48.5 bits (114), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 137/343 (39%), Gaps = 90/343 (26%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+L++ K + IE++ + EGL+ + + ++ + + ++ TD L ++T N L
Sbjct: 28 SLILGKQSTIEVYGIESEGLKLLHQAKVFDVVEHINSYKKLTDSTSTLLVLTADLNLFTL 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPL---- 805
R + I+T A ++ +P++ +I+DP R + L NG+ +IPL
Sbjct: 88 --RFCPKSATIITTASISLHQIGARPADYVQTSIVDPHGRCVVLHALNGILHVIPLVPGC 145
Query: 806 --------------EKDNFELKASS---------------------IRMEELEIQDVQFL 830
+K N +S +R+ E+ +Q + F
Sbjct: 146 LSNLRNLDPVLSKRKKANVSTGLASHSRNLHPSHNDPDCEVYRSFQLRLNEVNVQALNFA 205
Query: 831 HGCQN--PTIICIHQDVNG-RHVKTHEISLK----EKEFTKTPWKQDNIEMEASLVIPVP 883
N PT++ ++ + G R +++ +I L+ E+EF + D +L+IP
Sbjct: 206 TLSPNYPPTLLVVYSNHLGDRVLRSRKIDLQAAHCEQEFFRGYHCCDP---ATALIIPFS 262
Query: 884 -------EPLG---GAIIIGQES--------ILYHS---------GKSYVAVAPQIIKSS 916
+ G GAI+IG+E+ + Y + ++ + Q+ +
Sbjct: 263 LTGEAGEDSDGVNNGAILIGEETAQLVRFGLVQYSASDDRGNIREAEATAGQSNQLTEQG 322
Query: 917 TI------------VCYAKVDANGERYLLGDLAGRLFMLLLEK 947
I C+ VD +LLGDL G L L L++
Sbjct: 323 VIGGHVLRLPLGHYTCFCPVDGVPNCWLLGDLYGNLIFLFLKQ 365
>gi|393243160|gb|EJD50676.1| hypothetical protein AURDEDRAFT_112250 [Auricularia delicata
TFB-10046 SS5]
Length = 1140
Score = 195 bits (495), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/488 (28%), Positives = 242/488 (49%), Gaps = 29/488 (5%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
ER L+GD GRL ++ + E T S LLG+ S TYLDNG+++VGS
Sbjct: 293 ERILIGDAYGRLVLVTVSLNENAAFTISPV-----LLGQTSPATTFTYLDNGILYVGSHF 347
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDSQLV+L+ + D +G+Y+SV+++++NLAPI+D V+VD+ Q Q+VTCSGG+ GSLR
Sbjct: 348 GDSQLVRLSTAADASGSYISVVKAYSNLAPIVDAVIVDINDSNQPQVVTCSGGYNTGSLR 407
Query: 200 IIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
+++ +E+ A ID P + I+ L S D +++S T+ + L G ++ E
Sbjct: 408 VVQKSAELEQLAIIDAFPHTENIFPLRASSDAKEDTRMLVSSHMDTKFVNLEGEDL-SVE 466
Query: 259 MGGFTSDQQTFYCGN------VDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVV 312
F + + T N V+ VLQ+T +L++T + S E P G I +
Sbjct: 467 ESPFVTREPTLAASNFVHKDQVETPYVLQITTKRVVLVNTVVDMEIHSHEYPEG--IMLA 524
Query: 313 SCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQL 371
SC++ Q L A + + Y+ + I LE+ + S L E +
Sbjct: 525 SCSRTQALLALSDGALVYIRLENDNINATKGPKLEWTLRG-QWSALCIEPADARGGPTDA 583
Query: 372 AAVGLWTDISARLLSLPSL--EEVCKEPLGGEIIPRSILMTCF---EGHCYLLVALGDGS 426
+ W D + +L + +L +++ L + S+L+ F + ++L +G+
Sbjct: 584 VVIAKW-DNTVQLRRMGALFRDDIAHATLQLASLACSVLLVDFGQGRENRHVLAGCANGT 642
Query: 427 MFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSN 486
+ + L + + LG+ P L+ V AC TV+Y + +L S
Sbjct: 643 VVAARV-TKDWNLEAPRTIGLGSLPVRLRR----DGDRVVACGSLVTVLYWDSGRLQHSA 697
Query: 487 VNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG-EAPRRIAYQES 545
+ ++ + + L+ ++ ++ + + + ++Q+LHI+T+P+G E PRRIAY
Sbjct: 698 LAVKDITNAVPLHTPAFENTTVFISPGSLLIARVKQVQRLHIKTIPMGSENPRRIAYNSH 757
Query: 546 SQTFGVIT 553
++ FGV T
Sbjct: 758 AKAFGVGT 765
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 25/208 (12%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT-YFVLGTAVVHPEENEPKQGRIIIF 1067
I++Q+TF+ L + QL E S+ S + T FV+GTA + E EP +GRI++F
Sbjct: 785 ILNQDTFDTLSSMQLDDNEEITSVASLPIMPESRTEMFVVGTAYIKDSEMEPSRGRILVF 844
Query: 1068 HYDDGKLQQ--------IAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKE- 1114
G L+ A ++ GA S+ +G ++A +N+ V L+E +E E
Sbjct: 845 ----GSLEDSGTGGSWLTAFLQVTGAVLSLTSVDGLIVAGVNTAVILYELRRNTLSEAER 900
Query: 1115 -----LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
LR + +N + L +GD I +GD + S+ +L++K + I+R + P +
Sbjct: 901 ASHLTLRQKKEWNHNYVVTSLAARGDTIYIGDSVASIAILRWK--HETLHTIARHFGPIF 958
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDS 1197
+++++ + A YNL ++S
Sbjct: 959 PLALDVMSSGSVITANIDYNLHTFHQES 986
>gi|336470789|gb|EGO58950.1| hypothetical protein NEUTE1DRAFT_145059 [Neurospora tetrasperma
FGSC 2508]
gi|350291855|gb|EGZ73050.1| hypothetical protein NEUTE2DRAFT_156600 [Neurospora tetrasperma
FGSC 2509]
Length = 1158
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 143/520 (27%), Positives = 259/520 (49%), Gaps = 54/520 (10%)
Query: 72 GSLWNGWSE----RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTY 127
S++ W+E Y L D G L +L + E + V V +G+ + LTY
Sbjct: 286 ASIFVAWAEYDPTHYFLSDDYGNLHLLTILTEGAV-----VTGMDVSNIGKTARAHVLTY 340
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ------ 181
L + ++FVGS G+SQL +LN ++ + +++ N+ PI D V+D+ +
Sbjct: 341 LGDDMLFVGSHYGNSQLYRLNLLSEDLSEILQLVQVLENIGPITDFTVMDMGNRENDSQL 400
Query: 182 ------GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWAL-SIGSPKNLD 233
GQ ++VT SG FK+G+LR +R+G+G+++ A + +L + +++L S SP+
Sbjct: 401 GNEYSSGQARIVTASGVFKDGTLRSVRSGVGLQDIAILGELQHTRALFSLQSYNSPRV-- 458
Query: 234 NTLVLSFVGHTRVLTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
+TLV SF+ TR+ E+EE + G QT N+D +LQVT +AA L+
Sbjct: 459 DTLVASFLTDTRIFKFDPHGEIEEVDNYYGMDLQHQTLLATNLDNGQLLQVTTAAATLLD 518
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCAT-GCDVYYLEVHGS-EIKQLAHRALEYEV 349
ES ++SW P + I S NK+ +L + G + + + + Q + + ++
Sbjct: 519 AESGVTIASWAPEGDRQIINASANKHWLLLSVQGTTLVSINIDNDLTVVQEKDISEQDQI 578
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEI----IPR 405
AC+ ++P + + VG WT + ++ + +LE + E L IPR
Sbjct: 579 ACIHVAP----------QLSDVGVVGFWTSGTVSIIDMSTLEPIHGESLRRSADDASIPR 628
Query: 406 SILMTCFEGHC---YLLVALGDGSMFYFSLDPA---SGRLTDKKKVTLGTQPTVLKTF-R 458
+++ + L +A+ DG++ F++ SGR K V LGT+ +
Sbjct: 629 DLVLAKVLPNAPGMTLFIAMEDGNVVTFNIGEDLTFSGR----KSVILGTREARFHLLPQ 684
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFG 518
++FA ++ P++IY S ++++S V +C ++E++P ++ L+T++
Sbjct: 685 QDGIYSIFATTEHPSLIYGSEGRIIYSAVTAEDATCVCPFDSEAFPGAVILSTENEIRIS 744
Query: 519 TIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDI 558
ID ++ H+R++ LGE RRIAY S + FG+ R ++
Sbjct: 745 EIDTARQTHVRSLELGEMVRRIAYSPSEKGFGLGCIRREV 784
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 30/198 (15%)
Query: 1038 GEDPNTY------FVLGTAVVHPEEN---EPKQGRIIIFHYDDGKLQQIAEK-EIKGACY 1087
E P++Y F++GT+ + + K+GRI++F D + + K E+KG C
Sbjct: 827 AELPDSYGNLVERFIVGTSFLEDPDRGAGTDKRGRILVFGIDSNRDPYLVLKHELKGGCR 886
Query: 1088 SMCEFNGKLLASINSTVRL--FEWTNEKELRL------ECSHFNNIIALFLKVKGDFILV 1139
++ K++A+++ TV + +E T+ E L C+ + IA V G+ I V
Sbjct: 887 ALAVMGSKIVAALHKTVVISQYEETSSTEAHLVKLASYRCTTYPVDIA----VHGNIIAV 942
Query: 1140 GDLMRSLTLLQY--------KTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
D+M+S TL++Y K+ E +R + W T++ ++ E +L A+ + NL
Sbjct: 943 ADMMKSATLVEYVPAKTGGEKSEAPKLVECARHRHSAWATAVAHVEGESWLEADANGNLI 1002
Query: 1192 ICQKDSAATSDEDRTHLQ 1209
+ Q+++ + ED+ L+
Sbjct: 1003 VLQRNAEGVTVEDQRQLR 1020
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 131/295 (44%), Gaps = 41/295 (13%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+L++AK NRIEI + L + + G I +++ + DLLF+ T ++
Sbjct: 28 SLIIAKTNRIEIWKLADGHLFMIHSKVINGTITILQKLQPKDHPTDLLFVGTDQFEYFTA 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
E + L+ L + + +R + S++ I+DP R + + L+ G+ + L N
Sbjct: 88 EWDRETQQLKTLNR-FSDPGERHMRDSQSQNKCIVDPSGRFMAMHLWEGVLSVWRL--GN 144
Query: 810 FELKASS------IRMEELEIQDVQFLHGCQN-PTIICIHQ---DVNGRHVKTHEISLKE 859
+ A++ +R+ EL I+ FL+ P + +++ + N + T+ ++ +
Sbjct: 145 RKNTATTLDILVQVRLSELFIKGSTFLYTETGIPKVAFLYRNQANSNETKLATYRLTSDD 204
Query: 860 K-----EFTKTPWKQDNIEME---ASLVIPVPE------------------PLGGAIIIG 893
+ +F T ++ + ++E A ++IPV + +GG I++G
Sbjct: 205 RHTEISKFDPTRDREIDADVEDPGAGILIPVKKVEEEVKRHHFRNTEQAKPHVGGLIVVG 264
Query: 894 QESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKE 948
+ +LY + V + ++S V +A+ D Y L D G L +L + E
Sbjct: 265 ETRLLYIDEVTKTQVESALREASIFVAWAEYDPT--HYFLSDDYGNLHLLTILTE 317
>gi|85107301|ref|XP_962347.1| hypothetical protein NCU06605 [Neurospora crassa OR74A]
gi|28923951|gb|EAA33111.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1158
Score = 192 bits (489), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 259/519 (49%), Gaps = 54/519 (10%)
Query: 73 SLWNGWSE----RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYL 128
S++ W+E Y L D G L +L + E + V V +G+ + LTYL
Sbjct: 287 SIFVAWAEYDPTHYFLSDDYGNLHLLTILTEGAV-----VTGMDVSNIGKTARAHVLTYL 341
Query: 129 DNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ------- 181
+ ++FVGS G+SQL +LN ++ + +++ N+ P+ D V+D+ +
Sbjct: 342 GDDMLFVGSHYGNSQLYRLNLLSEDLSEILQLVQVLENIGPVTDFTVMDMGNRENDSQLG 401
Query: 182 -----GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWAL-SIGSPKNLDN 234
GQ ++VT SG FK+G+LR +R+G+G+++ A + +L + +++L S SP+ +
Sbjct: 402 NEYSSGQARIVTASGVFKDGTLRSVRSGVGLQDIAILGELQHTRALFSLQSYNSPRV--D 459
Query: 235 TLVLSFVGHTRVLTLS-GAEVEETE-MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
TLV SF+ TR+ E+EE + G QT N+D +LQVT +AA L+
Sbjct: 460 TLVASFLTDTRIFKFDPHGEIEEVDNYYGMDLQHQTLLATNLDNGQLLQVTTAAATLLDA 519
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQVLCAT-GCDVYYLEVHGS-EIKQLAHRALEYEVA 350
ES ++SW P + I S NK+ +L + G + + + + Q + + ++A
Sbjct: 520 ESGVTIASWAPEGDRQIINASANKHWLLLSVQGTTLVSINIDNDLTVVQEKDISEQDQIA 579
Query: 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEI----IPRS 406
C+ ++P + + VG WT + ++ + +LE + E L IPR
Sbjct: 580 CIHVAP----------QLSDVGVVGFWTSGTVSIIDMSTLEPIHGESLRRSADDASIPRD 629
Query: 407 ILMTCFEGHC---YLLVALGDGSMFYFSLDPA---SGRLTDKKKVTLGTQPTVLKTF-RS 459
+++ + L +A+ DG++ F++ SGR K V LGT+ +
Sbjct: 630 LVLAKVLPNAPGMTLFIAMEDGNVVTFNIGEDLTFSGR----KSVILGTREARFHLLPQQ 685
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
++FA ++ P++IY S ++++S V +C ++E++P ++ L+T++
Sbjct: 686 DGIYSIFATTEHPSLIYGSEGRIIYSAVTAEDATCVCPFDSEAFPGAVILSTENEIRISE 745
Query: 520 IDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDI 558
ID ++ H+R++ LGE RRIAY S + FG+ R ++
Sbjct: 746 IDTARQTHVRSLELGEMVRRIAYSPSEKGFGLGCIRREV 784
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 30/198 (15%)
Query: 1038 GEDPNTY------FVLGTAVVHPEEN---EPKQGRIIIFHYDDGKLQQIAEK-EIKGACY 1087
E P++Y F++GT+ + + K+GRI++F D + + K E+KG C
Sbjct: 827 AELPDSYGNLVERFIVGTSFLEDPDRGAGTDKRGRILVFGIDSNRDPYLVLKHELKGGCR 886
Query: 1088 SMCEFNGKLLASINSTVRL--FEWTNEKELRL------ECSHFNNIIALFLKVKGDFILV 1139
++ K++A+++ TV + +E T+ E L C+ + IA V G+ I V
Sbjct: 887 ALAVMGSKIVAALHKTVVISQYEETSSTEAHLVKLASYRCTTYPVDIA----VHGNMIAV 942
Query: 1140 GDLMRSLTLLQY--------KTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
D+M+S TL++Y K+ E +R + W T++ ++ E +L A+ + NL
Sbjct: 943 ADMMKSATLVEYVPAKTGGEKSEAPKLVECARHRHSAWATAVAHVEGESWLEADANGNLI 1002
Query: 1192 ICQKDSAATSDEDRTHLQ 1209
+ Q+++ + ED+ L+
Sbjct: 1003 VLQRNAEGVTVEDQRQLR 1020
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 130/295 (44%), Gaps = 41/295 (13%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+L++AK NRIEI + L + + G I +++ + DLLF+ T ++
Sbjct: 28 SLIIAKTNRIEIWKLADGHLSMIHSKVINGTITILQKLQPKDHPTDLLFVGTDQFEYFTA 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN 809
E + L+ L + + +R + S++ I+DP R + + L+ G+ + L N
Sbjct: 88 EWDRETQQLKTLNR-FSDPGERHMRDSQSQNKCIVDPSGRFMAMHLWEGVLSVWRL--GN 144
Query: 810 FELKASS------IRMEELEIQDVQFLHGCQN-PTIICIHQ---DVNGRHVKTHEISLKE 859
+ A++ +R+ EL I+ FL+ P + +++ + N + T+ ++ +
Sbjct: 145 RKNTATTLDILVQVRLSELFIKGSTFLYTETGIPKVAFLYRNQANSNETKLATYRLTSDD 204
Query: 860 K-----EFTKTPWKQDNIEME---ASLVIPVPE------------------PLGGAIIIG 893
+ +F T ++ + ++E A ++IPV + +GG I++G
Sbjct: 205 RHTEISKFDPTRDREIDADVEDPGAGILIPVKKVEEEVKRHHFRNTEQAKPHVGGLIVVG 264
Query: 894 QESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKE 948
+ +LY + V + + S V +A+ D Y L D G L +L + E
Sbjct: 265 ETRLLYIDEVTKTQVESALREPSIFVAWAEYDPT--HYFLSDDYGNLHLLTILTE 317
>gi|336263557|ref|XP_003346558.1| hypothetical protein SMAC_04731 [Sordaria macrospora k-hell]
gi|380090453|emb|CCC11749.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1149
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 252/511 (49%), Gaps = 52/511 (10%)
Query: 73 SLWNGWSE----RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYL 128
S++ W+E Y L D G L +L + E + V V +G + LTYL
Sbjct: 268 SIFVAWAEYDPTHYFLADDYGNLHLLTILTEGAV-----VTGMDVSNIGRTARAHVLTYL 322
Query: 129 DNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ------- 181
+ ++FVGS G+SQL +LN ++ + +++ N+ PI D ++D+ +
Sbjct: 323 GDDMLFVGSHYGNSQLYRLNLLNEDLNEILQLVQVLENIGPITDFTIMDMGNRENDSQLG 382
Query: 182 -----GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNT 235
GQ ++VT SG FK+G+LR +R+G+G+++ A + +L + +++L + D T
Sbjct: 383 NEYSSGQARIVTASGIFKDGTLRSVRSGVGLQDIAILGELQHTRALFSLQSYNSSRAD-T 441
Query: 236 LVLSFVGHTRVLTLS-GAEVEE-TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
LV SF+ TR+ E+EE + G QT N+D +LQVT +AA L+ E
Sbjct: 442 LVASFLTDTRIFRFDPHGEIEEVADYCGMDLQHQTLLTTNLDNGQLLQVTTAAATLLDAE 501
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCAT-GCDVYYLEVHGS-EIKQLAHRALEYEVAC 351
S ++SW P + I S NK+ +L + G + + + + Q + + ++AC
Sbjct: 502 SGVTIASWAPEGDRQIINASANKHWLLLSVQGTTLVSINIDNDLTVVQEKDVSEQDQIAC 561
Query: 352 LDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEI----IPRSI 407
+ ++P + + VG WT + ++ + +LE + E L IPR I
Sbjct: 562 IHVAP----------QLSDVGVVGFWTSGTVSIIDMSTLEPIHGESLRRSADDASIPRDI 611
Query: 408 LMTCFEGHC---YLLVALGDGSMFYFSLDPA---SGRLTDKKKVTLGTQPTVLKTF-RSL 460
++ + L +A+ DG++ F++ SGR K V LGT+ +
Sbjct: 612 VLAKVLPNTPGMTLFIAMEDGNVVTFNIGEDLTFSGR----KSVILGTREARFHLLPQQD 667
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTI 520
++FA ++ P++IY S ++++S V +C ++E++P ++ L+T++ I
Sbjct: 668 GIYSIFATTEHPSLIYGSEGRIIYSAVTAEDATCVCPFDSEAFPGAVVLSTETEIKISEI 727
Query: 521 DEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
D ++ H+R++ LGE RRIAY S + FG+
Sbjct: 728 DTARRTHVRSLELGEMVRRIAYSPSEKGFGL 758
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 22/194 (11%)
Query: 1038 GEDPNTY------FVLGTAVVHPEEN---EPKQGRIIIFHYDDGKLQQIAEK-EIKGACY 1087
E P++Y F++GT+ + + K+GRI++F D + + K E++GAC
Sbjct: 808 AELPDSYGNLLERFIVGTSFLEDPDRGAGTDKRGRILVFGIDSNRDPYLVLKHELRGACR 867
Query: 1088 SMCEFNGKLLASINSTVRL--FEWTNEKELRLE--CSHFNNIIALFLKVKGDFILVGDLM 1143
++ K++A+++ TV + +E T+ E RL S+ + + V G+ I V D+M
Sbjct: 868 ALAVMGSKIVAALHKTVVISQYEETSSTEARLVKLASYRCTTYPIDIAVHGNIIAVADMM 927
Query: 1144 RSLTLLQY---KTMEGSFE-----EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQK 1195
+S TL++Y KT E +E E +R + W T++ ++ E +L A+ + NL + Q+
Sbjct: 928 KSATLVEYVQAKTEEEKYEPAKLVECARHRHSAWATAVAHVEGESWLEADANGNLVVLQR 987
Query: 1196 DSAATSDEDRTHLQ 1209
+ + ED+ L+
Sbjct: 988 NVEGVTAEDQRQLR 1001
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 113/288 (39%), Gaps = 46/288 (15%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+L++AK NRIEI + L + + G I +++ + DLLF+ T ++
Sbjct: 28 SLIIAKTNRIEIWKLADGHLSMIHSKVINGTITILQKLQPKDHPTDLLFVGTDQFEYFTA 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI------- 802
E + L+ L + + +R + S++ I+DP R + + L+ G+ +
Sbjct: 88 EWDHETQQLKTLNR-FSDPGERHMRDSQSQDKCIVDPSGRFMAMHLWEGVLSVWRLGNRK 146
Query: 803 ---------IPLEKDNFELKASSIRMEELEIQDVQFLHGCQ---NPTIICIHQDVNGR-- 848
+ + +K S+ E I V FL+ Q N T + ++++
Sbjct: 147 STATTLDILVQVRLSELFIKGSTFLYTETGIPKVAFLYRNQANSNETKLATDREIDADVE 206
Query: 849 --------HVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYH 900
VK E +K F T + ++ GG I+IG+ +LY
Sbjct: 207 DPGAGILIPVKKVEEEVKRHHFRNTEQAKPHV--------------GGLIVIGETRLLYI 252
Query: 901 SGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKE 948
+ V + + S V +A+ D Y L D G L +L + E
Sbjct: 253 DEVTKTQVESALKEPSIFVAWAEYDPT--HYFLADDYGNLHLLTILTE 298
>gi|408393339|gb|EKJ72604.1| hypothetical protein FPSE_07241 [Fusarium pseudograminearum CS3096]
Length = 1161
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 248/524 (47%), Gaps = 74/524 (14%)
Query: 77 GWSE----RYLLGDLAGRLFMLLLEKEEKMDGTFSV----------KEPKVELLGEISIP 122
W+E RYLL D GRL +L + + G K P + S
Sbjct: 290 AWAEYDSTRYLLADDYGRLDLLTIRTNLEPTGVVVTGMTLEPFEFDKSPAI-----TSRA 344
Query: 123 ECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ- 181
L YL +G +FV S GDSQL ++N + V +++SF+N API+D ++D+ +
Sbjct: 345 SSLVYLGDGNLFVASHHGDSQLYQINI----DTKAVMLVQSFSNNAPILDFSIMDMGNRE 400
Query: 182 -----------GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSP 229
GQ ++V G +++G+LR IR+G+G+E+ +D L G +G++ L
Sbjct: 401 GDTQSGNVFSSGQSRIVAGCGAYRDGTLRSIRSGVGLEDRGVLDELEGTRGLFTLHSYGS 460
Query: 230 KNLDNTLVLSFVGHTRVLT--LSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAA 287
K +D TLV+S + TR+L+ L G E G + D +T N+ +LQ+TP +
Sbjct: 461 KMVD-TLVVSSITETRILSFDLEGGIEEIYSFQGMSLDSETLLASNLPSGQLLQITPKSV 519
Query: 288 ILISTESKARVSSWEPPNGKSISVVSCN-KNQVLCATGCDVYYLEVHGSEIKQLAHRALE 346
+L+ E +S W+ P+GK+I+ S N K +L G + L + ++ LA A +
Sbjct: 520 VLLDPEGGTTISKWDVPDGKTITRASANSKWALLSVDGTSLVSLNL----LQNLAVNAQQ 575
Query: 347 YEVACLDISPLSNEETSSEPAK----------AQLAAVGLWTDISARLLSLPSLE----E 392
N +++S+P + L G W+ L+ + SL+ E
Sbjct: 576 I-----------NNDSTSQPDQISCIHAARDPPDLGVAGWWSSGQISLIDMASLKPLHGE 624
Query: 393 VCKEPLGGEIIPRSILMTCFE----GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLG 448
++ +PR + + LLVA+ DG++ F++ ++ +K VTLG
Sbjct: 625 SMRQTEDSATVPRDVALVQLHPPNISGPTLLVAMEDGNVVTFNVSTKGFSVSGRKSVTLG 684
Query: 449 TQPTVLKTF-RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSL 507
+ P L + T+NVF ++ ++IYSS +++FS + ++ ++PDS+
Sbjct: 685 SNPARLHILPQEDGTSNVFVTTEHASLIYSSEGRIIFSATTADDATFVAPFSSHAFPDSV 744
Query: 508 ALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
L+TD +D + H++ +P+ E RR+AY + FG+
Sbjct: 745 VLSTDQHIRICHVDRERLTHVKALPVNETVRRVAYSPGLKAFGL 788
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 142/289 (49%), Gaps = 36/289 (12%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+L+VAK NR+EI +T EGL + ++G I++++ R + DLLFI T R L
Sbjct: 28 DLIVAKANRLEIWRLTEEGLLCQQTKLIHGTISMLQRLRPKGSETDLLFIGTDRLQYFNL 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI--IPLEK 807
LE + + ++S+ + S++ ++DP R + + L+ G+ + +P K
Sbjct: 88 IWNDATKQLETIERVIEDLSEPYMRQSQSQNKCLVDPTGRFLAMHLWEGVLNVFKLPTRK 147
Query: 808 ---DNFELKASSIRMEELEIQDVQFLHGCQN-PTIICIHQ---DVNGRHVKTHEISLKEK 860
+ E+ +R+ EL ++ F + N PTI +++ D + + ++ +K
Sbjct: 148 GSTNKLEV-LDQVRLTELFMKASTFTYSYTNHPTIAFLYKTQMDQEETRLVIYRLTHDDK 206
Query: 861 EFTKT---PWKQDNIEME-----ASLVIPVP---------------EP-LGGAIIIGQES 896
T + P K +++E AS++IPVP +P LGG +++G+
Sbjct: 207 GNTVSKFDPHKDRELDIEIPDPYASMLIPVPLDEEKRYHVRNNQGAKPHLGGLVVVGETL 266
Query: 897 ILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLL 945
+ Y+ G+++ +V+ + V +A+ D+ RYLL D GRL +L +
Sbjct: 267 LTYYDGQTHRSVSAGLKDPRIFVAWAEYDST--RYLLADDYGRLDLLTI 313
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 118/244 (48%), Gaps = 24/244 (9%)
Query: 985 GSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLIS-------SKF 1037
GS K+ N N EV + ++D+ F+ L + G +L L+
Sbjct: 789 GSIKRELVN-----NEEVVTSSFRLVDEIVFKELGSPFALNGSSSLELVECVIRAELPDV 843
Query: 1038 GEDPNTYFVLGTAVVHP---EENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFN 1093
G +P F++GT+ + E+ GRI++ D + ++ QI +KG C +
Sbjct: 844 GGNPTERFIVGTSFISDGGVEDPNGTLGRILVLGVDANRQVYQIVSHNLKGPCRCLGMIE 903
Query: 1094 GKLLASINSTVRLFEWTNEKE----LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLL 1149
++A ++ TV ++ ++ E L+ ++ I + + V G+ I VGDLM+SL+L+
Sbjct: 904 DNIVAGLSKTVVVYSFSQETSSSGSLQKLAAYRPAAIPIDIDVSGNMIGVGDLMQSLSLV 963
Query: 1150 QYKTME----GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDR 1205
++ + +E +R + W T++ ++ E +L A++ NL + Q++ A +++DR
Sbjct: 964 EFIPAQDGNKAQLQERARHFESLWTTAVCHIEGERWLEADSRGNLVVLQRNVDAPTEQDR 1023
Query: 1206 THLQ 1209
L+
Sbjct: 1024 RRLE 1027
Score = 40.8 bits (94), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
+G+LR IR+G+G+E+ +D L G +G++ L K +D TLV+S + TR+L+
Sbjct: 425 DGTLRSIRSGVGLEDRGVLDELEGTRGLFTLHSYGSKMVD-TLVVSSITETRILSF 479
>gi|331247470|ref|XP_003336363.1| DNA damage-binding protein 1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 962
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 261/525 (49%), Gaps = 64/525 (12%)
Query: 76 NGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELL--GEISIPECLTYLDNGVV 133
+G +LLGDL G L L L+ + GT P + G + PE L Y+ +G V
Sbjct: 8 DGVPNCWLLGDLYGNLIFLFLK--QSTTGT----PPSLHYFHAGHVPSPEALVYITSGFV 61
Query: 134 FVGSRLGDSQLVKL-----NRSPDENGT-YVSVMESFTNLAPIIDMVVVDLERQGQGQLV 187
F+ S GDSQL+KL + +PD + V+ +F NLAPI D V + + Q+V
Sbjct: 62 FLASHYGDSQLLKLPSPTSSLNPDNTASAQPEVITTFPNLAPISDFCVTEDRKSLVNQIV 121
Query: 188 TCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALS----IGSPKNLDNTLVLSFVGH 243
TCSG ++GSLR+I++GIGI E +++ G++ +WAL + S ++ D+ LVLS
Sbjct: 122 TCSGSHRDGSLRVIKHGIGIRESGSLEVGGVQRLWALRSSTHVNSVEDFDDRLVLSCADC 181
Query: 244 TRVLTLS-GAEVEETEM-GGFTSDQQTFYCGNV----DPRTVLQVTPSAAILISTESKAR 297
TR L L+ +EE + GF SD T GN+ D T + ++ +I+ ++
Sbjct: 182 TRFLALNEDGTIEEIGLFNGFESDVPTILAGNLLDGSDSTTRYSIQVTSRKIIAGDALV- 240
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLE-------VHGSEIKQLAHRALEYEVA 350
WEP + KSI+ L T C V E G +++ ++ L
Sbjct: 241 ---WEPDDAKSIT------RAALSVTTCAVSLKEQVVVLCIKDGKFVEKGTYKLLN---- 287
Query: 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMT 410
DIS L+ +++ + A AQ W ++S+ S +C+ + + S+ MT
Sbjct: 288 --DISSLAIDQSENFVAAAQ------WVTNCIEIISVSSSSTICRVNTDSDFMVNSLKMT 339
Query: 411 CFEG----HCYLLVALGDGSMFYFSLDPASGRL--TDKKKVTLGTQPTVLKTFRSLSTTN 464
FEG C LL+ LGDG + +L P + + TLG +P + R+ +
Sbjct: 340 NFEGTESDGCRLLIGLGDGKIMNVALGPTGMHVEGDSPRFTTLGIRPIEFVSMRNATGEF 399
Query: 465 VFACSDRPTVI--YSSNHKLVFSNVNLR--QVNHMCSLNAESYPDSLALATDSTFTFGTI 520
++A SD+PT+I +N + ++ V ++ V+ L+A + DSL LA++ G +
Sbjct: 400 LWANSDQPTIIDRIQNNGRFAYTPVTVQGGSVSSATGLHARFFQDSLVLASNDEIRIGKL 459
Query: 521 DEIQKLHIRTVPLG-EAPRRIAYQESSQTFGVITTRIDIQEADGS 564
+ +K++I + LG E PRRIA+ E + +GV+ R+++ + G+
Sbjct: 460 NTTEKMNILKISLGNEQPRRIAHSEDMKAYGVVCARLELDQDTGT 504
Score = 48.5 bits (114), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALS----IGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR+I++GIGI E +++ G++ +WAL + S ++ D+ LVLS TR L L+
Sbjct: 129 DGSLRVIKHGIGIRESGSLEVGGVQRLWALRSSTHVNSVEDFDDRLVLSCADCTRFLALN 188
Query: 57 --GAEWGFHLLRGFSS 70
G L GF S
Sbjct: 189 EDGTIEEIGLFNGFES 204
>gi|302894051|ref|XP_003045906.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256726833|gb|EEU40193.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1162
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 245/528 (46%), Gaps = 81/528 (15%)
Query: 77 GWSE----RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVEL-LGE----ISIPECLTY 127
W+E Y L D GRL ML +E + G V + LGE S L Y
Sbjct: 290 AWAEYDGTHYFLADDYGRLDMLTIETNVEATGVVVTGMTLVPMKLGESPALTSRASSLVY 349
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ------ 181
+ N +FV S GDSQL +++ P+ N + ++S +N API+D ++D+ +
Sbjct: 350 MGNNTLFVASHHGDSQLYQID--PETNAMLL--IKSLSNNAPILDFSIMDMGNREGDAQA 405
Query: 182 ------GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDN 234
GQ ++V G +++GSLR IR+G+G+EE +D L G +G++ L +L +
Sbjct: 406 GNAFSSGQSRIVAGCGAYQDGSLRSIRSGVGLEERGILDELDGTRGLFTLR-SYNSDLVD 464
Query: 235 TLVLSFVGHTRVLTLS--GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
TLV+S + TR+L+ G E G D +T N+ +LQ+TP + +L+
Sbjct: 465 TLVVSSITETRILSFDTDGGIEEIYSFQGMEQDTETLLASNLPNGQLLQITPKSVVLLDP 524
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACL 352
ES VS W+ P GKSI+ S N L L V G+ + L L
Sbjct: 525 ESGVAVSRWDVPTGKSITRASANTKWAL---------LSVDGTSLVSLN---------LL 566
Query: 353 DISPLSNEETSSEPAKAQ---------------LAAVGLWTDISARLLSLPSLEEVCKEP 397
++ ++T +EP Q + VG W+ L+ + + + P
Sbjct: 567 QNLAVNVQQTQAEPGSQQPDQISCIHAARDPPDIGVVGWWSSGRISLIDMATFQ-----P 621
Query: 398 LGGE---------IIPRSILMTCFE----GHCYLLVALGDGSMFYFSLDPASGRLTDKKK 444
L GE +PR I + LLVA+ DG++ F++ ++ +K
Sbjct: 622 LHGESMRQTDDSATVPRDIALVQLHPPEISGPTLLVAMEDGTVVTFNVSIKGFAVSGRKS 681
Query: 445 VTLGTQPTVLKTF-RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESY 503
VTLG+ P L + T++VF ++ ++IYSS +++FS + ++ ++
Sbjct: 682 VTLGSNPARLHVLPQDDGTSSVFVTTEHASLIYSSEGRIIFSATTADDATFVAPFDSHAF 741
Query: 504 PDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
PDS+ L+TDS +D+ + H++ +P+ E RR+AY + FG+
Sbjct: 742 PDSIVLSTDSHIRICHVDKERLTHVKALPVHETVRRVAYSPGLKAFGL 789
Score = 90.1 bits (222), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 164/362 (45%), Gaps = 51/362 (14%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+LVVAK NR+EI ++ EG+ ++ ++G I++++ R + DLLFI T R L
Sbjct: 28 DLVVAKANRLEIWRLSEEGMECLQTKLIHGTISMLQRLRPKGSETDLLFIGTDRLQYFNL 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI--IPLEK 807
++ L+ + + ++S+ + S++ ++DP AR + + L+ G+ + +P K
Sbjct: 88 AWNPEMKQLDTIERVIEDLSEPYMRHSQSQNKCLVDPTARFLAMHLWEGVLNVFRLPTRK 147
Query: 808 ---DNFELKASSIRMEELEIQDVQFLHG-CQNPTIICIHQDVNGRHVKTHEISLKEKEFT 863
+ E+ +R+ EL ++ F+H +PTI +++ ++ E L T
Sbjct: 148 GSTNKLEI-LDQVRLTELFMKASTFIHSRTGHPTIAFLYKS----QMEQEEARLAIYRLT 202
Query: 864 K----------TPWKQDNIEM-----EASLVIPVP----------------EPLGGAIII 892
P K +++ AS++IPVP LGG +I+
Sbjct: 203 HDDKGGVVSKFDPHKDRELDVVIPDPYASMLIPVPLDEEKRYHVRNTEGAKAHLGGLLIV 262
Query: 893 GQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMD 952
G+ + Y+ G ++ +V+ + V +A+ D G Y L D GRL ML +E +
Sbjct: 263 GETLLTYYDGLTHRSVSSSLKDPRIFVAWAEYD--GTHYFLADDYGRLDMLTIETNVEAT 320
Query: 953 GTFSVKEPKVEL-LGEHCKGPVVEMSSLSYIKPGSTKQSTANQPAD---FNMEVEVHNLL 1008
G V + LGE P + + S + G+ A+ D + ++ E + +L
Sbjct: 321 GVVVTGMTLVPMKLGE---SPALTSRASSLVYMGNNTLFVASHHGDSQLYQIDPETNAML 377
Query: 1009 II 1010
+I
Sbjct: 378 LI 379
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 115/231 (49%), Gaps = 19/231 (8%)
Query: 998 FNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLIS-------SKFGEDPNTYFVLGTA 1050
N EV + ++D+ F+ L L L ++ G + F++GT+
Sbjct: 798 LNEEVVTSSFRLVDEIVFKELGEPFLLNASSTLEIVECVIRAELPDAGGNLTERFIVGTS 857
Query: 1051 VVHP---EENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRL 1106
++ +E GRI++ D+ + + QI +KG C + + ++A ++ TV +
Sbjct: 858 FINDGQVQEANGTLGRILVLGVDEHRQVYQIVSHNLKGPCRCLGMMDDYIVAGLSKTVVV 917
Query: 1107 FEWTNEKE----LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY----KTMEGSF 1158
+ ++ + L ++ + + L + G+ I VGDLM+SL+L+++ +
Sbjct: 918 YNYSQDTSSSGSLEKLAAYRPAALPVDLDISGNMIGVGDLMQSLSLVEFIPAQDGRKAKL 977
Query: 1159 EEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
EE +R Y P W TS+ LD+E +L A++ NL + Q+++ A +++DR+ L+
Sbjct: 978 EERARHYEPIWTTSLCHLDEERWLEADSQGNLIVLQRNADAPTEQDRSRLE 1028
Score = 43.1 bits (100), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 633 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 686
+LVVAK NR+EI ++ EG+ ++ ++G I++++ R + DLLFI T R
Sbjct: 28 DLVVAKANRLEIWRLSEEGMECLQTKLIHGTISMLQRLRPKGSETDLLFIGTDR 81
Score = 41.6 bits (96), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
+GSLR IR+G+G+EE +D L G +G++ L +L +TLV+S + TR+L+
Sbjct: 425 DGSLRSIRSGVGLEERGILDELDGTRGLFTLR-SYNSDLVDTLVVSSITETRILSF 479
>gi|46121747|ref|XP_385428.1| hypothetical protein FG05252.1 [Gibberella zeae PH-1]
Length = 1161
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 146/521 (28%), Positives = 251/521 (48%), Gaps = 68/521 (13%)
Query: 77 GWSE----RYLLGDLAGRLFMLLLEKEEKMDG---TFSVKEPKVELLGEISI---PECLT 126
W+E RYLL D GRL +L + + G T EP E +I L
Sbjct: 290 AWAEYDSTRYLLADDYGRLDLLTIRTNLEPTGVVVTGMTVEP-FEFDNSPAITSRASSLV 348
Query: 127 YLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ----- 181
YL NG +FV S GDSQL ++N + +++SF+N API+D ++D+ +
Sbjct: 349 YLGNGNLFVASHHGDSQLYQINI----DTKAAMLVQSFSNNAPILDFSIMDMGNREGDTQ 404
Query: 182 -------GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWAL-SIGSPKNL 232
GQ ++V G +++G+LR IR+G+G+E+ +D L G +G++ L S GS +
Sbjct: 405 SGNVFSSGQSRIVAGCGAYRDGTLRSIRSGVGLEDRGVLDELEGTRGLFTLHSYGS--EM 462
Query: 233 DNTLVLSFVGHTRVLTLS--GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILI 290
+TLV+S + TR+L+ G E G + D +T N+ +LQ+TP + +L+
Sbjct: 463 VDTLVVSSITETRILSFDFEGGIEEIYSFQGMSLDSETLLASNLPSGQLLQITPKSVVLL 522
Query: 291 STESKARVSSWEPPNGKSISVVSCN-KNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEV 349
E +S W+ P+GK+I+ S N K +L G + L + ++ LA A +
Sbjct: 523 DPEGGTTISKWDVPDGKTITRASANSKWALLSVDGTSLVSLNL----LQNLAVNAQQI-- 576
Query: 350 ACLDISPLSNEETSSEPAK----------AQLAAVGLWTDISARLLSLPSLE----EVCK 395
N +++S+P + L VG W+ L+ + SL+ E +
Sbjct: 577 ---------NNDSTSQPDQISCIHAARDSPDLGVVGWWSSGQISLIDMASLKPLHGESMR 627
Query: 396 EPLGGEIIPRSILMTCFE----GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQP 451
+ +PR + + LLVA+ DG++ F++ ++ +K VTLG+ P
Sbjct: 628 QTEDSATVPRDVALVQLHPPDISGPTLLVAMEDGNIVTFNVSTKGFSVSGRKSVTLGSNP 687
Query: 452 TVLKTF-RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALA 510
L + T+NVF ++ ++IYSS +++FS + ++ ++PDS+ L+
Sbjct: 688 ARLHILPQEDGTSNVFVTTEHASLIYSSEGRIIFSATTADDATFVAPFSSHAFPDSVVLS 747
Query: 511 TDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
TD +D + H++ +P+ E RR+AY + FG+
Sbjct: 748 TDQHIRICHVDRERLTHVKALPVNETVRRVAYSPGLKAFGL 788
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 142/289 (49%), Gaps = 36/289 (12%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+L+VAK NR+EI +T EGL + ++G I++++ R + DLLFI T R L
Sbjct: 28 DLIVAKANRLEIWRLTEEGLVCQQTKLIHGTISMLQRLRPKGSETDLLFIGTDRLQYFNL 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI--IPLEK 807
LE + + ++S+ + S++ ++DP R + + L+ G+ + +P K
Sbjct: 88 IWNDATKQLETIERVIEDLSEPYMRQSQSQNKCLVDPTGRFLAMHLWEGVLNVFKLPTRK 147
Query: 808 ---DNFELKASSIRMEELEIQDVQFLHGCQN-PTIICIHQ---DVNGRHVKTHEISLKEK 860
+ E+ +R+ EL ++ F + N PTI +++ D + + ++ +K
Sbjct: 148 GSTNKLEV-LDQVRLTELFMKASTFTYSYTNHPTIAFLYKTQMDQEETRLVIYRLTHDDK 206
Query: 861 EFTKT---PWKQDNIEME-----ASLVIPVP---------------EP-LGGAIIIGQES 896
T + P K +++E AS++IPVP +P LGG +++G+
Sbjct: 207 GNTVSKFDPHKDRELDIEIPDPYASMLIPVPLDEEKRYNVRNNQGAKPHLGGLVVVGETL 266
Query: 897 ILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLL 945
+ Y+ G+++ +V+ + V +A+ D+ RYLL D GRL +L +
Sbjct: 267 LTYYDGQTHRSVSAGLKDPRIFVAWAEYDST--RYLLADDYGRLDLLTI 313
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 117/244 (47%), Gaps = 24/244 (9%)
Query: 985 GSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLIS-------SKF 1037
GS K+ N N EV + ++D+ F+ L + G L L+
Sbjct: 789 GSIKRELVN-----NEEVVTSSFRLVDEIVFKELGSPFPLNGSSTLELVECVIRAELPDV 843
Query: 1038 GEDPNTYFVLGTAVVHP---EENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFN 1093
G +P F++GT+ + E+ GRI++ D + ++ QI +KG C +
Sbjct: 844 GGNPTERFIVGTSFISDGGVEDPNGTLGRILVLGVDANRQVYQIVSHNLKGPCRCLGMIE 903
Query: 1094 GKLLASINSTVRLFEWTNEKE----LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLL 1149
++A ++ TV ++ ++ E L+ ++ I + + V G+ I VGDLM+SL+L+
Sbjct: 904 DNIVAGLSKTVVVYSFSQETSSSGSLQKLAAYRPAAIPIDIDVSGNMIGVGDLMQSLSLV 963
Query: 1150 QYKTME----GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDR 1205
++ + +E +R + W T++ ++ E +L A++ NL + Q++ A +++DR
Sbjct: 964 EFIPAQDGNKAQLQERARHFESLWTTAVCHIEGERWLEADSRGNLVVLQRNVNAPTEQDR 1023
Query: 1206 THLQ 1209
++
Sbjct: 1024 RRME 1027
>gi|387219217|gb|AFJ69317.1| dna damage-binding protein 1a, partial [Nannochloropsis gaditana
CCMP526]
Length = 383
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/315 (38%), Positives = 184/315 (58%), Gaps = 26/315 (8%)
Query: 272 GNVDPRTVLQVTPSAAILI--STESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVY 328
GN+ ++QVT ++ L+ ++ S +S W +G I+V + N QV+ A +G +V
Sbjct: 1 GNMVGEMLVQVTDASVRLLDLASASSPLLSEWISAHGTRITVAAGNAMQVVLALSGGEVV 60
Query: 329 YLEVHGSE--IKQLAHRALEYEVACLDISPL-----SNEETSSE-----------PAKAQ 370
YLE+ ++ +++ A LE+EV+CL + PL E+ + E P A
Sbjct: 61 YLELKANQRALEEKARIHLEHEVSCLSVHPLIPGPVPGEDGAEEAMQVEDGREEAPPSAF 120
Query: 371 LAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHC-YLLVALGDGSM-- 427
L AVG WTD+S RLL+LPSL+ + + LG + RS+L+ + YLLV LGDG +
Sbjct: 121 LVAVGTWTDLSVRLLALPSLQSLHRCELGSDTQARSVLLITLQADIHYLLVGLGDGFLVS 180
Query: 428 FYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN-VFACSDRPTVIY-SSNHKLVFS 485
F +L+ + L +KKV+LGTQP L F S + VF CS+RPTVI+ S KL++S
Sbjct: 181 FAVALEGKTPALGPRKKVSLGTQPLSLTPFSSTAAEPCVFVCSERPTVIHVSKADKLLYS 240
Query: 486 NVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQES 545
NVN +V M ++ +PD LALA+++ GT+D+IQKL I+TVPLGE+PRRIA+
Sbjct: 241 NVNTSEVTLMAPFHSALFPDCLALASETGLRIGTVDDIQKLRIQTVPLGESPRRIAHIPQ 300
Query: 546 SQTFGVITTRIDIQE 560
+ V+T + + E
Sbjct: 301 AGVLAVLTAKYAVGE 315
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 991 TANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA 1050
TA N E E + + +D +FE + A +L P E A S+ + F +DP Y V+GT
Sbjct: 308 TAKYAVGENGEEETNYVRFLDDASFEAVGAFELRPMELACSVAACTFAKDPREYLVVGTC 367
Query: 1051 VVHPEENEPKQGRIII 1066
+ +E+EP++GR+I+
Sbjct: 368 MALEDEDEPREGRLIV 383
>gi|395330962|gb|EJF63344.1| hypothetical protein DICSQDRAFT_153890 [Dichomitus squalens
LYAD-421 SS1]
Length = 1263
Score = 190 bits (483), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 163/586 (27%), Positives = 255/586 (43%), Gaps = 118/586 (20%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
R LLGD GRL M+ + DG + + LGE S P CL+YL + V+++GS
Sbjct: 336 RRVLLGDAYGRLAMIAFD-----DGKMCLN---LIPLGEASSPTCLSYLSSQVLYLGSHY 387
Query: 140 GDSQLVKLNRSPDEN--------------------------------------------- 154
GDSQL++++ +P N
Sbjct: 388 GDSQLLRIHPTPFANATVDTLPIPRGVSSVPPSSLAGSGKGKAKATSGVGDAESGSAREG 447
Query: 155 ------GTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIE 208
GT++ V+++F N+API+D + D++ GQ Q++T SGG GSLR+IR +
Sbjct: 448 RVVNTQGTFLEVLQNFDNIAPIMDAALADIDGSGQPQVITSSGGRNTGSLRVIRTEADFQ 507
Query: 209 EHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEV---EETEMGGFTS 264
E A +D L G+ IW + S + + LV+S + T V G + + + GFT+
Sbjct: 508 EQARLDGLIGVTDIWPVKTHSAEPIHTHLVVSTLRETHVFAFEGKDAIAHLDPSVAGFTT 567
Query: 265 DQQTFYCGNVDPRT--------------VLQVTPSAAILISTESK----ARVS-SWEPPN 305
TF GN+ R V+Q+T L+ E +V W P
Sbjct: 568 HAPTFVLGNIPRRVVSASGTSSYEHSSLVVQITSEGIQLVEYEPTLFAFGKVGPGWYPKQ 627
Query: 306 ------GKSISVVSCNKNQ-VLCATGCDVYYLEVHGSEIKQ-LAHRALEYEVACLDISPL 357
G+ I + + +Q V+ +G + + + Q L R E+ + P
Sbjct: 628 VGGEYAGREIVAAAMSPSQFVVGLSGGRLALFNLGQKDTVQLLTTRNFPDEICAISCQPY 687
Query: 358 SNEETSSEPAKAQLAAVGLWTDISARLLSL-PS--LEEVCKEPLGGEIIPRSILMTCF-- 412
+ + A AV W +L+L PS L VC L +PR +L+ F
Sbjct: 688 DSSKN-----YASAIAVSFWGSNKVAVLALDPSSPLATVCDTAL--PTLPRVVLLHNFGT 740
Query: 413 -------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNV 465
+ H +LLV L DG++ ++L G+L D+K+ LG P L T V
Sbjct: 741 GGRPKDPDFHPHLLVGLADGTLVTYAL--RDGKLHDRKQSGLGNAPASLSVCDVDGRTVV 798
Query: 466 FACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQK 525
FA R +V++ ++ S V+++ + +LN ++P LA+AT S GT+ + K
Sbjct: 799 FASGARSSVLFWDRQRVRPSPVSVKDMIKGVTLNTAAFPSCLAIATSSALLIGTVRGLDK 858
Query: 526 LHIRTVPLG-EAPRRIAYQESSQTFGVITTRI------DIQEADGS 564
+ IRT+PLG ++PRR+ Y FGV TR D +E GS
Sbjct: 859 MQIRTIPLGLDSPRRLGYHAGQGVFGVACTRTTPDRIGDYEEVTGS 904
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 33/231 (14%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLIS-SKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIF 1067
++D ++F+ LH E S+++ G + F LGT + PEE EP +GRI++F
Sbjct: 907 LLDAHSFQQLHNFLCQADEEPSSVLTLPAHGSGASPAFALGTVYIRPEEREPSKGRILLF 966
Query: 1068 HYDDGK---------LQQIAEKEIKGACYSMCEFNGKLL-ASINSTVRLFEWTN------ 1111
+ L +A + G Y++ + L+ A+IN++V LF+ T
Sbjct: 967 SVSSTEGARGANVRSLHTLASVNVGGCVYALANLSENLIVAAINTSVVLFKSTENEAGES 1026
Query: 1112 -----EKELRLECSHF-NNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDY 1165
EK +HF N++ V G+ ILVGD + S+++L++ E I+RDY
Sbjct: 1027 TPLSLEKVTEWNHNHFVTNVV-----VDGERILVGDAISSVSVLKWNERLERLESIARDY 1081
Query: 1166 NPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
P W +IE + L +GA NLF S RT+L++ G HL
Sbjct: 1082 GPLWPIAIEGTGNGL-IGANADCNLFSFSLQSV----PHRTYLEKDGVYHL 1127
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 125/328 (38%), Gaps = 76/328 (23%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILE 750
LV+AK +++E+H++ PEGL+ + ++G++ ++ + + + +T + ++
Sbjct: 30 LVIAKTDKLEVHSLQPEGLKRECVLDMWGRVVGLQAVPAEEEGRSHILAMTDHPDPELIL 89
Query: 751 CRGDI-DNLEILTKA-HGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
D+ D + LT A H +++DR + +E +DP V Y G K++ +
Sbjct: 90 LSYDVKDGVASLTPAGHHSLADRAARQAEFVTDFQVDPSGTVAVASCYTGKLKVVTVSDG 149
Query: 809 NFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGR---HVKTHEISLKEKEFTKT 865
+ A + + EL + FLH Q +N R + ++ L E E +
Sbjct: 150 KLD-TAFDVSLPELNLLAFTFLHTGQEDRYSLALLHLNHRRQIQLLCRDVDLAEFELSPV 208
Query: 866 PWKQDNIEMEASL-------------VIPVPE------------PL--GGAIIIGQESIL 898
NI + A+L ++P+P+ P GG +I+G IL
Sbjct: 209 ---HSNILLTATLSDKTFPSLESPLMLVPIPQHETDADEGDDDAPAHRGGVLILGGRKIL 265
Query: 899 YHSGKS-------------------------------------YVAVAPQIIKS---STI 918
++ + + P+ + +
Sbjct: 266 FYEHSTEEQQETRKEKHRRLSKRLASEDEAKAQEAKKKEKERESRRIKPRASVKWPWAAV 325
Query: 919 VCYAKVDANGERYLLGDLAGRLFMLLLE 946
+ VDA R LLGD GRL M+ +
Sbjct: 326 TAWTAVDAERRRVLLGDAYGRLAMIAFD 353
>gi|380481704|emb|CCF41690.1| CPSF A subunit region, partial [Colletotrichum higginsianum]
Length = 932
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 251/511 (49%), Gaps = 52/511 (10%)
Query: 75 WNGWSE-RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVV 133
W + + Y L D G L +L +E E + S++ LLG S CL ++ NG++
Sbjct: 245 WAAYDDTNYFLSDDYGNLHLLTIETEGVVVTNLSLR-----LLGVTSRASCLVHMGNGLL 299
Query: 134 FVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLER-----------QG 182
F+GS GDSQL+++N ++++ ++API+D ++DL G
Sbjct: 300 FLGSHYGDSQLLQINM----ESLKTRLVQTIPSIAPILDFSIMDLGNAGDSQVGNAFSSG 355
Query: 183 QGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWAL-SIGSPKNLDNTLVLSF 240
Q ++V G + GSLR IR+ +G+E+ + DL ++G+++L S GSPK +TLV+SF
Sbjct: 356 QARIVAGCGVHQNGSLRSIRSSVGLEDIGVLEDLQDVRGLFSLRSHGSPKV--DTLVVSF 413
Query: 241 VGHTRVLTLS--GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARV 298
+ TR+ + G E E G D+ T + +LQVT + L+ +E +
Sbjct: 414 ITETRIFSFDPEGGIEEVFEFQGLALDRPTLVATTLPDGRLLQVTSTTVTLLESERGITL 473
Query: 299 SSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEI---KQLAHRALEYEVACLDIS 355
++W P+GK+I S N VL L ++G+ + L + + + +V DI
Sbjct: 474 NTWAVPDGKAIVNASANNKWVL---------LSINGTTLVSLNLLNNLSAQEQVLGRDIG 524
Query: 356 PLSNEETSSEPAKA--QLAAVGLWTDISARLLSLPSLE----EVCKEPLGGEIIPRSI-L 408
++ + A + VG W S ++ L +L+ E K+ +PR + L
Sbjct: 525 GHEDQISCIHAASDLDDVGVVGFWATGSVSIIDLRTLDALHGETIKQTDDSVSVPRDLAL 584
Query: 409 MTCFEGHCY---LLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPT---VLKTFRSLST 462
+ H L VA+ DG + F++ L+ +K VTLG+Q VL
Sbjct: 585 VQLHPPHLLGPTLFVAMEDGQVVSFNVSKQDFSLSSRKSVTLGSQQAGLHVLPRPGGEGI 644
Query: 463 TNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDE 522
+N+FA ++ ++IYSS ++++S V ++ ++E++PD++ LATD ID
Sbjct: 645 SNIFATTEHSSLIYSSEGRIIYSAATAEDVTYIAPFDSEAFPDAIFLATDQNIRIAHIDA 704
Query: 523 IQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553
++ H+ +PL E RR+AY + + FG+ T
Sbjct: 705 ERRTHVNPLPLRETVRRVAYSPALRAFGIGT 735
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 1074 LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKE----LRLECSHFNNIIALF 1129
+ Q AE+ I GAC S+ KL+A ++ TV ++E+ E LR + + +
Sbjct: 789 MGQPAERFIIGACRSLGIMGEKLVAGLSKTVVVYEYAEESSTSGALRKLATFRPSTFPVD 848
Query: 1130 LKVKGDFILVGDLMRSLTLLQYKTME----GSFEEISRDYNPNWMTSIEILDDELFLGAE 1185
+ V G+ I + DLM+S+TL+++ + E +R + W TS+ L+ +L A+
Sbjct: 849 IDVNGNMIGIADLMQSMTLVEFIPAQDGNKAKLVERARHFQYIWATSVCHLEGHSWLEAD 908
Query: 1186 NSYNLFICQKDSAATSDEDRTHLQ 1209
NL + +++ A ++ D+ ++
Sbjct: 909 AQGNLMVLRRNPDAPTEHDQKQME 932
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 111/271 (40%), Gaps = 46/271 (16%)
Query: 717 LYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKP- 775
+YG I ++ R K DLLF+ T R+ R D + T+ V + +P
Sbjct: 7 VYGTILFLQRLRPKDTKADLLFVGTDRFQ--YFTARWDPATQRLQTE---QVIEDAAEPH 61
Query: 776 ---SENGIIAIIDPEARVIGLRLYNGLFKIIPL--EKDNFELKASS---IRMEELEIQDV 827
+++ ++DP + + + L+ G+ ++ L K F S +R+ EL ++
Sbjct: 62 MRDAQSQDRCLVDPTGKFMAMHLWEGVLNVMRLGTRKGTFTRLDDSWERVRLSELFVKAS 121
Query: 828 QFLHG-CQNPTIICIHQ---DVNGRHVKTHEISLKEKEFTKT---PWKQDNIEME----- 875
F+ +PT+ ++Q + H+ + + +K T + P + E+E
Sbjct: 122 TFVPTETGHPTVAYLYQSQIEKEDAHLAIYRLMSDDKNTTVSRFDPSRDREFELEIKDPY 181
Query: 876 ASLVIPVP------------------EPLGGAIIIGQESILYHSGKSYVAVAPQIIKSST 917
A +VIPVP LGG I++G+ ++Y + V + +
Sbjct: 182 ARIVIPVPIVEDEVKRYHKRDTTGAKAQLGGLIVVGETLLVYVDTLTRTVVESGLNSPAI 241
Query: 918 IVCYAKVDANGERYLLGDLAGRLFMLLLEKE 948
V +A D Y L D G L +L +E E
Sbjct: 242 FVAWAAYDDTN--YFLSDDYGNLHLLTIETE 270
Score = 41.6 bits (96), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Query: 2 GSLRIIRNGIGIEEHACI-DLPGIKGIWAL-SIGSPKNLDNTLVLSFVGHTRVLTL 55
GSLR IR+ +G+E+ + DL ++G+++L S GSPK +TLV+SF+ TR+ +
Sbjct: 369 GSLRSIRSSVGLEDIGVLEDLQDVRGLFSLRSHGSPKV--DTLVVSFITETRIFSF 422
>gi|342885673|gb|EGU85655.1| hypothetical protein FOXB_03801 [Fusarium oxysporum Fo5176]
Length = 1160
Score = 187 bits (475), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 146/511 (28%), Positives = 252/511 (49%), Gaps = 50/511 (9%)
Query: 78 WSE----RYLLGDLAGRLFMLLLEKEEKMDG---TFSVKEP-KVELLGEI-SIPECLTYL 128
W+E YLL D GRL +L ++ + G T EP K+ I S L YL
Sbjct: 291 WAEYDGTHYLLADDYGRLDLLTIDTNLETTGVVVTGMTLEPLKIGRSPAITSRASNLVYL 350
Query: 129 DNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ------- 181
+ +FV S GDSQL ++ D V++++SF+N API+D ++D+ +
Sbjct: 351 GDSTLFVASHHGDSQLYQI----DVESATVTLVQSFSNNAPILDFSIMDMGNREGDAQAG 406
Query: 182 -----GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWAL-SIGSPKNLDN 234
GQ ++V G +++GSLR IR+G+G+E+ +D L G +G++ L S GS +L +
Sbjct: 407 NAFSSGQSRIVAGCGAYRDGSLRSIRSGVGLEDRGVLDELEGTRGLFTLRSYGS--DLVD 464
Query: 235 TLVLSFVGHTRVLTLS--GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
TLV+S + TRVL+ G E G + D +T N+ +LQ+TP + +L+
Sbjct: 465 TLVVSAITETRVLSFDREGGIEEIYSFQGMSLDTETLLASNLPNGQLLQITPRSVVLLDP 524
Query: 293 ESKARVSSWEPPNGKSISVVSCN-KNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVAC 351
E S W+ P+GKSI+ S N K +L G + L + L + A+ + +
Sbjct: 525 EGGTVTSKWDVPSGKSITRASANSKWALLSVDGTSLVSLNL-------LQNLAVNVQQSQ 577
Query: 352 LDISPLSNEETSSEPAK--AQLAAVGLWTDISARLLSLPSLE----EVCKEPLGGEIIPR 405
+ +++ + A+ L VG W+ L+ + SL+ E ++ +PR
Sbjct: 578 NNSGSQADQISCIHAARDPPDLGVVGWWSSGQISLIDMASLKPLHGESMRQTEDSATVPR 637
Query: 406 SILMTCFE----GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSL 460
I + LLVA+ DG++ F++ ++ +K VTLG+ P L +
Sbjct: 638 DIALVQLHPPEISGPTLLVAMEDGNVVTFNVSTKDFAVSGRKSVTLGSNPARLHILPQQD 697
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTI 520
T+NVF ++ ++IYS+ +++FS + ++ ++PDS+ L+TD +
Sbjct: 698 GTSNVFVTTEHASLIYSAEGRVIFSATTADDATFVAPFDSHAFPDSVILSTDQHIRICHV 757
Query: 521 DEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
D+ + H++ +P+ E RR+AY + FG+
Sbjct: 758 DKERLTHVKALPVNETVRRVAYSPGLKAFGL 788
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 139/289 (48%), Gaps = 34/289 (11%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+LVVAK NR+EI +T EGL ++ ++G IA+++ R + DLLFI T R + L
Sbjct: 28 DLVVAKANRLEIWRLTEEGLVCLQTKLIHGSIAMLQCLRPKGSETDLLFIGTDRLHYFNL 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKI--IPLEK 807
LE + + ++++ + S + ++DP R + + L+ G+ + +P+ K
Sbjct: 88 VWNPLTKQLETIERVIEDLAEPYMRHSSSQNKCLVDPTGRFLAMHLWEGVLNVFKLPIRK 147
Query: 808 --DNFELKASSIRMEELEIQDVQFLHG-CQNPTIICIHQ---DVNGRHVKTHEISLKEKE 861
N + +R+ EL ++ F+H +PTI +++ + + + ++ +K
Sbjct: 148 GSTNKLERLDQVRLTELFMKASTFIHSRTGHPTIAFLYKTQLEQEEARLVIYRLTHDDKG 207
Query: 862 FTKT---PWKQDNIEM-----EASLVIPVP----------------EPLGGAIIIGQESI 897
T + P K +++ AS++IPVP LGG ++IG+ +
Sbjct: 208 NTVSKFDPHKDRELDVVIPDPYASMLIPVPLDEEKRYHVRNTEGAKAHLGGLLVIGETLL 267
Query: 898 LYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLE 946
Y G ++ +V+ + V +A+ D G YLL D GRL +L ++
Sbjct: 268 TYFDGLTHRSVSSVLQDPRIFVSWAEYD--GTHYLLADDYGRLDLLTID 314
Score = 69.7 bits (169), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 1045 FVLGTAVVHPEENEPKQ--GRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASIN 1101
F++GT+ + +P GRI++ D + + QI +KG C + + ++A ++
Sbjct: 851 FIVGTSFISDGVEDPNGTGGRILVLGVDSNRQVYQIVSHNLKGPCRCLGMIDDNIIAGLS 910
Query: 1102 STVRLFEWTNEKE----LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTME-- 1155
TV + + E L+ + + + L + G+ I V DLM+SL+L+++ +
Sbjct: 911 KTVVAYSFLQETSSSGSLQKLAVYRPAALPVDLDISGNMIGVVDLMQSLSLVEFIPAQDG 970
Query: 1156 --GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
EE +R + P W TS+ ++ E +L A++ NL + Q++ A +++DR+ L+
Sbjct: 971 NKAKLEERARHFEPLWATSVCHIEGERWLEADSKGNLVVLQRNVDAPTEQDRSRLE 1026
Score = 45.8 bits (107), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 633 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 686
+LVVAK NR+EI +T EGL ++ ++G IA+++ R + DLLFI T R
Sbjct: 28 DLVVAKANRLEIWRLTEEGLVCLQTKLIHGSIAMLQCLRPKGSETDLLFIGTDR 81
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWAL-SIGSPKNLDNTLVLSFVGHTRVLTL 55
+GSLR IR+G+G+E+ +D L G +G++ L S GS +L +TLV+S + TRVL+
Sbjct: 425 DGSLRSIRSGVGLEDRGVLDELEGTRGLFTLRSYGS--DLVDTLVVSAITETRVLSF 479
>gi|389744702|gb|EIM85884.1| hypothetical protein STEHIDRAFT_121882 [Stereum hirsutum FP-91666
SS1]
Length = 1255
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 168/551 (30%), Positives = 237/551 (43%), Gaps = 94/551 (17%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVEL--LGEISIPECLTYLDNGVVFVGSR 138
RYL+GD GRL ML L+ S+ + + L LGE S LTYLD+ ++VGS
Sbjct: 341 RYLVGDAYGRLAMLSLD---------SLYDQGLILIPLGETSPATTLTYLDSQFLYVGSH 391
Query: 139 LGDSQLVKLNRSP--------------------------------------------DEN 154
GDSQL+K++R P
Sbjct: 392 FGDSQLIKIHRQPYGYTNTDTLPLLGILPLEPTNLASSSGKGKAKAAAGRKSDGRILGMK 451
Query: 155 GTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID 214
G Y+ V+ S+ N+API+D V D + G +VTCSGG GSLR+IRNG +E A +D
Sbjct: 452 GKYLEVVHSWRNIAPILDAVKADTDGSGLPHIVTCSGGKSTGSLRVIRNGADFQEKAVVD 511
Query: 215 -LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE----VEETEMGGFTSDQQTF 269
L + G+WAL + + LV S T + G E VE + F ++ T
Sbjct: 512 GLDNMTGLWALRSHNSDKDHSYLVASDKDETHLFRFEGPESLRRVESSSESYFRMNKPTL 571
Query: 270 YCGNV---DPRTVLQVTPSAAILISTESKARV----SSWEPPNGKSISVVSCNKNQVLCA 322
NV D +LQVT L+ ++ + S W P +GK I++ S + QVL A
Sbjct: 572 AVANVGDLDSSLILQVTSDKVQLLEFDAVLEIFHLSSHWSPESGKQITLASISPTQVLLA 631
Query: 323 -TGCDVYYLEVHGSE-IKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
G V L + S + L+ R E++ L + L N L AV W
Sbjct: 632 LDGGTVVLLGLDKSRNMTVLSTRLYNAEISALSCA-LPN----------ALGAVSFWDSD 680
Query: 381 SARLLSL----PSLEEVCKEPLGGEIIPRSILMTCFE---GHCYLLVALGDGSMFYF--- 430
L+SL P L V +G RSIL+ F+ LLV L +G M F
Sbjct: 681 RIELVSLGGSTPLLSTVTSREIGSSARARSILLHKFDSTSSEMQLLVGLTNGIMVAFVVA 740
Query: 431 SLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLR 490
S + + L D+K +G P +L T+V A R V++ +L S V L
Sbjct: 741 SSETKTPELQDRKTFAMGNMPVLLVKVMVDGHTSVLASGSRSVVVFWEKGRLKTSPVMLN 800
Query: 491 QVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTV---PLG-EAPRRIAYQESS 546
+ ++ P S+ LAT S G++ + K+HI V P G + PRRI Y +
Sbjct: 801 NIFAGAPVDTPWSPSSVVLATGSKLIIGSVHGLDKMHIVPVTATPFGLDNPRRIVYDSHA 860
Query: 547 QTFGVITTRID 557
F V TRI+
Sbjct: 861 SVFAVACTRIE 871
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 48/234 (20%)
Query: 994 QPAD-FNMEVEVHNLLIIDQNTFEIL------------------HAHQLFPGEYALSLIS 1034
+PA F EV + ++D TFE++ HA Q G A+S
Sbjct: 871 EPAPVFGEEVSRGSFKLLDDITFELIGEVPFAENTDQMQEITAIHAFQHVEGNIAIS--- 927
Query: 1035 SKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYD----DGKLQ----QIAEKEIKGAC 1086
++ +G +E EP G + IF DG ++ ++ ++E+ G
Sbjct: 928 ---------HYCVGLVTYQLDEKEPSHGELHIFSKGGTEPDGTVKADLLEVVKQEVSGCV 978
Query: 1087 YSMCEFNGKLLASINSTVRLFEW-TNEKELRLECSH--FNNIIALFLKVKGDFILVGDLM 1143
Y++ F G ++A+INSTV F+ T+ E L H +N + L V G ++L+GD +
Sbjct: 979 YALASFEGYIVAAINSTVSFFKLDTSGTEATLVKKHEWNHNYLVTSLVVSGSYLLIGDAI 1038
Query: 1144 RSLTLLQYKTMEGSFE------EISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
S+++LQ ++ + E ++RDY P W S++ E +GA + NLF
Sbjct: 1039 SSVSVLQVIQVDENGEITEKLKTVARDYGPLWPVSLQGWGKEGVIGANSDCNLF 1092
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 136/358 (37%), Gaps = 76/358 (21%)
Query: 664 IAVMKFFRGPTDKKDLLFIITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAV 723
+ V+ F P+ L L+LVVAK N +E+++ PEGLR LYG+I+V
Sbjct: 1 MKVVTTFHQPSSVAHSLKCTLSPDQLHLVVAKLNTLEVYSAQPEGLRHECTAELYGRISV 60
Query: 724 MKFFRGPTDKKDLLFIITQRYNAMILECRGDIDN-LEILTKAHGNVSDRIGKPSENGIIA 782
++ D ++L + +++ I N L ++T ++ ++I +PSE
Sbjct: 61 IRTITRKDDPDNILLMTDHPAPKLVVLSPKWISNRLSLVTVQTESLYEQIARPSEFVHNV 120
Query: 783 IIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQ------NP 836
+DP V Y G K + D + + EL I + + + +P
Sbjct: 121 FLDPYGYVGLAHCYTGKAKAFTI-NDGLLEDFCDVLVPELNILSLTLVSSPEQAIDTPDP 179
Query: 837 TIICIHQDVNGRHVK--THEISLKEKEFTKTP---WKQDNIEMEASLVIPVPE------- 884
+ + I + ++++ ++++ E E + +P + I + + PVPE
Sbjct: 180 SALAILHLDHRQNIQLLLRDLNISEYELSPSPSLMFTPATISSKVFEMAPVPENPPIIVN 239
Query: 885 --PL---------------GGAIIIG------------------------QESILYHSGK 903
PL GG ++IG QES SGK
Sbjct: 240 IPPLQLPNPEAMEGTSDFNGGLLVIGGKKLLLFELTSKEFQRKHHKRLRKQESRRSTSGK 299
Query: 904 SYVAVAPQIIKS---------------STIVCYAKVDANGERYLLGDLAGRLFMLLLE 946
P+ K S + + + G RYL+GD GRL ML L+
Sbjct: 300 DKAKAEPKEEKEGKSRSKPIASVAWPWSEVTACCQANDEGTRYLVGDAYGRLAMLSLD 357
>gi|340521192|gb|EGR51427.1| predicted protein [Trichoderma reesei QM6a]
Length = 1161
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 244/511 (47%), Gaps = 42/511 (8%)
Query: 74 LWNGWSE----RYLLGDLAGRLFMLLLEKEEKMDGT----FSVKEPKVELLGE-ISIPEC 124
++ W+E YLL D GRL ML ++ + G V E L S
Sbjct: 287 IYVAWAEYDGTHYLLADDYGRLDMLEIKTTNESTGVVVTGMEVHPFAFEDLSRYTSRASS 346
Query: 125 LTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ--- 181
L Y+ N ++F+GS GDSQL+++ D +++++ N API+D ++DL +
Sbjct: 347 LVYMGNNLLFIGSHHGDSQLLRI----DIETQQMTLLKVLPNNAPIMDFTIMDLGNREGD 402
Query: 182 ---------GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKN 231
GQ ++V G +++GSLR IR+G+G+E+ +D PG +G++ L +
Sbjct: 403 AQAGNTFSSGQARIVAGCGAYQDGSLRSIRSGVGLEDRGLLDEFPGTRGLFTLRSVDSEK 462
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILI 290
+D T+V+S + TRVL +EE G + +T N+ +LQ+TP L+
Sbjct: 463 VD-TVVVSTLAGTRVLRFEPESIEEVYSFQGMDLESETLLAANLPNGQLLQITPRVVTLL 521
Query: 291 STESKARVSSWEPPNGKSISVVSCN-KNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEV 349
ES A + SW+ P+GK I+ S N K +L G + L + +K + A E V
Sbjct: 522 DPESGASLCSWQSPDGKVITAASANTKWALLSIDGSLLVSLNLLDG-LKAVVQDASENPV 580
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPL----GGEIIPR 405
+ +S + +P VG W + ++ L +L + E L +PR
Sbjct: 581 SG-QPDQISCIHAARDPP--DFGVVGWWASGTISVVDLATLTPLHGESLRQTDDSASVPR 637
Query: 406 SILMTCFE----GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSL 460
+ + LLVAL DG++ F++ ++ +K VTLG+ P L R
Sbjct: 638 DVALVQLHPPDMSGPTLLVALEDGNVISFNVSLKGFSISGRKTVTLGSGPARLHVLPRPD 697
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTI 520
NVFA ++ ++IYSS ++V+S + ++E++PDS+ L+TD +
Sbjct: 698 GICNVFATTEHASLIYSSEGRIVYSATTADDATFVAPFDSEAFPDSIVLSTDEHIRICHV 757
Query: 521 DEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
D + H++++P+ E RR+AY + FG+
Sbjct: 758 DSERLTHVKSLPMHETVRRVAYSPGLKAFGL 788
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 137/304 (45%), Gaps = 35/304 (11%)
Query: 673 PTDKKDLLFIITQRTDL-NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPT 731
PT + L I D+ +LVVAK NR+EI V EG+ + ++G I +++ +
Sbjct: 10 PTSIRHALRIRFLSPDIEDLVVAKANRLEIWRVHEEGMTCLHTKVIHGTIDMLQRLQPKD 69
Query: 732 DKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVI 791
DLLFI T R L + + L+ + + + ++ + S++ ++DP + +
Sbjct: 70 SATDLLFIGTDRLQYFNLAWNPETNQLDAVEQTIEDTAEPYMRQSQSQNRCLVDPTGKFM 129
Query: 792 GLRLYNGLFKIIPLE-KDNFELK---ASSIRMEELEIQDVQFLHG-CQNPTIICIHQDVN 846
+ L+ G+ + L + K +R+ EL ++ FL+ +PTI ++++
Sbjct: 130 AMHLWEGVLNVFRLRIRKGLTTKLEGLDQVRLTELWMKASTFLYSRTGHPTIAFLYKNQL 189
Query: 847 GR---HVKTHEISLKEKEFTKTPWK-QDNIEME-------ASLVIPVP------------ 883
R + + ++ +K + + Q N + E AS++IPVP
Sbjct: 190 DREEARIAVYRLTEDDKPGVSSKFDPQKNRDFEEVIRDPYASMLIPVPVYEEKRYHVRNN 249
Query: 884 ----EPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGR 939
LGG +++G+ + Y +Y +V + + V +A+ D G YLL D GR
Sbjct: 250 EGARAHLGGLLVVGETLLTYFDSLTYSSVCSSLAEPKIYVAWAEYD--GTHYLLADDYGR 307
Query: 940 LFML 943
L ML
Sbjct: 308 LDML 311
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 93/177 (52%), Gaps = 12/177 (6%)
Query: 1045 FVLGTA-VVHPEENEP--KQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASI 1100
F++GT+ V P +E +GRI++ D+ + L QIA +KG C + + ++A +
Sbjct: 851 FLVGTSFVADPGTDEAGETRGRIVVLGVDESRQLYQIASHNLKGVCRCLAMLDDYIVAGL 910
Query: 1101 NSTVRLFEWTNE----KELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTME- 1155
+ TV ++ + E L S+ + L V G+ I VGDLM+SLTL+++ +
Sbjct: 911 SKTVVVYSYAQETSTAASLTKVASYRPASFPVDLDVSGNMIGVGDLMQSLTLIEFTPPQD 970
Query: 1156 ---GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
EE +R Y W TS+ LD+ +L A+ N+ + ++ A +++DR+ L+
Sbjct: 971 GKMAKLEEKARHYQQAWTTSVCALDETRWLEADAQGNVIVLRQRQEAPTEQDRSQLE 1027
Score = 41.6 bits (96), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 53
+GSLR IR+G+G+E+ +D PG +G++ L + +D T+V+S + TRVL
Sbjct: 425 DGSLRSIRSGVGLEDRGLLDEFPGTRGLFTLRSVDSEKVD-TVVVSTLAGTRVL 477
>gi|358400469|gb|EHK49795.1| hypothetical protein TRIATDRAFT_146031 [Trichoderma atroviride IMI
206040]
Length = 1161
Score = 186 bits (473), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 246/520 (47%), Gaps = 60/520 (11%)
Query: 74 LWNGWSE----RYLLGDLAGRLFMLLLEKEEKMDG---TFSVKEPKVELLGE----ISIP 122
++ W+E RY L D GRL +L ++ + G T P G+ S
Sbjct: 287 IYVAWAECDGTRYFLADDYGRLDLLEIKTTNESTGVVVTGMTVHPMA--FGDSSRYTSRA 344
Query: 123 ECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ- 181
L Y+ N ++F+GS GDSQL+ + D +++++ +N API+D ++DL +
Sbjct: 345 SSLVYMGNNLLFIGSHHGDSQLLHV----DIESQQMTLIKVISNNAPIMDFTIMDLGNRE 400
Query: 182 -----------GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWAL-SIGS 228
GQ ++V SG +++GSLR IR+G+G+E+ +D + G +G++ L S+ S
Sbjct: 401 GDAQSGNTFSSGQARIVAGSGAYQDGSLRSIRSGVGLEDRGLLDEIEGTRGLFTLRSVDS 460
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAA 287
K +T+V+S + TRVL +EE G + T N+ +LQ+TP A
Sbjct: 461 AKA--DTVVISTLAGTRVLRFEPDNIEELFSFQGMDLESPTLLAANLPSGQILQITPQAV 518
Query: 288 ILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYY-------LEVHGSEIKQL 340
L+ +S VSSW+ P GK+I+ S N L + + L+ + Q
Sbjct: 519 NLLDPDSGVSVSSWQAPEGKTITAASANTKWALLSVDGSILVSLNLLDNLKATTKDASQD 578
Query: 341 AHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPL-- 398
+ +++C+ + +P +G WT + ++ + +L + EPL
Sbjct: 579 SVSGRPDQISCI--------HAARDPQ--DFGVIGWWTSGTISVVDMATLTPLHGEPLRQ 628
Query: 399 --GGEIIPRSILMTCFE----GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPT 452
+PR + + +LVAL DG++ F++ ++ +K VTLG+ P
Sbjct: 629 TDDSASVPRDVALVQLHPPESSGPTMLVALEDGNVISFNVSVKGFAISGRKTVTLGSGPA 688
Query: 453 VLKTF-RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALAT 511
L R NVFA ++ ++IYSS ++V+S + ++E++PDS+ L+T
Sbjct: 689 RLHVLPREDGICNVFATTEHASLIYSSQGRIVYSATTAADATFVAPFDSEAFPDSIVLST 748
Query: 512 DSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
+ +D + H++ +P+ E RR+AY + FG+
Sbjct: 749 EDHIRICHVDNERLTHVKALPMYETVRRVAYSPGLRAFGL 788
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 113/237 (47%), Gaps = 19/237 (8%)
Query: 999 NMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF-GEDPNT------YFVLGTAV 1051
N EV + ++D+ F+ L L +L L+ E P+ F++GT+
Sbjct: 798 NEEVITSTVKLVDEIIFQELGTPFLLNASSSLELVECVIRAELPDANGNLAERFLVGTSF 857
Query: 1052 VHPE---ENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLF 1107
V + E+ +GRI++ D+ + L QI +KG C + N ++A + TV +
Sbjct: 858 VADQGTAESGETKGRILVLGVDESRQLYQITSHSLKGVCRCLVMMNNYIVAGLTKTVVAY 917
Query: 1108 EWTNEKELRLECSHFNNI----IALFLKVKGDFILVGDLMRSLTLLQYKT----MEGSFE 1159
+ + + + + L V G+ I +GDLM+SLTL+++ + E
Sbjct: 918 SYNQDTSTSASLTKLASFRPASFPVDLDVSGNIIGIGDLMQSLTLVEFTPPQDGKKAKLE 977
Query: 1160 EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
E +R Y W TSI LDD +L A+ N+ + +++ A +++D++ LQ + +++
Sbjct: 978 EKARHYQQAWTTSISALDDSRWLEADAQGNVIVLRQNLEAPTEQDQSQLQVISELNI 1034
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 135/296 (45%), Gaps = 34/296 (11%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+LVVAK NR+EI VT EG+ + ++G I +++ + DLLFI T R +
Sbjct: 28 DLVVAKANRLEIWRVTEEGMTCLHTKVIHGTIDMLQRLQPKDSATDLLFIGTDRLQYFNV 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPL---E 806
+ + L+ + +A + ++ + S++ ++DP + + + L+ G+ + L +
Sbjct: 88 AWNPETNQLDAVEQAIEDTAEPYMRQSQSQNRCLVDPTGKFMAMHLWEGVLNVFRLRIRK 147
Query: 807 KDNFELKA-SSIRMEELEIQDVQFLHG-CQNPTIICIHQDVNGR---HVKTHEISLKEKE 861
L+ +R+ EL ++ FLH +P I ++++ R + + ++ +K
Sbjct: 148 GSTTRLEGLDQVRLTELWMKTSTFLHSRTGHPRIAFLYKNQLDREEARIAVYRLTEDDKG 207
Query: 862 FTKTPWK-QDNIEME-------ASLVIPVP----------------EPLGGAIIIGQESI 897
+ + Q + E++ AS++IPVP LGG +++G+ +
Sbjct: 208 GVSSKFDPQKDRELDQVIPDPYASMLIPVPVYEEKRYHVRNNEGARAHLGGLLVVGETLL 267
Query: 898 LYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDG 953
Y +Y V + V +A+ D G RY L D GRL +L ++ + G
Sbjct: 268 TYFDSLTYSNVCSTLDDPKIYVAWAECD--GTRYFLADDYGRLDLLEIKTTNESTG 321
>gi|402592185|gb|EJW86114.1| CPSF A subunit region family protein [Wuchereria bancrofti]
Length = 278
Score = 184 bits (466), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/154 (55%), Positives = 116/154 (75%), Gaps = 2/154 (1%)
Query: 1065 IIFHYDDG--KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHF 1122
++F +G +++ + EKEIKGA YS+ +GKL+ ++NS VRLFEWT +KELRLECS F
Sbjct: 1 MMFQASEGPERMRLVYEKEIKGAAYSIQSMDGKLVVAVNSCVRLFEWTADKELRLECSDF 60
Query: 1123 NNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFL 1182
+N+ AL+LK K D ILVGDLMRSL+LL YK+ME +FE+++RD+ NWM++ EI+D + FL
Sbjct: 61 DNVTALYLKTKNDLILVGDLMRSLSLLSYKSMESTFEKVARDFMTNWMSACEIIDSDNFL 120
Query: 1183 GAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
GAENSYNLF KDS E+ T LQE+G +L
Sbjct: 121 GAENSYNLFTVMKDSFTVFKEEGTRLQELGLFYL 154
>gi|226480826|emb|CAX73510.1| glyceraldehyde 3-phosphate dehydrogenase [Schistosoma japonicum]
Length = 332
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 160/280 (57%), Gaps = 17/280 (6%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T DLNL++ KN +E+ VT EGL+ ++++ + KI FR + D LF++T +
Sbjct: 24 TSPNDLNLLICKNTYVEVFEVTCEGLKLIRDVPINAKIVAASLFRRKDRETDSLFLLTHK 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKII 803
I+EC + D++E +T A G+V DR + + G +IDP A I +RLY+GL KII
Sbjct: 84 AGVAIIECVRNNDSVEFVTVASGSVEDRSARIIDQGFDVLIDPGANYIVVRLYHGLLKII 143
Query: 804 PLE------------KDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVK 851
L+ + + + S+R+EE I D+ F++G PT I++D H+K
Sbjct: 144 LLQCIGDKIGTDFLDTNQWTVNTYSVRIEEGNIVDMAFIYGYSLPTFAMIYEDELVLHMK 203
Query: 852 THEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHS--GKSYVAVA 909
T+EI +E D+IE ++ L+IPVP+P GG I++G I YH+ G
Sbjct: 204 TYEIYGREPALRNVQLTLDSIEPDSKLLIPVPKPYGGVILVGDNIICYHTKDGPHISQYI 263
Query: 910 PQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEE 949
PQ K+S ++CYA VDA +RYLLGD+AGRL+M+ L E+
Sbjct: 264 PQ-AKASQVLCYAAVDA--QRYLLGDMAGRLYMVHLLSED 300
>gi|310796681|gb|EFQ32142.1| CPSF A subunit region [Glomerella graminicola M1.001]
Length = 1163
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 247/512 (48%), Gaps = 54/512 (10%)
Query: 75 WNGWSE-RYLLGDLAGRLFMLLLEKEEKM-DGTFSVKEPKVELLGEISIPECLTYLDNGV 132
W + Y L D G L +L ++ E + G F + +LG S CL Y+ +G+
Sbjct: 294 WAAYDHTNYFLSDDYGNLHLLTIQTEGVVVTGLF------MRMLGVTSRASCLVYMGDGM 347
Query: 133 VFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLER-----------Q 181
+F+GS GDSQL+ ++ + ++++ N+API+D ++DL
Sbjct: 348 LFLGSHYGDSQLLSVSVETETT----KLVQTIPNIAPILDFSIMDLGNAGDSQVGNAFSS 403
Query: 182 GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWAL-SIGSPKNLDNTLVLS 239
GQ ++V G + GSLR IR+ +G+E+ +D L ++G+++L S GS K +TLV+S
Sbjct: 404 GQARIVAGCGVHQNGSLRSIRSSVGLEDIGVLDDLRDVRGLFSLRSYGSAKV--DTLVVS 461
Query: 240 FVGHTRVLTLS--GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
F+ TRV G E + G D+ T + +LQ+T +A ++ +ES
Sbjct: 462 FITETRVFRFDPEGGIEEVFDFQGLVLDRPTLVATTLPSGHLLQITATAVTVLDSESGVT 521
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQL---AHRALEYEVACLDI 354
+S+W P+GK+I S N L L + G+ + L + + + +V C I
Sbjct: 522 LSTWAVPDGKTIVNASANNKWAL---------LSISGTTLVSLNLSDNLSAQEQVLCRPI 572
Query: 355 SPLSNEETSSEPAKA--QLAAVGLWTDISARLLSLPSLE----EVCKEPLGGEIIPRSI- 407
++ + A+ + VG W S ++ L +L E K+ +PR +
Sbjct: 573 GGQEDQISCIHAARDLDDIGVVGFWATGSVSIIHLGTLHALQGETVKQTDDSVSVPRDLA 632
Query: 408 LMTCFEGHCY---LLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPT---VLKTFRSLS 461
L+ H L VA+ DG + F++ L+ +K VTLG+Q +L
Sbjct: 633 LVQLHPPHLLGPTLFVAMEDGQVVSFNVSKEDFSLSSRKSVTLGSQQAGLHILPRPGDEG 692
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTID 521
+N+FA ++ ++IYSS ++++S V ++ ++E++PD++ LAT+ ID
Sbjct: 693 ISNIFATTEHSSLIYSSEARVMYSAATAEDVTYIAPFDSEAFPDAIFLATNRNIRIAHID 752
Query: 522 EIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553
++ H+ + L E RR+AY + + FG+ T
Sbjct: 753 PERRTHVNPLQLRETVRRVAYSPALRAFGIGT 784
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
Query: 1041 PNTYFVLGTAVVHP---EENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKL 1096
P F++GT+ + +E+ +GRI++ D D I E+KGAC S+ KL
Sbjct: 841 PAERFIVGTSYLADPDIDESGDTKGRILVLGVDSDKNPYLIVSHELKGACRSLGVMGEKL 900
Query: 1097 LASINSTVRLFEWTNEK----ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
+A ++ TV ++++ E LR + + + + V G+ I + DLM+SLTL+++
Sbjct: 901 VAGLSKTVVVYDYVEESTTSGALRKLATFRPSTFPVDIDVHGNMIGIADLMQSLTLVEFV 960
Query: 1153 TME----GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHL 1208
+ E +R + W TS+ L+ +L A+ NL + +++ A ++ DR +
Sbjct: 961 PAQDGNKAKLVERARHFQYIWATSVCHLEGHSWLEADAQGNLMVLRRNPNAPTEHDRKQM 1020
Query: 1209 QEVGTVHL 1216
+ G HL
Sbjct: 1021 EVTGEFHL 1028
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 123/294 (41%), Gaps = 38/294 (12%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+LVVA++NR+E+ VTP + + +YG I +++ R DLLF+ T R+
Sbjct: 29 SLVVARSNRLEVWRVTPTDMYMLGSAVVYGTILLLQRLRPKDSNADLLFVGTDRFQYFTA 88
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPL--EK 807
L + + ++ + +++ ++DP R + + L+ G+ ++ L K
Sbjct: 89 RWGPGTQRLHT-EQVIEDAAEPHMRDAQSQDKCLVDPTGRFMAMHLWEGVMNVMRLGNRK 147
Query: 808 DNF---ELKASSIRMEELEIQDVQFL-HGCQNPTIICIHQ---DVNGRHVKTHEISLKEK 860
F + +R+ EL ++ F+ NPTI ++Q D + + + +K
Sbjct: 148 GQFARLDGAWEQVRLSELFVKASAFVPTDTGNPTIAFLYQSNIDKEDARLAIYRLMGDDK 207
Query: 861 EFTKT---PWKQDNIEME-----ASLVIPVP------------------EPLGGAIIIGQ 894
+ P K E++ A ++IPVP LGG +++G+
Sbjct: 208 NTNVSRFDPSKDREYELDIKDPYARIIIPVPIIEDDVKRYHKRDTTGSKAQLGGLVVVGE 267
Query: 895 ESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKE 948
++Y + V + + V +A D Y L D G L +L ++ E
Sbjct: 268 TLLVYVDTLTGTVVEEGLDSPAIFVAWAAYDHTN--YFLSDDYGNLHLLTIQTE 319
Score = 42.0 bits (97), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 633 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 686
+LVVA++NR+E+ VTP + + +YG I +++ R DLLF+ T R
Sbjct: 29 SLVVARSNRLEVWRVTPTDMYMLGSAVVYGTILLLQRLRPKDSNADLLFVGTDR 82
>gi|353235645|emb|CCA67655.1| hypothetical protein PIIN_01483 [Piriformospora indica DSM 11827]
Length = 1145
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 150/516 (29%), Positives = 245/516 (47%), Gaps = 51/516 (9%)
Query: 59 EWGFHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGE 118
EW + + G+ + R LL D G+L +L L+ + K ++ + LLGE
Sbjct: 271 EWKYSDVSGYGFIDE------SRLLLSDKYGKLVLLALDNDPKKIPAGAIN---IHLLGE 321
Query: 119 ISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL 178
S C+ YL+ GV+F+GS GDSQL+K+ S + V+++F+N API D V+ DL
Sbjct: 322 ASAGSCIAYLNAGVIFIGSETGDSQLMKITSSGK-----LEVIDTFSNTAPIADAVLADL 376
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID--LPGIKGIWALSIGSPKNLDNTL 236
+ G +VTCSG + GSLR IR+G IEE A ++ +P IK I+ L S + +
Sbjct: 377 DNTGDHVVVTCSGNGRTGSLRTIRSGANIEELASMETSIP-IKNIFPLQETSGTS-HLYM 434
Query: 237 VLSFVGHTRVLTLSGA----EVEETEMGGFTSDQQTFYCGNVDPRTV-------LQVTPS 285
++S+ T+++ A E+ + G + T GNV RT+ +QVT
Sbjct: 435 LISYDQETKLVDAREAPRLSELSAHQFPGVAREFPTLAAGNVR-RTIFDTTTLAVQVTTR 493
Query: 286 AAILISTESKARVSSWEPPNGKSISVVSCNKNQV-LCATGCDVYYLEV--HGSEIKQLAH 342
AAIL +S A W SI+ S + + V L G V L+V +++ A
Sbjct: 494 AAILFDVQSGAEYCRWS----GSITTASVSGDAVCLGLRGGKVIALKVDIEAAKLVTQAE 549
Query: 343 RALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEI 402
R + E++ L I P+ + E +S + +G W D ++ L +L +V E +
Sbjct: 550 RNFDKEISTLSIEPIQSGEVTS-----NVVVIGFWEDFLVKICQLHNLAQV-GEDIETPH 603
Query: 403 IPRSILMTCF----EGHCYLLVALGDGSMFYFSLDPASGRL--TDKKKVTLGTQPTVLKT 456
P S+L F EG YLLV G+G + L R+ T ++ V LG +P +L
Sbjct: 604 TPHSVLAWNFGDRKEG-LYLLVGTGNGHILSVKLKETKNRVLATSRRTVVLGDRPVLLHR 662
Query: 457 FRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFT 516
+ A R ++ SN ++ +VN++ + + + ++ D+L +
Sbjct: 663 CSIAGAEVIMATGSRAMLLSWSNGRIAQHHVNIKNIESVAPFTSSAFGDALIFKLTKGLS 722
Query: 517 FGTIDEIQKLHIRTVPLG-EAPRRIAYQESSQTFGV 551
I +++KL I +V LG + P +AY + F V
Sbjct: 723 IARIGKLEKLKIDSVSLGYDVPNTLAYHPDIKAFAV 758
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 28/198 (14%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKF--GEDPNTYFVLGTAVVHPEE-NEPKQGRII 1065
+ID TFE L++H P E +I G+ Y ++GTA+ EE +EP +GRI+
Sbjct: 780 LIDALTFEFLNSHSFPPNEEVTKVIVGDLVMGDKQERYIIVGTAIWEDEEGSEPTKGRIL 839
Query: 1066 IFHYDDGKLQQIA---------------EKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
+F K Q+ E++I G+ + + +L +N+ V ++E
Sbjct: 840 LFRASLSKGMQVGSGAANAPPPVLTLVLEQDIPGSAVGLAVVDHRLAIIVNTIVVVYELR 899
Query: 1111 NEK-----ELRLECSHFNNIIALFLKVKGDF-ILVGDLMRSLTLLQYKTMEGSFEEISRD 1164
+ EL+ +N + GD +++GD ++S T L++ + E +++D
Sbjct: 900 RTQTAQGLELKAVDQWIHNYAIWSIVPAGDSRVVIGDALQSATTLRWNGTK--LEVVAKD 957
Query: 1165 YNPNWMTSIEILDDELFL 1182
+ + S+ + DE ++
Sbjct: 958 WTT--VNSLNVTADETYV 973
Score = 47.8 bits (112), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 136/327 (41%), Gaps = 50/327 (15%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYN--AMI 748
LVVA+ NR++++ + G++ V + L ++ + P D L IT + A++
Sbjct: 26 LVVARINRLDLYMLRSTGIQHVSSLELLPRVVALHEI-SPEDGVSALLAITDHPDCSALV 84
Query: 749 LECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
LE NL + + + G+P + I P+ R + L+ G I+ ++
Sbjct: 85 LEYSPKQRNL--VVSSSQKLVLPYGRPLSGCVNCAISPDGRHAAIALFQGTMTILSFTRE 142
Query: 809 NFELKA-----SSIRMEELEIQDVQF--LHGCQNPTIICIHQDVNG-RHVKTHEISLKEK 860
+ S+IR EL + F L I +H+ G RH+ T + L
Sbjct: 143 KGVARIARKVDSAIR--ELLLLSFAFLPLPAQDGIAISLLHKSYTGSRHISTRGVDLDTL 200
Query: 861 EFTKTPWKQDNIEM----EASLVIPVPEPL---GGAIIIGQE-SILYHSGKSYVAVAP-- 910
+ + + +IE+ E + +I VP GG ++ G + +I Y + K + +P
Sbjct: 201 DISA---EGSSIELREEDEPTRMICVPRAASKPGGLLLFGPDCTIFYQADKLHKMQSPAK 257
Query: 911 ------------QIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVK 958
+ K S + Y +D + R LL D G+L +L L+ + K ++
Sbjct: 258 SRRTSTRQPDLYEEWKYSDVSGYGFIDES--RLLLSDKYGKLVLLALDNDPKKIPAGAI- 314
Query: 959 EPKVELLGEHCKGPVVEMSSLSYIKPG 985
+ LLGE G S ++Y+ G
Sbjct: 315 --NIHLLGEASAG-----SCIAYLNAG 334
>gi|392566425|gb|EIW59601.1| hypothetical protein TRAVEDRAFT_167065 [Trametes versicolor
FP-101664 SS1]
Length = 1263
Score = 176 bits (447), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 166/592 (28%), Positives = 247/592 (41%), Gaps = 133/592 (22%)
Query: 75 WNG---WS------ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECL 125
WN WS R LLGD GRL ML + F++ LGE S L
Sbjct: 324 WNAITAWSAVDARCRRVLLGDAFGRLAMLAFNNDAV---AFTLLP-----LGETSPATSL 375
Query: 126 TYLDNGVVFVGSRLGDSQLVKLNRSPDEN------------------------------- 154
TYL + V++VGS GDSQ ++++ +P N
Sbjct: 376 TYLSSQVLYVGSHFGDSQQLRIHPAPIANASVDTLPIPKGVSTVSPSALASSPSKGKGRS 435
Query: 155 -----------------GTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGS 197
GTY+ V+++ N+API+D V+ D++ GQ Q++T SG GS
Sbjct: 436 MDLDDGLVREGRVIQTKGTYLEVLQTHDNVAPIMDAVLADIDGSGQPQVITASGARNTGS 495
Query: 198 LRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNT---LVLSFVGHTRVLTLSGAE 253
LR+IR +E A +D LPGI IW + P+ D T LV+S T VL+ +G +
Sbjct: 496 LRVIRTEADFQEQAKLDGLPGITDIWPV---RPRFNDATHTHLVVSTSRETLVLSFAGQD 552
Query: 254 V---EETEMGGFTSDQQTFYCGN-----------------VDPRTVLQVTPSAAILISTE 293
E + GF + T+ GN VD V Q+T L+ +
Sbjct: 553 TITHVEPSVAGFATHVPTYAIGNVPRRQTTTSGGRTTSSYVDSPLVAQITSEGVRLVEYD 612
Query: 294 SKAR-----VSSWEPPN-------GKSISVVSCNKNQ-VLCATGCDVYYLEVHGSEIKQL 340
+ W P G+ I + + +Q V+ +G + L + ++ Q+
Sbjct: 613 PTLNGFTPFGAGWYPKKSGDASMAGRDIVAAAMSPSQFVVGLSGGRLALLNLGANDALQV 672
Query: 341 AH-RALEYEVACLDISPLSNEETSSEPAK--AQLAAVGLWTDISARLLSLPS----LEEV 393
R E+ + +P +P K A AV W+ +LSL S L +
Sbjct: 673 VKTRDFPDEICAISCTPF-------DPTKNYATHIAVSFWSSNKIAVLSLDSPASYLGPI 725
Query: 394 CKEPLGGEIIPRSILMTCFEGHC---------YLLVALGDGSMFYFSLDPASGRLTDKKK 444
C+ L +PRSIL+ F +LL L DG++ F+L G L D K
Sbjct: 726 CEVSL--PTLPRSILLHNFGAGARPKDADFRPHLLAGLADGNVMTFAL--RDGELHDSKA 781
Query: 445 VTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYP 504
+LG P L T V A R V+Y ++ S V ++ + +LN ++P
Sbjct: 782 SSLGNAPASLSLCAVDGRTVVLAGGARSNVLYWDRQRIRPSPVGVKYMARGATLNTAAFP 841
Query: 505 DSLALATDSTFTFGTIDEIQKLHIRTVPLG-EAPRRIAYQESSQTFGVITTR 555
LA+AT S G + + K+ IRT+PLG + PR++AY Q FGV R
Sbjct: 842 SCLAIATSSALLIGNVRGVDKMQIRTIPLGMDNPRKMAYHAGQQVFGVACAR 893
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 109/221 (49%), Gaps = 17/221 (7%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLIS-SKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIF 1067
++D ++F+ LH Q P E S+++ G + F LGTAV+ PEE EP GRI++F
Sbjct: 911 LLDAHSFQQLHHFQCDPDEEPASVLALPGEGSASSPAFCLGTAVIRPEEREPSNGRILLF 970
Query: 1068 HY--DDG--KLQQIAEKEIKGACYSMCEFN-GKLLASINSTVRLFEWTN-------EKEL 1115
++G L +A +++G Y++ + G + A+IN++V L++ ++ L
Sbjct: 971 SLSSENGVRSLTTVASHKVRGCVYALQHVSEGVIAAAINTSVLLYKIREGNLGEGFDRVL 1030
Query: 1116 RLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
+N L G F+LVGD + S+++L+ E ++RDY P W +IE
Sbjct: 1031 DKAAEWNHNHFVTSLVWDGQFLLVGDAISSVSVLRVADDATKLESVARDYAPLWPVAIES 1090
Query: 1176 LDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+ +GA + NLF A R L++ G H+
Sbjct: 1091 TGNGGVIGANSDCNLF----SFALQRGPQRNGLEKNGVYHI 1127
Score = 47.8 bits (112), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 8/171 (4%)
Query: 666 VMKFFRGPTDKKDLLFIITQRTDL-NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM 724
V F + + L +T T L +LVVAK NRIE++++ P GL+ ++G+I +
Sbjct: 4 VGTFHPSSSVSRSLKCFLTPDTALEHLVVAKTNRIEVYSLQPGGLKLECTTDMWGRIVGL 63
Query: 725 KFFRGPTDKKDLLFIITQRYNA----MILECRGDIDNLEILTKAHGNVSDRIGKPSENGI 780
+ T + L ++T +A M G + L T ++ D+ +P+E
Sbjct: 64 QAVPARTQGQSNLLVMTDLPDAKLVLMTYSTEGGVAALTSGTSH--SLMDQAARPAEFVT 121
Query: 781 IAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQDVQFLH 831
+DP +V+ Y G K++ +E +A + + E+ + FL+
Sbjct: 122 DFQVDPTGQVVIASCYAGKLKVVRIEDGELG-QAFDVSLPEINLLAFTFLY 171
>gi|429850956|gb|ELA26181.1| DNA damage-binding protein 1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1409
Score = 176 bits (445), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 148/501 (29%), Positives = 243/501 (48%), Gaps = 62/501 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
Y L D G L +L ++ DG V +V LG S CL Y+ +G++F+GS GD
Sbjct: 300 YFLSDDYGNLQLLTIDT----DGVV-VTGLRVTHLGLTSRASCLVYMGDGMLFLGSHYGD 354
Query: 142 SQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLER-----------QGQGQLVTCS 190
SQL+K++ + T ++++ N+API+D ++DL GQ ++V
Sbjct: 355 SQLLKVDVTAGSETT--QIVQTIPNIAPILDFAIMDLGNAGDSQVGNAFSSGQARIVAGC 412
Query: 191 GGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWAL-SIGSPKNLDNTLVLSFVGHTRVLT 248
G + GSLR IR+ +G+E+ + DL ++G+++L S GS K D+TLV+SF+ TRV
Sbjct: 413 GVHQNGSLRSIRSSVGLEDIGVLEDLSDVRGLFSLRSNGSDK--DDTLVVSFITDTRVFR 470
Query: 249 LSGAE-VEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNG 306
E +EE + G D+ T + +LQVT ++A L+ E +S+W P G
Sbjct: 471 FDAEEGIEEVFQFQGLGLDKPTLIASTLPNGQLLQVTANSAALLDPEGGITLSTWSAPEG 530
Query: 307 KSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLA---HRALEYEVACLDISPLSNEETS 363
K I S N VL L + G+ + L+ + A +V + ++ +
Sbjct: 531 KVIVNASSNAKWVL---------LSIDGTTLVSLSLLENLAAREQVLGSGVGGEGDQISC 581
Query: 364 SEPAKA--QLAAVGLWTDISARLLSLPSLE----EVCKEPLGGEIIPRSILMTCFEGHCY 417
A + VG W S ++ L +L+ E K+ +PR+I
Sbjct: 582 IHAATDLDNVGVVGFWATGSISIIDLQTLDAMHGETIKQTDDSVSVPRNIA--------- 632
Query: 418 LLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLST---TNVFACSDRPTV 474
LV D S +SL SGR K V LG++ + L T +NVFA ++ ++
Sbjct: 633 -LVVSFDVSKDNYSL---SGR----KSVILGSKQSGLHILPRPDTDGISNVFATTEHSSL 684
Query: 475 IYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG 534
IYSS ++++S V ++ ++E++PD++ LATD ID ++ H+ +PL
Sbjct: 685 IYSSEGRIIYSAATAEDVTYIAPFDSEAFPDAIVLATDKNVRIAHIDVERRTHVNPLPLR 744
Query: 535 EAPRRIAYQESSQTFGVITTR 555
+ RR+AY + + FG+ T R
Sbjct: 745 QTVRRVAYSPALKAFGIGTIR 765
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 12/188 (6%)
Query: 1041 PNTYFVLGTA-VVHPE--ENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKL 1096
P F++GT+ + PE EN +GRI++ D D QI E+KGAC S+ KL
Sbjct: 820 PAERFIVGTSYLADPEMDENSEVKGRILVLGVDSDKNPYQIVSHELKGACRSLAVMGDKL 879
Query: 1097 LASINSTVRLFEWTNEKELR---LECSHFN-NIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
+A ++ TV ++++ E L+ + F + + L V G+ I V DLM+S+TL+++
Sbjct: 880 VAGLSKTVVVYDYAEESSTSGSLLKLATFRPSTFPVDLDVNGNMIGVADLMQSMTLIEFI 939
Query: 1153 TME----GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHL 1208
+ E +R + W T++ L+ +L++ A+ NL + +++ A ++ D+ +
Sbjct: 940 PAQDGNKARLVERARHFQYIWATAVCHLEQDLWIEADAQGNLMVLRRNPNAPTEHDKKQM 999
Query: 1209 QEVGTVHL 1216
+ + HL
Sbjct: 1000 EVISEFHL 1007
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 130/303 (42%), Gaps = 56/303 (18%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+LVV+++NR+E+ VTP + + + +YG + +++ K DLLF+ T R+
Sbjct: 27 SLVVSRSNRLEVWRVTPTDMFMLGSVSIYGTVLLLQRLTPKDSKTDLLFVGTDRFQ--YF 84
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKP----SENGIIAIIDPEARVIGLRLYNGLFKIIPL 805
R D D ++T+ V + G+P +++ ++DP R + + L+ G+ ++ L
Sbjct: 85 TARWDSDLQRLVTE---QVIEDSGEPHMREAQSQDKCLVDPSGRFMAMHLWEGVMNVMRL 141
Query: 806 -----EKDNFELKASSIRMEELEIQDVQFLHG-CQNPTIICIHQD--------------- 844
+ +R+ EL ++ F+ +PTI ++Q
Sbjct: 142 GARAPHASRLDPLWEQVRLSELSMKASTFVPTETGHPTIAFLYQSKIDKEDARLAIYRLM 201
Query: 845 VNGRHVKTHEISL-KEKEFTKTPWKQDNIEMEASLVIPVP------------------EP 885
+ R+ KT K++EF + ++ A ++IPV
Sbjct: 202 SDDRNTKTSNFDAEKDREF-----DMEILDPYARILIPVSVEEDQVKRYHKRDTSAAKAQ 256
Query: 886 LGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLL 945
LGG I++G+ ++Y + V+ I + V YA+ D Y L D G L +L +
Sbjct: 257 LGGLIVVGETLLVYVDTLTKTKVSAGIDNPTIFVAYAEYDVRN--YFLSDDYGNLQLLTI 314
Query: 946 EKE 948
+ +
Sbjct: 315 DTD 317
Score = 43.9 bits (102), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 2 GSLRIIRNGIGIEEHACI-DLPGIKGIWAL-SIGSPKNLDNTLVLSFVGHTRVLTLSGAE 59
GSLR IR+ +G+E+ + DL ++G+++L S GS K D+TLV+SF+ TRV AE
Sbjct: 418 GSLRSIRSSVGLEDIGVLEDLSDVRGLFSLRSNGSDK--DDTLVVSFITDTRVFRFD-AE 474
Query: 60 WGFHLLRGFSSLG 72
G + F LG
Sbjct: 475 EGIEEVFQFQGLG 487
>gi|315039795|ref|XP_003169275.1| hypothetical protein MGYG_08821 [Arthroderma gypseum CBS 118893]
gi|311337696|gb|EFQ96898.1| hypothetical protein MGYG_08821 [Arthroderma gypseum CBS 118893]
Length = 1076
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 201/383 (52%), Gaps = 20/383 (5%)
Query: 182 GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSF 240
GQ ++VT SG F +GSLR +R+G+GIE+ + + I +W L P+ +TL++SF
Sbjct: 333 GQTRIVTGSGAFGDGSLRSVRSGVGIEDLGVLASMEHITDLWGLRSACPEPFYDTLLVSF 392
Query: 241 VGHTRVLTLS-GAEVEETE--MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
V TRV S EVEE E G + T N+ +LQVT S A +I +S
Sbjct: 393 VNETRVFHFSPDGEVEEKEDDFLGLVFSRSTLLATNIPENRILQVTESTAKVIDLDSGMV 452
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPL 357
+ W+ + +SI+ S N + ++ G + + + S +Q+ R E + + +
Sbjct: 453 I--WQSSHNESITSASANDDYLVLVLG-GIRLVCISLSTFEQVGSRDFEVD------NQV 503
Query: 358 SNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMT-CFEG 414
S + P +A + + +I +L LP LE K+ LG GE IPRS+++ G
Sbjct: 504 SGMTIPASPIQACIVCLPQSAEIV--ILDLPGLEVKNKQALGEPGEAIPRSVIVAEILAG 561
Query: 415 HC-YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDRP 472
L V++ DG++F FS D + ++ K+TLG+ QP+ K R NVFA D P
Sbjct: 562 KPPTLFVSMADGTVFSFSFDINTFTISGSSKITLGSEQPSFKKLPRGNGQYNVFATCDHP 621
Query: 473 TVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVP 532
++I++S ++V+S V+ + +CSLN ++YP S+AL+ + +DE + I T+P
Sbjct: 622 SLIHASEGRIVYSAVDSASSSRICSLNTQAYPGSIALSNQNELKIALVDEERTTQIHTLP 681
Query: 533 LGEAPRRIAYQESSQTFGVITTR 555
+ + RR+AY + FG+ T +
Sbjct: 682 MHASVRRLAYSPLEKAFGLGTVK 704
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 124/251 (49%), Gaps = 24/251 (9%)
Query: 985 GSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF--GED-- 1040
G+ K++ +N +E + ++ D+ F L + L P E +I S+ G+D
Sbjct: 701 GTVKRTISN-----GVEEVSSSFVLADEIHFRPLSTYDLRPDELVECVIRSQVNCGKDEV 755
Query: 1041 ----PNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGK 1095
F +GTA + ++ +GRI+IF + + L I +K + GAC ++ +
Sbjct: 756 GNLMSKDLFFVGTAFLDDVGDDHIRGRILIFEVNKSRELSLIVDKSLMGACRTLAVMDPS 815
Query: 1096 LL-ASINSTVRLFEWTNEKE----LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQ 1150
LL A + +V +F+ ++ L ++ + + + V GD + V D+M+S++L+Q
Sbjct: 816 LLVAGLVKSVSVFKLARDRFGNIFLEKHTAYRTSTAPIDISVTGDTVAVADVMKSMSLVQ 875
Query: 1151 YKTMEGS-----FEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDR 1205
Y E FEEI+R Y W T++ ++++ ++L A+ NL + Q+++ ++ DR
Sbjct: 876 YTPAEKDEQEPKFEEIARHYQTLWSTAVTLIEEHVYLLADAEGNLVVLQQNTTGVTESDR 935
Query: 1206 THLQEVGTVHL 1216
LQ + L
Sbjct: 936 KRLQPTSEIRL 946
Score = 89.7 bits (221), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 131/287 (45%), Gaps = 28/287 (9%)
Query: 695 KNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDK----KDLLFIITQRYNAMILE 750
K NR+E++T + +GL +YG+I +++ PT D+LF+ T +Y L
Sbjct: 52 KANRLELYTQSADGLILQHSRAIYGRITLLQKLSRPTTAGPVLTDVLFVGTDQYAYFSLT 111
Query: 751 CRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNF 810
D L K + +++D + + + IDP + L +Y G+ +IPL
Sbjct: 112 WDAAHDQLRTERK-YIDLADGSLREAHSDDRCQIDPSGSFLTLEVYEGVVSVIPLAT--- 167
Query: 811 ELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNG------RHVK-THEISLKE---- 859
A S + + N T + G R +K TH + +
Sbjct: 168 ---ADSHKRAKSAASTSASTAPTSNRTARRAATNSQGKVRLKLRDLKHTHAVVTGDGGSA 224
Query: 860 KEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIV 919
E D +++ AS++IPVP PLGG +IIG+ SI Y ++ + +S+ V
Sbjct: 225 AELKDVTTLSDELDLGASILIPVPRPLGGLLIIGESSIKYVDVSRNETISRPLAESTVFV 284
Query: 920 CYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLG 966
+ +VD G+R+LL D GRLF L+L +D +V+ KV+LLG
Sbjct: 285 AWEQVD--GQRWLLADDYGRLFFLML----VLDADNAVESWKVDLLG 325
Score = 44.3 bits (103), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR +R+G+GIE+ + + I +W L P+ +TL++SFV TRV S
Sbjct: 346 DGSLRSVRSGVGIEDLGVLASMEHITDLWGLRSACPEPFYDTLLVSFVNETRVFHFS 402
>gi|389629928|ref|XP_003712617.1| hypothetical protein MGG_16867 [Magnaporthe oryzae 70-15]
gi|351644949|gb|EHA52810.1| hypothetical protein MGG_16867 [Magnaporthe oryzae 70-15]
gi|440464739|gb|ELQ34110.1| DNA damage-binding protein 1a [Magnaporthe oryzae Y34]
Length = 1183
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 151/550 (27%), Positives = 263/550 (47%), Gaps = 66/550 (12%)
Query: 47 VGHTRVLTLSGAEWGFHLLRGFSSLGSLWNGWSE----RYLLGDLAGRLFMLLLEKEEKM 102
VG +R+L + W + +++ ++ W++ YLL D G L +L ++ ++
Sbjct: 267 VGESRMLYIDDQSWTWTETALKNAM--VFVAWAKFDNTHYLLADDYGGLHLLTIQVKQNS 324
Query: 103 DGTFSVKEPKVELLGEISIPECLTYLD-NGVVFVGSRLGDSQLVKLNRSPD--ENGTYVS 159
D +V +G S L Y + N +FV S GDSQ +N D + +++
Sbjct: 325 DT--AVDHMSTVQIGTTSRATKLVYSETNRTLFVASHYGDSQFYDVNLFADAAKGESFLE 382
Query: 160 VMESFTNLAPIIDMVVVDLERQ------------GQGQLVTCSGGFKEGSLRIIRNGIGI 207
+ ++ N+API+D V+D+ + GQ ++VT SG K+GSLR +R+G+G+
Sbjct: 383 LRQTIENIAPILDFAVMDMGNREGDSQLGNEYSSGQARIVTASGAQKDGSLRSVRSGVGL 442
Query: 208 EEHACI--DLPGIKGIWAL-SIGSPKNLDNTLVLSFVGHTRVLTLSG-AEVEE-TEMGGF 262
E+ I ++ G+ G+++L S GS ++++TLV+SF+ TRV EVEE +++ G
Sbjct: 443 EDIGVITDEISGVTGLFSLKSYGS--DVEDTLVVSFLTETRVFRFDKQGEVEELSQLQGL 500
Query: 263 TSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA 322
Q T +D VL VT A L E +SSW P +GK I+ S N VL +
Sbjct: 501 DISQPTLLVLGLDNGHVLYVTEEKATLFDAEGGVTISSWSPTSGKPITHASSNGRWVLLS 560
Query: 323 T-GCDVYYLEVHGSEIKQLA--HRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379
G + L + G ++K A E +++C++ S P + AVG W+
Sbjct: 561 VDGRKLVSLNI-GLDLKVSAESEERDEDQISCVNAS----------PHLLDVGAVGFWSS 609
Query: 380 ISARLLSLPSLEEVCKEPL----GGEIIPRSILMT----CFEGHCYLLVALGDGSMFYFS 431
+ ++ L +LE E L ++ R +++ + L V+ DG + F
Sbjct: 610 GTISIIDLKTLEATQTEKLRRNEDDAVVAREVVLARVLPAEVANPTLFVSKDDGEVMTFV 669
Query: 432 LDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN----VFACSDRPTVIYSSNHKLVFSNV 487
+ +G L+ +K V LGT+ FR L N +F + ++I+ + ++V+S V
Sbjct: 670 YND-NGTLSSRKSVVLGTREA---RFRVLPQPNGLCSIFVTCEHSSLIHGAERRIVYSAV 725
Query: 488 NLRQVNHMCSLNAESYPDSLALATDST------FTFGTIDEIQKLHIRTVPLGEAPRRIA 541
++C + ++ D LA+AT+S ID ++ + T P+GE R IA
Sbjct: 726 TAHSAAYVCPFDTAAFRDCLAVATESAIDRRMELKISRIDRQRQCQMMTRPMGENVRSIA 785
Query: 542 YQESSQTFGV 551
Y + + FG+
Sbjct: 786 YSSADKVFGL 795
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 132/302 (43%), Gaps = 43/302 (14%)
Query: 690 NLVVAKNNRIEIHTVTPEG-LRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMI 748
+LV+AK NR+EI T EG L+ ++GKI +++ R + D+LF+ T R+
Sbjct: 28 SLVLAKTNRLEIWRRTDEGQLKLEHSQSVFGKIVMLQAVRPKDSETDMLFVGTDRFKYFT 87
Query: 749 LECRGDIDNLEILTK-AHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
E D D E++T+ A ++ ++ + + I+DP R + L L++G+ + L K
Sbjct: 88 AEY--DPDTRELVTRQAISDLGEQFVREVSSRNRCIVDPSGRYMVLLLWSGIMHVWRLHK 145
Query: 808 DNFELKAS---------SIRMEELEIQDVQFLHG-CQNPTIICIHQD------------- 844
+ K R+ EL I+D FLH +P I ++Q
Sbjct: 146 RKGQQKGQLQTRLELMDQARISELYIKDAVFLHSETAHPRIAFLYQPRPNEPDCKFASYR 205
Query: 845 --VNGRHVKTHEISLKEKEFT----------KTPWKQDNIEMEASLVIPVPEP--LGGAI 890
+ R + K++EFT P ++ E + P + LGG I
Sbjct: 206 LCTDDRDRELSRFEQKDREFTFNVPDPGSTMMIPVERVETERRHNFRNPARDECHLGGVI 265
Query: 891 IIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEK 950
++G+ +LY +S+ + + V +AK D YLL D G L +L ++ ++
Sbjct: 266 VVGESRMLYIDDQSWTWTETALKNAMVFVAWAKFDNT--HYLLADDYGGLHLLTIQVKQN 323
Query: 951 MD 952
D
Sbjct: 324 SD 325
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 32/179 (17%)
Query: 1062 GRIIIFHYDDGKLQQ-IAEKEIKGACYSMCEFNGKLLA-SINSTVRLFEW-----TNEKE 1114
GR+++F D+ + I K C + + LL ++ TV L + T+ K
Sbjct: 871 GRVLVFGVDESRSPYLIHAHSTKSGCRRIATMDDDLLVIALTKTVVLVRYSETSTTSAKF 930
Query: 1115 LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY--------------------KTM 1154
L++ ++ A+ + V G I V D+M+S+TLL+Y K +
Sbjct: 931 LKVAAFQTSSY-AVDVTVHGKLIAVADIMKSITLLEYIPGVGKSAKTGGKDKATRSDKEV 989
Query: 1155 EGSFE----EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
EGS + E+ RDY W T++ L+ + ++ A+ NL + +++A + ED+ +Q
Sbjct: 990 EGSKQAKLVEVCRDYQAMWSTAVSHLEGDSWIVADGDGNLVVLLRNTAGVTLEDKRRMQ 1048
Score = 41.6 bits (96), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
Query: 1 EGSLRIIRNGIGIEEHACI--DLPGIKGIWAL-SIGSPKNLDNTLVLSFVGHTRVL 53
+GSLR +R+G+G+E+ I ++ G+ G+++L S GS ++++TLV+SF+ TRV
Sbjct: 430 DGSLRSVRSGVGLEDIGVITDEISGVTGLFSLKSYGS--DVEDTLVVSFLTETRVF 483
>gi|440487047|gb|ELQ66855.1| DNA damage-binding protein 1a [Magnaporthe oryzae P131]
Length = 1213
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 151/550 (27%), Positives = 263/550 (47%), Gaps = 66/550 (12%)
Query: 47 VGHTRVLTLSGAEWGFHLLRGFSSLGSLWNGWSE----RYLLGDLAGRLFMLLLEKEEKM 102
VG +R+L + W + +++ ++ W++ YLL D G L +L ++ ++
Sbjct: 297 VGESRMLYIDDQSWTWTETALKNAM--VFVAWAKFDNTHYLLADDYGGLHLLTIQVKQNS 354
Query: 103 DGTFSVKEPKVELLGEISIPECLTYLD-NGVVFVGSRLGDSQLVKLNRSPD--ENGTYVS 159
D +V +G S L Y + N +FV S GDSQ +N D + +++
Sbjct: 355 DT--AVDHMSTVQIGTTSRATKLVYSETNRTLFVASHYGDSQFYDVNLFADAAKGESFLE 412
Query: 160 VMESFTNLAPIIDMVVVDLERQ------------GQGQLVTCSGGFKEGSLRIIRNGIGI 207
+ ++ N+API+D V+D+ + GQ ++VT SG K+GSLR +R+G+G+
Sbjct: 413 LRQTIENIAPILDFAVMDMGNREGDSQLGNEYSSGQARIVTASGAQKDGSLRSVRSGVGL 472
Query: 208 EEHACI--DLPGIKGIWAL-SIGSPKNLDNTLVLSFVGHTRVLTLSG-AEVEE-TEMGGF 262
E+ I ++ G+ G+++L S GS ++++TLV+SF+ TRV EVEE +++ G
Sbjct: 473 EDIGVITDEISGVTGLFSLKSYGS--DVEDTLVVSFLTETRVFRFDKQGEVEELSQLQGL 530
Query: 263 TSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA 322
Q T +D VL VT A L E +SSW P +GK I+ S N VL +
Sbjct: 531 DISQPTLLVLGLDNGHVLYVTEEKATLFDAEGGVTISSWSPTSGKPITHASSNGRWVLLS 590
Query: 323 T-GCDVYYLEVHGSEIKQLA--HRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379
G + L + G ++K A E +++C++ S P + AVG W+
Sbjct: 591 VDGRKLVSLNI-GLDLKVSAESEERDEDQISCVNAS----------PHLLDVGAVGFWSS 639
Query: 380 ISARLLSLPSLEEVCKEPL----GGEIIPRSILMT----CFEGHCYLLVALGDGSMFYFS 431
+ ++ L +LE E L ++ R +++ + L V+ DG + F
Sbjct: 640 GTISIIDLKTLEATQTEKLRRNEDDAVVAREVVLARVLPAEVANPTLFVSKDDGEVMTFV 699
Query: 432 LDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN----VFACSDRPTVIYSSNHKLVFSNV 487
+ +G L+ +K V LGT+ FR L N +F + ++I+ + ++V+S V
Sbjct: 700 YND-NGTLSSRKSVVLGTREA---RFRVLPQPNGLCSIFVTCEHSSLIHGAERRIVYSAV 755
Query: 488 NLRQVNHMCSLNAESYPDSLALATDST------FTFGTIDEIQKLHIRTVPLGEAPRRIA 541
++C + ++ D LA+AT+S ID ++ + T P+GE R IA
Sbjct: 756 TAHSAAYVCPFDTAAFRDCLAVATESAIDRRMELKISRIDRQRQCQMMTRPMGENVRSIA 815
Query: 542 YQESSQTFGV 551
Y + + FG+
Sbjct: 816 YSSADKVFGL 825
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 132/302 (43%), Gaps = 43/302 (14%)
Query: 690 NLVVAKNNRIEIHTVTPEG-LRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMI 748
+LV+AK NR+EI T EG L+ ++GKI +++ R + D+LF+ T R+
Sbjct: 58 SLVLAKTNRLEIWRRTDEGQLKLEHSQSVFGKIVMLQAVRPKDSETDMLFVGTDRFKYFT 117
Query: 749 LECRGDIDNLEILTK-AHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
E D D E++T+ A ++ ++ + + I+DP R + L L++G+ + L K
Sbjct: 118 AEY--DPDTRELVTRQAISDLGEQFVREVSSRNRCIVDPSGRYMVLLLWSGIMHVWRLHK 175
Query: 808 DNFELKAS---------SIRMEELEIQDVQFLHG-CQNPTIICIHQD------------- 844
+ K R+ EL I+D FLH +P I ++Q
Sbjct: 176 RKGQQKGQLQTRLELMDQARISELYIKDAVFLHSETAHPRIAFLYQPRPNEPDCKFASYR 235
Query: 845 --VNGRHVKTHEISLKEKEFT----------KTPWKQDNIEMEASLVIPVPEP--LGGAI 890
+ R + K++EFT P ++ E + P + LGG I
Sbjct: 236 LCTDDRDRELSRFEQKDREFTFNVPDPGSTMMIPVERVETERRHNFRNPARDECHLGGVI 295
Query: 891 IIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEK 950
++G+ +LY +S+ + + V +AK D YLL D G L +L ++ ++
Sbjct: 296 VVGESRMLYIDDQSWTWTETALKNAMVFVAWAKFD--NTHYLLADDYGGLHLLTIQVKQN 353
Query: 951 MD 952
D
Sbjct: 354 SD 355
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 32/179 (17%)
Query: 1062 GRIIIFHYDDGKLQQ-IAEKEIKGACYSMCEFNGKLLA-SINSTVRLFEW-----TNEKE 1114
GR+++F D+ + I K C + + LL ++ TV L + T+ K
Sbjct: 901 GRVLVFGVDESRSPYLIHAHSTKSGCRRIATMDDDLLVIALTKTVVLVRYSETSTTSAKF 960
Query: 1115 LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY--------------------KTM 1154
L++ ++ A+ + V G I V D+M+S+TLL+Y K +
Sbjct: 961 LKVAAFQTSSY-AVDVTVHGKLIAVADIMKSITLLEYIPGVGKSAKTGGKDKATRSDKEV 1019
Query: 1155 EGSFE----EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
EGS + E+ RDY W T++ L+ + ++ A+ NL + +++A + ED+ +Q
Sbjct: 1020 EGSKQAKLVEVCRDYQAMWSTAVSHLEGDSWIVADGDGNLVVLLRNTAGVTLEDKRRMQ 1078
Score = 41.6 bits (96), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
Query: 1 EGSLRIIRNGIGIEEHACI--DLPGIKGIWAL-SIGSPKNLDNTLVLSFVGHTRVL 53
+GSLR +R+G+G+E+ I ++ G+ G+++L S GS ++++TLV+SF+ TRV
Sbjct: 460 DGSLRSVRSGVGLEDIGVITDEISGVTGLFSLKSYGS--DVEDTLVVSFLTETRVF 513
>gi|358380497|gb|EHK18175.1| hypothetical protein TRIVIDRAFT_80808 [Trichoderma virens Gv29-8]
Length = 1161
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 245/527 (46%), Gaps = 56/527 (10%)
Query: 74 LWNGWSE----RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLG------EISIPE 123
++ W+E Y L D GRL +L ++ + G V +V + S
Sbjct: 287 IYVAWAEYDGTHYFLADDYGRLDLLEIKTTNESTGVV-VTGMEVHPITFQDSSRYTSRAS 345
Query: 124 CLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ-- 181
L Y+ N ++F+GS GDSQL+ + D +S+++ +N API+D ++DL +
Sbjct: 346 SLVYMGNNLLFIGSHHGDSQLLHI----DIETQQMSLVKVLSNNAPIMDFTIMDLGNREG 401
Query: 182 ----------GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPK 230
GQ ++V G +++GSLR IR+G+G+E+ +D G +G++ L +
Sbjct: 402 DAQSGNTFSSGQARIVAGCGAYQDGSLRSIRSGVGLEDRGLLDEFQGTRGLFTLRSVESE 461
Query: 231 NLDNTLVLSFVGHTRVLTLSGAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAIL 289
+D ++ + G TRVL +EE G + +T N+ +LQ+TP +
Sbjct: 462 KVDTVIISTLTG-TRVLRFEPDNIEELYSFQGIDLESETLLAANLPNGQLLQITPRVVNV 520
Query: 290 ISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVY----YLEVHGSEIKQLAHRAL 345
+ +S + SW+ P GK I+ S N L + + L+ + +K + ++
Sbjct: 521 LDPDSGTSLCSWQSPEGKVITAASANTKWALLSIDGSILVSLNLLDGLKAVVKNASQDSV 580
Query: 346 E---YEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPL---- 398
+++CL + +P +G WT + ++ L +L + EPL
Sbjct: 581 SGQPDQISCL--------HAARDPQD--FGVIGWWTSGTISVVDLATLTPIHGEPLRQTD 630
Query: 399 GGEIIPRSILMTCFE----GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVL 454
+PR + + +LVAL DG++ F++ ++ +K VTLG+ P L
Sbjct: 631 DSSSVPRDVALVQLHPPDISGPTMLVALEDGNVISFNVSVKGFSISGRKTVTLGSGPARL 690
Query: 455 KTF-RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDS 513
++ NVFA ++ ++IYSS ++V+S + ++E++PDS+ L+T+
Sbjct: 691 HVLPQADGICNVFATTEHASLIYSSEGRVVYSATTADDATFVAPFDSEAFPDSIVLSTEE 750
Query: 514 TFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQE 560
+D + H++ +P+ E RR+AY + FG+ R ++ E
Sbjct: 751 HIRICHVDNERLTHVKALPMSETVRRVAYSPGLKAFGLGCIRKELIE 797
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 111/230 (48%), Gaps = 19/230 (8%)
Query: 999 NMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGED-------PNTYFVLGTAV 1051
N EV + ++D+ F+ L G +L L+ + P F++GT+
Sbjct: 798 NEEVITSTIRLVDEIIFQELGKPFELNGSASLELVECIIRAELPDSNGVPAERFLVGTSF 857
Query: 1052 VH---PEENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLF 1107
V EE +GRI++ D+ + L QIA +KG C + + ++A + TV ++
Sbjct: 858 VADPGTEEAGETRGRILVLGVDESRQLYQIASHNLKGVCRCLAIMDDYIVAGLTKTVVVY 917
Query: 1108 EWTNEKELRLECSHFNNI----IALFLKVKGDFILVGDLMRSLTLLQYKTMEG----SFE 1159
+T E + + + L V G+ I +GDLM+SLTL+++ + + E
Sbjct: 918 GYTQETSTAASLNKLASFRPASFPIDLDVSGNIIGIGDLMQSLTLVEFTPGQDGKKPTLE 977
Query: 1160 EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
E +R Y W TS+ LD+ +L A+ N+ + +++ A +++DR+ L+
Sbjct: 978 EKARHYQQAWTTSVSALDESRWLEADAQGNIIVLRQNQEAPTEQDRSQLE 1027
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 138/314 (43%), Gaps = 35/314 (11%)
Query: 673 PTDKKDLLFIITQRTDL-NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPT 731
PT + L I D+ +LVVAK NR+EI VT EG+ + ++G I +++ +
Sbjct: 10 PTSIRHALRIRFLSPDIEDLVVAKANRLEIWRVTEEGMTCLHTKVIHGTIDMLQRLQPKD 69
Query: 732 DKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVI 791
DLLFI T R + + + L+ + + + ++ + S++ ++DP + +
Sbjct: 70 SATDLLFIGTDRLQYFNIAWNPETNQLDAVEQTIHDSAEPYMRQSQSQNRCLVDPTGKFM 129
Query: 792 GLRLYNGLFKIIPLE-KDNFELK---ASSIRMEELEIQDVQFLHG-CQNPTIICIHQDVN 846
+ L+ G+ + L + + +R+ EL ++ FLH +P I ++++
Sbjct: 130 AMHLWEGVLNVFRLRIRKGLTTRLEVLDQVRLTELWMKSSVFLHSRTGHPRIAFLYKNQL 189
Query: 847 GR---HVKTHEISLKEKEFTKT---PWKQDNIEM-----EASLVIPVP------------ 883
R V + ++ +K + P K ++ AS++IPVP
Sbjct: 190 DREEARVAVYRLTEDDKGGVSSKFDPLKDRELDQVIPDPYASMLIPVPVYEEKRYHVRNN 249
Query: 884 ----EPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGR 939
LGG +++G+ + Y +Y +V I V +A+ D G Y L D GR
Sbjct: 250 EGARAHLGGLLVVGETLLTYFDSLTYSSVCSSIEDPKIYVAWAEYD--GTHYFLADDYGR 307
Query: 940 LFMLLLEKEEKMDG 953
L +L ++ + G
Sbjct: 308 LDLLEIKTTNESTG 321
>gi|328858656|gb|EGG07768.1| hypothetical protein MELLADRAFT_105631 [Melampsora larici-populina
98AG31]
Length = 1216
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 141/509 (27%), Positives = 233/509 (45%), Gaps = 55/509 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+GDL G + ++ LE+ E ++ G++S PE L Y+ + +++ S GD
Sbjct: 342 WLIGDLYGHVLVIRLERPEGGKPLLRYQQA-----GQVSSPEALVYISDRFIYLASHYGD 396
Query: 142 SQLVKLNR--SPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
SQL++++ S V+ ++ NLAPI D+ VVD QLVTCSG +++GSLR
Sbjct: 397 SQLLRISALDSALAQDCQPEVVANYPNLAPISDVCVVDQSEGFDHQLVTCSGAYQDGSLR 456
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS----GAEVE 255
II +GI + + + + G + IW SI +P + TL++ F TR L + +VE
Sbjct: 457 IITHGITLTDLGMLPIAGAEHIW--SIDTPHSPQVTLIVGFRNETRFLIIENDQFSQDVE 514
Query: 256 ETE-MGGFTSDQQTFYCGNVDPRT------VLQVTPSAAILISTESKARVSSWEPPNGKS 308
E + GF SD++T G + + +QVT I+ + WEP +
Sbjct: 515 ELDSFSGFKSDRRTILAGQIISQGHHVQAFPIQVTQEEVIV------GEMFRWEPTSNDL 568
Query: 309 ISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAK 368
I+V + + + A +V L V + + Q EV+CL I P
Sbjct: 569 ITVAAIGASLTVVALQREVLLLHVKDNLLVQSESIRFPNEVSCLAIDP-----------S 617
Query: 369 AQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-EG-HCYLLVALGDGS 426
++ AVG W S L+SL + G + S+L T F EG +LL + DG
Sbjct: 618 QKVLAVGQWISNSIALVSLDQMNVSTTIETGSDFGVHSVLFTNFGEGIDPHLLAGMDDGE 677
Query: 427 MFYFSLDP-ASGRLTD---KKKVTLGTQPTVLK-------TFRSLSTTNVFACSDRPTVI 475
+ L +G L ++ V LG +P + T + L V+ S+ PT++
Sbjct: 678 LISIKLQGLENGSLVQEQSRRTVVLGHRPITMSRIVLDIPTDQQLGKPAVWIHSEHPTLM 737
Query: 476 YSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPL-G 534
+ +L + V L + + + T G ID ++K+HI +PL G
Sbjct: 738 IEVDGRLKYRPVALGDATDAIKIGTR----GVGVVTSEGIRLGRIDSLEKIHISKIPLGG 793
Query: 535 EAPRRIAYQESSQTFGVITTRIDIQEADG 563
E P+RIA+ +S + +GV+ + + G
Sbjct: 794 EQPKRIAHSKSMRAYGVVCVSQKVNQQTG 822
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 12/198 (6%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIF- 1067
IID TFE+L QL E S+ + + G+D F++GT V+P E++ GRI+
Sbjct: 832 IIDDVTFELLFDFQLLSIEQGTSIAAIELGKDLIEDFIIGTGFVNPNESQSNTGRILTIG 891
Query: 1068 ----HYDDGKLQQIAEK---EIKGACYSMCEF-NGKLLASINSTVRLFEWTNEKELRLEC 1119
H +G L++ K ++KG + + GK +AS N+ V F E+E
Sbjct: 892 LSSKHDQEGNLREFKLKRMTKVKGTVHGLGGLPGGKFVASANAFVHAFGINEEEEDEGFE 951
Query: 1120 ---SHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
+ ++ + + ++I+VGDL +S+ +L++ + S + + RDY+ + I ++
Sbjct: 952 VLDTWGGGFVSQTVLTEKNWIIVGDLYKSIVVLEFDLKKFSLKVLGRDYSAMSVRPIGMI 1011
Query: 1177 DDELFLGAENSYNLFICQ 1194
D +F+ A+ +NLF +
Sbjct: 1012 SDRVFVAADTEFNLFTVE 1029
Score = 56.6 bits (135), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/339 (18%), Positives = 143/339 (42%), Gaps = 85/339 (25%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+L++ K +++EI+ + P+ L + + ++G I ++ + ++ L ++T N L
Sbjct: 28 SLILCKPSQLEIYAIEPDQLNLLHTLPVFGLIDHIQSYIKQPNQTATLLVLTSELNLFTL 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE--- 806
R + ++T A +++ +P++ +I+DP +R + L NG+ +IPLE
Sbjct: 88 --RYCPQSKSVITTATISLNQPGARPADYLQTSIVDPHSRCLVLHALNGILHLIPLEPSS 145
Query: 807 ----------------KDNFELKAS---------------------SIRMEELEIQDVQF 829
+ LK++ +R+ E+ + + F
Sbjct: 146 KPKPKHLEPSLGGRRKRSTISLKSNHPPNPDLDTNIDPDSELYQIVQLRLNEVNVHALDF 205
Query: 830 --LHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTPWKQDNI------EMEASLVIP 881
L PT++ ++ + G+ V + + + QD +++ SL+IP
Sbjct: 206 AALPAHLPPTLLILYSNHMGQRV----LRSRSIDLITANCDQDICPNHLCPDLDTSLIIP 261
Query: 882 VPEPLGGAIIIGQESI--LY---------------------HSGKSYVAVAPQIIKSSTI 918
+P+ G +++G++S+ +Y +G + + +++K T
Sbjct: 262 IPDDQGSVLLVGEDSVELVYLTDRLPNPTGKGKSRDRSVDSRTGATRAPESDKLLKHVTS 321
Query: 919 V--------CYAKVDANGERYLLGDLAGRLFMLLLEKEE 949
+ C+ KV+ + +L+GDL G + ++ LE+ E
Sbjct: 322 INIPLGSYTCFCKVEDQPDVWLIGDLYGHVLVIRLERPE 360
>gi|18377609|gb|AAL66955.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
Length = 270
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 106/141 (75%), Gaps = 4/141 (2%)
Query: 1080 KEIKGACYSMCEFNGKLLASINSTVRLFEWT----NEKELRLECSHFNNIIALFLKVKGD 1135
KE KGA YS+ FNGKLLA+IN ++L++W +EL+ EC H +I+AL+++ +GD
Sbjct: 1 KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGD 60
Query: 1136 FILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQK 1195
FI+VGDLM+S++LL YK EG+ EE +RDYN NWM+++EILDD+++LGAEN++NL +K
Sbjct: 61 FIVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKK 120
Query: 1196 DSAATSDEDRTHLQEVGTVHL 1216
+S +DE+R L+ VG HL
Sbjct: 121 NSEGATDEERGRLEVVGEYHL 141
>gi|384490729|gb|EIE81951.1| hypothetical protein RO3G_06656 [Rhizopus delemar RA 99-880]
Length = 967
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 199/430 (46%), Gaps = 27/430 (6%)
Query: 79 SERYLLGDLAGRLFMLLLE----KEEKMDGTFSVKEPKVELLGE-------ISIPECLTY 127
S RYLLGD G L++ +E K + TF + P E +S P C+
Sbjct: 257 SNRYLLGDEEGYLYVFSIETSHNKVVNLSSTFIGQVPSFNQNIESKANHPQVSRPSCIVD 316
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLV 187
L N + ++GS GDS L++L + +++ V V+ +++ L PI+D + D +QG+ +
Sbjct: 317 LGNLMFYIGSTHGDSCLIQLIKGQEKSKYTVKVLSTYSCLGPIVDFCLYDYNKQGKQTMA 376
Query: 188 TCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL 247
C+G K+ S+RI+ NGIG + +D P + +W LS+ + ++L++S T +L
Sbjct: 377 CCAGVEKDASIRIVENGIGFSKKYALDFPLVYAMWTLSLDGDR---DSLLISTALDTVLL 433
Query: 248 TLSGAE----VEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEP 303
S E + T + Q T + V + ++ + E + W+P
Sbjct: 434 KPSDQEELEVTQHTSYSALDTSQMTLAADMFNSFIVQATSSFVRMMTNDEYGQLIGEWKP 493
Query: 304 PNGKSISVVSCNKNQ-VLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEET 362
P G SI++ + V+C G + YLE+ + + R L+ +C+ IS ET
Sbjct: 494 PTGTSIAIAKIKDSHCVVCCEGDMIIYLEMTNKGFIEKSKRQLK-NASCISISTRKENET 552
Query: 363 SSEPAKAQLAAVGLWTDISARLLSLPSLEEVCK-EPLGGEIIPRSILMTCFEGHCYLLVA 421
+ A ++ S L LP LE V + + + P +L+ E YL+V
Sbjct: 553 LYDYVVAGTCG----SNPSVVFLQLPDLEVVLEHKDMPSTTGPNDLLVVTMEKVLYLMVL 608
Query: 422 LGDGSMFYFSLDPASGR--LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
LGDG MF + ++ S L + ++ +GT T + ++ VF RPTVI S +
Sbjct: 609 LGDGQMFSYHMEVGSEDVILESETEIMVGTYCTAMYPYQHGQEKRVFVAGQRPTVISSFH 668
Query: 480 HKLVFSNVNL 489
L +VNL
Sbjct: 669 QTLFVYSVNL 678
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 12/171 (7%)
Query: 1029 ALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYS 1088
AL++ S DPN + T V + + Q F ++ + + I ++ G Y
Sbjct: 698 ALAVASCTNVHDPNKNIIERTGKVRLLDAQTFQA----FTIENSRCELIDAVDMPGVVYR 753
Query: 1089 MCEFNGKLLASINSTVR-LFEWTNE--KELRLECSHF--NNIIALFLKV-KGDFILVGDL 1142
M ++A+++ + L+ + + K R+E NN++AL + D +LVGDL
Sbjct: 754 MESIKNTIIAAVDGKIYGLYNFKPDLLKGERIEFKFLLHNNVVALDMDTDNNDTLLVGDL 813
Query: 1143 MRSLTLLQYKTMEGSFEEI--SRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
M S++LL+ + E S + + D WMT+++ +++ + +GA++ +NLF
Sbjct: 814 MESMSLLKVEKDEESLKLSLEAVDNKQVWMTAVKFVNENVLIGADDRHNLF 864
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 108/257 (42%), Gaps = 27/257 (10%)
Query: 710 RPVKE---IFLYGKIAVMKFFRGPTDKKDLLFIIT--QRYNAMILECRGDIDNLEILTKA 764
+P +E + +YG I ++ + P LFI+T Q Y + + I+T+
Sbjct: 26 QPAEENLIVCIYGTIRNLQVIQLPDKSTCSLFILTVHQCYTIITYSLKTQ----SIVTEF 81
Query: 765 HGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK---------DNFELKAS 815
G ++ + ++ ++ +D + +I + + G IP K N + KAS
Sbjct: 82 SGQLNITNARETDQQVVVTVDKTSEMIFVSAFTGYVIAIPFGKPAPGAKLTSKNRDTKAS 141
Query: 816 S-----IRMEELEIQDVQFLH-GCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTPWKQ 869
IR E + V L G ++ +D+ + +KT + + K+ +
Sbjct: 142 RFMQIPIRTNEFDFISVAALQQGGYLSVLVGEMEDL--KTIKTFKYRDEYKDLLERNKST 199
Query: 870 DNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGE 929
+E ++PVPEPLGG ++IG+ I Y + I + + + +
Sbjct: 200 IKVEASTHALVPVPEPLGGLLVIGEYIITYFDPLTNTNRELS-IDPARVTAWEFMKDESN 258
Query: 930 RYLLGDLAGRLFMLLLE 946
RYLLGD G L++ +E
Sbjct: 259 RYLLGDEEGYLYVFSIE 275
>gi|392591958|gb|EIW81285.1| hypothetical protein CONPUDRAFT_56293 [Coniophora puteana
RWD-64-598 SS2]
Length = 1245
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 152/569 (26%), Positives = 237/569 (41%), Gaps = 97/569 (17%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
R+LLGD GRL ML ++ T LGE S LTYL N VV++GS
Sbjct: 324 RRFLLGDKFGRLVMLCVDISSNSSLTLIA-------LGETSPATTLTYLSNQVVYLGSHY 376
Query: 140 GDSQLVKL--------------------------NRSPDEN-------------GTYVSV 160
GDSQL+++ + SP + G++++
Sbjct: 377 GDSQLLQISPSRLSDSDTPTLPVPGDIHTVTHIPHSSPGSDYDRRHRGFIVNGRGSHLTE 436
Query: 161 MESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID-LPGIK 219
++ F N+API D +VD + GQ ++VTCSGG GS+R++R+G +E A I +P I
Sbjct: 437 VDRFQNIAPIYDAALVDPDNSGQYEVVTCSGGQNTGSIRLVRSGADFQEAAAIGGIPNIT 496
Query: 220 GIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE-VEETEMGGF-TSDQQTFYCGN---- 273
IW + + +V S T V + V GF T ++T N
Sbjct: 497 NIWPVRSLYSDPIHTHIVASTPQETYVFRIDNKHTVSHVADSGFVTGKKRTLVVQNLQKK 556
Query: 274 -----------VDPRTVLQVTPSAAILISTESK----ARVSSWEPPNG-----------K 307
+D VLQVT +L++ + RV G +
Sbjct: 557 VPKEAGQGLTYMDSSLVLQVTSDELVLLNLDKGLGEFTRVGDGVCKMGQLAGGKPGWIDR 616
Query: 308 SISVVSCNKNQVLCATGCD-VYYLEVHGSEIKQLAHRALEYEVACL-DISPLSNEETSSE 365
I S N +QV+ + + ++ K + +R + +IS +S
Sbjct: 617 EIVAASANASQVVLGLSFGRLAVVNFADNKFKLVGYRDFTNPSGGIAEISAVSCTPADQS 676
Query: 366 PAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHC-----YLLV 420
+ + +AAV W ++SL S + +PRS+LM F G +LLV
Sbjct: 677 KSFSPMAAVAFWQTHRVEIISLGSPFPTLCASVSLPSLPRSLLMHRFAGESANAPPHLLV 736
Query: 421 ALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNH 480
DG + F L + L ++K++ +G P T ++ T VFAC R +V++
Sbjct: 737 GRADGVVATFVLKDKA--LVEQKQIPVGNLPVTFHTCKAKGRTAVFACGSRTSVLFWEKD 794
Query: 481 KLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG-EAPRR 539
+L S + L++V SL+ Y SL LAT G + ++KLHIR++ G + PRR
Sbjct: 795 RLRHSPLILKEVAAAASLHTHDYRSSLVLATSEGLVIGDVQNLEKLHIRSIHTGLDNPRR 854
Query: 540 IAYQESSQTFGVITTRIDIQEADGSTPVR 568
I++ + V R TPVR
Sbjct: 855 ISHSPVHKALAVGCVR--------HTPVR 875
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 100/175 (57%), Gaps = 15/175 (8%)
Query: 1029 ALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQI----AEKEIKG 1084
A+ +S + E+ FV+GT ++ ENE GR+++ D + + A +++KG
Sbjct: 910 AIKALSVRVAEEAKDCFVVGTVIIDSLENESSSGRLLLVEPDYSRGESFVAVSASEKVKG 969
Query: 1085 ACYSMCEFNGKLLASINSTVRLFEWTNEKELR-------LECSHFNNIIALFLKVKGDFI 1137
Y++ +G ++A++NS V ++ + R +E +H N + L +G+ +
Sbjct: 970 CVYAVAAVDGLVVAAVNSAVVIYSIEADDHTRALSFVKKVEWNH--NYVVANLVSRGNLL 1027
Query: 1138 LVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI 1192
LVGD + S+TLLQY+ G+ + ++RDY+P W TS+E+LD+ +GA+N NLF+
Sbjct: 1028 LVGDAISSVTLLQYE--RGALQNVARDYSPLWPTSVEMLDERNVIGADNDCNLFM 1080
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 135/325 (41%), Gaps = 82/325 (25%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKK--------------DL 736
LV+AK N+++I+++ PEGL+ + ++G++ ++ P K +L
Sbjct: 30 LVIAKLNQLDIYSLQPEGLKYEDGLEIWGRVRAVRVV--PIKKSTEMHLLVLTDHPEPEL 87
Query: 737 LFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLY 796
+FI + + E R +TK ++++R G+ +E + ++DP ++ + Y
Sbjct: 88 VFITYTTHTSRKNELR--------ITKKL-SLAERTGRIAEFFVDLLVDPTGQLAIVSTY 138
Query: 797 NGLFKIIPLEKDNF--ELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGR-HVKTH 853
G K++ L+ + + S+ + L + + L + T+ +H D R + T
Sbjct: 139 AGKLKVVQLDDGEYDSDFDVSTTELNLLSLATI--LPSPDDLTVALLHVDYQQRLQLLTR 196
Query: 854 EISLKEKEFTKTP----------WKQDNIEMEASLVIPVP-------EPLGGAIIIGQES 896
++SLKE + + P K +++ E +I VP GG ++IG
Sbjct: 197 DLSLKELQLSPLPSAVLPSVPLAAKHFSVDEEVPKLIHVPISEKDEESFAGGVLVIGGSK 256
Query: 897 ILYH------------------SGKSYVAVAPQIIKS-----------------STIVCY 921
I + K A + +++K + + +
Sbjct: 257 IFLYDLAPAEKQRKQKEKQRRTQKKKASADSDEVMKDEGKEKKKKARASVEWPWAEVSAW 316
Query: 922 AKVDANGERYLLGDLAGRLFMLLLE 946
+VD G R+LLGD GRL ML ++
Sbjct: 317 CQVDDVGRRFLLGDKFGRLVMLCVD 341
>gi|449549048|gb|EMD40014.1| hypothetical protein CERSUDRAFT_63520 [Ceriporiopsis subvermispora
B]
Length = 1265
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 212/476 (44%), Gaps = 63/476 (13%)
Query: 155 GTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID 214
G ++ V+++F N+API+D V+ DL+ GQ Q++TCSGG G+L+++R G +E A ++
Sbjct: 451 GQFIEVLDTFQNIAPIVDAVLADLDDSGQSQIITCSGGRNSGALKVVRTGADFQELARVN 510
Query: 215 -LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEV---EETEMGGFTSDQQTFY 270
+ GI +W + + D+ LV S T V ++V ++ GF + T
Sbjct: 511 GITGITSLWPVRSRFEHSTDSHLVASTETETYVFKFDSSDVITQLDSSADGFITTAPTLA 570
Query: 271 CGN-----------------VDPRTVLQVTPSAAILISTESKARVSS-----WEPPNGKS 308
N VD V+QVTP L+ ++ + S W+P + +
Sbjct: 571 AANIPRRVSTNAGGRVSSSYVDSSLVIQVTPEMITLLEYDAALGLFSLVGEGWDPKSQGA 630
Query: 309 IS----VVSCNKNQVLCATGCD---VYYLEVHGSEIKQLAH-RALEYEV-ACLDISPLSN 359
I +V+ + N G D V L + + Q+ R V LD+S +S
Sbjct: 631 IGGRRRIVAADVNASQIVVGLDGGKVCLLNLADNSRFQVQRSRGFADPVYGPLDVSAVSC 690
Query: 360 EETSSEPAKAQLAAVGLWTDISARLLSLPS----LEEVCKEPLGGEIIPRSILMTCF--- 412
A AV W ++LS+ S L VC E G +PRS+L+ F
Sbjct: 691 VPFDRTKNFATNIAVAFWGTNKVQILSISSQDATLATVC-EVSGLPSLPRSVLLHNFGTG 749
Query: 413 ------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVF 466
+ H ++LV L DGS+ FS+ L +KK +LG P L VF
Sbjct: 750 RTKKEPDFHPHVLVGLVDGSVISFSV--VENELKEKKVFSLGIAPVSLSRCEVDGKITVF 807
Query: 467 ACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKL 526
A R +V+Y +L S V ++ + SLN + SL LA S GTI + K+
Sbjct: 808 AVGSRTSVLYWDKQRLTNSPVMIKDMAVGTSLNTSYFRSSLVLAASSGLIIGTIRGVDKM 867
Query: 527 HIRTVPLG-EAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQNTTSS 581
IR++P G PRRIAY + FGV R + P+RP + Q TTSS
Sbjct: 868 QIRSIPFGLSDPRRIAYHSRLKLFGVGCNR--------TMPLRPG---EFQGTTSS 912
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 18/220 (8%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT-YFVLGTAVVHPEENEPKQGRIIIF 1067
IID TF L +L E S+++ G D + F +GT EE EP GR+++F
Sbjct: 915 IIDATTFNGLWDFELQANEEVSSVMALPDGTDGRSPCFCVGTVFFEVEETEPTSGRLLLF 974
Query: 1068 HYD--------DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW--TNEKELRL 1117
DG+L+ + +++KG + + N + A+INS V LF TN++
Sbjct: 975 AIGSDGATSSADGELRLVTTQDVKGCVFQITSVNNFIAAAINSNVVLFALRDTNKQYALQ 1034
Query: 1118 ECSHFN-NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
+ + +N N L GD ++VGD + S++LL+ E +SRDY+P W ++E
Sbjct: 1035 QVADWNHNYFVTNLASHGDRLIVGDAISSVSLLRVSVAR--IECLSRDYSPLWPVAVEAT 1092
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+ +GA + NLF A + R L+ G+ HL
Sbjct: 1093 AENQIIGANSDCNLF----SFALQHIDGRKVLERDGSYHL 1128
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 136/353 (38%), Gaps = 73/353 (20%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKD----LLFIITQRYNA 746
LV+AK NR+ + ++ PEGLR ++G++ ++ P D L I
Sbjct: 29 LVIAKTNRLVVLSIQPEGLREESTFDIWGRVLSLRTI--PVDDTGSCNILALIDHPDAKL 86
Query: 747 MILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE 806
++L D L ++TK H ++ +R G+ +E + P V + Y G K++ +
Sbjct: 87 IVLGGVADDSGLTLVTKGHVSLQERGGRVAEFLTDVFVHPGGEVAVVSCYAGKLKVVQFK 146
Query: 807 KDNFELKAS-SIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVK--THEISLKEKEFT 863
+ N + A + + E+ I + FLH N I+ I + R V+ + ++ L+ E
Sbjct: 147 EGNIDTHAHFDVSIPEMNILALNFLHTDDNQYILAIINYDHQRRVQLLSRKLDLENYELD 206
Query: 864 KTP-----------WKQDNIEMEASLVIPVPEP----LGGAIIIGQESILYH-------- 900
+P +IE LV PE LGG +++G IL+
Sbjct: 207 PSPSVVLLSTQLSSSHFPSIETPPLLVPIFPEGDGGHLGGVLVLGGRKILFFEHTSEDRQ 266
Query: 901 --------------SGKSYVAVAPQIIKS------------------STIVCYAKVDANG 928
S K + VA K S + + +D
Sbjct: 267 QIKREKQIRLERRLSSKDPMEVAKAREKEKERDARKVKPKFSVKWPWSDVTAWCPLDEES 326
Query: 929 ERYLLGDLAGRLFMLLLEK---------EEKMDGTFSVKEPKVELLGEHCKGP 972
R+L+GD GRL +L+L+ E T S + +V +G H P
Sbjct: 327 RRFLVGDAYGRLALLVLDTTGLIVSPLGETSPPTTLSYLDSQVVYVGSHMGNP 379
>gi|403415203|emb|CCM01903.1| predicted protein [Fibroporia radiculosa]
Length = 1267
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 155/599 (25%), Positives = 251/599 (41%), Gaps = 125/599 (20%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
R+++GD GRL ML + +G + LGE S LTYL + V+++GS
Sbjct: 332 RRFIIGDTFGRLAMLAFDD---ANGLLLIP------LGETSSAVSLTYLSSQVLYLGSHF 382
Query: 140 GDSQLVKLNRSP--------------------------------DEN------------- 154
G+SQL+++++SP D++
Sbjct: 383 GESQLLRIHQSPFTERDAETLPIPDHVKSISAVSLPGGKGKERLDDSLEPSKKERGGQVV 442
Query: 155 ---GTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHA 211
G +V V++S+ N+API+D V+VDL+ GQ Q++ CSGG G+L+IIR G +E A
Sbjct: 443 LGKGKFVEVLDSYENIAPIMDAVMVDLDGSGQPQIIACSGGRNSGALKIIRTGADFQEQA 502
Query: 212 CI-DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG----GFTSDQ 266
I + + IW + +D+ L+ + + T V +L G T M GF +
Sbjct: 503 VIRGIENVTDIWPIRSHYEDIIDSHLIATTLHETLVFSLDGRNA-VTHMDPSDHGFITRS 561
Query: 267 QTFYCGNVDPRTVLQ--------VTPSAAILISTESKARV--------------SSWEPP 304
T GN+ R Q S+ +L ++ K RV W+
Sbjct: 562 PTLAVGNIPRRATTQNGGRVVSSYVDSSLVLQVSQEKVRVIEHDAALGLFVPVGDGWDAT 621
Query: 305 N-GKSISVVSCNKNQ-VLCATGCDVYYLEVHGSE-IKQLAHRAL-EYEVACLDISPLSNE 360
G++I + N +Q VL +G + L + +E I++L +R + L+IS +S
Sbjct: 622 KEGRTIVAAAINSSQFVLGLSGGRLILLNLGENEQIQELKYRDFGDRTYGMLEISAVSCS 681
Query: 361 ETSSEPAKAQLAAVGLWTDISARLLSLPS----LEEVCKEP-------------LGGEII 403
+ A V W +LSL S L +C+ G +
Sbjct: 682 PFDTTKKYATCIGVSFWGTNRIAILSLESATSYLTTICESDPLPSLPRSLLLHNFGQDHN 741
Query: 404 PRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTT 463
P+ + H ++L L DG++ FS L DKK LG P L
Sbjct: 742 PKGA-----DYHPHVLAGLVDGTLVSFSFREKD--LKDKKTFALGDVPVALAKSTVDGKP 794
Query: 464 NVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI 523
+FA R +V+Y +L S V ++ S+++ ++P L LAT ST G + +
Sbjct: 795 AIFASGSRASVLYWDRQRLHQSPVMIKDAVRGASISSSAFPSCLILATRSTLMIGNVRGV 854
Query: 524 QKLHIRTVPLG-EAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQNTTSS 581
K+ I +V +G + PRRIA+ + + F V + +P+ + Q TTSS
Sbjct: 855 DKMQINSVRMGLDNPRRIAHHPTLRVFAVACIQ-----------TKPNRIGEPQETTSS 902
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 1006 NLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRII 1065
+L ++D TF + + E S+++ + + F +GT P E EP GRI+
Sbjct: 902 SLKLLDDTTFNRIASFACESDEEVTSVLTLSSSDVSSARFCVGTVQFKPGETEPSSGRIL 961
Query: 1066 IFHYDDG---KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLF--------EWTNEKE 1114
+F + G Q ++ + G Y + G + A++N++VR T K
Sbjct: 962 LFSLNTGPESSFQLVSSTPVSGCVYQLVSIQGMIAAAVNTSVRTAYVFIAFDPNMTIHKV 1021
Query: 1115 LRLECSHFNNIIALFLKVK--------------GDFILVGDLMRSLTLLQYKTMEGSFEE 1160
+ + NN + KV G ++VGD + S++ + K + + E
Sbjct: 1022 ILFKPEKLNNSTVVLTKVSEWNHNYSVTGLVVHGCMLIVGDAISSISFV--KVDDTTLES 1079
Query: 1161 ISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
I+RDY+P W S+E +D + +GA + NLF
Sbjct: 1080 IARDYSPLWPVSVEAMDGDGVIGANSDCNLF 1110
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 123/324 (37%), Gaps = 68/324 (20%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+L+VAK NR+E+ ++ GL + ++G+I +K K+ L ++T + ++
Sbjct: 27 HLIVAKVNRLEVFSLRSSGLHFECSLEIWGRIVSLKAIPSKDSKQSNLLVLTDHPDPKLI 86
Query: 750 ECR---GDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE 806
D N +L+K ++ DR +P+E +DP V + Y G K+I +
Sbjct: 87 PLTLVLDDTGNASLLSKETIDLHDRYARPAEFVTDVYVDPTGEVAVVSCYTGRLKVIEFK 146
Query: 807 KDNFELKASSIRMEELEIQDVQFLHGCQN-PTIICIHQDVNGRHVKTHEISLKEKEFTKT 865
I + EL I + L+ ++ T+ +H D GR ++ L +E + +
Sbjct: 147 NRERTGIPLDISIPELYILAMTLLYTTKDLYTLSILHYDHQGR-LQLLSRDLDLRELSAS 205
Query: 866 PWK-------QDNIEMEAS-LVIPV--------------PEPLGGAIIIG---------- 893
P N+ +++ +IPV LGG ++ G
Sbjct: 206 PSTLLFSTILSSNVPSDSTPFLIPVLPYVSHEENGENLYSSHLGGVVVAGCGNKLLFFEH 265
Query: 894 --QESILYHSGKSYVA--------------------------VAPQIIKS---STIVCYA 922
QE GK A + P++ S I +
Sbjct: 266 ASQERQEVRKGKQRRASKRMSSGDPAEAAKAKVKEKERETKKIKPKMSVDWPWSEITAWC 325
Query: 923 KVDANGERYLLGDLAGRLFMLLLE 946
D G R+++GD GRL ML +
Sbjct: 326 PADDQGRRFIIGDTFGRLAMLAFD 349
>gi|336369683|gb|EGN98024.1| hypothetical protein SERLA73DRAFT_109335 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382464|gb|EGO23614.1| hypothetical protein SERLADRAFT_449959 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1257
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 160/612 (26%), Positives = 255/612 (41%), Gaps = 121/612 (19%)
Query: 56 SGAEWGFHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVEL 115
+ +W + + + ++G + +L+GD GRL ML + E T
Sbjct: 309 ASVDWPWSEITAWCAVG---DELGRSFLIGDKYGRLAMLSIGINEGTTLTLVA------- 358
Query: 116 LGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN--------------------- 154
LGE S LTYL + V++VGS GDSQL+++N +P ++
Sbjct: 359 LGETSSATTLTYLTSQVLYVGSHFGDSQLLRINTTPVQSLESPTLPVPSDINTTTSSSLA 418
Query: 155 --------------------GTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFK 194
G+++SV+ES+ N+APIID +VD++ GQ +VTCSGG
Sbjct: 419 AKGKMEESSDRSGGCIINGRGSFLSVIESYKNIAPIIDAALVDVDNSGQHAVVTCSGGQN 478
Query: 195 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 253
GS+ I+RNG + A ++ + + IW L +D + +S T +L+ G
Sbjct: 479 TGSISIVRNGADFKAMANMEGIVDVTNIWPLRANYYDTVDTHVAVSTFKATHILSFDGRN 538
Query: 254 VEE---TEMGGFTSDQQTFYCGN---------------VDPRTVLQVTPSAAILISTESK 295
V GF + T N VD V+Q+T L+ +
Sbjct: 539 VASHVNPVSKGFITTSPTLVIANVLGRPKAPGQATNSYVDSSLVVQITSRGIALLEYAVE 598
Query: 296 ----ARVSS-WEPP-----NG-----KSISVVSCNKNQ-VLCATGCDVYYLEVHGSE-IK 338
ARV W P NG + I S N +Q VL + L +
Sbjct: 599 LGEYARVGDIWTPAKLSSTNGPGWENREIVAASANGSQFVLALNSGRIVLLNLDDRNCFD 658
Query: 339 QLAHRALE------YEVACLDISPLSNEETSSEPAK--AQLAAVGLWTDISARLLSLPS- 389
L R L+ E++ + PL+ P+K + V W+ +LS +
Sbjct: 659 CLNWRDLDGSSNYPTEISAISCVPLN-------PSKKFSMYIVVSFWSSNHIEILSANAA 711
Query: 390 --LEEVCKEPLGGEI--------IPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRL 439
+CK P+ + RS + E + YL+V LGDGS+ + L
Sbjct: 712 SHFASICKTPVLPSLPRSLLLFNFTRSDIPKQTEYNQYLIVGLGDGSVVSYEFKKE--EL 769
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN 499
+K ++G P L VFAC R ++++ +L S + L +V+ + LN
Sbjct: 770 HGQKIFSVGNVPVTLHPCDVEGRRTVFACGSRTSILFWDKERLHHSPLMLNEVSAVSRLN 829
Query: 500 AESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG-EAPRRIAYQESSQTFGV----IT- 553
+ S+ LAT + G++ + KL+IR++PLG + PRRI + S + + V IT
Sbjct: 830 TTVFDSSVILATSTGLVIGSVKNLDKLYIRSIPLGYDNPRRILHVPSLRAYAVGCISITP 889
Query: 554 TRIDIQEADGST 565
TRID E S+
Sbjct: 890 TRIDKAEYTSSS 901
Score = 93.6 bits (231), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 20/231 (8%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGE--YALSLISSKFGEDPNTYFVLGTAVVHPEENE 1058
E ++ + D TF L + P E AL ++S TY GT + +E E
Sbjct: 896 EYTSSSMQLFDHTTFARLGQFRCDPNEEITALGVVSVTLERSIGTYICAGT-YKYVDEVE 954
Query: 1059 PKQGRIIIFHYDDG-----KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK 1113
P QGR+++F +DG K+ E++G Y++ NG ++A+INS+V ++ +
Sbjct: 955 PSQGRLLVFDAEDGSLLREKITMAVSLEVRGCVYAVGSVNGMIIAAINSSVVVYRPEIDA 1014
Query: 1114 ELRLECSH-----FNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPN 1168
+L H +N + L +GD ILVGD + S++ L + +E + ++RDY
Sbjct: 1015 STQLLALHKITEWNHNYLVTNLVCRGDKILVGDAINSISFL--RMVESQIQCLARDYGSL 1072
Query: 1169 WMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGD 1219
W +E+LD +GA + YNLF A E R L+ G+ + +GD
Sbjct: 1073 WPVCVEMLDQSSIIGANSDYNLFTF----ALQETELRKSLERDGS-YYIGD 1118
Score = 48.1 bits (113), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 109/245 (44%), Gaps = 23/245 (9%)
Query: 683 ITQRTDLN-LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 741
+T +TD + LVVA NRI I +V P+GLR ++G++ +K + + ++T
Sbjct: 21 LTGKTDTDYLVVANLNRIHISSVQPDGLRHECRFEVWGRVGAIKAVPSENKQCMTILVLT 80
Query: 742 QRYNAMILECRGDIDN---LEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNG 798
+ ++ L+++ H ++ +R + +E ++DP R+ + Y G
Sbjct: 81 DHPDPELIFLSYQASQSGGLDLIYTKHLSLLERGARFAEFFNNVLVDPTGRLAVVSPYTG 140
Query: 799 LFKIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQN-PTIICIHQDVNGR-HVKTHEIS 856
KI+ + + + + EL + ++F+ + T+ +H D R + + +IS
Sbjct: 141 KLKIVLITPEGTYDTDFDVSIAELNLLALEFISSEPDLYTLAIMHIDHLKRLQLLSRDIS 200
Query: 857 LKEKEFTKTP----------WKQDNIEMEASLVIPVP-------EPLGGAIIIGQESILY 899
L E + + TP K I + ++ +P + +GG ++IG IL+
Sbjct: 201 LDEYQLSPTPSPALPSTPLSAKSFPIGDKPPSLVYIPPFIDDDEDFIGGMLVIGGTKILF 260
Query: 900 HSGKS 904
+ S
Sbjct: 261 YDTSS 265
>gi|302423344|ref|XP_003009502.1| DNA damage-binding protein 1b [Verticillium albo-atrum VaMs.102]
gi|261352648|gb|EEY15076.1| DNA damage-binding protein 1b [Verticillium albo-atrum VaMs.102]
Length = 1119
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 229/505 (45%), Gaps = 84/505 (16%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
RYLL D G L +L LE +DG V ++ +G+ S CL Y+ N ++F+GS G
Sbjct: 298 RYLLADDYGNLHLLTLE----VDGVI-VTGLSLKTIGKTSRASCLVYMGNEILFLGSHHG 352
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLER-----------QGQGQLVTC 189
DSQL L D + ++++ N+API+D ++DL GQ ++V
Sbjct: 353 DSQLFTL----DLCAQTIRLIQTIPNIAPILDFSIMDLGNAGDSGVGNAFSSGQARIVAG 408
Query: 190 SGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWAL-SIGSPKNLDNTLVLSFVGHTRVL 247
G GSLR IR+ +G+E+ +D + ++G+++L S GS K +TLV+SF+ TRV
Sbjct: 409 CGVHHNGSLRSIRSSVGLEDIGILDGIQDVRGLFSLKSYGSEKV--DTLVVSFITETRVF 466
Query: 248 TLSG-AEVEE-TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPN 305
VEE + G T DQ T + G++ LQ+T S+A+L+ +ES ++SW N
Sbjct: 467 KFDAYGSVEELADFQGLTLDQPTLFAGSLANGHTLQITASSALLLDSESSVTINSWTSSN 526
Query: 306 GKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSE 365
G SI S N+ +TG Y + + HR ET +
Sbjct: 527 GGSIVNASVNEK---ASTG--RRYWGATAARSRAFTHR-----------------ETFPD 564
Query: 366 PAKAQLAAVGLWTDISARLLSLPSLEEVC-KEPLG------GEIIPRSILMTCFEG---- 414
+ A+G W S VC +P G+ R+ + F G
Sbjct: 565 -----IGAIGFW-----------STGSVCGHQPRNTASTAWGKASNRTTTTSLFLGISLW 608
Query: 415 -HCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPT 473
C L + + F L A + +K+T+ ++ + + + C DR
Sbjct: 609 SSCTRLSS--QAPRYSFLLRTAKWFQSTSQKMTILSRRGKVSRWGA-GRQACMCCRDRVP 665
Query: 474 VIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPL 533
+ ++++S V H+ ++E +PD++ LATD +D ++ H+ + +
Sbjct: 666 L-----GRIIYSAATAEDVTHIAPFDSEGFPDAIFLATDKNVRIANVDTERRTHVNPLHI 720
Query: 534 GEAPRRIAYQESSQTFGVITTRIDI 558
GE RR+AY + + FG+ T R ++
Sbjct: 721 GETVRRVAYSPALKAFGIGTIRKEL 745
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
Query: 1041 PNTYFVLGTA-VVHPEENEPK--QGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKL 1096
P F++GT+ + P+ N+ +GRI++ D D I E+KGAC + KL
Sbjct: 797 PAERFIIGTSYLADPDVNDSGDVKGRILVLGVDSDRNPYLIVSHELKGACRCLGVMGDKL 856
Query: 1097 LASINSTVRLFEW----TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY- 1151
+A ++ TV ++++ T +L + + + L + G+ I V DLM+S+TL+++
Sbjct: 857 VAGLSKTVVVYDYIEDSTTSGKLEKLTTFRPSTFPVDLDISGNMIGVADLMQSMTLVEFV 916
Query: 1152 ---KTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHL 1208
+ E +R + W T++ L +E +L A+ NL I ++ A ++ D+ +
Sbjct: 917 PAKDGRKAKLIERARHFEYIWATAVCSLGEESWLEADAQGNLMILERQPDAPTEHDQKQM 976
Query: 1209 QEVGTVHL 1216
+ +HL
Sbjct: 977 RTTSEMHL 984
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 49/296 (16%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILE 750
LV AK NR+EI T EGL + + G I +++ R + D+LF+ T ++
Sbjct: 28 LVTAKVNRLEISRPTSEGLTLLSSSVVCGTITLLQTLRPKASETDILFVGTDLFH--YFT 85
Query: 751 CRGDIDNLEILTKAHGNVSDRIGKP----SENGIIAIIDPEARVIGLRLYNGLFKIIPL- 805
R D +++T+ V I +P +++ ++DP R + + L+ G+ I+ L
Sbjct: 86 ARWDPTQGKLVTE---QVIQDIAEPHMREAQSQDKCLVDPAGRFVAMHLWEGVMNIMQLG 142
Query: 806 --EKDNFELKA--SSIRMEELEIQDVQFLHG-CQNPTIICIHQ---DVNGRHVKTHEISL 857
+ N L + +R+ EL ++ F+ +PTI ++Q D H+ + L
Sbjct: 143 TRKGANLRLDKDWAQVRLSELFMKASTFVPTETGHPTIAFLYQNSIDREDAHLAVYR--L 200
Query: 858 KEKEFTKT----PWKQDNIEME-----ASLVIPV------------------PEPLGGAI 890
E T P K +E+E A +IPV LGG I
Sbjct: 201 MEDGNTNVSKFDPLKNRELELEIPDPFARTLIPVSIVESDVKRYHRRDTTNASAQLGGLI 260
Query: 891 IIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLE 946
+ G+ ++Y + V ++ + + V +AK D RYLL D G L +L LE
Sbjct: 261 VAGETMLIYVDTLTKVKISKALDEPRIFVSWAKYDVT--RYLLADDYGNLHLLTLE 314
>gi|390603312|gb|EIN12704.1| hypothetical protein PUNSTDRAFT_97523 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1268
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 131/462 (28%), Positives = 207/462 (44%), Gaps = 64/462 (13%)
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
D+Q + + +G+Y+ V+ ++ NLAP+ D ++++ + GQ Q+VTCSGG GSL++
Sbjct: 456 DAQSGRKGKVVRSDGSYLEVLATYQNLAPVTDALLMNADGSGQPQIVTCSGGANAGSLKV 515
Query: 201 IRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
+R G + A ++ LPG +W + N D+ +V S + T+VL L + +
Sbjct: 516 VRKGADFKTAAVVESLPGTVSVWPVRKRYYDNTDSYIVASTLRCTQVLLLEEHDTVNPLV 575
Query: 260 GG---FTSDQQTFYCGNV-------------DPRTVLQVTPSAAILISTESKARV----- 298
F + T N+ D V+QVTPS L+ + V
Sbjct: 576 AASTDFATSGPTISVANILRRRLVNGKSEYEDSSLVVQVTPSKMRLLEHDMIGPVEFRLV 635
Query: 299 SSWEP--PNGKSISVVSCNKNQV--------LCATGCDVYYLEVHGS-EIKQLAHRALEY 347
+W+P P + I S N Q+ LC V+ L + +++ H + +
Sbjct: 636 DTWKPSGPGPQEIVTASINPTQIALGLRGGRLC-----VFRLAPNDHFDLRFTQHFSNDI 690
Query: 348 E-VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS--LE-EVCKEPLGGEII 403
V+CL ++P + + AVG W + +L LE E+ +PL +
Sbjct: 691 SAVSCLPLNPGN--------LISAFIAVGFWGSNNVMILCQKGNILELELQTDPLPA--L 740
Query: 404 PRSILMTCF---------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVL 454
PRS+L+ F H +LL+ L DGS+ ++ A L DKK V LG P L
Sbjct: 741 PRSLLLYNFGTSFGKKDPNYHAHLLIGLADGSLVSYAY--ARKELKDKKVVPLGASPVSL 798
Query: 455 KTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST 514
+ +F C R V+Y +L + L+ V C LN+ S+ S L T S
Sbjct: 799 VPCEANGKKAIFCCGTRAAVVYWDRDRLQNAPALLKNVVTACPLNSTSFEQSTILVTGSG 858
Query: 515 FTFGTIDEIQKLHIRTVPLG-EAPRRIAYQESSQTFGVITTR 555
FT G + LH+R+VPLG + P+RI Y S GV R
Sbjct: 859 FTIGHFGNVAGLHVRSVPLGVDVPKRITYNNESHLLGVACIR 900
Score = 70.5 bits (171), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 11/211 (5%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFG--EDPNTYFVLGTA-VVHPEENEPKQGRII 1065
++D +F L L E S + G E ++F +GTA ++ E +GR++
Sbjct: 919 LLDDTSFGELDRFDLEADEDITSAVVLSLGTAEAYTSHFCIGTADFTSDDQLEVSKGRLV 978
Query: 1066 IFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW-----TNEKELRLECS 1120
+F L +A ++ G Y++ G + A++NS V ++ T + ++ +
Sbjct: 979 VFDPSTKVLSPVATLDVNGCVYALASIQGLVAAAVNSAVIVYRLETDGPTFSSKRLVQLA 1038
Query: 1121 HFN-NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE 1179
++N N L +G I VGD + S+++L+ + + ++RDY P W +IE +
Sbjct: 1039 NWNHNYFVTNLVTRGSRIFVGDAISSVSILELTGQ--ALQTVARDYGPLWPVAIESTGPD 1096
Query: 1180 LFLGAENSYNLFICQKDSAATSDEDRTHLQE 1210
+GA+ +NLF + + HL E
Sbjct: 1097 SVIGADGEFNLFTFKLSEGKLERDGSYHLGE 1127
Score = 42.4 bits (98), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 56 SGAEWGFHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVEL 115
S EW + + + + G L+GD GR+ ML ++ + G P
Sbjct: 321 STVEWPWSEITAWCPVTRTCRG----LLIGDAYGRMSMLSIDP---IRGNGLTLLP---- 369
Query: 116 LGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSP 151
LGE S P + YL + V ++GS +GDSQL++++ +P
Sbjct: 370 LGETSPPTSIAYLTSQVFYLGSHMGDSQLLRISPTP 405
Score = 41.2 bits (95), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 109/245 (44%), Gaps = 37/245 (15%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYN---- 745
+LVVAK +++E+ ++ PEGLR ++G+I ++ +++ L ++T +
Sbjct: 29 HLVVAKPDKLEVFSLQPEGLRLETSTEIWGRILRIRELPVQGERRSNLLVLTDHPDPKLI 88
Query: 746 AMILECRGDIDNLEILTKAHGNVS----DRIGKPSENGIIAIIDPEARVIGLRLYNGLFK 801
A+ LE GD L + + G S D+ + +E + P VI + Y G
Sbjct: 89 ALELEDEGDTPRLVEIKTSSGTKSISLHDKNSRQAEFLTDVWVHPSGSVILVSCYAGRLT 148
Query: 802 IIPLEKDNFELKASSIRMEELEIQDVQFLHGC----QNP--TIICI------HQ---DVN 846
++ + +D + + ++E+ + + FL ++P +I I HQ +
Sbjct: 149 VVRV-RDGVLQQEFPVSLQEINLLALCFLPSPVGDDEDPETEVISIGIVYLDHQSRVQLL 207
Query: 847 GRHVKTHEISLKEKEF---TKTPWKQDNIEMEAS--LVIPVPEPL--------GGAIIIG 893
R ++ E+S++ T P D++ + + ++P+P L GG +++G
Sbjct: 208 ARDLEAFELSVQPSPALPPTPLPISADDLSLNGTSLSLVPIPTTLADIDANFRGGVLVLG 267
Query: 894 QESIL 898
++
Sbjct: 268 GRKVM 272
>gi|170090007|ref|XP_001876226.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649486|gb|EDR13728.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1275
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 157/608 (25%), Positives = 260/608 (42%), Gaps = 125/608 (20%)
Query: 56 SGAEWGFHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVEL 115
S EW F L + ++ + RYL+GD GRL +L L+K +++ G +
Sbjct: 316 SSIEWPFSELAAWCAI----DKAPYRYLIGDSFGRLSILSLDKVQRI-GLVLIP------ 364
Query: 116 LGEISIPECLTYLDNGVVF----------------------------------------- 134
GE S P LTYL N +V+
Sbjct: 365 FGEASSPTSLTYLTNQLVYVGSHSGDSQLIRLSPLPISSSESPTLPIPPEIKTVSPNLLE 424
Query: 135 -VGSRLGDSQLVKLNRSP---------------DENGTYVSVMESFTNLAPIIDMVVVDL 178
+G R G S+ V + + +G+++ V+ S+ NLAPI+D ++VD
Sbjct: 425 ALGHRKGKSKSVAEDHMDEDHDDEDDASQGYIVETHGSFIEVLSSYKNLAPILDAILVDT 484
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLV 237
+ GQ +VTCSG GS+ I+RNG +E + L G+ G+W++ D ++
Sbjct: 485 DGSGQQHIVTCSGARSTGSINIVRNGADFQEIGHVPGLTGVVGVWSVRTMLEDTTDRYIL 544
Query: 238 LSFVGHTRVLTL--SGAE-----VEETEMGGFTSDQQTFYCGNVDPRT------------ 278
+S T + + SG+ V+ T + + + T N+ R+
Sbjct: 545 VSTNRSTHLFEIDDSGSTSTITPVDSTTIRSLVTTEATLAFSNLARRSSVGGSSVYKNSP 604
Query: 279 -VLQVTPSAAILISTESK-------ARVS--SWEPPNGKSISVVSCNKNQ---VLCATGC 325
+QV S A L+ + + A+ S S P + + VV+ + N V+ A+G
Sbjct: 605 LAVQVVASGARLLKSNTAFGGYELVAQYSMLSSVPYGQRPLEVVAASANASQLVMAASGG 664
Query: 326 DVYYLE----VHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDIS 381
+ V E+ R E++ + +PL+ + +S V W +
Sbjct: 665 KLTLWRLGENVDALEMIAGCQRKEGPEISAVSCAPLNTTKRTSP-----TIIVSYWQSNT 719
Query: 382 ARLL--SLPSLEEVCKEPLGGEIIPRSILMTCF---------EGHCYLLVALGDGSMFYF 430
+L SL LE V K P ++ RS+L+ F + H YLL L +G++ F
Sbjct: 720 IEILQVSLKGLESVYKSPTLPALV-RSVLLYNFGSDTNPKGTDHHPYLLAGLANGTVASF 778
Query: 431 SLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLR 490
+LTDKK + LG P L + VFA +R TV+ N +LV S + L+
Sbjct: 779 RWK--DKQLTDKKIIPLGHAPVNLMPCQVEGRHAVFAAGNRATVLSFENKRLVHSPIMLK 836
Query: 491 QVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG-EAPRRIAYQESSQTF 549
++ LN ++ SL L+T + G + + KLHIR++P G + PR+IA++ S + F
Sbjct: 837 DISSAARLNTPTFASSLILSTPTGLFIGRVQGLGKLHIRSIPFGFDNPRKIAHEPSIKAF 896
Query: 550 GVITTRID 557
GV T ++
Sbjct: 897 GVAFTTME 904
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 20/229 (8%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLIS--SKFGEDPNTYFVLGTAVVHPEENE 1058
E+ + ++D +F L P E +++S K P +F +GT V E E
Sbjct: 912 EISRSSFKLLDDTSFANLCQFNCDPDEETTAVVSFSQKIAGKPMPFFCVGTYVYKAGEVE 971
Query: 1059 PKQGRIIIFHYDDG-----KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK 1113
P GR++IF L +A ++ G Y++ +++A++NS+V LF +
Sbjct: 972 PSAGRLMIFTATTSTSSNLALSLMASTKVPGCVYALTVVQNQIVAAVNSSVMLFRLESSS 1031
Query: 1114 E------LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNP 1167
+ +++ H N ++ L D ++VGD S++LLQ + +RDY P
Sbjct: 1032 DSLSPSLIKVSEWHHNYLVT-SLGSYADRVVVGDQPSSISLLQ--VTQSKLISQARDYGP 1088
Query: 1168 NWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
W +E LD+ +GA +S NLF + A R+ L+ G H+
Sbjct: 1089 LWPVCVEALDERHIIGANDSLNLFTFSLEKAM----GRSRLERDGCYHV 1133
Score = 49.7 bits (117), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 134/338 (39%), Gaps = 75/338 (22%)
Query: 686 RTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYN 745
R +LVVAK NR++++++ P+GL + ++GK+ +K + + ++ +
Sbjct: 24 RDTEHLVVAKLNRLDVYSLKPQGLHHECGVEIWGKVLTVKAIPQIGSARSTIVLMIAHPD 83
Query: 746 AMI-----LECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLF 800
+ ++ +GD LE+ K ++ +RI +P+E ++ P ++ + Y+G
Sbjct: 84 PELVFFTYIDRQGDNPALEVSKKL--SLFERIARPAEFFNDVLVHPSGKLALVSCYSGKL 141
Query: 801 KIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICI-HQDVNGR--------HVK 851
KII L+ ++ K +++ E+ + V FL + I + D R V
Sbjct: 142 KIIRLKCGTYD-KDYDVQLPEVNVFSVTFLSSFNGEYAVAILYLDYQERVQLVARDILVN 200
Query: 852 THEISLKEKEFT---KTPWKQDNI----EMEASLVIPVPEP-----------LGGAIIIG 893
+I++ E+ T TP + E LV PE LGG +++G
Sbjct: 201 GDDITVSEEPSTLLHPTPISNKTLPFPTESVPQLVSVPPEELDEDTDVDDAFLGGVLVVG 260
Query: 894 QESILY----------------------HSGKSYVAVAPQIIKS---------------- 915
IL S K +A K
Sbjct: 261 GRQILLFELSSEKSQEKQRGKRKRLESRKSSKDVTEIAKAREKEKEREGRRRKPKSSIEW 320
Query: 916 --STIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKM 951
S + + +D RYL+GD GRL +L L+K +++
Sbjct: 321 PFSELAAWCAIDKAPYRYLIGDSFGRLSILSLDKVQRI 358
>gi|400600376|gb|EJP68050.1| CPSF A subunit region [Beauveria bassiana ARSEF 2860]
Length = 1174
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 137/524 (26%), Positives = 251/524 (47%), Gaps = 56/524 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGT----FSVKEPKVELLGE-ISIPECLTYLDNGVVFVG 136
Y L D GRL ++ L+ + G +V+ K+ E IS L Y+ +G++F+
Sbjct: 303 YFLADDYGRLDLMTLKTYTEPKGVIVTGMTVEPLKISDSRELISRASNLVYMGDGMLFLA 362
Query: 137 SRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ------------GQG 184
S G+SQL+++ D + + +++S +N PI+D ++D+ + GQ
Sbjct: 363 SHHGNSQLLRI----DLDSRTLYIIKSLSNNGPILDFAIMDMGNRDGDNHQGNVFSSGQT 418
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWAL-SIGSPKNLDNTLVLSFVG 242
++V G +++GSLR IR+G+G+E+ +D L +G++ + S GS L + LV SFV
Sbjct: 419 RIVAGCGAYRDGSLRSIRSGVGLEDCVILDELENTRGLFMIKSRGS--RLVDVLVASFVT 476
Query: 243 HTRVLTLSGAEVEET-EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSW 301
TR+ + EVEE + G + +T + +LQVT + + + + + SW
Sbjct: 477 ETRIFLMLEDEVEELYDWCGLNLEVETLIAATLPGYDLLQVTRTDVAIFHFDDRPEIDSW 536
Query: 302 EPPNGKSISVVSCNKNQVLCATGCDVYYLE-VHGSEIKQL-AHRALEYEVACLD----IS 355
K+ S V+ ++ ++ A+ D + L + G+ I L + LE AC+
Sbjct: 537 V----KTKSWVNESEGEITSASYNDKWVLLCIDGTTIVSLNIEKNLE---ACVQRYQGTD 589
Query: 356 PLSNEETS---SEPAKAQLAAVGLWTDISARLLSLPSLE----EVCKEPLGGEIIPRSIL 408
P +++ S + P VG W ++ L +L E ++ + +PR I
Sbjct: 590 PSQSDQVSCLHASPDVMDFGVVGWWNSGKITIVDLATLNAKHGENLQQTMDAASVPRDIA 649
Query: 409 MTCFE----GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-----RS 459
+ LLVAL DG++ F + + L+ KK VTLG+ P L S
Sbjct: 650 LVQLHPPDISGPTLLVALEDGTVTSFDVSVENLELSGKKTVTLGSSPARLHILPEPDDTS 709
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
T+++FA ++ ++IYSS +LV+S + ++ +P + ++TD
Sbjct: 710 DGTSSIFATTEHSSLIYSSEGRLVYSATTADNATCVVPFDSYGFPHCILVSTDKNVRICR 769
Query: 520 IDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID-IQEAD 562
+D+ + H++++P+ E RR+AY ++ F + + D IQ A+
Sbjct: 770 VDKERLTHVKSLPVHETVRRVAYAPGAKAFALGCIKKDLIQNAE 813
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 143/314 (45%), Gaps = 43/314 (13%)
Query: 665 AVMKFFRGPTDKKDLLFIITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM 724
AV FR P D +DL+ + ++K NR+EI VT EG+ + ++G I ++
Sbjct: 16 AVRLQFRSP-DHEDLIVAVP--------ISKANRLEIWRVTQEGMTCLHTKVVHGTICML 66
Query: 725 KFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAII 784
+ R DLLF+ T+R + + + + + ++++ + S++ ++
Sbjct: 67 QRLRPRDATTDLLFVGTERLQYFNVSWNPKSNEMVLTNETIHDMAEPYMRESQSQNKCLV 126
Query: 785 DPEARVIGLRLYNGLFKIIPL---EKDNFELKA-SSIRMEELEIQDVQFLHG-CQNPTII 839
DP A+ + + L+ G+ I L + + +LK IR+ EL ++D F+H +P I
Sbjct: 127 DPTAKYMVMHLWEGVLNIFRLPNTPRASKKLKKMEQIRLTELWMKDSAFIHSRTGHPRIA 186
Query: 840 CIHQ---DVNGRHVKTHEISLKEK--EFTK-TPWKQDNIEM-----EASLVIPVP----- 883
+++ D V + ++ +K + +K P K ++ AS++IPVP
Sbjct: 187 FLYKTQLDQEEARVAVYRLTTDDKGTDVSKFDPHKDRELDQVIADPYASMLIPVPVAEEK 246
Query: 884 -----------EPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYL 932
LGG +++G+ + Y +Y +V+ + + V +A D Y
Sbjct: 247 RYHVRNTEGTRAHLGGLLVVGETLLTYFDSLTYSSVSSALDEPKIYVAWAMYDDT--HYF 304
Query: 933 LGDLAGRLFMLLLE 946
L D GRL ++ L+
Sbjct: 305 LADDYGRLDLMTLK 318
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 22/264 (8%)
Query: 968 HCKG-PVVEMSSLSYIKPGSTKQSTANQPADF--NMEVEVHNLLIIDQNTFEILHAHQLF 1024
H K PV E PG+ + D N EV ++ ++D+ F+ L
Sbjct: 777 HVKSLPVHETVRRVAYAPGAKAFALGCIKKDLIQNAEVITSSVKLVDEIMFQELGTPLPL 836
Query: 1025 PGEYALSLISSKFGE---DPN----TYFVLGTAVVHPEE---NEPKQGRIIIFHYDDGK- 1073
L ++ S DP FV+GT+ V+ E +GRI++ D+ +
Sbjct: 837 AASSTLEMVESVIRAELPDPTGALVERFVVGTSFVNDAEVGEAGETRGRILVLGVDEKRQ 896
Query: 1074 LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKE----LRLECSHFNNIIALF 1129
L I +KGAC + + ++A + TV ++ +T E L+ ++ +
Sbjct: 897 LYTIVSHNLKGACRCLGILDEYIVACLAKTVVVYSYTEENSTEGYLQKLAAYRPASFPVA 956
Query: 1130 LKVKGDFILVGDLMRSLTLLQYKTME----GSFEEISRDYNPNWMTSIEILDDELFLGAE 1185
L + G+ I V D+M+SL+L+++ + G EE +R + W TS+ L E +L +
Sbjct: 957 LDISGNMIGVADIMQSLSLVEFTPPKDGEPGKLEEKARHFQSAWATSVCHLGGERWLETD 1016
Query: 1186 NSYNLFICQKDSAATSDEDRTHLQ 1209
N+ + ++ A ++ DR+ L+
Sbjct: 1017 AQGNIIVLARNPDAPTEHDRSRLE 1040
>gi|346321204|gb|EGX90804.1| DNA damage-binding protein 1 [Cordyceps militaris CM01]
Length = 1160
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/512 (26%), Positives = 237/512 (46%), Gaps = 50/512 (9%)
Query: 75 WNGWSE-RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELL------GEISIPECLTY 127
W + E Y L D GRL +L L+ + G V VE L S L Y
Sbjct: 291 WAMYDETHYFLADDYGRLDLLTLQTHSEQTGVV-VNRMTVEPLKFPDSKNLTSRASSLVY 349
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ------ 181
+ G++ V S GDSQL+++ D + + ++ +N PI+D ++D+ +
Sbjct: 350 MGGGMLVVASHHGDSQLLQI----DIDSRTMHPIKLLSNNGPILDFAIMDMGNRDGDNLQ 405
Query: 182 ------GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDN 234
GQ ++V G +++GSLR IR+G+G+E+ ++ + + ++ + K +D
Sbjct: 406 GNLFSSGQARIVAGCGAYRDGSLRSIRSGVGLEDLGILEEIKNTRRLFTIKSRRSKKVD- 464
Query: 235 TLVLSFVGHTRVLTLSGAEVEETEMGGFTS---DQQTFYCGNVDPRTVLQVTPSAAILIS 291
TLV ++ TRV L GA+ + E+ F ++ N+ +LQVT +
Sbjct: 465 TLVACYILDTRVF-LFGADGDIQEVNNFPGLNLRVESLLVVNLPNGRLLQVTRMDVTIKD 523
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVL-CATGCDVYYLEVHGSEIKQLAHRALEYEVA 350
+A+ W P G +I+ SCN +L C G + L + K L +Y+ A
Sbjct: 524 PNEQAKALRWVAP-GANITSASCNGKWILLCVDGSKIVSLNID----KNLEACVQQYQGA 578
Query: 351 CLDISPLSNEETSSEPAKA--QLAAVGLWTDISARLLSLPSLE----EVCKEPLGGEIIP 404
D S SN+ + + +G W ++ L +L E ++ +P
Sbjct: 579 --DDSNQSNQVSCLHASTTFQDYGVIGWWYPGRITIIDLATLSAKHVETLQQTTDAASVP 636
Query: 405 RSI-LMTCFEGHC---YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RS 459
R I L+ H LLVAL DG++ F++ L+ KK+VTLG+ P L +
Sbjct: 637 RDISLVQLHPRHASGPTLLVALEDGTVITFNVS-EDLTLSGKKRVTLGSSPACLHVLPEA 695
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
T+ +FA ++ ++IYSS ++++S + ++E++P+S+ L+TD
Sbjct: 696 DGTSKIFATTENASLIYSSEGRIIYSATTADDATCVVPFDSEAFPNSILLSTDKHVRLCH 755
Query: 520 IDEIQKLHIRTVPLGEAPRRIAYQESSQTFGV 551
ID+ + H++++P+ E RR+AY + F +
Sbjct: 756 IDKERLTHVKSLPVYETVRRVAYAPGVKAFAL 787
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 143/329 (43%), Gaps = 36/329 (10%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+L+VAK NR+EI VT E + + ++G I +++ R DLLF+ T+R +
Sbjct: 28 DLIVAKANRLEIWRVTREDMTCLHTKVVHGTICMLQRLRPKDANTDLLFVGTERLQYFNV 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE--- 806
+ +E+ + + ++ + S++ ++DP A+ + + L+ G+ + L
Sbjct: 88 SWNSQRNEMELTHETIHDTAEPYMRESQSQNKCLVDPTAKYMVMHLWEGVLNVFRLPARR 147
Query: 807 --KDNFELKASSIRMEELEIQDVQFLHG-CQNPTIICIHQ---DVNGRHVKTHEISLKEK 860
D E + IR+ EL ++D F+H +P I +++ D V + ++ +K
Sbjct: 148 GVSDKLE-EMDQIRLTELWMKDSAFIHSRTGHPRIAFLYKTQLDEEEARVAVYRLTKDDK 206
Query: 861 --EFTK-TPWKQDNIEME-----ASLVIPVP----------------EPLGGAIIIGQES 896
+ +K P K ++ AS++IPVP LGG +++G+
Sbjct: 207 GSDVSKFDPHKDRELDQVIADPCASMLIPVPVAEEKRYHVRNNEGTRAHLGGLLVVGETL 266
Query: 897 ILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFS 956
+ Y +Y +V+ + + V +A D Y L D GRL +L L+ + G
Sbjct: 267 LTYFDSLTYSSVSSVLDEPKIYVAWAMYDET--HYFLADDYGRLDLLTLQTHSEQTGVVV 324
Query: 957 VKEPKVELLGEHCKGPVVEMSSLSYIKPG 985
+ L K SSL Y+ G
Sbjct: 325 NRMTVEPLKFPDSKNLTSRASSLVYMGGG 353
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 19/230 (8%)
Query: 999 NMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF-GEDPN------TYFVLGTAV 1051
N EV ++ ++D+ F+ L A L ++ S E P+ F++GT+
Sbjct: 797 NEEVITSSVKLVDEIIFQELGAPLQLNASSTLEMVESVIRAELPDHTGALVERFIVGTSF 856
Query: 1052 VHPE---ENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLF 1107
+ E +GRI++ D+ + L I +KGAC + + ++A ++ TV ++
Sbjct: 857 ITDADVGEASETRGRILVLGVDEERQLYTIVTHNLKGACRCLSVLDEYIVAGLSKTVVVY 916
Query: 1108 EWTNEKE----LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTME----GSFE 1159
+T E L+ ++ + L V G+ I VGDLM+SL+L+++ + +
Sbjct: 917 RYTEETSTEGSLQKLAAYRPASFPVALDVSGNMIGVGDLMQSLSLVEFTPPKDGEPAKLQ 976
Query: 1160 EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
E +R + W TS+ LD E +L + N+ + ++ A +++DR L+
Sbjct: 977 EKARHFQSAWATSVCHLDGERWLETDAQGNIMVLARNPEAPTEQDRGRLE 1026
>gi|449664009|ref|XP_004205855.1| PREDICTED: splicing factor 3B subunit 3-like [Hydra magnipapillata]
Length = 1213
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 132/519 (25%), Positives = 226/519 (43%), Gaps = 62/519 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G +F + LE EE M V E +V+ I + L L G +F S G+
Sbjct: 291 FLVQSEQGDIFKVTLETEEDM-----VTEIRVKYFDTIPVASALCVLKTGFLFAASEFGN 345
Query: 142 SQLVKLNR--SPDENGTYVSVM-------ESF----------------TNLAPIIDMVVV 176
L ++ DE + S+M E+F +LAPI+ V
Sbjct: 346 HALYQITHLGDDDEEPEFSSLMATELDEGETFFFHARDLQNLVLVDEMESLAPIMHCQVA 405
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNT 235
DL + QL G SLR++R+G+ + E A +LPG +W + S D
Sbjct: 406 DLANEDTPQLYAACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNSVWTVKKNSTDEQDAY 465
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+V+SFV T VL++ G VEE GF T C + +LQ+ P I S
Sbjct: 466 IVVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLSCSLLGEDALLQIYPDGIRHI--RSD 522
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACL 352
RV+ W+ P K+I + N+ Q++ A TG ++ Y E+ S ++ + R + +V C+
Sbjct: 523 RRVNEWKTPGKKNIIQCAVNERQIVIALTGNELVYFELDQSGQLNEYTERKEMSADVVCM 582
Query: 353 DISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF 412
+ P+ E +++ AVGL D + R++SL + C EPL + +P + C
Sbjct: 583 ALGPVHAGEQ-----RSRFLAVGL-IDNTVRIISLDPND--CLEPLSMQALPAAGESLCI 634
Query: 413 ----------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKT 456
G +L + L +G + LD +G L+D + LG++P L
Sbjct: 635 IEMGGTEVGEKGTAGNAGGLFLNIGLANGVLLRTVLDSVTGDLSDTRIRYLGSKPVKLFN 694
Query: 457 FRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFT 516
++ ++V A S R + Y+ + + ++ + + S +E P+ + + +T
Sbjct: 695 VKTYGCSSVLAMSSRTWLSYTYQSRFHLTPLSYESLEYASSFASEQCPEGIVAISSNTLR 754
Query: 517 FGTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITT 554
++++ + + T PL PR+ S T +I T
Sbjct: 755 ILALEKLGAVFNQVTTPLDFTPRKFVVDHKSHTLIMIET 793
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVL-GTA---VVHPEENEPKQGRI 1064
I+D E H QL E A S+ ++F P FV+ G A +++P ++
Sbjct: 861 IMDPIRSETHHEIQLEQDEAAFSVCLTEFANQPGDRFVIVGCATKMILNPHSSQSCSIHT 920
Query: 1065 I-IFHYDDGKLQ-----QIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLE 1118
++ D G++Q + +I GA +C F G+LL + +R+++ +K LR +
Sbjct: 921 YQLYQNDRGRMQLELLHKTPVDDIPGA---LCSFQGRLLVGVGRILRIYDLGKKKLLR-K 976
Query: 1119 CSHFNNIIALFL---KVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
C N ++ F+ G I+V D+ S L+YK + + D N ++T +
Sbjct: 977 CE--NKKVSTFITGIDTIGYRIMVHDIQDSFHFLKYKRKDNQLVLFADDVNKRFLTCGCL 1034
Query: 1176 LDDELFLGAENSYNLFICQ 1194
+D + GA+ N+F +
Sbjct: 1035 VDYDTMAGADKFGNIFFVR 1053
>gi|299743623|ref|XP_001835883.2| hypothetical protein CC1G_02971 [Coprinopsis cinerea okayama7#130]
gi|298405741|gb|EAU85948.2| hypothetical protein CC1G_02971 [Coprinopsis cinerea okayama7#130]
Length = 1282
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 154/591 (26%), Positives = 240/591 (40%), Gaps = 148/591 (25%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELL--GEISIPECLTYLDNGVVFVGSR 138
R+L+ D+ G L +L G +VK + LL G S P LTYL N V+FVGS
Sbjct: 329 RFLISDVCGGLSLL---------GVDNVKTNGMTLLPLGMTSPPTSLTYLTNQVIFVGSH 379
Query: 139 LGDSQLVKLNRSP-DENGTYVSVM------------------------------------ 161
LGDSQLV+++ +P +++G + ++
Sbjct: 380 LGDSQLVQVSSTPNNQDGPMLDILPEIKTVARNMPAPSRDKGKGRASDEAMDVDDEDDDD 439
Query: 162 -----------------ESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNG 204
SF N+API D VVVD+E GQ ++VTCSGG+ GSL I+R+
Sbjct: 440 ISRGRIIKPEGSHLHVLHSFKNIAPINDAVVVDVEGNGQNEIVTCSGGYTSGSLNIVRS- 498
Query: 205 IGIEEHACIDLPG---IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL-----------S 250
G E H LPG + +W + N ++T+ V T TL +
Sbjct: 499 -GAEYHEAATLPGVCNVNSLWTIK----SNFEDTIHSHIVASTHDRTLLFRIKDDGRNTT 553
Query: 251 GAEVEETEMGGFTSDQQTFYCGNVDPRT-------------VLQVTPSAAILISTE---- 293
++ T F +DQ T NV R V+QVT + L+ +
Sbjct: 554 FTLLDSTAARDFITDQPTVALANVRKRVSVERKSVYRDCNWVVQVTDNVVNLLEHDVVLG 613
Query: 294 SKARVSSWEPPNG---KSISVVSC--NKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYE 348
+ +SW PP+ + + +V+ N QV+ A + H E A + +
Sbjct: 614 GFNKRASWSPPSSVAPRPVEIVAADINPTQVVLALSGGRLVVLRHNEE--GTAFELVAEK 671
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDIS----------------------ARLLS 386
+IS +S + ++ ++ VG W ++ + S
Sbjct: 672 NTLREISAVSCQAADTKTPYTKVFLVGYWEQVAEADTDRDTVVEILELERRSNPGSGTPS 731
Query: 387 LPSLEEVCKEPLGGEIIPRSILMTCF-------------EGHCYLLVALGDGSMFYFSLD 433
L L +V K+ + +PRS+L+ F +L L DGS+ +F +
Sbjct: 732 LTCLVKVSKKYVPA--LPRSLLLYSFGVPDSEPTNLKPNSQPTHLFCGLADGSVAHFVVW 789
Query: 434 PASG-RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQV 492
G +TD K V LGT P V A +R ++ ++ S V L+ +
Sbjct: 790 KDGGLNVTDSKIVPLGTTPVKFSACVVDGKRCVLAVGNRASIFSYERKRMAHSPVMLKDL 849
Query: 493 NHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG-EAPRRIAY 542
N LN ++P S LA T G++ EI K+ IRT+PLG + P+RI +
Sbjct: 850 NAAYPLNTHTFPTSFILANHQGLTIGSVKEIGKISIRTIPLGYDNPQRIVH 900
Score = 45.4 bits (106), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 26/202 (12%)
Query: 1006 NLLIIDQNTFEILHAHQLFPGEY--ALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGR 1063
+L ++D TF+ L + E AL+ + + V+GT+ Q R
Sbjct: 928 SLKLLDDLTFKQLSQYNCDSDEVISALTTFTEEISGKETPLLVVGTS-------SSSQAR 980
Query: 1064 IIIFHYDDGKLQQ----IAEKEIKGA-CYSMCEFNGKLLASINSTVRLFEWTNEK----- 1113
+++F + Q I E+ G S+C +LA+++ V +++
Sbjct: 981 LLVFSVASSEACQELTLITSLEVNGQHVNSLCVMGNYVLAAVDCAVFSYKFKGSSDDTDS 1040
Query: 1114 ---ELRLECSHFN-NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNW 1169
EL+ E +N N I L + +++GD+ S++L+ +G F I+RDY P +
Sbjct: 1041 QSSELK-EVGEWNHNYIVRSLGSFNNSLVIGDIASSVSLVNVN--KGQFTPIARDYAPLF 1097
Query: 1170 MTSIEILDDELFLGAENSYNLF 1191
++E L + +G ++ NLF
Sbjct: 1098 PYALEALSENALIGGNDASNLF 1119
>gi|449540702|gb|EMD31691.1| hypothetical protein CERSUDRAFT_109269 [Ceriporiopsis subvermispora
B]
Length = 1265
Score = 146 bits (368), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 198/447 (44%), Gaps = 54/447 (12%)
Query: 155 GTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID 214
G ++ V+++F N+API+D V+ DL+ GQ Q++TCSGG G+L+++R G +E A ++
Sbjct: 451 GQFIEVLDTFQNMAPIMDAVLADLDDSGQSQIITCSGGRNSGALKVVRAGADFQELARVN 510
Query: 215 -LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEV---EETEMGGFTSDQQTFY 270
+ GI +W + S + D+ LV S T V ++V ++ F + T
Sbjct: 511 GITGITSLWPVRSRSEHSTDSHLVASTETETYVFKFDSSDVITQLDSSADEFITTAPTLA 570
Query: 271 CGN-----------------VDPRTVLQVTPSAAILISTESKARVSS-----WEPPNGKS 308
N VD V+QVTP L+ + + S W+P + +
Sbjct: 571 VANIPRRVSTNASGRVSSSYVDSSLVIQVTPEKITLLEYGAALGLFSLVGEGWDPKSQGA 630
Query: 309 IS----VVSCNKNQVLCATGCD---VYYLEVHGSEIKQLAHRALEYE---VACLDISPLS 358
I +V+ + N G D V L + + Q+ R+ ++ LD+S +S
Sbjct: 631 IGGRRRIVAADVNASQIVVGLDGGKVCLLNLADNSRFQV-QRSRDFADPVYGPLDVSAVS 689
Query: 359 NEETSSEPAKAQLAAVGLWTDISARLLSLPS----LEEVCKEPLGGEIIPRSILMTCF-- 412
A AV W ++LS+ S L VC E G +PRS+L+ F
Sbjct: 690 CVPFDRTKNFATNIAVAFWGTNKVQILSMSSQDATLATVC-EVSGLPSLPRSVLLHNFGT 748
Query: 413 -------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNV 465
+ H ++LV L DGS+ F + L +KK +LG P L V
Sbjct: 749 GRTKKEPDYHPHVLVGLVDGSVISFKV--VENELKEKKVFSLGIAPVSLSRCEVDDKITV 806
Query: 466 FACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQK 525
FA R +V+Y +L S V ++ + SLN + SL LA S GTI + K
Sbjct: 807 FAVGSRTSVLYWDKQRLTNSPVMIKDMTVGASLNTSYFRSSLVLAASSGLIIGTIRGVDK 866
Query: 526 LHIRTVPLG-EAPRRIAYQESSQTFGV 551
+ IR++P G PR I Y + FGV
Sbjct: 867 MQIRSIPFGLTNPRWITYHSRLKLFGV 893
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 110/220 (50%), Gaps = 18/220 (8%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT-YFVLGTAVVHPEENEPKQGRIIIF 1067
I+D TF+ L +L E S+++ G D + F +GTA + EE EP+ GR+++F
Sbjct: 915 IVDATTFDGLWDFELQANEEVTSVMALPDGTDGRSPSFCVGTAFLEVEETEPRSGRLLLF 974
Query: 1068 HYD--------DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW--TNEKELRL 1117
DG+L+ +A +++KG + + N + A+I+S V LF TN++
Sbjct: 975 AIGSDGATSSADGELRLVATQDVKGCVFQITSVNSFIAAAISSNVVLFALRNTNKQYALQ 1034
Query: 1118 ECSHFN-NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
+ + +N N L GD ++VGD + S++LL + + E +SRDY P ++E
Sbjct: 1035 QVADWNHNYFVTNLASHGDLLIVGDAISSVSLL--RVSDSRIECLSRDYGPLRPVAVEAT 1092
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+ +GA + NLF A + R L+ G+ HL
Sbjct: 1093 AENQIIGANSYCNLF----SFALQHIDGRKVLERDGSYHL 1128
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 144/351 (41%), Gaps = 69/351 (19%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILE 750
LV+AK NR+E++++ PEGLR ++G++ ++ + +T + ++
Sbjct: 29 LVIAKTNRLEVYSIQPEGLRAESTFDIWGRVLSLRTIPAVETGSCNILALTDHPDVKLIV 88
Query: 751 CRGDIDN--LEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
G D+ L ++TK H ++ +R G+ +E + P V + Y G+ K++ ++
Sbjct: 89 LGGVTDDSGLTLVTKGHVSLQERGGRVAEFVTDVFVHPGGEVAVVSCYAGMLKVVQFKEG 148
Query: 809 NFELKAS-SIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVK--THEISLKEKEFTKT 865
N + A + + E+ I + FLH N I+ I + R V+ + ++ L+ E +
Sbjct: 149 NIDTHAHFDVSIPEMNILALNFLHSDDNQYILAIVNYDHQRRVQLLSRKLDLENYELDPS 208
Query: 866 P-----------WKQDNIEMEASLVIPVPEP----LGGAIIIGQESILY--HSGKSY--- 905
P +IE LV +PE LGG +++G IL+ H+ K+
Sbjct: 209 PSVVLRSTQLSSSHFPSIETPPLLVPILPEGDGGHLGGVLVLGGRKILFFEHTSKNRQQI 268
Query: 906 -------------------VAVAPQIIKS----------------STIVCYAKVDANGER 930
VA A + K S + + +D R
Sbjct: 269 KRWKQIRLESRLSSKDPMEVAKAREKEKERDARKVKPKFSVKWPWSDVTAWCPLDEECRR 328
Query: 931 YLLGDLAGRLFMLLLEK---------EEKMDGTFSVKEPKVELLGEHCKGP 972
+L+GD GRL +L+L+ E T S + +V +G H P
Sbjct: 329 FLVGDAYGRLALLVLDTTGLIVSPLGETSPPTTLSYLDSQVVYVGSHMGNP 379
>gi|330790247|ref|XP_003283209.1| CPSF domain-containing protein [Dictyostelium purpureum]
gi|325086890|gb|EGC40273.1| CPSF domain-containing protein [Dictyostelium purpureum]
Length = 1233
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 225/510 (44%), Gaps = 66/510 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G L+ + L+ + +M V + I + LT L NG +F S GD
Sbjct: 299 FLVQSEFGDLYKITLDFKGEM-----VTAVNISYFDTIPLANSLTVLKNGFLFAASEFGD 353
Query: 142 SQLVKLNRSPDE----NGTYVSVME---------------------SFTNLAPIIDMVVV 176
L D+ N ME + ++L+PI+D V+
Sbjct: 354 HSLYFFKSLGDDTEEGNNEGTITMEEKDGFIWFKQREELKNLVQTSTLSSLSPIVDFKVL 413
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWAL-SIGSPKNLDN 234
D+ R+ QL + G K+ SL+++R+G+ + LPG+ GIW + SP D
Sbjct: 414 DIVREENPQLYSLCGTSKDSSLKVLRHGLSVSTITNAKLPGVPSGIWTVPKSNSPSAQDQ 473
Query: 235 T---LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
T +V+SFVG T VL++ G ++E G T G++ ++LQV P+ I
Sbjct: 474 TDKYIVVSFVGSTSVLSV-GETIQENHESGILESTTTLLIGSMGEDSILQVFPTGFRFI- 531
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEV 349
S R + W P K+I +CN+NQ++ A +G +V Y E+ S + ++ + ++
Sbjct: 532 -RSDMRTNEWRAPGRKTIVRATCNQNQLVIALSGGEVIYFELDQSGGLTEIIKKDFRRDI 590
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP-----------SLEEVCKEPL 398
AC++ISP+ + A+ A+ W + RLLSL ++V E L
Sbjct: 591 ACIEISPIPKGR-----SMARFLAISDW-EGPVRLLSLDRDNCLGQISMLDTDKVYIESL 644
Query: 399 G--------GEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQ 450
+ + G +L V L +G + +LD SG L+D + LG +
Sbjct: 645 SIVEMQVNEAGVDNFKVSSQNMGGSLFLFVGLKNGVIKRATLDNYSGELSDIRTRLLGRR 704
Query: 451 PTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALA 510
P L + + A S R + Y++ KL +++ + + +L+++ P+S+
Sbjct: 705 PVKLFKIKVRGGNGILALSSRVWLNYANQGKLEIVPLSVEPLENASNLSSDQSPESIVAT 764
Query: 511 TDSTFTFGTIDEIQKL-HIRTVPLGEAPRR 539
++ TID++ L + T+ LG PRR
Sbjct: 765 SEDHIIIFTIDKLGDLFNQETIKLGATPRR 794
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 8/201 (3%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGE--DPNTYFVLG---TAVVHPEENEPKQGR 1063
IID + ++ ++QL E SL + F + D + V+G +++P+ E
Sbjct: 883 IIDPISHQVYESYQLDENEAGFSLCTLSFSDRGDGEIFLVVGCGNNVILNPKSCESASIN 942
Query: 1064 IIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHF 1122
+ F + KLQ + + E + Y+M F G+L A + +R+++ +K LR E +
Sbjct: 943 LYKFTEEGKKLQLVYKTEAEEPVYAMAPFQGRLCAGVGKNIRIYDMGKKKLLRKCETKNL 1002
Query: 1123 NNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFL 1182
N I + + GD ++VGD+ S+ ++YK +E + D P W+TS +LD +
Sbjct: 1003 PNTI-VNIHSLGDRLVVGDIQESIHFIKYKKLENMLYVFADDLAPRWITSSVMLDYDTVA 1061
Query: 1183 GAENSYNLFICQKDSAATSDE 1203
GA+ N+FI + S SDE
Sbjct: 1062 GADKFGNIFILRLPSNV-SDE 1081
>gi|409078983|gb|EKM79345.1| hypothetical protein AGABI1DRAFT_39860 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1236
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 161/585 (27%), Positives = 232/585 (39%), Gaps = 133/585 (22%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R++LGD G++ +LL G + LGE+S P LTYL N V++VGS LG
Sbjct: 330 RFILGDAYGKM-VLLSLDNLSDLGLLLIP------LGEVSPPTTLTYLTNQVIYVGSHLG 382
Query: 141 DSQLVKLNRS-------------------------------------------------- 150
DSQLV+L +
Sbjct: 383 DSQLVQLTSTPTTSTDKPTLPIPCDVHVIPSSSFDISAFKKGKARATSPEFDAMDLDGCD 442
Query: 151 ---PDENGTYVSVMESFTN-------LAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
P E+G V S+ N +API+D +VD + GQ Q+VTCSGG GS+
Sbjct: 443 TVSPQESGNIVETRGSYLNVLERFKNIAPILDACLVDPD-SGQRQIVTCSGGKNTGSINA 501
Query: 201 IRNGIGIEEHACIDLPGIK---GIWALSIGSPKNLDNTLVLSFVGHTRVL-------TLS 250
+RNG EE +++PG+ IWAL + D+ L+LSF + ++ +S
Sbjct: 502 VRNGADFEE--IVNIPGVPHVLKIWALKSRLEEAEDSFLLLSFCNSSSLIKINDSGDNIS 559
Query: 251 GAEVEETEMGGFTSDQQTFYCGNVDPRT--------------VLQVTPSAAILI----ST 292
A + G + + T NV R V+QVT S A L+
Sbjct: 560 FAPFDNAIASGLVTVEPTIAFANVAQRVKGQDGKARYMNSSLVVQVTGSGAFLLELDQGL 619
Query: 293 ESKARVSSWEPPNGKS------ISVVSCNKNQV-LCATGCDVYYLEVHGSEIKQLAHRAL 345
++ R+ W + I S N +QV L +G + L V + ++ L
Sbjct: 620 QTYIRIDEWNAKKNVADGITPEIVAASINSSQVALAISGGKLALLSVAEDKKLRVVVSTL 679
Query: 346 -----EYEVACLDISPLSNEETSSEPAKA--QLAAVGLWTD--ISARLLSLPSLEEVCKE 396
+ E++ + SPL+ PA+A Q V W I S + VCK
Sbjct: 680 NDCNRQPEISAISCSPLN-------PARAFSQHIVVSYWESNIIEVFTPSDSGFKSVCKS 732
Query: 397 PLGGEIIPRSILMTC--------FEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLG 448
++ + H YLL L DGS+ F L ++K V+LG
Sbjct: 733 SPLPSLVSSLRFYNFGSDQSSKGADYHPYLLAGLSDGSVATFRWQ--DQELKERKIVSLG 790
Query: 449 TQPTVLKTFRSL-STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSL 507
P L L V A DR V +LV+S + LR + LN S P SL
Sbjct: 791 HAPVSLAVCSILGDAKTVLAAGDRAVVFAYERGRLVYSPILLRNIAAASPLNTSSLPMSL 850
Query: 508 ALATDSTFTFGTIDEIQKLHIRTVPLG-EAPRRIAYQESSQTFGV 551
AT G I ++ KLHIR++P G + PR+I +Q FGV
Sbjct: 851 VAATAEGLHIGKIKDLNKLHIRSIPFGLDNPRKITHQPLLSAFGV 895
Score = 83.2 bits (204), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 27/223 (12%)
Query: 994 QPADFNM-EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDP--NTYFVLGTA 1050
+PA+ EV ++D +FE+L E +S+I D +FVLGT
Sbjct: 901 EPAEIGAHEVRKSFFSLLDDASFEVLAKFDCDADEEIVSIIPFSAVVDGILTPFFVLGTF 960
Query: 1051 VVHPEENEPKQGRIIIFHYDDG----------KLQQIAEKEIKGACYSMCEFN-----GK 1095
+ PEE EP +GRI++ +L A E++G Y++ +
Sbjct: 961 IFRPEEFEPDKGRILLISISTTNNPRNPRQGYQLSLAASIEVRGCVYALTPIVDDKPVAR 1020
Query: 1096 LLASINSTVRLFEWTNEKELRLECSHF-------NNIIALFLKVKGDFILVGDLMRSLTL 1148
++A++NS+V LF + ++ H +N + L G+ + VGD + S++L
Sbjct: 1021 IVAAVNSSVNLFSLDIDTKIYPAGLHLRKMAEWNHNYLVTGLGAVGNHVFVGDQISSVSL 1080
Query: 1149 LQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
L K E F+ ++RDY P W S+E +D++ + A ++ N+F
Sbjct: 1081 L--KCTEEKFQTVARDYGPRWPVSVEAIDEKNVIAANDALNIF 1121
Score = 44.3 bits (103), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 95/205 (46%), Gaps = 11/205 (5%)
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
++ R +LVVAK NR+E++++ P G+ + +YGK+A + + +L+ ++
Sbjct: 21 LSTRDIEHLVVAKLNRVEVYSLQPTGVSHECSLGVYGKVA------SKSTRSNLVVLLAH 74
Query: 743 RYNAMILECRGDIDNL--EILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLF 800
+I + +++ E+ + +R + +E ++ P ++ + Y G
Sbjct: 75 PDPELIFLSYAESESMPAELQLTKQLPLYERTPRAAEFFNDILVHPSGKLAVVSCYIGKL 134
Query: 801 KIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNP-TIICIHQDVNGR-HVKTHEISLK 858
KII L+ FE + I + EL + + FL + + IH D R + +I L+
Sbjct: 135 KIINLKAGRFENEFDVI-LPELNVFSLSFLPLPPDEYALAIIHLDHQQRVQLLARDIDLE 193
Query: 859 EKEFTKTPWKQDNIEMEASLVIPVP 883
+ + + +P Q + M + + P P
Sbjct: 194 DVQLSSSPSTQLHSTMISDKLFPYP 218
>gi|426195893|gb|EKV45822.1| hypothetical protein AGABI2DRAFT_72896 [Agaricus bisporus var.
bisporus H97]
Length = 1229
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 164/596 (27%), Positives = 237/596 (39%), Gaps = 137/596 (22%)
Query: 73 SLW---NGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLD 129
S W +G+S R++LGD G++ +LL G + LGE+S P LTYL
Sbjct: 313 SAWCCIDGFS-RFILGDAYGKM-VLLSLDNLSDLGLLLIP------LGEVSPPTTLTYLT 364
Query: 130 NGVVFVGSRLGDSQLVKLNRS--------------------------------------- 150
N V++VGS LGDSQLV+L +
Sbjct: 365 NQVIYVGSHLGDSQLVQLTSTPTTSTDKPTLPIPCDVHVIPSSSFDISAFKKGKARATSP 424
Query: 151 --------------PDENGTYVSVMESFTN-------LAPIIDMVVVDLERQGQGQLVTC 189
P E+G V S+ N +API+D +VD + GQ Q+VTC
Sbjct: 425 EFDAMDLDGSDTVSPQESGNIVETRGSYLNVLERFKNIAPILDACLVDPD-SGQRQIVTC 483
Query: 190 SGGFKEGSLRIIRNGIGIEEHACIDLPGIK---GIWALSIGSPKNLDNTLVLSFVGHTRV 246
SGG GS+ +RNG EE +++PG+ IWA+ + D+ L+LSF + +
Sbjct: 484 SGGKNTGSINAVRNGADFEE--IVNIPGVPHVLKIWAVKSRLEEAEDSFLLLSFCNSSSL 541
Query: 247 L-------TLSGAEVEETEMGGFTSDQQTFYCGNVDPRT--------------VLQVTPS 285
+ +S A + G + + T NV R V+QVT S
Sbjct: 542 IKINDSGDNISFAPFDNAIASGLVTVEPTIAFANVAQRVKGQDGKARYMNSSLVVQVTGS 601
Query: 286 AAILI----STESKARVSSWEPPNGKS------ISVVSCNKNQV-LCATGCDVYYLEVHG 334
A L+ ++ R+ W + I S N +QV L +G + L V
Sbjct: 602 GAFLLELDQGLQTYIRIDEWNAKKNVADGITPEIVAASINSSQVALAISGGKLALLSVAE 661
Query: 335 SEIKQLAHRAL-----EYEVACLDISPLSNEETSSEPAKA--QLAAVGLWTD--ISARLL 385
+ ++ L + E++ + SPL+ PA+A Q V W I
Sbjct: 662 DKKLRVVVSTLNDCNRQPEISAISCSPLN-------PARAFSQHIVVSYWESNIIEVFTP 714
Query: 386 SLPSLEEVCKEPLGGEIIPRSILMTC--------FEGHCYLLVALGDGSMFYFSLDPASG 437
S VCK ++ + H YLL L DGS+ F
Sbjct: 715 SDSGFRSVCKSSPLPSLVSSLRFYNFGSDQSSKGADYHPYLLAGLSDGSVATFRWQ--DQ 772
Query: 438 RLTDKKKVTLGTQPTVLKTFRSL-STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMC 496
L ++K V+LG P L L V A DR V +LV+S + LR +
Sbjct: 773 ELKERKIVSLGHAPVSLAVCSILGDAKTVLAAGDRAVVFAYERGRLVYSPILLRNIAAAS 832
Query: 497 SLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG-EAPRRIAYQESSQTFGV 551
LN S P SL AT G I ++ KLHIR++P G + PR+I +Q FGV
Sbjct: 833 PLNTSSLPMSLVAATAEGLHIGKIKDLNKLHIRSIPFGLDNPRKITHQPLLNAFGV 888
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 27/223 (12%)
Query: 994 QPADFNM-EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDP--NTYFVLGTA 1050
+PA+ EV ++D +FE+L E +S+I D +FVLGT
Sbjct: 894 EPAEIGAHEVRKSFFSLLDDASFEVLAKFDCDADEEIVSIIPFSAVVDGILTPFFVLGTF 953
Query: 1051 VVHPEENEPKQGRIIIFHYDDG----------KLQQIAEKEIKGACYSMCEFN-----GK 1095
+ PEE EP +GRI++ +L A E++G Y++ +
Sbjct: 954 IFRPEEFEPDKGRILLISISTTNNPRNPRQGYQLSLAASIEVRGCVYALTPIVDDKPVAR 1013
Query: 1096 LLASINSTVRLFEWTNEKELRLECSHF-------NNIIALFLKVKGDFILVGDLMRSLTL 1148
++A++NS+V LF + ++ H +N + L G + VGD + S++L
Sbjct: 1014 IVAAVNSSVNLFSLDIDTKIYPAGLHLRKMAEWNHNYLVTGLGAVGSHVFVGDQISSVSL 1073
Query: 1149 LQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
L K E F+ ++RDY P W S+E +D++ + A ++ N+F
Sbjct: 1074 L--KCTEEKFQTVARDYGPRWPVSVEAIDEKNVIAANDALNIF 1114
>gi|324501533|gb|ADY40680.1| Splicing factor 3B subunit 3 [Ascaris suum]
Length = 1214
Score = 142 bits (359), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 126/511 (24%), Positives = 225/511 (44%), Gaps = 54/511 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G +F + LE E + V E K++ I + + L G +F S GD
Sbjct: 302 FLVQTDQGDIFKVTLESEHDI-----VTELKIKYFDTIPLANAMCILKTGFLFTASEFGD 356
Query: 142 SQLVKLNRSPDENG--------------TY---------VSVMESFTNLAPIIDMVVVDL 178
L ++ DE+ T+ ++V++ +L P+I + DL
Sbjct: 357 HHLYQIAHLGDEDDEPEYSSRMQLDEGETFFFAPRGLLNLAVVDQIDSLCPLISCHIDDL 416
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +L+++RNG+ + E A +LPG +W + D+ +V
Sbjct: 417 ANEDAPQLYALCGRSARSALKVLRNGLEVTEMAVSELPGNPNAVWTVKRNIDDKYDSHIV 476
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T CG + +LQV P I + R
Sbjct: 477 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLGCGLIGDDALLQVYPDGIRHIRADR--R 533
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYY--LEVHGSEIKQLAHRALEYEVACLDI 354
V+ W+ P ++I + N+ QV A G ++ Y L+V G + R L +V C+ +
Sbjct: 534 VNEWKAPGKRTIIKCALNRRQVAIALAGGEIVYFELDVTGQLNEYTERRELPADVLCMSL 593
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRS----ILMT 410
S + E +++ VGL D + R++SL + C PL + +P I++
Sbjct: 594 SEIPEGEL-----RSRFLTVGL-ADKTVRIISLDPQD--CLAPLSMQALPSEPESIIVLE 645
Query: 411 CFEGH------CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
F G +L + L +G + ++D +G LTD + LGT+ L R S
Sbjct: 646 MFGGEGQSASTVHLNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTRSVNLFRVRIQSKDA 705
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
+ A S R ++Y+ + + ++ + + ++E P+ + ++T +++++
Sbjct: 706 IMAASSRAWLLYNYQSRFHLTPLSYTALEYAAGFSSEQCPEGIVAIAENTLRILSLEKLG 765
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + V PL PRR+ ++S VI T
Sbjct: 766 AVFNQAVYPLDYTPRRMIIHKASGNLIVIET 796
>gi|343429611|emb|CBQ73184.1| related to UV-damaged DNA-binding protein [Sporisorium reilianum
SRZ2]
Length = 1505
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 234/543 (43%), Gaps = 105/543 (19%)
Query: 109 KEPKVELLGEISIP---ECLTYLDNGVVFVGSRLGDSQLVKLNR---------SPDEN-- 154
K +VE LG S P + L+YL +G++ VGS GDS L K+ + SP E
Sbjct: 545 KSMRVETLGTTSQPAGPQALSYLGDGLICVGSATGDSCLYKILQQGAEQDMPLSPKEQLL 604
Query: 155 -----------------------------GTYVSVMESFTNLAPIIDMVVVD-------L 178
++V+E++ NL P+++ VV D
Sbjct: 605 TPPSSPTQSRRRRSSQVVGASLDNTELPTAGSLAVVETWQNLGPVVEFVVDDGAGGDPTC 664
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT-LV 237
Q ++VTCSG GS+R R+G +++ + + +P + IW + G+ + + L+
Sbjct: 665 SSGAQARIVTCSGAGPSGSIREARSGASVQDVSSLSIPNAQQIWPVHAGNDASKYSVGLL 724
Query: 238 LSFVGHTRVLTLSG----AEVEE------TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAA 287
L F T L A+ + T++ T T + + P+ +L++T S A
Sbjct: 725 LGFATSTAYLHFDAKGDLADATDRLAATGTDLTLPTLAASTVWSSDHQPQ-LLRITRSEA 783
Query: 288 ILIS--TESKARVSSWEPPNGKSISVVSCNKNQ--VLCATGCDVYYLEVHGSEIKQLAHR 343
L+S ES + + W PP G ++ S N + VL + + +L V + +
Sbjct: 784 CLVSLNDESASLLHQWVPPKGLEVTAASANVHGQVVLALSDKTLLHLSVESGALVEKGKV 843
Query: 344 ALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGE-- 401
LE+EV+C+D+SPL + AQLAA G W + ++ SLP L V + + +
Sbjct: 844 QLEHEVSCVDVSPLVAGKA------AQLAACGFWQTRTIQIYSLPELAAVGQSSVVQQRF 897
Query: 402 -IIPRSILMTCFEGH---------------------CYLLVALGDGSMFYFSLD-PASGR 438
+PRSIL+ F +LL+ LGDG++ +SL P
Sbjct: 898 PAVPRSILLHRFASKQTDGGSDTQSKGSLSNRDALTPHLLIGLGDGTLVSYSLSLPTHDS 957
Query: 439 ------LTDKKKVTLGTQPTVLKTFRSLSTTNVFACS-DRPTVIYSSNHKLVFSNVNLRQ 491
L+D K V+LGTQ L + + V A S RPT++Y+ + + ++ + +
Sbjct: 958 YSKTVGLSDAKTVSLGTQALKLDALETAAGARVVAVSGSRPTLVYADSKRFSYNALKYKD 1017
Query: 492 VNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG-EAPRRIAYQESSQTFG 550
+ +L+A A A + +I +++ IRT PLG P I + F
Sbjct: 1018 QRTVATLHAGQERVFAAFALSDSVELASIGALRQRDIRTFPLGLNQPLAITQWANRGVFA 1077
Query: 551 VIT 553
V T
Sbjct: 1078 VCT 1080
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 27/210 (12%)
Query: 1009 IIDQNTFEILHAHQLFPGEY--ALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIII 1066
I+DQ TFE L +L P E ++++ ++ E V+GT V + +E QGR++
Sbjct: 1101 ILDQTTFETLDEIRLEPDERPNCITVLQAQGHE----ILVVGTGFVSEQASETTQGRLVG 1156
Query: 1067 FHYDDG---------KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK---- 1113
F +G +L+++ E G YS+ N +L A++NS V+++ + +
Sbjct: 1157 FDVSNGSSRTKEERGRLRKLFEHSETGNVYSVQSINNRLAAAVNSEVKIYSVVDPRPSEV 1216
Query: 1114 -----ELRLECSHFNNIIALFLKV-KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNP 1167
+R S + IA L V + D I+VGD +RS+ +L E++RD +P
Sbjct: 1217 PAPRIRVRQRGSWACSFIACNLSVIEPDRIVVGDALRSMNVLHVHPYTARLTELARDCDP 1276
Query: 1168 NWMTSIEILDDE--LFLGAENSYNLFICQK 1195
W ++ ++LDDE ++GA+ S+NL+ Q+
Sbjct: 1277 FWTSATDLLDDESQTYIGADISFNLYTTQR 1306
>gi|19114492|ref|NP_593580.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces pombe 972h-]
gi|46395602|sp|O13807.1|DDB1_SCHPO RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|2330717|emb|CAB11219.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces pombe]
Length = 1072
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 218/468 (46%), Gaps = 40/468 (8%)
Query: 79 SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSR 138
S Y++ D +G L+ K D T S++ +E LGE SI CL L + +FVGS
Sbjct: 276 SSIYIVADESGMLYKF---KALFTDETVSME---LEKLGESSIASCLIALPDNHLFVGSH 329
Query: 139 LGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSL 198
+S L++L S +N + ++++F N+API D ++ D Q ++TCSG +K+G+L
Sbjct: 330 FNNSVLLQL-PSITKNNHKLEILQNFVNIAPISDFIIDD--DQTGSSIITCSGAYKDGTL 386
Query: 199 RIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
RIIRN I IE A I++ GIK +++S + N DN + LS + TR + +S V
Sbjct: 387 RIIRNSINIENVALIEMEGIKDFFSVSFRA--NYDNYIFLSLICETRAIIVSPEGVFSAN 444
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+ F +LQ+T L + ++ SW P SI+ S +
Sbjct: 445 HDLSCEESTIFVSTIYGNSQILQITTKEIRLFDGK---KLHSWISP--MSITCGSSFADN 499
Query: 319 VLCAT-GCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
V A G + + E I ++ + EV+ L + + + VGLW
Sbjct: 500 VCVAVAGGLILFFE----GITEVGRYQCDTEVSSLCFT------------EENVVYVGLW 543
Query: 378 TDISARLLSLPSLEE--VCKEPLGGEIIPRSILMTCFEGH--CYLLVALGDGSMFYFSLD 433
SA ++ L ++ L IPRSI+ + G L V+ +G + F+
Sbjct: 544 ---SADIIMLTYCQDGISLTHSLKLTDIPRSIVYSQKYGDDGGTLYVSTNNGYVLMFNFQ 600
Query: 434 PASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVN 493
++ LG P +LK F S +FA ++P ++Y + KLV + ++ ++
Sbjct: 601 NGQVIEHSLRRNQLGVAPIILKHFDSKEKNAIFALGEKPQLMYYESDKLVITPLSCTEML 660
Query: 494 HMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIA 541
++ S S ++ T+S + + EI+ L+++TV + PRRI
Sbjct: 661 NISSYVNPSLGVNMLYCTNSYISLAKMSEIRSLNVQTVSVKGFPRRIC 708
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 109/211 (51%), Gaps = 8/211 (3%)
Query: 1007 LLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIII 1066
L + ++NT + H+ EY ++ S + + V+GT P+++ P GR+++
Sbjct: 736 LRVYEKNTLSEIAHHKF--NEY--EMVESIILMNDDKRVVVGTGFNFPDQDAPDSGRLMV 791
Query: 1067 FHY-DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNI 1125
F D ++ AE +++G+ ++ + ++A IN++V +FE+ + + + S
Sbjct: 792 FEMTSDNNIEMQAEHKVQGSVNTLVLYKHLIVAGINASVCIFEYEH-GTMHVRNSIRTPT 850
Query: 1126 IALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAE 1185
+ + V D I+ DLM+S+T+LQ+ ++ E++RDY+P W TS+EIL + + E
Sbjct: 851 YTIDISVNQDEIIAADLMKSITVLQF--IDDQLIEVARDYHPLWATSVEILSERKYFVTE 908
Query: 1186 NSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
N I +D+ + DR L+ +L
Sbjct: 909 ADGNAVILLRDNVSPQLSDRKKLRWYKKFYL 939
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 134/294 (45%), Gaps = 21/294 (7%)
Query: 664 IAVMKFFRGPTDKKDLLFI-ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIA 722
+ + + P+ ++ +F + N++VAK N +E+++ L + ++ KI
Sbjct: 1 MTYVTYLHKPSSIRNAVFCKFVNASSWNVIVAKVNCLEVYSYENNRLCLITSANIFAKIV 60
Query: 723 VMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIA 782
+K F+ + D + + T + L + + + K + S+R + S++G +
Sbjct: 61 NVKAFKPVSSPTDHIIVATDSFRYFTLFWDANDNTVSNGIKIQ-DCSERSLRESQSGPLL 119
Query: 783 IIDPEARVIGLRLYNGLFKIIPLEKDNFELKAS----------SIRMEELEIQDVQFLHG 832
++DP RVI L +Y GL IIP+ K S S+R++EL + D+ L+
Sbjct: 120 LVDPFQRVICLHVYQGLLTIIPIFKSKKRFMTSHNNPSLHDNFSVRIQELNVVDIAMLYN 179
Query: 833 CQNPTIICIHQDVNG-RHVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAII 891
P++ +++D H+ T++I+++E+E + +IE E L +P GG +
Sbjct: 180 SSRPSLAVLYKDSKSIVHLSTYKINVREQEIDEDDVVCHDIE-EGKL---IPSENGGVFV 235
Query: 892 IGQESILYHSGKSYVA----VAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLF 941
G+ + Y S V+ P S +I + + Y++ D +G L+
Sbjct: 236 FGEMYVYYISKDIQVSKLLLTYPITAFSPSISNDPETGLDSSIYIVADESGMLY 289
Score = 46.6 bits (109), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 1 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+G+LRIIRN I IE A I++ GIK +++S + N DN + LS + TR + +S
Sbjct: 383 DGTLRIIRNSINIENVALIEMEGIKDFFSVSFRA--NYDNYIFLSLICETRAIIVS 436
>gi|409049568|gb|EKM59045.1| hypothetical protein PHACADRAFT_181065 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1268
Score = 139 bits (351), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 151/577 (26%), Positives = 229/577 (39%), Gaps = 131/577 (22%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
R+ +GD+ GRL +L + + ++ + LGEIS P L+YL + V++VGS L
Sbjct: 343 RRFFVGDVFGRLSLLTINDDPEL---------IIIPLGEISSPTTLSYLSSQVLYVGSVL 393
Query: 140 GDSQLVKLN-------------------------------RSPDEN-------------- 154
G+SQL++++ SPDE+
Sbjct: 394 GNSQLLRISPSPVGDIDSDTLPIPGGIHTIKPAELSTLRAESPDEDYDMRDAFDTPEGRG 453
Query: 155 -------GTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGI 207
G ++ + + N+API+D V+ D + GQ Q++TCSGG GSL ++R G
Sbjct: 454 GKIVNCKGRFIEELTQYANIAPIVDAVMADPDESGQPQIITCSGGANTGSLNVVRTGADF 513
Query: 208 EEHACI-DLPGIKGIWAL--SIGSPKN-------LDNTLVLSFVGHTRVLTLSGAEVEET 257
+E A + ++P + IW + S P + L + VL F V + + E
Sbjct: 514 QELAVLNEIPNVTNIWPIRTSFDGPADTYVLATTLYESFVLRFDDGDSVTRIDPSATE-- 571
Query: 258 EMGGFTSDQQTFYCGNVDPRT-------------VLQVTPSAAILISTESKARV-----S 299
+++ T N+ RT V+QVTP L+ +
Sbjct: 572 ----LVTNRPTIAVANIPRRTTQQNASTYINSSLVVQVTPQGLNLVEYDVALGAFNKVGD 627
Query: 300 SW-----EPP--NGKSISVVSCNKNQVLCATGCDVYYL--EVHGSEIKQLAHRALE-YEV 349
W E P K I S N +Q A + L ++ L R E+
Sbjct: 628 GWSLQKQENPLWRAKEIVAASINPSQFAVALNGGTFLLFNLSPDGQLNLLQTREFHGKEI 687
Query: 350 ACLDISPLSNEETSSEPAK--AQLAAVGLWTDISARLLSL--PSL-EEVCKEPLGGEIIP 404
A L +PL +P+K + AV W + LLS P+L PL +
Sbjct: 688 AALSCAPL-------DPSKNFSPFVAVSFWGSNTVTLLSTKDPALGTHTESAPLPA--LA 738
Query: 405 RSILMTCF---------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLK 455
S+L+ F + Y++ L DG++ S + L D+K LG P L
Sbjct: 739 HSLLLHNFGAGRSTRDADFQPYVVAGLVDGTVACVSFR--NNELRDQKLFALGAAPVSLA 796
Query: 456 TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTF 515
V A R V Y +L S V L+ V LN ++P LAT S+
Sbjct: 797 VSTVDGARMVLATGSRAAVFYWDRQRLRQSPVMLKNVAVGAGLNTAAFPACQILATPSSL 856
Query: 516 TFGTIDEIQKLHIRTVPLG-EAPRRIAYQESSQTFGV 551
G I + K+ IR+ LG E+PRRIAY FGV
Sbjct: 857 VVGQIRGVDKMQIRSFGLGHESPRRIAYHSDLNLFGV 893
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 18/225 (8%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E++ I D TF + P E ++++ G P FV+GT E EP
Sbjct: 907 ELQESTFEIKDSVTFSTISLFTAEPDEEITAVLALPAGA-PGC-FVVGTVKHQHGEFEPS 964
Query: 1061 QGRIIIF----HYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLF---EWTNE 1112
GR+I+F D G+ L+++AE E G Y++ + A++N++V L+ E
Sbjct: 965 AGRLILFGVVPSVDGGRELKKLAEAEANGCVYALAAVENGVAAAVNTSVDLYGMVEHEGA 1024
Query: 1113 KELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS-FEEISRDYNPNWMT 1171
L + +N L +G ++ GD + S+++L+ + GS I+RDY P W
Sbjct: 1025 HALEKVAAWNHNYFVTSLVARGGRLIAGDAISSVSVLE--VLRGSHLRTIARDYGPVWPV 1082
Query: 1172 SIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
++E D +GA NLF + A + R L+ G HL
Sbjct: 1083 AVEATKDGGVIGANTDGNLF-----TFALPEGPRAVLERNGHYHL 1122
Score = 47.8 bits (112), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 10/164 (6%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKK---DLLFIITQRYNAM 747
LVVAK +RIE+ ++ P+GLR + ++G+ V+ P + + +LL + Y +
Sbjct: 30 LVVAKTDRIEVSSIQPDGLRKECTLDIWGR--VLSVCAVPAEAEGVSNLLVLTDHPYPKL 87
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
IL + E+ K ++ DR + +E ++ P R + Y G K++ +K
Sbjct: 88 ILFAFNG-ETRELDEKWFADLHDRNARHAEYLNDIVVHPAGRAAAVSCYAGKLKVVTFKK 146
Query: 808 DNFELKASSIRMEELEIQDVQFLHGCQNP---TIICIHQDVNGR 848
+ K + + EL + + FL+ N T+ +H D R
Sbjct: 147 GGVD-KHFEVILPELNLLALSFLYSEPNAHTHTLAIMHIDHKQR 189
>gi|218199276|gb|EEC81703.1| hypothetical protein OsI_25307 [Oryza sativa Indica Group]
Length = 1429
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 133/566 (23%), Positives = 232/566 (40%), Gaps = 90/566 (15%)
Query: 103 DGTFSVKEPKVELLGEISIPEC---------LTYLDNGVVFVGSRLGDSQLVKLNRSPDE 153
DG F + E +++ G +PEC L ++D G+V +GD +++L E
Sbjct: 413 DGEFHLLEFSLDMEGVKVLPECVHRGLPCKPLLWMDKGMVVGFVEMGDGMILQL-----E 467
Query: 154 NGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI 213
N V + N+API+D+ + D + Q Q+ C G EGSLR+IRNG+ +E+
Sbjct: 468 NNRLVH-KSAIQNVAPILDLAIADHHGEKQDQMFACCGMCPEGSLRVIRNGVNVEKLLRT 526
Query: 214 D--LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
D G+ G+W L + + LVLSFV TR+L++ + + + GF +D T C
Sbjct: 527 DPIYHGVTGLWTLRMKRTDAYHSFLVLSFVEETRILSVGLSFNDICDAVGFQTDVCTLAC 586
Query: 272 GNVDPRTVLQVTPSAAILISTESKAR----------VSSWEPPNGKSISVVSCNKNQVLC 321
G V ++Q+ L + A + W P S+ V N V
Sbjct: 587 GLVADGLLVQIHSKCVKLCLPTACAHPEGTLLPSPVCADWYPDVTISVGAVGHNVVVVAT 646
Query: 322 ATGCDVYYLEVHG-----SEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVG- 375
+ C +Y L V E+ ++ H L YEV+C+ I E+ + + + A G
Sbjct: 647 SNPCCLYILGVRSLSSFQYELYEIQHVQLHYEVSCISI---PQEDWRLDNSSSSCATSGD 703
Query: 376 LWTDISARLLSL-------PSLEEVCKEP-----------------LGGEI---IPRSIL 408
D +A + PS+ + EP LG I IP ++
Sbjct: 704 FRKDFAANIRKFAVIGTHEPSVHIISLEPGEAFQQLAVGHISVNNALGTPISGCIPENVR 763
Query: 409 MTCFEGHCYLLVALGDGSMFYFSLDPASGRL------------TDKKKVTL------GTQ 450
Y+L L +G + F + G D + L G
Sbjct: 764 FVA-AARFYILAGLRNGMLLRFESQTSKGHCFPGSFYKESSTPCDDTSLMLIAVRRIGIT 822
Query: 451 PTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALA 510
P VL + ++ DRP +++S+ H L +S+++ +H+ +++ P+ L
Sbjct: 823 PVVLVPLHDRANADIIVLGDRPWLLHSARHSLAYSSISFLPASHVTPVSSTDCPNGLLFV 882
Query: 511 TDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPS 570
+++ + ++L+ + +G PR++ Y S+T V+ T G T V S
Sbjct: 883 SENCLHLVEMVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRT--------GLTSVSCS 934
Query: 571 ASTQAQNTTSSTISSLSYIKPGSTKQ 596
+ + ++ + S +PG T +
Sbjct: 935 SDIVQIDPSNGALLSRFKCEPGETAK 960
Score = 45.8 bits (107), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEEHACID--LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLR+IRNG+ +E+ D G+ G+W L + + LVLSFV TR+L++
Sbjct: 508 EGSLRVIRNGVNVEKLLRTDPIYHGVTGLWTLRMKRTDAYHSFLVLSFVEETRILSV 564
>gi|429329284|gb|AFZ81043.1| CPSF A subunit region domain-containing protein [Babesia equi]
Length = 1175
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 224/512 (43%), Gaps = 50/512 (9%)
Query: 91 LFMLLLEKE----EKMDGTFS---VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQ 143
F +L++ E K++ T+ VKE + + L L +G +FV S G+
Sbjct: 298 FFFILIQSEFGDVYKVELTYEEGVVKEIVCRYFDTVPVSVSLCILRSGYLFVASEFGNHH 357
Query: 144 LVKLN------RSPDENGTY-----------------VSVMESFTNLAPIIDMVVVDLER 180
L + R P + + +++ ++L+ I DM V D++
Sbjct: 358 LYQFTGLGTDERDPLCTSLHPHGRSAIIAFKPRALQNLQLVDELSSLSAITDMKVADIQG 417
Query: 181 QGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLS 239
GQ Q+ G SLR++R GI IE A +LPG K +W + D +++
Sbjct: 418 LGQHQIFLGCGRGSRSSLRVLRYGIAIEGLASSELPGRPKSVWTVRSSFESAYDGFIIVG 477
Query: 240 FVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVS 299
F G+T VL++ G VEE F + T + + + +QV + I RV
Sbjct: 478 FEGNTLVLSV-GEAVEEVTDSCFLTSITTLHVALMGDGSFIQVHDAG---IRHVYDQRVK 533
Query: 300 SWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDISPL 357
W P+ K + V + N QV+ +G DV Y E+ S + + A ++L E++CLD+ P
Sbjct: 534 EWRAPSSKRVKVAASNDRQVILGLSGGDVIYFEIDDSGNLVEYAKKSLSVEISCLDLQP- 592
Query: 358 SNEETSSEPAKAQLAAVGLWTDISARLLSL-PSLEEVCKEPLGGEIIPRSILMTCF---- 412
T A A+G D S R+L+L SL+ V + L P S+ ++ F
Sbjct: 593 ----TPKGRILANFMAIGTL-DNSVRVLTLDKSLKVVSTQILSNNSTPESVCISEFAVGD 647
Query: 413 EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRP 472
YL V L G M ++DP SG L+D++ LG + + S+ + A SD+P
Sbjct: 648 SSLVYLHVGLNTGVMLRSTVDPISGALSDQESRFLGGRAVKFRRVSLGSSFAIVALSDKP 707
Query: 473 TVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRT-V 531
+IY+ L+ S +N+ + SL + PD + +T + + + +
Sbjct: 708 WLIYTHRGILLVSPINVGTLESADSLISPICPDGFVAVSGNTLRIFRCTSLGETFAESQL 767
Query: 532 PLGEAPRRIAYQES-SQTFGVITTRIDIQEAD 562
PL PR++ S + + G + + I E+D
Sbjct: 768 PLTYTPRKLVLMPSEAPSVGSLNYMLAIVESD 799
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 1045 FVLGTAVVHPEENEPKQ--GRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASIN 1101
V+GTA+ + +P G + ++ Y + +++ + I G ++ + GKL+ ++
Sbjct: 880 LVVGTAIGMNLKGDPDSVSGYLRVYAYGANYEIRLLHATPITGVPRALAGYEGKLICALG 939
Query: 1102 STVRLFEWTNEKELRLECSH--FNNIIALFLKVKGDFILVGDLMRSLTLLQ---YKTMEG 1156
S +RL+ +++L L+ H + +++ V G I GD+ LL+ Y
Sbjct: 940 SRLRLYAL-GKRQLLLKAEHRTCTDHGFIWISVCGSRIFAGDIREGFQLLRLRFYAEDAA 998
Query: 1157 SFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ 1194
FE I P W++ E LD +G + +LFI +
Sbjct: 999 EFEWIGHSTGPRWLSCCEQLDYHTVIGGDKFDSLFIAR 1036
>gi|33146591|dbj|BAC79787.1| putative Splicing factor 3B subunit 3 [Oryza sativa Japonica Group]
gi|222636635|gb|EEE66767.1| hypothetical protein OsJ_23488 [Oryza sativa Japonica Group]
gi|429459546|gb|AFZ84679.1| spotted leaf 5 [Oryza sativa Japonica Group]
Length = 1355
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 136/568 (23%), Positives = 234/568 (41%), Gaps = 94/568 (16%)
Query: 103 DGTFSVKEPKVELLGEISIPEC---------LTYLDNGVVFVGSRLGDSQLVKLNRSPDE 153
DG F + E +++ G +PEC L ++D G+V +GD +++L E
Sbjct: 413 DGEFHLLEFSLDMEGVKVLPECVHRGLPCKPLLWMDKGMVVGFVEMGDGMILQL-----E 467
Query: 154 NGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI 213
N V + N+API+D+ + D + Q Q+ C G EGSLR+IRNG+ +E+
Sbjct: 468 NNRLVH-KSAIQNVAPILDLAIADHHGEKQDQMFACCGMCPEGSLRVIRNGVNVEKLLRT 526
Query: 214 D--LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
D G+ G+W L + + LVLSFV TR+L++ + + + GF +D T C
Sbjct: 527 DPIYHGVTGLWTLRMKRTDAYHSFLVLSFVEETRILSVGLSFNDICDAVGFQTDVCTLAC 586
Query: 272 GNVDPRTVLQVTPSAAILISTESKAR----------VSSWEPPNGKSISVVSCNKNQVLC 321
G V ++Q+ L + A + W P +ISV + N V+
Sbjct: 587 GLVADGLLVQIHSKCVKLCLPTACAHPEGTLLPSPVCADWYP--DVTISVGAVGHNVVVV 644
Query: 322 ATG--CDVYYLEVHG-----SEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAV 374
AT C +Y L V E+ ++ H L YEV+C+ I E+ + + + A
Sbjct: 645 ATSNPCCLYILGVRSLSSFQYELYEIQHVQLHYEVSCISI---PQEDWRLDNSSSSCATS 701
Query: 375 G-LWTDISARLLSL-------PSLEEVCKEP-----------------LGGEI---IPRS 406
G D +A + PS+ + EP LG I IP +
Sbjct: 702 GDFRKDFAANIRKFAVIGTHEPSVHIISLEPGEAFQQLAVGHISVNNALGTPISGCIPEN 761
Query: 407 ILMTCFEGHCYLLVALGDGSMFYFSLDPASGRL------------TDKKKVTL------G 448
+ Y+L L +G + F + G D + L G
Sbjct: 762 VRFVA-AARFYILAGLRNGMLLRFESQTSKGHCFPGSFYKESSTPCDDTSLMLIAVRRIG 820
Query: 449 TQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLA 508
P VL + ++ DRP ++ S+ H L +S+++ +H+ +++ P L
Sbjct: 821 ITPVVLVPLHDRANADIIVLGDRPWLLQSARHSLAYSSISFLPASHVTPVSSTDCPSGLL 880
Query: 509 LATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVR 568
+++ + ++L+ + +G PR++ Y S+T V+ T G T V
Sbjct: 881 FVSENCLHLVEMVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRT--------GLTSVS 932
Query: 569 PSASTQAQNTTSSTISSLSYIKPGSTKQ 596
S+ + ++ + S +PG T +
Sbjct: 933 CSSDIVQIDPSNGALLSRFKCEPGETAK 960
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEEHACID--LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLR+IRNG+ +E+ D G+ G+W L + + LVLSFV TR+L++
Sbjct: 508 EGSLRVIRNGVNVEKLLRTDPIYHGVTGLWTLRMKRTDAYHSFLVLSFVEETRILSV 564
>gi|348572800|ref|XP_003472180.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 3-like
[Cavia porcellus]
Length = 1215
Score = 136 bits (343), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 212/511 (41%), Gaps = 63/511 (12%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ +S E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVSPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ GLWT R++S PS C +PL + +P C
Sbjct: 600 Q-----RSRFPGCGLWT--YCRIISDPS---DCLQPLSMQALPAQPESLCIVEMGGTEKQ 649
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 650 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 709
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 710 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 769
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 770 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 800
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F ++VL N ++ Y
Sbjct: 870 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 926
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 927 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 986
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 987 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 1045
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1046 DKFGNICVVRLPPNTNDEVDEDPT 1069
>gi|308805058|ref|XP_003079841.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
gi|116058298|emb|CAL53487.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
Length = 1166
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 221/488 (45%), Gaps = 58/488 (11%)
Query: 108 VKEPKVELLGEISIPECLTY--LDNGVVFVGSRLGDSQLVKLNRSPDENG---TYVSVME 162
V E KV+ +IP C++ L G +F S G+ L + D++ + S+ME
Sbjct: 319 VSEVKVKYFD--TIPPCVSMCVLKTGFLFAASEFGNHALYQFAGIGDDDAVESSSASLME 376
Query: 163 S-------------FTNL---------APIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
+ TNL PI+DM +L + QL T G SLRI
Sbjct: 377 TEQGYEPVFFDPRRLTNLYPIDKIDSLCPILDMQAHNLTEEDTPQLYTLCGTGARSSLRI 436
Query: 201 IRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
+R GIG+ E A LPG I+ + S D +V+SF+ T VL + G V E
Sbjct: 437 LRQGIGMNELAMSSLPGQPNAIFTVKKKSSDQYDGYIVVSFLNATLVLAI-GDTVTEVSD 495
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
G T ++ ++LQV A L ++ R++ W P K IS +CN QV
Sbjct: 496 SGILGTTMTLQVCLMNDDSLLQV--HAGGLRHIKADKRINEWRTPGRKQISKCTCNSKQV 553
Query: 320 LCA-TGCDVYYLEVHGS----EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAV 374
+ A TG +V Y E+ + E+++L ++AC+DI+P+ +++ A+
Sbjct: 554 VIALTGGEVIYFELDSAGQLIEVEKLETNG---DIACVDIAPVPEGAL-----RSRFLAM 605
Query: 375 GLWTDISARLLSLPS---LEEVCKEPLGGEIIPRSILM------TCFEGHCYLLVALGDG 425
G + D + R++SL S L+ + + L G P S+L+ +G L V + +G
Sbjct: 606 GSY-DGTVRVMSLNSDDCLQTLAVQALKGST-PSSLLILQTAGTESLQGSLLLNVGMANG 663
Query: 426 SMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFS 485
+ +LD SG+L+D + LGT+ L + + A S RP + YS V S
Sbjct: 664 VLMRATLDQVSGQLSDMRVRFLGTRAPKLVRTSVRGESALVALSSRPWLGYSEKGTFVLS 723
Query: 486 NVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQE 544
++ + +CS ++E+ P+ + ++ T +++ + + H T+ L PR ++
Sbjct: 724 PISYVALEEVCSFSSEACPEGVVAISNQTLRIASVERLGENFHQTTIKLRYTPRAMSANP 783
Query: 545 SSQTFGVI 552
++ +I
Sbjct: 784 DTKMVALI 791
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
C + +++A D I VGD+ S+ ++YK EGS + D P +MT+ LD
Sbjct: 932 CGYRGHLLAXXXXXXXDRIYVGDVQESIHFVKYKADEGSMYIFADDTKPAYMTAALPLDF 991
Query: 1179 ELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
+ GA+ N+F+ + KD + DED T
Sbjct: 992 DTLAGADKFGNIFVNRLPKDISEDMDEDPT 1021
>gi|313235544|emb|CBY10999.1| unnamed protein product [Oikopleura dioica]
Length = 1185
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 216/491 (43%), Gaps = 49/491 (9%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G LF + LE EE + V E +++ + + L L G +FV G+
Sbjct: 301 FLLQTEQGDLFKVTLETEEDI-----VTEIRLKYFDTVPVSSSLCVLRTGFLFVAGEFGN 355
Query: 142 SQLVKLNR-------------SPDENGTY----------VSVMESFTNLAPIIDMVVVDL 178
L ++ R P E G +++ + +L+P+++ V DL
Sbjct: 356 HNLYQITRLGEDDDEPEFSSAEPLEEGETFFFTPRGLRNLALTDEMDSLSPVLNCEVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +LR++R+G+ + E A +LPG +W + + + D+ ++
Sbjct: 416 ANEDTPQLYVTCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKTSADADHDSYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T G + ++Q+ P I S R
Sbjct: 476 VSFVNATLVLSI-GETVEEITDSGFLGTTPTLSSGLMGEDALVQIYPEGIRHI--RSDRR 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDI 354
V+ W P+ K I +CN+ QV+ A TG ++ Y E+ G + R E+ LD+
Sbjct: 533 VNEWRAPDRKQIVRCACNRQQVVIALTGGEIVYFEMDPTGQLNEYTERREFGSEIIALDV 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGE---IIPRSILMTC 411
+ E + + AVGL +D + R++SL + C +P + +P+ + +T
Sbjct: 593 GDVPAGE-----QRCRFLAVGL-SDGTVRIISLDPND--CLQPRTMQALPTVPQDVAITE 644
Query: 412 FEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDR 471
+G L + L +G + ++D +G ++D + LGT+ L + +V A S R
Sbjct: 645 HKGQYVLQIGLQNGVLLRTTIDSVTGEISDTRTRYLGTKAVKLYKVVTEGENSVLAVSSR 704
Query: 472 PTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKL--HIR 529
+ Y + + ++ ++ ++E P+ + +T ++++ + +R
Sbjct: 705 SWLSYRHQQRFHLTPLSYEALDSATGFSSEQCPEGIVAIAGNTLRILALEKLGAVFNQVR 764
Query: 530 TVPLGEAPRRI 540
PL PR+
Sbjct: 765 N-PLQLTPRKF 774
>gi|312072035|ref|XP_003138882.1| hypothetical protein LOAG_03297 [Loa loa]
gi|307765956|gb|EFO25190.1| hypothetical protein LOAG_03297 [Loa loa]
Length = 1197
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 220/509 (43%), Gaps = 54/509 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G +F + LE E + V E K++ I + + L G +F S G+
Sbjct: 302 FLVQTDQGDIFKVTLESEHDI-----VTELKIKYFDTIPVSNAMCILKTGFLFTASEFGN 356
Query: 142 SQLVKLNRSPDENG-----------------------TYVSVMESFTNLAPIIDMVVVDL 178
L ++ DE+ T ++V++ +L+P+I + DL
Sbjct: 357 HHLYQIAHLGDEDDEPEFSSRMQLEEGETFFFAPRGLTNLAVVDQMDSLSPLISSYIDDL 416
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ Q+ T G +++++RNG+ + E A +LPG +W + D+ +V
Sbjct: 417 ANEDSPQIYTLIGRGALSAVKVLRNGLEVTEMAVSELPGNPNAVWTVKRNIDDKFDSHIV 476
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + +LQV P I + R
Sbjct: 477 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLGCALIGDDALLQVYPDGIRHIRADR--R 533
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYY--LEVHGSEIKQLAHRALEYEVACLDI 354
V+ W+ P ++I + N+ QV A G ++ Y L+V G + R L +V C+ +
Sbjct: 534 VNEWKAPGKRTIMKCALNRRQVAIALAGGELVYFELDVTGQLNEYTERRELPADVLCMSL 593
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRS----ILMT 410
S + E +++ VGL D + R++SL + C PL + +P I++
Sbjct: 594 SEIPEGEL-----RSRFLTVGL-ADKTVRIISLDPQD--CLSPLSMQALPSEPESIIVLE 645
Query: 411 CF------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
F +L + L +G + ++D +G LTD + LGT+ L R S
Sbjct: 646 MFGTETQSASTVHLNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTKSVKLFHVRIQSKDA 705
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
+ A S R ++Y + + ++ + ++E P+ + ++T +++++
Sbjct: 706 IMAASSRAWLLYDYQSRFHLTPLSYAALEFAAGFSSEQCPEGIVAIAENTLRILSLEKLG 765
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVI 552
+ V PL PRR+ ++S +I
Sbjct: 766 AVFNHVVHPLDYTPRRMVVHKASGNLIII 794
>gi|334313376|ref|XP_003339894.1| PREDICTED: splicing factor 3B subunit 3-like [Monodelphis
domestica]
Length = 1202
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 123/519 (23%), Positives = 216/519 (41%), Gaps = 61/519 (11%)
Query: 82 YLLGDLA-GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
+ LG G +F + LE +E M V E +++ + + + L G +FV S G
Sbjct: 284 FFLGQTGQGDIFQITLETDENM----GVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFG 339
Query: 141 DSQLVKLNR--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVD 177
+ L ++ DE + S M + +L+PI+ + D
Sbjct: 340 NHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIAD 399
Query: 178 LERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTL 236
L + QL G SLR++R+G+ + E A +LPG +W + D +
Sbjct: 400 LANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYI 459
Query: 237 VLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKA 296
++SFV T VL++ G VEE GF T C + ++QV P I +
Sbjct: 460 IVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK-- 516
Query: 297 RVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLD 353
RV+ W+ P K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+
Sbjct: 517 RVNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMS 576
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE 413
++ + E +++ AVGL D + R++SL + C +PL + +P C
Sbjct: 577 LANVPPGEQ-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIV 628
Query: 414 -----------------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKT 456
G YL + L +G + LDP +G L+D + LG++P L
Sbjct: 629 EMGGAEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFR 688
Query: 457 FRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFT 516
R V A S R + YS + + ++ + +E P+ + + +T
Sbjct: 689 VRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLR 748
Query: 517 FGTIDEIQKLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
++++ + + PL PR+ S +I T
Sbjct: 749 ILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIET 787
Score = 50.1 bits (118), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F + ++VL N ++ Y
Sbjct: 857 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGDDWYVLVGVAKDLILNPRSVAGGFVYTY 913
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
+ G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 914 KLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 973
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 974 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 1032
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1033 DKFGNICVVRLPPNTNDEVDEDPT 1056
>gi|432863837|ref|XP_004070177.1| PREDICTED: splicing factor 3B subunit 3-like [Oryzias latipes]
Length = 1146
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 218/511 (42%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E+M V E +++ I + + L G +FV S G+ L ++
Sbjct: 308 GDIFKVTLETDEEM-----VTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM-----ESF----------------TNLAPIIDMVVVDLERQGQGQ 185
DE + S M ++F N++PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENMSPIMSCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G + +LR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPKSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--------- 412
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGVEKQ 651
Query: 413 --------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGEKGTMGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ + +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPETNNLVLIET 802
>gi|223647430|gb|ACN10473.1| Splicing factor 3B subunit 3 [Salmo salar]
Length = 1217
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 218/511 (42%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E+M V E +++ I + + L G +FV S G+ L ++
Sbjct: 308 GDIFKVTLETDEEM-----VTEIRMKYFDTIPVATSMCVLKTGFLFVSSEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM-----ESF----------------TNLAPIIDMVVVDLERQGQGQ 185
DE + S M ++F NL+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G + +LR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPKSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGVEKE 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGVKGTVGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ + +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPETNNLILIET 802
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Query: 1022 QLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDG----KLQQI 1077
QL E A S+ +F ++VL N G I+ Y G KL+ +
Sbjct: 881 QLEQNEAAFSVTVCRFASGGEDWYVLVGVARDMILNPRSVGGGFIYTYRLGGGGDKLEFM 940
Query: 1078 AEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDF 1136
+ ++ ++ F G++L + +R+++ +K LR E H N++ + G
Sbjct: 941 HKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTI-GQR 999
Query: 1137 ILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ-- 1194
++V D+ SL ++YK E + D +P W+T+ +LD + A+ N+ I +
Sbjct: 1000 VIVTDVQESLFWVRYKRNENQLIIFADDTHPRWVTTACLLDYDTMASADKFGNISIVRLP 1059
Query: 1195 KDSAATSDEDRT 1206
+++ DED T
Sbjct: 1060 PNTSDDVDEDPT 1071
>gi|327286386|ref|XP_003227911.1| PREDICTED: splicing factor 3B subunit 3-like [Anolis carolinensis]
Length = 1217
Score = 133 bits (334), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGAEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 48.5 bits (114), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ QL E A S+ +F + + VL N ++ Y
Sbjct: 872 IQGNTLDLV---QLEQNEAAFSVAVCRFANTGDDWHVLVGVAKDLILNPRSVAGGFVYTY 928
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 929 KLVNNGEKLEFMHKTPVEEVPAAIAPFQGRILIGVGKLLRVYDLGKKKLLRKCENKHIAN 988
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I ++ G ++V D+ S ++YK E + D +P W+T+ +LD + GA
Sbjct: 989 YIC-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTHPRWVTTACLLDYDTVAGA 1047
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1048 DKFGNICVVRLPPNTNDEVDEDPT 1071
>gi|332263858|ref|XP_003280968.1| PREDICTED: splicing factor 3B subunit 3 [Nomascus leucogenys]
Length = 1271
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 362 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 416
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 417 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 476
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 477 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 536
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 537 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 593
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 594 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 653
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 654 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 705
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 706 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 765
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 766 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 825
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 826 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 856
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F ++VL N ++ Y
Sbjct: 926 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 982
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 983 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 1042
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 1043 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 1101
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1102 DKFGNICVVRLPPNTNDEVDEDPT 1125
>gi|224064143|ref|XP_002188384.1| PREDICTED: splicing factor 3B subunit 3 [Taeniopygia guttata]
Length = 1217
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 48.9 bits (115), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F + ++VL N ++ Y
Sbjct: 872 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGDEWYVLVGVAKDLILNPRSVAGGFVYTY 928
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
+ G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 929 KLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 988
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 989 YIC-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGA 1047
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1048 DKFGNICVVRLPPNTNDEVDEDPT 1071
>gi|37359734|dbj|BAC97845.1| mKIAA0017 protein [Mus musculus]
Length = 1122
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 -----QRSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 49.3 bits (116), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLK 1131
KL+ + + ++ ++ F G++L + +R+++ +K LR E H N I+ ++
Sbjct: 841 KLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYIS-GIQ 899
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
G ++V D+ S ++YK E + D P W+T+ +LD + GA+ N+
Sbjct: 900 TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 959
Query: 1192 ICQ--KDSAATSDEDRT 1206
+ + ++ DED T
Sbjct: 960 VVRLPPNTNDEVDEDPT 976
>gi|158256968|dbj|BAF84457.1| unnamed protein product [Homo sapiens]
Length = 1217
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F ++VL N ++ Y
Sbjct: 872 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 928
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 929 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 988
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 989 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 1047
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1048 DKFGNICVVRLPPNTNDEVDEDPT 1071
>gi|40788938|dbj|BAA32662.2| KIAA0017 protein [Homo sapiens]
Length = 1253
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 344 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 398
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 399 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 458
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 459 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 518
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 519 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 575
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 576 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 635
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 636 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 687
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 688 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 747
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 748 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 807
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 808 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 838
Score = 50.1 bits (118), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F ++VL N ++ Y
Sbjct: 908 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 964
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 965 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 1024
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 1025 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 1083
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1084 DKFGNICVVRLPPNTNDEVDEDPT 1107
>gi|348503892|ref|XP_003439496.1| PREDICTED: splicing factor 3B subunit 3-like [Oreochromis
niloticus]
Length = 1217
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 217/511 (42%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E+M V E +++ I + + L G +FV S G+ L ++
Sbjct: 308 GDIFKVTLETDEEM-----VTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM-----ESF----------------TNLAPIIDMVVVDLERQGQGQ 185
D+ + S M ++F NL+PI+ + DL + Q
Sbjct: 363 HLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +LR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-ADNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGVEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGDKGTIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ + +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPETNNLILIET 802
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 85/192 (44%), Gaps = 8/192 (4%)
Query: 1022 QLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY----DDGKLQQI 1077
QL E A S+ + +F + ++VL N G I+ Y KL+ +
Sbjct: 881 QLEQNEAAFSVAACRFTNTGDDWYVLVGVARDMILNPRSVGGGFIYTYRLVSGGEKLEFV 940
Query: 1078 AEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDF 1136
+ ++ ++ F G+ L + +R+++ +K LR E H N++ + G
Sbjct: 941 HKTPVEDVPLAIAPFQGRALVGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTI-GQR 999
Query: 1137 ILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ-- 1194
++V D+ SL ++Y+ E + D P W+T+ +LD + A+ N+ I +
Sbjct: 1000 VIVSDVQESLFWVRYRRNENQLIIFADDTYPRWVTTACLLDYDTMAAADKFGNISIVRLP 1059
Query: 1195 KDSAATSDEDRT 1206
+++ DED T
Sbjct: 1060 PNTSDDVDEDPT 1071
>gi|54112121|ref|NP_036558.3| splicing factor 3B subunit 3 [Homo sapiens]
gi|118150814|ref|NP_001071319.1| splicing factor 3B subunit 3 [Bos taurus]
gi|296231541|ref|XP_002761182.1| PREDICTED: splicing factor 3B subunit 3 isoform 2 [Callithrix
jacchus]
gi|332846357|ref|XP_511081.3| PREDICTED: splicing factor 3B subunit 3 [Pan troglodytes]
gi|397518709|ref|XP_003829523.1| PREDICTED: splicing factor 3B subunit 3 [Pan paniscus]
gi|402908991|ref|XP_003917214.1| PREDICTED: splicing factor 3B subunit 3 [Papio anubis]
gi|403298333|ref|XP_003939977.1| PREDICTED: splicing factor 3B subunit 3 [Saimiri boliviensis
boliviensis]
gi|426382761|ref|XP_004057969.1| PREDICTED: splicing factor 3B subunit 3 [Gorilla gorilla gorilla]
gi|116242787|sp|Q15393.4|SF3B3_HUMAN RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=STAF130; AltName:
Full=Spliceosome-associated protein 130; Short=SAP 130
gi|125987788|sp|A0JN52.1|SF3B3_BOVIN RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|117306205|gb|AAI26519.1| Splicing factor 3b, subunit 3, 130kDa [Bos taurus]
gi|119572190|gb|EAW51805.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_c [Homo sapiens]
gi|168274284|dbj|BAG09562.1| splicing factor 3B subunit 3 [synthetic construct]
gi|296478233|tpg|DAA20348.1| TPA: splicing factor 3B subunit 3 [Bos taurus]
gi|355710371|gb|EHH31835.1| Spliceosome-associated protein 130 [Macaca mulatta]
gi|355756944|gb|EHH60552.1| Spliceosome-associated protein 130 [Macaca fascicularis]
gi|380811142|gb|AFE77446.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|383417057|gb|AFH31742.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|384946118|gb|AFI36664.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|410209986|gb|JAA02212.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
gi|410260956|gb|JAA18444.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
gi|410355121|gb|JAA44164.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
Length = 1217
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F ++VL N ++ Y
Sbjct: 872 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 928
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 929 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 988
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 989 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 1047
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1048 DKFGNICVVRLPPNTNDEVDEDPT 1071
>gi|410297890|gb|JAA27545.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
Length = 1217
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F ++VL N ++ Y
Sbjct: 872 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 928
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 929 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 988
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 989 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 1047
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1048 DKFGNICVVRLPPNTNDEVDEDPT 1071
>gi|326927039|ref|XP_003209702.1| PREDICTED: splicing factor 3B subunit 3-like [Meleagris gallopavo]
gi|363738006|ref|XP_001232348.2| PREDICTED: splicing factor 3B subunit 3 [Gallus gallus]
Length = 1217
Score = 132 bits (333), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVL-GTA---VVHPEENEPKQGRII 1065
I NT +++ Q E A S+ +F ++VL G A +++P G +
Sbjct: 872 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGEEWYVLVGVAKDLILNPRS--VAGGFVY 926
Query: 1066 IFHYDDG--KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHF 1122
+ +G KL+ + + ++ ++ F G++L + +R+++ +K LR E H
Sbjct: 927 TYKLVNGGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHI 986
Query: 1123 NNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFL 1182
N I ++ G ++V D+ S ++YK E + D P W+T+ +LD +
Sbjct: 987 ANYIC-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVA 1045
Query: 1183 GAENSYNLFICQ--KDSAATSDEDRT 1206
GA+ N+ + + ++ DED T
Sbjct: 1046 GADKFGNICVVRLPPNTNDEVDEDPT 1071
>gi|74190887|dbj|BAE28225.1| unnamed protein product [Mus musculus]
Length = 937
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRIKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
>gi|443894313|dbj|GAC71661.1| hypothetical protein PANT_5d00006 [Pseudozyma antarctica T-34]
Length = 1625
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 146/549 (26%), Positives = 228/549 (41%), Gaps = 146/549 (26%)
Query: 122 PECLTYLDNGVVFVGSRLGD-------------------SQLVKLNRSPDEN----GTY- 157
P+ ++YL GVV +GS GD +QL+ SP ++ G++
Sbjct: 680 PQAISYLGEGVVCIGSSTGDTLLHQVVPRDVDEAADPTGAQLISPPSSPTQSRRRSGSFQ 739
Query: 158 ----------------VSVMESFTNLAPIIDMVVVD-------LERQGQGQLVTCSGGFK 194
+ +ES+ NL PI+D VV D Q ++VTCSG
Sbjct: 740 LASSSQGRTELPSAGTLHTIESWQNLGPIVDFVVDDGAGGDPSASSGAQARIVTCSGAGP 799
Query: 195 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--LVLSFVGHTRVL--TLS 250
GS+R +R G ++E + +P + IW + G P T +++ F T L +
Sbjct: 800 SGSIREVRTGASVQEVCTLPIPNAQHIWPVHAG-PTGSKQTSGILVGFATSTAYLYFDVD 858
Query: 251 GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKA---RVS-------- 299
G V+ T D+ C R+ T +A+ L+ A RV+
Sbjct: 859 GNLVDAT-------DRLAAVC-----RSTANPTLAASSLVDESGSALLLRVAHTDFSLFR 906
Query: 300 ----------SWEPPNGKSISVVSCNK--NQVLCATGCDVYYLEVHGSEIKQLAHRALEY 347
W PP+G I+ S N V+ + + YL + + +LE+
Sbjct: 907 CQGGSIALLHQWSPPSGCEITTASANDLGQCVIALSDKSLVYLTAEAESLTERGKTSLEH 966
Query: 348 EVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGE---IIP 404
EV+CLDIS LS E AQ+AA+G W + ++LSLP L V + + + +P
Sbjct: 967 EVSCLDISCLSPGE------PAQIAAIGFWQARTIQILSLPDLSPVGQSSVVQQQLPAVP 1020
Query: 405 RSILMTCFEGH---------------------CYLLVALGDGSMFYFSL----DPASGR- 438
RS+L+ F +LL+ LGDG++ +S+ D + R
Sbjct: 1021 RSLLLHRFASKQTRQGASRQSRTSLRNRDALSPHLLIGLGDGTLITYSVSLPTDESFSRT 1080
Query: 439 --LTDKKKVTLGTQPTVLKTFRSLSTTNVFACS-DRPTVIYSSNHKLVFSNVNLRQVNHM 495
L D K ++LGTQ L + S V A S RPT++++ + + FS L+ +
Sbjct: 1081 VGLFDCKTLSLGTQALKLDAIETSSGARVVAVSGSRPTLVFADSKR--FSYNALQHGDQR 1138
Query: 496 C----------SLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG-EAPRRIAYQE 544
C LNA S DS+ LA ++ +Q+ +RT PLG + P IA
Sbjct: 1139 CVATLYVGAEQVLNAFSLGDSVKLA--------SVGTLQQRDVRTFPLGLDQPLAIAQWP 1190
Query: 545 SSQTFGVIT 553
+ Q F V T
Sbjct: 1191 ARQAFAVCT 1199
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 25/209 (11%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSL-ISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIF 1067
I+DQ TFE+L +L P E + + +G + V+GT + + E GR++ F
Sbjct: 1220 ILDQTTFEVLDEIRLEPDERPNCIAVLHAYGTE---MLVIGTGYIDSQSQETVSGRLVGF 1276
Query: 1068 HY---------DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK----- 1113
+ G+L+++ E + G YS+ +L A++NS V+++ + +
Sbjct: 1277 DVSPGSSRTKEERGRLRRLFEHDENGNVYSVQSIGNRLAAAVNSEVKIYSVIDPRRGDAS 1336
Query: 1114 ----ELRLECSHFNNIIALFLKV-KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPN 1168
+++ S ++ IA L V + D I+VGD +RS+ +L EI+RD +P
Sbjct: 1337 SPKIKIKQRGSWASSFIACSLSVVEPDRIVVGDALRSMNVLHVHPQTARVSEIARDCDPF 1396
Query: 1169 WMTSIEILDD--ELFLGAENSYNLFICQK 1195
W ++ E+LDD + ++GA+ S+NL+ Q+
Sbjct: 1397 WTSATELLDDASQTYIGADISFNLYTTQR 1425
>gi|19527174|ref|NP_598714.1| splicing factor 3B subunit 3 [Mus musculus]
gi|297207121|ref|NP_001099657.2| splicing factor 3B subunit 3 [Rattus norvegicus]
gi|354477789|ref|XP_003501101.1| PREDICTED: splicing factor 3B subunit 3 [Cricetulus griseus]
gi|81879817|sp|Q921M3.1|SF3B3_MOUSE RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|15030278|gb|AAH11412.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|26353236|dbj|BAC40248.1| unnamed protein product [Mus musculus]
gi|27503728|gb|AAH42580.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|148679525|gb|EDL11472.1| splicing factor 3b, subunit 3 [Mus musculus]
gi|187951307|gb|AAI39016.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|187954163|gb|AAI39017.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|344248014|gb|EGW04118.1| Splicing factor 3B subunit 3 [Cricetulus griseus]
Length = 1217
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 48.9 bits (115), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLK 1131
KL+ + + ++ ++ F G++L + +R+++ +K LR E H N I+ ++
Sbjct: 936 KLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYIS-GIQ 994
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
G ++V D+ S ++YK E + D P W+T+ +LD + GA+ N+
Sbjct: 995 TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 1054
Query: 1192 ICQ--KDSAATSDEDRT 1206
+ + ++ DED T
Sbjct: 1055 VVRLPPNTNDEVDEDPT 1071
>gi|6006515|emb|CAB56791.1| spliceosomal protein SAP 130 [Homo sapiens]
Length = 1217
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F ++VL N ++ Y
Sbjct: 872 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 928
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 929 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 988
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 989 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 1047
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1048 DKFGNICVVRLPPNTNDEVDEDPT 1071
>gi|432114152|gb|ELK36185.1| Splicing factor 3B subunit 3 [Myotis davidii]
Length = 1217
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F ++VL N ++ Y
Sbjct: 872 IQGNTLDLVQLEQ---NEAAFSVAVCRFANTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 928
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 929 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 988
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 989 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 1047
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1048 DKFGNICVVRLPPNTNDEVDEDPT 1071
>gi|46362557|gb|AAH68974.1| Splicing factor 3b, subunit 3, 130kDa [Homo sapiens]
Length = 1217
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F ++VL N ++ Y
Sbjct: 872 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 928
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 929 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 988
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 989 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 1047
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1048 DKFGNICVVRLPPNTNDEVDEDPT 1071
>gi|73957045|ref|XP_536791.2| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Canis lupus
familiaris]
gi|149699332|ref|XP_001500880.1| PREDICTED: splicing factor 3B subunit 3 [Equus caballus]
gi|301771131|ref|XP_002920989.1| PREDICTED: splicing factor 3B subunit 3-like [Ailuropoda
melanoleuca]
gi|344290794|ref|XP_003417122.1| PREDICTED: splicing factor 3B subunit 3-like [Loxodonta africana]
gi|410983914|ref|XP_003998280.1| PREDICTED: splicing factor 3B subunit 3 [Felis catus]
gi|426242169|ref|XP_004014947.1| PREDICTED: splicing factor 3B subunit 3 [Ovis aries]
gi|417406150|gb|JAA49749.1| Putative damage-specific dna binding complex subunit ddb1 [Desmodus
rotundus]
gi|431912451|gb|ELK14585.1| Splicing factor 3B subunit 3 [Pteropus alecto]
Length = 1217
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F + ++VL N ++ Y
Sbjct: 872 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGDDWYVLVGVAKDLILNPRSVAGGFVYTY 928
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 929 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 988
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 989 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 1047
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1048 DKFGNICVVRLPPNTNDEVDEDPT 1071
>gi|395836972|ref|XP_003791420.1| PREDICTED: splicing factor 3B subunit 3 [Otolemur garnettii]
Length = 1217
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 49.7 bits (117), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F ++VL N ++ Y
Sbjct: 872 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGEEWYVLVGVAKDLILNPRSVAGGFVYTY 928
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 929 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 988
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 989 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 1047
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1048 DKFGNICVVRLPPNTNDEVDEDPT 1071
>gi|109129162|ref|XP_001107025.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Macaca
mulatta]
gi|297284421|ref|XP_002802591.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Macaca
mulatta]
Length = 1199
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 290 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 344
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 345 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 404
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 405 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 464
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 465 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 521
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 522 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 581
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 582 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 633
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 634 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 693
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 694 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 753
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 754 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 784
Score = 49.7 bits (117), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F ++VL N ++ Y
Sbjct: 854 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 910
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 911 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 970
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 971 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 1029
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1030 DKFGNICVVRLPPNTNDEVDEDPT 1053
>gi|388853409|emb|CCF53029.1| related to UV-damaged DNA-binding protein [Ustilago hordei]
Length = 1508
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 230/541 (42%), Gaps = 103/541 (19%)
Query: 109 KEPKVELLGEISIP---ECLTYLDNGVVFVGSRLGDSQLVKL------------------ 147
K +VE LG S P + L+YL +G+V VGS GDS L K+
Sbjct: 547 KSMRVETLGTTSQPAGPQALSYLGDGLVCVGSATGDSCLYKILQQDTSEEMDTGPGAQLL 606
Query: 148 ------------------NRSPDEN----GTYVSVMESFTNLAPIIDMVVVD-------L 178
N +P G + +E++ NL P++D V D
Sbjct: 607 SPPSSPTQSRRRRSSLAANTTPKSTELPCGGSLVTIETWQNLGPVVDFTVDDGAGGDPTT 666
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT-LV 237
Q ++VTCSG GS+R +R+G +++ + + +P + IW++ G + L+
Sbjct: 667 SASAQARIVTCSGAGPSGSIREVRSGASVQDVSSLPIPNAQQIWSVEAGDATSKQTAGLL 726
Query: 238 LSFVGHTRVL------TLSGAEVEETEMGGFTS----DQQTFYCGNVDPRTVLQVTPSAA 287
+ F T L L+ A + +G T+ T + + P +++V AA
Sbjct: 727 IGFATSTAYLHFDANGNLADATDRLSAVGVDTTLPTLTASTVFDASQGP-LLVRVAKDAA 785
Query: 288 ILISTESKAR--VSSWEPPNGKSISVVSCNK--NQVLCATGCDVYYLEVHGSEIKQLAHR 343
L++ + +A V W+P G I+ S N V+ ++ + YL V + +
Sbjct: 786 SLVNLQDEAATLVQQWKPSAGLEITTASVNPYGQLVIASSDKSLSYLVVEEGALIERNKI 845
Query: 344 ALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPL---GG 400
L++EV+CLD S ++ + AQ AA G W S ++ +LP L V + + G
Sbjct: 846 QLDHEVSCLDTSSVTAGQA------AQFAACGFWQTRSIQIFALPELAPVGESLVVQQGF 899
Query: 401 EIIPRSILMTCFEGH-------------------CYLLVALGDGSMFYFSL----DPASG 437
+PRSIL+ F +LL+ LGDG++ FSL D +
Sbjct: 900 AAVPRSILLHRFASKQSEASSQTKSSVGNRDALMPHLLIGLGDGTLVSFSLSLPRDDSYS 959
Query: 438 R---LTDKKKVTLGTQPTVLKTFRSLSTTNVFACS-DRPTVIYSSNHKLVFSNVNLRQVN 493
+ L+D K V+LG Q L S + V A S RPT++Y+ + + ++ + +
Sbjct: 960 KIVGLSDCKTVSLGKQALKLDAIESWAGARVVAVSGSRPTLVYADSKRFSYNALKHKSQR 1019
Query: 494 HMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG-EAPRRIAYQESSQTFGVI 552
+ L+ A A + +I +++ IRT PLG + P IA + + F V
Sbjct: 1020 SVTMLHVGPGRVLGAFALAESVELASIGALRQRDIRTFPLGLDQPLAIAQWPNRKVFAVC 1079
Query: 553 T 553
T
Sbjct: 1080 T 1080
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 105/211 (49%), Gaps = 28/211 (13%)
Query: 1009 IIDQNTFEILHAHQLFPGEY--ALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIII 1066
I+DQ+TFE L +L E ++++ ++ E V+GT + E+E GR++
Sbjct: 1101 ILDQSTFETLDEFRLEVDERPNCITVLRAQGHE----MLVVGTGYISDGEHEVISGRLLG 1156
Query: 1067 FHY---------DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKEL-- 1115
F + G+L+++ KE G YS+ N +L ++NS V+++ + +
Sbjct: 1157 FDVSAGSIRGKEERGRLRKLFVKEQAGNVYSVQSINNRLATAVNSEVKIYSVVDPRASDE 1216
Query: 1116 ----RLECSHFNNIIALFLK-----VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYN 1166
R+ + F+ V+ D I+VGD +RS+ +L EI+RD +
Sbjct: 1217 VSAPRINVVQRGSWACSFIACNLSVVEPDQIVVGDALRSINVLHVHPYTARLTEIARDCD 1276
Query: 1167 PNWMTSIEILDD--ELFLGAENSYNLFICQK 1195
P W ++ E+LD+ + ++GA+ S+NL+ Q+
Sbjct: 1277 PFWTSATELLDEASQTYIGADISFNLYTTQR 1307
>gi|197101659|ref|NP_001125500.1| splicing factor 3B subunit 3 [Pongo abelii]
gi|75042033|sp|Q5RBI5.1|SF3B3_PONAB RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|55728259|emb|CAH90875.1| hypothetical protein [Pongo abelii]
Length = 1217
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSETAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F ++VL N ++ Y
Sbjct: 872 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 928
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 929 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 988
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 989 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 1047
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1048 DKFGNICVVRLPPNTNDEVDEDPT 1071
>gi|149640712|ref|XP_001506454.1| PREDICTED: splicing factor 3B subunit 3 [Ornithorhynchus anatinus]
gi|395508661|ref|XP_003758628.1| PREDICTED: splicing factor 3B subunit 3 [Sarcophilus harrisii]
Length = 1217
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGAEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F + ++VL N ++ Y
Sbjct: 872 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGDDWYVLVGVAKDLILNPRSVAGGFVYTY 928
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
+ G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 929 KLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 988
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 989 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 1047
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 1048 DKFGNICVVRLPPNTNDEVDEDPT 1071
>gi|198420618|ref|XP_002125906.1| PREDICTED: similar to Splicing factor 3B subunit 3
(Spliceosome-associated protein 130) (SAP 130)
(Pre-mRNA-splicing factor SF3b 130 kDa subunit)
(SF3b130) (STAF130) [Ciona intestinalis]
Length = 1216
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 226/518 (43%), Gaps = 63/518 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G +F + LE +E M V E +++ + + + L G +FV + +G+
Sbjct: 301 FLIQTEQGDIFKVTLETDEDM-----VTEIRLKYFDTVPVSMAMCVLRTGFLFVAAEMGN 355
Query: 142 SQLVKLNR--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDL 178
L ++ D+ + S M + +L+PI+ ++ DL
Sbjct: 356 HCLYQIAHLGDDDDETEFSSAMPLEEGDTFFYAPRALRNLVLVDELDSLSPIMTCLISDL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G SLR++R+G+ + E A +LPG +W + I + D+ ++
Sbjct: 416 ANEDTPQLYVTCGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKIKEEEEFDSYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I + R
Sbjct: 476 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLSCSLLGENALVQVYPDGIRHIRADK--R 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDI 354
V+ W+ P K+I + N+ QV+ A TG ++ Y E+ S ++ + R + EV C+D+
Sbjct: 533 VNEWKTPGKKTILRCAVNQRQVVIALTGGELVYFEMDQSGQLNEYTERKEMNSEVVCMDL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
S + E + + AVGL D + R++SL + C +PL + +P + C
Sbjct: 593 SKVPPTE-----QRTRFLAVGL-ADNTVRIISLDPTD--CLQPLSMQALPATPESVCIIE 644
Query: 413 -------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
G L + L +G + +LD +G L+D + LGT+ +K FR
Sbjct: 645 IGGGEDETGAQKASGGLVLNIGLQNGVLLRTTLDNVTGDLSDTRTRYLGTR--AVKLFRV 702
Query: 460 LS--TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTF 517
L+ + V A S R + Y ++ + ++ + +E P+ + + +T
Sbjct: 703 LTQGSDAVLAMSSRTWLSYQHQNRFHLTPLSYESLEFASGFASEQCPEGIVAISANTLRI 762
Query: 518 GTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITT 554
++++ + + + L PRR A S ++ T
Sbjct: 763 LALEKLGTVFNQASTGLQYTPRRFAIHYDSGNVIILET 800
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 1027 EYALSLISSKFGEDPNTYFVL-GTA---VVHPEENEPKQGRIIIFHYDD--GKLQQIAEK 1080
E ALS+ KF + + FVL G A +++P + G I + ++ KL+ + +
Sbjct: 884 EAALSIAICKFPNNSDDTFVLVGVACELLINPRQAR-GGGEIHTYKINEEGNKLELVHKT 942
Query: 1081 EIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILV 1139
+ ++C + G++L + +R+++ +K LR E H N IA V G I+V
Sbjct: 943 VVDEVPSAICPYQGRVLIGVGKLLRIYDLGKKKLLRKCENKHIPNYIASIQAV-GHRIIV 1001
Query: 1140 GDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILD 1177
D+ S+ ++Y+ E + D P W+TS +LD
Sbjct: 1002 CDVQESVHWVRYRRHENQLVVFADDTYPRWVTSATVLD 1039
Score = 41.6 bits (96), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 3 SLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
SLR++R+G+ + E A +LPG +W + I + D+ +++SFV T VL++
Sbjct: 434 SLRVLRHGLEVSEMAVSELPGNPNAVWTVKIKEEEEFDSYIIVSFVNATLVLSI 487
>gi|449282569|gb|EMC89402.1| Splicing factor 3B subunit 3 [Columba livia]
Length = 1225
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 211/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ G + + + +V C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPVGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 19/212 (8%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F + ++VL N ++ Y
Sbjct: 872 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGDEWYVLVGVAKDLILNPRSVAGGFVYTY 928
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR--------- 1116
+ G KL+ + + ++ ++ F G++L + +R+++ +K LR
Sbjct: 929 KLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKILSF 988
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
L H N I ++ G ++V D+ S ++YK E + D P W+T+ +L
Sbjct: 989 LSQKHIANYIC-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLL 1047
Query: 1177 DDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
D + GA+ N+ + + ++ DED T
Sbjct: 1048 DYDTVAGADKFGNICVVRLPPNTNDEVDEDPT 1079
>gi|326676028|ref|XP_002667683.2| PREDICTED: splicing factor 3B subunit 3-like [Danio rerio]
gi|123888555|sp|Q1LVE8.1|SF3B3_DANRE RecName: Full=Splicing factor 3B subunit 3
Length = 1217
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 217/511 (42%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E+M V E +++ I + + L G +FV S G+ L ++
Sbjct: 308 GDIFKVTLETDEEM-----VTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM-----ESF----------------TNLAPIIDMVVVDLERQGQGQ 185
DE + S M ++F +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQESLSPIMSCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +LR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIIRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGVEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGEKGTIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ + +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPETNNLILIET 802
Score = 49.3 bits (116), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ QL E A S+ +F + ++VL N G I+ Y
Sbjct: 872 IQGNTLDLV---QLEQNEAAFSVAICRFLNGGDDWYVLVGVARDMILNPRSVGGGYIYTY 928
Query: 1070 ----DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 929 RIVGGGDKLEFLHKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENKHVPN 988
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
++ + G ++V D+ SL ++Y+ E + D P W+T+ +LD + A
Sbjct: 989 LVTGIHTI-GQRVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASA 1047
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + +++ DED T
Sbjct: 1048 DKFGNICVVRLPPNTSDDVDEDPT 1071
>gi|355718834|gb|AES06402.1| splicing factor 3b, subunit 3, 130kDa [Mustela putorius furo]
Length = 1101
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 212/511 (41%), Gaps = 58/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 252 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 306
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 307 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 366
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 367 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 426
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 427 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 483
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 484 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 543
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
S + AVGL D + R++SL + C +PL + +P C
Sbjct: 544 QRSR--FLAVLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQ 598
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 599 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 658
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + +E P+ + + +T ++++
Sbjct: 659 VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 718
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 719 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 749
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F + ++VL N ++ Y
Sbjct: 819 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGDDWYVLVGVAKDLILNPRSVAGGFVYTY 875
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 876 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 935
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 936 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 994
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 995 DKFGNICVVRLPPNTNDEVDEDPT 1018
>gi|197246825|gb|AAI68883.1| Sf3b3 protein [Rattus norvegicus]
Length = 908
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 212/509 (41%), Gaps = 61/509 (11%)
Query: 91 LFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNR- 149
+F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 1 IFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHL 55
Query: 150 -SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQLV 187
DE + S M + +L+PI+ + DL + QL
Sbjct: 56 GDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQLY 115
Query: 188 TCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTRV 246
G SLR++R+G+ + E A +LPG +W + D +++SFV T V
Sbjct: 116 VACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLV 175
Query: 247 LTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNG 306
L++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 176 LSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTPGK 232
Query: 307 KSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEETS 363
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 233 KTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ- 291
Query: 364 SEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE---------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 292 ----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQDE 344
Query: 414 -------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVF 466
G YL + L +G + LDP +G L+D + LG++P L R V
Sbjct: 345 LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 404
Query: 467 ACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKL 526
A S R + YS + + ++ + +E P+ + + +T ++++ +
Sbjct: 405 AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 464
Query: 527 HIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ PL PR+ S +I T
Sbjct: 465 FNQVAFPLQYTPRKFVIHPESNNLIIIET 493
Score = 48.5 bits (114), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLK 1131
KL+ + + ++ ++ F G++L + +R+++ +K LR E H N I+ ++
Sbjct: 627 KLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYIS-GIQ 685
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
G ++V D+ S ++YK E + D P W+T+ +LD + GA+ N+
Sbjct: 686 TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 745
Query: 1192 ICQ--KDSAATSDEDRT 1206
+ + ++ DED T
Sbjct: 746 VVRLPPNTNDEVDEDPT 762
>gi|301604148|ref|XP_002931705.1| PREDICTED: splicing factor 3B subunit 3 [Xenopus (Silurana)
tropicalis]
Length = 1217
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 215/511 (42%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM-----ESF----------------TNLAPIIDMVVVDLERQGQGQ 185
D+ + S M ++F +L+PI+ + DL + Q
Sbjct: 363 HLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQDSLSPIMSCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEYDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKIIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPEALCIVEMGGAERQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIET 802
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ QL E A S+ +F + ++VL N +++ Y
Sbjct: 872 IQGNTLDLV---QLEQNEAAFSVAVCRFTNTGDDWYVLVGVAKDLILNPRSVAAGLVYTY 928
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H +N
Sbjct: 929 KLVNNGEKLEFVHKTPVEEVPAAIAPFQGRVLIGVGKLLRIYDLGKKKLLRKCENKHISN 988
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I + ++ G +++ D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 989 FI-VGIQTIGQRVILSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTSCLLDYDTVAGA 1047
Query: 1185 ENSYNLFICQKDSAATSDED 1204
+ N+ I + S D D
Sbjct: 1048 DKFGNICIVRLPSNTNDDVD 1067
>gi|91092128|ref|XP_972649.1| PREDICTED: similar to AGAP005549-PA [Tribolium castaneum]
gi|270004662|gb|EFA01110.1| hypothetical protein TcasGA2_TC010322 [Tribolium castaneum]
Length = 1219
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 128/519 (24%), Positives = 217/519 (41%), Gaps = 76/519 (14%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E K++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIKLKYFDTVPVASAMCVLKTGFLFVTSEFGNHYLYQIA 362
Query: 149 RSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDLERQGQGQ 185
D E T+ S NL +PI+ V DL + Q
Sbjct: 363 HLGDDDDELEFSSAMPLEEGDTFFFAPRSLRNLVLVDEMESLSPILSCRVADLAGEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + S D +++SFV T
Sbjct: 423 LYMLCGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRSDDEYDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I S RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSALSDDALVQVYPGGIRHIC--SDKRVNEWKAP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A +G ++ Y E+ + ++ + R + +V C+ ++ ++ E
Sbjct: 540 GKKTIVKCAINQRQVVIALSGGELAYFEMDPTGQLHEYKERKRMNADVVCMALANVAPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSI--LMTCFEGHC--- 416
S AVGL D + R++SL + C + PRSI L C E C
Sbjct: 600 QLS-----LFLAVGL-ADSTVRIISLDPSD--C-------LAPRSIQGLPVCAESLCIVE 644
Query: 417 --------------------YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKT 456
YL + L +G++ LDP SG L+D + LG++P L
Sbjct: 645 MGCTDREPDNAAAASTTSTLYLNIGLTNGALLRNVLDPVSGELSDTRTRYLGSRPVKLFR 704
Query: 457 FRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFT 516
R + V A S R + Y + + ++ + + ++E P+ + + +T
Sbjct: 705 IRMQQSEAVLAMSSRSWLSYYYQSRFYLTPLSYESLEYASGFSSEQCPEGIVAISTNTLR 764
Query: 517 FGTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITT 554
++++ + + + PL PR+ S +I T
Sbjct: 765 ILALEKLGAVFNQVSFPLEYTPRKFIIHPESNNLLIIET 803
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 22/211 (10%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ-- 1061
VH + ++QN E A+S + KF P L + + P+
Sbjct: 877 VHKCIRLEQN-------------EAAMSSVLVKFQNQPQQTLFLIVGISKDFQLNPRHCN 923
Query: 1062 -GRIIIFHYD--DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-L 1117
G + + D +L+ + + ++C +NG LLA + +RL++ +K LR
Sbjct: 924 TGFLDTYKMDPMGRELEFVHRTPVDEVPMALCAYNGLLLAGVGRMLRLYDMGKKKLLRKC 983
Query: 1118 ECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILD 1177
E H N I + ++ G I V D+ S+ +++YK E + D +P W+T +LD
Sbjct: 984 ENKHIPNAI-VNIQAMGKRIFVSDVQESVFMVRYKRAENQLIIFADDTHPRWVTCNCVLD 1042
Query: 1178 DELFLGAENSYNLFICQKDSAATSD--EDRT 1206
+ A+ N+ I + + D ED T
Sbjct: 1043 YDTVAVADKFGNIAILRLPPNVSDDVEEDPT 1073
>gi|410926437|ref|XP_003976685.1| PREDICTED: splicing factor 3B subunit 3-like, partial [Takifugu
rubripes]
Length = 1020
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 211/497 (42%), Gaps = 61/497 (12%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E+M V E +++ I + + L G +FV S G+ L ++
Sbjct: 308 GDIFKVTLETDEEM-----VTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM-----ESF----------------TNLAPIIDMVVVDLERQGQGQ 185
DE + S M ++F +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQESLSPIMSCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +LR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDEALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ G + + + +V C+ ++ + E
Sbjct: 540 GKKTIVRCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--------- 412
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-ADNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGVEKQ 651
Query: 413 --------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGEKGSMGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRI 540
+ + PL PR+
Sbjct: 772 AVFNQVAFPLQYTPRKF 788
Score = 48.9 bits (115), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLK 1131
KL+ + + ++ A ++ F G++L + +R+++ +K LR E H N++ +
Sbjct: 901 KLEFVHKTPVEDAPLAIAPFQGRVLVGVGKLLRIYDMGKKKLLRKCENKHIPNVVT-SIH 959
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
G ++V D+ SL ++Y+ E + D P W+T+ +LD + A+ N+
Sbjct: 960 TSGQRVIVTDVQESLFWVRYRRNENQLIIFADDTYPRWVTTACLLDYDTMASADKFGNIS 1019
Query: 1192 I 1192
I
Sbjct: 1020 I 1020
>gi|260819270|ref|XP_002604960.1| hypothetical protein BRAFLDRAFT_126697 [Branchiostoma floridae]
gi|229290289|gb|EEN60970.1| hypothetical protein BRAFLDRAFT_126697 [Branchiostoma floridae]
Length = 1049
Score = 129 bits (325), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 214/509 (42%), Gaps = 59/509 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E K++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIKLKYFDTVPVATSMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFLFTPRGLKNLVLVDEMDSLSPIMSCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L +G S R++R+G+ + E A +LPG +W + D +V+SFV T
Sbjct: 423 LYVANGRGPRSSFRVLRHGLEVSEMAVSELPGNPNAVWTVKKNVDDEFDAYIVVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + +LQ+ P I S RV+ W P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLIGEDALLQIYPEGIRHI--RSDKRVNEWRTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ G + + + EV C+ ++ + E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSAEVICMALANVPVGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF------EG- 414
+ + AVGL TD + R++SL + C +PL + +P + C EG
Sbjct: 600 -----QRCRFLAVGL-TDDTVRIISLDPAD--CLQPLSMQALPATPESLCILQMGGGEGI 651
Query: 415 --------HCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVF 466
+L + L +G + LD +G L+D + LG++P L + V
Sbjct: 652 DDTGPRNTMLFLNIGLQNGVLLRTVLDQITGDLSDTRTRYLGSRPVKLFQVKMQGNEAVL 711
Query: 467 ACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKL 526
A S R + Y+ ++ + ++ + + +E P+ + + +T ++++ +
Sbjct: 712 AMSSRSWLSYTYQNRFHLTPLSYETLEYASGFASEQCPEGIVAISANTLRILALEKLGAV 771
Query: 527 HIR-TVPLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ S +I T
Sbjct: 772 FNQISTPLMYTPRKFVIDTQSNNIIMIET 800
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 19/231 (8%)
Query: 957 VKEPKVELLGEHCKGPVVEMSSLSYIK---PGSTKQSTANQPADFNMEVEVHNLLIIDQN 1013
+ E VE GE K EM++ ++I P +T S P + + V N I N
Sbjct: 817 MAEEMVEAAGEEEKELAAEMAA-AFINENLPEATFGSPKAGPGMWASVIRVLN--PIQGN 873
Query: 1014 TFEILHAHQLFPGEYALSLISSKF---GEDPNTYFVLGTA---VVHPEENEPKQGRIIIF 1067
T +++ Q E A S+ KF GED T+ V+GTA ++P
Sbjct: 874 TLDLIQLEQ---NEAAFSIAICKFANRGED--TFVVVGTAKDMTMNPRTCSGGFLHTYQL 928
Query: 1068 HYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNII 1126
+ KL+ I + ++ ++ F G++L I +R+++ +K LR E H N I
Sbjct: 929 VNNGEKLELIHKTPVEDVPGAISSFQGRILVGIGRLLRIYDLGKKKLLRKCENKHVPNFI 988
Query: 1127 ALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILD 1177
+ + G I V D+ S ++YK E S D N W+T LD
Sbjct: 989 -MSIHTMGHRIFVSDVQESFHFIRYKRQENQLIIFSDDTNYRWITCSTQLD 1038
>gi|345563727|gb|EGX46712.1| hypothetical protein AOL_s00097g460 [Arthrobotrys oligospora ATCC
24927]
Length = 1308
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 133/547 (24%), Positives = 233/547 (42%), Gaps = 56/547 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G LF + L+ +E SV +++ + I L L +G +FV S G+
Sbjct: 420 FLLQSEDGDLFKVGLDFDEN-----SVVRLRIKYFDTVPIATSLCILKSGFLFVASENGN 474
Query: 142 SQLVKLNRSPDE------------NGTYVS--------VMESFTNLAPIIDMVVVDLERQ 181
+ + D+ N Y S +MES ++ ++D + +L
Sbjct: 475 HHFYQFEKLGDDDNETEFTSDDEINAAYFSPRLAENLALMESVDSMNSLLDCQIANLTND 534
Query: 182 GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK-GIWALSIGSPKNLDNTLVLSF 240
Q+ T G S R +++G+ + E +LPG +W + S D +VLSF
Sbjct: 535 DAPQIYTICGANARSSFRTLKHGLEVSEIVSSELPGGPVAVWTTKLASQDEYDAYIVLSF 594
Query: 241 VGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSS 300
T VL++ G VEE GF S T + +LQV P I + RV+
Sbjct: 595 TNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDGLLQVHPKGIRHIRADR--RVNE 651
Query: 301 WEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYEVACLDISPL 357
W P +SI S N QV A +G VY+ L+ G + + + V CL + +
Sbjct: 652 WPAPQHRSIVAASTNSRQVAIALSSGEIVYFELDSDGQLAEYEDKKEMSGTVTCLSLGDV 711
Query: 358 SNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGGEII--PRSI 407
+ ++ AVG D + R+LSL S++ + P I+ P S
Sbjct: 712 PEGKM-----RSSFLAVGC-DDSTVRILSLDPDSTLESKSVQALTSAPTALRIMSMPDSA 765
Query: 408 LMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFA 467
+L + L G LD +G LTD + LG QP L + + TT + A
Sbjct: 766 GGDSQRSTLFLHIGLYSGVYLRTVLDTITGELTDTRTRFLGPQPVKLFSVSAAGTTAILA 825
Query: 468 CSDRPTVIYSSNH-KLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QK 525
S +P + Y++ + + + ++ + + + C+ ++E P+ + + T+++I +
Sbjct: 826 LSSKPWLGYTNGSGQYLLTPLSYQSLTYGCTFSSEQCPEGMVGIQGNNLRIFTVEKISEN 885
Query: 526 LHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTP-VRPSASTQAQNTTSSTIS 584
L ++PL PR++A ++ F V+++ +AD +P R + +AQN S+ +
Sbjct: 886 LQQESIPLSYTPRKMAKHPTAPYFYVVSS-----DADTLSPESRNNLIAKAQNGDSTELP 940
Query: 585 SLSYIKP 591
+ P
Sbjct: 941 PSEFGYP 947
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRI 1064
++D E+ H L E ALS+ F +D + V+GTA V++P + G
Sbjct: 959 VVDPINKEVTHKIDLGENEAALSIAVVPFSSQDDEHFLVVGTAKDLVLNPRSS--SCGYA 1016
Query: 1065 IIFHYDDG--KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHF 1122
++ DG +Q I + +++ A + F+G+LLA I +R+++ ++ LR +
Sbjct: 1017 HVYRLSDGGKTIQFIHKTKLEYAPLAFAAFHGRLLAGIGQDLRIYDLGMKQLLRKTQATV 1076
Query: 1123 NNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFL 1182
+ L + + I+V D+ S+T + YK E + D P W T +LD E
Sbjct: 1077 APNLITGLTTQNNRIIVSDIQESVTYVVYKQQENKLIPFADDMVPRWTTCTALLDYESVA 1136
Query: 1183 GAENSYNLFICQKDSAATSDED 1204
G + NL++ + A+ + D
Sbjct: 1137 GGDKFGNLWVVRAPPKASEEAD 1158
>gi|302680006|ref|XP_003029685.1| hypothetical protein SCHCODRAFT_58785 [Schizophyllum commune H4-8]
gi|300103375|gb|EFI94782.1| hypothetical protein SCHCODRAFT_58785 [Schizophyllum commune H4-8]
Length = 1213
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 134/519 (25%), Positives = 220/519 (42%), Gaps = 64/519 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G LF + +E E++ VKE K++ + + L L +G +FV S G+
Sbjct: 307 FLLQSEDGDLFKVTIEHEDE-----DVKEVKIKYFDTVPVASALCILKSGFLFVASEFGN 361
Query: 142 SQLVKLNRSPDEN-------GTY------------------------VSVMESFTNLAPI 170
L + + D++ +Y +++ + +L PI
Sbjct: 362 HYLYQFQKLGDDDDEPEFSSSSYPQFGMADSSMPLPHVHFKPHPLDNLALADEVESLDPI 421
Query: 171 IDMVVVDL-ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGS 228
ID V++L Q+ G SLR +R+G+ +EE DLPGI +W
Sbjct: 422 IDSKVLNLMPNSDTPQIFAACGRGPRSSLRTLRHGLEVEESVSSDLPGIPNAVWTTKKKE 481
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
D+ ++LSFV T VL++ G +EE + GF S T + +LQV P
Sbjct: 482 DDAFDSYIILSFVNGTLVLSI-GETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPQG-- 538
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRAL 345
+ S RV+ W P GKSI + NK QV+ A VY+ L++ G + +A+
Sbjct: 539 IRHVLSDRRVNEWRVPQGKSIVQATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAM 598
Query: 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEI 402
V L I E + AVG D + R++SL +L+ + + L
Sbjct: 599 GSTVLALSIG-----EVPEGRQRTPFLAVGC-EDQTVRIISLDPESTLDTISLQALTAP- 651
Query: 403 IPRSILMTCF------EGHCYLLVALG--DGSMFYFSLDPASGRLTDKKKVTLGTQPTVL 454
P SI + + H + V +G +G + LDP +G+LTD + LGT+P L
Sbjct: 652 -PSSICIAEMLDAAINKTHPTMFVNIGLQNGVLLRTVLDPMTGQLTDTRTRFLGTRPVKL 710
Query: 455 KTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST 514
+ A S R + Y+ + + F+ + ++ S +AE P+ L T S
Sbjct: 711 VRVAIQRNPAIMALSSRSWLNYTHQNMVHFTPLIFENLDFAWSFSAELSPEGLIGITGSV 770
Query: 515 FTFGTIDEIQ-KLHIRTVPLGEAPRRIAYQESSQTFGVI 552
I ++ KL ++PL PR+ ++ F +I
Sbjct: 771 LRIFQIPKLGVKLKQDSLPLSYTPRKFITHPNNHYFYMI 809
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 10/184 (5%)
Query: 1029 ALSLISSKFGEDPNTYFVLGTAV---VHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGA 1085
A+ S++ GE + V+GTA V P R F D L+ + E
Sbjct: 887 AVVPFSARNGE---LFLVVGTAANTRVSPRTCSSGYLRTYQFTNDGAGLELHHKTETDDV 943
Query: 1086 CYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMR 1144
++ F G+L A + +R+++ +K LR E F I + L +G I+ GD+
Sbjct: 944 PLALLAFQGRLAAGVGKALRIYDIGKKKLLRKAENKGFGTTI-VTLNTQGSRIIAGDMQE 1002
Query: 1145 SLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATS--D 1202
SL YK E + D P W+++ ++D + N+F+ + D + D
Sbjct: 1003 SLFYAVYKAPENRLLVFADDSQPRWISAATMVDYYTVAAGDRFGNVFVNRLDYKVSEQVD 1062
Query: 1203 EDRT 1206
+D T
Sbjct: 1063 DDPT 1066
Score = 41.2 bits (95), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 3 SLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
SLR +R+G+ +EE DLPGI +W D+ ++LSFV T VL++
Sbjct: 449 SLRTLRHGLEVEESVSSDLPGIPNAVWTTKKKEDDAFDSYIILSFVNGTLVLSI 502
>gi|145348011|ref|XP_001418451.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578680|gb|ABO96744.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1196
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 131/519 (25%), Positives = 227/519 (43%), Gaps = 63/519 (12%)
Query: 107 SVKEPKVELLGEISIPEC--LTYLDNGVVFVGSRLGDSQLVKLNRSPDENG---TYVSVM 161
+V E KV+ +IP C L L G +F S G+ L + D++ + S+M
Sbjct: 318 TVSEVKVKYFD--TIPPCVSLCVLKTGFLFAASEFGNHALYQFAGIGDDDAVESSSASLM 375
Query: 162 ES-------------FTNL---------APIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
E+ TNL P++DM +L + QL T G SLR
Sbjct: 376 ETEEGYEPVFFDPRPLTNLYTIDTIDSLCPVLDMQAHNLTEEEMPQLYTLCGTGARSSLR 435
Query: 200 IIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
I+R GI + E A LPG I+ + S + D+ +++SF+ T VL++ G V E
Sbjct: 436 ILRQGIAMNELAMSPLPGQPNAIFTVKKSSSEEYDSYIIVSFLNATLVLSI-GDTVSEVN 494
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
G T + ++LQ+ P L ++ R++ W P K IS +CN Q
Sbjct: 495 DSGILGTTTTLQACLMSDESLLQIHPGG--LRHIKADKRINEWRTPGRKQISKCTCNSKQ 552
Query: 319 VLCA-TGCDVYYLEVHGS----EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAA 373
V+ A TG +V Y E+ + E+++L ++ACLDI P+ + + A
Sbjct: 553 VVIALTGGEVIYFELDSAGQLIEVEKLETSG---DIACLDIGPVPEGAL-----RNRFLA 604
Query: 374 VGLWTDISARLLSL---PSLEEVCKEPLGGEIIPRSILM------TCFEGHCYLLVALGD 424
+G + D + R++SL L+ + + L G P S+L+ +G L V + +
Sbjct: 605 MGSY-DGTVRVMSLNPDDCLQTLAVQALKGSA-PSSLLVLQTAGTESTQGGLLLNVGMAN 662
Query: 425 GSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVF 484
G + ++D SG+L+D + LG + L + A S RP + YS V
Sbjct: 663 GVLIRATIDQVSGQLSDMRMRFLGARAPKLVRTSVRGAPALVALSSRPWLGYSEKGTFVL 722
Query: 485 SNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQ 543
+ ++ + +CS N+E P+ + ++ T +I+ + + + TV L PR ++
Sbjct: 723 APISYVPLEEVCSFNSEQCPEGVVAISNQTLRIASIERLGENFNQTTVKLRYTPRAMSAN 782
Query: 544 ESSQTFGVI-----TTRIDIQEADGSTPVRPSASTQAQN 577
++ +I T + +E +TP + T ++
Sbjct: 783 PDTKMVALIESDQCTVPVGEREGPEATPADEAPETNDED 821
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFV-LGTAV---VHPEENEPKQGRI 1064
I+D + +L E ALSL F PN + +GTAV P + G I
Sbjct: 849 IVDPKEAKSTFVLELHKSEAALSLCHV-FLTGPNELLLAVGTAVNLTFAPRNCD--GGFI 905
Query: 1065 IIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSH 1121
++ Y +DG+ L + G ++C + G LLA +N+++R++++ +K LR +E +
Sbjct: 906 HLYRYGNDGRTLNLVHSTPTDGPVGALCGYKGHLLAGVNNSLRIYDYGKKKLLRKVENRN 965
Query: 1122 FNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF 1181
F N I L GD I VGD+ S+ ++YK EGS + D P ++T+ LD +
Sbjct: 966 FPNFITT-LHAAGDRIYVGDVQESIHYVKYKADEGSIYIFADDTKPRYITATLPLDYDTL 1024
Query: 1182 LGAENSYNLFICQ--KDSAATSDEDRT 1206
GA+ N+F+ + KD + D+D T
Sbjct: 1025 AGADKFGNIFVNRLPKDVSEDMDDDPT 1051
>gi|322797581|gb|EFZ19622.1| hypothetical protein SINV_00421 [Solenopsis invicta]
Length = 1217
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 212/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E K++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
D+ + S M + +L+PI+ V DL + Q
Sbjct: 363 HLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +LR++R+G+ + E A +LPG +W + + D +++SFV T
Sbjct: 423 LYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADK--RVNEWKAP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ G + + + EV C+ + ++ E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--------- 412
++ AVGL D + R++SL + C P + +P + C
Sbjct: 600 Q-----RSWFLAVGL-QDNTVRIISLDPSD--CLAPRSMQALPAAAESLCIVEMGAKEAD 651
Query: 413 --------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
+ YL + L +G + LDP SG L D + LG++P L R
Sbjct: 652 NSEDAAPQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + Y ++ + ++ + ++E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIR-TVPLGEAPRRIAYQESSQTFGVITT 554
+ + + PL PR+ A S VI T
Sbjct: 772 AVFNQVSFPLEYTPRKFAIHADSAHLVVIET 802
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 1088 SMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSL 1146
++C + G++L + +RL++ +K LR E H N + + + G I V D+ S+
Sbjct: 951 AICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAV-VSINAIGQRIYVSDVQESV 1009
Query: 1147 TLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDED 1204
++YK E + D +P W+T+ +LD + A+ N+ + + + D D
Sbjct: 1010 YAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLATGINDDVD 1067
>gi|332026090|gb|EGI66238.1| Splicing factor 3B subunit 3 [Acromyrmex echinatior]
Length = 1217
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 212/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E K++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
D+ + S M + +L+PI+ V DL + Q
Sbjct: 363 HLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +LR++R+G+ + E A +LPG +W + + D +++SFV T
Sbjct: 423 LYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADK--RVNEWKAP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ G + + + EV C+ + ++ E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--------- 412
++ AVGL D + R++SL + C P + +P + C
Sbjct: 600 Q-----RSWFLAVGL-QDNTVRIISLDPSD--CLAPRSMQALPAAAESLCIVEMGAKDAD 651
Query: 413 --------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
+ YL + L +G + LDP SG L D + LG++P L R
Sbjct: 652 NSEDAAPQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + Y ++ + ++ + ++E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIR-TVPLGEAPRRIAYQESSQTFGVITT 554
+ + + PL PR+ A S VI T
Sbjct: 772 AVFNQVSFPLEYTPRKFAIHTDSAHLVVIET 802
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 6/203 (2%)
Query: 1007 LLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIII 1066
L ++ T E H+ AL L KF + F++ + N +
Sbjct: 866 LRLMAPTTGETFEVHRFEQNLAALCLCLVKFANQGDQLFLIVGVAKEFQLNPRVSNGGFL 925
Query: 1067 FHY----DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSH 1121
+ Y D ++ + + + ++C + G++L + +RL++ +K LR E H
Sbjct: 926 YTYKVNPDCTSIELLHKSPLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKH 985
Query: 1122 FNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF 1181
N + + + G I V D+ S+ ++YK E + D +P W+T+ +LD +
Sbjct: 986 IPNAV-VSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTV 1044
Query: 1182 LGAENSYNLFICQKDSAATSDED 1204
A+ N+ + + + D D
Sbjct: 1045 ATADKFGNIAVIRLATGINDDVD 1067
>gi|328770812|gb|EGF80853.1| hypothetical protein BATDEDRAFT_29900 [Batrachochytrium
dendrobatidis JAM81]
Length = 1213
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 221/511 (43%), Gaps = 58/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTF-SVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKL 147
G +F + +E G V+ K++ I + L+ L +G +F S G+ L ++
Sbjct: 311 GDVFKITVECTADSSGNAGQVQAIKIKYFDTIPVAVNLSLLKSGFLFAASEFGNHYLYQI 370
Query: 148 NRSPDENGT---YVSV-----------------------------MESFTNLAPIIDMVV 175
D++ + Y SV ++ +L P+ID V
Sbjct: 371 ENLGDDDESQVEYSSVDFPQGDSLPDSDSMPVVAFIPRELRNLAPVDEMESLCPLIDAKV 430
Query: 176 VDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDN 234
++L + Q+ G + RI+R+G+ + E A +LPG IW + D+
Sbjct: 431 LNLTDENSPQIYALCGRGSRSTFRILRHGLDVSEMAVSELPGNPNAIWTVRRSVSDIYDS 490
Query: 235 TLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTES 294
+++SF+ T VL++ G VEE G + T G + ++QV P I +
Sbjct: 491 YIIISFINATLVLSI-GETVEEVTDTGVLATTSTITVGQLGENALVQVYPQGIRYIRADK 549
Query: 295 KARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRALEYEVAC 351
RVS W+ P +SI +CN+ QV+ A + VY+ L+V G + + + V C
Sbjct: 550 --RVSEWKAPTNQSIVSAACNQRQVVVALSNNEIVYFELDVSGHLNEFQDRKEMSSRVLC 607
Query: 352 LDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSIL 408
L +SP+ +A+ A+G D++ R+LSL E C PL + + P S+
Sbjct: 608 LSLSPIPTGRL-----RARFLAIGC-ADLTVRILSLDP--ESCLHPLSMQALSAPPDSLA 659
Query: 409 M------TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLST 462
M T + +L + L +G + +D SG ++D + LG++ L +
Sbjct: 660 MIDMPDPTTGVSNLFLNIGLANGVLLKTCVDSGSGNMSDTRMRFLGSRGVKLFLLKIQGE 719
Query: 463 TNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDE 522
T + A S RP + ++ + + ++ + + S +E + + T +T ++
Sbjct: 720 TGLLALSSRPWISFTYHSRSKLMPLSYESLEYGSSFCSEQCTEGIVAITGNTLRILNTEK 779
Query: 523 IQKLHIR-TVPLGEAPRRIAYQESSQTFGVI 552
+ + + ++PL PRR + + SQ F VI
Sbjct: 780 LGSVFKQASIPLKYTPRRFIFDQVSQNFVVI 810
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 1016 EILHAHQLFPGEYALSLISSKFGED-PNTYFVLGTAV-VHPEENEPKQGRIIIFHY--DD 1071
E LH L E A + F T+ V+GTA V+ + +G + ++ D
Sbjct: 871 ETLHLEDLDDNEAAFCISFCIFQSSLTTTHIVVGTASNVNLSSSSFTEGYLRVYKLAPDG 930
Query: 1072 GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFL 1130
L+ + + IKG MC F G+LL + S +R+++ +K LR EC F I + L
Sbjct: 931 TSLEFLHKTPIKGIPKVMCSFQGRLLVGVGSLLRIYDLGKKKMLRKCECKGFPTTI-VTL 989
Query: 1131 KVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNL 1190
+G+ I++GD S+ Y+ + + D P W+T+ ++D + +G + N+
Sbjct: 990 HTQGNRIILGDAQESVHYAMYRAFDNRIVIFADDTIPRWVTATCMVDYDTVVGGDKMGNI 1049
Query: 1191 FICQKDSAATS---DEDRTHLQEV 1211
F+ + SA S DED T Q +
Sbjct: 1050 FV-NRLSAEVSKGIDEDTTGNQAI 1072
>gi|47212603|emb|CAF93045.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1171
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/509 (23%), Positives = 216/509 (42%), Gaps = 61/509 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E+M V E +++ I + + L G +FV S G+ L ++
Sbjct: 308 GDIFKVTLETDEEM-----VTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM-----ESF----------------TNLAPIIDMVVVDLERQGQGQ 185
D+ + S M ++F +L+PI+ + DL + Q
Sbjct: 363 HLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQESLSPIMSCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +LR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-------- 413
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-ADNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGVEKQ 651
Query: 414 ---------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGEKASIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVI 552
+ + PL PR+ + +I
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPETNNLVLI 800
>gi|307166104|gb|EFN60356.1| Splicing factor 3B subunit 3 [Camponotus floridanus]
Length = 1201
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 212/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E K++ + + + L G +FV S G+ L ++
Sbjct: 292 GDIFKITLETDEDM-----VTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQIA 346
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
D+ + S M + +L+PI+ V DL + Q
Sbjct: 347 HLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDTPQ 406
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +LR++R+G+ + E A +LPG +W + + D +++SFV T
Sbjct: 407 LYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVSFVNAT 466
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 467 LVLSI-GETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADK--RVNEWKAP 523
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ G + + + EV C+ + ++ E
Sbjct: 524 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGE 583
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--------- 412
++ AVGL D + R++SL + C P + +P + C
Sbjct: 584 Q-----RSWFLAVGL-QDNTVRIISLDPSD--CLAPRSMQALPAAAESLCIVEMGAKEAD 635
Query: 413 --------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
+ YL + L +G + LDP SG L D + LG++P L R
Sbjct: 636 NSEDSAPQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQA 695
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + Y ++ + ++ + ++E P+ + + +T ++++
Sbjct: 696 VLAMSSRSWLSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLG 755
Query: 525 KLHIR-TVPLGEAPRRIAYQESSQTFGVITT 554
+ + + PL PR+ A S +I T
Sbjct: 756 AVFNQVSFPLEYTPRKFAIHTDSAHLVIIET 786
Score = 46.6 bits (109), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 1088 SMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSL 1146
++C + G++L + +RL++ +K LR E H N + + + G I V D+ S+
Sbjct: 935 AICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAV-VSINAIGQRIYVSDVQESV 993
Query: 1147 TLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDED 1204
++YK E + D +P ++T+ +LD + A+ N+ + + + D D
Sbjct: 994 YAVRYKRQENQLIVFADDTHPRFITTTCVLDYDTVATADKYGNIAVIRLATGINDDVD 1051
>gi|389740093|gb|EIM81285.1| hypothetical protein STEHIDRAFT_86633 [Stereum hirsutum FP-91666
SS1]
Length = 1213
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 220/520 (42%), Gaps = 66/520 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G L+ + +E +E+ VK K++ + + L L +G +FV S G+
Sbjct: 307 FLLQSEEGDLYKVTIEHQEE-----EVKAVKIKYFDTVPVASSLCILKSGFLFVASEFGN 361
Query: 142 SQLVKLNRSPDENG-------------------------------TYVSVMESFTNLAPI 170
QL + + D++ +++ + +LAP+
Sbjct: 362 HQLYQFQKLGDDDNEPEFSSTDYPSFGMADPSAALPRAHFRPHPLDNLALADELESLAPV 421
Query: 171 IDMVVVDL-ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGS 228
ID V++L Q+ T G + R +R+G+ +EE DLPGI +W
Sbjct: 422 IDSKVMNLLPNSDTPQIFTACGRGARSTFRTLRHGLEVEETVSSDLPGIPNAVWTTKTRE 481
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
D+ ++LSFV T VL++ G +EE + GF S T + +LQV P
Sbjct: 482 DAPYDSYIILSFVNGTLVLSI-GETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPHG-- 538
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRAL 345
+ + RV+ W P GK+I + NK QV+ A VY+ L++ G + +A+
Sbjct: 539 IRHVLADRRVNEWRVPQGKTIVSATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAM 598
Query: 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEI 402
V L I E + AVG D + R++SL +LE + + L
Sbjct: 599 GSTVLALSIG-----EVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLETISLQALTA-- 650
Query: 403 IPRSIL---------MTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTV 453
P S L + + ++ + L +G + LDP +G+LTD + LGT+P
Sbjct: 651 -PPSALCIADMLDAGINKSQPTMFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPVR 709
Query: 454 LKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDS 513
L + + A S R + Y+ + + F+ + ++ S +AE P+ L T S
Sbjct: 710 LIRVQIQHQPAILALSSRTWLNYTHQNLMHFTPLIFDNLDFAWSFSAELCPEGLIGITGS 769
Query: 514 TFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
+ ++ KL ++PL PR+ A S+ F +I
Sbjct: 770 VLRIFQMPKLGTKLKQDSIPLSYTPRKFASHPSNSYFYII 809
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 80/187 (42%), Gaps = 8/187 (4%)
Query: 1027 EYALSLISSKFGEDPNTY-FVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082
E A SL F N Y V+GTA + P R F D L+ + + E
Sbjct: 881 EAAFSLAIVPFSVRNNEYHLVVGTAQDTFLAPRSCTSGFLRTYKFVDDGAGLELLHKTET 940
Query: 1083 KGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGD 1141
S+ F G+L+A I +R+++ +K LR E F + I + L +G I+VGD
Sbjct: 941 DDIPMSLLAFQGRLVAGIGKALRIYDIGKKKLLRKAESKTFASAI-ISLNTQGSRIIVGD 999
Query: 1142 LMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATS 1201
+ S+ YK E + D W+T ++D + N+FI + DS +
Sbjct: 1000 MQESIAYAVYKAPENKLLVFADDTQARWVTCSTMVDYTTVAAGDRFGNIFINRLDSKVSD 1059
Query: 1202 --DEDRT 1206
D+D T
Sbjct: 1060 QVDDDPT 1066
>gi|307205956|gb|EFN84082.1| Splicing factor 3B subunit 3 [Harpegnathos saltator]
Length = 1217
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 212/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE ++ M V E K++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDDDM-----VTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
D+ + S M + +L+PI+ V DL + Q
Sbjct: 363 HLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +LR++R+G+ + E A +LPG +W + + D +++SFV T
Sbjct: 423 LYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADK--RVNEWKAP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ G + + + EV C+ + ++ E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--------- 412
++ AVGL D + R++SL + C P + +P + C
Sbjct: 600 Q-----RSWFLAVGL-QDNTVRIISLDPSD--CLAPRSMQALPAAAESLCIVEMGVKDAD 651
Query: 413 --------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
+ YL + L +G + LDP SG L D + LG++P L R
Sbjct: 652 NSEDSAPQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + Y ++ + ++ + ++E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIR-TVPLGEAPRRIAYQESSQTFGVITT 554
+ + + PL PR+ A S VI T
Sbjct: 772 AVFNQVSFPLEYTPRKFAIHADSAHLVVIET 802
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 1088 SMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSL 1146
++C + G++L + +RL++ +K LR E H N + + + G I V D+ S+
Sbjct: 951 AICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAV-VSINAIGQRIYVSDVQESV 1009
Query: 1147 TLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDED 1204
++YK E + D +P W+T+ +LD + A+ N+ + + + D D
Sbjct: 1010 YAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLATGINDDVD 1067
>gi|340367933|ref|XP_003382507.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Amphimedon
queenslandica]
Length = 1214
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 223/504 (44%), Gaps = 65/504 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F ++L+ E+ + V K++ + + L L +G++F S G+
Sbjct: 301 FLLQSEQGDIFKVMLDVEDDI-----VVRIKIKYFDTVPVCSSLCVLKSGLLFCSSEFGN 355
Query: 142 SQLVKLNR-------------------------SPDENGTYVSVMESFTNLAPIIDMVVV 176
L ++ P +N V MES L+PI+ +
Sbjct: 356 HYLYQIAHLGDDSEREFHSDYPLEEGETFFFGPRPLKNLILVDEMES---LSPIMSCQIA 412
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNT 235
DL + QL G SLR++R+G+ + E A +LPG +W + S ++ D+
Sbjct: 413 DLANEDTPQLYAACGRGPRSSLRVLRHGLEVTEMAVSELPGNPHAVWTVKKDSKEDFDSY 472
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+V+SF+ T +L++ G VEE GF T C + ++Q+ P I S
Sbjct: 473 IVVSFMNATLILSI-GETVEEVTDSGFLGTTPTLACSQLGDDALIQIYPEGIRHI--RSD 529
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACL 352
RV+ W P + I + N++QV+ A +G ++ Y E+ S ++ + R + EV C+
Sbjct: 530 KRVNEWRSPGKRLIRQCAVNEHQVVIALSGGEIVYFEMDQSGQLNEYTERKEMTAEVICI 589
Query: 353 DISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------------PSL-EEVCKEP 397
+ + + + + AVGL +D + R++SL P+L E +C
Sbjct: 590 SLGSVPPGQ-----QRCRFLAVGL-SDQTVRIISLDPHDTLQPLSMQALPALPESLCIVN 643
Query: 398 LGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF 457
+ G + + + T G +L + L +G + +LD +G L+D + LGT+P L
Sbjct: 644 MSGNVSDDTTVST---GGLFLNIGLQNGVLLRTALDNVTGDLSDTRTRYLGTRPVKLFRV 700
Query: 458 RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTF 517
R T V A S R + Y+ + + ++ + + S +E P+ + + +T
Sbjct: 701 RIQGTEGVIAVSSRTWLNYTYQSRFHLTPLSYDLLEYASSFTSEQCPEGMVAISSNTLRI 760
Query: 518 GTIDEIQKLHIR-TVPLGEAPRRI 540
++++ + + + PL PR++
Sbjct: 761 LALEKLGVVFNQVSTPLQYTPRKL 784
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 1007 LLIIDQNTFEILHAHQLFPGEYALSLISSKFGE--DPNTYFVLGTA---VVHPEENEPKQ 1061
L ++ N + L Q E A SL +F D + V+GTA ++ P
Sbjct: 862 LRVMHPNQGKTLDIVQFEQNEAAFSLAVCQFVSKGDLEWFVVVGTAKDMIITPRA--ISS 919
Query: 1062 GRIIIFHY--DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LE 1118
G +I+F D KL+ + ++ +M F G+LL + +R+++ +K LR E
Sbjct: 920 GSLIVFRLSPDGSKLEHVHTTQLDDVPIAMAPFQGRLLVGVGKLLRIYDIGKKKMLRKCE 979
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
H ++ + +KV G + VGD+ ++ L Y+ E + + P + T+ ILD
Sbjct: 980 NKHLPYLV-VDIKVMGRRVYVGDVQEAVHFLYYRPHENQLVIFADEVVPRFCTTSCILDY 1038
Query: 1179 ELFLGAENSYNLFICQKDSAATS--DED 1204
A+ N+ I + S T DED
Sbjct: 1039 NTVASADKFGNITILRLPSDVTDQVDED 1066
>gi|71016864|ref|XP_758932.1| hypothetical protein UM02785.1 [Ustilago maydis 521]
gi|46098463|gb|EAK83696.1| hypothetical protein UM02785.1 [Ustilago maydis 521]
Length = 1549
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 147/549 (26%), Positives = 224/549 (40%), Gaps = 124/549 (22%)
Query: 112 KVELLGEISIP---ECLTYLDNGVVFVGSRLGDSQLVKL--------------------N 148
+VE LG S P + L+YL G+V VGS GD+ L ++
Sbjct: 552 RVEALGTTSQPAGPQALSYLGQGLVCVGSATGDNCLYRIIGQNASQKMPASSSEQVLTPP 611
Query: 149 RSPDENGTYVS-------------------VMESFTNLAPIIDMVVVD-------LERQG 182
SP ++ + +S +E++ NL P++D VV D
Sbjct: 612 SSPTQSRSMLSHAASSSRDHSELSTGGSLVNLETWQNLGPVVDFVVDDGAGGDPTYASSA 671
Query: 183 QGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIG--SPKNLDNTLVLSF 240
Q ++VTCSG GS+R R+G + + A + +P + IW++ G L L++ F
Sbjct: 672 QARIVTCSGLGPTGSVREARSGASVRDIASLPIPNAEQIWSVDAGVDDASKLTIGLLVGF 731
Query: 241 VGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTV--------------LQVTPSA 286
T L + A+ + T+ +DQ NV T+ L+V +
Sbjct: 732 ATSTAYLHFN-ADGDLTD----ATDQLVAAGANVSLPTIAATTVLFHDRSPQLLRVDRTG 786
Query: 287 AILISTE--SKARVSSWEPPNGKSISVVSCNK--NQVLCATGCDVYYLEVHGSEIKQLAH 342
A L S + S + + W PPN ++ S N +L + + YL + +
Sbjct: 787 ASLFSVQDASISILDQWRPPNELEVTSASVNSVGQAILALSDKSLLYLTDEDGALIERNK 846
Query: 343 RALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEI 402
+ LE EV+C+DISPL + AQL A G W +LP L EV E
Sbjct: 847 KMLEDEVSCVDISPLIAGKA------AQLVACGFWGRDVFDFYNLPDL-EVVPRGFAAEF 899
Query: 403 --IPRSILMTCFEGH---------------------CYLLVALGDGSMFYFSLD------ 433
+PRSIL+ FE YLL+ LGDG++ F L
Sbjct: 900 SSVPRSILLHRFESSQPEKASDAEFEFWGFNPNPLDAYLLIGLGDGTLVSFRLGGIVADG 959
Query: 434 ----PASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACS-DRPTVIYSSNHKLVFSNVN 488
P S L D K +TLGTQ L ++ + V A S RPT++Y + + +S +
Sbjct: 960 NAYVPVS--LYDAKTITLGTQALKLDAIKTSTGARVVAISGSRPTLVYHDSKRFSYSALK 1017
Query: 489 L---RQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG-EAPRRIAYQE 544
R V +C+ + ++ + TDS +I + + IRT PLG P IA
Sbjct: 1018 YKDPRSVATVCAGPGRVF--AVVVLTDS-LELTSISALGQRDIRTFPLGLNQPLAIAQWA 1074
Query: 545 SSQTFGVIT 553
+ F V T
Sbjct: 1075 DRKVFAVCT 1083
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 41/232 (17%)
Query: 1009 IIDQNTFEILHAHQLFPGEYA-----LSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGR 1063
I+D TFE+L +L P E L L K V+GT V + +E +GR
Sbjct: 1104 ILDHTTFELLDEIRLEPDERPNCITLLDLPGHKM-------LVVGTGYVSKQSSETVRGR 1156
Query: 1064 IIIFHY---------DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK- 1113
++ F + G+L+Q+ E G Y + L A++NS ++ + TN K
Sbjct: 1157 LVAFDVSTGSSRTKEERGRLRQLFECSENGNVYQVQSTRYHLCAAVNSEIKTYSITNCKD 1216
Query: 1114 --------------ELRLECSHFNNIIALFLK-VKGDFILVGDLMRSLTLLQYKTMEGSF 1158
E+R E S + IA L ++ D ++VGD +RS+ +L G
Sbjct: 1217 MSDKRPSGGPRRPYEVRQEGSWACSFIACNLSAIEPDRLVVGDALRSMNVLNVDRYTGRL 1276
Query: 1159 EEISRDYNPNWMTSIEILDDE--LFLGAENSYNLFICQKDSAATSDEDRTHL 1208
EI+RD +P+W ++ E+LD E ++GA+ S+NL+ Q+ S+E RT +
Sbjct: 1277 TEIARDCDPSWTSATELLDSETQTYIGADISFNLYTTQR--MPMSEEVRTSI 1326
>gi|321478392|gb|EFX89349.1| hypothetical protein DAPPUDRAFT_303178 [Daphnia pulex]
Length = 1215
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/514 (22%), Positives = 222/514 (43%), Gaps = 69/514 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G +F + ++ +E++ V+E K++ + + + L G +FV S G+
Sbjct: 301 FLVQTEQGDIFKITMDMDEEV-----VRELKIKYFDTVPVSSSMCVLKTGFLFVASEFGN 355
Query: 142 SQLVKLNR--------------------------SPDENGTYVSVMESFTNLAPIIDMVV 175
L ++ P +N V MES L+P++ +
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSTIPLEEGDTFFFAPRPLKNLVLVDEMES---LSPVLACHI 412
Query: 176 VDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDN 234
DL + QL G SLR++R+G+ + E A +LPG +W + + D
Sbjct: 413 ADLANEDTPQLYALCGRSSRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRKRADDEFDA 472
Query: 235 TLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTES 294
+V+SFV T VL++ G VEE GF T C ++ +LQV P I +
Sbjct: 473 YIVVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLGCSSLGDNALLQVYPEGIRHIRADR 531
Query: 295 KARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVAC 351
R++ W+ P ++IS + N+ QV+ + G ++ Y E+ G + + + EV C
Sbjct: 532 --RINEWKSPGKRAISRCAVNQRQVVISLAGGELVYFEMDPTGQLNEYTERKEMTAEVVC 589
Query: 352 LDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTC 411
+ ++ + + E +++ AVGL D + R++SL + C PL + +P + C
Sbjct: 590 MALANVPSGEQ-----RSRFLAVGL-ADNTVRVISLDPND--CLTPLSMQALPATPESLC 641
Query: 412 F---------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKT 456
G +L + L +G + LDP +G L D + LG++P +K
Sbjct: 642 IVEMGGHDKDSETTGTSGQLFLNIGLQNGVLLRTVLDPVTGDLADTRTRYLGSRP--VKL 699
Query: 457 FRSLSTTN--VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST 514
FR ++ + V A S R + Y ++ + ++ + +E P+ + +T
Sbjct: 700 FRVMTQNHEAVLAISSRTWLSYYFQNRFHLAPLSYDSLEFASGFASEQCPEGVVAIASNT 759
Query: 515 FTFGTIDEIQKLHIR-TVPLGEAPRRIAYQESSQ 547
++++ + + + PL PR+ +S +
Sbjct: 760 LRILALEKLGAVFNQVSYPLEYTPRKFVVHDSGR 793
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTAVVHPEENEPKQ---GRI 1064
I+D + LH +L E ALS+ ++F +DP YFVL V + PKQ G I
Sbjct: 865 IMDPTSGNSLHTIRLPQNEAALSIGLARFMNQDPEDYFVL-VGVAKDLKLNPKQCDGGFI 923
Query: 1065 IIFHYDD--GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSH 1121
+ + L+ + + ++ Y++C + G++L + +RL++ +K LR E H
Sbjct: 924 YTYKLINEWSALEFVHKTPVEDTPYAICAYQGRVLIGVGRLLRLYDMGKKKLLRKCENKH 983
Query: 1122 FNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF 1181
+ + + ++ G + V D+ S+ ++YK ME + D +P ++T++ +LD +
Sbjct: 984 LPSCV-VNIQALGQRVYVADVQESIHFVRYKRMENQLIIFADDTHPRYVTTMCLLDYDTV 1042
Query: 1182 LGAENSYNLFICQKDSAATSDED 1204
A+ N+ + + S + D D
Sbjct: 1043 AVADKFGNISVLRLPSRTSDDVD 1065
>gi|47087273|ref|NP_998668.1| splicing factor 3B subunit 3 [Danio rerio]
gi|28502779|gb|AAH47171.1| Splicing factor 3b, subunit 3 [Danio rerio]
Length = 1217
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 218/511 (42%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E+M V E +++ I + + L G +FV S G+ L ++
Sbjct: 308 GDIFKVTLETDEEM-----VTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM-----ESF----------------TNLAPIIDMVVVDLERQGQGQ 185
DE + S M ++F +L+PI+ + DL + Q
Sbjct: 363 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQESLSPIMSCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +LR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYVACGRGPGSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADK--RVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 540 GKKTIIRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--------- 412
+++ AVGL D + R++SL + C +PL + +P C
Sbjct: 600 Q-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGVEKQ 651
Query: 413 -----EG---HCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
+G YL + L +G + LDP +G L+D + LG++P L R
Sbjct: 652 DELGEKGTICFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + YS + + ++ + + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ + +I T
Sbjct: 772 AVFNQVAFPLQYTPRKFVIHPETNNLILIET 802
Score = 49.3 bits (116), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ QL E A S+ +F + ++VL N G I+ Y
Sbjct: 872 IQGNTLDLV---QLEQNEAAFSVAICRFLNGGDDWYVLVGVARDMILNPRSVGGGYIYTY 928
Query: 1070 ----DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 929 RIVGGGDKLEFLHKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENKHVPN 988
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
++ + G ++V D+ SL ++Y+ E + D P W+T+ +LD + A
Sbjct: 989 LVTGIHTI-GQRVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASA 1047
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + +++ DED T
Sbjct: 1048 DKFGNICVVRLPPNTSDDVDEDPT 1071
>gi|328869269|gb|EGG17647.1| CPSF domain-containing protein [Dictyostelium fasciculatum]
Length = 1194
Score = 127 bits (318), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 231/518 (44%), Gaps = 76/518 (14%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G L+ + L+ +M V ++ C+T L NG +FV S GD
Sbjct: 296 FLVQSEYGDLYKITLDYSGEM-----VSGMQIAYFDTFPTANCITMLKNGFLFVASEFGD 350
Query: 142 SQL-----VKLNRSPDENGTYVSVMESF---------------TNLAPIIDMVVVDLERQ 181
L + L+ +P + + M F ++L+PI+D V DL ++
Sbjct: 351 HGLYLFKSLGLDDAPTASSAGNTEMVFFEPVFEPRNLVLTATISSLSPIVDFKVADLAQE 410
Query: 182 GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWAL--SIGSPKN------- 231
G Q+ SG + +LR++R+G+ I + LPG GIW + S+ + +N
Sbjct: 411 GTPQMYALSGVSERANLRVLRHGLPITQMVDSQLPGTPAGIWTIPQSLTTMRNPQYQGIG 470
Query: 232 -----LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC----GNVDPRTVLQV 282
D +V+SFVG T VL + G VEE + G S T N+D +++Q+
Sbjct: 471 TVESPADRYIVVSFVGSTLVLGV-GETVEEVQDSGILSTTTTILIRSMGANLD--SIVQI 527
Query: 283 TPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV-LCATGCDVYYLEVH-GSEIKQL 340
I+ E RVS W P K+IS+ + N+ QV +C G ++ Y E+ + ++
Sbjct: 528 FAQGIRHINAER--RVSEWRAPGRKTISIAAANQQQVIICIGGSEIIYFELDPAGNLTEV 585
Query: 341 AHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL------------- 387
+ + ++ C++ +P+ T S + A+ + D R+LSL
Sbjct: 586 FKKDMRKDINCIEFAPIPRGRTMS-----RFVAISDY-DGPVRILSLERDNMLNQVSMVD 639
Query: 388 ---PSLEEVCKEPLGGEI--IPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDK 442
+E++C L + + I+ T +G +L + L +G + LD +G ++D
Sbjct: 640 TDRQQVEQLCVAELMVHEPGVDQQIVNTQRQGTLFLHIGLKNGVLKRAVLDGLTGEISDM 699
Query: 443 KKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAES 502
+ LG +P + + V A S R + YS+ + + +++ ++H SL+++
Sbjct: 700 RTRILGRRPIKFFRVKIKGSPAVLALSTRVWMCYSNLGRYEITPLSVEPLDHAASLSSDQ 759
Query: 503 YPDSLALATDSTFTFGTIDEIQKLHIRT-VPLGEAPRR 539
P+ + +++ +I+++ L + +PL P+R
Sbjct: 760 CPEGIVATSENNLKIFSIEKLGDLFNQVQIPLSCTPKR 797
Score = 47.8 bits (112), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHF---NNIIALF 1129
KL + E +++ F GKL+A + + +RL+E +K LR +C + N I ++
Sbjct: 910 KLALVHTTETDLIPHAVGSFQGKLIAGVGNVLRLYELGKKKLLR-KCENRKVPNQITSI- 967
Query: 1130 LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYN 1189
+ +GD I+V D+ S+ Y+ E + D P ++TS +LD + A+
Sbjct: 968 -QSQGDRIVVSDVQESVHFFTYRRSENVLVLFADDTAPRFVTSCVMLDFDTVAIADKFGT 1026
Query: 1190 LFICQKDSAATSDEDRTHLQEVGTV 1214
+ + + ++ +D D + ++GT+
Sbjct: 1027 IAVVRMPPSSDTDIDIENELDIGTL 1051
>gi|449546293|gb|EMD37262.1| hypothetical protein CERSUDRAFT_83017 [Ceriporiopsis subvermispora
B]
Length = 1213
Score = 126 bits (317), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 132/512 (25%), Positives = 219/512 (42%), Gaps = 74/512 (14%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G L+ + ++ EE+ VK K++ + + L L +G +FV S G+
Sbjct: 307 FLLQSEEGDLYKVTIDHEEQ-----DVKALKIKYFDTVPVASSLCILKSGFLFVASEFGN 361
Query: 142 SQLVKLNRSPDE----------------------------------NGTYVSVMESFTNL 167
L + + D+ N T V MES L
Sbjct: 362 HYLYQFQKLGDDDFEPEFSSASYPSFGMADPSIPLPPVYFRPRALDNLTLVDEMES---L 418
Query: 168 APIIDMVVVDL-ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALS 225
+P++D V++L Q+ T G S R++R+G+ +EE DLPGI +W
Sbjct: 419 SPVVDSKVMNLLPNSDTPQIFTACGRGPRSSFRMLRHGLDVEEVVSSDLPGIPNAVWTTK 478
Query: 226 IGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPS 285
+ D+ ++LSFV T VL + G +EE + GF S T + +LQV P
Sbjct: 479 LKEDDPYDSYIILSFVNGTLVLCI-GETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPH 537
Query: 286 AAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAH 342
+ + RV+ W P GK+I + NK QV+ A VY+ L++ G +
Sbjct: 538 G--IRHVLADKRVNEWRVPQGKTIVCATTNKRQVVVALSSAELVYFELDLDGQLNEYQDR 595
Query: 343 RALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP--------SLEEVC 394
+A+ V L I+ E + AVG D + R++SL SL+ +
Sbjct: 596 KAMGSTVLALSIA-----EVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLDTISLQALT 649
Query: 395 KEPLG---GEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQP 451
P +++ I T + ++ + L +G + LDP +G+LTD + LGT+P
Sbjct: 650 APPSAICIADMLDAGINKT--QQTTFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRP 707
Query: 452 TVLKTFRSLSTTN--VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLAL 509
+K R L N + A S RP + Y+ + + F+ + +++ S +AE P+ L
Sbjct: 708 --IKLIRVLVQRNPGILALSSRPWLNYTHQNLMHFTPLIFENLDYAWSFSAELCPEGLIG 765
Query: 510 ATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRI 540
+ S I ++ KL +PL PR+
Sbjct: 766 ISGSVLRIFHIPKLGTKLKQDAIPLLYTPRKF 797
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRII 1065
+D T ++H L E A SL F + V+GTA + P R
Sbjct: 867 VDAKTVNVIH---LDNNEMAFSLAVVPFAARGGELHLVVGTAQDTFLTPRSCTSGFLRTY 923
Query: 1066 IFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
F D L+ + + E ++ F GKL+A + ++R+++ +K LR +E F+
Sbjct: 924 RFSDDGQNLELLHKTETNDVPLAVMAFQGKLVAGVGKSLRIYDMGKKKLLRKVENKTFSA 983
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I + L +G I VGD+ S+ YK E + D P W+T++ ++D A
Sbjct: 984 AI-VALHTQGSHIYVGDMQESVFYAVYKAPENRLLVFADDTQPRWITAMTMIDYNTVAAA 1042
Query: 1185 ENSYNLFICQKDSAATS--DEDRT 1206
+ N+F+ + D + D+D T
Sbjct: 1043 DRFGNVFVNRLDPKVSEQVDDDPT 1066
Score = 40.4 bits (93), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 3 SLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
S R++R+G+ +EE DLPGI +W + D+ ++LSFV T VL +
Sbjct: 449 SFRMLRHGLDVEEVVSSDLPGIPNAVWTTKLKEDDPYDSYIILSFVNGTLVLCI 502
>gi|242018509|ref|XP_002429717.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
gi|212514723|gb|EEB16979.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
Length = 1218
Score = 126 bits (316), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 114/498 (22%), Positives = 212/498 (42%), Gaps = 62/498 (12%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E K++ + + + + G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIKLKYFDTVPVATSMCVMKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
D+ + S M + +L+PI+ V DL + Q
Sbjct: 363 HLGDDDDEPEFSSAMPLEEGDTFFFAPRALRNLVQVDEMDSLSPIMACQVADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +LR++R+G+ + E A +LPG +W + + D +++SFV T
Sbjct: 423 LYMLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVEEEYDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSALGDDALVQVYPDGIRHIRADK--RVNEWKAP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
K+I + N+ QV+ A T ++ Y E+ G + +A+ +V+C+ + + E
Sbjct: 540 GKKTIMKCAVNQRQVVIALTAGELVYFEMDPTGQLNEYTERKAMPSDVSCMALGNVVPGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--------- 412
+++ AVGL D + R++SL + C PL + +P + C
Sbjct: 600 L-----RSRFLAVGL-ADNTVRIISLDPSD--CLSPLSMQALPAAAESLCIVEMGAADKK 651
Query: 413 ---------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTT 463
+ + YL V L +G + LDP +G L D + LG++P L + +
Sbjct: 652 PDSEESTVTQSNLYLNVGLQNGVLLRTVLDPVTGDLADTRTRYLGSRPVKLFRIKMQGSE 711
Query: 464 NVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI 523
V A S R + Y ++ + ++ + + ++E P+ + + +T ++++
Sbjct: 712 AVLAMSSRSWLSYYYQNRFHLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRILALEKL 771
Query: 524 QKLHIR-TVPLGEAPRRI 540
+ + + PL PR+
Sbjct: 772 GAVFNQISFPLEYTPRKF 789
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 12/186 (6%)
Query: 1027 EYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ---GRIIIFHYDDG--KLQQIAEKE 1081
E ALS+ KF P + F++ VV + P+Q G + F ++ L+ + +
Sbjct: 887 EAALSIALVKFNNHPESLFLV-VGVVKEYQLSPRQVSFGYLYTFRINEDVTDLELVHKTT 945
Query: 1082 IKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHF---NNIIALFLKVKGDFIL 1138
+ A ++C ++G+LL + +RL++ +K LR +C + N I+++ G +
Sbjct: 946 VDEAPAAVCPYHGRLLVGVGRMLRLYDLGKKKLLR-KCENKYIPNQIVSIC--ATGQRVF 1002
Query: 1139 VGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSA 1198
V D+ S+ +++YK E + D +P W+T ILD + A+ N+ I + S
Sbjct: 1003 VSDVQESVYMVRYKRQENQLIIFADDTHPRWITCTTILDYDTVATADKFGNIAIIRLSSI 1062
Query: 1199 ATSDED 1204
T D D
Sbjct: 1063 ITDDVD 1068
>gi|193786710|dbj|BAG52033.1| unnamed protein product [Homo sapiens]
Length = 897
Score = 126 bits (316), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 204/492 (41%), Gaps = 56/492 (11%)
Query: 108 VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNR--SPDENGTYVSVM---- 161
V E +++ + + + L G +FV S G+ L ++ DE + S M
Sbjct: 2 VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDEEPEFSSAMPLEE 61
Query: 162 -----------------ESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNG 204
+ +L+PI+ + DL + QL G SLR++R+G
Sbjct: 62 GDTFFFQPRPLKNLVLVDELDSLSPILFCQMADLANEDTPQLYVACGRGPRSSLRVLRHG 121
Query: 205 IGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFT 263
+ + E A +LPG +W + D +++SFV T VL++ G VEE GF
Sbjct: 122 LEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSI-GETVEEVTDSGFL 180
Query: 264 SDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA- 322
T C + ++QV P I + RV+ W+ P K+I + N+ QV+ A
Sbjct: 181 GTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTPGKKTIVKCAVNQRQVVIAL 238
Query: 323 TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380
TG ++ Y E+ S ++ + R + +V C+ ++ + E +++ AVGL D
Sbjct: 239 TGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ-----RSRFLAVGL-VDN 292
Query: 381 SARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-----------------GHCYLLVALG 423
+ R++SL + C +PL + +P C G YL + L
Sbjct: 293 TVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLYLNIGLQ 350
Query: 424 DGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLV 483
+G + LDP +G L+D + LG++P L R V A S R + YS +
Sbjct: 351 NGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFH 410
Query: 484 FSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTV-PLGEAPRRIAY 542
+ ++ + +E P+ + + +T ++++ + + PL PR+
Sbjct: 411 LTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVI 470
Query: 543 QESSQTFGVITT 554
S +I T
Sbjct: 471 HPESNNLIIIET 482
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F ++VL N ++ Y
Sbjct: 552 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 608
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 609 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 668
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 669 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 727
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 728 DKFGNICVVRLPPNTNDEVDEDPT 751
>gi|409045147|gb|EKM54628.1| hypothetical protein PHACADRAFT_210427 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1213
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 222/519 (42%), Gaps = 64/519 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G L+ + +E EE+ VK K++ + + L L +G +FV + G+
Sbjct: 307 FLLQSEEGDLYKVTIEHEEQ-----DVKALKIKYFDTVPVASSLCILKSGFLFVAAEFGN 361
Query: 142 SQLVKLNRSPDENG-----------------------TYVS--------VMESFTNLAPI 170
L + + D++ Y S +++ +L P+
Sbjct: 362 HHLYQFQKLGDDDNEPEFSSTMYPNFGMANPAISLPPAYFSPRGLDNLTLVDELESLDPV 421
Query: 171 IDMVVVDL-ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGS 228
+D V++L Q+ G SLR++R+G+ +EE DLPGI +W +
Sbjct: 422 VDAKVLNLLPNSDSPQIFAACGRGGRSSLRMLRHGLEVEEVVSSDLPGIPNAVWTTKLRE 481
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
D+ ++LSFV T VL++ G +EE + GF S T + +LQV P
Sbjct: 482 DDPFDSYIILSFVNGTLVLSI-GETIEEVQDTGFLSSSPTLAVQQLGADALLQVHPHGIR 540
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRAL 345
+ + RV+ W P GK+I + N+ QV+ A VY+ L++ G + +A+
Sbjct: 541 HVLVDR--RVNEWRVPQGKTIVCATTNRRQVVVALSSAELVYFELDLEGQLNEYQERKAM 598
Query: 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEI 402
V L + E + AVG D + R++SL +LE + + L
Sbjct: 599 GSTVLALSVG-----EVPEGRQRTPFLAVGC-EDQTVRIVSLDPESTLETISLQALTAP- 651
Query: 403 IPRSILMTCF--------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVL 454
P +I + + ++ + L +G + LDP +G+LTD + LGT+P L
Sbjct: 652 -PSAICIADMLDAGINKVQPTTFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKL 710
Query: 455 KTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST 514
+ + A S R + Y+ + + F+ + +++ S +AE P+ L + S
Sbjct: 711 VRVQIQRNPGILALSSRSWLNYTHQNLMHFTPLIFDNLDYAWSFSAELCPEGLIGISGSV 770
Query: 515 FTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
I ++ KL ++PL PR++ ++ F +I
Sbjct: 771 LRIFQIPKLGTKLKQDSIPLSYTPRKMIVHPTNGFFYMI 809
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
Query: 1070 DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIA 1127
DDG+ ++ + + E ++ F G+L A I +R+++ +K LR +E +F+N I
Sbjct: 927 DDGRDIELLHKTETNDVPLAIMAFQGRLAAGIGKALRIYDIGKKKLLRKVESKNFSNAI- 985
Query: 1128 LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENS 1187
+ L +G I+VGD+ S+ YK E + D P W+T++ ++D +
Sbjct: 986 VTLNTQGSRIIVGDMQESIFYAVYKPPENRLLIFADDAQPRWITAVTMIDYNTVAAGDRF 1045
Query: 1188 YNLFICQKDSAATS--DEDRT 1206
N+F+ + D + D+D T
Sbjct: 1046 GNVFVNRLDPKISDQVDDDPT 1066
Score = 42.4 bits (98), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 3 SLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
SLR++R+G+ +EE DLPGI +W + D+ ++LSFV T VL++
Sbjct: 449 SLRMLRHGLEVEEVVSSDLPGIPNAVWTTKLREDDPFDSYIILSFVNGTLVLSI 502
>gi|340721347|ref|XP_003399083.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus terrestris]
gi|350406701|ref|XP_003487854.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus impatiens]
Length = 1217
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 215/509 (42%), Gaps = 57/509 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E K++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
D+ + S M + +L+PI+ V DL + +
Sbjct: 363 HLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDTPE 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +LR++R+G+ + E A +LPG +W + + D +++SFV T
Sbjct: 423 LYITCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADK--RVNEWKAP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ G + + + EV C+ + ++ E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSL-PS--------------LEEVCKEPLGGEIIPRS 406
++ AVGL D + R++SL PS E +C +G + S
Sbjct: 600 Q-----RSWFLAVGL-QDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKDANNS 653
Query: 407 ILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVF 466
++ + YL + L +G + LDP SG L D + LG++P L + V
Sbjct: 654 EDLSPQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKMQGNQAVL 713
Query: 467 ACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKL 526
A S R + Y ++ + ++ + ++E P+ + + +T ++++ +
Sbjct: 714 AMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAV 773
Query: 527 HIR-TVPLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ A S +I T
Sbjct: 774 FNQISFPLEYTPRKFAIHTDSAHLIIIET 802
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 1088 SMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSL 1146
++C + G++L + +RL++ +K LR E H N + + + G I V D+ S+
Sbjct: 951 AICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAV-VSINAIGQRIYVSDVQESV 1009
Query: 1147 TLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDED 1204
++YK E + D +P W+T+ +LD + A+ N+ + + S D D
Sbjct: 1010 YAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLASGINDDVD 1067
>gi|383847297|ref|XP_003699291.1| PREDICTED: splicing factor 3B subunit 3-like [Megachile rotundata]
Length = 1217
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 212/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E K++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
D+ + S M + +L+PI+ V DL + Q
Sbjct: 363 HLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +LR++R+G+ + E A +LPG +W + + D +++SFV T
Sbjct: 423 LYITCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADK--RVNEWKAP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ G + + + EV C+ + ++ E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAIGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--------- 412
++ AVGL D + R++SL + C P + +P + C
Sbjct: 600 Q-----RSWFLAVGL-QDNTVRIISLDPSD--CLAPRSMQALPAAAESLCIVEMGAKDAN 651
Query: 413 --------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
+ YL + L +G + LDP SG L D + LG++P L +
Sbjct: 652 NSEELSSQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKMQGNQA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + Y ++ + ++ + ++E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIR-TVPLGEAPRRIAYQESSQTFGVITT 554
+ + + PL PR+ A S +I T
Sbjct: 772 AVFNQISFPLEYTPRKFAIHSDSAHLIIIET 802
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 1088 SMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSL 1146
++C + G++L + +RL++ +K LR E H N I + + G I V D+ S+
Sbjct: 951 AICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAI-VSINAIGQRIYVSDVQESV 1009
Query: 1147 TLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDED 1204
++YK E + D +P W+T+ +LD + A+ N+ + + S D D
Sbjct: 1010 YAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLASGINDDVD 1067
>gi|427798971|gb|JAA64937.1| Putative damage-specific dna binding complex subunit ddb1, partial
[Rhipicephalus pulchellus]
Length = 1259
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 214/506 (42%), Gaps = 56/506 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E K++ I + + L G +FV + G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIKLKYFDTIPVAASMCVLKTGFLFVAAEFGNHCLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
R DE + S + E +L+P + + DL + Q
Sbjct: 363 RLGEEDEEPEFSSAIPLEEGDTFFFAPRALRNLLPVEELDSLSPAMGCTIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +R++R+G+ + E A +LPG +W + + ++ D +++SFV T
Sbjct: 423 LYVACGRGPRSCIRVLRHGLEVSEMAVSELPGNPNAVWTVKRKADEDYDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCAQIGDDALVQVYPEGIRHIRADK--RVNEWRTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ G + R + ++ C+ ++ + E
Sbjct: 540 GKKAIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTDRREMSADIICMSLASVPTGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSI------------LM 409
+++ AVGL D + R++SL + C PL + +P + +
Sbjct: 600 Q-----RSRFLAVGL-ADNTVRIISLDPSD--CLSPLSMQALPATPESLSIVEMGMTEVE 651
Query: 410 TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACS 469
T +G YL + L +G + LD +G L+D + LG++P L R + A S
Sbjct: 652 TTGQGILYLNIGLQNGVLLRTVLDQVTGDLSDTRTRYLGSRPVKLFKVRMQGSDAALAMS 711
Query: 470 DRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIR 529
R + Y ++ + ++ + ++E P+ + + +T ++++ + +
Sbjct: 712 SRSWLSYYYQNRFHLTPLSYETLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQ 771
Query: 530 -TVPLGEAPRRIAYQESSQTFGVITT 554
+ L PR+ S ++ T
Sbjct: 772 VSTTLEYTPRKFVVNSDSGHLIIVET 797
Score = 66.6 bits (161), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 96/193 (49%), Gaps = 8/193 (4%)
Query: 1027 EYALSLISSKFGEDPN-TYFVLGTAV-VHPEENEPKQGRIIIF----HYDDGKLQQIAEK 1080
E ALS+ KF P+ Y V+G A + + + G +++ H + +L+ +
Sbjct: 881 EAALSVALVKFASQPDEQYVVVGAARELSLQPWHARSGGLLLTYRLSHAGETRLELVHAT 940
Query: 1081 EIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVG 1140
++ A ++C F G+LLA + +RL++ +K LR + + + ++ G+ ++VG
Sbjct: 941 SVEEAPTALCPFQGRLLAGVGKCLRLYDLGRKKLLRKCENKYIPSAIVSIQSMGNRVVVG 1000
Query: 1141 DLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAAT 1200
D+ S L+YK E + D P W+T+ +LD + GA+ N+ I + ++ +
Sbjct: 1001 DVQESFFFLRYKRQENQLVIFADDAVPRWITASCMLDYDTVAGADKFGNVSIIRLPNSVS 1060
Query: 1201 S--DEDRTHLQEV 1211
DED T ++ +
Sbjct: 1061 DEVDEDPTGIKSL 1073
>gi|169848339|ref|XP_001830877.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
gi|116508046|gb|EAU90941.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
Length = 1213
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 131/530 (24%), Positives = 226/530 (42%), Gaps = 66/530 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL + G LF + +E EE+ VK K++ + + L L +G +FV S G+
Sbjct: 307 FLLQNEDGDLFKVTIEHEEE-----DVKALKIKYFDTVPVASSLCILKSGFLFVASEFGN 361
Query: 142 SQLVKLNRSPDENG-------TY------------------------VSVMESFTNLAPI 170
L + + D++ +Y +++ + +L PI
Sbjct: 362 HHLYQFQKLGDDDDEPEVTSTSYPSFGMADPTAALPRAYFKPRPLDNLALADELESLDPI 421
Query: 171 IDMVVVDLERQGQG-QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGS 228
+D V++L Q+ G +LR +R+G+ +EE +LPGI +W
Sbjct: 422 LDSKVLNLLPNSDAPQIFAACGRGARSTLRTLRHGLEVEESVSSELPGIPNAVWTTKKTE 481
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
D+ ++LSFV T VL++ G +EE + GF S T + +LQV P
Sbjct: 482 EDPYDSYIILSFVNGTLVLSI-GETIEEVQDTGFLSSSPTIAVQQIGADALLQVHPHGIR 540
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRAL 345
+ + RV+ W P GK+I + NK QV+ A VY+ L++ G + +A+
Sbjct: 541 HVLADR--RVNEWRVPQGKTIVTATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAM 598
Query: 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEI 402
V L I E + AVG D + R++SL +LE + + L
Sbjct: 599 GSTVLALSIG-----EVPEGRQRTPYLAVGC-EDQTVRIISLDPETTLETLSLQALTAP- 651
Query: 403 IPRSILMTCF--------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVL 454
P SI + + ++ + L +G + LDP +G+LTD + LGT+P L
Sbjct: 652 -PSSICIADMLDASINKSQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKL 710
Query: 455 KTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST 514
+ A S R + Y+ + + F+ + +++ S +AE P+ L +
Sbjct: 711 IRVPVHKNPAILALSSRSWINYTHQNMMHFTPLIYDNLDYAWSFSAELSPEGLIGIAGNV 770
Query: 515 FTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITT--RIDIQEA 561
TI ++ KL T+PL PR++ + F +I + R+ +EA
Sbjct: 771 LRIFTIPKLGSKLKQDTLPLSYTPRKLITHPENNYFYLIESDHRVYSEEA 820
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 1006 NLLIIDQNTFEILHAHQLFPGEYALSL----ISSKFGEDPNTYFVLGTA---VVHPEENE 1058
N+ IID + + L E A S+ S++ GE + V+GTA V P E
Sbjct: 860 NIRIIDPVENKTVAVFPLDNNEAAFSIAIVPFSARNGE---LHLVVGTAKDTTVSPRTCE 916
Query: 1059 PKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-L 1117
R F + L+ + + E ++ F G+L A + +R+++ +K LR +
Sbjct: 917 SGFLRTYKFTENGTGLELLHKTETDDVPMALLAFQGRLAAGVGKALRIYDIGKKKLLRKV 976
Query: 1118 ECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILD 1177
E F I + L +G ILVGD+ S+ + YK E + D P W+T+I ++D
Sbjct: 977 ENKSFTTAI-VTLTTQGSRILVGDMQESVQYVVYKQPENRLLTFADDTQPRWVTAITMVD 1035
Query: 1178 DELFLGAENSYNLFICQKDSAATS--DEDRT 1206
+ + N+F+ + DS + DED T
Sbjct: 1036 YNTIVAGDRFGNIFVNRLDSKVSDQVDEDPT 1066
>gi|66553024|ref|XP_623333.1| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Apis mellifera]
gi|380015815|ref|XP_003691890.1| PREDICTED: splicing factor 3B subunit 3-like [Apis florea]
Length = 1217
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 214/509 (42%), Gaps = 57/509 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E K++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
D+ + S M + +L+PI+ V DL + Q
Sbjct: 363 HLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +LR++R+G+ + E A +LPG +W + + D +++SFV T
Sbjct: 423 LYITCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADK--RVNEWKAP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ G + + + EV C+ + ++ E
Sbjct: 540 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAIGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSL-PS--------------LEEVCKEPLGGEIIPRS 406
++ AVGL D + R++SL PS E +C +G + S
Sbjct: 600 Q-----RSWFLAVGL-QDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKDANNS 653
Query: 407 ILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVF 466
++ + YL + L +G + LDP SG L D + LG++ L + V
Sbjct: 654 EELSLQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRAVKLFRIKMQGNQAVL 713
Query: 467 ACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKL 526
A S R + Y ++ + ++ + ++E P+ + + +T ++++ +
Sbjct: 714 AMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAV 773
Query: 527 HIR-TVPLGEAPRRIAYQESSQTFGVITT 554
+ + PL PR+ A S +I T
Sbjct: 774 FNQISFPLEYTPRKFAIHSDSAHLIIIET 802
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 6/201 (2%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFH 1068
II +T + H+L AL L KF + F++ + N ++
Sbjct: 868 IIAPSTGQTFEVHRLEQNLAALCLSLVKFANQGDQLFLIVGIAKEFQLNPRVSSGGFLYT 927
Query: 1069 Y----DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
Y + L+ + + + ++C + G++L + +RL++ +K LR E H
Sbjct: 928 YKVNSECTNLELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIP 987
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
N + + + G I V D+ S+ ++YK E + D +P W+T+ +LD +
Sbjct: 988 NAV-VSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVAT 1046
Query: 1184 AENSYNLFICQKDSAATSDED 1204
A+ N+ + + S D D
Sbjct: 1047 ADKFGNIAVIRLASGINDDVD 1067
>gi|443694993|gb|ELT96001.1| hypothetical protein CAPTEDRAFT_155561 [Capitella teleta]
Length = 1215
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/512 (22%), Positives = 217/512 (42%), Gaps = 61/512 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +F+ S G+ L ++
Sbjct: 308 GDVFKITLETDEDM-----VTEVRLKYFDTVPVASSMCVLKTGFLFIASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
D+ + S M + +L+PI+ + DL + Q
Sbjct: 363 HLGDDDDEPEFSSAMPLEEGDTFFFAPRPLKNLVMVDEMDSLSPIMHCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +LR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LFAMCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRNIEDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++Q+ P I S RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSQLGDDALVQIYPDGIRHI--RSDKRVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
K+I + N+ QV+ A +G ++ Y E+ G + + L +V C+ + + + E
Sbjct: 540 GKKTIVRCAVNQRQVVIALSGGELVYFEMDPTGQLNEYTERKELSSDVVCMGLGRVPSGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--------- 412
+ + AVGL D + R++SL + C PL + +P S C
Sbjct: 600 Q-----RCRFLAVGL-NDNTVRIISLDPTD--CLSPLSMQALPASPESLCIVEMGGAVEG 651
Query: 413 --EGHC----YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVF 466
E H +L + L +G + LD +G L+D + LG++P L + +V
Sbjct: 652 QEEAHINHGLFLNIGLQNGVLLRAVLDNVTGDLSDTRTRYLGSRPVKLFRISMQGSDSVL 711
Query: 467 ACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKL 526
A S R + Y+ ++ + ++ + + +E P+ + + +T ++++ +
Sbjct: 712 AMSSRSWLSYTYQNRFHLTPLSYDTLEYASGFASEQCPEGIVAISTNTLRILALEKLGAI 771
Query: 527 HIR-TVPLGEAPRRIAYQESSQTFGVITTRID 557
+ ++PL PR+ ++T VI D
Sbjct: 772 FNQVSIPLQYTPRKFVIH--AETGNVIVIESD 801
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 8/184 (4%)
Query: 1027 EYALSLISSKFGEDPNTYFVL-GTA---VVHPEENEPKQGRIIIFHYDDG--KLQQIAEK 1080
E A S+ +F + FVL GT V+ P G I+ F + + L+ +
Sbjct: 884 EAAFSVSIVRFANHGDEAFVLVGTVKDLVLSPRSC--SCGYILCFRFTNNYEGLELLHRT 941
Query: 1081 EIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVG 1140
+ ++ F G++L + +R+++ +K LR + F + V G+ I+V
Sbjct: 942 PVDDVPAAIAAFQGRVLIGVGRHLRIYDLGKKKMLRKCENKFLPNFVTAIHVNGNRIMVS 1001
Query: 1141 DLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAAT 1200
D+ S ++YK E + D P W+T +LD GA+ N+ + + S AT
Sbjct: 1002 DIQDSFHFVRYKRHENQLIVFADDTCPRWLTCSCMLDYNTMAGADKFGNICVVRLPSNAT 1061
Query: 1201 SDED 1204
D D
Sbjct: 1062 DDVD 1065
>gi|213407660|ref|XP_002174601.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces japonicus
yFS275]
gi|212002648|gb|EEB08308.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces japonicus
yFS275]
Length = 1078
Score = 124 bits (311), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 207/470 (44%), Gaps = 45/470 (9%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+Y++ D +G ++M + F+V +E +GE I C+ L N +F+GS
Sbjct: 281 RKYIVSDESGAVYMF------NIGNNFNVT---LEKIGEAPIASCIVALPNDQIFLGSHF 331
Query: 140 GDSQLVKLNRSPDENGTYVSVME--SFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGS 197
GDS+L + P G+ V ++E SF NLAPI D + G +V C + EGS
Sbjct: 332 GDSKLYRFQNKPGVAGS-VELLEVQSFDNLAPISDFCID--HGNGGSFMVACCNAYNEGS 388
Query: 198 LRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEET 257
LR +++GI I ++ I++P + ++++ + S ++ L + + T V +S + E
Sbjct: 389 LREMKSGIDISDYGVIEMPNVCSLYSVQLQS--SVTKYLFVGSISETSVFEISQSG-EMD 445
Query: 258 EMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNK 316
+ ++ T + G D + V S+ L + ++S W +G +I+ +
Sbjct: 446 LVDSLCLEEPTIFVGATSDSSCLYHVARSSVCLFDGK---QLSYWFA-DGGAITCAAVYD 501
Query: 317 NQV-LCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVG 375
N V L T + +L +++ ++ ++ +V L S A+ VG
Sbjct: 502 NAVCLSMTNNQIVFLH----KLQVVSKLQVDSDVTAL-----------SFLNDARTICVG 546
Query: 376 LWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE----GHCYLLVALGDGSMFYFS 431
LW + +LL L S C E+ ++ + C + L ++ G + F
Sbjct: 547 LW---NQKLLLLDSDNTTCTVRETLEVNEKAQSLVCVKLAGIASVALYMSTESGKLITFD 603
Query: 432 LDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQ 491
+DP + + + L P + TF++ + + + P +Y N L F+ +
Sbjct: 604 IDPVTKGIKQRLTYPLTAVPLNMNTFQTPNGPVLITLGEHPYAVYGENQHLSFAYIGNSD 663
Query: 492 VNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIA 541
+ + L P + AT + ++ +QKLHIR +P+ PRRIA
Sbjct: 664 IVCLSHLQHPGIPANTVYATRNALKLSNVNMLQKLHIRRIPVAGIPRRIA 713
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 5/143 (3%)
Query: 1042 NTYFVLGTAVVHPEENEPKQGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASI 1100
N V+GT +P+ +EP GR+I+F D+ KL A + +GA +S+ GKLL +
Sbjct: 772 NERVVVGTGFNYPDRDEPDGGRLIVFRLDEQEKLVTEAVYKTQGAIFSVEYQEGKLLVGM 831
Query: 1101 NSTVRLFEWTNEKELRLECSHFNNIIALFLKVKG-DFILVGDLMRSLTLLQYKTMEGSFE 1159
N+ + F + N K LR+ S L + D ++VGD+M+SLTL Y T + + E
Sbjct: 832 NAVLCTFRYEN-KTLRVVGSTRTPTYCLNIAASSKDIVVVGDMMKSLTL--YNTEKDTAE 888
Query: 1160 EISRDYNPNWMTSIEILDDELFL 1182
E++RD+ W+TS++ L + LF
Sbjct: 889 EVARDFGALWVTSVQPLSETLFF 911
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 47/285 (16%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
N+VV K NRIEI+ + L + ++ K+ +K FR P KD L + ++ +
Sbjct: 27 NVVVLKTNRIEIYGFEGDKLVQLGSSTVFSKVRSIKSFRPPLSTKDHLIVTVSPFSYFTV 86
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLE--- 806
D A S N + +IDP RVI + GL IP+
Sbjct: 87 TWDPDKKQFINEVTAQPPASTFFLNKQRNPKL-LIDPSNRVICSHAFQGLLTFIPITQRI 145
Query: 807 -------------KDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGR-HVKT 852
+DNF ++R+ EL++ D+ FL+ + PT+ +++D H+K
Sbjct: 146 TKKRQKDVPSQSVQDNF-----TVRIMELDVLDIVFLYTSKTPTLAVLYKDSRSVIHLKA 200
Query: 853 HEISLKEKEFTKT-PWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGK-------- 903
+ ++L EKE + + +IE E L+ GG + G+ + Y S +
Sbjct: 201 YTVNLAEKELNEDESFACHDIE-EGRLIAHYD---GGVFVFGEVYVYYVSREKKSSKMLV 256
Query: 904 -----SYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFML 943
+Y AV Q ++ T VC N +Y++ D +G ++M
Sbjct: 257 SYPVTAYSAVF-QSFQNGTEVC-----INERKYIVSDESGAVYMF 295
>gi|357606250|gb|EHJ64976.1| putative Splicing factor 3B subunit [Danaus plexippus]
Length = 1216
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 213/503 (42%), Gaps = 53/503 (10%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + +E +E M V E K++ + + + L G +FV G+ L ++
Sbjct: 308 GDIFKITIETDEDM-----VTEIKLKYFDTVPVATAMCVLKTGFLFVACEFGNHYLYQIA 362
Query: 149 RSPDENGT--YVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE+ + S M + +L+PI+ V DL + Q
Sbjct: 363 HLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELDSLSPILACHVADLTGEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHT 244
+ G SLR +R+G+ + E A +LPG +W + + D+ +++SFV T
Sbjct: 423 VYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRHKDDDYDSYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCHALGSDALVQVYPDGIRHIRADK--RVNEWKAP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
KSI + N+ QV+ A TG ++ Y E+ G + + L +V+C+ + ++ E
Sbjct: 540 GKKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVSCMALGSVATGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTC-----FEGHC 416
+A AVGL D + R++SL + C P + +P S C FE
Sbjct: 600 Q-----RAWFLAVGL-VDNTVRIISLDPAD--CLAPRSMQALPASPESLCIVDQPFESGA 651
Query: 417 ----YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRP 472
+L + L +G + +LD SG L D + LG++P L R S V A S R
Sbjct: 652 KSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQSAEAVLAVSSRT 711
Query: 473 TVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTV- 531
+ Y ++ + ++ + + ++E + + + +T ++++ + +T
Sbjct: 712 WLGYQYQNRFHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFNQTFQ 771
Query: 532 PLGEAPRRIAYQESSQTFGVITT 554
L PR+ + V+ T
Sbjct: 772 QLDYTPRKFVINSDNNHIIVLET 794
Score = 63.2 bits (152), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIA 1127
Y+ GKL+ + + I ++ FNGKLLA + +RL++ K LR E H N+IA
Sbjct: 931 YNTGKLELVHKTPIDEYPGALAAFNGKLLAGVGRMLRLYDIGRRKLLRKCENRHIPNLIA 990
Query: 1128 LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENS 1187
++ I V D+ S+ ++YK E + D NP W+T+ ILD + A+
Sbjct: 991 DIKTIR-QRIFVSDVQESVFCVKYKKRENQLIIFADDTNPRWITNTCILDYDTVAMADKF 1049
Query: 1188 YNLFICQKDSAATSDED 1204
N+ + + + + D D
Sbjct: 1050 GNVAVLRLPQSVSDDVD 1066
>gi|390601867|gb|EIN11260.1| hypothetical protein PUNSTDRAFT_118747 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1214
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 129/525 (24%), Positives = 219/525 (41%), Gaps = 66/525 (12%)
Query: 83 LLGDLAGRLFMLLLEKEEKM-------DGTFSVKEPKVELLGEISIPECLTYLDNGVVFV 135
L+ + G F LL +E + +G V K++ + + L L +G +FV
Sbjct: 295 LMHKIKGDFFFLLQSEEGDLFKVTIDYNGDEDVNALKIKYFDTVPVATGLCILKSGFLFV 354
Query: 136 GSRLGDSQLVKLNRSPDEN-------GTY------------------------VSVMESF 164
S GD L + + D++ Y ++++++
Sbjct: 355 ASEFGDHHLYQFQKLGDDDDEPEFSSADYPQRGMAYPSQALPRAWFRPRPLDNLALLDTV 414
Query: 165 TNLAPIIDMVVVDL-ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIW 222
+L+PIID V++L Q+ G + R +R+G+ +EE DLPGI +W
Sbjct: 415 ESLSPIIDARVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEETVSSDLPGIPNAVW 474
Query: 223 ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQV 282
+ D+ ++LSFV T VL++ G +EE + GF S T + +LQV
Sbjct: 475 TTKLKEDDAHDSYIILSFVNGTLVLSI-GETIEEVQDTGFLSSAPTIAVQQIGADALLQV 533
Query: 283 TPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQ 339
P + + RV+ W P GK+I + NK QV+ A VY+ L++ G +
Sbjct: 534 HPQG--IRHVLADRRVNEWRVPAGKTIVTATTNKRQVVVALSSAELVYFELDLEGQLNEY 591
Query: 340 LAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKE 396
+A+ V L I E + AVG D + R++SL +LE + +
Sbjct: 592 QDRKAMGSTVLALSIG-----EVPEGRQRTPFLAVGC-EDQTVRIISLDPESTLETISLQ 645
Query: 397 PLGGEIIPRSILMTCF------EGHCYLLVALG--DGSMFYFSLDPASGRLTDKKKVTLG 448
L P +I + + H + V +G +G + LDP +G+LTD + LG
Sbjct: 646 ALTAP--PTAICIADMLDASINKVHPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLG 703
Query: 449 TQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLA 508
T+P L + A S R + Y+ ++ + F+ + ++ S +AE PD L
Sbjct: 704 TRPVRLIRVNVQRNPAILALSSRSWLNYTHHNLMHFTPLIFENLDFAWSFSAELCPDGLI 763
Query: 509 LATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
S I + KL +PL PR+ +++ F +I
Sbjct: 764 GIAGSVLRIFQIPRLGTKLKQDAMPLTYTPRKFIPHPANRYFYLI 808
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSH 1121
R F + L+ + + E ++ F G+L+A + ++R+++ +K LR +E
Sbjct: 920 RTYAFTNEGAGLELLHKTETDDVPMAVMAFQGRLVAGVGKSLRIYDIGKKKLLRKVENKS 979
Query: 1122 FNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF 1181
F I + L +G ILVGD+ S+ YK E + D P W++S ++D
Sbjct: 980 FATAI-VTLATQGSRILVGDMQESMAYAVYKPPENRLLVFADDVQPRWISSSTMVDYNTV 1038
Query: 1182 LGAENSYNLFICQKDSAATS--DEDRT 1206
+ + N+F+ + D+ + D+D T
Sbjct: 1039 IAGDRFGNVFVNRLDAKVSEQVDDDPT 1065
>gi|356576847|ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
Length = 1214
Score = 123 bits (308), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 127/548 (23%), Positives = 225/548 (41%), Gaps = 60/548 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE V E K++ I + + L +G +F S G+
Sbjct: 297 FLLQTEYGDIFKVTLEHNND-----RVSELKIKYFDTIPVTASMCVLKSGFLFAASEFGN 351
Query: 142 SQLVKLNRSPDEN---GTYVSVMES----------------------FTNLAPIIDMVVV 176
L + DE+ + ++ME+ +L PI+DM V
Sbjct: 352 HALYQFKSIGDEDDVEASSATLMETEQGFQPVFFQPRRLKNLVRIDQVESLMPIMDMKVS 411
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNT 235
+L + Q+ T G SLRI+R G+ + E A LPGI +W + + D
Sbjct: 412 NLFEEETPQIYTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPSAVWTVKKNAIDEFDAY 471
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+V+SF T VL++ G VEE GF + + +++QV P+ I +
Sbjct: 472 IVVSFTNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIRED-- 528
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH-GSEIKQLAHRALEYEVACLD 353
R++ W P ++IS V N+ QV+ A +G ++ Y EV ++ ++ + +VACLD
Sbjct: 529 GRINEWRTPGKRTISKVGSNRLQVVIALSGGELIYFEVDVTGQLMEVEKHEMSGDVACLD 588
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMT 410
I+P+ +++ AVG + D + R+LSL + C + L + + P S+L
Sbjct: 589 IAPVPEGRQ-----RSRFLAVGSY-DKTIRILSLDP--DDCMQALSVQSVSSAPESLLFL 640
Query: 411 CFEGHC------------YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR 458
+ +L L +G MF +D +G+L+D + LG + L
Sbjct: 641 EVQASVGGEDGADHPASLFLNAGLQNGVMFRTVVDMVTGQLSDSRSRFLGLRAPKLFPII 700
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFG 518
+ S RP + Y + + ++ + + S +++ + +
Sbjct: 701 VRGKRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCVEGVVAVAGEALRIF 760
Query: 519 TIDEIQKLHIRTV-PLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQN 577
TI+ + + TV PL PR+ Q + +I + A+ R AQ
Sbjct: 761 TIERLGETFNETVIPLRYTPRKFVLQPKRKLLVMIESDQGALTAEEREAARKECFESAQA 820
Query: 578 TTSSTISS 585
+ T S+
Sbjct: 821 GENGTESA 828
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 1062 GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LE 1118
G I I+ + +DG+ L+ + + +++G ++C+F G+LLA I +RL++ + LR E
Sbjct: 921 GFIHIYRFVEDGRSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKRRLLRKCE 980
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
F N I + + D I VGD+ S +Y+ E + D P W+T+ +D
Sbjct: 981 NKLFPNTI-VSIHAYRDRIYVGDVQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDF 1039
Query: 1179 ELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
+ GA+ N++ + +D + +ED T
Sbjct: 1040 DTMAGADKFGNIYFVRLPQDVSDEIEEDPT 1069
>gi|336371417|gb|EGN99756.1| hypothetical protein SERLA73DRAFT_88390 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384183|gb|EGO25331.1| hypothetical protein SERLADRAFT_355643 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1216
Score = 123 bits (308), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 126/519 (24%), Positives = 221/519 (42%), Gaps = 64/519 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G L+ + +E E+ VK K++ + + L L +G +FV S G+
Sbjct: 307 FLLQSEDGDLYKVTIEHEDD-----EVKALKIKYFDTVPVASSLCILKSGFLFVASEFGN 361
Query: 142 SQLVKLNRSPDENG-------TY------------------------VSVMESFTNLAPI 170
L + + D++ +Y +++ + +L PI
Sbjct: 362 HYLYQFQKLGDDDNEPEFSSTSYPSFGMAEPSMPLPHAHFHPRALDNLALADEMESLDPI 421
Query: 171 IDMVVVD-LERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGS 228
+D V++ L Q+ G SLR++R+G+ +EE +LPGI +W
Sbjct: 422 LDSKVMNILPNSDTPQIFAACGRGARSSLRMLRHGLDVEESVSSELPGIPNAVWTTKRKE 481
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
D+ ++LSFV T VL++ G +EE + GF S T + +LQV P
Sbjct: 482 DDPFDSYIILSFVNGTLVLSI-GETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPQG-- 538
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRAL 345
+ + RV+ W P GK+I + NK QV+ A VY+ L++ G + +A+
Sbjct: 539 IRHVLADRRVNEWRVPQGKTIVSAATNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAM 598
Query: 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP--------SLEEVCKEP 397
V L + E + AVG D + R++SL SL+ + P
Sbjct: 599 GSTVLALSVG-----EVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLETISLQALTAPP 652
Query: 398 LG---GEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVL 454
+++ SI T + ++ + L +G + LDP +G+LTD + LGT+P L
Sbjct: 653 SAICIADMLDASINKT--QPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIRL 710
Query: 455 KTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST 514
+ + A S R + Y+ + + F+ + +++ S +AE P+ L S
Sbjct: 711 VRVQIHGNPAILALSSRSWLNYTHQNLMHFTPLIFENLDYAWSFSAELSPEGLIGIAGSV 770
Query: 515 FTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
I ++ KL T+PL PR+ +++ F +I
Sbjct: 771 LRIFQIPKLGTKLKQDTIPLSYTPRKFISHPTNRYFYLI 809
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 11/208 (5%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT-YFVLGTAV---VHPEENEPKQGRI 1064
IID + L L E A SL F N + V+GTA + P R
Sbjct: 863 IIDPVEAKTLSMITLDSNECAFSLAIVPFSARGNELHLVVGTAADTFLAPRSCSSGFLRT 922
Query: 1065 IIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRL----ECS 1120
F D L+ + + E ++ F G+L+A + +R+++ +K LR +
Sbjct: 923 YKFTEDGTGLELLHKTETDDVPLALMAFQGRLVAGVGKALRIYDIGKKKLLRKVENKARA 982
Query: 1121 HFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDEL 1180
F+ I + L +G I+VGD+ S++ + YK E + D P W+T+ ++D
Sbjct: 983 TFSTAI-VTLNTQGSRIIVGDMQESISFVAYKAPENRLLVFADDNQPRWITATTMVDYTT 1041
Query: 1181 FLGAENSYNLFICQKDSAATS--DEDRT 1206
+ N+F+ + D + D+D T
Sbjct: 1042 IAAGDRFGNIFVNRLDPKVSEQVDDDPT 1069
Score = 40.4 bits (93), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 3 SLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
SLR++R+G+ +EE +LPGI +W D+ ++LSFV T VL++
Sbjct: 449 SLRMLRHGLDVEESVSSELPGIPNAVWTTKRKEDDPFDSYIILSFVNGTLVLSI 502
>gi|255081708|ref|XP_002508076.1| predicted protein [Micromonas sp. RCC299]
gi|226523352|gb|ACO69334.1| predicted protein [Micromonas sp. RCC299]
Length = 1199
Score = 123 bits (308), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 213/491 (43%), Gaps = 51/491 (10%)
Query: 100 EKMDGTFSVKEPKVELLGEISIPECLT--YLDNGVVFVGSRLGDSQLVKLNRSPDE---- 153
E GT V E K++ +IP C++ L G +F S G+ L + D+
Sbjct: 312 EYQKGTEFVSEVKIKYFD--TIPPCVSICVLKTGFLFAASEFGNHALYQFQGIGDDEDDV 369
Query: 154 ---NGTYVSVMESFT-------------------NLAPIIDMVVVDLERQGQGQLVTCSG 191
+ T V E + +L P++DM +L + QL G
Sbjct: 370 ESSSATLVETDEGYQPVFFEPRALRNLHPIDDVESLCPVLDMQCHNLVAEETPQLYALCG 429
Query: 192 GFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 250
+LR++R G+ + E A LPG ++ + + D +V+SF T VL++
Sbjct: 430 TGPRSTLRVLRQGVALSEMAVSPLPGNPNAVFTVRKSASDEFDAYIVVSFTNATLVLSI- 488
Query: 251 GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSIS 310
G VEE GF T + ++LQV P L + R++ W P K+++
Sbjct: 489 GETVEEVSDSGFLGTVPTLSASLLGDDSLLQVHPGG--LRHIRADKRINEWRTPGRKTVT 546
Query: 311 VVSCNKNQVLCA-TGCDVYYLEV-HGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAK 368
V+ N QV+ A +G ++ Y E+ ++ ++ +VACLDI P+ +
Sbjct: 547 RVTTNARQVIIALSGGELIYFELDQTGQLMEVEKLETSGDVACLDIGPVPEGHL-----R 601
Query: 369 AQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMTCFE--GHCYLLVALG 423
+ AVG + D + R+LSL + E C + +G + + P S+LM + G YL V L
Sbjct: 602 NRFLAVGSF-DSTVRILSLGA--EDCLQTMGVQALAAAPNSLLMLRDDGSGSIYLNVGLT 658
Query: 424 DGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTV-IYSSNHKL 482
+G + +D +G+L+D + LG +P L + A S RP + + ++
Sbjct: 659 NGVLLRADVDSVTGQLSDTRARFLGARPPKLSAVSVQGKAAMMALSSRPWLGHFDLANRF 718
Query: 483 VFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIA 541
S ++ + H ++++ P+ + +T ++ + ++ + RT L PR+++
Sbjct: 719 ALSPLSYEPLEHAAPFSSDACPEGVVAVAGNTLRIVAVERLGEQFNQRTCKLRYTPRQMS 778
Query: 542 YQESSQTFGVI 552
T V+
Sbjct: 779 VNVDRNTLAVV 789
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 101/205 (49%), Gaps = 10/205 (4%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAV---VHPEENEPKQGRII 1065
I+D + ++ E AL F + + +G+AV P ++E G I
Sbjct: 853 IVDPASASTKQIVEMTGNEAALCCCHVYFPQADELFLAVGSAVSLTFSPRDSE--GGFIH 910
Query: 1066 IFHY-DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
++ Y DG ++ + + G +MC F G+LL + +T+RL+++ +K LR +E +F
Sbjct: 911 LYRYTQDGGIELFHKTPLDGVPGAMCGFKGRLLVGVGNTLRLYDFGKKKLLRKVENRNFP 970
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
N I + +G+ I VGD+ S ++YK +GS ++ D P +T+ LD + G
Sbjct: 971 NFIKT-IHAQGERIYVGDVQESFHYVRYKREDGSMYIVADDVQPRHVTAACPLDYDTIAG 1029
Query: 1184 AENSYNLFICQ--KDSAATSDEDRT 1206
+ N+F+ + +D + +ED T
Sbjct: 1030 GDRFGNVFVSRLAQDVSDEIEEDPT 1054
>gi|392593521|gb|EIW82846.1| hypothetical protein CONPUDRAFT_81012 [Coniophora puteana
RWD-64-598 SS2]
Length = 1213
Score = 122 bits (307), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 217/517 (41%), Gaps = 60/517 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G LF + ++ +E VK K++ + + L L +G +FV S G+
Sbjct: 307 FLLQSEDGDLFKVTIDHDED-----EVKSLKIKYFDTVPVASSLCILKSGFLFVASEFGN 361
Query: 142 SQLVKLNRSPDENG---------TYVSVMESFT-------------NLA---------PI 170
L + + D++ + ESF NLA PI
Sbjct: 362 HYLYQFQKLGDDDDEPEFSSTSFPSFGMAESFIPLPHAHFRPRGLDNLALADEIESLDPI 421
Query: 171 IDMVVVD-LERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGS 228
+D V++ L Q+ T G + R++R+G+ +EE +LPGI +W
Sbjct: 422 LDAKVMNILPNSDTPQIFTACGRGSRSTFRMLRHGLEVEESVSSELPGIPNAVWTTKRTE 481
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
D+ ++LSFV T VL++ G +EE + GF S T + +LQV P
Sbjct: 482 DDPYDSYIILSFVNGTLVLSI-GETIEEVQDTGFLSSAPTLAVQQIGSDALLQVHPQG-- 538
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEY 347
+ S RV+ W P GK+I + NK QV+ A + ++ Y E+ ++ + ++
Sbjct: 539 IRHVLSDRRVNEWRVPQGKTIVCATTNKRQVVVALSSAELVYFEL---DLDGQLNEYQDW 595
Query: 348 EVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIP 404
+ + LS E + AVG D + R++SL +LE + + L P
Sbjct: 596 KAMGSTVLALSVGEVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLETISLQALTAP--P 652
Query: 405 RSILMTCF--------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKT 456
+I + + ++ + L +G + LDP +G+LTD + LGT+P L
Sbjct: 653 SAICIADMLDASINKSQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIRLVR 712
Query: 457 FRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFT 516
+ A S R + Y+ + F+ + +++ S +AE P+ L T S
Sbjct: 713 VTVQKNPGILALSSRSWLNYTHQSLMHFTPLIFENLDYAWSFSAELSPEGLIGITGSVLR 772
Query: 517 FGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
I ++ KL VPL PR+ ++Q +I
Sbjct: 773 IFQIPKLGMKLKQDAVPLSYTPRKFVSHPANQYLYLI 809
Score = 63.5 bits (153), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 8/207 (3%)
Query: 1007 LLIIDQNTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQG 1062
+ IID +H +L E A S+ F D + V+GTA ++ P
Sbjct: 861 ICIIDPIEARTIHTVELDNNESAFSVAVVPFAARDNELHLVVGTAADTLLTPRSCRSGYL 920
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSH 1121
R F + L+ + + E ++ F G+L+A + ++RL+E +K LR E
Sbjct: 921 RTYRFTDEGRSLELLHKTETDDVPLAVMAFQGRLIAGVGKSLRLYEIGKKKLLRKAENKS 980
Query: 1122 FNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF 1181
F + I + L +G I+VGD+ S+ YK E + D P W+T++ ++D
Sbjct: 981 FASAI-VTLNTQGSRIIVGDMQESVHFAAYKAPENRLLIFADDMQPRWVTALTMVDYTTI 1039
Query: 1182 LGAENSYNLFICQKDSAATS--DEDRT 1206
+ N+FI + D + D+D T
Sbjct: 1040 AVGDRFGNVFINRLDMRVSDQVDDDPT 1066
>gi|240275059|gb|EER38574.1| DNA damage-binding protein 1a [Ajellomyces capsulatus H143]
Length = 1134
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 114/193 (59%), Gaps = 24/193 (12%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R+LL D GRLF L+L +D +V+ K++LLG+I L Y+ G+ F+GS
Sbjct: 349 QRWLLADDYGRLFFLML----VLDTDNAVQSWKLDLLGDIPRASVLVYMGGGITFIGSHQ 404
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDL------ERQ------GQGQLV 187
GDS+L+++ G++ V+++F N+API+D ++DL E Q GQ ++V
Sbjct: 405 GDSELIRIT-----EGSF-EVIQTFANIAPILDFTIMDLGGRAIGESQTHEFSSGQARIV 458
Query: 188 TCSGGFKEGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRV 246
T SG F +GSLR +R+G+G+EE + + I +WAL + P+ +TL++SFV TRV
Sbjct: 459 TGSGAFNDGSLRSVRSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLLVSFVDETRV 518
Query: 247 LTLS-GAEVEETE 258
+ EVEE E
Sbjct: 519 FYFTPDGEVEEKE 531
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 114/210 (54%), Gaps = 7/210 (3%)
Query: 357 LSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG--GEIIPRSILMTCF-- 412
+S ++ PA+A + + ++ ++SLP L LG G+ +PRS+L+
Sbjct: 558 VSGVTVTTSPARACILCLPQTAEVV--VMSLPDLAIRRSTSLGEPGDAVPRSVLVAEVLP 615
Query: 413 EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT-QPTVLKTFRSLSTTNVFACSDR 471
L V++ DGS+F FS + LT K+TLG+ QP+ K R NVFA ++
Sbjct: 616 NNPATLFVSMADGSVFSFSFNSEDFSLTSMSKLTLGSEQPSFKKLPRGDGLYNVFATCEQ 675
Query: 472 PTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTV 531
P++IY+ ++V+S VN Q + +C N+E+YP S+ALAT S +D + I+T+
Sbjct: 676 PSLIYAVEGRIVYSAVNSDQASRICHFNSEAYPGSIALATPSELKITLVDAERTTQIQTL 735
Query: 532 PLGEAPRRIAYQESSQTFGVITTRIDIQEA 561
+GE RR+AY + FG+ T + +++
Sbjct: 736 EVGETVRRVAYSAPERAFGIGTIKRTLEDG 765
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 158/369 (42%), Gaps = 92/369 (24%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM-KFFRGPTD----------------- 732
LVVAK+NR+E ++ TP+GL +YGK+ ++ K R P
Sbjct: 29 LVVAKSNRLEFYSQTPDGLSLEYSKAIYGKVTMLAKLSRPPLPSKPPPQPQSLDHQLPLQ 88
Query: 733 ------KKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDP 786
+ D+LFI T R + + NL K + +++D + S+ G +IDP
Sbjct: 89 PAPFRPQTDILFIGTDRASYFTVSWDQKTKNLRTERK-YVDLADPSARASQLGDRCLIDP 147
Query: 787 EARVIGLRLYNGLFKIIPLEK-----------------------------------DNFE 811
R + L LY G+ +IP+ + + E
Sbjct: 148 SGRFLTLELYEGIVTVIPIGQPLRSRGSGRRLGKRAANASASAAYANQDAAAGAAAADLE 207
Query: 812 L-KASSIRMEELEIQDVQFLHGCQN--PTIICIHQDVNGR-HVKTHEISLKEKEFTKTPW 867
L + R+EEL ++ FLH + P + +++D G+ +K E+ +
Sbjct: 208 LGEPCQARVEELLVRSSTFLHTQADTLPRMALLYEDTMGKVRLKVRELEVMHGGMGMGGG 267
Query: 868 K----------------------QDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSY 905
++ +EM AS ++PVP PLGG +++G+ SI Y S
Sbjct: 268 TGSGGGIGADGGIVAVLKGLDLLKEELEMGASFLVPVPAPLGGLLVLGETSIRYLDDASN 327
Query: 906 VAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELL 965
++ + +++ V + +VD G+R+LL D GRLF L+L +D +V+ K++LL
Sbjct: 328 ECISQPLKEATIFVAWEQVD--GQRWLLADDYGRLFFLML----VLDTDNAVQSWKLDLL 381
Query: 966 GEHCKGPVV 974
G+ + V+
Sbjct: 382 GDIPRASVL 390
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 121/242 (50%), Gaps = 18/242 (7%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKF----GEDPNTYF----VLGTAVV 1052
EV ++ D+ F L + L E S+I ++F G + N F V+GT+ +
Sbjct: 767 EVIASRFMLADEIMFRELDIYDLNKDELVESVIRAQFPDGIGSEGNDLFKDLFVVGTSYL 826
Query: 1053 HPEENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTN 1111
+GRI+ F + +L ++AE +KGAC ++ K++A++ TV ++ +
Sbjct: 827 DDFGEGSIRGRILAFEVTANRQLAKVAEMPVKGACRALAIVQDKIVAALMKTVVVYTLSK 886
Query: 1112 ----EKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT----MEGSFEEISR 1163
+ L S+ + + + V G+ I V DLM+S+++++Y+ + S E++R
Sbjct: 887 GQFADYTLSKTASYRTSTAPVDIAVTGNLIAVADLMKSVSIVEYQQGANGLPDSLTEVAR 946
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLVQ 1223
+ W T++ + ++ +L ++ NL + ++ +D+DR L EV + L+G+ + +
Sbjct: 947 HFQTLWSTAVAPVAEDTWLESDAEGNLVMLHRNVNGVTDDDRRRL-EVTSEILLGEMVNR 1005
Query: 1224 CR 1225
R
Sbjct: 1006 IR 1007
Score = 48.5 bits (114), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 1 EGSLRIIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
+GSLR +R+G+G+EE + + I +WAL + P+ +TL++SFV TRV +
Sbjct: 466 DGSLRSVRSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLLVSFVDETRVFYFT 522
>gi|393217872|gb|EJD03361.1| hypothetical protein FOMMEDRAFT_108572 [Fomitiporia mediterranea
MF3/22]
Length = 1213
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 216/519 (41%), Gaps = 64/519 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G L+ + ++ E++ V+ K++ + + L L +G +FV S G+
Sbjct: 307 FLLQSEEGDLYKVTIDHEDE-----DVRALKIKYFDTVPVASSLCILKSGFLFVASEFGN 361
Query: 142 SQLVKLNRSPDEN-----------------------GTYVS--------VMESFTNLAPI 170
L + + D++ Y + + +L PI
Sbjct: 362 HHLYQFQKLGDDDNEPEFSSTDYPNFGMADPTVPLPAAYFKPRPLDNLVLADEIESLDPI 421
Query: 171 IDMVVVD-LERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGS 228
ID V++ L Q+ G S R +R+G+ +EE DLPGI +W I
Sbjct: 422 IDSKVMNILPNSDTPQIFAACGRGARSSFRTLRHGLEVEEVVSSDLPGIPNAVWTTRIKE 481
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
D+ ++LSFV T VL++ G +EE + GF S T + +LQV P
Sbjct: 482 DDPYDSYIILSFVNGTLVLSI-GETIEEVQDTGFLSSAPTLAVQQIGSDALLQVHPQG-- 538
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRAL 345
+ + RV+ W P G++I + NK QV+ A VY+ L++ G + +A+
Sbjct: 539 IRHVLADRRVNEWRVPQGRTIVAATTNKRQVVVALSSAELVYFELDLEGQLNEYQDRKAM 598
Query: 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEI 402
V L + E + AVG D + R++SL +LE + + L
Sbjct: 599 GSTVLALSVG-----EVPPGRQRTPYLAVGC-EDQTVRIVSLDPESTLETISLQALTAP- 651
Query: 403 IPRSILMTCF--------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVL 454
P +I + + ++ + L +G + LDP +G+LTD + LGT+P L
Sbjct: 652 -PSAICIADMLDSSIDKNQPTMFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPVKL 710
Query: 455 KTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST 514
+ +++ A S R + Y+ L F+ + ++H +AE P+ L + S
Sbjct: 711 MRVQVQRNSSILALSSRSWLNYTHQGLLHFTPLIFETLDHAWEFSAELCPEGLIGISGSV 770
Query: 515 FTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
I + KL ++PL PR+ +Q F +I
Sbjct: 771 LRIFQIPRLGTKLKQDSMPLTYTPRKFIPHPMNQYFYMI 809
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRII 1065
I++ T +++H L E A S+ F + + +GTA + P R
Sbjct: 867 INKATVKVVH---LDNNEAAFSIAIVPFAARNSELFLCVGTASSTFLAPRSCSSGFIRTY 923
Query: 1066 IFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
F L+ + + E ++ F G+L A + ++R++E +K LR +E + +
Sbjct: 924 AFTNGGADLELVHKTEADDVPMALMAFQGRLCAGVGKSLRIYEIGKKKLLRKVETKTYGS 983
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I + L +G I+VGD+ S+ +K E + D P W TS ++D
Sbjct: 984 AI-VTLNTQGSRIIVGDMQESIVYAVFKPPENRLLIFADDSQPRWTTSAVMVDYTTIAAG 1042
Query: 1185 ENSYNLFICQKDSAATS--DEDRT 1206
+ N+FI + DS + DED T
Sbjct: 1043 DKFGNVFINRLDSKISDQVDEDPT 1066
Score = 40.8 bits (94), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 3 SLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
S R +R+G+ +EE DLPGI +W I D+ ++LSFV T VL++
Sbjct: 449 SFRTLRHGLEVEEVVSSDLPGIPNAVWTTRIKEDDPYDSYIILSFVNGTLVLSI 502
>gi|395333071|gb|EJF65449.1| hypothetical protein DICSQDRAFT_178021 [Dichomitus squalens
LYAD-421 SS1]
Length = 1213
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 216/507 (42%), Gaps = 64/507 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G L+ + +E EE+ VK K++ + + L L +G +FV S G+
Sbjct: 307 FLLQSEEGDLYKVTIEHEEQ-----DVKALKIKYFDTVPVASGLCILKSGFLFVASEFGN 361
Query: 142 SQLVKLNRSPDEN-------GTY------------------------VSVMESFTNLAPI 170
+ + D++ G Y +++++ +L PI
Sbjct: 362 HYFYQFQKLGDDDNEPEFSSGDYPSYGMADPTAALPRAYFRPRALDNLTLVDELESLCPI 421
Query: 171 IDMVVVDL-ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGS 228
+D V++L Q+ G + R +R+G+ +EE DLPGI +W +
Sbjct: 422 LDSKVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEEVVSSDLPGIPNAVWTTKLKE 481
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
D+ ++LSFV T VL + G +EE + GF S T + +LQV P
Sbjct: 482 DDPYDSYIILSFVNGTLVLCI-GETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPHG-- 538
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRAL 345
+ S RV+ W P+GK+I + NK QV+ A VY+ L++ G + +A+
Sbjct: 539 IRHVLSDRRVNEWRVPSGKTIVCATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAM 598
Query: 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEI 402
V L I+ E + AVG D + R++SL +LE + + L
Sbjct: 599 GSTVLALSIA-----EVPEGRQRTPYLAVGC-EDQTVRIVSLDPESTLETISLQALTAP- 651
Query: 403 IPRSILMTCF--------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVL 454
P +I + + ++ + L +G + LDP +G+LTD + LGT+P L
Sbjct: 652 -PSAICIADMLDAGINKTQPTTFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPIRL 710
Query: 455 KTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST 514
+ A S RP + Y+ + + F+ + +++ S +AE + L + S
Sbjct: 711 LRVNIQRNPAILALSSRPWLNYTHQNFMHFTPLIFENLDYAWSFSAELCQEGLIGISGSL 770
Query: 515 FTFGTIDEI-QKLHIRTVPLGEAPRRI 540
I ++ KL ++PL PR++
Sbjct: 771 LRIFQIPKLGTKLKQDSIPLSYTPRKL 797
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT-YFVLGTA---VVHPEENEPKQGRII 1065
+D T ++H L E A SL F N + V+GTA + P R
Sbjct: 867 LDAQTVNVIH---LDNNEAAFSLAIVPFAAKNNELHLVVGTAQDTFLAPRSCTSGFLRTY 923
Query: 1066 IFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
F D L+ + + E ++ F GKL+A + +RL++ +K LR +E +
Sbjct: 924 RFTDDGRNLELLHKTETNDVPLAIMAFQGKLVAGVGKALRLYDIGKKKLLRKVENKTLGS 983
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I + L +G I++GD+ S+ YK E + D P W+T+ +LD + +
Sbjct: 984 TI-VTLNTQGSRIIIGDMQESVFYAVYKPPENRLLVFADDVQPRWVTATTMLDYNTVVAS 1042
Query: 1185 ENSYNLFICQKDSAATS--DEDRT 1206
+ N+F+ + D+ + D+D T
Sbjct: 1043 DRFGNVFVNRLDAKISDQIDDDPT 1066
>gi|402222132|gb|EJU02199.1| hypothetical protein DACRYDRAFT_21931 [Dacryopinax sp. DJM-731 SS1]
Length = 1209
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 126/515 (24%), Positives = 216/515 (41%), Gaps = 60/515 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G LF + ++ E++ VK K++ + + L L +G +FV S G+
Sbjct: 307 FLLQSEDGDLFKVTIDHEDE-----EVKTMKIKYFDTVPVASSLCILKSGFLFVASEFGN 361
Query: 142 SQLVKLNRSPDENGT--YVSV--------------------------MESFTNLAPIIDM 173
L + + D++ Y SV + + PI+D
Sbjct: 362 HYLYQFQKLGDDDDEIEYSSVSYPDNGMADPIPQAYFRPRPLENLVLADELNSFDPIVDA 421
Query: 174 VVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNL 232
V +L Q+ G S R++R+G+ +EE +LPGI +W + + +
Sbjct: 422 KVTNLLNTDTPQIFAACGRGARSSFRMLRHGLDVEETVSSELPGIPNAVWTVKLKADDQY 481
Query: 233 DNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
D ++LSFV T VL++ G +EE GF S T + ++LQV P +
Sbjct: 482 DAYIILSFVNGTLVLSI-GETIEEVSDTGFLSSSPTIAVQQIGEDSLLQVYPHG--IRHV 538
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRALEYEV 349
S RV+ W P +I + N QV A VY+ L++ G + ++L V
Sbjct: 539 LSDRRVNEWRCPQHTTIVAATTNSRQVAIALSSAQLVYFELDLEGQLNEYQDRKSLGSGV 598
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGG------ 400
+ I+ E + AVG D + R++SL +LE + + L
Sbjct: 599 LAMSIA-----EVPEGRQRTPYLAVGC-EDQTVRIISLDPDTTLENISLQALTAPPSSIC 652
Query: 401 --EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR 458
EI+ SI + ++ + L +G + LDP +G+LTD + LG++P L
Sbjct: 653 VAEIMDASIDKN--QPTMFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGSRPVRLIRVN 710
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSL-ALATDSTFTF 517
++ A S R + Y+ + L F+ + + + S +AE PD L ++ + F
Sbjct: 711 VHGLPSILALSSRSWLNYTYQNLLHFTPLIFDPLEYAWSFSAELCPDGLIGISGNVLRIF 770
Query: 518 GTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
+ QKL +PL PR++ + + F VI
Sbjct: 771 QVPNLGQKLKQDVIPLSYTPRKMLQHPTERLFYVI 805
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 6/171 (3%)
Query: 1027 EYALSLISSKFGEDPNTYF-VLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082
E A SL + F P F V+GTA +V P+ + R D L+ + + E+
Sbjct: 877 EAAFSLAITTFIARPGELFLVVGTAQDVIVSPKSCKSGFLRTYKISEDGRSLEFLHKTEV 936
Query: 1083 KGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALF-LKVKGDFILVGD 1141
++ F G+L+A I +R+F+ ++ LR +C + + A+ L +G I+VGD
Sbjct: 937 DDVPLALLSFQGRLVAGIGKALRIFDMGKKRLLR-KCENKSFATAIVTLSTQGSRIIVGD 995
Query: 1142 LMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI 1192
+ S+ YK E + D P W+T+ ++D + + N+F+
Sbjct: 996 MAESIYFATYKPPENRLLIFADDSQPRWITASAMVDYDTVCAGDKFGNVFV 1046
Score = 42.0 bits (97), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 3 SLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
S R++R+G+ +EE +LPGI +W + + + D ++LSFV T VL++
Sbjct: 445 SFRMLRHGLDVEETVSSELPGIPNAVWTVKLKADDQYDAYIILSFVNGTLVLSI 498
>gi|357111224|ref|XP_003557414.1| PREDICTED: DNA damage-binding protein 1-like [Brachypodium
distachyon]
Length = 1356
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 125/538 (23%), Positives = 222/538 (41%), Gaps = 85/538 (15%)
Query: 125 LTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQG 184
L +++ G++ +GD +++L E+G V S N+ PI+D+ + D + Q
Sbjct: 443 LLWMNRGMIAGFVEMGDGMILQL-----EHGRLVH-KSSVQNVGPILDLAIADYHGEKQD 496
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACID--LPGIKGIWALSIGSPKNLDNTLVLSFVG 242
Q+ +CSG EGSLR+IRNGI +E+ + G+ G+W L + + LVL+FV
Sbjct: 497 QMFSCSGMCPEGSLRVIRNGINVEKLLRTEPIYQGVTGLWTLRMKRTDMYHSFLVLAFVE 556
Query: 243 HTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR----- 297
TR+L++ + + ++ GF D T CG + ++Q+ L + A
Sbjct: 557 ETRILSVGLSFNDISDAVGFQPDVCTLACGLIADGVLVQIHSKGVKLCLPTAYAHPEGAP 616
Query: 298 -----VSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVH-----GSEIKQLAHRALEY 347
W P S+ V N V + C +Y L V E+ ++ H L Y
Sbjct: 617 LTSPVCVDWYPDVTISVGAVGHNIVAVATSNPCCLYILSVRPLSSFQYELYEIQHVQLRY 676
Query: 348 EVACLDISPLSNEETSSEPAKAQLAAVG------LWTDISARLLSL-----PSLEEVCKE 396
EV+C+ I EE S A A G L + R+ ++ PS+E + E
Sbjct: 677 EVSCISIP----EEDSRRSPVAVRRAFGRGKRNNLPAKVDVRMFAVIGTHKPSVEVISLE 732
Query: 397 P-----------------LGGEI---IPRSILMTCFEGHCYLLVALGDGSMFYFSLDPAS 436
P G + IP S+ E Y+L L +G + F + +
Sbjct: 733 PGEAFMLLSIGSISVNNSFGAPVSGRIPESVRFVASE-RFYILAGLRNGMLLRFESETSE 791
Query: 437 GR-LTD---KKKVT--------------LGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS 478
L D K+ T +G P L + +++ SDR ++++S
Sbjct: 792 EHYLPDSFYKESSTHSVNTLLQLIAMRHIGITPVGLVPLSDSANSDIILLSDRSWLLHAS 851
Query: 479 NHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPR 538
H L +S+++ +H+ +++ P L ++ + ++L+ + + + PR
Sbjct: 852 RHSLAYSSISFLPASHVTPVSSMDCPSGLLFVAENCLHLVEMVHGKRLNAQKLSIEGTPR 911
Query: 539 RIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQ 596
++ Y S+T V+ T G T S+ + + T+ S +PG T +
Sbjct: 912 KVLYHSDSRTLLVMRT--------GLTGASCSSDIVQIDPNNGTLLSRFKCEPGETAK 961
Score = 43.5 bits (101), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEEHACID--LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLR+IRNGI +E+ + G+ G+W L + + LVL+FV TR+L++
Sbjct: 507 EGSLRVIRNGINVEKLLRTEPIYQGVTGLWTLRMKRTDMYHSFLVLAFVEETRILSV 563
>gi|229577321|ref|NP_001153352.1| splicing factor 3b, subunit 3 [Nasonia vitripennis]
Length = 1216
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/510 (22%), Positives = 211/510 (41%), Gaps = 60/510 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E + V E K++ + + + L G +FV S G+ L ++
Sbjct: 308 GDIFKITLETDEDV-----VTEIKLKYFDTVPVANSMCVLKTGFLFVASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
D+ + S M + +L+PI+ V DL + Q
Sbjct: 363 HLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G +LR++R+G+ + E A +LPG +W + + D +++SFV T
Sbjct: 423 LYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADK--RVNEWKAP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ G + + + EV C+ + ++ E
Sbjct: 540 GKKTIIKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAAGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTC---------- 411
++ AVGL D + R++SL + C P + +P + C
Sbjct: 600 Q-----RSWFLAVGL-QDNTVRIISLDPSD--CLAPRSMQALPAAAESLCIVEMGIKDDT 651
Query: 412 ------FEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNV 465
+ +L + L +G + LDP SG L+D + LG++P L R V
Sbjct: 652 SEDSNQMQSTLHLNIGLQNGVLLRTVLDPISGDLSDTRTRYLGSRPVKLFRIRMQGNQAV 711
Query: 466 FACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQK 525
A S R + Y ++ + ++ + ++E P+ + + +T ++++
Sbjct: 712 LAMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGA 771
Query: 526 LHIR-TVPLGEAPRRIAYQESSQTFGVITT 554
+ + + P PR+ S +I T
Sbjct: 772 VFNQVSFPFEYTPRKFVIHNESAHVLLIET 801
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 1088 SMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSL 1146
++C + G++L + +RL++ +K LR E H N + + + G I V D+ S+
Sbjct: 950 AICPYQGRVLVGVGKMLRLYDMGKKKLLRKCENKHIPNAV-ICINAIGQRIYVSDVQESV 1008
Query: 1147 TLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDED 1204
++YK E + D +P W+T+ +LD + A+ N+ + + S+ D D
Sbjct: 1009 YAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLASSINDDVD 1066
>gi|351712542|gb|EHB15461.1| Splicing factor 3B subunit 3 [Heterocephalus glaber]
Length = 1240
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 182/417 (43%), Gaps = 33/417 (7%)
Query: 160 VMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-I 218
+++ +L+PI+ + DL + QL G SLR++R+G+ + E A +LPG
Sbjct: 378 LVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNP 437
Query: 219 KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRT 278
+W + D +++SFV T VL++ G VEE GF T C +
Sbjct: 438 NAVWTVRRHIEDEFDAYIIVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDA 496
Query: 279 VLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-E 336
++QV P I + RV+ W+ P K+I + N+ QV+ A TG ++ Y E+ S +
Sbjct: 497 LVQVYPDGIRHIRADK--RVNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQ 554
Query: 337 IKQLAHRA-LEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCK 395
+ + R + +V C+ ++ + E +++ AVGL D + R++SL + C
Sbjct: 555 LNEYTERKEMSADVVCMSLANVPPGEQ-----RSRFLAVGL-VDNTVRIISLDPSD--CL 606
Query: 396 EPLGGEIIPRSILMTCFE-----------------GHCYLLVALGDGSMFYFSLDPASGR 438
+PL + +P C G YL + L +G + LDP +G
Sbjct: 607 QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGD 666
Query: 439 LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSL 498
L+D + LG++P L R V A S R + YS + + ++ +
Sbjct: 667 LSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGF 726
Query: 499 NAESYPDSLALATDSTFTFGTIDEIQKLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+E P+ + + +T ++++ + + PL PR+ S +I T
Sbjct: 727 ASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIET 783
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 1054 PEENEPKQGRIII------FHYDDGKLQQIAEKEIKGAC----YSMCEFNGKLLASINST 1103
P P QGR++I YD GK + + + E K ++ F G++L +
Sbjct: 930 PAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKTPVEEVPAAIAPFQGRVLIGVGKL 989
Query: 1104 VRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEIS 1162
+R+++ +K LR E H N I+ ++ G ++V D+ S ++YK E +
Sbjct: 990 LRVYDLGKKKLLRKCENKHIANYIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFA 1048
Query: 1163 RDYNPNWMTSIEILDDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
D P W+T+ +LD + GA+ N+ + + ++ DED T
Sbjct: 1049 DDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPT 1094
>gi|449459948|ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
gi|449513493|ref|XP_004164340.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
Length = 1214
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 219/517 (42%), Gaps = 60/517 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE SVKE K++ I + + L +G +F S G+
Sbjct: 297 FLLQTEYGDIFKVTLEHNND-----SVKELKIKYFDTIPVTASMCVLKSGFLFAASEFGN 351
Query: 142 SQLVK---LNRSPDENGTYVSVMES----------------------FTNLAPIIDMVVV 176
L + + D + ++ME+ +L PI+DM ++
Sbjct: 352 HSLYQFQAIGEDADVESSSATLMETEEGFQPVFFQPRRLKNLMRIDQVESLMPIMDMKII 411
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNT 235
+L + Q+ T G SLRI+R G+ I E A +LPG+ +W + D
Sbjct: 412 NLFEEETPQIFTLCGRGPRSSLRILRPGLAISEMAVSELPGVPSAVWTVKKNINDEFDAY 471
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+V+SF T VL++ G VEE GF + + +++QV P+ I +
Sbjct: 472 IVVSFANATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIRED-- 528
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLD 353
R++ W P ++I V N+ QV+ A +G ++ Y EV + ++ ++ + +VACLD
Sbjct: 529 GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLD 588
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILM- 409
I+P+ +++ AVG + D + R+LSL + C + L + + P S+L
Sbjct: 589 IAPVPEGRQ-----RSRFLAVGSY-DNTIRILSLDP--DDCMQILSVQSVSAAPESLLFL 640
Query: 410 -----------TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR 458
+L AL G +F +D +G+L+D + LG + L +
Sbjct: 641 EVLASVGGEDGADHPASLFLNAALHSGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSVV 700
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFG 518
+ S RP + Y + + ++ + + S +++ + + +
Sbjct: 701 LRGRRAILCLSSRPWLGYIHQGHFLLTPLSYETLEYASSFSSDQCAEGVVAVAGNFLRVF 760
Query: 519 TIDEIQKLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
TI+ + + TV PL PR+ Q + VI +
Sbjct: 761 TIERLGETFNETVIPLRYTPRKFVLQPRRKLLVVIES 797
Score = 59.7 bits (143), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 1062 GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LE 1118
G I I+ + +DGK L+ + + +++G ++ +F G+LLA + S +RL++ + LR E
Sbjct: 921 GYIHIYRFLEDGKSLELLHKTQVEGVPLALAQFQGRLLAGLGSVLRLYDLGKRRLLRKCE 980
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
F N I + ++ D I VGD+ S +Y+ E + D P W+T+ +D
Sbjct: 981 NKLFPNTI-VSIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHVDF 1039
Query: 1179 ELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
+ GA+ N++ + +D + +ED T
Sbjct: 1040 DTMAGADKFGNIYFVRLPQDVSDEIEEDPT 1069
>gi|392570042|gb|EIW63215.1| hypothetical protein TRAVEDRAFT_161375 [Trametes versicolor
FP-101664 SS1]
Length = 1213
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 218/507 (42%), Gaps = 64/507 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G L+ + +E EE+ VK K++ + + L L +G +FV S G+
Sbjct: 307 FLLQSEEGDLYKVTIEHEEQ-----DVKAVKIKYFDTVPVASSLCILKSGFLFVASEFGN 361
Query: 142 SQLVKLNRSPDENG----------TY---------------------VSVMESFTNLAPI 170
+ + D++ +Y +++++ +L PI
Sbjct: 362 HYFYQFQKLGDDDNEPEWSSADYPSYGMADPSTPLPRGYFRPRALDNLTLVDELESLCPI 421
Query: 171 IDMVVVDL-ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGS 228
ID V++L Q+ T G + R +R+G+ +EE DLPGI +W +
Sbjct: 422 IDSKVMNLLPNSDTPQIFTACGRGARSTFRTLRHGLEVEEVVSSDLPGIPNAVWTTKLKE 481
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
D+ ++LSFV T VL++ G +EE + GF S T + +LQV P
Sbjct: 482 DDLYDSYIILSFVNGTLVLSI-GETIEEVQDTGFLSSAPTLAVQQIGADALLQVYPHG-- 538
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRAL 345
+ + RV+ W+ P+GK+I + NK QV+ A VY+ L++ G + +A+
Sbjct: 539 IRHVLADRRVNEWKVPSGKTIVCATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAM 598
Query: 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEI 402
V L ++ E + AVG D + R++SL +LE + + L
Sbjct: 599 GSTVLALSVA-----EVPEGRQRTPYLAVGC-EDQTVRIVSLDPESTLETISLQALTAP- 651
Query: 403 IPRSILMTCF--------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVL 454
P +I + + ++ + L +G + LDP +G+LTD + LGT+P L
Sbjct: 652 -PSAICIADMLDASINKSQPTTFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPIRL 710
Query: 455 KTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST 514
+ A S RP + Y+ + + F+ + +++ S +AE + L + S
Sbjct: 711 LRVNIQQNPAILALSSRPWLNYTYQNFMHFTPLIFENLDYAWSFSAELCTEGLIGISGSL 770
Query: 515 FTFGTIDEI-QKLHIRTVPLGEAPRRI 540
I ++ KL ++PL PR+
Sbjct: 771 LRIFQIPKLGTKLKQDSLPLSYTPRKF 797
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT-YFVLGTA---VVHPEENEPKQGRII 1065
++ +T +++H L E A S+ F N + V+GTA + P R
Sbjct: 867 LESSTVKVIH---LDNNEAAFSMAIVPFAARGNELHLVVGTAQDTFLSPRSCTSGFLRTY 923
Query: 1066 IFHYDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
F DDG+ L+ + + E ++ F GKL+A + ++RL++ +K LR +E F
Sbjct: 924 RF-IDDGRDLEFLHKTETSDVPLAVMAFQGKLIAGVGKSLRLYDVGKKKLLRKVENKGFP 982
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I + L +G I+VGD+ S+ YK E + D P W+T+ +LD +
Sbjct: 983 AAI-VTLNTQGSRIIVGDMQESVFYAVYKAPENRLLVFADDAQPRWVTATTMLDYNTVVA 1041
Query: 1184 AENSYNLFICQKDSAATS--DEDRT 1206
+ N+F+ + DS + D+D T
Sbjct: 1042 GDRFGNVFVNRLDSKISDQIDDDPT 1066
>gi|194864680|ref|XP_001971056.1| GG14635 [Drosophila erecta]
gi|190652839|gb|EDV50082.1| GG14635 [Drosophila erecta]
Length = 1227
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 208/511 (40%), Gaps = 70/511 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE ++ + V E K++ + + L G +FV S G+
Sbjct: 301 FLLQTEQGDIFKITLETDDDV-----VSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ + NL APII V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +LR++R+G+ + E A +LPG +W + + D ++
Sbjct: 416 ANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I S R
Sbjct: 476 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI--RSDKR 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDI 354
V+ W+ P KSI+ + N+ QV+ +G ++ Y E+ S E+ + R+ + E+ C+ +
Sbjct: 533 VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPSGELNEYTERSEMPAEIMCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ + E ++ AVGL D + R+LSL C P + +P C
Sbjct: 593 GTVPDGEQ-----RSWFLAVGL-ADNTVRILSLDP--NNCLTPCSMQALPSPAESLCLVE 644
Query: 413 ------------------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLG 448
+G YL + L +G + LDP SG L D + LG
Sbjct: 645 MGHTESTTQGALDDDAPAQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLG 704
Query: 449 TQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLA 508
++P L + V A S R + Y ++ + ++ + + ++E + +
Sbjct: 705 SRPVKLFRIKMQGAEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIV 764
Query: 509 LATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ +T ++++ + + PL PR
Sbjct: 765 AISTNTLRILALEKLGAVFNQVAFPLQYTPR 795
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 15/219 (6%)
Query: 1015 FEILHAHQLF-----PGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK--QGRIIIF 1067
+ +H +F E +S+ KF + + L + + P+ QG I
Sbjct: 878 LDAMHGQTMFNVPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDI 937
Query: 1068 HYDD---GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
+ D L+ + EI ++C F G+LLA +R++++ +K LR E H
Sbjct: 938 YKIDPTCSSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIP 997
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I + ++ G + V D+ S+ ++Y+ E + D +P W+T+ +LD +
Sbjct: 998 YQI-VNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAI 1056
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLV 1222
A+ NL I + + T D D GT L GL+
Sbjct: 1057 ADKFGNLSIQRLPHSVTDDVDE---DPTGTKSLWDRGLL 1092
>gi|405970223|gb|EKC35151.1| Splicing factor 3B subunit 3 [Crassostrea gigas]
Length = 1217
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/511 (22%), Positives = 211/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E ++ + + + L +G +F+ S G+ L ++
Sbjct: 308 GDIFKITLETDEDM-----VTEIILKYFDTVPVAANMCVLKSGFLFIASEFGNHYLYQIA 362
Query: 149 R--SPDENGTYVSV---------------------MESFTNLAPIIDMVVVDLERQGQGQ 185
+ DE + S ++ +L+PI + DL + Q
Sbjct: 363 QLGDDDEEPRFSSASQLEEGEPHFFSPRPLKNLVQVDEMDSLSPITHCQIADLANEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L T G +LR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 423 LYTLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKNIDDEFDAYIIVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++Q+ P I S RV+ W+ P
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLSCSQLGDDALVQIYPDGIRHI--RSDKRVNEWKTP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
KSI + N+ QV+ A TG ++ Y E+ G + + + EV C+ + + E
Sbjct: 540 GKKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSSEVVCMALGRVPVGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--------- 412
+ + AVGL +D + R++SL + C PL + +P C
Sbjct: 600 -----QRCRFLAVGL-SDNTVRIISLDPSD--CLSPLSMQALPEPSESLCIVEMGGTEAK 651
Query: 413 --------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G +L + L +G + LD +G L+D + LG +P L +
Sbjct: 652 EETGEPGTVGGLFLNIGLQNGVLLRTVLDNVTGDLSDTRTRYLGVRPVKLFRISMQGSEA 711
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + Y+ ++ + ++ + + +E P+ + + +T ++++
Sbjct: 712 VLAMSSRSWLSYTYQNRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLG 771
Query: 525 KLHIR-TVPLGEAPRRIAYQESSQTFGVITT 554
+ + + PL PR+ + VI T
Sbjct: 772 AVFNQVSHPLQHTPRKFVIHPETNNLIVIET 802
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVL-GTA---VVHPEENEPKQGRII 1065
I NT E + QL E S+ KF + FVL G A V++P G +
Sbjct: 872 ISGNTLEKI---QLEQNESVHSIALLKFASRGDDQFVLVGVARDLVLNPRS--LTGGFLY 926
Query: 1066 IFHYDDG--KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHF 1122
++ +DG L+ + + ++ ++ F G++L + +R+++ +K LR E
Sbjct: 927 LYQLEDGGESLKLLHKTPVEDVPGAIASFQGRVLIGVGRYLRIYDIGKKKMLRKCENKSI 986
Query: 1123 NNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFL 1182
N ++ V G+ I+ D+ S ++YK E + D NP W+T+ LD
Sbjct: 987 PNYVSAIHTV-GNRIIASDVQDSFHFVRYKRQENQLIVFADDTNPRWITASCSLDYNTVA 1045
Query: 1183 GAENSYNLFICQ--KDSAATSDEDRT 1206
GA+ N+ I + D + DED T
Sbjct: 1046 GADKFGNITIIRLPGDVSDDVDEDPT 1071
>gi|449704103|gb|EMD44407.1| DNA-repair binding protein, putative [Entamoeba histolytica KU27]
Length = 1088
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 133/236 (56%), Gaps = 16/236 (6%)
Query: 1002 VEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ 1061
VE H++ +ID EI +H+L E+ALS+ + D N FV+GTA P E EP
Sbjct: 735 VETHSVKLIDFRKMEIEDSHELKENEHALSI--EQIVIDENEMFVIGTAFAKPNEVEPSS 792
Query: 1062 GRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLA-SINSTVRLFEW----TN-EKEL 1115
GRI+I DG+L+ I EK++ GA YSM K LA SI + +FE+ TN E E+
Sbjct: 793 GRILIVQIKDGRLEIIFEKDVNGAVYSMKTLLKKYLAMSIEKKLVVFEYQRVITNGEFEV 852
Query: 1116 RLECSHFNNI--IALFLKVKGDFILVGDLMRSLTLLQYK---TMEGSFEEISRDYNPNWM 1170
+L+ N+ I L++K G+ ILVGDLM+S+++ + + E+SRD+ ++
Sbjct: 853 KLQEKGSCNVKLIGLYVKTLGNKILVGDLMKSISVYSFDNNGNNKNCLTEVSRDFYASYT 912
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGL-VQCR 1225
T+IE +D++ +L ++++ N+ I +S E R L +H VG+ + V C+
Sbjct: 913 TAIEFVDEDCYLSSDSNSNILIFNTNSTGNESE-RFRLNNCAHIH-VGECINVMCK 966
Score = 116 bits (290), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/475 (22%), Positives = 210/475 (44%), Gaps = 42/475 (8%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R LL D G++ ++ L++ + + + L +IP + YLDN V+F GS+ G
Sbjct: 266 RLLLSDNQGKMHLITLKENNNHEIELYYYPLEYQAL---TIPSTVLYLDNSVLFWGSKGG 322
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DS L+K+N E ++E+F N PI+DM + E + L+ C +++G+L++
Sbjct: 323 DSHLIKINEKGCE------ILETFENRGPILDMTAIHDEITNKDNLLMCCNTYQQGTLKL 376
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVE----- 255
I +G+GI+ ++ GI ++ +G + L++S+ ++V S EV
Sbjct: 377 ISSGVGIDIICQNEMKGITHLYQAEMGHKE----YLIISYGDGSKVFE-SQQEVNQLRFN 431
Query: 256 ETEMGGFTSDQQTFYCGNVD-----PRTVLQVTPSAAILISTESKARVSSWEPPNGKSIS 310
E E+ GF ++T G ++ +QVT + +E + K IS
Sbjct: 432 EIEIKGFNRKEETICSGIIEIGEMKESCFVQVTREEINIFDSEQLEFIQQIRF--NKFIS 489
Query: 311 VVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQ 370
SC ++ L + + + EIKQ+ + E +++ I E+
Sbjct: 490 H-SCIYDEKLYISQSNEINVLNENKEIKQVY--SGENDISAFTIGKEGTED--------- 537
Query: 371 LAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYF 430
+ + W + ++++ + + + G I +SI + + Y+++ +GDG + +
Sbjct: 538 VIGICYWDSNTMEIINMENGNKNHIREINGNIYGKSIEIINNQEGMYVVIGMGDGRVLVY 597
Query: 431 SLDP---ASGRLTDKKKV-TLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSN 486
++ G + KV +G LKT + DRPT++ K+ +
Sbjct: 598 QMEELMEIEGEIPKNYKVLDIGLSGIELKTLEINGMKYIMCLCDRPTLVSICKGKIKTLS 657
Query: 487 VNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIA 541
VN ++ + + +SL +AT G IDEIQ +H +++ +G RI
Sbjct: 658 VNCSEIVSIVPFKMKECMNSLVVATKENIIIGNIDEIQSIHTKSLSIGVFVSRIV 712
>gi|183232997|ref|XP_653855.2| damaged DNA binding protein [Entamoeba histolytica HM-1:IMSS]
gi|169801778|gb|EAL48469.2| damaged DNA binding protein, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 1088
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 133/236 (56%), Gaps = 16/236 (6%)
Query: 1002 VEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ 1061
VE H++ +ID EI +H+L E+ALS+ + D N FV+GTA P E EP
Sbjct: 735 VETHSVKLIDFRKMEIEDSHELKENEHALSI--EQIVIDENEMFVIGTAFAKPNEVEPSS 792
Query: 1062 GRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLA-SINSTVRLFEW----TN-EKEL 1115
GRI+I DG+L+ I EK++ GA YSM K LA SI + +FE+ TN E E+
Sbjct: 793 GRILIVQIKDGRLEIIFEKDVNGAVYSMKTLLKKYLAMSIEKKLVVFEYQRVITNGEFEV 852
Query: 1116 RLECSHFNNI--IALFLKVKGDFILVGDLMRSLTLLQYK---TMEGSFEEISRDYNPNWM 1170
+L+ N+ I L++K G+ ILVGDLM+S+++ + + E+SRD+ ++
Sbjct: 853 KLQEKGSCNVKLIGLYVKTLGNKILVGDLMKSISVYSFDNNGNNKNCLTEVSRDFYASYT 912
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGL-VQCR 1225
T+IE +D++ +L ++++ N+ I +S E R L +H VG+ + V C+
Sbjct: 913 TAIEFVDEDCYLSSDSNSNILIFNTNSTGNESE-RFRLNNCAHIH-VGECINVMCK 966
Score = 116 bits (290), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/475 (22%), Positives = 210/475 (44%), Gaps = 42/475 (8%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R LL D G++ ++ L++ + + + L +IP + YLDN V+F GS+ G
Sbjct: 266 RLLLSDNQGKMHLITLKENNNHEIELYYYPLEYQAL---TIPSTVLYLDNSVLFWGSKGG 322
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DS L+K+N E ++E+F N PI+DM + E + L+ C +++G+L++
Sbjct: 323 DSHLIKINEKGCE------ILETFENRGPILDMTAIHDEITNKDNLLMCCNTYQQGTLKL 376
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVE----- 255
I +G+GI+ ++ GI ++ +G + L++S+ ++V S EV
Sbjct: 377 ISSGVGIDIICQNEMKGITHLYQAEMGHKE----YLIISYGDGSKVFE-SQQEVNQLRFN 431
Query: 256 ETEMGGFTSDQQTFYCGNVD-----PRTVLQVTPSAAILISTESKARVSSWEPPNGKSIS 310
E E+ GF ++T G ++ +QVT + +E + K IS
Sbjct: 432 EIEIKGFNRKEETICSGIIEIGEMKESCFVQVTREEINIFDSEQLEFIQQIRF--NKFIS 489
Query: 311 VVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQ 370
SC ++ L + + + EIKQ+ + E +++ I E+
Sbjct: 490 H-SCIYDEKLYISQSNEINVLNENKEIKQVY--SGENDISAFTIGKEGTED--------- 537
Query: 371 LAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYF 430
+ + W + ++++ + + + G I +SI + + Y+++ +GDG + +
Sbjct: 538 VIGICYWDSNTMEIINMENGNKNHIREINGNIYGKSIEIINNQEGMYVVIGMGDGRVLVY 597
Query: 431 SLDP---ASGRLTDKKKV-TLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSN 486
++ G + KV +G LKT + DRPT++ K+ +
Sbjct: 598 QMEELMEIEGEIPKNYKVLDIGLSGIELKTLEINGMKYIMCLCDRPTLVSICKGKIKTLS 657
Query: 487 VNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIA 541
VN ++ + + +SL +AT G IDEIQ +H +++ +G RI
Sbjct: 658 VNCSEIVSIVPFKMKECMNSLVVATKENIIIGNIDEIQSIHTKSLSIGVFVSRIV 712
>gi|195586770|ref|XP_002083143.1| GD13507 [Drosophila simulans]
gi|194195152|gb|EDX08728.1| GD13507 [Drosophila simulans]
Length = 1227
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 209/511 (40%), Gaps = 70/511 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE ++ + V E K++ + + L G +FV S G+
Sbjct: 301 FLLQTEQGDIFKITLETDDDV-----VSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ + NL APII V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +LR++R+G+ + E A +LPG +W + + D ++
Sbjct: 416 ANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I S R
Sbjct: 476 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI--RSDKR 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDI 354
V+ W+ P KSI+ + N+ QV+ +G ++ Y E+ + E+ + R+ + E+ C+ +
Sbjct: 533 VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ E ++ AVGL +D + R+LSL C P + +P C
Sbjct: 593 GTVPEGEQ-----RSWFLAVGL-SDNTVRILSLDP--NNCLTPCSMQALPSPAESLCLVE 644
Query: 413 ------------------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLG 448
+G YL + L +G + LDP SG L D + LG
Sbjct: 645 MGHTESTTQGGLDDDAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLG 704
Query: 449 TQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLA 508
++P L + + V A S R + Y ++ + ++ + + ++E + +
Sbjct: 705 SRPVKLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIV 764
Query: 509 LATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ +T ++++ + + PL PR
Sbjct: 765 AISTNTLRILALEKLGAVFNQVAFPLQYTPR 795
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 15/219 (6%)
Query: 1015 FEILHAHQLFP-----GEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK--QGRIIIF 1067
+ +H +F E +S+ KF + + L + + P+ QG I
Sbjct: 878 LDAMHGQTMFSVPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDI 937
Query: 1068 HYDD---GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
+ D L+ + EI ++C F G+LLA +R++++ +K LR E H
Sbjct: 938 YKIDPTCSSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIP 997
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I + ++ G + V D+ S+ ++Y+ E + D +P W+T+ +LD +
Sbjct: 998 YQI-VNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAI 1056
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLV 1222
A+ NL I + + T D D GT L GL+
Sbjct: 1057 ADKFGNLSIQRLPHSVTDDVDE---DPTGTKSLWDRGLL 1092
>gi|168045572|ref|XP_001775251.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673464|gb|EDQ59987.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1201
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 124/518 (23%), Positives = 226/518 (43%), Gaps = 61/518 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + L+ D V E KV+ I + + L +G +F S G+
Sbjct: 284 FLLQTEYGDIFKVTLD----YDKDDQVTELKVKYFDTIPVTSAMCVLKSGFLFAASEFGN 339
Query: 142 SQLVKLNRSPDE------NGTYVSVMESFT-------------------NLAPIIDMVVV 176
L + D+ + T V E + +L PI+DM V
Sbjct: 340 HSLYQFQSIGDDPEVESSSSTLVETEEGYQPVFFQPRKLKNLVQIDDIESLMPIMDMKVA 399
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNT 235
++ + Q+ + G SLRI+R G+ + E A LPG+ +W + + D
Sbjct: 400 NIFEEETPQIFSLCGRGPRSSLRILRPGLAVTEMAVSPLPGVPSAVWTVKKHANDEFDAY 459
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+V+SFV T VL++ G VEE GF + + +++QV PS I S
Sbjct: 460 IVVSFVNATLVLSI-GETVEEVSDSGFLDTTPSLAISLLGDDSLMQVHPSGIRHI--RSD 516
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLD 353
R++ W+ P K+I V N+ QV+ A +G ++ Y E+ S ++ ++ R + +VACLD
Sbjct: 517 GRINEWKTPGKKTIVKVGYNRMQVVIALSGGELIYFEMDMSGQLMEIEKRDMTGDVACLD 576
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMT 410
I+P+ +++ AVG + D + R+LSL + C + L + + P S+L+
Sbjct: 577 IAPVPEGRQ-----RSRFLAVGSY-DSTIRILSLDP--DDCMQILSVQAVSSPPESLLLL 628
Query: 411 CFE------------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR 458
+ +L L +G + +D +G+L+D + LG + L +
Sbjct: 629 EVQASTGGEDGADHPASVFLNAGLQNGVLLRTEVDMVTGQLSDTRTRFLGLRAPKLFSAL 688
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTF 517
+ S RP + Y + + ++ + + S +++ + +A+A D+ F
Sbjct: 689 VRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRVF 748
Query: 518 GTIDEIQKLHIRT-VPLGEAPRRIAYQESSQTFGVITT 554
TI+ + + +T VPL PR+ +T ++ +
Sbjct: 749 -TIERLGETFNQTVVPLRYTPRKFILHPKQKTLIILES 785
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 8/198 (4%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDP--NTYFVLGTA--VVHPEENEP 1059
V + ++D T +L E A S+ + F ++ T +GTA + E
Sbjct: 846 VSCIRVLDPKTSTTTCLLELQENEAAFSICTVNFHDNKELGTLIAVGTAKDLQFMPRKEA 905
Query: 1060 KQGRIIIFHY-DDGKLQQIAEKE-IKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR- 1116
G I I+ + ++G++ ++ K + G ++C+F G+LL + +R+++ K LR
Sbjct: 906 SGGFIHIYRFAEEGRVLELVHKTPVDGVPTALCQFQGRLLVGVGQVLRIYDLGKRKLLRK 965
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
E +F N I + + GD I VGD+ S ++Y+ E + D P W+T+ +
Sbjct: 966 CENKNFPNTI-IAIHTYGDRIYVGDIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHI 1024
Query: 1177 DDELFLGAENSYNLFICQ 1194
D + GA+ N+++ +
Sbjct: 1025 DFDTMAGADKFGNVYVMR 1042
>gi|390357128|ref|XP_001198237.2| PREDICTED: splicing factor 3B subunit 3-like [Strongylocentrotus
purpuratus]
Length = 949
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/511 (22%), Positives = 213/511 (41%), Gaps = 61/511 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKL- 147
G +F + LE ++ M V E +++ + + + L G +F+ S G+ L ++
Sbjct: 40 GDIFKITLETDDDM-----VTEIRMKYFDTVPVATSMNVLKTGFLFIASEYGNHYLYQIA 94
Query: 148 ------------NRSPDENG-TYVSVMESFTNL---------APIIDMVVVDLERQGQGQ 185
+ +P E G T+ + NL +PI+ + DL + Q
Sbjct: 95 HLGDDDDEPEFSSATPLEEGDTFFFAPRTLRNLEEVDQLESLSPILSCQIADLASEDTPQ 154
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G S+R++R+G+ + E A +LPG +W + S D +++SFV T
Sbjct: 155 LYVACGRGPRSSMRVLRHGLEVSEMAVSELPGNPNAVWTVKKKSDDEYDAYIIVSFVNAT 214
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T + +LQ+ P I + RV+ W+ P
Sbjct: 215 LVLSI-GETVEEVTDSGFLGTTPTLSSSLIGDDALLQIYPDGIRHIRADK--RVNEWKTP 271
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
KSI + N+ QV+ A TG ++ Y E+ G + + + +V C+ ++ + + E
Sbjct: 272 GKKSIVKCAVNQRQVVIALTGGEMVYFEMDPTGQLNEYTERKEMNADVKCMSLATVPSGE 331
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF--------- 412
+A+ AVGL D + R++SL + C +PL + +P C
Sbjct: 332 -----QRARFLAVGL-DDNTVRVISLDQSD--CLQPLSMQALPAPAEALCIIEMGGTEAR 383
Query: 413 --------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G +L + L +G + LD +G L+D + LG++P L +
Sbjct: 384 EETGERGSSGGLFLNIGLQNGVLLRMVLDSVTGDLSDTRTRYLGSRPVKLFRINMQGSEA 443
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + Y + + ++ + +E P+ + + +T ++++
Sbjct: 444 VLAMSSRSWLSYWYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 503
Query: 525 KLHIR-TVPLGEAPRRIAYQESSQTFGVITT 554
+ + + L PR+ A + VI T
Sbjct: 504 AVFNQVSTQLKYTPRKFAVHLENNNIVVIET 534
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 115/261 (44%), Gaps = 13/261 (4%)
Query: 957 VKEPKVELLGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLL-IIDQNTF 1015
+ E VE GE K EM+ ++++ + + ++ A M LL + T
Sbjct: 551 MAEEMVEAAGEEEKELAAEMAE-AFLQEELPESTFSSPKAGSGMWASTIRLLNPVQGQTL 609
Query: 1016 EILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDD 1071
+++ Q E A SL KF + T+ ++GTA + P + +
Sbjct: 610 DMVELEQ---NEAAFSLALVKFANREDETHVLVGTAKDVTLSPRTCSGGAIHTYLLTEEG 666
Query: 1072 GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFL 1130
KL+ + + + S+ F G++L I +R+++ +K LR E H N I L
Sbjct: 667 KKLEFLHKTLVDDVPSSIAAFQGRVLIGIGRLLRIYDLGKKKLLRKCENKHIPNFITNIL 726
Query: 1131 KVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNL 1190
G+ +++ D+ SL L+YK E + D NP W+T+ +LD + + A+ N+
Sbjct: 727 TT-GNRVIISDVQESLHFLKYKRQENQMVIFADDSNPRWITATCLLDHDTVMCADKFGNI 785
Query: 1191 FICQKDSAATS--DEDRTHLQ 1209
+ + ++ DED T ++
Sbjct: 786 TVLRLPTSVNDNLDEDPTGVK 806
>gi|407044103|gb|EKE42371.1| DNA damage-binding protein, putative [Entamoeba nuttalli P19]
Length = 1088
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 133/236 (56%), Gaps = 16/236 (6%)
Query: 1002 VEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ 1061
VE H++ +ID EI +H+L E+ALS+ + D N FV+GTA P E EP
Sbjct: 735 VETHSVKLIDFRKMEIEDSHELKENEHALSI--EQIVIDENEMFVIGTAFAKPNEVEPSS 792
Query: 1062 GRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLA-SINSTVRLFEW----TN-EKEL 1115
GRI+I DG+L+ + EK++ GA YSM K LA SI + +FE+ TN E E+
Sbjct: 793 GRILIVQIKDGRLEIVFEKDVNGAVYSMKTLLKKYLAISIEKKLVVFEYQRVITNGEFEV 852
Query: 1116 RLECSHFNNI--IALFLKVKGDFILVGDLMRSLTLLQYK---TMEGSFEEISRDYNPNWM 1170
+L+ N+ I L++K G+ ILVGDLM+S+++ + + E+SRD+ ++
Sbjct: 853 KLQEKGSCNVKLIGLYVKTLGNKILVGDLMKSISVYSFDNNGNNKNCLTEVSRDFYASYT 912
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGL-VQCR 1225
T+IE +D++ +L ++++ N+ I +S E R L +H VG+ + V C+
Sbjct: 913 TAIEFVDEDCYLSSDSNSNILIFNTNSTGNESE-RFRLNNCAHIH-VGECINVMCK 966
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/475 (23%), Positives = 210/475 (44%), Gaps = 42/475 (8%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R LL D G++ ++ L++ K + + + L +IP + YLDN V+F GS+ G
Sbjct: 266 RLLLSDNQGKMHLITLKENNKHEIELYYYPLEYQAL---TIPSTVLYLDNSVLFWGSKGG 322
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DS L+K+N E ++E+F N PI+DM + E + L+ C +++G+L++
Sbjct: 323 DSHLIKINEKGCE------ILETFENRGPILDMTAIHDEITNKDNLLMCCNTYQQGTLKL 376
Query: 201 IRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVE----- 255
I +G+GI+ ++ GI ++ +G + L++S+ ++V S EV
Sbjct: 377 ISSGVGIDIICQNEMKGITHLYQAEMGHKE----YLIISYGDGSKVFE-SQQEVNQLRFN 431
Query: 256 ETEMGGFTSDQQTFYCGNVD-----PRTVLQVTPSAAILISTESKARVSSWEPPNGKSIS 310
E E+ GF ++T G ++ +QVT + +E + K IS
Sbjct: 432 EIEIKGFNRKEETICSGIIEIGEMKESCFVQVTREEINIFDSEQLELIQQIRL--NKFIS 489
Query: 311 VVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQ 370
SC ++ L + + + EIKQ+ + E +++ I E+
Sbjct: 490 H-SCIYDEKLYISQSNEINVLNENKEIKQVY--SGENDISAFTIGKEGTED--------- 537
Query: 371 LAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYF 430
+ + W + ++ + + + + G I +SI + + Y+++ +GDG + +
Sbjct: 538 VIGICYWDSNTMEIIKMENGNKNHIREINGNIYGKSIEIINNQEGMYVVIGMGDGRVLVY 597
Query: 431 SLDP---ASGRLTDKKKV-TLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSN 486
++ G + KV +G LKT + DRPT++ K+ +
Sbjct: 598 QMEELMEIEGEIPKNYKVLDIGLSGIELKTLEINGMKYIMCLCDRPTLVSICKGKIKTLS 657
Query: 487 VNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIA 541
VN ++ + + +SL +AT G IDEIQ +H +++ +G RI
Sbjct: 658 VNCSEIVSIVPFKMKECMNSLVVATKENIIIGNIDEIQSIHTKSLSIGVFVSRIV 712
>gi|326519701|dbj|BAK00223.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1360
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 120/526 (22%), Positives = 214/526 (40%), Gaps = 82/526 (15%)
Query: 103 DGTFSVKEPKVELLGEISIPE-------C--LTYLDNGVVFVGSRLGDSQLVKLNRSPDE 153
DG F + E + G +PE C L ++D G++ +GD ++ L E
Sbjct: 414 DGEFHILEFNWDTEGLKVLPERVRRGLPCKPLLWMDRGMIAGFVEMGDGMILHL-----E 468
Query: 154 NGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI 213
+G V + N+ P++D+ + D + Q QL +C G EGSLR+IRNG+ +E+
Sbjct: 469 HGGLVH-KSTVQNVGPMLDLAIADYHGEKQDQLFSCCGMCPEGSLRVIRNGVNVEKLLRT 527
Query: 214 D--LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+ GI G+W L + + LVL+FV TR+L++ + + ++ GF + T C
Sbjct: 528 EPIYQGITGLWTLRMKRTDTYHSFLVLAFVEETRILSVGLSFNDISDAVGFQPEVCTLAC 587
Query: 272 GNVDPRTVLQVTPSAAILISTESKAR----------VSSWEPPNGKSISVVSCNKNQVLC 321
G + ++Q+ L S A W P S+ V + V
Sbjct: 588 GLIADGLLVQIHSKGVKLCLPTSYAHPEGATLTSPVCVDWYPDVTISVGAVGHDVVAVAT 647
Query: 322 ATGCDVYYLEVH-----GSEIKQLAHRALEYEVACLDISPLSNEETSSEPA--------- 367
+ C +Y L V E+ + H L+YEV+C+ I + + A
Sbjct: 648 SNPCCLYILRVRPLSSLQYELYETQHVQLQYEVSCISIPEEDSRLRTPSSAIGGDFRERK 707
Query: 368 -------------------KAQLAAVGLWTDISARLLSLPSLE--EVCKEPLGGEIIPRS 406
K + + L D + RLLS S+ P+ G IP +
Sbjct: 708 GNNSVAEVNVRMFAVIGTHKPSVEVISLEPDEAFRLLSTGSISVNNALGAPVSG-CIPEN 766
Query: 407 ILMTCFEGHCYLLVALGDGSMFYF-----------------SLDPASGRLTDKKKVT-LG 448
+ + E Y+L L +G + F S P+ L + +G
Sbjct: 767 VRVVASE-RFYILAGLRNGMLLRFESGTSKDQYLPGSFYKESFAPSLNTLLQLVAIRHIG 825
Query: 449 TQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLA 508
P L R + +++ SDR ++++S H L +S+++ +H+ +++ P L
Sbjct: 826 ITPVGLVPLRDSANSDIIVLSDRSWLLHASRHSLAYSSISFLPASHVIPVSSVDCPSGLL 885
Query: 509 LATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
++ + ++L+ + +G PR++ Y S+T V+ T
Sbjct: 886 FVAENCLHLVEMVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVMRT 931
Score = 44.3 bits (103), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEEHACID--LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLR+IRNG+ +E+ + GI G+W L + + LVL+FV TR+L++
Sbjct: 509 EGSLRVIRNGVNVEKLLRTEPIYQGITGLWTLRMKRTDTYHSFLVLAFVEETRILSV 565
>gi|340959394|gb|EGS20575.1| putative pre-mRNA splicing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1213
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 138/548 (25%), Positives = 230/548 (41%), Gaps = 71/548 (12%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLE--KEEKMDGTFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ ++EK + T VK K++ +
Sbjct: 298 MHKLKG--SAGAFF------FLLQTEDGDLFKVTIDMVEDEKGNPTGEVKRVKIKYFDTV 349
Query: 120 SIPECLTYLDNGVVFVGSRLGDS---QLVKLNRSPDE------------NGTYVSV---- 160
I L L +G +FV S G+ Q KL DE N Y V
Sbjct: 350 PIAHSLCILKSGFLFVASEFGNHHFYQFEKLGDDDDEPEFTSDDFPADWNAPYNPVYFKP 409
Query: 161 --------MESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+ES ++ P++ V +L + Q+ G S R++++G+ + E
Sbjct: 410 RPLENLVLVESIDSMNPLVGCKVANLTGEDAPQIYAICGNGARSSFRMLKHGLEVSEIVA 469
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPG +W + D +VLSF T VL++ G VEE GF + T
Sbjct: 470 SELPGTPSAVWTTKLTKYDEYDAYIVLSFTNATLVLSI-GETVEEVSDSGFLTTVPTLAV 528
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++Q+ P I + RV+ W P +SI + N+NQV+ A +G VY+
Sbjct: 529 QQMGEEGLIQIHPKG---IRHIVQGRVNEWPAPQHRSIVAATTNENQVVIALSSGEIVYF 585
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V L + + ++ AVG D + R+LSL
Sbjct: 586 EMDADGSLAEYDEKKQMSGTVTSLSLG-----KVPEGLRRSSFLAVGC-DDCTVRILSLD 639
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC-----YLLVALGDGSMFYFSLDPASGRLT 440
+LE + L P S+L+ E YL + L G LD +G LT
Sbjct: 640 PESTLEMKSIQALTAA--PSSLLIMSMEDSTGGTTLYLHIGLHSGVYLRTVLDEITGELT 697
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCSL 498
D ++ LG +PT L + T V A S RP + Y++ V + ++ ++ + S
Sbjct: 698 DTRQKFLGPKPTKLFQVTVQNQTCVLALSSRPWLGYTAPITRNFVMTPLSYTELGYTWSF 757
Query: 499 NAESYPDSLALATDSTFTFGTIDEIQKLHI-RTVPLGEAPRRIAYQESSQTFGVITTRID 557
N+E + + + TI+++ + I ++ PL P+R+ F VI
Sbjct: 758 NSEQCQEGMVGIHANYLRIFTIEKLGQTMIQKSCPLTYTPKRLVKHPEQPYFYVI----- 812
Query: 558 IQEADGST 565
EAD +T
Sbjct: 813 --EADNNT 818
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
Query: 1017 ILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHY-DD 1071
+L +L E A+S F +D ++ ++GT V++P + +G I ++ + DD
Sbjct: 872 VLKRIELEGNEAAVSAAVVPFASQDGESFLIVGTGKDMVLNPRAS--TEGAIHVYRFIDD 929
Query: 1072 GK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFL 1130
G+ L+ I + I+ + C F G+LLA I +R+++ ++ LR + + + + L
Sbjct: 930 GRDLEFIHKTIIEEPPLAFCPFQGRLLAGIGKMLRIYDLGLKQLLRKAQAEVSPQLIVSL 989
Query: 1131 KVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNL 1190
+ + I+VGD+ +T + YK + D W T ++D E G + NL
Sbjct: 990 DTRHNRIVVGDVQHGMTYVVYKPDSNKLIPFADDTIARWTTCTTMVDYESVAGGDKFGNL 1049
Query: 1191 FI--CQKDSAATSDEDRTHLQ 1209
+I C + ++ SDE + +Q
Sbjct: 1050 WIVRCPERASLESDEPGSEVQ 1070
>gi|326510951|dbj|BAJ91823.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1360
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 120/526 (22%), Positives = 214/526 (40%), Gaps = 82/526 (15%)
Query: 103 DGTFSVKEPKVELLGEISIPE-------C--LTYLDNGVVFVGSRLGDSQLVKLNRSPDE 153
DG F + E + G +PE C L ++D G++ +GD ++ L E
Sbjct: 414 DGEFHILEFNWDTEGLKVLPERVRRGLPCKPLLWMDRGMIAGFVEMGDGMILHL-----E 468
Query: 154 NGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI 213
+G V + N+ P++D+ + D + Q QL +C G EGSLR+IRNG+ +E+
Sbjct: 469 HGGLVH-KSTVQNVGPMLDLAIADYHGEKQDQLFSCCGMCPEGSLRVIRNGVNVEKLLRT 527
Query: 214 D--LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+ GI G+W L + + LVL+FV TR+L++ + + ++ GF + T C
Sbjct: 528 EPIYQGITGLWTLRMKRTDTYHSFLVLAFVEETRILSVGLSFNDISDAVGFQPEVCTLAC 587
Query: 272 GNVDPRTVLQVTPSAAILISTESKAR----------VSSWEPPNGKSISVVSCNKNQVLC 321
G + ++Q+ L S A W P S+ V + V
Sbjct: 588 GLIADGLLVQIHSKGVKLCLPTSYAHPEGATLTSPVCVDWYPDVTISVGAVGHDVVAVAT 647
Query: 322 ATGCDVYYLEVH-----GSEIKQLAHRALEYEVACLDISPLSNEETSSEPA--------- 367
+ C +Y L V E+ + H L+YEV+C+ I + + A
Sbjct: 648 SNPCCLYILRVRPLSSLQYELYETQHVQLQYEVSCISIPEEDSRLRTPSSAIGGDFRERK 707
Query: 368 -------------------KAQLAAVGLWTDISARLLSLPSLE--EVCKEPLGGEIIPRS 406
K + + L D + RLLS S+ P+ G IP +
Sbjct: 708 GNNSVAEVNVRMFAVIGTHKPSVEVISLEPDEAFRLLSTGSISVNNALGAPVSG-CIPEN 766
Query: 407 ILMTCFEGHCYLLVALGDGSMFYF-----------------SLDPASGRLTDKKKVT-LG 448
+ + E Y+L L +G + F S P+ L + +G
Sbjct: 767 VRVVASE-RFYILAGLRNGMLLRFESGTSKDQYLPGSFYKESFAPSLNTLLQLVAIRHIG 825
Query: 449 TQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLA 508
P L R + +++ SDR ++++S H L +S+++ +H+ +++ P L
Sbjct: 826 ITPVGLVPLRDSANSDIIVLSDRSWLLHASRHSLAYSSISFLPASHVIPVSSVDCPSGLL 885
Query: 509 LATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
++ + ++L+ + +G PR++ Y S+T V+ T
Sbjct: 886 FVAENCLHLVEMVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVMRT 931
Score = 44.3 bits (103), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEEHACID--LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLR+IRNG+ +E+ + GI G+W L + + LVL+FV TR+L++
Sbjct: 509 EGSLRVIRNGVNVEKLLRTEPIYQGITGLWTLRMKRTDTYHSFLVLAFVEETRILSV 565
>gi|60677959|gb|AAX33486.1| RE01065p [Drosophila melanogaster]
Length = 1227
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 208/511 (40%), Gaps = 70/511 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE ++ + V E K++ + + L G +FV S G+
Sbjct: 301 FLLQTEQGDIFKITLETDDDV-----VSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ + NL APII V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +LR++R+G+ + E A +LPG +W + + D ++
Sbjct: 416 ANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I S R
Sbjct: 476 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI--RSDKR 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDI 354
V+ W+ P KSI+ + N+ QV+ +G ++ Y E+ + E+ + R+ + E+ C+ +
Sbjct: 533 VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ E ++ AVGL D + R+LSL C P + +P C
Sbjct: 593 GTVPEGEQ-----RSWFLAVGL-ADNTVRILSLDP--NNCLTPCSMQALPSPAESLCLVE 644
Query: 413 ------------------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLG 448
+G YL + L +G + LDP SG L D + LG
Sbjct: 645 MGHTESTTQGGLDDDAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLG 704
Query: 449 TQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLA 508
++P L + + V A S R + Y ++ + ++ + + ++E + +
Sbjct: 705 SRPVKLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIV 764
Query: 509 LATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ +T ++++ + + PL PR
Sbjct: 765 AISTNTLRILALEKLGAVFNQVAFPLQYTPR 795
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 15/219 (6%)
Query: 1015 FEILHAHQLFP-----GEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK--QGRIIIF 1067
+ +H +F E +S+ KF + + L + + P+ QG I
Sbjct: 878 LDAMHGQTMFSVPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDI 937
Query: 1068 HYDD---GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
+ D L+ + +I ++C F G+LLA +R++++ +K LR E H
Sbjct: 938 YKIDPTCSSLEFMHRTDIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIP 997
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I + ++ G + V D+ S+ ++Y+ E + D +P W+T+ +LD +
Sbjct: 998 YQI-VNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAI 1056
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLV 1222
A+ NL I + + T D D GT L GL+
Sbjct: 1057 ADKFGNLSIQRLPHSVTDDVDE---DPTGTKSLWDRGLL 1092
>gi|195336406|ref|XP_002034829.1| GM14250 [Drosophila sechellia]
gi|194127922|gb|EDW49965.1| GM14250 [Drosophila sechellia]
Length = 1227
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 208/511 (40%), Gaps = 70/511 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE ++ + V E K++ + + L G +FV S G+
Sbjct: 301 FLLQTEQGDIFKITLETDDDV-----VSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ + NL APII V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +LR++R+G+ + E A +LPG +W + + D ++
Sbjct: 416 ANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I S R
Sbjct: 476 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI--RSDKR 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDI 354
V+ W+ P KSI+ + N+ QV+ +G ++ Y E+ + E+ + R+ + E+ C+ +
Sbjct: 533 VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ E ++ AVGL D + R+LSL C P + +P C
Sbjct: 593 GTVPEGEQ-----RSWFLAVGL-ADNTVRILSLDP--NNCLTPCSMQALPSPAESLCLVE 644
Query: 413 ------------------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLG 448
+G YL + L +G + LDP SG L D + LG
Sbjct: 645 MGHTESTTQGGLDDDAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLG 704
Query: 449 TQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLA 508
++P L + + V A S R + Y ++ + ++ + + ++E + +
Sbjct: 705 SRPVKLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIV 764
Query: 509 LATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ +T ++++ + + PL PR
Sbjct: 765 AISTNTLRILALEKLGAVFNQVAFPLQYTPR 795
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 15/219 (6%)
Query: 1015 FEILHAHQLFP-----GEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK--QGRIIIF 1067
+ +H +F E +S+ KF + + L + + P+ QG I
Sbjct: 878 LDAMHGQTMFSVPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDI 937
Query: 1068 HYDD---GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
+ D L+ + EI ++C F G+LLA +R++++ +K LR E H
Sbjct: 938 YKIDPTCSSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIP 997
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I + ++ G + V D+ S+ ++Y+ E + D +P W+T+ +LD +
Sbjct: 998 YQI-VNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAI 1056
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLV 1222
A+ NL I + + T D D GT L GL+
Sbjct: 1057 ADKFGNLSIQRLPHSVTDDVDE---DPTGTKSLWDRGLL 1092
>gi|24654874|ref|NP_728546.1| CG13900, isoform A [Drosophila melanogaster]
gi|23092721|gb|AAF47416.2| CG13900, isoform A [Drosophila melanogaster]
gi|60678131|gb|AAX33572.1| LD01809p [Drosophila melanogaster]
gi|220950356|gb|ACL87721.1| CG13900-PA [synthetic construct]
gi|289803030|gb|ADD20765.1| FI04459p [Drosophila melanogaster]
Length = 1227
Score = 120 bits (301), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 208/511 (40%), Gaps = 70/511 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE ++ + V E K++ + + L G +FV S G+
Sbjct: 301 FLLQTEQGDIFKITLETDDDV-----VSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ + NL APII V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +LR++R+G+ + E A +LPG +W + + D ++
Sbjct: 416 ANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I S R
Sbjct: 476 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI--RSDKR 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDI 354
V+ W+ P KSI+ + N+ QV+ +G ++ Y E+ + E+ + R+ + E+ C+ +
Sbjct: 533 VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ E ++ AVGL D + R+LSL C P + +P C
Sbjct: 593 GTVPEGEQ-----RSWFLAVGL-ADNTVRILSLDP--NNCLTPCSMQALPSPAESLCLVE 644
Query: 413 ------------------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLG 448
+G YL + L +G + LDP SG L D + LG
Sbjct: 645 MGHTESTTQGGLDDDAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLG 704
Query: 449 TQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLA 508
++P L + + V A S R + Y ++ + ++ + + ++E + +
Sbjct: 705 SRPVKLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIV 764
Query: 509 LATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ +T ++++ + + PL PR
Sbjct: 765 AISTNTLRILALEKLGAVFNQVAFPLQYTPR 795
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 1081 EIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILV 1139
EI GA +C F G+LLA +R++++ +K LR E H I + ++ G + V
Sbjct: 957 EIPGA---LCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQI-VNIQAMGHRVYV 1012
Query: 1140 GDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAA 1199
D+ S+ ++Y+ E + D +P W+T+ +LD + A+ NL I + +
Sbjct: 1013 SDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSV 1072
Query: 1200 TSDEDRTHLQEVGTVHLVGDGLV 1222
T D D GT L GL+
Sbjct: 1073 TDDVDE---DPTGTKSLWDRGLL 1092
>gi|31213215|ref|XP_315551.1| AGAP005549-PA [Anopheles gambiae str. PEST]
gi|21299714|gb|EAA11859.1| AGAP005549-PA [Anopheles gambiae str. PEST]
Length = 1217
Score = 120 bits (301), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 126/569 (22%), Positives = 228/569 (40%), Gaps = 74/569 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G +F + LE ++ + V E K++ + + L G +FV G+
Sbjct: 301 FLVQTEQGDIFKVTLETDDDV-----VSEIKLKYFDTVPPATAMCVLKTGFLFVACEFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ NL API+ V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRQLKNLVMVDDIPSYAPILGCQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G S+R++R+G+ + E A +LPG +W + D ++
Sbjct: 416 ANEDTPQLYLACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I + R
Sbjct: 476 VSFVNATLVLSI-GDTVEEVTDSGFLGTTPTLCCSALGDDALVQVYPDGIRHIRADK--R 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDI 354
V+ W+ P K+I + N+ QV+ A +G ++ Y E+ G + + + EV C+ +
Sbjct: 533 VNEWKAPGKKTIMKCAVNQRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSEVMCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ + E ++ AVGL D + R++SL + C P + +P + C
Sbjct: 593 GSVPSGEQ-----RSWFLAVGL-ADNTVRIISLDPTD--CLSPRSMQALPSAAESLCIVE 644
Query: 413 ----------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKT 456
G YL + L +G + LDP SG L D + LG++P L
Sbjct: 645 MGTVETSSEDDGVTITTGCIYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFR 704
Query: 457 FRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFT 516
+ + V A S R + Y ++ + ++ + + ++E + + + +T
Sbjct: 705 IQMQGSEAVLAMSSRSWLSYYYQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLR 764
Query: 517 FGTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQA 575
++++ + + T PL P+R A + T ++ I E D + + + +
Sbjct: 765 ILALEKLGAVFNQITFPLEYTPKRFAIHQE-------TGKLIISETDHNAYTEETKTVRK 817
Query: 576 QNTTSSTISSLSYIKPGSTKQSTANQPAD 604
+ + G +Q AN+ AD
Sbjct: 818 KQMADEMREA-----AGEDEQELANEMAD 841
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 9/189 (4%)
Query: 1022 QLFPGEYALSLISSKFGEDPNTYFVLGTAV---VHPEENEPKQGRIIIFHYDDG--KLQQ 1076
QL E LSL +F D Y V G A ++P+ + G I ++ D +L+
Sbjct: 882 QLAQNEAVLSLALVRFAVDQKWYVVAGVAKDLQINPKIS--GGGFIDVYKVDSQTHQLEH 939
Query: 1077 IAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGD 1135
+ EI A ++C F G+LLA I +R+++ +K LR E H N I + ++ G
Sbjct: 940 MHRTEIDDAPGALCPFQGRLLAGIGKVLRIYDLGKKKLLRKCENKHIPNQI-VNIQGMGQ 998
Query: 1136 FILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQK 1195
+ V D+ S+ ++YK E + D +P W+TS +LD + + N+ I +
Sbjct: 999 RVYVSDVQESVYCIKYKRAENQLIIFADDTHPRWITSASLLDYDTVATGDKFGNIAILRL 1058
Query: 1196 DSAATSDED 1204
+ + D D
Sbjct: 1059 PHSVSDDVD 1067
>gi|125977518|ref|XP_001352792.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
gi|54641542|gb|EAL30292.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
Length = 1228
Score = 120 bits (301), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 208/512 (40%), Gaps = 71/512 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE ++ + V E K++ + + L G +FV S G+
Sbjct: 301 FLLQTEQGDIFKITLETDDDV-----VSEIKLKYFDTVPPASAMCVLKTGFLFVASEFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ + NL APII V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRTLKNLVLVDELPSFAPIITSQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +LR++R+G+ + E A +LPG +W + + D ++
Sbjct: 416 ANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I S R
Sbjct: 476 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI--RSDKR 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDI 354
V+ W+ P KSI+ + N+ QV+ +G ++ Y E+ + E+ + R+ + E+ C+ +
Sbjct: 533 VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ + E ++ AVGL D + R+LSL C P + +P C
Sbjct: 593 GTVPDGEQ-----RSWFLAVGL-ADNTVRILSLDP--NNCLTPCSMQALPSPAESLCLVE 644
Query: 413 -------------------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTL 447
+G YL + L +G + LDP SG L D + L
Sbjct: 645 MGHTESTTSAGALDDDAPPQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYL 704
Query: 448 GTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSL 507
G++P L + V A S R + Y ++ + ++ + + ++E + +
Sbjct: 705 GSRPVKLFRIKMQGAEAVLAMSSRSWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGI 764
Query: 508 ALATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ +T ++++ + + PL PR
Sbjct: 765 VAISTNTLRILALEKLGAVFNQVAFPLQFTPR 796
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 15/219 (6%)
Query: 1015 FEILHAHQLFP-----GEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK--QGRIIIF 1067
+ +H +F E +S+ KF + + L + + P+ QG +
Sbjct: 879 LDAMHGQTMFSVSLTQNEAIMSMAMVKFSVAADGRYYLAVGIARDLQLNPRISQGGCLDI 938
Query: 1068 HYDD---GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
+ D L+ + EI ++C F G+LLA +R+++ +K LR E H
Sbjct: 939 YKIDPTCSSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIP 998
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I + ++ G + V D+ S+ L+Y+ E + D +P W+T+ +LD +
Sbjct: 999 YQI-VNIQAMGHRVYVSDVQESVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAI 1057
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLV 1222
A+ NL I + + T D D GT L GL+
Sbjct: 1058 ADKFGNLSIQRLPHSVTDDVDE---DPTGTKSLWDRGLL 1093
>gi|194749950|ref|XP_001957397.1| GF24063 [Drosophila ananassae]
gi|190624679|gb|EDV40203.1| GF24063 [Drosophila ananassae]
Length = 1228
Score = 120 bits (300), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 208/512 (40%), Gaps = 71/512 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE ++ + V E K++ + + L G +FV S G+
Sbjct: 301 FLLQTEQGDIFKITLETDDDV-----VSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ + NL APII V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +LR++R+G+ + E A +LPG +W + + D ++
Sbjct: 416 ANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I S R
Sbjct: 476 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI--RSDKR 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDI 354
V+ W+ P KSI+ + N+ QV+ +G ++ Y E+ + E+ + R+ + E+ C+ +
Sbjct: 533 VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ E ++ AVGL D + R+LSL C P + +P C
Sbjct: 593 GTVPEGEQ-----RSWFLAVGL-ADNTVRILSLDP--NNCLTPCSMQALPSPAESLCLVE 644
Query: 413 -------------------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTL 447
+G YL + L +G + LDP SG L D + L
Sbjct: 645 MGHTESTTSAGGVNEDAPAQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYL 704
Query: 448 GTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSL 507
G++P L + + V A S R + Y ++ + ++ + + ++E + +
Sbjct: 705 GSRPVKLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGI 764
Query: 508 ALATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ +T ++++ + + PL PR
Sbjct: 765 VAISTNTLRILALEKLGAVFNQVAFPLQYTPR 796
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 15/219 (6%)
Query: 1015 FEILHAHQLF-----PGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK---QGRIII 1066
+ +H +F E +S+ KF + + L + + P+ G I I
Sbjct: 879 LDAMHGQTMFNVPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDI 938
Query: 1067 FHYDD--GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
+ D L+ + EI ++C F G+LLA +R+++ +K LR E H
Sbjct: 939 YKIDPTCSSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIP 998
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I + ++ G + V D+ S+ ++Y+ E + D +P W+T+ +LD +
Sbjct: 999 YQI-VNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAI 1057
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLV 1222
A+ NL I + + T D D GT L GL+
Sbjct: 1058 ADKFGNLSIQRLPHSVTDDVDE---DPTGTKSLWDRGLL 1093
>gi|358060450|dbj|GAA93855.1| hypothetical protein E5Q_00501 [Mixia osmundae IAM 14324]
Length = 1153
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 214/501 (42%), Gaps = 65/501 (12%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G L+ + +E++E+ V K++ + + L L +G +FV S G+ + + +
Sbjct: 263 GDLYKVTVERQEE-----EVLALKIKYFDTVPVASSLCILRSGFLFVASEFGNHNVYQFD 317
Query: 149 RSPDENGTYVS--------------------------VMESFTNLAPIIDMVVVDLERQG 182
+ D+ S +++ +L PI+D V ++
Sbjct: 318 KLGDDGDEVSSADYPSFGMEREEPATFFKPRPLENLVLVDELDSLCPIVDAKVANVLGAD 377
Query: 183 QGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK--GIWALSIGSPKNLDNTLVLSF 240
Q++T G SL+++R+G+ +EE L G + G+W + S D+ +VLS
Sbjct: 378 APQIITACGRGHRSSLKMLRHGLEVEEMVSSGL-GFEPTGLWTTKLKSDDTYDSYIVLSA 436
Query: 241 VGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSS 300
T VLT+ G +E+ G +Q+T V +++QV P+ + + + V
Sbjct: 437 PAATIVLTI-GESIEQASNSGLVENQRTLCVQQVGDDSIVQVHPAGFLRVRADGSKEV-- 493
Query: 301 WE-PPNGKSISVVSCNKNQ-VLCATGCDVYYL--EVHGSEIKQLAHRALEYEVACLDISP 356
W P +++V N+ Q VL T D+ YL E+ G + L V + I
Sbjct: 494 WPLAPERVNLAVACANQRQIVLATTSGDIIYLRCELDGEITVFDDRKQLGVSVTSMSIGE 553
Query: 357 LSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG-------------GEII 403
LS + ++ VG D + R++SL E+ C E + EI+
Sbjct: 554 LSEDRLQTD-----YLCVGC-EDQTVRIISLQ--EQNCLETISIQALTALPSSICIAEIL 605
Query: 404 PRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTT 463
S+ T ++ + L +G + LDP SGRLTD + LGT+P L+ ++
Sbjct: 606 DSSVDKT--RPTTFVNIGLQNGVLLRTVLDPMSGRLTDTRTRFLGTRPVKLRRLAIGDSS 663
Query: 464 NVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI 523
V + S R V Y+ L F + ++H L AE P+ + T T T+ +I
Sbjct: 664 GVLSISSRTWVNYTHQGLLQFDPLISDPLDHATGLRAEVCPEGIIGVTGDTLRIFTLPKI 723
Query: 524 -QKLHIRTVPLGEAPRRIAYQ 543
K+ + ++PL PRR A+
Sbjct: 724 GTKVKMDSIPLSLTPRRTAFH 744
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 10/188 (5%)
Query: 1027 EYALSLISSKFGEDPNTYFVL-GTA---VVHPEENEPKQGRIIIFHYDDG--KLQQIAEK 1080
E A S+ ++F E P +F+L GTA V P G I + + L+ + +
Sbjct: 821 EAAFSVAVAQFAERPGKWFLLVGTAQDTTVSPRTC--THGFIRTYEITEAGRSLELLHKT 878
Query: 1081 EIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVG 1140
E+ S+ F G+ + + +RL+ + LR + + L+V+G I
Sbjct: 879 ELDDVPLSIAAFQGRAVVGVGRALRLYTMGKSRLLRKSENKSFPAAVVSLQVQGSRIYAS 938
Query: 1141 DLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAAT 1200
D S+ + YK + + D W+T ++D + + N+F+ + D +
Sbjct: 939 DAQDSVYFVAYKAADNRLLIFADDTQQRWITCNTVVDYDTVASGDKFGNVFVSRVDKLVS 998
Query: 1201 S--DEDRT 1206
DED+T
Sbjct: 999 EDVDEDQT 1006
>gi|195490209|ref|XP_002093045.1| GE20993 [Drosophila yakuba]
gi|194179146|gb|EDW92757.1| GE20993 [Drosophila yakuba]
Length = 1227
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 207/511 (40%), Gaps = 70/511 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE ++ + V E K++ + + L G +FV S G+
Sbjct: 301 FLLQTEQGDIFKITLETDDDV-----VSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ + NL APII V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +LR++R+G+ + E A +LPG +W + + D ++
Sbjct: 416 ANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I S R
Sbjct: 476 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI--RSDKR 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDI 354
V+ W+ P KSI+ + N+ QV+ +G ++ Y E+ + E+ + R+ + E+ C+ +
Sbjct: 533 VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ E ++ AVGL D + R+LSL C P + +P C
Sbjct: 593 GTVPEGEQ-----RSWFLAVGL-ADNTVRILSLDP--NNCLTPCSMQALPSPAESLCLVE 644
Query: 413 ------------------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLG 448
+G YL + L +G + LDP SG L D + LG
Sbjct: 645 MGHTESTTQGALDDDAPAPRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLG 704
Query: 449 TQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLA 508
++P L + V A S R + Y ++ + ++ + + ++E + +
Sbjct: 705 SRPVKLFRIKMQGAEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIV 764
Query: 509 LATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ +T ++++ + + PL PR
Sbjct: 765 AISTNTLRILALEKLGAVFNQVAFPLQYTPR 795
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 15/219 (6%)
Query: 1015 FEILHAHQLFP-----GEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK--QGRIIIF 1067
+ +H +F E +S+ KF + + L + + P+ QG I
Sbjct: 878 LDAMHGQTMFSVPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDI 937
Query: 1068 HYDD---GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
+ D L+ + EI ++C F G+LLA +R++++ +K LR E H
Sbjct: 938 YKIDPTCSSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIP 997
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I + ++ G + V D+ S+ ++Y+ E + D +P W+T+ +LD +
Sbjct: 998 YQI-VNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAI 1056
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLV 1222
A+ NL I + + T D D GT L GL+
Sbjct: 1057 ADKFGNLSIQRLPHSVTDDVDE---DPTGTKSLWDRGLL 1092
>gi|195996829|ref|XP_002108283.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
gi|190589059|gb|EDV29081.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
Length = 1208
Score = 119 bits (299), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 121/514 (23%), Positives = 210/514 (40%), Gaps = 59/514 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+ + + G +F L L E+ M V K++ I + + L G +F S G+
Sbjct: 301 FFIQNEQGDIFKLTLTVEDDM-----VSSIKLKYFDTIPVASSMIVLKTGFLFASSEFGN 355
Query: 142 SQLVKLNR--SPDENGTYVSVM-----ESF----------------TNLAPIIDMVVVDL 178
L ++ DE + S M E+F +L PI V DL
Sbjct: 356 HHLYQIAHLGDNDEETEFSSTMLLDEGETFYYSLRPLKNLVEVDEVDSLCPITGCQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +LRI+R+G+ + E A +LPG G+W + + D +V
Sbjct: 416 ANEDTPQLYVSCGRGPNSTLRILRHGLEVTEMAVSELPGNPNGVWTVKTSASAEYDAYIV 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T +C + +LQV + + + R
Sbjct: 476 VSFVNATLVLSI-GESVEEVSDSGFLGTTPTLHCCQIGDDALLQVYANG--IRHVRADKR 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEV--HGSEIKQLAHRALEYEVACLDI 354
V+ W+ P K IS + N QV A TG ++ Y E+ G + R EV C+ I
Sbjct: 533 VNEWKAPGKKIISKCAVNNRQVAIALTGGELVYFEMDLSGQLNEYTERREFSSEVICMSI 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEG 414
+ E + + AVGL D + R++SL + C +P+ + +P C
Sbjct: 593 GSVPVGE-----KRCRFLAVGL-ADHTVRMISLDPSD--CLQPMSMQALPTVPESLCIVA 644
Query: 415 H---------------CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
YL + L +G + LD +G ++D + LG++P L +
Sbjct: 645 MGSGDSSESEQGVLSTYYLNIGLQNGVLLRSVLDSVTGDMSDTRTRYLGSRPVRLFKVKI 704
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
++ V A S R + Y + ++ +++ +++ P+ + T
Sbjct: 705 QNSEAVLAISSRSWLGYMFQSVSRLTPLSYDALDYASGFSSDQCPEGVVSIAGDTLRILA 764
Query: 520 IDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVI 552
++++ + + T+ L PRR A + + V+
Sbjct: 765 LEKLGAVFNQMTINLKLTPRRFAIDQQNSNLVVV 798
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 1027 EYALSLISSKFGEDPN-TYFVLGTAV-VHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKG 1084
E ALS+ +F P+ T+ V+G A ++ + G + + +G+L+ + + ++
Sbjct: 879 EAALSVAICRFAYKPDETFVVVGVAKELNLNPSSSSGGLMNTYRMANGQLELVHKTVVEE 938
Query: 1085 ACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALF-LKVKGDFILVGDLM 1143
+M F G+LL +R+++ +K LR +C + N + + G ++VGD+
Sbjct: 939 VPRAMAAFQGRLLVGTGRILRVYDLGRKKLLR-KCENKNFPYRIVTISSMGSRVIVGDVQ 997
Query: 1144 RSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILD 1177
S+ ++Y+ E + D +P ++T+ LD
Sbjct: 998 ESVHFVKYRAKENRLVVFADDVSPRYVTATCFLD 1031
>gi|195169735|ref|XP_002025674.1| GL20829 [Drosophila persimilis]
gi|194109167|gb|EDW31210.1| GL20829 [Drosophila persimilis]
Length = 1225
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 208/512 (40%), Gaps = 71/512 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE ++ + V E K++ + + L G +FV S G+
Sbjct: 301 FLLQTEQGDIFKITLETDDDV-----VSEIKLKYFDTVPPASAMCVLKTGFLFVASEFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ + NL APII V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRTLKNLVLVDELPSFAPIITSQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +LR++R+G+ + E A +LPG +W + + D ++
Sbjct: 416 ANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I S R
Sbjct: 476 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI--RSDKR 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDI 354
V+ W+ P KSI+ + N+ QV+ +G ++ Y E+ + E+ + R+ + E+ C+ +
Sbjct: 533 VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ + E ++ AVGL D + R+LSL C P + +P C
Sbjct: 593 GTVPDGEQ-----RSWFLAVGL-ADNTVRILSLDP--NNCLTPCSMQALPSPAESLCLVE 644
Query: 413 -------------------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTL 447
+G YL + L +G + LDP SG L D + L
Sbjct: 645 MGHTESTTSAGALDDDAPPQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYL 704
Query: 448 GTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSL 507
G++P L + V A S R + Y ++ + ++ + + ++E + +
Sbjct: 705 GSRPVKLFRIKMQGAEAVLAMSSRSWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGI 764
Query: 508 ALATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ +T ++++ + + PL PR
Sbjct: 765 VAISTNTLRILALEKLGAVFNQVAFPLQFTPR 796
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 1023 LFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK--QGRIIIFHYDD---GKLQQI 1077
+F +S+ KF + + L + + P+ QG + + D L+ +
Sbjct: 889 MFKTRAIMSMAMVKFSVAADGRYYLAVGIARDLQLNPRISQGGCLDIYKIDPTCSSLEFM 948
Query: 1078 AEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDF 1136
EI ++C F G+LLA +R+++ +K LR E H I + ++ G
Sbjct: 949 HRTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQI-VNIQAMGHR 1007
Query: 1137 ILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKD 1196
+ V D+ S+ L+Y+ E + D +P W+T+ +LD + A+ NL I +
Sbjct: 1008 VYVSDVQESVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLP 1067
Query: 1197 SAATSDEDRTHLQEVGTVHLVGDGLV 1222
+ T D D GT L GL+
Sbjct: 1068 HSVTDDVDE---DPTGTKSLWDRGLL 1090
>gi|17508021|ref|NP_491953.1| Protein TEG-4 [Caenorhabditis elegans]
gi|351060889|emb|CCD68627.1| Protein TEG-4 [Caenorhabditis elegans]
Length = 1220
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 219/503 (43%), Gaps = 53/503 (10%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKL- 147
G +F + LE +E + V E K++ + L L +G +FV + G+ +L ++
Sbjct: 309 GDIFKVTLETDEDL-----VSEMKLKYFDTVPPANALCILKSGFLFVAAEFGNHELYQIA 363
Query: 148 NRSPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQL 186
+ ++ + S M +S +L+P+ D V+ D+ R+ Q+
Sbjct: 364 SLGEGDDDEFSSAMGFGENDAAFFEPHELKSLIPIDSMDSLSPLTDAVIGDIAREDAAQI 423
Query: 187 VTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTR 245
+ G SL+++RNG+ I E A DLPG +W + D+ +V+SFV T
Sbjct: 424 YSLVGRGARSSLKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYIVVSFVNATL 483
Query: 246 VLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPN 305
LT+ G VEE GF T C + +++Q+ I + R++ W+ P
Sbjct: 484 ALTI-GDTVEEASDSGFLPTTPTIGCAMIGDDSLVQIYSEGIRHIRADK--RINEWKAPP 540
Query: 306 GKSISVVSCNKNQVLCA-TGCDVYYLEVH-GSEIKQLAHRAL-EYEVACLDISPLSNEET 362
+ I + N+ QV A TG ++ Y E+ + + R L ++AC+ S +S E
Sbjct: 541 RRQIVKCAVNRRQVAVALTGGELVYFELDLNGTLNEFTERKLFNADIACMTFSEISEGEL 600
Query: 363 SSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILM--TCFE---- 413
+S + A+G D + R++SL + + PL + + P SIL+ T E
Sbjct: 601 NS-----RFLALGT-VDNAVRIISLDPNDMLM--PLSTQSLPCPPESILLIDTPNEDGKG 652
Query: 414 -GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRP 472
+L + L +G +F ++D +G + D + LGT+P L + + + S R
Sbjct: 653 VAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQCQGRSAILCTSSRS 712
Query: 473 TVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ-KLHIRTV 531
++Y + + ++ + + S + + + + ST +++ ++++
Sbjct: 713 WLLYHFQRRFHLTPLSYANLEYAASFCSNQCSEGIVAISASTLRIIAAEKLGVAFNVQSF 772
Query: 532 PLGEAPRRIAYQESSQTFGVITT 554
PRR+A S VI T
Sbjct: 773 EHKMTPRRVAVHPSMPCLIVIET 795
Score = 40.8 bits (94), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 3 SLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
SL+++RNG+ I E A DLPG +W + D+ +V+SFV T LT+
Sbjct: 434 SLKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYIVVSFVNATLALTI 487
>gi|440792421|gb|ELR13643.1| splicing factor 3b subunit 3, putative [Acanthamoeba castellanii
str. Neff]
Length = 1227
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 220/491 (44%), Gaps = 53/491 (10%)
Query: 91 LFMLLLEKE--EKMDGTFSVKEP-----KVELLGEISIPECLTYLDNGVVFVGSRLGDSQ 143
LF +LL+ E + T + +E K+ + + L G +FV + G+
Sbjct: 295 LFFILLQSEYGDIYKATLAWEEDNVSAIKINYFDTVPTSNAMCILKTGFLFVAAEFGNHF 354
Query: 144 LVK------------LNRSPDENGTY-------VSVMESFTNLAPIIDMVVVDLERQGQG 184
L + +++ DE T+ + ++ +LAPI+D V D+ ++
Sbjct: 355 LFQFQSIGDEEEESTMDQDEDEIPTFDPQPLKNLIAIDEIESLAPIMDFKVADMVKEETK 414
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGH 243
Q +T G SLR++++G+ + E A LPG I+ + D+ +++SF+
Sbjct: 415 QFLTLCGRGPRSSLRLLKHGLAVAEMADSPLPGNPNNIFTVRKNVADEYDSYIIVSFLNA 474
Query: 244 TRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEP 303
T VL++ G VEE + GF + T G V +++QV P+ I S R++ W
Sbjct: 475 TLVLSI-GDNVEEVKDAGFNENASTLNVGLVGDDSLVQVFPTGIRFI--RSDKRITEWPT 531
Query: 304 PNGKSISVVSCNKNQVLCA-TGCDVYY--LEVHGSEIKQLAHRALEYEVACLDISPLSNE 360
P ++I + N QV+ A TG ++ Y L++ GS + ++ + + ++AC+DI+P+
Sbjct: 532 PARRTIVRSAINNKQVVIALTGGELLYFELDITGSLV-EVGRKDMGRDIACIDIAPIPEG 590
Query: 361 ETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-------- 412
+A+ AVG + + + R+LSL E+V L + +P C
Sbjct: 591 RL-----RARFLAVGDYEN-TVRVLSLDP-EDVFSS-LAVQALPAPPESLCIVKMKGGTD 642
Query: 413 --EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSD 470
G +L + L +G + LD +G L+D + LG++P L R + A +
Sbjct: 643 SSAGTLFLNIGLTNGVLQRTVLDKVTGELSDTRTRFLGSRPVRLLKLRVGDQPAMLALTS 702
Query: 471 RPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIR 529
R + Y+ L + ++ +++ + +E P+ + + + + + + H
Sbjct: 703 RAWLCYNYQLHLHLTPLSYPALDYASNFCSERCPEGMVATIGNALRIISPERLGEVFHQE 762
Query: 530 TVPLGEAPRRI 540
+PL PR++
Sbjct: 763 LIPLRYTPRKM 773
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYF-VLGTA---VVHPEENEPKQGRI 1064
++D NT + + +L E A S + F + F V+GTA V++P + G I
Sbjct: 880 LLDVNTKQTIDVVELDNNEAAFSACTCVFHDRGGEIFLVVGTAKGLVLNPRSCD--AGYI 937
Query: 1065 IIFHYDDG--KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSH 1121
++ DG + + + +++G ++C F G+LL I +R+++ K LR E
Sbjct: 938 HVYRLLDGGKRFSLVHKTQVEGVPTAVCGFQGRLLVGIGKMLRIYDLGKRKLLRKCENKG 997
Query: 1122 FNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF 1181
F + I + +G+ I+VGDL S ++Y+ E + D NP W+T+ ++LD +
Sbjct: 998 FPHCIQ-SITTQGERIIVGDLAESFHFVKYRKAENQLNVYADDSNPRWLTASQMLDYDTM 1056
Query: 1182 LGAENSYNLFICQ 1194
GA+ N+FI +
Sbjct: 1057 AGADKFGNVFIVR 1069
>gi|374095609|gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]
Length = 1212
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 120/518 (23%), Positives = 223/518 (43%), Gaps = 62/518 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + L+ + V E +++ I + L L +G +F S G+
Sbjct: 297 FLLQTEYGDIFKVTLDHDND-----RVTELRIKYFDTIPVTASLCVLKSGFLFAASEFGN 351
Query: 142 SQLVK---LNRSPDENGTYVSVMES----------------------FTNLAPIIDMVVV 176
L + + PD + ++ME+ +L PI+DM ++
Sbjct: 352 HALYQFQAIGDEPDVESSSATLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPIMDMKII 411
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNT 235
+L + Q+ T G SLRI+R G+ I E A LPG+ +W + D
Sbjct: 412 NLFEEETPQIFTLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+V+SF T VL++ G VEE GF + + +++QV PS I +
Sbjct: 472 IVVSFANATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED-- 528
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLD 353
R++ W P ++I V N+ QV+ A +G ++ Y EV + ++ ++ + + +VACLD
Sbjct: 529 GRINEWRTPGKRTIVKVGSNRLQVVIALSGGEIIYFEVDMTGQLMEVEKQEMSGDVACLD 588
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMT 410
I+P+ +++ AVG + D R+LSL + C + L + + P S+L
Sbjct: 589 IAPVPEGRQ-----RSRFLAVGSY-DNCIRILSLDP--DDCMQVLSLQSVSSPPESLLFL 640
Query: 411 CFEGHC------------YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR 458
+ +L L +G +F +D +G+L+D + LG + L +
Sbjct: 641 EVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVI 700
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTF 517
+ S RP + Y + + ++ + S +++ + +A+A D+ F
Sbjct: 701 IRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRVF 760
Query: 518 GTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
TI+ + + + +PL PR+ Q + +I +
Sbjct: 761 -TIERLGETFNETAIPLRYTPRKFVLQPKRKLLVIIES 797
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 1062 GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LE 1118
G I I+ + +DGK L+ + + ++ ++C+F GKLLA + S +RL++ K LR E
Sbjct: 919 GYIHIYRFVEDGKSLELLHKTQVDDVPLALCQFQGKLLAGVGSVLRLYDLGKRKLLRKCE 978
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
F N I + D I VGD+ S +Y+ E + D P W+T+ +D
Sbjct: 979 NKLFPNTITSIHTYR-DRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDF 1037
Query: 1179 ELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
+ GA+ N++ + +D + +ED T
Sbjct: 1038 DTMAGADKFGNIYFVRLAQDVSDEIEEDPT 1067
>gi|195428692|ref|XP_002062402.1| GK16677 [Drosophila willistoni]
gi|194158487|gb|EDW73388.1| GK16677 [Drosophila willistoni]
Length = 1273
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 120/510 (23%), Positives = 212/510 (41%), Gaps = 67/510 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE ++ + V E K++ + + L G +FV S G+
Sbjct: 346 FLLQTEQGDIFKITLETDDDV-----VSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 400
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ + NL API+ V DL
Sbjct: 401 HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIVTSQVADL 460
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +LR++R+G+ + E A +LPG +W + D ++
Sbjct: 461 ANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRVDDEFDAYII 520
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I S R
Sbjct: 521 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI--RSDKR 577
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDI 354
V+ W+ P KSI+ + N+ QV+ +G ++ Y E+ + E+ + R+ + E+ C+ +
Sbjct: 578 VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMAL 637
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------------PS-LEEVC----- 394
+ + E ++ +VGL D + R+LSL PS E +C
Sbjct: 638 GTVPDGEQ-----RSWFLSVGL-ADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMG 691
Query: 395 -----KEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT 449
+G E +P +G YL + L +G + LDP SG L D + LG+
Sbjct: 692 HTESTTTAVGDEDVPAQRSGGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGS 751
Query: 450 QPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLAL 509
+P L + + V A S R + Y ++ + ++ + + ++E + +
Sbjct: 752 RPVKLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVA 811
Query: 510 ATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ +T ++++ + + PL PR
Sbjct: 812 ISTNTLRILALEKLGAVFNQVAFPLQYTPR 841
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 15/219 (6%)
Query: 1015 FEILHAHQLF-----PGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK---QGRIII 1066
+ +H +F E +S+ KF + + L + + P+ G I I
Sbjct: 924 LDAMHGQTMFNVPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDI 983
Query: 1067 FHYDD--GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
+ D L+ + EI+ ++C F G+LLA +R+++ +K LR E H
Sbjct: 984 YKIDPTCSSLEFLHRTEIEEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIP 1043
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I + ++ G + V D+ S+ ++Y+ E + D +P W+T+ +LD +
Sbjct: 1044 YQI-VNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAI 1102
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLV 1222
A+ NL I + + T D D GT L GL+
Sbjct: 1103 ADKFGNLSIQRLPHSVTDDVDE---DPTGTKSLWDRGLL 1138
>gi|170083859|ref|XP_001873153.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650705|gb|EDR14945.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1213
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 130/541 (24%), Positives = 224/541 (41%), Gaps = 71/541 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G L+ + +E E++ VK K++ + + L L +G +FV S G+
Sbjct: 307 FLLQSEDGDLYKVTIEHEDE-----EVKSLKIKYFDTVPVASNLCILKSGFLFVASEFGN 361
Query: 142 SQLVKLNRSPDENG-------TY---------VSVMESFTNLAPIIDMVVVD-------- 177
L + + D++ +Y V + +F L P+ ++VV D
Sbjct: 362 HYLYQFQKLGDDDDEPEFSSTSYPSFGMADPSVPLPHAFFRLHPLDNLVVADELESLDPI 421
Query: 178 --------LERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGS 228
L Q+ G + R +R+G+ +EE DLPGI +W
Sbjct: 422 LDSKVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEESVSSDLPGIPNAVWTTKRTE 481
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
D+ ++LSFV T VL++ G +EE + GF S T + +LQV P
Sbjct: 482 DDPFDSYIILSFVNGTLVLSI-GETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPHG-- 538
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRAL 345
+ + RV+ W P GK+I + NK QV+ A VY+ L++ G + +A+
Sbjct: 539 IRHVLADRRVNEWRVPQGKTIVSATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAM 598
Query: 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEI 402
V L I + + AVG D + R++SL +LE + + L
Sbjct: 599 GSTVLALSIGDVPEGRQ-----RTPYLAVGC-EDQTVRIISLDPETTLETISLQALTAP- 651
Query: 403 IPRSILMTCF--------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVL 454
P +I + + ++ + L +G + LDP +G+LTD + LGT+P L
Sbjct: 652 -PSAICIADMLDASINKSQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKL 710
Query: 455 KTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST 514
+ + A S R + Y+ + + F+ + +++ S +AE P+ L S
Sbjct: 711 VRVQIQRNPGILALSSRSWLNYTHQNLMHFTPLIYDNLDYAWSFSAELSPEGLIGIAGSV 770
Query: 515 FTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSAST 573
+ ++ KL ++PL PR+ + F +I E D T +AST
Sbjct: 771 LRIFQVPKLGTKLKQDSIPLSYTPRKFITHPGNNYFYLI-------EGDHRTLGEEAAST 823
Query: 574 Q 574
+
Sbjct: 824 K 824
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 14/190 (7%)
Query: 1027 EYALSL----ISSKFGEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAE 1079
E A SL S++ GE + V+GTA +V P R F + L+ +
Sbjct: 881 EAAFSLAIVPFSARNGE---LHLVVGTAADTIVSPRSCTSGYLRTYKFTNEGAGLEFQHK 937
Query: 1080 KEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFIL 1138
E+ ++ F G+L+A + +R+++ +K LR +E F++ I + L +G I+
Sbjct: 938 TEVDDVPLALLAFQGRLVAGVGKALRIYDIGKKKLLRKVENKTFSSAI-VTLSTQGSRII 996
Query: 1139 VGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSA 1198
VGD+ S+ YK E + D P W+T+ ++D + + N+F+ + D
Sbjct: 997 VGDMQESIQFAVYKPPENRLLVFADDSQPRWITASSMVDYNTIVAGDRFGNIFVNRLDPK 1056
Query: 1199 ATS--DEDRT 1206
+ D+D T
Sbjct: 1057 VSEQVDDDPT 1066
>gi|356536504|ref|XP_003536777.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
Length = 1214
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/548 (23%), Positives = 221/548 (40%), Gaps = 60/548 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE V E K++ I + + L +G +F S G+
Sbjct: 297 FLLQTEYGDIFKVTLEHNND-----RVSELKIKYFDTIPVTASMCVLKSGFLFAASEFGN 351
Query: 142 SQLVKLNRSPDEN------GTYVSVMESFT-------------------NLAPIIDMVVV 176
L + D++ T + E F +L PI+DM V
Sbjct: 352 HALYQFKSIGDDDDVEASSATLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPIMDMKVS 411
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNT 235
+L + Q+ T G SLRI+R G+ + E A LPGI +W + D
Sbjct: 412 NLFEEETPQIYTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPSAVWTVKKNVIDEFDAY 471
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+V+SF T VL++ G VEE GF + + +++QV P+ I +
Sbjct: 472 IVVSFTNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIRED-- 528
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH-GSEIKQLAHRALEYEVACLD 353
R++ W P +SIS V N QV+ A +G ++ Y E+ ++ ++ + +VACLD
Sbjct: 529 GRINEWRTPGKRSISKVGSNTLQVVIALSGGELIYFEMDVTGQLMEVEKHEMSGDVACLD 588
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMT 410
I+P+ +++ AVG + D + R+LSL + C + L + + P S+L
Sbjct: 589 IAPVPEGRQ-----RSRFLAVGSY-DKTIRILSLDP--DDCMQALSVQSVSSAPESLLFL 640
Query: 411 CFEGHC------------YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR 458
+ +L L +G MF +D +G+L+D + LG + L
Sbjct: 641 EVQASVGGEDGADHPASLFLNAGLQNGVMFRTVVDMVTGQLSDSRSRFLGLRAPKLFPII 700
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFG 518
+ S RP + Y + + ++ + + S +++ + +
Sbjct: 701 VRGKRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCVEGVVAVAGEALRIF 760
Query: 519 TIDEIQKLHIRTV-PLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQN 577
TI+ + + TV PL PR+ Q + +I + A+ R AQ
Sbjct: 761 TIERLGETFNETVIPLRYTPRKFVLQPKRKLLVMIESDQGALTAEEREAARKECFEAAQA 820
Query: 578 TTSSTISS 585
+ T S+
Sbjct: 821 GENGTGSA 828
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLGTAVVHPEENEPKQ----GR 1063
++D T +L E A S+ + F + + T +GTA + PK+ G
Sbjct: 865 VLDPRTSNTTCLLELQENEAAFSICTVNFHDKEYGTLLAVGTA--KGLQFLPKRTVTAGF 922
Query: 1064 IIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECS 1120
I I+ + +DG+ L+ + + +++G ++C+F G+LLA I +RL++ ++ LR E
Sbjct: 923 IHIYRFVEDGRSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK 982
Query: 1121 HFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDEL 1180
F N I + + D I VGD+ S +Y+ E + D P W+T+ +D +
Sbjct: 983 LFPNTI-ISIHAYRDRIYVGDVQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFDT 1041
Query: 1181 FLGAENSYNLFICQ--KDSAATSDEDRT 1206
G + N++ + +D + +ED T
Sbjct: 1042 MAGTDKFGNIYFVRLPQDVSDEIEEDPT 1069
>gi|414883930|tpg|DAA59944.1| TPA: hypothetical protein ZEAMMB73_987949 [Zea mays]
Length = 1355
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 210/500 (42%), Gaps = 81/500 (16%)
Query: 125 LTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQG 184
L ++ N ++ +GD + KL + + + N+API+D+ + D + Q
Sbjct: 443 LFWMKNRMIIGFVEMGDGMIFKLGHRRLLHKSTIQ------NVAPILDLAIADYHGEKQD 496
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACID--LPGIKGIWALSIGSPKNLDNTLVLSFVG 242
Q+ C G EGSLR++RNG+ ++ + G+ G+W L + + + LVLSFV
Sbjct: 497 QMFACCGMSPEGSLRVLRNGVNVDRLLKTEAIYQGVTGLWTLRMKATDAYHSFLVLSFVE 556
Query: 243 HTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVT--------------PSAAI 288
TR+L++ + + ++ GF D T CG V ++Q+ P A
Sbjct: 557 ETRILSVGLSFNDISDAVGFQPDVCTLACGLVADNLLVQIYSKGVKVCLPTVYAHPEGAP 616
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQVLCATG--CDVYYLEVHGS-----EIKQLA 341
L S + W P +ISV + N V+ AT C +Y L V S E+
Sbjct: 617 LTS----PICTDWYP--AITISVGAVGHNIVVVATSNPCCLYVLGVRSSSSYQYELYATH 670
Query: 342 HRALEYEVACLDI------------SPLSNEETSSEPAK----AQLAAVG---------- 375
H L+YEV+C+ I S ++ P + A +G
Sbjct: 671 HVQLQYEVSCISIPQEDCIHDNVSFSCGEGDDICKNPPPKVNVCKFAVIGTHRPSVEIIS 730
Query: 376 LWTDISARLLSLP--SLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYF--- 430
L + R+L++ S+ P+ G IP ++ E Y+L L +G + F
Sbjct: 731 LEPGEALRVLTIGTVSVNNALGAPMSG-CIPENVRFVAAE-RFYILAGLRNGMLLRFESE 788
Query: 431 SLDPASGRLTDKKKVT-------------LGTQPTVLKTFRSLSTTNVFACSDRPTVIYS 477
+ D G L + +G P +L + ++ SDRP ++++
Sbjct: 789 TRDYLPGFLYKDSSIPSVNTFLQLISIRRIGITPVLLVPIHDSANADIIVLSDRPWLLHA 848
Query: 478 SNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAP 537
+ H L +S+++ +H+ +++ P+ L +S + ++L+ + +G P
Sbjct: 849 ARHSLAYSSISFLSASHVTPVSSVDCPNGLLFVAESCLHLVELVHGKRLNAQKFSIGGTP 908
Query: 538 RRIAYQESSQTFGVITTRID 557
R++ Y S+T V+ T ++
Sbjct: 909 RKVLYHNESRTLLVLRTGLN 928
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEEHACID--LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLR++RNG+ ++ + G+ G+W L + + + LVLSFV TR+L++
Sbjct: 507 EGSLRVLRNGVNVDRLLKTEAIYQGVTGLWTLRMKATDAYHSFLVLSFVEETRILSV 563
>gi|170041368|ref|XP_001848437.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
gi|167864946|gb|EDS28329.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
Length = 1215
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 126/567 (22%), Positives = 227/567 (40%), Gaps = 72/567 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G +F + LE ++ + V E K++ + + L G +FV G+
Sbjct: 301 FLVQTEQGDIFKVTLETDDDV-----VAEIKLKYFDTVPPATAMCVLKTGFLFVACDFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ NL API+ V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLKNLVMVDEIHSFAPILGCQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G S+R++R+G+ + E A +LPG +W + + D ++
Sbjct: 416 ANEDTPQLYLACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I + R
Sbjct: 476 VSFVNATLVLSI-GDTVEEVTDSGFLGTTPTLCCSALGDDALVQVYPDGIRHIRADK--R 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDI 354
V+ W+ P K+I + N QV+ A +G ++ Y E+ G + + + +V C+ +
Sbjct: 533 VNEWKAPGKKTIIKCAVNSRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSDVMCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ E +A AVGL D + R++SL + C P + +P + C
Sbjct: 593 GSVPAGEQ-----RAWFLAVGL-ADNTVRIISLDPAD--CLSPRSMQALPSAAESLCIVE 644
Query: 413 --------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR 458
G YL + L +G + LDP SG L D + LG++P L +
Sbjct: 645 MGTGESNEEGTVSTAGCFYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIK 704
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFG 518
+ V A S R + Y ++ + ++ + + ++E + + + +T
Sbjct: 705 MQGSEAVLAMSSRTWLSYYYQNRFHLTPLSYETLEYASGFSSEQCAEGIVAISTNTLRIL 764
Query: 519 TIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQN 577
++++ + + T PL P+R T ++ I E D + + + + +N
Sbjct: 765 ALEKLGAVFNQITFPLEYTPKRFLIHNE-------TGKLIISETDHN-----AYTEETKN 812
Query: 578 TTSSTISSLSYIKPGSTKQSTANQPAD 604
++ G +Q AN+ AD
Sbjct: 813 IRKKQMADEMREAAGEDEQELANEMAD 839
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Query: 1022 QLFPGEYALSLISSKFGEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYD--DGKLQQ 1076
QL E +S+ +F D Y V G A ++P+ G I ++ YD +L+
Sbjct: 880 QLAQNEAVMSMALVRFTVDQKWYVVAGVAKDLALNPKIT--NGGFIDVYKYDFHTHQLEH 937
Query: 1077 IAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGD 1135
EI A ++C F G++L I +R+++ +K LR E H N I + ++ G
Sbjct: 938 YHRTEIDDAPGAICSFQGRVLVGIGKVLRIYDLGKKKLLRKCENKHIPNQI-VNIQAMGS 996
Query: 1136 FILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQK 1195
+ V D+ S+ ++YK E + D +P W+T+ +LD + A+ N+ + +
Sbjct: 997 RVFVSDVQESIYCVKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADKFGNVSVLRL 1056
Query: 1196 DSAATSDED 1204
+ + D D
Sbjct: 1057 PHSVSDDVD 1065
>gi|157131296|ref|XP_001662180.1| spliceosomal protein sap [Aedes aegypti]
gi|108881836|gb|EAT46061.1| AAEL002709-PA [Aedes aegypti]
Length = 1215
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/567 (22%), Positives = 229/567 (40%), Gaps = 72/567 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G +F + LE ++ + V E K++ + + L G +FV G+
Sbjct: 301 FLVQTEQGDIFKVTLETDDDV-----VSEIKLKYFDTVPPATAMCVLKTGFLFVACEFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ NL API+ V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRQLKNLVMVDEIHSYAPILGCQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G S+R++R+G+ + E A +LPG +W + + D ++
Sbjct: 416 ANEDTPQLYLACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDEEFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I + R
Sbjct: 476 VSFVNATLVLSI-GDTVEEVTDSGFLGTTPTLSCSALGDDALVQVYPDGIRHIRADK--R 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDI 354
V+ W+ P K+I+ + N+ QV+ A +G ++ Y E+ G + + + +V C+ +
Sbjct: 533 VNEWKAPGKKTITKCAVNQRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSDVMCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ E ++ AVGL D + R++SL + C P + +P + C
Sbjct: 593 GSVPAGEQ-----RSWFLAVGL-ADNTVRVISLDPSD--CLSPRSMQALPSAAESLCIVE 644
Query: 413 --------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR 458
G YL + L +G + LDP SG L D + LG++P L +
Sbjct: 645 MGTGDTNEEGVASSAGCIYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIK 704
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFG 518
+ V A S R + Y ++ + ++ + + ++E + + + +T
Sbjct: 705 MQGSEAVLAMSSRTWLSYYFQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRIL 764
Query: 519 TIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQN 577
++++ + + T PL P+R T ++ I E D + + + + +N
Sbjct: 765 ALEKLGAVFNQITFPLEYTPKRFLIHNE-------TGKLVISETDHN-----AYTEETKN 812
Query: 578 TTSSTISSLSYIKPGSTKQSTANQPAD 604
++ G +Q AN+ AD
Sbjct: 813 IRKKQMADEMREAAGEDEQELANEMAD 839
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 1022 QLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK---QGRIIIFHYD--DGKLQQ 1076
QL E LS+ +F D Y V G V + PK G I ++ YD +L+
Sbjct: 880 QLAQNEAVLSMALVRFAVDQKWYVVAG--VAKDLQMNPKIANGGFIDVYKYDVHTHQLEH 937
Query: 1077 IAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGD 1135
EI A ++ F G++L + +R+++ +K LR E H N I + ++ G
Sbjct: 938 YHRTEIDDAPGAIAGFQGRVLVGVGRVLRIYDLGKKKLLRKCENKHIPNQI-VNIQAMGS 996
Query: 1136 FILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQK 1195
+ V D+ S+ ++YK E + D +P W+T+ +LD + A+ N+ I +
Sbjct: 997 RVFVSDVQESIYCIKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADKFGNIAILRL 1056
Query: 1196 DSAATSDED 1204
+ + D D
Sbjct: 1057 PHSVSDDVD 1065
>gi|195126264|ref|XP_002007593.1| GI12293 [Drosophila mojavensis]
gi|193919202|gb|EDW18069.1| GI12293 [Drosophila mojavensis]
Length = 1227
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 206/511 (40%), Gaps = 70/511 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE ++ + V E K++ + + L G +FV S G+
Sbjct: 301 FLLQTEQGDIFKITLETDDDV-----VSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ + NL APII V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +LR++R+G+ + E A +LPG +W + D ++
Sbjct: 416 ANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I S R
Sbjct: 476 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI--RSDKR 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDI 354
V+ W+ P KSI+ + N+ QV+ +G ++ Y E+ + E+ + R+ + E+ C+ +
Sbjct: 533 VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ E ++ AVGL D + R+LSL C P + +P C
Sbjct: 593 GTVPEGEQ-----RSWFLAVGL-ADNTVRILSLDP--NNCLSPCSMQALPSPAESLCLVE 644
Query: 413 ------------------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLG 448
+G YL + L +G + LDP SG L D + LG
Sbjct: 645 MGHTESTTNAGADDDVPAQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLG 704
Query: 449 TQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLA 508
++P L + V A S R + Y ++ + ++ + + ++E + +
Sbjct: 705 SRPVKLFRIKMQGAEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIV 764
Query: 509 LATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ +T ++++ + + PL PR
Sbjct: 765 AISTNTLRILALEKLGAVFNQVAFPLQFTPR 795
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 15/219 (6%)
Query: 1015 FEILHAHQLFP-----GEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK--QGRIIIF 1067
+ +H +F E +S+ KF + + L + + P+ QG I
Sbjct: 878 LDAMHGQTMFTVPLTQNEAIMSMAMLKFSVAADGRYYLAVGIAKDLQLNPRISQGGCIDI 937
Query: 1068 HYDD---GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
+ D L+ + EI+ ++C F G+LLA +R+++ +K LR E H
Sbjct: 938 YKIDPTCSALEFLHRTEIEEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIP 997
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I + ++ G + V D+ S+ ++Y+ E + D +P W+T+ +LD +
Sbjct: 998 YQI-VNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAI 1056
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLV 1222
A+ NL I + + T D D GT L GL+
Sbjct: 1057 ADKFGNLSIQRLPHSVTDDVDE---DPTGTKSLWDRGLL 1092
>gi|403370717|gb|EJY85226.1| Spliceosomal protein sap, putative [Oxytricha trifallax]
Length = 1203
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 212/462 (45%), Gaps = 35/462 (7%)
Query: 158 VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG 217
+ ++ F NLA I DM V DL +G Q+ SG +G LR++R+G+ I E A +P
Sbjct: 395 LQAVDEFPNLASINDMKVEDLTGEGNPQIYLASGRGAQGCLRVLRHGLTIIEKAVTAMPQ 454
Query: 218 IKGIWALSIGSPKN--LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVD 275
K + +++ D +++SF T VL++ +V E + GF +++T + G ++
Sbjct: 455 -KPLNVITVKGKTTDVFDKYMIVSFQQQTLVLSIGQEKVSEVKDSGFVDNERTLHVGILE 513
Query: 276 PRTVLQVTPSAAILISTESKARV-SSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVH- 333
+ +QVTP + I + + + R + W+ GK + S + + G + Y E+
Sbjct: 514 DNSYIQVTPKSIIHVKGDQQNRKRAKWDSGQGKIVKACSNQRQVAVSIEGGQIVYFELDE 573
Query: 334 -GSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEE 392
+ ++ R + EVAC+DI+ + + + AVG + D + +++SL E
Sbjct: 574 MSGTLNEVESRFYDSEVACIDIA-----DVPEGRQRCRFLAVG-YADKTVKIMSLDP--E 625
Query: 393 VCKEPLGGEII---PRSILMTCF--------EGHCYLLVALGDGSMFYFSLDPASGRLTD 441
C + + + + P S+ + F + +L V L +G + +D +G L+D
Sbjct: 626 SCLQRISMQALPAHPESVALISFQRDEVAQQQQQLFLHVGLVNGVLLRTLVDNVTGVLSD 685
Query: 442 KKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYS--SNHKLVFSNVNLRQVNHMCSLN 499
+ LGT L R +T + A ++P + Y+ S +K+ + ++ + S
Sbjct: 686 SRTRFLGTNSISLAKVRQGNTNALVALCNKPWLCYTHMSTNKVNITPLSYEMLEVASSFC 745
Query: 500 AESYPDSLALA-TDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
+E PD +A + +T T++ + + + +PL P +I Q +T ++ D
Sbjct: 746 SEKCPDGGIVAISGNTLRIITVERLGENFTHKVMPLRYTPTKI--QIHRETNYLVILEKD 803
Query: 558 IQEADGSTPVRP----SASTQAQNTTSSTISSLSYIKPGSTK 595
S +R + +T+ +N + S +SY + G K
Sbjct: 804 HNSYSYSERLRMKEEIAKNTEDENYLALDESRISYPRAGQNK 845
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 107/231 (46%), Gaps = 24/231 (10%)
Query: 977 SSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSK 1036
S +SY + G K ++ + D + + L +I+ E++ +H I++
Sbjct: 834 SRISYPRAGQNKFASCIRIVDPYL---LQTLELIEFENNEVVFSH----------FIATT 880
Query: 1037 FGEDPNTYFVLGTAV-VHPEENEPKQGRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFN 1093
G T+ +LGTA+ V + G I + + ++G+ LQ + + + E+
Sbjct: 881 LGNPGETHLILGTALNVTFQPRSCSVGFIKTYKFVNNGQSLQLMHSTPCEDIPMAFNEYK 940
Query: 1094 GKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
G+L+A + +R++E +K LR +E +F I + ++V I GDL S+ +L+YK
Sbjct: 941 GRLIAGVGPILRIYELGQKKLLRKVENKNFQAPI-IQIQVDEGRIYAGDLQESVHVLKYK 999
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI------CQKDS 1197
+ S D W+TS +LD + G + N+FI C+ D+
Sbjct: 1000 PEDVQLYIFSDDILNRWLTSFCLLDHDTIAGVDKFENVFINRLPVGCEDDA 1050
>gi|195012560|ref|XP_001983703.1| GH16029 [Drosophila grimshawi]
gi|193897185|gb|EDV96051.1| GH16029 [Drosophila grimshawi]
Length = 1228
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 207/512 (40%), Gaps = 71/512 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE ++ + V E K++ + + L G +FV S G+
Sbjct: 301 FLLQTEQGDIFKITLETDDDV-----VSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ + NL APII V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +LR++R+G+ + E A +LPG +W + D ++
Sbjct: 416 ANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I S R
Sbjct: 476 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI--RSDKR 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDI 354
V+ W+ P KSI+ + N+ QV+ +G ++ Y E+ + E+ + R+ + E+ C+ +
Sbjct: 533 VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ E ++ AVGL D + R+LSL C P + +P C
Sbjct: 593 GTVPEGEQ-----RSWFLAVGL-ADNTVRILSLDP--NNCLSPCSMQALPSPAESLCLVE 644
Query: 413 -------------------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTL 447
+G YL + L +G + LDP SG L D + L
Sbjct: 645 MGHTESTTNASGADEDVPAQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYL 704
Query: 448 GTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSL 507
G++P L + + V A S R + Y ++ + ++ + + ++E + +
Sbjct: 705 GSRPVKLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGI 764
Query: 508 ALATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ +T ++++ + + PL PR
Sbjct: 765 VAISTNTLRILALEKLGAVFNQVAFPLQFTPR 796
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 8/198 (4%)
Query: 1029 ALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDD---GKLQQIAEKEIKGA 1085
A++++ D Y +G A QG I + D L+ + EI+
Sbjct: 900 AMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDVYKIDPTCSALEFLHRTEIEEI 959
Query: 1086 CYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMR 1144
++C F G+LLA +R+++ +K LR E H I + ++ G + V D+
Sbjct: 960 PGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQI-VNIQAMGHRVYVSDVQE 1018
Query: 1145 SLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDED 1204
S+ ++Y+ E + D +P W+T+ +LD + A+ NL I + + T D D
Sbjct: 1019 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1078
Query: 1205 RTHLQEVGTVHLVGDGLV 1222
GT L GL+
Sbjct: 1079 E---DPTGTKSLWDRGLL 1093
>gi|328853180|gb|EGG02320.1| hypothetical protein MELLADRAFT_44871 [Melampsora larici-populina
98AG31]
Length = 1210
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/502 (24%), Positives = 222/502 (44%), Gaps = 57/502 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G LF + ++ E++ V+ K++ + + LT L +G +FV + +G+
Sbjct: 309 FLVQTEEGDLFKVTIDHEDE-----EVQALKIKYFDTVPVSSSLTILKSGFLFVAAEMGN 363
Query: 142 S---QLVKLNRSPDE----------NGTY----------------VSVMESFTNLAPIID 172
Q KL DE NG + + + +LAPIID
Sbjct: 364 HYLYQFEKLGDDDDETEFSSEQYPDNGCSDEPLPKAFFKPRPLQNLVLSDELESLAPIID 423
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+L Q++T G SLRI+R+G+ + E DLPG +W +
Sbjct: 424 AKAANLLNTDSPQILTSCGRGSRSSLRILRHGLDVSEIVTSDLPGPPTNVWTTKLNDDDL 483
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++L F+ T VL++ G + E GF ++ T +D +LQ+ P+ I
Sbjct: 484 FDRYIILGFLNATLVLSI-GETIVEVSDTGFLTNSPTISIQQLDKNGLLQIHPTGIRHIH 542
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVA 350
V+ W+ P G+ I V + N+ QV+ +G ++ Y E+ +++ + E +
Sbjct: 543 L--NGGVTEWKVPAGRKIVVSTSNQRQVVVGLSGGELIYFEL---DLEGQLNEYQEQKEM 597
Query: 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS---LEEVCKEPLGGEIIPRSI 407
I+ LS E + A+GL +++ +++SL LE + + L +P SI
Sbjct: 598 GSTITTLSLSEVPKGRQRTPFLAIGL-ENLTVQIISLDPNSVLETISLQALTS--VPSSI 654
Query: 408 LMTCF--------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
+ ++ + L +G + LD +G+LTD + LG++P L +
Sbjct: 655 CIAELLDSSIDKNNETLFVNIGLSNGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLLRVKV 714
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
S T+V A S R + Y+ + L F+ + ++++ S +AE P+ L S+ T
Sbjct: 715 DSKTSVIALSSRTWLNYTYQNMLQFNPLIYDSIDNVHSFSAELCPEGLIGIVGSSLRIFT 774
Query: 520 IDEIQ-KLHIRTVPLGEAPRRI 540
I ++ K+ ++PL PR++
Sbjct: 775 IPKLGIKVKQDSMPLSYTPRKM 796
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Query: 1045 FVLGTA---VVHPEENEPKQGRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLAS 1099
V+GTA V P + G + +F + D+GK L+ + + E+ ++ F G+L A
Sbjct: 898 LVVGTAKDAFVQPRTC--RNGYLSVFKFTDNGKGLELLHKTEVDDIPTAIIGFQGRLAAG 955
Query: 1100 INSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSF 1158
I +R+F+ +K LR +E F+ I+ L +G +LVGD S++ YK E
Sbjct: 956 IGKALRIFDLGKKKLLRKVENKTFSAAIS-SLSTQGPRLLVGDAQDSISYAVYKPAENRL 1014
Query: 1159 EEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVG 1218
+ D +P W T ++D + G + N+++ + SDE G +H G
Sbjct: 1015 LVFADDISPRWTTCATMVDYDTCAGGDRFGNVWV-NRIPKTVSDEVDDDPTGAGIMHEKG 1073
>gi|195376606|ref|XP_002047087.1| GJ13230 [Drosophila virilis]
gi|194154245|gb|EDW69429.1| GJ13230 [Drosophila virilis]
Length = 1229
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 119/513 (23%), Positives = 206/513 (40%), Gaps = 72/513 (14%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE ++ + V E K++ + + L G +FV S G+
Sbjct: 301 FLLQTEQGDIFKITLETDDDV-----VSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ + NL APII V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G +LR++R+G+ + E A +LPG +W + D ++
Sbjct: 416 ANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF T C + ++QV P I S R
Sbjct: 476 VSFVNATLVLSI-GETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI--RSDKR 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDI 354
V+ W+ P KSI+ + N+ QV+ +G ++ Y E+ + E+ + R+ + E+ C+ +
Sbjct: 533 VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ E ++ AVGL D + R+LSL C P + +P C
Sbjct: 593 GTVPEGEQ-----RSWFLAVGL-ADNTVRILSLDP--NNCLSPCSMQALPSPAESLCLVE 644
Query: 413 --------------------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVT 446
+G YL + L +G + LDP SG L D +
Sbjct: 645 MGHTESTTNAGGADDDVPAQRSGGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRY 704
Query: 447 LGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS 506
LG++P L + V A S R + Y ++ + ++ + + ++E +
Sbjct: 705 LGSRPVKLFRIKMQGAEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEG 764
Query: 507 LALATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ + +T ++++ + + PL PR
Sbjct: 765 IVAISTNTLRILALEKLGAVFNQVAFPLQFTPR 797
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 15/219 (6%)
Query: 1015 FEILHAHQLFP-----GEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK--QGRIIIF 1067
+ +H +F E +S+ KF + + L + + P+ QG I
Sbjct: 880 LDAMHGQTMFSVPLTQNEAIMSMTLLKFSVAADGRYYLAVGIAKDLQLNPRISQGGCIDI 939
Query: 1068 HYDD---GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
+ D L+ + EI ++C F G+LLA +R+++ +K LR E H
Sbjct: 940 YKIDPTCSALEFLHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIP 999
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I + ++ G + V D+ S+ ++Y+ E + D +P W+T+ +LD +
Sbjct: 1000 YQI-VNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAI 1058
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLV 1222
A+ NL I + + T D D GT L GL+
Sbjct: 1059 ADKFGNLSIQRLPHSVTDDVDE---DPTGTKSLWDRGLL 1094
>gi|297739782|emb|CBI29964.3| unnamed protein product [Vitis vinifera]
Length = 1363
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 134/541 (24%), Positives = 220/541 (40%), Gaps = 93/541 (17%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVEL---LGEISIPECLTYLDNGVVFVGSRLGDSQLV 145
G LFM+ + +F PKV L L + L + G + +GD ++
Sbjct: 396 GELFMIEI--------SFDSDGPKVNLSDCLYRGLSCKALLWFAGGFLAALVEMGDGMVL 447
Query: 146 KLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGI 205
KL E G V N+API+DM VVD + Q+ C G EGSLRIIR+GI
Sbjct: 448 KL-----EQGRLV-YRSPIQNIAPILDMSVVDCHDEEHDQMFACCGVTPEGSLRIIRSGI 501
Query: 206 GIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFT 263
+E+ GI G W + + + + LVLSFV TRVL++ + + T+ GF
Sbjct: 502 SVEKLLRTAPIYQGITGTWTVKMKVIDSYHSFLVLSFVEETRVLSVGLSFTDVTDSVGFQ 561
Query: 264 SDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR----------VSSWEPPNGKSISVVS 313
D T CG VD ++Q+ + L + A +SW P N SIS+ +
Sbjct: 562 PDVSTLACGVVDDGLLVQIHKNGVKLCLPTTVAHPEGIPLASPICTSWFPEN-ISISLGA 620
Query: 314 CNKNQVLCATG--CDVYYLEV-----HGSEIKQLAHRALEYEVACLDI---------SPL 357
N ++ AT C ++ L V + EI ++ H L+ EV+C+ I S
Sbjct: 621 VGYNLIVVATSSPCFLFILGVRSVSAYQYEIYEMQHVRLQNEVSCISIPHKHFDKKPSTF 680
Query: 358 SNEETSSEPAKAQLAAVGLWTDISARLLSL----PSLEEVCKEP-------LGGEIIPRS 406
+ + A A L V + R+ + PS+E + P G I +
Sbjct: 681 LSNLVDNSSAAALLIGVNI-----GRIFVIGTHKPSVEILSFLPDEGLRILASGAISLTN 735
Query: 407 ILMTCFEG------------HCYLLVALGDGSMFYFSLDPASGRLTDKKKVT-------- 446
L T G Y+L L +G + F L AS + +
Sbjct: 736 TLGTAVSGCVPQDARLVLVDRFYVLSGLRNGMLLRFELPAASMVFSSELSSHSPSTNINS 795
Query: 447 -----------LGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHM 495
+G P L ++ A SDRP ++ S+ H L +++++ + H+
Sbjct: 796 PVNLQLIAIRRIGITPVFLVPLSDSLEADIIALSDRPWLLQSARHSLSYTSISFQPSTHV 855
Query: 496 CSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
+ + P + +++ + ++L+++ LG PR++ Y S+ V+ T
Sbjct: 856 TPVCSMECPMGILFVAENSLHLVEMVHSKRLNVQKFYLGGTPRKVLYHSESRLLLVMRTE 915
Query: 556 I 556
+
Sbjct: 916 L 916
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLRIIR+GI +E+ GI G W + + + + LVLSFV TRVL++
Sbjct: 491 EGSLRIIRSGISVEKLLRTAPIYQGITGTWTVKMKVIDSYHSFLVLSFVEETRVLSV 547
>gi|168064351|ref|XP_001784126.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664326|gb|EDQ51050.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1214
Score = 117 bits (293), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 222/504 (44%), Gaps = 61/504 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + L+ D V E K++ I + + L G +F S G+
Sbjct: 297 FLLQTEYGDIFKVTLD----YDKDDQVTELKIKYFDTIPVTSAMCVLKAGFLFAASEFGN 352
Query: 142 SQLVK---LNRSPDENGTYVSVMES----------------------FTNLAPIIDMVVV 176
L + + P+ + +++E+ +L PI+DM V
Sbjct: 353 HSLYQFQSIGEDPEVESSSSTLVETEEGYQPVFFQPRKLKNLVQIDDIESLMPIMDMKVA 412
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNT 235
+L + Q+ + G SLRI+R G+ + E A LPG+ +W + + D
Sbjct: 413 NLFEEETPQIFSLCGRGPRSSLRILRPGLAVTEMAVSPLPGVPSAVWTVKKHANDEFDAY 472
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+V+SFV T VL++ G VEE GF + + +++QV PS I +
Sbjct: 473 IVVSFVNATLVLSI-GETVEEVSDSGFLDTTPSLAISLLGDDSLMQVHPSGIRHIRAD-- 529
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLD 353
R++ W+ P K+I V N+ QV+ A +G ++ Y E+ S ++ ++ R + +VACLD
Sbjct: 530 GRINEWKTPGKKTIVKVGYNRMQVVIALSGGELIYFEMDMSGQLMEIEKRDMTGDVACLD 589
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMT 410
I+P+ +++ AVG + D + R+LSL + C + L + + P S+L+
Sbjct: 590 IAPVPEGRQ-----RSRFLAVGSY-DSTIRILSLDP--DDCMQILSVQAVSSPPESLLLL 641
Query: 411 CFE------------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR 458
+ +L L +G + +D +G+L+D + LG + L +
Sbjct: 642 EVQASTGGEDGADHPASVFLNAGLQNGVLLRTEVDMVTGQLSDTRTRFLGLRAPKLFSAL 701
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTF 517
+ S RP + Y + + ++ + + S +++ + +A+A D+ F
Sbjct: 702 VRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRVF 761
Query: 518 GTIDEIQKLHIRT-VPLGEAPRRI 540
TI+ + + +T VPL PR+
Sbjct: 762 -TIERLGETFNQTVVPLRYTPRKF 784
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 8/193 (4%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDP--NTYFVLGTA--VVHPEENEPKQGRI 1064
++D T +L E A SL + F ++ T +GTA + + E G I
Sbjct: 864 VLDPKTSTTTCLLELQENEAAFSLCAVNFHDNKELGTLIAVGTAKDLQFMPKKEASGGFI 923
Query: 1065 IIFHY-DDGKLQQIAEKE-IKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSH 1121
I+ + D+GK+ ++ K + G ++C+F G+LL + +R+++ K LR E +
Sbjct: 924 HIYRFADEGKVLELVHKTPVDGVPTALCQFQGRLLVGVGQVLRIYDLGKRKLLRKCENKN 983
Query: 1122 FNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF 1181
F N I + + GD I VGD+ S ++Y+ E + D P W+T+ +D +
Sbjct: 984 FPNTI-IAIHTYGDRIYVGDIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFDTM 1042
Query: 1182 LGAENSYNLFICQ 1194
GA+ N+++ +
Sbjct: 1043 AGADKFGNIYVMR 1055
>gi|224104491|ref|XP_002333932.1| predicted protein [Populus trichocarpa]
gi|222839243|gb|EEE77594.1| predicted protein [Populus trichocarpa]
Length = 221
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 93/142 (65%), Gaps = 9/142 (6%)
Query: 767 NVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQD 826
+VS RIG+P+ NG I IIDP+ R+IGL LY+GLFK+IP + +A S+R E L+
Sbjct: 3 DVSGRIGRPTNNGQIGIIDPDCRLIGLHLYDGLFKVIPSDNKGQLKQAFSMRHENLDGFF 62
Query: 827 VQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPL 886
+ FL + + + R+VKT+E++LK+K+F + W Q+N++ A+L+IPVP P
Sbjct: 63 ILFL---------SLQDNKDARYVKTYEVALKDKDFIEGRWSQNNLDNGANLLIPVPLPF 113
Query: 887 GGAIIIGQESILYHSGKSYVAV 908
G +IIG+E+++Y + + A+
Sbjct: 114 CGVLIIGEETVVYCNANVFRAI 135
>gi|328717412|ref|XP_003246201.1| PREDICTED: splicing factor 3B subunit 3-like [Acyrthosiphon pisum]
Length = 1218
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 118/521 (22%), Positives = 217/521 (41%), Gaps = 66/521 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G +F + LE E+ V E +++ + + + L G +FV S G+
Sbjct: 301 FLVQTEQGDVFKVTLETNEEF-----VTEIRLKYFDTVPVASAMCVLKTGFLFVASEFGN 355
Query: 142 SQLVKLNR--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDL 178
L ++ D+ + S M + +L+PI+ V DL
Sbjct: 356 HYLYQIANLGDDDDEPEFSSAMPLEEGDTFFFAPRQLRNLVLVDEMDSLSPIMACQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLV 237
+ QL G +LR++R+G+ + E A +LPG +W + + +N D ++
Sbjct: 416 AAEDTPQLYMACGRGSRSTLRVLRHGLEVSEMAVSELPGSPNAVWTVKRRADENFDAYII 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SF T VL++ G VEE GF T C + V+Q+ P+ I S R
Sbjct: 476 VSFSNATLVLSI-GETVEEVSDSGFLGTTPTLSCSPLGDDAVVQIYPNGVRHI--RSDKR 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCAT-GCDVYYLEV----HGSEIKQLAHRALEYEVACL 352
+ W+ P K I + N+ QV+ A G ++ Y E+ H +E K + + +V C+
Sbjct: 533 MHDWKAPEKKKIVKCAANQRQVVIALGGGELVYFEMDPTGHLNEHKD--RKEMNSDVLCM 590
Query: 353 DISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRS------ 406
++ + E S + AVGL TD + R++SL + + C L + IP
Sbjct: 591 ALANAPSGEQMS-----RFLAVGL-TDETVRIISLDTTD--CLVQLKMQAIPAMPESLCI 642
Query: 407 ILMTCFEG------------HCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVL 454
+ M +G YL + L +G + LD +G + D + LG +P L
Sbjct: 643 VEMGASDGGSSDEPAMNSLSMLYLNIGLQNGVLLRTVLDGVTGEMADTRARYLGGKPVKL 702
Query: 455 KTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST 514
R+ V A S R + Y ++ + ++ + + ++E P+ + + +T
Sbjct: 703 FKIRTRGNEAVLAMSSRSWLSYYYQNRFHLTPLSYESLEYASGFSSEQCPEGIVAISGNT 762
Query: 515 FTFGTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITT 554
++++ + + + P+ PR+ S V+ T
Sbjct: 763 LRILALEKLGAVFNQVSFPVEYTPRKFVIHPDSAHLIVVET 803
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 7/194 (3%)
Query: 1017 ILHAHQLFP-GEYALSLISSKFGEDPNTYFVL-GTA-VVHPEENEPKQGRIIIFHYDDG- 1072
I A FP E +S+ +F P++ FVL G A +H G I + +
Sbjct: 876 ITEAVYRFPQNEAVMSVALVRFSSYPDSQFVLFGVANELHLNPRHVTCGYIYTYKVNPTC 935
Query: 1073 -KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN-NIIALFL 1130
L+ + + + ++C F G+++ I +RL++ +K LR +C + ++ + +
Sbjct: 936 TSLELVHKTTVDNVPTAICGFQGRVIIGIGRILRLYDIGKKKLLR-KCENKQIPLLIMGI 994
Query: 1131 KVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNL 1190
+V G I V D+ S+ +++YK E + D P ++T++EILD A+ N+
Sbjct: 995 RVMGCRIYVSDVQESVYMVRYKRNENQLIIFADDTQPRYITAMEILDYNTVATADKCGNI 1054
Query: 1191 FICQKDSAATSDED 1204
+ + S+ + + D
Sbjct: 1055 SVVRLASSISDEVD 1068
>gi|308449821|ref|XP_003088088.1| hypothetical protein CRE_07177 [Caenorhabditis remanei]
gi|308249634|gb|EFO93586.1| hypothetical protein CRE_07177 [Caenorhabditis remanei]
Length = 236
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 129/215 (60%), Gaps = 9/215 (4%)
Query: 689 LNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMI 748
+NL+VA+ NRI++ V+PEGL+ V EI +YG++ M R +K+ L ++T+++ +
Sbjct: 29 VNLIVARGNRIDVQLVSPEGLKNVCEIPIYGQVLTMALVRCKREKRQSLVVVTEKWQMAV 88
Query: 749 LECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
L R + +++T+ G ++D+ G+ S+N + ++ + ++ +R Y G K+I E
Sbjct: 89 LTYR----DGKVITRTAGALADQSGRASDN-LFSLTIHRSGLVAIRAYEGSVKMIQWEPG 143
Query: 809 NFELKASSIRMEELEIQDVQFLHGCQNPT--IICIHQDVNGRHVKTHEISLKEKEFTKTP 866
++++ ++R + + D +F+ + T I I+ D +G+H++ ++++ +KE T
Sbjct: 144 T-DVRSFNVRFDYPNVSDFKFIDTGVDDTYRIAFIYDDDHGKHLQFSDLNMHDKEL-HTF 201
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHS 901
+Q +I +AS++IPVP P+ G +++ SILY S
Sbjct: 202 SRQASIAADASVLIPVPAPISGVLVLAANSILYKS 236
>gi|225448823|ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
Length = 1214
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 219/518 (42%), Gaps = 62/518 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE E + E K++ I + + L +G +F S G+
Sbjct: 297 FLLQTEYGDVFKVTLEHEND-----RISELKIKYFDTIPVTSSMCVLKSGFLFAASEFGN 351
Query: 142 S---QLVKLNRSPDENGTYVSVMES----------------------FTNLAPIIDMVVV 176
Q + D + S+ME+ +L PI+DM V
Sbjct: 352 HGLYQFQAIGDDADVESSSASLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPIMDMKVS 411
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNT 235
+L + Q+ G S+RI+R G+ I E A LPG+ +W + D
Sbjct: 412 NLFEEETPQIFALCGRGPRSSIRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+V+SF T VL++ G VEE GF + + +++QV PS I +
Sbjct: 472 IVVSFANATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED-- 528
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLD 353
R++ W P ++I V N+ QV+ A +G ++ Y EV + ++ ++ + +VACLD
Sbjct: 529 GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLD 588
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMT 410
I+P+ +++ AVG + D + R+LSL + C + L + + P S+L
Sbjct: 589 IAPVPEGRQ-----RSRFLAVGSY-DNTIRILSLDP--DDCMQILSVQSVSSPPESLLFL 640
Query: 411 CFEGHC------------YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR 458
+ +L L +G +F +D +G+L+D + LG + L +
Sbjct: 641 EVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVI 700
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTF 517
+ S RP + Y + + ++ + S +++ + +A+A D+ F
Sbjct: 701 VRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRVF 760
Query: 518 GTIDEIQKLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
TI+ + + TV PL PR+ Q + VI +
Sbjct: 761 -TIERLGETFNETVIPLRYTPRKFVLQPKRKLLVVIES 797
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 13/213 (6%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLGTAVVHPEENEPKQ- 1061
V + I+D T +L E A S+ + F + + T +GTA + PK+
Sbjct: 860 VSCIRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYGTLLAVGTA--KSLQFWPKRS 917
Query: 1062 ---GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR 1116
G I I+ + +DGK L+ + + +++G ++C+F G+LLA I S +RL++ + LR
Sbjct: 918 FDAGYIHIYRFLEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKRRLLR 977
Query: 1117 -LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
E F N I + + D I VGD+ S +Y+ E + D P W+T+
Sbjct: 978 KCENKLFPNTI-VSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYH 1036
Query: 1176 LDDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
+D + GA+ N++ + +D + +ED T
Sbjct: 1037 IDFDTMAGADKFGNIYFVRLPQDVSDEVEEDPT 1069
>gi|167390599|ref|XP_001739420.1| DNA damage-binding protein [Entamoeba dispar SAW760]
gi|165896898|gb|EDR24200.1| DNA damage-binding protein, putative [Entamoeba dispar SAW760]
Length = 1088
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 131/236 (55%), Gaps = 16/236 (6%)
Query: 1002 VEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ 1061
+E H++ +ID EI +H+L E+ALS+ + D FV+GTA P E EP
Sbjct: 735 IESHSIKLIDFRKMEIEDSHELKENEHALSI--EEIVVDEKEMFVIGTAFAKPNEVEPSS 792
Query: 1062 GRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLA-SINSTVRLFEW----TN-EKEL 1115
GRI+I DGKL+ + EK++ GA YS+ K LA SI + +FE+ TN E E+
Sbjct: 793 GRILIVQIKDGKLEIVFEKDVNGAVYSIKTLLKKYLAMSIEKKLVIFEYQRIITNGEFEV 852
Query: 1116 RLECSHFNNI--IALFLKVKGDFILVGDLMRSLTLLQYK---TMEGSFEEISRDYNPNWM 1170
+L+ N+ I L++K G+ ILVGDLM+S+++ + + E+SRD+ ++
Sbjct: 853 KLQEKGSCNVKLIGLYVKTMGNKILVGDLMKSISVYSFDNNGNNKNCLNEVSRDFYASYT 912
Query: 1171 TSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGL-VQCR 1225
T+IE +D+ +L ++++ NL + +S E R L +H VG+ + V C+
Sbjct: 913 TAIEFVDENCYLSSDSNSNLLVFNTNSTGNESE-RFRLNNCAHIH-VGECINVMCK 966
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 215/475 (45%), Gaps = 40/475 (8%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R LL D G++ ++ L++ K + + + L +IP + YLDN V+F GS+
Sbjct: 265 KRLLLSDNKGKMHLITLKENNKHEIELYYYPLEYQAL---TIPSTILYLDNSVLFWGSKG 321
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
GDS L+K+N E ++E+F N PI+DM + E + L+ C +++G+L+
Sbjct: 322 GDSHLIKINEKRCE------ILETFENRGPILDMTAIHDEITNKDDLLMCCNTYQQGTLK 375
Query: 200 IIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL----SGAEVE 255
+I +G+GI+ ++ GI ++ + +G+ + L++S+ +++V + +
Sbjct: 376 LISSGVGIDIICQNEMKGITHLYQVEMGNKE----YLIISYSDNSKVFESQQENNQLQFN 431
Query: 256 ETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCN 315
E E+ GF ++T G ++++ I ++ V+ ++ K I + N
Sbjct: 432 EIEIKGFNRKEETICSG------IIEIGEMKEICFVQVTREEVNIFDSEQLKLIQQIRVN 485
Query: 316 KNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACL-----DISPLSNEETSSEPAKAQ 370
K + C +Y +++ S+ ++ + E+ + DIS T +
Sbjct: 486 K---FISHSC-IYDEKLYISQSNEINVLNEKKEIKHIYSGENDISAF----TIGKEGTED 537
Query: 371 LAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYF 430
+ + W ++ L + + + G I +SI + + Y+++ +GDG + +
Sbjct: 538 VIGICYWDSNKMEIIKLENGNKNHIREINGNIYGKSIEIINNKEGMYIVIGMGDGRVLVY 597
Query: 431 SLD---PASGRLTDKKKV-TLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSN 486
++ G +T KV +G LKT + DRPT++ K+ +
Sbjct: 598 QMEELMEIEGEITKNYKVLDIGLSGIELKTLEINGMKYIMCLCDRPTLVSIYKGKIKTLS 657
Query: 487 VNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIA 541
VN ++ + + +SL +AT G I+EIQ +H +++ +G RI
Sbjct: 658 VNCSEIVSIVPFKMKECMNSLIVATKENIIIGNIEEIQSIHTKSLSIGVFISRIV 712
>gi|224109600|ref|XP_002315251.1| predicted protein [Populus trichocarpa]
gi|222864291|gb|EEF01422.1| predicted protein [Populus trichocarpa]
Length = 1213
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 217/517 (41%), Gaps = 60/517 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F ++L+ E VKE K++ I + + L +G +F S G+
Sbjct: 297 FLLQTEYGDIFKVMLDHEND-----KVKELKIKYFDTIPVTSSMCVLKSGFLFAASEFGN 351
Query: 142 SQLVK---LNRSPDENGTYVSVMES----------------------FTNLAPIIDMVVV 176
L + + D + ++ME+ +L PI+DM V
Sbjct: 352 HALYQFQAIGEEEDVEASSATLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPIMDMKVA 411
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNT 235
+L + Q+ + G SLRI+R G+ I E A LPG+ +W + D
Sbjct: 412 NLFDEETPQIFSLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNIYDEFDAY 471
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+V+SF T VL++ G VEE GF + + +++Q+ P+ I +
Sbjct: 472 IVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQIHPNGIRHIRED-- 528
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLD 353
R++ W P ++I V N+ QV+ A +G ++ Y EV + ++ ++ + +VACLD
Sbjct: 529 GRINEWRTPAKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLD 588
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMT 410
I+P+ +++ AVG + D + R+LSL + C + L + + P S+L
Sbjct: 589 IAPVPEGRQ-----RSRFLAVGSY-DNTIRVLSLDP--DDCMQILSVQSVSAPPESLLFL 640
Query: 411 CFEGHC------------YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR 458
+ +L L G +F +D +G+L+D + LG + L +
Sbjct: 641 EVQASIGGEDGADHPASLFLNAGLQTGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSIN 700
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFG 518
+ S RP + Y + + ++ + + S +++ + +
Sbjct: 701 VRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVSVAGDALRIF 760
Query: 519 TIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
TI+ + + + +PL PR+ Q + +I +
Sbjct: 761 TIERLGETFNETAIPLRYTPRKFVLQPKRKLLVIIES 797
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Query: 1022 QLFPGEYALSLISSKFGE-DPNTYFVLGTAVVHPEENEPKQ----GRIIIFHY-DDGK-L 1074
+L E A SL + F + + T +GTA + PK+ G I I+ + DDGK L
Sbjct: 877 ELQDNEAAFSLCTVNFHDKEHGTLLAVGTA--KGLQFWPKRSLVTGFIHIYKFVDDGKSL 934
Query: 1075 QQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVK 1133
+ + + +++G ++C+F G+LLA I S +RL++ ++ LR E F N I + +
Sbjct: 935 ELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKKRLLRKCENKLFPNTI-VSIHTY 993
Query: 1134 GDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFIC 1193
D I VGD+ S +Y+ E + D P W+TS +D + GA+ N++
Sbjct: 994 RDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTSSYHVDFDSMAGADKFGNIYFA 1053
Query: 1194 Q--KDSAATSDEDRT 1206
+ +D + +ED T
Sbjct: 1054 RLPQDVSDEIEEDPT 1068
>gi|367027320|ref|XP_003662944.1| hypothetical protein MYCTH_2304190 [Myceliophthora thermophila ATCC
42464]
gi|347010213|gb|AEO57699.1| hypothetical protein MYCTH_2304190 [Myceliophthora thermophila ATCC
42464]
Length = 1211
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 132/535 (24%), Positives = 221/535 (41%), Gaps = 64/535 (11%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +L+ G L + L+ E DG T V+ K++ I
Sbjct: 297 MHKLKG--SAGAFF------FLVQTEDGDLMKVTLDMVEDNDGNPTGEVRRLKIKYFDTI 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDS---QLVKLNRSPDE----------------NGTY--- 157
I + L L +G +F S G+ Q KL DE N Y
Sbjct: 349 PIAKSLCILKSGFLFAASEFGNHHFYQFEKLGDDDDEQEFTSDDFPTDPRASYNPVYFRP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+ ++ES ++ P++D V +L + Q+ G + R++++G+ + E
Sbjct: 409 RPLENLVLVESIDSMNPLVDCKVANLTGEDAPQIYAVCGNRARSTFRMLKHGLEVSEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPG +W + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGTPAAVWTTKLTKYDEYDGYIVLSFTNATLVLSI-GETVEEVTESGFLTSVPTLAV 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I + RV+ W P +SI + N+NQV+ A +G VY+
Sbjct: 528 QQMGEEGLIQVHPKG---IRHIVQGRVNEWPAPQHRSIVAAATNENQVVIALSSGEIVYF 584
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V L I + ++ AVG D + R+LSL
Sbjct: 585 EMDADGSLAEYDEKKEMSGTVTSLSIG-----KVPEGLRRSSFLAVGC-DDCTVRILSLD 638
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC-----YLLVALGDGSMFYFSLDPASGRLT 440
+LE + L P S+ + E YL + L G LD +G LT
Sbjct: 639 PESTLEMKSIQALTSA--PSSLSIMSMEDSTGGMTLYLHIGLHSGVYLRTVLDEVTGELT 696
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCSL 498
D ++ LG +PT L + V A S RP + Y+ V + +N ++ + +
Sbjct: 697 DTRQKFLGPKPTKLFQVSVQNQACVLALSSRPWLGYTDPITKNFVMTPLNYSELEYGWNF 756
Query: 499 NAESYPDSLALATDSTFTFGTIDEIQKLHI-RTVPLGEAPRRIAYQESSQTFGVI 552
N+E + + + TID++ + I +++PL P+R+ F I
Sbjct: 757 NSEQCLEGMVGIHANFLRIFTIDKLGETMIQKSIPLTYTPKRLVKHPEQPYFYTI 811
Score = 60.1 bits (144), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 6/200 (3%)
Query: 1016 EILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDD 1071
++L L E A+S F ++ ++ V+GT V++P + + FH D
Sbjct: 869 KVLQRIDLEGNEAAVSAAVVPFASQEGESFLVVGTGKDMVLNPRKFTEGYIHVYRFHEDG 928
Query: 1072 GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLK 1131
+L+ I + +++ ++ F G+LLA I +R+++ + LR + + L+
Sbjct: 929 RELEFIHKTKVEEPPLALIPFQGRLLAGIGKMLRVYDLGLRQLLRKAQGEVAPQLIVTLQ 988
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
+G I+VGD+ + +T + YK + D W T ++D E G + N++
Sbjct: 989 TQGSRIIVGDVQQGVTYVVYKPESNKLLVFADDTINRWTTCTTMVDYESVAGGDKFGNVW 1048
Query: 1192 I--CQKDSAATSDEDRTHLQ 1209
I C + ++ SDE + +Q
Sbjct: 1049 ILRCPERASQESDEPGSEIQ 1068
>gi|346971485|gb|EGY14937.1| pre-mRNA-splicing factor RSE1 [Verticillium dahliae VdLs.17]
Length = 1230
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 130/536 (24%), Positives = 221/536 (41%), Gaps = 65/536 (12%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E DG T VK K++ I
Sbjct: 315 MHKLKG--SAGAFF------FLLQTEDGDLFKITIDMIEDRDGNPTGEVKRLKIKYFDTI 366
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN---------------GTY------- 157
+ L L +G ++V S+ G+ Q + + D++ +Y
Sbjct: 367 PVASSLCILKSGFLYVASQFGNYQFYQFEKLGDDDEELEFSSDDFPTDPKQSYEAVFFHP 426
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
++++ES ++ P+ID V +L + Q+ T G + RI+++G+ + E
Sbjct: 427 RELENLALVESIDSMNPLIDCKVANLTGEDAPQIYTACGNGARSTFRILKHGLEVNEIVA 486
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPGI +W L + D +VLSF T VL++ G VEE GF + T
Sbjct: 487 SELPGIPSAVWTLKLSRGDQYDAYIVLSFTNATLVLSI-GETVEEVNDSGFLTSVPTLAA 545
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I +V+ W P +SI + N++QV A +G VY+
Sbjct: 546 QLLGGEGLIQVHPKG---IRHIRNGQVNEWAAPQHRSIVAATTNEHQVAVALSSGEIVYF 602
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V CL + E ++ AVG D + R+LSL
Sbjct: 603 EMDSDGSLAEYDEKKEMFGTVTCLSLG-----EVPEGRLRSSFLAVGC-DDSTVRVLSLD 656
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRL 439
+LE + L P S+ + E YL + L G LD +G L
Sbjct: 657 PETTLESKSVQALTAP--PTSLAVIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGEL 714
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCS 497
TD ++ LG +P L T V S RP + Y+ V + +N + +
Sbjct: 715 TDTRQKFLGPKPVKLFQVTVQGRTCVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWN 774
Query: 498 LNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
++E + + + I+++ L +++PL PRR+ F I
Sbjct: 775 FSSEQCEEGVVGIQGQSLRIFAIEKLGDTLTQKSIPLTYTPRRMVKHPEHPMFYTI 830
Score = 66.6 bits (161), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Query: 1039 EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGK 1095
+D ++ V+GT +V+P + I F D +L+ I + +++ ++ F G+
Sbjct: 912 QDNESFLVVGTGKDMIVNPRQFTEGYIHIYRFSEDGRELEFIHKTKVEEPPTALLAFQGR 971
Query: 1096 LLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTME 1155
L+A + T+R+++ ++ LR + + + L +G I+VGD+ + +T + YK +
Sbjct: 972 LVAGVGKTLRIYDLGQKQMLRKAQADVAPQLIVSLSTQGSRIVVGDVQQGVTYVVYKPLS 1031
Query: 1156 GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDED 1204
D WMT ++D E G + N+FI + A+ + D
Sbjct: 1032 NKLIPFVDDTVARWMTCTTMVDYESVAGGDKFGNIFIVRAPEKASQEAD 1080
>gi|403411971|emb|CCL98671.1| predicted protein [Fibroporia radiculosa]
Length = 1212
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 189/419 (45%), Gaps = 35/419 (8%)
Query: 153 ENGTYVSVMESFTNLAPIIDMVVVDL-ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHA 211
+N T V MES L+P++D V++L Q+ G + R++R+G+ +EE
Sbjct: 406 DNLTLVDEMES---LSPVLDAKVMNLLPNSDTPQVFAACGRGGRSTFRMLRHGLEVEEVV 462
Query: 212 CIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFY 270
DLPGI +W + D+ ++LSFV T VL + G +EE + GF S T
Sbjct: 463 SSDLPGIPNAVWTTKLKEDDPYDSYIILSFVNGTLVLCI-GETIEEVQDTGFLSSAPTLA 521
Query: 271 CGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VY 328
+ +LQV P + S RV+ W P GK+I + NK QV+ A VY
Sbjct: 522 VQQIGYDALLQVHPHG--IRHVLSDKRVNEWRVPQGKTIVAATTNKRQVVVALSSAELVY 579
Query: 329 Y-LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL 387
+ L++ G + +A+ V L I+ E + AVG D + R++SL
Sbjct: 580 FELDLDGQLNEYQDRKAMGSTVLALSIA-----EVPEGRQRTPYLAVGC-EDQTVRIVSL 633
Query: 388 ---PSLEEVCKEPLGGEIIPRSILMTCF--------EGHCYLLVALGDGSMFYFSLDPAS 436
+LE + + L P +I + + ++ + L +G + LDP +
Sbjct: 634 DPESTLETISLQALTAP--PSAICIADMLDAGINKTQPTSFVNIGLQNGVLLRTVLDPVN 691
Query: 437 GRLTDKKKVTLGTQPTVLKTFRSLSTTN--VFACSDRPTVIYSSNHKLVFSNVNLRQVNH 494
G+LTD + LGT+P +K R L N + A S R + Y+ + + F+ + +++
Sbjct: 692 GQLTDTRTRFLGTRP--IKLIRVLVQRNPGILALSSRSWLNYTYQNLMHFTPLIFENLDY 749
Query: 495 MCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
S +AE P+ L + S I ++ KL +PL PR+ ++ F +I
Sbjct: 750 AWSFSAELCPEGLIGISGSVLRIFQIPKLGTKLKQDAIPLSYTPRKFISHPTNGLFYLI 808
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 14/190 (7%)
Query: 1027 EYALSL----ISSKFGEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAE 1079
E A SL S++ GE + V+GTA + P R F D L+ + +
Sbjct: 880 EAAFSLAVVSFSARSGE---LHLVVGTAQDTFLAPRSCTSGFLRTYRFTDDGTNLELLHK 936
Query: 1080 KEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFIL 1138
E ++ F G+L+A + +RL++ +K LR +E F + I + L +G IL
Sbjct: 937 TETNDVPLAVLGFQGRLVAGVGKALRLYDMGKKKLLRKVENKTFASAI-VSLATQGSRIL 995
Query: 1139 VGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSA 1198
VGD+ S++ YK E + D P W +++ ++D A+ N+++ + D
Sbjct: 996 VGDMQESVSFAVYKPPENKLLVFADDTQPRWTSAMTMVDYNTVASADRFGNIYVNRLDPK 1055
Query: 1199 ATS--DEDRT 1206
+ D+D T
Sbjct: 1056 VSEQVDDDPT 1065
>gi|168046759|ref|XP_001775840.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672847|gb|EDQ59379.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1214
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 219/504 (43%), Gaps = 61/504 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + L+ D V E K++ I + + L +G +F S G+
Sbjct: 297 FLLQTEYGDIFKVTLD----YDKDDQVTELKIKYFDTIPVTSAMCVLKSGFLFAASEFGN 352
Query: 142 SQLVKLNR------SPDENGTYVSVMESFT-------------------NLAPIIDMVVV 176
L + + T V E + +L PI+DM V
Sbjct: 353 HSLYQFQSIGEEPEVESSSSTLVETEEGYQPIFFQPRKLKNLVQIDDIESLMPIMDMKVA 412
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNT 235
++ + Q+ + G SLRI+R G+ + E A LPG+ +W + + D
Sbjct: 413 NIFEEETPQIFSLCGRGPRSSLRILRPGLAVTEMAVSPLPGVPSAVWTVKKHANDEFDAY 472
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+V+SFV T VL++ G VEE GF + + +++QV PS I +
Sbjct: 473 IVVSFVNATLVLSI-GETVEEVSDSGFLDTTPSLAISLLGDDSLMQVHPSGIRHIRAD-- 529
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLD 353
R++ W+ P K+I V N+ QV+ A +G ++ Y E+ S ++ ++ R + +VACL
Sbjct: 530 GRINEWKTPGKKTIVKVGYNRMQVVIALSGGELIYFEMDMSGQLMEIEKRDMTGDVACLH 589
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMT 410
I+P+ +++ AVG + D + R+LSL + C + L + + P S+L+
Sbjct: 590 IAPVPEGRQ-----RSRFLAVGSY-DSTIRILSLDP--DDCMQILSVQAVSSPPESLLLL 641
Query: 411 CFE------------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR 458
+ +L L +G + +D +G+L+D + LG + L + R
Sbjct: 642 EVQASTGGEDGADHPASVFLNAGLQNGVLLRTEVDMVTGQLSDTRTRFLGLRAPKLFSAR 701
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTF 517
+ S RP + Y + + ++ + + S +++ + +A+A D+ F
Sbjct: 702 VRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRVF 761
Query: 518 GTIDEIQKLHIRT-VPLGEAPRRI 540
TI+ + + +T VPL PR+
Sbjct: 762 -TIERLGETFNQTVVPLRYTPRKF 784
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 8/193 (4%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDP--NTYFVLGTA--VVHPEENEPKQGRI 1064
++D T +L E A SL + F ++ T +GTA + + E G I
Sbjct: 864 VLDPKTSTTTCLLELQENEAAFSLCAVNFHDNKELGTLIAVGTAKNMQFMPKKESSGGFI 923
Query: 1065 IIFHY-DDGKLQQIAEKE-IKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSH 1121
I+ + ++G++ ++ K + G ++C+F G+LL + +R+++ K LR E +
Sbjct: 924 HIYRFVEEGRILELVHKTPVDGVPTALCQFQGRLLVGVGQVLRIYDLGKRKLLRKCENKN 983
Query: 1122 FNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF 1181
F N I + + GD I VGD+ S ++Y+ E + D P W+T+ +D +
Sbjct: 984 FPNTI-IAIHTYGDRIYVGDIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFDTM 1042
Query: 1182 LGAENSYNLFICQ 1194
GA+ N+++ +
Sbjct: 1043 AGADKFGNVYVMR 1055
>gi|224100909|ref|XP_002312063.1| predicted protein [Populus trichocarpa]
gi|222851883|gb|EEE89430.1| predicted protein [Populus trichocarpa]
Length = 1213
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/518 (22%), Positives = 222/518 (42%), Gaps = 62/518 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + L+ E VKE K++ I + + L +G +F S G+
Sbjct: 297 FLLQTEYGDIFKVTLDHEND-----KVKELKIKYFDTIPVTSSICVLKSGFLFAASEFGN 351
Query: 142 SQLVK---LNRSPDENGTYVSVMES----------------------FTNLAPIIDMVVV 176
L + + D + ++ME+ +L P++DM V
Sbjct: 352 HALYQFQAIGEEEDVEASSATLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPVMDMKVA 411
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNT 235
++ + Q+ + G SLRI+R G+ I E A LPG+ +W + + D
Sbjct: 412 NIFDEETPQIFSLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKRNANDEFDAY 471
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+V+SF T VL++ G VEE GF + + +++Q+ P+ I +
Sbjct: 472 IVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQIHPNGIRHIRED-- 528
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLD 353
R++ W P ++I V N+ QV+ A +G ++ Y EV + ++ ++ + +VACLD
Sbjct: 529 GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLD 588
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMT 410
I+P+ +++ AVG + D + R+LSL + C + L + + P S+L
Sbjct: 589 IAPVPEGRQ-----RSRFLAVGSY-DNTIRVLSLDP--DDCMQILSVQSVSAPPESLLFL 640
Query: 411 CFEGHC------------YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR 458
+ +L L G +F +D +G+L+D + LG + L
Sbjct: 641 EVQASIGGEDGADHPASLFLNAGLQTGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFAIN 700
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTF 517
+ S RP + Y + + ++ + + S +++ + +A+A D+ F
Sbjct: 701 VRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRIF 760
Query: 518 GTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
TI+ + + + +PL PR+ Q + +I +
Sbjct: 761 -TIERLGETFNETAIPLRYTPRKFVLQPKRKLLVIIES 797
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 6/150 (4%)
Query: 1062 GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LE 1118
G I I+ + DDGK L+ + + +++G ++C+F G+LLA I S +RL++ ++ LR E
Sbjct: 920 GFIHIYKFVDDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKKRLLRKCE 979
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
F N I + + D I VGD+ S +Y+ E + D P W+T+ +D
Sbjct: 980 NKLFPNSI-VSIHTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTASYHVDF 1038
Query: 1179 ELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
+ GA+ N++ + +D + +ED T
Sbjct: 1039 DTMAGADKFGNIYFVRLPQDVSDEIEEDPT 1068
>gi|302406266|ref|XP_003000969.1| pre-mRNA-splicing factor rse-1 [Verticillium albo-atrum VaMs.102]
gi|261360227|gb|EEY22655.1| pre-mRNA-splicing factor rse-1 [Verticillium albo-atrum VaMs.102]
Length = 1059
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 130/536 (24%), Positives = 221/536 (41%), Gaps = 65/536 (12%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E DG T VK K++ I
Sbjct: 297 MHKLKG--SAGAFF------FLLQTEDGDLFKITIDMIEDRDGNPTGEVKRLKIKYFDTI 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN---------------GTY------- 157
+ L L +G ++V S+ G+ Q + + D++ +Y
Sbjct: 349 PVASSLCILKSGFLYVASQFGNYQFYQFEKLGDDDEELEFSSDDFPTDPKQSYEAVFFHP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
++++ES ++ P+ID V +L + Q+ T G + RI+++G+ + E
Sbjct: 409 RELENLALVESIDSMNPLIDCKVANLTGEDAPQIYTACGNGARSTFRILKHGLEVNEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPGI +W L + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGIPSAVWTLKLSRGDQYDAYIVLSFTNATLVLSI-GETVEEVNDSGFLTSVPTLAA 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I +V+ W P +SI + N++QV A +G VY+
Sbjct: 528 QLLGGEGLIQVHPKG---IRHIRNGQVNEWAAPQHRSIVAATTNEHQVAVALSSGEIVYF 584
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V CL + E ++ AVG D + R+LSL
Sbjct: 585 EMDSDGSLAEYDEKKEMFGTVTCLSLG-----EVPEGRLRSSFLAVGC-DDSTVRVLSLD 638
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRL 439
+LE + L P S+ + E YL + L G LD +G L
Sbjct: 639 PETTLESKSVQALTAP--PTSLAVIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGEL 696
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCS 497
TD ++ LG +P L T V S RP + Y+ V + +N + +
Sbjct: 697 TDTRQKFLGPKPVKLFQVTVQGRTCVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWN 756
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQK-LHIRTVPLGEAPRRIAYQESSQTFGVI 552
++E + + + I+++ L +++PL PRR+ F I
Sbjct: 757 FSSEQCEEGVVGIQGQSLRIFAIEKLSDTLTQKSIPLTYTPRRMVKHPEHPMFYTI 812
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 1039 EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGK 1095
+D ++ V+GT +V+P + I F D +L+ I + +++ ++ F G+
Sbjct: 894 QDNESFLVVGTGKDMIVNPRQFTEGYIHIYRFSEDGRELEFIHKTKVEEPPTALLAFQGR 953
Query: 1096 LLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTME 1155
L+A + T+R+++ ++ LR + + + L +G I+VGD+ + +T + YK +
Sbjct: 954 LVAGVGKTLRIYDLGQKQMLRKAQADVAPQLIVSLSTQGSRIVVGDVQQGVTYVVYKALS 1013
Query: 1156 GSFEEISRDYNPNWMTSIEILDDE 1179
D WMT ++D E
Sbjct: 1014 NKLIPFVDDTVARWMTCTTMVDYE 1037
>gi|326432370|gb|EGD77940.1| splicing factor 3b subunit 3 [Salpingoeca sp. ATCC 50818]
Length = 1232
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/500 (22%), Positives = 214/500 (42%), Gaps = 55/500 (11%)
Query: 90 RLFMLLLEKEEKMDGTFSVKEPKVELLG-------EISIPECLTYLDNGVVFVGSRLGDS 142
R+F L++ EE ++ K E+ G + + + L NG++FV + G+
Sbjct: 305 RMFFFLVQTEEGDLFKLTMVAEKGEVSGLIIKYFDTVPVANAMCLLRNGLLFVAAEYGNH 364
Query: 143 QLVKLNRSPD--ENGTYVSV-------------------MESFTNLAPIIDMVVVDLERQ 181
L ++ D + +Y+S+ ++ +L P+I + DL +
Sbjct: 365 HLYQIASLGDNEDEPSYLSIDPLDKIHYFRPRDLLNLALVDDQESLHPMIACQLADLHEE 424
Query: 182 GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSF 240
QL G + S R++R+G+ + E A +LPG +W++ D LVLSF
Sbjct: 425 ETPQLYALCGRGAKSSFRVLRHGLEVSEVAVSELPGNPSAVWSVKRHVDDESDTYLVLSF 484
Query: 241 VGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSS 300
V T VL + G VEE + GF + T + ++LQV P I + RV
Sbjct: 485 VDKTLVLGI-GETVEEVKDSGFLEEVPTLSASRIGDDSLLQVYPGGIRHIRFDQ--RVKE 541
Query: 301 WEPPNGKSISVVSCNKNQVLCATGCD--VYYLEVHGSEIKQLAHR-ALEYEVACLDISPL 357
W+ P +I+ + N+ QV+ + VY+ ++ + R + +V + ++P+
Sbjct: 542 WKAPGSTAITNCAVNERQVVITLSSNELVYFELDRAGQLNEYTERIEMTSKVTAMALAPV 601
Query: 358 SNEETSSEPAKAQLAAVGLWTDISARLLSL-PSLEEVCKEPLGGEIIPRSILMTCF---- 412
+ + +S Q A+GL D + R+LSL PS C +PL + +P + C
Sbjct: 602 AEDAFTS-----QFLALGL-EDNTVRVLSLDPS---SCLQPLRMQALPGAPSSLCIIEIA 652
Query: 413 -----EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFA 467
G L + L +G + ++D +G L+D + LG + L R+ V A
Sbjct: 653 GQAGEPGTLQLHIGLANGVVSRSTMDKVTGDLSDSRTRYLGVREVRLFPVRAHGHPAVLA 712
Query: 468 CSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKL- 526
S RP + ++ + + ++ + + +E P+ + +T ++ + +
Sbjct: 713 LSTRPWIAFTYQGQPRMAPLSYEALEYAHMFCSEQLPEGIVAVAKNTLRILSLQNLGSIF 772
Query: 527 HIRTVPLGEAPRRIAYQESS 546
+ T+PL PR+ E +
Sbjct: 773 NQSTIPLAYTPRKFFLDEKT 792
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 9/147 (6%)
Query: 1066 IFHYDDG-----KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LEC 1119
+F DG KL + E++ ++ F G+L+A + + VR+++ +K LR E
Sbjct: 939 LFSAPDGSARLTKLDFVHRTEVEAMPCALTPFAGRLIAGVGNIVRIYDMGRKKLLRKCEN 998
Query: 1120 SHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE 1179
H + + + ++V G ++V D S+ L+YK E D P W T++ ++D
Sbjct: 999 KHLPSRV-VDIEVMGTRVVVADQRESVFFLKYKPTENVLSVFCDDTTPRWCTAMLMVDYS 1057
Query: 1180 LFLGAENSYNLFI--CQKDSAATSDED 1204
A+ N+ + C D T ED
Sbjct: 1058 TVCVADKFGNVSVLRCPDDVTDTLQED 1084
>gi|268568396|ref|XP_002640241.1| C. briggsae CBR-TAG-203 protein [Caenorhabditis briggsae]
Length = 1218
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 221/511 (43%), Gaps = 56/511 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G +F + LE +E + V E K++ + L L G +FV + G+
Sbjct: 301 FLIQAENGDIFKVTLETDEDL-----VTEMKLKYFDTVPPANALCILKAGFLFVAAEFGN 355
Query: 142 SQLVKLNRSPDENGT--YVSVM---------------------ESFTNLAPIIDMVVVDL 178
+L ++ S E G + S M +S +L+P+ D V+ D+
Sbjct: 356 HELYQI-ASLGEGGDDEFSSAMGFGENDAAFFEPHELRSLIPIDSMDSLSPLTDAVIGDI 414
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
R+ QL T G ++++RNG+ I E A DLPG +W + D+ +V
Sbjct: 415 AREDAAQLFTLVGRGARSHMKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYIV 474
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T LT+ G VEE GF T C + +++Q+ I + R
Sbjct: 475 VSFVNATLTLTI-GDTVEEASDSGFLPTTPTIGCSMIGDDSLVQIYSEGIRHIRADK--R 531
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH-GSEIKQLAHRAL-EYEVACLDI 354
++ W+ P + I + N+ QV A +G ++ Y E+ + + R L ++AC+
Sbjct: 532 INEWKAPPRRQIVKCAVNRRQVAVALSGGELVYFELDLNGTLNEFTERKLFNADIACMTF 591
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILM-- 409
S +S E +S + A+G D + R++SL + + PL + + P SIL+
Sbjct: 592 SEISEGELNS-----RFLALGT-VDNAVRIISLDPNDMLM--PLSTQNLPCPPESILLID 643
Query: 410 TCFE-----GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
T E +L + L +G +F ++D +G + D + LGT+P + K + +
Sbjct: 644 TPNEDGKGVASVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPKLFKV-QVQGRSA 702
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
+ S R ++Y + + ++ + + S + + + + ST +++
Sbjct: 703 ILCTSSRSWLLYHFQRRFHLTPLSYANLEYAASFCSNQCAEGVVAISASTLRIIAAEKLG 762
Query: 525 -KLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
++++ PRRIA + VI T
Sbjct: 763 VAFNVQSFEHKMTPRRIAVHPTMPCLVVIET 793
>gi|348667612|gb|EGZ07437.1| hypothetical protein PHYSODRAFT_565381 [Phytophthora sojae]
Length = 1197
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 212/521 (40%), Gaps = 65/521 (12%)
Query: 91 LFMLLLEKE----EKMDGTFS---VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQ 143
LF +LL+ E K+ +S V+E K++ + + + G++F S +
Sbjct: 292 LFFVLLQSELGDLYKISLDYSGNAVEEIKIQFFDTVPVASSMCITKTGLLFCASEFSNHY 351
Query: 144 LVK---------------LNRSPDENGTY-------VSVMESFTNLAPIIDMVVVDLERQ 181
L + L P E T+ + + S +L+P+ ++V DL +
Sbjct: 352 LFQFLSIGEGDDTAKCSSLAMDPTELSTFPLRKLTNLQLASSMPSLSPVTQLLVDDLANE 411
Query: 182 GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSF 240
Q+ G SLR++R+G+ I E A LPG+ K +W L D +V+SF
Sbjct: 412 QTPQMYALCGNSNRSSLRVLRHGLPITEMAASALPGVAKAVWCLKESYADPYDKYIVVSF 471
Query: 241 VGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSS 300
T VL + G VEE GF D + ++ + LQ+ + + V+
Sbjct: 472 EDATLVLEV-GETVEEVTQSGFLRDHGSLLVALLEDDSKLQIHANG--IRHVPKFQPVTE 528
Query: 301 WEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDISPLS 358
W+ P K I + N QV+ + G ++ Y E+ S E+ + L +EV LD+
Sbjct: 529 WKAPGKKVIEHCAANSRQVVISLAGGEIIYFELGQSGELAEKGKLDLGFEVCSLDLG--- 585
Query: 359 NEETSSEPAKAQLAAVGLWTDISARLLSL-PSLEEVCKEPLGGEIIPRSILMTCFEGH-- 415
E + Q AVG W D + R+LSL P+ K L P ++ + +
Sbjct: 586 --EVPEGRQRFQFMAVGSW-DNTVRILSLDPNDLFRQKSTLALTSHPHTLCLAQLQSEPS 642
Query: 416 ----------CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNV 465
+L + L +G + +DP + LTD + LGT P L ++
Sbjct: 643 TPDSEHSSQSLFLSIGLDNGVLQQSLIDPITANLTDSRSRFLGTNPVKLFRVAVEGKRSI 702
Query: 466 FACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-- 523
A S R + Y + + ++ +++ S N+E P + T+ T+D++
Sbjct: 703 LALSSRSWISYFHQTRRHLTPLSCELLSYASSFNSEQCPGGIVALTNEGMKILTVDQLGD 762
Query: 524 ----QKLHIRTVP----LGEAPRRIAYQESSQT-FGVITTR 555
QK ++R P + A RR+ ES +G R
Sbjct: 763 TFNQQKCNLRYTPRKAVVHAASRRLVVIESDHNEYGAAYKR 803
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 8/202 (3%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAV----VHPEENEPKQGRI 1064
I+D + + + +L E A S+ S F + F++ V +HP++ P G +
Sbjct: 850 IVDPVSCQTVVCEELDVDERARSIASCVFHDRGGEAFIIVGTVKKMQLHPQK-APAGGYL 908
Query: 1065 IIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHF 1122
++ +G +L + EI ++MCEF G+LL S+ +R+++ +K LR E +F
Sbjct: 909 RVYRVVEGMQLVLVHTTEIDDIPHAMCEFQGRLLVSVGRALRIYDLGKKKMLRKCENRNF 968
Query: 1123 NNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFL 1182
+I+ + LK GD I D+ S ++YK E + D P ++TS +LD +
Sbjct: 969 PSIL-VELKAAGDRIYASDMHESFHFVKYKKDENQLVIFADDCVPRFITSSVLLDYDTLC 1027
Query: 1183 GAENSYNLFICQKDSAATSDED 1204
GA+ N+F+ + S + + D
Sbjct: 1028 GADKFGNVFVSRLPSEVSDEID 1049
>gi|341886300|gb|EGT42235.1| hypothetical protein CAEBREN_28831 [Caenorhabditis brenneri]
Length = 1005
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 212/491 (43%), Gaps = 55/491 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E + V E K++ + + L +G +FV + G+ +L ++
Sbjct: 309 GDVFKVTLETDEDL-----VTEMKLKYFDTVPPANAMCILKSGFLFVAAEFGNHELYQIA 363
Query: 149 RSPDENGT--YVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
S E G + S M +S +L+P+ D V+ D+ R+ Q
Sbjct: 364 -SLGEGGDDEFSSAMGFGENDAAFFEPHELRSLIPIDSMDSLSPLTDAVIGDVAREDAAQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L T G +L+++RNG+ I E A DLPG +W + D+ +V+SFV T
Sbjct: 423 LYTLVGRGARSNLKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYIVVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
LT+ G VEE GF T C + +++Q+ I + R++ W+ P
Sbjct: 483 LALTI-GDTVEEASDSGFLPTTPTIGCSMIGDDSLVQIYAEGIRHIRADK--RINEWKAP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH-GSEIKQLAHRAL-EYEVACLDISPLSNEE 361
+ I N+ QV A +G ++ Y E+ + + R L ++AC+ S +S E
Sbjct: 540 PRRQIVKCCVNRRQVAVALSGGELVYFELDLNGTLNEFTERKLFNADIACMTFSEISEGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMTCFE----- 413
+S + A+G D + R++SL + + PL + + P SIL+
Sbjct: 600 LNS-----RFLALGT-VDNAVRIISLDPNDMLM--PLSTQNLPCPPESILLIDTPNDDGK 651
Query: 414 --GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDR 471
+L + L +G +F ++D +G + D + LGT+P L + + + S R
Sbjct: 652 GVAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQVQGRSAILCTSSR 711
Query: 472 PTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ-KLHIRT 530
++Y + + ++ + + S + + + + ST +++ ++++
Sbjct: 712 SWLLYHFQRRFHLTPLSYVNLEYAASFCSNQCAEGIVAISSSTLRIIAAEKLGVAFNVQS 771
Query: 531 VPLGEAPRRIA 541
PRRIA
Sbjct: 772 FEQKMTPRRIA 782
>gi|341886293|gb|EGT42228.1| CBN-TEG-4 protein [Caenorhabditis brenneri]
Length = 1006
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 212/491 (43%), Gaps = 55/491 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E + V E K++ + + L +G +FV + G+ +L ++
Sbjct: 309 GDVFKVTLETDEDL-----VTEMKLKYFDTVPPANAMCILKSGFLFVAAEFGNHELYQI- 362
Query: 149 RSPDENGT--YVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
S E G + S M +S +L+P+ D V+ D+ R+ Q
Sbjct: 363 ASLGEGGDDEFSSAMGFGENDAAFFEPHELRSLIPIDSMDSLSPLTDAVIGDVAREDAAQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L T G +L+++RNG+ I E A DLPG +W + D+ +V+SFV T
Sbjct: 423 LYTLVGRGARSNLKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYIVVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
LT+ G VEE GF T C + +++Q+ I + R++ W+ P
Sbjct: 483 LALTI-GDTVEEASDSGFLPTTPTIGCSMIGDDSLVQIYAEGIRHIRADK--RINEWKAP 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH-GSEIKQLAHRAL-EYEVACLDISPLSNEE 361
+ I N+ QV A +G ++ Y E+ + + R L ++AC+ S +S E
Sbjct: 540 PRRQIVKCCVNRRQVAVALSGGELVYFELDLNGTLNEFTERKLFNADIACMTFSEISEGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMTCFE----- 413
+S + A+G D + R++SL + + PL + + P SIL+
Sbjct: 600 LNS-----RFLALGT-VDNAVRIISLDPNDMLM--PLSTQNLPCPPESILLIDTPNDDGK 651
Query: 414 --GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDR 471
+L + L +G +F ++D +G + D + LGT+P L + + + S R
Sbjct: 652 GVAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQVQGRSAILCTSSR 711
Query: 472 PTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ-KLHIRT 530
++Y + + ++ + + S + + + + ST +++ ++++
Sbjct: 712 SWLLYHFQRRFHLTPLSYVNLEYAASFCSNQCAEGIVAISSSTLRIIAAEKLGVAFNVQS 771
Query: 531 VPLGEAPRRIA 541
PRRIA
Sbjct: 772 FEQKMTPRRIA 782
>gi|156084934|ref|XP_001609950.1| splicing factor 3b, subunit 3, 130kD [Babesia bovis T2Bo]
gi|154797202|gb|EDO06382.1| splicing factor 3b, subunit 3, 130kD, putative [Babesia bovis]
Length = 1169
Score = 113 bits (282), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 175/380 (46%), Gaps = 45/380 (11%)
Query: 128 LDNGVVFVGSRLGDSQLVKLNR-SPDENGTYVS----------------------VMESF 164
L G +FV + GD QL + +EN S +++
Sbjct: 342 LRAGYLFVAAEFGDHQLYQFTGIGTNENDPLCSSIHPQGKDAIVAFKPRVNQNLQLVDEL 401
Query: 165 TNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWA 223
++L+ I D+ V+D++ GQ Q+ G + +LR++R+G+ +EE A +LPG K +W
Sbjct: 402 SSLSAITDLKVIDVQGLGQQQIFLGCGKGERSTLRVLRHGLSVEELADNELPGRPKQVWT 461
Query: 224 LSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVT 283
+ G D +++ F G+T VL++ G VEE F + T + + + +QV
Sbjct: 462 VPTGVDSIYDGFILVGFEGNTLVLSV-GEAVEEVTDSCFLTSITTLHVSMMGDGSYIQVH 520
Query: 284 PSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ-VLCATGCDVYYLEVHGSE-IKQLA 341
+ +V W+ P K + V + N++Q VL +G ++ Y E+ S + ++A
Sbjct: 521 DGG---VRHVYDMKVREWKTPTAKRVKVAASNQHQLVLALSGGELVYFELDESHTLVEVA 577
Query: 342 HRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP-SLEEVCKEPLGG 400
R+L E+ CL + P T+ A +VG ++ R+LSL L++ + L
Sbjct: 578 KRSLNVEITCLSLQP-----TAKGRLMANFMSVGALDNL-VRVLSLDRQLKQYSTQLLPN 631
Query: 401 EIIPRSILMTCFEGHCY----LLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKT 456
P S+ + F+ + L+V L G M ++D SG L+D+ LG++ K
Sbjct: 632 NSTPESVCIAEFQIGTHPVLMLVVGLNTGVMIRATIDAVSGALSDQYTRFLGSRAVKFKY 691
Query: 457 FRSLSTTNVFACSDRPTVIY 476
++ V SDRP ++Y
Sbjct: 692 IKN----QVIGTSDRPWLLY 707
Score = 43.5 bits (101), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 1081 EIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSH--FNNIIALFLKVKGDFIL 1138
+ G + + G+LLAS+ +RL+ +K+L L+ H ++ ++L G I
Sbjct: 914 RVGGVVRAFTGYEGRLLASVGKRIRLYAL-GKKQLLLKAEHRTCSDHGFIWLNAVGSRIF 972
Query: 1139 VGDLMRSLTLLQ---YKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQK 1195
GD+ + +L+ Y FE + P W+TS LD + + ++F+
Sbjct: 973 AGDIREGIQILRIKFYSEEAAEFEWVGGATGPRWLTSCAQLDYSTVIAGDKFDSIFV--- 1029
Query: 1196 DSAATSDEDRTHLQ 1209
+ +E H+Q
Sbjct: 1030 -TRVPQEESTRHIQ 1042
>gi|409075182|gb|EKM75565.1| hypothetical protein AGABI1DRAFT_64324 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1213
Score = 113 bits (282), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 212/506 (41%), Gaps = 64/506 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G LF + +E E++ VK K++ + + L L +G +FV S G+
Sbjct: 307 FLLQSEDGDLFKVTIEHEDE-----EVKALKIKYFDTVPVASSLCILKSGFLFVASEFGN 361
Query: 142 SQLVKLNRSPDEN-----------------------GTY--------VSVMESFTNLAPI 170
L + + D++ Y +++ + +L PI
Sbjct: 362 HYLYQFQKLGDDDEEPEFSSTSFPSSGMAEPQAALPRVYFKPRPLDNLALADELESLDPI 421
Query: 171 IDMVVVDL-ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGS 228
ID V++L Q+ G SLR +++G+ +EE DLPGI +W
Sbjct: 422 IDSKVLNLLPNSDTPQIFAACGRGARSSLRTLQHGLEVEESVSSDLPGIPNAVWTTKRNE 481
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
D+ ++LSFV T VL++ G +EE + GF S T + +LQV P
Sbjct: 482 DDPYDSYIILSFVNGTLVLSI-GETIEEVQDTGFLSSAPTLAVQQIGSDALLQVHPHG-- 538
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRAL 345
+ + RV+ W P+ K+I + NK QV+ A VY+ L++ G + +A+
Sbjct: 539 IRHVLADRRVNEWRVPSNKTIVAATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAM 598
Query: 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEI 402
V L I + + AVG D + R++SL +LE + + L
Sbjct: 599 GSTVLALSIGDVPEGRQ-----RTPYLAVGC-EDQTVRIISLDPESTLETISLQALTAP- 651
Query: 403 IPRSILMTCF--------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVL 454
P +I + + ++ + L +G + LDP +G+LTD + LGT+P L
Sbjct: 652 -PSAICIADMLDASINKAQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKL 710
Query: 455 KTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST 514
+ A S R + Y+ + + F+ + +++ S +AE P+ L + S
Sbjct: 711 VRVLIHKHPAILALSSRSWLNYTYQNFMHFTPLIYENLDYAWSFSAELSPEGLIGISGSV 770
Query: 515 FTFGTIDEIQ-KLHIRTVPLGEAPRR 539
+ + KL ++PL PR+
Sbjct: 771 LRIFHVPRLGIKLKQDSIPLSYTPRK 796
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 1006 NLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT-YFVLGTAV---VHPEENEPKQ 1061
N+ IID + + L E A SL F N + V+GTA + P
Sbjct: 860 NIRIIDPVEGKTISVVPLDGNESAFSLAVVPFSAKGNELHLVVGTAADTKLSPRTCSTGF 919
Query: 1062 GRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECS 1120
R+ F D +L+ + + EI ++ F G+L+A + +R+++ +K LR +E
Sbjct: 920 LRVYKFLEDGRQLELVHKTEIDDVPLALMAFQGRLVAGVGKALRIYDIGKKKMLRKVENK 979
Query: 1121 HFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDEL 1180
F + I + L +G ILVGD+ S+ YK E + D P W+++ ++D
Sbjct: 980 QFGSAI-VTLSTQGSRILVGDMQESIFFAVYKAPENRLLIFADDSQPRWISAATMVDYNT 1038
Query: 1181 FLGAENSYNLFICQKDSAATS--DEDRT 1206
+ A+ N+F+ + D + DED T
Sbjct: 1039 VVAADRFGNIFVNRLDPRVSDQVDEDPT 1066
>gi|291000406|ref|XP_002682770.1| predicted protein [Naegleria gruberi]
gi|284096398|gb|EFC50026.1| predicted protein [Naegleria gruberi]
Length = 1216
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 190/427 (44%), Gaps = 29/427 (6%)
Query: 154 NGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI 213
N T + ++ +LAP+ DM V DL +G Q+ +G SLR +R G+ + E
Sbjct: 407 NVTCLELVNEIKSLAPVTDMKVTDLMGEGTPQIYCLNGRGPTSSLRSLRYGLPVNEEVAA 466
Query: 214 DL-PGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCG 272
L I+ + D ++LSF T VL++ G V E GF + +T Y
Sbjct: 467 PLDQQATAIFTVKESMNDTFDKYIILSFSEFTMVLSV-GENVAEVTESGFLTTTKTIYAS 525
Query: 273 NV-DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYL 330
N+ + +QV P I + RV+ W N K I + N Q++ + +G ++ Y
Sbjct: 526 NIGESGEFVQVHPKGIRHIHPD---RVNEWNSGN-KIIEKAAVNGYQIVVSLSGGEIIYF 581
Query: 331 EVHGSE--IKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP 388
E S + + L +VACL +SP+ + T + + AVG + D + RL+SL
Sbjct: 582 EYDTSSGNLIETERNDLSQDVACLALSPIQDGRT-----RGRFLAVGFY-DKTVRLISLG 635
Query: 389 SLEEVC---KEPLGGEIIPRSI-LMTCFEGHC------YLLVALGDGSMFYFSLDPASGR 438
+ + ++ L + P S+ L+ GH YL + L +G + ++D ++G
Sbjct: 636 EYDMMSILSRQALPAD--PESLSLIELQSGHSRDETSLYLNIGLSNGILLRSTVDSSTGE 693
Query: 439 LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSL 498
L+D + LGT+ L+ + + A S +P + S N K+ + ++ +N C+
Sbjct: 694 LSDTRSRFLGTKGVKLRNVKVRGDNAILALSSKPWLGNSINGKIEMTPLSYPALNSACNF 753
Query: 499 NAESYPDSLALATDSTFTFGTIDE-IQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
++E D L T TI + K +PL PR+ + + ++ T +
Sbjct: 754 SSEQIRDGLVSITAEHLRIITISSLLDKFTPEIIPLNYTPRKFVVHDETSHMIILQTDHN 813
Query: 558 IQEADGS 564
+ + + +
Sbjct: 814 VSKENST 820
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 1062 GRIIIFHY-DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LEC 1119
G I +F +DGKLQ I + E++ Y++ F G+LL + + +R+++ +K LR E
Sbjct: 922 GYINVFQISEDGKLQLIHKTEVEDVPYALHAFRGRLLVGVKNMLRIYDLGKKKLLRKCEN 981
Query: 1120 SHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE 1179
F N I + V G+ I VGD+ S +++ + E S + + P W+T+ ++D
Sbjct: 982 KSFPNFITS-IAVDGNRIFVGDITESFHFVKFNSSENSLTIFADNTTPRWLTASALVDHN 1040
Query: 1180 LFLGAENSYNLFICQKDSAATSDE 1203
G + N FI + S SDE
Sbjct: 1041 TIAGGDKFGNFFISRLPSDV-SDE 1063
Score = 40.4 bits (93), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 24/228 (10%)
Query: 691 LVVAKNNRIEIHTVTPEG-LRPVKEIFLYGKIAVMKFFR-GPTDKKDLLFIITQRYNAMI 748
+V+AK N +E++ G L+ + ++G I + F+ T +KD + I + + +I
Sbjct: 40 IVMAKGNILELYECEENGNLKCLISQDVFGVIRSITSFKFSNTVEKDYIAIGSDSGSIVI 99
Query: 749 LECRGDIDNL-EILTKAHGNVSDRIGKPSENGIIAIIDPEAR--VIGLRLYNGLFKIIPL 805
LE +++ +I + +G R P G DP+ R +IG ++ +
Sbjct: 100 LEVNSNLNKFTQIHHETYGKTGCRRIVP---GQYLAADPKGRALMIGAVEKQKFVYVLNM 156
Query: 806 EKDNFELKA--SSIRMEELEIQDVQFLHGCQNPTIICIHQDVNG------------RHVK 851
+ D+ + + L V G NP CI + G + +
Sbjct: 157 DGDHLTISSPLEGHSQNTLVYSMVGLDVGFDNPAFACIEVNYEGADESDVAYQSLKKMLT 216
Query: 852 THEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
+E+ L + K + I+ A+L+I +PEPLGG ++ + I Y
Sbjct: 217 IYELDLGKNTIVKK--SSEEIDRSANLLIQIPEPLGGVLVCSENYITY 262
>gi|444722328|gb|ELW63026.1| Splicing factor 3B subunit 3 [Tupaia chinensis]
Length = 840
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/496 (23%), Positives = 203/496 (40%), Gaps = 63/496 (12%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 11 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 65
Query: 149 R--SPDENGTYVSVME------SFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DE + S M F P+ ++V+VD E ++ C
Sbjct: 66 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVD-ELDSLSPILFCQ---------- 114
Query: 201 IRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
+ E A +LPG +W + D +++SFV T VL++ G VEE
Sbjct: 115 ------VSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSI-GETVEEVTD 167
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF T C + ++QV P I + RV+ W+ P K+I + N+ QV
Sbjct: 168 SGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTPGKKTIVKCAVNQRQV 225
Query: 320 LCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEETSSEPAKAQLAAVGL 376
+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E +++ AVGL
Sbjct: 226 VIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ-----RSRFLAVGL 280
Query: 377 WTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-----------------GHCYLL 419
D + R++SL + C +PL + +P C G YL
Sbjct: 281 -VDNTVRIISLDPSD--CLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLYLN 337
Query: 420 VALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
+ L +G + LDP +G L+D + LG++P L R V A S R + YS
Sbjct: 338 IGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQ 397
Query: 480 HKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ + ++ + +E P+ + + +T ++++ + + PL PR
Sbjct: 398 SRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPR 457
Query: 539 RIAYQESSQTFGVITT 554
+ S +I T
Sbjct: 458 KFVIHPESNNLIIIET 473
Score = 48.9 bits (115), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F ++VL N ++ Y
Sbjct: 543 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 599
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 600 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 659
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 660 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 718
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 719 DKFGNICVVRLPPNTNDEVDEDPT 742
>gi|353236335|emb|CCA68332.1| probable splicing factor 3B subunit 3 [Piriformospora indica DSM
11827]
Length = 1243
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 180/409 (44%), Gaps = 29/409 (7%)
Query: 160 VMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI- 218
+++ +L PI+ V +L T G + + R +++G+ +EE+ DLP I
Sbjct: 444 LLDELESLDPILAARVQNLP--DTSLFYTACGKGAKSTFRTLKHGLEVEENGNSDLPSIP 501
Query: 219 KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRT 278
+W L + D+ +VLSF+ T VL+ G E+EE GF S + T +
Sbjct: 502 NAVWTLKLAETDQYDSYIVLSFINGTLVLSF-GEEIEEIPNSGFLSSEPTLAAQQLGSDA 560
Query: 279 VLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEV-HGSE 336
+LQV P + S RV+ W P G +I + NK QV+ A + ++ Y E+ + +
Sbjct: 561 LLQVHPRG--IRHVLSDKRVNEWRAPIGMAIVAATTNKRQVVVALSSAELVYFELDYEGQ 618
Query: 337 IKQLAHR-ALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP------- 388
+ + R A+ V L + E + + AVG D + R++SL
Sbjct: 619 LNEFQERKAMGSTVLALSVG-----EVPEGLQRFKYLAVGC-EDQTVRIISLDPDSTLEM 672
Query: 389 -SLEEVCKEPLGGEIIPRSILMTCFEGH---CYLLVALGDGSMFYFSLDPASGRLTDKKK 444
SL+ V P I + + + H ++ + L +G + LDP +G+L D +
Sbjct: 673 ISLQAVTAPP--SSISIADMFDSSIDKHRPTTFVNIGLQNGVLLRTVLDPTNGKLADTRT 730
Query: 445 VTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYP 504
LG +P L + + V A S R + Y+ + F+ + +++ CS+NAE P
Sbjct: 731 RFLGNRPVRLVRTQVHGSPGVLALSSRSWLNYTYQGLVHFTPLAYDRLDGACSVNAELCP 790
Query: 505 DSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
D ++T + ++ KL +PL PR+ + F +I
Sbjct: 791 DGFIGIANNTLRIFQVPKLGSKLKQEILPLSYTPRKFVSHPQNSYFYLI 839
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 8/205 (3%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTAV-VHPEENEPKQGRIII 1066
IID + A L E A S+ F + V+GTAV H G + +
Sbjct: 893 IIDPVNLRSVAAFSLDNNEAAFSIAVVPFAARNGELLLVVGTAVDTHLAPRSCSTGYLRV 952
Query: 1067 FHYDDGK--LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
+ + +G L+ + + +I ++ F G+L+A + +RL++ +K LR E F
Sbjct: 953 YSFTEGGSGLELLHKTDIDEVPTALMAFQGRLIAGVGKALRLYDIGKKKLLRKAENRQFA 1012
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I + L +G IL GD+ +S+ + YK E + D + W+T+ +LD +
Sbjct: 1013 TAI-VTLSTQGSRILAGDINQSIYYVAYKAAENRLLIFADDTSARWITASTMLDYNTVVA 1071
Query: 1184 AENSYNLFICQKDSAATS--DEDRT 1206
A+ N+F+ + D A + D+D T
Sbjct: 1072 ADKFGNVFVNRLDEAVSKQVDDDPT 1096
>gi|388582014|gb|EIM22320.1| hypothetical protein WALSEDRAFT_60013 [Wallemia sebi CBS 633.66]
Length = 1208
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 180/408 (44%), Gaps = 27/408 (6%)
Query: 161 MESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-K 219
++ +LAPI+D V + Q+ T SG SLR++R+G+ + E +LP
Sbjct: 415 VDEIQSLAPILDAKVQSIYAGDTPQIYTASGVGSRSSLRVMRHGLDVIEAVSSELPAPPN 474
Query: 220 GIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTV 279
GIW L + D+ +VLSFV T VL + G +EE G + T + ++
Sbjct: 475 GIWTLKQNAQDMYDSLIVLSFVNGTLVLGI-GESIEEVSDTGLATSVSTLSVDQLGEDSM 533
Query: 280 LQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYYLEVHGSEI 337
+QV P I + RV+ W+ P+ I+ + N QV A G VY+ + ++
Sbjct: 534 IQVFPQGIRHILNDK--RVNEWKSPSDTYITASTTNSRQVCVALSNGELVYFEMDNEGQL 591
Query: 338 KQLAHR-ALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP-------- 388
+ R ++E V + I E + A+G D + R++SL
Sbjct: 592 NEFQERKSMESTVTTMSIG-----EVPQGRQRCPYLALGC-DDQTIRIVSLDPENTLEVV 645
Query: 389 SLEEVCKEPLG---GEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKV 445
S++ V +P EI+ +S + + ++ + L +G + LD +G L D +
Sbjct: 646 SVQAVTAQPSSICVAEILDKS--LDKYNPTLFVNIGLANGVLLRTVLDTVNGSLADTRTR 703
Query: 446 TLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPD 505
LG +P VL+ V A S R + Y+ ++ F+ + ++ + S NAE PD
Sbjct: 704 FLGAKPVVLRRVTVDKQQAVMALSTRTFLNYAHGDQMYFTPLLYEPLDQVSSFNAELCPD 763
Query: 506 SLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
L +D+ T+ + Q++ +V L PR+I ++ F I
Sbjct: 764 GLIGISDTVLRIFTLPNVGQRMKQDSVALSYTPRKILLHPTAPLFLTI 811
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 31/275 (11%)
Query: 958 KEPKVELLGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEI 1017
+E + ELL P E + ++ G+ + N + M ID T
Sbjct: 820 RERQAELLTSKGYNP--EEHNFDAVQFGNVRMEAGNWASCVRM---------IDPVTLTT 868
Query: 1018 LHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGK 1073
++ +L E A S ++ G + T+ V+GTA ++ P+ ++ R+ D +
Sbjct: 869 VNKVELDNNEAAFSAAFVQWAGHEDETHLVVGTAKDRMMMPQSHKEAYLRVYKVT-QDSQ 927
Query: 1074 LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALF-LKV 1132
L+ + + +I Y++ F G+LLA + +RL++ ++ LR +C + + + L V
Sbjct: 928 LELLHKTDIDDVPYAIHAFKGRLLAGVGKALRLYDLGKKRLLR-KCENKSFAAGIVNLNV 986
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI 1192
G I VGD+ S++ YK E + D W T+ +D + G + N+FI
Sbjct: 987 VGSRIYVGDMQESVSFAVYKAPENRLLVFADDIMSRWTTTATPVDYDTVAGGDKFGNIFI 1046
Query: 1193 CQKDSAATS--DEDRTHLQEVGTVHLVGDGLVQCR 1225
+ D + + DED + G GL+ R
Sbjct: 1047 TRVDKSTSEWVDEDES-----------GGGLLHAR 1070
>gi|393245024|gb|EJD52535.1| hypothetical protein AURDEDRAFT_111199 [Auricularia delicata
TFB-10046 SS5]
Length = 1214
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 131/531 (24%), Positives = 214/531 (40%), Gaps = 66/531 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G L+ + ++ ++ V K++ + + L L +G +FV S G
Sbjct: 308 FLLQSEEGDLYKVTIDHQDD-----EVTSLKIKYFDTVPVSSSLCILKSGFLFVASDFGP 362
Query: 142 SQLVKLNR---------------------SPDEN--GTYVS--------VMESFTNLAPI 170
L + + PDE Y + +S ++ PI
Sbjct: 363 HHLYQFQKLGDDDAETEFSSSSYPKNGMADPDEALPSAYFQPRLLENLLLCDSLDSINPI 422
Query: 171 IDMVVVDLER--QGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP-GI-KGIWALSI 226
ID V++L Q G S R++R+G+ +EE+ DLP GI +W I
Sbjct: 423 IDAKVLNLMPTISDTPQFYVACGRGARSSFRLLRHGLEVEENISSDLPSGIPNAVWTTKI 482
Query: 227 GSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSA 286
+ D +VLSFV T VLT+ G +EE + GF S + T + +LQV P
Sbjct: 483 RADDPFDTYIVLSFVNGTLVLTI-GETIEECQETGFLSAEPTLGVQQIGDDALLQVYPHG 541
Query: 287 AILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH-GSEIKQLAHRA 344
I + RV+ W+ P+GK+I + N QV+ A ++ Y E+ ++ + R
Sbjct: 542 IRHILADK--RVNEWKVPSGKTIVQAATNSRQVVVALNSAELVYFELDLDGQLNEYQDRK 599
Query: 345 LEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP---SLEEVCKEPLGGE 401
V + LS E + AVG D + R++SL +LE + + L
Sbjct: 600 AMGSV----VLALSMAEVPEGCQRTPYLAVGC-EDQTVRIISLDPDNTLETISLQALTAP 654
Query: 402 IIPRSILMTCF--------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTV 453
P +I + ++ + L +G LDP +G LTD + LGT+P
Sbjct: 655 --PSAICIVAMIDAAVNKISETLFVNIGLTNGLFLRTVLDPVTGELTDTRTRFLGTRPIR 712
Query: 454 LKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDS 513
L + A S R + Y+ L + + ++++ A+ PD S
Sbjct: 713 LNRVTIAGKPALLALSSRMWLNYAHQEALHLTPLIFDPLDYVSGFTADLCPDGFIGLKGS 772
Query: 514 TFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITT--RIDIQEA 561
T I +I Q+L +PL PR+IA + F + + R QEA
Sbjct: 773 TIKIFQITKIGQRLKHEVMPLSYTPRKIAVHPMNGLFYIAESDHRTHSQEA 823
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 1070 DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
DDG+ L+ + + E S+ F GKL+A I +R+++ +K LR S
Sbjct: 928 DDGRGLELLHKTECDDIPLSLLAFQGKLVAGIGKCLRIYDMGKKKLLRKAESKLFTTAIT 987
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L +G I+ GD +S+ YK E + D W TS +LD + +
Sbjct: 988 SLSTQGARIIAGDAQQSIFFCVYKAAENRLLVFADDSQQRWTTSQLMLDYNTVVAGDKFG 1047
Query: 1189 NLFI 1192
N+F+
Sbjct: 1048 NVFV 1051
Score = 40.8 bits (94), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 3 SLRIIRNGIGIEEHACIDLP-GI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
S R++R+G+ +EE+ DLP GI +W I + D +VLSFV T VLT+
Sbjct: 451 SFRLLRHGLEVEENISSDLPSGIPNAVWTTKIRADDPFDTYIVLSFVNGTLVLTI 505
>gi|426192113|gb|EKV42051.1| hypothetical protein AGABI2DRAFT_229642 [Agaricus bisporus var.
bisporus H97]
Length = 1213
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 211/506 (41%), Gaps = 64/506 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G LF + +E E++ VK K++ + + L L +G +FV S G+
Sbjct: 307 FLLQSEDGDLFKVTIEHEDE-----EVKALKIKYFDTVPVASSLCILKSGFLFVASEFGN 361
Query: 142 SQLVKLNRSPDEN-----------------------GTY--------VSVMESFTNLAPI 170
L + + D++ Y +++ + +L PI
Sbjct: 362 HYLYQFQKLGDDDEEPEFSSTSFPSSGMAEPQAALPRVYFKPRPLDNLALADELESLDPI 421
Query: 171 IDMVVVDL-ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGS 228
ID V++L Q+ G SLR +++G+ +EE DLPGI +W
Sbjct: 422 IDSKVLNLLPNSDTPQIFAACGRGARSSLRTLQHGLEVEESVSSDLPGIPNAVWTTKRNE 481
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
D+ ++LSFV T VL++ G +EE + GF S T + +LQV P
Sbjct: 482 DDPYDSYIILSFVNGTLVLSI-GETIEEVQDTGFLSSAPTLAVQQIGSDALLQVHPHG-- 538
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRAL 345
+ + RV+ W P+ K I + NK QV+ A VY+ L++ G + +A+
Sbjct: 539 IRHVLADRRVNEWRVPSNKIIVAATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAM 598
Query: 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEI 402
V L I + + AVG D + R++SL +LE + + L
Sbjct: 599 GSTVLALSIGDVPEGRQ-----RTPYLAVGC-EDQTVRIISLDPESTLETISLQALTAP- 651
Query: 403 IPRSILMTCF--------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVL 454
P +I + + ++ + L +G + LDP +G+LTD + LGT+P L
Sbjct: 652 -PSAICIADMLDASINKAQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKL 710
Query: 455 KTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST 514
+ A S R + Y+ + + F+ + +++ S +AE P+ L + S
Sbjct: 711 VRVLIHKHPAILALSSRSWLNYTYQNFMHFTPLIYENLDYAWSFSAELSPEGLIGISGSV 770
Query: 515 FTFGTIDEIQ-KLHIRTVPLGEAPRR 539
+ + KL ++PL PR+
Sbjct: 771 LRIFHVPRLGIKLKQDSIPLSYTPRK 796
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 1006 NLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT-YFVLGTAV---VHPEENEPKQ 1061
N+ IID + + L E A SL F N + V+GTA + P
Sbjct: 860 NIRIIDPVEGKTISVVPLDGNESAFSLAVVPFSAKGNELHLVVGTAADTKLSPRTCSTGF 919
Query: 1062 GRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECS 1120
R+ F D +L+ + + EI ++ F G+L+A + +R+++ +K LR +E
Sbjct: 920 LRVYKFLEDGRQLELVHKTEIDDVPLALMAFQGRLVAGVGKALRIYDIGKKKMLRKVENK 979
Query: 1121 HFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDEL 1180
F + I + L +G ILVGD+ S+ YK E + D P W+++ ++D
Sbjct: 980 QFGSAI-VTLSTQGSRILVGDMQESIFFAVYKAPENRLLIFADDSQPRWISAATMVDYNT 1038
Query: 1181 FLGAENSYNLFICQKDSAATS--DEDRT 1206
+ A+ N+F+ + D + DED T
Sbjct: 1039 VVAADRFGNIFVNRLDPRVSDQVDEDPT 1066
>gi|255588145|ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus communis]
gi|223525135|gb|EEF27867.1| spliceosomal protein sap, putative [Ricinus communis]
Length = 1214
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/518 (22%), Positives = 219/518 (42%), Gaps = 62/518 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + L+ E VKE K++ I + + + G +F S G+
Sbjct: 298 FLLQTEYGDIFKVTLDHEND-----KVKELKIKYFDTIPVTSSMCVMKLGFLFAASEFGN 352
Query: 142 SQLVK---LNRSPDENGTYVSVMES----------------------FTNLAPIIDMVVV 176
L + + D + ++ME+ +L PI+DM +
Sbjct: 353 HALYQFQAIGEEADVEASSATLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPIMDMKIA 412
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNT 235
+L + Q+ + G SLRI+R G+ I E A LPG+ +W + D
Sbjct: 413 NLFDEETPQIFSLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAY 472
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+++SF T VL++ G VEE GF + + +++QV P+ I +
Sbjct: 473 IIVSFNNATLVLSI-GETVEEVNNSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIRED-- 529
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH-GSEIKQLAHRALEYEVACLD 353
R++ W P ++I V N+ QV+ A +G ++ Y EV ++ ++ + +VACLD
Sbjct: 530 GRINEWRTPGKRTIVKVGSNRVQVVIALSGGELIYFEVDITGQLMEVEKHEMSGDVACLD 589
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMT 410
I+P+ +++ AVG + D + R+LSL + C + L + + P S+L
Sbjct: 590 IAPVPEGRQ-----RSRFLAVGSF-DNTIRILSLDP--DDCMQILSVQSVSSPPESLLFL 641
Query: 411 CFEGHC------------YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR 458
+ +L L G +F +D +G+L+D + LG + L +
Sbjct: 642 EVQASVGREDVADHPASLFLNAGLQSGVLFRTLVDMVTGQLSDSRSRFLGLRAPKLFSIL 701
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTF 517
+ S RP + Y + + ++ + S +++ + +A+A D+ F
Sbjct: 702 VRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRIF 761
Query: 518 GTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
TI+ + + + +PL PR+ Q + ++ +
Sbjct: 762 -TIERLGETFNETAIPLRYTPRKFVLQPKKKLLVIVES 798
Score = 60.1 bits (144), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 13/213 (6%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLGTAVVHPEENEPKQ- 1061
V + ++D T +L E A S+ + F + + T +GTA + PK+
Sbjct: 860 VSCIRVLDPRTAATTCLLELQDNEAAFSVCTVNFHDKEHGTLLAVGTA--KGLQFWPKRS 917
Query: 1062 ---GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR 1116
G I I+ + DDG+ L+ + + +++G ++ +F G+LLA I +RL++ ++ LR
Sbjct: 918 LSAGFIHIYKFVDDGRALELLHKTQVEGVPLALSQFQGRLLAGIGPVLRLYDLGKKRLLR 977
Query: 1117 -LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
E F N I + ++ D I VGD+ S +Y+ E + D P W+T+
Sbjct: 978 KCENKLFPNSI-VSIQTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDCVPRWLTASHH 1036
Query: 1176 LDDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
+D + GA+ N++ + +D + +ED T
Sbjct: 1037 VDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPT 1069
>gi|391341057|ref|XP_003744848.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Metaseiulus
occidentalis]
Length = 1211
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/504 (22%), Positives = 214/504 (42%), Gaps = 52/504 (10%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE ++ +V E K++ + + + + L +G +FV S G+ L ++
Sbjct: 308 GDIFKITLEFDDD-----AVTEIKLKYFDSLPVAQTMHVLKSGFLFVASEFGNHSLYQIA 362
Query: 149 RSPD--------------ENGTY---------VSVMESFTNLAPIIDMVVVDLERQGQGQ 185
D E T+ + +++ +L+PI+ V DL + Q
Sbjct: 363 HLGDNTDEPEFSSIFPLEEGDTFFFLPRELKNLVLVDEMDSLSPIMTARVADLTNEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G ++R++R+G+ + E A +LPG +W + + D +V+SF+ T
Sbjct: 423 LYAACGRGPRSTMRVLRHGLEVSEMAVSELPGNPSAVWTVKKRADDEYDAYIVVSFINAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++Q+ P I + RV+ W
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLACHQIGHDALVQIYPEGIRHIRADR--RVNEWRTS 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K I + N+ QV+ A TG ++ Y E+ S ++ + A R + +V C+ + + E
Sbjct: 540 GKKLIVKCAVNQRQVVIALTGGELIYFEMDSSGQLNEYAERKEMNSDVLCMALGSVPAGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGG--EIIPRSILMTCFEGH---- 415
+ + AVG +D + ++SL + + G E P S+ + GH
Sbjct: 600 Q-----RTKFLAVG-SSDGTVHVISLDPKSCLSILSVQGMTESNPESLAIVDMSGHEEGS 653
Query: 416 ----CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDR 471
YL + L +G + LD +G ++D + LG++ L + T V A S R
Sbjct: 654 GSSALYLNIGLQNGILKRMVLDAVTGDMSDTRTRFLGSRSVKLFKIKMQGTDAVLAMSSR 713
Query: 472 PTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIR-T 530
+ Y ++ + ++ + + +E P+ + +T ++++ + + +
Sbjct: 714 CWLSYLFQNRFHLTPLSYDSLEYASGFCSEQCPEGIVAIAGNTLRILALEKLGAVFNQLS 773
Query: 531 VPLGEAPRRIAYQESSQTFGVITT 554
PL PR + SQ VI T
Sbjct: 774 APLSFTPRSFVIDKKSQKLIVIET 797
Score = 60.1 bits (144), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 67/127 (52%), Gaps = 4/127 (3%)
Query: 1088 SMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSL 1146
+MC F ++L + +R++++ +K LR E H N+I V G+ I+VGD+ S
Sbjct: 945 AMCNFGNRVLIGVGRCLRIYDFGKKKMLRKCENKHIPNLIVTINAV-GNRIVVGDVQESF 1003
Query: 1147 TLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ--KDSAATSDED 1204
++Y+ +E + D+ P W T+ ++D +G + N++I + +++ DED
Sbjct: 1004 FFIRYRMLENQLIIFADDFTPRWTTAACMVDYRTVVGGDKFGNVYILRLPGNTSDDVDED 1063
Query: 1205 RTHLQEV 1211
T ++ +
Sbjct: 1064 PTGVRSL 1070
>gi|440636768|gb|ELR06687.1| pre-mRNA-splicing factor rse1 [Geomyces destructans 20631-21]
Length = 1212
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 127/540 (23%), Positives = 217/540 (40%), Gaps = 60/540 (11%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H +RG + G+ + +LL G LF + +E E +G T V+ K++ +
Sbjct: 297 MHKMRG--AAGAFF------FLLQSDDGDLFKITIEMIEDDNGQPTGEVRRLKIKYFDTV 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNR--SPDENGTYVS------------------ 159
I L L +G +FV S G+ Q + + D+ Y+S
Sbjct: 349 PIATSLCILKSGFLFVASEFGNHQFYQFEKLGDDDDETEYISDNFPTDPAEPYTPVYFHP 408
Query: 160 -------VMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
++ES ++ P++D V +L + Q+ + G + R +++G+ + E
Sbjct: 409 RPAENLNLVESIDSMNPLMDCKVANLTEEDAPQIYSICGTGARSTFRTLKHGLEVNEIVE 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPG+ +W + D ++L+F T VL++ G VEE GF S T
Sbjct: 469 SELPGVPSAVWTTKLTRGDEYDAYIILAFSNGTLVLSI-GETVEEVTDTGFLSSATTLAV 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I + RV+ W P +SI + N QV A +G VY+
Sbjct: 528 QQLGEDGLIQVHPKGIRHIRADR--RVNEWAAPQHRSIVAATTNAQQVAVALSSGEIVYF 585
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + R + V CL + E ++ AVG D + R+LSL
Sbjct: 586 EMDSDGSLAEYDEKREMSGTVTCLSLG-----EVPEGRVRSNFLAVGC-DDSTVRILSLD 639
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGH----CYLLVALGDGSMFYFSLDPASGRLTD 441
+LE + L SI+ YL + L G LD +G L+D
Sbjct: 640 PDSTLENKSVQALTSAPSSLSIMAMTDSSSGGSTLYLHIGLYSGVYLRTVLDEITGELSD 699
Query: 442 KKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCSLN 499
+ LG +P L T V A S RP + YS + + ++ + + +
Sbjct: 700 TRTRFLGPKPAKLFRVSVQGQTAVLALSSRPWLGYSDPVTKGFMLTPLDYAGLEWGWNFS 759
Query: 500 AESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDI 558
+E P+ + +I+++ + L ++PL PRR F VI + +I
Sbjct: 760 SEQCPEGMVGIQGQNLRIFSIEKLTENLLQHSIPLSYTPRRFVKHPEHPYFYVIQSDNNI 819
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 93/206 (45%), Gaps = 8/206 (3%)
Query: 1016 EILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDD 1071
++L L E A+S+ + F ++ + V+GT V P + + FH D
Sbjct: 870 KVLQQIDLEDNEAAVSMATVSFASQEDEVFLVVGTGKDMVASPRSSSGGFIHVYRFHEDG 929
Query: 1072 GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLK 1131
+++ I + +++ ++ F G+LL I +R+++ + LR + + + L+
Sbjct: 930 KEIEFIHKTKVEEPPLALLGFQGRLLVGIGRELRIYDLGMRQLLRKAQTEIAASLIVGLQ 989
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
+G I+V D+ S+T + YK E + D W T ++D E G + NL+
Sbjct: 990 TQGSRIIVSDVQESITFVVYKFQENKLIPFADDTIARWTTCTTMVDYETVAGGDKFGNLW 1049
Query: 1192 ICQKDSAATSDEDRTHLQEVGTVHLV 1217
+ + + A+ + D +E HLV
Sbjct: 1050 LLRCPTKASEEAD----EEGSGAHLV 1071
>gi|308505958|ref|XP_003115162.1| CRE-TEG-4 protein [Caenorhabditis remanei]
gi|308259344|gb|EFP03297.1| CRE-TEG-4 protein [Caenorhabditis remanei]
Length = 1013
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 116/507 (22%), Positives = 218/507 (42%), Gaps = 56/507 (11%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E + V E K++ + + L G +F+ + G+ +L ++
Sbjct: 309 GDIFKVTLETDEDL-----VTEMKLKYFDTVPPANAMCILKAGFLFIAAEFGNHELYQI- 362
Query: 149 RSPDENGT--YVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
S E G + S M +S +L+P+ D V+ D+ R+ Q
Sbjct: 363 ASLGEGGDDEFSSAMGFGENDAAFFEPHELRSLIPIDSMDSLSPLTDAVIGDIAREDAAQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L T G ++++RNG+ I E A DLPG +W + D+ +V+SFV T
Sbjct: 423 LYTLIGRGSRSHMKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYIVVSFVNAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI---LISTESKARVSSW 301
LT+ G VEE GF T C + +++QV + + + R++ W
Sbjct: 483 LALTI-GDTVEEASDSGFLPTTPTIGCSMIGDDSLVQVIRNQIYSEGIRHIRADKRINEW 541
Query: 302 EPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH-GSEIKQLAHRAL-EYEVACLDISPLS 358
+ P + I + N+ QV A +G ++ Y E+ + + R L ++AC+ S +S
Sbjct: 542 KVPPRRQIVKCAVNRRQVAVALSGGELVYFELDLNGTLNEFTERKLFNADIACMTFSEIS 601
Query: 359 NEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILM--TCFE 413
E +S + A+G D + R++SL + + PL + + P SIL+ T E
Sbjct: 602 EGELNS-----RFLALGT-VDNAVRIISLDPNDMLM--PLSTQNLPCPPESILLIDTPNE 653
Query: 414 -----GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFAC 468
+L + L +G +F ++D +G + D + LGT+P L + + +
Sbjct: 654 DGKGVAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQCQGRSAILCT 713
Query: 469 SDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ-KLH 527
S R ++Y + + ++ + + S + + + + ST +++ +
Sbjct: 714 SSRSWLLYHFQRRFHLTPLSYANLEYAASFCSNQCAEGIVAISASTLRIIAAEKLGVAFN 773
Query: 528 IRTVPLGEAPRRIAYQESSQTFGVITT 554
+++ PRR+A + VI T
Sbjct: 774 VQSFEHKLTPRRVAVHPTMPCLVVIET 800
>gi|393236715|gb|EJD44262.1| hypothetical protein AURDEDRAFT_137476 [Auricularia delicata
TFB-10046 SS5]
Length = 1244
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 201/501 (40%), Gaps = 61/501 (12%)
Query: 112 KVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNR---------------------S 150
K++ + + L L +G +FV S G L + +
Sbjct: 310 KIKYFDTVPVSSSLCILKSGFLFVASDFGPHHLYQFQKLGDDDAETEFSSSSYPKNGMAD 369
Query: 151 PDEN--GTYVS--------VMESFTNLAPIIDMVVVDLER--QGQGQLVTCSGGFKEGSL 198
PDE Y + +S ++ PIID V++L Q G S
Sbjct: 370 PDEALPSAYFQPRPLENLLLCDSLDSINPIIDAKVLNLMPTISDTPQFYVACGRGARSSF 429
Query: 199 RIIRNGIGIEEHACIDLP-GI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEE 256
R++R+G+ +EE+ DLP GI +W I + D +VLSFV T VLT+ G +EE
Sbjct: 430 RLLRHGLEVEENISSDLPSGIPNAVWTTKIRADDPFDTYIVLSFVNGTLVLTI-GETIEE 488
Query: 257 TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNK 316
+ GF S + T + +LQV P I + RV+ W+ P+GK+I + N
Sbjct: 489 CQETGFLSAEPTLGVQQIGDDALLQVYPHGIRHILADK--RVNEWKVPSGKTIVQAATNS 546
Query: 317 NQVLCA-TGCDVYYLEVH-GSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAV 374
QV+ A ++ Y E+ ++ + R V + LS E + AV
Sbjct: 547 RQVVVALNSAELVYFELDLDGQLNEYQDRKAMGSV----VLALSMAEVPEGRQRTPYLAV 602
Query: 375 GLWTDISARLLSLP---SLEEVCKEPLGGEIIPRSILMTCF--------EGHCYLLVALG 423
G D + R++SL +LE + + L P +I + ++ + L
Sbjct: 603 GC-EDQTVRIISLDPDNTLETISLQALTAP--PSAICIVAIIDAAVNKISETLFVNIGLT 659
Query: 424 DGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLV 483
G LDP +G LTD + LGT+P L + A S R + Y+ L
Sbjct: 660 SGLFLRTVLDPVTGELTDTRTRFLGTRPIRLNRVTIAGKPALLALSSRMWLNYAHQEALH 719
Query: 484 FSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAY 542
+ + ++++ A+ PD ST I +I Q+L +PL PR+IA
Sbjct: 720 LTPLIFDPLDYVSGFTADLCPDGFIGLKGSTIKIFQITKIGQRLKHEVMPLSYTPRKIAV 779
Query: 543 QESSQTFGVITT--RIDIQEA 561
+ F + + R QEA
Sbjct: 780 HPMNGLFYIAESDHRTHSQEA 800
Score = 47.4 bits (111), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Query: 1070 DDGK-LQQIAEKEIKGACYSMCEFNGKLL-ASINSTVRLFEWTNEKELRLECSHFNNIIA 1127
DDG+ L+ + + E S+ F G LL A I +R+++ +K LR S
Sbjct: 905 DDGRGLELLHKTECDDIPLSLLAFQGNLLVAGIGKCLRIYDMGKKKLLRKAESKLFTTAI 964
Query: 1128 LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENS 1187
L +G I+ GD +S+ YK E + D W TS +LD + +
Sbjct: 965 TSLSTQGARIIAGDAQQSIFFCVYKATENRLLVFADDSQQRWTTSQVMLDYNTVVAGDKF 1024
Query: 1188 YNLFI 1192
N+F+
Sbjct: 1025 GNVFV 1029
Score = 41.2 bits (95), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 3 SLRIIRNGIGIEEHACIDLP-GI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
S R++R+G+ +EE+ DLP GI +W I + D +VLSFV T VLT+
Sbjct: 428 SFRLLRHGLEVEENISSDLPSGIPNAVWTTKIRADDPFDTYIVLSFVNGTLVLTI 482
>gi|168031491|ref|XP_001768254.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680432|gb|EDQ66868.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1391
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 118/519 (22%), Positives = 212/519 (40%), Gaps = 99/519 (19%)
Query: 127 YLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQL 186
+ G++ V +GD Q+++ + +NG + N+API+D + D + Q Q+
Sbjct: 437 WTKGGLLAVFVEMGDGQVLQCS----DNGKLI-FKSLIQNVAPILDFSLADYHNEKQDQM 491
Query: 187 VTCSGGFKEGSLRIIRNGIGIEEHACID--LPGIKGIWALSIGSPKNLDNTLVLSFVGHT 244
CSG EGSLR+IRNGI +E+ G+ G + + + V+SFV T
Sbjct: 492 FACSGAGNEGSLRVIRNGISVEKLYTTSPIYQGVTGTYTMRMCCRDPYHAFFVMSFVQET 551
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR------- 297
RVL++ V+ TE GF T CG ++ V+QV I+ A
Sbjct: 552 RVLSVGLNFVDITEAVGFQPCASTLACGTIEDYHVVQVCSKEVIVCVPTKTAHPAGIDSP 611
Query: 298 ---VSSWEPPNGKSISVVSCNKNQVLCA---TGCDVYYLEVHGS----EIKQLAHRALEY 347
SSW+PP G +S+ + ++ A G V G+ E+ L+
Sbjct: 612 LPFCSSWKPPQGLVVSLGAVASKAIVLALSKPGLIVMLGSQRGANGALELCMTQQCELKA 671
Query: 348 EVACLDI--------SPL--------SNEETSSEPAKAQLAAVGL--WTDISARLLSLPS 389
E++C+ I SPL S P+ ++ + + + S +LS+
Sbjct: 672 ELSCISIPDEEDWTSSPLPPSIVGLVEGTPKSRNPSGVEVGRICVVGTHEPSVEVLSIVP 731
Query: 390 LEEVCKEPLG------------GEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437
E + +G +P S+ + F+ Y+L L +G + + PAS
Sbjct: 732 GEGLAPLAVGHISLVSCVGTTLSGCVPESVRLAQFD-RLYILAGLRNGMLLRYEW-PASS 789
Query: 438 RLT-----------DKKKVTLGTQPTV----------------LKTFRSLSTTNV----- 465
T D + + + TQP + L R + + V
Sbjct: 790 TATLPDCTNLLSTSDWENIGI-TQPNLGGDKDVLEDSSPVLLHLVAVRRMGVSPVSLISL 848
Query: 466 --------FACSDRPTVIYSSNH--KLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTF 515
A SDRP ++ ++ H ++ ++++ +H +N+ P+ + D +
Sbjct: 849 QASLSADVIALSDRPWLLQTARHSQRIAHTSISFPSSSHAAPVNSVDCPNGILFVADCSL 908
Query: 516 TFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
++ +++L+++ +PLG PRR+ Y S+T V+ T
Sbjct: 909 HLVEMEHLKRLNVQKLPLGRTPRRVLYHTESKTLIVMRT 947
>gi|401883281|gb|EJT47496.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 2479]
Length = 1216
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 123/513 (23%), Positives = 210/513 (40%), Gaps = 54/513 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G LF +E E + V+ +++ + + L L +G +FV S GD
Sbjct: 311 FLLQSEDGDLFKATIEHEGE-----DVRALRIKYFDTVPVATSLCILKSGYLFVASEFGD 365
Query: 142 SQLVKLNRSPDENGTY-----------------------------VSVMESFTNLAPIID 172
L + D++G + + ++ ++L PI+D
Sbjct: 366 QGLYQFQSLADDDGEREWSSTDYPGFGLGEEHLPYAFFQPRPLQNLLLADTLSSLDPILD 425
Query: 173 MVVVDL--ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSP 229
VV+L Q+ G + R +++G+ I LPG+ +W L +
Sbjct: 426 AQVVNLLGNASDTPQIYAACGRGPRSTFRSLKHGLDINVLVESPLPGVPNAVWTLKLSED 485
Query: 230 KNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAIL 289
D+ +VLSF T VL++ G +EE GF S T + +LQV P+ L
Sbjct: 486 DEYDSYIVLSFPNGTLVLSI-GETIEEVNDTGFLSSGPTLAVQQLGSAGLLQVHPAG--L 542
Query: 290 ISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRALE 346
+ RV W P G +I + NKNQV+ A VY+ L+ GS + ++L
Sbjct: 543 RHIRAADRVDEWNAPAGTTIVSATTNKNQVVIALSTQELVYFELDEEGSLNEYQERKSLP 602
Query: 347 YEVACLDISPLSNEETSSEPAKA------QLAAVGLWTDISARLLSLPSLEEVCKEPLGG 400
C+ I+ + E P A + + L D + LSL +L +
Sbjct: 603 GNATCVSIADVP-EGRRRTPYLAVGCDNQTVHIISLEPDNTLETLSLQALTAPPSDICLA 661
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
EI SI +L + L +G + +DP G L+D + LG++P +
Sbjct: 662 EIFDTSIDKN--RATMFLTIGLLNGVLLRTVVDPVDGSLSDTRLRFLGSKPPRIVRSAVH 719
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTI 520
+ V A S R ++Y+ L + + + C+L+A PD L + +T TI
Sbjct: 720 GSPAVMAFSSRTWLLYTYQDLLQTQPLIYDMLEYACNLSAAMCPDGLIGISGNTLRIFTI 779
Query: 521 DEI-QKLHIRTVPLGEAPRR-IAYQESSQTFGV 551
+ KL ++PL PR+ ++Y ++ +G+
Sbjct: 780 PRLGTKLKQDSMPLSYTPRKFVSYPYNTVFYGI 812
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 15/194 (7%)
Query: 1009 IID--QNTFEILHAHQLFPGEYALSLISSKF---GEDPNTYFVLGTAV---VHPEENEPK 1060
+ID QNT L +L E A SL F G +P+ V+GT V + P+ +
Sbjct: 866 VIDPLQNT--TLQTLELDEDEAAFSLAVCYFERMGGEPS--LVVGTGVKTTLMPKGCKEG 921
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LEC 1119
R+ + +L+ + + + ++ F G LLA + ++RL+E + LR E
Sbjct: 922 WLRVYAIRDEGKRLEFMHKTKTDDVPLAVAAFQGYLLAGVGKSLRLYEMGKKALLRKCEN 981
Query: 1120 SHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEI-SRDYNPNWMTSIEILDD 1178
+ F +A + V G I+VGDL S Y+++ I + D P ++T++ +D
Sbjct: 982 NGFPTGVAT-INVVGARIIVGDLQESTFYCVYRSIPSRQLLIFADDSQPRFLTAVCNVDY 1040
Query: 1179 ELFLGAENSYNLFI 1192
+ A+ N+F+
Sbjct: 1041 DTVCCADKFGNIFV 1054
>gi|384490247|gb|EIE81469.1| hypothetical protein RO3G_06174 [Rhizopus delemar RA 99-880]
Length = 1197
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 188/429 (43%), Gaps = 30/429 (6%)
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
G LV P +N + V +ES +AP+++ V++L + ++ G + + R
Sbjct: 372 GGIPLVYFKPRPLKNLSLVDELES---MAPLMESKVLNLADEETPRIYAICGRGAQSTFR 428
Query: 200 IIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
I+ G+ E A +LPG +W + + +V+SF T VL++ G VEE
Sbjct: 429 ILNQGVEAAELAVSELPGNPSAVWTTKLRADDQYHAYIVVSFANATLVLSI-GETVEEVT 487
Query: 259 MGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
GF ++ T + ++QV P I + RV+ W P G++I + N Q
Sbjct: 488 DTGFLTNAPTLAVQQIGEDALVQVHPHGIRHIRADR--RVNEWRAPQGQTIVEAATNSRQ 545
Query: 319 VLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVG 375
+ A + ++ Y E+ G + HR + + L + E +A+ AVG
Sbjct: 546 IAIALSNGEIVYFEMDNMGQLNEHQEHRQMSAYITTLALG-----EVPEGRVRARYIAVG 600
Query: 376 LWTDISARLLSLPSLEEVCKEPLGGEI---IPRSILMTCF------EGHC--YLLVALGD 424
D + R+LSL + C EP+ + +P S+ + +GH YL + L +
Sbjct: 601 C-EDQTVRILSLDP--DSCLEPISMQALQGVPSSLCIIEMMDTGIEQGHGTQYLNIGLSN 657
Query: 425 GSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVF 484
G LD +G+L+D + +G + L V A S +P V Y+ ++L
Sbjct: 658 GIFLRTILDTITGQLSDTRARFIGAKSVKLFRISIQGHPAVLALSTKPWVSYTFQNRLYL 717
Query: 485 SNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIR-TVPLGEAPRRIAYQ 543
+ ++ + H + E P+ + +T T++++ + + ++PL PR+ A
Sbjct: 718 TPLSYEMLEHGSAFVTEQCPEGVVAVAGNTLRIFTVEKLGNIFNQVSIPLKYTPRKFALH 777
Query: 544 ESSQTFGVI 552
++TF VI
Sbjct: 778 APTRTFVVI 786
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 4/137 (2%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLK 1131
+L I + I Y+M F G+LL ++R+++ +K LR E N I + L
Sbjct: 916 RLHFIHKTPIDDVPYAMLAFQGRLLVGAGKSLRIYDIGKKKMLRKCETKSIPNCI-VSLH 974
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
+G ++ D+ S+ + YK + + D P WMT ++D E G + N F
Sbjct: 975 TQGHRVIATDVQESVHYVIYKHADNRLVVFADDTIPRWMTGSTMVDYETVAGGDKFGNFF 1034
Query: 1192 ICQKDSAATS--DEDRT 1206
+ + + + DED T
Sbjct: 1035 VSRLPGSISREVDEDTT 1051
>gi|406698009|gb|EKD01256.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 8904]
Length = 1216
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 210/513 (40%), Gaps = 54/513 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G LF +E E + V+ +++ + + L L +G +FV S GD
Sbjct: 311 FLLQSEDGDLFKATIEHEGE-----DVRALRIKYFDTVPVATSLCILKSGYLFVASEFGD 365
Query: 142 SQLVKLNRSPDENGTY-----------------------------VSVMESFTNLAPIID 172
L + D++G + + ++ ++L PI+D
Sbjct: 366 QGLYQFQSLADDDGEREWSSTDYPGFGLGEEHLPYAFFQPRPLQNLLLADTLSSLDPILD 425
Query: 173 MVVVDL--ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSP 229
VV+L Q+ G + R +++G+ + LPG+ +W L +
Sbjct: 426 AQVVNLLGNASDTPQIYAACGRGPRSTFRSLKHGLDVNVLVESPLPGVPNAVWTLKLSED 485
Query: 230 KNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAIL 289
D+ +VLSF T VL++ G +EE GF S T + +LQV P+ L
Sbjct: 486 DEYDSYIVLSFPNGTLVLSI-GETIEEVNDTGFLSSGPTLAVQQLGSAGLLQVHPAG--L 542
Query: 290 ISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRALE 346
+ RV W P G +I + NKNQV+ A VY+ L+ GS + ++L
Sbjct: 543 RHIRAADRVDEWNAPAGTTIVSATTNKNQVVIALSTQELVYFELDEEGSLNEYQERKSLP 602
Query: 347 YEVACLDISPLSNEETSSEPAKA------QLAAVGLWTDISARLLSLPSLEEVCKEPLGG 400
C+ I+ + E P A + + L D + LSL +L +
Sbjct: 603 GNATCVSIADVP-EGRRRTPYLAVGCDNQTVHIISLEPDNTLETLSLQALTAPPSDICLA 661
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
EI SI +L + L +G + +DP G L+D + LG++P +
Sbjct: 662 EIFDTSIDKN--RATMFLTIGLLNGVLLRTVVDPVDGSLSDTRLRFLGSKPPRIVRSAVH 719
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTI 520
+ V A S R ++Y+ L + + + C+L+A PD L + +T TI
Sbjct: 720 GSPAVMAFSSRTWLLYTYQDLLQTQPLIYDMLEYACNLSAAMCPDGLIGISGNTLRIFTI 779
Query: 521 DEI-QKLHIRTVPLGEAPRR-IAYQESSQTFGV 551
+ KL ++PL PR+ ++Y ++ +G+
Sbjct: 780 PRLGTKLKQDSMPLSYTPRKFVSYPYNTVFYGI 812
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 15/194 (7%)
Query: 1009 IID--QNTFEILHAHQLFPGEYALSLISSKF---GEDPNTYFVLGTAV---VHPEENEPK 1060
+ID QNT L +L E A SL F G +P+ V+GT V + P+ +
Sbjct: 866 VIDPLQNT--TLQTLELDEDEAAFSLAVCYFERMGGEPS--LVVGTGVKTTLMPKGCKEG 921
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LEC 1119
R+ + +L+ + + + ++ F G LLA + ++RL+E + LR E
Sbjct: 922 WLRVYAIRDEGKRLEFMHKTKTDDVPLAVAAFQGYLLAGVGKSLRLYEMGKKALLRKCEN 981
Query: 1120 SHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEI-SRDYNPNWMTSIEILDD 1178
+ F +A + V G I+VGDL S Y+++ I + D P ++T++ +D
Sbjct: 982 NGFPTGVAT-INVVGARIIVGDLQESTFYCVYRSIPSRQLLIFADDSQPRFLTAVCNVDY 1040
Query: 1179 ELFLGAENSYNLFI 1192
+ A+ N+F+
Sbjct: 1041 DTVCCADKFGNIFV 1054
>gi|380490733|emb|CCF35810.1| pre-mRNA-splicing factor rse-1 [Colletotrichum higginsianum]
Length = 1212
Score = 109 bits (273), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 130/549 (23%), Positives = 222/549 (40%), Gaps = 72/549 (13%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF L+ E DG T VK K++ I
Sbjct: 297 MHKLKG--SAGAFF------FLLQTEDGDLFKATLDMVEDTDGNPTGEVKRLKIKYFDTI 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN-------------------GTY--- 157
+ L L +G ++ S+ G+ Q + + D++ Y
Sbjct: 349 PVSSSLCILKSGFLYAASQFGNHQFYQFEKLGDDDDELEFSSDDFPTDPKAGYDAVYFHP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
++++ES ++ P++D V +L + Q+ T G + R++++G+ + E
Sbjct: 409 RPLENLALVESIDSMNPLLDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPGI +W L + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGIPSAVWTLKLNRGDQYDAYIVLSFTNGTLVLSI-GETVEEVSDSGFLTSVPTLAA 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I V+ W P +SI + N++QV A +G VY+
Sbjct: 528 QLLGEDGLIQVHPKG---IRHIRHGHVNEWAAPQHRSIVAATTNEHQVAVALSSGEIVYF 584
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V CL + E ++ AVG D + R+LSL
Sbjct: 585 EMDGDGSLAEYDEKKEMFGTVTCLSLG-----EVPEGRLRSSFLAVGC-DDSTVRVLSLD 638
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRL 439
+LE + L P S+ + + YL + L G LD +G L
Sbjct: 639 PESTLESKSVQALTAP--PSSLAIIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEITGEL 696
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCS 497
TD ++ LG +P L T V S RP + YS + + +N + + +
Sbjct: 697 TDTRQKFLGPKPVRLFQVTVQGRTCVIGLSSRPWLGYSDPITRGFLVTPLNYVDLEWVWN 756
Query: 498 LNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITTRI 556
++E + + + I+ + + +++PL PRR+ F I
Sbjct: 757 FSSEQCEEGVVGIQGQSLRIFAIENLGDTITQKSIPLSYTPRRLLKHPEHPMFYTI---- 812
Query: 557 DIQEADGST 565
EAD +T
Sbjct: 813 ---EADNNT 818
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 8/205 (3%)
Query: 1017 ILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDG 1072
+L L E A+S F +D ++ ++GT +V+P + + F D
Sbjct: 871 VLQTVDLDNNEAAVSAAIVSFASQDNESFLIVGTGKDMIVNPRQFSEGYIHVYRFSEDGH 930
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
+L+ I + +++ ++ F G+LLA I T+R+++ + LR + + + L
Sbjct: 931 ELEFIHKTKVEEPPSALLGFQGRLLAGIGQTLRIYDLGLRQMLRKAQADVAPQLIVSLST 990
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI 1192
+G I+VGD+ +T + YK D W+T ++D E +G + N+F+
Sbjct: 991 QGSRIIVGDVQHGITYVVYKPTTNKLIPFVDDTISRWVTCTTMVDYESVVGGDKFGNIFL 1050
Query: 1193 CQKDSAATSDEDRTHLQEVGTVHLV 1217
+ A+ + D +E G +HL+
Sbjct: 1051 VRCPEKASQEAD----EESGGLHLL 1071
>gi|429859776|gb|ELA34542.1| pre-mRNA-splicing factor rse1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1212
Score = 109 bits (273), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 122/524 (23%), Positives = 217/524 (41%), Gaps = 65/524 (12%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF +++ E DG T VK K++ +
Sbjct: 297 MHKLKG--SAGAFF------FLLQTEDGDLFKAVIDMVEDADGNPTGEVKRLKIKYFDTV 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN-------------------GTY--- 157
+ L L +G ++ S+ G+ Q + + D++ Y
Sbjct: 349 PVSSSLCILKSGFLYAASQFGNHQFYQFEKLGDDDEEKEFSSDDFPADPKAGYDAVYFYP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
++++ES ++ P++D V +L + Q+ T G + R++++G+ + E
Sbjct: 409 RPLENLALVESIDSMNPLLDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPGI +W L + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGIPSAVWTLKLSRGDQYDAYIVLSFTNGTLVLSI-GETVEEVSDSGFLTSVPTLAA 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I +++ W P +SI + N++QV A +G VY+
Sbjct: 528 QLLGEDGLIQVHPKG---IRHIRHGQINEWAAPQHRSIVAATTNEHQVAVALSSGEIVYF 584
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V CL + E ++ AVG D + R+LSL
Sbjct: 585 EMDGDGSLAEYDEKKEMFGTVTCLSLG-----EVPEGRLRSSFLAVGC-DDSTVRVLSLD 638
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRL 439
+LE + L P S+ + + YL + L G LD +G L
Sbjct: 639 PDSTLESKSVQALTAP--PSSLAIIAMDDSSSGGSALYLHIGLHSGVYLRTVLDEVTGEL 696
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCS 497
TD ++ LG +P L T V S RP + YS V + +N + + +
Sbjct: 697 TDTRQKFLGPKPVRLFQVTVQGRTCVIGLSSRPWLGYSDPITRGFVVTPLNYVDLEWVWN 756
Query: 498 LNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRI 540
++E + + + I+ + + +++PL PRR+
Sbjct: 757 FSSEQCEEGVVGIQGQSLRIFAIENLGDTITQKSIPLTYTPRRL 800
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 6/203 (2%)
Query: 1017 ILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDG 1072
+L L E A+S F +D + ++GT +V+P + + F D
Sbjct: 871 VLQTVDLDDNEAAVSAAIVSFASQDNENFLIVGTGKDMIVNPRQFTEGYIHVYRFGEDGH 930
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
+L+ I + +++ ++ F G+LLA + T+R+++ + LR + + + L
Sbjct: 931 ELEFIHKTKVEEPPTALLAFQGRLLAGVGKTLRIYDLGLRQMLRKSQADVAPQLIVSLST 990
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI 1192
+G I+VGD+ +T + YK D W+T ++D E G + N+F+
Sbjct: 991 QGSRIVVGDVQHGVTYVVYKPTTNKLIPFVDDTIARWVTCTTMVDYESVAGGDKFGNMFL 1050
Query: 1193 --CQKDSAATSDEDRTHLQEVGT 1213
C + ++ +DE++ L + T
Sbjct: 1051 VRCPEKASQEADEEQAGLHLLNT 1073
>gi|303285956|ref|XP_003062268.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456679|gb|EEH53980.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1213
Score = 109 bits (273), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 168/371 (45%), Gaps = 19/371 (5%)
Query: 161 MESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IK 219
++ +L P++D +L + Q+ G +LR++R G+ + E A LPG
Sbjct: 399 IDEIESLCPVLDAQCHNLTSEETPQVYALCGAGSRSTLRVLRQGVALSEMAVSPLPGNPN 458
Query: 220 GIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTV 279
++ + D +V+SFV T VL++ G VEE GF T + ++
Sbjct: 459 AVFTVKKNIADEFDAYIVVSFVNATLVLSI-GETVEEVSDSGFLGTTPTLSASLLGDDSL 517
Query: 280 LQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EI 337
LQ P L + R++ W P K+I+ V+CN QV+ A +G ++ Y E+ + ++
Sbjct: 518 LQAHPGG--LRHVRADKRINEWRCPGRKTITRVACNNRQVVIALSGGEIIYFELDSTGQL 575
Query: 338 KQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEP 397
++ +VACL + P+ + + AVG + D + R+LSL + + C +
Sbjct: 576 MEIEKLETNGDVACLHVGPVPEGSL-----RNRFLAVGSF-DSTVRVLSLSA--DDCLQT 627
Query: 398 LGGEII---PRSILM-TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTV 453
+G + + P S+LM EG YL V L +G + +D +G+L+D + LG +P
Sbjct: 628 MGVQALAAAPCSLLMLQTREGGLYLNVGLANGVLLRAEVDRVTGQLSDTRARFLGARPPK 687
Query: 454 LKTFRSLSTTNVFACSDRPTVIYSS-NHKLVFSNVNLRQVNHMCSLNAESYPDSLALATD 512
L + A S RP + + + + ++ + H ++ P+ +
Sbjct: 688 LHGATVRGQPAMLALSSRPWLGHVDLQRRFALAPLSYEALEHAADFTSDQCPEGVVAVAG 747
Query: 513 STFTFGTIDEI 523
ST +++ +
Sbjct: 748 STLRIVSVERL 758
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 1027 EYALSLISSKFGEDPNTYFVLGTAV---VHPEENEPKQGRIIIFHY-DDGKLQQIAEKEI 1082
E AL F + +GTAV P + + G + ++ Y +DG + + + +
Sbjct: 887 EAALCACHVYFPVANEVFLAVGTAVGLTFAPRDCD--GGFVHLYRYLEDGTVTLVHKTPL 944
Query: 1083 KGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGD 1141
G +MC F G+LL + +RL+++ +K LR +E +F N I + GD I VGD
Sbjct: 945 DGVPGAMCGFKGRLLLGCGNALRLYDFGKKKLLRKVENRNFPNFITT-VHASGDRIYVGD 1003
Query: 1142 LMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ--KDSAA 1199
+ S ++YK + S ++ D P +T+ LD + GA+ N+F+ + +D +A
Sbjct: 1004 VQESFHFVKYKREDLSLIIVADDVQPRHITAALPLDYDTMAGADKFGNVFVARLAQDVSA 1063
Query: 1200 TSDEDRT 1206
+ED T
Sbjct: 1064 DIEEDPT 1070
>gi|302831461|ref|XP_002947296.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f.
nagariensis]
gi|300267703|gb|EFJ51886.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f.
nagariensis]
Length = 1221
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 173/408 (42%), Gaps = 38/408 (9%)
Query: 160 VMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK 219
+++ +L PI DM V +L + Q+ G SL ++R G+ + E A LPG
Sbjct: 396 LIDEMASLMPITDMKVANLLNEEIPQIYALCGHGPRASLSVLRPGLAVTELAVSPLPGAP 455
Query: 220 -GIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRT 278
+W + + D +V+SF T V ++ G EV+ET GF T + + +
Sbjct: 456 TAVWTVRRNATDEFDAFIVVSFANATLVFSI-GEEVKETNESGFLGTVPTLHTQLLADNS 514
Query: 279 VLQVT----------PSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATG---C 325
+LQ T P L + R++ W+ P ++I + N+ QV A
Sbjct: 515 MLQATFFDLSEPQVYPGG--LRHIKPDRRINEWKVPGRRNIKAAASNEKQVAIALQGGEV 572
Query: 326 DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLL 385
V+ LEV + + R L +V+CL+I P+ S AVG + D + R+L
Sbjct: 573 TVFELEVGTGLLVEAEKRDLGEDVSCLEIPPVPEGLVRS-----SFLAVGTY-DQTVRVL 626
Query: 386 SL---PSLEEVCKEPLGGEIIPRSILM---------TCFEGHCYLLVALGDGSMFYFSLD 433
SL L+ + + L +P SILM EG +L V L +G + +D
Sbjct: 627 SLDPGQGLKNLSMQALNS--VPESILMLYNTGPGTERATEGGLFLHVGLQNGILIRSEVD 684
Query: 434 PASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVN 493
SG+LTD + LGT+P L + A S RP + Y+ + S ++ ++
Sbjct: 685 RISGQLTDSRTRFLGTKPPKLFAAAVRGNRCMLALSSRPWLGYNDQGRFNLSPLSYEALD 744
Query: 494 HMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRI 540
+ ++ P+ ST ++ + + + L PRR+
Sbjct: 745 YASGFASDQCPEGFVAVVKSTLRILAVENVGDAFNTQACRLRYTPRRL 792
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 1070 DDGKLQQIAEKEI--KGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNII- 1126
D GK ++ K I G ++C F G+LLA + T+RL++ +K LR +C +N +
Sbjct: 936 DGGKRLELVHKTIVDGGVPGALCGFKGRLLAGVGPTLRLYDMGKKKLLR-KC-EYNRLPH 993
Query: 1127 -ALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAE 1185
+ + V+G I VGD S+ +++YK + +F + D P ++T+I LD + +
Sbjct: 994 QIMNITVQGPRIYVGDAQESVHMMRYKKADNAFYIFADDIAPRYLTTILPLDYDTLAAGD 1053
Query: 1186 NSYNLFICQ--KDSAATSDEDRT 1206
N + + ++++ ++D T
Sbjct: 1054 KFGNFVVLRLPREASQQVEDDPT 1076
>gi|156051126|ref|XP_001591524.1| hypothetical protein SS1G_06970 [Sclerotinia sclerotiorum 1980]
gi|154704748|gb|EDO04487.1| hypothetical protein SS1G_06970 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1147
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 122/514 (23%), Positives = 209/514 (40%), Gaps = 52/514 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + +E E +G T VK K++ + + L L +G +FV S
Sbjct: 309 FLLQTDDGDLFKITIEMVEDDNGQPTGEVKRLKIKYFDTVPVAASLCILKSGFLFVASEF 368
Query: 140 GDSQLVKLNRSPDE---------------NGTY------------VSVMESFTNLAPIID 172
G+ Q + + D+ N +Y +S++ES ++ P++D
Sbjct: 369 GNHQFYQFEKLGDDDEEIEFVSDDFPTGTNESYTPVYFHPRPAENLSLVESIDSMNPLMD 428
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
V +L + Q+ + G + R +++G+ + E +LPG+ +W +
Sbjct: 429 CKVANLTDEDAPQIYSICGTGARSTFRTLKHGLEVSEIVESELPGVPSAVWTTKLTRNDV 488
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 489 YDAYIILSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIR 547
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + + +
Sbjct: 548 ADR--RVNEWAAPQHRSIVAATTNERQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMSGT 605
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E ++Q AVG D + R+LSL +LE + L
Sbjct: 606 VTCLSLG-----EVPEGRQRSQFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSPPNAL 659
Query: 406 SILMTCFEGH----CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ YL + L G LD +G L+D + LG +P L
Sbjct: 660 SIMAMSDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPVKLFRVSVQG 719
Query: 462 TTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
T V A S RP + YS + + ++ + + ++E + + +
Sbjct: 720 QTAVLALSSRPWLGYSDPVTKGFMLTPLDYPALEWGWNFSSEQCTEGMVGIQGQNLRIFS 779
Query: 520 IDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
I+++ L ++PL PRR F V+
Sbjct: 780 IEKLTNNLLQESIPLTYTPRRFVRHPEHPLFYVV 813
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 1039 EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGK 1095
++ T+ V+GT VV P + + FH D +L+ I + +++ ++ F G+
Sbjct: 894 QEDETFLVVGTGKDLVVSPRSSSAGFIHVYRFHEDGKELEFIHKTKVEEPPMALLAFQGR 953
Query: 1096 LLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTME 1155
LLA + +R+++ + LR S + + L+ +G I+V D+ S+T++ YK E
Sbjct: 954 LLAGVGKDLRIYDLGMRQLLRKAQSEIAPNMIVGLQTQGSRIIVSDVQESITMVVYKFQE 1013
Query: 1156 GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAATSDED 1204
D W + ++D E G + NL++ C ++ +DE+
Sbjct: 1014 NRLIPFVDDTIARWTSCTTMVDYETVAGGDKFGNLWLLRCPPKASEEADEE 1064
>gi|323454388|gb|EGB10258.1| hypothetical protein AURANDRAFT_23619 [Aureococcus anophagefferens]
Length = 1212
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 165/379 (43%), Gaps = 17/379 (4%)
Query: 170 IIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGS 228
I D+ DL + Q+ G SLR++R+G+ + E A +LPG +W +
Sbjct: 415 ITDVYCGDLAGEEAPQVYALCGKGHRSSLRVLRHGVAVSEMAVSELPGRPSAVWTVRGRH 474
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
+ D +V+SF T VL++ G VEE GF + T + +LQV
Sbjct: 475 DEPYDKYIVVSFTNATLVLSI-GETVEEVTDSGFLATAPTLDVALLADNALLQVHGEG-- 531
Query: 289 LISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALE 346
+ R+S W+ P K+I + N+ QV A G +V Y E+ S + +L + L
Sbjct: 532 IRHVRGDLRISEWKTPGRKAIEKAAANERQVAAALAGGEVIYFELDASGALAELGTKELG 591
Query: 347 YEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS---LEEVCKEPLGGEII 403
EVACLD+ + A+A A+G W D S RLLSL L +V LG
Sbjct: 592 VEVACLDVGVVPAGR-----ARAPFLALGGW-DGSLRLLSLAPDELLVQVATMQLGARAE 645
Query: 404 PRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTT 463
T +G + L +G + ++D ++G+L D + LG++ L
Sbjct: 646 SVRFCETP-DGRLGVAAGLANGVLQRAAVDASTGQLGDARARFLGSRAVRLFRVDVGGAP 704
Query: 464 NVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI 523
+ A S R + Y+ +L + ++ + H +E P+ + ST D++
Sbjct: 705 GLLALSSRAWLCYAHAGRLETAPLSYDALEHAAGFKSEQCPEGVVAIAGSTLRIFVPDKL 764
Query: 524 -QKLHIRTVPLGEAPRRIA 541
+ + +PL PRR+A
Sbjct: 765 GETFNQSALPLRYTPRRLA 783
Score = 46.2 bits (108), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 6/170 (3%)
Query: 1029 ALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKG 1084
ALS + F G + +GTA HP +E + ++ + +L + E+
Sbjct: 889 ALSCATVSFAGRGGEVFVAVGTARSLTFHPRAHEGCY--VHVYRLLESRLVLLHRTEVDD 946
Query: 1085 ACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMR 1144
+ EF G+LL ++ +T+R+++ K LR + + ++V GD I V D
Sbjct: 947 VPLGLAEFRGRLLVAVGATLRMYDLGKRKLLRKTEAALAPTLITKVEVVGDRIFVADAAM 1006
Query: 1145 SLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ 1194
S+ L +Y + D +T+ LD + A+ N+ + +
Sbjct: 1007 SVHLARYVRDRNRLAVFADDPVGRCVTAFAPLDYDTVAVADKFGNVAVLR 1056
>gi|347829304|emb|CCD45001.1| similar to pre-mRNA-splicing factor rse1 [Botryotinia fuckeliana]
Length = 1212
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 122/514 (23%), Positives = 207/514 (40%), Gaps = 52/514 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + +E E +G T V+ K++ + + L L +G +FV S
Sbjct: 309 FLLQTDDGDLFKITIEMVEDDNGQPTGEVRRLKIKYFDTVPVATSLCILKSGFLFVASEF 368
Query: 140 GDSQLVKLNR--SPDENGTYVS-------------------------VMESFTNLAPIID 172
G+ Q + + DE +VS ++ES ++ P++D
Sbjct: 369 GNHQFYQFEKLGDDDEETEFVSDDFPTGAHESYTPIYFHPRPAENLSLVESIDSMNPLMD 428
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
V +L + Q+ + G + R +++G+ + E +LPG+ +W +
Sbjct: 429 CKVANLTDEDAPQIYSICGTGARSTFRTLKHGLEVSEIVESELPGVPSAVWTTKLTRGDT 488
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 489 YDAYIILSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIR 547
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + + +
Sbjct: 548 ADH--RVNEWAAPQHRSIVAATTNERQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMSGT 605
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E ++Q AVG D + R+LSL +LE + L
Sbjct: 606 VTCLSLG-----EVPEGRQRSQFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSPPNAL 659
Query: 406 SILMTCFEGH----CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ YL + L G LD +G L+D + LG +P L
Sbjct: 660 SIMAMSDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPVKLFRVAVQG 719
Query: 462 TTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
T V A S RP + YS + + ++ + + ++E + + +
Sbjct: 720 QTAVLALSSRPWLGYSDPVTKGFMLTPLDYPALEWGWNFSSEQCTEGMVGIQGQNLRIFS 779
Query: 520 IDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
I+++ L ++PL PRR F VI
Sbjct: 780 IEKLTDNLLQESIPLTYTPRRFVRHPEHACFYVI 813
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 4/193 (2%)
Query: 1016 EILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDD 1071
++L L E A+S+ F ++ T+ +GT VV P + FH D
Sbjct: 870 KVLSTIHLEDNECAVSIAVVAFASQEDETFLCVGTGKDMVVSPRSFSAGFIHVYRFHEDG 929
Query: 1072 GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLK 1131
+L+ I + +++ ++ F G+LLA + +R+++ + LR S + + L+
Sbjct: 930 KELEFIHKTKVEEPPMALLAFQGRLLAGVGKDLRIYDLGMRQLLRKAQSEVAPNMIVGLQ 989
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
+G I+V D+ S+T++ YK E D W + ++D E G + NL+
Sbjct: 990 TQGSRIIVSDVQESITMVVYKFQENRLIPFVDDTIARWTSCTTMVDYETVAGGDKFGNLW 1049
Query: 1192 ICQKDSAATSDED 1204
+ + + A+ + D
Sbjct: 1050 LLRCPAKASEEAD 1062
>gi|310793065|gb|EFQ28526.1| CPSF A subunit region [Glomerella graminicola M1.001]
Length = 1212
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 128/549 (23%), Positives = 224/549 (40%), Gaps = 72/549 (13%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +L+ G LF ++ E DG T VK K++ I
Sbjct: 297 MHKLKG--SAGAFF------FLIQTEDGDLFKATIDMVEDADGNPTGEVKRLKIKYFDTI 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN-------------------GTY--- 157
+ L L +G ++ S+ G+ Q + + D++ Y
Sbjct: 349 PVSSSLCILKSGFLYAASQFGNHQFYQFEKLGDDDEELEFSSDDFPTDPKAGYDAVYFHP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
++++ES ++ P++D V +L + Q+ T G + R++++G+ + E
Sbjct: 409 RPLENLALVESIDSMNPLLDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPGI +W L + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGIPSAVWTLKLNRGDQYDAYIVLSFTNGTLVLSI-GETVEEVSDSGFLTSVPTLAA 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I + +V+ W P +SI + N++QV A +G VY+
Sbjct: 528 QLLGEDGLIQVHPKG---IRHIRQGQVNEWAAPQHRSIVAATTNEHQVAVALSSGEIVYF 584
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V CL + E ++ AVG D + R+LSL
Sbjct: 585 EMDGDGSLAEYDEKKEMFGTVTCLSLG-----EVPEGRLRSSFLAVGC-DDSTVRVLSLD 638
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRL 439
+LE + L P S+ + + YL + L G LD +G L
Sbjct: 639 PESTLESKSVQALTAP--PSSLAIIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGEL 696
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCS 497
TD ++ LG +P L T V S RP + YS + + +N + + +
Sbjct: 697 TDTRQKFLGPKPVRLFQVTVQGRTCVIGLSSRPWLGYSDPITRGFLVTPLNYVDLEWVWN 756
Query: 498 LNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITTRI 556
++E + + + I+ + + +++PL PRR+ F I
Sbjct: 757 FSSEQCEEGVVGIQGQSLRIFAIENLGDTITQKSIPLSYTPRRLLKHPEYPMFYTI---- 812
Query: 557 DIQEADGST 565
EAD +T
Sbjct: 813 ---EADNNT 818
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 1017 ILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDG 1072
+L L E A+S F +D ++ ++GT VV+P + + F D
Sbjct: 871 VLQTIDLDNNEAAVSAAIVSFASQDSESFLIVGTGKDMVVNPRQFSEGYIHVYRFGEDGH 930
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
+L+ I + +++ ++ F G+LLA I T+R+++ + LR + + + L
Sbjct: 931 ELEFIHKTKVEEPPSALLGFQGRLLAGIGKTLRIYDLGLRQMLRKAQADVTPQLIVSLST 990
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI 1192
+G I+VGD+ +T + YK D W+T ++D E G + N+F+
Sbjct: 991 QGSRIIVGDVQHGITYVVYKPTTNKLIPFVDDTVSRWVTCTTMVDYESVAGGDKFGNMFL 1050
Query: 1193 CQKDSAATSDEDRTHLQEVGTVHLV 1217
+ AT + D E G +HL+
Sbjct: 1051 VRCSEKATQEAD----DESGGLHLI 1071
>gi|154295205|ref|XP_001548039.1| pre-mRNA splicing factor 3b [Botryotinia fuckeliana B05.10]
Length = 1020
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 122/514 (23%), Positives = 207/514 (40%), Gaps = 52/514 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + +E E +G T V+ K++ + + L L +G +FV S
Sbjct: 309 FLLQTDDGDLFKITIEMVEDDNGQPTGEVRRLKIKYFDTVPVATSLCILKSGFLFVASEF 368
Query: 140 GDSQLVKLNR--SPDENGTYVS-------------------------VMESFTNLAPIID 172
G+ Q + + DE +VS ++ES ++ P++D
Sbjct: 369 GNHQFYQFEKLGDDDEETEFVSDDFPTGAHESYTPIYFHPRPAENLSLVESIDSMNPLMD 428
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
V +L + Q+ + G + R +++G+ + E +LPG+ +W +
Sbjct: 429 CKVANLTDEDAPQIYSICGTGARSTFRTLKHGLEVSEIVESELPGVPSAVWTTKLTRGDT 488
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 489 YDAYIILSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIR 547
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + + +
Sbjct: 548 ADH--RVNEWAAPQHRSIVAATTNERQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMSGT 605
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E ++Q AVG D + R+LSL +LE + L
Sbjct: 606 VTCLSLG-----EVPEGRQRSQFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSPPNAL 659
Query: 406 SILMTCFEGH----CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ YL + L G LD +G L+D + LG +P L
Sbjct: 660 SIMAMSDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPVKLFRVAVQG 719
Query: 462 TTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
T V A S RP + YS + + ++ + + ++E + + +
Sbjct: 720 QTAVLALSSRPWLGYSDPVTKGFMLTPLDYPALEWGWNFSSEQCTEGMVGIQGQNLRIFS 779
Query: 520 IDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
I+++ L ++PL PRR F VI
Sbjct: 780 IEKLTDNLLQESIPLTYTPRRFVRHPEHACFYVI 813
>gi|322693432|gb|EFY85292.1| Pre-mRNA-splicing factor RSE1 [Metarhizium acridum CQMa 102]
Length = 1221
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 195/458 (42%), Gaps = 62/458 (13%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E +G T V+ K++ +
Sbjct: 297 MHKLKG--SAGAFF------FLLQTEDGDLFKVTIDMVEDEEGSPTGEVRRLKIKYFDTV 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN---------------GTY------- 157
+ L L +G +++ S+ G+ + + D++ +Y
Sbjct: 349 PVATSLCILKSGFLYIASQFGNFSFYQFEKLGDDDEELEFSSDDFPVDPQASYDPVYFHP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
++++ES ++ P++D V +L + Q+ T G + R++R+G+ + E
Sbjct: 409 RPAENLALVESIPSMNPLLDCQVANLTGEDAPQIYTVCGNGARSTFRMLRHGLEVNEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPGI +W L + + D +VLSF T VL++ G VEE GF++ T
Sbjct: 469 SELPGIPSAVWTLKLNRGEQYDAYIVLSFTNGTLVLSI-GETVEEVSDSGFSTSVPTLAA 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I +V+ W+ P +SI S N +QV A +G VY+
Sbjct: 528 QLLGDDGLIQVHPKG---IRHVRNGKVNEWDAPQHRSIVAASTNAHQVAIALSSGEIVYF 584
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V CL + E A++ AVG D + R+LSL
Sbjct: 585 EMDSDGSLAEYDEKKEMFGTVTCLSLG-----EVPEGRARSSFLAVGC-DDCTVRILSLD 638
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRL 439
+LE + L P S+ + + YL + L G LD +G L
Sbjct: 639 PESTLESKSVQALTAA--PSSLAIIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGEL 696
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYS 477
TD ++ LG + L TT V S RP + YS
Sbjct: 697 TDTRQKFLGPKQVRLFQVTVQGTTCVLGLSSRPWLGYS 734
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 1039 EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGK 1095
+D ++ ++GT VV+P + F + +L+ I + +I+ ++ F GK
Sbjct: 894 QDNESFLIVGTGKDIVVNPRNFSEAYIYVYRFQEEGRELEFIHKTKIEEPALALIPFQGK 953
Query: 1096 LLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTME 1155
LLA + T+R+++ + LR + + L +G I+VGD+ + +T + YK
Sbjct: 954 LLAGVGKTLRVYDLGMRQMLRKAQAEVAPQQIVSLNTQGSRIIVGDVQQGVTYVTYKPTT 1013
Query: 1156 GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAATSDEDRTHLQ 1209
+ D W+T ++D E G + N+FI C ++ +DE+++ L
Sbjct: 1014 NKLIPFADDIIARWITCTTMVDYESVAGGDKFGNMFIVRCPPKASEEADEEQSGLH 1069
>gi|66811906|ref|XP_640132.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
gi|74854972|sp|Q54SA7.1|SF3B3_DICDI RecName: Full=Probable splicing factor 3B subunit 3
gi|60468134|gb|EAL66144.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
Length = 1256
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 145/316 (45%), Gaps = 45/316 (14%)
Query: 108 VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLV------------KLNRSPDENG 155
V E V I + CLT L NG +F S GD L + R D++G
Sbjct: 329 VSEVNVNYFDTIVLANCLTVLKNGFLFAASEFGDHTLYFFKSIGDEEEEGQAKRLEDKDG 388
Query: 156 --------TYVSVMESFTNL---------APIIDMVVVDLERQGQGQLVTCSGGFKEGSL 198
+ + ME NL +PIID V+DL R+ QL + G SL
Sbjct: 389 HLWFTPRNSCGTKMEELKNLEPTSHLSSLSPIIDFKVLDLVREENPQLYSLCGTGLNSSL 448
Query: 199 RIIRNGIGIEEHACIDLPGI-KGIWALSIG-SPKNLDNT---LVLSFVGHTRVLTLSGAE 253
+++R+G+ + +LPG+ GIW + SP +D T +V+SFVG T VL++ G
Sbjct: 449 KVLRHGLSVTTITTANLPGVPSGIWTVPKSTSPNAIDQTDKYIVVSFVGTTSVLSV-GDT 507
Query: 254 VEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVS 313
++E G T ++ ++QV P+ I +S R++ W P K+I S
Sbjct: 508 IQENHESGILETTTTLLVKSMGDDAIIQVFPTGFRHI--KSDLRINEWRAPGRKTIVRAS 565
Query: 314 CNKNQVLCA-TGCDVYYLEV-HGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQL 371
N++Q+ A +G ++ Y E+ S + ++ + L ++AC++ISP+ A+
Sbjct: 566 ANQSQLAIALSGGEIIYFELDQASNLIEIIKKDLRRDIACIEISPIPKGRN-----MARF 620
Query: 372 AAVGLWTDISARLLSL 387
AV W R+LSL
Sbjct: 621 IAVSDWEG-PIRVLSL 635
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 100/192 (52%), Gaps = 9/192 (4%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA---VVHPEENEPKQGRII 1065
I+D T E L + L GE S+ + FGE + V+G V++P+ + K +
Sbjct: 908 IMDPITHESLESLMLEDGEAGFSVCTCSFGESGEIFLVVGCVTDMVLNPKSH--KSAHLN 965
Query: 1066 IFHYDDG--KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHF 1122
++ + DG KL+ + + E++ Y+M +F GKL+ + ++R+++ +K LR E +
Sbjct: 966 LYRFIDGGKKLELLYKTEVEEPVYAMAQFQGKLVCGVGKSIRIYDMGKKKLLRKCETKNL 1025
Query: 1123 NNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFL 1182
N I + GD ++VGD+ S+ ++YK E + D P WMTS +LD +
Sbjct: 1026 PNTIVNIHSL-GDRLVVGDIQESIHFIKYKRSENMLYVFADDLAPRWMTSSVMLDYDTVA 1084
Query: 1183 GAENSYNLFICQ 1194
GA+ N+F+ +
Sbjct: 1085 GADKFGNIFVLR 1096
Score = 43.5 bits (101), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 417 YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIY 476
+L V L +G + +LD +G L+D + LG +P L + + + A S R + Y
Sbjct: 702 FLFVGLKNGVVKRATLDSVTGELSDIRTRLLGRKPVKLFKVKVRGSNAMLALSSRVWLNY 761
Query: 477 SSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKL-HIRTVPLGE 535
+ KL +++ + + +L++E +S+ +++ +ID++ L + T+ L
Sbjct: 762 INQGKLDIVPLSIEPLENASNLSSEQSAESIVATSENKIIIFSIDKLGDLFNQETIKLNA 821
Query: 536 APRR 539
P+R
Sbjct: 822 TPKR 825
>gi|18410222|ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
gi|18410226|ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana]
gi|7019653|emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana]
gi|7019655|emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana]
gi|332645831|gb|AEE79352.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
gi|332645833|gb|AEE79354.1| putative splicing factor [Arabidopsis thaliana]
Length = 1214
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 203/491 (41%), Gaps = 55/491 (11%)
Query: 108 VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDS---QLVKLNRSPDENGTYVSVMES- 163
V E KV+ I + + L G +F S G+ Q + PD + ++ME+
Sbjct: 318 VSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETE 377
Query: 164 ---------------------FTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIR 202
+L P++DM V+++ + Q+ + G SLRI+R
Sbjct: 378 EGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILR 437
Query: 203 NGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGG 261
G+ I E A LPG +W + D +V+SF T VL++ G +VEE G
Sbjct: 438 PGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSI-GEQVEEVNDSG 496
Query: 262 FTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLC 321
F + + +++QV P+ I + R++ W P +SI V N+ QV+
Sbjct: 497 FLDTTPSLAVSLIGDDSLMQVHPNGIRHIRED--GRINEWRTPGKRSIVKVGYNRLQVVI 554
Query: 322 A-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379
A +G ++ Y E + ++ ++ + +VACLDI+P+ +++ AVG + D
Sbjct: 555 ALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRK-----RSRFLAVGSY-D 608
Query: 380 ISARLLSLPSLEEVCKEPLGGEII---PRSILMTCFE------------GHCYLLVALGD 424
+ R+LSL + C + L + + P S+L + + +L L +
Sbjct: 609 NTVRILSLDP--DDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQN 666
Query: 425 GSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVF 484
G +F +D +G+L+D + LG +P L + + + S RP + Y
Sbjct: 667 GVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHL 726
Query: 485 SNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQ 543
+ ++ + +++ + + ID + + + VPL PR+
Sbjct: 727 TPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLH 786
Query: 544 ESSQTFGVITT 554
+ +I +
Sbjct: 787 PKRKLLVIIES 797
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ-- 1061
V + ++D T +L E A S+ + F D +L V + PK+
Sbjct: 860 VSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNF-HDKEYGTLLAVGTVKGMQFWPKKNL 918
Query: 1062 --GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR- 1116
G I I+ + +DGK L+ + + +++G ++C+F G+LLA I +RL++ ++ LR
Sbjct: 919 VAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRK 978
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
E F N I + ++ D I VGD+ S +Y+ E + D P W+T+ +
Sbjct: 979 CENKLFPNTI-ISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHV 1037
Query: 1177 DDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
D + GA+ N++ + +D + +ED T
Sbjct: 1038 DFDTMAGADKFGNVYFVRLPQDLSEEIEEDPT 1069
>gi|325096432|gb|EGC49742.1| pre-mRNA-splicing factor Rse1 [Ajellomyces capsulatus H88]
Length = 1209
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 207/520 (39%), Gaps = 52/520 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + L+ E +G T V K++ + I L L +G +FV S
Sbjct: 306 FLLQTEDGDLFKVTLDMVEDDNGQITGEVSRLKLKYFDTVPIASSLCILKSGFLFVASET 365
Query: 140 GDS---QLVKLNRSPDE----NGTY--------------------VSVMESFTNLAPIID 172
G+ Q KL DE + Y V+++ES +L P++D
Sbjct: 366 GNHHFYQFEKLGDDDDEIEFTSDAYSADLSEPLPPAYFRPRPYENVNLVESIDSLNPLMD 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+ +L Q+ T G S R +++G+ + E +LP + +W +
Sbjct: 426 CKIANLTDDDAPQIYTICGTGARSSFRTLKHGLEVAEIVESELPSVPSAVWTTKLTREDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIILSFTNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + RA+
Sbjct: 545 ADR--RVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRAMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E A++ AVG D + R+LSL +LE + L
Sbjct: 603 VTCLSLG-----EVPRGRARSSFLAVGC-DDSTVRILSLDPESTLENKSVQALTSAPSAL 656
Query: 406 SILM----TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ T YL + L G LD +G L+D + LG +P L
Sbjct: 657 SIMAMSDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKE 716
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTFGT 519
T V A S RP + YS F L V+ N +E + + +
Sbjct: 717 QTAVLALSSRPWLGYSHLQTKAFMLTPLDYVSLEWGWNFSSEQCVEGMVGIQGQNLRIFS 776
Query: 520 IDEIQ-KLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDI 558
+++++ L T+PL PR F VI +I
Sbjct: 777 LEKLENNLLQETIPLQYTPRHFIKHPEHPLFYVIEAENNI 816
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N+ ++ +L E A+S+ + F +D T+ V+GT VV+P I F
Sbjct: 864 NSKRVISQIELEENEAAVSVAAVPFSSQDDETFLVVGTGKDMVVNPRSCTAGFIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
+ +L+ I + +++ ++ F G+LLA I + +R+++ ++ LR + + +
Sbjct: 924 EEGKELEFIHKTKVEQPPMALLGFQGRLLAGIGTDLRIYDLGMKQMLRKCQASVVPHLVV 983
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ SLT + YK E D W T ++D E G +
Sbjct: 984 GLQTQGSRIIVSDVQESLTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFG 1043
Query: 1189 NLFI--CQKDSAATSDED 1204
NL++ C ++ +DED
Sbjct: 1044 NLWLLRCPAKASEEADED 1061
>gi|116207186|ref|XP_001229402.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183483|gb|EAQ90951.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1211
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 133/535 (24%), Positives = 221/535 (41%), Gaps = 64/535 (11%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G L + L+ E DG T V+ KV+ I
Sbjct: 297 MHKLKG--SAGAFF------FLLQTDDGDLMKVTLDMVEDNDGNPTGEVRRLKVKYFDTI 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDE-------------------NGTY--- 157
I + L L +G +F G+ L + + D+ N Y
Sbjct: 349 PIAQSLCILKSGFLFSAGEFGNHHLYQFEKLGDDDEELEFSSDDFPTDSRASYNPVYFHP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+ ++ES ++ P+ID + +L + Q+ T G + R++++G+ + E
Sbjct: 409 RPLENLVLVESMDSMNPLIDCKIANLTGEDAPQIYTVCGNRARSTFRMLKHGLEVSEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPG +W + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGTPAAVWTTKLTKYDEYDGYIVLSFTNATLVLSI-GETVEEVTESGFLTSVPTLAV 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I + RV+ W P +SI + N+NQV+ A +G VY+
Sbjct: 528 QQLGEEGLIQVHPKG---IRHIVQGRVNEWPAPQHRSIVAAATNENQVVIALSSGEIVYF 584
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS LA + E++ ++ LS ++ AVG D + R+LSL
Sbjct: 585 EMDADGS----LAEYDEKKEMSGT-VTSLSLGRVPEGLRRSSFLAVGC-DDCTVRILSLD 638
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC-----YLLVALGDGSMFYFSLDPASGRLT 440
+LE + L P S+L+ E YL + L G LD +G LT
Sbjct: 639 PESTLEMKSIQALTSA--PSSLLVMAMEDSTGGMTLYLHIGLHSGVYLRTVLDEVTGELT 696
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL--RQVNHMCSL 498
D ++ LG +PT L + V A S RP + Y+ FS L ++ +
Sbjct: 697 DTRQKFLGPKPTKLFQVSVQNQPCVLALSSRPWLGYTDPITKNFSMTPLIYSELEFGWNF 756
Query: 499 NAESYPDSLALATDSTFTFGTIDEIQKLHI-RTVPLGEAPRRIAYQESSQTFGVI 552
++E + + + TI+ + I +++PL P+R+ F I
Sbjct: 757 SSEQCLEGMVGIHANFLRIFTIERLGDTMIQKSIPLTYTPKRLVKHPEQPYFYTI 811
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 1029 ALSLISSKFGEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGA 1085
A+ SS+ GE ++ ++GT V++P + + FH D L+ I + +++
Sbjct: 886 AVVPFSSQEGE---SFLIVGTGKDMVLNPRKFSEGYIHVYRFHEDGRDLEFIHKTKVEEP 942
Query: 1086 CYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRS 1145
++ F G+LLA I T+R+++ + LR + + L+ +G I+VGD+ +
Sbjct: 943 PMALIPFQGRLLAGIGKTLRVYDLGLRQLLRKAQGEVAPQLIVSLQTQGSRIIVGDVQQG 1002
Query: 1146 LTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAATSDE 1203
+T + YK + D W T ++D E G + N++I C + ++ SDE
Sbjct: 1003 ITYVVYKPESNKLLPFADDTINRWTTCTTMVDYESVAGGDKFGNIWILRCSERASQESDE 1062
Query: 1204 DRTHLQ 1209
+ +Q
Sbjct: 1063 PGSEIQ 1068
>gi|296417673|ref|XP_002838477.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634416|emb|CAZ82668.1| unnamed protein product [Tuber melanosporum]
Length = 1202
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 130/552 (23%), Positives = 216/552 (39%), Gaps = 66/552 (11%)
Query: 92 FMLLLEKEE--------KMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQ 143
F LL+ E+ D V KV+ + I L L +G +FV S G+
Sbjct: 304 FFFLLQTEDGDLLKVTLDYDDESGVSRIKVKYFDTVPIASSLCILKSGFLFVASEGGNHH 363
Query: 144 LVKL---------------NRSPDENGTYV------------SVMESFTNLAPIIDMVVV 176
+ N SPD V S++E+ ++ P++D +
Sbjct: 364 FYQFEKLGDDDEEIEFSSDNFSPDPLDRTVPIYFHPRAPENLSLVEAIDSMNPLVDCKIA 423
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNT 235
+L Q+ T G + R +++G+ E +LPG+ +W + + D
Sbjct: 424 NLTDDDAPQIYTVCGSGPRSTFRTLKHGLETTEIVSSELPGVPSAVWTTKLTNGDEFDAY 483
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+VLSF T VL++ G VEE GF S T + +LQV P I +
Sbjct: 484 IVLSFTNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDALLQVHPKGIRHIRADR- 541
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVACLDI 354
RV+ W P +SI S N QV A + ++ Y E+ QLA + E++ +
Sbjct: 542 -RVNEWPAPQHRSIVAASTNSRQVAVALSSGEIVYFEMDSD--GQLAEYEEKKEMSGT-V 597
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGGEII--P 404
+ LS E ++ AVG D + R+LSL S++ + P I+ P
Sbjct: 598 TCLSLGEVPEGRVRSSFLAVGC-DDATVRILSLDPDSTLESKSVQALTSAPSSLCIMSMP 656
Query: 405 RSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
S T YL + L G LD +G LTD + LG +P + + +
Sbjct: 657 DSASETSRSLTLYLHIGLYSGVYLRTVLDTVTGELTDTRTRFLGPKPVKIFKVIAQGLPS 716
Query: 465 VFACSDRPTVIYS-SNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI 523
V A S RP + YS + + + + + + + ++E P+ + TI+++
Sbjct: 717 VLALSSRPWLGYSDARGQFMLTPLTYPMLEWGWTFSSEQCPEGMVGIQGQNLRIFTIEKL 776
Query: 524 -QKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGST---PVRPSASTQAQNTT 579
L ++PL PR++ F V EAD +T + AQN
Sbjct: 777 TDNLQQESIPLSYTPRKMLKHPDQPVFYV-------AEADANTLSVATKQKLMNSAQNGD 829
Query: 580 SSTISSLSYIKP 591
++ ++ + P
Sbjct: 830 TNELAPAEFGNP 841
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 14/222 (6%)
Query: 995 PADF-NMEVEVH---NLLIIDQNTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGT 1049
PA+F N E H + ++D + E+ +L E A S+ + F +D + V+GT
Sbjct: 835 PAEFGNPRGEGHWASCISVVDPISKEVTQRIELEENEAAFSIAAVSFSSQDDEWFLVVGT 894
Query: 1050 A---VVHPEENEPKQGRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTV 1104
+ P ++ G I I+ + +DGK L+ I + ++ ++ F G+LLA I +
Sbjct: 895 GKDTCLSPRKS--ANGYIHIYRFLNDGKELEFIHKTKVDEPPLALLGFQGRLLAGIGKDL 952
Query: 1105 RLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRD 1164
++++ ++ LR + L+ +G I+V D+ S+T + YK + + D
Sbjct: 953 KIYDLGMKQLLRKAQGQVAPNVINGLQTQGSRIIVSDVQESVTYVVYKYQDNRLIPFADD 1012
Query: 1165 YNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAATSDED 1204
P + T ++D E G + N +I C + ++ SDED
Sbjct: 1013 MIPRFTTCTTMVDYETVAGGDRFGNFWIVRCPQKASDESDED 1054
>gi|406868052|gb|EKD21089.1| pre-mRNA-splicing factor rse1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1236
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 177/436 (40%), Gaps = 49/436 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + +E E +G T VK K++ + I L L +G +FV S
Sbjct: 309 FLLQTDDGDLFKVTIEMVENDEGAPTGEVKRLKIKYFDTVPIATSLCILKSGFLFVASEF 368
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ Q + + D++ +S++ES ++ P++D
Sbjct: 369 GNHQFYQFEKLGDDDEETEFISDNFPTDPLEPYTPVYFHPRPAENLSLVESIDSMNPLMD 428
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
V +L + Q+ + G + R +R+G+ + E +LPG+ +W +
Sbjct: 429 CKVANLTEEDAPQIYSICGTGARSTFRTLRHGLEVSEIVESELPGVPSAVWTTKLTRNDT 488
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + ++QV P I
Sbjct: 489 YDAYIILSFTNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGDDGLIQVHPKGIRHIR 547
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N QV A +G VY+ ++ GS + + +
Sbjct: 548 ADR--RVNEWAAPQHRSIVAAATNARQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMSGT 605
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E ++Q AVG D + R+LSL +LE + L
Sbjct: 606 VTCLSLG-----EVPEGRVRSQFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 659
Query: 406 SILMTCFEGH----CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ YL + L G LD +G L+D + LG +P L
Sbjct: 660 SIMAMSDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPARLFRVSVQG 719
Query: 462 TTNVFACSDRPTVIYS 477
V A S RP + YS
Sbjct: 720 QAAVLALSSRPWLGYS 735
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 1017 ILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDG 1072
+L L E A+S+ + F +D + V+GT +V P + + FH +
Sbjct: 871 VLQKIDLDDNEAAVSMAAVSFSSQDDEVFLVIGTGKDMIVSPRSSTAGFIHVYRFHDNGK 930
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
+++ I + +++ ++ F G+LL I +R+++ + LR + + + L+
Sbjct: 931 EIEFIHKTKVEEPPMALLGFQGRLLVGIGKDLRIYDLGMRQLLRKAQAEVAPNLIVGLQT 990
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI 1192
+G I+V D+ S+ ++ YK E D W + ++D E G + NL++
Sbjct: 991 QGSRIVVSDVQESIIMIVYKFQENKLIPFVDDTISRWTSCTTMVDYETVAGGDKFGNLWL 1050
Query: 1193 CQKDSAATSDEDRTHLQEVGTVHLV 1217
+ + A+ + D +E HLV
Sbjct: 1051 LRCPTKASEEAD----EEGSASHLV 1071
>gi|225560964|gb|EEH09245.1| pre-mRNA-splicing factor rse1 [Ajellomyces capsulatus G186AR]
Length = 1209
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 180/436 (41%), Gaps = 49/436 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + L+ E +G T V K++ + I L L +G +FV S
Sbjct: 306 FLLQTEDGDLFKVTLDMVEDDNGQITGEVSRLKLKYFDTVPIASSLCILKSGFLFVASET 365
Query: 140 GDS---QLVKLNRSPDE----NGTY--------------------VSVMESFTNLAPIID 172
G+ Q KL DE + Y V+++ES +L P++D
Sbjct: 366 GNHHFYQFEKLGDDDDEIEFTSDAYSADLSEPLPPAYFRPRPYENVNLVESIDSLNPLMD 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+ +L Q+ T G S R +++G+ + E +LP + +W +
Sbjct: 426 CKIANLTDDDAPQIYTICGTGARSSFRTLKHGLEVAEIVESELPSVPSAVWTTKLTREDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIILSFTNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + RA+
Sbjct: 545 ADR--RVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRAMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E A++ AVG D + R+LSL +LE + L
Sbjct: 603 VTCLSLG-----EVPRGRARSSFLAVGC-DDSTVRILSLDPESTLENKSVQALTSAPSAL 656
Query: 406 SILM----TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ T YL + L G LD +G L+D + LG +P L
Sbjct: 657 SIMAMSDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKE 716
Query: 462 TTNVFACSDRPTVIYS 477
T V A S RP + YS
Sbjct: 717 QTAVLALSSRPWLGYS 732
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N+ ++ +L E A+S+ + F +D T+ V+GT VV+P I F
Sbjct: 864 NSKRVISQIELEENEAAVSVAAVPFSSQDDETFLVVGTGKDMVVNPRSCTAGFIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
+ +L+ I + +++ ++ F G+LLA I + +R+++ ++ LR + + +
Sbjct: 924 EEGKELEFIHKTKVEQPPMALLGFQGRLLAGIGTDLRIYDLGMKQMLRKCQASVVPHLVV 983
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ SLT + YK E D W T ++D E G +
Sbjct: 984 GLQTQGSRIIVSDVQESLTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFG 1043
Query: 1189 NLFI--CQKDSAATSDED 1204
NL++ C ++ +DED
Sbjct: 1044 NLWLLRCPAKASEEADED 1061
>gi|297829750|ref|XP_002882757.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328597|gb|EFH59016.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1384
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 135/581 (23%), Positives = 237/581 (40%), Gaps = 104/581 (17%)
Query: 103 DGTFSVKEPKVELLG-EISIPECL---------TYLDNGVVFVGSRLGDSQLVKLNRSPD 152
DG F + E E G ++++ ECL +++ G + + + D + KL
Sbjct: 398 DGEFYMFELIYEDDGVKVNLSECLYKGLPCKEILWVEGGFLATFAEMADGTVFKLGSEK- 456
Query: 153 ENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEE--H 210
+ M S N+API+D V+D + + + Q+ C G +EGSLRIIR+GI +E+
Sbjct: 457 -----LHWMSSIQNIAPILDFSVMDDQNEKRDQIFACCGVTREGSLRIIRSGINVEKLLK 511
Query: 211 ACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFY 270
GI G W + + + LVLSFV TRVL++ + + T+ GF SD T
Sbjct: 512 TAPVYQGITGTWTVKMKLTDVYHSFLVLSFVEETRVLSVGLSFKDVTDSVGFQSDVCTLA 571
Query: 271 CGNVDPRTVLQVTPSAAILISTESKAR----------VSSWEPPNGKSISVVSCNKNQVL 320
CG V ++Q+ A L A SSW P N SIS+ + +N ++
Sbjct: 572 CGLVADGLLVQIHQDAIRLCMPTMDAHSDGIPVSSPFFSSWFPDN-VSISLGAVGQNLIV 630
Query: 321 CATG--CDVYYLEVHG-----SEIKQLAHRALEYEVACLDI---------SPLSNEETSS 364
+T C + L V EI ++ L+YEV+C+ + S S+ + S
Sbjct: 631 VSTSNPCFLSILGVKSVSSQCCEIYEIQRVTLQYEVSCISVPQKHIGKKRSCASSPDNSC 690
Query: 365 EPA----------------KAQLAAVGLWTD-ISARLLS--LPSLEEVCKEPLGGEIIPR 405
+ A K + + D + R+L+ L SL + G IP+
Sbjct: 691 KAAIPSGMEQGYSFLIGTHKPSVEVLSFSEDGVGVRVLASGLVSLTNTMGAVISG-CIPQ 749
Query: 406 SILMTCFEGHCYLLVALGDGSMF-----------------YFSLDPASGRLTDKKKVTL- 447
+ + + Y+L L +G + YFS + KK L
Sbjct: 750 DVRLVLVD-QLYVLSGLRNGMLLRFEWPLFSNASGLNCPDYFSYCKEEMDIVVGKKDNLP 808
Query: 448 -----------GTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMC 496
G P L F +++ A SDRP ++ ++ L +++++ + H
Sbjct: 809 INLLLIATRRIGITPVFLVPFSDSLDSDIIALSDRPWLLQTARQSLSYTSISFQPSTHAT 868
Query: 497 SLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRI 556
+ + P + +++ + ++ + + LG PR++ Y S+ +I R
Sbjct: 869 PVCSSECPQGILFVSENCLHLVEMVHSKRRNAQKFHLGGTPRKVIYHSESKL--LIVMRT 926
Query: 557 DIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQS 597
D+ + ++ + S ++ S +KPG T +S
Sbjct: 927 DLYDT-------CTSDICCVDPLSGSVLSSYKLKPGETGKS 960
Score = 41.6 bits (96), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLRIIR+GI +E+ GI G W + + + LVLSFV TRVL++
Sbjct: 494 EGSLRIIRSGINVEKLLKTAPVYQGITGTWTVKMKLTDVYHSFLVLSFVEETRVLSV 550
>gi|281202530|gb|EFA76732.1| CPSF domain-containing protein [Polysphondylium pallidum PN500]
Length = 933
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 178/413 (43%), Gaps = 42/413 (10%)
Query: 175 VVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLD 233
V+DL + Q Q+ +G ++R++R G+ I + A LPGI G+W + ++D
Sbjct: 246 VMDLVNEEQPQIYALTGVADRSAMRVLRYGLPIAQIAGTPLPGIPSGLWTIPRSQEDSID 305
Query: 234 NTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
+V+SF+G T VL++ G VEE G + + + +++QV P I +
Sbjct: 306 KYIVVSFIGSTLVLSV-GETVEEVVDSGILATTTSILVRPIGADSIIQVFPHGIRHIKGD 364
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCAT-GCDVYYLEVHGS-EIKQLAHRALEYEVAC 351
R++ W P K+IS+ + N QV+ A G +V Y E+ + + ++A + E++
Sbjct: 365 R--RINEWRAPGRKTISLATSNATQVVIALGGGEVIYFELDAAGNLSEVAKKEFRREISA 422
Query: 352 LDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS---LEEV--------------- 393
L+I+P+ A+ A+G W + R+LSL L +V
Sbjct: 423 LEIAPVRKGR-----QMARFVAIGDW-EGPVRVLSLDKDNLLNQVSVLDTERMHIESLMM 476
Query: 394 ------CKEPLG-----GEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDK 442
+ P G I + L +L V L +G M +DP +G L+D
Sbjct: 477 NEMTIGVEMPEGTASSSSAIAKQQQLQNQSNQVLFLNVGLKNGVMKRAVVDPITGELSDT 536
Query: 443 KKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAES 502
+ LG +P + S V A S R + Y + + V++ +++ ++E
Sbjct: 537 RTRLLGRKPVKFSRVKLKSGNAVLALSSRVWLCYVNQGRYDMVPVSVEPLDNASGFSSEH 596
Query: 503 YPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
PD + +++ I+++ +K + VP PRR + I T
Sbjct: 597 CPDGIVATSENNLKIFVIEKLSEKFNQVNVPYKCTPRRFVVHPQTHYIVSIET 649
Score = 40.8 bits (94), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 3 SLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
++R++R G+ I + A LPGI G+W + ++D +V+SF+G T VL++
Sbjct: 268 AMRVLRYGLPIAQIAGTPLPGIPSGLWTIPRSQEDSIDKYIVVSFIGSTLVLSV 321
>gi|322707263|gb|EFY98842.1| Pre-mRNA-splicing factor rse-1 [Metarhizium anisopliae ARSEF 23]
Length = 1212
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 194/458 (42%), Gaps = 62/458 (13%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E +G T VK K++ +
Sbjct: 297 MHKLKG--SAGAFF------FLLQTEDGDLFKVTIDMVEDEEGSPTGEVKRLKIKYFDTV 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENG---------------TY------- 157
+ L L +G +++ S+ G+ + + D++ +Y
Sbjct: 349 PVATSLCILKSGFLYIASQFGNFSFYQFEKLGDDDAELEFSSDDFPVDPQASYDPVYFHP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
++++ES ++ P++D V +L + Q+ T G + R++R+G+ + E
Sbjct: 409 RPAENLALVESIPSMNPLLDCQVANLTGEDAPQIYTVCGNGARSTFRMLRHGLEVNEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPGI +W L + + D +VLSF T VL++ G VEE GF++ T
Sbjct: 469 SELPGIPSAVWTLKLNRGEQYDAYIVLSFTNGTLVLSI-GETVEEVSDSGFSTSVPTLAA 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I +V+ W+ P +SI S N +QV A +G VY+
Sbjct: 528 QLLGDDGLIQVHPKG---IRHIRNGKVNEWDAPQHRSIVAASTNAHQVAIALSSGEIVYF 584
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V CL + E ++ AVG D + R+LSL
Sbjct: 585 EMDSDGSLAEYDEKKEMFGTVTCLSLG-----EVPEGRVRSSFLAVGC-DDCTVRILSLD 638
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRL 439
+LE + L P S+ + + YL + L G LD +G L
Sbjct: 639 PESTLESKSVQALTAA--PSSLAIIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGEL 696
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYS 477
TD ++ LG + L TT V S RP + YS
Sbjct: 697 TDTRQKFLGPKQVRLFQVTVQGTTCVLGLSSRPWLGYS 734
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 5/176 (2%)
Query: 1039 EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGK 1095
+D ++ ++GT VV+P + F + +L+ I + +I+ ++ F GK
Sbjct: 894 QDNESFLIVGTGKDVVVNPRNFSEAYIYVYRFQEEGRELEFIHKTKIEEPALALIPFQGK 953
Query: 1096 LLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTME 1155
LLA + T+R+++ + LR + + L +G I+VGD+ + +T + YK
Sbjct: 954 LLAGVGKTLRVYDLGMRQMLRKAQAEVAPQQIVSLNTQGSRIIVGDIQQGVTYVTYKPTT 1013
Query: 1156 GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAATSDEDRTHLQ 1209
+ D W T ++D E G + N+FI C ++ +DE+++ L
Sbjct: 1014 NKLIPFADDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPPKASEEADEEQSGLH 1069
>gi|399216895|emb|CCF73582.1| unnamed protein product [Babesia microti strain RI]
Length = 1232
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 213/517 (41%), Gaps = 61/517 (11%)
Query: 72 GSLWNGWSERYLLGDLAGRLFMLL------LEKEEKMDGTFSVKEPKVELLGEISIPECL 125
G L N W ++ + F+LL L K E + +VKE + I L
Sbjct: 289 GILINAW----VVHKMVDFFFILLQTEYGDLLKVEIVSNDQTVKEIVCRYFDTVPIANSL 344
Query: 126 TYLDNGVVFVGSRLGDS---QLVKLNRS---------PDENGTYVS----------VMES 163
L G +FVGS G+ Q + L P+ V+ +++
Sbjct: 345 CVLKTGYLFVGSEFGNHCFYQFISLGNDETTACTSLHPEGGNAIVAFNPRSPKNLLLVDE 404
Query: 164 FTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIW 222
T+L+P++DM + D ++ G + +I+R GI +EE A +LPG + ++
Sbjct: 405 LTSLSPVVDMKIADARGLDTSEIYLACGRGSRSTFQILRPGISVEELANNELPGYPRYVF 464
Query: 223 ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQV 282
+L + + +++ F G+T VL++ G VEE F ++ T + + +Q+
Sbjct: 465 SLKDKNADDCVGYIIVVFEGNTLVLSV-GDAVEEVSNSFFNTETTTLCAMLMYDDSFIQI 523
Query: 283 TPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSE-IKQL 340
I VS W+PP K I S N Q+L A +G +V Y E+ S + ++
Sbjct: 524 HEGG---IRHIIDNHVSEWKPPTSKRIKCCSANTRQILIALSGGEVIYFEIDESHALVEI 580
Query: 341 AHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEP 397
R ++ C+ I + + S A GL D +L+SL L+++ +
Sbjct: 581 FKRNFGVDITCMAIQAVPTDRVYSSFG----AISGL--DNVVKLISLEKEKGLKQLSTQL 634
Query: 398 LGGEIIPRSILMTCFE------GH------CYLLVALGDGSMFYFSLDPASGRLTDKKKV 445
L S+ + + GH +L+V L G M ++D +G L+D+
Sbjct: 635 LPNNATAESVCIAQIDSLVRDAGHMRRNSSLFLVVGLNTGVMIRSNIDAITGALSDQHSR 694
Query: 446 TLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPD 505
LG + + A SD+ + Y+ KL S +N V H+ S + D
Sbjct: 695 FLGARAVRFSLVKVGDGMGFMAMSDKSWLCYAHQGKLFTSYINYDMVEHVASFCSSHCSD 754
Query: 506 S-LALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIA 541
+A++ +S + ++ Q+ PL PR+I+
Sbjct: 755 GFVAISGNSLRIYRCLNLGQEFSQSVAPLTYTPRKIS 791
Score = 39.7 bits (91), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 1128 LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENS 1187
++L G+ I VGD+ S+T+L++ I D P W+T +LD +
Sbjct: 1006 MWLGASGNRIFVGDIRESITVLKFDEQMAKLSLICDDIRPRWITGATVLDHHTVALVDKF 1065
Query: 1188 YNLFICQKDSAATS 1201
+C+ S A++
Sbjct: 1066 DTFAVCRVPSEASA 1079
>gi|449437538|ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
Length = 1376
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 122/248 (49%), Gaps = 24/248 (9%)
Query: 125 LTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQG 184
L +++ G + +GD ++KL ENG + N+API+DM VVD + Q
Sbjct: 423 LLWVEGGYLAALVEMGDGMVLKL-----ENGRLIYA-NPIQNIAPILDMSVVDKHDEKQD 476
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVG 242
Q+ C G EGSLRIIRNGI +E GI IW + + + LVLSFV
Sbjct: 477 QMFACCGMAPEGSLRIIRNGISVENLLRTSPIYQGITSIWTIKMKRSDTYHSYLVLSFVE 536
Query: 243 HTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAIL-ISTE-------- 293
TRVL++ + ++ T+ GF SD T CG +D V+Q+ +A L + T+
Sbjct: 537 ETRVLSVGLSFIDVTDSVGFQSDTCTLACGLLDDGLVIQIHQNAVRLCLPTKIAHSEGIE 596
Query: 294 -SKARVSSWEPPN-GKSISVVSCNKNQVLCATGCDVYYLEV-----HGSEIKQLAHRALE 346
S +SW P N G S+ V N V + C ++ L V + EI + + L+
Sbjct: 597 LSSPACTSWFPDNIGISLGAVGHNVIVVSTSNPCFLFILGVRKVSGYDYEIYEKQYLRLQ 656
Query: 347 YEVACLDI 354
YE++C+ I
Sbjct: 657 YELSCISI 664
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 55/110 (50%)
Query: 447 LGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS 506
+G P L +++ A SDRP +++S+ H L +++++ + H+ + + P
Sbjct: 824 IGITPVFLVPLTDRLDSDIIALSDRPWLLHSARHSLSYTSISFQPSTHVTPVCSADCPSG 883
Query: 507 LALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRI 556
L +S+ + ++L+++ LG PR++ Y S+ V+ T++
Sbjct: 884 LLFVAESSLHLVEMVHTKRLNVQKFHLGGTPRKVLYHSESKLLLVMRTQL 933
Score = 45.1 bits (105), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLRIIRNGI +E GI IW + + + LVLSFV TRVL++
Sbjct: 487 EGSLRIIRNGISVENLLRTSPIYQGITSIWTIKMKRSDTYHSYLVLSFVEETRVLSV 543
>gi|159130328|gb|EDP55441.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus
A1163]
Length = 1225
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 130/558 (23%), Positives = 224/558 (40%), Gaps = 58/558 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + ++ E +G T VK K++ + I L L +G ++V S
Sbjct: 306 FLLQTEDGDLFKVTIDMVEDDNGQLTGEVKRLKIKYFDTVPIASSLLILKSGFLYVASEA 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++E+ +L P+ID
Sbjct: 366 GNHHFYQFEKLGDDDEETEFNSENFPADLSVPCEPVFFRPRGAENLNLVETLNSLNPLID 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+V+L Q+ T SG S R +++G+ + E +LP + +W +
Sbjct: 426 SKIVNLNEDDAPQIYTVSGSGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRADE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIILSFANGTLVLSI-GETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGIRHIL 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ G+ + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V CL + E ++ AVG D + R+LSL S++ + P
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656
Query: 401 EIIPRSILMTCFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
I+ S+ + G YL + L G LD +G L+D + LG +P L
Sbjct: 657 NIM--SMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSV 714
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTF 517
T V A S RP + YS F L V N +E + +
Sbjct: 715 KGQTAVLALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQAQNLRI 774
Query: 518 GTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQ 576
+I+++ ++ ++PL PRR+ F VI + D +T R ++A+
Sbjct: 775 FSIEKLDNNILQESIPLSNTPRRMLKHPEQPLFYVIES--DNNVLSPATRARLIEDSKAR 832
Query: 577 NTTSSTISSLSYIKPGST 594
N ++ + + P +T
Sbjct: 833 NGETNVLPPEDFGYPRAT 850
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 1027 EYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082
E A+S+ + F +D T+ V+GTA +V+P + I F D +L+ I + ++
Sbjct: 878 EAAVSMAAVPFSSQDDETFLVVGTAKDMIVNPPSSAGGFIHIYRFQEDGKELEFIHKTKV 937
Query: 1083 KGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDL 1142
+ ++ F G+LLA I ST+R+++ ++ LR + + + L+ +G I+V D+
Sbjct: 938 EEPPLALLGFQGRLLAGIGSTLRIYDLGMKQLLRKCQAQVVSKTIVGLQTQGSRIVVSDV 997
Query: 1143 MRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAAT 1200
S+T + YK + D W TS ++D E G + NL++ C K ++
Sbjct: 998 RESVTYVVYKYQDNILIPFVDDSVSRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKASEE 1057
Query: 1201 SDEDRT--HL-QEVGTVH 1215
+DED + HL E G +H
Sbjct: 1058 ADEDGSGAHLIHERGYLH 1075
>gi|70992737|ref|XP_751217.1| nuclear mRNA splicing factor [Aspergillus fumigatus Af293]
gi|74670386|sp|Q4WLI5.1|RSE1_ASPFU RecName: Full=Pre-mRNA-splicing factor rse1
gi|66848850|gb|EAL89179.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus
Af293]
Length = 1225
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 130/558 (23%), Positives = 224/558 (40%), Gaps = 58/558 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + ++ E +G T VK K++ + I L L +G ++V S
Sbjct: 306 FLLQTEDGDLFKVTIDMVEDDNGQLTGEVKRLKIKYFDTVPIASSLLILKSGFLYVASEA 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++E+ +L P+ID
Sbjct: 366 GNHHFYQFEKLGDDDEETEFNSENFPADLSVPCEPVFFQPRGAENLNLVETLNSLNPLID 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+V+L Q+ T SG S R +++G+ + E +LP + +W +
Sbjct: 426 SKIVNLNEDDAPQIYTVSGSGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRADE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIILSFANGTLVLSI-GETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGIRHIL 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ G+ + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V CL + E ++ AVG D + R+LSL S++ + P
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656
Query: 401 EIIPRSILMTCFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
I+ S+ + G YL + L G LD +G L+D + LG +P L
Sbjct: 657 NIM--SMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSV 714
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTF 517
T V A S RP + YS F L V N +E + +
Sbjct: 715 KGQTAVLALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQAQNLRI 774
Query: 518 GTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQ 576
+I+++ ++ ++PL PRR+ F VI + D +T R ++A+
Sbjct: 775 FSIEKLDNNILQESIPLSNTPRRMLKHPEQPLFYVIES--DNNVLSPATRARLIEDSKAR 832
Query: 577 NTTSSTISSLSYIKPGST 594
N ++ + + P +T
Sbjct: 833 NGETNVLPPEDFGYPRAT 850
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 1027 EYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082
E A+S+ + F +D T+ V+GTA +V+P + I F D +L+ I + ++
Sbjct: 878 EAAVSMAAVPFSSQDDETFLVVGTAKDMIVNPPSSAGGFIHIYRFQEDGKELEFIHKTKV 937
Query: 1083 KGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDL 1142
+ ++ F G+LLA I ST+R+++ ++ LR + + + L+ +G I+V D+
Sbjct: 938 EEPPLALLGFQGRLLAGIGSTLRIYDLGMKQLLRKCQAQVVSKTIVGLQTQGSRIVVSDV 997
Query: 1143 MRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAAT 1200
S+T + YK + D W TS ++D E G + NL++ C K ++
Sbjct: 998 RESVTYVVYKYQDNILIPFVDDSVSRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKASEE 1057
Query: 1201 SDEDRT--HL-QEVGTVH 1215
+DED + HL E G +H
Sbjct: 1058 ADEDGSGAHLIHERGYLH 1075
>gi|449526686|ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227016, partial [Cucumis
sativus]
Length = 997
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 122/248 (49%), Gaps = 24/248 (9%)
Query: 125 LTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQG 184
L +++ G + +GD ++KL ENG + N+API+DM VVD + Q
Sbjct: 423 LLWVEGGYLAALVEMGDGMVLKL-----ENGRLIYA-NPIQNIAPILDMSVVDKHDEKQD 476
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVG 242
Q+ C G EGSLRIIRNGI +E GI IW + + + LVLSFV
Sbjct: 477 QMFACCGMAPEGSLRIIRNGISVENLLRTSPIYQGITSIWTIKMKRSDTYHSYLVLSFVE 536
Query: 243 HTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAIL-ISTE-------- 293
TRVL++ + ++ T+ GF SD T CG +D V+Q+ +A L + T+
Sbjct: 537 ETRVLSVGLSFIDVTDSVGFQSDTCTLACGLLDDGLVIQIHQNAVRLCLPTKIAHSEGIE 596
Query: 294 -SKARVSSWEPPN-GKSISVVSCNKNQVLCATGCDVYYLEV-----HGSEIKQLAHRALE 346
S +SW P N G S+ V N V + C ++ L V + EI + + L+
Sbjct: 597 LSSPACTSWFPDNIGISLGAVGHNVIVVSTSNPCFLFILGVRKVSGYDYEIYEKQYLRLQ 656
Query: 347 YEVACLDI 354
YE++C+ I
Sbjct: 657 YELSCISI 664
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 55/110 (50%)
Query: 447 LGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS 506
+G P L +++ A SDRP +++S+ H L +++++ + H+ + + P
Sbjct: 824 IGITPVFLVPLTDRLDSDIIALSDRPWLLHSARHSLSYTSISFQPSTHVTPVCSADCPSG 883
Query: 507 LALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRI 556
L +S+ + ++L+++ LG PR++ Y S+ V+ T++
Sbjct: 884 LLFVAESSLHLVEMVHTKRLNVQKFHLGGTPRKVLYHSESKLLLVMRTQL 933
Score = 44.7 bits (104), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLRIIRNGI +E GI IW + + + LVLSFV TRVL++
Sbjct: 487 EGSLRIIRNGISVENLLRTSPIYQGITSIWTIKMKRSDTYHSYLVLSFVEETRVLSV 543
>gi|391341059|ref|XP_003744849.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Metaseiulus
occidentalis]
Length = 1223
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 116/516 (22%), Positives = 216/516 (41%), Gaps = 64/516 (12%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE ++ +V E K++ + + + + L +G +FV S G+ L ++
Sbjct: 308 GDIFKITLEFDDD-----AVTEIKLKYFDSLPVAQTMHVLKSGFLFVASEFGNHSLYQIA 362
Query: 149 RSPD--------------ENGTY---------VSVMESFTNLAPIIDMVVVDLERQGQGQ 185
D E T+ + +++ +L+PI+ V DL + Q
Sbjct: 363 HLGDNTDEPEFSSIFPLEEGDTFFFLPRELKNLVLVDEMDSLSPIMTARVADLTNEDTPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G ++R++R+G+ + E A +LPG +W + + D +V+SF+ T
Sbjct: 423 LYAACGRGPRSTMRVLRHGLEVSEMAVSELPGNPSAVWTVKKRADDEYDAYIVVSFINAT 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++Q+ P I + RV+ W
Sbjct: 483 LVLSI-GETVEEVTDSGFLGTTPTLACHQIGHDALVQIYPEGIRHIRADR--RVNEWRTS 539
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K I + N+ QV+ A TG ++ Y E+ S ++ + A R + +V C+ + + E
Sbjct: 540 GKKLIVKCAVNQRQVVIALTGGELIYFEMDSSGQLNEYAERKEMNSDVLCMALGSVPAGE 599
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGG--EIIPRSI----LMTCF--- 412
+ + AVG +D + ++SL + + G E P S+ L CF
Sbjct: 600 Q-----RTKFLAVG-SSDGTVHVISLDPKSCLSILSVQGMTESNPESLAIVELKACFLPS 653
Query: 413 -----EGH--------CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
GH YL + L +G + LD +G ++D + LG++ L +
Sbjct: 654 ISVDMSGHEEGSGSSALYLNIGLQNGILKRMVLDAVTGDMSDTRTRFLGSRSVKLFKIKM 713
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
T V A S R + Y ++ + ++ + + +E P+ + +T
Sbjct: 714 QGTDAVLAMSSRCWLSYLFQNRFHLTPLSYDSLEYASGFCSEQCPEGIVAIAGNTLRILA 773
Query: 520 IDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITT 554
++++ + + + PL PR + SQ VI T
Sbjct: 774 LEKLGAVFNQLSAPLSFTPRSFVIDKKSQKLIVIET 809
Score = 59.7 bits (143), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 67/127 (52%), Gaps = 4/127 (3%)
Query: 1088 SMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSL 1146
+MC F ++L + +R++++ +K LR E H N+I V G+ I+VGD+ S
Sbjct: 957 AMCNFGNRVLIGVGRCLRIYDFGKKKMLRKCENKHIPNLIVTINAV-GNRIVVGDVQESF 1015
Query: 1147 TLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ--KDSAATSDED 1204
++Y+ +E + D+ P W T+ ++D +G + N++I + +++ DED
Sbjct: 1016 FFIRYRMLENQLIIFADDFTPRWTTAACMVDYRTVVGGDKFGNVYILRLPGNTSDDVDED 1075
Query: 1205 RTHLQEV 1211
T ++ +
Sbjct: 1076 PTGVRSL 1082
>gi|302916981|ref|XP_003052301.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733240|gb|EEU46588.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1212
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 128/549 (23%), Positives = 220/549 (40%), Gaps = 72/549 (13%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF L ++ E DG T VK K++ +
Sbjct: 297 MHKLKG--SAGAFF------FLLQTEDGDLFKLSIDMVEDEDGNPTGEVKRLKIKYFDTV 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN---------------GTY------- 157
+ L L +G ++V S+ G+ + + D++ +Y
Sbjct: 349 PVASSLCILKSGFLYVASQFGNYSFYQFEKLGDDDEELEFISDDFPADPRASYDPVYFHP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
++++ES + P++D V +L + Q+ T G + R++++G+ + E
Sbjct: 409 RPTENLALVESIPAMNPLLDCKVANLTGEDAPQIYTICGNGARSTFRMLKHGLEVNEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPGI +W L + + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGIPSAVWTLKLNRSEQYDAYIVLSFTNGTLVLSI-GETVEEVSDSGFLTSVPTLAA 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I ++ W P +SI S N +QV A +G VY+
Sbjct: 528 QLLGEDGLIQVHPKG---IRHVRNGHINEWAAPQHRSIVAASANAHQVAIALSSGEIVYF 584
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V CL + + ++ AVG D + R+LSL
Sbjct: 585 EMDADGSLAEYDEKKEMFGTVTCLSLGDVPEGRL-----RSSFLAVGC-DDCTVRILSLD 638
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRL 439
+LE + L P S+ + E YL + L G LD +G L
Sbjct: 639 PDSTLENKSVQALTAA--PTSLAIIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGEL 696
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCS 497
TD ++ LG + L T V S RP + Y V + +N + +
Sbjct: 697 TDTRQKFLGPKEVRLFQVTVQGKTCVLGLSSRPWLGYPDPITKGFVVTPLNYVDLEWGWN 756
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHI-RTVPLGEAPRRIAYQESSQTFGVITTRI 556
++E + + + ID + I +++PL P+++ F I
Sbjct: 757 FSSEQCEEGIVGIQGQSLRIFNIDRLGDTLIQKSIPLTYTPKKLVKHPEQPLFYTI---- 812
Query: 557 DIQEADGST 565
EAD +T
Sbjct: 813 ---EADNNT 818
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 105/218 (48%), Gaps = 17/218 (7%)
Query: 1016 EILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHY-D 1070
++L E A+S F +D + V+GT +V+P+ +G + I+ + +
Sbjct: 870 QVLQTVHFENNEAAVSATVVSFASQDNENFLVVGTGKDMIVNPQSY--SEGYLYIYRFVE 927
Query: 1071 DGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALF 1129
DG+ L+ I + +I+ ++ F GK+ ++ + +R+++ + LR + + +
Sbjct: 928 DGRELEFIHKTKIEEPPLALLPFQGKVAVAVGTQLRIYDLGMRQMLRKAQAEVSAQRIVS 987
Query: 1130 LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYN 1189
L +G I+VGD+ + +TL+ YK+ + D W T ++D E G + N
Sbjct: 988 LNTQGSRIVVGDVQQGVTLVVYKSATNKLIPFADDTVARWTTCTTMVDYESIAGGDKFGN 1047
Query: 1190 LFI--CQKDSAATSDEDRTHLQEV-------GTVHLVG 1218
+FI C + ++ +DE+++ L + GT H +G
Sbjct: 1048 MFIVRCPEKASEEADEEQSGLHLINARDYLHGTPHRLG 1085
>gi|156406895|ref|XP_001641280.1| predicted protein [Nematostella vectensis]
gi|156228418|gb|EDO49217.1| predicted protein [Nematostella vectensis]
Length = 1171
Score = 106 bits (265), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 210/501 (41%), Gaps = 60/501 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G +F + LE +E M V E +++ + + L G +F S G+
Sbjct: 301 FLVQTEQGDIFKITLETDEDM-----VTEIRMKYFDTVPPAVSMCVLKTGFLFTASEFGN 355
Query: 142 SQLVKLNRSPDENGT--YVSVME---------------------SFTNLAPIIDMVVVDL 178
L ++ D++ + S ME +LAPI++ + DL
Sbjct: 356 HYLYQIAHLGDDDDELEFSSTMELEEGTTFFFQPRGLKNLVLVDELESLAPIMNCQIADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G SLR++R+G+ + E A +LPG +W + + D +V
Sbjct: 416 ANEDTPQLFAACGRGSRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKHTTADEFDAYIV 475
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SF+ T VL++ G VEE GF T C + ++Q+ P I + R
Sbjct: 476 VSFINATLVLSI-GETVEEVTDSGFLGTTPTLSCSQLGEEALVQIYPDGIRHIRADK--R 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDI 354
V+ W+ P K+I + N+ QV+ A TG +V Y E+ S ++ + R + +V C+ +
Sbjct: 533 VNEWKAPGKKTIVKSAVNERQVVIALTGGEVVYFEMDSSGQLNEYTERKEMSADVQCMAL 592
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEG 414
+ + E +++ A+GL +D + R++SL + C PL + +P E
Sbjct: 593 GTILHGEL-----RSRFLAIGL-SDNTVRIISLDPQD--CLTPLSMQALP-----AMPES 639
Query: 415 HCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTV 474
C + + +G+ + G + +G L +L V A S R +
Sbjct: 640 LCIVEMGGKEGA-------ESEGGSMGGLFLNIGLSEICL----TLEPGEVLAMSSRSWL 688
Query: 475 IYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIR-TVPL 533
Y+ ++ + ++ + + ++E P+ + +T ++++ + + PL
Sbjct: 689 SYTHQSRVHLTPLSYETLEYASGFSSEQCPEGIVAIAGNTLRILALEKLGAVFNQVATPL 748
Query: 534 GEAPRRIAYQESSQTFGVITT 554
PR+ + T VI T
Sbjct: 749 KYTPRKFVIHSPTNTLVVIET 769
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPN-TYFVLGTA---VVHPEENE 1058
E H+++ +DQN E A S+ F P+ T+ ++GTA + P
Sbjct: 842 ETHDVVQLDQN-------------EAAFSVCVCSFSARPDDTFVIVGTAKDMALSPRSCS 888
Query: 1059 PK---QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKEL 1115
R++ KL+ + E+ ++ F G+LLA I +R+++ +K L
Sbjct: 889 TGYLYAYRLVQQPSGGIKLEFQHKTEVDDVPAALEPFQGRLLAGIGRLLRVYDIGKKKML 948
Query: 1116 R-LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIE 1174
R E N I + G I+V D+ S ++YK + + D NP W+T
Sbjct: 949 RKCENKKLPNFIC-NINSMGTRIVVSDIQESFHFVKYKPRDNQLVVFADDVNPRWLTCCC 1007
Query: 1175 ILDDELFLGAENSYNLFICQKDSAATSDED 1204
LD + GA+ N+F + S ++ D D
Sbjct: 1008 YLDYDTLAGADKFGNIFTVRLPSGSSDDVD 1037
>gi|154277742|ref|XP_001539706.1| hypothetical protein HCAG_05173 [Ajellomyces capsulatus NAm1]
gi|150413291|gb|EDN08674.1| hypothetical protein HCAG_05173 [Ajellomyces capsulatus NAm1]
Length = 1233
Score = 106 bits (265), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 180/436 (41%), Gaps = 49/436 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + L+ E +G T V K++ + I L L +G +FV S
Sbjct: 306 FLLQTEDGDLFKVTLDMVEDDNGQITGEVSRLKLKYFDTVPIASSLCILKSGFLFVASET 365
Query: 140 GDS---QLVKLNRSPDE----NGTY--------------------VSVMESFTNLAPIID 172
G+ Q KL DE + Y V+++ES +L P++D
Sbjct: 366 GNHHFYQFEKLGDDDDEIEFTSDAYSADLSEPLPPAYFRPRPYENVNLVESIDSLNPLMD 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+ +L Q+ T G S R +++G+ + E +LP + +W +
Sbjct: 426 CKIANLTDDDAPQIYTICGTGARSSFRTLKHGLEVAEIVESELPSVPSAVWTTKLTREDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIILSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + RA+
Sbjct: 545 ADR--RVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRAMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E A++ AVG D + R+LSL +LE + L
Sbjct: 603 VTCLSLG-----EVPRGRARSSFLAVGC-DDSTVRILSLDPESTLENKSVQALTSAPSAL 656
Query: 406 SILM----TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ T YL + L G LD +G L+D + LG +P L
Sbjct: 657 SIMAMSDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKE 716
Query: 462 TTNVFACSDRPTVIYS 477
T V A S RP + YS
Sbjct: 717 QTVVLALSSRPWLGYS 732
Score = 63.5 bits (153), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N+ ++ +L E A+S+ + F +D T+ V+GT VV+P I F
Sbjct: 864 NSKRVISQIELEENEAAVSVAAVPFSSQDDETFLVVGTGKDMVVNPRSCTAGFIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
+ +L+ I + ++ ++ F G+LLA I + +R+++ ++ LR + + +
Sbjct: 924 EEGKELEFIHKTMVEQPPMALLGFQGRLLAGIGTDLRIYDLGMKQMLRKCQASVVPHLVV 983
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ SLT + YK E D W T ++D E G +
Sbjct: 984 GLQTQGSRIIVSDVQESLTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFG 1043
Query: 1189 NLFI--CQKDSAATSDED 1204
NL++ C ++ +DED
Sbjct: 1044 NLWLLRCPAKASEEADED 1061
>gi|361131929|gb|EHL03544.1| putative Pre-mRNA-splicing factor rse1 [Glarea lozoyensis 74030]
Length = 967
Score = 106 bits (265), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 122/514 (23%), Positives = 202/514 (39%), Gaps = 52/514 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + +E E G T VK K++ + + L L +G +FV S
Sbjct: 120 FLLQTEDGDLFKITIEMVEDDQGQPTGEVKRLKIKYFDTVPVASSLCILKSGFLFVASEF 179
Query: 140 GDSQLVKLNR--SPDENGTYVS-------------------------VMESFTNLAPIID 172
GD Q + + DE +VS ++ES ++ P++D
Sbjct: 180 GDHQFYQFEKLGDDDEETEFVSDDFPTDPTEPYTPVYFHPRQAENLSLVESIDSMNPLMD 239
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
V +L Q+ + G + R +++G+ + E +LPG+ +W +
Sbjct: 240 CKVANLTNADAPQIYSICGTGARSTFRSLKHGLEVSEIVESELPGVPSAVWTTKLTQGDT 299
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + ++QV P I
Sbjct: 300 YDAYIILSFSNGTLVLSI-GETVEEVTDTGFLSTASTLAVQQLGEDGLIQVHPKGIRHIR 358
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + + +
Sbjct: 359 ADR--RVNEWAAPQHRSIVAATTNERQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMSGT 416
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + + ++ AVG D + R+LSL +LE + L
Sbjct: 417 VTCLSLGDVPEGRV-----RSPYLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 470
Query: 406 SILMTCFEGH----CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ YL + L G LD +G LTD + LG +P L
Sbjct: 471 SIMAMADSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELTDTRLRFLGPKPAKLFKVSVQG 530
Query: 462 TTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
T V A S RP + Y+ + + +N + + ++E + + +
Sbjct: 531 QTAVLALSSRPWLGYTDPVTKAFMLTPLNYPALEWGWNFSSEQCTEGMVGIQGQNLRIFS 590
Query: 520 IDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
I+++ L ++PL PRR F I
Sbjct: 591 IEKLTDNLLQESIPLTYTPRRFVRHPEQPLFYTI 624
Score = 46.2 bits (108), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 1079 EKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFIL 1138
E ++ ++ F G+LLA + +R+++ ++ LR + + + L+ +G I+
Sbjct: 692 EAAVEEPPMALLGFQGRLLAGVGKDLRIYDLGMKQLLRKSQAEVVPNLIVGLRTQGSRII 751
Query: 1139 VGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKD 1196
V D+ S+ ++ YK E D W + ++D E G + NL++ C
Sbjct: 752 VSDVQESVVMVVYKFQENRLIPFVDDTIARWTSCSTMVDYETVAGGDKFGNLWLLRCPAK 811
Query: 1197 SAATSDED 1204
++ +DE+
Sbjct: 812 ASEEADEE 819
>gi|42564075|ref|NP_187802.2| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
gi|29824376|gb|AAP04148.1| unknown protein [Arabidopsis thaliana]
gi|110739103|dbj|BAF01468.1| hypothetical protein [Arabidopsis thaliana]
gi|332641608|gb|AEE75129.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
Length = 1379
Score = 106 bits (264), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 133/567 (23%), Positives = 233/567 (41%), Gaps = 107/567 (18%)
Query: 118 EISIPECL---------TYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLA 168
++++ ECL +++ G + + + D + KL + M S N+A
Sbjct: 417 KVNLSECLYKGLPCKDILWIEGGFLATFAEMADGTVFKLGTEK------LHWMSSIQNIA 470
Query: 169 PIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEE--HACIDLPGIKGIWALSI 226
PI+D V+D + + + Q+ C G EGSLRIIR+GI +E+ GI G W + +
Sbjct: 471 PILDFSVMDDQNEKRDQIFACCGVTPEGSLRIIRSGINVEKLLKTAPVYQGITGTWTVKM 530
Query: 227 GSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSA 286
+ LVLSFV TRVL++ + + T+ GF SD TF CG V ++Q+ A
Sbjct: 531 KLTDVYHSFLVLSFVEETRVLSVGLSFKDVTDSVGFQSDVCTFACGLVADGLLVQIHQDA 590
Query: 287 AILISTESKAR----------VSSWEPPNGKSISVVSCNKNQVLCATG--CDVYYLEVHG 334
L A SSW P N SIS+ + +N ++ +T C + L V
Sbjct: 591 IRLCMPTMDAHSDGIPVSSPFFSSWFPEN-VSISLGAVGQNLIVVSTSNPCFLSILGVKS 649
Query: 335 -----SEIKQLAHRALEYEVACL-------------DISPLSNEETSSEPA--------- 367
EI ++ L+YEV+C+ D SP N ++ P+
Sbjct: 650 VSSQCCEIYEIQRVTLQYEVSCISVPQKHIGKKRSRDSSP-DNFCKAAIPSAMEQGYTFL 708
Query: 368 ----KAQLAAVGLWTD-ISARLLS--LPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLV 420
K + + D + R+L+ L SL + G IP+ + + + Y+L
Sbjct: 709 IGTHKPSVEVLSFTEDGVGVRVLASGLVSLTNTMGTVISG-CIPQDVRLVLVD-QLYVLS 766
Query: 421 ALGDGSMF-----------------YFS-----LDPASGRLTDKKKVTL--------GTQ 450
L +G + YFS +D G+ D V L G
Sbjct: 767 GLRNGMLLRFEWAPFSNSSGLNCPDYFSHCKEEMDTVVGK-KDNLPVNLLLIATRRIGIT 825
Query: 451 PTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALA 510
P L F +++ A SDRP ++ ++ L +++++ + H + + P +
Sbjct: 826 PVFLVPFSDSLDSDIIALSDRPWLLQTARQSLSYTSISFQPSTHATPVCSFECPQGILFV 885
Query: 511 TDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPS 570
+++ + ++ + + LG PR++ Y S+ +I R D+ + +
Sbjct: 886 SENCLHLVEMVHSKRRNAQKFQLGGTPRKVIYHSESKL--LIVMRTDLYDT-------CT 936
Query: 571 ASTQAQNTTSSTISSLSYIKPGSTKQS 597
+ + S ++ S +KPG T +S
Sbjct: 937 SDICCVDPLSGSVLSSYKLKPGETGKS 963
Score = 41.6 bits (96), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLRIIR+GI +E+ GI G W + + + LVLSFV TRVL++
Sbjct: 497 EGSLRIIRSGINVEKLLKTAPVYQGITGTWTVKMKLTDVYHSFLVLSFVEETRVLSV 553
>gi|30681985|ref|NP_850565.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
gi|332641609|gb|AEE75130.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
Length = 1329
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 130/567 (22%), Positives = 230/567 (40%), Gaps = 107/567 (18%)
Query: 118 EISIPECL---------TYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLA 168
++++ ECL +++ G + + + D + KL + M S N+A
Sbjct: 359 KVNLSECLYKGLPCKDILWIEGGFLATFAEMADGTVFKLGTEK------LHWMSSIQNIA 412
Query: 169 PIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEE--HACIDLPGIKGIWALSI 226
PI+D V+D + + + Q+ C G EGSLRIIR+GI +E+ GI G W + +
Sbjct: 413 PILDFSVMDDQNEKRDQIFACCGVTPEGSLRIIRSGINVEKLLKTAPVYQGITGTWTVKM 472
Query: 227 GSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSA 286
+ LVLSFV TRVL++ + + T+ GF SD TF CG V ++Q+ A
Sbjct: 473 KLTDVYHSFLVLSFVEETRVLSVGLSFKDVTDSVGFQSDVCTFACGLVADGLLVQIHQDA 532
Query: 287 AILISTESKAR----------VSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHG-- 334
L A SSW P N SIS+ + +N ++ +T + +L + G
Sbjct: 533 IRLCMPTMDAHSDGIPVSSPFFSSWFPEN-VSISLGAVGQNLIVVSTS-NPCFLSILGVK 590
Query: 335 ------SEIKQLAHRALEYEVACL-------------DISPLSNEETSSEPA-------- 367
EI ++ L+YEV+C+ D SP N ++ P+
Sbjct: 591 SVSSQCCEIYEIQRVTLQYEVSCISVPQKHIGKKRSRDSSP-DNFCKAAIPSAMEQGYTF 649
Query: 368 -----KAQLAAVGLWTD-ISARLLS--LPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLL 419
K + + D + R+L+ L SL + G IP+ + + + Y+L
Sbjct: 650 LIGTHKPSVEVLSFTEDGVGVRVLASGLVSLTNTMGTVISG-CIPQDVRLVLVD-QLYVL 707
Query: 420 VALGDGSMFYFSLDPASGR---------------------LTDKKKVTL--------GTQ 450
L +G + F P S D V L G
Sbjct: 708 SGLRNGMLLRFEWAPFSNSSGLNCPDYFSHCKEEMDTVVGKKDNLPVNLLLIATRRIGIT 767
Query: 451 PTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALA 510
P L F +++ A SDRP ++ ++ L +++++ + H + + P +
Sbjct: 768 PVFLVPFSDSLDSDIIALSDRPWLLQTARQSLSYTSISFQPSTHATPVCSFECPQGILFV 827
Query: 511 TDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPS 570
+++ + ++ + + LG PR++ Y S+ +I R D+ + +
Sbjct: 828 SENCLHLVEMVHSKRRNAQKFQLGGTPRKVIYHSESKL--LIVMRTDLYDT-------CT 878
Query: 571 ASTQAQNTTSSTISSLSYIKPGSTKQS 597
+ + S ++ S +KPG T +S
Sbjct: 879 SDICCVDPLSGSVLSSYKLKPGETGKS 905
Score = 41.6 bits (96), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLRIIR+GI +E+ GI G W + + + LVLSFV TRVL++
Sbjct: 439 EGSLRIIRSGINVEKLLKTAPVYQGITGTWTVKMKLTDVYHSFLVLSFVEETRVLSV 495
>gi|367050506|ref|XP_003655632.1| hypothetical protein THITE_2119532 [Thielavia terrestris NRRL 8126]
gi|347002896|gb|AEO69296.1| hypothetical protein THITE_2119532 [Thielavia terrestris NRRL 8126]
Length = 1211
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 127/548 (23%), Positives = 225/548 (41%), Gaps = 71/548 (12%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E +G T V+ K++ I
Sbjct: 297 MHKLKG--SAGAFF------FLLQTDDGDLFKVTIDMVEDSEGNPTGEVRRLKIKYFDTI 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDE-------------------NGTY--- 157
I L L +G +F S G+ + + D+ N Y
Sbjct: 349 PIAHSLCILKSGFLFAASEFGNHHFYQFEKLGDDDEEPEFTSDDFPTDPRASYNPVYFHP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
++++ES ++ P++D V +L + Q+ G + R++++G+ + E
Sbjct: 409 RPLENLALVESLNSMNPLVDCKVANLTGEDAPQIYAVCGNRARSTFRMLKHGLEVSEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPG +W + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGTPSAVWTTKLTKYDEYDGYIVLSFTNATLVLSI-GETVEEVTESGFLTSVPTLAV 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I + RV+ W P +SI + N++QV+ A +G VY+
Sbjct: 528 QQLGEEGLIQVHPKG---IRHIVQGRVNEWPAPQHRSIVAAATNESQVVIALSSGEIVYF 584
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V L + + T ++ AVG D + R+L L
Sbjct: 585 EMDADGSLAEYDEKKEMSGTVTSLSLGKVPEGLT-----RSSFLAVGC-DDCTVRILGLD 638
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC-----YLLVALGDGSMFYFSLDPASGRLT 440
+LE + L P S+ + E YL + L G LD +G LT
Sbjct: 639 PESTLEMKSIQALTSA--PSSLSIMSMEDSTGGNTLYLHIGLHSGVYLRTVLDEVTGELT 696
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCSL 498
D + LG +PT L + V A S RP + Y + V + ++ ++ + +
Sbjct: 697 DTRSKFLGPKPTKLFQVSVQNQPCVLALSSRPWLGYMDPLSKNFVMTPLSYAELEYGWNF 756
Query: 499 NAESYPDSLALATDSTFTFGTIDEIQKLHI-RTVPLGEAPRRIAYQESSQTFGVITTRID 557
++E + + + TI+++ + I +++PL P+R+ F I
Sbjct: 757 SSEQCLEGMVGIHANFLRIFTIEKLGETMIQKSIPLTYTPKRLVKHPEQPYFYTI----- 811
Query: 558 IQEADGST 565
EAD +T
Sbjct: 812 --EADNNT 817
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Query: 1029 ALSLISSKFGEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGA 1085
A+ +S+ GE ++ ++GT V++P + + FH D L+ I + ++
Sbjct: 886 AVVPFASQEGE---SFLIVGTGKDMVLNPRQFTEGYIHVYRFHEDGRSLEFIHKTRVEEP 942
Query: 1086 CYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRS 1145
++ F G+LLA I T+R+++ + LR + + L+ +G+ I+VGD+ +
Sbjct: 943 PMALIPFQGRLLAGIGKTLRVYDLGLRQLLRKAQGEVAQQLIVSLQTQGNRIVVGDVQQG 1002
Query: 1146 LTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDED 1204
+T + YK D W T I ++D E G + NL+I + A+ + D
Sbjct: 1003 VTYVVYKPESNKLIPFVDDTINRWTTCITMVDYESVAGGDRFGNLWIVRAPERASQESD 1061
>gi|301110252|ref|XP_002904206.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
gi|262096332|gb|EEY54384.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
Length = 1197
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 200/495 (40%), Gaps = 64/495 (12%)
Query: 91 LFMLLLEKE----EKMDGTFS---VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQ 143
LF +LL+ E K+ +S V+E K++ I + + G++F S +
Sbjct: 292 LFFVLLQSELGDLYKISLDYSGNVVEEIKIQFFDTIPVASSMCITKTGLLFCASEFSNHY 351
Query: 144 LVK---------------LNRSPDENGTYVSVMESFTNLA---------PIIDMVVVDLE 179
L + L P E T+ + TNLA P+ ++V DL
Sbjct: 352 LFQFLSIGEGDDAAKCSSLAMDPTEFSTFP--LRKLTNLALASSSASLSPVTQLLVDDLA 409
Query: 180 RQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVL 238
+ Q+ G SLR++R+G+ I E A LPG+ K +W L D +V+
Sbjct: 410 NEQTPQMYALCGNNNRSSLRVLRHGLPITEMAASALPGVAKAVWCLKESYADPYDKYIVV 469
Query: 239 SFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARV 298
SF T VL + G VEE GF D + ++ + LQ+ + + V
Sbjct: 470 SFEDATLVLEV-GETVEEVAQSGFLRDHGSLLVALLEDDSKLQIHTNG--IRHVPKFQPV 526
Query: 299 SSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDISP 356
+ W+ P K I + N QV+ + G ++ Y E+ S E+ + L +EV LD+
Sbjct: 527 TEWKAPGKKVIEHCAANSRQVVISLAGGEIIYFELGQSGELAEKGKLDLGFEVCSLDLG- 585
Query: 357 LSNEETSSEPAKAQLAAVGLWTDISARLLSL-PSLEEVCKEPLGGEIIPRSILMTCFEGH 415
E + Q AVG W D + R+LSL P+ K L P ++ + +
Sbjct: 586 ----EVPEGRQRFQFMAVGSW-DNTVRILSLDPNELFRQKSTLALTSHPHTLCLAQLQNE 640
Query: 416 ------------CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTT 463
+L + L +G + +DP + L D + LGT P L
Sbjct: 641 PSTPDSEHSSQALFLSIGLDNGVLQQSLIDPITATLADSRSRFLGTNPVKLFRVAVEGKR 700
Query: 464 NVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI 523
++ A S R + Y + + ++ +++ S N+E P + T+ T+D++
Sbjct: 701 SILALSSRAWISYFHQTRRHLTPLSCELLSYASSFNSEQCPGGIVALTNEGMKILTVDQL 760
Query: 524 ------QKLHIRTVP 532
QK ++R P
Sbjct: 761 GDTFNQQKCNLRYTP 775
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 8/202 (3%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAV----VHPEENEPKQGRI 1064
IID + + + +L E A S+ + F + F++ V +HP++ P G +
Sbjct: 850 IIDPASCQTVVCEELDVDERARSIAACVFHDRGGEAFIIVGTVKKMQLHPQK-APAGGYL 908
Query: 1065 IIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHF 1122
++ +G +L + EI ++MCEF G+LL S+ +R+++ +K LR E +F
Sbjct: 909 RVYRVVEGMQLVLVHTTEIDDIPHAMCEFQGRLLVSVGRALRIYDLGKKKMLRKCENRNF 968
Query: 1123 NNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFL 1182
+I+ + LK GD I D+ S ++YK E + D P ++TS +LD +
Sbjct: 969 PSIL-VELKAAGDRIYASDMHESFHFVKYKKDENQLVIFADDCVPRFITSSVLLDYDTLC 1027
Query: 1183 GAENSYNLFICQKDSAATSDED 1204
GA+ N+F+ + S + + D
Sbjct: 1028 GADKFGNVFVSRLPSEVSDEID 1049
>gi|167522323|ref|XP_001745499.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775848|gb|EDQ89470.1| predicted protein [Monosiga brevicollis MX1]
Length = 1172
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/498 (22%), Positives = 208/498 (41%), Gaps = 59/498 (11%)
Query: 82 YLLGDLAGRLFML-LLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
+LL G LF L ++ E+++ G ++ + + + + L G++F+ S G
Sbjct: 266 FLLQTEEGDLFKLTMVHDEDEVQGMI------LKYFDTVPVAKSMVLLKIGLLFIASEHG 319
Query: 141 DSQLVK-------------LNRSPDENGTY--------VSVMESFTNLAPIIDMVVVDLE 179
D QL + L+ P++ Y ++ ++ +LAP++D + D
Sbjct: 320 DHQLYQIAQLGDNKDEPSFLSTEPEDKVLYFRPRPLLNLAPLDVIESLAPVMDCQLADAG 379
Query: 180 RQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVL 238
+Q QL G SLR++R+G+ + A LPG +W++ D +V+
Sbjct: 380 QQDGPQLYALCGRGSGSSLRVLRHGLEVSAMAESPLPGNPSAVWSVKRHVEDEADTYIVM 439
Query: 239 SFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARV 298
SFV T VL + G VEE GF T + +LQ+ A + R+
Sbjct: 440 SFVDATLVLGI-GETVEEVTDSGFLGSVATLSASRIGDDALLQI--HAMGIRHILHDGRI 496
Query: 299 SSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYEVACLDIS 355
+ W+ P+ IS + N+ Q + A G VY+ L+ G I+ + +V L ++
Sbjct: 497 NEWKAPDRTKISHCAVNERQAVVALSNGELVYFELDRSGQLIEHSERVEMSSQVTALALA 556
Query: 356 PLSNEETSSEPAKAQLA---AVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF 412
P+ P AQ A A+GL D + RL+SL + C PL + +P + C
Sbjct: 557 PI--------PEGAQTARFLALGL-DDQTVRLMSLDKSD--CLAPLSMQALPGAAASLCM 605
Query: 413 ---------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTT 463
L + LG+G + +D + L+D + LG + L +
Sbjct: 606 VEVRGTHGEPSGLSLAIGLGNGVLMRSRVDTLTADLSDTRTRYLGARAVKLFPVKVAEEP 665
Query: 464 NVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI 523
V A S +P + Y + ++ + + + +++ P+ +A +T +++
Sbjct: 666 AVLALSTKPWLSYRYQGHSRITPLSYDALEYASAFSSDQCPEGVAAVAGNTLRIFAFEKL 725
Query: 524 -QKLHIRTVPLGEAPRRI 540
Q H ++PL RR+
Sbjct: 726 GQVFHQNSIPLEYTGRRL 743
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 78/193 (40%), Gaps = 21/193 (10%)
Query: 1027 EYALSLISSKFGEDPNTYFVLGTAVV--HPEENEPKQGRIIIFHYDDGKLQQIAEKEIKG 1084
E +SL +F PN ++ V P++ ++ F ++ + + G
Sbjct: 842 EMVMSLARVRFASSPNDKHIVAGVVKGWKPKQQSMDGAFLLTFQVQGDQVVLLHRTAVDG 901
Query: 1085 AC-YSMCEFNGKLLASINSTVRLFEW--------TNEKELRLECSHFNNIIALFLKVKGD 1135
++ EF GK+LA + +T+R+F+ T ++L + H + G
Sbjct: 902 GLPCALAEFAGKVLAGVGNTLRIFDLGKKKLLLKTENRQLPSQVVHITTM--------GT 953
Query: 1136 FILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQK 1195
I D S L+YK E + + D NP W T +LD + GA+ N + +
Sbjct: 954 RICAADQKHSFVWLKYKPAENALTIFADDTNPRWCTRGVLLDYQTVAGADKFGNFVVARL 1013
Query: 1196 DSAATS--DEDRT 1206
+ T D+D T
Sbjct: 1014 GTDLTDQIDDDPT 1026
>gi|357147370|ref|XP_003574320.1| PREDICTED: splicing factor 3B subunit 3-like [Brachypodium
distachyon]
Length = 1228
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 118/516 (22%), Positives = 222/516 (43%), Gaps = 64/516 (12%)
Query: 91 LFMLLLEKEE----KMD---GTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQ 143
LF LL+ E K+D SV E +++ I + + L +G +F S G+
Sbjct: 305 LFFFLLQTEYGDIFKVDLEHNGDSVSELRIKYFDTIPVASAICVLRSGFLFAASEFGNHA 364
Query: 144 LVK---LNRSPDENGTYVSVMES----------------------FTNLAPIIDMVVVDL 178
L + + R D + ++ME+ +L PI+DM + +L
Sbjct: 365 LYQFRDIGRDVDVESSSATLMETEEGFQPVFFQPRALKNLVRIDEIESLMPIMDMRIANL 424
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK-GIWALSIGSPKNLDNTLV 237
+ Q+ T G ++RI+R G+ I E A LP +W + D +V
Sbjct: 425 FDEETPQVYTACGRGSRSTMRILRPGLAISEMARSMLPAEPIAVWTVKKNINDMFDAYIV 484
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SF T VL++ G +EE F + + +++QV P+ I + R
Sbjct: 485 VSFANVTLVLSI-GETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHIRED--GR 541
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDIS 355
V+ W P K+I+ V N+ QV+ A +G ++ Y E+ + ++ ++ + + +VACL I+
Sbjct: 542 VNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAIA 601
Query: 356 PLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILM--- 409
P+ +++ AVG + D + R+LSL + C +PL + + P S+L
Sbjct: 602 PVPEGRQ-----RSRFLAVGSY-DNTIRILSLDP--DDCLQPLSVQSVSSAPESLLFLEV 653
Query: 410 ---------TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
+ + +L L +G +F ++D +G+L+D + LG +P L
Sbjct: 654 QASVGGEDGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVS 713
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTFGT 519
+ S RP + Y + + ++ + S +++ + +A+A D+ F T
Sbjct: 714 HRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIF-T 772
Query: 520 IDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
I+ + + + +PL PR+ + VI +
Sbjct: 773 IERLGETFNETAIPLRYTPRKFVILPKKKYLAVIES 808
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ-- 1061
V + I+D + + +L E A+S+ + F D +L + PK+
Sbjct: 874 VSCIRILDPRSRDTTCLLELQDNEAAVSICTVNF-HDKEHGTLLAVGTTKGLQFWPKRSL 932
Query: 1062 --GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR- 1116
G I I+ + D+GK L+ + + +++ S+C+F G+LLA + S +RL++ K LR
Sbjct: 933 ASGFIHIYKFVDEGKSLELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLYDLGKRKLLRK 992
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
E F I + + D I VGD+ S +Y+ E + D P W+T+ +
Sbjct: 993 CENKLFPRTI-VSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHI 1051
Query: 1177 DDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
D + GA+ N++ + +D + +ED T
Sbjct: 1052 DFDTMAGADKFGNIYFARLPQDLSDEIEEDPT 1083
>gi|19115326|ref|NP_594414.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|73919127|sp|Q9UTT2.1|RSE1_SCHPO RecName: Full=Pre-mRNA-splicing factor prp12; AltName:
Full=Pre-mRNA-processing protein 12; AltName:
Full=Spliceosome-associated protein 130
gi|6451681|dbj|BAA86918.1| Prp12p/SAP130 [Schizosaccharomyces pombe]
gi|7981404|emb|CAB92100.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
pombe]
Length = 1206
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 199/501 (39%), Gaps = 55/501 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
YLL G L L +E DG +V E +++ + + L L G +FV + G+
Sbjct: 319 YLLQTGDGDLLKLTIEH----DGQGNVVELRLKYFDTVPLAVQLNILKTGFLFVATEFGN 374
Query: 142 SQLVKLNR-----------------SPDENGTY-----------VSVMESFTNLAPIIDM 173
QL + +E GT +S++E +L + D
Sbjct: 375 HQLYQFENLGIDDDELEITSLDFQAQDNEVGTKNVHFGVRGLQNLSLVEEIPSLYSLTDT 434
Query: 174 VVVDLERQGQG-QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK-GIWALSIGSPKN 231
+++ G+ QL T G SLR +R G+ E +LPG IW L +
Sbjct: 435 LLMKAPSSGEANQLYTVCGRGSNSSLRQLRRGLETTEIVASELPGAPIAIWTLKLNQTDV 494
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D+ ++LSF T VL++ G VEE GF S T + +++Q+ P I
Sbjct: 495 YDSYIILSFTNGTLVLSI-GETVEEISDSGFLSSVSTLNARQMGRDSLVQIHPKGIRYI- 552
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLE----VHGSEIKQLAHR-AL 345
+ + S W+ P + + N Q++ A + ++ Y E V G ++ + R L
Sbjct: 553 -RANKQTSEWKLPQDVYVVQSAINDMQIVVALSNGELVYFEMSDDVEGGQLNEYQERKTL 611
Query: 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEI 402
V L + P+ +E S LA D + R+LSL +LE + + L
Sbjct: 612 TANVTSLALGPV--QEGSRRSNFMCLAC----DDATVRVLSLDLYTTLENLSVQALSSPA 665
Query: 403 IPRSILMTCFEG--HCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
I+ G YL + L +G +D SG+L D + LG + +
Sbjct: 666 NSLCIIPMNVNGVSTLYLHIGLMNGVYLRTVIDVTSGQLLDTRTRFLGPRAVKIYPITMK 725
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTI 520
+ V A S R + YS L S + ++H S +E P+ + +T T+
Sbjct: 726 NQNTVLAVSSRTFLAYSYQQNLQLSPIAYSAIDHASSFASEQCPEGIVAIQKNTLKIFTV 785
Query: 521 DEIQ-KLHIRTVPLGEAPRRI 540
D +Q L PL PR+I
Sbjct: 786 DSLQDDLKSDIYPLICTPRKI 806
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAV-VHPEENEPKQG--RII 1065
+ D + +I+H L E A S+ ++ F + V G+A + E G R+
Sbjct: 859 VFDMISKKIIHESPLGDNEAAFSMTAAFFKNRDEFFLVAGSATNMDLECRTCSHGNFRVY 918
Query: 1066 IFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNI 1125
FH + KL+ I+ EI G ++ F G++LA + +R+++ N+K LR +
Sbjct: 919 RFHDEGKKLELISHTEIDGIPMALTPFQGRMLAGVGRFLRIYDLGNKKMLRKGELSAVPL 978
Query: 1126 IALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAE 1185
+ V+ I+V D S+ + YK + + D W T+ ++D + G +
Sbjct: 979 FITHITVQASRIVVADSQYSVRFVVYKPEDNHLLTFADDTIHRWTTTNVLVDYDTLAGGD 1038
Query: 1186 NSYNLFI--CQKDSAATSDEDRT 1206
N+++ C + + +DE+ +
Sbjct: 1039 KFGNIWLLRCPEHVSKLADEENS 1061
>gi|171685748|ref|XP_001907815.1| hypothetical protein [Podospora anserina S mat+]
gi|170942835|emb|CAP68488.1| unnamed protein product [Podospora anserina S mat+]
Length = 1235
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 193/455 (42%), Gaps = 57/455 (12%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + L+ E +G T VK K++ I
Sbjct: 300 MHKLKG--SAGAFF------FLLQTEDGDLFKVTLDMVEDDNGNPTGEVKRLKIKYFDTI 351
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDE-------------------NGTY--- 157
I L L +G +FV S G+ L + + D+ N Y
Sbjct: 352 PIATSLCILKSGFLFVASEFGNHSLYQFEKLGDDDEELEFSSEEFPTDSRAAYNPVYFQP 411
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
++++ES ++ P ID V +L + Q+ + G S R++++G+ + E
Sbjct: 412 RPLENLTLVESIDSMNPQIDCKVANLTGEDAPQIYSVCGNGARSSFRMLKHGLEVSEIVA 471
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPG +W + D +VLSF T VL++ G VEE GF + T
Sbjct: 472 SELPGTPAAVWTTKLTKYDEYDAYIVLSFTNATLVLSI-GETVEEVSDSGFLTTVPTLAV 530
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I + RV+ W P +SI + N+NQV+ A +G VY+
Sbjct: 531 QQLGEEGLIQVHPKG---IRHIVQGRVNEWPAPQHRSIVAAATNENQVVIALSSGEIVYF 587
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS LA + E++ ++ LS ++ AVG D + R+LSL
Sbjct: 588 EMDADGS----LAEYDEKKEMSGT-VTSLSLGRVPEGLRRSSFLAVGC-DDCTVRILSLD 641
Query: 388 --PSLEEVCKEPLGGEIIPRSILMT--CFEGHC-YLLVALGDGSMFYFSLDPASGRLTDK 442
+LE + L SI+ F G YL + L G LD +G LTD
Sbjct: 642 PESTLEMKSIQALTAAPASLSIMSMEDSFGGTTLYLHIGLHSGVYLRTVLDEVTGELTDT 701
Query: 443 KKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYS 477
++ LG +PT L V A + RP + Y+
Sbjct: 702 RQKFLGPKPTKLFQVSVQGRPCVLALNSRPWLGYT 736
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 5/193 (2%)
Query: 1027 EYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082
E A+S F +D ++ ++GT ++ P + + FH D L+ I + +I
Sbjct: 904 EAAISAAVVSFASQDGESFLIVGTGKDMILSPRQFSEGYIHVYRFHDDGRDLEFIHKTKI 963
Query: 1083 KGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDL 1142
+ ++ F G+LLA I T+R+++ ++ LR + + + L+ +G+ I+VGD+
Sbjct: 964 EEPPMALIPFQGRLLAGIGKTLRIYDLGLKQLLRKAQAEIAPQLIVSLQTQGNRIVVGDV 1023
Query: 1143 MRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSD 1202
+ +T YK + D W T ++D E G + N++I + A+ +
Sbjct: 1024 QQGITYAVYKPESNKLLAWADDTINRWTTCTAMVDYESVAGGDKFGNVWILRAPERASQE 1083
Query: 1203 EDRTHLQEVGTVH 1215
D E+ VH
Sbjct: 1084 SDEPG-SEIQLVH 1095
>gi|242060436|ref|XP_002451507.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
gi|241931338|gb|EES04483.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
Length = 1232
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 213/493 (43%), Gaps = 57/493 (11%)
Query: 107 SVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVK---LNRSPDENGTYVSVMES 163
+V E +++ I + + L +G +F S G+ L + + R D + ++ME+
Sbjct: 331 TVSELRIKYFDTIPVTSAVCVLRSGFLFAASEFGNHALYQFRDIGRDADVESSSATLMET 390
Query: 164 ----------------------FTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRII 201
+L P++DM V +L + QL T G +LRI+
Sbjct: 391 EEGFQPVFFQPRALKNLMRIDEIESLMPVMDMRVANLFDEETPQLFTACGRGPRSTLRIL 450
Query: 202 RNGIGIEEHACIDLPGIK-GIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
R G+ I E A LP +W + D +V+SF T VL++ G +EE
Sbjct: 451 RPGLAISEMARSMLPAEPIAVWTVKKNINDMFDAYIVVSFTNVTLVLSI-GETIEEVSDS 509
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
F + + +++QV P+ I + RV+ W P K+I+ V N+ QV+
Sbjct: 510 QFLDTTHSLAVTLLGEDSLMQVHPNGIRHIRED--GRVNEWRTPGKKTITKVGSNRLQVV 567
Query: 321 CA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWT 378
A +G ++ Y E+ + ++ ++ + + +VACL I+P+ +++ AVG +
Sbjct: 568 IALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPEGRQ-----RSRFLAVGSY- 621
Query: 379 DISARLLSLPSLEEVCKEPLGGEII---PRSILM------------TCFEGHCYLLVALG 423
D + R+LSL + C +PL + + P S+L + + +L L
Sbjct: 622 DNTIRILSLDP--DDCLQPLSVQSVSSAPESLLFLEVQASIGGEDGADYPANLFLNAGLQ 679
Query: 424 DGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLV 483
+G +F ++D +G+L+D + LG +P L + S RP + Y +
Sbjct: 680 NGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCVVSHRQAMLCLSSRPWLGYIHQGHFL 739
Query: 484 FSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIA 541
+ ++ + S +++ + +A+A D+ F TI+ + + + +PL PR+
Sbjct: 740 LTPLSCDTLESASSFSSDQCSEGVVAVAGDALRIF-TIERLGETFNETAIPLRYTPRKFV 798
Query: 542 YQESSQTFGVITT 554
+ VI +
Sbjct: 799 ILPKKKYIAVIES 811
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 104/213 (48%), Gaps = 13/213 (6%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLGTAVVHPEENEPKQ- 1061
V + I+D + + +L E A+S+ + F + + T +GTA + P++
Sbjct: 878 VSCIRILDPRSRDTTCLLELQENEAAVSICTVNFHDKEHGTLLAVGTA--KGLQFWPRRT 935
Query: 1062 ---GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR 1116
G I I+ + D+G+ L+ + + +++ ++C+F G+LLA + S +RL++ K LR
Sbjct: 936 LAGGFIHIYKFVDEGRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLR 995
Query: 1117 -LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
E F I + + D I VGD+ S +Y+ E + D P W+T+ +
Sbjct: 996 KCENKLFPRTI-VSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAAQH 1054
Query: 1176 LDDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
+D + GA+ N++ + +D + +ED T
Sbjct: 1055 IDFDTMAGADKFGNIYFARLPQDISDEIEEDPT 1087
>gi|145240731|ref|XP_001393012.1| pre-mRNA-splicing factor rse1 [Aspergillus niger CBS 513.88]
gi|134077536|emb|CAK96680.1| unnamed protein product [Aspergillus niger]
Length = 1209
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 121/514 (23%), Positives = 203/514 (39%), Gaps = 52/514 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L ++ E +G T VK K++ + + L L +G ++V S
Sbjct: 306 FLLQTEDGDLFKLTIDMVEDDNGQLTGEVKRLKIKYFDTVPLASSLLILKSGFLYVASEA 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++E+ +L P+ID
Sbjct: 366 GNHHFYQFEKLGDDDEEIEFTSESFSADPSVPCDPIYFRPRGAENLNLVETINSLNPLID 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
VV++ Q+ T SG S R +++G+ + E +LP + +W +
Sbjct: 426 SKVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRSDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++Q+ P I
Sbjct: 486 FDAYIILSFANGTLVLSI-GETVEEVTDTGFLSTAPTLAVQQLGEDSLIQIHPRGIRHIL 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDSDGSLAEYDERRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E ++ AVG D + R+LSL +LE + L
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTAAPSAL 656
Query: 406 SILMTCFEGH----CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
+I+ YL + L G LD +G L+D + LG++P L
Sbjct: 657 NIMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKG 716
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTFGT 519
T V S RP + YS F L V N +E + + +
Sbjct: 717 QTAVLGLSSRPWLGYSDVQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFS 776
Query: 520 IDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
I+++ + +++PL PRR F VI
Sbjct: 777 IEKLDNNMLQQSIPLSYTPRRFLKHPEQPLFYVI 810
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 1017 ILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDG 1072
++H +L E A+S+ + F +D T+ V+GTA V+P + I F D
Sbjct: 868 VVHTIELEENEAAISIAAVPFTSQDDETFLVVGTAKDMTVNPPGSAGGYIHIYRFQEDGR 927
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
+L+ I + +++ ++ F G+L+A I S +R+++ ++ LR + + L+
Sbjct: 928 ELEFIHKTKVEEPPLALLGFQGRLVAGIGSLLRIYDLGMKQLLRKCQAPVVPKTIVGLQT 987
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI 1192
+G I+V D+ S+T + YK E D W T+ ++D E G + NL++
Sbjct: 988 QGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDKFGNLWL 1047
Query: 1193 --CQKDSAATSDED 1204
C K ++ +DED
Sbjct: 1048 LRCPKKTSEEADED 1061
>gi|312370905|gb|EFR19207.1| hypothetical protein AND_22901 [Anopheles darlingi]
Length = 1287
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 123/574 (21%), Positives = 225/574 (39%), Gaps = 87/574 (15%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G +F + LE ++ + V E K++ + + L G +FV G+
Sbjct: 374 FLVQTEQGDIFKVTLETDDDV-----VSEIKLKYFDTVPPATAMCVLKTGFLFVACEFGN 428
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ NL API+ V DL
Sbjct: 429 HYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRQLKNLVMVDDIPSYAPILGCQVADL 488
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+ QL G S+R++R+G+ + E A +LPG +W + D ++
Sbjct: 489 ANEDTPQLYLACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYII 548
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SFV T VL++ G VEE GF + ++QV P I + R
Sbjct: 549 VSFVNATLVLSI-GDTVEEVTDSGFLVP--------LGDDALVQVYPDGIRHIRADK--R 597
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDI 354
V+ W+ P K+I + N+ QV+ A +G ++ Y E+ G + + + EV C+ +
Sbjct: 598 VNEWKAPGKKTIMKCAVNQRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSEVMCMAL 657
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-- 412
+ + E ++ AVGL D + R++SL + C P + +P + C
Sbjct: 658 GSVPSGEQ-----RSWFLAVGL-ADNTVRIISLDPSD--CLSPRSMQALPSAAESLCIVE 709
Query: 413 ---------------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQP 451
G YL + L +G + LDP SG L D + LG++P
Sbjct: 710 MGTVETAANDDDDDDDAPLKTSGCIYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRP 769
Query: 452 TVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALAT 511
L + + V A S R + Y ++ + ++ + + ++E + + +
Sbjct: 770 VKLFRIQMQGSEAVLAMSSRSWLSYYYQNRFHLTPLSYETLEYASGFSSEQCSEGIVAIS 829
Query: 512 DSTFTFGTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPS 570
+T ++++ + + + PL P+R A T ++ I E D + +
Sbjct: 830 TNTLRILALEKLGAVFNQISFPLEYTPKRFAIHAE-------TGKLIISETDHNAYTEET 882
Query: 571 ASTQAQNTTSSTISSLSYIKPGSTKQSTANQPAD 604
+ + + + G +Q AN+ AD
Sbjct: 883 KTVRKRQMADEMREA-----AGDDEQELANEMAD 911
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Query: 1022 QLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGR---IIIFHYDD--GKLQQ 1076
QL E LSL +F D Y V G A + PK G I ++ D+ +L+
Sbjct: 952 QLAQNEAVLSLALVRFAVDQKWYVVAGVA--KDLQINPKIGNGGFIDVYRVDNQTNELEH 1009
Query: 1077 IAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGD 1135
+ EI A ++C F G+LLA I +R+++ +K LR E H N I + ++ G
Sbjct: 1010 VHRTEIDDAPGALCAFQGRLLAGIGKVLRMYDLGKKKLLRKCENKHIPNQI-VNIQGMGQ 1068
Query: 1136 FILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQK 1195
+ V D+ S+ L+YK E + D +P W+TS +LD + + N+ + +
Sbjct: 1069 RVYVSDVQESVYCLKYKRPENQLIIFADDTHPRWVTSATLLDYDTVATGDKFGNIAVLRL 1128
Query: 1196 DSAATSDED 1204
+ + D D
Sbjct: 1129 PHSVSDDVD 1137
>gi|83767504|dbj|BAE57643.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1270
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 180/437 (41%), Gaps = 51/437 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L ++ E +G T VK K++ + + L L +G ++V S
Sbjct: 306 FLLQTEDGDLFKLNIDMVEDDNGQLTGEVKRLKIKYFDTVPVASSLLILKSGFLYVASEA 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++E+ +L P+ID
Sbjct: 366 GNHHFYQFEKLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSAENLNLVETINSLNPLID 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
V +L + Q+ T SG + R +++G+ + E +LP + +W +
Sbjct: 426 SKVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSELPSVPSAVWTTKLTRADE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++Q+ P I
Sbjct: 486 FDAYIILSFANGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHIM 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ G+ + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V CL + E ++ AVG D + R+LSL S++ + P
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTAAPSAL 656
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
I+ S + YL + L G LD +G L+D + LG++P L
Sbjct: 657 NIMSMSDSSSGGTA-LYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVK 715
Query: 461 STTNVFACSDRPTVIYS 477
T V A S RP + YS
Sbjct: 716 GQTAVLALSSRPWLGYS 732
>gi|413935524|gb|AFW70075.1| hypothetical protein ZEAMMB73_605375 [Zea mays]
Length = 1229
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 213/493 (43%), Gaps = 57/493 (11%)
Query: 107 SVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVK---LNRSPDENGTYVSVMES 163
+V E +++ I + + L +G +F S G+ L + + R D + ++ME+
Sbjct: 329 AVSELRIKYFDTIPVTSAVCVLRSGFLFAASEFGNHALYQFRDIGREADVESSSATLMET 388
Query: 164 ----------------------FTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRII 201
+L P++DM V +L + QL T G +LRI+
Sbjct: 389 EEGFQPVFFQPRALKNLMRIDEIESLMPVMDMRVANLFDEETPQLFTACGRGPRSTLRIL 448
Query: 202 RNGIGIEEHACIDLPGIK-GIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG 260
R G+ I E A LP +W + D +V+SF T VL++ G +EE
Sbjct: 449 RPGLAISEMARSMLPAEPIAVWTVKKNINDMFDAYIVVSFTNVTLVLSI-GETIEEVSDS 507
Query: 261 GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
F + + +++QV P+ I + RV+ W P K+I+ V N+ QV+
Sbjct: 508 QFLDTTHSLAVTLLGEDSLMQVHPNGIRHIRED--GRVNEWRTPGKKTITKVGSNRLQVV 565
Query: 321 CA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWT 378
A +G ++ Y E+ + ++ ++ + + +VACL I+P+ +++ AVG +
Sbjct: 566 IALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPEGRQ-----RSRFLAVGSY- 619
Query: 379 DISARLLSLPSLEEVCKEPLGGEII---PRSILM------------TCFEGHCYLLVALG 423
D + R+LSL + C +PL + + P S+L + + +L L
Sbjct: 620 DNTIRILSLDP--DDCLQPLSVQSVSSAPESLLFLEVQASVGGEDGADYPANLFLNAGLQ 677
Query: 424 DGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLV 483
+G +F ++D +G+L+D + LG +P L + S RP + Y +
Sbjct: 678 NGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVSHRQAMLCLSSRPWLGYIHQGHFL 737
Query: 484 FSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIA 541
+ ++ + S +++ + +A+A D+ F TI+ + + + +PL PR+
Sbjct: 738 LTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIF-TIERLGETFNETAIPLRYTPRKFV 796
Query: 542 YQESSQTFGVITT 554
+ VI +
Sbjct: 797 ILPKKKYIAVIES 809
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLGTAVVHPEENEPKQ- 1061
V + I+D + + +L E A+S+ + F + + T +GTA + P++
Sbjct: 875 VSCIRILDPRSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAIGTA--KGLQFWPRRT 932
Query: 1062 ---GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR 1116
G I ++ + D+G+ L+ + + +++ ++C+F G+LLA + S +RL++ K LR
Sbjct: 933 LAGGFIHVYKFVDEGRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLR 992
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
+ + + D I VGD+ S +Y+ E + D P W+T+ + +
Sbjct: 993 KCENKLFPRTLVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTTAQHI 1052
Query: 1177 DDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
D + GA+ N++ + +D + +ED T
Sbjct: 1053 DFDTMAGADKFGNIYFARLPQDISDEIEEDPT 1084
>gi|350630003|gb|EHA18376.1| hypothetical protein ASPNIDRAFT_38018 [Aspergillus niger ATCC 1015]
Length = 1219
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 121/514 (23%), Positives = 203/514 (39%), Gaps = 52/514 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L ++ E +G T VK K++ + + L L +G ++V S
Sbjct: 306 FLLQTEDGDLFKLTIDMVEDDNGQLTGEVKRLKIKYFDTVPLASSLLILKSGFLYVASEA 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++E+ +L P+ID
Sbjct: 366 GNHHFYQFEKLGDDDEEIEFTSESFSADPSVPCDPIYFRPRGAENLNLVETINSLNPLID 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
VV++ Q+ T SG S R +++G+ + E +LP + +W +
Sbjct: 426 SKVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRSDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++Q+ P I
Sbjct: 486 FDAYIILSFANGTLVLSI-GETVEEVTDTGFLSTAPTLAVQQLGEDSLIQIHPRGIRHIL 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDSDGSLAEYDERRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E ++ AVG D + R+LSL +LE + L
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTAAPSAL 656
Query: 406 SILMTCFEGH----CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
+I+ YL + L G LD +G L+D + LG++P L
Sbjct: 657 NIMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKG 716
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTFGT 519
T V S RP + YS F L V N +E + + +
Sbjct: 717 QTAVLGLSSRPWLGYSDVQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFS 776
Query: 520 IDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
I+++ + +++PL PRR F VI
Sbjct: 777 IEKLDNNMLQQSIPLSYTPRRFLKHPEQPLFYVI 810
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 1017 ILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDG 1072
++H +L E A+S+ + F +D T+ V+GTA V+P + I F D
Sbjct: 868 VVHTIELEENEAAISIAAVPFTSQDDETFLVVGTAKDMTVNPPGSAGGYIHIYRFQEDGR 927
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
+L+ I + +++ ++ F G+L+A I S +R+++ ++ LR + + L+
Sbjct: 928 ELEFIHKTKVEEPPLALLGFQGRLVAGIGSLLRIYDLGMKQLLRKCQAPVVPKTIVGLQT 987
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI 1192
+G I+V D+ S+T + YK E D W T+ ++D E G + NL++
Sbjct: 988 QGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDKFGNLWL 1047
Query: 1193 --CQKDSAATSDED 1204
C K ++ +DED
Sbjct: 1048 LRCPKKTSEEADED 1061
>gi|317143715|ref|XP_001819645.2| pre-mRNA-splicing factor rse1 [Aspergillus oryzae RIB40]
Length = 1209
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 180/437 (41%), Gaps = 51/437 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L ++ E +G T VK K++ + + L L +G ++V S
Sbjct: 306 FLLQTEDGDLFKLNIDMVEDDNGQLTGEVKRLKIKYFDTVPVASSLLILKSGFLYVASEA 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++E+ +L P+ID
Sbjct: 366 GNHHFYQFEKLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSAENLNLVETINSLNPLID 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
V +L + Q+ T SG + R +++G+ + E +LP + +W +
Sbjct: 426 SKVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSELPSVPSAVWTTKLTRADE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++Q+ P I
Sbjct: 486 FDAYIILSFANGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHIM 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ G+ + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V CL + E ++ AVG D + R+LSL S++ + P
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTAAPSAL 656
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
I+ S + YL + L G LD +G L+D + LG++P L
Sbjct: 657 NIMSMSDSSSGGTA-LYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVK 715
Query: 461 STTNVFACSDRPTVIYS 477
T V A S RP + YS
Sbjct: 716 GQTAVLALSSRPWLGYS 732
>gi|408400551|gb|EKJ79630.1| hypothetical protein FPSE_00190 [Fusarium pseudograminearum CS3096]
Length = 1212
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 123/529 (23%), Positives = 214/529 (40%), Gaps = 64/529 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L ++ E +G T VK KV+ + + L L +G ++V ++
Sbjct: 309 FLLQTDDGDLFKLSIDMIEDEEGNPTGEVKRLKVKYFDTVPVASSLCILKSGFLYVATQF 368
Query: 140 GDSQLVKLNRSPDEN---------------GTY------------VSVMESFTNLAPIID 172
G+ + + D++ +Y ++++ES + P++D
Sbjct: 369 GNYSFYQFEKLGDDDEELEFYSDDFPADPKASYEPVYFHPRPTENLALVESIPAMNPLLD 428
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
V +L + Q+ T G S R++++G+ + E +LPGI +W L + +
Sbjct: 429 CKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIVASELPGIPSAVWTLKLNRSEQ 488
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D +VLSF T VL++ G VEE GF + T + ++QV P I
Sbjct: 489 YDAYIVLSFTNGTLVLSI-GETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHPKG---IR 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
V+ W P +SI + N +QV A +G VY+ ++ GS + + +
Sbjct: 545 HIRNGNVNEWAAPQHRSIVAATANAHQVAVALSSGEIVYFEMDADGSLAEYDEKKEMFGT 604
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + + ++ AVG D + R+LSL +LE + L P
Sbjct: 605 VTCLSLGDVPEGRL-----RSSFLAVGC-DDCTVRILSLDPESTLENKSVQALTAA--PT 656
Query: 406 SILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
S+ + E YL + L G LD +G LTD ++ LG + L
Sbjct: 657 SLAIIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKEVRLFQVTV 716
Query: 460 LSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTF 517
T V S RP + Y+ V + +N + + ++E + + +
Sbjct: 717 QGKTCVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRI 776
Query: 518 GTIDEIQKLHI-RTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGST 565
ID + + I +++PL P+++ F I EAD +T
Sbjct: 777 FNIDRLGETLIQKSIPLTYTPKKLVKHPDQPLFYTI-------EADNNT 818
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 1016 EILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDD 1071
++L L E A+S F +D ++ V+GT VV+P +G + I+ + +
Sbjct: 870 QVLQTIDLENNEAAVSAAIVSFSSQDNESFLVIGTGKDMVVNPRSF--SEGYLHIYRFLE 927
Query: 1072 G--KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALF 1129
G +L+ I + +++ ++ F G++L ++ +++R+++ + LR + +
Sbjct: 928 GGRELEFIHKTKVEEPPLALLAFQGRVLVAVGTSLRIYDLGMRQMLRKSQAEVATQQIVS 987
Query: 1130 LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYN 1189
L +G I+VGD+ + +T + YK D W T ++D E G + N
Sbjct: 988 LNTQGSRIIVGDVQQGVTYVVYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDKFGN 1047
Query: 1190 LFI--CQKDSAATSDEDRTHLQEV-------GTVHLV 1217
+FI C + ++ +DE+++ L + GT H V
Sbjct: 1048 MFIVRCPEKASEEADEEQSGLHLINARDYLHGTPHRV 1084
>gi|342885857|gb|EGU85809.1| hypothetical protein FOXB_03657 [Fusarium oxysporum Fo5176]
Length = 1189
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 127/549 (23%), Positives = 221/549 (40%), Gaps = 72/549 (13%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF L ++ E +G T VK K++ +
Sbjct: 297 MHKLKG--SAGAFF------FLLQTDDGDLFKLSIDMIEDEEGNPTGEVKRLKIKYFDTV 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN---------------GTY------- 157
+ L L +G ++V S+ G+ + + D++ +Y
Sbjct: 349 PVASSLCILKSGFLYVASQFGNYSFYQFEKLGDDDEELEFYSDDFPADPRASYEPVYFHP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
++++ES + P++D V +L + Q+ T G S R++++G+ + E
Sbjct: 409 RPTENLALVESIPAMNPLLDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPGI +W L + + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGIPSAVWTLKLNRSEQYDAYIVLSFTNGTLVLSI-GETVEEVSDSGFLTSVPTLAA 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I V+ W P +SI + N +QV A +G VY+
Sbjct: 528 QLLGDDGLIQVHPKG---IRHVRNGHVNEWAAPQHRSIVAATANAHQVAVALSSGEIVYF 584
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V CL + + ++ AVG D + R+LSL
Sbjct: 585 EMDADGSLAEYDEKKEMFGTVTCLSLGDVPEGRL-----RSSFLAVGC-DDCTVRILSLD 638
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRL 439
+LE + L P S+ + + YL + L G LD +G L
Sbjct: 639 PESTLENKSVQALTAA--PTSLAIIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGEL 696
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCS 497
TD ++ LG + L T V S RP + Y+ V + +N + +
Sbjct: 697 TDTRQKFLGPKEVRLFQVTVQGKTCVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWN 756
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHI-RTVPLGEAPRRIAYQESSQTFGVITTRI 556
++E + + + ID + I +++PL P+++ F I
Sbjct: 757 FSSEQCEEGIVGIQGQSLRIFNIDRLGDTLIQKSIPLTYTPKKLVKHPDQPLFYTI---- 812
Query: 557 DIQEADGST 565
EAD +T
Sbjct: 813 ---EADNNT 818
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1033 ISSKFGEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSM 1089
I S +D ++ V+GT VV+P +G + I+ + DG G ++
Sbjct: 888 IVSFSSQDNESFLVVGTGKDMVVNPRSY--SEGYLHIYRFQDG-----------GENLTL 934
Query: 1090 CEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLL 1149
F G++ ++ + +R+++ + LR + + L +G I+VGD+ + +T +
Sbjct: 935 LAFQGRVAVAVGTQLRIYDLGMRQMLRKSQAEVAAQQIVSLNTQGSRIIVGDVQQGVTYV 994
Query: 1150 QYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAATSDEDRTH 1207
YK D W T ++D E G + N+FI C + ++ +DE++T
Sbjct: 995 VYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPEKASEEADEEQTG 1054
Query: 1208 LQ 1209
L
Sbjct: 1055 LH 1056
>gi|261196131|ref|XP_002624469.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis SLH14081]
gi|239587602|gb|EEQ70245.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis SLH14081]
gi|239614558|gb|EEQ91545.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis ER-3]
gi|327356791|gb|EGE85648.1| pre-mRNA-splicing factor rse1 [Ajellomyces dermatitidis ATCC 18188]
Length = 1209
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 181/443 (40%), Gaps = 49/443 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + ++ E +G T V+ K++ + I L L +G +FV S
Sbjct: 306 FLLQTEDGDLFKVTIDMVEDDNGQITGEVRRLKLKYFDTVPIASSLCILKSGFLFVASET 365
Query: 140 GDS---QLVKLNRSPDE----NGTY--------------------VSVMESFTNLAPIID 172
G+ Q KL DE + +Y V+++ES +L P++D
Sbjct: 366 GNHHFYQFEKLGDDDDEIEFTSDSYSADPSEPLAPAYFRPRPYENVNLVESINSLNPLMD 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
V +L Q+ T G S R +++G+ + E +LP + +W +
Sbjct: 426 CKVANLTDDDAPQIYTICGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTREDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIILSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E A++ AVG D + R+LSL +LE + L
Sbjct: 603 VTCLSLG-----EVPKGRARSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656
Query: 406 SILM----TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ T YL + L G LD +G L+D + LG +P L
Sbjct: 657 SIMAMSDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKE 716
Query: 462 TTNVFACSDRPTVIYSSNHKLVF 484
+ A S RP + YS F
Sbjct: 717 QKAILALSSRPWLGYSDLQTKAF 739
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 10/200 (5%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N+ ++ +L E A+S+ + F +D T+ V+GT VV+P + G I ++
Sbjct: 864 NSQSVISQIELEENEAAVSVAAVTFSSQDDETFLVVGTGKDMVVNPRSS--SAGFIYVYR 921
Query: 1069 Y-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNII 1126
+ ++GK L+ I + +++ ++ F G+LLA I + VR+++ + LR + +
Sbjct: 922 FQEEGKELEFIHKTKVEQPPMALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASVVPHL 981
Query: 1127 ALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAEN 1186
+ L+ +G I+V D+ S+T + YK E D W T ++D E G +
Sbjct: 982 VVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDK 1041
Query: 1187 SYNLFI--CQKDSAATSDED 1204
NL++ C + ++ +DED
Sbjct: 1042 FGNLWLLRCPEKASEEADED 1061
>gi|46125735|ref|XP_387421.1| hypothetical protein FG07245.1 [Gibberella zeae PH-1]
Length = 1208
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 123/529 (23%), Positives = 214/529 (40%), Gaps = 64/529 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L ++ E +G T VK KV+ + + L L +G ++V ++
Sbjct: 309 FLLQTDDGDLFKLSIDMIEDEEGNPTGEVKRLKVKYFDTVPVASSLCILKSGFLYVATQF 368
Query: 140 GDSQLVKLNRSPDEN---------------GTY------------VSVMESFTNLAPIID 172
G+ + + D++ +Y ++++ES + P++D
Sbjct: 369 GNYSFYQFEKLGDDDEELEFYSDDFPADPKASYEPVYFHPRPTENLALVESIPAMNPLLD 428
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
V +L + Q+ T G S R++++G+ + E +LPGI +W L + +
Sbjct: 429 CKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIVASELPGIPSAVWTLKLNRSEQ 488
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D +VLSF T VL++ G VEE GF + T + ++QV P I
Sbjct: 489 YDAYIVLSFTNGTLVLSI-GETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHPKG---IR 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
V+ W P +SI + N +QV A +G VY+ ++ GS + + +
Sbjct: 545 HIRNGNVNEWAAPQHRSIVAATANAHQVAVALSSGEIVYFEMDADGSLAEYDEKKEMFGT 604
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + + ++ AVG D + R+LSL +LE + L P
Sbjct: 605 VTCLSLGDVPEGRL-----RSSFLAVGC-DDCTVRILSLDPESTLENKSVQALTAA--PT 656
Query: 406 SILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
S+ + E YL + L G LD +G LTD ++ LG + L
Sbjct: 657 SLAIIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKEVRLFQVTV 716
Query: 460 LSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTF 517
T V S RP + Y+ V + +N + + ++E + + +
Sbjct: 717 QGKTCVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRI 776
Query: 518 GTIDEIQKLHI-RTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGST 565
ID + + I +++PL P+++ F I EAD +T
Sbjct: 777 FNIDRLGETLIQKSIPLTYTPKKLVKHPDQPLFYTI-------EADNNT 818
Score = 60.1 bits (144), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 1016 EILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDD 1071
++L L E A+S F +D ++ V+GT VV+P +G + I+ + +
Sbjct: 870 QVLQTIDLENNEAAVSAAIVPFSSQDNESFLVIGTGKDMVVNPRSF--SEGYLHIYRFLE 927
Query: 1072 G--KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALF 1129
G +L+ I + +++ ++ F G++L ++ +++R+++ + LR + +
Sbjct: 928 GGRELEFIHKTKVEEPPLALLAFQGRVLVAVGTSLRIYDLGMRQMLRKSQAEVATQQIVS 987
Query: 1130 LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYN 1189
L +G I+VGD+ + +T + YK D W T ++D E G + N
Sbjct: 988 LNTQGSRIIVGDVQQGVTYVVYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDKFGN 1047
Query: 1190 LFI--CQKDSAATSDEDRTHLQEV-------GTVHLV 1217
+FI C + ++ +DE+++ L + GT H V
Sbjct: 1048 MFIVRCPEKASEEADEEQSGLHLINARDYLHGTPHRV 1084
>gi|384253371|gb|EIE26846.1| hypothetical protein COCSUDRAFT_52476 [Coccomyxa subellipsoidea
C-169]
Length = 1205
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 199/476 (41%), Gaps = 60/476 (12%)
Query: 120 SIPECLT--YLDNGVVFVGSRLGDSQLVK-LNRSPDENGTYVS----------------- 159
+IP C++ L G +F S G+ L + L+ D++ S
Sbjct: 328 TIPPCISICVLKTGFLFAASEFGNHALYQFLSIGDDDDAVEASSAELTETQEGFQPVFFD 387
Query: 160 --------VMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHA 211
+++ +L+PI+D V +L ++ QL G +LR++R G+ E A
Sbjct: 388 PRPLRNLRLVDEVESLSPIMDFKVANLLKEEIPQLYAMCGRGARSTLRVLRPGLAATEIA 447
Query: 212 CIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFY 270
LPG +W L D +++SF T VL++ G V E GF T
Sbjct: 448 VSPLPGNPTAVWTLKRSVNDPFDAYIIVSFTNATLVLSI-GETVVEVNDSGFLGTVPTLR 506
Query: 271 CGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYY 329
+ ++LQV PS L + RV+ W P ++I + N+ QV+ A +G ++ Y
Sbjct: 507 TQLLTDDSMLQVHPSG--LRHIRADRRVNEWRAPGRRTIVKAATNEQQVVIALSGGELIY 564
Query: 330 LEVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP 388
E+ + ++ ++ + + +V CLDI+P+ +++ AV + D S R+LSL
Sbjct: 565 FELSPTGQLMEVEKKEMAGDVVCLDIAPVPEGRQ-----RSRFLAVASY-DSSVRILSLD 618
Query: 389 SLEEVCKEPLGGEII---PRSILM--------------TCFEGHCYLLVALGDGSMFYFS 431
E L +++ P S+L G +L + L +G +
Sbjct: 619 P--EDMMSALAVQMVSAVPESLLFIDSPAADIAGKGEDASGAGGLFLNIGLLNGVLLRTE 676
Query: 432 LDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQ 491
+D +G+L+D + LGT+P L ++ A S RP + YS + + ++
Sbjct: 677 VDKVTGQLSDTRTRFLGTRPPKLFAVSVRGKRSMLALSSRPWLGYSDMGRYTLAPLSYEA 736
Query: 492 VNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESS 546
+++ ++ P+ + S T++ + + + + L PR+ S
Sbjct: 737 LDYASGFASDQCPEGFCAVSKSMLRILTLERLGEAFNQQVTRLRYTPRKFVVHPES 792
Score = 76.6 bits (187), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 11/218 (5%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK---QGRII 1065
++D + + +L E A+SL +F P VL V P+ +G I
Sbjct: 856 VLDPTSLQTSSVLELDGNEAAVSLCLLRFSNWPEEGMVLAVGTVQGLAFYPRTADEGYIR 915
Query: 1066 IFHYDDG--KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSH-- 1121
++ + D +L+ I + G ++ F G+LLA + T+R++E +K LR +C H
Sbjct: 916 LYRFRDSGRQLELIHKTPTGGIPGALAAFKGRLLAGVGPTLRIYEAGKKKLLR-KCEHRK 974
Query: 1122 FNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF 1181
IA L GD I VGDL S+ +YK E + E + D P +T+ LD +
Sbjct: 975 LPTHIAT-LATSGDRIFVGDLQESMHYFRYKANENALYEYADDIAPRHLTAALPLDYDTV 1033
Query: 1182 LGAENSYNLFICQ--KDSAATSDEDRTHLQEVGTVHLV 1217
GA+ N+F+ + +D + +ED T + G L+
Sbjct: 1034 AGADKFCNIFVTRLPRDVSTQVEEDPTGGKFAGAAGLL 1071
>gi|425768510|gb|EKV07031.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum PHI26]
gi|425775700|gb|EKV13954.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum Pd1]
Length = 1209
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 135/558 (24%), Positives = 219/558 (39%), Gaps = 58/558 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L LE E G T VK ++ I + L L +G ++ S
Sbjct: 306 FLLQTEDGDLFKLNLEMVEDKQGQPTGEVKRLTIKYFDTIPVSTNLLILKSGFLYAASES 365
Query: 140 GDS---QLVKLNRSPDE------------------------NGTYVSVMESFTNLAPIID 172
G+ Q KL PDE V++MES +L+P+ID
Sbjct: 366 GNHNFYQFEKLGDDPDELFFSSDSFSADHSVPSAPVFFHPRGAENVNLMESMNSLSPLID 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+++L Q+ T G S R +++G+ + E DL + +W +
Sbjct: 426 SKILNLSEDDAPQIYTICGSGARSSFRTLKHGLEVSEIVESDLQQVPSAVWTTKLTRADE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FHTYIILSFANGTLVLSI-GEIVEEVSDTGFLSSAPTLAVQQLGEDSLVQVHPRGIRHIL 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ G+ + R +
Sbjct: 545 ADQ--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V L + E ++ AVG D + R+LSL S++ + P
Sbjct: 603 VTSLSMG-----EVPEGRMRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656
Query: 401 EIIPRSILMTCFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
+I+ ++ + G YL + L G LD +G L+D + +G +P L
Sbjct: 657 QIM--AMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFIGAKPVKLSQVSV 714
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTF 517
T V A S RP + YS F L V N +E + + +
Sbjct: 715 KGQTAVLALSTRPWLGYSDIQTKSFMLTPLDYVGLEWGWNFSSEQCVEGMIGIQGRSLRI 774
Query: 518 GTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQ 576
T++++ ++ ++PL PRR F VI + D +T R +QAQ
Sbjct: 775 FTVEKLDNNMLQESIPLSYTPRRFVKHPDQHLFYVIES--DNNVLSPATRQRLIDDSQAQ 832
Query: 577 NTTSSTISSLSYIKPGST 594
N + + + P +T
Sbjct: 833 NGEVADLPPADFGYPRAT 850
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 14/235 (5%)
Query: 995 PADFNMEVEVHN----LLIIDQ-NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLG 1048
PADF + + I+D T ++ L E A+SL + F +D T+ V+G
Sbjct: 841 PADFGYPRATGHWASCVQIVDPITTKSVISTLDLEDNEAAVSLAAVSFSSQDDETFLVVG 900
Query: 1049 TA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVR 1105
TA V P + I F D +L+ I + ++ ++ F G+LLA I +R
Sbjct: 901 TAKDMTVSPPSSSCGFIHIYRFQEDGRELEFIHKTQVDEPPLALLGFQGRLLAGIGPVLR 960
Query: 1106 LFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDY 1165
+++ ++ LR + + L+ +G I+V D+ S+T + YK + + D
Sbjct: 961 VYDLGMKQLLRKCQAPVVPKTIVGLQTQGSRIIVSDIRESVTYVVYKYQDNVLIPFADDS 1020
Query: 1166 NPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAATSDEDRT--HL-QEVGTVH 1215
W +S ++D E G + NL++ C + +DED + HL E G +H
Sbjct: 1021 IARWTSSTTMVDYETTAGGDKFGNLWLVRCPSKISEQADEDGSGAHLIHEKGYLH 1075
>gi|238487250|ref|XP_002374863.1| nuclear mRNA splicing factor, putative [Aspergillus flavus
NRRL3357]
gi|220699742|gb|EED56081.1| nuclear mRNA splicing factor, putative [Aspergillus flavus
NRRL3357]
Length = 1210
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 179/437 (40%), Gaps = 51/437 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L ++ E +G T VK K++ + + L L +G ++V S
Sbjct: 306 FLLQTEDGDLFKLNIDMVEDDNGQLTGEVKRLKIKYFDTVPVASSLLILKSGFLYVASEA 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++E+ +L P+ID
Sbjct: 366 GNHHFYQFEKLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSAENLNLVETINSLNPLID 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
V +L + Q+ T SG + R +++G+ + E +LP + +W +
Sbjct: 426 SKVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSELPSVPSAVWTTKLTRADE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++Q+ P I
Sbjct: 486 FDAYIILSFANGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHIM 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ G+ + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V CL + E ++ AVG D + R+LSL S++ + P
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTAAPSAL 656
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
I+ + YL + L G LD +G L+D + LG++P L
Sbjct: 657 NIM-SMSDSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVK 715
Query: 461 STTNVFACSDRPTVIYS 477
T V A S RP + YS
Sbjct: 716 GQTAVLALSSRPWLGYS 732
>gi|326497839|dbj|BAJ94782.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1227
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 117/516 (22%), Positives = 222/516 (43%), Gaps = 64/516 (12%)
Query: 91 LFMLLLEKEE----KMDGTF---SVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQ 143
LF LL+ E K+D +V E +++ I + + L +G +F S G+
Sbjct: 305 LFFFLLQTEYGDIFKVDLDHHGDTVSELRIKYFDTIPVASAICVLRSGFLFAASEFGNHA 364
Query: 144 LVK---LNRSPDENGTYVSVMES----------------------FTNLAPIIDMVVVDL 178
L + + R D + ++ME+ +L PI+DM + +L
Sbjct: 365 LYQFRDIGRDVDVESSSATLMETEEGFQPVFFQPRALKNLVRIDEIESLMPIMDMRIANL 424
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK-GIWALSIGSPKNLDNTLV 237
+ Q+ T G +LRI+R G+ I E A LP +W + D +V
Sbjct: 425 FDEETPQVYTACGRGSRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKNINDMFDAYIV 484
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SF T VL++ G +EE F + + +++QV P+ I + R
Sbjct: 485 VSFANVTLVLSI-GETIEEVSDSHFLDTTHSLAVSLLGEDSLMQVHPNGIRHIRED--GR 541
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDIS 355
V+ W P K+I+ V N+ QV+ A +G ++ Y E+ + ++ ++ + + +VACL I+
Sbjct: 542 VNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAIA 601
Query: 356 PLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILM--- 409
P+ +++ AVG + D + R+LS + C +PL + + P S+L
Sbjct: 602 PVPEGRQ-----RSRFLAVGSY-DNTIRILSFDP--DDCLQPLSVQSVSSAPESLLFLEV 653
Query: 410 ---------TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
+ + +L L +G +F ++D +G+L+D + LG +P L
Sbjct: 654 QASVGGEDGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVS 713
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTFGT 519
+ S RP + Y + + ++ + S +++ + +A+A D+ F T
Sbjct: 714 HRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIF-T 772
Query: 520 IDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
I+ + + + ++PL PR+ + VI +
Sbjct: 773 IERLGETFNETSIPLRYTPRKFVILPKKKYLAVIES 808
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ-- 1061
V + I+D + + +L E A+S+ + F D +L + PK+
Sbjct: 873 VSCIRILDPRSRDTTCLLELQDNEAAVSICTVNF-HDKEHGTLLAVGTTKGLQFWPKRSL 931
Query: 1062 --GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR- 1116
G I I+ + ++GK L+ + + +++ S+C+F G+LLA + S +RL++ K LR
Sbjct: 932 ASGFIHIYKFVNEGKSLELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLYDLGKRKLLRK 991
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
E F I + + D I VGD+ S +Y+ E + D P W+T+ +
Sbjct: 992 CENKLFPRTI-VSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHI 1050
Query: 1177 DDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
D + GA+ N++ + +D + +ED T
Sbjct: 1051 DFDTMAGADKFGNIYFARLPQDLSDEIEEDPT 1082
>gi|391867503|gb|EIT76749.1| splicing factor 3b, subunit 3 [Aspergillus oryzae 3.042]
Length = 1034
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 179/437 (40%), Gaps = 51/437 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L ++ E +G T VK K++ + + L L +G ++V S
Sbjct: 131 FLLQTEDGDLFKLNIDMVEDDNGQLTGEVKRLKIKYFDTVPVASSLLILKSGFLYVASEA 190
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++E+ +L P+ID
Sbjct: 191 GNHHFYQFEKLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSAENLNLVETINSLNPLID 250
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
V +L + Q+ T SG + R +++G+ + E +LP + +W +
Sbjct: 251 SKVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSELPSVPSAVWTTKLTRADE 310
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++Q+ P I
Sbjct: 311 FDAYIILSFANGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHIM 369
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ G+ + R +
Sbjct: 370 ADR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGT 427
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V CL + E ++ AVG D + R+LSL S++ + P
Sbjct: 428 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTAAPSAL 481
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
I+ + YL + L G LD +G L+D + LG++P L
Sbjct: 482 NIM-SMSDSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVK 540
Query: 461 STTNVFACSDRPTVIYS 477
T V A S RP + YS
Sbjct: 541 GQTAVLALSSRPWLGYS 557
>gi|342320507|gb|EGU12447.1| Pre-mRNA-splicing factor RSE1 [Rhodotorula glutinis ATCC 204091]
Length = 1212
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 119/506 (23%), Positives = 210/506 (41%), Gaps = 63/506 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G LF + +E EE+ V K++ + L L +G +FV + G+
Sbjct: 309 FLLQSEEGDLFKVTIEHEEE-----EVTALKIKYFDTVPSASSLCILKSGFLFVATEFGN 363
Query: 142 SQLVKLNRSPDEN---------------GT--------------YVSVMESFTNLAPIID 172
+L + + D++ GT +++ + +LAPI+D
Sbjct: 364 PRLYQFEKLGDDDDETEFSSTDYDNLGAGTDPLPPALFRPRELQNLAIADEVESLAPILD 423
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK-GIWA--LSIGSP 229
V + + Q+ G SLRI+R G+ + E +LPG +W L
Sbjct: 424 AKVANYLGEDTPQIYAACGRGARSSLRILRQGLEVMEAVSSELPGAPIAVWTTKLRAEGA 483
Query: 230 KNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAIL 289
+ D ++LSFV T VL + G +EE GF S T + +LQ+ P
Sbjct: 484 SSYDAYIILSFVNGTLVLAI-GDTIEEVSDTGFISSAPTLGVQQLGDDALLQIYPRGIRH 542
Query: 290 ISTESKARVSSWEPPNGKSISVVSCNKNQVLC--ATGCDVYY-LEVHGSEIKQLAHRALE 346
I + RV+ W+ ++I + N QV+ +TG VY+ L++ G + + +
Sbjct: 543 ILADK--RVNEWKVGARETIVCATTNSRQVVIGLSTGELVYFELDMDGQLNEFQERKPMG 600
Query: 347 YEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP---SLEEVCKEPLGGEII 403
E+ L I+ E + AVG D + R++SL +L+ + + L
Sbjct: 601 AEILALSIA-----EVPEGRQRTPYLAVGC-ADSTVRIISLDPENTLDSLSLQALTAP-- 652
Query: 404 PRSILMT--------CFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLK 455
P SI+M + ++ + L +G + LDP +G L D + LG++P L
Sbjct: 653 PSSIVMAEITDASIDKYHATMFVNIGLNNGVLLRTVLDPLTGSLGDTRTRFLGSRPVKLA 712
Query: 456 TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTF 515
+ + A S RP + Y+ L F+ + +++ S +AE P+ L ++
Sbjct: 713 RVPVQGSPAILALSSRPWLNYAYRGILQFTPLIFDALDYAWSFSAELCPEGLIGIVGNSL 772
Query: 516 TFGTIDEI-QKLHIRTVPLGEAPRRI 540
T + QK+ + L PR++
Sbjct: 773 RIFTFPRLGQKVQQTVIDLSYTPRQL 798
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 10/203 (4%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYF-VLGTAVVHPEENEPKQGRIIIF 1067
+ID T E + L E A S F PN F V+GT P+ +
Sbjct: 864 VIDPVTAETVFKVDLEQNEAAFSAAIVTFHSHPNEVFLVVGTG--QDTSLAPRACKQAYL 921
Query: 1068 H----YDDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSH 1121
H ++G+ L+ + + E+ ++ F G+L+A + +RL++ +K LR E
Sbjct: 922 HTYKLLEEGRQLELLHKTEVDDIPKALIAFQGRLVAGVGKALRLYDLGKKKLLRKAENKG 981
Query: 1122 FNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF 1181
F +I + L +G I+VGD S+ YK E + D +P W T+ ++D E
Sbjct: 982 FATMI-MTLNTQGTRIIVGDAQESVYYALYKAPENRLLIFADDISPRWTTASIMVDYETV 1040
Query: 1182 LGAENSYNLFICQKDSAATSDED 1204
+ N F+ + +SD D
Sbjct: 1041 AAGDKFGNFFVNRLPKGVSSDVD 1063
>gi|145549784|ref|XP_001460571.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428401|emb|CAK93174.1| unnamed protein product [Paramecium tetraurelia]
Length = 1178
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 181/427 (42%), Gaps = 52/427 (12%)
Query: 157 YVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP 216
++S+++ N + I D+ V DL ++G Q+ C +LR++R+G+ I + A +L
Sbjct: 388 HLSLLQELNNFSCISDLKVADLAKEGNPQIYICCAAGNRSTLRVLRHGLEITQLANTNLQ 447
Query: 217 GIK-GIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVD 275
GIW L + +V+S++ T VL + G +VE+ G +QT + G
Sbjct: 448 AKPLGIWTLKERYEDPVHKYIVISYINKTLVLKI-GEKVEQVHDTGLEGTKQTIHVGT-- 504
Query: 276 PRTVLQVTPSAAILISTESKARVSSWEPP-----NGKSISVVSCNKNQVLCATGCDVYYL 330
+ + I I T + +PP +GK I VS K G DVYY
Sbjct: 505 ------LIDDSQIQILTNGYRHIRKNKPPTDYIIDGKVIKGVSNEKQVAFALAGGDVYYF 558
Query: 331 EVHGSEIK----QLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLS 386
E+ + + ++ ++ E+ L++ P+ EE + + V L +D + RLLS
Sbjct: 559 ELDTTSVSGNLIEITKDQMDNEIKALELGPI--EEGRQ---RCKFLCVAL-SDQTIRLLS 612
Query: 387 LPSLEEVCKEPLGGEIIPRSILMTC-------------FEGHCYLLVALGDGSMFYFSLD 433
L E C E + +P C F +L + L +G + S+D
Sbjct: 613 LEP--ESCFERGAMQALPSEAESLCMMEMASEQEGQQSFTKQLFLFIGLNNGLLMRTSVD 670
Query: 434 PASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVN 493
SG L+D + LGT+P + + A S R + Y+++ ++ ++ ++
Sbjct: 671 QLSGGLSDTRTRYLGTKPVKCLRITANQQQAMLALSSRSWLCYNNSGRIFMQPLSYDYLD 730
Query: 494 HMCSLNAESYPDSLALATDSTF------TFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQ 547
+ + A+ + + ST FG I Q L L +PR++ + E S+
Sbjct: 731 YASAFLAKEF-QGIVGTNQSTLRIIMPERFGEIFNQQSLD-----LTYSPRKMIFHEPSK 784
Query: 548 TFGVITT 554
+I +
Sbjct: 785 AIFIIES 791
Score = 79.7 bits (195), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 8/189 (4%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK----QGRI 1064
I+D E ++ HQ + ++A S+ +F P Y +GT V NEP QG I
Sbjct: 832 IVDATKLETVNVHQFYENQHACSICYIQFAGYPEQYICVGT--VKDLVNEPSRKFSQGFI 889
Query: 1065 IIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
F YD+ L+ I Y++ + G+LL +R++E N++ L+ E + N
Sbjct: 890 HTFVYDNKTLKLKHSTPIDEIPYALAAWRGRLLVGAGCNLRVYEMGNQRILKKAEIKNLN 949
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
+ I + VK D I V ++ S+ LL+Y + +F E++ D P ++T+ +LD +
Sbjct: 950 SFITSIM-VKEDRIYVAEVADSIHLLRYNIRDQTFMELADDILPRYVTASTVLDYHTVIA 1008
Query: 1184 AENSYNLFI 1192
+ N+F+
Sbjct: 1009 GDKFENIFV 1017
>gi|145510432|ref|XP_001441149.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408388|emb|CAK73752.1| unnamed protein product [Paramecium tetraurelia]
Length = 1174
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 181/427 (42%), Gaps = 52/427 (12%)
Query: 157 YVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP 216
++S+++ N + I D+ V DL ++G Q+ C +LR++R+G+ I + A +L
Sbjct: 384 HLSLLQELNNFSCISDLKVADLAKEGNPQIYICCAAGNRSTLRVLRHGLEITQLANTNLQ 443
Query: 217 GIK-GIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVD 275
GIW L + +V+S++ T VL + G +VE+ G +QT + G
Sbjct: 444 AKPLGIWTLKERYEDPVHKYIVISYINKTLVLKI-GEKVEQVHDTGLEGTKQTIHVGT-- 500
Query: 276 PRTVLQVTPSAAILISTESKARVSSWEPP-----NGKSISVVSCNKNQVLCATGCDVYYL 330
+ + I I T + +PP +GK I VS K G DVYY
Sbjct: 501 ------LIDDSQIQILTNGYRHIRKNKPPTDYIIDGKVIKGVSNEKQVAFALAGGDVYYF 554
Query: 331 EVHGSEIK----QLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLS 386
E+ + + ++ ++ E+ L++ P+ EE + + V L +D + RLLS
Sbjct: 555 ELDTTSFQGNLIEITKDQMDNEIKALELGPI--EEGRQ---RCKFLCVAL-SDQTIRLLS 608
Query: 387 LPSLEEVCKEPLGGEIIPRSILMTC-------------FEGHCYLLVALGDGSMFYFSLD 433
L E C E + +P C F +L + L +G + S+D
Sbjct: 609 LEP--ESCFERGAMQALPSEAESLCMMEMASEQEGQQSFTKQLFLFIGLNNGLLMRTSVD 666
Query: 434 PASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVN 493
SG L+D + LGT+P + + A S R + Y+++ ++ ++ ++
Sbjct: 667 QLSGGLSDTRTRYLGTKPVKCLRINANQQQAMLALSSRSWLCYNNSGRIFMQPLSYDYLD 726
Query: 494 HMCSLNAESYPDSLALATDSTF------TFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQ 547
+ + A+ + + ST FG I Q L L +PR++ + E S+
Sbjct: 727 YASAFLAKEF-QGIVGTNQSTLRIIMPERFGEIFNQQSL-----DLTYSPRKMIFHEPSK 780
Query: 548 TFGVITT 554
+I +
Sbjct: 781 AIFIIES 787
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 8/189 (4%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEP----KQGRI 1064
I+D E ++ HQ + ++A S+ +F P Y +GT V NEP QG I
Sbjct: 828 IVDATKLETINVHQFYENQHACSICYIQFAGYPEQYVCVGT--VKDLVNEPTRKFSQGFI 885
Query: 1065 IIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
F YD+ L+ +I Y++ + G+LL +R++E N++ L+ E + N
Sbjct: 886 HTFIYDNKTLKLKHSTQIDEIPYALAAWRGRLLVGAGCNLRVYEMGNQRILKKAEIKNLN 945
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
+ I + VK D I V ++ S+ LL+Y + +F E++ D P ++T+ +LD +
Sbjct: 946 SFITSIM-VKEDRIYVAEVSDSIHLLRYNIRDQTFMELADDILPRYVTASTVLDYHTVIA 1004
Query: 1184 AENSYNLFI 1192
+ N+F+
Sbjct: 1005 GDKFENIFV 1013
>gi|357478323|ref|XP_003609447.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355510502|gb|AES91644.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 1225
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 117/526 (22%), Positives = 213/526 (40%), Gaps = 56/526 (10%)
Query: 104 GTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYV----S 159
G V E ++ I++ + L +G +F S G+ L + D++ V S
Sbjct: 324 GGDRVSELNIKYFDTIAVAVSICVLKSGFLFAASEFGNHALYQFKGIGDDDNDVVASSAS 383
Query: 160 VMESFTNLAP----------------------IIDMVVVDLERQGQGQLVTCSGGFKEGS 197
+ME+ P I+DM V +L + Q+ T G S
Sbjct: 384 LMETEEGFQPVFFLPRRLKNLVRIDPVESLMSIMDMKVSNLFEEETPQIFTLCGRGPRSS 443
Query: 198 LRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEE 256
LRI+R G+ + E A LPGI +W + D+ +V+SF T VL++ G VEE
Sbjct: 444 LRIMRTGLAVSEMAVSKLPGIPSAVWTVKKNVMDEFDSYIVVSFTNATLVLSI-GETVEE 502
Query: 257 TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNK 316
GF + + +++QV P+ I + R + W+ ++I+ V N+
Sbjct: 503 VSNSGFLDTAPSLAVSLIGDDSIMQVHPNGIRHIRED--GRTNEWQTSGKRTIAKVGSNR 560
Query: 317 NQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAV 374
QV+ A G ++ Y EV + ++ ++ + +VACLDI+P+ +++ AV
Sbjct: 561 LQVVIALNGGELVYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPKGRL-----RSRFLAV 615
Query: 375 GLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMTCFEGHC------------YLL 419
G + D + R+LSL + C + L + + P S+L + +L
Sbjct: 616 GSY-DNTIRILSLDP--DDCMQTLSIQSLSSAPESLLFLEVQASVGGEDGADHPASLFLS 672
Query: 420 VALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
L G + +D +G L+D + LG + L + S RP + Y
Sbjct: 673 AGLQSGVLSRTVVDTVTGLLSDARSRFLGLKAPKLFPIILGRKCAMLCLSSRPWLGYIHQ 732
Query: 480 HKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ + ++ + + S +++ + + + T++ + + +TV PL PR
Sbjct: 733 GHFLLTPLSYETLEYAASFSSDQCLEGVVSVSGEALRIFTVERLGETFNQTVIPLRYTPR 792
Query: 539 RIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQNTTSSTIS 584
++ Q + VI + A R AQ ++T S
Sbjct: 793 KLVLQPKRKLLVVIESDQGALTAKEREAARKECFEAAQTGENATGS 838
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 13/213 (6%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLGTAVVHPEENEPKQ- 1061
V + ++D T +L E A S+ + F + + T +GTA + PK+
Sbjct: 871 VSCIRVLDPRTGNTTCLLELQENEAAFSICTVNFHDKEYGTLLAVGTA--KGLQFTPKRS 928
Query: 1062 ---GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR 1116
G I I+ + DDG+ L+ + + +++G ++C+F G+LLA I +RL++ + LR
Sbjct: 929 LTVGFIHIYRFLDDGRSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKRRLLR 988
Query: 1117 LECSHFNNIIALF-LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
+C + + I++ + D I VGD+ S +Y+ E + D P W+T+
Sbjct: 989 -KCENKSFPISIVSIHAYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYH 1047
Query: 1176 LDDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
+D + GA+ N+F + +D + +ED T
Sbjct: 1048 IDFDTMAGADKFGNIFFARLPQDVSDEVEEDPT 1080
>gi|392578232|gb|EIW71360.1| hypothetical protein TREMEDRAFT_71141 [Tremella mesenterica DSM
1558]
Length = 1250
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 125/506 (24%), Positives = 217/506 (42%), Gaps = 81/506 (16%)
Query: 83 LLGDLAGRLFMLLLEK-EEKMDGTFS--VKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
LLGD AG L L +E E + S +K K +L G + P LT L + VF+GS
Sbjct: 363 LLGDDAGHLTKLTIESAREDLSSKLSAVMKVLKTDL-GFAAAPSSLTLLGSSHVFMGSAC 421
Query: 140 GDSQLVKLNRSPDENGTYVS------------------------------VMESFTNLAP 169
GD+ +++L + T +S ++E + NLAP
Sbjct: 422 GDALIIRLPSVTSSHSTPLSPALKSKGKARADDSLDGFGVEHYHETATVEMVERWMNLAP 481
Query: 170 IIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGI---WALSI 226
+ D V+ + G LV +G SLR +R+G+ +E +D+ G++GI W + +
Sbjct: 482 VKDFCAVEEDGGGLSHLVVAAGASNTNSLRAVRSGVSLE--TLMDIEGVQGIERMWPIML 539
Query: 227 GSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSA 286
S D + LS + +L L+ EV+ + + T + + V+ +
Sbjct: 540 PS---RDQGIFLSTSTSSMLLGLA-PEVQALALPESVVNHPTIAAASWEEVAVIVTANNV 595
Query: 287 AILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA---TGCDVYYLEVHGSEIKQLAHR 343
+ +V SW +G+S +++ + L A +G ++ L+V + + R
Sbjct: 596 TVWSDLTGSVKVGSWS--HGQSRQILAAQISGGLAAIAISGGELVILQVSAHGVDAILTR 653
Query: 344 ALEYEVACLDI----SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG 399
L E+A + I SP+ T WT+ + L +L+++ +
Sbjct: 654 QLGGEIASVAILDGLSPIVVTST--------------WTN----EIFLFTLDQLRSPDMQ 695
Query: 400 GEIIPR-----SILMTCFEGHCYLLVALGDGSMFYFSLDPASG---RLTDKKKVTLGTQP 451
G I S+ + G LL L DG+M + ++ ++ L+++K V+LGTQP
Sbjct: 696 GSTIRENSFCASLQLCPLSGGARLLAGLSDGTMVTYHIESSANNALELSERKAVSLGTQP 755
Query: 452 TVLK-TFRSLSTTNVFAC--SDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLA 508
L T S + + S+R VI S ++ S+VN ++N S+ LA
Sbjct: 756 LRLSPTSLSCGDDRIISVGLSERMCVISESRERIESSSVNRNDTRAAATINTPSHGSCLA 815
Query: 509 LATDSTFTFGTIDEIQKLHIRTVPLG 534
LAT S + ++K+H+RT+ LG
Sbjct: 816 LATSSGISLVKPTSLKKVHVRTLDLG 841
>gi|164656549|ref|XP_001729402.1| hypothetical protein MGL_3437 [Malassezia globosa CBS 7966]
gi|159103293|gb|EDP42188.1| hypothetical protein MGL_3437 [Malassezia globosa CBS 7966]
Length = 1207
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 129/548 (23%), Positives = 230/548 (41%), Gaps = 68/548 (12%)
Query: 59 EWGFHLLRGFSSLGSLWNGWSERY--LLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELL 116
+ GF RG + S+ + + L+ + G LF + ++ E++ V+ ++
Sbjct: 282 QHGFGQSRGSMIVASVLHKMKTSFFLLVQNEDGDLFKVSVDHEDE-----QVEALRIRYF 336
Query: 117 GEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGT----YVSV------------ 160
+ + L L +G + V S G QL + D++ Y+S
Sbjct: 337 DTVPVAATLCILRSGFLLVASETGAQQLYAFQKLGDDDDERFPEYISTDYGSSDAGPSPL 396
Query: 161 --MESFT-----NLA---------PIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNG 204
+ +F NLA P++D V + Q+ G S + +R+G
Sbjct: 397 PSLPTFCPRPLDNLALAYELDALDPLLDAKVSNPLHSDVPQIYAACGRGARSSFKRLRHG 456
Query: 205 IGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFT 263
+ + E DLPG+ + +W+ + S D +VLSFV T VL++ G +EE E GF
Sbjct: 457 LEVSEVVSSDLPGVPEAVWSTKLRSSDQYDGYIVLSFVNGTLVLSI-GETIEEVEDSGFL 515
Query: 264 SDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP---NGKSISVVSC--NKNQ 318
+ ++T + +LQV P I S +V+ W P +G +V+ N+ Q
Sbjct: 516 TTERTLAVQQLGTDALLQVHPRGIRHIL--SNKQVNEWTTPSCQDGSPTQIVAATTNERQ 573
Query: 319 VLCATGCD--VYY-LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVG 375
V+ A VY+ L++ G + R +E ++ L IS E + P A A
Sbjct: 574 VVLALDSQEIVYFELDMDGQLNEFQERRDIEADIVALSISACP-EGSQRTPYVAIACA-- 630
Query: 376 LWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTC------FEGH---CYLLVALGDGS 426
D + R++SL + L P S + C + H ++ + L +G
Sbjct: 631 ---DQTVRIVSLDPDSTLAPMSLQALTAPPSSISVCEMLDASLDRHHLTMFVCIGLANGV 687
Query: 427 MFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSN 486
LDP++G+LTD + LG +P L + T + A S R + Y+ + L F+
Sbjct: 688 YIRTVLDPSTGQLTDTRTRFLGGRPVRLVRTQVHGDTAMMALSTRSWLAYTLHSHLHFTP 747
Query: 487 VNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIA-YQE 544
+ L + H+ + + E PD L + T+ + +L + ++ L PR++A + +
Sbjct: 748 LMLEALTHVSTFHTELCPDGLLGIEGNALRILTVPRLGSELKMDSLRLTYTPRKLAVHPQ 807
Query: 545 SSQTFGVI 552
+ F VI
Sbjct: 808 QASLFYVI 815
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 1007 LLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYF-VLGTA--VVHPEENEPKQGR 1063
L ++D T + + L E ALS+ F N F V+G+A V H P R
Sbjct: 854 LRVVDGTTMQTCAEYALEKDEAALSMALVPFAACGNELFLVVGSALGVTH----APLTWR 909
Query: 1064 IIIFHY----DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLE 1118
D+G L + + E+ ++ F+G+LLA VR+F+ +K LR
Sbjct: 910 AAFLSTYRLTDNGCGLALVHKTEVDHVPLALRAFHGRLLAGTGPYVRIFDMGTKKLLRKC 969
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTS-IEILD 1177
S + L+V+G ++VGD+ S+ YK + + D P W TS + +LD
Sbjct: 970 QSRPFPSKVVSLQVQGYRVIVGDMQESVHYSVYKPATNTLVAFADDIMPRWTTSALLMLD 1029
Query: 1178 DELFLGAENSYNLFICQKDSAA--TSDEDRTHL 1208
+ + + N+F+ + DS+A ++DED T L
Sbjct: 1030 YDTVMAGDKFGNVFVLRIDSSASLSADEDPTGL 1062
>gi|401407861|ref|XP_003883379.1| putative Splicing factor 3B subunit 3 [Neospora caninum Liverpool]
gi|325117796|emb|CBZ53347.1| putative Splicing factor 3B subunit 3 [Neospora caninum Liverpool]
Length = 1233
Score = 103 bits (257), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 195/459 (42%), Gaps = 44/459 (9%)
Query: 139 LGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSL 198
LG ++ P +N +++++ +L+PI D+ V+D + G Q+ G +L
Sbjct: 377 LGREAIIAFKPRPLKN---LALVDELQSLSPITDLKVLDAQGTGAPQVYVLCGKGPRSAL 433
Query: 199 RIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEET 257
RI+++G+G+EE A +LPG + +W + D ++++F G + VL + G VEE
Sbjct: 434 RILQHGLGVEEMADNELPGRARAVWTTKLSHQSAFDGYIIVAFEGSSLVLQI-GDTVEEV 492
Query: 258 EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKN 317
F ++ + + + +QV + I +SK RV+ W P G+ I N+
Sbjct: 493 TDSLFLTNVSSLLVALMYDDSFIQVHETGIRHI-LKSK-RVNEWRTPGGRRIKAADANER 550
Query: 318 Q-VLCATGCDVYYLEVHGSE-IKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVG 375
Q V+ G ++ EV S + + A R + E C+ + + +A AVG
Sbjct: 551 QLVISLAGGELILFEVDESHTLVETARRNINVETTCMSMQAIPKGRL-----RASFLAVG 605
Query: 376 LWTDISARLLSLP---SLEEVCKEPLGGEIIPRSILMTCF---------------EGHCY 417
D R+LSL +L ++ + L P S+ + G Y
Sbjct: 606 -GLDNMVRILSLEKDRNLRQLATQLLPNNATPESVCLATLTGLGAHGKDAGKSEDNGVLY 664
Query: 418 LLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYS 477
L V L G M +DP G L D++ LG + + A S++ + Y+
Sbjct: 665 LHVGLNTGVMIRSVVDPVLGTLLDQRSRFLGGRAVRFHAVTLQGQPAILALSEKSWLCYT 724
Query: 478 SNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTFGTIDEIQKLHIRTVPLGEA 536
HKL + +N + + S +E D +A+A S F + +PL
Sbjct: 725 FQHKLHCTPLNYDPLECVASFCSEQCTDGFVAIAGGSLRIFRCQRLGETFSQTLLPLSFT 784
Query: 537 PRRIA---YQESSQTFGVITTRIDIQEADGSTPVRPSAS 572
PR +A + ++++ G + +A G P R +A+
Sbjct: 785 PRAMAALPHISATESQGAV-------DAAGVGPSRRAAA 816
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 5/163 (3%)
Query: 1061 QGRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLEC 1119
Q I +F YDD L + ++ ++ F G LLA + +RL+ ++ L+ +C
Sbjct: 940 QASIKVFSYDDKFSLNLVHSTPVEDYPMALAPFRGMLLAGVGHKLRLYALGKKRLLK-KC 998
Query: 1120 SHFNNIIAL-FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
+ N + F++V GD + VGDL S+ +++Y+ E F ++ D P W+T E+LD
Sbjct: 999 EYKNLPCGVAFIRVAGDRLFVGDLRESVHVMRYRLSENLFYVLADDVVPRWLTKGEVLDY 1058
Query: 1179 ELFLGAENSYNLFICQKDSAATSDE--DRTHLQEVGTVHLVGD 1219
F+ A+ ++FIC+ S A DE D T L+ G + D
Sbjct: 1059 HTFVAADKFDSVFICRVPSEAKQDELGDTTGLRLRGDTTYLTD 1101
>gi|331221690|ref|XP_003323519.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309302509|gb|EFP79100.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1213
Score = 103 bits (257), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 113/509 (22%), Positives = 216/509 (42%), Gaps = 57/509 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G LF + ++ E++ V+ K++ + + L+ L +G +FV + G+
Sbjct: 309 FLIQSEEGDLFKVTIDHEDE-----EVQALKIKYFDTVPVASNLSILKSGFLFVAAETGN 363
Query: 142 SQLVKLNRSPDEN---------------------GTY--------VSVMESFTNLAPIID 172
L + + D++ G + + + + +LAPI
Sbjct: 364 HALYQFEKLGDDDEETEFSSADYPEFGASGAALPGAFFKPRGLENLVLSDELESLAPITG 423
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
L Q V G SLR++R+G+ + E +LPG +W +
Sbjct: 424 AKTGHLLNSDSAQTVASCGTGSRSSLRMLRHGLEVSEIVTSELPGPPTNVWTTRLAETDE 483
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++L F+ T VL + G + E G ++ T +D +LQ+ P+ I
Sbjct: 484 FDRYIILGFLNATLVLAI-GETIVEVADTGLLTNSPTIAIQQLDSNGLLQIHPTGIRHIH 542
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVA 350
+ ++ W+ P G+ I V + N+ QV+ +G ++ Y E+ QL + E+
Sbjct: 543 LDGA--ITEWKVPPGRKIVVSTSNRRQVVIGLSGGELIYFELDLD--GQLNEYQEQKEMG 598
Query: 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS---LEEVCKEPLGGEIIPRSI 407
I+ LS E S + A+GL +++ +++SL LE + + L +P SI
Sbjct: 599 A-TITSLSLSEVSKGRQRTPFLAIGL-ENLTVQIISLDPNSVLETISLQALTA--VPTSI 654
Query: 408 LMTCF--------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
+ ++ + L +G + LD +G+LTD + LG++P L +
Sbjct: 655 CIAELLDSSIDKNSETLFVNIGLANGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLLRVKV 714
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
+ T+V S R + Y+ + L F + ++++ S +AE P+ L S+ T
Sbjct: 715 DNKTSVIGLSSRTWLNYTFQNLLHFDPLIYDAIDNVHSFSAELCPEGLIGIVGSSLRIFT 774
Query: 520 IDEIQ-KLHIRTVPLGEAPRRIAYQESSQ 547
I ++ K+ +PL PR++ SS+
Sbjct: 775 IPKLGVKVKQDAMPLAYTPRKMLLDPSSK 803
Score = 60.1 bits (144), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 1060 KQGRIIIFHY-DDGKLQQIAEK-EIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR- 1116
K G + ++ + +DGK ++ K E+ ++ F G+L A + +R+++ +K LR
Sbjct: 917 KNGFLRVYRFVNDGKAIELVHKTEVDEMPSALVGFQGRLAAGVGKALRIYDLGKKKLLRK 976
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
+E F + I + L V+G ILVGD S++ YK E + D P W T ++
Sbjct: 977 VENKSFGSAI-ISLSVQGSRILVGDSQDSVSYAVYKPAENRLIVFADDVVPRWTTCATMV 1035
Query: 1177 DDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
D + G + NL++ + K+ + DED T
Sbjct: 1036 DYDTVAGGDRFGNLWVSRLPKNVSDEVDEDPT 1067
>gi|358378986|gb|EHK16667.1| hypothetical protein TRIVIDRAFT_40938 [Trichoderma virens Gv29-8]
Length = 1212
Score = 103 bits (257), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 129/549 (23%), Positives = 220/549 (40%), Gaps = 72/549 (13%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G +F + ++ E +G T V+ K++ +
Sbjct: 297 MHKLKG--SAGAFF------FLLQTEDGDMFKVTIDMVEDDEGNTTGEVRRLKIKYFDTV 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDE-------------------NGTY--- 157
L L +G ++V S+ G+ + + D+ N Y
Sbjct: 349 PAAASLCILKSGFLYVASQFGNFSFYQFEKLGDDDEELEFTSDDFPVDAQASYNPVYFYP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+ ++ES ++ P++D V +L + Q+ T G + R +++G+ I E
Sbjct: 409 RPLENLVLVESIPSMNPLLDCKVANLTNEDAPQIYTICGNGARSTFRTLKHGLEINEIVS 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPGI +W L + + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGIPSAVWTLKLNRTEQYDAYIVLSFTNGTLVLSI-GETVEEVSDSGFLTSVPTLAA 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I +V+ W+ P +SI S N +QV A +G VY+
Sbjct: 528 QLLGDDGLIQVHPKG---IRHIRNGQVNQWDAPQHRSIVAASTNAHQVAIALSSGEIVYF 584
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V CL + E ++ AVG D + R+LSL
Sbjct: 585 EMDDDGSLAEYDEKKEMFGTVTCLSLG-----EVPEGRLRSSFLAVGC-DDCTVRILSLD 638
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRL 439
+LE + L P S+ + E YL + L G LD +G L
Sbjct: 639 PESTLENKSVQALTAA--PTSLAIISMEDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGEL 696
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCS 497
TD ++ LG + L T V S RP + Y+ V + +N + +
Sbjct: 697 TDTRQKFLGPKQVRLFQVTVQGKTCVLGLSSRPWLGYADPITKTFVVTPLNYVDLEWGWN 756
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITTRI 556
+E + + T ++D + I+ ++PL P+++ F VI
Sbjct: 757 FTSEQCEEGIVGIQGQTLRIFSVDRLGDTLIQSSIPLTYTPKKMVKHPDHPLFYVI---- 812
Query: 557 DIQEADGST 565
EAD T
Sbjct: 813 ---EADNHT 818
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 8/206 (3%)
Query: 1016 EILHAHQLFPGEYALSLISSKFGEDPN-TYFVLGTA---VVHPEENEPKQGRIIIFHYDD 1071
++L L E A+S+ F N T+ V+GT VV+P I F D
Sbjct: 870 QVLQRIDLEENEAAVSVAIVTFASQENETFLVVGTGKDMVVNPRSFSDAFVHIYRFERDG 929
Query: 1072 GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLK 1131
L I + +++ +M F G++L I T+R+++ + LR + + L
Sbjct: 930 RGLVFIHKTKVEEPPMAMIPFQGRVLVGIGKTLRIYDLGMRQLLRKAQAEVAPQQIISLS 989
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
+G I+VGD+ + +T YK D W T ++D E G + N+F
Sbjct: 990 TQGSRIVVGDVQQGITYAVYKQSTNKLIPFVDDTVARWTTCTTMVDYETVAGGDKFGNIF 1049
Query: 1192 ICQKDSAATSDEDRTHLQEVGTVHLV 1217
I + A+ + D +E +HL+
Sbjct: 1050 IVRSPQKASEEAD----EEQAGLHLL 1071
>gi|331238007|ref|XP_003331659.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309310649|gb|EFP87240.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1213
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 113/509 (22%), Positives = 215/509 (42%), Gaps = 57/509 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G LF + ++ E++ V+ K++ + + L+ L +G +FV + G+
Sbjct: 309 FLIQSEEGDLFKVTIDHEDE-----EVQALKIKYFDTVPVASNLSILKSGFLFVAAETGN 363
Query: 142 SQLVKLNRSPDEN---------------------GTYVS--------VMESFTNLAPIID 172
L + + D++ G + + + +LAPI
Sbjct: 364 HALYQFEKLGDDDEETEFSSADYPEFGASGAALPGAFFKPRGLENLVLSDELESLAPITG 423
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
L Q V G SLR++R+G+ + E +LPG +W +
Sbjct: 424 AKTGHLLNSDSAQTVASCGTGSRSSLRMLRHGLEVSEIVTSELPGPPTNVWTTRLAETDE 483
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++L F+ T VL + G + E G ++ T +D +LQ+ P+ I
Sbjct: 484 FDRYIILGFLNATLVLAI-GETIVEVADTGLLTNSPTIAIQQLDSNGLLQIHPTGIRHIH 542
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVA 350
+ ++ W+ P G+ I V + N+ QV+ +G ++ Y E+ QL + E+
Sbjct: 543 LDGA--ITEWKVPPGRKIVVSTSNRRQVVIGLSGGELIYFELDLD--GQLNEYQEQKEMG 598
Query: 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS---LEEVCKEPLGGEIIPRSI 407
I+ LS E S + A+GL +++ +++SL LE + + L +P SI
Sbjct: 599 A-TITSLSLSEVSKGRQRTPFLAIGL-ENLTVQIISLDPNSVLETISLQALTA--VPTSI 654
Query: 408 LMTCF--------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
+ ++ + L +G + LD +G+LTD + LG++P L +
Sbjct: 655 CIAELLDSSIDKNSETLFVNIGLANGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLLRVKV 714
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
+ T+V S R + Y+ + L F + ++++ S +AE P+ L S+ T
Sbjct: 715 DNKTSVIGLSSRTWLNYTFQNLLHFDPLIYDAIDNVHSFSAELCPEGLIGIVGSSLRIFT 774
Query: 520 IDEIQ-KLHIRTVPLGEAPRRIAYQESSQ 547
I ++ K+ +PL PR++ SS+
Sbjct: 775 IPKLGVKVKQDAMPLAYTPRKMLLDPSSK 803
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 1060 KQGRIIIFHY-DDGKLQQIAEK-EIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR- 1116
K G + ++ + +DGK+ ++ K E+ ++ F G+L A + +R+++ +K LR
Sbjct: 917 KNGFLRVYRFVNDGKVIELVHKTEVDEMPSALVGFQGRLAAGVGKALRIYDLGKKKLLRK 976
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
+E F + I + L V+G ILVGD S++ YK E + D P W T ++
Sbjct: 977 VENKSFGSAI-ISLSVQGSRILVGDSQDSVSYAVYKPAENRLIVFADDVVPRWTTCATMV 1035
Query: 1177 DDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
D + G + NL++ + K+ + DED T
Sbjct: 1036 DYDTVAGGDRFGNLWVSRLPKNVSDEVDEDPT 1067
>gi|296814646|ref|XP_002847660.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
gi|238840685|gb|EEQ30347.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
Length = 1235
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 183/461 (39%), Gaps = 49/461 (10%)
Query: 82 YLLGDLAGRLFMLLLE--KEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L +E ++E T VK K++ + + L L +G +FV S
Sbjct: 306 FLLQSEDGDLFKLTMEMVEDENEQATGEVKRLKLKYFDTVPLASSLCILKSGFLFVASET 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++ES +L P++
Sbjct: 366 GNQHFYQFEKLGDDDDEIEFISDDYSADLTEPLPPVYFRPRPAENLNLVESIASLNPLMS 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+ +L + QL T G S R +++G+ + E +LP + +W +
Sbjct: 426 CSIANLTEEDAPQLYTLCGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQ 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D +VLSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 YDAYIVLSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADQ--RVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E ++ AVG D + R+LSL +LE + L
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPESTLENKSVQALTSAPSAL 656
Query: 406 SILM----TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ T YL + L G LD +G L+D + LG +P L
Sbjct: 657 SIMSMIDSTSGGPTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFGVSVKE 716
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAES 502
V A S R + YS + F+ L V S N S
Sbjct: 717 QRAVLALSSRSWLGYSDVQTMSFTLTPLNYVGLEWSWNFSS 757
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N ++ +L E A+S+ + F ++ T+ V+GT VV P I F
Sbjct: 864 NAKAVMSRIELEDNEAAVSIAAVSFTSQEDETFLVVGTGKGMVVSPRSFTCGFIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
+ +L+ I + +++ ++ F G+LLA I +R+++ + LR + + +
Sbjct: 924 EEGKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIV 983
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK E + + D P W T ++D E G +
Sbjct: 984 GLQTQGSRIIVSDVQESVTYVVYKYQENNLIPFADDIIPRWTTCTTMVDYETVAGGDKFG 1043
Query: 1189 NLFI--CQKDSAATSDED 1204
N+++ C ++ +DED
Sbjct: 1044 NIWLLRCPPKASEEADED 1061
>gi|358348136|ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
gi|355504040|gb|AES85243.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
Length = 1370
Score = 103 bits (256), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 217/528 (41%), Gaps = 96/528 (18%)
Query: 118 EISIPECL---------TYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLA 168
++S+ ECL ++ G + +GDS ++KL D + ++++ N+A
Sbjct: 410 KLSLSECLYKGLPCKELLWVKEGYLASIVEMGDSVVLKLK---DGRLCFTNLIQ---NIA 463
Query: 169 PIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEE--HACIDLPGIKGIWALSI 226
PI D+ D + Q+ C G EGSLR+I++GI +E+ G+ G W + +
Sbjct: 464 PIFDVTSGDYHDEKHDQMFACCGVTPEGSLRVIQSGINVEKLLRTPSTYEGVAGTWTVRM 523
Query: 227 GSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSA 286
+ LVLSF+G TR+L++ + + T+ GF + T CG V ++Q+ SA
Sbjct: 524 KISDQYHSFLVLSFLGETRILSVGLSFTDVTDSVGFQPNVCTLACGLVSDGLLVQIYQSA 583
Query: 287 AIL-ISTE---------SKARVSSWEPPN--------GKSISVVSCNKNQVLCATGCDVY 328
L + T+ S +SW P N G + VVS + L G V
Sbjct: 584 VKLCLPTKDGHSEGIPLSSPICTSWYPDNLNISLGAVGHNFIVVSTSNPCFLFILG--VR 641
Query: 329 YLEVHGSEIKQLAHRALEYEVACLDISPL----SNEETSSEPAKAQLAAVGLWTDISARL 384
L + EI ++ H L+ EV+C+ I +S + +A+ DI+
Sbjct: 642 MLSAYQYEIYEMQHLELQNEVSCISIPRTKYGKKRSNSSISENNSSMASTVSGVDINKTF 701
Query: 385 L---SLPSLEEVCKEPLGGE--------------------IIPRSILMTCFEGHCYLLVA 421
+ PS+E +P GG IP+ + + F Y+L
Sbjct: 702 VIGTHRPSVEIWSFDPNGGVTVVACGTISLKSTAGTAKSFCIPQDVRLV-FVDKYYVLAG 760
Query: 422 LGDGSMFYFS-------------LDPASGRLTDKKKVTLGTQ---PTVLK--TFRSLSTT 463
L +G + F +D A + T+ P +L+ R + T
Sbjct: 761 LRNGMLLRFEWPTEPSHSSSINVVDTALSSINLVNSTTMAINVNLPCMLQLIAIRRIGIT 820
Query: 464 NVF-------------ACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALA 510
VF A SDRP +++S+ H + +++++ + +H + + P +
Sbjct: 821 PVFLVPLDDTLDADIIALSDRPWLLHSARHSISYTSISFQPSSHATPVCSIDCPKGILFV 880
Query: 511 TDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDI 558
+++ + ++L++R L PR++ Y SQ V+ T + I
Sbjct: 881 AENSLHLVEMVYSKRLNMRKFHLKGTPRKVLYHNESQMLLVMRTELSI 928
Score = 41.2 bits (95), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLR+I++GI +E+ G+ G W + + + LVLSF+G TR+L++
Sbjct: 490 EGSLRVIQSGINVEKLLRTPSTYEGVAGTWTVRMKISDQYHSFLVLSFLGETRILSV 546
>gi|189044515|sp|Q7RYR4.2|RSE1_NEUCR RecName: Full=Pre-mRNA-splicing factor rse-1
Length = 1209
Score = 103 bits (256), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 188/453 (41%), Gaps = 53/453 (11%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E DG T VK K++ I
Sbjct: 297 MHKLKG--SAGAFF------FLLQTDDGDLFKVTIDMIEDSDGNPTGEVKRLKIKYFDTI 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDE-------------------NGTY--- 157
+ L L +G +F S G+ + + D+ N Y
Sbjct: 349 PVATSLCILKSGFLFAASEFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+ ++ES ++ P +D V +L + Q+ + G + R++++G+ + E
Sbjct: 409 RPLENLVLVESIDSMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPG +W + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGTPSAVWTTKLTKYDQYDAYIVLSFTNGTLVLSI-GETVEEVSDSGFLTTAPTLAV 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYL 330
+ ++QV P I + RV+ W P +SI + N+NQV+ A + ++ Y
Sbjct: 528 QQMGEDGLIQVHPKG---IRHIVQGRVNEWPAPQHRSIVAATANENQVVIALSSGEIVYF 584
Query: 331 EVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--- 387
E+ LA + E++ ++ LS + ++ AVG D + R+LSL
Sbjct: 585 EMDSD--GSLAEYDEKKEMSGT-VTSLSVGQVPEGLKRSSFLAVGC-DDCTVRILSLDPD 640
Query: 388 PSLEEVCKEPLGGEIIPRSILMT--CFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKK 444
+LE + L SI+ F G YL + L G LD +G LTD ++
Sbjct: 641 STLEMKSIQALTAAPSALSIMSMEDSFGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQ 700
Query: 445 VTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYS 477
LG +PT L V A S RP + Y+
Sbjct: 701 KFLGPKPTRLFQVSVQDQPCVLALSSRPWLGYT 733
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 8/180 (4%)
Query: 1029 ALSLISSKFGEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGA 1085
A+ +S+ GE ++ V+GT V+ P + + FH D L+ I + ++
Sbjct: 884 AIVPFASQEGE---SFLVVGTGKDMVLDPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEP 940
Query: 1086 CYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRS 1145
++ F G+LLA + T+R+++ ++ LR + + + L+ +G+ I+VGDL +
Sbjct: 941 PLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSLQSQGNRIIVGDLQQG 1000
Query: 1146 LTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAATSDE 1203
+T + YK + D W T ++D E G + N++I C + + +DE
Sbjct: 1001 ITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQETDE 1060
>gi|350290373|gb|EGZ71587.1| Pre-mRNA-splicing factor rse-1 [Neurospora tetrasperma FGSC 2509]
Length = 1209
Score = 103 bits (256), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 188/453 (41%), Gaps = 53/453 (11%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E DG T VK K++ I
Sbjct: 297 MHKLKG--SAGAFF------FLLQTDDGDLFKVTIDMIEDSDGNPTGEVKRLKIKYFDTI 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDE-------------------NGTY--- 157
+ L L +G +F S G+ + + D+ N Y
Sbjct: 349 PVATSLCILKSGFLFAASEFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+ ++ES ++ P +D V +L + Q+ + G + R++++G+ + E
Sbjct: 409 RPLENLVLVESIDSMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPG +W + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGTPSAVWTTKLTKYDQYDAYIVLSFTNGTLVLSI-GETVEEVSDSGFLTTAPTLAV 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYL 330
+ ++QV P I + RV+ W P +SI + N+NQV+ A + ++ Y
Sbjct: 528 QQMGEDGLIQVHPKG---IRHIVQGRVNEWPAPQHRSIVAATANENQVVIALSSGEIVYF 584
Query: 331 EVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--- 387
E+ LA + E++ ++ LS + ++ AVG D + R+LSL
Sbjct: 585 EMDSD--GSLAEYDEKKEMSGT-VTSLSVGQVPEGLKRSSFLAVGC-DDCTVRILSLDPD 640
Query: 388 PSLEEVCKEPLGGEIIPRSILMT--CFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKK 444
+LE + L SI+ F G YL + L G LD +G LTD ++
Sbjct: 641 STLEMKSIQALTAAPSALSIMSMEDSFGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQ 700
Query: 445 VTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYS 477
LG +PT L V A S RP + Y+
Sbjct: 701 KFLGPKPTKLFQVSVQDQPCVLALSSRPWLGYT 733
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 8/180 (4%)
Query: 1029 ALSLISSKFGEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGA 1085
A+ +S+ GE ++ V+GT V+ P + + FH D L+ I + ++
Sbjct: 884 AIVPFASQEGE---SFLVVGTGKDMVLDPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEP 940
Query: 1086 CYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRS 1145
++ F G+LLA + T+R+++ ++ LR + + + L+ +G+ I+VGDL +
Sbjct: 941 PLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSLQSQGNRIIVGDLQQG 1000
Query: 1146 LTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAATSDE 1203
+T + YK + D W T ++D E G + N++I C + + +DE
Sbjct: 1001 ITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQETDE 1060
>gi|357478269|ref|XP_003609420.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355510475|gb|AES91617.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 1225
Score = 103 bits (256), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 203/496 (40%), Gaps = 56/496 (11%)
Query: 104 GTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN----GTYVS 159
G V E ++ I++ + L +G +F S G+ L + D++ + S
Sbjct: 324 GGDRVSELNIKYFDTIAVAVSICVLKSGFLFAASEFGNHALYQFKGIGDDDNDVGASSAS 383
Query: 160 VMES----------------------FTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGS 197
+ME+ +L P++DM V +L + Q+ T G S
Sbjct: 384 LMETEEGFQPVFFQPRRLKNLVRIDQVESLMPVMDMKVSNLFEEETPQIFTLCGRGPRSS 443
Query: 198 LRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEE 256
LRI+R G+ + E A LPGI +W + D +V+SF T VL++ G +E
Sbjct: 444 LRIMRTGLAVSEMAVSKLPGIPSAVWTVKKNVMDEFDAYIVVSFTNATLVLSI-GETADE 502
Query: 257 TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNK 316
GF + + +++QV P+ I + R + W+ ++I+ V N+
Sbjct: 503 VSDSGFLDTAPSLAVSLIGDDSLMQVHPNGIRHIRED--GRTNEWQTSGKRTIAKVGSNR 560
Query: 317 NQVLCA-TGCDVYYLEVH-GSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAV 374
QV+ A G ++ Y EV ++ ++ + +VACLDI+P+ +++ AV
Sbjct: 561 LQVVIALNGGELIYFEVDVTGQLMEVERHEMSGDVACLDIAPVPKGRL-----RSRFLAV 615
Query: 375 GLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMTCFEGHC------------YLL 419
G + D + R+LSL + C + LG + + P S+L + +L
Sbjct: 616 GSY-DKTIRILSLDP--DDCMQTLGIQSLSSAPESLLFLEVQASVGGEDGADHPASLFLN 672
Query: 420 VALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
L +G + +D +G L+D + LG + L + S RP + Y
Sbjct: 673 AGLQNGVLSRTVVDMVTGLLSDTRSRFLGLKAPKLFPIIVRGKRAMLCLSSRPWLGYIHQ 732
Query: 480 HKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPR 538
+ + ++ + + S +++ + + T++ + + + +PL PR
Sbjct: 733 GHFLLTPLSYETLEYAASFSSDQCFEGVVSVASEALRIFTVERLGETFNQNVIPLRYTPR 792
Query: 539 RIAYQESSQTFGVITT 554
+ Q + VI +
Sbjct: 793 KFVLQPKRKLLVVIES 808
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 13/213 (6%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLGTAVVHPEENEPKQ- 1061
V + ++D T +L E A S+ + F + + T +GTA + PK+
Sbjct: 871 VSCIRVLDPRTGNTTCLLELQENEAAFSICTVNFHDKEYGTLLAVGTA--KGLQFTPKRS 928
Query: 1062 ---GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR 1116
G I I+ + DDG+ L+ + + +++G ++C+F G+LLA I +RL++ + LR
Sbjct: 929 LTAGFIHIYRFLDDGRSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKRRLLR 988
Query: 1117 -LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
E F + I + + D I VG + S +Y+ E + D P W+TS
Sbjct: 989 KCENKSFPSSI-VSIHAYRDRIYVGGIQESFHYCKYRRDENQLYIFADDSVPRWLTSSYH 1047
Query: 1176 LDDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
+D + GA+ N+F + +D + +ED T
Sbjct: 1048 IDFDTMAGADKFGNIFFARLPQDVSDEIEEDPT 1080
>gi|125580741|gb|EAZ21672.1| hypothetical protein OsJ_05303 [Oryza sativa Japonica Group]
Length = 1224
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 118/516 (22%), Positives = 222/516 (43%), Gaps = 64/516 (12%)
Query: 91 LFMLLLEKEE----KMDGTFS---VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQ 143
LF LL+ E K+D S V E +++ I + + L +G +F S G+
Sbjct: 300 LFFFLLQTEYGDIFKVDLEHSNDTVTELRIKYFDTIPVTSAICVLRSGFLFAASEFGNHA 359
Query: 144 LVK---LNRSPDENGTYVSVMES----------------------FTNLAPIIDMVVVDL 178
L + + R D + ++ME+ +L PI+DM V +L
Sbjct: 360 LYQFRDIGRDVDVESSSATLMETDEGFQPVFFQPRALKNLYRIDEIESLMPIMDMRVANL 419
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK-GIWALSIGSPKNLDNTLV 237
+ Q+ T G +LRI+R G+ I E A LP +W + D +V
Sbjct: 420 FDEETPQVFTACGRGPRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKNINDMFDAYIV 479
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SF T VL++ G +EE F + + +++QV P+ I + R
Sbjct: 480 VSFANVTLVLSI-GETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHIRED--GR 536
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDIS 355
V+ W P K+I+ V N+ QV+ A +G ++ Y E+ + ++ ++ + + +VACL I+
Sbjct: 537 VNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAIA 596
Query: 356 PLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMTCF 412
P+ +++ AVG + D + R+LS+ + C +PL + + P S++
Sbjct: 597 PVPEGRQ-----RSRFLAVGSF-DNTIRILSVDP--DDCLQPLSVQSVSSAPESLMFLEV 648
Query: 413 E------------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
+ + +L L +G +F ++D +G+L+D + LG +P L
Sbjct: 649 QASVGGEDGADHPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVS 708
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTFGT 519
+ S RP + Y + + ++ + S +++ + +A+A D+ F T
Sbjct: 709 HRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIF-T 767
Query: 520 IDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
I+ + + + +PL PR+ + VI +
Sbjct: 768 IEHLGETFNETAIPLRYTPRKFVILPKKKYLAVIES 803
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLGTA---VVHPEENEP 1059
V + I+D + + +L E A+S+ + F + + T +GTA P+ N
Sbjct: 870 VSCIRILDPKSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNL- 928
Query: 1060 KQGRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR- 1116
G I I+ + D+G+ L+ + + +++ ++C+F G+LLA + S +RL++ K LR
Sbjct: 929 SAGFIHIYKFVDEGRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRK 988
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
E F I + + D I VGD+ S +Y+ E + D P W+T+ +
Sbjct: 989 CENKLFPRTI-VSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHI 1047
Query: 1177 DDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
D + GA+ N++ + +D + +ED T
Sbjct: 1048 DFDTMAGADKFGNIYFARLPQDLSDEIEEDPT 1079
>gi|221061705|ref|XP_002262422.1| splicing factor 3b, subunit 3, 130kd [Plasmodium knowlesi strain H]
gi|193811572|emb|CAQ42300.1| splicing factor 3b, subunit 3, 130kd, putative [Plasmodium knowlesi
strain H]
Length = 1276
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/503 (21%), Positives = 211/503 (41%), Gaps = 67/503 (13%)
Query: 90 RLFMLLLEKE---------EKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
+ F +L++ E + DG VKE + + + + + +G +FV + G
Sbjct: 297 KFFFILIQSEYGDLYKIEMDHQDGV--VKEITCKYFDTVPVANAICVMKSGSLFVAAEFG 354
Query: 141 DSQLVKLNRSPDENG-----------------------TYVSVMESFTNLAPIIDMVVVD 177
+ + + D++ T + +++ +L+PI+DM ++D
Sbjct: 355 NHFFYQFSGIGDDDNEAMCTSKHPSGRNAIIAFRTKKLTNLFLIDQVYSLSPILDMKILD 414
Query: 178 LERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTL 236
+ Q+ G SLRI+++G+ IEE A +LPG K IW + + + D +
Sbjct: 415 AKNANSPQIYALCGRGPRSSLRILQHGLSIEELADNELPGRPKYIWTIKKDNASDYDGYI 474
Query: 237 VLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKA 296
++SF G T +L + G VEE ++ T + + +++QV + I+ +
Sbjct: 475 IVSFEGSTLILEI-GETVEEVVDTLLLTNVTTIHVNILYDNSLIQVHDTGIRHINGKV-- 531
Query: 297 RVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSE-IKQLAHRALEYEVACLDI 354
++ W PP K + + N Q++ + +G ++ Y E+ S + ++ ++L E+ CL I
Sbjct: 532 -INEWVPPKNKQVKAATSNATQIVISLSGGELIYFEIDESHSLVEIFRKSLNVEILCLSI 590
Query: 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPR--SILMTCF 412
+E +A AVG ++ RLLS+ +E L I+P S C
Sbjct: 591 -----QEVEENKVRANFLAVGCLDNV-VRLLSIE--KEKYFNQLSTFILPNNSSAQDICI 642
Query: 413 EGHC-----------YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
C +L + L +G + +DP +G LT+ LG + +
Sbjct: 643 SEMCELGNDKERKLLFLNIGLNNGVLLRSVVDPITGTLTNHYSKYLGAKNVKICPVHVKK 702
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST---FTFG 518
+ ++ + Y K ++S +N + + S ++E D + S+ F F
Sbjct: 703 NPALLVLCEKTYLCYVHQGKYIYSPLNYDILEYASSFHSEQCSDGYVAISGSSLRIFRFY 762
Query: 519 TIDEIQKLHIRTVPLGEAPRRIA 541
+ E+ +I + L PR+I
Sbjct: 763 RLGEVFSQNI--LHLSFTPRKIV 783
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 1074 LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALF-LKV 1132
L I E + C+S FNG+LLAS+ + +R++ +K+L +C + + A+ +KV
Sbjct: 999 LLHITPVEDQPFCFS--PFNGRLLASVGNKLRIYAL-GKKKLLKKCEYKDIPEAIISIKV 1055
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI 1192
GD I D+ S+ + Y + IS D P W+T EILD + A+ ++F+
Sbjct: 1056 SGDRIFASDIRESVLVFFYDANMNALRLISDDIIPRWITCSEILDHHTIMAADKFDSVFV 1115
Query: 1193 CQKDSAATSDE 1203
+ A +E
Sbjct: 1116 LRVPEEAKQEE 1126
>gi|302820387|ref|XP_002991861.1| hypothetical protein SELMODRAFT_448595 [Selaginella moellendorffii]
gi|300140399|gb|EFJ07123.1| hypothetical protein SELMODRAFT_448595 [Selaginella moellendorffii]
Length = 1292
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 202/484 (41%), Gaps = 68/484 (14%)
Query: 125 LTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQG 184
L + +G + +GD ++K+ E+G +S N+API+D +VD + Q
Sbjct: 398 LLWTSDGFMTAMIEMGDGHVLKV-----EDGQ-LSFQSFVQNIAPILDFSLVDYYGEKQD 451
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACID--LPGIKGIWALSIGSPKNLDNTLVLSFVG 242
Q+ C GG +EGS+RIIRNG +E+ C G+ GIW + ++SFV
Sbjct: 452 QMFACCGGDEEGSVRIIRNGNSVEKLICTPPVYQGVSGIWTMRYRFKDPYHAFFLISFVE 511
Query: 243 HTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR----- 297
TRVL++ V+ T+ GF S T CG V+ V QV L S A
Sbjct: 512 ETRVLSVGLNFVDITDAVGFESQVNTLACGLVEDGWVAQVWRYEVKLCSPTKAAHPAGVS 571
Query: 298 -----VSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGS-------EIKQLAHRAL 345
++W P G ISV + +++V+ A L + + E+ +L +
Sbjct: 572 GSNPLSTTWRKP-GYPISVGAVCRSRVILALARPGLLLMLGATQTSDGSFELVELQLCMM 630
Query: 346 EYEVACLDISPLSNEETSSEPAKAQLAA---VGLWTDI-----------SARLLSLPSLE 391
E E++C+ I P + P A L A V D+ S LLS+ +
Sbjct: 631 EAEISCISI-PQGDISIPVPPTIAGLHAGNTVPAGLDLGNVCVVGTHKPSVELLSIVPGD 689
Query: 392 EVCKEPLG------------GEIIPRSILMTCFEGHCYLLVALGDGSMFYFSL------- 432
+ +G IP+ + + F+ Y+L L +G + +
Sbjct: 690 KFAPFAVGQVSLITSVGTAVSGCIPQDVRLALFD-RLYILAGLRNGMLLRYEWPEDTPSL 748
Query: 433 ---DPASGRLTDKKKVTLGTQPTVLKTFRSLS-TTNVFACSDRPTVIYSSNHKLVFSNVN 488
PA L ++ LG P L + + ++ A SDRP ++ + ++ +++++
Sbjct: 749 VLSKPAQLHLVAARR--LGVSPVCLVPLEACALRADIIALSDRPWLLQMAK-RISYTSIS 805
Query: 489 LRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQT 548
+ H + ++ P + D + +++ + L+++ + LG RR+ Y S
Sbjct: 806 FQPSTHATPVCSKDCPKGIIFLADCSLHLVEMEQSRTLNVQKLHLGCTGRRVLYHPESGV 865
Query: 549 FGVI 552
V+
Sbjct: 866 LIVL 869
>gi|357528934|sp|Q5B1X8.2|RSE1_EMENI RecName: Full=Pre-mRNA-splicing factor rse1
gi|259485100|tpe|CBF81885.1| TPA: Pre-mRNA-splicing factor rse1
[Source:UniProtKB/Swiss-Prot;Acc:Q5B1X8] [Aspergillus
nidulans FGSC A4]
Length = 1209
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 182/445 (40%), Gaps = 53/445 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L L+ E G T VK K++ + + L L +G ++V +
Sbjct: 306 FLLQTEDGDLFKLTLDMVEDDKGQLTGEVKGLKIKYFDTVPLASSLLILKSGFLYVAAEG 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++E+ +L P++D
Sbjct: 366 GNHHFYQFEKLGDDDEETEFNSDDFSADPAAPCTPVYFQPRGAENLNLVEAINSLNPLVD 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
VV++ Q+ T SG + R +++G+ + E +LP + +W +
Sbjct: 426 SKVVNISEDDAPQIFTVSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRADE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D +VLSF T VL++ G VEE GF S T + +++Q+ P I
Sbjct: 486 FDAYIVLSFANGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHIL 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ L+ GS + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFELDADGSLAEYDERRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V CL + E ++ AVG D + R+LSL S++ + P
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDTTLENKSVQALTAAPSAL 656
Query: 401 EIIPRSILMTCFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
II ++ + G YL + L G +LD +G L+D + LG++ L
Sbjct: 657 NII--AMADSSSGGTTLYLHIGLHSGVYLRTALDEVTGELSDTRTRFLGSKAVKLFQVSV 714
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVF 484
T V A S RP + YS F
Sbjct: 715 TGQTAVLALSSRPWLGYSDTQTKGF 739
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 1017 ILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDG 1072
++ A +L E A+S+ + F +D T+ V+GTA V+P + I F D
Sbjct: 868 VVGAVELEENEAAVSIAAVPFTSQDDETFLVVGTAKDMTVNPPSSAGGYIHIYRFQEDGK 927
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
+L+ I + +++ ++ F G+LLA + S +R+++ ++ LR + + L+
Sbjct: 928 ELEFIHKTKVEEPPLALLGFQGRLLAGVGSVLRIYDLGMKQLLRKCQAAVAPKAIVGLQT 987
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI 1192
+G I+V D+ S+T + YK + D W T+ ++D E G + NL++
Sbjct: 988 QGSRIVVSDVRESVTYVVYKYQDNVLIPFVDDSIARWTTAATMVDYETTAGGDKFGNLWL 1047
Query: 1193 --CQKDSAATSDE---------DRTHLQ 1209
C K ++ +DE DR +LQ
Sbjct: 1048 VRCPKKASEEADEEGSGAHLIHDRGYLQ 1075
>gi|67538564|ref|XP_663056.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
gi|40743422|gb|EAA62612.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
Length = 1226
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 182/445 (40%), Gaps = 53/445 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L L+ E G T VK K++ + + L L +G ++V +
Sbjct: 306 FLLQTEDGDLFKLTLDMVEDDKGQLTGEVKGLKIKYFDTVPLASSLLILKSGFLYVAAEG 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++E+ +L P++D
Sbjct: 366 GNHHFYQFEKLGDDDEETEFNSDDFSADPAAPCTPVYFQPRGAENLNLVEAINSLNPLVD 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
VV++ Q+ T SG + R +++G+ + E +LP + +W +
Sbjct: 426 SKVVNISEDDAPQIFTVSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRADE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D +VLSF T VL++ G VEE GF S T + +++Q+ P I
Sbjct: 486 FDAYIVLSFANGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHIL 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ L+ GS + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFELDADGSLAEYDERRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V CL + E ++ AVG D + R+LSL S++ + P
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDTTLENKSVQALTAAPSAL 656
Query: 401 EIIPRSILMTCFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
II ++ + G YL + L G +LD +G L+D + LG++ L
Sbjct: 657 NII--AMADSSSGGTTLYLHIGLHSGVYLRTALDEVTGELSDTRTRFLGSKAVKLFQVSV 714
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVF 484
T V A S RP + YS F
Sbjct: 715 TGQTAVLALSSRPWLGYSDTQTKGF 739
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 1017 ILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDG 1072
++ A +L E A+S+ + F +D T+ V+GTA V+P + I F D
Sbjct: 868 VVGAVELEENEAAVSIAAVPFTSQDDETFLVVGTAKDMTVNPPSSAGGYIHIYRFQEDGK 927
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
+L+ I + +++ ++ F G+LLA + S +R+++ ++ LR + + L+
Sbjct: 928 ELEFIHKTKVEEPPLALLGFQGRLLAGVGSVLRIYDLGMKQLLRKCQAAVAPKAIVGLQT 987
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI 1192
+G I+V D+ S+T + YK + D W T+ ++D E G + NL++
Sbjct: 988 QGSRIVVSDVRESVTYVVYKYQDNVLIPFVDDSIARWTTAATMVDYETTAGGDKFGNLWL 1047
Query: 1193 --CQKDSAATSDE---------DRTHLQ 1209
C K ++ +DE DR +LQ
Sbjct: 1048 VRCPKKASEEADEEGSGAHLIHDRGYLQ 1075
>gi|42409127|dbj|BAD10377.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa
Japonica Group]
gi|42409258|dbj|BAD10521.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa
Japonica Group]
gi|125538000|gb|EAY84395.1| hypothetical protein OsI_05771 [Oryza sativa Indica Group]
Length = 1234
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 118/516 (22%), Positives = 222/516 (43%), Gaps = 64/516 (12%)
Query: 91 LFMLLLEKEE----KMDGTFS---VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQ 143
LF LL+ E K+D S V E +++ I + + L +G +F S G+
Sbjct: 310 LFFFLLQTEYGDIFKVDLEHSNDTVTELRIKYFDTIPVTSAICVLRSGFLFAASEFGNHA 369
Query: 144 LVK---LNRSPDENGTYVSVMES----------------------FTNLAPIIDMVVVDL 178
L + + R D + ++ME+ +L PI+DM V +L
Sbjct: 370 LYQFRDIGRDVDVESSSATLMETDEGFQPVFFQPRALKNLYRIDEIESLMPIMDMRVANL 429
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK-GIWALSIGSPKNLDNTLV 237
+ Q+ T G +LRI+R G+ I E A LP +W + D +V
Sbjct: 430 FDEETPQVFTACGRGPRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKNINDMFDAYIV 489
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
+SF T VL++ G +EE F + + +++QV P+ I + R
Sbjct: 490 VSFANVTLVLSI-GETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHIRED--GR 546
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDIS 355
V+ W P K+I+ V N+ QV+ A +G ++ Y E+ + ++ ++ + + +VACL I+
Sbjct: 547 VNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAIA 606
Query: 356 PLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILMTCF 412
P+ +++ AVG + D + R+LS+ + C +PL + + P S++
Sbjct: 607 PVPEGRQ-----RSRFLAVGSF-DNTIRILSVDP--DDCLQPLSVQSVSSAPESLMFLEV 658
Query: 413 E------------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
+ + +L L +G +F ++D +G+L+D + LG +P L
Sbjct: 659 QASVGGEDGADHPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVS 718
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTFGT 519
+ S RP + Y + + ++ + S +++ + +A+A D+ F T
Sbjct: 719 HRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIF-T 777
Query: 520 IDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
I+ + + + +PL PR+ + VI +
Sbjct: 778 IEHLGETFNETAIPLRYTPRKFVILPKKKYLAVIES 813
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLGTAV---VHPEENEP 1059
V + I+D + + +L E A+S+ + F + + T +GTA P+ N
Sbjct: 880 VSCIRILDPKSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNL- 938
Query: 1060 KQGRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR- 1116
G I I+ + D+G+ L+ + + +++ ++C+F G+LLA + S +RL++ K LR
Sbjct: 939 SAGFIHIYKFVDEGRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRK 998
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
E F I + + D I VGD+ S +Y+ E + D P W+T+ +
Sbjct: 999 CENKLFPRTI-VSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHI 1057
Query: 1177 DDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
D + GA+ N++ + +D + +ED T
Sbjct: 1058 DFDTMAGADKFGNIYFARLPQDLSDEIEEDPT 1089
>gi|340508225|gb|EGR33979.1| splicing factor subunit 130kda, putative [Ichthyophthirius
multifiliis]
Length = 983
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 147/308 (47%), Gaps = 28/308 (9%)
Query: 161 MESFTNLAPIIDMVVVDLERQGQGQLVT-CSGGFKEGSLRIIRNGIGIEEHACIDLPGI- 218
++ NL+ I D+ V DL +G Q+ T CS G++ SLRI+R+G+ + E A LPG+
Sbjct: 393 VDQLENLSAISDIKVSDLTGEGHPQIYTLCSAGYR-SSLRILRHGLQVNEVAASRLPGVP 451
Query: 219 KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRT 278
GIW + +N ++LSF T VL++S V++ G ++QT + ++
Sbjct: 452 TGIWTIKSRYDENFSKYIILSFSKQTLVLSISD-RVQQVTDSGIDLNKQTIHANLLEDNA 510
Query: 279 VLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEV-HGSEI 337
++QV P I + + + E GK + VS K + G D+ Y E+ + ++
Sbjct: 511 IIQVMPDGFRHIRVDKRVQQLKTE---GKIVKAVSNQKQIAISLQGGDIIYFELDYAGQL 567
Query: 338 KQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS---LEEVC 394
++A L+ E+ C+DI E K++ +VG +D S R+LSL + L+++
Sbjct: 568 IEVAKTNLQEEIECMDIG-----EVPFGRQKSKFLSVG-CSDHSVRILSLENDTCLQKIS 621
Query: 395 KEPLGGEIIPRSILMTCFEG----------HCYLLVALGDGSMFYFSLDPASGRLTDKKK 444
+ L G I L+ G YL V L +G + S+D +G L+D +
Sbjct: 622 IQALPG-IAENVSLIEMKRGSGLEQEAEQYQLYLYVGLKNGILLRASVDQITGSLSDTRT 680
Query: 445 VTLGTQPT 452
L P
Sbjct: 681 RVLSGAPV 688
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 1074 LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK-----ELRLECSHFNNIIAL 1128
L+ I + E+ S+ GKLLA + +R ++ +K E++ S N I
Sbjct: 704 LKLIHKTEVDDIPGSLHAHKGKLLAGCGTFLRYYDIGKKKLLKKSEVKGLQSPINGIQTF 763
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
GD I V + ++ ++++K E +F E+ D P WM++ ++LD ++G +
Sbjct: 764 -----GDRIFVSMVGDAVHIMKHKQKEQTFYEVCDDVLPRWMSAFQVLDYSTYIGGDKFE 818
Query: 1189 NLFICQKDSAATSDED 1204
N+F+C+ A + D
Sbjct: 819 NMFVCRIPQNAEEEMD 834
Score = 43.1 bits (100), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 3 SLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS 56
SLRI+R+G+ + E A LPG+ GIW + +N ++LSF T VL++S
Sbjct: 429 SLRILRHGLQVNEVAASRLPGVPTGIWTIKSRYDENFSKYIILSFSKQTLVLSIS 483
>gi|336257679|ref|XP_003343663.1| hypothetical protein SMAC_08834 [Sordaria macrospora k-hell]
gi|380091896|emb|CCC10625.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1209
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 124/531 (23%), Positives = 217/531 (40%), Gaps = 56/531 (10%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E DG T VK K++ I
Sbjct: 297 MHKLKG--SAGAFF------FLLQTDDGDLFKITIDMIEDADGNPTGEVKRLKIKYFDTI 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDE-------------------NGTY--- 157
+ L L +G +F S G+ + + D+ N Y
Sbjct: 349 PVATSLCILKSGFLFAASEFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+ ++ES ++ P +D V +L Q+ + G + R +++G+ + E
Sbjct: 409 RPLENLVLVESIDSMNPQVDCKVANLTGDDAPQIYSVCGNGARSTFRSLKHGLEVSEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPG +W + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGTPSAVWTTKLTKYDQYDAYIVLSFTNGTLVLSI-GETVEEVSDSGFLTTAPTLAV 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYL 330
+ ++QV P I + RV+ W P +SI + N+NQV+ A + ++ Y
Sbjct: 528 RQMGEDGLIQVHPKG---IRHIVQGRVNEWPAPQHRSIVAATANENQVVIALSSGEIVYF 584
Query: 331 EVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--- 387
E+ LA + E++ ++ LS + ++ AVG D + R+LSL
Sbjct: 585 EMDSD--GSLAEYDEKKEMSGT-VTSLSVGQVPEGLKRSSFLAVGC-DDCTVRILSLDPD 640
Query: 388 PSLEEVCKEPLGGEIIPRSILMT--CFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKK 444
+LE + L SI+ F G YL + L G LD +G LTD ++
Sbjct: 641 STLEMKSIQALTAAPSALSIMSMEDSFGGFTLYLHIGLHSGVYLRTVLDEVTGELTDTRQ 700
Query: 445 VTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCSLNAES 502
LG +PT L V A S RP + Y+ + + ++ ++ + + ++E
Sbjct: 701 KFLGPKPTKLFQVSVQDQPCVLALSSRPWLGYTDPLTKGFMMTPLSYTELEYGWNFSSEQ 760
Query: 503 YPDSLALATDSTFTFGTIDEIQKLHI-RTVPLGEAPRRIAYQESSQTFGVI 552
+ + + +I+++ I +++PL P+R+ F I
Sbjct: 761 CLEGMVGIHANYLRIFSIEKLGDNMIQKSIPLTYTPKRLVKHPEQPYFYTI 811
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 6/179 (3%)
Query: 1029 ALSLISSKFGEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGA 1085
A+ +S+ GE ++ V+GT V++P + + FH D L+ I + ++
Sbjct: 884 AIVPFASQEGE---SFLVVGTGKDMVLNPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEP 940
Query: 1086 CYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRS 1145
++ F G+LLA + T+R+++ ++ LR + + + L+ +G+ I+VGDL +
Sbjct: 941 PMALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSLQSQGNRIIVGDLQQG 1000
Query: 1146 LTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDED 1204
+T + YK D W T ++D E + N+ I + + D D
Sbjct: 1001 VTYVVYKAEGNRLIPFVDDTLNRWTTCTTMVDYESVASGDKFGNISIVRCPERVSQDTD 1059
>gi|298713790|emb|CBJ27162.1| spliceosomal protein sap, putative [Ectocarpus siliculosus]
Length = 1256
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 173/397 (43%), Gaps = 25/397 (6%)
Query: 161 MESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-K 219
++ +LAP+ DM+V DL R+ Q+ T G +LRI+R+G+ + E A DLPG+
Sbjct: 407 LDEVESLAPLTDMLVGDLAREDTPQMYTLCGRGNRSTLRILRHGLAVTELAENDLPGVPS 466
Query: 220 GIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTV 279
++A + D +VLSF T VL + + VEE E GF + T + +
Sbjct: 467 AVFAFKERLTDDYDRYIVLSFTNATMVLEVQDS-VEEVENSGFLATSSTLDVKLMANNKI 525
Query: 280 LQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS--E 336
LQV +I + W P K I N+ QV+ A G ++ + E+ +
Sbjct: 526 LQVYSHGLRVIMKGQPPQ--EWRAPGKKQIEKACANERQVVLALAGGEIIFFELDEAMQN 583
Query: 337 IKQLAHRAL-EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS---LEE 392
I+++ + L E+ACL++ E + +A AVG W + ++L L LE+
Sbjct: 584 IQEVGTKQLGGVEIACLEMG-----EVPKDRVRAPFLAVGDWNG-NVKILGLSPENLLEQ 637
Query: 393 VC----KEPLGGEIIPRSILMTCFEG---HCYLLVALGDGSMFYFSLDPASGRLTDKKKV 445
V P + G +L + L G ++D +G L+D ++
Sbjct: 638 VAMINLPHPAESLCLAHMAAEQAAGGSNEQLFLYIGLASGVCQRVAVDATAGTLSDPRQR 697
Query: 446 TLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPD 505
LG++P L + V A S R + Y+ + + ++ ++ + E P+
Sbjct: 698 FLGSKPVKLFRIQVQDKRGVLALSSRSWLSYNYQGRYQMTPLSYDPLDFAAEFSTEMCPE 757
Query: 506 S-LALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIA 541
+A++ + FG + + +PL PR+IA
Sbjct: 758 GVVAVSGEKLRIFGVERLGEVFNQAALPLKYTPRQIA 794
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
Query: 1027 EYALSLISSKFGEDPNTYFV-LGTA---VVHPEENEPKQGRII-IFHYDDGKLQQIAEKE 1081
E ALS+ F FV +GTA HP +E G + ++ + +L + + E
Sbjct: 929 EAALSVAPVAFHNRNGEAFVAVGTAKSLTFHPRGHE---GCFVHVYRILENRLVLLHKTE 985
Query: 1082 IKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGD 1141
+ +M EF G+LL + ++R+++ +K LR + + + L V GD + GD
Sbjct: 986 VPDVPLAMKEFQGRLLVGVGQSLRMYDLGRKKLLRKCENKRMPSMVVSLTVTGDRVFAGD 1045
Query: 1142 LMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATS 1201
M S +Y+ E E + D P +MT +LD + GA+ N+F+ + +
Sbjct: 1046 QMESCHCFKYRRAENRLVEFADDQVPRFMTKTCLLDYDSIAGADKFGNIFVLRVPLDVSD 1105
Query: 1202 DED 1204
D D
Sbjct: 1106 DVD 1108
>gi|119473054|ref|XP_001258481.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
181]
gi|119406633|gb|EAW16584.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
181]
Length = 1209
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 129/558 (23%), Positives = 222/558 (39%), Gaps = 58/558 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + ++ E G T VK K++ + I L L +G ++V S
Sbjct: 306 FLLQTEDGDLFKVTIDMVEDDSGQLTGEVKRLKIKYFDTVPIASNLLILKSGFLYVASEA 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++E+ +L P+ID
Sbjct: 366 GNHHFYQFEKLGDDDEETEFSSENFPADPSVPYEPVFFRPRGAENLNLVETLNSLNPLID 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+V+L Q+ T SG S R +++G+ + E +LP + +W +
Sbjct: 426 SKIVNLNEDDAPQIYTVSGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRADE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIILSFANGTLVLSI-GETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGIRHIL 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ G+ + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V CL + E ++ AVG D + R+LSL S++ + P
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656
Query: 401 EIIPRSILMTCFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
I+ S+ + G YL + L G LD +G L+D + LG + L
Sbjct: 657 NIM--SMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKQVKLFRVSV 714
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTF 517
T V A S RP + YS F L V N +E + +
Sbjct: 715 KGQTAVLALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQAQNLRI 774
Query: 518 GTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQ 576
+I+++ ++ ++PL PRR+ F VI + D +T R ++A+
Sbjct: 775 FSIEKLDNNILQESIPLSNTPRRMLKHPEQPLFYVIES--DNNVLSPATRARLIEDSKAR 832
Query: 577 NTTSSTISSLSYIKPGST 594
N ++ + + P +T
Sbjct: 833 NGETNVLPPEDFGYPRAT 850
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 9/198 (4%)
Query: 1027 EYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082
E A+S+ + F +D T+ V+GTA +V+P + I F D +L+ I + ++
Sbjct: 878 EAAVSMAAVPFSSQDDETFLVVGTAKDMIVNPPSSAGGFIHIYRFQEDGKELEFIHKTKV 937
Query: 1083 KGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDL 1142
+ ++ F G+LLA I ST+R+++ ++ LR + + + L+ +G I+V D+
Sbjct: 938 EEPPLALLGFQGRLLAGIGSTLRVYDLGMKQLLRKCQAPVVSKTIVGLQTQGSRIIVSDV 997
Query: 1143 MRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAAT 1200
S+T + YK E D W TS ++D E G + NL++ C K +
Sbjct: 998 RESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKVSEE 1057
Query: 1201 SDEDRT--HL-QEVGTVH 1215
+DED + HL E G +H
Sbjct: 1058 ADEDGSGAHLIHERGYLH 1075
>gi|124806507|ref|XP_001350742.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium
falciparum 3D7]
gi|23496869|gb|AAN36422.1|AE014849_41 splicing factor 3b, subunit 3, 130kD, putative [Plasmodium
falciparum 3D7]
Length = 1329
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 131/634 (20%), Positives = 264/634 (41%), Gaps = 82/634 (12%)
Query: 60 WGFHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEI 119
W H ++ F + L+ G L+ + ++ E+ + VKE + +
Sbjct: 322 WTMHRIKKFFFI-----------LIQSEYGDLYKIEVDHEDGI-----VKEIVCKYFDTV 365
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVS-------------------- 159
I ++ L +G +FV + G+ + + D+N ++
Sbjct: 366 PIGNSISVLKSGSLFVAAEFGNHYFYQFSGIGDDNKQFMCTSNHPLGKNAIIAFKTNKLK 425
Query: 160 ---VMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP 216
+++ +L+PI+DM ++D + Q+ T G SLRI+++G+ IEE A +LP
Sbjct: 426 NLYLVDQIYSLSPILDMKIIDAKNTHTPQIYTLCGRGPRSSLRILQHGLSIEELADNELP 485
Query: 217 GI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVD 275
G K IW + + D +V+SF G+T +L + G VEE ++ T + +
Sbjct: 486 GKPKYIWTIKKDNLSEYDGYIVVSFEGNTLILEI-GESVEEVSDTLLLNNVTTLHINILY 544
Query: 276 PRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHG 334
+ +QV + I+ + V W P K I S N +Q++ + +G ++ Y E+
Sbjct: 545 DNSFIQVYDTGIRHINGKV---VQEWVAPKNKQIKAASSNSSQIVISLSGGELIYFEIDE 601
Query: 335 SE-IKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS---L 390
S + ++ + L EV CL I ++ +A AVG ++ RLLS+
Sbjct: 602 SHTLVEIFRKNLNVEVLCLSI-----QQIPPNRVRANFLAVGCLDNV-VRLLSIEKDKYF 655
Query: 391 EEVCKEPLGGEIIPRSILMTCFEGH---------CYLLVALGDGSMFYFSLDPASGRLTD 441
+++ L P+ I ++ + +L + L G + +DP +G L++
Sbjct: 656 KQLSTHLLPNNSSPQDICISEMNDNGNTMKERNIIFLNIGLNTGVLLRSIIDPVAGTLSN 715
Query: 442 KKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAE 501
LG + + + ++ + Y K ++S +N + + S +
Sbjct: 716 HYSKYLGAKSIKICPVNVNKNPALLVLCEKTYLCYMHQGKFLYSPLNYDMLEYASSFYSP 775
Query: 502 SYPDS-LALATDS--TFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDI 558
D +A++++S F F + E+ +I + L PR+I F + +++
Sbjct: 776 QCSDGYVAISSNSLRIFRFYRLGEVFSQNI--LHLTFTPRKIVPLPFPSLFYDHDSSLEL 833
Query: 559 QEADGSTPVRPSASTQA------QNTTSSTISSLSYIKPGSTKQSTANQPADFNMEV--E 610
+ +R A +A +NT +L IK T++ N + N+ +
Sbjct: 834 ER---KKKIRMLAIIEADHNSYDENTQREIQKALKDIKLSDTERRKENDNENNNIYSNGD 890
Query: 611 VHNLLIIDQNTFERNFTSSTDLNLVVAKNNRIEI 644
V N+ + D F S+ +++L A+N++ ++
Sbjct: 891 VDNIDVNDSANMNEEFNSNDNISL--AQNHKKDV 922
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 1066 IFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNN 1124
++ YD KL + I+ Y C +NGKL+ASI + +R++ +K+L +C + +
Sbjct: 1041 VYTYDIQYKLNLLHITPIEEQPYCFCSYNGKLIASIGNKLRIYAL-GKKKLLKKCEYKDI 1099
Query: 1125 IIALF-LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
A+ +K+ G+ I D+ S+ + Y + + IS D P W+T EILD +
Sbjct: 1100 PEAIVSIKISGNRIFACDIRESVLIFFYDPNQNTLRLISDDIIPRWITCSEILDHHTIMA 1159
Query: 1184 AENSYNLFICQKDSAATSDE 1203
A+ ++FI + A DE
Sbjct: 1160 ADKFDSVFILRVPEEAKQDE 1179
>gi|302822731|ref|XP_002993022.1| hypothetical protein SELMODRAFT_136264 [Selaginella moellendorffii]
gi|300139222|gb|EFJ05968.1| hypothetical protein SELMODRAFT_136264 [Selaginella moellendorffii]
Length = 1277
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 200/484 (41%), Gaps = 68/484 (14%)
Query: 125 LTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQG 184
L + +G + +GD ++K+ E+G +S N+API+D +VD + Q
Sbjct: 387 LLWTSDGFMTAMIEMGDGHVLKV-----EDGQ-LSFQSFVQNIAPILDFSLVDYYGEKQD 440
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACID--LPGIKGIWALSIGSPKNLDNTLVLSFVG 242
Q+ C GG +EGS+RIIRNG +E+ C G+ GIW + ++SFV
Sbjct: 441 QMFACCGGDEEGSVRIIRNGNSVEKLICTPPVYQGVSGIWTMRYRFKDPYHAFFLISFVE 500
Query: 243 HTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR----- 297
TRVL++ V+ T+ GF S T CG V+ V QV L S A
Sbjct: 501 ETRVLSVGLNFVDITDAVGFESQVNTLACGLVEDGWVAQVWRYEVKLCSPTKAAHPAGVS 560
Query: 298 -----VSSWEPPNGKSISVVSCNKNQVLCATGCDVYYL-------EVHGSEIKQLAHRAL 345
++W P G ISV + +++V+ A L E+ +L +
Sbjct: 561 GSSPLSTTWRKP-GYPISVGAVCRSRVILALARPGLLLMLGTTQTSAESFELVELQLCMM 619
Query: 346 EYEVACLDISPLSNEETSSEPAKAQLAA---VGLWTDI-----------SARLLSLPSLE 391
E E++C+ I P + P A L A V D+ S LLS+ +
Sbjct: 620 EAEISCISI-PQGDISIPVPPTIAGLHAGNTVPAGVDLGNVCVVGTHKPSVELLSIVPGD 678
Query: 392 EVCKEPLG------------GEIIPRSILMTCFEGHCYLLVALGDGSMFYFSL------- 432
+ +G IP+ + + F+ Y+L L +G + +
Sbjct: 679 KFAPFAVGQVSLITSVGTAVSGCIPQDVRLALFD-RLYILAGLRNGMLLRYEWPEDTPSL 737
Query: 433 ---DPASGRLTDKKKVTLGTQPTVLKTFRSLS-TTNVFACSDRPTVIYSSNHKLVFSNVN 488
PA L ++ LG P L + + ++ A SDRP ++ + ++ +++++
Sbjct: 738 VLSKPAELHLIAARR--LGVSPVCLVPLEACALRADIIALSDRPWLLQMAK-RISYTSIS 794
Query: 489 LRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQT 548
+ H + ++ P + D + +++ + L+++ + LG RR+ Y S
Sbjct: 795 FQPSTHATPVCSKDCPKGIIFLADCSLHLVEMEQSRTLNVQKLRLGCTGRRVLYHPESGV 854
Query: 549 FGVI 552
V+
Sbjct: 855 LIVL 858
>gi|307109500|gb|EFN57738.1| hypothetical protein CHLNCDRAFT_56079 [Chlorella variabilis]
Length = 1144
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 169/399 (42%), Gaps = 63/399 (15%)
Query: 108 VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNR--SPDENGTYVS------ 159
VKE +++ I + + G +F S GD L + + DE G S
Sbjct: 286 VKELRIKYFDSIPPATSICLMRKGFLFAASEFGDHALYQFSSLGDDDEGGVESSSATLME 345
Query: 160 -------------------VMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
++ +LAPI+DM V +L + Q+ G +LR+
Sbjct: 346 TEEGYQPVFFDPRPLSNLEALDRMDSLAPILDMKVANLAGEEIPQIYAACGRGSRSTLRV 405
Query: 201 IRNGIGI------EEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAE 253
+R G+ + E A LPG +W + D +V+SF T VL++ G
Sbjct: 406 LRPGLAVTGKRAAHEMAVSPLPGNPTAVWTIKRSVGDEFDAYIVVSFSNATLVLSI-GET 464
Query: 254 VEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVS 313
VEE GF + T + ++LQV P+ L R++ W P K+I +
Sbjct: 465 VEEVNDSGFNGNVPTLQTQLLADDSMLQVYPNG--LRHIRPDRRINEWRAPGRKTIVKAT 522
Query: 314 CNKNQVLCA-TGCDVYYLEVH-GSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQL 371
N+ QV A G +V Y E++ + + R + +VACLD++P+ T +
Sbjct: 523 TNERQVAIALGGGEVIYFELNPQGMLVESEKREMGGDVACLDVAPVPEGRT-----RCAF 577
Query: 372 AAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPRSILM-------------TCFEGH 415
AVG++ D +AR+LSL +L+ + + +G P S+L+ G
Sbjct: 578 LAVGMY-DGAARVLSLQPDSTLKVLSTQAVGA--TPESVLLLDSPLMGKDGTEEGAGSGA 634
Query: 416 CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVL 454
+L V L +G + +D +G+L+D + LGT+P L
Sbjct: 635 LFLQVGLVNGVLLRTEVDRVTGQLSDTRTRFLGTKPPKL 673
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDP--NTYFVLGTAV---VHPEENEPKQGR 1063
I+D + + H ++ E ALS+ +F P T +GTA +P+E + G
Sbjct: 795 IVDPVSLQTTHCIEMEDNEAALSVCLVEFDSHPEHGTLLAVGTAQGLKFYPKECQ--NGF 852
Query: 1064 IIIFHY-DDGKLQQIAEK-EIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECS 1120
+ ++ + DDGK ++ K ++G +M F G+LL +++ +RL++ ++ LR E
Sbjct: 853 VHLYRFLDDGKRIELLHKTAVEGVPGAMAAFKGRLLVGVDAVLRLYDMGKKRMLRKCEYR 912
Query: 1121 HFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDEL 1180
IA L V G I VGD S ++YK + F + D P +T+ LD +
Sbjct: 913 RLPTRIAT-LHVSGSRIYVGDGQESTFFMRYKKGDNQFYIFADDIVPRHVTAALHLDYDT 971
Query: 1181 FLGAENSYNLFIC---QKDSAATSDE 1203
GA+ N+F+ Q+ SA D+
Sbjct: 972 LAGADRFGNVFVSRLPQEVSAQVEDD 997
>gi|121700262|ref|XP_001268396.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL
1]
gi|119396538|gb|EAW06970.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL
1]
Length = 1209
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 128/558 (22%), Positives = 221/558 (39%), Gaps = 58/558 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + ++ E +G T VK K++ + + L L +G ++V S
Sbjct: 306 FLLQTDDGDLFKVTIDMVEDDNGQLTGEVKRLKIKYFDTVPVASNLLILKSGFLYVASEG 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++ES +L P+ID
Sbjct: 366 GNHHFYQFEKLGDDDEEIEFSSESYSADPSVPCDPVFFRPRGAENLNLVESLNSLNPLID 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+ +L Q+ SG + R +++G+ + E +LP + +W +
Sbjct: 426 SKIANLNEDDAPQIYAVSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRGDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIILSFANGTLVLSI-GETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGIRHIL 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGSLAEYDERRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V CL + E ++ AVG D + R+LSL S++ + P
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656
Query: 401 EIIPRSILMTCFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
I+ S+ + G YL + L G LD +G L+D + LG +P L
Sbjct: 657 NIM--SMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSV 714
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTF 517
T V A S RP + Y F L V N +E + +
Sbjct: 715 RGQTAVLALSSRPWLGYCDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRI 774
Query: 518 GTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQ 576
+I+++ ++ ++PL PRR+ F VI + D +T R ++A+
Sbjct: 775 FSIEKLDNNMLQESIPLSYTPRRLLKHPEQPLFYVIGS--DNNVLSPATRARLIEDSKAR 832
Query: 577 NTTSSTISSLSYIKPGST 594
N + T+ + P +T
Sbjct: 833 NGEADTLPPEEFGYPRAT 850
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 9/212 (4%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N ++ +L E A+S+ + F +D T+ V+GTA V+P + I F
Sbjct: 864 NAKAVISTIELEENEAAVSMAAVPFSSQDDETFLVVGTAKDLTVNPPSSAGGFIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
D +L+ I + +++ ++ F G+L+A I S +R+++ ++ LR + +
Sbjct: 924 EDGKELEFIHKTKVEEPPLALLAFQGRLVAGIGSILRIYDLGMKQLLRKCQAPVVPKTIV 983
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK E D WMTS ++D E G +
Sbjct: 984 GLQTQGSRIIVSDVRESVTYVVYKYQENVLIPFVDDTVSRWMTSTTMVDYETVAGGDKFG 1043
Query: 1189 NLFI--CQKDSAATSDEDRT--HL-QEVGTVH 1215
NL++ C K + +DED + HL E G +H
Sbjct: 1044 NLWLVRCPKKISEEADEDGSGAHLIHERGYLH 1075
>gi|452820919|gb|EME27955.1| splicing factor 3B subunit 3 [Galdieria sulphuraria]
Length = 1294
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 133/549 (24%), Positives = 225/549 (40%), Gaps = 70/549 (12%)
Query: 82 YLLGDLAGRLFMLLLE----KEEKMDGTFSVKEPKVELLGEISIP-ECLTYLDNGVVFVG 136
YLL G LF L ++ +EE+ +KE ++ L + P + L NG +FV
Sbjct: 291 YLLCTELGDLFKLEMDCTTIEEEEEGSDIVMKEMRIRYLDSLPCPVNDMCILRNGFLFVA 350
Query: 137 SRLGDS---QLVKLNRSPD------ENGTYVSVMESFT---------------NLAPIID 172
S G+ Q L R D E+ + + F+ +LAP+
Sbjct: 351 SEYGNHGFYQFRSLGREQDFCCVGVEDSKWSNEPVYFSLHNNLENLLLIEEIESLAPLTC 410
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK-GIWALSIGSPKN 231
+ D +G Q+V SG GS + +R G E A +LPG G++ + +
Sbjct: 411 WQIGDFYGEGSPQIVVGSGRRHRGSWKTLRLGYRWTEMAVSELPGYPVGVFTVREQQQDS 470
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D+ +++SFV + VL++ G VEE GF++ T + +++QV I
Sbjct: 471 YDSYIIVSFVNASLVLSV-GETVEEVSDSGFSTFVSTIFVQLFSNNSIVQVHAQGIRHIR 529
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQ-VLCATGCDVYYLEVHGS-------EIKQLAHR 343
+ + V W+PP G I V N +Q V+ + Y E+ + E++ + +
Sbjct: 530 PDLQT-VHEWKPPKGLFIQVADGNASQLVIILNSKQLLYFELDETGMLTEIQEVELIQDQ 588
Query: 344 ALEYE--VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPL--- 398
+ E + C+ I+PL ++ KA AV RL SL +E C +P+
Sbjct: 589 SYESSSFLPCVSIAPLVAGQS-----KASFVAVSDGISYYTRLYSLK--KESCLKPISLQ 641
Query: 399 GGEIIPRSILMTCFEG----HCYLLVALGDGSMFYFS--LDPASGRLTDKKKVTLGTQPT 452
+ + S+L+ L++ +G S Y +DP +G L++++ +GTQP
Sbjct: 642 ALDTVANSVLLIGLSAPASSRSELVLLIGSHSGIYIRALVDPITGALSEQQSRLVGTQPV 701
Query: 453 VLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFS-NVNLRQV-NHMCSLNAESYPDSLALA 510
L+ S R ++Y NH L+ + + V +H+ +E PD +
Sbjct: 702 RLQRIEIQGKPVALVVSSRSYLVYLDNHLLLQTLPIGYDWVFDHVVGFCSEQCPDGVIAC 761
Query: 511 TDSTFTFGTIDEIQKL-------HIRTVPLGEAPRRIAYQE---SSQTFGVITTRIDIQE 560
S+ + +E + L H T P PRR+ +E SS RI E
Sbjct: 762 CGSSLCILSFEEDRDLFQTTHLFHSDTQPSLYTPRRLVDREDILSSSITNYTRNRILTLE 821
Query: 561 ADGSTPVRP 569
D + P
Sbjct: 822 CDQQIVISP 830
Score = 41.2 bits (95), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 1088 SMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKG--DFILVGDLMRS 1145
+M F G LL ++ +++R+++ +K+L + H ++ D I + D+ S
Sbjct: 1004 TMASFQGHLLVAVGTSLRMYD-LGKKQLLKKTQHPRATPHKITCIETCYDRIFLSDVQES 1062
Query: 1146 LTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNL-----------FICQ 1194
+ L +Y + F I+ DY P W T++ +LD + + N+ FI Q
Sbjct: 1063 VFLYRYSAADNLFLCIADDYLPKWCTTMCLLDYDTVAIGDKMGNISILRLPPEAGTFIEQ 1122
Query: 1195 KDSAATSDEDRTHLQEVGTVHLVGDGLVQC 1224
+ ++ H ++ + VG ++QC
Sbjct: 1123 DPTGGLLSKEAPHHFQLEACYYVG-SVIQC 1151
>gi|115390120|ref|XP_001212565.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
gi|114194961|gb|EAU36661.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
Length = 1217
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 122/556 (21%), Positives = 223/556 (40%), Gaps = 54/556 (9%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L ++ E +G T VK K++ + I L L +G ++V S
Sbjct: 306 FLLQTEDGDLFKLTIDMMEDDNGQLTGEVKRLKIKYFDTVPIASNLLILKSGFLYVASEA 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++++ +L P+ID
Sbjct: 366 GNHHFYQFEKLGDDDEEIEFSSEDFSADPSVPCEPVYFQPRGAENLNLVDTINSLNPLID 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
V +L + Q+ T SG + R +++G+ + E +LP + +W +
Sbjct: 426 SKVANLSEEDAPQIYTISGAGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTREDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++Q+ P I
Sbjct: 486 FDAYIILSFANGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLVQIHPRGIRHIM 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ G+ + R +
Sbjct: 545 VDR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V L + E ++ AVG D + R+LSL +LE + L
Sbjct: 603 VTSLSLG-----EVPEGRIRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTAAPSAL 656
Query: 406 SILMTCFEGH----CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
+I+ YL + L G LD +G L+D + LG++P L
Sbjct: 657 NIMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKG 716
Query: 462 TTNVFACSDRPTVIYS--SNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
T V A S RP + YS + + ++ + + ++E + + +
Sbjct: 717 QTAVLALSSRPWLGYSDIQTKGFMLTPLDYVPLEWGWNFSSEQCLEGMVGIQGQNLRIFS 776
Query: 520 IDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQNT 578
I+++ + +++PL PRR F VI + D ST R ++++N
Sbjct: 777 IEKLDNNMLQQSIPLSYTPRRFVKHPEQPLFYVIES--DNNVLSPSTRARLLEDSKSRNG 834
Query: 579 TSSTISSLSYIKPGST 594
++ + + P +T
Sbjct: 835 DTTVLPPEEFGYPRAT 850
Score = 66.6 bits (161), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 1017 ILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDG 1072
++H +L E A+S+ + F +D T+ V+GT V+P + I F D
Sbjct: 868 VVHTVELEDNEAAVSVAAVPFTSQDDETFLVVGTVKDMTVNPPSSAGGFIHIYRFQEDGR 927
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
+L+ I + +++ ++ F G+L + S +R+++ ++ LR +H + L+
Sbjct: 928 ELEFIHKTKVEEPPLALLAFQGRLAVGLGSLLRIYDLGMKQLLRKCQAHVVPKTIVGLQT 987
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI 1192
+G I+V D+ S+T + YK E D W TS ++D E G + NL++
Sbjct: 988 QGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSISRWTTSTTMVDYETVAGGDKFGNLWL 1047
Query: 1193 --CQKDSAATSDEDRT--HL-QEVGTVH 1215
C K + +DED + HL E G +H
Sbjct: 1048 VRCPKKVSEQADEDGSGAHLIHERGYLH 1075
>gi|400597418|gb|EJP65151.1| CPSF A subunit region [Beauveria bassiana ARSEF 2860]
Length = 1212
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 125/546 (22%), Positives = 220/546 (40%), Gaps = 66/546 (12%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E +G T V+ K++ +
Sbjct: 297 MHKLKG--SAGAFF------FLLQTDDGDLFKITIDMVEDEEGAPTGEVQRMKIKYFDTV 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN---------------GTY------- 157
+ L L +G ++V S+ G+ + + D++ Y
Sbjct: 349 PVATSLCILKSGFLYVASQFGNYAFYQFEKLGDDDDELEFSSDDFPVDPLAAYEPVYFYP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+++++S + P++D V +L + Q+ + G + R I++G+ + E
Sbjct: 409 RPAENLALVDSIPAMNPLLDCKVANLTGEDAPQIYSICGNGARSTFRTIKHGLEVNEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPG+ +W L + S + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGVPSAVWTLKLNSDEQYDTYIVLSFTNGTLVLSI-GETVEEVSDSGFLTSVPTIAA 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYL 330
+ ++QV P I V+ W P +SI S N +QV A + ++ Y
Sbjct: 528 QLLGTDGLIQVHPRG---IRHIRNGNVNEWSAPQHRSIVAASTNAHQVAIALSSGEIVYF 584
Query: 331 EVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--- 387
E+ LA + E+ ++ LS E ++ AVG D + R+LSL
Sbjct: 585 EMDSD--GSLAEYDEKKEMFGT-VTALSLGEVPEGRVRSSFLAVGC-DDATVRILSLDPE 640
Query: 388 -----PSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDK 442
S++ + P IIP + YL + L G LD +G L+D
Sbjct: 641 STLENKSVQALTAAPTSLAIIPMDD-SSSGGSTLYLHIGLHSGVYLRTVLDEITGDLSDT 699
Query: 443 KKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCSLNA 500
++ LG +P L T V S RP + Y+ + + +N + + ++
Sbjct: 700 RQKFLGPKPVRLFQVSVGGRTCVLGLSSRPWLGYADPITNSFEITPLNYVDLEWGWNFSS 759
Query: 501 ESYPDSLALATDSTFTFGTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITTRIDIQ 559
E D + + +ID + + I+ ++PL P++ S F I
Sbjct: 760 EQCEDGVVGIQGQSLRIFSIDRLGETLIQSSIPLTYTPKKFVKHPSEPLFYTI------- 812
Query: 560 EADGST 565
EAD T
Sbjct: 813 EADNHT 818
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 1027 EYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDG--KLQQIAEK 1080
E A+S F +D ++ V+GT +++P + + I I+ + +G +L+ I +
Sbjct: 881 EAAVSAAVVSFASQDNESFLVVGTGKDMILNPRSS--SEAYIYIYRFQEGGRELEFIHKT 938
Query: 1081 EIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVG 1140
+I+ ++ F GKLLA I T+R+++ + LR + + L +G I+VG
Sbjct: 939 KIEEPAMALLAFQGKLLAGIGKTLRMYDLGMRQLLRKAQAEVVPQQIVSLNTQGSRIVVG 998
Query: 1141 DLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAAT 1200
D+ + +TL+ YK + D W T ++D E G + N+FI + + A+
Sbjct: 999 DVQQGVTLVVYKPASNKLIPFADDTIARWTTCTTMVDYESVAGGDKFGNMFIVRSPAKAS 1058
Query: 1201 SDEDRTHLQEVGTVHLV 1217
+ D +E +HLV
Sbjct: 1059 EEAD----EEQAGLHLV 1071
>gi|237837399|ref|XP_002367997.1| splicing factor 3B subunit 3, putative [Toxoplasma gondii ME49]
gi|211965661|gb|EEB00857.1| splicing factor 3B subunit 3, putative [Toxoplasma gondii ME49]
gi|221488748|gb|EEE26962.1| splicing factor 3B subunit, putative [Toxoplasma gondii GT1]
gi|221509241|gb|EEE34810.1| splicing factor 3B subunit, putative [Toxoplasma gondii VEG]
Length = 1233
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 179/425 (42%), Gaps = 34/425 (8%)
Query: 139 LGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSL 198
LG ++ P N +++++ +L+PI D+ V+D + G Q+ G +L
Sbjct: 377 LGREAIIAFKPRPLRN---LALVDELQSLSPITDLKVLDAQGTGAPQVYVLCGKGPRSTL 433
Query: 199 RIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEET 257
RI+++G+G+EE A +LPG + +W + D + ++F G + VL + G VEE
Sbjct: 434 RILQHGLGVEEMADNELPGRARAVWTTKLSHQNAFDGYIFVAFDGSSLVLQI-GDTVEEV 492
Query: 258 EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKN 317
F ++ + + + +QV + I +SK RV+ W P G+ I + N+
Sbjct: 493 TDSAFLTNVSSLLVALMYDDSFIQVHETGIRHI-LKSK-RVNEWRAPGGRRIKAAAANER 550
Query: 318 Q-VLCATGCDVYYLEVHGSE-IKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVG 375
Q V+ G ++ EV + + + A R + E C+ + + +A AVG
Sbjct: 551 QLVISLAGGELVLFEVDDAHTLVETARRNINVESTCMSMQAIPKGRL-----RASFLAVG 605
Query: 376 LWTDISARLLSLP---SLEEVCKEPLGGEIIPRSILMTCF---------------EGHCY 417
D R+LSL +L ++ + L + P S+ + G Y
Sbjct: 606 -GLDNMVRILSLEKDRNLRQLSTQLLPNDATPESVCLATLTGLGANSTDAGKSQDNGVLY 664
Query: 418 LLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYS 477
L V L G M +DP G L D++ LG + + A S++ + Y+
Sbjct: 665 LHVGLNTGVMIRSVVDPVLGTLLDQRSRFLGGRAVRFHAVTLQGQPAILALSEKSWLCYT 724
Query: 478 SNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTFGTIDEIQKLHIRTVPLGEA 536
HKL +N + + S +E D +A+A S F + +PL
Sbjct: 725 FQHKLHCIPLNYDPLECVASFCSEQCTDGFVAIAGGSLRIFRCQRLGETFGQTVLPLSFT 784
Query: 537 PRRIA 541
PR +A
Sbjct: 785 PRAMA 789
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 8/169 (4%)
Query: 1058 EPKQ---GRIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK 1113
+PK+ I +F YDD L + ++ ++ F G LLA + +RL+ ++
Sbjct: 934 KPKKVPHASIKVFSYDDKFSLSLVHSTPVEDYPMALTAFRGMLLAGVGHKLRLYALGRKR 993
Query: 1114 ELRLECSHFNNIIAL-FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTS 1172
L+ +C + N + F++V GD + VGD+ S+ +++Y+ E F ++ D P W+T
Sbjct: 994 LLK-KCEYKNLPCGVAFIRVAGDRLFVGDVRESVHVMRYRLSENLFYVLADDVVPRWLTK 1052
Query: 1173 IEILDDELFLGAENSYNLFICQKDSAATSDE--DRTHLQEVGTVHLVGD 1219
E+LD F+ A+ ++FIC+ S A DE D T L+ G + D
Sbjct: 1053 GEVLDYHTFVAADKFDSVFICRVPSEAKEDELGDTTGLRLRGDTTYLTD 1101
>gi|302807210|ref|XP_002985318.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
gi|300147146|gb|EFJ13812.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
Length = 1207
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/496 (20%), Positives = 202/496 (40%), Gaps = 55/496 (11%)
Query: 103 DGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVK---LNRSPDENGTYVS 159
D V E K++ + + L +G +F S G+ L + + PD + +
Sbjct: 314 DTDMVVTELKIKYFDTFPVTSAMCVLKSGFLFAASEFGNHALYQFQGIGDDPDVESSSAT 373
Query: 160 VMES----------------------FTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGS 197
+ E+ +L PI+DM + +L + Q+ G +
Sbjct: 374 LEETEDGFKPIFFQPRKLKNLIQIDEGESLMPIMDMKIANLFEEETPQIFVACGRGPRST 433
Query: 198 LRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEE 256
LRI+R G+ + E A LPG+ +W + D +V+SF+ T VL++ G VEE
Sbjct: 434 LRILRPGLAVSEMAVSQLPGVPSAVWTVKKSVTDEFDAYIVVSFLNATLVLSI-GETVEE 492
Query: 257 TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNK 316
GF + + +++QV P+ I S R++ W+ P K+I V N+
Sbjct: 493 VSDSGFLDTTPSLQVSLLGDDSLMQVYPNGIRHI--RSLVRINEWKTPGKKTIVKVGSNR 550
Query: 317 NQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAV 374
QV+ +G ++ Y E+ + ++ ++ R + +VACL I P+ +++ AV
Sbjct: 551 MQVVIGLSGGELIYFEMDPTGQLMEIEKREMSGDVACLAIGPVPEGRQ-----RSRFLAV 605
Query: 375 GLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILM------------TCFEGHCYLL 419
G + D + R+LSL + C L +++ P S+L+ + +L
Sbjct: 606 GSY-DNTIRILSLDPND--CMHILSVQMVASPPESLLLLEVQASTGGEDGAVYPASVFLN 662
Query: 420 VALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
L +G + +D +G+L+ + LG + L + S RP + Y
Sbjct: 663 AGLQNGVLLRTEVDMVTGQLSGTRTRFLGLRAPKLFATSVRGRQALLCLSSRPWLGYIHQ 722
Query: 480 HKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPR 538
+ + ++ + + S +++ + + TI+ + + + ++ L PR
Sbjct: 723 GHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGEALRVFTIERLGETFNQTSIQLRYTPR 782
Query: 539 RIAYQESSQTFGVITT 554
+ + +I T
Sbjct: 783 KFILHPKRKFLVLIET 798
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 8/175 (4%)
Query: 1027 EYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ----GRIIIFHY-DDGK-LQQIAEK 1080
E A S+ F ++ N VL E PK+ G I I+ + +DG+ L+ + +
Sbjct: 875 EAAFSICCVNFHDNKNLGTVLAVGTAKDLEWWPKRRSMGGFIHIYRFVEDGRSLELVHKT 934
Query: 1081 EIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILV 1139
I G ++C+F G+LLA I +R+++ K LR E +F N I + GD I V
Sbjct: 935 PIDGVPTALCQFQGRLLAGIGQILRIYDLGKRKLLRKCENKNFPNTITS-IHSYGDRIYV 993
Query: 1140 GDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ 1194
GD+ S ++Y+ E + D +P W+T+ +D + + NLF +
Sbjct: 994 GDIQESFHYVKYRRDENQLYAFADDSSPRWLTASLHIDFDTMAAGDKFGNLFFVR 1048
>gi|358366518|dbj|GAA83139.1| nuclear mRNA splicing factor [Aspergillus kawachii IFO 4308]
Length = 1209
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 119/514 (23%), Positives = 202/514 (39%), Gaps = 52/514 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+L+ G LF L ++ E +G T VK K++ + + L L +G ++V S
Sbjct: 306 FLIQTEDGDLFKLTIDMVEDDNGQLTGEVKRLKIKYFDTVPLASSLLILKSGFLYVASEA 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++E+ +L P+ID
Sbjct: 366 GNHHFYQFEKLGDDDEEIEFTSEAFSADPSVPCDPIYFRPRGAENLNLVETINSLNPLID 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
VV++ Q+ T SG S R +++G+ + E +LP + +W +
Sbjct: 426 SKVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRSDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++Q+ P I
Sbjct: 486 FDAYIILSFANGTLVLSI-GETVEEVTDTGFLSTAPTLAVQQLGEDSLIQIHPRGIRHIL 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDSDGSLAEYDERRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E ++ AVG D + R+LSL +LE + L
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTAAPSAL 656
Query: 406 SILMTCFEGH----CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
+I+ YL + L G LD +G L+D + LG++ L
Sbjct: 657 NIMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKAVKLFQVSVKG 716
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTFGT 519
T V S RP + YS F L V N +E + + +
Sbjct: 717 QTAVLGLSSRPWLGYSDVQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFS 776
Query: 520 IDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
I+++ + +++PL PRR F VI
Sbjct: 777 IEKLDNNMLQQSIPLSYTPRRFLKHPEQPLFYVI 810
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 96/194 (49%), Gaps = 6/194 (3%)
Query: 1017 ILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDG 1072
++H +L E A+S+ + F +D T+ V+GTA V+P ++ I F D
Sbjct: 868 VVHTIELEENEAAISIAAVPFTSQDDETFLVVGTAKDMSVNPPKSAGGYIHIYRFQEDGR 927
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
+L+ I + +++ ++ F G+L+A I S +R+++ ++ LR + + L+
Sbjct: 928 ELEFIHKTKVEEPPLALLGFQGRLVAGIGSLLRIYDLGMKQLLRKCQAPVVPKTIVGLQT 987
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI 1192
+G I+V D+ S+T + YK E D W T+ ++D E G + NL++
Sbjct: 988 QGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDKFGNLWL 1047
Query: 1193 --CQKDSAATSDED 1204
C K ++ +DED
Sbjct: 1048 LRCPKKTSEEADED 1061
>gi|389586447|dbj|GAB69176.1| splicing factor 3B subunit 3 [Plasmodium cynomolgi strain B]
Length = 1286
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 108/495 (21%), Positives = 208/495 (42%), Gaps = 61/495 (12%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G L+ + ++ E+ + VKE + + + + + +G +FV + G+ + +
Sbjct: 308 GDLYKIEMDHEDGI-----VKEITCKYFDTVPVANAICVMKSGSLFVAAEFGNHFFYQFS 362
Query: 149 RSPDENG-----------------------TYVSVMESFTNLAPIIDMVVVDLERQGQGQ 185
D++ T + +++ +L+PI+DM ++D + Q
Sbjct: 363 GIGDDDNEAMCTSKHPSGRNAIIAFRTKKLTNLFLIDQVYSLSPILDMKILDAKNANSPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHT 244
+ G SLRI+++G+ IEE A +LPG K IW + + + D +++SF G T
Sbjct: 423 IYALCGRGPRSSLRILQHGLSIEELADNELPGRPKFIWTIKKDNASDYDGYIIVSFEGST 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
+L + G VEE ++ T + + T++QV + I+ + V W PP
Sbjct: 483 LILEI-GETVEEVVDSLLLTNVTTIHVNILYDNTLIQVHDTGIRHINGKV---VHEWVPP 538
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSE-IKQLAHRALEYEVACLDISPLSNEET 362
K I + N Q++ + +G ++ Y E+ S + ++ + L E CL I ++
Sbjct: 539 KNKQIKAATSNSTQIVISLSGGELIYFEIDESHTLVEIFRKNLNVETLCLSI-----QQV 593
Query: 363 SSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPR--SILMTCFEGHC---- 416
+A AVG ++ RLLS+ +E L I+P S C C
Sbjct: 594 EENKLRANFLAVGCLDNV-VRLLSIE--KEKYFNQLSTFILPNNSSAQDICISQMCELGN 650
Query: 417 -------YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACS 469
+L + L +G + +DP +G LT+ LG + + + +
Sbjct: 651 DKERKLIFLNIGLNNGVLLRSVVDPITGTLTNHYSKYLGAKNVKICPVHLKKNSALLVLC 710
Query: 470 DRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST---FTFGTIDEIQKL 526
++ + Y K ++S +N + + S ++E D + S+ F F + E+
Sbjct: 711 EKTYLCYVHQGKYIYSPLNYDILEYASSFHSEQCSDGYVAISGSSLRIFRFYRLGEVFSQ 770
Query: 527 HIRTVPLGEAPRRIA 541
+I + L PR+I
Sbjct: 771 NI--LHLTFTPRKIV 783
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 1066 IFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNN 1124
++ YD + KL + ++ + C FNG+LLASI + +R++ +K+L +C + +
Sbjct: 998 VYTYDINYKLNLLHITPVEDQPFCFCPFNGRLLASIGNKLRIYAL-GKKKLLKKCEYKDI 1056
Query: 1125 IIALF-LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
A+ +KV GD I D+ S+ + Y + + IS D P W+T EILD +
Sbjct: 1057 PEAIISIKVSGDRIFASDIRESVLIFFYDSNMNTLRLISDDIIPRWITCSEILDHHTIMA 1116
Query: 1184 AENSYNLFICQKDSAATSDE 1203
A+ ++F+ + A +E
Sbjct: 1117 ADKFDSVFVLRVPEEAKQEE 1136
>gi|302773427|ref|XP_002970131.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
gi|300162642|gb|EFJ29255.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
Length = 1207
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/496 (20%), Positives = 202/496 (40%), Gaps = 55/496 (11%)
Query: 103 DGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVK---LNRSPDENGTYVS 159
D V E K++ + + L +G +F S G+ L + + PD + +
Sbjct: 314 DTDMVVTELKIKYFDTFPVTSAMCVLKSGFLFAASEFGNHALYQFQGIGDDPDVESSSAT 373
Query: 160 VMES----------------------FTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGS 197
+ E+ +L PI+DM + +L + Q+ G +
Sbjct: 374 LEETEDGFKPIFFQPRKLKNLIQIDEGESLMPIMDMKIANLFEEETPQIFVACGRGPRST 433
Query: 198 LRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEE 256
LRI+R G+ + E A LPG+ +W + D +V+SF+ T VL++ G VEE
Sbjct: 434 LRILRPGLAVSEMAVSQLPGVPSAVWTVKKSVTDEFDAYIVVSFLNATLVLSI-GETVEE 492
Query: 257 TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNK 316
GF + + +++QV P+ I S R++ W+ P K+I V N+
Sbjct: 493 VSDSGFLDTTPSLQVSLLGDDSLMQVYPNGIRHI--RSLVRINEWKTPGKKTIVKVGSNR 550
Query: 317 NQVLCA-TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAV 374
QV+ +G ++ Y E+ + ++ ++ R + +VACL I P+ +++ AV
Sbjct: 551 MQVVIGLSGGELIYFEMDPTGQLMEIEKREMSGDVACLAIGPVPEGRQ-----RSRFLAV 605
Query: 375 GLWTDISARLLSLPSLEEVCKEPLGGEII---PRSILM------------TCFEGHCYLL 419
G + D + R+LSL + C L +++ P S+L+ + +L
Sbjct: 606 GSY-DNTIRILSLDPND--CMHILSVQMVASPPESLLLLEVQASTGGEDGAVYPASVFLN 662
Query: 420 VALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
L +G + +D +G+L+ + LG + L + S RP + Y
Sbjct: 663 AGLQNGVLLRTEVDMVTGQLSGTRTRFLGLRAPKLFATSVRGRQALLCLSSRPWLGYIHQ 722
Query: 480 HKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPR 538
+ + ++ + + S +++ + + TI+ + + + ++ L PR
Sbjct: 723 GHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGEALRVFTIERLGETFNQTSIQLRYTPR 782
Query: 539 RIAYQESSQTFGVITT 554
+ + +I T
Sbjct: 783 KFILHPKRKFLVLIET 798
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 8/175 (4%)
Query: 1027 EYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ----GRIIIFHY-DDGK-LQQIAEK 1080
E A S+ F ++ N VL E PK+ G I I+ + +DG+ L+ + +
Sbjct: 875 EAAFSICCVNFHDNKNLGTVLAVGTAKDLEWWPKRRSMGGFIHIYRFVEDGRSLELVHKT 934
Query: 1081 EIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILV 1139
I G ++C+F G+LLA I +R+++ K LR E +F N I + GD I V
Sbjct: 935 PIDGVPTALCQFQGRLLAGIGQILRIYDLGKRKLLRKCENKNFPNTITS-IHSYGDRIYV 993
Query: 1140 GDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ 1194
GD+ S ++Y+ E + D +P W+T+ +D + + NLF +
Sbjct: 994 GDIQESFHYVKYRRDENQLYAFADDSSPRWLTASLHIDFDTMAAGDKFGNLFFVR 1048
>gi|295666353|ref|XP_002793727.1| pre-mRNA-splicing factor rse1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278021|gb|EEH33587.1| pre-mRNA-splicing factor rse1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1209
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 177/444 (39%), Gaps = 51/444 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + ++ E +G T V+ K++ + I L L +G +FV S
Sbjct: 306 FLLQTEDGDLFKVTIDMVEDDNGQITGEVRRLKLKYFDTVPIASSLCILKSGFLFVASET 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ V ++ES +L P++D
Sbjct: 366 GNHHFYQFEKLGDDDDEIEFTSDSFSANPSEPLPPVYFHPRLSENVHLVESVNSLNPLMD 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+ +L Q+ T G S R +++G+ + E +LP + +W +
Sbjct: 426 CKITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVESELPSVPSAVWTSKLTREDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIILSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V CL + E A++ AVG D + R+LSL S++ + P
Sbjct: 603 VTCLSLG-----EVPKGRARSSFLAVGC-DDSTVRILSLDPDSTLGNKSVQALTSAPSAL 656
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
I+ + T YL + L G LD +G L+D + LG +P L
Sbjct: 657 SIMAMAD-STSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVK 715
Query: 461 STTNVFACSDRPTVIYSSNHKLVF 484
V A S RP + YS F
Sbjct: 716 EQKAVLALSSRPWLGYSDLQTKAF 739
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N+ ++ +L E A+S+ + F +D T+ V+GT VV+P I F
Sbjct: 864 NSKSVVSQIELEENEAAVSVAAVSFSSQDDETFLVVGTGKDMVVNPRSCSAGFIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
D +L+ I + +++ ++ F G+LLA I + VR+++ + LR + + +
Sbjct: 924 EDGKELEFIHKTKVEQPPVALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASVVPHLVV 983
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK+ E D W T ++D E G +
Sbjct: 984 GLQTQGSRIIVSDVQESVTYVVYKSQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFG 1043
Query: 1189 NLFI--CQKDSAATSDED 1204
NL++ C ++ +DED
Sbjct: 1044 NLWLLRCPAKASEEADED 1061
>gi|326483043|gb|EGE07053.1| pre-mRNA-splicing factor rse1 [Trichophyton equinum CBS 127.97]
Length = 1209
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 184/461 (39%), Gaps = 49/461 (10%)
Query: 82 YLLGDLAGRLFMLLLE--KEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + +E ++E T VK K++ + + L L +G +FV S
Sbjct: 306 FLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLFVASET 365
Query: 140 GDS---QLVKLNRSPDE----NGTYVSVM--------------------ESFTNLAPIID 172
G+ Q KL DE + Y +V+ ES +L P++
Sbjct: 366 GNQHFYQFEKLGDDDDEIEFISDDYSAVISEPLPPVYFRPRPAENLNLVESIASLNPLMA 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+ ++ + Q+ T G S R +++G+ + E +LP + +W +
Sbjct: 426 ASITNITEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLSRNDQ 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D +VLSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIVLSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADQ--RVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E ++ AVG D + R+LSL +LE + L
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656
Query: 406 SILM----TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ T YL + L G LD +G L+D + LG +P L +
Sbjct: 657 SIMSMIDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKE 716
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAES 502
V A S R + YS F+ L V S N S
Sbjct: 717 QRAVLALSSRSWLGYSDVQTKSFTLTPLNYVGLEWSWNFSS 757
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
+T +L +L E A+S+ + F ++ T+ V+GT VV P I F
Sbjct: 864 HTKSVLSNLELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSPRTFTCGFIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
+ +L+ I + +++ ++ F G+LLA I +R+++ + LR + + +
Sbjct: 924 EEGKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIV 983
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK E + + D P W T ++D E G +
Sbjct: 984 GLQTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAGGDKFG 1043
Query: 1189 NLFI--CQKDSAATSDED 1204
N+++ C ++ +DED
Sbjct: 1044 NIWLLRCPTKASEEADED 1061
>gi|254572247|ref|XP_002493233.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
gi|238033031|emb|CAY71054.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
gi|328352752|emb|CCA39150.1| Pre-mRNA-splicing factor rse1 [Komagataella pastoris CBS 7435]
Length = 1179
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 207/502 (41%), Gaps = 53/502 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKE-PKVELLGEISIPECLTY--LDNGVVFVGSR 138
+LL G +F + + +E D T+ KE +E+ S+P CL +G +F +
Sbjct: 293 FLLQSDLGDIFKVSVTYQEVQDDTYDTKEVSSIEIKYFDSLPVCLDLHIFKSGFLFADTE 352
Query: 139 LGDSQLVKLNR--------------SPDENGTY--------------VSVMESFTNLAPI 170
GD L + + PDE Y +S++ L PI
Sbjct: 353 TGDKYLYQFEKLGDDDDGTIWSSENYPDEESVYEDHHIYFDTKELDNLSLVYILDCLNPI 412
Query: 171 IDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK-GIWALSIGSP 229
D L Q + QLV SGG SL+++++ + I E A +LPG I+ +
Sbjct: 413 TD----GLLDQEKSQLVLTSGGSSRSSLKLLKHELAINELASSELPGSALNIFTTKVSHK 468
Query: 230 KNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAIL 289
D +V+SF+ T VL++ G V+E G T V ++ QV +
Sbjct: 469 DQYDKYMVISFIDGTLVLSI-GESVDEVSDSGLELQVSTIAVQQVGRNSLAQVHSHGIVH 527
Query: 290 IS--TESKARVSSWEPPNGKSISVVSCNKNQV-LCATGCDVYYLEVHGSEIKQLAHRALE 346
+ E S W+PP G I V S +Q+ L + ++ Y E+ E QL
Sbjct: 528 LKGLNEPSFEKSLWQPPVGAEILVASMTNSQIALGLSNRELVYFEI--DEYDQLIEHKER 585
Query: 347 YEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEII 403
E++ IS LS + ++ AVG D++ ++LS LE + + L I
Sbjct: 586 KEMSG-RISALSLGQIPDGRLRSPFLAVG-CNDMTIKILSTDPNSCLEVLSLQALSS--I 641
Query: 404 PRSILMTCFEGHCYLLVALGDGSMFYFS--LDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
P + +T E V +G S Y L+ SG+L+D + LG + L +
Sbjct: 642 PSDLQITNLEQGAGYFVHIGLDSGIYIRTLLNRISGQLSDTRVNYLGPKRVSLSPVKIFG 701
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDS-TFTFGTI 520
V A SD + Y+S + + + + C +E P++ + + T TI
Sbjct: 702 KNLVLAFSDTSYLSYNSGFDAKITPLCDGKFTYGCGFISEECPENGVVGVSAENLTIFTI 761
Query: 521 DEIQ-KLHIRTVPLGEAPRRIA 541
D++ ++++ +PL PRRI
Sbjct: 762 DQLDTDMNVKDIPLTFTPRRIT 783
>gi|392580116|gb|EIW73243.1| hypothetical protein TREMEDRAFT_37240 [Tremella mesenterica DSM
1558]
Length = 1214
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 123/513 (23%), Positives = 205/513 (39%), Gaps = 53/513 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL + G L+ L ++ + + V K++ + + L L +G +F S GD
Sbjct: 309 FLLQNEDGDLYKLWIDHQGE-----DVVAVKIKYFDTVPVSNSLCILKSGYLFAASEFGD 363
Query: 142 SQLVKLNR--------------SPDENGTYVSVMESFTN---------------LAPIID 172
L + PD T ++ +F N L PI+D
Sbjct: 364 QNLYQFQNLAEDDDEQEWSSTDYPDNGNTTGALPYAFFNPRPLQNLLLVDTLSSLDPILD 423
Query: 173 MVVVDLERQGQG--QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSP 229
VV+L Q Q+ G + R +++G+ I++ LPG+ +W L +
Sbjct: 424 AQVVNLLGQSSDTPQIYAACGRGPRSTFRTLKHGLEIQQIVASPLPGVPNAVWTLKLTEE 483
Query: 230 KNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAIL 289
D+ +VLSF T VL++ G +EE GF S T + +LQV P L
Sbjct: 484 DEFDSYIVLSFPNGTLVLSI-GETIEEVNDTGFLSSGPTLAVQQLGDAGLLQVHPYG--L 540
Query: 290 ISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALE 346
+ RV W P G +I+ + NK QV+ A T VY+ L+ GS + ++L
Sbjct: 541 RHIRAADRVDEWACPPGSAITAATTNKRQVVIALSTAELVYFELDPEGSLSEYQDKKSLP 600
Query: 347 YEVACLDISPLSNEETSSEPAKA------QLAAVGLWTDISARLLSLPSLEEVCKEPLGG 400
C+ I+ + E P A + + L + + LSL +L
Sbjct: 601 GNATCVSIAEVP-EGRRRTPFLAVGCDNQTVHVISLEPESTLTTLSLQALTAPPASICLA 659
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
EI SI +L + L +G + +DP G L+D + LG +P L
Sbjct: 660 EIFDTSIDKN--RATMFLNIGLMNGVLLRTVVDPVEGSLSDTRLRFLGAKPPKLVRSSIH 717
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTI 520
+ +V A S R ++Y+ L + + + +L+A P+ L + +T TI
Sbjct: 718 GSPSVMAFSSRAWLLYTYQDMLQTQPLIYDALEYASTLSAAMCPEGLIGISGNTLRIFTI 777
Query: 521 DEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
+ +KL ++ L PR+ S F +I
Sbjct: 778 PRLGEKLKQDSMSLTYTPRKFISHPFSTIFYMI 810
>gi|327309050|ref|XP_003239216.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
gi|326459472|gb|EGD84925.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
Length = 1209
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 183/461 (39%), Gaps = 49/461 (10%)
Query: 82 YLLGDLAGRLFMLLLE--KEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + +E ++E T VK K++ + + L L +G +FV S
Sbjct: 306 FLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLFVASET 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++ES +L P++
Sbjct: 366 GNQHFYQFEKLGDDDDEIEFISDDYSAIISEPLPPVYFRPRPAENLNLVESIASLNPLMA 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+ ++ + Q+ T G S R +++G+ + E +LP + +W +
Sbjct: 426 ASIANITEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLSRNDQ 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D +VLSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIVLSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADQ--RVNEWPAPQHRSIVAATSNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E ++ AVG D + R+LSL +LE + L
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656
Query: 406 SILM----TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ T YL + L G LD +G L+D + LG +P L +
Sbjct: 657 SIMSMIDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKE 716
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAES 502
V A S R + YS F+ L V S N S
Sbjct: 717 QRAVLALSSRSWLGYSDVQTKSFTLTPLNYVGLEWSWNFSS 757
Score = 66.6 bits (161), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
+T +L + +L E A+S+ + F ++ T+ V+GT VV P I F
Sbjct: 864 HTKSVLSSLELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSPRTFTCGFIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
+ +L+ I + +++ ++ F G+LLA I +R+++ + LR + + +
Sbjct: 924 EEGKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIV 983
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK E + + D P W T ++D E G +
Sbjct: 984 GLQTQGSRIIVSDVQESVTYVVYKYQENALISFADDIIPRWTTCTTMVDYETVAGGDKFG 1043
Query: 1189 NLFI--CQKDSAATSDED 1204
N+++ C ++ +DED
Sbjct: 1044 NIWLLRCPTKASEEADED 1061
>gi|255946770|ref|XP_002564152.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591169|emb|CAP97395.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1209
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 133/558 (23%), Positives = 219/558 (39%), Gaps = 58/558 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L LE E G T VK ++ I + L L +G ++ S
Sbjct: 306 FLLQTEDGDLFKLNLEMVEDKQGKPTGEVKRLTIKYFDTIPVSTNLLILKSGFLYAASES 365
Query: 140 GDS---QLVKLNRSPDE------------------------NGTYVSVMESFTNLAPIID 172
G+ Q KL P E V++MES +L+P+ID
Sbjct: 366 GNHNFYQFEKLGDDPSEAFFSSDSFSADPSVPLTPIYFHPRGAENVNLMESMNSLSPLID 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+++L Q+ T G + R +++G+ + E DL + +W +
Sbjct: 426 SKILNLSEDDAPQIYTICGSGARSTFRTLKHGLEVSEIVESDLQQVPSAVWTTKLTRGDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FHTYIILSFANGTLVLSI-GEIVEEVSDTGFLSSAPTLAVQQLGEDSLVQVHPRGIRHIL 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ G+ + R +
Sbjct: 545 ADQ--RVNEWPAPQHRSIVAAAANERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V L + E ++ AVG D + R+LSL S++ + P
Sbjct: 603 VTSLSMG-----EVPEGRMRSSFLAVGC-DDSTVRILSLNPDSTLENKSVQALTSAPSAL 656
Query: 401 EIIPRSILMTCFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
+I+ ++ + G YL + L G LD +G L+D + +G +P L
Sbjct: 657 QIM--AMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFIGAKPVKLSQVSV 714
Query: 460 LSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTF 517
T V A S RP + YS F L V N +E + + +
Sbjct: 715 KGQTAVLALSTRPWLGYSDVQTKSFMLTPLDYVGLEWGWNFSSEQCVEGMIGIQGRSLRI 774
Query: 518 GTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQ 576
T++++ ++ ++PL PRR F VI + D +T R +QAQ
Sbjct: 775 FTVEKLDNNMLQESIPLSYTPRRFVKHPEQPLFYVIES--DNNVLSPATRQRLIDDSQAQ 832
Query: 577 NTTSSTISSLSYIKPGST 594
N ++ + + P +T
Sbjct: 833 NGEATDLPPADFGYPRAT 850
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 1027 EYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082
E A+SL + F +D T+ V+GTA V P + I F D +L+ I + ++
Sbjct: 878 EAAVSLAAVSFSSQDDETFLVVGTAKDMTVSPPSSSCGFIHIYRFQEDGRELEFIHKTQV 937
Query: 1083 KGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDL 1142
++ F G+LLA I +R+++ ++ LR + + L+ +G I+V D+
Sbjct: 938 DEPPLALLGFQGRLLAGIGPILRVYDLGMKQLLRKCQAPVVPKTIVGLQTQGSRIIVSDV 997
Query: 1143 MRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAAT 1200
S+T + YK + + D W +S ++D E G + NL++ C +
Sbjct: 998 RESVTYVVYKYQDNVLIPFADDSIARWTSSTTMVDYETTAGGDKFGNLWLVRCPSKVSEQ 1057
Query: 1201 SDEDRT--HL-QEVGTVH 1215
+DED + HL E G +H
Sbjct: 1058 ADEDGSGAHLIHEKGYLH 1075
>gi|242772631|ref|XP_002478075.1| nuclear mRNA splicing factor, putative [Talaromyces stipitatus ATCC
10500]
gi|218721694|gb|EED21112.1| nuclear mRNA splicing factor, putative [Talaromyces stipitatus ATCC
10500]
Length = 1209
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 177/437 (40%), Gaps = 51/437 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L ++ E +G T VK K++ + I L L +G +FV S
Sbjct: 306 FLLQTEDGDLFKLTIDMVEDDNGQLTGEVKRLKIKYFDTVPIATNLLILKSGFLFVASET 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++ES +L PI+D
Sbjct: 366 GNHHFYQFEKLGDDDEETEFPSDDVSADLADPIIPVYFNVRDAENLNLVESVNSLNPIMD 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+ DL + Q+ T G + R +++G+ + E +LP + +W +
Sbjct: 426 CKITDLLAEDAPQIYTICGTGARSTFRTLKHGLDVSEIVESELPSVPSAVWTTKLTRKDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D +VLSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIVLSFTNGTLVLSI-GETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPKGIRHIL 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P ++I + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADH--RVNEWPAPQHRTIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V L + E ++ AVG D + R+LSL S++ + P
Sbjct: 603 VTSLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
I+ + T YL + L G LD +G L+D + LG +P L
Sbjct: 657 NIMSMAD-STSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFGVSVK 715
Query: 461 STTNVFACSDRPTVIYS 477
+ V A S RP + YS
Sbjct: 716 GQSAVLALSSRPWLGYS 732
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N+ +L +L E A+S+ + F +D T+ V+GT V +P I F
Sbjct: 864 NSKSVLSRLELEENESAVSVAAVSFASQDNETFLVVGTGKDVVTYPRSFSAGFIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
D +L+ I + +I+ ++ F G+L+A I +R+++ ++ LR + + +
Sbjct: 924 EDGRELEFIHKTKIEEPPLALLAFQGRLVAGIGKNLRVYDLGMKQMLRKCQVEASPNLIV 983
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK E D W T+ ++D E G +
Sbjct: 984 GLQTQGSRIIVSDVQESVTYVVYKYQENQLIPFVDDVIARWTTATTMVDYETTAGGDKFG 1043
Query: 1189 NLFI--CQKDSAATSDED 1204
NL++ C K + SDED
Sbjct: 1044 NLWLVRCPKKVSEESDED 1061
>gi|335310432|ref|XP_003362030.1| PREDICTED: splicing factor 3B subunit 3-like [Sus scrofa]
Length = 701
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 153/343 (44%), Gaps = 43/343 (12%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E +++ + + + L G +FV S G+ L ++
Sbjct: 307 GDIFKITLETDEDM-----VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 361
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
DE + S M + +L+PI+ + DL + Q
Sbjct: 362 HLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQ 421
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SFV T
Sbjct: 422 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 481
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W+ P
Sbjct: 482 LVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK--RVNEWKTP 538
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACLDISPLSNEE 361
K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +V C+ ++ + E
Sbjct: 539 GKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGE 598
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIP 404
+++ AVGL D + R++SL + C +PL + +P
Sbjct: 599 -----QRSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALP 633
>gi|119173562|ref|XP_001239205.1| hypothetical protein CIMG_10227 [Coccidioides immitis RS]
Length = 1208
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 123/513 (23%), Positives = 199/513 (38%), Gaps = 52/513 (10%)
Query: 83 LLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
LL G LF + ++ E +G T V+ K++ + + L L NG +FV S G
Sbjct: 307 LLQTEDGDLFKVTMDMVEDENGQLTGEVQRLKLKYFDTVPVASSLCILKNGFLFVASETG 366
Query: 141 DSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIIDM 173
+ + + D++ ++++ES +L P++
Sbjct: 367 NHHFYQFEKLGDDDEETEFSSDDFSADPSEPLAPVYFRPRPAENLNLVESINSLNPLMSC 426
Query: 174 VVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNL 232
+ +L Q T SG + R +++G+ + E +LP + +W +
Sbjct: 427 KITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQY 486
Query: 233 DNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 487 DAYIILSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHA 545
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYEV 349
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R + V
Sbjct: 546 DR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTV 603
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPRS 406
CL + E ++ AVG D + R+LSL +LE + L S
Sbjct: 604 TCLSLG-----EVPPGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALS 657
Query: 407 ILM----TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLST 462
I+ T YL + L G LD +G L+D + LG +P L +
Sbjct: 658 IMSMVDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFSVSVKEQ 717
Query: 463 TNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTFGTI 520
V A S RP + YS F L V S N +E + + +I
Sbjct: 718 RAVLALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSI 777
Query: 521 DEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
+++ L T+PL PR F VI
Sbjct: 778 EKLDNNLLQETIPLAYTPRHFVRHPEQPLFYVI 810
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N+ ++ +L E A+S+ + F +D T+ V+GT VV+P + I F
Sbjct: 864 NSKAVISRIELEENEAAVSVAAVPFSSQDDETFLVVGTGKDMVVYPPSSSCGFIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
D +L+ I + +++ +++ F G+LLA I +R+++ ++ LR + + +
Sbjct: 924 EDGKELEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEVVPRLIV 983
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK E + D W T ++D E G +
Sbjct: 984 GLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGDKFG 1043
Query: 1189 NLFI--CQKDSAATSDED 1204
NL++ C + ++ +DED
Sbjct: 1044 NLWLLRCPQKASEEADED 1061
>gi|392869416|gb|EJB11761.1| pre-mRNA-splicing factor rse1 [Coccidioides immitis RS]
Length = 1209
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 123/513 (23%), Positives = 199/513 (38%), Gaps = 52/513 (10%)
Query: 83 LLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
LL G LF + ++ E +G T V+ K++ + + L L NG +FV S G
Sbjct: 307 LLQTEDGDLFKVTMDMVEDENGQLTGEVQRLKLKYFDTVPVASSLCILKNGFLFVASETG 366
Query: 141 DSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIIDM 173
+ + + D++ ++++ES +L P++
Sbjct: 367 NHHFYQFEKLGDDDEETEFSSDDFSADPSEPLAPVYFRPRPAENLNLVESINSLNPLMSC 426
Query: 174 VVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNL 232
+ +L Q T SG + R +++G+ + E +LP + +W +
Sbjct: 427 KITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQY 486
Query: 233 DNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 487 DAYIILSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHA 545
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYEV 349
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R + V
Sbjct: 546 DR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTV 603
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPRS 406
CL + E ++ AVG D + R+LSL +LE + L S
Sbjct: 604 TCLSLG-----EVPPGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALS 657
Query: 407 ILM----TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLST 462
I+ T YL + L G LD +G L+D + LG +P L +
Sbjct: 658 IMSMVDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFSVSVKEQ 717
Query: 463 TNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTFGTI 520
V A S RP + YS F L V S N +E + + +I
Sbjct: 718 RAVLALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSI 777
Query: 521 DEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
+++ L T+PL PR F VI
Sbjct: 778 EKLDNNLLQETIPLAYTPRHFVRHPEQPLFYVI 810
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N+ ++ +L E A+S+ + F +D T+ V+GT VV+P + I F
Sbjct: 864 NSKAVISRIELEENEAAVSVAAVPFSSQDDETFLVVGTGKDMVVYPPSSSCGFIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
D +L+ I + +++ +++ F G+LLA I +R+++ ++ LR + + +
Sbjct: 924 EDGKELEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEVVPRLIV 983
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK E + D W T ++D E G +
Sbjct: 984 GLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGDKFG 1043
Query: 1189 NLFI--CQKDSAATSDED 1204
NL++ C + ++ +DED
Sbjct: 1044 NLWLLRCPQKASEEADED 1061
>gi|340367935|ref|XP_003382508.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Amphimedon
queenslandica]
Length = 1160
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 108/489 (22%), Positives = 205/489 (41%), Gaps = 73/489 (14%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F ++L+ E+ + V K++ + + L L +G++F S G+
Sbjct: 301 FLLQSEQGDIFKVMLDVEDDI-----VVRIKIKYFDTVPVCSSLCVLKSGLLFCSSEFGN 355
Query: 142 SQLVKLNR-------------------------SPDENGTYVSVMESFTNLAPIIDMVVV 176
L ++ P +N V MES L+PI+ +
Sbjct: 356 HYLYQIAHLGDDSEREFHSDYPLEEGETFFFGPRPLKNLILVDEMES---LSPIMSCQIA 412
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNT 235
DL + QL G SLR++R+G+ + E A +LPG +W + S ++ D+
Sbjct: 413 DLANEDTPQLYAACGRGPRSSLRVLRHGLEVTEMAVSELPGNPHAVWTVKKDSKEDFDSY 472
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+V+SF+ T +L++ G VEE GF T C + ++Q+ P I S
Sbjct: 473 IVVSFMNATLILSI-GETVEEVTDSGFLGTTPTLACSQLGDDALIQIYPEGIRHI--RSD 529
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYEVACL 352
RV+ W P + I + N++QV+ A +G ++ Y E+ S ++ + R + EV C+
Sbjct: 530 KRVNEWRSPGKRLIRQCAVNEHQVVIALSGGEIVYFEMDQSGQLNEYTERKEMTAEVICI 589
Query: 353 DISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF 412
+ + + + + AVGL +D + R++SL + + +PL + +P C
Sbjct: 590 SLGSVPPGQ-----QRCRFLAVGL-SDQTVRIISLDPHDTL--QPLSMQALPALPESLCI 641
Query: 413 EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRP 472
SG ++D V+ G L L V A S R
Sbjct: 642 VN--------------------MSGNVSDDTTVSTGG----LFLNIGLQNGGVIAVSSRT 677
Query: 473 TVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIR-TV 531
+ Y+ + + ++ + + S +E P+ + + +T ++++ + + +
Sbjct: 678 WLNYTYQSRFHLTPLSYDLLEYASSFTSEQCPEGMVAISSNTLRILALEKLGVVFNQVST 737
Query: 532 PLGEAPRRI 540
PL PR++
Sbjct: 738 PLQYTPRKL 746
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 1007 LLIIDQNTFEILHAHQLFPGEYALSLISSKFGE--DPNTYFVLGTA---VVHPEENEPKQ 1061
L ++ N + L Q E A SL +F D + V+GTA ++ P
Sbjct: 824 LRVMHPNQGKTLDIVQFEQNEAAFSLAVCQFVSKGDLEWFVVVGTAKDMIITPRA--ISS 881
Query: 1062 GRIIIFHY--DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LE 1118
G +I+F D KL+ + ++ +M F G+LL + +R+++ +K LR E
Sbjct: 882 GSLIVFRLSPDGSKLEHVHTTQLDDVPIAMAPFQGRLLVGVGKLLRIYDIGKKKMLRKCE 941
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
H ++ + +KV G + VGD+ ++ L Y+ E + + P + T+ ILD
Sbjct: 942 NKHLPYLV-VDIKVMGRRVYVGDVQEAVHFLYYRPHENQLVIFADEVVPRFCTTSCILDY 1000
Query: 1179 ELFLGAENSYNLFICQKDSAATS--DED 1204
A+ N+ I + S T DED
Sbjct: 1001 NTVASADKFGNITILRLPSDVTDQVDED 1028
>gi|358391805|gb|EHK41209.1| hypothetical protein TRIATDRAFT_135379 [Trichoderma atroviride IMI
206040]
Length = 1212
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 127/549 (23%), Positives = 220/549 (40%), Gaps = 72/549 (13%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G +F + ++ E +G T V+ K++ +
Sbjct: 297 MHKLKG--SAGAFF------FLLQTEDGDMFKVTIDMVEDEEGNTTGEVRRLKIKYFDTV 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN---------------GTYVSV---- 160
L L +G ++V S+ G+ + + D++ +Y V
Sbjct: 349 PAASNLCILKSGFLYVASQFGNFSFYQFEKLGDDDEELEFTSDDFPVDAQASYTPVYFYP 408
Query: 161 --------MESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+ES ++ P++D + +L + Q+ T G + R +++G+ I E
Sbjct: 409 RPLENLVLVESIPSMNPLLDCKIANLTGEDAPQIYTVCGNGARSTFRTLKHGLEINEIVS 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPGI +W L + + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGIPSAVWTLKLNRSEQYDAYIVLSFTNGTLVLSI-GETVEEVSDSGFLTSVPTLAA 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I +V+ W+ P +SI S N +QV A +G VY+
Sbjct: 528 QLLGDDGLIQVHPKG---IRHIRNGQVNQWDAPQHRSIVAASTNAHQVAIALSSGEIVYF 584
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V CL + E ++ AVG D + R+LSL
Sbjct: 585 EMDDDGSLAEYDDKKEMFGTVTCLSLG-----EVPEGRLRSSFLAVGC-DDCTVRILSLD 638
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRL 439
+LE + L P S+ + E YL + L G LD +G L
Sbjct: 639 PESTLENKSVQALTAA--PTSLAIISMEDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGEL 696
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCS 497
TD ++ LG + L T V S RP + Y+ V + ++ + +
Sbjct: 697 TDTRQKFLGPKQVRLFQVTVQGRTCVLGLSSRPWLGYADPITKSFVVTPLSYVDLEWGWN 756
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITTRI 556
+E + + T ++D + I+ ++PL P+++ F VI
Sbjct: 757 FTSEQCEEGIVGIQGQTLRIFSVDRLGDTLIQNSIPLTYTPKKMVKHPEHPLFYVI---- 812
Query: 557 DIQEADGST 565
EAD T
Sbjct: 813 ---EADNHT 818
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 8/195 (4%)
Query: 1027 EYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082
E A+SL F +D T+ V+GT VV+P I F + L I + ++
Sbjct: 881 EAAVSLAIVTFASQDNETFLVVGTGKDMVVNPRSFSDAYVHIYRFEQEGRGLVFIHKTKV 940
Query: 1083 KGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDL 1142
+ ++ F G++L I +R+++ + LR + + L +G+ I+VGD+
Sbjct: 941 EEPPMAIIPFQGRVLVGIGKILRIYDLGMRQLLRKTQAEVAPQLINSLSTQGNRIIVGDV 1000
Query: 1143 MRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSD 1202
+ +T + YK D W T ++D E G + N+F+ + A+ +
Sbjct: 1001 QQGITYVVYKQTTNKLIPFVDDTVARWTTCSTMVDYETVAGGDKFGNIFVVRSPQKASEE 1060
Query: 1203 EDRTHLQEVGTVHLV 1217
D +E +HL+
Sbjct: 1061 AD----EEQAGLHLL 1071
>gi|346327528|gb|EGX97124.1| pre-mRNA splicing factor RSE1 [Cordyceps militaris CM01]
Length = 1206
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 128/546 (23%), Positives = 217/546 (39%), Gaps = 66/546 (12%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E +G T V+ K++ +
Sbjct: 291 MHKLKG--SAGAFF------FLLQSDDGDLFKITIDMVEDEEGAPTGEVQRMKIKYFDTV 342
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN---------------GTY------- 157
+ L L +G ++V S+ G+ + + D++ Y
Sbjct: 343 PVATSLCILKSGFLYVASQFGNYAFYQFEKLGDDDDEVEFSSEDFPVDPLAAYEPVYFYP 402
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+++++S + P++D V +L + Q+ T G + R +++G+ + E
Sbjct: 403 RLAENLALVDSIPAMNPLLDCKVANLTGEDAPQIFTICGNGARSTFRTLKHGLEVNEIVA 462
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPG+ +W L + S + D +VLSF T VL++ G VEE GF + T
Sbjct: 463 SELPGVPSAVWTLKLNSDEQYDAYIVLSFTNGTLVLSI-GETVEEVSDSGFLTSVPTIAA 521
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYL 330
+ ++QV P I V+ W P +SI S N +QV A + ++ Y
Sbjct: 522 QLLGTDGLIQVHPRG---IRHIRNGNVNEWSAPQHRSIVAASTNSHQVAIALSSGEIVYF 578
Query: 331 EVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--- 387
E+ LA + E+ ++ LS E ++ AVG D + R+LSL
Sbjct: 579 EMDSD--GSLAEYDEKKEMFGT-VTALSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPE 634
Query: 388 -----PSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDK 442
S++ + P IIP + YL + L G LD +G LTD
Sbjct: 635 STLENKSVQALTAAPTSLAIIPMDD-SSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDT 693
Query: 443 KKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--A 500
++ LG +P L T V S RP + Y++ F L V+ N +
Sbjct: 694 RQKFLGPKPVRLFQVTVGGRTCVLGLSSRPWLGYANPITSSFEITPLSYVDLEWGWNFSS 753
Query: 501 ESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQ 559
E D + + +ID + + L ++PL P++ F I
Sbjct: 754 EQCEDGVVGIQGQSLRIFSIDRLGETLLQSSIPLTYTPKKFVKHPDEPLFYTI------- 806
Query: 560 EADGST 565
EAD T
Sbjct: 807 EADNHT 812
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 1027 EYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDG--KLQQIAEK 1080
E A+S+ F +D ++ V+GT V++P + + I I+ + G +L+ I +
Sbjct: 875 EAAVSVAVVSFASQDNESFLVVGTGKDIVLNPRSS--SEAYIYIYRFQQGGRELEFIHKT 932
Query: 1081 EIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVG 1140
+I+ ++ F GKLLA I T+R+++ + LR + + L +G I+V
Sbjct: 933 KIEEPATALLPFQGKLLAGIGKTLRMYDLGMRQLLRKAQAEVVPQQIVSLNTQGSRIVVS 992
Query: 1141 DLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAAT 1200
D+ + +TL+ YK+ D W T ++D E G + N+FI + + A+
Sbjct: 993 DVQQGVTLVVYKSASNKLIPFVDDSIARWSTCTTMVDYESVAGGDKFGNMFIVRSPAKAS 1052
Query: 1201 SDEDRTHLQEVGTVHLV 1217
+ D ++ +HLV
Sbjct: 1053 EEAD----EDAAGLHLV 1065
>gi|302654421|ref|XP_003019018.1| hypothetical protein TRV_07031 [Trichophyton verrucosum HKI 0517]
gi|291182708|gb|EFE38373.1| hypothetical protein TRV_07031 [Trichophyton verrucosum HKI 0517]
Length = 802
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 184/461 (39%), Gaps = 49/461 (10%)
Query: 82 YLLGDLAGRLFMLLLE--KEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + +E ++E T VK K++ + + L L +G +FV S
Sbjct: 306 FLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLFVASET 365
Query: 140 GDS---QLVKLNRSPDE----NGTYVSVM--------------------ESFTNLAPIID 172
G+ Q KL DE + Y +V+ ES +L P++
Sbjct: 366 GNQHFYQFEKLGDDDDEIEFISDDYSAVISEPLPPVYFRPRPAENLNLVESIASLNPLMA 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+ ++ + Q+ T G S R +++G+ + E +LP + +W +
Sbjct: 426 ASIANITEEDAPQIYTLCGTSARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLSRNDQ 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D +VLSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIVLSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADQ--RVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E ++ AVG D + R+LSL +LE + L
Sbjct: 603 VTCLSLG-----EVPEGRGRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656
Query: 406 SILM----TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ T YL + L G LD +G L+D + LG +P L +
Sbjct: 657 SIMSMIDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKE 716
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAES 502
V A S R + YS F+ L V S N S
Sbjct: 717 QRAVLALSSRSWLGYSDVQTKSFTLTPLNYVGLEWSWNFSS 757
>gi|302504587|ref|XP_003014252.1| hypothetical protein ARB_07557 [Arthroderma benhamiae CBS 112371]
gi|291177820|gb|EFE33612.1| hypothetical protein ARB_07557 [Arthroderma benhamiae CBS 112371]
Length = 762
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 183/461 (39%), Gaps = 49/461 (10%)
Query: 82 YLLGDLAGRLFMLLLE--KEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + +E ++E T VK K++ + + L L +G +FV S
Sbjct: 306 FLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLFVASET 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++ES +L P++
Sbjct: 366 GNQHFYQFEKLGDDDDEIEFISDDCSAVISEPLPPVYFRPRPAENLNLVESIASLNPLMA 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+ ++ + Q+ T G S R +++G+ + E +LP + +W +
Sbjct: 426 ASIANITEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLSRNDQ 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D +VLSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIVLSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADQ--RVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E ++ AVG D + R+LSL +LE + L
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656
Query: 406 SILM----TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ T YL + L G LD +G L+D + LG +P L +
Sbjct: 657 SIMSMIDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKE 716
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAES 502
V A S R + YS F+ L V S N S
Sbjct: 717 QRAVLALSSRSWLGYSDVQTKSFTLTPLNYVGLEWSWNFSS 757
>gi|294875343|ref|XP_002767276.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
gi|239868839|gb|EEQ99993.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
Length = 1258
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 113/485 (23%), Positives = 195/485 (40%), Gaps = 91/485 (18%)
Query: 60 WGFHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEI 119
W H L+ F +L+ G L+ + L +E + V E + I
Sbjct: 282 WSRHKLKNFFF-----------FLIQSEYGDLYKVTLSHKEGV-----VSEIQCSYFDSI 325
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKL------------NRSPDENGTYVSV------- 160
+ + L G +F S G+ L + + P+ V+
Sbjct: 326 PVAISICVLKTGFLFAASEFGNHALYQFASLGDVTPALVTSSHPNRENAVVAFKPRTLKN 385
Query: 161 ---MESFTNLAPIIDMVVVD--------LERQGQG-------------QLVTCSGGFKEG 196
+ ++LAPI DM V+D L+ G G Q+ SG
Sbjct: 386 LTPFDELSSLAPITDMKVMDCFSTQTQVLQADGSGMQQTVTTGMSVGCQIYALSGRGPRS 445
Query: 197 SLRIIRNGIGIEEHACIDLPG----------IKGIWALSIGSPKNLDNTLVLSFVGHTRV 246
+LRI+R+G+ + E +LPG +A D +V+SFV T
Sbjct: 446 ALRILRHGLTLGEAGASELPGQPNALFTIKPFGASYAPVAEGEVESDRYIVVSFVDQTLT 505
Query: 247 LTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNG 306
L ++ + E GF +Q T + + ++ +QV P+ + + R + W P G
Sbjct: 506 LLVTSDNIHEVTDSGFAKEQPTLFAMRMQDKSAIQVMPTG--IRHVAAGRRTTEWRAPPG 563
Query: 307 KSISVVSCNKNQVLCA-TGCDVYYLEVHG---SEIKQLAHRALEYEVACLDISPLSNEET 362
+ +++ + N +QV+ A +G ++ E+ + ++A R + EVA L + PLS+ T
Sbjct: 564 RQVTMAASNGSQVVIALSGGEIQLFELDADTNGHLSEVAKRDIGCEVAALTVQPLSSGRT 623
Query: 363 SSEPAKAQLAAVGLWTDISARLLSLPS---LEEVCKEPLGGEIIPRSILMTCF-EGHC-- 416
++Q AV D S R+LSL S L ++ + L S+ M F EG
Sbjct: 624 -----RSQFMAVA-GVDSSVRVLSLDSDRPLRQLAAQAL--RTTASSVCMLQFGEGTTAT 675
Query: 417 -YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR-SLSTTNVFACSDRPTV 474
YL + L DG + +D +G+L+D+++ LG + L + A S RP +
Sbjct: 676 IYLAIGLEDGVLVRSVVDGVTGQLSDQRQRVLGPRRVTLCPITVDGGRPAMVAMSSRPFL 735
Query: 475 IYSSN 479
+ +N
Sbjct: 736 CFQAN 740
>gi|71004436|ref|XP_756884.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
gi|74704394|sp|Q4PGM6.1|RSE1_USTMA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|46095609|gb|EAK80842.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
Length = 1221
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 207/507 (40%), Gaps = 62/507 (12%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G LF + +E ++ ++ K++ + + L L +G +FV S G L
Sbjct: 319 GDLFKITMEHQDD-----EIRSLKIKYFDTVPVASGLVILRSGFLFVASEYGAQLLYSFQ 373
Query: 149 RSPDENG--TYVSV-------------MESFT--------------NLAPIIDMVVVDLE 179
+ D++ Y+S + +FT +L PI+D ++
Sbjct: 374 KLGDDDDLPEYISTDYDENGAGRRRPQLPTFTPRPLDNLVQVDEMPSLDPILDAKPLNPL 433
Query: 180 RQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVL 238
Q+ G S +++R+G+ ++E DLPG+ +W I D+ ++L
Sbjct: 434 AADSPQIFAACGRGARSSFKMLRHGLEVQEAVSSDLPGVPSAVWTTKITQQDEYDSYIIL 493
Query: 239 SFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARV 298
SFV T VL++ G +EE GF + T + +LQV P + + + +
Sbjct: 494 SFVNGTLVLSI-GETIEEVSDSGFLTSSSTLAVQQLGQDALLQVHPHGIRHVLVDKQ--I 550
Query: 299 SSWEPP---NGKSISVVSC--NKNQVLCATGCD--VYY-LEVHGSEIKQLAHRALEYEVA 350
+ W P NG+ ++V+ N+ QV+ A + VY+ L++ G + +A+ V
Sbjct: 551 NEWATPSLPNGRQTTIVATCTNERQVVVALSSNELVYFELDMDGQLNEYQERKAMGAGVL 610
Query: 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSIL-- 408
+ + P E P AVG D + R++SL + + P S +
Sbjct: 611 TMSM-PDCPEGRQRTP----YLAVGC-DDSTVRIISLEPNSTLASISIQALTAPASSICM 664
Query: 409 -----MTCFEGHCYLLVALG--DGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
T H V +G +G + LD +G+LTD + LG++ L +
Sbjct: 665 AEMLDATIDRNHATTFVNIGLQNGVLLRTILDAVTGQLTDTRTRFLGSKAVRLIRTKVHG 724
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTID 521
V A S R + Y+ +L F + ++H S +AE P+ L ST TI
Sbjct: 725 QAAVMALSTRTWLSYTYQDRLQFVPLIFDVLDHAWSFSAELCPEGLIGIVGSTLRIFTIP 784
Query: 522 EI-QKLHIRTVPLGEAPRRIAYQESSQ 547
+ KL +V L PR+IA + Q
Sbjct: 785 SLASKLKQDSVALSYTPRKIANHPNEQ 811
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 995 PADFN-MEVEVHN----LLIIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLG 1048
PA+F + E N + +D + H ++ E A S+ F + V+G
Sbjct: 852 PAEFGAIRAEAGNWASCIRAVDGVQAQTTHRLEMDDNEAAFSIAVVPFASAEKEVMLVVG 911
Query: 1049 TAV-VHPEENEPKQGRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVR 1105
+AV V K+ + + D+G+ L+ + + E+ + F G+LLA I +R
Sbjct: 912 SAVDVVLSPRSCKKAYLTTYRLLDNGRELELLHKTEVDDIPLVLRAFQGRLLAGIGKALR 971
Query: 1106 LFEWTNEKELRLECSHFNNIIALF-LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRD 1164
+++ +K LR +C + + A+ L +G I+VGD+ S+ YK +E + D
Sbjct: 972 IYDLGKKKLLR-KCENRSFPTAVVSLDAQGSRIVVGDMQESIIFASYKPLENRLVTFADD 1030
Query: 1165 YNPNWMTSIEILDDELFLGAENSYNLFICQKD--SAATSDEDRTHL 1208
P ++T +LD + A+ N+++ + D ++ + DED T +
Sbjct: 1031 VMPKFVTRCTMLDYDTVAAADKFGNIYVLRLDGNTSRSVDEDPTGM 1076
Score = 40.4 bits (93), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 3 SLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
S +++R+G+ ++E DLPG+ +W I D+ ++LSFV T VL++
Sbjct: 451 SFKMLRHGLEVQEAVSSDLPGVPSAVWTTKITQQDEYDSYIILSFVNGTLVLSI 504
>gi|226293297|gb|EEH48717.1| pre-mRNA-splicing factor rse1 [Paracoccidioides brasiliensis Pb18]
Length = 1208
Score = 100 bits (248), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 177/444 (39%), Gaps = 51/444 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + ++ E +G T V+ K++ + I L L +G +FV S
Sbjct: 306 FLLQTEDGDLFKVTIDMVEDDNGQITGEVRRLKLKYFDTVPIASSLCILKSGFLFVASET 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ V ++E+ +L P++D
Sbjct: 366 GNHHFYQFEKLGDDDDEIEFTSDSFSANPSEPLPPVYFHPRLSENVHLVENVNSLNPLMD 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+ +L Q+ T G S R +++G+ + E +LP + +W +
Sbjct: 426 CKITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVESELPSVPSAVWTSKLTREDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIILSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V CL + E A++ AVG D + R+LSL S++ + P
Sbjct: 603 VTCLSLG-----EVPKGRARSSFLAVGC-DDSTVRILSLDPDSTLGNKSVQALTSAPSAL 656
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
I+ + T YL + L G LD +G L+D + LG +P L
Sbjct: 657 SIMAMAD-STSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVK 715
Query: 461 STTNVFACSDRPTVIYSSNHKLVF 484
V A S RP + YS F
Sbjct: 716 EQKAVLALSSRPWLGYSDLQTKAF 739
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N+ ++ +L E A+S+ + F +D T+ V+GT VV+P I F
Sbjct: 864 NSKSVVSQIELEENEAAVSVAAVSFSSQDDETFLVVGTGKDMVVNPRSCSAGFIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
D +L+ I + +++ ++ F G+LLA I + VR+++ + LR + + +
Sbjct: 924 EDGKELEFIHKTKVEQPPVALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASVVPHLVV 983
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK+ E D W T ++D E G +
Sbjct: 984 GLQTQGSRIIVSDVQESVTYVVYKSQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFG 1043
Query: 1189 NLFI--CQKDSAATSDED 1204
NL++ C ++ +DED
Sbjct: 1044 NLWLLRCPAKASEEADED 1061
>gi|428180158|gb|EKX49026.1| hypothetical protein GUITHDRAFT_68305 [Guillardia theta CCMP2712]
Length = 1202
Score = 100 bits (248), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 127/522 (24%), Positives = 219/522 (41%), Gaps = 67/522 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G L+ L L ++ V E + + + + +T L G +FV S G+
Sbjct: 297 FLLQSEIGDLYRLTLTYNDE-----EVSEINITYFDTVPVAQSITILKTGFLFVASEFGN 351
Query: 142 SQLVKL----------------------------NRSPDENGTYVSVMESFTNLAPIIDM 173
L + P +N V MES L+PI+DM
Sbjct: 352 HALYQFLSIKGSDESDMMPVEVEIEGETIEIPHFAPRPLKNLLLVDEMES---LSPILDM 408
Query: 174 VVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK-GIWALSIGSPKNL 232
V+DL + Q+ G +LR +R+G+ + E A +LP +W + S
Sbjct: 409 RVLDLAGEETPQIYALCGKGPRSTLRTLRHGLAVAEMAVSELPSNPLAVWTVKGSSKDAA 468
Query: 233 DNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
D +V++F T VL++ G VEE GF + +T + ++LQV P+ L +
Sbjct: 469 DKYIVVTFANATIVLSI-GDTVEEVTDSGFLATNKTLSVSLLGDDSLLQVHPNG--LRTV 525
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQVLCATG-CDVYYLEVHGSEIKQLAHRALEY---- 347
S R+S + PPN I++V+ N+ QV+ A + Y E+ + QL +A
Sbjct: 526 RSDKRISQFTPPNKGVINLVAVNQQQVVVALADHTMIYFELDA--VGQLQEKAKPEIGGG 583
Query: 348 EVACLDISPLSNEETSSEPAKAQLAAVGLWTDIS--ARLLSLP--------SLEEVCKEP 397
++A LDISPL + + + AVG D S R+LSL S + + +P
Sbjct: 584 QIAALDISPLGAGRS-----RGRFLAVGASVDGSWFVRILSLDPGSFMHIVSRQALPAKP 638
Query: 398 LGGEIIPRSILMTCFEGHC---YLLVALGDGSMFYFSLDPASGRLTDKKKVT-LGTQPTV 453
+I SI +G +L L +G + ++DP +G+L + + LGT+P
Sbjct: 639 ESLCLIEISIGAAQSDGGTPTLFLFAGLENGVLMRITVDPITGQLAPEFRTRFLGTKPVK 698
Query: 454 LKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDS 513
L V A S R + Y+ + + ++ + + ++ P+ +
Sbjct: 699 LFKVLVQEQPAVLALSSRSWLAYNFQGRYQITPLSYETLEYASGFASDQCPEGFVCVAAN 758
Query: 514 TFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
T T++ + + + ++ L PR+ A + S F V+ T
Sbjct: 759 TLRILTVERLGEVFNQHSMKLSFTPRKSALLKDSGCFVVLET 800
Score = 83.6 bits (205), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 5/189 (2%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSL-ISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIF 1067
+ID N E +L P E ALS+ +++ + +T+ GTAV H + G + +
Sbjct: 849 VIDPNERETKQIIELDPNEAALSVCVATFYDRKGHTFLCFGTAVGHKVGSRTGSGFLHTY 908
Query: 1068 HYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN--NI 1125
+L + + I G ++C F G+LL + S +RL+E K LR +C + N N+
Sbjct: 909 SVVGSQLTFVHKTPIDGVPRALCSFQGRLLVGVGSALRLYEMGKRKLLR-KCENRNIPNL 967
Query: 1126 IALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAE 1185
+ + + GD I VGD+ S++ L+Y + + D +P WMT+ +D + GA+
Sbjct: 968 V-VTISTMGDRIYVGDVAESISFLKYNRILNELVIFADDTHPRWMTAACPVDYDTVAGAD 1026
Query: 1186 NSYNLFICQ 1194
N+F+ +
Sbjct: 1027 KFGNIFLTR 1035
>gi|225683909|gb|EEH22193.1| pre-mRNA-splicing factor rse1 [Paracoccidioides brasiliensis Pb03]
Length = 1209
Score = 100 bits (248), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 177/444 (39%), Gaps = 51/444 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + ++ E +G T V+ K++ + I L L +G +FV S
Sbjct: 306 FLLQTEDGDLFKVTIDMVEDDNGQITGEVRRLKLKYFDTVPIASSLCILKSGFLFVASET 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ V ++E+ +L P++D
Sbjct: 366 GNHHFYQFEKLGDDDDEIEFTSDSFSANPSEPLPPVYFHPRLSENVHLVENVNSLNPLMD 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+ +L Q+ T G S R +++G+ + E +LP + +W +
Sbjct: 426 CKITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVESELPSVPSAVWTSKLTREDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIILSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADR--RVNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V CL + E A++ AVG D + R+LSL S++ + P
Sbjct: 603 VTCLSLG-----EVPKGRARSSFLAVGC-DDSTVRILSLDPDSTLGNKSVQALTSAPSAL 656
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
I+ + T YL + L G LD +G L+D + LG +P L
Sbjct: 657 SIMAMAD-STSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVK 715
Query: 461 STTNVFACSDRPTVIYSSNHKLVF 484
V A S RP + YS F
Sbjct: 716 EQKAVLALSSRPWLGYSDLQTKAF 739
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N+ ++ +L E A+S+ + F +D T+ V+GT VV+P I F
Sbjct: 864 NSKSVVSQIELEENEAAVSVAAVSFSSQDDETFLVVGTGKDMVVNPRSCSAGFIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
D +L+ I + +++ ++ F G+LLA I + VR+++ + LR + + +
Sbjct: 924 EDGKELEFIHKTKVEQPPVALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASVVPHLVV 983
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + +K+ E D W T ++D E G +
Sbjct: 984 GLQTQGSRIIVSDVQESVTYVVFKSQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFG 1043
Query: 1189 NLFI--CQKDSAATSDED 1204
NL++ C ++ +DED
Sbjct: 1044 NLWLLRCPAKASEEADED 1061
>gi|321249291|ref|XP_003191408.1| U2 snRNA binding protein [Cryptococcus gattii WM276]
gi|317457875|gb|ADV19621.1| U2 snRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 1217
Score = 100 bits (248), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 191/483 (39%), Gaps = 48/483 (9%)
Query: 112 KVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTY-------------- 157
K++ + + L L G ++V S D L + +++G
Sbjct: 337 KIKYFDTVPVANSLCILKRGYIYVASEFSDQNLYQFQSLAEDDGEQEWSSTDYPENGNID 396
Query: 158 ---------------VSVMESFTNLAPIIDMVVVDL--ERQGQGQLVTCSGGFKEGSLRI 200
+ +++S +L PI D VV+L Q+ G + R
Sbjct: 397 GPLPFAFFDPQPLRNLLLVDSVPSLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRT 456
Query: 201 IRNGIGIEEHACIDLPGIK-GIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
+++G+ + E LPG+ +W L + D+ +VLSF T VL++ G +EE
Sbjct: 457 LKHGLDVTEMVSSPLPGVPTNVWTLKLTEDDEYDSYIVLSFPNGTLVLSI-GETIEEVND 515
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF S T + +LQV P L + RV W P G++I + N+ QV
Sbjct: 516 TGFLSSGPTLAVQQLGNAGLLQVHPYG--LRHIRAADRVDEWPAPPGQTIVAATTNQRQV 573
Query: 320 LCA--TGCDVYY-LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKA------Q 370
+ A T VY+ L+ GS + +AL C+ I+ + E P A
Sbjct: 574 VIALSTAELVYFELDPEGSLSEYQEKKALPGNATCVTIAEVP-EGRRRTPFLAVGCDNQT 632
Query: 371 LAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYF 430
++ + L D + LSL +L EI SI +L + L +G +
Sbjct: 633 VSIISLEPDSTLDTLSLQALTAPPTSICLAEIFDTSIDKN--RATMFLNIGLMNGVLLRT 690
Query: 431 SLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLR 490
+DP G L+D + LG +P L +V A S R ++Y+ L +
Sbjct: 691 VVDPVDGSLSDTRLRFLGAKPPKLVRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYD 750
Query: 491 QVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTF 549
+ + SL+A PD L + +T +I ++ +KL + PL PR+ + F
Sbjct: 751 TLEYAWSLSAAMCPDGLIGISGNTLRIFSIPKLGEKLKQDSTPLTYTPRKFISHPFNPVF 810
Query: 550 GVI 552
+I
Sbjct: 811 YMI 813
Score = 45.4 bits (106), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKF---GEDPNTYFVLGTAV---VHPEENEPKQG 1062
++D E + L E A S+ + F G +P + V+GT V + P+ +
Sbjct: 867 VLDPLANETIMTFDLDEDEAAFSIAIAYFERGGGEP--FLVVGTGVKTTLQPKGCKEGYL 924
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHF 1122
R+ L+ + + + + F G LLA + ++RL+E + LR +C +
Sbjct: 925 RVYAIKEQGRVLEFLHKTKTDDIPLCLAGFQGFLLAGVGKSLRLYEMGKKALLR-KCENN 983
Query: 1123 NNIIALF-LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEI-SRDYNPNWMTSIEILDDEL 1180
A+ + V+G I+VGD+ S Y+++ I + D P W+T + +D E
Sbjct: 984 GFPTAVVTINVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYET 1043
Query: 1181 FLGAENSYNLFICQKDSAATS--DEDRT 1206
+ N+FI + D + + D+D T
Sbjct: 1044 VACGDKFGNIFINRLDPSISEKVDDDPT 1071
>gi|340520436|gb|EGR50672.1| predicted protein [Trichoderma reesei QM6a]
Length = 1212
Score = 99.8 bits (247), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 127/549 (23%), Positives = 220/549 (40%), Gaps = 72/549 (13%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G +F + ++ E +G T V+ K++ +
Sbjct: 297 MHKLKG--SAGAFF------FLLQTEDGDMFKVTIDMVEDDEGNTTGEVRRLKIKYFDTV 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN---------------GTYVSV---- 160
L L +G ++V S+ G+ + + D++ +Y V
Sbjct: 349 PPAASLCILKSGFLYVASQFGNFSFYQFEKLGDDDEELEFTSDDFPVDAQASYDPVYFYP 408
Query: 161 --------MESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+ES ++ P++D + +L + Q+ T G + R +++G+ I E
Sbjct: 409 RPLENLVLVESIPSMNPLLDCKIANLTGEDAPQIYTICGNGARSTFRTLKHGLEINEIVS 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPGI +W L + + D +VLSF T VL++ G VEE GF + T
Sbjct: 469 SELPGIPSAVWTLKLNRNEQYDAYIVLSFTNGTLVLSI-GETVEEVSDSGFLTSVPTLAA 527
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I +V+ W+ P +SI + N +QV A +G VY+
Sbjct: 528 QLLGEDGLIQVHPKG---IRHIRNGQVNQWDAPQHRSIVAATTNAHQVAIALSSGEIVYF 584
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V CL + E ++ AVG D + R+LSL
Sbjct: 585 EMDDDGSLAEYDEKKEMFGTVTCLSLG-----EVPEGRLRSSFLAVGC-DDCTVRILSLD 638
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRL 439
+LE + L P S+ + E YL + L G LD +G L
Sbjct: 639 PESTLENKSVQALTAA--PTSLAIISMEDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGEL 696
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCS 497
TD ++ LG + L T V S RP + Y+ V + +N + +
Sbjct: 697 TDTRQKFLGPKQVRLFQVTVQGRTCVLGLSSRPWLGYADPITKTFVVTPLNYVDLEWGWN 756
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITTRI 556
+E + + T ++D + I+ ++PL P+++ F VI
Sbjct: 757 FTSEQCEEGIVGIQGQTLRIFSVDRLGDTLIQSSIPLTYTPKKMVKHPDQPLFYVI---- 812
Query: 557 DIQEADGST 565
EAD T
Sbjct: 813 ---EADNHT 818
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 8/206 (3%)
Query: 1016 EILHAHQLFPGEYALSLISSKFGEDPN-TYFVLGTA---VVHPEENEPKQGRIIIFHYDD 1071
++L L E A+SL F N T+ V+GT V++P I F D
Sbjct: 870 QVLQRIDLEENEAAVSLAIVTFASQENETFLVVGTGKDMVLNPRSFSDAFVHIYRFERDG 929
Query: 1072 GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLK 1131
L I + +++ +M F G++L I +R+++ + LR + + L
Sbjct: 930 RGLVFIHKTKVEEPPMAMIPFQGRVLVGIGKMLRIYDLGMRQLLRKSQAEVAPQQIVSLN 989
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
+G I+VGD+ + +T + +K D W T ++D E G + N+F
Sbjct: 990 AQGSRIVVGDVQQGITYVVFKQQTNKLIPFVDDTVARWTTCSTMVDYETTAGGDKFGNIF 1049
Query: 1192 ICQKDSAATSDEDRTHLQEVGTVHLV 1217
I + A+ + D +E +HL+
Sbjct: 1050 IVRAPQKASEEAD----EEPAGLHLL 1071
>gi|299751161|ref|XP_001830098.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
gi|298409248|gb|EAU91763.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
Length = 1205
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 204/492 (41%), Gaps = 64/492 (13%)
Query: 112 KVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN-------GTYVS----- 159
K++ + + L L G++FV S G+ L + + D++ +Y S
Sbjct: 324 KIKYFETVPVASNLCILKQGLLFVASEFGNHHLYRFCKLGDDDDQPEFSSSSYPSYGMAE 383
Query: 160 -------------------VMESFTNLAPIIDMVVV--DLERQGQGQLVTCSGGFKEGSL 198
+++ ++L P++D ++ L+ + C G S
Sbjct: 384 PEQPLPRASFDPRPMENLMLIDELSSLNPVLDAKILKPSLDSEAPKIFAACGRG-PASSF 442
Query: 199 RIIRNGIGIEEHACIDLPGI---KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVE 255
+I+ +G+ ++E A +LPG +W+ + DN LV+SF T VL++ G +E
Sbjct: 443 KILSHGLEVDEMASSELPGFLAPHSLWSTKRMQTDHYDNLLVMSFQNATIVLSI-GESME 501
Query: 256 ETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCN 315
E + GF + T + ++QV I ++V+ W+ P G++I + N
Sbjct: 502 EVKDSGFLTSMPTLAVQQIGENGLIQVHTHG---IRHLVDSQVNEWKVPQGQTIVAANTN 558
Query: 316 KNQVLCA-TGCDVYYLEV--HGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLA 372
+ QV+ A + ++ Y E+ G + +A+ V L + E +
Sbjct: 559 RRQVVVALSSAEIVYFELDQEGQLNEYQDMKAMGSTVLALGLG-----EVPEGRLRFPYL 613
Query: 373 AVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPRSILMTCF--------EGHCYLLVA 421
AVG D + R++SL +LE + + L P SI + + ++ +
Sbjct: 614 AVGC-EDQTVRVMSLDPDSTLETISLQALTAP--PSSICIAYMLDASINKVQRSMFVNIG 670
Query: 422 LGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHK 481
L +G + LD +G+LTD + LGT+P L + + A S R + YS K
Sbjct: 671 LANGVLLRTVLDGTNGQLTDTRTRFLGTKPVRLLRVKLKGEDAILAISSRVWLNYSHQQK 730
Query: 482 LVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRI 540
+ F+ + S ES P+ + +T + T+ ++ KL +VPL PR+
Sbjct: 731 MEFTPLACETPECASSFTGESCPEGIISIAKNTLSISTVSKLGMKLKQESVPLAFTPRKF 790
Query: 541 AYQESSQTFGVI 552
++ F +I
Sbjct: 791 VTHPGNRFFYLI 802
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 11/189 (5%)
Query: 1027 EYALSLISSKFGEDPNTY-FVLGTAVVH---PEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082
E A S+ F Y V+GTA+ H P + ++ + L+ + E I
Sbjct: 872 EAAFSIAVVPFASTGGEYHLVVGTAMHHLVTPPQASASYLKVYKIVNEGTGLELLHETPI 931
Query: 1083 KGA--CYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILV 1139
+ + ++ F G+LLA + +R+++ +K LR E I++L +G I++
Sbjct: 932 QDSELPRALLAFQGRLLAGVGKALRIYDLGKKKLLRKAETKSPTAIVSL--ATQGSRIVI 989
Query: 1140 GDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAA 1199
GD+ S YK E D P W++++ ++D + N+F+ + DS
Sbjct: 990 GDMQESTLFAVYKEAENRLLIFGDDTQPRWVSAMTMVDYNTVAVGDKFGNIFVNRLDSTI 1049
Query: 1200 TS--DEDRT 1206
+ DED T
Sbjct: 1050 SDQVDEDPT 1058
>gi|147860990|emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]
Length = 1298
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 132/288 (45%), Gaps = 37/288 (12%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVEL---LGEISIPECLTYLDNGVVFVGSRLGDSQLV 145
G LFM+ + +F PKV L L + L + G + +GD ++
Sbjct: 437 GELFMI--------EXSFDSDGPKVNLSDCLYRGLSCKALLWFAGGFLAALVEMGDGMVL 488
Query: 146 KLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGI 205
KL E G V N+API+DM VVD + Q+ C G EGSLRIIR+GI
Sbjct: 489 KL-----EQGRLV-YRSPIQNIAPILDMSVVDCHDEEHDQMFACCGVTPEGSLRIIRSGI 542
Query: 206 GIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFT 263
+E+ GI G W + + + + LVLSFV TRVL++ + + T+ GF
Sbjct: 543 SVEKLLRTAPIYQGITGTWTVKMKVIDSYHSFLVLSFVEETRVLSVGLSFTDVTDSVGFQ 602
Query: 264 SDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR----------VSSWEPPNGKSISVVS 313
D T CG VD ++Q+ + L + A +SW P N SIS+ +
Sbjct: 603 PDVSTLACGVVDDGLLVQIHKNGVKLCLPTTVAHPEGIPLASPICTSWFPEN-ISISLGA 661
Query: 314 CNKNQVLCATG--CDVYYLEV-----HGSEIKQLAHRALEYEVACLDI 354
N ++ AT C ++ L V + EI ++ H L+ EV+C+ I
Sbjct: 662 VGYNLIVVATSSPCFLFILGVRSVSAYQYEIYEMQHVRLQNEVSCISI 709
Score = 45.8 bits (107), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 52/110 (47%)
Query: 447 LGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS 506
+G P L ++ A SDRP ++ S+ H L +++++ + H+ + + P
Sbjct: 882 IGITPVFLVPLSDSLEADIIALSDRPWLLQSARHSLSYTSISFQPSTHVTPVCSMECPMG 941
Query: 507 LALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRI 556
+ +++ + ++L+++ LG PR++ Y S+ V+ T +
Sbjct: 942 ILFVAENSLHLVEMVHSKRLNVQKFYLGGTPRKVLYHSESRLLLVMRTEL 991
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLRIIR+GI +E+ GI G W + + + + LVLSFV TRVL++
Sbjct: 532 EGSLRIIRSGISVEKLLRTAPIYQGITGTWTVKMKVIDSYHSFLVLSFVEETRVLSV 588
>gi|209875989|ref|XP_002139437.1| spliceosomal protein SAP 130 [Cryptosporidium muris RN66]
gi|209555043|gb|EEA05088.1| spliceosomal protein SAP 130, putative [Cryptosporidium muris RN66]
Length = 1300
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 115/513 (22%), Positives = 210/513 (40%), Gaps = 88/513 (17%)
Query: 112 KVELLGEISIPEC--LTYLDNGVVFVGSRLGD-SQLVKLNRSPDENGTY---VSVMESFT 165
K+++ +IP C + L +G +F G+ S L DEN +Y +SV+ T
Sbjct: 317 KIKIYYYDTIPLCNSMLVLRSGFLFAAHEFGNHSNYQFLTLGDDENDSYSSSISVLAGNT 376
Query: 166 ------------------------NLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRII 201
+L+PIIDM + D + Q+ G +LRI
Sbjct: 377 INSYEKVFFRPRNCHCIRKVDIMHSLSPIIDMKIADSSGEFGPQIYVACGRGPRSTLRIC 436
Query: 202 RNGIGIEEHACIDLPGI-KGIWALSIGSPK---------------NLDNTLVLSFVGHTR 245
G +EE A LPG + IW L G N + +++SF+ T
Sbjct: 437 TYGKAVEEMAETPLPGRPRFIWTLKKGGTSYILNKETSETLEDEGNYHSFIIISFIDRTL 496
Query: 246 VLTLSGAEVEETEMGGFTSDQQTFYCGNVDPR-TVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G +VEE FT + T Y +++ + + LQ+ + LI+ E ++ W+ P
Sbjct: 497 VLSV-GEQVEEISDSPFTLSESTIYASSMELKNSYLQILETYVKLITEE---KIYEWKAP 552
Query: 305 NGKSISVVSCNKNQV-LCATGCDVYYLEVHGSE-----------IKQLAHRALEYEVACL 352
+G+ I N Q+ L +G + LE++ + + +L HR + Y++ C+
Sbjct: 553 DGRHIVAADSNGRQISLALSGGYIVILEMNTIDLISGTTNSIMGLTELCHREVSYDIICI 612
Query: 353 DISPLSNEETSSEPAK--AQLAAVGLWTDISARLLSLPSLEEVCKEPL-----GGEIIPR 405
I L P K + AVG TD S R+ + + ++ K+ IP
Sbjct: 613 SIQQL------IYPTKLCREYVAVGTSTDNSVRVYWINTADKKLKQTSTQVMPNASSIPE 666
Query: 406 SILMT--CFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVL-----KTFR 458
+I++ YLL+ L +G + +D +G L+D + LG + + +
Sbjct: 667 NIVLYKPGLNDSLYLLIGLNNGVLLCCIVDELNGTLSDNRSRFLGGKSIKMVRVGIGEYN 726
Query: 459 SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFG 518
LST F ++RP ++ + L + + R ++ + + + + + + +T
Sbjct: 727 KLST---FCMANRPWIVNHNGRSLNYIPIQYRTLDTVAPFHTKQFKNGFVAVSGTTLVIF 783
Query: 519 TI--DEIQKLHIRTVPLGEAPRRIAYQESSQTF 549
+ D+ + L PR++ + Q F
Sbjct: 784 QVLYDDSGTFTHSIIKLNYTPRKLLFLPPPQLF 816
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 12/190 (6%)
Query: 1027 EYALSLISSKFGEDPNTYFVLGTAV---VHPEENEPKQ---GRIIIFHYDDG-KLQQIAE 1079
E +S KF E V+GT + E NE I +++YD L+ +
Sbjct: 968 EGCISACVCKFDEMDLPCLVVGTTYGMKLRKEYNENSSTLGATIKVYNYDTNFNLKLVHV 1027
Query: 1080 KEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNI--IALFLKVKGDFI 1137
I+ M + G+LL SIN T+R++ +K+L +C + NI + ++LKV D I
Sbjct: 1028 TPIENVATCMIGWRGRLLVSINKTLRIYSL-GKKKLLKKC-EYRNIPEVLVWLKVINDRI 1085
Query: 1138 LVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTS-IEILDDELFLGAENSYNLFICQKD 1196
GD+ + + +Y +++ I+ D P W+TS EILD + ++ NL +C+
Sbjct: 1086 FAGDIRHGVIIFKYHSVQNRLSIIANDIMPRWLTSACEILDYHTVITSDKFDNLIVCRVP 1145
Query: 1197 SAATSDEDRT 1206
+ A+S+ D T
Sbjct: 1146 TEASSNYDFT 1155
>gi|430813298|emb|CCJ29330.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1197
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 200/465 (43%), Gaps = 64/465 (13%)
Query: 69 SSLGSLWNGWSERYLLGDLAGRL---FMLLLEKEE---------KMDGTFSVKEPKVELL 116
+ +GSL N ++ ++ + ++ F LL+ E+ DG V+ K++
Sbjct: 279 TRIGSLENSQKKQIIVSSVVHKMRGAFFFLLQNEDGDLFKVTIDSNDG--EVESLKIKYF 336
Query: 117 GEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGT--YVSV-------------- 160
+ + L+ L +G +FV S G+ L + + D+N + SV
Sbjct: 337 DTVPVSTGLSILKSGFLFVASEYGNHHLYQFEKLGDDNNEIEFSSVDFPVLDLNEGYEPS 396
Query: 161 ------------MESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIE 208
++ ++ P++D +++L + Q+ G + R +R G+ +
Sbjct: 397 YFRPRSLENLLLVDDLNSMNPLMDSKILNLTDEDAPQIYALCGRGPRSTFRTLRYGLEVN 456
Query: 209 EHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQ 267
E LPG +W + S D +VLSFV T VL++ G VEE GF S
Sbjct: 457 EIVASGLPGSPTAVWTTKLTSSDQYDAYIVLSFVNGTLVLSI-GETVEEVSDTGFLSSSP 515
Query: 268 TFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGC 325
T + ++QV P I ++ RV+ W+ P +SI V+ N+ QV+ A G
Sbjct: 516 TLAVQQLGDDALIQVHPKGIRHI--QADKRVNEWKTPQHRSIVQVTTNQRQVVVALSNGE 573
Query: 326 DVYY-LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARL 384
VY+ L+ G+ + + + V L I + E P AVG D + R+
Sbjct: 574 IVYFELDDEGNLNEYQDRKQMTGSVTSLSIGHVP-EGRQRHP----FLAVGC-DDSTVRI 627
Query: 385 LSLP---SLEEVCKEPLGGEIIPRSI-LMTCFEGHC---YLLVALGDGSMFYFSLDPASG 437
+SL +LE + + L P S+ +M+ +G+ YL + L +G L+ ++G
Sbjct: 628 ISLEPENTLESLSVQALTAP--PNSLCIMSMKDGNIETFYLHIGLFNGVYLRSVLELSTG 685
Query: 438 RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKL 482
+L D + LG++P L + + +V A S RP + Y N L
Sbjct: 686 QLKDTRTRFLGSRPVKLFSVTIQNQLSVIALSSRPWLSYIINASL 730
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 10/209 (4%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRI 1064
I+D + +IL +L E A S+ F ++ + +G+ ++ P+ I
Sbjct: 848 ILDPLSKKILTRIELDDNEAAFSIAMVTFKNQNDEIFLAIGSGKNVILAPKSFSAAYISI 907
Query: 1065 IIFHYDDGKLQQIAEK-EIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHF 1122
F D GK ++ K E+ ++ F G+LLA + +R++E +K LR E
Sbjct: 908 YRF-IDQGKSIELVHKTEVDDIPLALLGFQGRLLAGLGKMLRIYEMGMKKCLRKCEVRAV 966
Query: 1123 NNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFL 1182
N I L +G I++ D+ S+ YK +E + D P W T+ +LD E
Sbjct: 967 PNCIVQ-LHTQGSRIIIADIQESIHFAVYKYLENRLIVFADDVIPRWTTTSTMLDYETVA 1025
Query: 1183 GAENSYNLFI--CQKDSAATSDEDRTHLQ 1209
+ N +I C + + ++DED + Q
Sbjct: 1026 AGDKFGNFWINRCPLEVSESADEDPSGAQ 1054
>gi|212531303|ref|XP_002145808.1| nuclear mRNA splicing factor, putative [Talaromyces marneffei ATCC
18224]
gi|210071172|gb|EEA25261.1| nuclear mRNA splicing factor, putative [Talaromyces marneffei ATCC
18224]
Length = 1209
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 176/437 (40%), Gaps = 51/437 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF L ++ E +G T VK K++ + I L L +G +FV S
Sbjct: 306 FLLQTEDGDLFKLTIDMVEDENGQLTGEVKRLKIKYFDTVPIAANLLILKSGFLFVASET 365
Query: 140 GDSQLVKLNRSPDE-------------------NGTY--------VSVMESFTNLAPIID 172
G+ + + D+ N Y ++++ES +L PI+D
Sbjct: 366 GNHHFYQFEKLGDDDEETEFSSDDVSADPADPINPVYFNLRGAENLNLVESINSLNPIMD 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+ D + Q+ T G + R +++G+ + E +LP + +W +
Sbjct: 426 CKITDAIGEDAPQIYTICGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D +VLSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 FDAYIVLSFTNGTLVLSI-GETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPKGIRHIL 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P ++I + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADH--RVNEWPAPQHRTIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLGG 400
V L + E ++ AVG D + R+LSL S++ + P
Sbjct: 603 VTSLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
I+ I T YL + L G LD +G L+D + LG +P L
Sbjct: 657 NIMSM-IDSTSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFGVSVK 715
Query: 461 STTNVFACSDRPTVIYS 477
V A S RP + YS
Sbjct: 716 GQPAVLALSSRPWLGYS 732
Score = 66.6 bits (161), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 8/199 (4%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N +L +L E A+S+ + F +D T+ V+GT V +P I F
Sbjct: 864 NAKSVLSRLELEENESAVSIAAVSFASQDNETFLVVGTGKDVVTYPRSFSAGFIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIA 1127
D +L+ I + +I+ ++ F G+L+A I +R+++ ++ LR + N+I
Sbjct: 924 EDGRELEFIHKTKIEEPPLALLAFQGRLVAGIGKNLRIYDLGMKQMLRKCQVEAVPNLI- 982
Query: 1128 LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENS 1187
+ L+ +G I+V D+ S+T + YK E D W T+ ++D E G +
Sbjct: 983 VGLQTQGSRIIVSDVQESVTYVVYKYQENQLIPFVDDVIARWTTATTMVDYETTAGGDKF 1042
Query: 1188 YNLFI--CQKDSAATSDED 1204
NL++ C + ++ SDED
Sbjct: 1043 GNLWLVRCPQKASDDSDED 1061
>gi|402077250|gb|EJT72599.1| pre-mRNA-splicing factor RSE1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1216
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 183/459 (39%), Gaps = 64/459 (13%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E +G T V+ K++ I
Sbjct: 297 MHKLKG--SAGAFF------FLLQTEDGDLFKVTIDMLEDAEGNTTGEVQRLKIKYFDTI 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNR------------------------------ 149
+ L L +G +FV S G+ + +
Sbjct: 349 PVSSNLCILKSGFLFVASEFGNHHFYQFEKLGDDDEELEFSSENFPSDPAEPYEPAYFYP 408
Query: 150 SPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEE 209
P EN ++++ES ++ P++D+ V +L + Q+ T SG + R++++G+ + E
Sbjct: 409 RPTEN---LALVESVESMNPLMDLKVANLTDEDAPQIYTVSGNGARSTFRMLKHGLEVNE 465
Query: 210 HACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQT 268
LPG +W I D+ +VLSF T VL++ G VEE GF S T
Sbjct: 466 IVASQLPGTPSAVWTTKIARDDQYDSYIVLSFTNGTLVLSI-GETVEEVSDTGFLSSVST 524
Query: 269 FYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCD 326
+ ++QV P I + V+ W P +SI + N+ QV A +G
Sbjct: 525 LAVQQLGEDGLVQVHPRGIRHIRS---GVVNEWPTPQHRSIVAAATNERQVAVALSSGEI 581
Query: 327 VYY-LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLL 385
VY+ ++ GS + + + V L + E ++ AVG D + R+L
Sbjct: 582 VYFEMDTDGSLAEYDERKEMSGTVTSLSLG-----EVPEGRLRSSFLAVGC-DDCTVRIL 635
Query: 386 SL-PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPASGR 438
SL P K P ++ + E YL + L G LD +G
Sbjct: 636 SLDPETTLESKSVQALTAAPSALSIMAMEDSSSGGTTLYLHIGLNSGVYLRTVLDEVTGE 695
Query: 439 LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYS 477
LTD ++ LG + L T V A S R + YS
Sbjct: 696 LTDTRQKFLGPKAVRLFQVSVQGMTCVLALSSRSWLGYS 734
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 1039 EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFN 1093
+D ++ V+GT V++P +G I ++ + +DG+ L+ I + +++ ++ F
Sbjct: 898 QDSESFLVVGTGKDMVLNPRCF--TEGYIHVYRFLEDGRELEFIHKTKVEEPPMALLAFQ 955
Query: 1094 GKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT 1153
GKL+A + ++R+++ + LR S + + L+ +G I+VGD L + YK
Sbjct: 956 GKLVAGVGRSLRIYDLGLRQLLRKAQSEVAPRVIVSLQTQGSRIVVGDSQHGLIYVAYKQ 1015
Query: 1154 MEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGT 1213
+ D W T ++D E G + N++I + A+ + D Q
Sbjct: 1016 EANKLIAFADDSIQRWTTCSTMVDYESTAGGDKFGNIWILRCPEKASQEAD----QPGSE 1071
Query: 1214 VHLV 1217
VHL+
Sbjct: 1072 VHLM 1075
>gi|225441567|ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
Length = 1387
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 132/288 (45%), Gaps = 37/288 (12%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVEL---LGEISIPECLTYLDNGVVFVGSRLGDSQLV 145
G LFM+ + +F PKV L L + L + G + +GD ++
Sbjct: 396 GELFMIEI--------SFDSDGPKVNLSDCLYRGLSCKALLWFAGGFLAALVEMGDGMVL 447
Query: 146 KLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGI 205
KL E G V N+API+DM VVD + Q+ C G EGSLRIIR+GI
Sbjct: 448 KL-----EQGRLV-YRSPIQNIAPILDMSVVDCHDEEHDQMFACCGVTPEGSLRIIRSGI 501
Query: 206 GIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFT 263
+E+ GI G W + + + + LVLSFV TRVL++ + + T+ GF
Sbjct: 502 SVEKLLRTAPIYQGITGTWTVKMKVIDSYHSFLVLSFVEETRVLSVGLSFTDVTDSVGFQ 561
Query: 264 SDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR----------VSSWEPPNGKSISVVS 313
D T CG VD ++Q+ + L + A +SW P N SIS+ +
Sbjct: 562 PDVSTLACGVVDDGLLVQIHKNGVKLCLPTTVAHPEGIPLASPICTSWFPEN-ISISLGA 620
Query: 314 CNKNQVLCATG--CDVYYLEV-----HGSEIKQLAHRALEYEVACLDI 354
N ++ AT C ++ L V + EI ++ H L+ EV+C+ I
Sbjct: 621 VGYNLIVVATSSPCFLFILGVRSVSAYQYEIYEMQHVRLQNEVSCISI 668
Score = 45.8 bits (107), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 52/110 (47%)
Query: 447 LGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS 506
+G P L ++ A SDRP ++ S+ H L +++++ + H+ + + P
Sbjct: 821 IGITPVFLVPLSDSLEADIIALSDRPWLLQSARHSLSYTSISFQPSTHVTPVCSMECPMG 880
Query: 507 LALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRI 556
+ +++ + ++L+++ LG PR++ Y S+ V+ T +
Sbjct: 881 ILFVAENSLHLVEMVHSKRLNVQKFYLGGTPRKVLYHSESRLLLVMRTEL 930
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLRIIR+GI +E+ GI G W + + + + LVLSFV TRVL++
Sbjct: 491 EGSLRIIRSGISVEKLLRTAPIYQGITGTWTVKMKVIDSYHSFLVLSFVEETRVLSV 547
>gi|258570355|ref|XP_002543981.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
gi|237904251|gb|EEP78652.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
Length = 1209
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 199/513 (38%), Gaps = 52/513 (10%)
Query: 83 LLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
LL G LF + ++ E +G T V+ K++ + I L L NG +FV S G
Sbjct: 307 LLQTEDGDLFKVTIDMVEDDNGQPTGEVRRLKLKYFDTVPIASSLCILKNGFLFVASENG 366
Query: 141 DSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIIDM 173
+ + + D++ ++++ES ++ P++
Sbjct: 367 NHHFYQFEKLGDDDEETEFTSDDFSSDPLEPLAPVYFRPRPAENLNLVESINSVNPLMSC 426
Query: 174 VVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNL 232
V +L QL T G + R +++G+ + E +LP + +W +
Sbjct: 427 KVANLTEDDAPQLYTLCGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQY 486
Query: 233 DNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 487 DAYIILSFTNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHA 545
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYEV 349
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R + V
Sbjct: 546 DR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTV 603
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPRS 406
CL + E ++ AVG D + R+LSL +LE + L S
Sbjct: 604 TCLSLG-----EILPGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALS 657
Query: 407 ILM----TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLST 462
I+ T YL + L G LD +G L+D + LG +P L +
Sbjct: 658 IMSMIDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFSVSVKEQ 717
Query: 463 TNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTFGTI 520
V A S RP + YS F L V S N +E + + +I
Sbjct: 718 RAVLALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSI 777
Query: 521 DEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
+++ L T+PL PR F VI
Sbjct: 778 EKLDNNLLQETIPLAYTPRHFVRHPEHPLFYVI 810
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 97/198 (48%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N+ +L +L E A+S+ + F +D T+ V+GT VV+P + I F
Sbjct: 864 NSKTVLSRIELEENEAAVSVAAVPFSSQDDETFLVVGTGKDMVVNPPSSSCGYIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
D +L+ I + +++ ++ F G+LLA I + +R+++ ++ LR + + +
Sbjct: 924 EDGKELEFIHKTKVESPPQALLAFQGRLLAGIGTNLRIYDLGMKQLLRKCQAEVVPRMIV 983
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK E + D W T ++D E G +
Sbjct: 984 GLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDIIARWTTCTTMVDYETVAGGDKFG 1043
Query: 1189 NLFI--CQKDSAATSDED 1204
NL++ C + ++ +DED
Sbjct: 1044 NLWLLRCPQKASEEADED 1061
>gi|358253751|dbj|GAA53701.1| splicing factor 3B subunit 3, partial [Clonorchis sinensis]
Length = 726
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 145/336 (43%), Gaps = 42/336 (12%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE ++ M V E K++ + + + L G +FV S G+ L ++
Sbjct: 311 GDIFKINLEVDDDM-----VTEIKLKYFDTLPVASAMCVLKTGFLFVASEFGNHSLYQIA 365
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
D+ + S M + NL+PI+ + D + Q
Sbjct: 366 HLGDDDDEPEFSSAMPLEEGDTFYFAPRALKNLIEVDVLENLSPIMHYHIADFANEDTPQ 425
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G + R++R+G+ + E A DLPG +W + S + D +++SFV T
Sbjct: 426 LAVLCGRGPGSTFRLLRHGLEVSEMAKSDLPGNPNAVWTVKRNSEEEYDAYIIVSFVNAT 485
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
VL++ G VEE GF T C + ++QV P I + RV+ W P
Sbjct: 486 LVLSI-GETVEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHIRADK--RVNVWRAP 542
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEE 361
K I + N+ QV+ A TG ++ Y E+ G + + + +V C+ + + E
Sbjct: 543 GKKMIVRCAVNRRQVVIALTGGELVYFEMDMTGQLNEYTERKEMPADVICMALGRIPTSE 602
Query: 362 TSSEPAKAQLAAVGLWTDISARLLSL-PSLEEVCKE 396
+++ AVGL D + R+LSL PS+ V E
Sbjct: 603 Q-----RSRFLAVGL-ADNTVRILSLDPSVSRVSCE 632
>gi|388855100|emb|CCF51231.1| probable splicing factor 3B subunit 3 [Ustilago hordei]
Length = 1221
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 114/508 (22%), Positives = 209/508 (41%), Gaps = 64/508 (12%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G LF + +E ++ ++ K++ + + L L +G +FV S G L
Sbjct: 319 GDLFKITMEHQDD-----EIRSLKIKYFDTVPVASGLAILRSGFLFVASEFGPQLLYSFQ 373
Query: 149 RSPDENG--TYVSV-------------MESFT--------------NLAPIIDMVVVDLE 179
+ D++ Y+S + +FT +L PI+D ++
Sbjct: 374 KLGDDDDLPEYISTDYDENGAGRKRPQLPTFTPRSLDNLVQVDEMPSLDPILDAKPLNPL 433
Query: 180 RQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVL 238
Q+ G S +++R+G+ +E DLPG+ +W I D+ ++L
Sbjct: 434 ASDSPQIFVACGRGARSSFKMLRHGLEAQEAVSSDLPGVPSAVWTTKITRQDEYDSYIIL 493
Query: 239 SFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARV 298
SF+ T VL++ G +EE GF + T + +LQV P I + + V
Sbjct: 494 SFLNGTLVLSI-GETIEEVGDSGFLTSSPTLAVQQLGEDALLQVHPYGIRHILVDKQ--V 550
Query: 299 SSWEPP---NGKSISVVS--CNKNQVLCATGCD--VYY-LEVHGSEIKQLAHRALEYEVA 350
+ W P NG ++V+ N+ QV A + VY+ L++ G + +A V
Sbjct: 551 NEWATPSLPNGVQTTIVAICTNERQVAVALSSNELVYFELDMDGQLNEYQDRKATGATVL 610
Query: 351 CLDIS--PLSNEETSSEPAKAQLAAVGLWT--------DISARLLSLPSLEEVCKEPLGG 400
+ ++ P + T A + V + + IS + L+ P+ +C +
Sbjct: 611 TMSMADCPEGRQRTPYLAAGCDDSTVRIISLEPASTLASISIQALTAPA-SSICVAEMKD 669
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
+ R+ + ++ + L +G + LD +G+LTD + LG++ L +
Sbjct: 670 ATVDRN------QATTFVNIGLSNGVLLRTVLDAMTGQLTDTRTRFLGSKAVRLIRTKVH 723
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTI 520
+ V A S R + ++ +L F+ + ++H S +AE P+ L ST TI
Sbjct: 724 GQSAVMALSTRTWLSFTYQSRLQFTPLIFDALDHAWSFSAELCPEGLIGIVGSTLRIFTI 783
Query: 521 DEI-QKLHIRTVPLGEAPRRIAYQESSQ 547
+ KL +V L PR+IA+ Q
Sbjct: 784 PSLASKLKQDSVALSYTPRKIAHHPDEQ 811
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 13/227 (5%)
Query: 994 QPADFNM-EVEVHN----LLIIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVL 1047
+PA+F + E N + ++D + H +L E A S+ F + ++ V+
Sbjct: 851 KPAEFGLIRGEAGNWASCVRVVDGPQSQTTHKIELDDNEAAFSVAIVPFASAEKQSFLVV 910
Query: 1048 GTAV-VHPEENEPKQGRIIIFHYDDG--KLQQIAEKEIKGACYSMCEFNGKLLASINSTV 1104
G+AV V K+ + + +G +L+ + EI + F G+LLA + +
Sbjct: 911 GSAVDVVLSPRSFKKAYLTTYRLINGGRELEVHHKTEIDDIPLVLRPFQGRLLAGVGKAL 970
Query: 1105 RLFEWTNEKELRLECSHFNNIIALF-LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISR 1163
R+++ +K LR +C + + A+ L +G I+VGD+ S+ YK +E +
Sbjct: 971 RIYDLGKKKLLR-KCENKSFPTAIVSLDAQGSRIVVGDMQESIVFTSYKPLENRLVTFAD 1029
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQ--KDSAATSDEDRTHL 1208
D P ++T +LD + A+ NL++ + D++ + DED T +
Sbjct: 1030 DVMPKFVTRCTMLDYDTVAAADKFGNLYVLRIDADTSRSVDEDPTGM 1076
>gi|147787360|emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]
Length = 1143
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 121/504 (24%), Positives = 203/504 (40%), Gaps = 57/504 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE E + E K++ I + + L +G +F S G+
Sbjct: 279 FLLQTEYGDVFKVTLEHEND-----RISELKIKYFDTIPVTSSMCVLKSGFLFAASEFGN 333
Query: 142 S---QLVKLNRSPDENGTYVSVMES----------------------FTNLAPIIDMVVV 176
Q + D + S+ME+ +L PI+DM V
Sbjct: 334 HGLYQFQAIGDDADVESSSASLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPIMDMKVS 393
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNT 235
+L + Q+ G S+RI+R G+ I E A LPG+ +W + D
Sbjct: 394 NLFEEETPQIFALCGRGPRSSIRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAY 453
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+V+SF T VL++ G VEE GF + + +++QV PS I +
Sbjct: 454 IVVSFANATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED-- 510
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVACLD- 353
R++ W P ++I V N+ QV+ A +G ++ Y EV + QL R+ V D
Sbjct: 511 GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMT--GQLMERSRFLAVGSYDN 568
Query: 354 -ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF 412
I LS + Q+ +V + LL L V E G P S+
Sbjct: 569 TIRILSLDPDDC----MQILSVQSVSSPPESLLFLEVQASVGGE--DGADHPASL----- 617
Query: 413 EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRP 472
+L L +G +F +D +G+L+D + LG + L + + S RP
Sbjct: 618 ----FLNAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVIVRGRRAMLCLSSRP 673
Query: 473 TVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDSTFTFGTIDEIQKLHIRTV 531
+ Y + + ++ + S +++ + +A+A D+ F TI+ + + TV
Sbjct: 674 WLGYIHQGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRVF-TIERLGETFNETV 732
Query: 532 -PLGEAPRRIAYQESSQTFGVITT 554
PL PR+ Q + VI +
Sbjct: 733 IPLRYTPRKFVLQPKRKLLVVIES 756
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 13/213 (6%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLGTAVVHPEENEPKQ- 1061
V + I+D T +L E A S+ + F + + T +GTA + PK+
Sbjct: 819 VSCIRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYGTLLAVGTA--KSLQFWPKRS 876
Query: 1062 ---GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR 1116
G I I+ + +DGK L+ + + +++G ++C+F G+LLA I S +RL++ + LR
Sbjct: 877 FDAGYIHIYRFLEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKRRLLR 936
Query: 1117 -LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
E F N I + + D I VGD+ S +Y+ E + D P W+T+
Sbjct: 937 KCENKLFPNTI-VSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYH 995
Query: 1176 LDDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
+D + GA+ N++ + +D + +ED T
Sbjct: 996 IDFDTMAGADKFGNIYFVRLPQDVSDEVEEDPT 1028
>gi|156095699|ref|XP_001613884.1| Splicing factor 3B subunit 3 [Plasmodium vivax Sal-1]
gi|148802758|gb|EDL44157.1| Splicing factor 3B subunit 3, putative [Plasmodium vivax]
Length = 1230
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 208/501 (41%), Gaps = 73/501 (14%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G L+ + +E E DG VKE + + + + + +G +FV + G+ + +
Sbjct: 308 GDLYKIEMEHE---DGV--VKEITCKYFDTVPVANAICVMKSGSLFVAAEFGNHFFYQFS 362
Query: 149 RSPDENG-----------------------TYVSVMESFTNLAPIIDMVVVDLERQGQGQ 185
DE+ T + +++ +L+PI+DM V+D + Q
Sbjct: 363 GIGDEDNEAMCTSKHPSGRNAIIAFRTKKLTNLFLIDQVYSLSPILDMKVIDAKNASSPQ 422
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHT 244
+ G SLRI+++G+ IEE A +LPG K IW + + + D +++SF G T
Sbjct: 423 IYALCGRGPRSSLRILQHGLSIEELADNELPGRPKFIWTIKKDNASDYDGYIIVSFEGST 482
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
+L + G VEE ++ T + + +++QV + I+ + + W PP
Sbjct: 483 LILEI-GETVEEVVDSLLLTNVTTIHVNILYDNSLIQVHDAGIRHINGKV---IHEWVPP 538
Query: 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSE-IKQLAHRALEYEVACLDISPLSNEET 362
K I + N Q++ + +G ++ Y E+ S + + + L E CL I ++
Sbjct: 539 KNKQIKAATSNCAQIVISLSGGELLYFEIDESHTLVETFRKNLNVETLCLSI-----QQV 593
Query: 363 SSEPAKAQLAAVGLWTDISARLLS--------------LP---SLEEVCKEPLG--GEII 403
+A AVG ++ RLLS LP S +++C + G
Sbjct: 594 QENKLRANFLAVGCLDNV-VRLLSIEKEKYFNQLSTFILPNNSSAQDICITEMSELGNDK 652
Query: 404 PRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTT 463
R +L +L + L +G + +DP +G LT+ LG + +
Sbjct: 653 ERKLL--------FLNIGLNNGVLLRSVVDPITGTLTNHYSKYLGAKNVKICPVHVKKNA 704
Query: 464 NVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDST---FTFGTI 520
+ ++ + Y K ++S +N + + S ++E D + S+ F F +
Sbjct: 705 ALLVLCEKTYLCYVHQGKYIYSPLNYDILEYASSFHSEQCSDGYVAISGSSLRIFRFYRL 764
Query: 521 DEIQKLHIRTVPLGEAPRRIA 541
E+ +I + L PR+I
Sbjct: 765 GEVFSQNI--LHLTFTPRKIV 783
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 141/330 (42%), Gaps = 36/330 (10%)
Query: 879 VIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERY---LLGD 935
++P+P P S+ Y S +I + I A ++A+ Y L +
Sbjct: 782 IVPLPFP----------SLFYDHDTSL-----EIERQKNIRMLAIIEADHNSYDENTLSE 826
Query: 936 LAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPGSTKQSTANQP 995
+ L + L+ E+ G+ SV++ L E+ E L Y + G+ K
Sbjct: 827 IQRALKGIQLDGEDAQGGSASVQQ-----LRENGDAEEEEEEELLYDRIGTVKAGPGKWG 881
Query: 996 ADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPE 1055
+ + + NL ID+ + E+ E ALS+ + + E + V T + +
Sbjct: 882 SCIKI-IHPVNLQTIDKISLEM--------EEAALSVCACEL-EALHCLIVGTTTSLSLK 931
Query: 1056 ENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKE 1114
+ ++ YD + KL + ++ + C FNG+LLASI + +R++ +K+
Sbjct: 932 NRSAPAAALRVYTYDINYKLNLLHITPVEDQPFCFCPFNGRLLASIGNKLRIYAL-GKKK 990
Query: 1115 LRLECSHFNNIIALF-LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSI 1173
L +C + + A+ +KV GD I D+ S+ + Y + IS D P W+T
Sbjct: 991 LLKKCEYKDIPEAIISIKVSGDRIFASDIRESVLIFFYDANMNTLRLISDDIIPRWITCS 1050
Query: 1174 EILDDELFLGAENSYNLFICQKDSAATSDE 1203
EILD + A+ ++F+ + A +E
Sbjct: 1051 EILDHHTIMAADKFDSVFVLRVPEEAKQEE 1080
>gi|323508292|emb|CBQ68163.1| probable splicing factor 3B subunit 3 [Sporisorium reilianum SRZ2]
Length = 1221
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 113/515 (21%), Positives = 211/515 (40%), Gaps = 64/515 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G LF + +E ++ ++ K++ + + L L +G +FV S G
Sbjct: 312 FLVQSEDGDLFKVTMEHQDD-----EIRSLKIKYFDTVPVASGLAILRSGFLFVASEFGP 366
Query: 142 SQLVKLNRSPDEN---------------GTYVSVMESFT--------------NLAPIID 172
L + D++ G + +FT +L PI+D
Sbjct: 367 QLLYSFQKLGDDDDLPEYSSTDYDENGAGRRRPQLPTFTPRPLDNLVQVDEMPSLDPILD 426
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
++ Q+ G S +++R+G+ +E DLPG+ +W I
Sbjct: 427 AKPLNPLASDSPQIFAACGRGARSSFKMLRHGLEAQEAVSSDLPGVPSAVWTTKITRQDE 486
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D+ ++LSFV T VL++ G +EE GF + T + +LQV P I
Sbjct: 487 HDSYIILSFVNGTLVLSI-GETIEEVSDSGFLTSSSTLAVQQLGEDALLQVHPHGIRHIL 545
Query: 292 TESKARVSSWEPP---NGKSISVVSC--NKNQVLCATGCD--VYY-LEVHGSEIKQLAHR 343
+ + ++ W P NG+ ++V+ N+ QV+ A + VY+ L++ G + +
Sbjct: 546 VDKQ--INEWATPSLPNGRQTTIVATCTNERQVVVAFSSNELVYFELDMDGQLNEYQERK 603
Query: 344 ALEYEVACLDIS--PLSNEETSSEPAKAQLAAVGLWT--------DISARLLSLPSLEEV 393
A+ V + ++ P + T + V + + IS + L+ P+ +
Sbjct: 604 AMGAAVLTMSMADCPEGRQRTPYLAVGCDDSTVRIISLEPNSTLASISIQALTAPA-SSI 662
Query: 394 CKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTV 453
C + I R+ T ++ + L +G + LD +G+LTD + LG++
Sbjct: 663 CMAEMHDATIDRNHATT------FVNIGLQNGVLLRTVLDAVTGQLTDTRTRFLGSKAVR 716
Query: 454 LKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDS 513
L + + V A S R + ++ +L F + ++H S +AE P+ L S
Sbjct: 717 LIRTKVHGQSAVMALSTRTWLSFTYQDRLQFVPLIFDALDHAWSFSAELCPEGLIGIVGS 776
Query: 514 TFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQ 547
T T+ + KL +V L PR+ A+ + Q
Sbjct: 777 TLRIFTMPSLASKLKQDSVALSYTPRKFAHHPNEQ 811
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%), Gaps = 13/226 (5%)
Query: 995 PADFNM-EVEVHN----LLIIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLG 1048
PA+F + E N + ++D + H +L E A S+ F + V+G
Sbjct: 852 PAEFGLIRAEAGNWASCVRVVDGVQSQTTHKLELDDNEAAFSVAVVPFASAEKEAMLVVG 911
Query: 1049 TAV-VHPEENEPKQGRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVR 1105
+AV V K+ + + ++G+ L+ + + E+ + F G+LLA I +R
Sbjct: 912 SAVDVVLSPRSFKKAYLTTYRLTNNGRELEVLHKTEVDDIPLVLRPFQGRLLAGIGKALR 971
Query: 1106 LFEWTNEKELRLECSHFNNIIALF-LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRD 1164
+++ +K LR +C + + A+ L +G I+VGD+ S+ YK +E + D
Sbjct: 972 IYDLGKKKLLR-KCENKSFATAIVSLDAQGSRIVVGDMQESIIFTSYKPLENRLVTFADD 1030
Query: 1165 YNPNWMTSIEILDDELFLGAENSYNLFICQ--KDSAATSDEDRTHL 1208
P ++T +LD + A+ N+++ + D++ + DED T +
Sbjct: 1031 VMPKFVTRCAMLDYDTVAAADKFGNVYVLRIDADTSRSVDEDPTGM 1076
>gi|300120114|emb|CBK19668.2| unnamed protein product [Blastocystis hominis]
Length = 1240
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 180/406 (44%), Gaps = 38/406 (9%)
Query: 156 TYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDL 215
T + +++ +L+P++ + DL G QL G L++++ G+ I + L
Sbjct: 411 TNLRPVDTLPSLSPLVKIHAEDLRGDGTPQLFALCGRSSRSQLKVLQQGLAISLLSQNPL 470
Query: 216 P-GIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV 274
P G+W L + +V+SF T VL + G VE+ GF D+ T G +
Sbjct: 471 PYAPSGLWTLR-DARTGQHRFMVISFNNATIVLAV-GKSVEQVMDTGFKLDESTLATGVL 528
Query: 275 DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLE-- 331
+ + LQV P I + +V WEPP+ +SI+ + N Q++ A + +V Y E
Sbjct: 529 EGNSFLQVYPGGFRQIFEDGHTKV--WEPPSRRSITAAAMNLRQIVVALSNGEVLYFELD 586
Query: 332 --VHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS 389
+ E + + HR EV CLD+ L+ +A AVG + D S R+ SL
Sbjct: 587 ERLEWVERESMNHRE---EVICLDLPALAPNSL-----RAPFLAVG-YGDRSCRVYSLAP 637
Query: 390 ---LEEVCKEPLGGEIIPRSILMTCF--------EGHCYLLVALGDGSMFYFSLDPASGR 438
LEE+ + L +P ++ + L V + +G + +DP SG+
Sbjct: 638 NSLLEELSMQALNA--MPSNLTLDTMRMGSGSLARETLLLTVGMENGILMRVEVDPVSGK 695
Query: 439 LTDKKKVT-LGTQPTVLKTFRSLSTTN--VFACSDRPTVIYSSNHKLVFSNVNLRQVNHM 495
L++ + LG +P ++ F+ L+ N V A S +P + Y +N+ L +++ ++
Sbjct: 696 LSNARSTRFLGPRP--VRLFKILAGGNPCVLALSVKPWLCYCANNTLTLTSLVSDPLDLA 753
Query: 496 CSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRI 540
E + + + ID++ Q ++PL PR +
Sbjct: 754 APFCNEDCSEGIVCVAGTNLNIIRIDDLTQPFTATSIPLSYTPREL 799
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKF---GEDPNTYFVLGTAV---VHPEENEPKQG 1062
++D + + L +L E A S+ +F G++P + V+GTA +HP QG
Sbjct: 857 VVDAISLQTLERLELADNEAAFSMCVCRFASKGDEP--FVVIGTAKNLKIHPRSC--SQG 912
Query: 1063 RIIIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSH 1121
I +F + +G LQ + E+ ++CEF+GKL A I +VR+++ +K LR +C
Sbjct: 913 FISVFRFVEGHSLQLLHRTEVDEVPAALCEFDGKLAAGIGRSVRVYDLGKKKLLR-KCE- 970
Query: 1122 FNNIIALF---LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
N + F L+ G+ + GDL +++ ++++ E + P +T++++LD
Sbjct: 971 -NKAMPHFVTKLRAMGERLYAGDLTDNVSFVKFRKGTNQLVEFADGGIPRSITALDVLDY 1029
Query: 1179 ELFLGAENSYNLFICQKDSAATSD 1202
+ + NLF+ + D D
Sbjct: 1030 NTVVCGDKGGNLFVERVDPKVDDD 1053
>gi|325189950|emb|CCA24429.1| splicing factor putative [Albugo laibachii Nc14]
Length = 1644
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 176/431 (40%), Gaps = 42/431 (9%)
Query: 158 VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG 217
++++ + +++PI ++V D + QL G SLRI+R+G+ + E A LPG
Sbjct: 838 LAMISNIPSISPITQLLVDDFANEQTPQLYALCGQGNRSSLRILRHGLPVMEMAASALPG 897
Query: 218 I-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDP 276
+ K +W L D +V+SF T VL + G VEE G D + ++
Sbjct: 898 VAKAVWCLKESFTDTCDKYIVVSFEDATLVLEI-GDTVEEITDSGLLRDHSSLLVALLED 956
Query: 277 RTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ-VLCATGCDVYYLEVHGS 335
++LQV + I V+ W+ P K I + N Q V+ G +V Y E+ +
Sbjct: 957 NSMLQVHQNGFRHIRKSQP--VTEWKAPGKKIIERCAANARQLVVSLAGGEVIYFELGVN 1014
Query: 336 EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL-PSLEEVC 394
E+ + L +E+ LD+ + + AVG W D S R+LSL P+
Sbjct: 1015 ELMEKGKLDLGFEITSLDVGQVPQGRQ-----RFPFLAVGSW-DNSVRVLSLDPNDLFRQ 1068
Query: 395 KEPLGGEIIPRSILMTCFEG-------------HC-YLLVALGDGSMFYFSLDPASGRLT 440
K L P ++ CF C +L + L +G +D + L
Sbjct: 1069 KSTLALTSHPHTL---CFSNLQTESAAGSDHTTQCLFLNIGLHNGVFQQTRMDSITAALA 1125
Query: 441 DKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500
D LGT+P L + A S R + Y + ++ +++ S +
Sbjct: 1126 DSSARFLGTKPVKLFCVTIQGKRAILALSSRAWLSYFYQTRRQLMPLSTEMLHYASSFQS 1185
Query: 501 ESYPDSLALATDSTFTFGTIDEI------QKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
E P+ LA T T+D + QK +R PRR+ S+ ++ +
Sbjct: 1186 EQCPEGLAALTSEGMKILTLDHLGDTFNQQKCFLRYT-----PRRMVLHPPSRRLIIVES 1240
Query: 555 RIDIQEADGST 565
D EA+ ++
Sbjct: 1241 --DYGEANAAS 1249
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAV----VHPEENEPKQGRI 1064
I D T E + H+L E+ S+ + F + FV+ +V +HP + P+ G +
Sbjct: 1297 IFDPITCETIACHELEDNEHTRSITTCVFHDRGGEVFVIIGSVKNLRLHPISS-PEGGLL 1355
Query: 1065 IIFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN 1123
++ +G +L + + G Y+M EF G+LL S+ +R+++ K LR + +
Sbjct: 1356 RVYRVVEGSQLVLVHTTPVDGIPYAMIEFQGRLLVSVGKVLRIYDLGKRKLLRKCENRYF 1415
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
+ LK GD I D+ S+ ++YK + + D P++MTS +LD + G
Sbjct: 1416 TSPMIDLKSAGDRIYASDVHESIHFVKYKAEDNQLITFADDCVPHFMTSSTLLDYDTIAG 1475
Query: 1184 AENSYNLFICQKDSAATSDE 1203
+ N+F+ + A SDE
Sbjct: 1476 GDKFGNVFVTRL-PAEVSDE 1494
>gi|303324325|ref|XP_003072150.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111860|gb|EER30005.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 1209
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 198/513 (38%), Gaps = 52/513 (10%)
Query: 83 LLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
LL G LF + ++ E +G T V+ K++ + + L L NG +FV S G
Sbjct: 307 LLQTEDGDLFKVTMDMVEDENGQLTGEVQRLKLKYFDTVPVASSLCILKNGFLFVASETG 366
Query: 141 DSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIIDM 173
+ + + D++ ++++ES +L P++
Sbjct: 367 NHHFYQFEKLGDDDEETEFSSDDFSADPSEPLAPVYFRPRPAENLNLVESINSLNPLMSC 426
Query: 174 VVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNL 232
+ +L Q T SG + R +++G+ + E +LP + +W +
Sbjct: 427 KITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQY 486
Query: 233 DNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 487 DAYIILSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHA 545
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYEV 349
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R + V
Sbjct: 546 DR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTV 603
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPRS 406
CL + E ++ AVG D + R+LSL +LE + L S
Sbjct: 604 TCLSLG-----EVPPGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALS 657
Query: 407 ILM----TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLST 462
I+ T YL + L G LD +G L+D + LG + L +
Sbjct: 658 IMSMVDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKSVKLFSVSVKEQ 717
Query: 463 TNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTFGTI 520
V A S RP + YS F L V S N +E + + +I
Sbjct: 718 RAVLALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSI 777
Query: 521 DEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
+++ L T+PL PR F VI
Sbjct: 778 EKLDNNLLQETIPLAYTPRHFVRHPEQPLFYVI 810
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N+ ++ +L E A+S+ + F +D T+ V+GT VV+P + I F
Sbjct: 864 NSKAVISRIELEENEAAVSVAAVPFSSQDDETFLVVGTGKDMVVYPPSSSCGFIHIYRFQ 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
D +L+ I + +++ +++ F G+LLA I +R+++ ++ LR + + +
Sbjct: 924 EDGKELEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEVVPRLIV 983
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK E + D W T ++D E G +
Sbjct: 984 GLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGDKFG 1043
Query: 1189 NLFI--CQKDSAATSDED 1204
NL++ C + ++ +DED
Sbjct: 1044 NLWLLRCPQKASEEADED 1061
>gi|320037168|gb|EFW19106.1| pre-mRNA-splicing factor rse1 [Coccidioides posadasii str.
Silveira]
Length = 970
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 198/513 (38%), Gaps = 52/513 (10%)
Query: 83 LLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
LL G LF + ++ E +G T V+ K++ + + L L NG +FV S G
Sbjct: 68 LLQTEDGDLFKVTMDMVEDENGQLTGEVQRLKLKYFDTVPVASSLCILKNGFLFVASETG 127
Query: 141 DSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIIDM 173
+ + + D++ ++++ES +L P++
Sbjct: 128 NHHFYQFEKLGDDDEETEFSSDDFSADPSEPLAPVYFRPRPAENLNLVESINSLNPLMSC 187
Query: 174 VVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNL 232
+ +L Q T SG + R +++G+ + E +LP + +W +
Sbjct: 188 KITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQY 247
Query: 233 DNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
D ++LSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 248 DAYIILSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHA 306
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYEV 349
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R + V
Sbjct: 307 DR--RVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTV 364
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPRS 406
CL + E ++ AVG D + R+LSL +LE + L S
Sbjct: 365 TCLSLG-----EIPPGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALS 418
Query: 407 ILM----TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLST 462
I+ T YL + L G LD +G L+D + LG + L +
Sbjct: 419 IMSMVDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKSVKLFSVSVKEQ 478
Query: 463 TNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTFGTI 520
V A S RP + YS F L V S N +E + + +I
Sbjct: 479 RAVLALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSI 538
Query: 521 DEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
+++ L T+PL PR F VI
Sbjct: 539 EKLDNNLLQETIPLAYTPRHFVRHPEQPLFYVI 571
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
N+ ++ +L E A+S+ + F +D T+ V+GT VV+P + I F
Sbjct: 625 NSKAVISRIELEENEAAVSVAAVPFSSQDDETFLVVGTGKDMVVYPPSSSCGFIHIYRFQ 684
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
D +L+ I + +++ +++ F G+LLA I +R+++ ++ LR + + +
Sbjct: 685 EDGKELEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEVVPRLIV 744
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK E + D W T ++D E G +
Sbjct: 745 GLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGDKFG 804
Query: 1189 NLFI--CQKDSAATSDED 1204
NL++ C + ++ +DED
Sbjct: 805 NLWLLRCPQKASEEADED 822
>gi|213405251|ref|XP_002173397.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
yFS275]
gi|212001444|gb|EEB07104.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
yFS275]
Length = 1166
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 201/505 (39%), Gaps = 66/505 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
YLL + G L L +E +D VKE +++ I L L +G++F G G+
Sbjct: 306 YLLQNSDGDLLKLTME----LDDHSQVKELRIKYFDTIPFAAILNILKSGLLFAGCEGGN 361
Query: 142 SQLVKL---------------NRSPDENG------TY-------VSVMESFTNLAPIIDM 173
L + N S +++ TY +S+++ +L P+ D
Sbjct: 362 HHLYQFESLAIDDDEPEFSSANFSEEQSKHSPKKLTYKLHPLQNISLLDEIPSLFPLTDA 421
Query: 174 VVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK-GIWALSIGSPKNL 232
+V QL T G KE SLR+++ G+ E +LPG IW +
Sbjct: 422 IVTRTSTDANSQLYTLCGRHKEASLRLLKRGVSATEVVLSELPGAPIAIWTVKQKLNDPY 481
Query: 233 DNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
D +VLSF T VL++ G VEE G S T + +V+Q+ IS
Sbjct: 482 DKYMVLSFTNGTLVLSI-GETVEEVLDSGLLSSVSTLNVRQLGRSSVVQIHSKGIRCIS- 539
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD-VYYLEV---HGSEIKQLAHRALEYE 348
+ V+ W+ P I+ + N+ Q++ + D + Y E+ +G + + L
Sbjct: 540 -ANKEVTEWKTPADTVITNSAINEQQIVVSLSNDELAYFEMDDEYGQLNEYQERKLLTSP 598
Query: 349 VACLDISPLSNEET-------SSEPAKAQLAAVGLWT---DISARLLSLP--SLEEVCKE 396
V L + P+ +SE + ++ ++ +T ++S + LS P SL V E
Sbjct: 599 VTALALGPVPQGSKRSNFLCLASEDSTVRIVSLDPYTTLENLSVQALSAPASSLCMVNME 658
Query: 397 PLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKT 456
G E + YL + L +G +D SG+L D + LG +P L
Sbjct: 659 VTGYETL-------------YLHIGLSNGVYLRTVVDVTSGQLIDTRTRFLGPRPIRLSP 705
Query: 457 FRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFT 516
+V A ++R + YS+ L S + + + S + P+ + +
Sbjct: 706 IIVRGKQSVLAIANRSYLSYSNEQTLQVSPLLYSPLEYADSFASHQCPEGIVGIHQNILK 765
Query: 517 FGTIDEIQ-KLHIRTVPLGEAPRRI 540
T++ L PL P+R+
Sbjct: 766 IFTVEATHDDLKQDVFPLSCTPKRV 790
Score = 47.4 bits (111), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 11/224 (4%)
Query: 989 QSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLG 1048
QS + P N + V L I D N +++ L E + L + F + V
Sbjct: 803 QSERHCPNSTNEWITV--LSIFDMNEKKMIEG--LTFNEASFDLCYAFFRSRNEGFLVCS 858
Query: 1049 TAVVHP-EENEPKQGRIIIFHYDDG--KLQQIAEKEIKGACYSMCEFNGKLLASINSTVR 1105
+A+ + + G + ++ +DG L+ I+E E + F+G+L+A + +R
Sbjct: 859 SAINYDISKQSCSNGVLRVYSLNDGGLSLKCISETETDSFARVLKPFHGRLIAGVGPFLR 918
Query: 1106 LFEWTNEKELRL-ECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRD 1164
+++ N+K LR E N I ++ +G I+V D S + +K + + + D
Sbjct: 919 VYDLGNKKLLRKSEVRAVPNFITT-IQTQGYRIIVTDAQHSAFFVVFKPEDNRYIVFADD 977
Query: 1165 YNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAATSDEDRT 1206
W T+ ++D + +G + NL++ C + + +DE+ +
Sbjct: 978 CVARWATATAMVDYDTVVGGDKFSNLWLLRCPESVSQLADEENS 1021
>gi|6671952|gb|AAF23212.1|AC016795_25 hypothetical protein [Arabidopsis thaliana]
gi|10998135|dbj|BAB03106.1| unnamed protein product [Arabidopsis thaliana]
Length = 1331
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 136/567 (23%), Positives = 225/567 (39%), Gaps = 127/567 (22%)
Query: 118 EISIPECL---------TYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLA 168
++++ ECL +++ G + + + D + KL + M S N+A
Sbjct: 389 KVNLSECLYKGLPCKDILWIEGGFLATFAEMADGTVFKLGTEK------LHWMSSIQNIA 442
Query: 169 PIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEE--HACIDLPGIKGIWALSI 226
PI+D V+D + + + Q+ C G EGSLRIIR+GI +E+ GI G W + +
Sbjct: 443 PILDFSVMDDQNEKRDQIFACCGVTPEGSLRIIRSGINVEKLLKTAPVYQGITGTWTVKM 502
Query: 227 GSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSA 286
+ LVLSFV TRVL++ + + T+ GF SD TF CG V ++Q+ A
Sbjct: 503 KLTDVYHSFLVLSFVEETRVLSVGLSFKDVTDSVGFQSDVCTFACGLVADGLLVQIHQDA 562
Query: 287 AILISTESKAR----------VSSWEPPNGKSISVVSCNKNQVLCATG--CDVYYLEVHG 334
L A SSW P N SIS+ + +N ++ +T C + L V
Sbjct: 563 IRLCMPTMDAHSDGIPVSSPFFSSWFPEN-VSISLGAVGQNLIVVSTSNPCFLSILGVKS 621
Query: 335 -----SEIKQLAHRALEYEVACL-------------DISPLSNEETSSEPA--------- 367
EI ++ L+YEV+C+ D SP N ++ P+
Sbjct: 622 VSSQCCEIYEIQRVTLQYEVSCISVPQKHIGKKRSRDSSP-DNFCKAAIPSAMEQGYTFL 680
Query: 368 ----KAQLAAVGLWTD-ISARLLS--LPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLV 420
K + + D + R+L+ L SL + G IP+ + + + Y+L
Sbjct: 681 IGTHKPSVEVLSFTEDGVGVRVLASGLVSLTNTMGTVISG-CIPQDVRLVLVD-QLYVLS 738
Query: 421 ALGDGSMF-----------------YFS-----LDPASGRLTDKKKVTL--------GTQ 450
L +G + YFS +D G+ D V L G
Sbjct: 739 GLRNGMLLRFEWAPFSNSSGLNCPDYFSHCKEEMDTVVGK-KDNLPVNLLLIATRRIGIT 797
Query: 451 PTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALA 510
P L F +++ A SDRP ++ ++ L +++++ + H A
Sbjct: 798 PVFLVPFSDSLDSDIIALSDRPWLLQTARQSLSYTSISFQPSTH---------------A 842
Query: 511 TDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPS 570
T QK LG PR++ Y S+ +I R D+ + +
Sbjct: 843 TPVEMVHSKRRNAQKFQ-----LGGTPRKVIYHSESKL--LIVMRTDLYDT-------CT 888
Query: 571 ASTQAQNTTSSTISSLSYIKPGSTKQS 597
+ + S ++ S +KPG T +S
Sbjct: 889 SDICCVDPLSGSVLSSYKLKPGETGKS 915
Score = 41.6 bits (96), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLRIIR+GI +E+ GI G W + + + LVLSFV TRVL++
Sbjct: 469 EGSLRIIRSGINVEKLLKTAPVYQGITGTWTVKMKLTDVYHSFLVLSFVEETRVLSV 525
>gi|297598550|ref|NP_001045829.2| Os02g0137400 [Oryza sativa Japonica Group]
gi|255670583|dbj|BAF07743.2| Os02g0137400 [Oryza sativa Japonica Group]
Length = 845
Score = 96.7 bits (239), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 187/414 (45%), Gaps = 32/414 (7%)
Query: 161 MESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK- 219
++ +L PI+DM V +L + Q+ T G +LRI+R G+ I E A LP
Sbjct: 23 IDEIESLMPIMDMRVANLFDEETPQVFTACGRGPRSTLRILRPGLAISEMARSMLPAEPI 82
Query: 220 GIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTV 279
+W + D +V+SF T VL++ G +EE F + + ++
Sbjct: 83 AVWTVKKNINDMFDAYIVVSFANVTLVLSI-GETIEEVSDSQFLDTTHSLAVSLLGEDSL 141
Query: 280 LQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EI 337
+QV P+ I + RV+ W P K+I+ V N+ QV+ A +G ++ Y E+ + ++
Sbjct: 142 MQVHPNGIRHIRED--GRVNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQL 199
Query: 338 KQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEP 397
++ + + +VACL I+P+ +++ AVG + D + R+LS+ + C +P
Sbjct: 200 MEVEKQDMSGDVACLAIAPVPEGRQ-----RSRFLAVGSF-DNTIRILSVDP--DDCLQP 251
Query: 398 LGGEII---PRSILMTCFE------------GHCYLLVALGDGSMFYFSLDPASGRLTDK 442
L + + P S++ + + +L L +G +F ++D +G+L+D
Sbjct: 252 LSVQSVSSAPESLMFLEVQASVGGEDGADHPANLFLNAGLQNGVLFRTNVDMVTGQLSDT 311
Query: 443 KKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAES 502
+ LG +P L + S RP + Y + + ++ + S +++
Sbjct: 312 RSRFLGLRPPKLFPCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQ 371
Query: 503 YPDS-LALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554
+ +A+A D+ F TI+ + + + +PL PR+ + VI +
Sbjct: 372 CSEGVVAVAGDALRIF-TIEHLGETFNETAIPLRYTPRKFVILPKKKYLAVIES 424
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLGTA---VVHPEENEP 1059
V + I+D + + +L E A+S+ + F + + T +GTA P+ N
Sbjct: 491 VSCIRILDPKSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNL- 549
Query: 1060 KQGRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR- 1116
G I I+ + D+G+ L+ + + +++ ++C+F G+LLA + S +RL++ K LR
Sbjct: 550 SAGFIHIYKFVDEGRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRK 609
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
E F I + + D I VGD+ S +Y+ E + D P W+T+ +
Sbjct: 610 CENKLFPRTI-VSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHI 668
Query: 1177 DDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
D + GA+ N++ + +D + +ED T
Sbjct: 669 DFDTMAGADKFGNIYFARLPQDLSDEIEEDPT 700
>gi|440473070|gb|ELQ41892.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae Y34]
Length = 1229
Score = 96.7 bits (239), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 130/552 (23%), Positives = 221/552 (40%), Gaps = 78/552 (14%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E +G T V+ K++ I
Sbjct: 297 MHKLKG--SAGAFF------FLLQTEDGDLFKVTIDMVEDAEGNPTGEVRRLKIKYFDTI 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNR------------------------------ 149
+ L L +G +FV S G+ + +
Sbjct: 349 PVSNNLCILKSGFLFVASEFGNHLFYQFEKLGDDDEELEFFSSDFPVDPKEPYEPVYFYP 408
Query: 150 SPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEE 209
P EN ++++ES ++ P++D+ V +L + Q+ T SG + R++++G+ + E
Sbjct: 409 RPTEN---LALVESIDSMNPLMDLKVANLTEEDAPQIYTVSGKGARSTFRMLKHGLEVNE 465
Query: 210 HACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQT 268
LPG +W + D +VLSF T VL++ G VEE GF S T
Sbjct: 466 IVASQLPGTPSAVWTTKLRRDDEYDAYIVLSFTNGTLVLSI-GETVEEVSDTGFLSSVPT 524
Query: 269 FYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCD 326
+ ++QV P I V+ W P +SI + N+ QV A +G
Sbjct: 525 LAVQQLGDDGLVQVHPKG---IRHIRNGVVNEWSSPQHRSIVAAATNERQVAVALSSGEI 581
Query: 327 VYY-LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLL 385
VY+ ++ GS LA + E+ ++ LS E ++ AVG D + R+L
Sbjct: 582 VYFEMDTDGS----LAEYDEKKEMFGT-VTSLSLGEVPEGRLRSSYLAVGC-DDCTVRIL 635
Query: 386 SL---PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPAS 436
SL +LE + L P ++ + E YL + L G LD +
Sbjct: 636 SLDPESTLESKSVQALTAA--PSALSIMSMEDSSSGGTTLYLHIGLNSGVYLRTVLDEVT 693
Query: 437 GRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNH 494
G LTD ++ LG + L T V A S R + +S + +N ++
Sbjct: 694 GELTDTRQKFLGPKAVRLFQVSVQKRTCVLALSSRSWLGFSDPVTKGFTMTPLNYEELEW 753
Query: 495 MCSLNAESYPDSLALATDSTFTFGTIDEIQKLHI-RTVPLGEAPRRIAYQESSQTFGVIT 553
+ +E + + I+++ I +++PL PR++A + + F I
Sbjct: 754 GWNFVSEQCEEGMVGVNGQFLRIFAIEKLGDNVIQKSIPLTYTPRKLAKHPTQRIFYTI- 812
Query: 554 TRIDIQEADGST 565
EAD +T
Sbjct: 813 ------EADNNT 818
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 9/195 (4%)
Query: 1027 EYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082
E ALS+ F +D ++ V+GT VV+P + F D +L+ I + ++
Sbjct: 885 EAALSMAVVSFASQDGESFLVVGTGKDMVVNPRRFTEGYIHVYRFSEDGRELEFIHKTKV 944
Query: 1083 KGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDL 1142
+ ++ F G+L+A I +R+++ + LR + + + L +G I+VGD+
Sbjct: 945 EEPPTALLPFQGRLVAGIGRMLRIYDLGLRQLLRKAQAEVAPQLIVSLNTQGSRIIVGDV 1004
Query: 1143 MRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAAT 1200
L + YK+ + D W T ++D + GA+ NL+I C + ++
Sbjct: 1005 QHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGADKFGNLWILRCPEKASQE 1064
Query: 1201 SDEDRTHLQEVGTVH 1215
SDE + EV VH
Sbjct: 1065 SDEPGS---EVHLVH 1076
>gi|440478305|gb|ELQ59147.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae P131]
Length = 1223
Score = 96.7 bits (239), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 130/552 (23%), Positives = 221/552 (40%), Gaps = 78/552 (14%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E +G T V+ K++ I
Sbjct: 297 MHKLKG--SAGAFF------FLLQTEDGDLFKVTIDMVEDAEGNPTGEVRRLKIKYFDTI 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNR------------------------------ 149
+ L L +G +FV S G+ + +
Sbjct: 349 PVSNNLCILKSGFLFVASEFGNHLFYQFEKLGDDDEELEFFSSDFPVDPKEPYEPVYFYP 408
Query: 150 SPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEE 209
P EN ++++ES ++ P++D+ V +L + Q+ T SG + R++++G+ + E
Sbjct: 409 RPTEN---LALVESIDSMNPLMDLKVANLTEEDAPQIYTVSGKGARSTFRMLKHGLEVNE 465
Query: 210 HACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQT 268
LPG +W + D +VLSF T VL++ G VEE GF S T
Sbjct: 466 IVASQLPGTPSAVWTTKLRRDDEYDAYIVLSFTNGTLVLSI-GETVEEVSDTGFLSSVPT 524
Query: 269 FYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCD 326
+ ++QV P I V+ W P +SI + N+ QV A +G
Sbjct: 525 LAVQQLGDDGLVQVHPKG---IRHIRNGVVNEWSSPQHRSIVAAATNERQVAVALSSGEI 581
Query: 327 VYY-LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLL 385
VY+ ++ GS LA + E+ ++ LS E ++ AVG D + R+L
Sbjct: 582 VYFEMDTDGS----LAEYDEKKEMFGT-VTSLSLGEVPEGRLRSSYLAVGC-DDCTVRIL 635
Query: 386 SL---PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPAS 436
SL +LE + L P ++ + E YL + L G LD +
Sbjct: 636 SLDPESTLESKSVQALTAA--PSALSIMSMEDSSSGGTTLYLHIGLNSGVYLRTVLDEVT 693
Query: 437 GRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNH 494
G LTD ++ LG + L T V A S R + +S + +N ++
Sbjct: 694 GELTDTRQKFLGPKAVRLFQVSVQKRTCVLALSSRSWLGFSDPVTKGFTMTPLNYEELEW 753
Query: 495 MCSLNAESYPDSLALATDSTFTFGTIDEIQKLHI-RTVPLGEAPRRIAYQESSQTFGVIT 553
+ +E + + I+++ I +++PL PR++A + + F I
Sbjct: 754 GWNFVSEQCEEGMVGVNGQFLRIFAIEKLGDNVIQKSIPLTYTPRKLAKHPTQRIFYTI- 812
Query: 554 TRIDIQEADGST 565
EAD +T
Sbjct: 813 ------EADNNT 818
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 9/195 (4%)
Query: 1027 EYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082
E ALS+ F +D ++ V+GT VV+P + F D +L+ I + ++
Sbjct: 885 EAALSMAVVSFASQDGESFLVVGTGKDMVVNPRRFTEGYIHVYRFSEDGRELEFIHKTKV 944
Query: 1083 KGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDL 1142
+ ++ F G+L+A I +R+++ + LR + + + L +G I+VGD+
Sbjct: 945 EEPPTALLPFQGRLVAGIGRMLRIYDLGLRQLLRKAQAEVAPQLIVSLNTQGSRIIVGDV 1004
Query: 1143 MRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAAT 1200
L + YK+ + D W T ++D + GA+ NL+I C + ++
Sbjct: 1005 QHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGADKFGNLWILRCPEKASQE 1064
Query: 1201 SDEDRTHLQEVGTVH 1215
SDE + EV VH
Sbjct: 1065 SDEPGS---EVHLVH 1076
>gi|443922899|gb|ELU42250.1| splicing factor 3B subunit 3 [Rhizoctonia solani AG-1 IA]
Length = 1212
Score = 96.7 bits (239), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 157/382 (41%), Gaps = 51/382 (13%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGH 243
Q G S R++R+G+ +EE +LPG+ G+W + + D ++LSFV
Sbjct: 459 QFYLACGRGARSSFRMLRHGLEVEESVSSELPGVPNGVWTVKVNDGDQYDKYIILSFVNG 518
Query: 244 TRVLTLSGAEVEETEMGGFTSDQQTFYCG---------NVDPRTVLQVTPSAAILISTES 294
T VL++ G +EE GF S T V P V V PS L ST
Sbjct: 519 TLVLSI-GETIEEVADTGFLSSAPTLAVQQLADNGGLIQVHPGGVRHVRPSQGDLAST-- 575
Query: 295 KARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYEVAC 351
A V+ W P G+ ++ + N QV A +G VY+ L+++G + RA+ V C
Sbjct: 576 -AGVTEWRAPQGRQVASATTNTRQVCVALNSGELVYFELDLNGVLQEYGEMRAVGSAVVC 634
Query: 352 LDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTC 411
+ I+ + G + S L P ++ LG L+T
Sbjct: 635 MSIAEVPE---------------GRQPNGSNHFLG-PRVD------LGNH------LVTG 666
Query: 412 FEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDR 471
H ++LV G S+ A G T LGT+P L T + A S R
Sbjct: 667 LSRHVWMLVV---GLTNETSVVGAHG--TSNVYFFLGTRPVRLTRVSVQRNTCILALSSR 721
Query: 472 PTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ-KLHIRT 530
+ Y+ + L FS + ++H S +AE P+ L S I ++ KL T
Sbjct: 722 SWLNYTHQNLLRFSPLIYENLDHAWSFSAELCPEGLIGIAGSVLRIFQIPKLSDKLKQVT 781
Query: 531 VPLGEAPRRIAYQESSQTFGVI 552
+PL PR+IA Q F VI
Sbjct: 782 MPLSYTPRKIAVHPEHQLFYVI 803
Score = 44.3 bits (103), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 6/172 (3%)
Query: 1027 EYALSLISSKFGEDPNTYF-VLGTAV---VHPEE--NEPKQGRIIIFHYDDGKLQQIAEK 1080
E A S+ F N F V+GTA V P + G ++ + L + +
Sbjct: 878 ESAFSVAVVPFAARENELFLVVGTAKDTNVLPRQCVGAVTSGSLVKLGWSTHILTRPIQT 937
Query: 1081 EIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVG 1140
E+ ++ G+L A + +R++E +K LR + + L +G I+VG
Sbjct: 938 EVDDVPLALLGIKGRLCAGVGKALRIYEMGKKKLLRKSENKGFATAIVTLTSQGSRIIVG 997
Query: 1141 DLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI 1192
++ S+ YK + D + W+TS ++D + + N+F+
Sbjct: 998 EMQESVHYATYKPESNRLLVFADDTSARWVTSAALVDYDTVAVGDKFGNIFV 1049
Score = 43.1 bits (100), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 3 SLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
S R++R+G+ +EE +LPG+ G+W + + D ++LSFV T VL++
Sbjct: 471 SFRMLRHGLEVEESVSSELPGVPNGVWTVKVNDGDQYDKYIILSFVNGTLVLSI 524
>gi|58258783|ref|XP_566804.1| U2 snRNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819361|sp|P0CR23.1|RSE1_CRYNB RecName: Full=Pre-mRNA-splicing factor RSE1
gi|338819362|sp|P0CR22.1|RSE1_CRYNJ RecName: Full=Pre-mRNA-splicing factor RSE1
gi|57222941|gb|AAW40985.1| U2 snRNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1217
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/482 (23%), Positives = 188/482 (39%), Gaps = 46/482 (9%)
Query: 112 KVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTY-------------- 157
K++ + + L L G ++V S D L + +++G
Sbjct: 337 KIKYFDTVPVANSLCILKRGYIYVASEFSDQNLYQFQSLAEDDGEQEWSSTDYPENGNID 396
Query: 158 ---------------VSVMESFTNLAPIIDMVVVDL--ERQGQGQLVTCSGGFKEGSLRI 200
+ ++++ +L PI D VV+L Q+ G + R
Sbjct: 397 GPLPFAFFDPQPLRNLLLVDTVPSLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRT 456
Query: 201 IRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
+++G+ + E LPG+ +W L + D+ +VLSF T VL++ G +EE
Sbjct: 457 LKHGLDVAEMVSSPLPGVPTNVWTLKLTEDDEYDSYIVLSFPNGTLVLSI-GETIEEVND 515
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF S T + +LQV P L + RV W P G++I + N+ QV
Sbjct: 516 TGFLSSGPTLAVQQLGNAGLLQVHPYG--LRHIRAADRVDEWPAPPGQTIVAATTNRRQV 573
Query: 320 LCA--TGCDVYY-LEVHGSEIKQLAHRALEYEVACLDIS--PLSNEETSSEPA---KAQL 371
+ A T VY+ L+ GS + +AL C+ I+ P TS +
Sbjct: 574 VIALSTAELVYFELDPEGSLSEYQEKKALPGNATCVTIAEVPEGRRRTSFLAVGCDNQTV 633
Query: 372 AAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFS 431
+ + L D + LSL +L EI SI +L + L +G +
Sbjct: 634 SIISLEPDSTLDTLSLQALTAPPTSICLAEIFDTSIDKN--RATMFLNIGLMNGVLLRTV 691
Query: 432 LDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQ 491
+DP G L+D + LG +P L +V A S R ++Y+ L +
Sbjct: 692 VDPVDGSLSDTRLRFLGAKPPKLVRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYDT 751
Query: 492 VNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFG 550
+ + SL+A PD L + +T I ++ +KL + L PR+ + F
Sbjct: 752 LEYAWSLSAAMCPDGLIGISGNTLRIFNIPKLGEKLKQDSTALTYTPRKFISHPFNSVFY 811
Query: 551 VI 552
+I
Sbjct: 812 MI 813
Score = 45.1 bits (105), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 1060 KQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLEC 1119
+QGRI+ F L + +I + F G LLA I ++RL+E + LR +C
Sbjct: 931 EQGRILEF------LHKTKTDDIP---LCLAGFQGFLLAGIGKSLRLYEMGKKALLR-KC 980
Query: 1120 SHFNNIIALF-LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEI-SRDYNPNWMTSIEILD 1177
+ A+ + V+G I+VGD+ S Y+++ I + D P W+T + +D
Sbjct: 981 ENNGFPTAVVTINVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVD 1040
Query: 1178 DELFLGAENSYNLFICQKDSAATS--DEDRT 1206
E + N+FI + D + + D+D T
Sbjct: 1041 YETVACGDKFGNIFINRLDPSISEKVDDDPT 1071
>gi|389638952|ref|XP_003717109.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
gi|148887431|sp|Q52E49.2|RSE1_MAGO7 RecName: Full=Pre-mRNA-splicing factor RSE1
gi|351642928|gb|EHA50790.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
Length = 1216
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 130/552 (23%), Positives = 221/552 (40%), Gaps = 78/552 (14%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E +G T V+ K++ I
Sbjct: 297 MHKLKG--SAGAFF------FLLQTEDGDLFKVTIDMVEDAEGNPTGEVRRLKIKYFDTI 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNR------------------------------ 149
+ L L +G +FV S G+ + +
Sbjct: 349 PVSNNLCILKSGFLFVASEFGNHLFYQFEKLGDDDEELEFFSSDFPVDPKEPYEPVYFYP 408
Query: 150 SPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEE 209
P EN ++++ES ++ P++D+ V +L + Q+ T SG + R++++G+ + E
Sbjct: 409 RPTEN---LALVESIDSMNPLMDLKVANLTEEDAPQIYTVSGKGARSTFRMLKHGLEVNE 465
Query: 210 HACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQT 268
LPG +W + D +VLSF T VL++ G VEE GF S T
Sbjct: 466 IVASQLPGTPSAVWTTKLRRDDEYDAYIVLSFTNGTLVLSI-GETVEEVSDTGFLSSVPT 524
Query: 269 FYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCD 326
+ ++QV P I V+ W P +SI + N+ QV A +G
Sbjct: 525 LAVQQLGDDGLVQVHPKG---IRHIRNGVVNEWSSPQHRSIVAAATNERQVAVALSSGEI 581
Query: 327 VYY-LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLL 385
VY+ ++ GS LA + E+ ++ LS E ++ AVG D + R+L
Sbjct: 582 VYFEMDTDGS----LAEYDEKKEMFGT-VTSLSLGEVPEGRLRSSYLAVGC-DDCTVRIL 635
Query: 386 SL---PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPAS 436
SL +LE + L P ++ + E YL + L G LD +
Sbjct: 636 SLDPESTLESKSVQALTAA--PSALSIMSMEDSSSGGTTLYLHIGLNSGVYLRTVLDEVT 693
Query: 437 GRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNH 494
G LTD ++ LG + L T V A S R + +S + +N ++
Sbjct: 694 GELTDTRQKFLGPKAVRLFQVSVQKRTCVLALSSRSWLGFSDPVTKGFTMTPLNYEELEW 753
Query: 495 MCSLNAESYPDSLALATDSTFTFGTIDEIQKLHI-RTVPLGEAPRRIAYQESSQTFGVIT 553
+ +E + + I+++ I +++PL PR++A + + F I
Sbjct: 754 GWNFVSEQCEEGMVGVNGQFLRIFAIEKLGDNVIQKSIPLTYTPRKLAKHPTQRIFYTI- 812
Query: 554 TRIDIQEADGST 565
EAD +T
Sbjct: 813 ------EADNNT 818
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 9/195 (4%)
Query: 1027 EYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082
E ALS+ F +D ++ V+GT VV+P + F D +L+ I + ++
Sbjct: 885 EAALSMAVVSFASQDGESFLVVGTGKDMVVNPRRFTEGYIHVYRFSEDGRELEFIHKTKV 944
Query: 1083 KGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDL 1142
+ ++ F G+L+A I +R+++ + LR + + + L +G I+VGD+
Sbjct: 945 EEPPTALLPFQGRLVAGIGRMLRIYDLGLRQLLRKAQAEVAPQLIVSLNTQGSRIIVGDV 1004
Query: 1143 MRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAAT 1200
L + YK+ + D W T ++D + GA+ NL+I C + ++
Sbjct: 1005 QHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGADKFGNLWILRCPEKASQE 1064
Query: 1201 SDEDRTHLQEVGTVH 1215
SDE + EV VH
Sbjct: 1065 SDEPGS---EVHLVH 1076
>gi|443896643|dbj|GAC73987.1| predicted DNA methylase [Pseudozyma antarctica T-34]
Length = 1285
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 115/508 (22%), Positives = 204/508 (40%), Gaps = 64/508 (12%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G LF + ++ ++ ++ +++ + + L L +G +FV S G L
Sbjct: 383 GDLFKVTMDHQDD-----EIRALRIKYFDTVPVASGLCILRSGFLFVASEFGPQLLYSFQ 437
Query: 149 R--SPDENGTYVSV-------------MESFT--------------NLAPIIDMVVVDLE 179
+ DE Y+S + +FT +L PI+D ++
Sbjct: 438 KLGDDDELPEYISTDYDDYGAGRRRPQLPTFTPRPLDNLMQVDEVPSLDPILDATPLNPL 497
Query: 180 RQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVL 238
Q+ G S +++R+G+ E DLPG+ +W I D+ +VL
Sbjct: 498 ASDSPQIFAACGRGARSSFKMLRHGLEALEAVSSDLPGVPSAVWTTKITRRDEYDSYIVL 557
Query: 239 SFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARV 298
SFV T +L++ G +EE G + T + +LQV P I + + +
Sbjct: 558 SFVNGTLLLSI-GETIEEVSDSGLLTSSSTLAVQQLGEDALLQVHPHGIRHILVDKQ--I 614
Query: 299 SSW---EPPNGKSISVVSC--NKNQVLCATGCD--VYY-LEVHGSEIKQLAHRALEYEVA 350
+ W PNG+ ++V+ N+ QV+ A + VY+ L++ G + +A+ V
Sbjct: 615 NEWVTPSLPNGRQTTIVATCTNERQVVVALSSNELVYFELDMDGQLNEYQERKAMGAPVL 674
Query: 351 CLDIS--PLSNEETS--------SEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGG 400
+ + P + T+ S L IS + L+ P+ +C +
Sbjct: 675 TMSMPECPEGRQRTAYLAVGCGDSTVRIVSLEPSSTLASISIQALTAPA-SSICMAEMHD 733
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
+ R T ++ + L +G + LD +G+LTD + LG++ L R
Sbjct: 734 STVDRHHATT------FVNIGLQNGVLLRTVLDGVTGQLTDTRTRFLGSKAVRLVRTRVH 787
Query: 461 STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTI 520
T V A S R + ++ ++ F+ + ++H S +AE PD L ST TI
Sbjct: 788 GQTAVMALSTRTWLSFTYQSRVQFTPLIFDALDHAWSFSAELCPDGLIGIVGSTLRIFTI 847
Query: 521 DEI-QKLHIRTVPLGEAPRRIAYQESSQ 547
+ KL +V L PRR+A Q
Sbjct: 848 ASLASKLKQDSVALSYTPRRMASHPDGQ 875
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 6/154 (3%)
Query: 1060 KQGRIIIFHYDDG--KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRL 1117
K+ + + +G +L+ + + E+ + F G+LLA + +R++E +K LR
Sbjct: 988 KKAYLTTYRLGNGGRELEVVHKTEVDDVPLVLRAFQGRLLAGVGKVLRIYELGKKKLLR- 1046
Query: 1118 ECSHFNNIIALF-LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
+C + + A+ L +G I+VGD+ S+ YK +E + D P ++T +L
Sbjct: 1047 KCENRSFPTAIVALDAQGSRIVVGDMQESVIFASYKPLENRLVTFADDIMPRYVTRCTML 1106
Query: 1177 DDELFLGAENSYNLFICQ--KDSAATSDEDRTHL 1208
D + A+ N+++ + D++ + DED T +
Sbjct: 1107 DYDTVAAADKFGNVYVVRIDADTSRSVDEDVTGM 1140
>gi|405117821|gb|AFR92596.1| pre-mRNA-splicing factor RSE1 [Cryptococcus neoformans var. grubii
H99]
Length = 1217
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 190/483 (39%), Gaps = 48/483 (9%)
Query: 112 KVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTY-------------- 157
K++ + + L L G ++V S D L + +++G
Sbjct: 337 KIKYFDTVPVANSLCILKRGYIYVASEFSDQNLYQFQSLAEDDGEQEWSSTDYPENGNID 396
Query: 158 ---------------VSVMESFTNLAPIIDMVVVDL--ERQGQGQLVTCSGGFKEGSLRI 200
+ ++++ +L PI D VV+L Q+ G + R
Sbjct: 397 GPLPFAFFDPQPLRNLLLVDTVPSLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRT 456
Query: 201 IRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
+++G+ + E LPG+ +W L + D+ +VLSF T VL++ G +EE
Sbjct: 457 LKHGLDVAEMVSSPLPGVPTNVWTLKLTEDDEYDSYIVLSFPNGTLVLSI-GETIEEVND 515
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF S T + +LQV P L + RV W P G++I + N+ QV
Sbjct: 516 TGFLSSGPTLAVQQLGNAGLLQVHPYG--LRHIRAADRVDEWPAPPGQTIVAATTNQRQV 573
Query: 320 LCA--TGCDVYY-LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKA------Q 370
+ A T VY+ L+ GS + +AL C+ I+ + E P A
Sbjct: 574 VIALSTAELVYFELDPEGSLSEYQEKKALPGNATCVTIAEVP-EGRRRTPFLAVGCDNQT 632
Query: 371 LAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYF 430
++ + L D + LSL +L EI SI +L + L +G +
Sbjct: 633 VSIISLEPDSTLDTLSLQALTAPPTSICLAEIFDTSIDKN--RATMFLNIGLMNGVLLRT 690
Query: 431 SLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLR 490
+DP G L+D + LG +P L +V A S R ++Y+ L +
Sbjct: 691 VVDPVDGSLSDTRLRFLGAKPPKLVRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYD 750
Query: 491 QVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTF 549
+ + SL+A PD L + +T +I ++ +KL + L PR+ + F
Sbjct: 751 TLEYAWSLSAAMCPDGLIGISGNTLRIFSIPKLGEKLKQDSTALTYTPRKFISHPFNSVF 810
Query: 550 GVI 552
+I
Sbjct: 811 YMI 813
Score = 44.7 bits (104), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKF---GEDPNTYFVLGTAV---VHPEENEPKQG 1062
++D E + L E A S+ + F G +P + V+GT V + P+ +
Sbjct: 867 VLDPLANETIMTLDLDEDEAAFSIAIAYFERGGGEP--FLVVGTGVKTTLQPKGCKEGYL 924
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHF 1122
R+ L+ + + + + F G LLA + ++RL+E + LR +C +
Sbjct: 925 RVYAIKEQGRVLEFLHKTKTDDIPLCLAGFQGFLLAGVGKSLRLYEMGKKALLR-KCENN 983
Query: 1123 NNIIALF-LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEI-SRDYNPNWMTSIEILDDEL 1180
A+ + V+G I+VGD+ S Y+++ I + D P W+T + +D E
Sbjct: 984 GFPTAVVTINVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYET 1043
Query: 1181 FLGAENSYNLFICQKDSAATS--DEDRT 1206
+ N+FI + D + + D+D T
Sbjct: 1044 VACGDKFGNIFINRLDPSISEKVDDDPT 1071
>gi|320587625|gb|EFX00100.1| nuclear mRNA splicing factor protein [Grosmannia clavigera kw1407]
Length = 1220
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 126/549 (22%), Positives = 219/549 (39%), Gaps = 72/549 (13%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G L L L+ E DG T V K++ I
Sbjct: 298 MHKLKG--SAGAFF------FLLQTEDGDLLKLTLDMVEDDDGNPTGEVLRLKIKYFDTI 349
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN------------------------- 154
+ L L +G +F S G+ Q + + D++
Sbjct: 350 PVASSLCILKSGFLFSASEFGNHQFYQFEKLGDDDDELEFSSDNFPHEPKAPYEPVYFYP 409
Query: 155 --GTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
++++ES ++ P++D V +L Q+ + G + R++++ + + E
Sbjct: 410 RPAENLALVESIESMNPMLDCKVANLTDDDVPQIYSVCGNGARSTFRMLKHALEVNEIVA 469
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
LPG +W + + D +VLSF T VL++ G VEE GF S T
Sbjct: 470 SQLPGTPTAVWTTKVRRDEEYDAFIVLSFNNGTLVLSI-GETVEEVTDTGFLSSVPTLAV 528
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY 329
+ ++QV P I RV+ W P +SI + N+ QV+ A +G VY+
Sbjct: 529 QQLGDDGLIQVHPKG---IRHIRDGRVNEWAAPQHRSIVAAATNERQVVVALSSGEIVYF 585
Query: 330 -LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL- 387
++ GS + + + V CL + + ++ AVG D + R+LSL
Sbjct: 586 EMDTDGSLAEYDEKKEMFGTVTCLSLGAVPEGRL-----RSSYLAVGC-DDCTVRILSLD 639
Query: 388 --PSLEEVCKEPLGGEIIPRSILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRL 439
+L+ + + L P S+L+ + YL + L G LD +G L
Sbjct: 640 PETTLDNMSIQALTAA--PSSLLIMAMDDSSAGGTALYLHIGLHSGVYLRTVLDEVTGEL 697
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIY--SSNHKLVFSNVNLRQVNHMCS 497
TD ++ LG + L V A S RP + Y S + ++ ++ +
Sbjct: 698 TDTRQRFLGPKLVRLFQVSVQRRVCVLALSSRPWLGYDDSKAKNFAMTRLDYSELEWGWN 757
Query: 498 LNAESYPDSLALATDSTFTFGTIDEIQKLHI-RTVPLGEAPRRIAYQESSQTFGVITTRI 556
++E + + + +I+++ I ++ PL PRR+ FG+ T
Sbjct: 758 FSSEQCEEGMVGIHGNFLRIFSIEKLGDALIQKSFPLTYTPRRLVKHPE---FGIFYT-- 812
Query: 557 DIQEADGST 565
EAD +T
Sbjct: 813 --IEADNNT 819
Score = 42.4 bits (98), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 88/193 (45%), Gaps = 7/193 (3%)
Query: 1029 ALSLISSKFGEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGA 1085
A++ S+ GE +Y ++GT ++ P + F D +L+ + + +++
Sbjct: 888 AVASFVSRGGE---SYLIVGTGRNMILSPRQFSEGYIHAYRFVKDGTQLELVHKTKVEEP 944
Query: 1086 CYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRS 1145
++ F G++L I + +R+++ ++ LR S ++ + + L+ +G ++VGD+
Sbjct: 945 PTALLAFQGRILVGIGNVLRIYDLGIKQMLRKAQSEVSSKLIVSLQTQGSRVVVGDVEEG 1004
Query: 1146 LTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDR 1205
+T + YK D W T ++D + G + NL+I + A+ D D
Sbjct: 1005 VTYVVYKPEINKLLPFVDDTIKRWTTCTTMVDYQSVAGGDKFGNLWILRVSDKASQDADE 1064
Query: 1206 THLQEVGTVHLVG 1218
E+ VH G
Sbjct: 1065 PG-SELQLVHARG 1076
>gi|378730761|gb|EHY57220.1| pre-mRNA-splicing factor rse1, variant [Exophiala dermatitidis
NIH/UT8656]
Length = 914
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 112/507 (22%), Positives = 201/507 (39%), Gaps = 52/507 (10%)
Query: 89 GRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVK 146
G LF + ++ E +G T V+ K++ + + L L +G +FV S G+ +
Sbjct: 17 GDLFKVTIDMVEDDNGQLTGEVRALKIKYFDTVPVANSLHILKSGFLFVASESGNHHFYQ 76
Query: 147 LNRSPDEN---------------GTY------------VSVMESFTNLAPIIDMVVVDLE 179
+ D++ Y +++++S P++D V +L
Sbjct: 77 FEKLGDDDEETEFTSDDYPADPTAAYTPAFFHVRPLSNLNLVQSVDAANPLLDCKVANLL 136
Query: 180 RQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVL 238
+ Q+ + G S + +++G+ + E +LP + +W + D ++L
Sbjct: 137 DEDAPQIYSICGAGARSSFKTLKHGLSVSEIVESELPDKPEAVWTTKLTRDDQYDAYIIL 196
Query: 239 SFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARV 298
SF T VL++ G VEE GF S T + ++QV P I + RV
Sbjct: 197 SFRTGTLVLSI-GETVEEVTDTGFLSTAPTLAVQQLGEDALVQVHPKGIRHIRADK--RV 253
Query: 299 SSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYEVACLDIS 355
+ W P +SI + N+ QV A +G VY+ ++ GS + R + V CL +
Sbjct: 254 NEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDERREMTGTVTCLSLG 313
Query: 356 PLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPRSILM--- 409
+ ++ AVG D + R+LSL +LE + L SI+
Sbjct: 314 DVPEGR-----VRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAMAD 367
Query: 410 -TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFAC 468
T YL + L G LD +G L+D + LG +P L V A
Sbjct: 368 STSGGTTMYLHIGLYSGVYLRTVLDEITGELSDTRTRFLGLRPAKLFRVSVKGQNAVMAL 427
Query: 469 SDRPTVIYSSNHK--LVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQK- 525
S RP + Y+ + + ++ + ++ + +E P+ + +I+++ +
Sbjct: 428 SSRPWLGYTDTQTNGFMLTPLDYVPLQYVWNFTSEQCPEGMVGIQGQNLRIFSIEDLSRN 487
Query: 526 LHIRTVPLGEAPRRIAYQESSQTFGVI 552
L +PL PR+ F VI
Sbjct: 488 LLQENIPLPYTPRKFVKHPDQPLFYVI 514
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
NT ++ +L E A S+ ++ F +D + ++GTA VV P + FH
Sbjct: 568 NTKSVVFTLELEDNECATSITTAPFASQDDEVFLIVGTAKDLVVSPRSFSAGFLHVYRFH 627
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
D +L+ I + +++ ++ F G+LLA + +R+++ ++ LR +C + +
Sbjct: 628 EDGKELEFIHKTKVEQPPTALLAFQGRLLAGVGPDLRIYDLGMKQMLR-KCQVTTPNLIV 686
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T YK E D W T ++D E G +
Sbjct: 687 GLQTQGSRIIVSDIQESVTYCVYKFQENKLIPFCDDVIARWTTCCTMVDYETVAGGDKFG 746
Query: 1189 NLFI--CQKDSAATSDEDRT 1206
NL++ C + + +DED +
Sbjct: 747 NLWMLRCPQKVSEEADEDNS 766
>gi|378730762|gb|EHY57221.1| pre-mRNA-splicing factor rse1 [Exophiala dermatitidis NIH/UT8656]
Length = 1210
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 111/507 (21%), Positives = 201/507 (39%), Gaps = 52/507 (10%)
Query: 89 GRLFMLLLEKEEKMDGTFS--VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVK 146
G LF + ++ E +G + V+ K++ + + L L +G +FV S G+ +
Sbjct: 313 GDLFKVTIDMVEDDNGQLTGEVRALKIKYFDTVPVANSLHILKSGFLFVASESGNHHFYQ 372
Query: 147 LNRSPDEN---------------GTY------------VSVMESFTNLAPIIDMVVVDLE 179
+ D++ Y +++++S P++D V +L
Sbjct: 373 FEKLGDDDEETEFTSDDYPADPTAAYTPAFFHVRPLSNLNLVQSVDAANPLLDCKVANLL 432
Query: 180 RQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVL 238
+ Q+ + G S + +++G+ + E +LP + +W + D ++L
Sbjct: 433 DEDAPQIYSICGAGARSSFKTLKHGLSVSEIVESELPDKPEAVWTTKLTRDDQYDAYIIL 492
Query: 239 SFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARV 298
SF T VL++ G VEE GF S T + ++QV P I + RV
Sbjct: 493 SFRTGTLVLSI-GETVEEVTDTGFLSTAPTLAVQQLGEDALVQVHPKGIRHIRADK--RV 549
Query: 299 SSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYEVACLDIS 355
+ W P +SI + N+ QV A +G VY+ ++ GS + R + V CL +
Sbjct: 550 NEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDERREMTGTVTCLSLG 609
Query: 356 PLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPRSILM--- 409
+ ++ AVG D + R+LSL +LE + L SI+
Sbjct: 610 DVPEGR-----VRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAMAD 663
Query: 410 -TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFAC 468
T YL + L G LD +G L+D + LG +P L V A
Sbjct: 664 STSGGTTMYLHIGLYSGVYLRTVLDEITGELSDTRTRFLGLRPAKLFRVSVKGQNAVMAL 723
Query: 469 SDRPTVIYSSNHK--LVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQK- 525
S RP + Y+ + + ++ + ++ + +E P+ + +I+++ +
Sbjct: 724 SSRPWLGYTDTQTNGFMLTPLDYVPLQYVWNFTSEQCPEGMVGIQGQNLRIFSIEDLSRN 783
Query: 526 LHIRTVPLGEAPRRIAYQESSQTFGVI 552
L +PL PR+ F VI
Sbjct: 784 LLQENIPLPYTPRKFVKHPDQPLFYVI 810
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKFG-EDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
NT ++ +L E A S+ ++ F +D + ++GTA VV P + FH
Sbjct: 864 NTKSVVFTLELEDNECATSITTAPFASQDDEVFLIVGTAKDLVVSPRSFSAGFLHVYRFH 923
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
D +L+ I + +++ ++ F G+LLA + +R+++ ++ LR +C + +
Sbjct: 924 EDGKELEFIHKTKVEQPPTALLAFQGRLLAGVGPDLRIYDLGMKQMLR-KCQVTTPNLIV 982
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T YK E D W T ++D E G +
Sbjct: 983 GLQTQGSRIIVSDIQESVTYCVYKFQENKLIPFCDDVIARWTTCCTMVDYETVAGGDKFG 1042
Query: 1189 NLFI--CQKDSAATSDEDRT 1206
NL++ C + + +DED +
Sbjct: 1043 NLWMLRCPQKVSEEADEDNS 1062
>gi|68531971|ref|XP_723667.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478038|gb|EAA15232.1| Drosophila melanogaster CG13900 gene product [Plasmodium yoelii
yoelii]
Length = 1235
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 105/474 (22%), Positives = 204/474 (43%), Gaps = 52/474 (10%)
Query: 108 VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKL----NRSPDENGTY------ 157
VKE + + I + L +G +FV + G+ + N S D T
Sbjct: 322 VKEIICKYFDTVPIANSICVLKSGALFVAAEFGNHFFYQFSGIGNDSNDAMCTSNHPSGK 381
Query: 158 -------------VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNG 204
+ +++ +L+PI+DM ++D + Q+ G SLRI+++G
Sbjct: 382 NAIIAFKTQKLKNLYLVDQIYSLSPIVDMKILDAKNSNLPQIYALCGRGPRSSLRILQHG 441
Query: 205 IGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFT 263
+ IEE A +LPG + IW + + D +++SF G+T +L + G VEE
Sbjct: 442 LSIEELANNELPGKPRYIWTVKKDNSSEYDGYIIVSFEGNTLILEI-GETVEEVYDSLLL 500
Query: 264 SDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA- 322
++ T + + + +QV + I+ + V W PP K I+ + N +Q++ +
Sbjct: 501 TNVTTIHINLLYDNSFIQVYDTGIRHINGKI---VQEWIPPKNKQINAATSNGSQIVVSL 557
Query: 323 TGCDVYYLEVHGSE-IKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDIS 381
+G ++ Y E+ S + ++ + + E+ CL I ++ +A AVG ++
Sbjct: 558 SGGELIYFEIDESHTLTEIFRKNINVEILCLSI-----QQIQQNKLRASFLAVGCLDNV- 611
Query: 382 ARLLSLPS---LEEVCKEPLGGEIIPRSILMTCFE--GH------CYLLVALGDGSMFYF 430
RLLS+ +++ L P+ I ++ + G+ YL + L G +
Sbjct: 612 VRLLSIEKDQYFKQLSTYILPNNSSPQDICISEMKELGNQKEHTILYLNIGLNTGVLLRS 671
Query: 431 SLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLR 490
+DP G L++ LG + + + + S++ + Y K ++S +N
Sbjct: 672 VIDPICGTLSNHYSKYLGAKSVKICHVQVNKNPALLVLSEKTYLCYVYQGKYIYSPLNYD 731
Query: 491 QVNHMCSLNAESYPDS-LALATDS--TFTFGTIDEIQKLHIRTVPLGEAPRRIA 541
+ + S +E D +A++ +S F F + E+ +I + L PR+I
Sbjct: 732 VLEYASSFYSEQCSDGYVAISGNSLRIFRFYRLGEVFSQNI--LHLTFTPRKIV 783
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 1066 IFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNN 1124
++ YD + KL + I+ Y C FNG+++ S+ + +R++ +K+L +C + +
Sbjct: 933 VYTYDINYKLNLLHITPIEDQPYCFCPFNGRVIVSVGNKLRIYAL-GKKKLLKKCEYKDI 991
Query: 1125 IIALF-LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
A+ +KV GD I D+ S+ + Y + + IS D P W+T EILD +
Sbjct: 992 PEAIVSIKVSGDRIFASDIRESVLIFFYDSNQNLIRLISDDIIPRWITCSEILDHHTIIA 1051
Query: 1184 AENSYNLFI 1192
A+ ++FI
Sbjct: 1052 ADKFDSVFI 1060
>gi|67600754|ref|XP_666354.1| CG13900 gene product [Cryptosporidium hominis TU502]
gi|54657334|gb|EAL36124.1| CG13900 gene product [Cryptosporidium hominis]
Length = 1318
Score = 93.2 bits (230), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 117/505 (23%), Positives = 203/505 (40%), Gaps = 72/505 (14%)
Query: 108 VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDS---QLVKLNRS---------PDENG 155
VKE ++ I + L L +G +F G+ Q+V L PD N
Sbjct: 317 VKEMRIYYYDTIPVCNSLLLLRSGFLFASHEFGNHTNYQIVSLGDDKTDPCTSSLPDSND 376
Query: 156 -----------TYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNG 204
+ E +L+PI D+ V+D G Q+V G +LR+ G
Sbjct: 377 LKRVYFRPRNCQCIRKSEEILSLSPITDIKVIDTNNDGTPQIVATCGRGPRSTLRVCSYG 436
Query: 205 IGIEEHACIDLPGI-KGIWALSIG-SPK------------NLDNTLVLSFVGHTRVLTLS 250
+EE A LPG + IW L G P N+ + +++SF+ + VLT+
Sbjct: 437 KNVEEIAENPLPGRPRCIWTLKNGIDPSLSGSQAEAAILDNIHHYIIISFIDRSLVLTI- 495
Query: 251 GAEVEETEMGGFTSDQQTFYCGN-VDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSI 309
G VEET FT ++ T Y + + + LQV + LI + R+ W+ P+ + I
Sbjct: 496 GEHVEETNDTLFTLNETTMYAASMIFYNSFLQVLETHVKLIIQD---RIYDWKTPDSRKI 552
Query: 310 SVVSCNKNQV-LCATGCDVYYLEVHGSEIK-----------QLAHRALEYEVACLDISPL 357
N QV L G + LE++ + + ++ R + E+ C+ I L
Sbjct: 553 IAADSNGRQVSLALEGGLIVILELNVNGVSGITNTGIGGLVEVCRREITCEIICIGIQQL 612
Query: 358 SNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRS--------ILM 409
S S ++ VG T+ + RL + S E+ K+ +I+P S +
Sbjct: 613 S----YSGQMRSDYVVVGTSTENALRLYKIDSAEKRLKQTC-TQILPNSNSIPENVQLYH 667
Query: 410 TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPT-VLKTFRSL--STTNVF 466
+ GH L V L G + +D ++G ++D + LG + + + R ++
Sbjct: 668 SNKYGHLILFVGLTTGVILSCKVDASNGSISDPRSKYLGNRGVNICRIMREDFGGEMSLV 727
Query: 467 ACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDE--IQ 524
S RP ++ S + F+ + R ++ + LN + + ST + + +
Sbjct: 728 CMSSRPWLVDSQTSGVNFTPLQYRCIDSIAPLNTHQVNNGYVAVSGSTLLIFQVTQGFGE 787
Query: 525 KLHIRTVPLGEAPRRIAYQESSQTF 549
++ L PR++ S Q F
Sbjct: 788 SFSQSSINLSYTPRKLLTLPSPQLF 812
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 7/153 (4%)
Query: 1055 EENEPKQGRII-IFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNE 1112
+EN G I IF YD + + I+ + ++ + G+LL IN T+R++ +
Sbjct: 1017 KENHDSFGAAIKIFKYDSNYNFELVHITPIENSATALTGWRGRLLVGINKTLRVYSLGKK 1076
Query: 1113 KELRLECSHFNNIIA--LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
+ LR S + NI ++KV D I GD+ + + ++ F +++D P W+
Sbjct: 1077 RLLRK--SEYRNIPQGLTWIKVVNDRIFAGDISNGVLVFKFNNTSNQFILVAKDPMPRWL 1134
Query: 1171 TS-IEILDDELFLGAENSYNLFICQKDSAATSD 1202
TS E+LD ++ N+ + + A+ D
Sbjct: 1135 TSACEVLDYHTIAVSDKFDNIIVSRVPVEASDD 1167
>gi|66361481|ref|XP_627314.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
gi|46228697|gb|EAK89567.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
Length = 1317
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 117/505 (23%), Positives = 203/505 (40%), Gaps = 72/505 (14%)
Query: 108 VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDS---QLVKLNRS---------PDENG 155
VKE ++ I + L L +G +F G+ Q+V L PD N
Sbjct: 317 VKEMRIYYYDTIPVCNSLLLLRSGFLFASHEFGNHTNYQIVSLGDDKTDPYTSSLPDSND 376
Query: 156 -----------TYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNG 204
+ E +L+PI D+ V+D G Q+V G +LR+ G
Sbjct: 377 LKRVYFRPRNCQCIRKSEEILSLSPITDIKVIDTNNDGTPQIVATCGRGPRSTLRVCSYG 436
Query: 205 IGIEEHACIDLPGI-KGIWALSIG-SPK------------NLDNTLVLSFVGHTRVLTLS 250
+EE A LPG + IW L G P N+ + +++SF+ + VLT+
Sbjct: 437 KNVEEIAENPLPGRPRCIWTLKNGIDPSLSGSQAEAAILDNIHHYIIISFIDRSLVLTI- 495
Query: 251 GAEVEETEMGGFTSDQQTFYCGN-VDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSI 309
G VEET FT ++ T Y + + + LQV + LI + R+ W+ P+ + I
Sbjct: 496 GEHVEETNDTLFTLNETTMYAASMIFYNSFLQVLETHVKLIIQD---RIYDWKTPDSRKI 552
Query: 310 SVVSCNKNQV-LCATGCDVYYLEVHGSEIK-----------QLAHRALEYEVACLDISPL 357
N QV L G + LE++ + + ++ R + E+ C+ I L
Sbjct: 553 IAADSNGRQVSLALEGGLIVILELNVNGVSGITNTGMGGLVEVCRREITCEIICIGIQQL 612
Query: 358 SNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRS--------ILM 409
S S ++ VG T+ + RL + S E+ K+ +I+P S +
Sbjct: 613 S----YSGQMRSDYVVVGTSTENALRLYKIDSAEKRLKQTC-TQILPNSNSIPENVQLYH 667
Query: 410 TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPT-VLKTFRSL--STTNVF 466
+ GH L V L G + +D ++G ++D + LG + + + R ++
Sbjct: 668 SNKYGHLILFVGLTTGVILSCKVDASNGSISDPRSKYLGNRGVNICRIMREDFGGEMSLV 727
Query: 467 ACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDE--IQ 524
S RP ++ S + F+ + R ++ + LN + + ST + + +
Sbjct: 728 CMSSRPWLVDSQTSGVNFTPLQYRCIDSIAPLNTHQVNNGYVAVSGSTLLIFQVTQGFGE 787
Query: 525 KLHIRTVPLGEAPRRIAYQESSQTF 549
++ L PR++ S Q F
Sbjct: 788 SFSQSSINLSYTPRKLLTLPSPQLF 812
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 7/153 (4%)
Query: 1055 EENEPKQGRII-IFHYDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNE 1112
+EN G I IF YD + + I+ + ++ + G+LL IN T+R++ +
Sbjct: 1016 KENHDSFGAAIKIFKYDSNYNFELVHITPIENSATALTGWRGRLLVGINKTLRVYSLGKK 1075
Query: 1113 KELRLECSHFNNIIA--LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
+ LR S + NI ++KV D I GD+ + + ++ F +++D P W+
Sbjct: 1076 RLLRK--SEYRNIPQGLTWIKVVNDRIFAGDISNGVLVFKFNNTSNQFILVAKDPMPRWL 1133
Query: 1171 TS-IEILDDELFLGAENSYNLFICQKDSAATSD 1202
TS E+LD ++ N+ + + + A+ D
Sbjct: 1134 TSACEVLDYHTIAVSDKFDNIIVSRVPAEASDD 1166
>gi|221116994|ref|XP_002166173.1| PREDICTED: DNA damage-binding protein 1-like, partial [Hydra
magnipapillata]
Length = 107
Score = 92.8 bits (229), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/85 (50%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T TDLNL+VAKNN++E+H VTPEGL+P ++ +YG++AVM+ FR + +DLLFI+T+R
Sbjct: 24 TGPTDLNLIVAKNNKLELHMVTPEGLQPKFDLNVYGRVAVMQLFRPQNENQDLLFILTER 83
Query: 744 YNAMILECRGDIDNLEILTKAHGNV 768
Y IL + + +I+TKA+G+V
Sbjct: 84 YRTAILAYKAETG--DIITKAYGDV 106
Score = 84.0 bits (206), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 52/66 (78%)
Query: 621 TFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLL 680
T +FT TDLNL+VAKNN++E+H VTPEGL+P ++ +YG++AVM+ FR + +DLL
Sbjct: 18 TVTGHFTGPTDLNLIVAKNNKLELHMVTPEGLQPKFDLNVYGRVAVMQLFRPQNENQDLL 77
Query: 681 FIITQR 686
FI+T+R
Sbjct: 78 FILTER 83
>gi|68075683|ref|XP_679761.1| splicing factor 3b, subunit 3, 130kD [Plasmodium berghei strain
ANKA]
gi|56500578|emb|CAH95367.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium berghei]
Length = 1216
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 198/473 (41%), Gaps = 51/473 (10%)
Query: 108 VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKL--------------NRSPDE 153
VKE + + I + L +G +FV + G+ + N +
Sbjct: 322 VKEIICKYFDTVPIANSICVLKSGALFVAAEFGNHFFYQFSGIGNDSNESMCTSNHPSGK 381
Query: 154 NGTYVSVMESFTNLA--------PIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGI 205
N + NL PI+DM ++D + Q+ G SLRI+++G+
Sbjct: 382 NAIIAFKTQKLKNLYLVDQIYSLPIVDMKILDAKNSNIPQIYALCGRGPRSSLRILQHGL 441
Query: 206 GIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTS 264
IEE A +LPG + IW + + D +++SF G+T +L + G VEE +
Sbjct: 442 SIEELANNELPGKPRYIWTIKKDNSSEYDGYIIVSFEGNTLILEI-GETVEEVYDSLLLT 500
Query: 265 DQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-T 323
+ T + + + +QV + I+ + V W PP K I+ + N +Q++ + +
Sbjct: 501 NVTTIHINLLYDNSFIQVYDTGIRHINGKI---VQEWVPPKNKQINAATSNGSQIVISLS 557
Query: 324 GCDVYYLEVHGSE-IKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISA 382
G ++ Y E+ S + ++ + + E+ CL I ++ +A AVG ++
Sbjct: 558 GGELIYFEIDESHTLTEIFRKNINVEILCLSI-----QQIQQNKLRASFLAVGCLDNV-V 611
Query: 383 RLLSLPS---LEEVCKEPLGGEIIPRSILMTCF------EGHC--YLLVALGDGSMFYFS 431
RLLS+ +++ L P+ I ++ + H YL + L G +
Sbjct: 612 RLLSIEKDQYFKQLSTYILPNNSSPQDICISEMKELGSQKEHTILYLNIGLNTGVLLRSV 671
Query: 432 LDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQ 491
+DP G L++ LG + + + + S++ + Y K ++S +N
Sbjct: 672 IDPICGTLSNHYSKYLGAKSVKICHVQVNKNPALLVLSEKTYLCYVYQGKYIYSPLNYDV 731
Query: 492 VNHMCSLNAESYPDS-LALATDS--TFTFGTIDEIQKLHIRTVPLGEAPRRIA 541
+ + S +E D +A++ +S F F + E+ +I + L PR+I
Sbjct: 732 LEYASSFYSEQCSDGYVAISGNSLRIFRFYRLGEVFSQNI--LHLTFTPRKIV 782
Score = 49.3 bits (116), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 1066 IFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNN 1124
++ YD + KL + I+ Y C FNGK++ S+ + +R++ +K+L +C + +
Sbjct: 929 VYTYDINYKLNLLHITPIEDQPYCFCPFNGKVIVSVGNKLRIYAL-GKKKLLKKCE-YKD 986
Query: 1125 IIALFLKVK-GDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I + +K + I D+ S+ + Y + + IS D P W+T EILD +
Sbjct: 987 IPEAIVSIKVSNRIFASDIRESVLIFFYDSNQNVIRLISDDIIPRWITCSEILDHHTIIA 1046
Query: 1184 AENSYNLFICQKDSAATSDE 1203
A+ ++FI + A +E
Sbjct: 1047 ADKFDSVFILRVPEEAKQEE 1066
>gi|440907208|gb|ELR57379.1| Splicing factor 3B subunit 3 [Bos grunniens mutus]
Length = 1133
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 147/344 (42%), Gaps = 32/344 (9%)
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D +++SFV T VL++ G VEE GF T C + ++QV P I
Sbjct: 368 FDAYIIVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 426
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EIKQLAHRA-LEYE 348
+ RV+ W+ P K+I + N+ QV+ A TG ++ Y E+ S ++ + R + +
Sbjct: 427 ADK--RVNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSAD 484
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSIL 408
V C+ ++ + E +++ AVGL D + R++SL + C +PL + +P
Sbjct: 485 VVCMSLANVPPGEQ-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQPE 536
Query: 409 MTCFE-----------------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQP 451
C G YL + L +G + LDP +G L+D + LG++P
Sbjct: 537 SLCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRP 596
Query: 452 TVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALAT 511
L R V A S R + YS + + ++ + +E P+ + +
Sbjct: 597 VKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAIS 656
Query: 512 DSTFTFGTIDEIQKLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+T ++++ + + PL PR+ S +I T
Sbjct: 657 TNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIET 700
Score = 42.4 bits (98), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 94/221 (42%), Gaps = 27/221 (12%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ Q E A S+ +F ++VL N ++ Y
Sbjct: 770 IQGNTLDLVQLEQ---NEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 826
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHF-- 1122
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E F
Sbjct: 827 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKAFLA 886
Query: 1123 ---NNIIALFLKVK------------GDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNP 1167
+++ +++ V+ G ++V D+ S ++YK E + D P
Sbjct: 887 DGSSSVFPMYVAVRHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYP 946
Query: 1168 NWMTSIEILDDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
W+T+ +LD + GA+ N+ + + ++ DED T
Sbjct: 947 RWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPT 987
>gi|407919154|gb|EKG12409.1| Cleavage/polyadenylation specificity factor A subunit [Macrophomina
phaseolina MS6]
Length = 1210
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 201/514 (39%), Gaps = 52/514 (10%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEISIPECLTYLDNGVVFVGS-- 137
+LL G LF + ++ E G T V K++ + + L L +G +FV +
Sbjct: 306 FLLQTEDGDLFKVTIDMVEDEQGQPTGDVSRLKIKYFDTVPVASSLCILKSGYLFVTAES 365
Query: 138 ---------RLGDS----QLVKLNRSPDENGTY------------VSVMESFTNLAPIID 172
+LGD + + N SP+ + Y +S+ +S ++ P +
Sbjct: 366 GNHHFYQFEKLGDDDEELEFISDNFSPEPDAPYEPVFFHPRGAENISLAQSVPSMNPTLG 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
V +L Q+ T G + + + +G+ + E +LP + + +W I +
Sbjct: 426 CKVANLTDDDAPQIYTVCGTGARSTFKTLTHGLEVSEIVESELPSVPEAVWTTKIRTGDE 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++LSF T VL++ G VEE GF S +T + ++QV P I
Sbjct: 486 YDAYIILSFSNGTLVLSI-GETVEEVTDTGFLSSTRTLAVQLLGEDALIQVHPKGIRHI- 543
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
++ R++ W P ++I + N+ QV A +G VY+ ++V GS + + +
Sbjct: 544 -QAGGRINEWPAPQHRTIVAATTNERQVAVALSSGEIVYFEMDVDGSLAEYDEKKEMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E ++ AVG D + R+LSL +LE + L
Sbjct: 603 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656
Query: 406 SILMTCFEGH----CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ YL + L G +D +G LTD + LG + L
Sbjct: 657 SIMAMADSSSGGSTLYLHIGLYSGVYLRTVIDEITGELTDTRTRFLGAKGVKLFRVTVQD 716
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQ--VNHMCSLNAESYPDSLALATDSTFTFGT 519
+ + A S R + YS F+ L + S N+E + T
Sbjct: 717 QSAILATSSRSWLGYSDQQTKAFTLTPLAYAPLEWGWSFNSEQCTQGMVGIQGQHLRIFT 776
Query: 520 IDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
I+ + L +PL PR + + F VI
Sbjct: 777 IENLSNNLLFENIPLMYTPRNLVRHPTEPLFYVI 810
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 986 STKQSTANQPADFNMEVEV----------------HNLLIIDQ-NTFEILHAHQLFPGEY 1028
ST+Q N PA N + ++ + ++D ++ E++H +L E
Sbjct: 820 STRQQLLNDPAAVNGDAKILPPEEFGYPRAEGHWASCIQVVDPISSKEVVHTLELEENES 879
Query: 1029 ALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKG 1084
A+S+ + F ++ T+ V+GTA VV P I + +L+ I + +++
Sbjct: 880 AVSVCLAPFTSQNDETFLVVGTAKDLVVAPRSYNCGYVHIYRLQENGRELEFIHKTKMEA 939
Query: 1085 ACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNI--IALFLKVKGDFILVGDL 1142
++ F GKLL + + +RL++ + LR + N + I + L+ +G I+ D+
Sbjct: 940 PPMALLPFQGKLLVGVEADLRLYDLGLRQLLR-KAQALNVVPNILIGLQTQGSRIVCSDV 998
Query: 1143 MRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSD 1202
S+T + YK +E + D W + ++D E G + N+++ + A+ +
Sbjct: 999 QESVTYVVYKHLENRLIQFCDDSIHRWTSCTAMVDYETTAGGDKFGNIWLVRCPPKASEE 1058
Query: 1203 EDRTHLQEVGTVHLVGD 1219
D +E +HL+ +
Sbjct: 1059 AD----EEGSGLHLINE 1071
>gi|224004656|ref|XP_002295979.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
associated protein [Thalassiosira pseudonana CCMP1335]
gi|209586011|gb|ACI64696.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
associated protein [Thalassiosira pseudonana CCMP1335]
Length = 1212
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 173/387 (44%), Gaps = 39/387 (10%)
Query: 163 SFTNLAPIIDMVVVDLE-RQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKG- 220
+ +LAP+I ++V +L + QL G SLR++R+G+ + E A +LPG+ G
Sbjct: 383 TLDSLAPVISVLVGELAGNEVSPQLYALCGRGPTSSLRVLRHGLSVTELAVSELPGVPGA 442
Query: 221 IWAL----SIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMG---GFTSDQQTFYCGN 273
++ + + + K D +V+SF T VL++ G VE EMG GF + + T C
Sbjct: 443 VFNVRDDQAAKNGKFYDRYIVVSFADATLVLSV-GETVE--EMGKESGFLTTEPTLACSA 499
Query: 274 V-------DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGC 325
+ ++QV P I + VS W P K I S N++Q+L A G
Sbjct: 500 LGNGGNGEQEGGIVQVYPGGVRHI---QRGSVSQWHVPGIKKIECASANESQILIALVGG 556
Query: 326 DVYYLEVH--GSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISAR 383
++ Y E+ + + A + + +V LD+ + ++ ++ AAVG D + R
Sbjct: 557 ELIYFELDPLSGNLMEAATKDVGADVCSLDVGAVPKGKS-----RSLFAAVG-CRDSTVR 610
Query: 384 LLSLP--SLEEVCKEPLGGEIIPRSILMTC-----FEGHCYLLVALGDGSMFYFSLDPAS 436
LLSL SL E G P S+ ++ G L V L DGS +DP +
Sbjct: 611 LLSLAPGSLLEQKSSTTLGTTRPHSVALSNGVGSDGAGEITLSVGLDDGSALRAGVDPIT 670
Query: 437 GRL-TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHM 495
G + T + LG +P + + + S RP + + + + ++ ++H
Sbjct: 671 GAMSTSPSRRFLGARPVAVSRVMIEGSPSTLLLSSRPWIGRAGQGRHALAPMSYAPLDHG 730
Query: 496 CSLNAESYPDSLALATDSTFTFGTIDE 522
CS + E+ + + + ST ++ E
Sbjct: 731 CSFSNEAVREGIVATSGSTLRILSVGE 757
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 1064 IIIFHYDDGKLQQIAEKEI--KGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECS- 1120
++++ +G+ Q+ + G S+ F G+LL + TVRL+E +++L +C
Sbjct: 923 VVLYRVVNGERLQLLHRTTVDDGPVLSLVHFQGRLLVGVGKTVRLYEM-GKRQLLKKCEL 981
Query: 1121 HFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILD 1177
+ L+ GD VGD+M+S+ ++Y + +++D NP +T E+LD
Sbjct: 982 RGMPTMVKTLQAAGDRAFVGDMMQSMQFIRYDSTANRLVLVAKDRNPRPITCQELLD 1038
>gi|440300137|gb|ELP92626.1| DNA damage-binding protein, putative [Entamoeba invadens IP1]
Length = 1086
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 188/441 (42%), Gaps = 51/441 (11%)
Query: 116 LGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVV 175
++SIP + YLDNGV+F GS G+S L+K+ E V+E+F N PI+DM+
Sbjct: 289 FAKLSIPSKVVYLDNGVLFWGSSGGNSYLIKIGEERME------VLETFENRGPILDMIT 342
Query: 176 VDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDN- 234
+ E + L+ CS + +G+L+++R+G+G+ ++ GI+ +W + D+
Sbjct: 343 LHDEISKKDDLLICSNTYHQGTLKLLRSGVGVNILGEVEYRGIEKMWKCFENAGDMSDDY 402
Query: 235 --TLVLSFVGHTRVLTLSG--AEVEETEMGG-FTSDQQTFYCGNVDPRTVLQVTPSAAI- 288
V+ + + + G +V+ E+ T + G+ D + V+ +I
Sbjct: 403 KEMYVIEGAFGSNFVHIEGRKGDVQIVEIANSVTVKGRIVGVGDFDGKLVVVTNGGISIA 462
Query: 289 ----------LISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIK 338
+STE S GK + N ++ A C + S+IK
Sbjct: 463 RVHDTIVEEQFVSTEEITHCVS----EGKDVVYSGRNTVKLFDAEKCVM-------SDIK 511
Query: 339 QLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPL 398
+ +IS + SSE + + VG W ++ +V
Sbjct: 512 RYEE----------EISSIGCYTVSSENTRERYIGVGRWEHKEIEIIDDQG--DVLDRVY 559
Query: 399 GGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPA-SGRLTDKKKV----TLGTQPTV 453
G+++ +SI +++ LGDG + ++ S ++ ++ KV +G
Sbjct: 560 IGDVVSKSIKFVGTPSTLKVIIGLGDGRVVVSNIRKKNSTQMEEEHKVGKVIEVGMGGVS 619
Query: 454 LKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDS 513
+ +RPT++ + K+ +VN+ + ++ P+S+ +A+
Sbjct: 620 IDEMAIDGKMYEICVCERPTLMSLDDDKIKMMSVNIGESVGFLGVHITGIPNSVLIASKE 679
Query: 514 TFTFGTIDEIQKLHIRTVPLG 534
+ G+I+E++ ++ +++ LG
Sbjct: 680 SLMIGSIEEVKAINTKSLELG 700
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 122/237 (51%), Gaps = 17/237 (7%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
EVH + +ID EI+ +L E+ ++ I K E+ Y V GTA E EP +G
Sbjct: 731 EVHFINLIDLRKMEIIDKVRLDKDEHGMA-IDVKEIEEKELYIV-GTAYAKLGEVEPSRG 788
Query: 1063 RIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHF 1122
R IIF + K+ +++ + + GA YS+ F + I +T++ + E ++ F
Sbjct: 789 RFIIFEIHEEKIIEVSNRYVDGAVYSVKRFENDVGNYIAATIQKKVVVYQIERKIVDGKF 848
Query: 1123 N-----------NIIALFLKVKGDFILVGDLMRSLTLLQY--KTMEGSFEEISRDYNPNW 1169
+I LF+K G ILVGDLM+S+++ ++ K + E RD+ ++
Sbjct: 849 AVTIEEKGGANVKLIGLFVKTLGHEILVGDLMKSISVFKFDEKATRNAVVETCRDFYASY 908
Query: 1170 MTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGL-VQCR 1225
T++E +D+ F+ +++ NL + +++ T++ ++ LQ +H VG+ + V C+
Sbjct: 909 TTAVEFMDEHCFMSSDSQGNLLVFTENTTTTNENEKFKLQNEAHIH-VGECINVMCK 964
Score = 44.3 bits (103), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 125/264 (47%), Gaps = 29/264 (10%)
Query: 691 LVVAKNNRIEIHTVTPEGLRP-VKEIFLYGKIAVMKFFRGPTDK--KDLLFIITQRYNAM 747
L+ ++N ++I+ ++ GL+ ++F Y I +++ +R K +D + I+T +
Sbjct: 32 LITSRNVYVDIYEMSENGLKQRYSQMFPYS-ITLIQTYRVTEGKSIRDFVIILTSNHQLT 90
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
I G+ L+++ +V DR+G+ + G + ++ +I L LYN KII L +
Sbjct: 91 ITRLEGN--TLKVVFGI--SVEDRLGRKAFYGALGVVMQNKYLI-LYLYNHQIKIISLPQ 145
Query: 808 DNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRH-VKTHEISLKEKEFTKTP 866
+ EL + S++ ++ + + +H + I +H D N + V +E+ + + +
Sbjct: 146 GDEELLSQSVKSVRIDQERIVGMHIIGDNQ-IALHSDQNTKKTVVFYEVKTDDFSVSNST 204
Query: 867 WKQ--DNIEMEASLVIPVPEPLGGAIIIGQESILYH---SGKSYVAVAPQIIKSSTIVCY 921
Q +N++ + G ++ S+ YH + KS PQI ++T C+
Sbjct: 205 EYQPIENVDFFVA-------HNNGFFVVQNGSLQYHYNTNTKSINVALPQITIATT--CF 255
Query: 922 AKVDANGERYLLGDLAGRLFMLLL 945
+D N R LL D G+ ++ L
Sbjct: 256 --LDNN--RLLLCDNTGKSHLITL 275
>gi|412993390|emb|CCO16923.1| predicted protein [Bathycoccus prasinos]
Length = 1273
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 163/381 (42%), Gaps = 33/381 (8%)
Query: 158 VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG 217
+++++ +L+P I + ++ +L+ G + R++R G+ + E A LPG
Sbjct: 413 LALIDEIESLSPTIALASNISRKEETPRLLALCGQGPRSTFRVLRQGVPLSEMARSPLPG 472
Query: 218 -IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC---GN 273
G++ + D +V+SF T VL++ G VEE G + T G+
Sbjct: 473 NPNGVFTIRKSKSDTTDAYIVVSFTNATLVLSI-GDTVEEVTDTGILATSSTLAVSALGD 531
Query: 274 VDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEV 332
D +++Q+ PS + +K V+ W P K I+ +CN+ Q + A TG ++ Y E+
Sbjct: 532 DDDGSLIQIHPSGVRHVRGNNKG-VNEWRAPGRKKITACACNRGQAIVALTGGELVYFEL 590
Query: 333 -HGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLE 391
++ ++ EV +DI P+ + +A+ AAV + D + R+LSL E
Sbjct: 591 DEAGQLLEIEKIETSSEVVSVDIPPIPDGSL-----RAKFAAVAGY-DSTVRVLSLNPGE 644
Query: 392 EVCKEPLGGEIIP---RSILM--------------TCFEGHCYLLVALGDGSMFYFSLDP 434
+ +G + P S+L+ + +L V L +G + +D
Sbjct: 645 AL--RTVGVQATPSPPESVLLLEVNNKTTKNKKAGSSAPPSMFLNVGLSNGILVRCEVDR 702
Query: 435 ASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNH 494
SG L+D + +G +P L + A S RP + ++ N + ++
Sbjct: 703 VSGALSDARSRFVGQRPPKLNRIEMNEESGFVALSTRPWLGFNENGRFSIVPACHETIDR 762
Query: 495 MCSLNAESYPDSLALATDSTF 515
C +E P+ + D +
Sbjct: 763 ACGFASEQVPEGIVAVVDGSL 783
Score = 49.3 bits (116), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 32/226 (14%)
Query: 979 LSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFG 1038
L+ I+ +STAN + N VH I+D E L ++ E +S+ + F
Sbjct: 872 LAPIEQFGAPKSTAND--NNNWSSCVH---IVDAANAETLCVQEIKNNERLVSVAHAYFA 926
Query: 1039 EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGK--------------------LQ 1075
+ V+G+ V+ P + + R + GK L+
Sbjct: 927 KADEVLLVVGSVKNFVLQPRDCDGGMIRCYRYKRGGGKSSNGETTANGKSGANKAITGLE 986
Query: 1076 QIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKG 1134
+ E +GA +++ F GKLL ++ +RL+++ +K LR EC+ ++ G
Sbjct: 987 LVHETPCEGAPFALRNFEGKLLVGVDDVLRLYDFGKKKLLRKAECAQKFPSFINDIRCSG 1046
Query: 1135 DFILVGDLMRSLTLLQY---KTMEGSFEEISRDYNPNWMTSIEILD 1177
D V D S ++Y E S + D P ++TS+ LD
Sbjct: 1047 DRFFVTDACESAFFVKYVREDDQECSMHIFADDIAPRYVTSMLPLD 1092
>gi|414882040|tpg|DAA59171.1| TPA: hypothetical protein ZEAMMB73_269016 [Zea mays]
Length = 690
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 184/412 (44%), Gaps = 32/412 (7%)
Query: 161 MESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK- 219
++ +L P++DM V +L + QL T G +LRI+R G+ I E A LP
Sbjct: 259 IDEIESLMPVMDMRVANLFDEETPQLFTACGRGPRSTLRILRPGLAISEMARSMLPAEPI 318
Query: 220 GIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTV 279
+W + D +V+SF T VL++ G +EE F + + ++
Sbjct: 319 AVWTVKKNINDMFDAYIVVSFTNVTLVLSI-GETIEEVSDSQFLDTTHSLAVTLLGEDSL 377
Query: 280 LQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS-EI 337
+QV P+ I + RV+ W P K+I+ V N+ QV+ A +G ++ Y E+ + ++
Sbjct: 378 MQVHPNGIRHIRED--GRVNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQL 435
Query: 338 KQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEP 397
++ + + +VACL I+P+ +++ VG + D + +LSL + C +P
Sbjct: 436 MEVEKQDMSGDVACLAIAPVPEGRQ-----RSRFLVVGSY-DNTIGILSLDP--DDCLQP 487
Query: 398 LGGEII---PRSILM------------TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDK 442
L + + P S+L + + +L L +G +F ++D +G+L+D
Sbjct: 488 LSVQSVSSAPESLLFLEVQASVGGEDGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDT 547
Query: 443 KKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAES 502
+ LG +P L S RP + Y + + ++ + S +++
Sbjct: 548 RSRFLGLRPPKLFPCIVSHRQAKLCLSSRPWLGYIHQGHFLLTPLSCDTLESASSFSSDQ 607
Query: 503 YPDS-LALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
+ +A+A D+ F T++ + + + T+PL PR+ + VI
Sbjct: 608 CSEGVVAVAGDALRIF-TVERLGETFNETTIPLRYTPRKFVILPKKKYIPVI 658
>gi|356570929|ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799711 [Glycine max]
Length = 1258
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 194/473 (41%), Gaps = 81/473 (17%)
Query: 106 FSVKEPKVELLGEI--SIP-ECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVME 162
F+ + PKV L + +P + L +++ G + +GD ++KL E+G +
Sbjct: 406 FNSEGPKVNLSECLYKGLPCKALLWVEGGYLAALVEMGDGMVLKL-----EDGR-LCYTN 459
Query: 163 SFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEE-HACIDL-PGIKG 220
N+API+DM VVD + Q+ C G EGSLRIIRNGI +E H + G+ G
Sbjct: 460 PIQNIAPILDMEVVDYHDEKHDQMFACCGVAPEGSLRIIRNGINVENLHRTASIYQGVSG 519
Query: 221 IWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVL 280
W + + + + LVLSF+ TR+L++ + + T+ GF + T CG V ++
Sbjct: 520 TWTVRMKVTDSHHSFLVLSFLDETRILSVGLSFTDVTDSVGFQPNVCTLACGLVTDGLLV 579
Query: 281 QVTPSAA--ILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIK 338
Q+ S L + S + V W G I+VV+C + G V I
Sbjct: 580 QIHRSTVKLCLPTKASHSEVEIWFFAPGGGITVVACGTISLTNTIG------SVKSDSIP 633
Query: 339 Q---LAHRALEYEVACLDISPLSNEETSSEPAKAQ--------LAAVGLWTDISA---RL 384
Q L Y +A L L E +EP + L++ L ++ +
Sbjct: 634 QDVRLVSADKYYVLAGLRNGMLLRFEWPAEPCPSSPINMVDTALSSTNLVNSVTNAFDKR 693
Query: 385 LSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKK 444
LPS+ ++ I R I +T LV LGD D
Sbjct: 694 NDLPSMLQL--------IAIRRIGITPI-----FLVPLGD--------------TLDADI 726
Query: 445 VTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYP 504
+ L +P +L + R L +++++ + H+ ++ +P
Sbjct: 727 IVLADRPWLLHSAR---------------------QGLSYTSISFQPATHVTPVSCVEFP 765
Query: 505 DSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
+ +++ + ++L+++ L PR++ Y + S+ V+ T ++
Sbjct: 766 KGILFVAENSLHLVEMGHGKRLNVQKFHLEGTPRKVLYHDESKMLLVMRTELN 818
Score = 43.1 bits (100), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEE-HACIDL-PGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLRIIRNGI +E H + G+ G W + + + + LVLSF+ TR+L++
Sbjct: 492 EGSLRIIRNGINVENLHRTASIYQGVSGTWTVRMKVTDSHHSFLVLSFLDETRILSV 548
>gi|356505471|ref|XP_003521514.1| PREDICTED: uncharacterized protein LOC100806799 [Glycine max]
Length = 1278
Score = 89.7 bits (221), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 200/484 (41%), Gaps = 97/484 (20%)
Query: 106 FSVKEPKVELLGEI--SIP-ECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVME 162
F + PKV L + +P + L ++++G + +GD ++KL D Y++ ++
Sbjct: 406 FDSEGPKVNLSECLYKGLPCKALLWVESGYLAALVEMGDGMVLKLE---DGRLCYINPIQ 462
Query: 163 SFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEE-HACIDL-PGIKG 220
N+API+DM VVD + Q Q+ C G EGSLRIIRNGI +E H + G+ G
Sbjct: 463 ---NIAPILDMEVVDYHDEKQDQMFACCGVAPEGSLRIIRNGINVENLHRTASIYQGVTG 519
Query: 221 IWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVL 280
W + + + + LVLSFV TR+L++ + + T+ GF + T CG V ++
Sbjct: 520 TWTVRMRVTDSHHSFLVLSFVEETRILSVGLSFTDVTDSVGFQPNVCTLACGLVTDGLLV 579
Query: 281 QVTPSAAILISTESKAR--------VSSWEPPNGKSISVVSCN----KNQVLCA-TGC-- 325
Q+ S L A V W G I+VV+C N V A +GC
Sbjct: 580 QIHKSTVKLCLPTKAAHSEGIPLPSVEIWYFAPGGGITVVACGTISLTNTVGTAISGCVP 639
Query: 326 -DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQ--------LAAVGL 376
DV +L Y +A L L E +EP + L+++ L
Sbjct: 640 QDV-----------RLVFVGKYYVLAGLRNGMLLRFEWPAEPCPSSPINIVDTALSSINL 688
Query: 377 WTDISA---RLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLD 433
++ + PS+ ++ I R I +T LV LGD
Sbjct: 689 VNSVTNAFDKRNDFPSMLQL--------IAIRRIGITPV-----FLVPLGD--------- 726
Query: 434 PASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVN 493
D +TL +P +L + R H L +S+++ +
Sbjct: 727 -----TLDADIITLSDRPWLLHSAR---------------------HSLSYSSISFQPST 760
Query: 494 HMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553
H+ + + P + +++ + ++L+++ L PR++ Y + S+ V+
Sbjct: 761 HVTPVCSVECPKGILFVAENSLHLVEMVHSKRLNMQKFHLEGTPRKVLYHDESKMLLVMR 820
Query: 554 TRID 557
T ++
Sbjct: 821 TELN 824
Score = 43.5 bits (101), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEE-HACIDL-PGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLRIIRNGI +E H + G+ G W + + + + LVLSFV TR+L++
Sbjct: 492 EGSLRIIRNGINVENLHRTASIYQGVTGTWTVRMRVTDSHHSFLVLSFVEETRILSV 548
>gi|342888540|gb|EGU87812.1| hypothetical protein FOXB_01669 [Fusarium oxysporum Fo5176]
Length = 1408
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/518 (20%), Positives = 207/518 (39%), Gaps = 62/518 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFS--VKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G L L + + +G+ + V+ K++ + + L L G +FV +
Sbjct: 647 FLLQTEDGDLLKLTFDMHDS-EGSLAGEVRRIKIKYFDTVPVASSLCILKTGFLFVAAEF 705
Query: 140 GDSQLVKLNR----------------SPDENGTY------------VSVMESFTNLAPII 171
G+ ++ + S G Y ++++ES +L+P++
Sbjct: 706 GNHHFYQIEKLGEDDDAEPVITSDDFSTGPRGAYQPVYFDPRPLKNLALLESIDSLSPLL 765
Query: 172 DMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPK 230
D V D +G Q+ + SG ++++G+ I + A DLPG + G+W +
Sbjct: 766 DCEVADPTGEGPPQIYSESGNGARSHFWMLKHGLEINKVASSDLPGTVSGVWTTRMTRHD 825
Query: 231 NLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILI 290
D+ ++L+ T V+++ G EVE+ GF + T + ++Q+ I
Sbjct: 826 KFDSYIILTSSDGTVVMSV-GDEVEQVSDSGFLTTVTTLAIQQIGDDGIVQIHSKG---I 881
Query: 291 STESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEV--HGSEIKQLAHRALEY 347
+++ W P +SI V+ NK Q+ A + ++ Y EV GS + + +
Sbjct: 882 RHLRAGQINEWPAPQHRSIVAVTTNKRQIAIALSSGEIVYFEVDSDGSLAEYDETKVIST 941
Query: 348 EVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--------PSLEEVCKEPLG 399
V CL + P+ ++ L VG D + R+L L S++ + P
Sbjct: 942 TVTCLSLGPVPEGRL-----RSPLLVVGC-EDCTVRILGLNPDSMLESNSIKTLTAVPSA 995
Query: 400 GEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459
I+ +T G C L + L G ++ +G L+D + LG + L
Sbjct: 996 LIIMAMEHPLTSSSGLC-LHIGLSSGVYLRTGMNEITGELSDTQTRFLGLKAIKLFQVTV 1054
Query: 460 LSTTNVFACSDRPTVIY-SSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFG 518
T V A +P + Y + + +++ S ++E + + +A + F
Sbjct: 1055 KGQTCVLALGSKPWMGYIDPKRGFTMTPLECEELHWASSFSSEQCQEGI-IAIHANFLH- 1112
Query: 519 TIDEIQKLH----IRTVPLGEAPRRIAYQESSQTFGVI 552
I ++ LH +++PL PR + F I
Sbjct: 1113 -IFSVENLHNNVVRKSIPLTYTPRHFVKHPAEPYFYTI 1149
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 93/207 (44%), Gaps = 7/207 (3%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRI 1064
IID ++L L E A+S+ + F +D + ++GT +++P ++ +
Sbjct: 1196 IIDPIGEQVLQRIDLEGNEAAISIAVAPFTSQDGEIFLLVGTGKDMILNPRQSSGGYIHV 1255
Query: 1065 IIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNN 1124
FH + +LQ I + +++ ++ F +L + + +++ ++ LR
Sbjct: 1256 YRFHQNGRELQFIHKTKVEEPPMALVAFRDRLAVGLGKDLCIYDLGLKQLLRKAHIEAAP 1315
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
+ + L +GD I+VGD+ + +T++ + E D W T ++D E +G
Sbjct: 1316 QLIVSLDTQGDRIVVGDVQQGMTMVMFNHEEQRLIPFVDDIIARWTTCTTMVDYESVVGG 1375
Query: 1185 ENSYNLFIC---QKDSAATSDEDRTHL 1208
+ N++I +K S D R +L
Sbjct: 1376 DKFGNIWIVRCPKKTSHHVGDYARNYL 1402
>gi|118400837|ref|XP_001032740.1| CPSF A subunit region family protein [Tetrahymena thermophila]
gi|89287084|gb|EAR85077.1| CPSF A subunit region family protein [Tetrahymena thermophila
SB210]
Length = 1197
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 181/424 (42%), Gaps = 45/424 (10%)
Query: 161 MESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP-GIK 219
++S NL+ I D+ V DL +G Q+ +LRI+R+G+ + E+A LP
Sbjct: 395 VDSLDNLSAISDIKVNDLTGEGNPQIYALCAAGSRSTLRILRHGLQVSEYATSRLPLRPN 454
Query: 220 GIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTV 279
GIW + + L +VLS T VL++ + ++ QT + G ++ +
Sbjct: 455 GIWTIKQRHDEGLTKYIVLSSSKKTYVLSIKDT-ISAVNDSSLDTNSQTLHAGILENNCI 513
Query: 280 LQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-------TGCDVYYLEV 332
+QVTP + I RV+ ++ + K + S N Q+ A G D+ Y E
Sbjct: 514 IQVTPESFRQIRDN---RVTLYKTESNKFVKACS-NSRQIALALQGGQGQPGGDIIYFEF 569
Query: 333 H-GSEIKQLAHRA-LEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS- 389
G ++K++ +A L ++ C+DI E K + AVG D + R+LSL
Sbjct: 570 DLGGQLKRIEEKAKLTSDIECIDIG-----EVPIGRPKFKFLAVGC-KDQTVRILSLEQD 623
Query: 390 --LEEVCKEPLGGEIIPRSILMT-----------CFEGHCYLLVALGDGSMFYFSLDPAS 436
L+ + + L G IP S+ + E YL V L +G + ++D +
Sbjct: 624 QYLQRLSLQALPG--IPESVSLIEMKRGTGTEQEAEEYQLYLFVGLQNGILLRATVDQVT 681
Query: 437 GRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYS--SNHKLVFSNVNLRQVNH 494
G L+D + L P + + A S RP + Y+ +++V + ++ +
Sbjct: 682 GSLSDVRTRVLSAAPIRTCKYVVQGQPALLALSTRPWICYTYLGKYQMVPISYDMLEYAA 741
Query: 495 MCSLNAESYPDSLALATDSTFTFGTIDEIQK----LHIRTVPLGEAPRRIAYQESSQTFG 550
N + ++T I E QK L+ + + L +PR++A E S
Sbjct: 742 PAVFNMQGEQKQCIVSTSGESV--RIIEPQKYGDLLNQQVIKLRYSPRKMAIHERSHNIV 799
Query: 551 VITT 554
+I +
Sbjct: 800 LIES 803
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA---VVHPEENEPKQGRII 1065
I+D T + L+ ++L E+ALS+ F TY +GT VHP N I
Sbjct: 849 IVDPVTRKTLNIYELENNEHALSMCMVNFDNKDETYVCVGTVKDYQVHPNRNF-SVCYIN 907
Query: 1066 IFHYDD--GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW-----TNEKELRLE 1118
F ++ L+ + + EI ++ GKLLA + +R +E + E++
Sbjct: 908 TFQLNEKLNTLELLHKTEIFEIPGALHAHKGKLLAGCGTFLRYYELGKKKLLKKAEIKGL 967
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
S N I GD I V + S+ +L+Y++ + +F E+ D P WM+S ++LD
Sbjct: 968 QSPVNGIQTF-----GDRIYVSMVADSVHVLKYRSKDQTFYEVCDDILPRWMSSFQVLDY 1022
Query: 1179 ELFLGAENSYNLFICQKDSAA 1199
++G + N F+C+ S A
Sbjct: 1023 HTYIGGDKFENAFVCRVPSNA 1043
>gi|71028348|ref|XP_763817.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350771|gb|EAN31534.1| hypothetical protein TP04_0182 [Theileria parva]
Length = 1231
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 198/479 (41%), Gaps = 67/479 (13%)
Query: 91 LFMLLLEK-------EEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQ 143
F+LLL + E D T +V E V + + + L +G +FVGS GD +
Sbjct: 301 FFILLLSEYGDLYKIELSHDDT-TVSEIVVRYFDTVDVASTMCILRSGYLFVGSESGDHK 359
Query: 144 LVKLNR-------------SPDENGTYVS----------VMESFTNLAPIIDMVVVDLER 180
L + PD ++ V++ ++A +DM VVD+
Sbjct: 360 LYQFTALENGDKDVICTSLHPDAKNAIIAFKPRKLQNLAVVDRMNSMALAVDMKVVDVLG 419
Query: 181 QGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLS 239
+ G + + L+ +R G EE A +LPG K ++ + N D +++S
Sbjct: 420 LNNYDIFVACGRWYDSRLKCLRYGFNTEELAFNELPGRPKAVFTIK-SLESNYDEYIIIS 478
Query: 240 FVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRT-------VLQVTPSAAILIST 292
F G+T VL++ G VEE F + T + ++ + +QV ++
Sbjct: 479 FQGNTLVLSI-GEAVEEVTDSFFLTSITTLHSCHMGSTSGSVGGGIFVQVHDGGFRYLTG 537
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQ-VLCATGCDVYYLEVHGSEIKQL---AHRALEYE 348
+ V W+ K + + N Q VL TG +V Y ++ +++ +L R L E
Sbjct: 538 DV---VKEWKVQTTKRVKLADNNNTQLVLVLTGGEVIYFQLTEADVLELVEVGRRNLSTE 594
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVC-KEPLGGEIIPRSI 407
V CL + + KA+ G +I R++ L ++C + LG +P S+
Sbjct: 595 VTCLAV------QHQVSGNKAEFCCCGSIDNI-VRVMKLDKTLKLCSSQILGNNSLPESV 647
Query: 408 -LMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVF 466
L+T YL V L +G + ++D A G L+D++ LG +P LK + L +
Sbjct: 648 ALLTTSVDELYLYVGLNNGVLIRNTVDVA-GNLSDQESRFLGAKPLRLKLVQYLDRQCLL 706
Query: 467 ACSDR-----PTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTI 520
+ + P S N L V + N +L+ P + L+ DS TF ++
Sbjct: 707 LLTVKTFIVVPNYPTSGNGNLEILPVYINSTNATVTLS----PSNAMLSVDSIDTFNSL 761
Score = 41.2 bits (95), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 18/154 (11%)
Query: 1057 NEPKQGRIIIFHYDDG-----------KLQQIAEKEIKGACYSMCEFNGKLLASINSTVR 1105
N+ + I ++ YD KL + + C++ E N LL +I S +R
Sbjct: 941 NDEVESSIRVYEYDSNYANLGNTGFSIKLLHVTNTKGWIRCFNNYE-NKLLLCAIGSKLR 999
Query: 1106 LFEWTNEKELRLECSHFNNIIALFLKVK--GDFILVGDLMRSLTLLQYKTME---GSFEE 1160
++ K++ L+ H + F+ +K G I GD+ S+ LL+ K G FE
Sbjct: 1000 MYAL-GRKQMLLKGEHRSLTSNGFMDIKVVGSRIYCGDIRESVQLLRLKFYGEDLGEFEL 1058
Query: 1161 ISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ 1194
+ P W++++E+LD + + +LF+ +
Sbjct: 1059 TTTSTGPRWLSTMELLDYSTVIAGDKFDSLFVSR 1092
>gi|219110831|ref|XP_002177167.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411702|gb|EEC51630.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1303
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 179/419 (42%), Gaps = 43/419 (10%)
Query: 161 MESFTNLAPIIDMVVVDLE-RQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK 219
+ S N +P ++V +L + Q+ +G +LR+ R+G + E A +LPG+
Sbjct: 466 IHSLDNPSPTTGVLVGELAGNEVSPQIYALTGSGPTSALRVTRHGASVTELAVSELPGVP 525
Query: 220 G-IWALSIGSP---KNLDNTLVLSFVGHTRVLTLSGAEVEET-EMGGFTSDQQTFYCGNV 274
G I+ + G+ K LD +V+SF T VL++ G VEE + GF ++ T C +
Sbjct: 526 GAIFTIGTGNTAGGKKLDQFIVVSFADATLVLSV-GETVEEVGKESGFLTNSPTLACSAL 584
Query: 275 DPRTVL-QVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEV 332
L QV P I + W P K I S N++QV+ A G ++ Y E+
Sbjct: 585 GSDGALCQVHPVGVRHI---QNGQAKQWHCPGLKRIECASANESQVIVALAGGEIIYFEL 641
Query: 333 H--GSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL-PS 389
+ + A R + +V CLD+ + + S L AV D + R++SL P
Sbjct: 642 DPMSGNLMESATREMGADVCCLDVGTIPKGRSRS------LFAVVGCRDQTVRVISLEPD 695
Query: 390 LEEVC--KEPLGGEIIPRSILMTCFEG----------HCYLLVALGDGSMFYFSLDPASG 437
++ + + P S+ + L++ L DGS S+DP +G
Sbjct: 696 KTKILSQRSSTALKARPHSVALQMMNAGVANSNANVDDLTLIIGLDDGSSLRASIDPITG 755
Query: 438 RL-TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIY--SSNHKLVFSNVNLRQVNH 494
+ T + LG +P + S S RP + +++ K + + ++ ++H
Sbjct: 756 SIGTSPTRRFLGARPVAVSRISLESNPATLLLSSRPWITRRDAASGKHIMAPLSYAPLDH 815
Query: 495 MCSLNAESYPDSLALATDSTFTFGTID-------EIQKLHIRTVPLGEAPRRIAYQESS 546
CS ++++ + + T +I+ + + + +PL PR++ ++
Sbjct: 816 GCSFSSDAVSEGIVATAGKTLRILSIESSGMEGGDDEAFNTNKIPLRYTPRQMTLMSAT 874
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 14/179 (7%)
Query: 1008 LIIDQNTFEILHAHQLFPGEYALSLISSKF---GEDPNTYFVLGTAV---VHPEENEPKQ 1061
L+ N+ L ++ E AL S +F G +P +GT +HP + +
Sbjct: 956 LLDPSNSCTTLDCIEMGRNEAALCCASVRFHSKGGEP--LLAVGTVTGMTMHPLKQDSSH 1013
Query: 1062 GRIIIFHYDDGKLQQIAEKEI--KGACYSMCEFNGKLLASINSTVRLFEWTNEKELRL-E 1118
I+I+ +G Q+ + G S+ F G+LL I +T+RL+E + LR E
Sbjct: 1014 --IVIYRIVNGDRFQLLHRTSVDDGPVLSLAHFQGRLLVGIGTTLRLYEMGKRQLLRKSE 1071
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILD 1177
+F + V G+ +GD+M+S+ +++Y I+ D +P + E+LD
Sbjct: 1072 LRNFPTFVKTVQTV-GERAYIGDMMQSIQIVRYDVSANRLVLIANDASPRPIVCQELLD 1129
>gi|134106833|ref|XP_777958.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260658|gb|EAL23311.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1218
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 111/482 (23%), Positives = 185/482 (38%), Gaps = 53/482 (10%)
Query: 112 KVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTY-------------- 157
K++ + + L L G ++V S D L + +++G
Sbjct: 345 KIKYFDTVPVANSLCILKRGYIYVASEFSDQNLYQFQSLAEDDGEQEWSSTDYPENGNID 404
Query: 158 ---------------VSVMESFTNLAPIIDMVVVDL--ERQGQGQLVTCSGGFKEGSLRI 200
+ ++++ +L PI D VV+L Q+ G + R
Sbjct: 405 GPLPFAFFDPQPLRNLLLVDTVPSLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRT 464
Query: 201 IRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
+++G+ + E LPG+ +W L + VLSF T VL++ G +EE
Sbjct: 465 LKHGLDVAEMVSSPLPGVPTNVWTLKLTED-------VLSFPNGTLVLSI-GETIEEVND 516
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF S T + +LQV P L + RV W P G++I + N+ QV
Sbjct: 517 TGFLSSGPTLAVQQLGNAGLLQVHPYG--LRHIRAADRVDEWPAPPGQTIVAATTNRRQV 574
Query: 320 LCA--TGCDVYY-LEVHGSEIKQLAHRALEYEVACLDIS--PLSNEETSSEPA---KAQL 371
+ A T VY+ L+ GS + +AL C+ I+ P TS +
Sbjct: 575 VIALSTAELVYFELDPEGSLSEYQEKKALPGNATCVTIAEVPEGRRRTSFLAVGCDNQTV 634
Query: 372 AAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFS 431
+ + L D + LSL +L EI SI +L + L +G +
Sbjct: 635 SIISLEPDSTLDTLSLQALTAPPTSICLAEIFDTSIDKN--RATMFLNIGLMNGVLLRTV 692
Query: 432 LDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQ 491
+DP G L+D + LG +P L +V A S R ++Y+ L +
Sbjct: 693 VDPVDGSLSDTRLRFLGAKPPKLVRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYDT 752
Query: 492 VNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGEAPRRIAYQESSQTFG 550
+ + SL+A PD L + +T I ++ +KL + L PR+ + F
Sbjct: 753 LEYAWSLSAAMCPDGLIGISGNTLRIFNIPKLGEKLKQDSTALTYTPRKFISHPFNSVFY 812
Query: 551 VI 552
+I
Sbjct: 813 MI 814
Score = 45.1 bits (105), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 1060 KQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLEC 1119
+QGRI+ F L + +I + F G LLA I ++RL+E + LR +C
Sbjct: 932 EQGRILEF------LHKTKTDDIP---LCLAGFQGFLLAGIGKSLRLYEMGKKALLR-KC 981
Query: 1120 SHFNNIIALF-LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEI-SRDYNPNWMTSIEILD 1177
+ A+ + V+G I+VGD+ S Y+++ I + D P W+T + +D
Sbjct: 982 ENNGFPTAVVTINVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVD 1041
Query: 1178 DELFLGAENSYNLFICQKDSAATS--DEDRT 1206
E + N+FI + D + + D+D T
Sbjct: 1042 YETVACGDKFGNIFINRLDPSISEKVDDDPT 1072
>gi|339259094|ref|XP_003369733.1| splicing factor 3B subunit 3 [Trichinella spiralis]
gi|316965959|gb|EFV50595.1| splicing factor 3B subunit 3 [Trichinella spiralis]
Length = 1241
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 116/519 (22%), Positives = 213/519 (41%), Gaps = 76/519 (14%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVV--FVGSRL 139
+LL G +F + LE + + V E K++ + + + L +G + + ++L
Sbjct: 345 FLLQTEQGDIFKVTLEVFDDI-----VTEIKIKYFDTLPVANSICMLKSGFLNLYQIAKL 399
Query: 140 GD-------SQLVKLNRSPDENGTYVSVMESFTNL---------APIIDMVVVDLERQGQ 183
GD S L+ L DE T+ NL +PI+ V D+ +
Sbjct: 400 GDNDDETEFSSLMPL----DEGDTFFFAPRGLQNLIQVDELLSLSPIMSFEVADIVYEDT 455
Query: 184 GQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVG 242
QL G S++++R+G+ + E A +LPG +W + D +V+SFV
Sbjct: 456 PQLYAACGRGPRSSIKVLRHGLEVTEMAISELPGNPNAVWTVKKHQDAEYDAYIVVSFVN 515
Query: 243 HTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWE 302
T VL++ G VEE + G VD +Q+ P I + RV+ W+
Sbjct: 516 ATLVLSI-GETVEEV--------TDSVVLGVVD----VQIYPEGIRHIRCDR--RVNEWK 560
Query: 303 PPNGKSISVVSCNKNQVLCA-TGCDVYYLEV-HGSEIKQLAHRALEYEVACLDISPLSNE 360
P + I+ + N QVL A G ++ Y E+ G ++ + R E+ C D+ ++
Sbjct: 561 VPGRRVITNCAVNCRQVLIALNGGEIVYFELDEGGQLNEYTERK---EMPC-DVVAMALA 616
Query: 361 ETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTC--------F 412
+ + + AV L TD + R++SL + C PL + +P C
Sbjct: 617 DIPPGEIRCRFLAVAL-TDRTVRVISLDPSD--CLTPLNMQSLPAMAQSLCIAAVGGDTM 673
Query: 413 EGHCYLLVAL-----GDGSMFYFSLDPASGRLTDKKKVTLGTQPTVL---KTFRSLSTT- 463
E +L + L +G + LD +G L D + LG +P L K +++
Sbjct: 674 ESTLFLNIGLEVNKFTNGVLLRTVLDSVTGELQDTRTRYLGMKPVKLFKVKMHDNIAVMN 733
Query: 464 ----NVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
N+ A S R ++Y + + ++ + + + ++ P+ + ++
Sbjct: 734 SVQLNIIAMSSRAWLLYKYQTRYHLTPLSYIPLEYASNFASDQCPEGVVAIAGNSLRILA 793
Query: 520 IDEIQKL-HIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
I+ + + + + L PRR + +T +IT D
Sbjct: 794 IENLGTIFNYSSFQLSHTPRRFVFH--PETGNIITVETD 830
Score = 48.9 bits (115), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLK 1131
+L+ + + A ++ F G+LLAS +R+++ +K LR E H N+I L
Sbjct: 970 RLEMMHRTTVDEAVTALASFRGRLLASAGKMLRIYDLGKKKLLRKCENKHMPNLITHILT 1029
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILD 1177
+ G I VGD+ S+ +YK +E + D + + +++ ILD
Sbjct: 1030 M-GHRIFVGDVQESVFFYRYKPIENQLVVFADDTHQRFCSAMCILD 1074
>gi|350645868|emb|CCD59413.1| Splicing factor 3B subunit 3, 5' fragment [Schistosoma mansoni]
Length = 1073
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 147/348 (42%), Gaps = 37/348 (10%)
Query: 233 DNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
D +++SFV T VL++ G VEE GF T C + ++QV P I
Sbjct: 434 DAYIIVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHI-- 490
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEV 349
S RV+ W P K+I+ + N+ QV+ A TG ++ Y E+ G + + + +V
Sbjct: 491 RSDKRVNVWRAPGKKTITKCAVNRRQVVIALTGGELVYFEMDMTGQLNEYTERKEMPADV 550
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILM 409
C+ + + E +++ AVGL D + R+LSL + C PL + IP +
Sbjct: 551 ICMALGRIPANEQ-----RSRFLAVGL-ADNTVRILSLDPSD--CLTPLTMQGIPSTPES 602
Query: 410 TCF----------------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTL 447
C G Y+ + L +G + LDP +G L+D + L
Sbjct: 603 LCIVEMGTNEPSPSTDDGESEATSSGGILYMNIGLINGVLLRVILDPVTGELSDTRTRYL 662
Query: 448 GTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSL 507
GT+P L V + S R + Y+ ++ ++ + + ++E P+ +
Sbjct: 663 GTRPVKLFRIMMQGGEAVLSVSSRSWLSYAYQNRFHLIPLSYEALEYASGFSSEQCPEGI 722
Query: 508 ALATDSTFTFGTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITT 554
+++ ++++ + + + PL PR+ + S +I T
Sbjct: 723 VAICNNSLRIMALEKLGAVFNQISYPLQYTPRKFVFHPDSNITYIIET 770
Score = 40.4 bits (93), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ---GRIII 1066
+D +T +I+ Q E A +L KF P F++ A+V P+ G +
Sbjct: 843 LDGSTCQIIRFPQ---NEAAHALTFVKFNNHPAEQFLV-VALVKDLILNPRSCSGGCLKT 898
Query: 1067 FH-YDDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW-TNEKELRLECSHFN 1123
+ +++G +L+ + E + ++C F G+LL + + +R+++ + + E H
Sbjct: 899 YRIWNNGERLEFLHETPVDDFPAALCAFQGRLLVGVGNRLRIYDLGKKKLLKKCENKHIP 958
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEI-SRDYNPNWMTSIEILD 1177
+I V G I+V D+ S+ ++Y+ S I + D NP W+ + +LD
Sbjct: 959 TLINGIYSV-GSRIIVTDVQESVHWVRYRPRSDSQLVIFADDTNPRWIIHLAVLD 1012
>gi|256075924|ref|XP_002574265.1| Splicing factor 3B subunit 3 5' fragment [Schistosoma mansoni]
Length = 982
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 147/348 (42%), Gaps = 37/348 (10%)
Query: 233 DNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
D +++SFV T VL++ G VEE GF T C + ++QV P I
Sbjct: 434 DAYIIVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHI-- 490
Query: 293 ESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH--GSEIKQLAHRALEYEV 349
S RV+ W P K+I+ + N+ QV+ A TG ++ Y E+ G + + + +V
Sbjct: 491 RSDKRVNVWRAPGKKTITKCAVNRRQVVIALTGGELVYFEMDMTGQLNEYTERKEMPADV 550
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILM 409
C+ + + E +++ AVGL D + R+LSL + C PL + IP +
Sbjct: 551 ICMALGRIPANEQ-----RSRFLAVGL-ADNTVRILSLDPSD--CLTPLTMQGIPSTPES 602
Query: 410 TCF----------------------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTL 447
C G Y+ + L +G + LDP +G L+D + L
Sbjct: 603 LCIVEMGTNEPSPSTDDGESEATSSGGILYMNIGLINGVLLRVILDPVTGELSDTRTRYL 662
Query: 448 GTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSL 507
GT+P L V + S R + Y+ ++ ++ + + ++E P+ +
Sbjct: 663 GTRPVKLFRIMMQGGEAVLSVSSRSWLSYAYQNRFHLIPLSYEALEYASGFSSEQCPEGI 722
Query: 508 ALATDSTFTFGTIDEIQKLHIR-TVPLGEAPRRIAYQESSQTFGVITT 554
+++ ++++ + + + PL PR+ + S +I T
Sbjct: 723 VAICNNSLRIMALEKLGAVFNQISYPLQYTPRKFVFHPDSNITYIIET 770
>gi|315053737|ref|XP_003176243.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
gi|311338089|gb|EFQ97291.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
Length = 1181
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 111/509 (21%), Positives = 190/509 (37%), Gaps = 76/509 (14%)
Query: 82 YLLGDLAGRLFMLLLE--KEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + +E ++E + T VK K++ + + L L +G +FV S
Sbjct: 306 FLLQSEDGDLFKVTMEMVEDENENATGEVKRLKLKYFDTVPLASSLCILKSGFLFVASET 365
Query: 140 GDSQLVKLNRSPDEN---------------------------GTYVSVMESFTNLAPIID 172
G+ + + D++ ++++ES +L P++
Sbjct: 366 GNQHFYQFEKLGDDDDEIEFISDDYSAVISEPLPPVYFRPRPAENLNLVESIASLNPLMA 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
V ++ + Q+ T G S R +++G+ + E +LP + +W +
Sbjct: 426 ASVTNVTEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLSRNDQ 485
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D +VLSF T VL++ G VEE GF S T + +++QV P I
Sbjct: 486 YDAYIVLSFSNGTLVLSI-GETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R +
Sbjct: 545 ADQ--RVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGT 602
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSIL 408
V CL + + ++ P VC P +
Sbjct: 603 VTCLSLGEVPKDDVDFCP--------------------------VC---------PIHHV 627
Query: 409 MTCFEGHCYLLVALGDGSMFYFS--LDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVF 466
F +++ +G S Y LD +G L+D + LG +P L + V
Sbjct: 628 HDRFTLRVDVILHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRAVL 687
Query: 467 ACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESYPDSLALATDSTFTFGTIDEI- 523
A S R + YS F+ L V S N +E + + +I+++
Sbjct: 688 ALSSRSWLGYSDLQTKSFTLTPLNYVGLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEKLD 747
Query: 524 QKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
L +PL PR F VI
Sbjct: 748 NNLLQEPIPLAYTPRNFVRHPEYPLFYVI 776
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
NT +L +L E A+S+ + F ++ T+ V+GT VV P I F
Sbjct: 830 NTKSVLSKLELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSPRTYTCGFIHIYRFQ 889
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
+ +L+ I + +++ ++ F G+LLA + +R+++ + LR + + +
Sbjct: 890 EEGKELEFIHKTKVEQPPLALLGFQGRLLAGVGPDLRIYDLGMRQLLRKCQAQITPRVIV 949
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK E + + D W T ++D E G +
Sbjct: 950 GLQTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIISRWTTCTTMVDYETVAGGDKFG 1009
Query: 1189 NLFI--CQKDSAATSDED 1204
N+++ C ++ +DED
Sbjct: 1010 NIWLLRCPTKASEEADED 1027
>gi|320164105|gb|EFW41004.1| splicing factor 3B subunit 3 [Capsaspora owczarzaki ATCC 30864]
Length = 1218
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 126/549 (22%), Positives = 214/549 (38%), Gaps = 73/549 (13%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDS---QLV 145
G +F + L+ + D S++ ++L + + L L +G +FV + LGD Q+
Sbjct: 315 GDMFKVTLDVAD--DNVVSIR---MKLFDTLPVATSLHILRSGHLFVAAELGDHHLYQIT 369
Query: 146 KLNRSPDE----------NGTYV---------------------------SVMESFTNLA 168
+L + DE NG V VMES A
Sbjct: 370 QLAENDDEPEFTTRGLVMNGRVVPSSVAHGGVELSAFVYTPRPLLNLVLLDVMES---TA 426
Query: 169 PIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK-GIWALSIG 227
P + V DL + Q G +LRI+R+G+ + + A +L IW++
Sbjct: 427 PTMQCRVEDLLGEDAPQFYLLCGRGPNSTLRILRHGLEVSQLAATELTASPVAIWSVKRS 486
Query: 228 SPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAA 287
D ++S+ T VL++ G +V G T + +LQV
Sbjct: 487 IHDIHDTYFIVSWASATVVLSV-GDQVAPVSDSGLLLTVGTIAVSRIGEDDLLQVYTDGI 545
Query: 288 ILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH-GSEIKQLAHR-A 344
I +S RV+ W P + I + N QV+ A G ++ Y E+ ++ + A R
Sbjct: 546 RHIRADS--RVNEWRTPGRRQIVRAAINDRQVVIALAGGELVYFELDITGQLNEFAERFT 603
Query: 345 LEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIP 404
EV L I+P+ + +A+ AV D + R++SL + + + LG + +
Sbjct: 604 SSAEVCALAIAPVPADRR-----RARFLAVAA-EDNTVRIVSLELSDTL--QSLGVQTVA 655
Query: 405 RSILMTCF--------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKT 456
CF L V L +G + S++P+SG LTD + LGT+P +L
Sbjct: 656 DRASSLCFADPSLDNSSADLVLGVGLQNGILLRTSVEPSSGNLTDTRTRYLGTRPVMLFP 715
Query: 457 FRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFT 516
+ A S RP + Y + ++ ++ + +A + P+ L +T
Sbjct: 716 SKVHGAAGFLALSSRPWIFYVQQGTPTLTPLSYDALDCAATFSAANCPNGLVAIAGNTLR 775
Query: 517 FGTIDEIQKLHIRT-VPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQA 575
+ + + +T +PL PRR +S VI A G V +
Sbjct: 776 VLNLPRLGSVFNQTSMPLKYTPRRFIV-DSEHRLLVIAESDHNTFAAGRKAVEQARVAAE 834
Query: 576 QNTTSSTIS 584
NTT + I+
Sbjct: 835 TNTTQAAIA 843
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 1007 LLIIDQNTFEILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTAVVHPEENEPKQGRII 1065
L I+D E L +L E S+ S F G + T+F++GT + QG +
Sbjct: 865 LRIVDAQLRETLELIELDEDEGVFSMTSCSFHGHEGQTFFIVGTTKALNLQTRAHQGGCL 924
Query: 1066 I---FHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHF 1122
F+ +L + E++ +M F G+LL + S +R+++ K LR +C
Sbjct: 925 YTYRFNPQTRRLDFVHRTEVEDVPGAMYPFQGRLLVGVGSLLRVYDLGKRKLLR-KCE-- 981
Query: 1123 NNIIALF---LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE 1179
N I F + G I+V D+ S L+Y+ + + D NP W+TS ++D +
Sbjct: 982 NRSIPNFVSSITTSGGRIVVTDVQESFHFLRYRPSDNMLAVFADDSNPRWVTSSTMVDYD 1041
Query: 1180 LFLGAENSYNLFICQ 1194
+ N+F+ +
Sbjct: 1042 TVAAGDKFGNVFVLR 1056
>gi|336469942|gb|EGO58104.1| pre-mRNA splicing factor RSE1 [Neurospora tetrasperma FGSC 2508]
Length = 1192
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 180/453 (39%), Gaps = 70/453 (15%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E DG T VK K++ I
Sbjct: 297 MHKLKG--SAGAFF------FLLQTDDGDLFKVTIDMIEDSDGNPTGEVKRLKIKYFDTI 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDE-------------------NGTY--- 157
+ L L +G +F S G+ + + D+ N Y
Sbjct: 349 PVATSLCILKSGFLFAASEFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+ ++ES ++ P +D V +L + Q+ + G + R++++G+ + E
Sbjct: 409 RPLENLVLVESIDSMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPG +W T L+ H G VEE GF + T
Sbjct: 469 SELPGTPSAVW------------TTKLTKYDHI------GETVEEVSDSGFLTTAPTLAV 510
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYL 330
+ ++QV P I + RV+ W P +SI + N+NQV+ A + ++ Y
Sbjct: 511 QQMGEDGLIQVHPKG---IRHIVQGRVNEWPAPQHRSIVAATANENQVVIALSSGEIVYF 567
Query: 331 EVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--- 387
E+ LA + E++ ++ LS + ++ AVG D + R+LSL
Sbjct: 568 EMDSD--GSLAEYDEKKEMSGT-VTSLSVGQVPEGLKRSSFLAVGC-DDCTVRILSLDPD 623
Query: 388 PSLEEVCKEPLGGEIIPRSILMT--CFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKK 444
+LE + L SI+ F G YL + L G LD +G LTD ++
Sbjct: 624 STLEMKSIQALTAAPSALSIMSMEDSFGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQ 683
Query: 445 VTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYS 477
LG +PT L V A S RP + Y+
Sbjct: 684 KFLGPKPTKLFQVSVQDQPCVLALSSRPWLGYT 716
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 8/180 (4%)
Query: 1029 ALSLISSKFGEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGA 1085
A+ +S+ GE ++ V+GT V+ P + + FH D L+ I + ++
Sbjct: 867 AIVPFASQEGE---SFLVVGTGKDMVLDPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEP 923
Query: 1086 CYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRS 1145
++ F G+LLA + T+R+++ ++ LR + + + L+ +G+ I+VGDL +
Sbjct: 924 PLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSLQSQGNRIIVGDLQQG 983
Query: 1146 LTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAATSDE 1203
+T + YK + D W T ++D E G + N++I C + + +DE
Sbjct: 984 ITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQETDE 1043
>gi|164429062|ref|XP_957282.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
gi|157072394|gb|EAA28046.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
Length = 1192
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 180/453 (39%), Gaps = 70/453 (15%)
Query: 62 FHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDG--TFSVKEPKVELLGEI 119
H L+G S G+ + +LL G LF + ++ E DG T VK K++ I
Sbjct: 297 MHKLKG--SAGAFF------FLLQTDDGDLFKVTIDMIEDSDGNPTGEVKRLKIKYFDTI 348
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDE-------------------NGTY--- 157
+ L L +G +F S G+ + + D+ N Y
Sbjct: 349 PVATSLCILKSGFLFAASEFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHP 408
Query: 158 -----VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+ ++ES ++ P +D V +L + Q+ + G + R++++G+ + E
Sbjct: 409 RPLENLVLVESIDSMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVA 468
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC 271
+LPG +W T L+ H G VEE GF + T
Sbjct: 469 SELPGTPSAVW------------TTKLTKYDHI------GETVEEVSDSGFLTTAPTLAV 510
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYL 330
+ ++QV P I + RV+ W P +SI + N+NQV+ A + ++ Y
Sbjct: 511 QQMGEDGLIQVHPKG---IRHIVQGRVNEWPAPQHRSIVAATANENQVVIALSSGEIVYF 567
Query: 331 EVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--- 387
E+ LA + E++ ++ LS + ++ AVG D + R+LSL
Sbjct: 568 EMDSD--GSLAEYDEKKEMSGT-VTSLSVGQVPEGLKRSSFLAVGC-DDCTVRILSLDPD 623
Query: 388 PSLEEVCKEPLGGEIIPRSILMT--CFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKK 444
+LE + L SI+ F G YL + L G LD +G LTD ++
Sbjct: 624 STLEMKSIQALTAAPSALSIMSMEDSFGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQ 683
Query: 445 VTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYS 477
LG +PT L V A S RP + Y+
Sbjct: 684 KFLGPKPTRLFQVSVQDQPCVLALSSRPWLGYT 716
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 8/180 (4%)
Query: 1029 ALSLISSKFGEDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGA 1085
A+ +S+ GE ++ V+GT V+ P + + FH D L+ I + ++
Sbjct: 867 AIVPFASQEGE---SFLVVGTGKDMVLDPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEP 923
Query: 1086 CYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRS 1145
++ F G+LLA + T+R+++ ++ LR + + + L+ +G+ I+VGDL +
Sbjct: 924 PLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSLQSQGNRIIVGDLQQG 983
Query: 1146 LTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAATSDE 1203
+T + YK + D W T ++D E G + N++I C + + +DE
Sbjct: 984 ITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQETDE 1043
>gi|296086939|emb|CBI33172.3| unnamed protein product [Vitis vinifera]
Length = 934
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 117/278 (42%), Gaps = 35/278 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE E + E K++ I + + L +G +F S G+
Sbjct: 158 FLLQTEYGDVFKVTLEHEND-----RISELKIKYFDTIPVTSSMCVLKSGFLFAASEFGN 212
Query: 142 S---QLVKLNRSPDENGTYVSVMES----------------------FTNLAPIIDMVVV 176
Q + D + S+ME+ +L PI+DM V
Sbjct: 213 HGLYQFQAIGDDADVESSSASLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPIMDMKVS 272
Query: 177 DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNT 235
+L + Q+ G S+RI+R G+ I E A LPG+ +W + D
Sbjct: 273 NLFEEETPQIFALCGRGPRSSIRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAY 332
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+V+SF T VL++ G VEE GF + + +++QV PS I +
Sbjct: 333 IVVSFANATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED-- 389
Query: 296 ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEV 332
R++ W P ++I V N+ QV+ A +G ++ Y EV
Sbjct: 390 GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEV 427
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 13/213 (6%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLGTAVVHPEENEPKQ- 1061
V + I+D T +L E A S+ + F + + T +GTA + PK+
Sbjct: 580 VSCIRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYGTLLAVGTA--KSLQFWPKRS 637
Query: 1062 ---GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR 1116
G I I+ + +DGK L+ + + +++G ++C+F G+LLA I S +RL++ + LR
Sbjct: 638 FDAGYIHIYRFLEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKRRLLR 697
Query: 1117 -LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEI 1175
E F N I + + D I VGD+ S +Y+ E + D P W+T+
Sbjct: 698 KCENKLFPNTI-VSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYH 756
Query: 1176 LDDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
+D + GA+ N++ + +D + +ED T
Sbjct: 757 IDFDTMAGADKFGNIYFVRLPQDVSDEVEEDPT 789
>gi|358348118|ref|XP_003638096.1| DNA damage-binding protein, partial [Medicago truncatula]
gi|355504031|gb|AES85234.1| DNA damage-binding protein, partial [Medicago truncatula]
Length = 822
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 37/266 (13%)
Query: 118 EISIPECL---------TYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLA 168
++S+ ECL ++ G + +GDS ++KL D + ++++ N+A
Sbjct: 410 KLSLSECLYKGLPCKELLWVKEGYLASIVEMGDSVVLKLK---DGRLCFTNLIQ---NIA 463
Query: 169 PIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEE--HACIDLPGIKGIWALSI 226
PI D+ D + Q+ C G EGSLR+I++GI +E+ G+ G W + +
Sbjct: 464 PIFDVTSGDYHDEKHDQMFACCGVTPEGSLRVIQSGINVEKLLRTPSTYEGVAGTWTVRM 523
Query: 227 GSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSA 286
+ LVLSF+G TR+L++ + + T+ GF + T CG V ++Q+ SA
Sbjct: 524 KISDQYHSFLVLSFLGETRILSVGLSFTDVTDSVGFQPNVCTLACGLVSDGLLVQIYQSA 583
Query: 287 AIL-ISTE---------SKARVSSWEPPN--------GKSISVVSCNKNQVLCATGCDVY 328
L + T+ S +SW P N G + VVS + L G V
Sbjct: 584 VKLCLPTKDGHSEGIPLSSPICTSWYPDNLNISLGAVGHNFIVVSTSNPCFLFILG--VR 641
Query: 329 YLEVHGSEIKQLAHRALEYEVACLDI 354
L + EI ++ H L+ EV+C+ I
Sbjct: 642 MLSAYQYEIYEMQHLELQNEVSCISI 667
Score = 41.2 bits (95), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLR+I++GI +E+ G+ G W + + + LVLSF+G TR+L++
Sbjct: 490 EGSLRVIQSGINVEKLLRTPSTYEGVAGTWTVRMKISDQYHSFLVLSFLGETRILSV 546
>gi|358348106|ref|XP_003638090.1| DNA damage-binding protein, partial [Medicago truncatula]
gi|355504025|gb|AES85228.1| DNA damage-binding protein, partial [Medicago truncatula]
Length = 642
Score = 84.0 bits (206), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 37/266 (13%)
Query: 118 EISIPECL---------TYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLA 168
++S+ ECL ++ G + +GDS ++KL D + ++++ N+A
Sbjct: 230 KLSLSECLYKGLPCKELLWVKEGYLASIVEMGDSVVLKLK---DGRLCFTNLIQ---NIA 283
Query: 169 PIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEE--HACIDLPGIKGIWALSI 226
PI D+ D + Q+ C G EGSLR+I++GI +E+ G+ G W + +
Sbjct: 284 PIFDVTSGDYHDEKHDQMFACCGVTPEGSLRVIQSGINVEKLLRTPSTYEGVAGTWTVRM 343
Query: 227 GSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSA 286
+ LVLSF+G TR+L++ + + T+ GF + T CG V ++Q+ SA
Sbjct: 344 KISDQYHSFLVLSFLGETRILSVGLSFTDVTDSVGFQPNVCTLACGLVSDGLLVQIYQSA 403
Query: 287 AIL-ISTE---------SKARVSSWEPPN--------GKSISVVSCNKNQVLCATGCDVY 328
L + T+ S +SW P N G + VVS + L G V
Sbjct: 404 VKLCLPTKDGHSEGIPLSSPICTSWYPDNLNISLGAVGHNFIVVSTSNPCFLFILG--VR 461
Query: 329 YLEVHGSEIKQLAHRALEYEVACLDI 354
L + EI ++ H L+ EV+C+ I
Sbjct: 462 MLSAYQYEIYEMQHLELQNEVSCISI 487
Score = 40.8 bits (94), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLR+I++GI +E+ G+ G W + + + LVLSF+G TR+L++
Sbjct: 310 EGSLRVIQSGINVEKLLRTPSTYEGVAGTWTVRMKISDQYHSFLVLSFLGETRILSV 366
>gi|353442065|gb|AER00318.1| xeroderma pigmentosum group E, partial [Hydra vulgaris]
Length = 156
Score = 83.2 bits (204), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 44/50 (88%)
Query: 1167 PNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
PNWMT++EI+DD+ FLGAENS+NLFICQKD+++ +DE+R HLQ +G HL
Sbjct: 1 PNWMTAVEIIDDDTFLGAENSFNLFICQKDNSSVNDEERHHLQTIGKYHL 50
>gi|406700450|gb|EKD03620.1| hypothetical protein A1Q2_02097 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1119
Score = 83.2 bits (204), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 109/246 (44%), Gaps = 54/246 (21%)
Query: 83 LLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVEL--LGEISIPECLTYLDNGVVFVGSRLG 140
LLGD GRL + E E+ +++ +V + +G +S P LTYLDNG +F S G
Sbjct: 291 LLGDEYGRLTAVGWEFED-------MEKVQVGMIDMGVVSAPSSLTYLDNGYLFSASACG 343
Query: 141 DSQLVKL-------NRSP-----------DENGTY-----------VSVMESFTNLAPII 171
DS LV L R P + G Y V V E + N+AP
Sbjct: 344 DSLLVYLVLPSPNSTRQPSGKGKEKAHDISDAGAYEIVTAEPQHGRVDVRERWMNIAPAK 403
Query: 172 DMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPK 230
D +V + +V SG S R++R+G+G E I ++PGI+ +W + P
Sbjct: 404 DFAIVKEDDGRVSHVVVASGSASSNSFRVVRSGVGFENLMTIEEIPGIERMWTI----PA 459
Query: 231 NLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQ-----TFYCGNVDPRTVLQVTPS 285
+L++SF T +L L E E+ F + Q TF G VD +LQVTP
Sbjct: 460 ADGPSLLVSFAYSTTILQL------EPEVSVFKAADQVTAVPTFAAGLVDKSLLLQVTPE 513
Query: 286 AAILIS 291
L S
Sbjct: 514 GIRLWS 519
>gi|401882870|gb|EJT47110.1| hypothetical protein A1Q1_04103 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1107
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 121/278 (43%), Gaps = 55/278 (19%)
Query: 83 LLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVEL--LGEISIPECLTYLDNGVVFVGSRLG 140
LLGD GRL + E E+ +++ +V + +G +S P LTYLDNG +F S G
Sbjct: 291 LLGDEYGRLTAVGWEFED-------MEKVQVGMIDMGVVSAPSSLTYLDNGYLFSASACG 343
Query: 141 DSQLVKL-------NRSP-----------DENGTY-----------VSVMESFTNLAPII 171
DS LV L R P + G Y V V E + N+AP
Sbjct: 344 DSLLVYLVLPSPNSTRQPSGKGKEKAHDISDAGAYEIVTAEPQHGRVDVRERWMNIAPAK 403
Query: 172 DMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALSIGSPK 230
D +V + +V SG S R++R+G+G E I ++PGI+ +W + P
Sbjct: 404 DFAIVKEDDGRVSHVVVASGSASSNSFRVVRSGVGFENLMTIEEIPGIERMWTI----PA 459
Query: 231 NLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQ-----TFYCGNVDPRTVLQVTPS 285
+L++SF T +L + E E+ F + Q TF G VD +LQVTP
Sbjct: 460 ADGPSLMVSFAYSTTILQI------EPEVSVFKAADQVTAVPTFAAGLVDKSLLLQVTPE 513
Query: 286 AAILISTESKARVS-SWEPPNGKSISVVSCNKNQVLCA 322
L S + ++ + + P I+ + N + A
Sbjct: 514 GIRLWSDLAAGMLAGNVDAPEDNRIATANVRGNIAVAA 551
>gi|255581562|ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus communis]
gi|223528782|gb|EEF30789.1| spliceosomal protein sap, putative [Ricinus communis]
Length = 1220
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 8/167 (4%)
Query: 125 LTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQG 184
L +++ G + +GD ++K+ ++ Y S ++ N+API+DM VVD + Q
Sbjct: 425 LLWVEGGFLAALVEMGDGIVLKVE---NDRLRYASPIQ---NIAPILDMSVVDHHDEKQE 478
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVG 242
Q+ C G EGSLRIIR+GI +E+ G+ G WAL + + +VLSFV
Sbjct: 479 QMFGCCGVAPEGSLRIIRSGISVEKLLRTAPIYQGVTGTWALRMKVTDLYHSFVVLSFVE 538
Query: 243 HTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAIL 289
TRVL++ + + T+ GF + T CG V ++Q+ +A L
Sbjct: 539 ETRVLSVGVSFADVTDSAGFLPNVCTLACGLVGDGLLVQIHQTAVRL 585
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 1 EGSLRIIRNGIGIEE--HACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 55
EGSLRIIR+GI +E+ G+ G WAL + + +VLSFV TRVL++
Sbjct: 489 EGSLRIIRSGISVEKLLRTAPIYQGVTGTWALRMKVTDLYHSFVVLSFVEETRVLSV 545
>gi|323447810|gb|EGB03719.1| hypothetical protein AURANDRAFT_72671 [Aureococcus anophagefferens]
Length = 760
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 13/193 (6%)
Query: 1011 DQNTFEILHAHQLFPGEYAL-----SLISSKFGEDPNTYFVLGTAVVHPEEN-EPKQGRI 1064
D+ + +H L P E L SL S +D +FV+GTA E + EP GR+
Sbjct: 416 DEAPYNDVHREALEPLEIPLCCSIISLDSISTYKDQRAHFVVGTAFAAQENDFEPCSGRM 475
Query: 1065 IIFHYDDGKLQQ--IAEKEIKGACYSMCEFNGKLL-ASINSTVRLFEWT----NEKELRL 1117
IIF + + E GA Y + LL ++N + +++ L+
Sbjct: 476 IIFRSGQANVAPSVLFFVEANGAVYDVAAMRASLLVCAVNHAIHIYDPVVRDNRRGHLKP 535
Query: 1118 ECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILD 1177
S+ ++AL ++ G+ I+VGD+MRS+TLL + E++ DYN NW+ ++E++
Sbjct: 536 RASYDGLVVALKVQCYGNLIVVGDMMRSVTLLNLIRQKMIIVEVACDYNTNWVCALEVIG 595
Query: 1178 DELFLGAENSYNL 1190
D F+ A+ S +L
Sbjct: 596 DGSFIIADASGSL 608
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 184/433 (42%), Gaps = 58/433 (13%)
Query: 173 MVVVD-LERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKN 231
M VV+ + +GQG++V C G G+L I+ +G +D+ G SP
Sbjct: 1 MCVVEPADAEGQGRIVACCGAGDAGTLHIVHDG--------LDVTGTAS------RSPTR 46
Query: 232 LDN-TLVLSFVGHTRVLTLSGAE-----VEETEMGGFTSDQQTF-------YCGNVDPRT 278
+ N +L+LS G +++ A + F S+ Q F YC N+
Sbjct: 47 ITNLSLILSSRGEMVIVSTEAATHAFLVANDGSTTAFPSNPQGFDETISTIYCCNLGDAA 106
Query: 279 VLQVTPSA-AILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEI 337
V QVTP A + + E++ ++ +W P +G+ I+ + N V+ + + L + ++
Sbjct: 107 V-QVTPRAISKFYTGENRRKLKTWRPKDGR-ITAATGNNGAVILISLSN-GKLVLLDCDV 163
Query: 338 KQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEP 397
+ +A AL+ E +C+ +SP S + + A AV +W+D + + S+ +P
Sbjct: 164 EPIASAALDDEASCVALSP-SGSASFKDLGMAHATAVSVWSDPVSCVSVYDSILNKIHDP 222
Query: 398 L----------GGEIIPRSILMTCFEGHCYLLVALGDG--SMFYFSLDPASGRLTDKKKV 445
R+++++ YL A GDG +++ F+ T + V
Sbjct: 223 TITWQDKSSNEQTLQFVRALVLSEINEKPYLFCASGDGLVTVYQFACGNDVVTTTRLRAV 282
Query: 446 TLGTQPT---VLKTFRSLSTTNVFACSDRPTVIY---SSNHKLVFSNVNL----RQVNHM 495
+LG P +L F ++ + V SDR V+ +S+ + V ++ + +
Sbjct: 283 SLGVLPARVLILGAFDRMARS-VLCFSDRACVVRRGCASHLQWVVASAKAFGETTEWRYY 341
Query: 496 CSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTR 555
+ + LA S F ID Q + + +VPL E P I + S F V T
Sbjct: 342 IVVPLHKKATTAILACGSQFAICKIDANQGIKVVSVPLAEQPLCICHDLQSHLFAVCT-- 399
Query: 556 IDIQEADGSTPVR 568
ID +E D +R
Sbjct: 400 IDHREGDNQGVIR 412
>gi|406602265|emb|CCH46158.1| Pre-mRNA-splicing factor [Wickerhamomyces ciferrii]
Length = 1123
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 161/382 (42%), Gaps = 24/382 (6%)
Query: 169 PIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKG-IWALSIG 227
P+ID +V+ ++ + SG SL+I++ G+ I E DLPGI +W +
Sbjct: 398 PLIDSKLVN--DDAFTKIYSLSGVKDSSSLKILQYGLSINEIVESDLPGIANKVWTTKLN 455
Query: 228 SPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAA 287
D LV+SF+ T VL++ G VEE G +++T + +++Q+ +
Sbjct: 456 KNDEFDKYLVISFMDTTLVLSI-GENVEEITDSGLALNEETIGIQQIGINSLVQIHSNG- 513
Query: 288 ILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD-VYYLEVHGSEIKQLAHRALE 346
+ + ++ ++ W+PP G I S Q+ D + Y EV + R +E
Sbjct: 514 -IRNIKNGELINEWQPPAGIKILTTSTTNRQIAIGLSNDELVYFEVDDRD------RLIE 566
Query: 347 Y---EVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGG 400
Y + I LS + ++ VG D + R+LS +LE + + L
Sbjct: 567 YNERKELTSRIVSLSLGDIPEGRLRSPFLIVG-CQDSTIRVLSTDPGSTLELLSLQALSS 625
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
IP IL ++ + L +G +D +G+L+D + LG +P L
Sbjct: 626 --IPFDILTLSMNNQLFVNIGLENGVYVRTLIDEQNGQLSDTRIKYLGNKPVSLSKISIS 683
Query: 461 STTNVFACSDRPTVIY-SSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGT 519
V A S++ +++ + N +++ + + N+E D + T
Sbjct: 684 GVNVVLAFSNKTWIVHETKNSTFKINSLLINPLKFGFMFNSEDCIDGIVGVYKKNLIIFT 743
Query: 520 IDEIQK-LHIRTVPLGEAPRRI 540
ID++ +I ++ L P+ +
Sbjct: 744 IDDLDNDFNINSIQLKTTPKNL 765
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
Query: 1015 FEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKL 1074
E+ + QL E ++ KF +Y ++ + H + I YD +L
Sbjct: 791 LELNKSIQLSESETIITSTIVKFESKSTSYLLVSISKKH----DNGSNEFFINTYD-LEL 845
Query: 1075 QQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALF-LKVK 1133
I +I Y++ EF GK+L I++ +RLF+ ++ L S + I + ++ +
Sbjct: 846 NLIHITKISDIAYAITEFQGKVLIGISNHLRLFDMGLKQLLSKANSKIDTISKIVKIETQ 905
Query: 1134 GDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFIC 1193
G ++VGD+ S+T L YK F + D P +TSI++LD +G + NLFI
Sbjct: 906 GYRVVVGDIRESITFLVYKPKSNEFLTFTDDILPRHITSIKMLDYNTVIGGDKFGNLFIL 965
Query: 1194 Q--KDSAATSDEDRTHL 1208
+ ++S+ SD + T L
Sbjct: 966 RASEESSKISDTNSTFL 982
>gi|428180132|gb|EKX49000.1| hypothetical protein GUITHDRAFT_105085 [Guillardia theta CCMP2712]
Length = 1207
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 20/263 (7%)
Query: 936 LAGRLFMLLLEKEEKMDGTFSVKEP--KVELLGEHCKGPVVEMSSLSYIKPGSTKQSTAN 993
+ G M+++E + D ++++ KV++ G+ E LSY G +
Sbjct: 791 IKGTTMMMVIESDHNTDANKALQDGANKVDMEGQDG-----EADKLSYEMFGVQRAGNGC 845
Query: 994 QPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAV-V 1052
+ +L +ID ++ E ALSL SS G + ++GT+V +
Sbjct: 846 WAS---------SLRVIDMDSLVSRQIINYSDDEAALSLCSS-VGANGEHLVLVGTSVGL 895
Query: 1053 HPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNE 1112
E G + + L + + G ++C + G++L + S +R++E +
Sbjct: 896 RMGEKHASSGFVYTYSVSGSHLHLEHKTPMDGIPRAICNYQGRVLVGVGSALRMYEIGKK 955
Query: 1113 KELR-LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMT 1171
K LR E F N+I + +GD I VGD S +LL++ ++ SFE + D W+T
Sbjct: 956 KLLRKCESRKFPNLIC-SIHTQGDRIFVGDSAESFSLLRFNSLSNSFELFAEDARARWLT 1014
Query: 1172 SIEILDDELFLGAENSYNLFICQ 1194
+ LD + GA+ NLFIC+
Sbjct: 1015 ASCPLDFDTVAGADKFGNLFICR 1037
Score = 70.5 bits (171), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 175/414 (42%), Gaps = 39/414 (9%)
Query: 153 ENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
N Y V+E +L+PI+ M V+DL +G Q+ T G S+R++R+G+ + E A
Sbjct: 390 HNLQYFRVVEEIESLSPIVGMKVMDLYSEGNFQVFTLCGKGPRSSIRVLRHGLSVVEMAI 449
Query: 213 IDLPGIK-GIWALSIGSPKNLDNTLVLSFVGHTRVLTLS---GAEVEETEMGGFTSDQQT 268
LP + +W L S D +V+S + H+ V TL G VE G ++
Sbjct: 450 SQLPTVPVAVWTLKANSTDPHDRYIVVS-LAHSSVQTLVLSIGETVEAVANHGLLPHAKS 508
Query: 269 FYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD-- 326
+ ++QV + I + K S + N +SV N Q + T D
Sbjct: 509 ISIATMGD-CMIQVH-TNGIQVMKGGKNIPSPFASSNPVILSV---NNEQQMLVTQTDGV 563
Query: 327 VYYLEVHGS----EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISA 382
YLE+ G+ E ++ A EV ++++PLS +T + A +G + D +A
Sbjct: 564 TSYLEMEGTGTLREKGKININA--QEVCAVEVTPLSASQT-----LGKFAIMGAFMD-NA 615
Query: 383 RLLSLPSLEEVCKEPLGGEII----PRSI-LMTCFEGHC--------YLLVALGDGSMFY 429
L + SL+ + G + P SI L+ + +L V L +G +
Sbjct: 616 WFLCVVSLDASSFSSVVGRQVLQARPSSIALLQSYSRSSREPGRSVFFLYVGLENGVLMR 675
Query: 430 FSLDPASGRLTDKKKV-TLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVN 488
S + +G ++ + + +LG+ P L + + A S R + Y K ++
Sbjct: 676 MSFNAETGEISQEFRTRSLGSNPVKLVRVKVQEKEALLALSSRSWLAYHHQGKQCLDPLS 735
Query: 489 LRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIR-TVPLGEAPRRIA 541
++ + +++ P+ + + +++ + ++ + T L PR+ A
Sbjct: 736 YDMLDFAWNFSSQQCPEGFVCISQGSLRILSLERVGEIFSQATAKLAHTPRQCA 789
>gi|451852814|gb|EMD66108.1| hypothetical protein COCSADRAFT_34693 [Cochliobolus sativus ND90Pr]
Length = 1235
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 115/539 (21%), Positives = 193/539 (35%), Gaps = 68/539 (12%)
Query: 84 LGDLAGRLFMLLLEKEEKMDGTFSVKEP-------KVELLGEISIPECLTYLDNGVVFVG 136
L L G F LL+ E+ +V P K++ I + + L G V+
Sbjct: 294 LYSLKGGDFFYLLQTEDGDVFKLTVDAPNGTVENIKIKYFDTIPVTTSICILRAGFVYAA 353
Query: 137 SRLGDSQLVKLNRSPDENGTYV---------------------------SVMESFTNLAP 169
GD L +L DE V + +E+ +L P
Sbjct: 354 CESGDRILYELESLGDETDDPVFESSQFPVDPEASFAPPFFRPRALVNLTAVEAMPSLNP 413
Query: 170 IIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP-GIKGIWALSIGS 228
I+DM V + + Q+ T +G S R RN + + + LP +W + S
Sbjct: 414 IMDMEVANPALEDAPQIYTINGTGGRSSFRTTRNALEVLDLIESPLPQNASDVWTTKLTS 473
Query: 229 PKNLDNTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAA 287
D +VL H+R L L G +VEE GF D T ++Q+ P
Sbjct: 474 EDETDTLIVLCL--HSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGI 531
Query: 288 ILI---------STESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEI 337
I ++ + A ++ W+PP ++I + N QV A + + Y E
Sbjct: 532 RHIQGIQFPNDDASATHASLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFECDSDGS 591
Query: 338 KQLAHR--ALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL-PSLEEVC 394
+A LE + CL + + +A AVG +D + R+ +L P +E
Sbjct: 592 LAMAEEEIVLESTINCLAMP-----DVPEGSVRAFFLAVGC-SDQTVRIYNLSPDMEGNI 645
Query: 395 KEPLGGEII---PRSI---LMTCFEGHCY---LLVALGDGSMFYFSLDPASGRLTDKKKV 445
+ + + P + LMT Y L + L G LD +G + D ++
Sbjct: 646 LRSISVQALTSPPSDLTINLMTDKSSRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRR 705
Query: 446 TLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESY 503
LG +P + A + RP + Y+ V L ++ + N +
Sbjct: 706 FLGPEPIKFAKVTVAGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYISFKSAWNFDGSQF 765
Query: 504 PDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEAD 562
+ ++ + F D ++PL PR++ F VI + + AD
Sbjct: 766 KGIICVSANELRIFTFNDLTDNTTYESIPLKYTPRKMVGYHDQGVFYVIQSDNNTISAD 824
>gi|150863836|ref|XP_001382447.2| hypothetical protein PICST_54680 [Scheffersomyces stipitis CBS
6054]
gi|149385092|gb|ABN64418.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 1228
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 127/543 (23%), Positives = 227/543 (41%), Gaps = 67/543 (12%)
Query: 83 LLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVG------ 136
LL G LF + +E + +++ ++ I + L L +G +F
Sbjct: 306 LLQSSMGDLFKVTVEYNSDKE---LIEDIQIGYFDTIPVSSSLNILKSGFLFANVLNNDK 362
Query: 137 -----SRLGDS-QLVKLNRSPD---------ENGTY-------VSVMESFTNLAPIIDMV 174
+LGD + ++L SPD N T+ ++++E FT+L+PI D
Sbjct: 363 LYYQFEKLGDDDENIQLKASPDISSIDEEDRSNRTFTVKALDNLALVEIFTSLSPITDAG 422
Query: 175 VVDLERQGQG----QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSP 229
+V+ G Q++T S L+ + +GI LP I G+ + +
Sbjct: 423 IVESISSGTADSLQQMITASS---HSHLKSLVHGIQTSTLVSSPLPIIPTGVLTTKLFAD 479
Query: 230 KNLDNTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
D LV+S +R L LS G VEE E F +DQ T V +V+Q+ +
Sbjct: 480 SRSDEYLVISSTVASRTLVLSIGEVVEEVENSQFVNDQPTLAVQQVGTSSVVQIYTNGIR 539
Query: 289 LIS---TESKA-----RVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQ 339
+ TE K +++ W PP G +I S ++ QV+ A + ++ Y EV ++ Q
Sbjct: 540 HVKHTRTEDKEQSISRKITDWYPPAGITIVNASTHREQVIIALSNAEICYFEVDATD-DQ 598
Query: 340 LAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP---SLEEVCKE 396
L E++ S EET++ K L AV +D + ++LSL LE + +
Sbjct: 599 LIEYQDRVEMSNSITSIAICEETAN---KKNLFAVVGCSDETIQVLSLQPHNCLETLSLQ 655
Query: 397 PLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKT 456
L S+L + + + + +G S++ SG L+D + LG++P L
Sbjct: 656 ALSANSTSLSMLQN--DNTTMVHIGMDNGLYVRTSIEEISGNLSDTRIKYLGSKPVTLSV 713
Query: 457 FRSLSTTN-VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS--LALATDS 513
+ + + + A S RP + Y + + + + ++ S ++E +AL+ ++
Sbjct: 714 TKLPNGSKAILAISSRPWICYYNRSEFKVTPLLGVKILKGASFSSEDIGGEGIVALSDNN 773
Query: 514 --TFTFGT----IDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPV 567
FT G D Q ++I + L PR++ + ++ V E +P
Sbjct: 774 LIVFTIGKEDVEFDINQDVNIEKIRLRYTPRKLIIDDDGKSSKVNYIYALQSEYGTKSPF 833
Query: 568 RPS 570
PS
Sbjct: 834 SPS 836
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 4/141 (2%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNI--IALFL 1130
+L+ + + EI + M FNG+LL + +RL++ + + LR ++ + I I +
Sbjct: 946 RLEYLHKTEIDCSPTVMIPFNGRLLVGMGKYLRLYDIGHRQLLRKSSTNIDYISSIVDLV 1005
Query: 1131 KVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNL 1190
G+ I GD S+ ++ + E F + D +T++ LD + +G + N+
Sbjct: 1006 HTGGERIAFGDSHSSIVFAKFDSAENRFVPFADDIMKRQITAVAALDYDTVIGGDKFGNV 1065
Query: 1191 FICQ-KDSAA-TSDEDRTHLQ 1209
F+ + DS + SDED + L+
Sbjct: 1066 FVSRVPDSVSKKSDEDWSLLK 1086
>gi|403220626|dbj|BAM38759.1| uncharacterized protein TOT_010000226 [Theileria orientalis strain
Shintoku]
Length = 1455
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 124/560 (22%), Positives = 221/560 (39%), Gaps = 118/560 (21%)
Query: 101 KMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVS- 159
K +G V++ KVE +G +IP + LD +F SR G+S +++ + D+ S
Sbjct: 385 KREGELVVRDVKVERVGSCAIPSSIVKLDEERIFCTSRHGNSATMRIKGAGDKRSRIQSG 444
Query: 160 VMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK 219
+ + N+ P+ D + E + G ++ C G GS I GIG E +L G+
Sbjct: 445 RVWAQANVGPVTDFTYLQ-EEESDGSILACCGSGTSGSFCKIYFGIGSEVLYSKELRGVH 503
Query: 220 GIWALSIGSPKNLDNTLVL--SFVGHTRVLTLSGAEVEETEMGG---------------- 261
++ L + + + LV+ SF TR +S AE E + GG
Sbjct: 504 NLFGLHLQGREESEGHLVMCISFYRFTRFYLVSQAEGEARDKGGKSNSLELLETKLSEIV 563
Query: 262 ------FTSDQQTFYCGNVDPRTVLQVTPSAAIL----------ISTESKARVSSWEPPN 305
+D+ T + VLQVTP ++ +S ARV E P+
Sbjct: 564 KLEREELITDETTLLFSRFNEDCVLQVTPLNVLVAAQGFKKVTRVSVSELARVG--EGPD 621
Query: 306 GKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSE 365
++S + C ++ +L V L+ E+K + + + V+ IS +S + +
Sbjct: 622 F-TVSALVCGRHILLLLASNTVLLLD---HELKVVNRKKMGTSVS--SISYISKGDLTRS 675
Query: 366 PAKAQ-----------LAAVGLWTDISARLLSLPSLEEVCKE--PLGGEIIPRSILMTCF 412
+A LAA G W D ++ L SLE V K +G +S+
Sbjct: 676 SFRASSVFKQAECEGILAATG-W-DSEIMIMPLLSLEVVYKYRCSIGFGTFVKSLKFGMV 733
Query: 413 EGHCYLLVALGDGSMFYFS-------------------------------LDPASGR--- 438
YLL ++ DG ++ + LD GR
Sbjct: 734 GPEVYLLASVSDGKLYTYKFKETAESGDEGPKVKIEPDNIVELSDGSFKLLDVQLGRDDE 793
Query: 439 ---LTDKKKVTLGTQPTVLKT------FRSLSTTNVFACSDRPTVIYSSNH------KLV 483
L +K +T G++ +++ + ++ +N++A + YS+N K+
Sbjct: 794 TCDLRTRKLITTGSKCSIIHASNNKIEYTKVNVSNLWALATLSNKWYSNNSNGGTSDKMK 853
Query: 484 FSNVNLRQVNHMCSLNAESYPDSLA---------LATDSTFTFGTIDEIQKLHIRTVPLG 534
S+ + + N S N S L+ T+ + GT+D ++ L+++ + G
Sbjct: 854 HSSASTGKTNRSGSANQYSSGTFLSNSDEETLVVYYTNKSIVVGTLDFVKNLNVKRIVTG 913
Query: 535 EAPRRIAYQESSQTFGVITT 554
+IAY S+ V++T
Sbjct: 914 ANMNKIAYHSGSK-LAVVST 932
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 1113 KELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTS 1172
+ L L S+ +N + + V D + +GDLM S+ LL++K + E RD+N W +S
Sbjct: 1176 RYLELITSYESNTYIVAVDVCEDSVFLGDLMTSVKLLKFK--DKCLYESCRDFNTLWTSS 1233
Query: 1173 IEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVH 1215
+ +D L A++S N + K +D +G H
Sbjct: 1234 LAAVDASTCLVADDSGNFSVFAKSKTPVNDHKAIKFDTLGLFH 1276
>gi|452002380|gb|EMD94838.1| hypothetical protein COCHEDRAFT_1128717 [Cochliobolus
heterostrophus C5]
Length = 1235
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 114/539 (21%), Positives = 193/539 (35%), Gaps = 68/539 (12%)
Query: 84 LGDLAGRLFMLLLEKEEKMDGTFSVKEP-------KVELLGEISIPECLTYLDNGVVFVG 136
L L G F LL+ E+ +V P K++ I + + L G V+
Sbjct: 294 LYSLKGGDFFYLLQTEDGDVFKLTVDAPNGTVENIKIKYFDTIPVTTSICILRAGFVYAA 353
Query: 137 SRLGDSQLVKLNRSPDENGTYV---------------------------SVMESFTNLAP 169
GD L +L DE V + +E+ +L P
Sbjct: 354 CESGDRILYELESLGDETDDPVFESSQFPVDPEASFAPPFFRPRALVNLTAVEAMPSLNP 413
Query: 170 IIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP-GIKGIWALSIGS 228
I+DM V + + Q+ T +G S R RN + + + LP +W + S
Sbjct: 414 IMDMEVANPALEDAPQIYTINGTGGRSSFRTTRNALEVLDLIESPLPQNASDVWTTKLTS 473
Query: 229 PKNLDNTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAA 287
D +VL H+R L L G +VEE GF D T ++Q+ P
Sbjct: 474 EDETDTLIVLCL--HSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGI 531
Query: 288 ILI---------STESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEI 337
I ++ + A ++ W+PP ++I + N QV A + + Y E
Sbjct: 532 RHIQGIQFPNDDASATHASLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFECDSDGS 591
Query: 338 KQLAHR--ALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL-PSLEEVC 394
+A L+ + CL + + +A AVG +D + R+ +L P +E
Sbjct: 592 LAMAEEEIVLDSTINCLAMP-----DVPEGSVRAFFLAVGC-SDQTVRIYNLSPDMEGNI 645
Query: 395 KEPLGGEII---PRSI---LMTCFEGHCY---LLVALGDGSMFYFSLDPASGRLTDKKKV 445
+ + + P + LMT Y L + L G LD +G + D ++
Sbjct: 646 LRSISVQALTSPPSDLTVNLMTDKSSRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRR 705
Query: 446 TLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN--AESY 503
LG +P + A + RP + Y+ V L ++ + N +
Sbjct: 706 FLGPEPIKFAKVTVAGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYISFKSAWNFDGSQF 765
Query: 504 PDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEAD 562
+ ++ + F D ++PL PR++ F VI + + AD
Sbjct: 766 KGIICVSANELRIFTFNDLTDNTTYESIPLKYTPRKMVGYHDQGVFYVIQSDNNTISAD 824
>gi|84996279|ref|XP_952861.1| splicing factor 3b subunit [Theileria annulata strain Ankara]
gi|65303859|emb|CAI76236.1| splicing factor 3b subunit, putative [Theileria annulata]
Length = 1340
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 165/415 (39%), Gaps = 72/415 (17%)
Query: 107 SVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNR-------------SPDE 153
+V E + + + + L +G +F+GS GD +L + PD
Sbjct: 376 TVSEVVIRYFDTVDVGISMCILRSGYLFIGSESGDHKLYQFTSLDNGDKDVICTSLHPDA 435
Query: 154 NGTYVS----------VMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRN 203
++ V++ +++ ++DM V D+ + G + L+ +R
Sbjct: 436 KNAIIAFKPRVLQNLVVVDRMSSMGLVVDMKVADVMGLNNYDIFVACGRWYNSRLKCLRY 495
Query: 204 GIGIEEHACIDLPGIKGIWALSIGS-PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGF 262
G EE A +LPG + +I S N D +++SF G+T VL++ G VEE F
Sbjct: 496 GFNTEELAFNELPG-RPKHVFTIKSLESNFDEYIIISFQGNTLVLSI-GEAVEEVTDSFF 553
Query: 263 TSDQQTFYCGNVDPR------------------TVLQVTP-------SAAILISTE---- 293
+ T +C + R TV P + I +
Sbjct: 554 LTSITTLHCCYMSYRNGVSSSGVGGVSGVSGVGTVTNGVPVTGGTGITRGIYVQIHDGGY 613
Query: 294 ---SKARVSSWEPPNGKSISVVSCNKNQ-VLCATGCDVYYLEVHGSEIKQL---AHRALE 346
S + W+ + K + + N Q +L TG ++ Y ++ +E+ +L R L
Sbjct: 614 RYLSGDIIKEWKVQSTKRVKLADNNDTQLILVLTGGEIIYFQLTDTEVPELVEVGRRNLS 673
Query: 347 YEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVC-KEPLGGEIIPR 405
E+ CL I + + KA+ G +I R++ L ++C + LG +P
Sbjct: 674 TEITCLAI------QHPNSGTKAEFCCCGSIDNI-VRIMKLDKNLKLCSSQILGNNSLPE 726
Query: 406 SILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSL 460
S+ + YL V L +G + +LD G L D++ +GT+P LK + +
Sbjct: 727 SVTLLT-NDEIYLYVGLNNGVLIRNTLDMI-GNLIDQESRFMGTKPLKLKLLQYM 779
Score = 43.1 bits (100), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 1053 HPEENEPKQGRIIIFHYDDG----------KLQQIAEKEIKGACYSMCEFNGKLLASINS 1102
H + N+ + I ++ YD KL I + C++ E N LL +I S
Sbjct: 1048 HMDVNDEVESCIRVYEYDSNYNNLVNGFNIKLLHITNTKGWIRCFNNYE-NKLLLCAIGS 1106
Query: 1103 TVRLFEWTNEKELRLECSHFNNIIALFLKVK--GDFILVGDLMRSLTLLQYKTME---GS 1157
+R++ +K++ L+ H + F+ +K G I GD+ S+ LL+ K G
Sbjct: 1107 KLRMYSL-GKKQMLLKGEHRSLTSHGFMDIKVIGSRIYCGDIRESVQLLRIKFYGEDLGE 1165
Query: 1158 FEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ 1194
FE + P W++S+E+LD + + ++F+ +
Sbjct: 1166 FELTTTSTGPRWLSSMELLDYSTVIAGDKFDSIFVSR 1202
>gi|413948668|gb|AFW81317.1| hypothetical protein ZEAMMB73_752618 [Zea mays]
Length = 122
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQR 743
T LNL++AK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T+R
Sbjct: 25 TSPNQLNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATIELFRPHNETQDFLFIATER 84
Query: 744 YNAMILECRGDIDNLEILTKAHGNVSDRIGK 774
Y +L+ D + E++T++H +V R K
Sbjct: 85 YKFCVLQ--WDTEKSELITRSHLHVVCRKTK 113
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 46/62 (74%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIIT 684
NFTS LNL++AK RIEIH +TP+GL+P+ ++ +YG+IA ++ FR + +D LFI T
Sbjct: 23 NFTSPNQLNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATIELFRPHNETQDFLFIAT 82
Query: 685 QR 686
+R
Sbjct: 83 ER 84
>gi|326469377|gb|EGD93386.1| splicing factor 3B subunit 3 [Trichophyton tonsurans CBS 112818]
Length = 1188
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 173/461 (37%), Gaps = 70/461 (15%)
Query: 82 YLLGDLAGRLFMLLLE--KEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + +E ++E T VK K++ + + L L +G +FV S
Sbjct: 306 FLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLFVASET 365
Query: 140 GDS---QLVKLNRSPDE----NGTYVSVM--------------------ESFTNLAPIID 172
G+ Q KL DE + Y +V+ ES +L P++
Sbjct: 366 GNQHFYQFEKLGDDDDEIEFISDDYSAVISEPLPPVYFRPRPAENLNLVESIASLNPLMA 425
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
+ ++ + Q+ T G G I E +LP + +W +
Sbjct: 426 ASITNITEEDAPQIYTLCG-----------TGARISEIVESELPSVPSAVWTTKLSRNDQ 474
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D +VL +G T VEE GF S T + +++QV P I
Sbjct: 475 FDAYIVL--IGET---------VEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 523
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYY-LEVHGSEIKQLAHRALEYE 348
+ RV+ W P +SI + N+ QV A +G VY+ ++ GS + R +
Sbjct: 524 ADQ--RVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGT 581
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPR 405
V CL + E ++ AVG D + R+LSL +LE + L
Sbjct: 582 VTCLSLG-----EVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 635
Query: 406 SILM----TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
SI+ T YL + L G LD +G L+D + LG +P L +
Sbjct: 636 SIMSMIDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKE 695
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAES 502
V A S R + YS F+ L V S N S
Sbjct: 696 QRAVLALSSRSWLGYSDVQTKSFTLTPLNYVGLEWSWNFSS 736
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
+T +L +L E A+S+ + F ++ T+ V+GT VV P I F
Sbjct: 843 HTKSVLSNLELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSPRTFTCGFIHIYRFQ 902
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
+ +L+ I + +++ ++ F G+LLA I +R+++ + LR + + +
Sbjct: 903 EEGKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIV 962
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK E + + D P W T ++D E G +
Sbjct: 963 GLQTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAGGDKFG 1022
Query: 1189 NLFI--CQKDSAATSDED 1204
N+++ C ++ +DED
Sbjct: 1023 NIWLLRCPTKASEEADED 1040
>gi|170064589|ref|XP_001867587.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167881936|gb|EDS45319.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 70
Score = 76.6 bits (187), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/47 (72%), Positives = 43/47 (91%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFR 671
NFTS+TDLNL+VAK++R+EI+ VTPEGLRP+KE+ + GKIAVMK FR
Sbjct: 22 NFTSTTDLNLIVAKSSRLEIYLVTPEGLRPIKEVGINGKIAVMKLFR 68
Score = 69.3 bits (168), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/45 (68%), Positives = 39/45 (86%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFR 728
T TDLNL+VAK++R+EI+ VTPEGLRP+KE+ + GKIAVMK FR
Sbjct: 24 TSTTDLNLIVAKSSRLEIYLVTPEGLRPIKEVGINGKIAVMKLFR 68
>gi|238609081|ref|XP_002397396.1| hypothetical protein MPER_02189 [Moniliophthora perniciosa FA553]
gi|215471757|gb|EEB98326.1| hypothetical protein MPER_02189 [Moniliophthora perniciosa FA553]
Length = 180
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 158 VSVMESFTNLAPIIDMVVVD-LERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP 216
+++ + +L PI+D V++ L Q+ G SLR +R+G+ +EE +LP
Sbjct: 21 LAIADEIESLCPILDSKVLNILPNSDTPQIFAVCGRGARSSLRTLRHGLEVEESVSSELP 80
Query: 217 GI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVD 275
GI +W D+ ++LSFV T VL++ G +EE + GF S T +
Sbjct: 81 GIPNAVWTTKKREDDPFDSYIILSFVNGTLVLSI-GETIEEVQDTGFLSSAPTLAVQQIG 139
Query: 276 PRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318
+LQV P + +S RV+ W P GKSI + NK Q
Sbjct: 140 ADALLQVHPGGIRHVLADS--RVNEWRVPTGKSIVAATTNKRQ 180
>gi|443918546|gb|ELU38987.1| CPSF A subunit region domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 1037
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 140/334 (41%), Gaps = 45/334 (13%)
Query: 83 LLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLD-NGVVFVGSRLGD 141
++GD G L + + E + F++ LLG++S C+ LD G V G +
Sbjct: 224 IVGDSFGHLHLATMSMEPQ----FAMS---CMLLGDVST--CMILLDPEGSVSRGKK--- 271
Query: 142 SQLVKLNRSPDENGTYVSVM-ESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
+ PD+ T++ V+ E NLAPI+D +V+++ GQ ++ SG G L +
Sbjct: 272 -------KQPDDETTHLEVIVEHNKNLAPILDATLVEIDGSGQPRIALISGDESGGWLSV 324
Query: 201 IRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEV---EE 256
+ G E A +D L ++ I+ L + + LV S T +L+L+ + +
Sbjct: 325 VHKGASFRELAILDGLGHLENIFPLKKYFDERTHSYLVASTTTSTYILSLADSSISLLSR 384
Query: 257 TEMGGFTSDQQTFYCGNVDPRTV---LQVTPSAAILISTESKARVSSWEPPNGKSISVVS 313
E+ G + + T NV V + VTP +LI + +SSW+PP G +
Sbjct: 385 EELSGISRSETTILASNVPLGGVDAAIHVTPQKIVLIDIITGRAISSWKPPKGDITAAAL 444
Query: 314 CNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAA 373
+ +C + + ++ L ++++ L I+ A + A
Sbjct: 445 DTSSSTICVATSEGHLFSLNIQSAGLLQTGKPHWQISSLAIN-------------AGIVA 491
Query: 374 VGLWTDISARLLSLPSL----EEVCKEPLGGEII 403
W ++ LP L E V +EP ++
Sbjct: 492 AAFWGSNEVQIFLLPGLKRVGESVIQEPSAASVV 525
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 106/215 (49%), Gaps = 33/215 (15%)
Query: 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQG 1062
E H + D +TF+ L ++L E S+ + N+Y + GTA+++P ENEP G
Sbjct: 679 ERHFVRFHDDSTFKDLGQYKLKYSEMVTSI--GVYTHGGNSYILAGTAIINPGENEPLAG 736
Query: 1063 RIIIFHYDDGKLQQI-AEKEIKGACYSMCEFNGKLLASINSTVRLFEW------TNEKEL 1115
RII+F D+ + + A K+++G S+ + +++A+I + L+ ++
Sbjct: 737 RIILFGQDEENMIKFKASKDVEGGVSSIKQLGARIIAAIGHGIYLYNLGRGEVTISDPVA 796
Query: 1116 RLECSHF-NNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS----------------- 1157
R E + ++II V+ + I+V D +RS+++L++ +
Sbjct: 797 RWERGYIVHDII-----VRPNMIVVSDRLRSVSVLRFIERTSTPESHEEIETEEDSTILQ 851
Query: 1158 FEEISRDYNPNWMTSIEIL-DDELFLGAENSYNLF 1191
FE ++ D + W TS+E+L D++ + ++ N+
Sbjct: 852 FETVAMDMHAVWPTSVEVLPDNKTIIASQTDGNIL 886
>gi|300176205|emb|CBK23516.2| unnamed protein product [Blastocystis hominis]
Length = 702
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 1007 LLIIDQNTFEILHAHQLFPGEYALSLISSKF-----GEDPNTYFVLGTAVVHPEENEPKQ 1061
L + D T+ I L P E AL + S + N FV+GTA V PEENEP Q
Sbjct: 309 LQLRDPKTYAIRDELPLKPSEIALCVASGSIFPLSNAPERNEVFVVGTAFVLPEENEPSQ 368
Query: 1062 GRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFE 1108
GR+++ + +L+ +AE + G C S+C F GK++ +NS +++F+
Sbjct: 369 GRLLVLRAVEHRLELVAETMLSGGCLSICLFKGKVVCGVNSELQVFD 415
>gi|396488712|ref|XP_003842924.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
gi|312219502|emb|CBX99445.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
Length = 1236
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 110/549 (20%), Positives = 194/549 (35%), Gaps = 66/549 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
YLL G +F L +E V++ K++ I + + L G V+ GD
Sbjct: 310 YLLQTEDGDVFKLTVEASNG-----KVEKIKIKYFDTIPVCTSICILRAGFVYAACESGD 364
Query: 142 SQLVKLNRSPDENG---------------------------TYVSVMESFTNLAPIIDMV 174
L +L DE T ++ +E +L PI+ M
Sbjct: 365 RILYELESLGDETEDPLFSSDQFPVDTDAKFAPPYFKPRALTNLTAVEQMPSLNPIMGME 424
Query: 175 VVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP-GIKGIWALSIGSPKNLD 233
V + + Q+ T +G S R RN + + + LP +W + S D
Sbjct: 425 VANPALEDAPQIYTINGTGGRSSFRSTRNALEVLDLIESPLPQNASDVWTTKLTSDDETD 484
Query: 234 NTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILI-- 290
+VL H+R L L G +VEE GF D T ++Q+ P I
Sbjct: 485 TLIVLCL--HSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHIQG 542
Query: 291 -------STESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAH 342
+ + ++ W+PP ++I + N QV A + + Y E +A
Sbjct: 543 IQFPDNDANATHQSLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFECDSDGSLAMAE 602
Query: 343 R--ALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL-PSLEEVCKEPLG 399
AL+ + CL + + +A AVG +D + R+ +L P +E +
Sbjct: 603 EEIALDSTINCLAMP-----DVPEGSVRAFFLAVGC-SDQTVRIFNLSPDMEGNILRSIS 656
Query: 400 GEII---PRSILMTCFEGHC------YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQ 450
+ + P + + +L + L G LD +G + D ++ LG +
Sbjct: 657 VQALTSPPSDLTINLMSDKSPRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPE 716
Query: 451 PTVLKTFRSLSTTNVFACSDRPTVIYSSNHK--LVFSNVNLRQVNHMCSLNAESYPDSLA 508
P + A + RP + Y+ L + +N + + + +
Sbjct: 717 PIKFAKVTVAGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYIAFKSAWNFDGSQFKGIIC 776
Query: 509 LATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVR 568
++ + F D +PL PR++ F +I + + AD +
Sbjct: 777 VSANELRIFTFNDLTDNTTYENIPLKYTPRKMVGYHEQGIFYIIESECNTLNADTRQNLI 836
Query: 569 PSASTQAQN 577
AS Q +N
Sbjct: 837 QKASKQDEN 845
>gi|321260749|ref|XP_003195094.1| hypothetical protein CGB_G1120W [Cryptococcus gattii WM276]
gi|317461567|gb|ADV23307.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 1276
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 212/511 (41%), Gaps = 85/511 (16%)
Query: 116 LGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN---------------RSPD-------- 152
LG S P +TYLD+ +FV S + DS L++ R+
Sbjct: 413 LGASSPPSSITYLDSSHLFVSSAVADSVLLRFTTVESSSSVSSSKGKGRAATGPIGDQLD 472
Query: 153 ------ENGTYVS-------VMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
ENG + ++E + N+AP+ D+ VV E LV SG + SLR
Sbjct: 473 KWEVMYENGKERNDTDGGPEILERWMNIAPVKDLCVVKDEGGNLSHLVLASGASESNSLR 532
Query: 200 IIRNGIGIEEHACID-LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
++R+G+G+EE I L ++ +W+L+ + + L+LS T +L L ++
Sbjct: 533 VVRSGVGLEELVTIQGLHDVQKMWSLTDSTAT---SRLLLSTSNSTVLLQLQ-PDISVIP 588
Query: 259 MGGFTSDQQTFYCGNVDPRTVL-QVTPSAAILISTESKARVSSWEPPNGKSISVVSCN-- 315
+ +T G + +L Q+TP L S + ++ + + K +V
Sbjct: 589 TTDIIFNSETLAAGILPGAELLAQITPRGLFLWSDLNSGQLEA-QVEVDKETEIVCAQVT 647
Query: 316 -KNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAV 374
+ V+ G ++ V + ++ EV+ + IS S+ SS P + A+
Sbjct: 648 AEWAVVAKNGGNLVVFHVSNTGFNPKGTIDVKEEVSAVAISRNSD---SSSP----IIAI 700
Query: 375 GLWT---------DISARL--LSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALG 423
WT IS+ + LS+PS L RS + LL L
Sbjct: 701 STWTAKTVVYTLSQISSGVDGLSIPSKSSATSLQL------RS--HPSYPAGIQLLSGLD 752
Query: 424 DGSMFYFSLDP-----ASGRLTDKKKVT-LGTQPTVLK----TFRSLSTTNVFACSDRPT 473
+G + + LD G + K T LG +P L T +V A ++R +
Sbjct: 753 NGLLQIYDLDKDDMGGVDGLVVKSSKTTSLGLRPLALHPCEITGGDEKVISV-ALTERMS 811
Query: 474 VIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPL 533
VI+ S ++ FS+VN++ + ++N S P + S + I+ ++KLH++T
Sbjct: 812 VIFESKDRIEFSSVNIKNIMAAAAVNTSSGPVLALFSRTSGLSLLKINSLKKLHVQTCDT 871
Query: 534 G-EAPRRIAYQESSQTFGV-ITTRIDIQEAD 562
G E+ ++ Y + + +T R +++ D
Sbjct: 872 GNESISKLNYMDEYKAIACGLTRRTQLRDGD 902
>gi|322700233|gb|EFY91989.1| Pre-mRNA-splicing factor rse-1 [Metarhizium acridum CQMa 102]
Length = 1039
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 139/338 (41%), Gaps = 42/338 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFS--VKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+LL G LF + L+ E DG + V K++ I + + + +G +F
Sbjct: 305 FLLQTDDGDLFKVTLDMAEDADGNLTGEVTRIKIKYFDTIPVSNSICIMKSGFLFTAGEF 364
Query: 140 GDSQLVKLNRSPDEN---------------GTY------------VSVMESFTNLAPIID 172
G+ Q + + D++ +Y ++++ES +++AP++D
Sbjct: 365 GNYQFYQFEKLGDDDDETEFTSDDFPTDYQASYHPVYFHPRPLENLTLVESVSSMAPLMD 424
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKN 231
++ + Q+ G +LRI+R+G+ + E +LPG +W + +
Sbjct: 425 CKILTQAGEDISQIYAACGNGARSTLRILRHGLEVNELVASELPGTPSAVWTTKLTQSDD 484
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D ++L+F+ T VL++ G V + GF + T + ++ QV I
Sbjct: 485 YDAYIILTFLHDTMVLSV-GETVTQVTDSGFITTVATLAVQQIGKNSLFQVYSKGIRHIQ 543
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEV-HGSEIKQLAHRALEYEV 349
+ + + W P ++I + N+ QV A + ++ Y EV + + R V
Sbjct: 544 S---GQFTEWPVPQHRTIVAAATNERQVAIALSSGEIVYFEVDEDGSLAEFDERKEIGSV 600
Query: 350 ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL 387
L + P+ ++ AVG D + R+LSL
Sbjct: 601 TSLGLGPVPEGRL-----RSPFLAVGC-DDCTVRILSL 632
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 5/176 (2%)
Query: 1039 EDPNTYFVLGTA---VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGK 1095
+D ++ ++GT +V+P ++ + FH D L+ I + +++ ++ F+G+
Sbjct: 721 QDGESFLIIGTGKDMIVNPRQSSEGFIHVYRFHDDGRSLEFIHKTKVEEPPTALLSFHGR 780
Query: 1096 LLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTME 1155
LLA I T+R+++ + LR + + + L+ +G I+VGD+ +T++ Y +
Sbjct: 781 LLAGIGKTLRIYDLGMRQLLRKAQADISPQHIVSLQSQGFRIVVGDVQHGVTMVVYNPVS 840
Query: 1156 GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI--CQKDSAATSDEDRTHLQ 1209
D W T + + D E G + N++I C ++A +DE + +Q
Sbjct: 841 NKLLPFVDDTIARWTTCLAMADYESVAGGDKFGNIWIVRCPDKASAEADEPGSDVQ 896
>gi|169599248|ref|XP_001793047.1| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
gi|160704565|gb|EAT90655.2| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
Length = 1246
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 111/549 (20%), Positives = 194/549 (35%), Gaps = 66/549 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
YLL G +F L ++ +V+ K++ I + + L G V+ GD
Sbjct: 310 YLLQTDDGDVFKLTVDAPSG-----TVERIKIKYFDTIPVATSICILRAGFVYAACESGD 364
Query: 142 SQLVKLNRSPDENG---------------------------TYVSVMESFTNLAPIIDMV 174
L +L DE T ++ +E+ +L PI+ M
Sbjct: 365 RILYELESLGDETDDPMFESGQFPVDPEAVFAPPFFKPRALTNLTAVETMPSLNPIMGME 424
Query: 175 VVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP-GIKGIWALSIGSPKNLD 233
+ + + Q+ T +G + R RN + + + LP +W + D
Sbjct: 425 IANPMLEDAPQIYTINGAGGRSTFRTTRNALEVLDLIESPLPQNASDVWTTKLTLEDETD 484
Query: 234 NTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILI-- 290
+VL H+R L L G +VEE GF +D T ++QV P I
Sbjct: 485 TLIVLCL--HSRTLVLKIGEDVEEASNTGFMADTNTLGVQQFGEDCIIQVHPKGIRHIQG 542
Query: 291 -------STESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAH 342
+ + ++ W+PP ++I + N QV A + + Y E +A
Sbjct: 543 IQFPEDGAVATHTSLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFECDADGSLAMAE 602
Query: 343 R--ALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL-PSLE-------- 391
AL+ + CL I + +A AVG +D + R+ +L P +E
Sbjct: 603 EEIALDSTINCLAIP-----DVPEGSVRAFFMAVGC-SDQTVRIFNLSPDMEGNILRSIS 656
Query: 392 -EVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQ 450
+ P G I + +L + L G LD +G + D ++ LG +
Sbjct: 657 VQALTSPPSGLTINMMSDKSSRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPE 716
Query: 451 PTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAE--SYPDSLA 508
P + A + RP + Y+ V L + + N E + +
Sbjct: 717 PIKFAKVTVAGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYIAFKSAWNFEGSQFKGIIC 776
Query: 509 LATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVR 568
++ + F D T+ L PR++ F VI + + AD +
Sbjct: 777 VSANELRIFTFNDLTDNTTYETIQLKYTPRKMVGYHEQGVFYVIQSENNTLSADTRQKLI 836
Query: 569 PSASTQAQN 577
A T+ ++
Sbjct: 837 AEADTKQED 845
>gi|402588688|gb|EJW82621.1| splicing factor 3b [Wuchereria bancrofti]
Length = 601
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 119/282 (42%), Gaps = 39/282 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G +F + LE E + V E K++ I + + L G +F S G+
Sbjct: 310 FLVQTDQGDIFKVTLESEHDI-----VTELKIKYFDTIPVSNAMCILKTGFLFTASEFGN 364
Query: 142 SQLVKLNRSPDENGT--YVSVM-----ESFTNLA--------------------PI--ID 172
L ++ DE+ + S M E+F L P +
Sbjct: 365 HHLYQIAHLGDEDDEPEFSSRMQLEEGETFFLLLVGSQIWQLLTRWIAYHRLFLPTFKVH 424
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKN 231
++ DL + Q+ T G +++++RNG+ + E A +LPG +W +
Sbjct: 425 CMIDDLANEDSPQIYTLVGRGALSAVKVLRNGLEVTEMAVSELPGNPNAVWTVKRNIDDK 484
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D+ +V+SFV T VL++ G VEE GF T C + +LQV P I
Sbjct: 485 FDSHIVVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLGCALIGDDALLQVYPDGIRHIR 543
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEV 332
+ RV+ W+ P ++I + N+ QV A G ++ Y E+
Sbjct: 544 ADR--RVNEWKAPGKRTIMKCALNRRQVAIALAGGELVYFEL 583
>gi|164658491|ref|XP_001730371.1| hypothetical protein MGL_2753 [Malassezia globosa CBS 7966]
gi|159104266|gb|EDP43157.1| hypothetical protein MGL_2753 [Malassezia globosa CBS 7966]
Length = 919
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 11/206 (5%)
Query: 1020 AHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDD--GKLQQI 1077
+H L E S KF P Y V+GT + GR+I + + KLQ I
Sbjct: 594 SHSLHAYERPNSACVKKFYNTP--YIVVGTGFYVGGRDSTSSGRLIGYTWSTPLSKLQLI 651
Query: 1078 AEKEIKGACYSMCEFNGK-LLASINSTVRLFEWTNEKELRLECSHFN-NIIALFLKVKGD 1135
++ G Y + + G L+A++++ V + + K L+L C + +A L +G
Sbjct: 652 WSCDVPGHVYGVTDVPGSYLVAAVDAQVHTYALCDGK-LKL-CDRWGCAFLATCLTSQGS 709
Query: 1136 FILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE--LFLGAENSYNLFIC 1193
++VGD M SLT+LQ +G EI+RD +P W T++ +L E ++G + + N+F+
Sbjct: 710 TVVVGDAMHSLTVLQVDP-KGQLHEIARDVDPYWTTAVGVLSTEQQQYIGTDIAMNMFVA 768
Query: 1194 QKDSAATSDEDRTHLQEVGTVHLVGD 1219
++ + +H+ T GD
Sbjct: 769 ERVHQTDGTDPWSHVMHRATAFHHGD 794
Score = 44.7 bits (104), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R LL G +++L + T + ++++ + P+ L+ L VF+ S G
Sbjct: 130 RVLLSTTRGSMYILTVSSSTNAWETIHMHLLRLQMSSVATSPQGLSSLGEDFVFLASTTG 189
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
DS L ++ SP + Y + + API+DMV+ + +++T SG SLR
Sbjct: 190 DSVLWHVDSSPSLHEVY-----RWPSTAPIVDMVLDN--SSVMDRIITASGAGPTSSLRA 242
Query: 201 I 201
I
Sbjct: 243 I 243
>gi|170580631|ref|XP_001895346.1| splicing factor 3B subunit 3 [Brugia malayi]
gi|158597745|gb|EDP35799.1| splicing factor 3B subunit 3, putative [Brugia malayi]
Length = 1181
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 110/520 (21%), Positives = 201/520 (38%), Gaps = 87/520 (16%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+L+ G +F + LE E + V E K++ I + + L G +F S G+
Sbjct: 280 FLVQTDQGDIFKVTLESEHDI-----VTELKIKYFDTIPVSNAMCILKTGFLFTASEFGN 334
Query: 142 SQLVKLNRSPDENG-----------------------TYVSVMESFTNLAPIIDMVVVDL 178
L ++ DE+ T +++++ +L+P+I
Sbjct: 335 HHLYQIAHLGDEDDEPEFSSRMQLEEGETFFFAPRGLTNLAIVDQMDSLSPLI-FFPTRT 393
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVL 238
Q + G K L + C+ +P +W + D+ +V+
Sbjct: 394 RCTFSSQSIAQWFGGKRKWLSL----------NCLVIP--NAVWTVKRNIDDKFDSHIVV 441
Query: 239 SFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDP-----RTVLQVTPSAAILISTE 293
SFV T VL++ G VEE GF T C + RTV + L+S
Sbjct: 442 SFVNATLVLSI-GETVEEVTDSGFLGTTPTLGCALIGDDALCIRTVFDILGLIGELMSGR 500
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYY--LEVHGSEIKQLAHRALEYEVA 350
V + + N+ QV A G ++ Y L+V G + R L +V
Sbjct: 501 HLVNVQLLK---------CALNRRQVAIALAGGELVYFELDVTGQLNEYTERRELPADVL 551
Query: 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEII------- 403
C+ +S + E +++ VGL D + R++SL + C PL ++I
Sbjct: 552 CMSLSEIPEGEL-----RSRFLTVGL-ADKTVRIISLDPQD--CLSPL--QLISFSMQAL 601
Query: 404 ---PRSILM-------TCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTV 453
P SI++ T +L + L +G + ++D +G LTD + LGT+
Sbjct: 602 PSEPESIIVLEMFGTETQSASTVHLNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTKSVK 661
Query: 454 LKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDS 513
L R S + A S R ++Y + + ++ + ++E P+ + ++
Sbjct: 662 LFRVRIQSKDAIMAASSRAWLLYDYQSRFHLTPLSYAALEFAAGFSSEQCPEGIVAIAEN 721
Query: 514 TFTFGTIDEIQKLHIRTV-PLGEAPRRIAYQESSQTFGVI 552
T +++++ + V PL PRR+ ++S +I
Sbjct: 722 TLRILSLEKLGAVFNHVVHPLDYTPRRMVVHKASGNLIII 761
>gi|440301427|gb|ELP93813.1| DNA repair protein xp-E, putative [Entamoeba invadens IP1]
Length = 1001
Score = 73.2 bits (178), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 14/180 (7%)
Query: 1045 FVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTV 1104
+V+GTA++ E EP GR+++ DGKL E +GA Y++ +F +LA IN +
Sbjct: 719 YVIGTAIIKENEVEPTVGRLLVAEEVDGKLVLKCTHEFEGAVYAIKKFKQHVLALINRHL 778
Query: 1105 RLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS-FEEISR 1163
+ + TNE L N+I + ++V GD+I+VGD M+S+T+ K+ + S E+
Sbjct: 779 HVMDITNESVLPRNIIEL-NMIGVCMEVLGDYIIVGDFMKSVTVFVCKSDDLSQTEKAWT 837
Query: 1164 DYNPNWMTS---IEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQE----VGTVHL 1216
D +W+ + IE D F+ + N+ I K E+R ++++ VG +H+
Sbjct: 838 DIAVSWVNAVGCIENGDSNKFVSCDVDGNVKIFVK-----GGEERWYIEDLLKCVGKIHV 892
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 682 IITQRTDLN--LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFI 739
+++Q T + LVV+K N +E + + EGL + KI V+ ++ D+ + + +
Sbjct: 23 VVSQMTQTHKILVVSKFNILEFYQINTEGLLFLVSKRYPSKIEVLLKYKPVKDEDEYIIV 82
Query: 740 ITQRYNAMILECRGDIDNLEILTKAH----GNVSDRIGKPSENGIIAIIDPEARVIGLRL 795
+T ID +++ T H G +SD G+ S G+ A++ P + + L +
Sbjct: 83 VTASVQ---------IDVIKLTTNLHVVSSGFLSDPFGRLSFYGMKAVVSPNGQYLLLHI 133
Query: 796 YNGLFKIIPL-EKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDV-NGRHVKTH 853
Y L K + L ++ + ++ A++ ++ I D F T++ +H++ + RHV T+
Sbjct: 134 YEQLIKFVKLPQRPSDKIFATNSKISINRIIDFSFCTIADQETVVFLHENSRDTRHVNTY 193
Query: 854 EISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSG 902
I + F K+ + Q N+ LV+ +P + G ++I E+ Y +G
Sbjct: 194 IID-DHQNFVKSTFSQPNVGSSTRLVLGLPNGVNGVLVISDETACYFTG 241
>gi|255725990|ref|XP_002547921.1| hypothetical protein CTRG_02218 [Candida tropicalis MYA-3404]
gi|240133845|gb|EER33400.1| hypothetical protein CTRG_02218 [Candida tropicalis MYA-3404]
Length = 1053
Score = 73.2 bits (178), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 151/339 (44%), Gaps = 29/339 (8%)
Query: 156 TYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDL 215
T ++++++ L+PI+D +D +LVT S L+ + +GI L
Sbjct: 398 TNLALIDTLETLSPILDAKSID------SKLVTLSS---HSYLKTVTHGIPTSTMVESPL 448
Query: 216 PGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFYCGN 273
P I I+ + D LV+S ++ L LS G VE+ E F DQ T
Sbjct: 449 PVIPTDIFTTKLSFESENDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQPTIAVQQ 508
Query: 274 VDPRTVLQVTPSAAILIS--TESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLE 331
V +V+Q+ + + K +++ W PP G +I+ + N QVL A LE
Sbjct: 509 VGKNSVVQIYTNGIKHVRQINGEKKKITDWLPPAGITITHAATNNQQVLIALSN----LE 564
Query: 332 VHGSEIKQLAHRALEYEVACLDIS----PLSNEETSSEPAKAQLAAVGLWTDISARLLSL 387
V EI L + +EY+ L++S L+ EE ++ ++ A +G +D + +++SL
Sbjct: 565 VVYFEIDHLDDQLIEYQ-ERLELSSSTTALAIEEHTNNHHQSPFAIIG-CSDETIQVVSL 622
Query: 388 PSLEEVCKEPLGGEIIP---RSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKK 444
++ C E + + S+ M + + + +G +DP +G+L+D +
Sbjct: 623 K--QQNCLEIQSIQALSSNCSSVKMIKLGKDLMVHIGMNNGVYARIKIDPINGKLSDSRI 680
Query: 445 VTLGTQPTVLKTFR-SLSTTNVFACSDRPTVIYSSNHKL 482
LG++P L + + T V A S + + Y H+
Sbjct: 681 KYLGSKPVKLNIVKINKEITGVLAVSSKSWIGYYYKHEF 719
>gi|402579535|gb|EJW73487.1| hypothetical protein WUBG_15606 [Wuchereria bancrofti]
Length = 254
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 111/240 (46%), Gaps = 26/240 (10%)
Query: 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D+ +V+SFV T VL++ G VEE GF T C + +LQV P I
Sbjct: 13 FDSHIVVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLGCALIGDDALLQVYPDGIRHIR 71
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYY--LEVHGSEIKQLAHRALEYE 348
+ RV+ W+ P ++I + N+ QV A G ++ Y L+V G + R L +
Sbjct: 72 ADR--RVNEWKAPGKRTIMKCALNRRQVAIALAGGELVYFELDVTGQLNEYTERRELPAD 129
Query: 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRS-- 406
V C+ +S + E +++ VGL D + R++SL + C PL + +P
Sbjct: 130 VLCMSLSEIPEGE-----LRSRFLTVGL-ADKTVRIISLDPQD--CLSPLSMQALPSEPE 181
Query: 407 --ILMTCF------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR 458
I++ F +L + L +G + ++D +G LTD + LGT+ +K FR
Sbjct: 182 SIIVLEMFGTEIQSASTVHLNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTKS--VKLFR 239
>gi|294889072|ref|XP_002772683.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
gi|239877121|gb|EER04499.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
Length = 229
Score = 72.4 bits (176), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-------IKGIWA----LSIGSPKNLD 233
Q+ SG +LRI+R+G+ + E +LPG IK A ++ G ++ D
Sbjct: 34 QIYALSGRGPRSALRILRHGLTLGEAGASELPGQPNALFTIKPFGASYAPVAEGEVES-D 92
Query: 234 NTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE 293
+V+SFV T L ++ + E GF +Q T + + ++ +QV P+ +
Sbjct: 93 RYIVVSFVDQTLTLLVTSDNIHEVTDSGFAKEQPTLFAMRMQDKSAIQVMPTG--IRHVA 150
Query: 294 SKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGS---EIKQLAHRALEYEV 349
+ R + W P G+ +++ + N +QV+ A +G ++ E+ + ++A R + EV
Sbjct: 151 AGRRTTEWRAPPGRQVTMAASNGSQVVIALSGGEIQLFELDADTNGHLSEVAKRDIGCEV 210
Query: 350 ACLDISPLSNEETSSE 365
A L + PLS+ T S+
Sbjct: 211 AALTVQPLSSGRTRSQ 226
>gi|403224220|dbj|BAM42350.1| splicing factor 3b subunit [Theileria orientalis strain Shintoku]
Length = 1272
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 170/434 (39%), Gaps = 70/434 (16%)
Query: 91 LFMLLLEKEE----KMDGTF---SVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQ 143
F +LL+ E K+D + VKE V + + + L +G +FV S GD
Sbjct: 296 FFFILLQSEYGDLYKVDLNYDDAQVKEIVVRYFDTVELATSMCILRSGYLFVASEFGDHH 355
Query: 144 LVKL-------------NRSPDENGTYVSV----------MESFTNLAPIIDMVVVDLER 180
+ + + P ++ + +L+ I+DM VVD+
Sbjct: 356 VYQFTDLGSNEKDPMCTSLHPHSKSAIIAFKPRVLQNLYETDKLPSLSSIVDMKVVDVMG 415
Query: 181 QGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGS-PKNLDNTLVLS 239
G + + G + L+ +R G+ EE A +LPG + +I S N D +++S
Sbjct: 416 TGDYEFIMGCGRWYNSRLKSLRYGLSTEELAFNELPG-RPRAVFTIKSLESNYDEFIIVS 474
Query: 240 FVGHTRVLTLSGAEVEETEMGGFTSDQQTFYC----------------GNVDPRTVLQVT 283
F G+T VL++ A E T+ TS C G V +QV
Sbjct: 475 FQGNTLVLSIGEAVEEVTDSFFLTSITTLHSCYMSNYHATESLEGRFEGGVSDGIFVQVH 534
Query: 284 PSAAILISTESKARVSSWEPPNGKSIS-VVSCNKNQVLCATGCDVYYLEVHGSEIKQLAH 342
S V W+ P+ K + + +L +G +V Y E+ ++++++A
Sbjct: 535 DSG---FRYSHGQVVKEWKVPSTKRVKLADNNLNQLLLVLSGGEVVYFELVDNDLEEVAK 591
Query: 343 RALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVC-KEPLGGE 401
R L E+ C+ + + K + VG +I R+L L ++C + L
Sbjct: 592 RNLSTEITCVALQHTPASKAGERVRKGEFCCVGSIDNI-IRVLKLDKTLKMCSSQLLSNN 650
Query: 402 IIPRSILMTCFE---------------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVT 446
+P S+ + E YL V L +G + ++D + G L+D++
Sbjct: 651 ALPESLALVTAETGSGSGGGSSGGLGESESYLYVGLNNGILIRNNVD-SLGNLSDQESRF 709
Query: 447 LGTQPTVLKTFRSL 460
+GT+ LK L
Sbjct: 710 MGTKAVKLKLVHYL 723
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 1055 EENEPKQGRIIIFHYDDG-----------KLQQIAEKEIKGACYSMCEFNGKLLASINST 1103
++N+ +G I ++ Y+ KL + + C++ E N LL +I +
Sbjct: 979 QDNDEVEGCIRVYEYNSNYSNLATSGMNIKLLHVTNTKGWIRCFNNYE-NKLLLCAIGTR 1037
Query: 1104 VRLFEWTNEKELRLECSH--FNNIIALFLKVKGDFILVGDLMRSLTLLQ---YKTMEGSF 1158
+R++ +K+L L+ H N + +KV G I GD+ S+ LL+ Y G F
Sbjct: 1038 LRMYAL-GKKQLLLKGEHRSLTNYGFMDIKVIGSRIYCGDIRESVQLLRIKFYGEETGEF 1096
Query: 1159 EEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ 1194
E + P W++++E+LD + A+ ++F+ +
Sbjct: 1097 EMTATSTGPRWLSTMELLDYSTVMAADKFDSVFVAR 1132
>gi|321475208|gb|EFX86171.1| hypothetical protein DAPPUDRAFT_313209 [Daphnia pulex]
Length = 1260
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 717 LYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRI--GK 774
L+GK+ + P +D + + ++E DNL+ L+ + V + G
Sbjct: 74 LFGKVMSIAAVSLPGSSQDTILMSFAHAKLSLIEYDPVSDNLKTLSLHNFEVVSILDEGI 133
Query: 775 PSENGIIAI-IDPEARVIGLRLYNGLFKIIPLEKD-----NFELKASSIRMEELE----- 823
S + I I +DPE R L ++ I+P KD N L + I++ +LE
Sbjct: 134 GSNHKIPEIRVDPEGRCAALLIFRNTLAILPFRKDSAHDSNVTLSSYIIKLTDLEERVDN 193
Query: 824 IQDVQFLHGCQNPTIICIHQDVN---GRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
+ DVQFLHG PT+I +++ V GR + +SL ++ W +++
Sbjct: 194 VIDVQFLHGYYEPTLIILYEPVGTFPGRIAVRQDTCNMVAVSLNTQQRVHPIIWSLNSLP 253
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ S ++PVP+PLGGA+I+ S++Y
Sbjct: 254 FDCSQLLPVPKPLGGALIMAVNSVIY 279
Score = 44.3 bits (103), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 1037 FGED---PNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFN 1093
+GED F+L V PE +P K++ + K+ KG ++
Sbjct: 1074 YGEDIISRGRIFILDLIEVVPEPGQP---------LTKNKIKTLYAKDQKGPVAAISSVC 1124
Query: 1094 GKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT 1153
G L+A+I + L++ N+ + + I L +K FIL D+ +S+++L+++
Sbjct: 1125 GYLVAAIGQKIYLWQLKNDDLVGIAFIDTEIYIHQLLNIKS-FILAADVYKSVSILRFQE 1183
Query: 1154 MEGSFEEISRDYNPNWMTSIEILDDELFLG-----AENSYNLFICQKDS 1197
+ ++RDY P + +++ D LG AE + L++ Q ++
Sbjct: 1184 EYRTLCIVARDYQPLEVMAVDYYIDNTQLGFLVSDAEKNLILYMYQPEA 1232
>gi|429328598|gb|AFZ80358.1| hypothetical protein BEWA_032110 [Babesia equi]
Length = 1387
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 109/510 (21%), Positives = 201/510 (39%), Gaps = 80/510 (15%)
Query: 116 LGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN--RSPDENGTYVSVME-------SFTN 166
L IP + + N +F S++G++ +++ P + E + TN
Sbjct: 405 LYNCDIPSSIINIGNNTIFSTSKVGNTCTFRIDFGNKPSICSDSFKIEEFNVYKTWNQTN 464
Query: 167 LAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSI 226
L PI D + G ++ C G G I G+GI+ + GI ++++S
Sbjct: 465 LGPIADFTYGEENSHGNKSVLACCGMGSAGKFCSITLGVGIDTICSNTILGISNLFSVSS 524
Query: 227 GSPKNLDNTLVL--SFVGHTRVLTLSGAEVEETE----------------------MGG- 261
G K N +L SF +T+ +++ + T+ M G
Sbjct: 525 GGSKTDSNESILCCSFYRNTQFYSVNFVSMNNTQGNINSSLLDINEPNVGYVNKMVMDGS 584
Query: 262 -FTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNG--KSISVVSCNKNQ 318
F D++T N+D ++Q+T S+ I++S+ K +++ I S +N+
Sbjct: 585 TFREDERTILLSNIDKDKIVQITTSSIIILSSNPKLNRIAYKTVEEIMTEIDEGSEERNR 644
Query: 319 VLCATGCDVY---YLEVHGSEIKQLAHRALEY-EVACLDISPLSNEETSSEPAKAQLAAV 374
++ A C Y L H + I L + LE V L I+ S S A+ A+
Sbjct: 645 IVHACLCGSYIFIILSNHWAAI--LDGKKLEMVNVEPLSINISSVAYISHVKNSAEFLAL 702
Query: 375 GLWTDISARLLSLPSLEEV--CKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSL 432
W S +LS P+L+ V K I +S+ + + V+L DG + + +
Sbjct: 703 STWEKSSILILSFPNLDIVRRIKIECTFGIYIKSMKFGATNNNLFFFVSLSDGQLMVYKV 762
Query: 433 -------DPASGRLTDKKK------------VTLGTQPTVLKTFR-----------SLST 462
+ S +D K + L T L+ +L
Sbjct: 763 QMSRNITNAVSKGKSDVFKNDVEIDFILDSTMHLSNTCTKLEFLNLSNNYIHEQTCNLDC 822
Query: 463 TNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAE---SYPDSLALATDS--TFTF 517
N+ A + T I+S K+ F+ VN+ V+ +C++ + S +S+ +A S +
Sbjct: 823 NNIIAIGKQSTAIFSKRDKVEFAKVNISHVSCLCTIPTQRTSSEFNSVLIAYYSYPSLVI 882
Query: 518 GTIDEIQKLHIRTVPLGEAPRRIAYQESSQ 547
G +D I++ H++ + G ++ Y S+
Sbjct: 883 GKLDPIEQFHVQNIISGRTFDKVCYHVPSK 912
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 34/239 (14%)
Query: 1008 LIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIF 1067
L I+ ++ E+++ L P E+ +S + + + N ++GT+ V + P +G + I
Sbjct: 964 LFINVSSKEVIYNLNL-PREHLVSSLHTMSFDGTNEVILIGTSKVDESHDAPTEGFLYIV 1022
Query: 1068 ----HYDDGKLQQIAE--KEIKGACYSMCEFNGKLLASINSTVRLFEWT------NEKE- 1114
H +D + I K G + + ++N+ V NEK+
Sbjct: 1023 DISSHSEDRLVMTIQRTTKPFAGGVVEITSCGQNPVIAVNNVVLALSLCSNIGVRNEKDR 1082
Query: 1115 ------------------LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG 1156
L +E + +N + L + I+VGDLM S LL++K +
Sbjct: 1083 YDLEYLYACDDIIDSRQCLVVEAKYTSNTYVVSLDSCENNIIVGDLMTSAKLLRFK--DN 1140
Query: 1157 SFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVH 1215
F E+ RD+N W T++ +D + +++S N I K+ T+D Q +G H
Sbjct: 1141 CFYELCRDFNSIWCTAVASIDKNTSIVSDDSGNFSIFSKNETPTNDAQSAKFQVMGLFH 1199
>gi|388579257|gb|EIM19583.1| hypothetical protein WALSEDRAFT_33953 [Wallemia sebi CBS 633.66]
Length = 986
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 33/188 (17%)
Query: 20 DLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEWGFHLLRGFSSLGSLWNGWS 79
DL G++ + ++ SP+ +D + H V + A +RG++++ W
Sbjct: 212 DLKGVRRKSSTTVTSPQVVD-------MEHLSVKSPMAA------VRGYTAVNDSCTAW- 257
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
L+GD G ++ + + ++ L+G S+ L +L +G +F+GS+
Sbjct: 258 ---LIGDEKGDIYYISISNF-----------LEITLVGNSSVASTLQHLGSGFLFLGSQN 303
Query: 140 GDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
DS+L+ + +P + +E++TNLAP+ DM + + QGQLV CSG K G LR
Sbjct: 304 EDSKLLVVQTNP----VRIVELENYTNLAPVSDMALTHPDGI-QGQLVVCSGSNKTGKLR 358
Query: 200 IIRNGIGI 207
++ GIG+
Sbjct: 359 VVTTGIGL 366
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 11/168 (6%)
Query: 1045 FVLGTAVVHPEEN--EPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINS 1102
FV+GT + E E +GR II D K + + G Y++C + KL ++N
Sbjct: 732 FVVGTYYNNETEGTEEATKGRFIILLVKDDKFIIASSFLVPGCVYAVCGIDQKLAVAVNY 791
Query: 1103 TVRLFEWTNEKE----LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSF 1158
VR+++ + ++ +R S+ N + + L G ++V D ++S LQ T G+
Sbjct: 792 QVRVYDIESIRDDTYKMRFIASYGNAFVVVSLTSVGKILVVADFLKSAIYLQLDTERGAL 851
Query: 1159 EEISRDYNPNWMTSIEILDD---ELF--LGAENSYNLFICQKDSAATS 1201
++ D W + + LDD E F LGA+ ++LF + S+ +
Sbjct: 852 TQVGYDTAQRWSSLVVALDDGNEETFTTLGADIRFHLFALDRTSSGIT 899
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 377 WTDISARLLSLPSLEEV--CKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDP 434
WTD S ++ S E + CK I+ S+L+ + +L DGS++ F D
Sbjct: 512 WTDYSVNIVDSRSNELIYSCKSRDDTPIL--SLLVE----NKVVLAGSADGSLYAFRFDE 565
Query: 435 ASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNH 494
+ D + V +G+ P L RS + +FA D P+++ N +L +S++N+ +N
Sbjct: 566 HL-KSVDIQTVAIGSTPVCLT--RS-NDGLIFALCDVPSIVTLDNTRLRYSSININYING 621
Query: 495 MCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG-EAPRRIAYQESSQTFGVI 552
+ S + + + D + ++HI ++ +G + PR++AY+E G +
Sbjct: 622 LTSYKTNDMVNYVFVQNDQLKFSRILSTENRVHIHSIEMGADVPRQVAYKEDRYAVGCV 680
>gi|449661926|ref|XP_002167992.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Hydra magnipapillata]
Length = 1122
Score = 70.1 bits (170), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 129/292 (44%), Gaps = 41/292 (14%)
Query: 79 SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSR 138
+++++L G +++L L DG +V+ E + C+ ++++G VF+GSR
Sbjct: 334 TDQFILSLKGGEIYVLSLLS----DGLRTVRSFHFEKAAGSVLASCVCWIEHGFVFLGSR 389
Query: 139 LGDSQLVKLNR----SPDENGTYVSV--------------MESFTNLAPIIDMVVVDL-- 178
LG+S L++ S E V +S N+ PI + +
Sbjct: 390 LGNSLLLRYTEKDSASIAEKSKEAKVEKMYGGGVGGGIIVCDSLLNIGPITKAALGEPAF 449
Query: 179 -------ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPK- 230
RQ ++V CSG K G+L +++ I + +LPG +W + S K
Sbjct: 450 LSEEFFGSRQIDLEMVCCSGYGKNGTLTVLQRSIRPQVVTTFELPGCVNMWTVCGKSSKE 509
Query: 231 ---NLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQT-FYCGNVDPRTVLQVTPSA 286
N + L+LS T VL +GAE+ E + GF Q T F C ++ + +LQV P +
Sbjct: 510 SVENYHSYLILSRDDSTMVLK-TGAEITELDNSGFNVQQPTIFACNHLSNKYILQVCPQS 568
Query: 287 AILISTESKARVSSWEPPNGKSISVVSCNKNQVLC--ATGCDVYYLEVHGSE 336
L+ E +++S + I+ S + V+ +TG +Y + SE
Sbjct: 569 IHLL--EDTVQINSISLQDTIKITQCSISDPYVVMVDSTGQLIYLQVIEDSE 618
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 103/249 (41%), Gaps = 40/249 (16%)
Query: 688 DLNLVVAKNNRIE--IHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYN 745
D ++VV+ ++ + +V L + L+G I M+ R ++ +D L + +
Sbjct: 45 DADMVVSDGDQSSKIVDSVGKRRLELLASFTLFGNIINMQVVRLGSNVRDSLLLAFKHAK 104
Query: 746 AMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAII--DPEARVIGLRLYNGLFKII 803
I+E +L+ + + + G S N + ++ DPE R + +YN ++
Sbjct: 105 LSIVEFDPLSHDLKTDSMHYFENDEFKGGLSHNIYLPLVRVDPEQRCACMLIYNRHLVVL 164
Query: 804 PLEKD--------------------NFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQ 843
P + D ++ + S+ L I ++QFLHG PT++ + +
Sbjct: 165 PFKHDIKLDESEELSDGEHIKSVLPSYMIDLHSLEQPLLNITELQFLHGYHQPTLMFLFE 224
Query: 844 DVNGRHVKTHEISLKEKEFTKTP-------------WKQDNIEMEASLVIPVPEPLGGAI 890
V T +++++ F + W N+ + ++ P+ +P+GG +
Sbjct: 225 PV---QTSTGRVAVRQDTFCVSAISLNMTEKVHPVIWSVTNLPFDCHMLRPIEKPIGGVL 281
Query: 891 IIGQESILY 899
+ S++Y
Sbjct: 282 VFASNSLIY 290
>gi|116191283|ref|XP_001221454.1| hypothetical protein CHGG_05359 [Chaetomium globosum CBS 148.51]
gi|88181272|gb|EAQ88740.1| hypothetical protein CHGG_05359 [Chaetomium globosum CBS 148.51]
Length = 979
Score = 70.1 bits (170), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 150/359 (41%), Gaps = 47/359 (13%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFS--VKEPKVELLGEISIPECLTYLDNGVVFVGS-- 137
+LL G LF L +E +G + V K+ + + L L +G + V S
Sbjct: 85 FLLQTEDGDLFKATLGMQEDGEGNLTGEVNCIKLRYFDTVPVASSLCILKSGFLLVASEF 144
Query: 138 ---------RLGDSQL-VKLNRS-------PDENGTYVSVMESFTNLAPIIDMVVVDLER 180
+LGD Q+ NR P +G +S++E+ ++ PI+ VV+L R
Sbjct: 145 ENHHLYQFEQLGDDQVEFNSNRDIAPVFFDPQPSGN-LSLVETIESMNPILASGVVNL-R 202
Query: 181 QGQG--QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLV 237
+G Q+ + G RI+R+G+ + E +LPG + +W + S D ++
Sbjct: 203 EGDDAPQIYSACGSGTRSHFRILRHGLEVNEIVASELPGTVSAVWTTKLTSQDKHDTYII 262
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR 297
L+ T VL++ G EV++ GF + T + ++ QV P I S +
Sbjct: 263 LTSSTDTLVLSI-GEEVKQVSDSGFLTSVSTLAIQQIGDDSLAQVHPKGIRHI--RSSDQ 319
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEV---HGSEIKQLAHRALEYEVACLD 353
+ W P ++I + N+ QV A + ++ Y E+ GS + + V CL
Sbjct: 320 IIEWPAPQHRTIVATATNQRQVAVALSSGEIIYFELDDADGSLAEYDGREEMSGTVTCLS 379
Query: 354 ISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP--------SLEEVCKEPLGGEIIP 404
+ + ++ AVG D + R+LSL S++ + P IIP
Sbjct: 380 LGQVPEGRL-----RSSFLAVGC-DDRTIRILSLDPESTLESRSVQALTAAPSALAIIP 432
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 11/219 (5%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSL-ISSKFGEDPNTYFVLGTA---VVHPEENEPKQGRI 1064
I+D ++ L E A SL I+S +D ++ V+ T V++P + +
Sbjct: 547 IVDPIGETVIRTIHLQENEAAASLAIASFTSQDDESFLVVSTGRDMVLNPRQLSGGYSYV 606
Query: 1065 IIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNN 1124
FH D L+ I + ++ F G+L+A I T+ +++ ++ LR + N+
Sbjct: 607 YRFHDDGRDLELIHKTGTTEPPTALEAFRGRLVAGIGKTLVVYDLGLKQMLR--KTQAND 664
Query: 1125 IIA---LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF 1181
++ + L+ +G+ I+VGD+ + ++ Y+T D W T ++D +
Sbjct: 665 VVPGLIVSLQTQGNRIVVGDVQHGVAMVAYRTESNQLIPFVDDTIARWTTCTTMVDYDSV 724
Query: 1182 LGAENSYNLFICQKDSAAT--SDEDRTHLQEVGTVHLVG 1218
G + N +I + A+ +DE H HL G
Sbjct: 725 AGGDKFGNFWIVRTPQQASLEADEPGAHRLLHAREHLHG 763
>gi|189208368|ref|XP_001940517.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976610|gb|EDU43236.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1247
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 141/701 (20%), Positives = 247/701 (35%), Gaps = 86/701 (12%)
Query: 84 LGDLAGRLFMLLLEKEEKMDGTFSVKEP-------KVELLGEISIPECLTYLDNGVVFVG 136
L L G F LL+ E+ +V P K++ I I + L G V+
Sbjct: 294 LYSLKGGDFFYLLQTEDGDVFKLTVDAPSGTVEKIKIKYFDTIPIVTSICILRAGFVYAA 353
Query: 137 SRLGDSQLVKLNRSPDENGTYV---------------------------SVMESFTNLAP 169
GD L +L DE V + +ES +L P
Sbjct: 354 CESGDRILYELESLGDETDDPVFESDQFPVDPDTSFAPPFFKPRALVNFTPVESMPSLNP 413
Query: 170 IIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP-GIKGIWALSIGS 228
I+ M V + + Q+ T +G S R RN + + + LP +W + S
Sbjct: 414 IMGMEVANPALEDAPQVYTINGTSGRSSFRTTRNALEVLDLIESPLPQNASDVWTTKLTS 473
Query: 229 PKNLDNTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAA 287
D +VL H+R L L G +VEE GF D T ++Q+ P
Sbjct: 474 GDEADTLIVLCL--HSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGI 531
Query: 288 ILI---------STESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEI 337
I + + A + W PP ++I + N QV A + + Y E
Sbjct: 532 RHIQGIQFPNDDADATHANLMDWHPPAHRTIVACATNNRQVAIALSSGQILYFECDSDGS 591
Query: 338 KQLAHR--ALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL-PSLEEVC 394
+A +L+ + CL + + +A AVG +D + R+ +L P ++
Sbjct: 592 LAMAEEEISLDSTINCLAMP-----DVPEGSVRAFFLAVGC-SDQTVRIFNLSPDMDGNI 645
Query: 395 KEPLGGEII--PRSILMTCF------EGHC-YLLVALGDGSMFYFSLDPASGRLTDKKKV 445
+ + + P S L F G +L + L G LD +G + D ++
Sbjct: 646 LRSISVQALTSPPSDLTINFMKDRSPRGESQFLHIGLRSGVYIRSVLDEMTGDIGDTRRR 705
Query: 446 TLGTQPTVLKTFRSLS-TTNVFACSDRPTVIYSSNHK--LVFSNVNLRQVNHMCSLNAES 502
LG +P ++ + + A + RP + Y+ L + +N + +
Sbjct: 706 FLGPEPIKFAKVNDVAGSPGILAMTSRPWLGYTHPRTGVLQLTPLNYIPFKSAWNFDGSQ 765
Query: 503 YPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEAD 562
+ + ++T+ F D + L PR++ F VI + + AD
Sbjct: 766 FKGIICVSTNELRIFTFNDLTDNTTYENISLKYTPRKMVGYHEQGVFYVIQSDNNTISAD 825
Query: 563 GSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTF 622
R Q S + + G T AD + E E +
Sbjct: 826 ----RRQQLIAQGNTKEDSNVEQENDTNGGMELVETNGDAADGSTESEEFPAIDFGYPRA 881
Query: 623 ERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFI 682
E ++ S + +V + +HTV G + + A + FF ++ L
Sbjct: 882 EGSWASC--IQVVDPVTEKAVVHTVEINGNQSLVS-------AALVFFESRGNEAFLAVG 932
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAV 723
+ + + I+++ ++P+G +EI L+ + AV
Sbjct: 933 LAKDLSFQPFKFSSASIQVYKISPDG----REIELFNETAV 969
>gi|440505190|gb|AGC10166.1| damage-specific DNA-binding protein 1, partial [Tachycineta meyeni]
gi|440505192|gb|AGC10167.1| damage-specific DNA-binding protein 1, partial [Tachycineta meyeni]
gi|440505196|gb|AGC10169.1| damage-specific DNA-binding protein 1, partial [Tachycineta
albiventer]
gi|440505198|gb|AGC10170.1| damage-specific DNA-binding protein 1, partial [Tachycineta meyeni]
gi|440505210|gb|AGC10176.1| damage-specific DNA-binding protein 1, partial [Tachycineta
stolzmanni]
gi|440505212|gb|AGC10177.1| damage-specific DNA-binding protein 1, partial [Tachycineta
leucorrhoa]
gi|440505214|gb|AGC10178.1| damage-specific DNA-binding protein 1, partial [Tachycineta
albilinea]
gi|440505218|gb|AGC10180.1| damage-specific DNA-binding protein 1, partial [Tachycineta
albiventer]
gi|440505220|gb|AGC10181.1| damage-specific DNA-binding protein 1, partial [Tachycineta
albilinea]
gi|440505222|gb|AGC10182.1| damage-specific DNA-binding protein 1, partial [Tachycineta
albilinea]
gi|440505224|gb|AGC10183.1| damage-specific DNA-binding protein 1, partial [Tachycineta
albiventer]
gi|440505226|gb|AGC10184.1| damage-specific DNA-binding protein 1, partial [Tachycineta
thalassina]
gi|440505234|gb|AGC10188.1| damage-specific DNA-binding protein 1, partial [Tachycineta
leucorrhoa]
gi|440505236|gb|AGC10189.1| damage-specific DNA-binding protein 1, partial [Tachycineta
thalassina]
gi|440505238|gb|AGC10190.1| damage-specific DNA-binding protein 1, partial [Tachycineta
thalassina]
gi|440505256|gb|AGC10199.1| damage-specific DNA-binding protein 1, partial [Tachycineta
cyaneoviridis]
gi|440505258|gb|AGC10200.1| damage-specific DNA-binding protein 1, partial [Tachycineta
cyaneoviridis]
gi|440505260|gb|AGC10201.1| damage-specific DNA-binding protein 1, partial [Tachycineta
cyaneoviridis]
gi|440505262|gb|AGC10202.1| damage-specific DNA-binding protein 1, partial [Tachycineta
euchrysea]
Length = 38
Score = 69.7 bits (169), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 1056 ENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFN 1093
E EPKQGRI++FHY DGKLQ +AEKE+KGA YSM EFN
Sbjct: 1 EAEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFN 38
>gi|147839354|emb|CAN61260.1| hypothetical protein VITISV_043608 [Vitis vinifera]
Length = 831
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%)
Query: 758 LEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSI 817
E + A G+VSDRIG+P++NG I IIDP+ R+IGL LY+GLFK+IP + +A +I
Sbjct: 762 FEKIYGAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNI 821
Query: 818 R 818
R
Sbjct: 822 R 822
Score = 44.3 bits (103), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 710 RPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHG 766
+P+ ++ +YG+IA ++ FR + +D LFI T+RY +L+ D +N E++ +G
Sbjct: 481 KPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQW--DAENSEVIASIYG 535
>gi|330932624|ref|XP_003303845.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
gi|311319874|gb|EFQ88052.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
Length = 1247
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 112/534 (20%), Positives = 186/534 (34%), Gaps = 66/534 (12%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
YLL G +F L +E +V + K++ I I + L G V+ GD
Sbjct: 304 YLLQTEDGDVFKLTVEAPSG-----TVDKIKIKYFDTIPIATSICILRAGFVYAACESGD 358
Query: 142 SQLVKLNRSPDENGTYV---------------------------SVMESFTNLAPIIDMV 174
L +L DE V + +ES +L PI+ M
Sbjct: 359 RILYELESLGDETEDPVFESDQFPVDPEASFAPPFFKPRALVNLTAVESMPSLNPIMGME 418
Query: 175 VVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP-GIKGIWALSIGSPKNLD 233
V + + Q+ T +G S R RN + + + LP +W + S D
Sbjct: 419 VANPALEDAPQVYTINGTSGRSSFRTTRNALEVLDLIESPLPQNASDVWTTKLTSEDEAD 478
Query: 234 NTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILI-- 290
+VL H+R L L G +VEE GF D T ++Q+ P I
Sbjct: 479 TLIVLCL--HSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHIQG 536
Query: 291 -------STESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAH 342
+ + A + W PP ++I + N QV A + + Y E +A
Sbjct: 537 IQFPNDDAGATHANLMDWHPPAHRTIVACATNNRQVAIALSSGQILYFECDSDGSLAMAE 596
Query: 343 R--ALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS------LEEVC 394
+L+ + CL + + +A AVG +D + R+ +L L +
Sbjct: 597 EEISLDSTINCLAMP-----DVPEGSVRAFFLAVGC-SDQTVRIFNLSPDMDGNILRSIS 650
Query: 395 KEPLGGEIIPRSI-LMTCFEGHCY---LLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQ 450
+ L +I LMT Y L + L G LD +G + D ++ LG +
Sbjct: 651 VQALTSPPSDLTINLMTDRSPRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPE 710
Query: 451 PTVLKTFRSLSTTNVFACSDRPTVIYSSNHK--LVFSNVNLRQVNHMCSLNAESYPDSLA 508
P + A + RP + Y+ L + +N + + + +
Sbjct: 711 PIKFAKVTVAGEPGILAMTSRPWLGYTHPRTGVLQLTPLNYIPFKSAWNFDGSQFKGIIC 770
Query: 509 LATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEAD 562
++ + F D + L PR++ F VI + + AD
Sbjct: 771 VSANELRIFTFNDLTDNTTYENISLRYTPRKMVGYHDQGVFYVIQSDNNTISAD 824
>gi|159486547|ref|XP_001701300.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
gi|158271783|gb|EDO97595.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
Length = 1078
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 30/243 (12%)
Query: 107 SVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDEN-------GTYVS 159
+V E KV+ I + + L G +F S G+ L + + +++ V+
Sbjct: 305 AVTEVKVKYFDTIPVTASIAVLKTGFLFAASEYGNHALYQFVGTGEDDDDVESSSAQLVA 364
Query: 160 VMESF-------------------TNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRI 200
E F +L PI DM V +L + Q+ G SL +
Sbjct: 365 TEEGFQPVFFEPRPLKNLLLIDEMASLMPITDMKVANLLGEEIPQIYALCGRGPRASLSV 424
Query: 201 IRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
+R G+ + E A LPG +W + + D +V+SF T V ++ G EV+ET
Sbjct: 425 LRPGLAVTELAVSPLPGAPTAVWTVRRAASDEYDAYIVVSFANATLVFSI-GEEVKETNE 483
Query: 260 GGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
GF T + + ++LQV P L R++ W+ P + I + N QV
Sbjct: 484 SGFLGTVPTLHTQLLADNSMLQVYPGG--LRHIRPDRRINEWKVPGRRVIKAAASNDKQV 541
Query: 320 LCA 322
A
Sbjct: 542 AIA 544
Score = 45.1 bits (105), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 5/134 (3%)
Query: 1064 IIIFHYDDG--KLQQIAEKEIKGAC-YSMCEFNGKLLASINSTVRLFEWTNEKELRLECS 1120
I ++ DG +L + + ++ G ++ F G+LLA + T+RL++ +K LR +C
Sbjct: 788 IRVYRLGDGGRRLDLLHKTQVDGGVPGALAGFKGRLLAGVGPTLRLYDMGKKKMLR-KC- 845
Query: 1121 HFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDEL 1180
+N +FL V S+ +++YK + +F + D P +++++ LD +
Sbjct: 846 EYNRWTNIFLHVFFYRPYFRSSQESVHMMRYKKADNAFYIFADDVAPRYLSALLPLDYDT 905
Query: 1181 FLGAENSYNLFICQ 1194
+ NL I +
Sbjct: 906 IATGDKFGNLVILR 919
>gi|428182571|gb|EKX51431.1| hypothetical protein GUITHDRAFT_134365 [Guillardia theta CCMP2712]
Length = 1295
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 111/526 (21%), Positives = 201/526 (38%), Gaps = 100/526 (19%)
Query: 85 GDLAGRLFMLLLEKEEKM--DGTFSVKEPKVELLGEISIP----ECLTYLDNG---VVFV 135
G++ R +L+ +E K+ F +V+LLG I P ++ L G V
Sbjct: 375 GNIKQREIILISTEEGKIWVAEIFQKASFEVKLLGSIDSPIVPSNIVSILGQGGYRRFLV 434
Query: 136 GSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQ---LVTCSGG 192
GDS ++ + + +E + +E T L D V+ + G ++ CSG
Sbjct: 435 NGDNGDSAVMMMRLNGNE--IEIETLERLTMLGVTTDFTVLSDKNVNGGDEFDVLVCSGT 492
Query: 193 FKEGSLRIIRNGIGIEEHACID---LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTL 249
K S+R +R G+ +E H + GI G++ ++ K+ + L ++F RVLT+
Sbjct: 493 GKHASIRRLRYGLPVETHVRSEKGLCDGIVGLYTITF-EQKHDQSFLFMAFTTGCRVLTV 551
Query: 250 SGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE------------SKAR 297
+ T+ G T + ++QV+ I+I S+
Sbjct: 552 GSELSDVTDDLGLNPTALTLHAAANSDGHLIQVSDEEVIVIQQPVLDSMDLDVIPCSQPE 611
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCAT--GCDVYYLE------------------------ 331
+ W P ISV + N V+C T G ++ L+
Sbjct: 612 RAVWRPAESTKISVSASLGNLVMCCTCGGTSIHILDTTRDQGSAGEFQIRGEITSFRSSE 671
Query: 332 -----------VHGSEIKQLA-----HRALEYEVACLDISPLSNEETSSEPAKAQLAAVG 375
HGSE ++++ AL+ + I L E+ E A++ +
Sbjct: 672 EVSCMAMTSLGAHGSETRKISIIGTYADALKARAGKIKIYSLGEEKREVELAQSIDLGIY 731
Query: 376 LWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLD-- 433
+D+S S+P + EP GG +L+V L +G + F+L+
Sbjct: 732 SGSDLSG---SVPQSFGILPEPAGG---------------VFLVVGLRNGKVIIFTLNAL 773
Query: 434 --PASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFA-CSDRPTVIYSSNHKLVFSNVNLR 490
P G T ++ L P + S + ++ A D ++ S L F + +
Sbjct: 774 SLPLVGLGTTRR---LAESPITFVSITSYAGPSLIALVEDVAFLVTPSRASLQFQRIGFQ 830
Query: 491 Q--VNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG 534
++H ++ P +A+ D +ID +KL ++T+PL
Sbjct: 831 PGGISHAAPFICDACPLGMAIVVDGQLKLVSIDRCEKLDVKTIPLA 876
>gi|440505216|gb|AGC10179.1| damage-specific DNA-binding protein 1, partial [Tachycineta
albilinea]
Length = 37
Score = 68.6 bits (166), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 1058 EPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFN 1093
EPKQGRI++FHY DGKLQ +AEKE+KGA YSM EFN
Sbjct: 2 EPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFN 37
>gi|260947152|ref|XP_002617873.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
gi|238847745|gb|EEQ37209.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
Length = 1242
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 185/448 (41%), Gaps = 52/448 (11%)
Query: 158 VSVMESFTNLAPIIDMVVVDLERQ----GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI 213
+S++E +L+P++D +++ QLVT + ++ + G+ + E
Sbjct: 423 LSLVEVLGSLSPLVDSTMLETYSSEFPDPLKQLVTLASN---SYMKTLTYGVPVSELVSS 479
Query: 214 DLP-GIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFYC 271
+P I+ I D+ LVL+ + + LS G VEE GF DQ T
Sbjct: 480 PVPINPTSIFTTKISKKSINDDYLVLTSSLTMKSMVLSIGEVVEEVSDSGFALDQHTIAV 539
Query: 272 GNVDPRTVLQVTPSAAILI-------STESKARVSSWEPPNGKSISVVSCNKNQVLCA-T 323
+ +++QV + I + R ++W PP G I S N QVL +
Sbjct: 540 QQIGQHSLVQVHNNGIRHIRNFFDDSDNVTSKRETNWYPPAGIVILHASTNNEQVLVGLS 599
Query: 324 GCDVYYLEVHGSEIKQLAHRA-LEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISA 382
+V Y E+ ++ + + ++ LE + L+++ + K+ A +G +
Sbjct: 600 NREVCYFEIDPADDQLIEYQERLEVTGGSITALALASKFVTEGDRKSNFAVIGTSEETIQ 659
Query: 383 RLLSLPS--LEEVCKEPLGGEIIPRSILMTCFEGHCYLL-VALGDGSMFYFSLDPASGRL 439
+ LP E V + L S+LM + Y + + + +G +D SG+L
Sbjct: 660 VISLLPKTCFEIVTLQALSANCF--SLLMMPLDKDNYFVHIGMINGVYARVRIDVVSGKL 717
Query: 440 TDKKKVTLGTQPTVLKTFR--SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497
D + LGTQP L++ +++++ + A S RP + Y +N SN L + +
Sbjct: 718 GDSRLKYLGTQPVSLRSLALPNVASSGILAISSRPWIGYFNNE----SNFKLTPLIDISI 773
Query: 498 LNAESYP------DSLALATDSTFTFGTI--------DEIQKLHIRTVPLGEAPRRIAYQ 543
+ ++ +S+ D T T+ D L I ++ L APR+ +
Sbjct: 774 KDGSAFYSEDIGIESVVGIRDGEITIFTVGGEEGEGFDVTNDLTISSIKLRYAPRK-QLK 832
Query: 544 ES--------SQTFGVITTRIDIQEADG 563
+S FGVI+ ++ +E D
Sbjct: 833 DSLTDYFFVIESEFGVISPYLESKEVDA 860
Score = 47.8 bits (112), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 10/196 (5%)
Query: 1007 LLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA---VVHPEE---NEPK 1060
L I+D I + H+ E +SL S K ++ Y ++GT V P N
Sbjct: 879 LQIVDVAGSGIEYTHEFTNNECTISLASIKIRDE--EYLIVGTTENLVYSPHYYSGNSIY 936
Query: 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECS 1120
RI +L + + I+ S+C FN KLL + +RL++ ++ LR +
Sbjct: 937 TFRIKRNAKKKPELVYLHKTTIEFPPSSLCAFNEKLLVGAGNQLRLYDVGRKQLLRKTST 996
Query: 1121 HFNNI--IALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
+ + I + GD I+V D S++ +++ + F D +T++E+LD
Sbjct: 997 KIDFLRRINKIQHIAGDVIVVCDSSESVSFMRFDQTKNQFIAFCNDTAKRQITALEVLDS 1056
Query: 1179 ELFLGAENSYNLFICQ 1194
+ + N+F+ +
Sbjct: 1057 RTVIAGDRFGNIFVSR 1072
>gi|68071595|ref|XP_677711.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497932|emb|CAI04454.1| conserved hypothetical protein [Plasmodium berghei]
Length = 493
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 1042 NTYFVLGTAVVHPEENEPKQGRIIIFHYDDG----KLQQIAEKEIK-GACYSMCEFNGKL 1096
NT +GTA ++ +EP G I IF +++ I + G + +F KL
Sbjct: 149 NTLICVGTANINDRVSEPSSGNIYIFFAKKKDNLFEIKHIYTHNVNVGGITHLKQFYDKL 208
Query: 1097 LASINSTVRLFEWTN------------EKELRLECSHFNNIIALF--------LKVKGDF 1136
+++IN+TV + + ++ K ++LE +A F L V ++
Sbjct: 209 ISTINNTVVILDISDFLINLDKYVDNTNKPIKLENDGTIVDVASFTPSSWIMSLDVIENY 268
Query: 1137 ILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKD 1196
I+VGD+M S+T+L Y + E+ RDY+ W T + L FL ++ N + QK
Sbjct: 269 IVVGDIMTSVTILSYDFNNSTLTEVCRDYSNVWCTFVCALSKSHFLVSDMESNFLVFQKS 328
Query: 1197 SAATSDEDRTHLQEVG 1212
S +DED L V
Sbjct: 329 SIRYNDEDSFKLSRVA 344
>gi|302654423|ref|XP_003019019.1| hypothetical protein TRV_07032 [Trichophyton verrucosum HKI 0517]
gi|291182709|gb|EFE38374.1| hypothetical protein TRV_07032 [Trichophyton verrucosum HKI 0517]
Length = 460
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
+T +L +L E A+S+ + F ++ T+ V+GT VV P I F
Sbjct: 96 HTKSVLSNLELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSPRTFTCGFIHIYRFQ 155
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
+ +L+ I + +++ ++ F G+LLA I +R+++ + LR + + +
Sbjct: 156 EEGKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIV 215
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK E + + D P W T ++D E G +
Sbjct: 216 GLQTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAGGDKFG 275
Query: 1189 NLFI--CQKDSAATSDED 1204
N+++ C ++ +DED
Sbjct: 276 NIWLLRCPTKASEEADED 293
>gi|302504585|ref|XP_003014251.1| hypothetical protein ARB_07556 [Arthroderma benhamiae CBS 112371]
gi|291177819|gb|EFE33611.1| hypothetical protein ARB_07556 [Arthroderma benhamiae CBS 112371]
Length = 460
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 6/198 (3%)
Query: 1013 NTFEILHAHQLFPGEYALSLISSKF-GEDPNTYFVLGTA---VVHPEENEPKQGRIIIFH 1068
+T +L +L E A+S+ + F ++ T+ V+GT VV P I F
Sbjct: 96 HTKSVLSNLELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSPRTFTCGFIHIYRFQ 155
Query: 1069 YDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIAL 1128
+ +L+ I + +++ ++ F G+LLA I +R+++ + LR + + +
Sbjct: 156 EEGKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIV 215
Query: 1129 FLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSY 1188
L+ +G I+V D+ S+T + YK E + + D P W T ++D E G +
Sbjct: 216 GLQTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAGGDKFG 275
Query: 1189 NLFI--CQKDSAATSDED 1204
N+++ C ++ +DED
Sbjct: 276 NIWLLRCPTKASEEADED 293
>gi|167539942|ref|XP_001741428.1| DNA repair protein xp-E [Entamoeba dispar SAW760]
gi|165894130|gb|EDR22214.1| DNA repair protein xp-E, putative [Entamoeba dispar SAW760]
Length = 1004
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 14/251 (5%)
Query: 683 ITQRTDLN---LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFI 739
IT + +LN LVV+K N +E++ + GL P+ I+++ ++ D D L I
Sbjct: 24 ITAQLNLNINYLVVSKLNLLELYEINSTGLIPLTTKRYSSGISLLLKYKPLKDITDYLII 83
Query: 740 ITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGL 799
+TQ IL+ L I++ G++ D G+ + G+ A I P +++ L LY L
Sbjct: 84 VTQSNEIEILKLTTSA--LHIISS--GSLKDTFGRKAFFGVKAAISPNNQILLLNLYEQL 139
Query: 800 FKIIPL---EKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNG-RHVKTHEI 855
K++ L KD +L AS+I++ I D+ F + + +H++ RH+ T+ +
Sbjct: 140 IKVVLLPQYPKD--QLTASNIKVNHSHILDMTFCLLNDSYQLALLHENKRDIRHIDTYTL 197
Query: 856 SLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKS 915
+ E K + Q N+ S ++ + + G +I E+ Y +G +
Sbjct: 198 N-SFNELEKGSFNQPNVGSNTSRILGFKDGIIGIFVISDETGCYFNGNGKHILCNLNQYP 256
Query: 916 STIVCYAKVDA 926
+T C+ K D
Sbjct: 257 NTACCFIKKDV 267
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 87/173 (50%), Gaps = 7/173 (4%)
Query: 1045 FVLGTAVVHPEENEPKQGRIIIFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINST 1103
+ +GTA++ E EP GRI++ D +G + + ++ GA Y + ++ ++A IN
Sbjct: 722 YAVGTAIIRENEIEPSSGRILLIRQDSEGLIYIVGTEDYDGAVYCLKKYQKGIVAFINRN 781
Query: 1104 VRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISR 1163
V + E K+L + + +I + L + D+I+ GDL RS+++ +Y+ + + +
Sbjct: 782 VHVIE-KKGKDLSTKQNMLLPLIGVSLDICKDYIIAGDLARSVSVYRYRNDIEHLDIVGK 840
Query: 1164 DYNPNWMTSIEILDDEL---FLGAENSYN--LFICQKDSAATSDEDRTHLQEV 1211
D W + + ++ E FL A+ S N +F ++ T DE + +V
Sbjct: 841 DNQIVWSSCVGSIESEYGTSFLVADVSGNIKIFNSNEEEPKTDDEKINLISQV 893
>gi|308466151|ref|XP_003095331.1| hypothetical protein CRE_19970 [Caenorhabditis remanei]
gi|308245509|gb|EFO89461.1| hypothetical protein CRE_19970 [Caenorhabditis remanei]
Length = 1097
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 25/254 (9%)
Query: 83 LLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDS 142
L+GD AGR+F L + + D T V + E + P LT L + +VFV +R G +
Sbjct: 275 LIGDNAGRMF---LGQFRRSDSTGPVNYEIYCIGAERTRPTLLTALKHNLVFVATRNGAA 331
Query: 143 QLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIR 202
V++ + + Y+ V + I D+V V E + LV G G LR+ +
Sbjct: 332 GFVRV--GIEYHKKYMHV-RNIDECEKINDLVSV--ETDIESYLVAACGQENSGVLRVFK 386
Query: 203 NGIGIEEHACIDLPGIKGIWALS--IGSPKN-LDNTLVLSFVGHTRVLTLSGAEVEETEM 259
+ E+H P I+ I+++ +GS +N + L LS TR + +G + E +
Sbjct: 387 RSVRFEQHQSYHFPNIQRIFSVPQVLGSNENEFSDMLALSRKDDTRYIVHNGTKFETWDQ 446
Query: 260 GGFTSDQQTFYCGN-VDPRTVLQVTPSAAILI----STESKARVSSWEPPNGK------- 307
G S+ +T + V + ++QV P I+ +T ++ S+ P G
Sbjct: 447 GRPFSNLKTIHLAYLVHHKCIVQVIPPGVIVFKYNDATNQWTQLCSYRSPIGTIKLADVD 506
Query: 308 --SISVVSCNKNQV 319
S ++++C+ N+V
Sbjct: 507 VMSGNIITCSGNEV 520
>gi|312118693|ref|XP_003151606.1| hypothetical protein LOAG_16070 [Loa loa]
gi|307753229|gb|EFO12463.1| hypothetical protein LOAG_16070 [Loa loa]
Length = 83
Score = 63.5 bits (153), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 41/56 (73%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLL 680
+F T+LNLV+AK NR+E+ VTPEGL+P +E ++G+IA +K FR P ++ LL
Sbjct: 22 SFIVPTELNLVLAKTNRVELFLVTPEGLKPHRECPVFGRIATIKLFRAPGEEDHLL 77
Score = 62.4 bits (150), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 687 TDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLL 737
T+LNLV+AK NR+E+ VTPEGL+P +E ++G+IA +K FR P ++ LL
Sbjct: 27 TELNLVLAKTNRVELFLVTPEGLKPHRECPVFGRIATIKLFRAPGEEDHLL 77
>gi|341893349|gb|EGT49284.1| hypothetical protein CAEBREN_30765 [Caenorhabditis brenneri]
Length = 213
Score = 63.5 bits (153), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 1143 MRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKD-SAATS 1201
MRS++LL Y+T+EG+FEE+++D+N WM + E + E LG E N+F + D S +
Sbjct: 1 MRSVSLLSYRTLEGNFEEVAKDWNSEWMVTCEFITAESILGGEAHLNMFTVEVDKSRPVT 60
Query: 1202 DEDRTHLQEVGTVHL 1216
D+ R L+ G +L
Sbjct: 61 DDGRYVLEPTGYWYL 75
>gi|70945139|ref|XP_742421.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56521397|emb|CAH76894.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 435
Score = 63.2 bits (152), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 24/195 (12%)
Query: 1042 NTYFVLGTAVVHPEENEPKQGRIIIFHYDDG----KLQQIAEKEIK-GACYSMCEFNGKL 1096
NT +GTA ++ +EP G I IF +++ I + G + +F KL
Sbjct: 92 NTLICVGTANINDRVSEPSSGHIYIFFAKKKANLFEIKHIYTHNVNVGGITHLKQFYDKL 151
Query: 1097 LASINSTVRLFEWT-----------NEKELRLECSHFNNIIALF--------LKVKGDFI 1137
+ +IN+TV + + + N + +LE +A F L V ++I
Sbjct: 152 ITTINNTVVILDISEFLINLDKYVDNTNKPKLENDGTIVDVASFTPSSWIMSLDVIENYI 211
Query: 1138 LVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDS 1197
+VGD+M S+T+L Y E+ RDY+ W T + L FL ++ N + QK S
Sbjct: 212 VVGDIMTSVTILSYDFNNSILTEVCRDYSNVWCTFVCALSKSHFLVSDMESNFLVFQKSS 271
Query: 1198 AATSDEDRTHLQEVG 1212
+DED L V
Sbjct: 272 IKYNDEDSFKLSRVA 286
>gi|241560031|ref|XP_002400960.1| spliceosomal protein sap, putative [Ixodes scapularis]
gi|215501812|gb|EEC11306.1| spliceosomal protein sap, putative [Ixodes scapularis]
Length = 1019
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 30/199 (15%)
Query: 1027 EYALSLISSKFGEDPNTYFV--------------------LGTAVVHPEENEPKQGRIII 1066
E ALS+ +F P+ FV L T + P EP G
Sbjct: 680 EAALSVALVRFTSHPDEQFVVVGAAREMQLNPRVCRGGGLLLTYRLAPNPEEPMAGPT-- 737
Query: 1067 FHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNI 1125
+L+ + ++ A ++C F G+LLA + +RL++ +K LR E + N
Sbjct: 738 ------QLELVHATPVEEAPTALCPFQGRLLAGVGKCLRLYDLGRKKLLRKCENKYIPNA 791
Query: 1126 IALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAE 1185
I + ++ G+ ++V D+ S L+YK E + D P W+T+ +LD E GA+
Sbjct: 792 I-VSIQAMGNRVVVSDVQESFFFLRYKRQENQLVIFADDSVPRWITASCMLDYETVAGAD 850
Query: 1186 NSYNLFICQKDSAATSDED 1204
N+ I + S+ + D D
Sbjct: 851 KFGNVSIIRLPSSISDDVD 869
Score = 41.6 bits (96), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 28/146 (19%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE +E M V E K++ I + + L G +FV + G+ L ++
Sbjct: 118 GDIFKITLETDEDM-----VTEIKLKYFDTIPVAASMCVLKTGFLFVAAEFGNHCLYQIA 172
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
R DE + S + E +L+P + + DL + Q
Sbjct: 173 RLGEEDEEPEFSSAIPLEEGDTFFFAPRALRNLLPVEELDSLSPAMGCTIADLANEDTPQ 232
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHA 211
L G LR++R+G+ HA
Sbjct: 233 LYVACGRGPRSCLRVLRHGLEASVHA 258
Score = 40.0 bits (92), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 15/114 (13%)
Query: 170 IIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGS 228
I++M + +++ QG L + G+ + E A +LPG +W + +
Sbjct: 407 IVEMGLAEMDPSSQGVL-------------YLNIGLQVSEMAVSELPGNPNAVWTVKRKA 453
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQV 282
++ D +++SFV T VL++ G VEE GF T C + ++Q
Sbjct: 454 DEDFDAYIIVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLSCAQIGDDALVQA 506
>gi|156097003|ref|XP_001614535.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803409|gb|EDL44808.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 2558
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 33/198 (16%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIK---------GACYSMCEFN 1093
T +GTA + EP G I +F +Q + EIK G + +F
Sbjct: 2215 TLICVGTANNNERITEPSSGHIYVF----VAKKQTNQFEIKHVYTYNVSCGGITHLKQFR 2270
Query: 1094 GKLLASINSTVRLFE------------WTNEKELRLECSHFNNIIALF--------LKVK 1133
K++A++N+TV + + + + K +++E + +A F L V
Sbjct: 2271 DKIVAAVNNTVVILDIGNFLANLGAYIYNSSKAIKIESNDAFLEVASFTPSSWIMSLDVV 2330
Query: 1134 GDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFIC 1193
++I+VGD+M S+TLL Y E+ RDY W TS+ L + FL ++ N +
Sbjct: 2331 ENYIVVGDIMTSVTLLSYDFENAILNEVCRDYANIWCTSVSALSENHFLVSDMESNFLVL 2390
Query: 1194 QKDSAATSDEDRTHLQEV 1211
QK + +DE+ L V
Sbjct: 2391 QKSNIKFNDEESFKLSLV 2408
Score = 43.9 bits (102), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 157 YVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP 216
++ ++ N+ PI+D VV + G+ +++TC+ + G + IIRNG+
Sbjct: 822 FIEILAVIQNMGPILDFCVVK-NKNGEKEIITCNSYGRTGCISIIRNGM----------- 869
Query: 217 GIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFY 270
+ I LS+G + N V+ +V H R + +G E GG S ++ +
Sbjct: 870 KVNIISKLSLGK---ITNMFVVKYVIHLRKSSPTGTSGVEYIPGGGPSQKRNIH 920
>gi|183233163|ref|XP_654084.2| damaged DNA binding protein [Entamoeba histolytica HM-1:IMSS]
gi|169801703|gb|EAL48698.2| damaged DNA binding protein, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449708240|gb|EMD47737.1| DNA-repair binding protein, putative [Entamoeba histolytica KU27]
Length = 995
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 1023 LFPGEYALSLISSKFGE--------DPNTYFVLGTAVVHPEENEPKQGRIIIFHYD-DGK 1073
L G + ++ I K E + N Y V GTA++ E EP GRI++ D +G
Sbjct: 684 LIDGSFGVTTIELKSNELALCVDSLEDNIYAV-GTAIIRENEIEPSSGRILLIRQDTEGL 742
Query: 1074 LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVK 1133
+ + ++ GA Y + + ++A IN V + E K+L + + +I + L +
Sbjct: 743 IYIVGTEDYDGAVYCLKKCQKGIVAFINRNVHVIE-KKGKDLNTKQNMLLPLIGVSLDIC 801
Query: 1134 GDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNL 1190
D+I+ GDL RSL++ +Y+ + + +D W + + ++ E FL A+ S N+
Sbjct: 802 KDYIIAGDLARSLSVYRYRNDIEHLDVVGKDNQIVWSSCVGSIESEYGTSFLVADVSGNI 861
Query: 1191 FICQKDSAA-TSDEDRTHLQEVGTVHL 1216
I D +D+++ +L + VH+
Sbjct: 862 KIFNSDEEEPKTDDEKINL--ISQVHV 886
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 14/251 (5%)
Query: 683 ITQRTDLN---LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFI 739
IT + LN LVV+K N +E++ + GL P+ I ++ ++ D D L +
Sbjct: 15 ITAQLTLNINYLVVSKLNLLELYEINSTGLIPLTTKRYSSGITLLLKYKPLKDITDYLIV 74
Query: 740 ITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGL 799
+TQ IL+ L I++ G++ D G+ + G+ A+I P +++ L LY L
Sbjct: 75 VTQSNEIEILKLTTSA--LHIISS--GSLKDTFGRKAFFGVKAVISPNNQILLLNLYEQL 130
Query: 800 FKIIPL---EKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNG-RHVKTHEI 855
K++ L KD +L AS+I++ I D+ F + + +H++ RH+ T+ +
Sbjct: 131 IKVVLLPQYPKD--QLTASNIKVNHSHILDMTFCLLNDSYQLALLHENKRDIRHIDTYTL 188
Query: 856 SLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKS 915
+ E K + Q N+ S ++ + + G +I E Y +G +
Sbjct: 189 N-SFNELEKGSFSQPNVGSTTSRILGFKDGIIGIFVISDEIGCYFNGNGKHILCNLNQYP 247
Query: 916 STIVCYAKVDA 926
+T C+ K D
Sbjct: 248 NTACCFIKKDV 258
>gi|149245793|ref|XP_001527373.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449767|gb|EDK44023.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1223
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 149/359 (41%), Gaps = 37/359 (10%)
Query: 135 VGSRLGDSQLVKLNRSPDENGT-------YVSVMESFTNLAPIIDM----VVVDLERQGQ 183
+G+ L D+ VKL+ D N Y + S NL+ I + + D +
Sbjct: 358 LGADLSDATSVKLSTVTDANSIDIAKKLHYKFEVRSLQNLSEIDTLESLSPITDSKLLPN 417
Query: 184 GQLVTCSGGFKEGSLRIIRNGIG---IEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSF 240
L T S K ++ + GI + E P LS SP D LV +
Sbjct: 418 SHLATLSSNHK---MKTVMAGIPTSVLVESPLTLTPTNVFTTKLSEDSPN--DEYLVFTS 472
Query: 241 VGHTRVLTLS-GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTE--SKAR 297
+ L S G +E+ F DQ T V +V+Q+ IST+ + +
Sbjct: 473 TLSSETLVFSIGESLEDVTDSKFVLDQPTIAVQQVGKASVVQIYAYGLRHISTKIGNSKK 532
Query: 298 VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISP 356
V+ W PP G SI + N QVL A + +V Y E ++ + LEY+ SP
Sbjct: 533 VTDWYPPAGISIVHAATNNKQVLIALSNSEVVYFETDPTD-----DQLLEYQEKLEVTSP 587
Query: 357 LSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEPLGGEIIPRSILMTCFE 413
+++ S P ++ A +G +D + +++SL LE + L + S+ M E
Sbjct: 588 VTSMTIS--PERSSFAIIGC-SDETIQVISLQPQSCLEVKSLQALSSK--ANSLAMLTNE 642
Query: 414 GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR-SLSTTNVFACSDR 471
Y+ + + +G +D SG+L+D + LG++P L+ + S + A S R
Sbjct: 643 RTTYVHIGMENGVYARTKIDKFSGKLSDTRVKYLGSKPIALEHVKLSEEVEGILAISSR 701
>gi|241952575|ref|XP_002419009.1| pre-mRNA-splicing factor, putative; pre-spliceosome component,
putative [Candida dubliniensis CD36]
gi|223642349|emb|CAX42591.1| pre-mRNA-splicing factor, putative [Candida dubliniensis CD36]
Length = 1187
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 145/335 (43%), Gaps = 32/335 (9%)
Query: 153 ENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+N + V+E+ L+PIID R +LVT S ++ I +G+
Sbjct: 397 DNLALIDVLET---LSPIID------SRINDSKLVTLSS---HSYVKSITHGVPTTTLVE 444
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFY 270
LP I+ + D LV+S ++ L LS G VE+ E F DQ T
Sbjct: 445 SPLPITPTDIFTTKLSLESANDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQSTIS 504
Query: 271 CGNVDPRTVLQVTPSAAILIST-ESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVY 328
V +V+QV + I T K + + W PP G +I+ S N QVL A + +V
Sbjct: 505 VQQVGIASVVQVYSNGIKHIRTVNGKKKTTDWFPPAGITITHASTNNQQVLIALSNLNVV 564
Query: 329 YLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP 388
Y E+ ++ QL E++ I+ ++ +E +SE K+ A +G +D + +++SL
Sbjct: 565 YFEIDSTD-DQLIEYQDHLEISTT-ITAMAIQEHNSE--KSSFAIIG-CSDETIQVVSLQ 619
Query: 389 SLEEVCKEPLGGEIIPRSILMTCF------EGHCYLLVALGDGSMFYFSLDPASGRLTDK 442
E+ C E + + + E H + + + +G +D +G L++
Sbjct: 620 --EDNCLEIKSLQALSANSSSLKMLKSSGKETHVH--IGMENGVYARIKIDTINGNLSNS 675
Query: 443 KKVTLGTQPTVLKTFR-SLSTTNVFACSDRPTVIY 476
+ LG++P L + S V A S P + Y
Sbjct: 676 RVKYLGSKPVNLSVIKFSNEIEGVLAISSAPWISY 710
>gi|157141630|ref|XP_001647735.1| spliceosomal protein sap [Aedes aegypti]
gi|108867854|gb|EAT32403.1| AAEL015441-PA, partial [Aedes aegypti]
Length = 645
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 1022 QLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK---QGRIIIFHYD--DGKLQQ 1076
QL E LS+ +F D Y V G V + PK G I ++ YD +L+
Sbjct: 310 QLAQNEAVLSMALVRFAVDQKWYVVAG--VAKDLQMNPKIANGGFIDVYKYDVHTHQLEH 367
Query: 1077 IAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGD 1135
EI A ++ F G++L + +R+++ +K LR E H N I + ++ G
Sbjct: 368 YHRTEIDDAPGAIAGFQGRVLVGVGRVLRIYDLGKKKLLRKCENKHIPNQI-VNIQAMGS 426
Query: 1136 FILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQK 1195
+ V D+ S+ ++YK E + D +P W+T+ +LD + A+ N+ I +
Sbjct: 427 RVFVSDVQESIYCIKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADKFGNIAILRL 486
Query: 1196 DSAATSDED 1204
+ + D D
Sbjct: 487 PHSVSDDVD 495
Score = 45.1 bits (105), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 103/261 (39%), Gaps = 35/261 (13%)
Query: 364 SEPAKAQLA---AVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-------- 412
S PA Q + AVGL D + R++SL + C P + +P + C
Sbjct: 24 SVPAGEQRSWFLAVGL-ADNTVRVISLDPSD--CLSPRSMQALPSAAESLCIVEMGTGDT 80
Query: 413 --------EGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTN 464
G YL + L +G + LDP SG L D + LG++P L + +
Sbjct: 81 NEEGVASSAGCIYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEA 140
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
V A S R + Y ++ + ++ + + ++E + + + +T ++++
Sbjct: 141 VLAMSSRTWLSYYFQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLG 200
Query: 525 KLHIR-TVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQNTTSSTI 583
+ + T PL P+R T ++ I E D + + + + +N +
Sbjct: 201 AVFNQITFPLEYTPKRFLIHNE-------TGKLVISETDHN-----AYTEETKNIRKKQM 248
Query: 584 SSLSYIKPGSTKQSTANQPAD 604
+ G +Q AN+ AD
Sbjct: 249 ADEMKEAAGEDEQELANEMAD 269
>gi|407034933|gb|EKE37449.1| DNA damage-binding protein, putative [Entamoeba nuttalli P19]
Length = 995
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 1023 LFPGEYALSLISSKFGE--------DPNTYFVLGTAVVHPEENEPKQGRIIIFHYD-DGK 1073
L G + ++ I K E + N Y V GTA++ E EP GRI++ D +G
Sbjct: 684 LIDGSFGVTTIELKSNELALCVDSLEDNIYAV-GTAIIRENEIEPSSGRILLIRQDTEGL 742
Query: 1074 LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVK 1133
+ + ++ GA Y + + ++A IN V + E K+L + + +I + L +
Sbjct: 743 IYIVGTEDYDGAVYCLKKCQKGIVAFINRNVHVIE-KKGKDLNTKQNMLLPLIGVSLDIC 801
Query: 1134 GDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNL 1190
D+I+ GDL RSL++ +Y+ + + +D W + + ++ E FL A+ S N+
Sbjct: 802 KDYIIAGDLARSLSVYRYRNDIEHLDVVGKDNQIVWSSCVGSIESEYGTSFLVADVSGNI 861
Query: 1191 FICQKDSA--ATSDEDRTHLQEV 1211
I D T DE + + +V
Sbjct: 862 KIFNSDEEEPKTDDEKISLISQV 884
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 14/251 (5%)
Query: 683 ITQRTDLN---LVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFI 739
IT + LN LVV+K N +E++ + GL P+ I ++ ++ D D L +
Sbjct: 15 ITAQLTLNINYLVVSKLNLLELYEINSTGLIPLTTKRYSSGITLLLKYKPLKDITDYLIV 74
Query: 740 ITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGL 799
+TQ IL+ L I++ G++ D G+ + G+ A+I P +++ L LY L
Sbjct: 75 VTQSNEIEILKLTTSA--LHIISS--GSLKDTFGRKAFFGVKAVISPNNQILLLNLYEQL 130
Query: 800 FKIIPL---EKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNG-RHVKTHEI 855
K++ L KD +L AS+I++ I D+ F + + +H++ RH+ T+ +
Sbjct: 131 IKVVLLPQYPKD--QLTASNIKVNHSHILDMTFCLLNDSYQLALLHENKRDIRHIDTYTL 188
Query: 856 SLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKS 915
+ E K + Q N+ S ++ + + G +I E Y +G +
Sbjct: 189 N-SFNELEKGSFSQPNVGPTTSRIVGFKDGIIGIFVISDEIGCYFNGNGKHILCNLNQYP 247
Query: 916 STIVCYAKVDA 926
+T C+ K D
Sbjct: 248 NTACCFIKKDV 258
>gi|68060004|ref|XP_671977.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56488645|emb|CAI04030.1| hypothetical protein PB301494.00.0 [Plasmodium berghei]
Length = 346
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 112/278 (40%), Gaps = 44/278 (15%)
Query: 60 WGFHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEI 119
W H ++ F + L+ G L+ + + E+ + VKE + +
Sbjct: 78 WTIHRIKTFFFI-----------LIQSEYGDLYKIEVNHEDGI-----VKEIICKYFDTV 121
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKL--------------NRSPDENGTY-------- 157
I + L +G +FV + G+ + N +N
Sbjct: 122 PIANSICVLKSGALFVAAEFGNHFFYQFSGIGNDSNESMCTSNHPSGKNAIIAFKTQKLK 181
Query: 158 -VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP 216
+ +++ +L+PI+DM ++D + Q+ G SLRI+++G+ IEE A +LP
Sbjct: 182 NLYLVDQIYSLSPIVDMKILDAKNSNIPQIYALCGRGPRSSLRILQHGLSIEELANNELP 241
Query: 217 GI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVD 275
G + IW + + D +++SF G+T +L + G VEE ++ T + +
Sbjct: 242 GKPRYIWTIKKDNSSEYDGYIIVSFEGNTLILEI-GETVEEVYDSLLLTNVTTIHINLLY 300
Query: 276 PRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVS 313
+ +QV + I + V W PP K I +
Sbjct: 301 DNSFIQVYDTG---IRHINGKIVQEWVPPKNKQIDAAT 335
>gi|384487281|gb|EIE79461.1| hypothetical protein RO3G_04166 [Rhizopus delemar RA 99-880]
Length = 1468
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 20/219 (9%)
Query: 120 SIPECLTYLDNG-VVFVGSRLGDSQLVKLNRSPDENGTYV----SVMESFTNLAPIIDMV 174
S+P C+T + G F+GSR+GDS L+K + + + + V ++ N PI+DM
Sbjct: 429 SVPSCVTNVKAGEYFFLGSRVGDSLLIKYDANRVNHQSVAPPVFRVCDTMLNTGPIVDMA 488
Query: 175 VVDL------ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSI-- 226
V D+ E Q +LV+ SG K G+L + + I + + IW++
Sbjct: 489 VGDVDTVEQQEDWPQLELVSSSGHGKNGALCVFQRHIYPQTSFAFHQFDSQAIWSIKCRK 548
Query: 227 -----GSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQ 281
+ D L +S T VL+ +G E++E + G +T D ++Q
Sbjct: 549 NDQQQNEDDDFDKLLFISKSKSTLVLS-AGDELQEVKTGFYTRGSTIAVSTLFDATRIVQ 607
Query: 282 VTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
V + ++++ E K R+ + P G I S + +L
Sbjct: 608 VYATGVMVLTPEGK-RIQTVPIPRGAKIVEASIHDPYIL 645
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 988 KQSTANQPADFNMEVEVHNLLIIDQNTFEILHA------HQLFPGEYALSLISSKFGEDP 1041
K++ P +F E+E +++++ T+EI+ Q F E AL L S +
Sbjct: 1086 KETDERGPGEFLPEMEQFSMILVSPVTWEIVDKVEFEEFEQCFSLECAL-LDSKQTSTGR 1144
Query: 1042 NTYFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMC 1090
Y ++GT + E+ K G I ++ + K + + +++KGA +MC
Sbjct: 1145 KYYMIIGTGTLKGEDTTMK-GSIRMYDIIEVVPEPDNPQTNHKFKPVLTEDVKGAVTAMC 1203
Query: 1091 EFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKG--DFILVGDLMRSLTL 1148
+G L A I S V + W+ E + RL F ++ + +FIL+GD +S+
Sbjct: 1204 TVSGHLAACIGSKVIV--WSLEDDERLVGVAFIDVQIYVTSMSSIKNFILIGDAQKSIWF 1261
Query: 1149 LQYKTMEGSFEEISRDYNPNWMTSIE-ILDDE---LFLGAEN 1186
L ++ + +DY + ++ I+DD+ L +G N
Sbjct: 1262 LGFQLEPAKLTLLGKDYQSFDVGCVDFIIDDKSLYLIVGDTN 1303
>gi|146420838|ref|XP_001486372.1| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC 6260]
Length = 1206
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA--VVHPEENEPKQGRIII 1066
I+D + +I + +L + LSL FG Y ++GTA + N PK +II
Sbjct: 849 ILDLESKKITFSTELEDNQKPLSLCRMNFGN--QKYLMVGTAKDLTFQLNNNPKY-KIIT 905
Query: 1067 FHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECS---HFN 1123
F + +L+ + E+ +M F GKLL + +RL+E ++ LR + +
Sbjct: 906 FLINGSELELLHYTEVDHPPAAMIPFEGKLLVGMGKYLRLYELGKKQLLRKSSTLVDYLT 965
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I+ + + K I+VGD S T L+Y +++ F + D +T++E LD + +G
Sbjct: 966 KIVQITHQGKQR-IVVGDGSNSTTFLKYDSLDNIFVSFADDVMKRHITALECLDHDTVIG 1024
Query: 1184 AENSYNLFI 1192
+ N+F+
Sbjct: 1025 GDKFGNVFV 1033
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 146/339 (43%), Gaps = 17/339 (5%)
Query: 198 LRIIRNGIGIEEHACIDLPGIK-GIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVE 255
L++ +GI I LP I ++ + + D +V+S ++ L L+ G VE
Sbjct: 438 LKLKTHGIPISTLVSSPLPMIATSVFTTRLSAESKNDEYMVISSSASSKTLVLAIGEVVE 497
Query: 256 ETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILI-STESKARVS----SWEPPNGKSIS 310
E + F +DQ T V ++++Q+ + I TE++ +++ W PP G +I
Sbjct: 498 EVQDSSFVTDQPTIGVQQVGLKSLIQIYSNGIRHIRQTETEGKITKKTFDWYPPAGITII 557
Query: 311 VVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRA-LEYEVACLDISPLSNEETSSEPAK 368
S N+ QVL + ++ Y E+ ++ + + ++ +E + L++ + K
Sbjct: 558 SASTNQEQVLIGLSNRELCYFEIDPTDDQLIEYQERIEMSGGQICALALASSFVNKSQRK 617
Query: 369 AQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIP---RSILMTCFEGHCYLLVALGDG 425
+ A V TD + +++SL + C E L + + S ++ E + L +G
Sbjct: 618 SPFALVA-CTDETVQVISLQ--QHNCLETLTFQALSANCTSAVIISNETSLVAHLGLENG 674
Query: 426 SMFYFSLDPASGRLTDKKKVTLGTQPTVLK--TFRSLSTTNVFACSDRPTVIYSSNHKLV 483
+L+ +G+ +D + LG L + R L V A S P + Y S +K
Sbjct: 675 LYVRSTLESITGKFSDTRVKYLGADSVKLSAISLRQLQQVGVLAVSTYPWLCYRSKNKTR 734
Query: 484 FSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDE 522
+ + + S +E + + A+ S T TI E
Sbjct: 735 ITPLMGANIKCGTSFYSEEIGEGIVGASASELTIFTIGE 773
Score = 48.9 bits (115), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 122/294 (41%), Gaps = 47/294 (15%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIF---LYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
LV+A + IE+ E + +K+I + G I + R DLL I +
Sbjct: 38 LVLATSTSIELWQFHLESGK-IKQICHQQVIGVIQNIDRIRKGGSNLDLLVITSDSGRLS 96
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
ILE D D L+ S + G +DP+ R I I +E+
Sbjct: 97 ILEF--DKDELKFFPVVQEPHSKNGMNRTTPGEYLCVDPQDRTI---------TIGAIER 145
Query: 808 DNFELKAS-------------SIRMEELEIQDVQFLHGCQNPTIICI-----HQDVNGRH 849
D KA S+ L IQ V G +NP + I H D + ++
Sbjct: 146 DKLMYKAQTNNNKLELLSPLESVSKNTLTIQMVSLDTGYENPMLAAIECNYAHYDASLKY 205
Query: 850 -VKTHEISLKEKEFTK----TPWKQDNIEMEAS--LVIPVPEPLGGAIIIGQESILYHS- 901
++ ++L+ EF + ++D +E+ +S ++P+P P+GG I+ G I YH+
Sbjct: 206 DPQSSNLTLQYYEFEQGLNYVARRKDTLEIPSSSTTLVPLPTPIGGVIVAGSSFIFYHNP 265
Query: 902 ---GKSYVAVAPQIIKSST-IVCYA--KVDANGERYLLGDLAGRLFMLLLEKEE 949
+ Y+ + + S IVCYA K+ N LL + G F +L++ ++
Sbjct: 266 TIDQQLYLPIPLRAGSSPVPIVCYAVHKLKKNNFFILLHNELGDCFRVLIDYDD 319
>gi|297816810|ref|XP_002876288.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322126|gb|EFH52547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 1001 EVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK 1060
E V + ++D T +L E A S+ + F D +L V + PK
Sbjct: 276 EKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNF-HDKEYGTLLAVGTVKGMQFWPK 334
Query: 1061 Q----GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKE 1114
+ G I I+ + ++GK L+ + + +++G ++C+F G+LLA I +RL++ ++
Sbjct: 335 KNLVAGFIHIYRFVEEGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRL 394
Query: 1115 LR-LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSI 1173
LR E F N I + ++ D I VGD+ S +Y+ E + D P W+T+
Sbjct: 395 LRKCENKLFPNTI-ISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTAS 453
Query: 1174 EILDDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
+D + GA+ N++ + +D + +ED T
Sbjct: 454 HHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPT 488
>gi|341892673|gb|EGT48608.1| CBN-CPSF-1 protein [Caenorhabditis brenneri]
Length = 1440
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 32/196 (16%)
Query: 781 IAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELE-----IQDVQFLHGCQN 835
I DPE R +Y I+P +++ + + I +++++ + D+ FL G
Sbjct: 140 IVRTDPENRCAASLVYGKHIAILPFHENSKRIHSYIIPLKQIDPRLDNVADIVFLDGYYE 199
Query: 836 PTIICIH---QDVNGRHVKTHE--------ISLKEKEFTKTPWKQDNIEMEASLVIPVPE 884
PTI+ ++ Q GR ++ +++ +++F W+ N+ M+ + ++P+P+
Sbjct: 200 PTILFLYEPLQTTPGRACVRYDTMCIMGVSVNIVDRQFAVV-WQTANLPMDCATLLPIPK 258
Query: 885 PLGGAIIIGQESILY---------------HSGKSYVAVAPQIIKSSTIVCYAKVDANGE 929
PLGGAI+ G +I+Y + G + + T+ C V
Sbjct: 259 PLGGAIVFGSNTIVYLNQAVPPCGIVLNSCYDGFTKFPLKDMKSMKMTLDCSTSVYMEDG 318
Query: 930 RYLLGDLAGRLFMLLL 945
R +G G LF+L L
Sbjct: 319 RIAVGTRDGELFLLRL 334
>gi|297820284|ref|XP_002878025.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
lyrata]
gi|297323863|gb|EFH54284.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ-- 1061
V + I+D T +L E A S+ + F D +L V + PK+
Sbjct: 100 VSCIRILDPKTATTTCLLELQDNEAAYSVCTVNF-HDKEYGTLLAVGTVKGMQFWPKKNL 158
Query: 1062 --GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR- 1116
G I I+ + ++GK L+ + + +++G ++C+F G+LLA I +RL++ ++ LR
Sbjct: 159 VAGFIHIYRFVEEGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRK 218
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
E F N I + ++ D I VGD+ S +Y+ E + D P W+T+ +
Sbjct: 219 CENKLFPNTI-ISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHV 277
Query: 1177 DDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
D + GA+ N++ + +D + +ED T
Sbjct: 278 DFDTMAGADKFGNVYFVRLPQDLSEEIEEDPT 309
>gi|389609725|dbj|BAM18474.1| spliceosomal protein sap [Papilio xuthus]
Length = 367
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Query: 1072 GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFL 1130
GKL+ + + I ++ FNGKL+A + +R+++ K LR E H N+IA +
Sbjct: 126 GKLELVHKTPIDDYPGALAAFNGKLMAGVGRMLRMYDIGRRKLLRKCENRHIPNLIA-DI 184
Query: 1131 KVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNL 1190
K G I V D+ S+ ++YK E + D NP W+T+ +LD + ++ N+
Sbjct: 185 KTIGQRIFVADVQESVFCVKYKKRENQLIIFADDTNPRWITNTCVLDYDTVAMSDKFGNV 244
Query: 1191 FICQKDSAATSDED 1204
+ + + + D D
Sbjct: 245 SVMRLPHSVSDDVD 258
>gi|83314897|ref|XP_730560.1| multisubunit cleavage/polyadenylation specificity factor subunit A
[Plasmodium yoelii yoelii 17XNL]
gi|23490318|gb|EAA22125.1| CPSF A subunit region, putative [Plasmodium yoelii yoelii]
Length = 863
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 111/258 (43%), Gaps = 52/258 (20%)
Query: 1012 QNTFEILHAHQLFPGEYALSLIS-SKFGEDP-------NTYFVLGTAVVHPEENEPKQGR 1063
QN+F+ + + P +Y +S I + +D NT +GTA ++ +EP G
Sbjct: 473 QNSFKYSY---IIPSKYNVSSICIYQINKDIYPNKSNINTLICVGTANINDRVSEPSSGH 529
Query: 1064 IIIFHYDDG----KLQQIAEKEIK-GACYSMCEFNGKLLASINSTVRLFEWTNEKELR-- 1116
I IF +++ I I G + +F KL+++IN+TV +++ N+K +
Sbjct: 530 IYIFFAKKKANLFEIKHIYTHNINVGGITHLKQFYDKLISTINNTV-IYKCVNKKLIVVI 588
Query: 1117 LECSHF-----------NNIIAL-------------------FLKVKGDFILVGDLMRSL 1146
L+ S F N I L L V ++I+VGD+M S+
Sbjct: 589 LDISDFLINLDKYVDNTNKPIKLENDGTIVDVASFTPSSWIMSLDVIENYIVVGDIMTSV 648
Query: 1147 TLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRT 1206
T+L Y + E+ RDY+ W T + L FL ++ N + QK S +DED
Sbjct: 649 TILSYDFNNSTLTEVCRDYSNVWCTFVCALSKSHFLVSDMESNFLVFQKSSIRYNDEDSF 708
Query: 1207 HLQEVGTV---HLVGDGL 1221
L V H+V L
Sbjct: 709 KLSRVALFNHGHVVNKML 726
>gi|410079495|ref|XP_003957328.1| hypothetical protein KAFR_0E00390 [Kazachstania africana CBS 2517]
gi|372463914|emb|CCF58193.1| hypothetical protein KAFR_0E00390 [Kazachstania africana CBS 2517]
Length = 1267
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 32/276 (11%)
Query: 83 LLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIP--ECLTYLDNGVVFVGSRLG 140
LL G LF L ++ +E P V +IP E L NG +F L
Sbjct: 322 LLQTNVGDLFKLKVDPDEN-----DRNRPTVSFTYFDTIPRSEQLHIFKNGYLFANCELH 376
Query: 141 DSQLVKLNRSPDENGTYVS-VMESFT-NLAPIIDMVVVDLERQ------------GQGQL 186
D+ L++ + G+ + + ESF+ NL + ++ + D ++ L
Sbjct: 377 DNYLLQF----ESLGSDIQEINESFSPNLQSLENLAISDTQKNLNPLLPNTINLNQSTPL 432
Query: 187 VTCSGGFKEGSLRIIRNGIGIEEHACIDLP-GIKGIWALSIGSPKNLDNTLVLSFVGHTR 245
V + S+R N I E+ DLP + +W L + S LVLSF T
Sbjct: 433 VLTQKYANDDSIRHFSNSIDFEDFTSSDLPLNPQNLWTLKLNSSA-FHELLVLSFQNSTM 491
Query: 246 VLTLSGAEVEETEMGG----FTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSW 301
+L + +E+ + + +T + ++ ++QV + + +ST +VSSW
Sbjct: 492 LLKVENDSIEDMKFPDSVPFILKNDKTIHVTILNNIYIIQVCHNQLVQVSTSDFKQVSSW 551
Query: 302 EPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSE 336
PP G I S Q++ A + V Y E+ G +
Sbjct: 552 FPPAGIHIIAASSTHKQLVVALSNNQVIYFEMPGED 587
>gi|125526594|gb|EAY74708.1| hypothetical protein OsI_02601 [Oryza sativa Indica Group]
Length = 314
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 1074 LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVK 1133
LQ + + + G ++ F +LASI +++ + + C N + +L +
Sbjct: 81 LQPMLDAPVYGRIATIELFRPCVLASI-------KFSPDSRAKSSCKFVNAFV--YLNQE 131
Query: 1134 GDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFIC 1193
+++ + + T +G +E+SRDYN WMT++E+LDD +++GA+N YNLF
Sbjct: 132 NRYVICRSGRDASDHIGRPTNKGQTDELSRDYNITWMTAVEMLDDYVYIGADNCYNLFTV 191
Query: 1194 QK 1195
K
Sbjct: 192 LK 193
>gi|124505011|ref|XP_001351247.1| CPSF (cleavage and polyadenylation specific factor), subunit A,
putative [Plasmodium falciparum 3D7]
gi|7768292|emb|CAB11136.2| CPSF (cleavage and polyadenylation specific factor), subunit A,
putative [Plasmodium falciparum 3D7]
Length = 2870
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 99/233 (42%), Gaps = 54/233 (23%)
Query: 1023 LFPGEYALS---------LISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGK 1073
+ P +Y +S L+ S F D ++ +GT + + EP G I IF
Sbjct: 2500 IIPSKYTVSTIIIYDNEKLMKSNF--DVTSFIFVGTCNSNEKYTEPTSGHIHIF------ 2551
Query: 1074 LQQIAEK-----EIK---------GACYSMCEFNGKLLASINSTVRLFEWTN-------- 1111
IA+K EIK G ++ ++ K++A+IN+ V + + N
Sbjct: 2552 ---IAKKKANIFEIKHIYTHNINYGGVTNLVPYDDKIVATINNMVVILDINNLIIKYEAF 2608
Query: 1112 --EKELRLECSHFNNIIALF----------LKVKGDFILVGDLMRSLTLLQYKTMEGSFE 1159
+ L+ + N I+ L + V GD+I+VGD+M S+T+LQY
Sbjct: 2609 MDPQNLQPKIEGNNAIVELVSFTPSSWIMTVDVYGDYIVVGDIMTSVTILQYDYENSQLF 2668
Query: 1160 EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVG 1212
E+ RDY+ W TS+ L + ++ N I QK +DED L V
Sbjct: 2669 EVCRDYSNIWCTSLCALSKSHIVVSDMDANFIILQKSKFKYNDEDSYKLSSVS 2721
>gi|190345965|gb|EDK37945.2| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC 6260]
Length = 1206
Score = 59.7 bits (143), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTA--VVHPEENEPKQGRIII 1066
I+D + +I + +L + LSL FG Y ++GTA + N PK +II
Sbjct: 849 ILDLESKKITFSTELEDNQKPLSLCRMNFGN--QKYLMVGTAKDLTFQLNNNPKY-KIIT 905
Query: 1067 FHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECS---HFN 1123
F + +L+ + E+ +M F GKLL + +RL+E ++ LR + +
Sbjct: 906 FLINGSELELLHYTEVDHPPAAMIPFEGKLLVGMGKYLRLYELGKKQLLRKSSTLVDYLT 965
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I+ + + K I+VGD S T L+Y + + F + D +T++E LD + +G
Sbjct: 966 KIVQITHQGKQR-IVVGDGSNSTTFLKYDSSDNIFVSFADDVMKRHITALECLDHDTVIG 1024
Query: 1184 AENSYNLFI 1192
+ N+F+
Sbjct: 1025 GDKFGNVFV 1033
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 166/393 (42%), Gaps = 31/393 (7%)
Query: 198 LRIIRNGIGIEEHACIDLPGIK-GIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVE 255
L++ +GI I LP I ++ + + D +V+S ++ L L+ G VE
Sbjct: 438 LKLKTHGIPISTLVSSPLPMIATSVFTTRLSAESKNDEYMVISSSASSKTLVLAIGEVVE 497
Query: 256 ETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILI-STESKARVS----SWEPPNGKSIS 310
E + F +DQ T V ++++Q+ + I TE++ +++ W PP G +I
Sbjct: 498 EVQDSSFVTDQPTIGVQQVGLKSLIQIYSNGIRHIRQTETEGKITKKTFDWYPPAGITII 557
Query: 311 VVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRA-LEYEVACLDISPLSNEETSSEPAK 368
S N+ QVL + ++ Y E+ ++ + + ++ +E + L++ + K
Sbjct: 558 SASTNQEQVLIGLSNRELCYFEIDPTDDQLIEYQERIEMSGGQICALALASSFVNKSQRK 617
Query: 369 AQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVA---LGDG 425
+ A V TD + +++SL + C E L + + + + LVA L +G
Sbjct: 618 SPFALVAC-TDETVQVISLQ--QHNCLETLTFQALSANCTSAVIISNETSLVAHLGLENG 674
Query: 426 SMFYFSLDPASGRLTDKKKVTLGTQPTVLK--TFRSLSTTNVFACSDRPTVIYSSNHKLV 483
+L+ +G+ +D + LG L + R V A S P + Y S +K
Sbjct: 675 LYVRSTLESITGKFSDTRVKYLGADSVKLSAISLRQSQQVGVLAVSTYPWLCYRSKNKTR 734
Query: 484 FSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ---------KLHIRTVPLG 534
+ + + S +E + + A+ S T TI E + +L I + L
Sbjct: 735 ITPLMGANIKCGTSFYSEEIGEGIVGASASELTIFTIGEDEDNSEMSIEDELAIEDIRLR 794
Query: 535 EAPRRIAYQESS-----QTFGVITTRIDIQEAD 562
+P ++ ++ + +GV++ +E D
Sbjct: 795 YSPTKMILEDQTAFVIESEYGVVSPYQSGEEVD 827
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 124/285 (43%), Gaps = 29/285 (10%)
Query: 691 LVVAKNNRIEIHTVTPEGLRPVKEIF---LYGKIAVMKFFRGPTDKKDLLFIITQRYNAM 747
LV+A + IE+ E + +K+I + G I + R DLL I +
Sbjct: 38 LVLATSTSIELWQFHSESGK-IKQICHQQVIGVIQNIDRIRKGGSNLDLLVITSDSGRLS 96
Query: 748 ILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
ILE D D L+ S + G +DP+ R I + + +
Sbjct: 97 ILEF--DKDELKFFPVVQEPHSKNGMNRTTPGEYLCVDPQDRTITIGAIERDKLMYKAQT 154
Query: 808 DNFELKASS----IRMEELEIQDVQFLHGCQNPTIICI-----HQDVNGRH-VKTHEISL 857
+N +L+ SS + L IQ V G +NP + I H D + ++ ++ ++L
Sbjct: 155 NNNKLELSSPLESVSKNTLTIQMVSLDTGYENPMLAAIECNYAHYDASLKYDPQSSNLTL 214
Query: 858 KEKEFTK----TPWKQDNIEMEAS--LVIPVPEPLGGAIIIGQESILYHS----GKSYVA 907
+ EF + ++D +E+ +S ++P+P P+GG I+ G I YH+ + Y+
Sbjct: 215 QYYEFEQGLNYVARRKDTLEIPSSSTTLVPLPTPIGGVIVAGSSFIFYHNPTIDQQLYLP 274
Query: 908 VAPQIIKSST-IVCYA--KVDANGERYLLGDLAGRLFMLLLEKEE 949
+ + S IVCYA K+ N LL + G F +L++ ++
Sbjct: 275 IPSRAGSSPVPIVCYAVHKLKKNNFFILLHNELGDCFRVLIDYDD 319
>gi|389614684|dbj|BAM20371.1| spliceosomal protein sap, partial [Papilio polytes]
Length = 541
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Query: 1072 GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFL 1130
GKL+ + + I ++ FNG+L+A + +R+++ K LR E H N+IA +
Sbjct: 259 GKLELVHKTPIDDYPGALAAFNGRLMAGVGRMLRMYDIGRRKLLRKCENRHIPNLIA-DI 317
Query: 1131 KVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNL 1190
K G I V D+ S+ ++YK E + D NP W+T+ +LD + ++ N+
Sbjct: 318 KTIGQRIFVADVQESVFCVKYKKRENQLIIFADDTNPRWITNTCVLDYDTVAMSDKFGNV 377
Query: 1191 FICQKDSAATSDED 1204
+ + + + D D
Sbjct: 378 AVMRLPHSVSDDVD 391
>gi|167395195|ref|XP_001741266.1| pre-mRNA-splicing factor rse-1 [Entamoeba dispar SAW760]
gi|165894222|gb|EDR22283.1| pre-mRNA-splicing factor rse-1, putative [Entamoeba dispar SAW760]
Length = 1145
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 95/487 (19%), Positives = 181/487 (37%), Gaps = 51/487 (10%)
Query: 83 LLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDS 142
LL G LF LL + +EK + + I I L + G + GDS
Sbjct: 298 LLQSEFGDLFQLLFDTKEKGQ----LDNIHIRYFDSIPIALSLQFSKRGHLLCIGEYGDS 353
Query: 143 QLVKL------NRSPDENGTY----------VSVMESFTNLAPIIDMVVV-DLERQGQGQ 185
L + N ++NG + F +LAP+ID+ V Q +
Sbjct: 354 ILYNIISMENINVPLEKNGRLEFERHEEILNLEEFYRFKSLAPLIDLKVAPATSSQDTTK 413
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK-GIWALSIGSPKNLDNTLVLSFVGHT 244
+ G + +++I++N + + I+LP I +W L L +S+ T
Sbjct: 414 MYAFCGKGNQSTIKILKNQLNTLDAVEIELPAIPISVWPLK-KETDEYHQYLAISYSNIT 472
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPP 304
+L ++ E+ E + + T LQV I+ S + ++
Sbjct: 473 TLLKITEDEMSECNTTPILLSTPSLLVSMLSDGTFLQVMTDRIIVYSEPIQQFITE---- 528
Query: 305 NGKSISVVSCNKNQVLCATGCD----VYYLEVHGSEIKQLAHRALEYEVACLDISPLSNE 360
N K + SCN ++++ + + + Y + + + + ++ L +
Sbjct: 529 NQKYV-CASCNGSELIVSVEKNNQTALIYFQYQSGHLLTMERKENLAKITALALDQFH-- 585
Query: 361 ETSSEPAKAQLAAVGLWTDISARLLSL------PSLEEVCKEPLGGEIIPRSILMTCFEG 414
+Q A+G D S LLSL +L V + + S+ +
Sbjct: 586 -------PSQHCAIGC-VDGSVHLLSLIPNETTKALSRVSLQTYDCSV--NSLTFNIIDN 635
Query: 415 HCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTV 474
YL L +G + + DP SG + + +G++P L + +V A S R +
Sbjct: 636 KSYLFAGLSNGLLGRSTYDPISGEINESSLNFVGSRPVTLSNVKDCGEDSVLAISGRSLL 695
Query: 475 IYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPL 533
Y + K+ + +N++ C + +++A+ + TI+ L + + L
Sbjct: 696 SYKNGTKIKTTPLNIQNTTLACGILVPFVDNAIAIICEKVMKIITIESTSSSLTGKNIQL 755
Query: 534 GEAPRRI 540
PR+I
Sbjct: 756 SYTPRKI 762
>gi|71663721|ref|XP_818850.1| damage-specific DNA binding protein [Trypanosoma cruzi strain CL
Brener]
gi|70884123|gb|EAN96999.1| damage-specific DNA binding protein, putative [Trypanosoma cruzi]
Length = 774
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 31/185 (16%)
Query: 1040 DPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGK-------LQQIAEKEIKGACYSMC-- 1090
D + +LGT P+E P+ R I + + GK L+QI K+++GA C
Sbjct: 350 DKDKAILLGTTFAFPDEQLPRSSRFIWYSVEQGKLISERPQLRQIGSKDVEGALQCCCIV 409
Query: 1091 -EFNGKLLASINSTVRLFEWTNEKELRL--ECSHFNNIIALFLKV-KGD--FILVGDLMR 1144
+ G++ IN + L+ W + + E I+ L + +GD +++ D
Sbjct: 410 PNYVGRIALGINGCIALYSWNAADSVFVAEETICIGTIVTRVLPIFQGDASYMVAFDARH 469
Query: 1145 SLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF-LGAENSYNL--------FICQK 1195
S +Q T +GS E ++RD P ++D +F LG N YN+ F C
Sbjct: 470 SCFFIQVDTFQGSLEIVARDSEPR-----GVMDGTVFQLG--NIYNICFGDDYYNFFCLS 522
Query: 1196 DSAAT 1200
A+T
Sbjct: 523 RGAST 527
>gi|407416557|gb|EKF37684.1| damage-specific DNA binding protein, putative [Trypanosoma cruzi
marinkellei]
Length = 1276
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 29/184 (15%)
Query: 1040 DPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGK-------LQQIAEKEIKGACYSMC-- 1090
D + +LGT P+E P+ R I + + GK L+QI K+++GA C
Sbjct: 852 DKDKAILLGTTFAFPDEQLPRSSRFIWYSVEQGKLLSERPQLRQIGSKDVEGALQCCCIV 911
Query: 1091 -EFNGKLLASINSTVRLFEWTNEKELRL--ECSHFNNIIALFLKV-KGD--FILVGDLMR 1144
+ G++ IN + L+ W + + E I+ L + +GD +++ D
Sbjct: 912 PNYVGRIALGINGCIALYSWNAADSVFVAEETICIGTIVTRVLPIFQGDASYMVAFDARH 971
Query: 1145 SLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF-LG-------AENSYNLFICQKD 1196
S +Q T++GS E ++RD P ++D +F LG ++ YN F C
Sbjct: 972 SCFFIQVDTIQGSLEIVARDSEPR-----GVMDGAVFQLGNIYDICFGDDYYNFF-CLSR 1025
Query: 1197 SAAT 1200
A T
Sbjct: 1026 GATT 1029
>gi|84999522|ref|XP_954482.1| damage-specific DNA binding protein 1 [Theileria annulata]
gi|65305480|emb|CAI73805.1| damage-specific DNA binding protein 1, putative [Theileria annulata]
Length = 1501
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 174/404 (43%), Gaps = 41/404 (10%)
Query: 252 AEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS----TESKARVSSWE--PPN 305
++ + E F +++T ++ +LQVTP + ++ T + ++S +
Sbjct: 650 GKITKFENNVFLCNEKTILLSHLRNGNILQVTPRNIVFVNDSFKTVKRTKISQIVRLADD 709
Query: 306 GKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVA---CLDISPLSNEET 362
++S V CN +L + + LE ++K ++ R LE+ V+ C+ + L N +
Sbjct: 710 KLAVSSVVCNPYIILLLSNNCIVALEF---DLKLVSSRNLEFNVSAMGCITKNDLLNSDL 766
Query: 363 SSEPAKAQLAAVGLWTDISARL-LSLPSLEEVC--KEPLGGEIIPRSILMTCFEGHCYLL 419
L AV W + L L++ L+ VC K L +I SI + YLL
Sbjct: 767 GIFAGAGGLLAVSSWDSNNVILFLTVKDLKVVCSHKISLDYDIFAVSIKFAKINTNVYLL 826
Query: 420 VALGDGSMFYFSLDPASG----RLTDKKKVTLGTQPTV-LKTFR-------SLSTTNVFA 467
++L +G ++ + L L +K K++L + + LK +LS ++
Sbjct: 827 LSLSNGVLYIYQLTKIDRTIKFTLVNKSKLSLWSFKLLELKVNNDEDEDTCNLSKVHLIT 886
Query: 468 CSDRPTVIYSSNHKLVFSNVNLRQVNHMCSL-------NAESYPDSLALATDSTFTFGTI 520
+ VI+ N K+ ++ +N ++ M ++ N E + + G +
Sbjct: 887 TGPKSYVIHPKNGKINYTKINTDNLHTMTTIANLKSVENTEKQEMLVIYNNHKSVVVGKL 946
Query: 521 DEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITT----RIDIQEADGSTPVRPSASTQAQ 576
+ + +++ + G ++ Y ++ VI+T I+ +TP+ + +
Sbjct: 947 NLLNNFNVQKILKGSNFNKVVYHSKTK-LAVISTIPQYIINPSNLTTNTPINSQNTDVLE 1005
Query: 577 NTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQN 620
+ +S ++ S + P +++QS N DFN ++ + + L+I N
Sbjct: 1006 SGYTSATNTQSQLSPCASQQS--NNSTDFNSQLSLPDSLLICMN 1047
Score = 56.6 bits (135), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 106 FSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVME--- 162
F V E LG +P L LD +F S++GDS ++ +N + + Y E
Sbjct: 423 FMVSEVMAVKLGNFPVPSSLIKLDEEHIFYTSKMGDSSILSINSILNSSNRYEQNSEQSD 482
Query: 163 ------SFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP 216
+ TNL PI D + G+ ++ C G GS I G+ E D+P
Sbjct: 483 RNSTEWAQTNLGPITDFAYREETSSGETTILACCGMGNSGSFCEIYLGLSSEIIHESDVP 542
Query: 217 GIKGIWALSIGSPKNLDNTLV-LSFVGHTRVLTLSGAEVEETE 258
G+ ++++ + S N ++L+ +SF T+ S + VE +E
Sbjct: 543 GVLNLFSVPMKSLYNSTSSLLCISFFRFTKFYNFSLSSVEPSE 585
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 1097 LASINSTVRLFEWTNEKE--LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTM 1154
L IN + L +E L + S+ +N + L K D I VGDLM S+ +L+++
Sbjct: 1204 LVDINDSSTLIPKIDENTPFLDVVASYDSNTFVVSLDTKDDVIFVGDLMTSVKMLKFR-- 1261
Query: 1155 EGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTV 1214
+ S E RD+N W TS+ +D+ L +++S N + +K +D+ ++G
Sbjct: 1262 DNSLHETCRDFNTLWTTSLVAVDNSSCLVSDDSGNFMLLKKVKHPVTDQQSIKFDKIGLF 1321
Query: 1215 H 1215
H
Sbjct: 1322 H 1322
>gi|198415711|ref|XP_002123169.1| PREDICTED: similar to cleavage and polyadenylation specificity factor
1, partial [Ciona intestinalis]
Length = 1370
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 17/188 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
+ VLGT V EE + G+III KL+QI +E KG ++C
Sbjct: 1107 FLVLGTVNVFGEEMSSR-GKIIILEVIEVVPEPGQPLTKNKLKQIYSEEQKGPVTAVCGL 1165
Query: 1093 NGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY 1151
G LL +I + ++ + + LR L N I L + F LVGD+ RS+TLL+Y
Sbjct: 1166 EGNLLTAIGQKIFIWRFDENQSLRGLAFVDTNVYIHHALSFRS-FALVGDIQRSITLLRY 1224
Query: 1152 KTMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFICQKDSAATSDEDRTHL 1208
+T + SRD P + + +++ D FL +++ NL + D + L
Sbjct: 1225 QTDFKTLSVTSRDVRPLEVYTADLVVDGTGINFLVSDHEKNLVLFAYDPEDHESHGGSRL 1284
Query: 1209 QEVGTVHL 1216
+ +H+
Sbjct: 1285 TKRADMHI 1292
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 97/249 (38%), Gaps = 45/249 (18%)
Query: 692 VVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILEC 751
V K E +TV E L+ + L+G + M+ R K D + + I+E
Sbjct: 49 VTTKTENGEENTVVKEKLQQIGSWQLFGNVVRMRSVRLAGAKLDSVLLSFAEAKLSIIEF 108
Query: 752 RGDIDNLEILTKAHGNVSDRIGKPSENGIIAI----IDPEARVIGLRLYNGLFKIIPLE- 806
D +I T + D + K I + +DPE+R + L+L ++PL
Sbjct: 109 --DQATHDIKTTSLHYFEDALYKDGSYQRITLPKIAVDPESRCVALQLTTKSVAVVPLRA 166
Query: 807 -------------KDN-------------FELKASSIRMEELEIQDVQFLHGCQNPTIIC 840
+DN +L A R++ I D+QFLHG PT++
Sbjct: 167 NTAALATDDGAAPQDNVSLQNKRSTTSYTIDLHAVDARLQR--IIDIQFLHGYNEPTLLV 224
Query: 841 IHQDVN---GRHVKTHE------ISLKEKE-FTKTPWKQDNIEMEASLVIPVPEPLGGAI 890
+ + + GR + ISL E W + + + PVP+P+GG +
Sbjct: 225 LFESLRTWAGRVAMRQDTCNIVAISLNMAEQLHPVVWSLNGLPFDCKYAYPVPKPIGGVL 284
Query: 891 IIGQESILY 899
I SILY
Sbjct: 285 IFAVNSILY 293
Score = 44.3 bits (103), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWA---------LSIGSP 229
+R+ +L SG K G++ +++ + + +LPG +W L +
Sbjct: 488 QRESDLELAILSGHGKNGAISVLQRSVKPQVVTTFELPGCIDMWTVKSVCEKTELPTKTQ 547
Query: 230 KNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV--DPRTVLQVTPSAA 287
+ + L+LS T +L +G E+ E E GF + +Q+ + GN+ D +LQV S
Sbjct: 548 QQQHSYLILSREESTLILE-TGKEIMEVENSGFNTREQSVFVGNIGGDKELILQVCASGV 606
Query: 288 ILIS 291
L++
Sbjct: 607 WLLA 610
>gi|300176207|emb|CBK23518.2| unnamed protein product [Blastocystis hominis]
Length = 236
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 45/190 (23%)
Query: 687 TDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNA 746
+ L++++AK +++E+++V+ GL P+ ++ LYG+I K +
Sbjct: 28 SSLDVIIAKGSKLELYSVSESGLTPIYDVSLYGRIVERKTY------------------- 68
Query: 747 MILECRGDIDNLEILTKAHGNVSDRIGKP-------------SENGIIAIIDPEARVIGL 793
D EI T GN+ ++IG+P S+ I +DP R+ L
Sbjct: 69 ------CDASTREIPTVVRGNIQNKIGRPVDISFRSHFRFLYSQRAPICRVDPTNRICLL 122
Query: 794 RLYNGLFKIIPLEKD-NFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNG-RHVK 851
LY IPL + N A I + EL I+D+QF+ I G R V+
Sbjct: 123 SLY-----FIPLTNELNVAFHAFDIHINELGIRDLQFIPSNDRSIRFAILYKFRGRRQVR 177
Query: 852 THEISLKEKE 861
+ + + ++
Sbjct: 178 VYSLDVPNRQ 187
Score = 41.6 bits (96), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 34/46 (73%)
Query: 625 NFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFF 670
+F SS+ L++++AK +++E+++V+ GL P+ ++ LYG+I K +
Sbjct: 23 HFLSSSSLDVIIAKGSKLELYSVSESGLTPIYDVSLYGRIVERKTY 68
>gi|237839083|ref|XP_002368839.1| hypothetical protein TGME49_067710 [Toxoplasma gondii ME49]
gi|211966503|gb|EEB01699.1| hypothetical protein TGME49_067710 [Toxoplasma gondii ME49]
Length = 2136
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 62/225 (27%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHY---DDGKLQ-QIAEK--EIKGACYSMCEFNGKL 1096
+ +GTA V ++EPK+G II+ DG+L Q+A E++ + F G L
Sbjct: 1671 SLLCVGTAEVMASDSEPKEGLIILLDVRRGTDGRLVVQLAAHIHELRSGVQQLRPFQGLL 1730
Query: 1097 LASINSTVRLF---------------------------------------------EWTN 1111
LA+ N VRLF + T
Sbjct: 1731 LAACNHRVRLFGLRRELEGAAGLEAEMEGDSPQASEVHAGDRGRSSAGRRQGARARDRTE 1790
Query: 1112 EK----------ELRLECSHFNNIIALFLKVKGD-FILVGDLMRSLTLLQYKTMEGSFEE 1160
EK L L CSH +N + D + +GD++ S LL++ + +F+E
Sbjct: 1791 EKGRELCEMLKARLELVCSHSSNAFVSSMDTWHDEIVCLGDMVASAVLLRFSPKDNAFKE 1850
Query: 1161 ISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDR 1205
I+RD N W ++ L L A+ N+++ ++ S S+ R
Sbjct: 1851 IARDTNACWTLAVSCLSPNLHYLADADRNIWLLERASLLGSEGRR 1895
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 24/90 (26%)
Query: 82 YLLGDLAGRLFMLLL----------EKEEKMDGTFSVKEPK--------------VELLG 117
+LLGD++G+++ML+L E E+++ G S + P+ VE LG
Sbjct: 541 FLLGDVSGQIYMLMLFENSRPRPQMEIEQRLTGASSRESPRPSGEEASGRAARMCVEWLG 600
Query: 118 EISIPECLTYLDNGVVFVGSRLGDSQLVKL 147
+ S P L+YL NG++FV S DS L+++
Sbjct: 601 QASEPTGLSYLGNGILFVASATSDSLLLRI 630
>gi|25148482|ref|NP_500157.2| Protein CPSF-1 [Caenorhabditis elegans]
gi|22096347|sp|Q9N4C2.2|CPSF1_CAEEL RecName: Full=Probable cleavage and polyadenylation specificity
factor subunit 1; AltName: Full=Cleavage and
polyadenylation specificity factor 160 kDa subunit;
Short=CPSF 160 kDa subunit
gi|373220398|emb|CCD73182.1| Protein CPSF-1 [Caenorhabditis elegans]
Length = 1454
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 785 DPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELE-----IQDVQFLHGCQNPTII 839
DP R +Y I+P +++ + + I +++++ I D+ FL G PTI+
Sbjct: 145 DPSNRCAACLVYGKHIAILPFHENSKRIHSYVIPLKQIDPRLDNIADMVFLDGYYEPTIL 204
Query: 840 CIHQDVN---GRHVKTHE--------ISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGG 888
+++ + GR ++ +++ +++F W+ N+ M+ S ++P+P+PLGG
Sbjct: 205 FLYEPIQTTPGRACVRYDTMCIMGVSVNIVDRQFAVV-WQTANLPMDCSQLLPIPKPLGG 263
Query: 889 AIIIGQESILY 899
A++ G +++Y
Sbjct: 264 ALVFGSNTVVY 274
>gi|196012166|ref|XP_002115946.1| hypothetical protein TRIADDRAFT_59883 [Trichoplax adhaerens]
gi|190581722|gb|EDV21798.1| hypothetical protein TRIADDRAFT_59883 [Trichoplax adhaerens]
Length = 1187
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 178 LERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALS----------IG 227
++ + ++V CSG K G+L ++ GI + A DLPG +W +
Sbjct: 402 VQEESDVEVVICSGHDKNGALSVLNKGIKPQVVASYDLPGCVDMWTVKDIRLNDENDGDF 461
Query: 228 SPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDP-RTVLQVTPSA 286
+N L++S T +L +G E+ E E GF + +T + GN+D ++QVTP
Sbjct: 462 ETENTHKFLIISRDNLTMILR-TGKEITEVEQLGFLTQTKTVFAGNLDNGNCIIQVTPYE 520
Query: 287 AILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRAL- 345
IL+S K + E N I V C+ L + G I LA
Sbjct: 521 VILVSKGEK--IQQLELENESPI---------VFCSLQDPYISLLLEGGSIMMLAFELSD 569
Query: 346 --EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARL 384
E +V ++ +PL++ +++AA L+ D + R+
Sbjct: 570 NGEKQVKLVNTTPLNH---------SRIAACCLFQDNNGRM 601
>gi|326511015|dbj|BAJ91855.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 706
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ-- 1061
V + I+D + + +L E A+S+ + F D +L + PK+
Sbjct: 352 VSCIRILDPRSRDTTCLLELQDNEAAVSICTVNF-HDKEHGTLLAVGTTKGLQFWPKRSL 410
Query: 1062 --GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR- 1116
G I I+ + ++GK L+ + + +++ S+C+F G+LLA + S +RL++ K LR
Sbjct: 411 ASGFIHIYKFVNEGKSLELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLYDLGKRKLLRK 470
Query: 1117 LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
E F I + + D I VGD+ S +Y+ E + D P W+T+ +
Sbjct: 471 CENKLFPRTI-VSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHI 529
Query: 1177 DDELFLGAENSYNLFICQ--KDSAATSDEDRT 1206
D + GA+ N++ + +D + +ED T
Sbjct: 530 DFDTMAGADKFGNIYFARLPQDLSDEIEEDPT 561
>gi|11359310|pir||T51288 silencing protein rik1 - fission yeast (Schizosaccharomyces pombe)
gi|4580723|gb|AAD24488.1|AF136156_1 silencing protein Rik1 [Schizosaccharomyces pombe]
Length = 916
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 171/422 (40%), Gaps = 55/422 (13%)
Query: 125 LTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQG 184
L + G++F+GS+ +S+L+ L+ D ++S NL PI D++V L+ +
Sbjct: 184 LNSIHEGLLFIGSKNSESKLINLSTLKD--------VDSIPNLGPIHDLLV--LKNDIEK 233
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHT 244
+ C+G + SL ++ + ++ + GI L P ++ L L F T
Sbjct: 234 SFLVCAGTPRNASLIYFQHALKLDILGQTKISGILRAMVL----PSYPEHKLFLGFPSET 289
Query: 245 RVLTLSGAEVEETEMG-GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEP 303
+ E + E+ ++ ++T + V QVT + + + ++R+ E
Sbjct: 290 VAFNIK--EDFQLELDPSLSTKERTIALSGTNGENV-QVTSTFLCIYDSAKRSRLVYIE- 345
Query: 304 PNGKSISVVSCNKNQ---VLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNE 360
I+ +C + V+ T ++ + ++A + E E++CLD S
Sbjct: 346 ----KITNAACYQEYSAIVINGTALAIF------KKDTEVARKVFESEISCLDFS----- 390
Query: 361 ETSSEPAKAQLAAVGLWTDISARLLSLPSLEEV-CKEPLGGEIIPRSILMTCFEG----H 415
A+ Q+ VG W+ +L+ + C +PR+I++ EG
Sbjct: 391 ------AQFQIG-VGFWSK-QVMILTFSDNSSISCAFQTNVPSLPRNIIL---EGVGVDR 439
Query: 416 CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVI 475
LLV+ G G + L + ++ K GT P + F T + +D P ++
Sbjct: 440 NLLLVSSGSGEFKSYVLFKNNLVFSETKH--FGTTPVSFRRFTMNIGTYIICNNDCPHMV 497
Query: 476 YSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGE 535
Y N L + +++ Q +C S D L + F ++ + +L R V L
Sbjct: 498 YGFNGALCYMPLSMPQSYDVCQFRDNSGKDFLISVSLGGLKFLQLNPLPELTPRKVLLEH 557
Query: 536 AP 537
P
Sbjct: 558 VP 559
>gi|324499955|gb|ADY39993.1| Cleavage and polyadenylation specificity factor subunit 1 [Ascaris
suum]
Length = 1434
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 15/131 (11%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN-----FELKASSIRMEELEIQDVQFLHGCQNPTI 838
+DP R + +Y ++P + + + + SSI + I D+ FL G PT+
Sbjct: 185 VDPAQRCAVMLIYGRYLAVLPFDDTSPHLHTYTVALSSIDPRLVNIIDIAFLDGYYEPTL 244
Query: 839 ICIH---QDVNGRHVKTHE------ISLKEKE-FTKTPWKQDNIEMEASLVIPVPEPLGG 888
+ ++ Q GR ++ +SL KE + W+ +N+ M+ + V+ +P P+GG
Sbjct: 245 LFLYEPAQTTAGRACVRYDTVCMLGVSLNTKEQVHASVWQLNNLPMDCNQVLMIPRPIGG 304
Query: 889 AIIIGQESILY 899
A+IIG ++Y
Sbjct: 305 ALIIGANELIY 315
>gi|71407487|ref|XP_806209.1| damage-specific DNA binding protein [Trypanosoma cruzi strain CL
Brener]
gi|70869885|gb|EAN84358.1| damage-specific DNA binding protein, putative [Trypanosoma cruzi]
Length = 508
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 31/185 (16%)
Query: 1040 DPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGK-------LQQIAEKEIKGACYSMC-- 1090
D + + GT P+E P+ R I + + GK L+QI K+++GA C
Sbjct: 84 DKDKAILFGTTFAFPDEQLPRSSRFIWYCVEQGKLISERPQLRQIGSKDVEGALQCCCIV 143
Query: 1091 -EFNGKLLASINSTVRLFEWTNEKELRL--ECSHFNNIIALFLKV-KGD--FILVGDLMR 1144
+ G++ IN + L+ W + + E I+ L + +GD +++ D
Sbjct: 144 PNYVGRIALGINGCIALYSWNAADSVFVAEETICIGTIVTRVLPIFQGDASYMVAFDARH 203
Query: 1145 SLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF-LGAENSYNL--------FICQK 1195
S +Q T++GS E ++RD P ++D +F LG N YN+ F C
Sbjct: 204 SCFFIQVDTIQGSLEIVARDSEPR-----GVMDGAVFQLG--NIYNICFGDDYYNFFCLS 256
Query: 1196 DSAAT 1200
A+T
Sbjct: 257 RGAST 261
>gi|161899297|ref|XP_001712875.1| splicing factor 3b [Bigelowiella natans]
gi|75756369|gb|ABA27263.1| splicing factor 3b [Bigelowiella natans]
Length = 1158
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 15/180 (8%)
Query: 153 ENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQ--LVTCSGGFKEGSLRIIRNGIGIEEH 210
N + +S++ LA I + + E Q +T + GF L + GIG+ E
Sbjct: 387 RNLSTLSIINQIEILANISSLTINKFETNSVSQEIYLTSNAGF-NSFLHFLEYGIGVLEI 445
Query: 211 ACIDLPGIK-GIWALSIGSPKNLDNT--LVLSFVGHT-----RVLTLSGAEVEETEMGGF 262
A LP GIW SI + +DN +V+SF HT R + + EE+ G
Sbjct: 446 ATAKLPTEPIGIW--SINTYDGIDNKFLIVISFETHTYSAFFRFNEKNSSIFEESHKTGL 503
Query: 263 TSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA 322
+T YC ++ +++QV IS K +S W+ P G IS+ + N +Q+
Sbjct: 504 QESVKTIYCSILNETSIIQVFKEGIFWIS--KKNMISRWDIPKGSEISIATSNFSQLFVV 561
>gi|238590334|ref|XP_002392284.1| hypothetical protein MPER_08162 [Moniliophthora perniciosa FA553]
gi|215458122|gb|EEB93214.1| hypothetical protein MPER_08162 [Moniliophthora perniciosa FA553]
Length = 276
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 417 YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIY 476
++ + L +G + LDP +G+LTD + LGT+P L ++ + A S R + Y
Sbjct: 14 FVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLIRVQTQRNPAILALSSRSWLNY 73
Query: 477 SSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI-QKLHIRTVPLGE 535
+ + + F+ + ++ S +AE P+ L T ST I ++ KL ++PL
Sbjct: 74 THQNLMHFTPLIFESFDYAWSFSAELSPEGLIGITGSTLRIFQIPKLGTKLKQDSIPLSY 133
Query: 536 APRRIAYQESSQTFGVI 552
PR++ ++Q F +I
Sbjct: 134 TPRKLITHPTNQYFYLI 150
>gi|221502136|gb|EEE27880.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 2131
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 62/225 (27%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHY---DDGKLQ-QIAEK--EIKGACYSMCEFNGKL 1096
+ +GTA V ++EPK+G II+ DG+L Q+A E++ + F G L
Sbjct: 1666 SLLCVGTAEVIASDSEPKEGLIILLDVRRGTDGRLVVQLAAHIHELRSGVQQLRPFQGLL 1725
Query: 1097 LASINSTVRLF---------------------------------------------EWTN 1111
LA+ N VRLF + T
Sbjct: 1726 LAACNHRVRLFGLRRELEGAAGLEAEMEGDSPQASEVHAGDRGRSSAGRRQGARARDRTE 1785
Query: 1112 EK----------ELRLECSHFNNIIALFLKVKGD-FILVGDLMRSLTLLQYKTMEGSFEE 1160
EK L L CSH +N + D + +GD++ S LL++ + +F+E
Sbjct: 1786 EKGRELCEMLKARLELVCSHSSNAFVSSMDTWHDEIVCLGDMVASAVLLRFSPKDNAFKE 1845
Query: 1161 ISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDR 1205
I+RD N W ++ L L A+ N+++ ++ S S+ R
Sbjct: 1846 IARDTNACWTLAVSCLSPNLHYLADADRNIWLLERASLLGSEGRR 1890
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 24/90 (26%)
Query: 82 YLLGDLAGRLFMLLL----------EKEEKMDGTFSVKEPK--------------VELLG 117
+LLGD++G+++ML+L E E+++ G S + P+ VE LG
Sbjct: 541 FLLGDVSGQIYMLMLFENSRPRPQMEIEQRLTGASSRESPRPSGEEASGRAARMCVEWLG 600
Query: 118 EISIPECLTYLDNGVVFVGSRLGDSQLVKL 147
+ S P L+YL NG++FV S DS L+++
Sbjct: 601 QASEPTGLSYLGNGILFVASATSDSLLLRI 630
>gi|405121632|gb|AFR96400.1| hypothetical protein CNAG_03173 [Cryptococcus neoformans var.
grubii H99]
Length = 1276
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 82/191 (42%), Gaps = 44/191 (23%)
Query: 76 NGWSERYLLGDLAGRLFMLLLEKEEK----MDGTFSVKEPKVELLGEISIPECLTYLDNG 131
+G ++GD G L E E+ MDG V LG S P +TYLD+
Sbjct: 372 HGSGASVVIGDEYGAFTALGWEFEKGLGAGMDGRVRVLR---TYLGASSPPSSITYLDSS 428
Query: 132 VVFVGSRLGDSQLVKLNR------------------SP----------------DENGT- 156
+FV S + DS L++L SP D N T
Sbjct: 429 HLFVSSAVADSVLLRLPTVESSTNVPSGKGKGREVISPIGDQLDKWEVLYEIGKDRNDTD 488
Query: 157 -YVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID- 214
+ ++E + N+AP+ D+ V E LV SG + SLR++R+G+G+EE I
Sbjct: 489 EGLEILERWMNIAPVKDLCAVKDEGGNLSHLVLASGASESNSLRVVRSGVGLEELVTIQG 548
Query: 215 LPGIKGIWALS 225
L ++ +W+L+
Sbjct: 549 LHDVQKMWSLT 559
>gi|348679545|gb|EGZ19361.1| putative cleavage and polyadenylation specificity factor CPSF
[Phytophthora sojae]
Length = 1752
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 1034 SSKFGEDPNTYFVLGTAVVHPE-ENEPKQGRIIIFHYDDG---------------KLQQI 1077
S+++ + Y V+GT V P E+E +GR++++ D KL+ +
Sbjct: 1399 SAEWNKKKRPYLVIGTGWVGPHGEDESGRGRLLLYELDYAQYVDEEGGSTSSKLPKLRLV 1458
Query: 1078 AEKEIK-GACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN-NIIALFLKVKGD 1135
KE + GA S+ + +LA++ S + ++E+ +E+ + C+ ++ + + L V D
Sbjct: 1459 FIKEHRQGAISSVVQLGPYVLAAVGSKLIVYEFKSEQ--LIGCAFYDAQMFIVTLNVVKD 1516
Query: 1136 FILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIE--ILDDEL-FLGAENSYNLFI 1192
F++ GD+ +S+ L+++ M+ +++DY P +++ E + + +L L + NL +
Sbjct: 1517 FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHV 1576
Query: 1193 CQKDSAATSDEDRTHLQEVGTVHL 1216
Q L V HL
Sbjct: 1577 MQFAPQDIESRGGQRLLRVSDFHL 1600
Score = 43.9 bits (102), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 778 NGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQ----DVQFLHGC 833
N + A++D +V R N + ++P + E +R+ ELEI D+ FL G
Sbjct: 242 NTLNALLDKSVKVGSKRKRNHMSGLMPNDITGREFL---LRLRELEIMGKVIDLAFLDGY 298
Query: 834 QNPTIICIHQD-----VNGRHVKTHE--------ISLKEKEFTKTPWKQDNIEMEASLVI 880
PT++ +H++ GR + I++ + K W N+ + +
Sbjct: 299 LEPTLMVLHEENEKNSTCGRLAAGFDTYCITVISINMNTRLHPKI-WTVKNLPSDCFKLF 357
Query: 881 PVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTI 918
P PLGG +++ + LY + + +A + S T+
Sbjct: 358 PCRAPLGGVVVLSANAFLYFNQTQFHGLATNVFASKTV 395
>gi|53791734|dbj|BAD53405.1| UV-damaged DNA-binding protein-like [Oryza sativa Japonica Group]
Length = 154
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQK 1195
T +G +E+SRDYN WMT++E+LDD +++GA+N YNLF K
Sbjct: 60 TNKGQTDELSRDYNITWMTAVEMLDDYVYIGADNCYNLFTVLK 102
>gi|19075704|ref|NP_588204.1| silencing protein Rik1 [Schizosaccharomyces pombe 972h-]
gi|13124796|sp|Q10426.2|RIK1_SCHPO RecName: Full=Chromatin modification-related protein rik1; AltName:
Full=Silencing protein rik1
gi|6016996|emb|CAB57850.1| silencing protein Rik1 [Schizosaccharomyces pombe]
Length = 1040
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 171/422 (40%), Gaps = 55/422 (13%)
Query: 125 LTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQG 184
L + G++F+GS+ +S+L+ L+ D ++S NL PI D++V L+ +
Sbjct: 308 LNSIHEGLLFIGSKNSESKLINLSTLKD--------VDSIPNLGPIHDLLV--LKNDIEK 357
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHT 244
+ C+G + SL ++ + ++ + GI L P ++ L L F T
Sbjct: 358 SFLVCAGTPRNASLIYFQHALKLDILGQTKISGILRAMVL----PSYPEHKLFLGFPSET 413
Query: 245 RVLTLSGAEVEETEMG-GFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEP 303
+ E + E+ ++ ++T + V QVT + + + ++R+ E
Sbjct: 414 VAFNIK--EDFQLELDPSLSTKERTIALSGTNGEFV-QVTSTFLCIYDSAKRSRLVYIE- 469
Query: 304 PNGKSISVVSCNKNQ---VLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNE 360
I+ +C + V+ T ++ + ++A + E E++CLD S
Sbjct: 470 ----KITNAACYQEYSAIVINGTALAIF------KKDTEVARKVFESEISCLDFS----- 514
Query: 361 ETSSEPAKAQLAAVGLWTDISARLLSLPSLEEV-CKEPLGGEIIPRSILMTCFEG----H 415
A+ Q+ VG W+ +L+ + C +PR+I++ EG
Sbjct: 515 ------AQFQIG-VGFWSK-QVMILTFSDNSSISCAFQTNVPSLPRNIIL---EGVGVDR 563
Query: 416 CYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVI 475
LLV+ G G + L + ++ K GT P + F T + +D P ++
Sbjct: 564 NLLLVSSGSGEFKSYVLFKNNLVFSETKH--FGTTPVSFRRFTMNIGTYIICNNDCPHMV 621
Query: 476 YSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGE 535
Y N L + +++ Q +C S D L + F ++ + +L R V L
Sbjct: 622 YGFNGALCYMPLSMPQSYDVCQFRDNSGKDFLISVSLGGLKFLQLNPLPELTPRKVLLEH 681
Query: 536 AP 537
P
Sbjct: 682 VP 683
>gi|351711389|gb|EHB14308.1| Splicing factor 3B subunit 3 [Heterocephalus glaber]
Length = 273
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 30/207 (14%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLN 148
G +F + LE ++ +V E +++ + + + L G +FV S G+ L ++
Sbjct: 63 GDIFKITLETDKD-----TVTENQLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIA 117
Query: 149 R--SPDENGTYVSVM---------------------ESFTNLAPIIDMVVVDLERQGQGQ 185
D+ ++S M + +L PI+ DL + Q
Sbjct: 118 HLGDDDDEPEFLSAMPLEEGDTFFFQPRPLKNLVLVDELDSLLPILFCQTADLANEDTPQ 177
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHT 244
L G SLR++R+G+ + E A +LPG +W + D +++SF+ T
Sbjct: 178 LYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVCRHIEDEFDAYIIVSFMNAT 237
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYC 271
VL++ G V + GF T C
Sbjct: 238 LVLSI-GETVGKVTDSGFLGTTSTLSC 263
>gi|47217773|emb|CAG05995.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1446
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1098 YIAAGTCLMQGEEVTCR-GRILILDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1156
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + +K +FIL DLM+S++LL+Y+
Sbjct: 1157 NGYLVSAIGQKIFLWVLKDNDLTGMAFIDTQLYIHQMMSIK-NFILAADLMKSVSLLRYQ 1215
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + SIE + D FL ++ NL++
Sbjct: 1216 EESKTLSLVSRDAKPLEVYSIEFMVDNSQLGFLVSDRDKNLYV 1258
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 102/280 (36%), Gaps = 93/280 (33%)
Query: 103 DGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVK----LNRSPDENG--- 155
DG SV+ + + C+ ++ G +F+GSRLG+S L+K L P E G
Sbjct: 315 DGMRSVRAFHFDKAAASVLTTCMVTMEPGYLFLGSRLGNSLLLKYTEKLQEMPLEEGKDK 374
Query: 156 ------------TYVSVMESFT-------------------------------------- 165
YV + SF+
Sbjct: 375 QEKEKDNDMDKQVYVHTLNSFSAHSQHDFFVDEVDEIEVYGSEAQSGTQLATYSFEVCDS 434
Query: 166 --NLAPIIDMVVVD---LERQGQG------QLVTCSGGFKEGSLRIIRNGIGIEEHACID 214
N+ P + + + L + QG ++V CSG K G+L +++ I + +
Sbjct: 435 ILNIGPCANASMGEPAFLSEEFQGNPEPDLEVVVCSGHGKNGALSVLQRSIRPQVVTTFE 494
Query: 215 LPGIKGIWALSIG----------SPKNLDNT-------------LVLSFVGHTRVLTLSG 251
LPG +W + SP + T L+LS T +L +G
Sbjct: 495 LPGCHDMWTVISNEVKEDKKVPQSPGSFTATHYSLEEDTKKHGFLILSREDSTMILQ-TG 553
Query: 252 AEVEETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
E+ E + GF + T + GN+ D + ++QV+P L+
Sbjct: 554 QEIMELDTSGFATQGPTVFAGNIGDNKYIIQVSPMGIRLL 593
Score = 41.2 bits (95), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 822 LEIQDVQFLHGCQNPTIICI---HQDVNGR-HVKTHEISLKE------KEFTKTPWKQDN 871
L I D++FLHG PT++ + +Q GR V+ + S+ ++ W N
Sbjct: 164 LNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQAQCSIVAISLNIMQKVHPVIWSLSN 223
Query: 872 IEMEASLVIPVPEPLGGAIIIGQESILY 899
+ + + V+ VP+P+GG ++ S+LY
Sbjct: 224 LPFDCTQVMAVPKPIGGVVVFAVNSLLY 251
>gi|330805789|ref|XP_003290860.1| hypothetical protein DICPUDRAFT_95240 [Dictyostelium purpureum]
gi|325078985|gb|EGC32608.1| hypothetical protein DICPUDRAFT_95240 [Dictyostelium purpureum]
Length = 1327
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 31/209 (14%)
Query: 175 VVDLERQGQG---QLVTCSGGFKE-GSLRIIRNGI--GIEEHACIDLPGIKGIWALSIGS 228
++D E Q Q ++ TC GG GS+++I N I I H + I +W+ S
Sbjct: 484 IIDFEIQKQKFTTKIYTCCGGSNSFGSVKVIENSIPTHILHHEKKRIGAIY-VWSFS--- 539
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGG-----FTSDQQTFYCGNVDPRTVLQVT 283
P +V+ + T V +S AE EE +M F +Q T YC T +QVT
Sbjct: 540 P-----YIVIGYPSSTVVEKVSVAEEEEDDMFSLDNIYFIENQATIYCYRTSDGTFVQVT 594
Query: 284 PSAAILISTESKARVSSWEPPNGK-SISVVSCNKNQVLCATGCDVYYLEV---------- 332
P +L + + R S+ G+ SI +C+++ +L ++
Sbjct: 595 PKTIVLYNNKYSKRKESYRWDVGENSIITNACSRDGLLLVAISKPNSIQSFNIVQDDSND 654
Query: 333 HGSEIKQLAHRALEYEVACLDISPLSNEE 361
HG +K L LE+EV+C+ + + E
Sbjct: 655 HGLSLKLLNSIPLEFEVSCISLPKFNENE 683
>gi|70952260|ref|XP_745310.1| splicing factor 3b, subunit 3, 130kD [Plasmodium chabaudi chabaudi]
gi|56525593|emb|CAH80831.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium chabaudi
chabaudi]
Length = 530
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 160 VMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI- 218
+++ +L+PIIDM ++D + Q+ G SLRI+++G+ IEE A +LPG
Sbjct: 407 LVDQIYSLSPIIDMKILDAKNSSLPQIYALCGRGPRSSLRILQHGLSIEELANNELPGKP 466
Query: 219 KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEET 257
K IW + + D +++SF G+T +L + G VEE
Sbjct: 467 KYIWTIKKDNSSEYDGYIIVSFEGNTLILEI-GETVEEV 504
>gi|66362282|ref|XP_628105.1| contains a UVDDB domain that is present in CPSF_A and damage specific
DNA binding protein 1 [Cryptosporidium parvum Iowa II]
gi|46227624|gb|EAK88559.1| contains a UVDDB domain that is present in CPSF_A and damage specific
DNA binding protein 1 [Cryptosporidium parvum Iowa II]
Length = 1495
Score = 56.6 bits (135), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 1114 ELRLECSHFNNIIALFLKV-KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTS 1172
EL+ + ++ + + +F+K+ G++ILVGDLMRS+ L ++ G F E+ RD + W+
Sbjct: 1188 ELKRKETYCTHTMIVFIKILNGEYILVGDLMRSVGLWEFDRYTGKFHEVCRDNSIAWVVE 1247
Query: 1173 IEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGL 1221
L +++L ++ + NL + + +DE T L + +H VG+ +
Sbjct: 1248 GIFLSKDMYLISDENRNLRVLMRTLNPENDETYTSLSCIAHLH-VGESI 1295
Score = 46.6 bits (109), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 23/143 (16%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R+L+ D GRLF++L+E ++ D V + ++ +L S + L + + F+ S+L
Sbjct: 335 RWLVLDNLGRLFIMLVEYDQ--DDIDKVVDIRLNILNRYSPFSRIVNLGDDLFFLASKLS 392
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQ--------------- 185
DS L+ N Y ++ S N+ PI D++ + +R+ + +
Sbjct: 393 DSLLL----YSKNNNFY--IISSLPNIGPIKDLIFTNFDRKEETKYEDIPSQISKRDPLP 446
Query: 186 LVTCSGGFKEGSLRIIRNGIGIE 208
L+ G G+L+ I NGIG++
Sbjct: 447 LIAACGFGSGGALKSICNGIGLQ 469
>gi|218188544|gb|EEC70971.1| hypothetical protein OsI_02599 [Oryza sativa Indica Group]
Length = 274
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 32/39 (82%)
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
T +G +E++RDYN WMT++E+LDD +++GA+N YNLF
Sbjct: 147 TNKGQTDELNRDYNITWMTAVEMLDDYVYIGADNCYNLF 185
>gi|348512553|ref|XP_003443807.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Oreochromis niloticus]
Length = 1456
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1133 YIAAGTCLMQGEEVTCR-GRILILDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1191
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I +K +FIL DLM+S++LL+Y+
Sbjct: 1192 NGYLVSAIGQKIFLWVLKDNDLTGMAFIDTQLYIHQMFSIK-NFILAADLMKSISLLRYQ 1250
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + SIE + D FL ++ NL++
Sbjct: 1251 EESKTLSLVSRDAKPLEVYSIEFMVDNNQLGFLVSDRDKNLYV 1293
Score = 46.6 bits (109), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 91/225 (40%), Gaps = 32/225 (14%)
Query: 707 EGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHG 766
E L V L+G I M + +D L + + ++E +L+ L+ +
Sbjct: 64 EKLEQVASFSLFGNIMSMASVQLVGASRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYF 123
Query: 767 NVSDRIGKPSENGIIAII--DPEARVIGLRLYNGLFKIIPLEKDNFE------------- 811
+ +N I ++ DPE R + +Y ++P KD
Sbjct: 124 EEPELRDGFVQNVHIPVVRVDPENRCAVMLVYGTKLVVLPFRKDTLTDEQESGVGEGPKS 183
Query: 812 --LKASSIRMEELE-----IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------I 855
L + I + EL+ I D++FLHG PT++ + +Q GR + I
Sbjct: 184 SFLPSYIIDVRELDEKLLNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAI 243
Query: 856 SLK-EKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
SL ++ W N+ + + V+ VP+P+GG ++ S+LY
Sbjct: 244 SLNIMQKVHPVIWSLSNLPFDCTQVMAVPKPIGGVVVFAVNSLLY 288
Score = 40.8 bits (94), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 28/127 (22%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-------------------- 224
++V CSG K G+L +++ I + +LPG +W +
Sbjct: 508 EVVVCSGYGKNGALSVLQRSIRPQVVTTFELPGCHDMWTVISSDVKEDKTDKEEVEKEEE 567
Query: 225 -SIGSPKNLDNT-----LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPR 277
P D+ L+LS T +L +G E+ E + GF + T Y GN+ D +
Sbjct: 568 EKKTEPPLEDDAKKHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVYAGNIGDNK 626
Query: 278 TVLQVTP 284
++QV+P
Sbjct: 627 YIIQVSP 633
>gi|432883539|ref|XP_004074300.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Oryzias latipes]
Length = 1456
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT V+ EE + GRI+I K + + EKE KG ++C
Sbjct: 1133 YIAAGTCVLQGEEVTCR-GRILILDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1191
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
+G L+++I + L+ + + I + +K +FIL D+M+S++LL+Y+
Sbjct: 1192 HGYLVSAIGQKIFLWALKDNDLTGMAFIDTQLYIHQMISIK-NFILAADVMKSISLLRYQ 1250
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + SIE + D FL ++ NLF+
Sbjct: 1251 EESKTLSLVSRDAKPLEVYSIEFIVDNNQLGFLVSDRDKNLFV 1293
Score = 48.1 bits (113), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 91/225 (40%), Gaps = 32/225 (14%)
Query: 707 EGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHG 766
E L V L+G + M + KD L + + ++E +L+ L+ +
Sbjct: 64 EKLEQVASFSLFGNVMSMASVQLTGASKDALLLSFKDAKLSVIEYDPGTHDLKTLSLHYF 123
Query: 767 NVSDRIGKPSENGIIAII--DPEARVIGLRLYNGLFKIIPLEKDNFE------------- 811
+ +N I I+ DPE R + +Y ++P KD
Sbjct: 124 EEPELRDGFFQNVHIPIVRVDPENRCAVMLIYGTKLVVLPFRKDTLSDEQEGGVGEGPKS 183
Query: 812 --LKASSIRMEELE-----IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------I 855
L + I + EL+ I D++FLHG PT++ + +Q GR + I
Sbjct: 184 SFLPSYIIDVRELDEKLLNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAI 243
Query: 856 SLK-EKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
SL ++ W N+ + + V+ VP+P+GG ++ S+LY
Sbjct: 244 SLNIMQKVHPVIWSLSNLPFDCTQVMAVPKPIGGVVVFAVNSLLY 288
Score = 40.4 bits (93), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 31/136 (22%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKN------------- 231
++V CSG K G+L +++ I + +LPG +W + G K
Sbjct: 504 EIVVCSGYGKNGALSVLQRSIRPQVVTTFELPGCHDMWTVISGEDKKESEGGEKEADAEK 563
Query: 232 ---LDNT-------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV- 274
D T L+LS T +L +G E+ E + GF + T + GN+
Sbjct: 564 KEEQDKTEPPLEDDAKKHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIG 622
Query: 275 DPRTVLQVTPSAAILI 290
D + ++QV+P L+
Sbjct: 623 DNQYIIQVSPMGLRLL 638
>gi|354547430|emb|CCE44165.1| hypothetical protein CPAR2_503890 [Candida parapsilosis]
Length = 1171
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 138/329 (41%), Gaps = 37/329 (11%)
Query: 233 DNTLVLSFVGHTRVLTLSGAEV-EETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIS 291
D LV++ + L LS EV EE F DQ T V +++QV + L
Sbjct: 465 DEYLVITSTLAFKTLVLSIGEVIEEVNDSKFVMDQPTVAVQQVGKSSIVQVYSNG--LRH 522
Query: 292 TESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVA 350
K +V++W PP G +I+ + N QVL + ++ Y E E QL EV+
Sbjct: 523 INGKKKVTNWYPPAGITITHATTNNQQVLLGMSNLELVYFETD-PEDDQLREYQDRLEVS 581
Query: 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRS---- 406
SP+ + E ++ A VG +D + ++SL S + C + + + S
Sbjct: 582 ----SPIRSMCIPKE--QSSFAVVGC-SDETISVVSLQS--QNCLQVKSLQALSSSANSL 632
Query: 407 ILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR-SLSTTNV 465
+++T + + + +G +D +G+L+D + LG +P L + S T V
Sbjct: 633 VMLTHNPSTTLIHIGMDNGVYVRTKIDTFNGKLSDTRIKYLGPKPVTLNELKLSDDITGV 692
Query: 466 FACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAES---------YPDSLALATDSTFT 516
A S +P + Y K + + + + S +E Y D+L + F+
Sbjct: 693 LAISTKPWIGYFYQGKYRCTPLLDIDIINGASFKSEDIGGEGIVGIYDDNLVI-----FS 747
Query: 517 FGTIDEI----QKLHIRTVPLGEAPRRIA 541
G D I Q+L + + L PR+I
Sbjct: 748 VGKEDSIFDPNQELTVTELNLRYTPRKIV 776
>gi|58269920|ref|XP_572116.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57228352|gb|AAW44809.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1276
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 37/147 (25%)
Query: 116 LGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNR------------------SP------ 151
LG S P +TYLD+ +FV S + DS L++L + SP
Sbjct: 413 LGASSPPSSITYLDSSHLFVSSAVADSVLLRLPKVESSSSVSSGKGKGRAVTSPIGDQAD 472
Query: 152 ----------DENGT--YVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
D N T ++E + N+AP+ D+ VV E LV SG + SLR
Sbjct: 473 KWEVLYEIGKDRNDTDGGPEILERWMNIAPVKDLCVVKDEGGNLSHLVLASGASESNSLR 532
Query: 200 IIRNGIGIEEHACID-LPGIKGIWALS 225
++R+G+G+EE I L ++ +W L+
Sbjct: 533 VVRSGVGLEELVTIQGLHDVQKMWPLT 559
Score = 44.3 bits (103), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 418 LLVALGDGSMFYFSLDP-----ASGRLTDKKKVT-LGTQPTVLKTFRSLSTTN---VFAC 468
LL L +G + + L+ A G + K T LG +P VL S
Sbjct: 747 LLSGLDNGLLHIYDLNTSDSGEAEGLMVKSSKTTSLGLRPLVLHPCESTHGDEKVISVGL 806
Query: 469 SDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHI 528
++R +VI+ S ++ FS+VN++ V S++ S P + S + ++ ++KLH+
Sbjct: 807 TERMSVIFESKDRIEFSSVNIKNVMAATSVDTSSGPVFALFSRTSGLSLVKVNSLKKLHV 866
Query: 529 RTVPLG-EAPRRIAYQESSQTFGVITTR 555
+T G E+ ++ Y + + +TR
Sbjct: 867 QTCDTGNESISKLTYMDEYKAIACGSTR 894
>gi|403216596|emb|CCK71092.1| hypothetical protein KNAG_0G00350 [Kazachstania naganishii CBS
8797]
Length = 1263
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 117/274 (42%), Gaps = 36/274 (13%)
Query: 83 LLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPEC--LTYLDNGVVFVGSRLG 140
LL + G LF L +E++ + +G +PK +IP L NG +F+ +
Sbjct: 324 LLQNELGDLFKLQIERDPQ-NG----DKPKCSCTYFDTIPRATKLHIFSNGYMFLHAEYN 378
Query: 141 DSQLVKLN---------------RSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQ 185
D+ L+++ R+ ++ +SV+E NL P++ +++ +
Sbjct: 379 DNALLQIESLGSMEFKIETEYTPRTQEQEN--LSVVERQLNLNPLLS---ANVDPGVPFK 433
Query: 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLP-GIKGIWALSIGSPKNLDNTLVLSFVGHT 244
++T + +G R++ N + ++ LP K IWAL LV++F T
Sbjct: 434 IITNTS---DGEARLLTNAVKLKSLITAPLPPNPKKIWALKTNIGNEYHELLVIAFNSLT 490
Query: 245 RVLTLSGAEVEETEMGG----FTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSS 300
L SG +E + QT + + P ++QV + + + T++ V +
Sbjct: 491 TFLKTSGDSIENLNLPSPPAFIMKHDQTLHIATLTPNYIIQVCRNLFVQVRTDTFKCVHT 550
Query: 301 WEPPNGKSISVVSCNKNQV-LCATGCDVYYLEVH 333
W PP G I + + Q+ L + ++ Y E++
Sbjct: 551 WYPPAGIHIVSAASTQTQLALALSNSEIIYFEIY 584
>gi|357496593|ref|XP_003618585.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355493600|gb|AES74803.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 702
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 133/306 (43%), Gaps = 16/306 (5%)
Query: 254 VEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVS 313
V+E GF + + +++QV P+ I + ++ W P ++I+ V
Sbjct: 35 VKEVTDNGFLDTTPSLSVSLIGDDSLMQVHPNGIRHIRED--GHINEWRTPGKRTIAKVG 92
Query: 314 CNKNQVLCA-TGCDVYYLEVH-GSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQL 371
N+ QV+ A G ++ Y EV ++ ++ + +VACLDI+P+ +++
Sbjct: 93 SNRLQVVIALNGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQ-----RSRF 147
Query: 372 AAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-EGHCYLLVALGDGSMFYF 430
AVG + D + R+LSL + C + LG + + + F E + G+G +
Sbjct: 148 LAVGSY-DKTIRILSLDP--DDCMQTLGIQSLSSASESLLFLEVQASVGGEDGNGVLSRT 204
Query: 431 SLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLR 490
+D +G L+D + LG +P L + S RP + Y + + ++
Sbjct: 205 VVDMVTGLLSDSRSPFLGLRPPKLFPIVVRGKRAMLCLSSRPWLGYIHQGHFLLTPLSYE 264
Query: 491 QVNHMCSLNAESYPDS-LALATDSTFTFGTIDEIQKLHIRTV-PLGEAPRRIAYQESSQT 548
+ S +++ + +ALA ++ F TI+ + + TV PL P + Q +
Sbjct: 265 TLEFAASFSSDQCVEGVVALAGEALRIF-TIERLGETFNETVIPLRYTPMKFVLQPKRKL 323
Query: 549 FGVITT 554
VI +
Sbjct: 324 LVVIES 329
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Query: 1062 GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LE 1118
G I I+ + +DG+ L+ + + +++G ++ +F G+LLA I +R ++ + LR E
Sbjct: 430 GFIHIYRFLEDGRSLELLHKTQVEGVPLALSQFQGRLLAGIGPVLRFYDLGKRRLLRKYE 489
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
F N I + ++ D I VGD S +Y+ E + D P W+T+ +D
Sbjct: 490 NKLFPNTI-VSIQTYRDRIYVGDTQESFHYCKYRWDENQLYIFADDCVPRWLTASYHIDF 548
Query: 1179 ELFLGAE 1185
+ G E
Sbjct: 549 DTMAGIE 555
>gi|134113697|ref|XP_774433.1| hypothetical protein CNBG0790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257071|gb|EAL19786.1| hypothetical protein CNBG0790 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1276
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 37/147 (25%)
Query: 116 LGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNR------------------SP------ 151
LG S P +TYLD+ +FV S + DS L++L + SP
Sbjct: 413 LGASSPPSSITYLDSSHLFVSSAVADSVLLRLPKVESSSSVSSGKGKGRAVTSPIGDQAD 472
Query: 152 ----------DENGT--YVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
D N T ++E + N+AP+ D+ VV E LV SG + SLR
Sbjct: 473 KWEVLYEIGKDRNDTDGGPEILERWMNIAPVKDLCVVKDEGGNLSHLVLASGASESNSLR 532
Query: 200 IIRNGIGIEEHACID-LPGIKGIWALS 225
++R+G+G+EE I L ++ +W L+
Sbjct: 533 VVRSGVGLEELVTIQGLHDVQKMWPLT 559
Score = 44.7 bits (104), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 414 GHCYLLVALGDGSMFYFSLDPA-SGR-----LTDKKKVTLGTQPTVLKTFRSLSTTN--- 464
G LL L +G + + L+ + SG + K +LG +P VL S
Sbjct: 743 GGIQLLSGLDNGLLHIYDLNTSESGEAEGLTVKSSKTTSLGLRPLVLHPCESTHGDEKVI 802
Query: 465 VFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ 524
++R +VI+ S ++ FS+VN++ V S++ S P + S + ++ ++
Sbjct: 803 SVGLTERMSVIFESKDRIEFSSVNIKNVMAATSVDTSSGPVFALFSRTSGLSLVKVNSLK 862
Query: 525 KLHIRTVPLG-EAPRRIAYQESSQTFGVITTR 555
KLH++T G E+ ++ Y + + +TR
Sbjct: 863 KLHVQTCDTGNESISKLTYMDEYKAIACGSTR 894
>gi|221055487|ref|XP_002258882.1| CPSF (cleavage and polyadenylation specific factor), subunit A
[Plasmodium knowlesi strain H]
gi|193808952|emb|CAQ39655.1| CPSF (cleavage and polyadenylation specific factor), subunit A,
putative [Plasmodium knowlesi strain H]
Length = 2478
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 30/189 (15%)
Query: 1042 NTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIK------GACYSMCEFNGK 1095
+T +GTA + EP G I +F K Q K I G + +F K
Sbjct: 2134 HTLICVGTANNNERITEPSSGHIYVF-VAKKKTNQFEIKHIYTYNVNCGGITHLKQFRDK 2192
Query: 1096 LLASINSTVRLFEWTN------------EKELRLECSHFNNIIALF--------LKVKGD 1135
++A++N+TV + + N K +++E + +A F L V +
Sbjct: 2193 IVAAVNNTVLILDIRNFLTNLGTYIYNASKAMKVESNDAFLEVASFTPSSWIMSLDVVKN 2252
Query: 1136 FILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQK 1195
+I+VGD+M S+TLL Y E+ RDY W T+ L ++ FL ++ N + QK
Sbjct: 2253 YIVVGDIMTSVTLLSYDFENAILNEVCRDYANIWCTA---LSEDHFLVSDMESNFLVLQK 2309
Query: 1196 DSAATSDED 1204
+ +DE+
Sbjct: 2310 SNIKFNDEE 2318
>gi|167380951|ref|XP_001733297.1| DNA repair protein xp-E [Entamoeba dispar SAW760]
gi|165902459|gb|EDR28278.1| DNA repair protein xp-E, putative [Entamoeba dispar SAW760]
Length = 349
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFE---EISRDYNPNWMTSIEILDDELF 1181
+I L++K G+ ILVGDLM+S+++ + + E+SRD+ ++ T+IE +D+ +
Sbjct: 125 LIGLYVKTMGNKILVGDLMKSISVYSFDNNGNNKNCLNEVSRDFYASYTTAIEFVDENCY 184
Query: 1182 LGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGL-VQCR 1225
L ++++ NL + +S E R L +H VG+ + V C+
Sbjct: 185 LSSDSNSNLLVFNTNSTGNESE-RFRLNNCAHIH-VGECINVMCK 227
>gi|410911304|ref|XP_003969130.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Takifugu rubripes]
Length = 1444
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1121 YIAAGTCLMQGEEVTCR-GRILILDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1179
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + +K +FIL DLM+S++LL+Y+
Sbjct: 1180 NGYLVSAIGQKIFLWVLKDNDLTGMAFIDTQLHIHQMMSIK-NFILAADLMKSVSLLRYQ 1238
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + SIE + D FL ++ NL++
Sbjct: 1239 EESKTLSLVSRDAKPLEVYSIEFMVDNNQLGFLVSDRDKNLYV 1281
Score = 46.2 bits (108), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 30/149 (20%)
Query: 781 IAIIDPEARVIGLRLYNGLFKIIPLEKDNFE---------------LKASSIRMEELE-- 823
I +DPE R + +Y ++P KD L I + EL+
Sbjct: 140 IVRVDPENRCAVMLIYGTKLVVLPFRKDTLTDEQEVGVGEGPKSSFLPTYIIDVRELDEK 199
Query: 824 ---IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQD 870
I D++FLHG PT++ + +Q GR + ISL ++ W
Sbjct: 200 LLNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHPVIWSLS 259
Query: 871 NIEMEASLVIPVPEPLGGAIIIGQESILY 899
N+ + + V+ VP+P+GG ++ S+LY
Sbjct: 260 NLPFDCTQVMAVPKPIGGVVVFAVNSLLY 288
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 25/130 (19%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSP--KNLDNT------- 235
++V CSG K G+L +++ I + +LPG +W + P K + T
Sbjct: 500 EVVVCSGHGKNGALSVLQRSIRPQVVTTFELPGCHDMWTVISNEPVQKEQEETEREGKEK 559
Query: 236 --------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTVL 280
L+LS T +L +G E+ E + GF + T + GN+ D + ++
Sbjct: 560 TEPPAEEDTKKHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNKYII 618
Query: 281 QVTPSAAILI 290
QV+P L+
Sbjct: 619 QVSPMGIRLL 628
>gi|257215708|emb|CAX83006.1| Cleavage and polyadenylation specificity factor subunit 1
[Schistosoma japonicum]
Length = 462
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 46/183 (25%)
Query: 824 IQDVQFLHGCQNPTIICIHQD-------VNGRHVKTHEISLK---EKEFTKTPWKQDNIE 873
+ D+QFLHG PT++ +++ V+ R ++L +K W Q+++
Sbjct: 214 VLDMQFLHGFYEPTLLVLYEPIGTWAGRVSARRDTCCIVALSFNLQKRTNPVIWFQESLP 273
Query: 874 MEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIV--CYAKVDAN---- 927
+ VIPVP+P+GG +I+ SILY Q + S ++ CYA++ N
Sbjct: 274 FDCRSVIPVPQPIGGVVIMAANSILYLK---------QTLPSCSLPLNCYAQISTNFPMR 324
Query: 928 ------------GER--------YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKV-ELLG 966
G R +L+G +G L++L L E+ S+ KV +
Sbjct: 325 QDVPSCGPLSIDGCRVVTLNETQFLIGTRSGNLYLLSLWLEQATQTVTSLLFHKVGHAVP 384
Query: 967 EHC 969
HC
Sbjct: 385 PHC 387
Score = 43.5 bits (101), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
++L+G +G L++L L E+ S+ KV G P C+ L++ +F+GSR
Sbjct: 347 QFLIGTRSGNLYLLSLWLEQATQTVTSLLFHKV---GHAVPPHCMVLLESKYLFIGSRFC 403
Query: 141 DSQLVKLNRS 150
DS L+K+N S
Sbjct: 404 DSVLMKINHS 413
>gi|209881602|ref|XP_002142239.1| CPSF A subunit domain-containing protein [Cryptosporidium muris RN66]
gi|209557845|gb|EEA07890.1| CPSF A subunit domain-containing protein [Cryptosporidium muris RN66]
Length = 1509
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 1111 NEKELRLECSHFN----NIIALFLKV-KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDY 1165
NEK + + + N + + +FLK+ K +++LVGDLMRS+ L +Y + FEEI RD
Sbjct: 1200 NEKTPKFKFNKINSYSTHTMIVFLKLWKDEYLLVGDLMRSVGLWKYDKVAKQFEEICRDP 1259
Query: 1166 NPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVH 1215
+ W+ ++ L++ ++ + N+ I K +DE T LQ + H
Sbjct: 1260 SLAWVMDGIFINKNLYMVSDENKNVRILTKPENPINDEMDTVLQSIAHFH 1309
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 76 NGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFV 135
+G +R+L+ D G LF++++ K++ + ++ KV++LG+ S L L N + F+
Sbjct: 328 DGKLKRWLVLDNTGGLFIMVVYKDQNL----KIENIKVDILGQYSPFSVLLSLKNDIYFI 383
Query: 136 GSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVV------------------D 177
GS++ DS ++ + + +M+ N+ PI D++ +
Sbjct: 384 GSKICDSLVLYIYHNKP------LIMQIIHNIGPIRDLLFIRDNEYREDIVNENPLSNTQ 437
Query: 178 LERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEH 210
+ + LV G GS +II NGIG+ ++
Sbjct: 438 ISKNLSLPLVAACGFGNSGSFKIICNGIGLNQY 470
>gi|301103686|ref|XP_002900929.1| cleavage and polyadenylation specificity factor subunit, putative
[Phytophthora infestans T30-4]
gi|262101684|gb|EEY59736.1| cleavage and polyadenylation specificity factor subunit, putative
[Phytophthora infestans T30-4]
Length = 1561
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 1034 SSKFGEDPNTYFVLGTAVVHPE-ENEPKQGRIIIFHYD------------DGKLQQIAEK 1080
S ++ + Y V+GT V P E+E +GR++++ D GKL ++
Sbjct: 1208 SPEWNKKKRPYLVVGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLV 1267
Query: 1081 EIK----GACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN-NIIALFLKVKGD 1135
IK GA + + +LA++ S + ++E+ +E+ + C+ ++ + + L V D
Sbjct: 1268 FIKEHRQGAISMVSQLGPYVLAAVGSKLIVYEFKSEQ--LIGCAFYDAQMYIVTLSVVKD 1325
Query: 1136 FILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIE--ILDDEL-FLGAENSYNLFI 1192
F++ GD+ +S+ L+++ M+ +++DY P +++ E + + +L L + NL +
Sbjct: 1326 FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHV 1385
Query: 1193 CQKDSAATSDEDRTHLQEVGTVHL 1216
Q L V HL
Sbjct: 1386 MQFAPQDIESRGGQRLLRVSDFHL 1409
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 778 NGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQ----DVQFLHGC 833
N + A++D +V R N + ++P + E +R+ E+EI D+ FL G
Sbjct: 73 NTLNALLDKSVKVGAKRKRNHMSGLMPNDITGREFL---LRLREVEITGKVIDLAFLDGY 129
Query: 834 QNPTIICIHQDVN-----GR--------HVKTHEISLKEKEFTKTPWKQDNIEMEASLVI 880
PT++ +H++ + GR ++ I++K + K W N+ + +I
Sbjct: 130 LEPTLMVLHEENDKNSTCGRLAVGFDTYYLTVISINMKTRLHPKI-WTVKNLPSDCFRLI 188
Query: 881 PVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTI 918
P PLGG +++ +ILY + + +A + S T+
Sbjct: 189 PCRAPLGGVVVLSANAILYFNQTQFHGLATNVFASKTV 226
>gi|70954357|ref|XP_746229.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526771|emb|CAH77136.1| hypothetical protein PC000016.02.0 [Plasmodium chabaudi chabaudi]
Length = 372
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 1066 IFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNN 1124
++ YD + KL + I+ Y C FNG+++ S+ + +R++ +K+L +C + +
Sbjct: 84 VYTYDINYKLNLLHITPIEDQPYCFCPFNGRVIVSVGNKLRIYA-LGKKKLLKKCEYKDI 142
Query: 1125 IIALF-LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
A+ +KV GD I D+ S+ + Y + + IS D P W+T EILD +
Sbjct: 143 PEAIVSIKVSGDRIFASDIRESVLIFFYDSNQNVIRLISDDIIPRWITCSEILDHHTIMA 202
Query: 1184 AENSYNLFICQKDSAATSDE 1203
A+ ++FI + A +E
Sbjct: 203 ADKFDSVFILRVPEEAKQEE 222
>gi|145348791|ref|XP_001418827.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579057|gb|ABO97120.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1386
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 25/222 (11%)
Query: 996 ADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT-----YFVLGTA 1050
A+ +ME++ L++ + + H L PGE+ + + + D NT +GTA
Sbjct: 1007 ANDDMELQYSVRLLV-PGSLDSAWQHALEPGEHVQCVRNVQL-RDINTGALLSLLAVGTA 1064
Query: 1051 VVHPEENEPKQGRIIIFHY--------DDG---KLQQIAEKEIKGACYSMCEFNGKLLAS 1099
+ E+ P +GR+I+F DG K Q +E K AC ++ +G L+ +
Sbjct: 1065 MPGGEDT-PCRGRVILFQMVWERDAESMDGYRWKGQVCCVREAKMACTALSALDGHLIVA 1123
Query: 1100 INSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT--MEGS 1157
+ + + + W + EL I + + V +FILVGDL + L ++K E S
Sbjct: 1124 VGTKLTVHTW-DGVELNSVAFFDTPIHTVSINVVKNFILVGDLEKGLHFFRWKANGFEKS 1182
Query: 1158 FEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFICQKD 1196
++S+D++ + S E L D LG++ S N I D
Sbjct: 1183 IIQLSKDFDRMDVVSTEFLIDGATLSLLGSDMSGNARIFGYD 1224
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 54/267 (20%)
Query: 688 DLNLVVAKNNRIEIHTVTPEG----LRPVKEIFLYGKIAVMKFFR----GPTDKKDLLFI 739
D NL+VA NRI ++ V G L E G I M R P +++D L I
Sbjct: 32 DPNLIVASANRITVYAVNRRGDEESLDVCAEFDAQGAIGSMSVLRRRFGAPRNQRDALLI 91
Query: 740 ITQRYNAMILE---CRGDI--DNLEILTKAHG-NVSDRIGKPSENGIIAIIDPEARVIGL 793
+ ++E GD+ ++ A G N + S + + DPE R +
Sbjct: 92 AIRERKLSVVEYDAATGDVCCSSMHSFESALGCNPLGTTLRMSREAPLVVSDPEGRCAAV 151
Query: 794 RLYN----GLFKIIPLE----------------------KDNFELKASSIRMEELEIQDV 827
L G +++P +++F L +R+ I+D
Sbjct: 152 VLREDGVAGKVRVLPSVDGGLGLVANDDEGRVRGPAASVRESFPLHLPGVRL----IRDA 207
Query: 828 QFLHGCQNPTIICIHQDV---NGRHVKTHE----ISLK---EKEFTKTPWKQDNIEMEAS 877
FLHG P + +++ GR+ + + ++L +K+ W++ N+ +
Sbjct: 208 CFLHGYGEPALAVLYEKTPTWAGRYNLSKDTCEIVALSVDVDKQKGTVIWRRQNLPSSSY 267
Query: 878 LVIPVPEPLGGAIIIGQESILYHSGKS 904
+ + PLGGA++ Q+ +L+ S +S
Sbjct: 268 KLTALLPPLGGALVFSQDFLLHESQES 294
>gi|403373826|gb|EJY86839.1| hypothetical protein OXYTRI_09860 [Oxytricha trifallax]
Length = 1380
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 26/179 (14%)
Query: 81 RYLLGDLAGRLFMLLLEKEE----KMDGTFSVKEPK----VELLGEISIPEC--LTYLDN 130
RYL G L++L E G + E +E L + +P C L YLDN
Sbjct: 340 RYLFATECGDLYLLAFNLEYLHLVTSIGNINPHEATSFMMIEFLAQ-KLPSCTTLNYLDN 398
Query: 131 GVVFVGSRLGDS--QLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLE--RQGQGQL 186
G+ F GS+L DS L++ + ++ Y+S+ + + +L I D+ + + + R Q L
Sbjct: 399 GLFFYGSKLADSLTALLETENTGHKDYLYISIRKRYESLGCISDLAIREQQNIRGQQKDL 458
Query: 187 VTCSGGFKEGSLRIIRNGIGIEEHACID-LPGIK--GIWALSIGSPKNLDNTLVLSFVG 242
V G + ++R G+ ++ A D LP I+ GI+ L+ + +++ FVG
Sbjct: 459 VVVGGQGHNSHISVLRKGVSVKTLAATDKLPQIRDNGIFILA--------SKILIHFVG 509
Score = 48.1 bits (113), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 24/151 (15%)
Query: 673 PTDKKDLLFIITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIA-VMKFFRGPT 731
P D+K + + D NL+VA++N + I + + EI + +I ++K P
Sbjct: 44 PNDQKSMY-----KIDSNLIVARSNHLAIMKIIDNDIEDFYEIPINDQIVQILKVPSDPF 98
Query: 732 DKK---------------DLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPS 776
++K D +F++T +N ++ I+ + GN+SD G+
Sbjct: 99 NEKAGKIQIGGSANKKVQDYIFVLTADFNCLLF---AHDTKQGIVCLSTGNISDVTGQKR 155
Query: 777 ENGIIAIIDPEARVIGLRLYNGLFKIIPLEK 807
E + + R IGL LY + KIIPL K
Sbjct: 156 EPPYSVFLGSDGRYIGLMLYENIIKIIPLVK 186
Score = 47.4 bits (111), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 131/293 (44%), Gaps = 40/293 (13%)
Query: 950 KMDGTFSVKEPKVELLGEHCKGPVVEMSSL--SYIKPGSTKQSTANQPADFNMEVEVHNL 1007
++D S + +++ E CK +V +L + ++ + + N PA V+ +
Sbjct: 881 QLDNFNSTQLKQIKFDKEVCKISLVPNENLMIALMEVPNYEYLDLNSPA-------VNQI 933
Query: 1008 LIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT----------YFVLGTAVVHPEEN 1057
++D +T E+L L E A L F + P++ Y +GTA++ +E
Sbjct: 934 ALLDSSTMEMLELFSLQKEEIASCLYL--FEKKPSSATLSIRNQSRYVAIGTAIIKTDEY 991
Query: 1058 EPKQGRIIIFHYDDGKLQQIAEKEIK--GACYS--MCEFNGKLLASINSTVRLFEWT-NE 1112
P +GR++IF D + + I + + G+ S M + L+ +N+ ++LF
Sbjct: 992 LPSKGRLMIFEIDTRQRKLIIKHSFQTNGSVQSIAMLRDDKYLVLGVNNDLQLFSMQIKP 1051
Query: 1113 KELRLEC-------SHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS--FEEISR 1163
+E++L+ + I A+ + ++VGD+MR+L +K + + E +
Sbjct: 1052 QEIKLQLLQTLQVGTAIQQIFAV-----NNTVVVGDIMRALYTFDFKEQKQNKLLNESAH 1106
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
+ W+ ++ L + + + N+F+ K+ T+D ++ L V + +
Sbjct: 1107 TNHSIWVNTMLPLSESNTMVFDKECNMFVFNKNLLPTNDHEKFKLNMVACMKI 1159
>gi|301093545|ref|XP_002997618.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110008|gb|EEY68060.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1744
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 1034 SSKFGEDPNTYFVLGTAVVHPE-ENEPKQGRIIIFHYD------------DGKLQQIAEK 1080
S ++ + Y V+GT V P E+E +GR++++ D GKL ++
Sbjct: 1391 SPEWNKKKRPYLVVGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLV 1450
Query: 1081 EIK----GACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN-NIIALFLKVKGD 1135
IK GA + + +LA++ S + ++E+ +E+ + C+ ++ + + L V D
Sbjct: 1451 FIKEHRQGAISMVSQLGPYVLAAVGSKLIVYEFKSEQ--LIGCAFYDAQMYIVTLSVVKD 1508
Query: 1136 FILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIE--ILDDEL-FLGAENSYNLFI 1192
F++ GD+ +S+ L+++ M+ +++DY P +++ E + + +L L + NL +
Sbjct: 1509 FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHV 1568
Query: 1193 CQKDSAATSDEDRTHLQEVGTVHL 1216
Q L V HL
Sbjct: 1569 MQFAPQDIESRGGQRLLRVSDFHL 1592
Score = 48.1 bits (113), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 778 NGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQ----DVQFLHGC 833
N + A++D +V R N + ++P + E +R+ E+EI D+ FL G
Sbjct: 243 NTLNALLDKSVKVGAKRKRNHMSGLMPNDITGREFL---LRLREVEITGKVIDLAFLDGY 299
Query: 834 QNPTIICIHQDVN-----GRHVKTHE--------ISLKEKEFTKTPWKQDNIEMEASLVI 880
PT++ +H++ + GR + I++K + K W N+ + +I
Sbjct: 300 LEPTLMVLHEENDKNSTCGRLAVGFDTYCLTVISINMKTRLHPKI-WTVKNLPSDCFRLI 358
Query: 881 PVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTI 918
P PLGG +++ +ILY + + +A + S T+
Sbjct: 359 PCRAPLGGVVVLSANAILYFNQTQFHGLATNVFASKTV 396
>gi|76157351|gb|AAX28300.2| SJCHGC08809 protein [Schistosoma japonicum]
Length = 225
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 45/175 (25%)
Query: 824 IQDVQFLHGCQNPTIICIHQD-------VNGRHVKTHEISLK---EKEFTKTPWKQDNIE 873
+ D+QFLHG PT++ +++ V+ R ++L +K W Q+++
Sbjct: 56 VLDMQFLHGFYEPTLLVLYEPIGTWAGRVSARRDTCCIVALSFNLQKRTNPVIWFQESLP 115
Query: 874 MEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIV--CYAKVDAN---- 927
+ VIPVP+P+GG +I+ SILY Q + S ++ CYA++ N
Sbjct: 116 FDCRSVIPVPQPIGGVVIMAANSILYLK---------QTLPSCSLPLNCYAQISTNFPMR 166
Query: 928 ------------GER--------YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKV 962
G R +L+G +G L++L L E+ S+ KV
Sbjct: 167 QDVPSCGPLSIDGCRVVTLNETQFLIGTRSGNLYLLSLWLEQATQTVTSLLFHKV 221
>gi|320165260|gb|EFW42159.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 2631
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 82/209 (39%), Gaps = 28/209 (13%)
Query: 360 EETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLL 419
+ S P L A+ LW + + LP +E V + G+++ RS+ + EG L
Sbjct: 1655 QSQSVAPKATTLVAISLWKTMDVLVFQLPGMELVAQHRFAGDVVVRSLALHAIEGRIKLF 1714
Query: 420 VALGDGSMFYFSLDPASG--------RLTDKKKVTLGTQPTVLKTF-------------- 457
V L DG + F+L P S +++ V +G+ P L+ F
Sbjct: 1715 VGLADGHLVQFTLVPRSVVAGTKCELEFAERRAVLVGSSPLTLEVFPLAGPADNDHGESV 1774
Query: 458 -RSLSTTNVFACSDRPTVIY--SSNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDS 513
+ C D+P ++ ++ + +N+ C ++ + S L LA
Sbjct: 1775 EAGRPPVGLLVCCDKPALVLPGKTDSQTQVLPLNIALAEKSCCFSSALFRQSTLLLAAQG 1834
Query: 514 TFTFGTIDEI--QKLHIRTVPLGEAPRRI 540
+ T ++ ++LH + LG P I
Sbjct: 1835 RISVATFAQLDGKQLHAEKLLLGATPLAI 1863
>gi|240280498|gb|EER44002.1| pre-mRNA-splicing factor rse1 [Ajellomyces capsulatus H143]
Length = 305
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
Query: 1051 VVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110
VV+P I F + +L+ I + +++ ++ F G+LLA I + +R+++
Sbjct: 2 VVNPRSCTAGFIHIYRFQEEGKELEFIHKTKVEQPPMALLGFQGRLLAGIGTDLRIYDLG 61
Query: 1111 NEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWM 1170
++ LR + + + L+ +G I+V D+ SLT + YK E D W
Sbjct: 62 MKQMLRKCQASVVPHLVVGLQTQGSRIIVSDVQESLTYVVYKYQENRLIPFVDDVISRWT 121
Query: 1171 TSIEILDDELFLGAENSYNLFI--CQKDSAATSDED 1204
T ++D E G + NL++ C ++ +DED
Sbjct: 122 TCTTMVDYETVAGGDKFGNLWLLRCPAKASEEADED 157
>gi|308459872|ref|XP_003092248.1| CRE-CPSF-1 protein [Caenorhabditis remanei]
gi|308253976|gb|EFO97928.1| CRE-CPSF-1 protein [Caenorhabditis remanei]
Length = 1448
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
Query: 781 IAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELE-----IQDVQFLHGCQN 835
I DP R +Y I+P +++ + + I +++++ + D+ FL G
Sbjct: 141 IVRTDPSNRCAASLVYGKHIAILPFHENSKRILSYIIPLKQIDPRLDNVADMVFLDGYYE 200
Query: 836 PTIICIH---QDVNGRHVKTHE--------ISLKEKEFTKTPWKQDNIEMEASLVIPVPE 884
PTI+ ++ Q GR ++ +++ +++F W+ N+ M+ + ++P+P+
Sbjct: 201 PTILFLYEPLQTTPGRACVRYDTMCIMGVSVNIVDRQFAVV-WQTANLPMDCTSLLPIPK 259
Query: 885 PLGGAIIIGQESILY 899
PLGGA++ G +I+Y
Sbjct: 260 PLGGALVFGSNTIVY 274
Score = 41.6 bits (96), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R +G G L++L L G +VK + + E SI CLT G +F+GSRLG
Sbjct: 320 RIAVGGRDGVLYLLRLVTSS---GGATVKSMEFSRVWETSIAYCLTVCAPGHLFIGSRLG 376
Query: 141 DSQLVK 146
DSQLV+
Sbjct: 377 DSQLVE 382
>gi|383863556|ref|XP_003707246.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Megachile rotundata]
Length = 1415
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 52/266 (19%)
Query: 686 RTDLNLVVAKNNRIEIHTVTPE----------GLRPVK-------EIFLYGKIAVMKFFR 728
RT+ LVVA N I + + P+ RP K + L+G + M+
Sbjct: 25 RTEKCLVVAGGNIIRVFRLIPDVDITKREKYTESRPPKMKLECLAQYTLHGNVMSMQAVT 84
Query: 729 GPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSD-RIGKPSENGI-IAIIDP 786
++D L + + ++E DI +L ++ + + R G + + I I +DP
Sbjct: 85 LVGSQRDSLLLSFRDAKLSVVEYDQDIHDLRTVSLHYFEEEEIRDGWTNHHHIPIVRVDP 144
Query: 787 EARVIGLRLYNGLFKIIPLEKD----NFEL----KASS----------IRMEELE----- 823
E R + +Y ++P +KD + +L KASS I ++ LE
Sbjct: 145 EGRCAVMLIYGRKLVVLPFKKDPSLDDGDLLDNSKASSNKTPILSSYMIVLKSLEEKMDN 204
Query: 824 IQDVQFLHGCQNPTIICIHQDV---NGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ +++ V +GR + ISL ++ W N+
Sbjct: 205 IIDLQFLHGYYEPTLLILYEPVRTFSGRIAVRQDTCAMVAISLNIQQRVHPIIWSVSNLP 264
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ +PV +PLGG +I+ S++Y
Sbjct: 265 FDCYQAVPVKKPLGGTLIMAVNSLIY 290
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y VLGT + E+ + GRI+IF + +QI KE KG ++ +
Sbjct: 1091 YIVLGTNYNYGEDITSR-GRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPITAITQV 1149
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
+G L++++ + +++ + + + I L +K IL+ D+ +S++LL+++
Sbjct: 1150 SGFLVSAVGQKIYIWQLKDNDLVGVAFIDTQIYIHQMLSIKS-LILIADVYKSISLLRFQ 1208
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLG-----AENSYNLFICQKDS 1197
+ +SRD+ P + +IE L D LG E++ LF+ Q +S
Sbjct: 1209 EEYRTLSLVSRDFRPAEVYTIEYLIDNNNLGFLVADGESNIALFMYQPES 1258
Score = 44.7 bits (104), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
+LVT SG K G+L +++ I + +LPG + +W + IG+ N +
Sbjct: 505 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTV-IGALNNDEQVRPEAEGSHA 563
Query: 236 -LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDP-RTVLQVT 283
L+LS T +L +G E+ E + GF++ T + GN+ R ++QVT
Sbjct: 564 FLILSQEDSTMILQ-TGQEINEVDQSGFSTQGSTVFAGNLGANRYIVQVT 612
>gi|85682925|gb|ABC73438.1| CG13900 [Drosophila miranda]
Length = 341
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 15/219 (6%)
Query: 1015 FEILHAHQLFP-----GEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK---QGRIII 1066
+ +H +F E +S+ KF + + L + + P+ G + I
Sbjct: 44 LDAMHGQTMFSMSLAQNEAIMSMAMVKFSVAADGRYYLAVGIARDLQLNPRISQGGYLDI 103
Query: 1067 FHYDD--GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
+ D L+ + EI ++C F G+LLA +R+++ +K LR E H
Sbjct: 104 YKIDPTCSSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIP 163
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I + ++ G + V D+ S+ L+Y+ E + D +P W+T+ +LD +
Sbjct: 164 YQI-VNIQAMGHRVYVSDVQESVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAI 222
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLV 1222
A+ NL I + + T D D GT L GL+
Sbjct: 223 ADKFGNLSIQRLPHSVTDDVDE---DPTGTKSLWDRGLL 258
>gi|358415280|ref|XP_003583063.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
[Bos taurus]
Length = 1490
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1167 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1225
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1226 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1284
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1285 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1327
Score = 43.5 bits (101), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-------------------S 225
++V CSG K G+L +++ I + +LPG +W +
Sbjct: 547 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEQEETLKGEGTEPE 606
Query: 226 IGSPKNLDNT-----LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
G+P+ D+ L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 607 PGAPEAEDDGRRHGFLILSREDSTMILQ-TGQEIMELDASGFATQGPTVFAGNIGDNRYI 665
Query: 280 LQVTP 284
+QV+P
Sbjct: 666 VQVSP 670
Score = 41.6 bits (96), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 192 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 251
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q G+ + ISL ++ W ++
Sbjct: 252 IVDLQFLHGYYEPTLLILFEPNQTWPGKVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 311
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 312 FDCTQALAVPKPIGGVVIFAVNSLLY 337
>gi|403302917|ref|XP_003942095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
[Saimiri boliviensis boliviensis]
Length = 1390
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1067 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1125
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1126 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1184
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1185 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1227
Score = 43.5 bits (101), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-------------------S 225
++V CSG K G+L +++ I + +LPG +W +
Sbjct: 447 EIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEENPKGEGTEQE 506
Query: 226 IGSPKNLDNT-----LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
+P+ D++ L+LS T +L +G E+ E + GF + T + GNV D R +
Sbjct: 507 PSTPEADDDSRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNVGDDRYI 565
Query: 280 LQVTP 284
+QV+P
Sbjct: 566 VQVSP 570
>gi|402879380|ref|XP_003903320.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 1 [Papio anubis]
Length = 1389
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1066 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1124
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1125 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1183
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1184 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1226
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-------------------S 225
++V CSG K G+L +++ I + +LPG +W +
Sbjct: 446 EIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQE 505
Query: 226 IGSPKNLDNT-----LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
SP+ D+ L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 506 ARSPEADDDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 564
Query: 280 LQVTP 284
+QV+P
Sbjct: 565 VQVSP 569
>gi|345779232|ref|XP_532356.3| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
[Canis lupus familiaris]
Length = 1460
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1137 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1195
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1196 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1254
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1255 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1297
Score = 42.0 bits (97), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEE--------------------LE 823
+DP+ R + +Y ++P +++ + + E L
Sbjct: 162 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRGLDEKLLN 221
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 222 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 281
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 282 FDCTQALAVPKPIGGVVVFAVNSLLY 307
Score = 42.0 bits (97), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 517 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEQEETSKGEVAEQE 576
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 577 SSALEAEDDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 635
Query: 280 LQVTP 284
+QV+P
Sbjct: 636 VQVSP 640
>gi|398407593|ref|XP_003855262.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
gi|339475146|gb|EGP90238.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
Length = 1218
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
Query: 1017 ILHAHQLFPGEYALSLISSKFGEDPNTYFV-LGTAV-VHPEENEPKQGRIIIFHY--DDG 1072
+ H +L E AL + F + F+ +GT + P ++P G + I+ +
Sbjct: 877 VTHTIELGENEAALCIACVPFTSRQDEVFLAVGTGQHMSPGTSQPSTGFVHIYRLLEEGT 936
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLK 1131
KL+ + + Y++C+FNG+L + + + +++ + LR + N+I
Sbjct: 937 KLEFVHRTQFDSPIYALCKFNGRLALGVGNELFIYDMGMKHLLRKARGTAVPNLITHITS 996
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
V G+ ++ D+ S+T + YK D W T+ ++D E GA+ NL+
Sbjct: 997 V-GNRLICADVSESVTYVVYKPAFNRLIPFVDDTIQRWTTATALVDYETVAGADKFGNLW 1055
Query: 1192 I--CQKDSAATSDED 1204
+ C + ++ +DED
Sbjct: 1056 VVRCPEATSTEADED 1070
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 136/332 (40%), Gaps = 33/332 (9%)
Query: 167 LAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEE---HACIDLPGIKGIWA 223
L P+I V +L + Q+ G + + IR+G+ +EE ++ ++P IW
Sbjct: 428 LHPLIKTKVDNLTSEDAPQIYAIQGTGNKSQFKTIRHGLNVEEIINNSMGNVP-YDNIWT 486
Query: 224 LSIGSPKNLDNTLVLSF-VGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQV 282
S L+LS G + G VE+ E F ++ T + + T++QV
Sbjct: 487 FKHRSTDEFHRYLLLSSSYGDLTIACSIGDSVEQIENSSFLENRATVHAQQMGDATLVQV 546
Query: 283 TPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCD---VYYLEVHGSEIKQ 339
A + S ++ W P +++ V S N+ Q+L A ++++ G ++
Sbjct: 547 --HARGIRSILESGALNEWPTPAHRTVVVASANERQLLLALSSAELAFFFMQDDGILVQL 604
Query: 340 LAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP--------SLE 391
+ +V L + T +A+ A VG D + R+LS+ S++
Sbjct: 605 EEMPEMSGKVTALSVG-----RTPKGRQQAKYAVVGC-DDCTIRVLSIELDSPLEPRSVQ 658
Query: 392 EVCKEPLGGEIIPRSILMTCFEGHCYL-LVALGDGSMFYFS--LDPASGRLTDKKKVTLG 448
+ P E++ M + Y+ +V +G S Y +D +G L D + LG
Sbjct: 659 ALSAVPTSLEVVE----MHDPSSNSYVNVVHIGLQSGLYLRAVIDETTGELGDVRTKFLG 714
Query: 449 TQPTVLKTFRSLSTTNVFACSDRPTVIYSSNH 480
T+P L V ACS RP + Y NH
Sbjct: 715 TRPPRLCPVEINDQECVLACSSRPWLGY--NH 744
>gi|410042329|ref|XP_003954555.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 1 [Pan troglodytes]
Length = 1296
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 973 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1031
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1032 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1090
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1091 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1133
Score = 42.4 bits (98), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVVFAVNSLLY 288
>gi|119602512|gb|EAW82106.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform CRA_a
[Homo sapiens]
gi|119602513|gb|EAW82107.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform CRA_a
[Homo sapiens]
gi|119602514|gb|EAW82108.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform CRA_a
[Homo sapiens]
Length = 1365
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1042 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1100
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1101 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1159
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1160 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1202
Score = 42.0 bits (97), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 65 VDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 124
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 125 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 184
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 185 FDCTQALAVPKPIGGVVVFAVNSLLY 210
>gi|68476233|ref|XP_717766.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|68476422|ref|XP_717672.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|74586274|sp|Q5A7S5.1|RSE1_CANAL RecName: Full=Pre-mRNA-splicing factor RSE1
gi|46439394|gb|EAK98712.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|46439495|gb|EAK98812.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
Length = 1219
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 142/335 (42%), Gaps = 32/335 (9%)
Query: 153 ENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+N + V+E+ L+PI D ++D +LVT S ++ I +G+
Sbjct: 428 DNLALIDVLET---LSPITDSKIID------SKLVTLSS---HSYVKSITHGVPTTTLVE 475
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFY 270
LP I+ + D LV+S ++ L LS G VE+ E F DQ T
Sbjct: 476 SPLPITPTDIFTTKLSLESANDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQPTIA 535
Query: 271 CGNVDPRTVLQVTPSAAILIST-ESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVY 328
V +V+Q+ + + T + + W PP G +I+ + N QVL A + V
Sbjct: 536 VQQVGIASVVQIYSNGIKHVRTVNGNKKTTDWFPPAGITITHATTNNQQVLIALSNLSVV 595
Query: 329 YLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP 388
Y E+ ++ QL E+A I+ ++ +E SE K+ A +G +D + +++SL
Sbjct: 596 YFEIDATD-DQLIEYQDRLEIATT-ITAMAIQENISE--KSPFAIIGC-SDETIQVVSLQ 650
Query: 389 SLEEVCKEPLGGEIIPRSILMTCF------EGHCYLLVALGDGSMFYFSLDPASGRLTDK 442
E C E + + + E H + + + +G +D +G L++
Sbjct: 651 --EHNCLEIKSLQALSANSSSLKMLKSSGKETHVH--IGMENGVYARIKIDTINGNLSNS 706
Query: 443 KKVTLGTQPTVLKTFR-SLSTTNVFACSDRPTVIY 476
+ +G++P L + S + A S P + Y
Sbjct: 707 RVKYIGSKPVSLSVIKFSNEIEGILAISSAPWISY 741
>gi|410987992|ref|XP_004000273.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
[Felis catus]
Length = 1432
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1109 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1167
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1168 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1226
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1227 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1269
Score = 42.0 bits (97), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEE--------------------LE 823
+DP+ R + +Y ++P +++ + + E L
Sbjct: 134 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRGLDEKLLN 193
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 194 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 253
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 254 FDCTQALAVPKPIGGVVVFAVNSLLY 279
Score = 41.6 bits (96), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 489 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEQEETSKGEGAEQE 548
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 549 PSTLEAEDDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 607
Query: 280 LQVTP 284
+QV+P
Sbjct: 608 VQVSP 612
>gi|426361048|ref|XP_004047737.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
[Gorilla gorilla gorilla]
Length = 1440
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1117 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1175
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1176 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1234
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1235 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1277
>gi|444523674|gb|ELV13604.1| Cleavage and polyadenylation specificity factor subunit 1 [Tupaia
chinensis]
Length = 1469
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1146 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1204
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1205 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1263
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1264 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1306
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K+ + T
Sbjct: 527 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKDEEETPKAEGTEQP 586
Query: 236 --------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTVL 280
L+LS T +L +G E+ E + GF + T + GN+ D R ++
Sbjct: 587 RAAEAEDGVRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYIV 645
Query: 281 QVTP 284
QV+P
Sbjct: 646 QVSP 649
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL + W ++
Sbjct: 203 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQRVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVVFAVNSLLY 288
>gi|355698297|gb|EHH28845.1| Cleavage and polyadenylation specificity factor 160 kDa subunit
[Macaca mulatta]
Length = 1436
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1113 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1171
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1172 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1230
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1231 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1273
Score = 42.0 bits (97), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVVFAVNSLLY 288
>gi|328771718|gb|EGF81757.1| hypothetical protein BATDEDRAFT_34564 [Batrachochytrium
dendrobatidis JAM81]
Length = 1248
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 152/395 (38%), Gaps = 51/395 (12%)
Query: 166 NLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIE-EHACIDLPGIKGIWAL 224
N P +D + D L +G G ++ IR+G+G+ + G +W L
Sbjct: 439 NAGPTLDFCLADTLGNNTDTLYMTAGAAPLGYIQEIRHGVGVLIDDTTKQFDGAIKLWGL 498
Query: 225 SIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEE-TEMGGFTSDQQT------FYCGNVDPR 277
+D+ LV SFV TR++ + E E+ +++ GFT D T F G
Sbjct: 499 RTSCEDTVDSLLVASFVASTRIMYMQDDEFEDISDISGFTIDVATLNTAACFVSGYFIQV 558
Query: 278 TVLQVTPSAAILIST-ESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSE 336
+ + + +L T + ++W PPN + + ++ VL L + G E
Sbjct: 559 HLHGIIIARPLLDKTINNNTCTANWSPPNDHKVGFSAFYQDCVL---------LTLTG-E 608
Query: 337 IKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKE 396
+ + + E + + I +S+ EP+ + +++P + K
Sbjct: 609 NSLMLLKVIIQENSNVQIESISSISLDIEPSSQYYSTP----------INVPHSICIIK- 657
Query: 397 PLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKT 456
EI RS +LL+ + DG++ F+LD + ++ V L L
Sbjct: 658 --SKEISSRS---NALISKPHLLIGIRDGALLDFTLDFENDQINFMPPVILQLGDCPLDL 712
Query: 457 FRSLSTTNVFACSDRPTVIYSSNHKLVFS-----NVNLRQVNHMCSLNAESY------PD 505
S T + DR V+ +N S + + Q+ H L+A +
Sbjct: 713 VYSHHTDPL----DR-YVLGVTNQTWQLSVSPIGGIRISQLLHKPILHAARFLYDADVDT 767
Query: 506 SLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRI 540
T T +F +D HIR + +G+ PRRI
Sbjct: 768 GFLFLTSDTLSFVKVDPESGYHIRNINMGDTPRRI 802
>gi|301773406|ref|XP_002922132.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 1-like [Ailuropoda
melanoleuca]
Length = 1469
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1163 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1221
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1222 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1280
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1281 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1323
Score = 42.0 bits (97), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 536 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEQEETPKGEGAEQE 595
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 596 PSALEADDDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDSRYI 654
Query: 280 LQVTP 284
+QV+P
Sbjct: 655 VQVSP 659
Score = 42.0 bits (97), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEE--------------------LE 823
+DP+ R + +Y ++P +++ + + E L
Sbjct: 181 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRGLDEKLLN 240
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 241 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 300
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 301 FDCTQALAVPKPIGGVVVFAVNSLLY 326
>gi|354491126|ref|XP_003507707.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
isoform 3 [Cricetulus griseus]
Length = 1449
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1118 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1176
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1177 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1235
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1236 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1278
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVIFAVNSLLY 288
>gi|320169222|gb|EFW46121.1| cleavage and polyadenylation specificity factor 1 [Capsaspora
owczarzaki ATCC 30864]
Length = 1725
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 28/219 (12%)
Query: 995 PADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSL-ISSKFGEDPNT----YFVLGT 1049
PA F + +L +I T+E +H+ L E S+ I++ ++ T Y V+GT
Sbjct: 1354 PATF----DTFSLQLISPVTWESIHSFDLPAFERVTSVDIAAITSQETVTGLKDYVVIGT 1409
Query: 1050 AVVHPEENEPKQGRIIIFHYDD-----------GKLQQIAEKEIKGACYSMCEFNGKLLA 1098
V+ E+ GRII+F D KL+ + E+E KGA ++ G L++
Sbjct: 1410 TVIEGEDVT-CHGRIIVFEIIDVVPEVNRPQTNRKLKYLMEREQKGAITALSHVCGHLVS 1468
Query: 1099 SINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKG--DFILVGDLMRSLTLLQYKTMEG 1156
I + ++++ ++ + + F + + V +FILVGDL S+ LL++
Sbjct: 1469 CIGQKIIIWQFASDDTM--DGVAFIDTQTFVVSVSAIKNFILVGDLNNSVFLLRFNETTK 1526
Query: 1157 SFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
I+RD++ + S + L D FL ++ NL +
Sbjct: 1527 HLGFIARDFDHMSVASTQFLVDGSSLGFLATDSHQNLVV 1565
>gi|355680843|gb|AER96659.1| cleavage and polyadenylation specific factor 1, 160kDa [Mustela
putorius furo]
Length = 1399
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1077 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1135
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1136 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1194
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1195 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1237
Score = 43.1 bits (100), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + + K + T
Sbjct: 457 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPARKEQEETPKGDGAEQE 516
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 517 PSALEADDDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDGRYI 575
Query: 280 LQVTP 284
+QV+P
Sbjct: 576 VQVSP 580
>gi|384946686|gb|AFI36948.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
mulatta]
Length = 1428
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1119 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1177
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1178 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1236
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1237 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1279
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-------------------S 225
++V CSG K G+L +++ I + +LPG +W +
Sbjct: 499 EIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQE 558
Query: 226 IGSPKNLDNT-----LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
SP+ D+ L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 559 ARSPEADDDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 617
Query: 280 LQVTP 284
+QV+P
Sbjct: 618 VQVSP 622
Score = 42.0 bits (97), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVVFAVNSLLY 288
>gi|348555854|ref|XP_003463738.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
isoform 1 [Cavia porcellus]
Length = 1440
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1117 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1175
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1176 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1234
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1235 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1277
Score = 43.1 bits (100), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 142 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 201
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 202 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 261
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 262 FDCTQALAVPKPIGGVVIFAVNSLLY 287
Score = 41.6 bits (96), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 497 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEETPKAEGSEQE 556
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 557 PSAPEAEDDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 615
Query: 280 LQVTP 284
+QV+P
Sbjct: 616 VQVSP 620
>gi|308805673|ref|XP_003080148.1| cleavage and polyadenylation specificity factor (ISS) [Ostreococcus
tauri]
gi|116058608|emb|CAL54315.1| cleavage and polyadenylation specificity factor (ISS), partial
[Ostreococcus tauri]
Length = 1473
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 25/224 (11%)
Query: 987 TKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNT--- 1043
+K A +ME++ L++ + + + H L PGE+ + + + +D NT
Sbjct: 826 SKARRERAKAHDDMELQYSVRLLV-PGSLDCVWQHTLEPGEHVQCVRNVQL-KDINTGHS 883
Query: 1044 --YFVLGTAVVHPEENEPKQGRIIIFHY--------DDG---KLQQIAEKEIKGACYSMC 1090
Y +GTA+ E+ P +GR+ +F+ DG K Q +E K AC ++
Sbjct: 884 LSYLAVGTAMPGGEDT-PCRGRVYLFNMVWERDSESADGYRWKGQVCCVREAKMACTALE 942
Query: 1091 EFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQ 1150
G L+ ++ + + + W + +EL I + + V +FILVGDL + L +
Sbjct: 943 GLGGHLIVAVGTKLTVHTW-DGRELNSVAFFDTPIHTVSINVVKNFILVGDLEKGLHFFR 1001
Query: 1151 YKT--MEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYN 1189
+K E S ++S+D+ + S E L D LG++ S N
Sbjct: 1002 WKDTGFEKSLIQLSKDFERMDVVSSEFLIDGTTLSLLGSDMSGN 1045
>gi|395740218|ref|XP_002819588.2| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
[Pongo abelii]
Length = 1388
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1065 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1123
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1124 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1182
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1183 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1225
>gi|16751835|ref|NP_444423.1| cleavage and polyadenylation specificity factor subunit 1 isoform 2
[Mus musculus]
gi|17374611|sp|Q9EPU4.1|CPSF1_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor subunit
1; AltName: Full=Cleavage and polyadenylation specificity
factor 160 kDa subunit; Short=CPSF 160 kDa subunit
gi|11762096|gb|AAG40326.1|AF322193_1 cleavage and polyadenylation specificity factor 1 [Mus musculus]
gi|38614159|gb|AAH56388.1| Cleavage and polyadenylation specific factor 1 [Mus musculus]
Length = 1441
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1118 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1176
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1177 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1235
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1236 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1278
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVIFAVNSLLY 288
Score = 41.6 bits (96), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 498 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEETPKAESTEQE 557
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 558 PSAPKAEEDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 616
Query: 280 LQVTP 284
+QV+P
Sbjct: 617 VQVSP 621
>gi|197245729|gb|AAI68713.1| Cpsf1 protein [Rattus norvegicus]
Length = 1439
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1116 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1174
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1175 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1233
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1234 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1276
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVIFAVNSLLY 288
Score = 42.0 bits (97), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 496 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEETPKAESTEQE 555
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 556 PSAPKAEEDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 614
Query: 280 LQVTP 284
+QV+P
Sbjct: 615 VQVSP 619
>gi|156086042|ref|XP_001610430.1| hypothetical protein [Babesia bovis T2Bo]
gi|154797683|gb|EDO06862.1| conserved hypothetical protein [Babesia bovis]
Length = 1450
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 97/238 (40%), Gaps = 35/238 (14%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRII---I 1066
I T E++H + S+ + KF + P T LG++++ ++ P QG I +
Sbjct: 1024 IHLGTKEVVHTLNMPQRHVITSMCTVKF-DGPKTLIALGSSLIQDKDGVPSQGYIFLVDV 1082
Query: 1067 FHYDDGKLQQIAEKE---IKGACYSMCEFNGKLLASINSTVRLFEWTNE---------KE 1114
D K + + I M +L+ ++N TV + +
Sbjct: 1083 IKSDAHKWNVVFLRTLNFIDKGVTQMTPCINQLVVALNETVAVLSLVRGADPEPSDTLRS 1142
Query: 1115 LRLECSHFNN-----------------IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS 1157
++E H ++ + L D I++GDLM S+ +LQ++ E
Sbjct: 1143 YKMEVLHESDESYGQYTLVTRAEYKSCSYVVSLDAYQDVIVIGDLMNSMRMLQWQGTE-- 1200
Query: 1158 FEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVH 1215
E+ +D+N + T+ +D + A++S N ++ K T+D + ++VG H
Sbjct: 1201 LREVCKDFNSVYCTAAAAIDQTSCVVADSSGNFYVFAKRQVVTNDAEAIKAEDVGLFH 1258
>gi|392306997|ref|NP_001254722.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
mulatta]
gi|380812168|gb|AFE77959.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
mulatta]
gi|383417835|gb|AFH32131.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
mulatta]
Length = 1442
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1119 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1177
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1178 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1236
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1237 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1279
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-------------------S 225
++V CSG K G+L +++ I + +LPG +W +
Sbjct: 499 EIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQE 558
Query: 226 IGSPKNLDNT-----LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
SP+ D+ L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 559 ARSPEADDDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 617
Query: 280 LQVTP 284
+QV+P
Sbjct: 618 VQVSP 622
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVVFAVNSLLY 288
>gi|255918233|ref|NP_001157645.1| cleavage and polyadenylation specificity factor subunit 1 isoform 1
[Mus musculus]
Length = 1450
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1118 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1176
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1177 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1235
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1236 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1278
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVIFAVNSLLY 288
Score = 41.6 bits (96), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 498 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEETPKAESTEQE 557
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 558 PSAPKAEEDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 616
Query: 280 LQVTP 284
+QV+P
Sbjct: 617 VQVSP 621
>gi|1045574|gb|AAC50293.1| cleavage and polyadenylation specificity factor [Homo sapiens]
Length = 1442
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1120 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1178
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1179 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1237
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1238 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1280
Score = 42.0 bits (97), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVVFAVNSLLY 288
>gi|354491122|ref|XP_003507705.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
isoform 1 [Cricetulus griseus]
Length = 1441
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1118 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1176
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1177 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1235
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1236 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1278
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVIFAVNSLLY 288
>gi|338728513|ref|XP_003365689.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Equus caballus]
Length = 1450
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1127 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1185
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1186 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1244
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1245 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1287
Score = 42.4 bits (98), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 146 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLN 205
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 206 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 265
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 266 FDCTQALAVPKPIGGVVVFAVNSLLY 291
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 507 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEQEETPKGEGTEQE 566
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 567 PSAPEADDDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 625
Query: 280 LQVTP 284
+QV+P
Sbjct: 626 VQVSP 630
>gi|56676371|ref|NP_037423.2| cleavage and polyadenylation specificity factor subunit 1 [Homo
sapiens]
gi|23503048|sp|Q10570.2|CPSF1_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor subunit
1; AltName: Full=Cleavage and polyadenylation specificity
factor 160 kDa subunit; Short=CPSF 160 kDa subunit
gi|16878041|gb|AAH17232.1| Cleavage and polyadenylation specific factor 1, 160kDa [Homo sapiens]
gi|119602516|gb|EAW82110.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform CRA_c
[Homo sapiens]
gi|123993607|gb|ABM84405.1| cleavage and polyadenylation specific factor 1, 160kDa [synthetic
construct]
gi|123999626|gb|ABM87355.1| cleavage and polyadenylation specific factor 1, 160kDa [synthetic
construct]
gi|307684758|dbj|BAJ20419.1| cleavage and polyadenylation specific factor 1, 160kDa [synthetic
construct]
Length = 1443
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1120 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1178
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1179 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1237
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1238 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1280
Score = 42.0 bits (97), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVVFAVNSLLY 288
>gi|397497327|ref|XP_003819464.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
[Pan paniscus]
gi|410336497|gb|JAA37195.1| cleavage and polyadenylation specific factor 1, 160kDa [Pan
troglodytes]
Length = 1442
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1119 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1177
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1178 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1236
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1237 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1279
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVVFAVNSLLY 288
>gi|395512730|ref|XP_003760588.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
[Sarcophilus harrisii]
Length = 1449
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1126 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1184
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1185 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1243
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1244 EESKTLSLVSRDAKPLEVYSVDFMVDSAQLGFLVSDRDRNLMV 1286
Score = 45.1 bits (105), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K D T
Sbjct: 506 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPLRKEEDETTKGEGPEQE 565
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T Y GN+ D R +
Sbjct: 566 PSSPETEDDGKRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVYAGNIGDNRYI 624
Query: 280 LQVTP 284
+QV+P
Sbjct: 625 VQVSP 629
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 146 VDPDGRCAVMLIYGTRLVVLPFRRESLAEEHEGLVGEGQKSSFLPSYIIDVRALDEKLLN 205
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W N+
Sbjct: 206 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNILQKVHPVIWSLTNLP 265
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 266 FDCTQALAVPKPIGGVVIFAVNSLLY 291
>gi|344236599|gb|EGV92702.1| Cleavage and polyadenylation specificity factor subunit 1 [Cricetulus
griseus]
Length = 1419
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1096 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1154
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1155 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1213
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1214 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1256
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVIFAVNSLLY 288
>gi|440904368|gb|ELR54893.1| Cleavage and polyadenylation specificity factor subunit 1, partial
[Bos grunniens mutus]
Length = 1417
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1111 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1169
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1170 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1228
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1229 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1271
Score = 43.9 bits (102), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-------------------S 225
++V CSG K G+L +++ I + +LPG +W +
Sbjct: 491 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEQEETLKGEGTEPE 550
Query: 226 IGSPKNLDNT-----LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
G+P+ D+ L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 551 PGAPEAEDDGRRHGFLILSREDSTMILQ-TGQEIMELDASGFATQGPTVFAGNIGDNRYI 609
Query: 280 LQVTP 284
+QV+P
Sbjct: 610 VQVSP 614
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 136 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 195
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 196 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 255
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 256 FDCTQALAVPKPIGGVVIFAVNSLLY 281
>gi|338728511|ref|XP_001505047.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform 1 [Equus caballus]
Length = 1444
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1121 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1179
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1180 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1238
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1239 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1281
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 146 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLN 205
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 206 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 265
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 266 FDCTQALAVPKPIGGVVVFAVNSLLY 291
Score = 42.0 bits (97), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 501 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEQEETPKGEGTEQE 560
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 561 PSAPEADDDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 619
Query: 280 LQVTP 284
+QV+P
Sbjct: 620 VQVSP 624
>gi|431908146|gb|ELK11749.1| Cleavage and polyadenylation specificity factor subunit 1 [Pteropus
alecto]
Length = 820
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 497 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 555
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 556 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 614
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 615 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 657
>gi|395860104|ref|XP_003802355.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
[Otolemur garnettii]
Length = 1441
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1118 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1176
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1177 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1235
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1236 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1278
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVIFAVNSLLY 288
Score = 42.4 bits (98), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 498 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIASVRKEEEETPKGEGTEQE 557
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 558 SGVPEGEEDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 616
Query: 280 LQVTP 284
+QV+P
Sbjct: 617 VQVSP 621
>gi|334326317|ref|XP_001364707.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Monodelphis domestica]
Length = 1449
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1126 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1184
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1185 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1243
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1244 EESKTLSLVSRDAKPLEVYSVDFMVDSAQLGFLVSDRDRNLMV 1286
Score = 45.1 bits (105), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K D T
Sbjct: 506 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPLRKEEDETTKGEGAEQE 565
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T Y GN+ D R +
Sbjct: 566 PSSPETEDDGKRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVYAGNIGDNRYI 624
Query: 280 LQVTP 284
+QV+P
Sbjct: 625 VQVSP 629
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 146 VDPDGRCAVMLIYGTRLVVLPFRRESLAEEHEGLVGEGQKSSFLPSYIIDVRALDEKLLN 205
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W N+
Sbjct: 206 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNILQKVHPVIWSLTNLP 265
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 266 FDCTQALAVPKPIGGVVIFAVNSLLY 291
>gi|27807297|ref|NP_777145.1| cleavage and polyadenylation specificity factor subunit 1 [Bos
taurus]
gi|1706101|sp|Q10569.1|CPSF1_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor subunit
1; AltName: Full=Cleavage and polyadenylation specificity
factor 160 kDa subunit; Short=CPSF 160 kDa subunit
gi|929007|emb|CAA58152.1| cleavage and polyadenylation specificity factor, 160 kDa subunit [Bos
taurus]
gi|296480730|tpg|DAA22845.1| TPA: cleavage and polyadenylation specificity factor subunit 1 [Bos
taurus]
Length = 1444
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1121 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1179
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1180 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1238
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1239 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1281
Score = 43.9 bits (102), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-------------------S 225
++V CSG K G+L +++ I + +LPG +W +
Sbjct: 501 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEQEETLKGEGTEPE 560
Query: 226 IGSPKNLDNT-----LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
G+P+ D+ L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 561 PGAPEAEDDGRRHGFLILSREDSTMILQ-TGQEIMELDASGFATQGPTVFAGNIGDNRYI 619
Query: 280 LQVTP 284
+QV+P
Sbjct: 620 VQVSP 624
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 146 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 205
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 206 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 265
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 266 FDCTQALAVPKPIGGVVIFAVNSLLY 291
>gi|448528339|ref|XP_003869702.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis Co 90-125]
gi|380354055|emb|CCG23569.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis]
Length = 1170
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 141/334 (42%), Gaps = 36/334 (10%)
Query: 153 ENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+N + V+ES L+PI D ++ D LVT S K L+ I +G
Sbjct: 396 DNLALIDVVES---LSPITDSILND------DTLVTLSTKSK---LKTIVHGTPTTTLVE 443
Query: 213 IDLPGIKGIWALSIGSPKNL--DNTLVLSFVGHTRVLTLSGAEV-EETEMGGFTSDQQTF 269
LP IK + + N D LV++ + L LS EV EE F DQ T
Sbjct: 444 SQLP-IKPTNIFTTKTSANAVDDEYLVITSTLSFKTLVLSLGEVIEEVNDSEFVLDQPTV 502
Query: 270 YCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV-LCATGCDVY 328
V +++Q+ + L +V++W PP G +++ + N QV L + ++
Sbjct: 503 AVQQVGKSSIVQIYSNG--LRHINGNKKVTNWYPPAGITVTHATTNNQQVFLGLSNLELV 560
Query: 329 YLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP 388
Y E + QL EV+ SP+ + S E ++ A VG S +S+
Sbjct: 561 YFETDPDD-DQLREYQDRLEVS----SPIRSMCISKE--QSSFAVVG----CSDETISVI 609
Query: 389 SLE-EVCKEPLGGEIIPRS----ILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKK 443
SL+ + C + + + S I++T G + + + +G +D +G+L+D +
Sbjct: 610 SLQRQNCLQVKSLQALSSSANSLIMLTHKPGTTLIHIGMDNGVYVRTKIDTFNGKLSDTR 669
Query: 444 KVTLGTQPTVLKTFR-SLSTTNVFACSDRPTVIY 476
LG +P L + S V A S +P + Y
Sbjct: 670 IKYLGPKPVTLNELKLSDDIIGVLAISSKPWIGY 703
Score = 43.9 bits (102), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 1016 EILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGK-L 1074
EI + + + +I +F + N Y V+G V E+N + F D K L
Sbjct: 835 EIKQTLEFVKNQRIVDMIKIQFNK--NLYLVVG--VTKHEDN-----LLYTFKIDKKKNL 885
Query: 1075 QQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVK- 1133
Q I + E+K +M F +LL + +++ L+E + LR + + I +KV
Sbjct: 886 QYIHKTELKYVPQTMEVFQDRLLVASGNSISLYELGQRQLLRKSLTRI-DFIQTIVKVTP 944
Query: 1134 --GDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
D IL+ D S+ ++ E F ++ D +T+ + LD + +G + N+F
Sbjct: 945 QPRDRILLADSANSIVFAKFDQEENQFVSMADDTVKRNITAWKQLDYDTVIGGDKFGNIF 1004
Query: 1192 ICQKDSAATS--DEDRTHLQEVG 1212
+ + D + D++ T L++
Sbjct: 1005 VSRLDREESKQIDQNWTVLKQAA 1027
>gi|417406474|gb|JAA49895.1| Putative mrna cleavage and polyadenylation factor ii complex subunit
cft1 cpsf subunit [Desmodus rotundus]
Length = 1444
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1121 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1179
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1180 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1238
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1239 EDSKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1281
Score = 43.1 bits (100), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 146 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLN 205
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 206 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 265
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 266 FDCTQALAVPKPIGGVVIFAVNSLLY 291
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 501 EIVLCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVVAPVRKEQEETPKGEGTEQE 560
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 561 PITPETEDDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 619
Query: 280 LQVTP 284
+QV+P
Sbjct: 620 VQVSP 624
>gi|343962533|dbj|BAK62854.1| cleavage and polyadenylation specificity factor 160 kDa subunit [Pan
troglodytes]
Length = 269
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 71 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 129
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 130 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 188
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 189 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 231
>gi|296227035|ref|XP_002807684.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 1 [Callithrix jacchus]
Length = 1394
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFHYDD-----------GKLQQIAEKEIKGACYSMCEF 1092
Y GT ++ EE + GRI+I + K + + EKE KG ++C
Sbjct: 1071 YVAAGTCLMQGEEVTCR-GRILIMDVIEVVTEPRQTLTXXKFKVLYEKEQKGPVTALCHC 1129
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1130 NGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1188
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + S++ + D FL ++ NL +
Sbjct: 1189 EESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMV 1231
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVIFAVNSLLY 288
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-------------------S 225
++V CSG K G+L +++ I + +LPG +W +
Sbjct: 451 EIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEENPKGEGTEQE 510
Query: 226 IGSPKNLDNT-----LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
+P+ D++ L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 511 PSTPEADDDSRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 569
Query: 280 LQVTP 284
+QV+P
Sbjct: 570 VQVSP 574
>gi|327287424|ref|XP_003228429.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Anolis carolinensis]
Length = 1294
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y +GT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1074 YIAVGTCLMQGEEVTCR-GRILIMDIIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1132
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
NG L+++I + L+ + + I + VK +FIL D+M+S++LL+Y+
Sbjct: 1133 NGYLVSAIGQKIFLWSLKDNDLTGMAFIDTQLYIHQMISVK-NFILAADVMKSISLLRYQ 1191
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + ++ + D FL ++ NL +
Sbjct: 1192 EESKTLSLVSRDAKPLEVYCVDFMVDSCQLGFLVSDRDRNLLV 1234
Score = 43.5 bits (101), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDNFE---------------LKASSIRMEELE----- 823
+DP+ R + +Y ++P +D L + I + EL+
Sbjct: 143 VDPDGRCAVMLIYGTRLVVLPFRRDTLTDEHEGVVGEGQKSSFLPSYIIDIRELDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFL+G PT++ + +Q GR + ISL ++ W N+
Sbjct: 203 IIDMQFLYGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHPVIWSLSNLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVIFAVNSLLY 288
>gi|448111975|ref|XP_004201977.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
gi|359464966|emb|CCE88671.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
Length = 1249
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 152/373 (40%), Gaps = 40/373 (10%)
Query: 153 ENGTYVSVMESFTNLAPIIDMVVVDLERQGQG-----QLVTCSGGFKEGSLRIIRNGIGI 207
EN V VM+S L P+ D +++ R + LVT S F ++I+ +G+ +
Sbjct: 402 ENLALVDVMDS---LNPVTDATLLE-TRMSESPDPLINLVTLSSRF----IKILTHGMPV 453
Query: 208 EEHACIDLPGIKGIWALSIGSPKNL-----DNTLVLSFVGHTRVLTLS-GAEVEETEMGG 261
+ LP I I + K D+ LV+S ++ L LS G VEE
Sbjct: 454 NQLVTSPLP----IHPSLIFTTKKFNESVNDDYLVISSELSSQTLVLSIGEVVEEVSDSE 509
Query: 262 FTSDQQTFYCGNVDPRTVLQVTPSAAILI-----STESKARVSSWEPPNGKSISVVSCNK 316
F ++Q T + +++QV + I E + + W PP G S+ S N
Sbjct: 510 FVTNQPTIHVQQTGKSSIVQVFSNGIRSIRHIKNGDEEIKKTTDWYPPAGISVIKASGNN 569
Query: 317 NQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVG 375
Q++ + +V Y E+ ++ QL EV+ +S +P K A+
Sbjct: 570 TQLIIGMSNREVCYFEIDSAD-DQLIEYQERLEVSG-GSISSLAILSSKDPEKRSSHAII 627
Query: 376 LWTDISARLLSLPS---LEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSL 432
+D + +++SL L V + L + SILM Y+ + + +G +
Sbjct: 628 GSSDETIQVVSLKRHNCLSIVALQALSSK--STSILMINHNDSVYVHIGMENGLYVRTMI 685
Query: 433 DPASGRLTDKKKVTLGTQPTVLKTFR----SLSTTNVFACSDRPTVIYSSNHKLVFSNVN 488
D SG+L+D + LG++ L + S + A S RP Y + + S +
Sbjct: 686 DEVSGKLSDTRIKFLGSKSVRLSPIKVPGNSGEENGILALSSRPWYGYFAEGRFKLSPLI 745
Query: 489 LRQVNHMCSLNAE 501
+ H S AE
Sbjct: 746 NCSLTHGTSFYAE 758
Score = 49.3 bits (116), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 1077 IAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECS---HFNNIIALFLKVK 1133
I + E + A +M EFN +LL + +RL++ +++ LR S +F NII L +
Sbjct: 959 IHKTESEFAPLAMIEFNNRLLIGTKNLLRLYDIGHKQLLRKASSSIDYFENIIKLAY-MG 1017
Query: 1134 GDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFIC 1193
G+ I+ D S T ++Y +E F ++ D +TS+ LD + +G + N+F+
Sbjct: 1018 GNRIMAADASMSSTFVKYDQVENQFFPLADDVMKRKITSMCPLDYDTIVGGDKFGNVFVS 1077
Query: 1194 Q 1194
+
Sbjct: 1078 R 1078
>gi|344234015|gb|EGV65885.1| hypothetical protein CANTEDRAFT_133308 [Candida tenuis ATCC 10573]
Length = 1191
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R LL + G ++L + +K F V LG ++P + ++ + V FV S+L
Sbjct: 313 RILLVNNRGETYLLFFDSVKKSKSLFQVNSISFVKLGPTTVPINVLHITDNVFFVASKLS 372
Query: 141 DSQLVK-LNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
S L K L + P Y+ + + ++ P++D+ V + Q +L TC GG++ G R
Sbjct: 373 QSVLFKILTKEP-----YIDICQFVSSSPPVLDIQVQN--NGNQIELFTCQGGYESGEYR 425
Query: 200 IIRNGIG 206
I N +
Sbjct: 426 RISNRLS 432
>gi|17861814|gb|AAL39384.1| GM01240p [Drosophila melanogaster]
gi|220943184|gb|ACL84135.1| CG13900-PB [synthetic construct]
Length = 688
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 15/219 (6%)
Query: 1015 FEILHAHQLFP-----GEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPK--QGRIIIF 1067
+ +H +F E +S+ KF + + L + + P+ QG I
Sbjct: 339 LDAMHGQTMFSVPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDI 398
Query: 1068 HYDD---GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123
+ D L+ + +I ++C F G+LLA +R++++ +K LR E H
Sbjct: 399 YKIDPTCSSLEFMHRTDIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIP 458
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
I + ++ G + V D+ S+ ++Y+ E + D +P W+T+ +LD +
Sbjct: 459 YQI-VNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAI 517
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLV 1222
A+ NL I + + T D D GT L GL+
Sbjct: 518 ADKFGNLSIQRLPHSVTDDVDE---DPTGTKSLWDRGLL 553
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 91/239 (38%), Gaps = 36/239 (15%)
Query: 328 YYLEVHGSEIKQLAHRA-LEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLS 386
Y L + E+ + R+ + E+ C+ + + E ++ AVGL D + R+LS
Sbjct: 26 YILCLQTGELNEYTERSEMPAEIMCMALGTVPEGEQ-----RSWFLAVGL-ADNTVRILS 79
Query: 387 LPSLEEVCKEPLGGEIIPRSILMTCF--------------------------EGHCYLLV 420
L C P + +P C +G YL +
Sbjct: 80 LDP--NNCLTPCSMQALPSPAESLCLVEMGHTESTTQGGLDDDAPAQRSGNNKGTIYLNI 137
Query: 421 ALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNH 480
L +G + LDP SG L D + LG++P L + + V A S R + Y +
Sbjct: 138 GLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMSSRTWLSYYHQN 197
Query: 481 KLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTV-PLGEAPR 538
+ + ++ + + ++E + + + +T ++++ + + PL PR
Sbjct: 198 RFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPR 256
>gi|356530945|ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Glycine max]
Length = 1449
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 112/294 (38%), Gaps = 90/294 (30%)
Query: 82 YLLGDLA------GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFV 135
+LL D+A G L +L+L + ++ + + K +L +T + N + F+
Sbjct: 369 WLLSDVALLSTKTGELLLLMLVYDGRVVQRLDLSKSKASVLSS-----GITTIGNSLFFL 423
Query: 136 GSRLGDSQLV-----------------------------KLNRSPDE------NGTYVS- 159
SRLGDS LV +L RSP + +G +S
Sbjct: 424 ASRLGDSMLVQFSCGSGVSMMSSNLKEEVGDIEVDAPSKRLRRSPSDALQDMVSGEELSL 483
Query: 160 ------------------VMESFTNLAPIIDMV----------VVDLERQGQGQLVTCSG 191
V +S N+ P+ D + +Q +LV CSG
Sbjct: 484 YGSATNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSG 543
Query: 192 GFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPK--NLDNT------------LV 237
K GSL ++R I E ++LPG KGIW + S + N D++ L+
Sbjct: 544 HGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTRSHNADSSKMADDDDEYHAYLI 603
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
+S T VL + E TE + +T GN+ R V+QV A ++
Sbjct: 604 ISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYERGARIL 657
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 51/235 (21%)
Query: 779 GIIAIIDPEARVIGLRLYNGLFKIIP-------LEKDNFELKASS-----------IRME 820
G + IDP+ R G+ +Y+ I+ L D+ +S I +
Sbjct: 178 GPVVKIDPQGRCGGVLIYDLQMIILKATQVGSGLVGDDDAFGSSGAVAARIESSYMINLR 237
Query: 821 ELE---IQDVQFLHGCQNPTIICIHQ---DVNGRHVKTHEISLKEKEFTKTP-------W 867
+L+ ++D F++G P ++ +H+ GR TH + T W
Sbjct: 238 DLDMRHVKDFTFVYGYIEPVMVILHERELTWAGRVSWTHHTCMISALSISTTLKQHPLIW 297
Query: 868 KQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVA-----------PQIIKSS 916
N+ +A ++ VP P+GG ++IG +I YHS + A+A +I +SS
Sbjct: 298 SAVNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSASCALALNNYAVTLDSSQEIPRSS 357
Query: 917 TIVCYAKVDANGERYLLGDLA------GRLFMLLLEKEEKMDGTFSVKEPKVELL 965
V ++DA +LL D+A G L +L+L + ++ + + K +L
Sbjct: 358 FNV---ELDAANATWLLSDVALLSTKTGELLLLMLVYDGRVVQRLDLSKSKASVL 409
Score = 48.9 bits (115), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 29/140 (20%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYDDGKL--------QQIAEKEIKGACYSMCEFNG 1094
T +GTA V E+ + GRI++F GK+ ++ KE+KGA ++ G
Sbjct: 1128 TLLAIGTAYVQGEDVAAR-GRILLFSL--GKITDNPQTLVSEVYSKELKGAISALASLQG 1184
Query: 1095 KLLASINSTVRLFEWTNEKELRLECSHFNNIIALF---------LKVKGDFILVGDLMRS 1145
LL + + L +W N EL N IA F L + +FIL+GD+ +S
Sbjct: 1185 HLLIASGPKIILHKW-NGTEL--------NGIAFFDAPPLHVVSLNIVKNFILIGDIHKS 1235
Query: 1146 LTLLQYKTMEGSFEEISRDY 1165
+ L +K +++D+
Sbjct: 1236 IYFLSWKEQGAQLSLLAKDF 1255
>gi|390347522|ref|XP_003726804.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Strongylocentrotus purpuratus]
Length = 1439
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 110/258 (42%), Gaps = 49/258 (18%)
Query: 690 NLVVAKNNRIEIHT-VTPEGLRPVKE-------------IFLYGKIAVMKFFRGPTDKKD 735
NLVVAK + + +++ +T + +P + ++GK+ M+ + +D
Sbjct: 29 NLVVAKGSELTVYSMITVDSNKPTDKESKPKNKLEEAATFHIFGKVMSMQSAQVTGSGRD 88
Query: 736 LLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGI---IAIIDPEARVIG 792
L + I+E ++ +L+ L+ H D + I + +DP+ R
Sbjct: 89 ALLLSFMNAKVSIVEYDPNMHDLKTLS-MHYFEEDETKEGVYRNIFHPVVKVDPDHRCAI 147
Query: 793 LRLYNGLFKIIPLEKDNF------ELKASS----------IRMEELE-----IQDVQFLH 831
+ Y ++P +D + AS+ IR+ E++ + D+QFLH
Sbjct: 148 MLTYGSKLVVLPFRRDGLVEDLDKSMSASTRRGALMPSYVIRLNEMDDPICNVLDIQFLH 207
Query: 832 GCQNPTIICIHQDVN---GR-HVKTHEISL------KEKEFTKTPWKQDNIEMEASLVIP 881
G PT++ +++ + GR V+ S+ ++ W Q ++ + V
Sbjct: 208 GYYEPTLLILYEPLRTWAGRVAVRQDTCSIVALSLNMAQKVHPIIWSQSSLPYDCMQVQA 267
Query: 882 VPEPLGGAIIIGQESILY 899
VP+P+GG +I+ S+LY
Sbjct: 268 VPKPIGGVLILAVNSLLY 285
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 26/203 (12%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFHYD-------------DGKLQQIAEKEIKGACYSMC 1090
Y V+ T V+ E+ Q R ++ YD KL+ + EK KG ++C
Sbjct: 1115 YVVVATTHVYSED---LQTRGSVYIYDCIEVVPEPGQPLTKNKLKPLYEKRQKGPVSALC 1171
Query: 1091 EFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQ 1150
E G LL I V ++++ + + L I + VK FIL+ D+M+ LQ
Sbjct: 1172 EVMGFLLTCIGQKVYMWQFKDNDLIGLAFIDTQIYIHNAVSVK-QFILITDVMKGAYFLQ 1230
Query: 1151 YKTMEGSFEEISRDYNPNWMTSIEILDDE---LFLGAENSYNLFICQKDSAATSDEDRTH 1207
Y+ + + +SRD P + E + D+ FL ++ NL + A +
Sbjct: 1231 YQAQDRTLSLVSRDARPLEIFGCEFMVDDKQMAFLVSDADKNLIVFHYHPEAPESHGGAY 1290
Query: 1208 LQEVGTVHLVGDGL-----VQCR 1225
L G ++ +G + V+CR
Sbjct: 1291 LLRRGDMN-IGSAVNTFVRVRCR 1312
Score = 47.8 bits (112), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 113/296 (38%), Gaps = 90/296 (30%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R L G +++L L +DG SV+ ++ + C+ + +G +F+GSRL
Sbjct: 330 DRLALSLKDGEIYVLTL----LVDGMRSVRGFHLDKAAASVLTTCICPMGDGFLFLGSRL 385
Query: 140 GDSQLVKLNRS--------------------------------------------PDENG 155
G+S L+K PDE
Sbjct: 386 GNSLLLKYTEKVSETSPSDASKTEEPKPGEEPPSKKMRSDDASDWMASDTKFLDDPDELE 445
Query: 156 TY---------------VSVMESFTNLAPIIDMVVVD---LERQGQG------QLVTCSG 191
Y + +S N+ P +M++ + L + QG +LVT SG
Sbjct: 446 VYGKQVQKTGTQLTSYSFEICDSLLNIGPCGNMIMGEPAFLSEEFQGNVDPDLELVTTSG 505
Query: 192 GFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL--------------SIGSPKNLDNT-- 235
K G+L +++ I + +LPG +W + S SP++ D
Sbjct: 506 YGKNGALSVLQRTIRPQVVTTFNLPGCLDMWTVKSLKKAKADEKSEESETSPEDKDRHAF 565
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
L+LS + VL +G E+ E GGF++ T + N+ D R ++QV + L+
Sbjct: 566 LILSKQDSSMVLQ-TGQEITEVAAGGFSTQAPTIFASNMGDDRYIVQVMNKSICLM 620
>gi|149038189|gb|EDL92549.1| splicing factor 3b, subunit 3 (predicted) [Rattus norvegicus]
Length = 650
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 92/231 (39%), Gaps = 26/231 (11%)
Query: 342 HRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGE 401
+ + +V C+ ++ + E +++ AVGL D + R++SL + C +PL +
Sbjct: 13 RKEMSADVVCMSLANVPPGEQ-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQ 64
Query: 402 IIPRSILMTCFE-----------------GHCYLLVALGDGSMFYFSLDPASGRLTDKKK 444
+P C G YL + L +G + LDP +G L+D +
Sbjct: 65 ALPAQPESLCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRT 124
Query: 445 VTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYP 504
LG++P L R V A S R + YS + + ++ + +E P
Sbjct: 125 RYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCP 184
Query: 505 DSLALATDSTFTFGTIDEIQKLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ + + +T ++++ + + PL PR+ S +I T
Sbjct: 185 EGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIET 235
Score = 48.5 bits (114), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLK 1131
KL+ + + ++ ++ F G++L + +R+++ +K LR E H N I+ ++
Sbjct: 369 KLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYIS-GIQ 427
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
G ++V D+ S ++YK E + D P W+T+ +LD + GA+ N+
Sbjct: 428 TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 487
Query: 1192 ICQ--KDSAATSDEDRT 1206
+ + ++ DED T
Sbjct: 488 VVRLPPNTNDEVDEDPT 504
>gi|407044064|gb|EKE42344.1| CPSF A subunit region protein, putative [Entamoeba nuttalli P19]
Length = 1145
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 74/390 (18%), Positives = 148/390 (37%), Gaps = 31/390 (7%)
Query: 164 FTNLAPIIDMVVV-DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK-GI 221
F +LAP+ID+ V Q ++ G + +++I++N + + I+LP I I
Sbjct: 391 FKSLAPLIDLKVAPATSSQDTTKMYAFCGKGNQSTIKILKNQLNTLDAVEIELPAIPISI 450
Query: 222 WALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQ 281
W L L +S+ T +L ++ E+ E + + T LQ
Sbjct: 451 WPLK-KETDEYHQYLAISYSNITTLLKITEDEMSECTTSPILLSTPSLLVSMLFDGTFLQ 509
Query: 282 VTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCAT----GCDVYYLEVHGSEI 337
V I+ S + ++ + SCN ++++ + + Y + +
Sbjct: 510 VMTDRIIIYSEPIQQFITE-----DQKYVCASCNGSELIVSVEKNNQTSLIYFQYQSGHL 564
Query: 338 KQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL------PSLE 391
+ + ++ L + P+K A+G D S LLSL +L
Sbjct: 565 LTMERKDNLSKITALALDQF-------HPSKH--CAIGC-IDGSVHLLSLIPNETTKALS 614
Query: 392 EVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQP 451
V + I S+ + YL L +G + DP SG + + +G++P
Sbjct: 615 RVSLQTYECSI--NSLTFNIIDNTSYLFAGLSNGLLGRSVYDPISGEINESSLNFVGSRP 672
Query: 452 TVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALAT 511
L + +V A S R + Y + K+ + +N++ C + +++A+
Sbjct: 673 VTLSNVKDCGEDSVLAISGRSLLSYKNGTKIKTTPLNIQNTTLACGILVPFVDNAIAIIC 732
Query: 512 DSTFTFGTIDEI-QKLHIRTVPLGEAPRRI 540
+ TI+ L + + + PR++
Sbjct: 733 EKVMKIITIESTSSSLTGKNIQISYTPRKV 762
>gi|67624183|ref|XP_668374.1| ENSANGP00000003051 [Cryptosporidium hominis TU502]
gi|54659590|gb|EAL38160.1| ENSANGP00000003051 [Cryptosporidium hominis]
Length = 1493
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 1114 ELRLECSHFNNIIALFLKV-KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTS 1172
EL+ + ++ + + +F+K+ ++ILVGDLMRS+ L ++ G F E+ RD + W+
Sbjct: 1186 ELKRKETYCTHTMIVFIKILNEEYILVGDLMRSVGLWEFDRYTGKFHEVCRDNSIAWVVE 1245
Query: 1173 IEILDDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGL 1221
L +++L ++ + NL + + +DE T L + +H VG+ +
Sbjct: 1246 GIFLSKDMYLISDENRNLRVLMRTLNPENDETYTSLSCIAHLH-VGESI 1293
Score = 47.8 bits (112), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 23/143 (16%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R+L+ D GRLF++L+E ++ D V + ++ +L S + L + + F+ S+L
Sbjct: 333 RWLVLDNLGRLFIMLVEYDQ--DDIDKVVDIRLNILNRYSPFSRIVNLGDDLFFLASKLS 390
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQ--------------- 185
DS L+ N Y ++ S N+ PI D++ + +R+ + +
Sbjct: 391 DSLLL----YSKNNNFY--IISSLPNIGPIKDLLFTNFDRKEETKYEDIPSQISKRDPLP 444
Query: 186 LVTCSGGFKEGSLRIIRNGIGIE 208
L+ G G+L++I NGIG++
Sbjct: 445 LIAACGFGSGGALKLICNGIGLQ 467
>gi|119572189|gb|EAW51804.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_b [Homo sapiens]
Length = 635
Score = 53.1 bits (126), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 90/225 (40%), Gaps = 26/225 (11%)
Query: 348 EVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSI 407
+V C+ ++ + E +++ AVGL D + R++SL + C +PL + +P
Sbjct: 4 DVVCMSLANVPPGEQ-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQALPAQP 55
Query: 408 LMTCFE-----------------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQ 450
C G YL + L +G + LDP +G L+D + LG++
Sbjct: 56 ESLCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSR 115
Query: 451 PTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALA 510
P L R V A S R + YS + + ++ + +E P+ +
Sbjct: 116 PVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAI 175
Query: 511 TDSTFTFGTIDEIQKLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
+ +T ++++ + + PL PR+ S +I T
Sbjct: 176 STNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIET 220
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ QL E A S+ +F ++VL N ++ Y
Sbjct: 290 IQGNTLDLV---QLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 346
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 347 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 406
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 407 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 465
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 466 DKFGNICVVRLPPNTNDEVDEDPT 489
>gi|68005631|ref|XP_670088.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56485013|emb|CAI03225.1| hypothetical protein PB301095.00.0 [Plasmodium berghei]
Length = 177
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 1066 IFHYD-DGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNN 1124
++ YD + KL + I+ Y C FNGK++ S+ + +R++ +K+L +C + +
Sbjct: 30 VYTYDINYKLNLLHITPIEDQPYCFCPFNGKVIVSVGNKLRIYA-LGKKKLLKKCEYKDI 88
Query: 1125 IIALF-LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
A+ +KV GD I D+ S+ + Y + + IS D P W+T EILD +
Sbjct: 89 PEAIVSIKVSGDRIFASDIRESVLIFFYDSNQNVIRLISDDIIPRWITCSEILDHHTIIA 148
Query: 1184 AENSYNLFI 1192
A+ ++FI
Sbjct: 149 ADKFDSVFI 157
>gi|167526060|ref|XP_001747364.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774199|gb|EDQ87831.1| predicted protein [Monosiga brevicollis MX1]
Length = 1324
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 23/152 (15%)
Query: 785 DPEARVIGLRLYNGLFKIIPLE----KDNFELKASSIRMEEL-----EIQDVQFLHGCQN 835
DP R IG +Y IIP + N + + I +E+L + + FL G
Sbjct: 112 DPLHRCIGALVYGCRLVIIPAHALQPRTNVQFRV--IDLEKLSSPLGQAKSFCFLTGYTT 169
Query: 836 PTIICIHQDVN---GRHVKTHEISL---------KEKEFTKTPWKQDNIEMEASLVIPVP 883
PT + +H+ GRH + + +F T W +D++ + ++P P
Sbjct: 170 PTALLLHEPRPVWVGRHAVGRDSCVLSALSCELDTTDDFAPTVWAKDSLPSDCFALVPTP 229
Query: 884 EPLGGAIIIGQESILYHSGKSYVAVAPQIIKS 915
+PLGGA+I+ +L+ + S AVA I +
Sbjct: 230 QPLGGALIVSPNMVLHTNQASSSAVAVNAIAA 261
>gi|350413821|ref|XP_003490124.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Bombus impatiens]
Length = 1417
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y VLGT + E+ + GRI+IF + +QI KE KG ++ +
Sbjct: 1093 YIVLGTNYNYGEDITSR-GRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPITAITQV 1151
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
+G L++++ + +++ + + + I L +K IL+ D+ +S++LL+++
Sbjct: 1152 SGFLVSAVGQKIYIWQLKDNDLVGVAFIDTQIYIHQMLSIKS-LILIADVYKSISLLRFQ 1210
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLG-----AENSYNLFICQKDS 1197
+ +SRD+ P + +IE L D LG E++ LF+ Q +S
Sbjct: 1211 EEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFLVADGESNMALFMYQPES 1260
Score = 48.9 bits (115), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 52/266 (19%)
Query: 686 RTDLNLVVAKNNRIEIHTVTPE----------GLRPVK-------EIFLYGKIAVMKFFR 728
R++ L VA N I I + P+ RP K + L+G + M+
Sbjct: 25 RSEKCLAVAGANIIRIFRLIPDVDITKKEKYTESRPPKMKLECLSQYTLHGNVMSMQAVT 84
Query: 729 GPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSD-RIGKPSENGI-IAIIDP 786
++D L + + ++E D +L ++ + + R G + + I I +DP
Sbjct: 85 LVGSQRDSLLLSFRDAKLSVVEYDQDTHDLRTVSLHYFEEEEIRDGWTNHHHIPIVRVDP 144
Query: 787 EARVIGLRLYNGLFKIIPLEKD----------NFE--------LKASSIRMEELE----- 823
E R + +Y ++P +KD N + L + I ++ LE
Sbjct: 145 EGRCAVMLIYGRKLVVLPFKKDPSLDDGDLLDNSKALSNKTPILSSYMIVLKSLEEKMDN 204
Query: 824 IQDVQFLHGCQNPTIICIHQDV---NGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ +++ V +GR + ISL ++ W N+
Sbjct: 205 IIDLQFLHGYYEPTLLILYEPVRTFSGRIAVRQDTCAMVAISLNIQQRVHPIIWSVSNLP 264
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ +PV +PLGG +I+ S++Y
Sbjct: 265 FDCYQAVPVKKPLGGTLIMAVNSLIY 290
Score = 44.7 bits (104), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
+LVT SG K G+L +++ I + +LPG + +W + IG+ N +
Sbjct: 507 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTV-IGTLNNDEQIRPEAEGSHA 565
Query: 236 -LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDP-RTVLQVT 283
L+LS T +L +G E+ E + GF++ T + GN+ R ++QVT
Sbjct: 566 FLILSQEDSTMILQ-TGQEINEVDQSGFSTQGSTIFAGNLGANRYIVQVT 614
>gi|229335612|ref|NP_001108153.2| cleavage and polyadenylation specificity factor subunit 1 [Danio
rerio]
Length = 1449
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y LGT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 1126 YVALGTCLMQGEEVTCR-GRILILDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 1184
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
+G L+++I + L+ + + I +K +FIL D+M+S++LL+Y+
Sbjct: 1185 SGFLVSAIGQKIFLWSLKDNDLTGMAFIDTQLYIHQMYSIK-NFILAADVMKSISLLRYQ 1243
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + SIE + D FL ++ NL +
Sbjct: 1244 PESKTLSLVSRDAKPLEVYSIEFMVDNNQLGFLVSDRDKNLMV 1286
Score = 46.2 bits (108), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDNFE---------------LKASSIRMEELE----- 823
+DPE R + +Y ++P KD L + I + EL+
Sbjct: 143 VDPENRCAVMLVYGTCLVVLPFRKDTLADEQEGIVGEGQKSSFLPSYIIDVRELDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D++FLHG PT++ + +Q GR + ISL ++ W N+
Sbjct: 203 IIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHPVIWSLSNLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + V+ VP+P+GG ++ S+LY
Sbjct: 263 FDCNQVMAVPKPIGGVVVFAVNSLLY 288
Score = 43.1 bits (100), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 28/133 (21%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-------------------- 224
++V CSG K G+L +++ I + +LPG +W +
Sbjct: 499 EVVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCHDMWTVIYCEEKPEKPSAEGDGESPE 558
Query: 225 ------SIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPR 277
+I K L+LS T +L +G E+ E + GF + T Y GN+ D +
Sbjct: 559 EEKREPTIEDDKKKHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVYAGNIGDNK 617
Query: 278 TVLQVTPSAAILI 290
++QV+P L+
Sbjct: 618 YIIQVSPMGIRLL 630
>gi|351713968|gb|EHB16887.1| Cleavage and polyadenylation specificity factor subunit 1
[Heterocephalus glaber]
Length = 1440
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
K + + EKE KG ++C NG L+++I + L+ + + I + V
Sbjct: 1156 KFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISV 1215
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYN 1189
K +FIL D+M+S++LL+Y+ + +SRD P + S++ + D FL ++ N
Sbjct: 1216 K-NFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRN 1274
Query: 1190 LFI 1192
L +
Sbjct: 1275 LMV 1277
Score = 43.1 bits (100), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVIFAVNSLLY 288
Score = 42.0 bits (97), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-------------------S 225
++V CSG K G+L +++ I + +LPG +W +
Sbjct: 498 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEETPKAEGSEQE 557
Query: 226 IGSPKNLDNT-----LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
+P+ D+ L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 558 PSAPEAQDDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 616
Query: 280 LQVTP 284
+QV+P
Sbjct: 617 VQVSP 621
>gi|340710064|ref|XP_003393618.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Bombus terrestris]
Length = 1417
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y VLGT + E+ + GRI+IF + +QI KE KG ++ +
Sbjct: 1093 YIVLGTNYNYGEDITSR-GRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPITAITQV 1151
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
+G L++++ + +++ + + + I L +K IL+ D+ +S++LL+++
Sbjct: 1152 SGFLVSAVGQKIYIWQLKDNDLVGVAFIDTQIYIHQMLSIKS-LILIADVYKSISLLRFQ 1210
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLG-----AENSYNLFICQKDS 1197
+ +SRD+ P + +IE L D LG E++ LF+ Q +S
Sbjct: 1211 EEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFLVADGESNMALFMYQPES 1260
Score = 48.9 bits (115), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 52/266 (19%)
Query: 686 RTDLNLVVAKNNRIEIHTVTPE----------GLRPVK-------EIFLYGKIAVMKFFR 728
R++ L VA N I I + P+ RP K + L+G + M+
Sbjct: 25 RSEKCLAVAGANIIRIFRLIPDVDITKKEKYTESRPPKMKLECLSQYTLHGNVMSMQAVT 84
Query: 729 GPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSD-RIGKPSENGI-IAIIDP 786
++D L + + ++E D +L ++ + + R G + + I I +DP
Sbjct: 85 LVGSQRDSLLLSFRDAKLSVVEYDQDTHDLRTVSLHYFEEEEIRDGWTNHHHIPIVRVDP 144
Query: 787 EARVIGLRLYNGLFKIIPLEKD----------NFE--------LKASSIRMEELE----- 823
E R + +Y ++P +KD N + L + I ++ LE
Sbjct: 145 EGRCAVMLIYGRKLVVLPFKKDPSLDDGDLLDNSKALSNKTPILSSYMIVLKSLEEKMDN 204
Query: 824 IQDVQFLHGCQNPTIICIHQDV---NGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ +++ V +GR + ISL ++ W N+
Sbjct: 205 IIDLQFLHGYYEPTLLILYEPVRTFSGRIAVRQDTCAMVAISLNIQQRVHPIIWSVSNLP 264
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ +PV +PLGG +I+ S++Y
Sbjct: 265 FDCYQAVPVKKPLGGTLIMAVNSLIY 290
Score = 44.3 bits (103), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
+LVT SG K G+L +++ I + +LPG + +W + IG+ N +
Sbjct: 507 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTV-IGTLNNDEQIRPEAEGSHA 565
Query: 236 -LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDP-RTVLQVT 283
L+LS T +L +G E+ E + GF++ T + GN+ R ++QVT
Sbjct: 566 FLILSQEDSTMILQ-TGQEINEVDQSGFSTQGSTIFAGNLGANRYIVQVT 614
>gi|238880502|gb|EEQ44140.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1168
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 141/335 (42%), Gaps = 32/335 (9%)
Query: 153 ENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
+N + V+E+ L+PI D ++D +LVT S ++ I +G+
Sbjct: 424 DNLALIDVLET---LSPITDSKIID------SKLVTLSS---HSYVKSITHGVPTTTLVE 471
Query: 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFY 270
LP I+ + D LV+S ++ L LS G VE+ E F DQ T
Sbjct: 472 SPLPITPTDIFTTKLSLESANDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQPTIA 531
Query: 271 CGNVDPRTVLQVTPSAAILIS-TESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVY 328
V +V+Q+ + + + + W PP G +I+ + N QVL A + V
Sbjct: 532 VQQVGIASVVQIYSNGIKHVRMVNGNKKTTDWFPPAGITITHATTNNQQVLIALSNLSVV 591
Query: 329 YLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP 388
Y E+ ++ QL E+A I+ ++ +E SE K+ A +G +D + +++SL
Sbjct: 592 YFEIDATD-DQLIEYQDRLEIATT-ITAMAIQENISE--KSPFAIIGC-SDETIQVVSLQ 646
Query: 389 SLEEVCKEPLGGEIIPRSILMTCF------EGHCYLLVALGDGSMFYFSLDPASGRLTDK 442
E C E + + + E H + + + +G +D +G L++
Sbjct: 647 --EHNCLEIKSLQALSANSSSLKMLKSSGKETHVH--IGMENGVYARIKIDTINGNLSNS 702
Query: 443 KKVTLGTQPTVLKTFR-SLSTTNVFACSDRPTVIY 476
+ +G++P L + S + A S P + Y
Sbjct: 703 RVKYIGSKPVSLSVIKFSSEIEGILAISSAPWISY 737
>gi|307190910|gb|EFN74734.1| Cleavage and polyadenylation specificity factor subunit 1 [Camponotus
floridanus]
Length = 1418
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y VLGT + E+ + GRI+IF + +QI KE KG ++ +
Sbjct: 1093 YIVLGTNYNYGEDITSR-GRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPITAITQV 1151
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
+G L++++ + +++ + + + I L +K IL+ D+ +S++LL+++
Sbjct: 1152 SGFLVSAVGQKIYIWQLKDNDLVGVAFIDTQIYIHQMLSIKS-LILIADVYKSISLLRFQ 1210
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLG-----AENSYNLFICQKDS 1197
+ +SRD+ P + +IE L D LG E++ LF+ Q +S
Sbjct: 1211 EEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFFLADGESNLALFMYQPES 1260
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 114/267 (42%), Gaps = 53/267 (19%)
Query: 686 RTDLNLVVAKNNRIEIHTVTPE-----------------GLRPVKEIFLYGKIAVMKFFR 728
RT+ LVVA N I + + P+ L + + L+G I M+
Sbjct: 25 RTEKCLVVAGANVIRVFRLIPDIDMTRREKYTENRPPKMKLECLAQYTLHGNIMSMQAVH 84
Query: 729 GPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSD-RIGKPSENGI-IAIIDP 786
++D L + + ++E DI +L ++ + + + G + + I I +DP
Sbjct: 85 LIGSQRDSLLLSFRDAKLSVVEYDQDIHDLRTVSLHYFEEEEIKDGWTNHHHIPIVRVDP 144
Query: 787 EARVIGLRLYNGLFKIIPLEKD----------NFELKASS---------IRMEELE---- 823
E R + +Y ++P KD + +L +S+ I ++ LE
Sbjct: 145 EGRCAIMLIYGRKLVVLPFRKDPSLDDGDLLDSAKLTSSNKTPILSSYMIVLKTLEEKMD 204
Query: 824 -IQDVQFLHGCQNPTIICIHQDV---NGRHVKTHE------ISLK-EKEFTKTPWKQDNI 872
+ D+QFL+G PT++ +++ V +GR + ISL ++ W N+
Sbjct: 205 NVIDLQFLYGYYEPTLLILYEPVRTFSGRIAVRQDTCAMVAISLNIQQRVHPIIWSVSNL 264
Query: 873 EMEASLVIPVPEPLGGAIIIGQESILY 899
+ V+PV +PLGG +I+ S++Y
Sbjct: 265 PFDCYQVVPVKKPLGGTLIMAVNSLIY 291
Score = 44.7 bits (104), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
+LVT SG K G+L +++ I + +LPG + +W + IG+ N +
Sbjct: 506 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTV-IGTLNNDEQVKAEAEGSHA 564
Query: 236 -LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDP-RTVLQVT 283
L+LS T +L +G E+ E + GF++ T + GN+ R ++QVT
Sbjct: 565 FLILSQEDSTMILQ-TGQEINEVDQSGFSTQGSTVFAGNLGANRYIVQVT 613
>gi|110750698|ref|XP_624382.2| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
[Apis mellifera]
Length = 1415
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y VLGT + E+ + GRI+IF + +QI KE KG ++ +
Sbjct: 1091 YIVLGTNYNYGEDITSR-GRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPITAITQV 1149
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
+G L++++ + +++ + + + I L +K IL+ D+ +S++LL+++
Sbjct: 1150 SGFLVSAVGQKIYIWQLKDNDLVGVAFIDTQIYIHQMLSIKS-LILIADVYKSISLLRFQ 1208
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLG-----AENSYNLFICQKDS 1197
+ +SRD+ P + +IE L D LG E++ LF+ Q +S
Sbjct: 1209 EEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFLVADGESNIALFMYQPES 1258
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 52/266 (19%)
Query: 686 RTDLNLVVAKNNRIEIHTVTPE----------GLRPVK-------EIFLYGKIAVMKFFR 728
R++ LVVA N I + + P+ RP K + L+G + M+
Sbjct: 25 RSEKCLVVAGANIIRVFRLIPDVDITKKEKYTESRPPKMKLECLSQYTLHGNVMSMQAVT 84
Query: 729 GPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSD-RIGKPSENGI-IAIIDP 786
++D L + + ++E D +L ++ + + R G + + I I +DP
Sbjct: 85 LVGSQRDSLLLSFRDAKLSVVEYDQDTHDLRTVSLHYFEEEEIRDGWTNHHHIPIVRVDP 144
Query: 787 EARVIGLRLYNGLFKIIPLEKD----NFEL----KASS----------IRMEELE----- 823
E R + +Y ++P +KD + +L KASS I ++ LE
Sbjct: 145 EGRCAVMLIYGRKLVVLPFKKDPSLDDGDLLDNSKASSNKTPILSSYMIVLKCLEEKMDN 204
Query: 824 IQDVQFLHGCQNPTIICIHQDV---NGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ +++ V +GR + ISL ++ W N+
Sbjct: 205 IIDLQFLHGYYEPTLLILYEPVRTFSGRIAVRQDTCAMVAISLNIQQRVHPIIWSVSNLP 264
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ +PV +PLGG +I+ S++Y
Sbjct: 265 FDCYQAVPVKKPLGGTLIMAVNSLIY 290
Score = 45.1 bits (105), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
+LVT SG K G+L ++++ I + +LPG + +W + IG+ N +
Sbjct: 505 ELVTTSGYGKNGALCVLQHSIRPQVVTTFELPGCEDMWTV-IGTLNNDEQIRPEAEGSHA 563
Query: 236 -LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDP-RTVLQVT 283
L+LS T +L +G E+ E + GF++ T + GN+ R ++QVT
Sbjct: 564 FLILSQEDSTMILQ-TGQEINEVDQSGFSTQGSTIFAGNLGANRYIVQVT 612
>gi|322792443|gb|EFZ16427.1| hypothetical protein SINV_15375 [Solenopsis invicta]
Length = 1532
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y VLGT + E+ + GRI+IF + +QI KE KG ++ +
Sbjct: 1060 YIVLGTNYNYGEDITSR-GRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPITAITQV 1118
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
+G L++++ + +++ + + + I L +K IL+ D+ +S++LL+++
Sbjct: 1119 SGFLVSAVGQKIYIWQLKDNDLVGVAFIDTQIYIHQMLSIKS-LILIADVYKSISLLRFQ 1177
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLG-----AENSYNLFICQKDS 1197
+ +SRD+ P + +IE L D LG E++ LF+ Q +S
Sbjct: 1178 EEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFIVADGESNLALFMYQPES 1227
Score = 46.6 bits (109), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 717 LYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSD-RIGKP 775
L+G I M+ ++D L + + ++E DI +L ++ + + + G
Sbjct: 41 LHGNIMSMQAVHLIGSQRDSLLLSFRDAKLSVVEYDQDIHDLRTVSLHYFEEEEIKDGWT 100
Query: 776 SENGI-IAIIDPEARVIGLRLYNGLFKIIPLEKD----------NFELKASS-------- 816
+ + I I +DPE R + ++ ++P KD +L +S+
Sbjct: 101 NHHHIPIVRVDPEGRCAVMLIFGRKLVVLPFRKDPSLDDGDLLDTAKLTSSNKAPILSSY 160
Query: 817 -IRMEELE-----IQDVQFLHGCQNPTIICIHQDVN---GRHVKTHE------ISLK-EK 860
I ++ LE + D+QFLHG PT++ +++ V GR + ISL ++
Sbjct: 161 MIVLKSLEEKMDNVIDLQFLHGYYEPTLLILYEPVRTFAGRIAVRQDTCAMVAISLNIQQ 220
Query: 861 EFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
W N+ + +PV +PLGG +I+ S++Y
Sbjct: 221 RVHPIIWSVSNLPFDCYQAVPVKKPLGGTLIMAFNSLIY 259
Score = 43.9 bits (102), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 12/109 (11%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLD---------NT 235
+LVT SG K G+L +++ I + +LPG + +W + IG+ N +
Sbjct: 474 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTV-IGTLNNDEIKTEAEGSHAF 532
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDP-RTVLQVT 283
L+LS T +L +G E+ E + GF++ T + GN+ R ++QVT
Sbjct: 533 LILSQEDSTMILQ-TGQEINEVDQSGFSTQGSTVFAGNLGANRYIVQVT 580
>gi|444319478|ref|XP_004180396.1| hypothetical protein TBLA_0D03780 [Tetrapisispora blattae CBS 6284]
gi|387513438|emb|CCH60877.1| hypothetical protein TBLA_0D03780 [Tetrapisispora blattae CBS 6284]
Length = 1330
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 26/285 (9%)
Query: 194 KEGSLRIIRNGIGIEEHACIDLP-GIKGIWALSIGSPKNLDNTLV-LSFVGHTRVLTLSG 251
KE SLR++ N + + LP G K +W SI P++ + L+ LSF +++L
Sbjct: 460 KEASLRMLSNSVNFKSLISAPLPSGAKNLW--SIKLPEDAHHKLLFLSFQNSSKILITDN 517
Query: 252 AEVEETEMGG---FTSDQQTFYCGNVDPRTVLQVTPS--AAILISTESKARVS--SWEPP 304
+EE + + T + ++ +++Q++ + I +SK+ S W PP
Sbjct: 518 NSIEELNIKKNPFILDNDSTLHVCSIGHASIVQISENEMKQITYKNDSKSFESKLDWLPP 577
Query: 305 NGKSISVVSCNKNQV-LCATGCDVYYLEVH---GSEIKQLAHRALEYEVACLDISPLSNE 360
G I + K Q+ L + ++ Y E++ S + L E+ +S
Sbjct: 578 AGIKIVRATNTKTQLALALSNNEIVYFEINTETSSNSDTMHELQLHIEMTSSILSMSMGT 637
Query: 361 ETSSEPAKAQLAAVG----LWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHC 416
SS+ AVG + + IS + LS LE V + L P +++ F+G
Sbjct: 638 GMSSD-----FLAVGCDDSVVSIISLKKLSDEFLEIVSIQSLLSS--PTDLVLLHFKGKI 690
Query: 417 YLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
L + +G S++P +G++ D K LGT L +S
Sbjct: 691 QLHIGQENGVYVRSSINPTNGQIFDVKLKYLGTTALNLSVLNRVS 735
>gi|380014171|ref|XP_003691113.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Apis florea]
Length = 1583
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y VLGT + E+ + GRI+IF + +QI KE KG ++ +
Sbjct: 1091 YIVLGTNYNYGEDITSR-GRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPITAITQV 1149
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
+G L++++ + +++ + + + I L +K IL+ D+ +S++LL+++
Sbjct: 1150 SGFLVSAVGQKIYIWQLKDNDLVGVAFIDTQIYIHQMLSIKS-LILIADVYKSISLLRFQ 1208
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLG-----AENSYNLFICQKDS 1197
+ +SRD+ P + +IE L D LG E++ LF+ Q +S
Sbjct: 1209 EEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFLVADGESNIALFMYQPES 1258
Score = 49.3 bits (116), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 52/266 (19%)
Query: 686 RTDLNLVVAKNNRIEIHTVTPE----------GLRPVK-------EIFLYGKIAVMKFFR 728
R++ LVVA N I + + P+ RP K + L+G + M+
Sbjct: 25 RSEKCLVVAGANIIRVFRLIPDVDITKKEKYTESRPPKMKLECLSQYTLHGNVMSMQAVT 84
Query: 729 GPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSD-RIGKPSENGI-IAIIDP 786
++D L + + ++E D +L ++ + + R G + + I I +DP
Sbjct: 85 LVGSQRDSLLLSFRDAKLSVVEYDQDTHDLRTVSLHYFEEEEIRDGWTNHHHIPIVRVDP 144
Query: 787 EARVIGLRLYNGLFKIIPLEKD----NFEL----KASS----------IRMEELE----- 823
E R + +Y ++P +KD + +L KASS I ++ LE
Sbjct: 145 EGRCAVMLIYGRKLVVLPFKKDPSLDDGDLLDNSKASSNKTPILSSYMIVLKCLEEKMDN 204
Query: 824 IQDVQFLHGCQNPTIICIHQDV---NGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ +++ V +GR + ISL ++ W N+
Sbjct: 205 IIDLQFLHGYYEPTLLILYEPVRTFSGRIAVRQDTCAMVAISLNIQQRVHPIIWSVSNLP 264
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ +PV +PLGG +I+ S++Y
Sbjct: 265 FDCYQAVPVKKPLGGTLIMAVNSLIY 290
Score = 45.1 bits (105), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
+LVT SG K G+L ++++ I + +LPG + +W + IG+ N +
Sbjct: 505 ELVTTSGYGKNGALCVLQHSIRPQVVTTFELPGCEDMWTV-IGTLNNDEQIRPEAEGSHA 563
Query: 236 -LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDP-RTVLQVT 283
L+LS T +L +G E+ E + GF++ T + GN+ R ++QVT
Sbjct: 564 FLILSQEDSTMILQ-TGQEINEVDQSGFSTQGSTIFAGNLGANRYIVQVT 612
>gi|448114553|ref|XP_004202604.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
gi|359383472|emb|CCE79388.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
Length = 1248
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLGTAVVHPEENEPKQGRIIIF 1067
+ D +I+ + F E LS KF D ++Y ++GT ++N + + F
Sbjct: 881 VFDYKLNKIVKTVEFFNDERILSSCEIKFNSSDNSSYLIVGTTRNSLDKN--IRHYLYTF 938
Query: 1068 --------HYDDGK--LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRL 1117
H G+ L I + E + A ++M EFN +LL + +RL++ +++ LR
Sbjct: 939 KVTSSRNSHSQKGQKTLLFIHKTESEFAPFAMIEFNNRLLIGTKNLLRLYDIGHKQLLRK 998
Query: 1118 ECS---HFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIE 1174
S +F NII L + G+ I+ D S T ++Y +E F ++ D +TS+
Sbjct: 999 ASSSIDYFENIIKL-TYMGGNRIMAADANISSTFVKYDQVENQFFPLADDIMKRKITSMC 1057
Query: 1175 ILDDELFLGAENSYNLFICQ 1194
LD + +G + N+F+ +
Sbjct: 1058 SLDYDTIVGGDKFGNIFVSR 1077
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 154/369 (41%), Gaps = 32/369 (8%)
Query: 153 ENGTYVSVMESFTNLAPIIDMVVVDLERQGQG-----QLVTCSGGFKEGSLRIIRNGIGI 207
EN V VM+S L P+ D +++ R + L T S F ++I+ +G+ +
Sbjct: 402 ENLALVDVMDS---LNPVTDATLLE-TRTSESPDPLINLFTLSSRF----IKILTHGMPV 453
Query: 208 EEHACIDLPGIKG-IWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSD 265
+ LP I+A + D+ LV+S ++ L LS G VEE F +D
Sbjct: 454 NQLVTSPLPIHPSLIFATKKFNNSVNDDYLVISSELSSQTLVLSIGEVVEEVSDSEFVTD 513
Query: 266 QQTFYCGNVDPRTVLQVTPSAA-----ILISTESKARVSSWEPPNGKSISVVSCNKNQVL 320
Q + +++QV + I E + + W PP G S++ S N Q++
Sbjct: 514 QPAIHVQQTGNSSIVQVFSNGIRSIRHIRNGDEEIKKTTDWYPPAGISVTKASGNSTQLI 573
Query: 321 CA-TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379
+ +V Y E+ + QL EV+ IS L+ + ++ A +G +D
Sbjct: 574 IGMSNREVCYFEIDPVD-DQLVEYQERLEVSGGSISSLAILSSKDPEQRSAHAIIG-SSD 631
Query: 380 ISARLLSLPS---LEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPAS 436
+ +++SL L V + L + SILM E Y+ + + +G +D S
Sbjct: 632 ETIQVVSLKRHNCLSVVALQALSSK--STSILMLRHEDSIYVHIGMENGLYVCTMIDEVS 689
Query: 437 GRLTDKKKVTLGTQPTVLKTFRSLSTT----NVFACSDRPTVIYSSNHKLVFSNVNLRQV 492
G+L+D + LG++ L + + + A S RP Y + + S + +
Sbjct: 690 GKLSDTRIKFLGSKSVRLSPIKVPGSAGEEDGILALSSRPWYGYFAEGRFKLSPLINCSL 749
Query: 493 NHMCSLNAE 501
H S AE
Sbjct: 750 THGTSFYAE 758
>gi|268580265|ref|XP_002645115.1| Hypothetical protein CBG16808 [Caenorhabditis briggsae]
gi|296439546|sp|A8XPU7.1|CPSF1_CAEBR RecName: Full=Probable cleavage and polyadenylation specificity
factor subunit 1; AltName: Full=Cleavage and
polyadenylation specificity factor 160 kDa subunit;
Short=CPSF 160 kDa subunit
Length = 1454
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 69/138 (50%), Gaps = 17/138 (12%)
Query: 778 NGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELE-----IQDVQFLHG 832
N I DP R +Y I+P +++ + + I +++++ + D+ FL G
Sbjct: 138 NPPIVRTDPANRCAASLVYGKHIAILPFHENSKRILSYIIPLKQIDPRLDNVADMVFLEG 197
Query: 833 CQNPTIICIH---QDVNGRHVKTHE--------ISLKEKEFTKTPWKQDNIEMEASLVIP 881
PTI+ ++ Q GR ++ +++ +++F W+ N+ M+ + ++
Sbjct: 198 YYEPTILFLYEPLQTTPGRACVRYDTMCIMGVSVNIVDRQFAVV-WQTANLPMDCNSLLS 256
Query: 882 VPEPLGGAIIIGQESILY 899
+P+PLGGA++ G +I+Y
Sbjct: 257 IPKPLGGAVVFGSNTIVY 274
>gi|332018184|gb|EGI58789.1| Cleavage and polyadenylation specificity factor subunit 1 [Acromyrmex
echinatior]
Length = 1412
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y VLGT + E+ + GRI+IF + +QI KE KG ++ +
Sbjct: 1087 YIVLGTNYNYGEDITSR-GRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPITAITQV 1145
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
+G L++++ + +++ + + + I L +K IL+ D+ +S++LL+++
Sbjct: 1146 SGFLVSAVGQKIYIWQLKDNDLVGVAFIDTQIYIHQMLSIKS-LILIADVYKSISLLRFQ 1204
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLG-----AENSYNLFICQKDS 1197
+ +SRD+ P + +IE L D LG E++ LF+ Q +S
Sbjct: 1205 EEYRTLSLVSRDFRPAEVYTIEYLIDNSNLGFIVADGESNLALFMYQPES 1254
Score = 48.5 bits (114), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 109/267 (40%), Gaps = 53/267 (19%)
Query: 686 RTDLNLVVAKNNRIEIHTVTPE----------GLRPVK-------EIFLYGKIAVMKFFR 728
R + LVVA N I + + P+ RP K + L+G I M+
Sbjct: 25 RNEKCLVVAGANVIRVFRLIPDVDMTRREKYTETRPPKMKLECLTQYTLHGNIMSMQAVH 84
Query: 729 GPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSD-RIGKPSENGI-IAIIDP 786
++D L + + ++E DI +L ++ + + + G + + I I +DP
Sbjct: 85 LIGSQRDSLLLSFRDAKLSVVEYDQDIHDLRTVSLHYFEEEEIKDGWTNHHHIPIVRVDP 144
Query: 787 EARVIGLRLYNGLFKIIPLEKD-------------------NFELKASSIRMEELE---- 823
E R + ++ ++P KD L + I ++ LE
Sbjct: 145 EGRCAVMLIFGRKLVVLPFRKDPSLDDGDLLDSAKLTSTNKTPILSSYMIVLKTLEEKMD 204
Query: 824 -IQDVQFLHGCQNPTIICIHQDV---NGRHVKTHE------ISLK-EKEFTKTPWKQDNI 872
+ D+QFLHG PT++ +++ V +GR + ISL ++ W N+
Sbjct: 205 NVIDLQFLHGYYEPTLLILYEPVRTFSGRIAVRQDTCAMVAISLNIQQRVHPIIWSVSNL 264
Query: 873 EMEASLVIPVPEPLGGAIIIGQESILY 899
+ +PV +PLGG +I+ S++Y
Sbjct: 265 PFDCYQAVPVKKPLGGTLIMAVNSLIY 291
Score = 43.9 bits (102), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-------SIGSPKNLDNTLV 237
+LVT SG K G+L +++ I + LPG + +W + I + + L+
Sbjct: 506 ELVTTSGYGKNGALCVLQRSIRPQVVTTFQLPGCEDMWTVIGIVNNDEIRTEEGSHAFLI 565
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDP-RTVLQVT 283
LS T VL +G E+ E + GF++ T + GN+ R ++QVT
Sbjct: 566 LSQEDSTMVLQ-TGQEINEVDQSGFSTQGSTVFAGNLGANRYIVQVT 611
>gi|195150431|ref|XP_002016158.1| GL10645 [Drosophila persimilis]
gi|194110005|gb|EDW32048.1| GL10645 [Drosophila persimilis]
Length = 1459
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 116/271 (42%), Gaps = 61/271 (22%)
Query: 690 NLVVAKNNRIEIHTVTP-------EGLRP-------------VKEIFLYGKIAVMKFFRG 729
NLVVA N ++++ ++P + L P + FLYG + ++
Sbjct: 29 NLVVAGANMLKVYRISPNVEAGQRQKLNPNEMRIAPKMRLECLATYFLYGNVMSLQCVSL 88
Query: 730 PTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAII--DPE 787
+D L + + +L+ D L+ L+ + D G + + ++ DP+
Sbjct: 89 AGAMQDALLVSFKDAKLSVLQHDPDTYALKTLSLHYFEEEDIRGGWTGRYFVPVVRVDPD 148
Query: 788 ARVIGLRLYNGLFKIIPLEKDN----FEL-------KASS-------------IRMEELE 823
AR + +Y ++P KDN EL KA + I ++EL+
Sbjct: 149 ARCAVMLVYGKRLVVLPFRKDNSLDEIELTDVKPFKKAPTAMVSRTPIMASYLITLKELD 208
Query: 824 -----IQDVQFLHGCQNPTIICIHQDV---NGR-HVKTH-----EISLK-EKEFTKTPWK 868
+ D+QFLHG PT++ +++ V +GR V++ ISL ++ W
Sbjct: 209 EKIDNVLDIQFLHGYYEPTLLILYEPVRTCSGRIKVRSDTCVLVAISLNIQQRVHPIIWT 268
Query: 869 QDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
+++ + V P+ +P+GG +++ +++Y
Sbjct: 269 VNSLPFDCFQVYPIQKPIGGCLVMTVNAVIY 299
Score = 44.7 bits (104), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 160 VMESFTNLAPIIDMVV---VDLERQG-------------QGQLVTCSGGFKEGSLRIIRN 203
V +S N+API M V+ E G + +LV +G K G+L + N
Sbjct: 489 VCDSLINVAPINYMCAGERVEFEEDGTTLRPHAENLHDLKIELVAATGHSKNGALSVFVN 548
Query: 204 GIGIEEHACIDLPGIKGIW-----ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
I + +L G +W A S + + ++LS T VL +G E+ E E
Sbjct: 549 CINPQIITSFELDGCLDVWTVFDDATKKTSRHDQHDFMLLSQSNSTLVLQ-TGQEINEIE 607
Query: 259 MGGFTSDQQTFYCGNV-DPRTVLQVT 283
GFT +Q T + GN+ R ++QVT
Sbjct: 608 NTGFTVNQATIFVGNLGQQRFIVQVT 633
Score = 40.8 bits (94), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
KL+++ +KE KG ++ + G L+ + + +++ + + + N + + V
Sbjct: 1176 KLKEVFKKEQKGPVSAISDVLGFLVTGLGQKIYIWQLRDGDLIGVAFIDTNIYVHQIITV 1235
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
K I + D+ +S++LL+++ + SRD+NP + IE + D LG
Sbjct: 1236 KS-LIFIADVYKSISLLRFQEEHRTLSLASRDFNPLEVYGIEFMVDNSNLG 1285
>gi|124359136|gb|ABD32504.2| CPSF A subunit, C-terminal; WD40-like [Medicago truncatula]
Length = 632
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 20/279 (7%)
Query: 280 LQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVH-GSEI 337
+QV P+ I + ++ W P ++I+ V N+ QV+ A G ++ Y EV ++
Sbjct: 1 MQVHPNGIRHIRED--GHINEWRTPGKRTIAKVGSNRLQVVIALNGGELIYFEVDVTGQL 58
Query: 338 KQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEP 397
++ + +VACLDI+P+ +++ AVG + D + R+LSL + C +
Sbjct: 59 MEVEKHEMSGDVACLDIAPVPEGRQ-----RSRFLAVGSY-DKTIRILSLDP--DDCMQT 110
Query: 398 LGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF 457
LG + + + F V +G + +D +G L+D + LG +P L
Sbjct: 111 LGIQSLSSASESLLFLE-----VQASNGVLSRTVVDMVTGLLSDSRSPFLGLRPPKLFPI 165
Query: 458 RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDS-LALATDSTFT 516
+ S RP + Y + + ++ + S +++ + +ALA ++
Sbjct: 166 VVRGKRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQCVEGVVALAGEALRI 225
Query: 517 FGTIDEIQKLHIRTV-PLGEAPRRIAYQESSQTFGVITT 554
F TI+ + + TV PL P + Q + VI +
Sbjct: 226 F-TIERLGETFNETVIPLRYTPMKFVLQPKRKLLVVIES 263
Score = 48.1 bits (113), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 1062 GRIIIFHY-DDGK-LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LE 1118
G I I+ + +DG+ L+ + + +++G ++ +F G+LLA I +R ++ + LR E
Sbjct: 363 GFIHIYRFLEDGRSLELLHKTQVEGVPLALSQFQGRLLAGIGPVLRFYDLGKRRLLRKYE 422
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTS 1172
F N I + ++ D I VGD S +Y+ E + D P W+T+
Sbjct: 423 NKLFPNTI-VSIQTYRDRIYVGDTQESFHYCKYRWDENQLYIFADDCVPRWLTA 475
>gi|24415580|gb|AAN41460.1| putative cleavage and polyadenylation specificity factor 160 kDa
subunit [Arabidopsis thaliana]
Length = 1442
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 30/182 (16%)
Query: 139 LGDSQLVKLNRSPDENGTY-----VSVMESFTNLAPIIDMV----------VVDLERQGQ 183
+G+ +L +PD + + +V +S N+ P+ D + +Q
Sbjct: 481 IGNEELSLFGSTPDNSDSAQKSFSFAVRDSLVNVGPVKDFAYGLRINADANATGVSKQSN 540
Query: 184 GQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPK--NLDNT------ 235
+LV CSG K G+L ++R I E ++LPG KGIW + S + N D++
Sbjct: 541 YELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADE 600
Query: 236 ------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAI 288
L++S T VL + E TE + +T GN+ R V+QV A
Sbjct: 601 DEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFEHGAR 660
Query: 289 LI 290
++
Sbjct: 661 IL 662
Score = 48.5 bits (114), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 26/151 (17%)
Query: 1030 LSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY----DDGK--LQQIAEKEIK 1083
++L+++ GE+ T +GTA V E+ + GR+++F + D+ + + ++ +E+K
Sbjct: 1117 VTLLNASTGEN-ETLLAVGTAYVQGEDVAAR-GRVLLFSFGKNGDNSQNVVTEVYSRELK 1174
Query: 1084 GACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALF---------LKVKG 1134
GA ++ G LL S + L +W N EL N +A F + V
Sbjct: 1175 GAISAVASIQGHLLISSGPKIILHKW-NGTEL--------NGVAFFDAPPLYVVSMNVVK 1225
Query: 1135 DFILVGDLMRSLTLLQYKTMEGSFEEISRDY 1165
FIL+GD+ +S+ L +K +++D+
Sbjct: 1226 SFILLGDVHKSIYFLSWKEQGSQLSLLAKDF 1256
Score = 43.1 bits (100), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 817 IRMEELE---IQDVQFLHGCQNPTIICIHQDVN---GR-HVKTHEISLKEKEFTKT---- 865
I + +LE ++D FLHG P I+ + ++ + GR K H L T
Sbjct: 239 INLRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCVLSALSINSTLKQH 298
Query: 866 --PWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVA 909
W N+ +A ++ VP P+GG +++ +I YHS + A+A
Sbjct: 299 PVIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALA 344
>gi|67472417|ref|XP_652013.1| splicing factor 3B subunit 3 [Entamoeba histolytica HM-1:IMSS]
gi|56468814|gb|EAL46625.1| splicing factor 3B subunit 3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449709507|gb|EMD48761.1| premRNA-splicing factor rse-1, putative [Entamoeba histolytica
KU27]
Length = 1145
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/390 (18%), Positives = 147/390 (37%), Gaps = 31/390 (7%)
Query: 164 FTNLAPIIDMVVV-DLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIK-GI 221
F +LAP+ID+ V Q ++ G + +++I++N + + I+LP I I
Sbjct: 391 FKSLAPLIDLKVAPATSSQDTTKMYAFCGKGNQSTIKILKNQLNTLDAVEIELPAIPISI 450
Query: 222 WALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQ 281
W L L +S+ T +L ++ E+ E + + T LQ
Sbjct: 451 WPLK-KETDEYHQYLAISYSNITTLLKITEDEMSECTTSPILLSTPSLLVSMLFDGTFLQ 509
Query: 282 VTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCAT----GCDVYYLEVHGSEI 337
V I+ S + ++ + SCN +++ + + Y + +
Sbjct: 510 VMTDRIIIYSEPIQQFITE-----DQKYVCASCNGCELIVSVEKNNQTSLIYFQYQSGHL 564
Query: 338 KQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL------PSLE 391
+ + ++ L + P+K A+G D S LLSL +L
Sbjct: 565 LTMERKDNLSKITALALDQF-------HPSKH--CAIGC-IDGSVHLLSLIPNETTKALS 614
Query: 392 EVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQP 451
V + I S+ + YL L +G + DP SG + + +G++P
Sbjct: 615 RVSLQTYECSI--NSLTFNIIDNTSYLFAGLSNGLLGRSVYDPISGEINESSLNFVGSRP 672
Query: 452 TVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALAT 511
L + +V A S R + Y + K+ + +N++ C + +++A+
Sbjct: 673 VTLSNVKDCGEDSVLAISGRSLLSYKNGTKIKTTPLNIQNTTLACGILVPFVDNAIAIIC 732
Query: 512 DSTFTFGTIDEI-QKLHIRTVPLGEAPRRI 540
+ TI+ L + + + PR++
Sbjct: 733 EKVMKIITIESTSSSLTGKNIQISYTPRKV 762
Score = 40.8 bits (94), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 8/156 (5%)
Query: 1043 TYFVLGTAVVHPEENEP---KQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLAS 1099
TY ++G V+ + P K I ++ ++ + +++ + EF G +LA
Sbjct: 835 TYLIIG--VIESYKTRPIQWKSSEIQVYSINERSINYCYSTKVEYPVRAFAEFKGMVLAG 892
Query: 1100 INSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSF 1158
+ + +RL++ + LR E F + IA L V G+ IL+ + L++Y + F
Sbjct: 893 VGNILRLYDIGLKSLLRKAEKRQFASDIAQ-LHVIGETILLTGVSDGFNLIRYNQINHKF 951
Query: 1159 EEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ 1194
+I D P W+ + L+ L ++ +F+ Q
Sbjct: 952 -DIYADSLPRWVVTAAPLNQSTVLASDKFGEIFMYQ 986
>gi|345563509|gb|EGX46509.1| hypothetical protein AOL_s00109g81 [Arthrobotrys oligospora ATCC
24927]
Length = 1295
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 169/463 (36%), Gaps = 100/463 (21%)
Query: 161 MESFTNLAPIIDMVVVDLE-------RQGQGQLVTCSGGFKEGSLRIIRNGI-----GIE 208
++ N +P+ DM +++L+ +G+L C+G + G++ +R+GI +
Sbjct: 445 IQEIFNWSPMFDMDILNLKTADRSNLSASRGRLYACTGFGEHGAIAEVRHGIECRPATVI 504
Query: 209 EH-----ACIDLPGIKG--------------IWALSIGSPKNLDNTLVLSFVGHTRVLTL 249
EH I LPG G +W L + D V+S V TL
Sbjct: 505 EHNEPVTKVIPLPGSAGTGCFVLLCLVLGTSLWYLPYNTLDASDAADVISLRIGDNVQTL 564
Query: 250 SGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQV-TPSAAILISTESKARVSSWEPPNGKS 308
+ V+ + T + VD +QV TP W+ P G
Sbjct: 565 TAGVVKGRAVQVTTEGVYSTTLNEVDVEADIQVPTPR-------------QEWDCPAGYG 611
Query: 309 ISVVSCNKNQVLCA----TGCDVYYLEV----HGSEIKQLAHRALEYEVAC----LDISP 356
I + + V+ +G ++ +E+ +G + + L R +++ LD
Sbjct: 612 IVSAALEGDTVVLVLKSESGYQLWNMELQPVSNGDQEEFLKKREEPLDISSQPTHLDFLN 671
Query: 357 LSNE----ETSSE------------PAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGG 400
+S + E SS +AQ++ + D P E VC GG
Sbjct: 672 ISGKSYLVEASSTLNLYELNPDGLLAPRAQISTTEIDEDPHCTQAQSPVCESVCLLESGG 731
Query: 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR-- 458
+ +LL L G +FY +D + K+V +G P VL
Sbjct: 732 KT--------------FLLCGLRHGYVFYGEIDTRTLEFNPLKRVKVGRLPVVLSVRDDT 777
Query: 459 -----SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAE----SYPDSLAL 509
+ ST ++F S + + S+ +VF+ + C L+ + +PD +
Sbjct: 778 PDKALAHSTFSLFQLSIEESELVVSS--VVFNQTVEPSIEAFCHLSHDFRSTQFPDPIIC 835
Query: 510 ATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVI 552
ATDS+ + + R + L E P RI Y E V+
Sbjct: 836 ATDSSIIVAMTSRMPTICTRQLELKETPSRIIYNEKEDLLAVV 878
>gi|50549733|ref|XP_502337.1| YALI0D02717p [Yarrowia lipolytica]
gi|74634908|sp|Q6CAH5.1|RSE1_YARLI RecName: Full=Pre-mRNA-splicing factor RSE1
gi|49648205|emb|CAG80525.1| YALI0D02717p [Yarrowia lipolytica CLIB122]
Length = 1143
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 180/468 (38%), Gaps = 57/468 (12%)
Query: 125 LTYLDNGVVFVGSRLGDSQLVKLNRSPDENGT-----------YVSVMESFTNLAPIIDM 173
LT L + + S GDS ++ D++ Y++V ++ L P+ D
Sbjct: 347 LTILKSAHMVCLSEQGDSHMMFFESLGDDDAPENVYDVISPSPYLTVTQTLFELKPVFDS 406
Query: 174 VV----VDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKG-IWALSIGS 228
VV + G V G L++I + + LP +W + G+
Sbjct: 407 VVGVNTTSSDHVGPVPNVLSLISATRGGLKLISHALKPSIIVASPLPEPPSKLWTMRDGA 466
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAI 288
D +VLS+ T VL + G V ET G T D+ T +CG+V V +T +
Sbjct: 467 --GSDKYIVLSYANATLVLEI-GDSVVETTSSGLTLDKPTLHCGSVGSSYVQVMTDGMNV 523
Query: 289 L-ISTESKAR---VSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRA 344
+ +S E + + W P+G+ I S + VL T Y+ + GSE+
Sbjct: 524 IPMSREGSSESLPATKWTAPSGQVICASSSSHQVVLGLTSSLFYFEDTPGSELSA----- 578
Query: 345 LEYEVACLDISPLSNEETSSEPA---KAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGE 401
Y+ A SP + + PA ++ AV D + R++S+ + G
Sbjct: 579 --YDGAYELSSPPTAVAVAPVPAGRVRSPFVAVAT-DDETVRIVSVDPESMFETVAVQGL 635
Query: 402 IIPRSILMTCFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKK------------VTLG 448
+ S L G YL + L +G LDP +G + VT G
Sbjct: 636 MATASSLALLSVGQVLYLHMGLANGVYVRVELDPLTGEIVGSWSKFVGLGRLSVVPVTCG 695
Query: 449 TQPTVLKTFRSLSTT--NVFACSDR--PTVIYSSNHKLVFS--NVNLRQVNHMCSLNAES 502
+ ++L + R + T +V A SD PT N F+ ++ ++ S + +
Sbjct: 696 GEESILVSSRGVKTCLGHVNATSDTWVPT---GGNSAPFFALDAISGEPLDLAHSFHTQD 752
Query: 503 YPDSLALATDSTFTFGTIDEIQKLHIRTVPL-GEAPRRIAYQESSQTF 549
P + ST T++ QK V L G A R I + ++ T
Sbjct: 753 CPHGVIGVAGSTLKIFTVNTAQKWTENEVKLEGTAKRLIQHDATTLTI 800
>gi|307191845|gb|EFN75271.1| Cleavage and polyadenylation specificity factor subunit 1
[Harpegnathos saltator]
Length = 1214
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y VLGT + E+ + GRI+IF + +QI KE KG ++ +
Sbjct: 890 YIVLGTNYNYGEDITSR-GRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPITAITQV 948
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
+G L+ ++ + +++ + + + I L +K IL+ D+ +S++LL+++
Sbjct: 949 SGFLVTAVGQKIYIWQLKDNDLVGIAFIDTQIYIHQMLSIKS-LILIADVYKSISLLRFQ 1007
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLG-----AENSYNLFICQKDS 1197
+ +SRD+ P + +IE L D LG E++ LF+ Q +S
Sbjct: 1008 EKCRTLSLVSRDFRPAEVYTIEYLIDNTNLGFLIADGESNLALFMYQPES 1057
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
+LVT SG K G+L +++ I + +LPG + +W + IGS N +
Sbjct: 304 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTV-IGSLNNDEQVKSETEGSHA 362
Query: 236 -LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDP-RTVLQVT 283
L+LS T VL +G E+ E + GF++ T + GN+ R ++QVT
Sbjct: 363 FLILSQEDSTMVLQ-TGQEINEVDQSGFSTQGSTVFAGNLGANRYIVQVT 411
Score = 42.4 bits (98), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 826 DVQFLHGCQNPTIICIHQDV---NGRHVKTHE------ISLK-EKEFTKTPWKQDNIEME 875
D+QFLHG PT++ +++ V +GR + ISL ++ W N+ +
Sbjct: 6 DLQFLHGYYEPTLLILYEPVRTFSGRIAVRQDTCAMVAISLNIQQRVHPIIWSVSNLPFD 65
Query: 876 ASLVIPVPEPLGGAIIIGQESILY 899
+PV +PLGG +I+ S++Y
Sbjct: 66 CYQAVPVKKPLGGTLIMAVNSLIY 89
>gi|350584885|ref|XP_003126937.3| PREDICTED: splicing factor 3B subunit 3-like [Sus scrofa]
Length = 425
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 93/204 (45%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ QL E A S+ +F + ++VL N ++ Y
Sbjct: 156 IQGNTLDLV---QLEQNEAAFSVAVCRFSNTGDDWYVLVGVAKDLILNPRSVAGGFVYTY 212
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 213 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 272
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 273 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 331
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 332 DKFGNICVVRLPPNTNDEVDEDPT 355
>gi|449296290|gb|EMC92310.1| hypothetical protein BAUCODRAFT_151722 [Baudoinia compniacensis
UAMH 10762]
Length = 1224
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 164/427 (38%), Gaps = 36/427 (8%)
Query: 156 TYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDL 215
T+ S+ L P++ V +L + Q+ G L+ +R+G+ I E L
Sbjct: 422 TFTSLAYDVPGLNPLMRTKVDNLTGEDAPQIYAIQGTGNSSVLKTMRHGLEINEIVSSPL 481
Query: 216 PGIK--GIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFYCG 272
++ +W+L + + + L+LS + + LS G EVE E F +++ T
Sbjct: 482 GNLQYDNLWSLKHRAVDDYHSYLLLSSGYGDKTIVLSIGDEVETMENSPFLTNRATITAN 541
Query: 273 NVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEV 332
+ T++QV + IL ES A ++ W P ++I S N Q+L
Sbjct: 542 QMGDATLVQVH-ARGILSVLESGA-LNEWPAPAHRTIVAASSNDRQLLLGLSSSELAFFF 599
Query: 333 HGSE--IKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP-- 388
G + + QL E I+ LS +T +A+ A VG D + R+ S+
Sbjct: 600 MGDDGVLNQLE----EMPEMSGKITALSVGQTPRGQQQAKYAVVGC-DDCTIRVYSIELE 654
Query: 389 ------SLEEVCKEPLGGEII----PRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGR 438
S++ + P E++ P S ++ Y+ + L G +D +G
Sbjct: 655 TALEPRSVQALSAVPTSIEVVEMLDPSSNVLVN-----YVHIGLQSGLYLRAVIDDVTGE 709
Query: 439 LTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSL 498
L + + LG +PT + + A S RP + Y++ + + QV
Sbjct: 710 LGEVRTRFLGARPTRIFPVEIAEEQGIVASSSRPWLGYNNKGTYTLTPLVTGQVEAARPF 769
Query: 499 NAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDI 558
E A+ S F +L V L PR + S + V
Sbjct: 770 VTEHLRGFCAVQGQSLLIFTLPTTDGRLSSSEVGLKYTPRAMTRHPYSPVWYV------- 822
Query: 559 QEADGST 565
++DG+T
Sbjct: 823 AQSDGNT 829
>gi|198457226|ref|XP_001360595.2| GA10080 [Drosophila pseudoobscura pseudoobscura]
gi|198135905|gb|EAL25170.2| GA10080 [Drosophila pseudoobscura pseudoobscura]
Length = 1459
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 61/271 (22%)
Query: 690 NLVVAKNNRIEIHTVTP-------EGLRP-------------VKEIFLYGKIAVMKFFRG 729
NLVVA N ++++ ++P + L P + FLYG + ++
Sbjct: 29 NLVVAGANMLKVYRISPNVEAGQRQKLNPNEMRIAPKMRLECLATYFLYGNVMSLQCVSL 88
Query: 730 PTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAII--DPE 787
+D L + + +L+ D L+ L+ + D G + + ++ DP+
Sbjct: 89 AGAMQDALLVSFKDAKLSVLQHDPDTYALKTLSLHYFEEEDIRGGWTGRYFVPVVRVDPD 148
Query: 788 ARVIGLRLYNGLFKIIPLEKDN----FEL-------KASS-------------IRMEELE 823
AR + +Y ++P KDN EL KA + I ++EL+
Sbjct: 149 ARCAVMLVYGKRLVVLPFRKDNSLDEIELTDVKPFKKAPTAMVSRTPIMASYLITLKELD 208
Query: 824 -----IQDVQFLHGCQNPTIICIHQDVN---GR-HVKTH-----EISLK-EKEFTKTPWK 868
+ D+QFLHG PT++ +++ V GR V++ ISL ++ W
Sbjct: 209 EKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSDTCVLVAISLNIQQRVHPIIWT 268
Query: 869 QDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
+++ + V P+ +P+GG +++ +++Y
Sbjct: 269 VNSLPFDCFQVYPIQKPIGGCLVMTVNAVIY 299
Score = 44.7 bits (104), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 160 VMESFTNLAPIIDMVV---VDLERQG-------------QGQLVTCSGGFKEGSLRIIRN 203
V +S N+API M V+ E G + +LV +G K G+L + N
Sbjct: 489 VCDSLINVAPINYMCAGERVEFEEDGTTLRPHAENLHDLKIELVAATGHSKNGALSVFVN 548
Query: 204 GIGIEEHACIDLPGIKGIW-----ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
I + +L G +W A S + + ++LS T VL +G E+ E E
Sbjct: 549 CINPQIITSFELDGCLDVWTVFDDATKKTSRHDQHDFMLLSQSNSTLVLQ-TGQEINEIE 607
Query: 259 MGGFTSDQQTFYCGNV-DPRTVLQVT 283
GFT +Q T + GN+ R ++QVT
Sbjct: 608 NTGFTVNQATIFVGNLGQQRFIVQVT 633
Score = 40.8 bits (94), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
KL+++ +KE KG ++ + G L+ + + +++ + + + N + + V
Sbjct: 1176 KLKEVFKKEQKGPVSAISDVLGFLVTGLGQKIYIWQLRDGDLIGVAFIDTNIYVHQIITV 1235
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
K I + D+ +S++LL+++ + SRD+NP + IE + D LG
Sbjct: 1236 KS-LIFIADVYKSISLLRFQEEHRTLSLASRDFNPLEVYGIEFMVDNSNLG 1285
>gi|390358535|ref|XP_789715.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Strongylocentrotus purpuratus]
Length = 1223
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 26/203 (12%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFHYD-------------DGKLQQIAEKEIKGACYSMC 1090
Y V+ T V+ E+ Q R ++ YD KL+ + EK KG ++C
Sbjct: 899 YVVVATTHVYSED---LQTRGSVYIYDCIEVVPEPGQPLTKNKLKPLYEKRQKGPVSALC 955
Query: 1091 EFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQ 1150
E G LL I V ++++ + + L I + VK FIL+ D+M+ LQ
Sbjct: 956 EVMGFLLTCIGQKVYMWQFKDNDLIGLAFIDTQIYIHNAVSVK-QFILITDVMKGAYFLQ 1014
Query: 1151 YKTMEGSFEEISRDYNPNWMTSIEILDDE---LFLGAENSYNLFICQKDSAATSDEDRTH 1207
Y+ + + +SRD P + E + D+ FL ++ NL + A +
Sbjct: 1015 YQAQDRTLSLVSRDARPLEIFGCEFMVDDKQMAFLVSDADKNLIVFHYHPEAPESHGGAY 1074
Query: 1208 LQEVGTVHLVGDGL-----VQCR 1225
L G ++ +G + V+CR
Sbjct: 1075 LLRRGDMN-IGSAVNTFVRVRCR 1096
Score = 48.5 bits (114), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 116/296 (39%), Gaps = 90/296 (30%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
+R L G +++L L +DG SV+ ++ + C+ + +G +F+GSRL
Sbjct: 114 DRLALSLKDGEIYVLTL----LVDGMRSVRGFHLDKAAASVLTTCICPMGDGFLFLGSRL 169
Query: 140 GDSQLVKLNRS--------------------------------------------PDE-- 153
G+S L+K PDE
Sbjct: 170 GNSLLLKYTEKVSETSPTDASKTEEPKPGEEPPTKKMRSDDASDWMASDTKFLDDPDELE 229
Query: 154 --------NGTYVS-----VMESFTNLAPIIDMVVVD---LERQGQG------QLVTCSG 191
GT ++ + +S N+ P +M++ + L + QG +LVT SG
Sbjct: 230 VYGKQVQKTGTQLTSYSFEICDSLLNIGPCGNMIMGEPAFLSEEFQGNVDPDLELVTTSG 289
Query: 192 GFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL--------------SIGSPKNLDNT-- 235
K G+L +++ I + +LPG +W + S SP++ D
Sbjct: 290 YGKNGALSVLQRTIRPQVVTTFNLPGCLDMWTVKSLKEAKADEKSEESEASPEDKDRHAF 349
Query: 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
L+LS + VL +G E+ E GGF++ T + N+ D R ++QV + L+
Sbjct: 350 LILSKQDSSMVLQ-TGQEITEVAAGGFSTQAPTIFASNMGDDRYIVQVMNKSICLM 404
>gi|440793679|gb|ELR14857.1| CPSF A subunit region protein [Acanthamoeba castellanii str. Neff]
Length = 1477
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 160 VMESFTNLAPIIDMVVVD---------LERQGQG--QLVTCSGGFKEGSLRIIRNGIGIE 208
V +S N+ PI D + + E++GQ ++VTCSG K GSL ++++G+ E
Sbjct: 531 VCDSLVNVGPITDFAIGESFDPASVSMAEQEGQRSVEIVTCSGQGKNGSLCVLQHGVRPE 590
Query: 209 -EHACIDLPGIKGIWAL------SIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGG 261
HA DL G K W L G L+LS TRV+ G + E
Sbjct: 591 LVHASADLAGCKAFWTLYHRSEERQGEEAEYHAYLLLSEEEQTRVIAGDGLDELSNEETD 650
Query: 262 FTSDQQTFYCGNVDPRT-VLQVTPSAAILIS-TESKARVSSWEPPNGKSISVVSCNKNQV 319
F T GN+ +T ++QV IL+ ++ R+S+ P + + ++ V
Sbjct: 651 FNVAAPTVDAGNLFEQTRIVQVHQHGLILLDGVKATQRIST---PGQIAAASIADPYVLV 707
Query: 320 LCATGC-DVYYLEVHGSEIKQ 339
L A G +Y+ + S++ Q
Sbjct: 708 LMADGALRLYFADPTSSKLVQ 728
Score = 49.3 bits (116), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 121/316 (38%), Gaps = 70/316 (22%)
Query: 626 FTSSTDLNLVVAKNNRIEI---HTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFI 682
FTS D+NL+VAK N +E+ H RP+ V+ RG K +
Sbjct: 23 FTSEDDINLIVAKTNVLEVYALHRHEDSKARPIDRQSTRPTDGVISL-RGEEPKDAPPYA 81
Query: 683 ITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQ 742
TQ + + LV++ + L+G I M R P KD L + +
Sbjct: 82 GTQHS-MRLVLSSS--------------------LFGNIESMAAVRFPGTSKDALLLSFR 120
Query: 743 RYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAI----IDPEARVIGLRLYNG 798
+LE DI ++ T + D K + I + +DP+ R + ++
Sbjct: 121 DAKISVLEF--DIATNDLRTISLHYFEDYKVKEGHDHYIHVPELRVDPQQRCAAMLAFDR 178
Query: 799 LFKIIP-------LEKDN-------------FELKASSIRMEELEIQDVQFLHGCQNPTI 838
++P +E +N +L+A I + ++D FL G PT+
Sbjct: 179 KLVVLPFRQHASLMEIENGGQEDQPVKPSFLLDLRAMGI----INVKDFVFLQGYYEPTL 234
Query: 839 ICIHQD---------VNGRHVKTHEISLK----EKEFTKTP--WKQDNIEMEASLVIPVP 883
+ +++ VN +SL + + P W + + + +I VP
Sbjct: 235 LILYEPTQTWSGRVAVNRNTCVAAAVSLNLWQHRGQTSAHPVVWSAEFLPYDTQRLIAVP 294
Query: 884 EPLGGAIIIGQESILY 899
P+GGA+ + S+LY
Sbjct: 295 GPIGGALALSTNSLLY 310
Score = 46.6 bits (109), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 28/183 (15%)
Query: 995 PADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHP 1054
P + M E H L +I T++ILH +L P E+ L+L K G++ + V+
Sbjct: 1122 PREIAMMEERHELHLISPRTWQILHHVELEPKEHVLTLSVLKLGDN--------YSQVNR 1173
Query: 1055 EENEPKQGRIIIFHYDDGKLQQ----------IAEKEIKGACYSMCEFNGKLLASINSTV 1104
E P ++I+ D +Q + EK +KG + G L+ ++ +
Sbjct: 1174 ELRPP---HLLIYEIDVTGEEQCKLTMAYQKPMKEKPMKGPVSAAASLQGYLIIAVGPKI 1230
Query: 1105 RLFEW---TNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEI 1161
+F + + E + H+ I++ +K +F+L GD+ +S+ L++K +
Sbjct: 1231 WVFNFDGGSTEAVAFYDAPHY--IVS--IKTLKNFVLCGDIYKSIFFLRWKDSASQLALL 1286
Query: 1162 SRD 1164
++D
Sbjct: 1287 AKD 1289
>gi|339253000|ref|XP_003371723.1| cleavage and polyadenylation specificity factor subunit 1
[Trichinella spiralis]
gi|316967988|gb|EFV52332.1| cleavage and polyadenylation specificity factor subunit 1
[Trichinella spiralis]
Length = 1376
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 121/293 (41%), Gaps = 60/293 (20%)
Query: 665 AVMKFFRGPTD-KKDLLFIITQRTDLNLVVAKNNRIEIHTVTPE-----------GLRPV 712
AV + PT K + TQ D +VVA ++ ++I+ + P GL P
Sbjct: 3 AVHRQTDAPTAVNKSMFGHFTQTDDWEVVVACDSYLKIYKLRPAKLTSDTMECGGGLCPT 62
Query: 713 K----EIFL----YGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKA 764
E+ L YG++A + R + D++ + +A + DI+ ++T +
Sbjct: 63 NLASFELVLSEQVYGRLASVAIARLTGFQLDVILLAID--DAKLSVVGYDIETHSLVTLS 120
Query: 765 HGNVSDRIGKPS----ENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN----------- 809
D + K E + +DPE R + +Y ++PL +++
Sbjct: 121 MHYYEDDLFKLGFTRFEIPPMLRMDPERRCAAMTIYGAHLVVLPLVRESLYESMNIVDPS 180
Query: 810 ------FELKASS-------IRMEELEIQDVQFLHGCQNPTIICIH---QDVNGRHVKTH 853
F L+ +S I + + D+ FLHG PT++ ++ Q GR V
Sbjct: 181 QRPGWPFSLRLTSYTVAFNAIDAKMHNVTDMCFLHGFYEPTVLLLYEPTQTTAGRVVVRQ 240
Query: 854 E------ISLKEKEFTKTP-WKQDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
+ +SL K+ T W N+ +A ++ +P+PLGG ++ SI+Y
Sbjct: 241 DTYQILAVSLNPKDKTHAVIWTLGNLPFDAFALLALPKPLGGVLLFSVNSIIY 293
>gi|356559917|ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Glycine max]
Length = 1447
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 111/294 (37%), Gaps = 90/294 (30%)
Query: 82 YLLGDLA------GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFV 135
+LL D+A G L +L L + ++ + + K +L +T + N + F+
Sbjct: 367 WLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSS-----GITTIGNSLFFL 421
Query: 136 GSRLGDSQLV-----------------------------KLNRSPDE------NGTYVS- 159
SRLGDS LV +L RSP + +G +S
Sbjct: 422 ASRLGDSMLVQFSCGSGVSMLSSNLKEEVGDIEADAPSKRLRRSPSDALQDMVSGEELSL 481
Query: 160 ------------------VMESFTNLAPIIDMV----------VVDLERQGQGQLVTCSG 191
V +S N+ P+ D + +Q +LV CSG
Sbjct: 482 YGSAPNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSG 541
Query: 192 GFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPK--NLDNT------------LV 237
K GSL ++R I E ++LPG KGIW + S + N D++ L+
Sbjct: 542 HGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTRSHNADSSKMADDDDEYHAYLI 601
Query: 238 LSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRT-VLQVTPSAAILI 290
+S T VL + E TE + +T GN+ R V+QV A ++
Sbjct: 602 ISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRCRVIQVYERGARIL 655
Score = 48.9 bits (115), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 25/138 (18%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYDDGK------LQQIAEKEIKGACYSMCEFNGKL 1096
T +GTA V E+ + GRI++F + ++ KE+KGA ++ G L
Sbjct: 1126 TLLAIGTAYVQGEDVAAR-GRILLFSLGKNTDNPQTLVSEVYSKELKGAISALASLQGHL 1184
Query: 1097 LASINSTVRLFEWTNEKELRLECSHFNNIIALF---------LKVKGDFILVGDLMRSLT 1147
L + + L +W N EL N IA F L + +FIL+GD+ +S+
Sbjct: 1185 LIASGPKIILHKW-NGTEL--------NGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIY 1235
Query: 1148 LLQYKTMEGSFEEISRDY 1165
L +K +++D+
Sbjct: 1236 FLSWKEQGAQLSLLAKDF 1253
Score = 47.8 bits (112), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 53/236 (22%)
Query: 779 GIIAIIDPEARVIGLRLYNGLFKIIP-------LEKDNFELKASS-----------IRME 820
G + +DP+ R G+ +Y+ I+ L ++ L +S I +
Sbjct: 176 GPVVKVDPQGRCGGVLIYDLQMIILKATQAGSGLVGEDDALGSSGAVAARIESSYMINLR 235
Query: 821 ELE---IQDVQFLHGCQNPTIICIHQD-------VNGRH----VKTHEISLKEKEFTKTP 866
+L+ ++D F+HG P ++ +H+ V+ +H + IS K+
Sbjct: 236 DLDMRHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLI- 294
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVA-----------PQIIKS 915
W N+ +A ++ VP P+GG ++I +I YHS + A+A +I +S
Sbjct: 295 WSAVNLPHDAYKLLAVPSPIGGVLVISANTIHYHSQSASCALALNSYAVTLDSSQEIPRS 354
Query: 916 STIVCYAKVDANGERYLLGDLA------GRLFMLLLEKEEKMDGTFSVKEPKVELL 965
S V ++DA +LL D+A G L +L L + ++ + + K +L
Sbjct: 355 SFNV---ELDAANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVL 407
>gi|238594622|ref|XP_002393535.1| hypothetical protein MPER_06713 [Moniliophthora perniciosa FA553]
gi|215461159|gb|EEB94465.1| hypothetical protein MPER_06713 [Moniliophthora perniciosa FA553]
Length = 239
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 1088 SMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSL 1146
++ F G+L+A + +R+++ +K LR +E F + I + L +G ILV D+ S+
Sbjct: 20 ALLGFQGRLVAGVGKALRIYDIGKKKLLRKVENKQFASAI-VALNTQGSRILVADMQESV 78
Query: 1147 TLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATS--DED 1204
+ YK E + D P W++++ ++D + N+F+ + D + D+D
Sbjct: 79 SFAVYKPPENRLLVFADDTQPRWISAMTMVDYNTVACGDRFGNIFVNRLDPKESDQVDDD 138
Query: 1205 RT 1206
T
Sbjct: 139 PT 140
>gi|49619065|gb|AAT68117.1| cleavage and polyadenylation specific factor 1 [Danio rerio]
Length = 1105
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y LGT ++ EE + GRI+I K + + EKE KG ++C
Sbjct: 782 YVALGTCLMQGEEVTCR-GRILILDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHC 840
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
+G L+++I + L+ + I +K +FIL D+M+S++LL+Y+
Sbjct: 841 SGFLVSAIGQKIFLWSLKYNDLTGMAFIDTQLYIHQMYSIK-NFILAADVMKSISLLRYQ 899
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFI 1192
+ +SRD P + SIE + D FL ++ NL +
Sbjct: 900 PESKTLSLVSRDAKPLEVYSIEFMVDNNQLGFLVSDRDKNLMV 942
Score = 43.1 bits (100), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 28/133 (21%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-------------------- 224
++V CSG K G+L +++ I + +LPG +W +
Sbjct: 155 EVVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCHDMWTVIYCEEKPEKPSAEGDGESPE 214
Query: 225 ------SIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPR 277
+I K L+LS T +L +G E+ E + GF + T Y GN+ D +
Sbjct: 215 EEKREPTIEDDKKKHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVYAGNIGDNK 273
Query: 278 TVLQVTPSAAILI 290
++QV+P L+
Sbjct: 274 YIIQVSPMGIRLL 286
>gi|154415772|ref|XP_001580910.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915132|gb|EAY19924.1| hypothetical protein TVAG_130320 [Trichomonas vaginalis G3]
Length = 928
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 16/148 (10%)
Query: 122 PECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQ 181
P L+ LD VF S+ G S ++ L S N Y E + ++ +D +R
Sbjct: 237 PLVLSVLDETTVFSFSKSGPSHVIHLVNS---NKPYAVAEEILFSQESSRILLQMDTKR- 292
Query: 182 GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFV 241
G V+ + +G+L IIR +G+ A +++ GI+ W L T V+SF+
Sbjct: 293 --GDFVSFA---PDGTLSIIRKTVGVRTEAEVEIHGIQKSWLLD-------QQTAVISFI 340
Query: 242 GHTRVLTLSGAEVEETEMGGFTSDQQTF 269
TR L +G E+ + G +D+ T
Sbjct: 341 DRTRALKYTGGEISIANVKGLITDESTL 368
>gi|296084122|emb|CBI24510.3| unnamed protein product [Vitis vinifera]
Length = 1448
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 53/236 (22%)
Query: 779 GIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFEL----------KASSIRMEE------- 821
G + +DP+ R G+ +Y I+ + + L A S R+E
Sbjct: 180 GPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVISLR 239
Query: 822 ----LEIQDVQFLHGCQNPTIICIHQD-------VNGRH----VKTHEISLKEKEFTKTP 866
++D F+HG P ++ +H+ V+ +H + IS K+
Sbjct: 240 DLDMKHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLI- 298
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVA-----------PQIIKS 915
W N+ +A ++PVP P+GG ++I SI YHS + A+A ++ +S
Sbjct: 299 WSAVNLPHDAYKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVSADNSQEMPRS 358
Query: 916 STIVCYAKVDANGERYLLGDLA------GRLFMLLLEKEEKMDGTFSVKEPKVELL 965
S V ++DA +L D+A G L +L L + ++ + + + +L
Sbjct: 359 SFSV---ELDAANATWLSNDVAMLSTKTGELLLLTLAYDGRVVHRLDLSKSRASVL 411
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIF----HYDDGK--LQQIAEKEIKGACYSMCEFNGKL 1096
T +GTA V E+ + GR+++F + D+ + + +I KE+KGA ++ G L
Sbjct: 1126 TLLAIGTAYVQGEDVAAR-GRVLLFSVGKNTDNSQNLVSEIYSKELKGAISAVASLQGHL 1184
Query: 1097 LASINSTVRLFEWTNEKELRLECSHFNNIIALF---LKVKGDFILVGDLMRSLTLLQYKT 1153
L + + L +WT + L F + L+ L + +FIL+GD+ RS+ L +K
Sbjct: 1185 LIASGPKIILHKWTGTE---LNGVAFFDAPPLYVVSLNIVKNFILLGDIHRSIYFLSWKE 1241
Query: 1154 MEGSFEEISRDY 1165
+++D+
Sbjct: 1242 QGAQLNLLAKDF 1253
Score = 48.1 bits (113), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 159 SVMESFTNLAPIIDMV----------VVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIE 208
SV +SF N+ P+ D + +Q +LV CSG K G+L I++ I E
Sbjct: 505 SVRDSFINVGPLKDFAYGLRINADPKATGIAKQSNYELVCCSGHGKNGALCILQQSIRPE 564
Query: 209 EHACIDLPGIKGIWALSIGSPK--NLDNT------------LVLSFVGHTRVLTLSGAEV 254
++LPG KGIW + + + N D+T L++S T VL +
Sbjct: 565 MITEVELPGCKGIWTVYHKNTRGHNADSTKMATKDDEYHAYLIISLESRTMVLETADLLG 624
Query: 255 EETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
E TE + T GN+ R V+QV A ++
Sbjct: 625 EVTESVDYYVQGCTISAGNLFGRRRVVQVYARGARIL 661
>gi|115471083|ref|NP_001059140.1| Os07g0203700 [Oryza sativa Japonica Group]
gi|113610676|dbj|BAF21054.1| Os07g0203700, partial [Oryza sativa Japonica Group]
Length = 666
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 413 EGHCYLLVALGDGSMFYFSLDPA---SGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACS 469
+GHC+ GS + S P S L +++ G P VL + ++
Sbjct: 101 KGHCF------PGSFYKESSTPCDDTSLMLIAVRRI--GITPVVLVPLHDRANADIIVLG 152
Query: 470 DRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIR 529
DRP ++ S+ H L +S+++ +H+ +++ P L +++ + ++L+ +
Sbjct: 153 DRPWLLQSARHSLAYSSISFLPASHVTPVSSTDCPSGLLFVSENCLHLVEMVHGKRLNAQ 212
Query: 530 TVPLGEAPRRIAYQESSQTFGVITT 554
+G PR++ Y S+T V+ T
Sbjct: 213 KFSIGGTPRKVLYHSDSRTLLVLRT 237
>gi|312077399|ref|XP_003141287.1| hypothetical protein LOAG_05705 [Loa loa]
Length = 316
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/131 (19%), Positives = 65/131 (49%), Gaps = 15/131 (11%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELE-----IQDVQFLHGCQNPTI 838
+DP R + ++ ++P +L + ++++ +++ + D+ FL G PT+
Sbjct: 140 VDPGQRCAAMLVFGRYLAVLPFNDSGAQLHSYTVQLSQIDSRLVNVVDMVFLDGYYEPTL 199
Query: 839 ICIHQDVN---GRHVKTHE------ISLKEKE-FTKTPWKQDNIEMEASLVIPVPEPLGG 888
+ +++ V GR ++ +SL KE + W+ N+ M+ + ++ +P P+GG
Sbjct: 200 LFLYEPVQTTCGRACVRYDTMCVLGVSLNVKEQVLASVWQLTNLPMDCNQILAIPRPVGG 259
Query: 889 AIIIGQESILY 899
+++ ++Y
Sbjct: 260 ILLVATNELIY 270
>gi|224120960|ref|XP_002318462.1| predicted protein [Populus trichocarpa]
gi|222859135|gb|EEE96682.1| predicted protein [Populus trichocarpa]
Length = 1455
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYDDGK------LQQIAEKEIKGACYSMCEFNGKL 1096
T +GTA V E+ + GRI++F + ++ KE+KGA ++ G L
Sbjct: 1133 TLLAVGTAYVQGEDVAAR-GRILLFSVVKNPENSQILVSEVYSKELKGAISALASLQGHL 1191
Query: 1097 LASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG 1156
L + + L +WT + + S + + L + +FIL+GD+ +S+ L +K
Sbjct: 1192 LIASGPKIILHKWTGTELTGVAFSDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGA 1251
Query: 1157 SFEEISRDYNPNWMTSIEILDD 1178
+++D+ S E L D
Sbjct: 1252 QLSLLAKDFASLDCFSTEFLID 1273
Score = 49.3 bits (116), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 97/232 (41%), Gaps = 45/232 (19%)
Query: 779 GIIAIIDPEARVIGLRLYNGLFKIIPL---------EKDNFELKASS---------IRME 820
G + +DP+ R G+ +Y+ I+ ++D F A+ I +
Sbjct: 180 GPLVKVDPQGRCGGVLVYDLQMIILKAAQAGSALVQDEDAFGSGAAISAHIASSYIINLR 239
Query: 821 ELEIQDVQ---FLHGCQNPTIICIHQ---DVNGRHVKTHEI----SLKEKEFTKTP---W 867
+L+++ V+ F+H P ++ +H+ GR V H +L K P W
Sbjct: 240 DLDMKHVKDFIFVHDYIEPVVVVLHERELTWAGRVVWKHHTCMISALSISTTLKQPTLIW 299
Query: 868 KQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSST--------IV 919
N+ +A ++ VP P+GG ++IG +I YHS + A+A +S
Sbjct: 300 SIGNLPHDAYKLLAVPSPIGGVLVIGVNTIHYHSESASCALALNSYAASVDSSQELPRAT 359
Query: 920 CYAKVDANGERYLLGDLA------GRLFMLLLEKEEKMDGTFSVKEPKVELL 965
++DA +LL D+A G L +L L + ++ + + K +L
Sbjct: 360 FSVELDAANATWLLKDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVL 411
Score = 47.8 bits (112), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 24/156 (15%)
Query: 159 SVMESFTNLAPIIDMV----------VVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIE 208
+V +S N+ P+ D + +Q +LV CSG K G+L +++ I E
Sbjct: 509 TVRDSLINVGPLKDFAYGLRINADANATGISKQSNYELVCCSGHGKNGALCVLQQSIRPE 568
Query: 209 EHACIDLPGIKGIW-------------ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVE 255
++LPG KGIW +L + S L++S T VL + E
Sbjct: 569 MITEVELPGCKGIWTVYHKNARIHSVDSLKMASDDEYHAYLIISMEARTMVLETADHLTE 628
Query: 256 ETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
TE + +T GN+ R V+QV A ++
Sbjct: 629 VTESVDYFVQGRTIAAGNLFGRRRVVQVFERGARIL 664
>gi|294654658|ref|XP_456718.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
gi|218511767|sp|Q6BYK1.2|RSE1_DEBHA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|199429049|emb|CAG84677.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
Length = 1256
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 35/222 (15%)
Query: 1009 IIDQNTFEILHAHQLFPGEYALSLISSKFGED-------------------PNTYF--VL 1047
+ID N EI+ +L E A+SL +F PN+Y L
Sbjct: 885 VIDFNNQEIVQTIELPKNESAISLCRLQFESQQTKNQEYLIIGTTQDQKFLPNSYSNNYL 944
Query: 1048 GTAVVHPEENEPK-QGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRL 1106
T ++ N+ K Q I+ F + + E+ ++ FNG+LL +++ +RL
Sbjct: 945 YTFTINKSSNKNKSQNEILEF---------VHKTELDYQPTAIIPFNGRLLVGMSNFLRL 995
Query: 1107 FEWTNEKELRLECS---HFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISR 1163
++ + LR S + NII L + G I+VGD S T ++Y + E F +
Sbjct: 996 YDLGQRQLLRKASSNIEYLKNIIRLTHQ-GGSRIVVGDSSMSTTFVKYDSTENQFIPFAD 1054
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDR 1205
D +T++ LD + +G + N+F+ + + D+
Sbjct: 1055 DIMKRQITALVTLDYDTIIGGDKFGNIFVSRVPETISQQSDK 1096
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 140/346 (40%), Gaps = 31/346 (8%)
Query: 153 ENGTYVSVMESFTNLAPIIDMVVVDLER----QGQGQLVTCSGGFKEGSLRIIRNGIGIE 208
EN V +ME+ L PI D +++ R QL S L+ + +GI
Sbjct: 404 ENLALVDIMET---LNPITDGALIETLRPEVPDPFKQLTALSS---HSYLKTLTHGISTN 457
Query: 209 EHACIDLPGIK--GIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSD 265
LP IK I I + D LV+S ++ L LS G VEE F ++
Sbjct: 458 TVVSSPLP-IKPTAIHTTRIFAESANDEYLVISSTLSSQTLVLSIGEVVEEVNDSQFVTN 516
Query: 266 QQTFYCGNVDPRTVLQVTPSAAILISTESK-----ARVSSWEPPNGKSISVVSCNKNQVL 320
+ T V +V+Q+ + I + + + W PP G SI S N QV+
Sbjct: 517 EPTINVQQVGKSSVVQIYSNGIRHIKHTMRNDTIEKKYTDWYPPAGISIIQASTNNEQVI 576
Query: 321 CA-TGCDVYYLEV--HGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377
+ ++ Y E+ H ++ + R LE + +S+ S K+ A VG
Sbjct: 577 IGLSNREICYFEIDPHDDQLVEYQER-LEMSGGSISALAISSSSISKLQRKSSYAIVGC- 634
Query: 378 TDISARLLSLPS---LEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDP 434
+D + + +SL LE V + L SI M + + + +G ++D
Sbjct: 635 SDETIQAISLKPHNCLEIVTLQALSAN--SSSIAMVPHGYSTSVHIGMENGLYVRVTIDE 692
Query: 435 ASGRLTDKKKVTLGTQPTVLKT--FRSLSTTNVFACSDRPTVIYSS 478
+G+L+D + LG++P L L + A S RP + Y S
Sbjct: 693 ITGKLSDTRIQFLGSKPVQLSVIGLPQLQQNGLLAISSRPWIGYYS 738
>gi|225455571|ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Vitis vinifera]
Length = 1442
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 53/236 (22%)
Query: 779 GIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFEL----------KASSIRMEE------- 821
G + +DP+ R G+ +Y I+ + + L A S R+E
Sbjct: 180 GPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVISLR 239
Query: 822 ----LEIQDVQFLHGCQNPTIICIHQD-------VNGRH----VKTHEISLKEKEFTKTP 866
++D F+HG P ++ +H+ V+ +H + IS K+
Sbjct: 240 DLDMKHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLI- 298
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVA-----------PQIIKS 915
W N+ +A ++PVP P+GG ++I SI YHS + A+A ++ +S
Sbjct: 299 WSAVNLPHDAYKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVSADNSQEMPRS 358
Query: 916 STIVCYAKVDANGERYLLGDLA------GRLFMLLLEKEEKMDGTFSVKEPKVELL 965
S V ++DA +L D+A G L +L L + ++ + + + +L
Sbjct: 359 SFSV---ELDAANATWLSNDVAMLSTKTGELLLLTLAYDGRVVHRLDLSKSRASVL 411
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIF----HYDDGK--LQQIAEKEIKGACYSMCEFNGKL 1096
T +GTA V E+ + GR+++F + D+ + + +I KE+KGA ++ G L
Sbjct: 1120 TLLAIGTAYVQGEDVAAR-GRVLLFSVGKNTDNSQNLVSEIYSKELKGAISAVASLQGHL 1178
Query: 1097 LASINSTVRLFEWTNEKELRLECSHFNNIIALF---LKVKGDFILVGDLMRSLTLLQYKT 1153
L + + L +WT + L F + L+ L + +FIL+GD+ RS+ L +K
Sbjct: 1179 LIASGPKIILHKWTGTE---LNGVAFFDAPPLYVVSLNIVKNFILLGDIHRSIYFLSWKE 1235
Query: 1154 MEGSFEEISRDY 1165
+++D+
Sbjct: 1236 QGAQLNLLAKDF 1247
Score = 48.5 bits (114), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 159 SVMESFTNLAPIIDMV----------VVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIE 208
SV +SF N+ P+ D + +Q +LV CSG K G+L I++ I E
Sbjct: 499 SVRDSFINVGPLKDFAYGLRINADPKATGIAKQSNYELVCCSGHGKNGALCILQQSIRPE 558
Query: 209 EHACIDLPGIKGIWALSIGSPK--NLDNT------------LVLSFVGHTRVLTLSGAEV 254
++LPG KGIW + + + N D+T L++S T VL +
Sbjct: 559 MITEVELPGCKGIWTVYHKNTRGHNADSTKMATKDDEYHAYLIISLESRTMVLETADLLG 618
Query: 255 EETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
E TE + T GN+ R V+QV A ++
Sbjct: 619 EVTESVDYYVQGCTISAGNLFGRRRVVQVYARGARIL 655
>gi|452845193|gb|EME47126.1| hypothetical protein DOTSEDRAFT_69180 [Dothistroma septosporum
NZE10]
Length = 1223
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 131/321 (40%), Gaps = 25/321 (7%)
Query: 167 LAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIE---EHACIDLPGIKGIWA 223
L P++ V +L + Q+ G + + IR+G+ +E ++ ++P IW
Sbjct: 433 LHPLLKTKVDNLTNEDAPQIYAIQGTGNKSQFKTIRHGLDVEVLINNSMGNVP-YDNIWT 491
Query: 224 LSIGSPKNLDNTLVLSF-VGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQV 282
S + L+LS G + G VE+ E F ++ T + + T++QV
Sbjct: 492 FKHRSSDDHHKYLLLSSSYGDLTIACSIGDSVEQIESSPFLENRATVHAQQMGDATLVQV 551
Query: 283 TPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSE--IKQL 340
+ I ES A + W+ P +++ V S N+ Q+L A G + + QL
Sbjct: 552 H-ARGIRSILESGAH-NEWQSPAHRTVVVASANERQLLLALSSAELAFFFMGDDGILNQL 609
Query: 341 AHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL---PSLEEVCKEP 397
E I+ LS +T +A+ A VG D + R+LS+ LE +
Sbjct: 610 E----EMPEMSGKITALSVGQTPRGRQQARYAVVGC-DDCTIRVLSIELDSPLEPRSVQA 664
Query: 398 LGGEIIPRSI----LMTCFEGHCYLLVALGDGSMFYFS--LDPASGRLTDKKKVTLGTQP 451
L IP S+ ++ +V +G S Y +D +G L D + LGTQP
Sbjct: 665 LSA--IPTSLEVVEMLDPASNTIVNVVHIGLQSGLYLRAIIDETTGELGDVRTKFLGTQP 722
Query: 452 TVLKTFRSLSTTNVFACSDRP 472
L + ACS RP
Sbjct: 723 PRLCPVEVNDQDCILACSSRP 743
Score = 41.2 bits (95), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Query: 1070 DDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLE--CSHFNNIIA 1127
D KL+ + + + Y++ FNG+L + + + +++ + LR + N I++
Sbjct: 939 DGTKLEFVHKTKFDLPVYTVLAFNGRLALGVGNELFIYDMGIKAMLRKARGTATPNQIVS 998
Query: 1128 LFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENS 1187
L + +G+ I+ GD+ +T + YK D W T ++D E G +
Sbjct: 999 L--EAQGNRIVCGDVSEGITYVVYKPKFNRMIPFVDDVVQRWTTCTTMVDYETAAGGDKF 1056
Query: 1188 YNLFI--CQKDSAATSDED 1204
NL++ C + + +DE+
Sbjct: 1057 GNLWVVRCPEQPSQEADEE 1075
>gi|156841606|ref|XP_001644175.1| hypothetical protein Kpol_1059p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156114812|gb|EDO16317.1| hypothetical protein Kpol_1059p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 1346
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 149/366 (40%), Gaps = 50/366 (13%)
Query: 123 ECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVS-----VMESFTNLAPIIDMVVVD 177
E + L NG +F S GD+ L + S E T + V + F + ++ +
Sbjct: 371 EKMHILKNGYLFSNSEFGDNYLFQF-ESLGEGETLSTSKSSEVSKQFERSETLENLRIES 429
Query: 178 LERQGQGQLVTCSGG--------FKEGSLRIIRNGIGIEEHACIDLPGIKG-IWALSIGS 228
++ + +C E +L++ ++G+ +LP G +W++ +
Sbjct: 430 TQKNANPIISSCITNDCPLTIMVRSENNLKLYKSGVNFNTMISTNLPSSPGKLWSIRL-- 487
Query: 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTF--------YCGNVDPRTVL 280
N + L F+G + LT+ EV++ + D+ F + G + R+++
Sbjct: 488 --NCNVYHKLLFLGFQKSLTI--LEVDDDSIEELRIDKNPFNLNKDLTIFVGAIGERSII 543
Query: 281 QVTPSAA--ILISTESKARVS--SWEPPNGKSISVVSCNKNQ-VLCATGCDVYYLEV--- 332
QV + I+ + + VS W PP G I S K+Q VL + C++ Y E+
Sbjct: 544 QVCENEVRQIVYDKDQQTYVSKLDWYPPAGIRIVCASSTKSQLVLALSNCEIVYFEIEVD 603
Query: 333 -HGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP-SL 390
+ +L RA D+ L + S +++ AVGL + ++LSL +
Sbjct: 604 SQNDSLNELQSRA--------DMGDLITSISLSNTNRSEYLAVGLKNSL-VKILSLSLND 654
Query: 391 EEVCKEPLGGEIIPRSIL-MTCFEG-HCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLG 448
E E + + + S+ + +G L V L DG L G++ D + +G
Sbjct: 655 TETFFEVVSIQAVMSSVSDIRIIQGLDMELHVGLKDGVYLRSKLSVTDGQIYDIRTKYMG 714
Query: 449 TQPTVL 454
+P +
Sbjct: 715 PEPVLF 720
>gi|344231825|gb|EGV63707.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
gi|344231826|gb|EGV63708.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
Length = 991
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Query: 1067 FHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECS---HFN 1123
F Y ++ + + E++ S+ EFNG+LL +++ +R ++ ++ LR + H N
Sbjct: 718 FLYTFKDMKLVHKTEVEMPPRSILEFNGRLLVGMDNLLRTYDLGKKQLLRKSSTAIKHIN 777
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
II + + K D I+VGD S ++ +E SF IS D +TS+ LD + +G
Sbjct: 778 KIIRIVYQGK-DRIVVGDSNNSTIFCKF--IENSFVPISDDTMNRQITSLSTLDYDTVIG 834
Query: 1184 AENSYNLFI 1192
+ N+F+
Sbjct: 835 GDKFGNVFV 843
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 171/405 (42%), Gaps = 46/405 (11%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
Y++ L F+LL + + F V ++ G + + + NG ++ +
Sbjct: 246 YVIHKLKNDFFVLL---QNEFGDLFKVDTDQINYFGHLPVSVAINIFKNGHLYANCSNTN 302
Query: 142 SQL-----VKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEG 196
+K++RS +N + ++++ +L PI+D+ + D L+T +
Sbjct: 303 KLYCQITGLKVSRSTSDNLENLELVQTIESLDPILDIKLKD------SHLITANST---- 352
Query: 197 SLRIIRNGIGIEEHACIDLPGIK-GIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVE 255
S++ + +G+ LP I+ + D LV+S T VL++ G EV
Sbjct: 353 SVKTLVHGVPTTTIVESPLPSSPLKIFTTKLTRDDVNDAYLVIS-SSETSVLSI-GEEVA 410
Query: 256 ETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCN 315
E F+ D T V ++QV + I+ E +V+ W PP G +I S N
Sbjct: 411 EVTDSKFSKDP-TILVQQVGKMALIQVYSNGIKHINGE---KVTDWFPPAGINIIKASSN 466
Query: 316 KNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAV 374
Q++ T +V Y EV + QL + E+ +I+ L A ++ AV
Sbjct: 467 NQQLIIGLTNNEVIYFEVDVDD--QLVEYQDKVELPT-NITAL---------AISKDFAV 514
Query: 375 GLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDP 434
D + +++SL ++ C E L +++ + F + + + +G ++D
Sbjct: 515 AGCADETVQVISLK--QQNCLEILSMQMLSSNSSAIEFSEQ-EVHIGMENGLFVRTNID- 570
Query: 435 ASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSN 479
A G+L++ + LGT+P L ++ A S +P V + +N
Sbjct: 571 ARGKLSNTRVKYLGTKPIRLSKIND----SILAISSKPWVGFKTN 611
>gi|30696088|ref|NP_199979.2| cleavage and polyadenylation specificity factor subunit 1
[Arabidopsis thaliana]
gi|290457637|sp|Q9FGR0.2|CPSF1_ARATH RecName: Full=Cleavage and polyadenylation specificity factor
subunit 1; AltName: Full=Cleavage and polyadenylation
specificity factor 160 kDa subunit; Short=AtCPSF160;
Short=CPSF 160 kDa subunit
gi|332008729|gb|AED96112.1| cleavage and polyadenylation specificity factor subunit 1
[Arabidopsis thaliana]
Length = 1442
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 107/287 (37%), Gaps = 84/287 (29%)
Query: 83 LLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDS 142
LL +G L +L L + + + + K +L +T + N + F+GSRLGDS
Sbjct: 381 LLSTKSGELLLLTLIYDGRAVQRLDLSKSKASVLASD-----ITSVGNSLFFLGSRLGDS 435
Query: 143 QLVKLN------------RSPDEN---------------GTY------------------ 157
LV+ + R DE+ T+
Sbjct: 436 LLVQFSCRSGPAASLPGLRDEDEDIEGEGHQAKRLRMTSDTFQDTIGNEELSLFGSTPNN 495
Query: 158 ---------VSVMESFTNLAPIIDMV----------VVDLERQGQGQLVTCSGGFKEGSL 198
+V +S N+ P+ D + +Q +LV CSG K G+L
Sbjct: 496 SDSAQKSFSFAVRDSLVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGAL 555
Query: 199 RIIRNGIGIEEHACIDLPGIKGIWALSIGSPK--NLDNT------------LVLSFVGHT 244
++R I E ++LPG KGIW + S + N D++ L++S T
Sbjct: 556 CVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEART 615
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
VL + E TE + +T GN+ R V+QV A ++
Sbjct: 616 MVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFEHGARIL 662
Score = 48.5 bits (114), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 26/151 (17%)
Query: 1030 LSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY----DDGK--LQQIAEKEIK 1083
++L+++ GE+ T +GTA V E+ + GR+++F + D+ + + ++ +E+K
Sbjct: 1117 VTLLNASTGEN-ETLLAVGTAYVQGEDVAAR-GRVLLFSFGKNGDNSQNVVTEVYSRELK 1174
Query: 1084 GACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALF---------LKVKG 1134
GA ++ G LL S + L +W N EL N +A F + V
Sbjct: 1175 GAISAVASIQGHLLISSGPKIILHKW-NGTEL--------NGVAFFDAPPLYVVSMNVVK 1225
Query: 1135 DFILVGDLMRSLTLLQYKTMEGSFEEISRDY 1165
FIL+GD+ +S+ L +K +++D+
Sbjct: 1226 SFILLGDVHKSIYFLSWKEQGSQLSLLAKDF 1256
Score = 43.1 bits (100), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 817 IRMEELE---IQDVQFLHGCQNPTIICIHQDVN---GR-HVKTHEISLKEKEFTKT---- 865
I + +LE ++D FLHG P I+ + ++ + GR K H L T
Sbjct: 239 INLRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCVLSALSINSTLKQH 298
Query: 866 --PWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVA 909
W N+ +A ++ VP P+GG +++ +I YHS + A+A
Sbjct: 299 PVIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALA 344
>gi|452825139|gb|EME32137.1| cleavage and polyadenylation specificity factor subunit-like protein
[Galdieria sulphuraria]
Length = 1454
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 1026 GEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFH-------------YDDG 1072
E A+S S P V+GT + E+ + GR+++F +
Sbjct: 1104 AEAAISQSSRSIKFKPKECIVIGTGFIKGEDAGTR-GRLMLFEVARQEAYTEESGAFSAI 1162
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALF--- 1129
+L IAEKE+K S+ G + ++ V +++ NE E L C F + LF
Sbjct: 1163 QLMLIAEKELKSVVSSIARLEGYICCAVGPKVEIYKLVNESE--LVCCSFYSGFQLFSTS 1220
Query: 1130 LKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL---DDELFLGAEN 1186
+ ++ VGD+ + L ++ S + +D++P S E L + LF+ ++N
Sbjct: 1221 INTVKQYVFVGDMYKGGYFLFWRDRNKSLNFLGKDFDPVQTLSTEFLILNEFILFVVSDN 1280
Query: 1187 SYNLFICQ 1194
NL + +
Sbjct: 1281 FGNLHLLE 1288
>gi|428186188|gb|EKX55039.1| hypothetical protein GUITHDRAFT_160593 [Guillardia theta CCMP2712]
Length = 2290
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 104/267 (38%), Gaps = 45/267 (16%)
Query: 162 ESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGI 221
++ TN+ PI + ++ +LVT SGG + G L +++ + + LP + +
Sbjct: 593 DTLTNIGPIGSRLDAGAVKKDSVELVTASGGLQYGKLGVLQRSLNPVVMTAVPLPDAQAV 652
Query: 222 WALSIGSPK------------------NLDNTLVLSFVGHTRVLTLSGAEVE---ETEMG 260
W + + K + +V+S + L G E+E E E
Sbjct: 653 WTVFGPTAKAADEDMEEDGNEEEEQSAGMHAYMVISQGNDKGTIVLKGRELEEFDEDEQV 712
Query: 261 GFTSDQQTFYCGNV-DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319
F D +T GN+ + ++QVTP +++ P + + VV+ N Q+
Sbjct: 713 DFEVDAKTVCVGNIFGNQRIVQVTPWNVYVLNG----------PRKEQELPVVAGNGLQI 762
Query: 320 LCATGCDVYYL-------------EVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEP 366
+ A D Y + ++ ++H AC + P+ + E + +P
Sbjct: 763 VAAYIRDPYIALILQDGRLNLLVGDASSMQVNYVSHEIHNITAACFFLDPIPDGEANDDP 822
Query: 367 AKAQLAAVGLWTDISARLLSLPSLEEV 393
+ + + +L +LPSLE V
Sbjct: 823 QQRDVMLAAAPRNGHFQLYTLPSLELV 849
Score = 40.8 bits (94), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 54/286 (18%), Positives = 115/286 (40%), Gaps = 62/286 (21%)
Query: 652 LRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRTDLNLVVAKNN-----RIEIHTVTP 706
L+ V L G + M F R P +D LF++ + L+++ N+ + +H
Sbjct: 78 LQCVGRYDLNGNVESMAFVRLPGRNRDHLFLVFRDAKLSILEYDNSIDDIVNVSLHLFED 137
Query: 707 EGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRG-DID-NLEILTK- 763
+ +R K +G+ +++ P + L + + + + +G D++ + EILT+
Sbjct: 138 DEIR--KGRVSFGRAPLLRV--DPLQRCAALLVYESKMVVIPFKHKGSDLEEDDEILTQP 193
Query: 764 --------AHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKAS 815
A N R+G PS+N + G+ ++ D +K
Sbjct: 194 NKKFKSESASSNTVTRLGAPSDNKL-----------------GILPTYVVDLDEAGIK-- 234
Query: 816 SIRMEELEIQDVQFLHGCQNPTIICIHQDVN---GR--------HVKTHEISLKEKEFTK 864
+ D FL G PTI +H++ GR + T +++ ++ +
Sbjct: 235 -------HVVDFTFLDGYYEPTISFLHENSRTWAGRLAVSNFTGMITTVSLNISQR---R 284
Query: 865 TP--WKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAV 908
P W + + ++ +P P GG +++ +++Y + + A+
Sbjct: 285 QPIIWSASKLPHNSRHIVALPAPAGGVVVVSSNALIYRNHEQKCAL 330
>gi|443684051|gb|ELT88095.1| hypothetical protein CAPTEDRAFT_161045 [Capitella teleta]
Length = 1410
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 103/260 (39%), Gaps = 50/260 (19%)
Query: 690 NLVVAKNNRIEIHTVTPEG------------------LRPVKEIFLYGKIAVMKFFRGPT 731
NLV A N+I ++ + E L V + L G ++ ++
Sbjct: 29 NLVTAGVNQIRVYRLVAESKPVEKESHTTETKSAKQKLECVADYELCGNVSSIESISLVG 88
Query: 732 DKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGII---AIIDPEA 788
+D L + + + + D D+L+ ++ + +D + G+ +DPE
Sbjct: 89 AARDALLLCFEEAKLSLCDYDPDTDDLKTISLHYFEDADLENGCCQRGLHHSEVRVDPEG 148
Query: 789 RVIGLRLYNGLFKIIPLEKDN--FELKASS------------IRMEELE-----IQDVQF 829
R + +Y ++P K++ E+ A+S I + L+ + D+QF
Sbjct: 149 RCAVMLIYGTHLIVLPFRKESPSDEIDATSCASKSPIMSTYIIDLRTLDERVTNVVDIQF 208
Query: 830 LHGCQNPTIICIHQD---------VNGRHVKTHEISLKEKEFTK-TPWKQDNIEMEASLV 879
LHG PT++ +++ V ISL ++ T W N+ +
Sbjct: 209 LHGYYEPTVLILYEPLPTWTCRVAVRKDTCSIVAISLNLQDKTHPIIWSHSNLPYDCLRT 268
Query: 880 IPVPEPLGGAIIIGQESILY 899
PVP+P+GG I+ S+LY
Sbjct: 269 FPVPKPIGGVIVFAVNSLLY 288
Score = 47.8 bits (112), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
+LVT SG K G++ I++ I + +LPG +W + +GSP +
Sbjct: 497 ELVTTSGYGKNGAISILQRQIRPQVVTTFELPGCTDVWTV-LGSPDEQQGSDEKLAGSHA 555
Query: 236 -LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
L+LS + VL +G E+ E + GF +D T + N+ + R ++QV P+A L+
Sbjct: 556 FLLLSRADSSMVLE-TGQEIMELDHSGFCTDAPTVHAANIGNGRYIVQVGPNAIWLL 611
>gi|407039323|gb|EKE39583.1| CPSF A subunit region protein, putative [Entamoeba nuttalli P19]
Length = 1108
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 165/404 (40%), Gaps = 41/404 (10%)
Query: 157 YVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP 216
Y ++ S ++ P+ + VVD Q + G SL+I+ +G+ +E + L
Sbjct: 338 YFNISTSISSHHPLTSIDVVDSHEVLQIRAFVGKGS--RSSLKILTHGLNPDECMSLSLQ 395
Query: 217 GIKGIWALSIGSPKN--LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV 274
+ IW L P N +V+ T VL +++ G + QT + G
Sbjct: 396 HPRNIWTLK---PYNEQTHQYVVIGLENQTYVLKTLPDALKQCPECGIRPNVQTLHAGMF 452
Query: 275 DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-----TGCDVYY 329
T++Q+ I I E ++S +P ++I V + + QV+ A + C++ Y
Sbjct: 453 IDGTLVQIHAHGIITILNE---KLSEQDPGAQRTILVGTSSSCQVVIALKNAQSKCEIVY 509
Query: 330 LEVHGSEIKQLA---HRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLS 386
E + +E K+LA R + + + + N KA+ A + + A +L+
Sbjct: 510 FE-YNTETKKLAEVERRIIRSNIIAMALGDFEN-------GKAKKVAY-ICDNGMANILT 560
Query: 387 L---PSLEEVCKEPLGGEIIPRSILMTCF----EGHCYLLVALGDGSMFYFSLDPASGRL 439
L ++ + + E SI++T F E +L + + DG + + + + L
Sbjct: 561 LEKESKFLQILETNITVEGEAESIVLTQFNEISEPFLFLGIGMKDGCCYGYKVIGKNSEL 620
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN 499
K +GT P V + V S +YS ++ F+ ++ + + +
Sbjct: 621 MWCK--LIGTDPVVFGQYEFGGNIGVIMSSSTMIFMYSYFSRIEFTPISYQPLKALAPFI 678
Query: 500 AESYPDSLALATDSTFT---FGTIDEIQKLHIRTVPLGEAPRRI 540
+ +S+A T+ T G++D+ + PL PR++
Sbjct: 679 TDFSGESIAGITNDELTVIAIGSLDD--RFTYDEQPLLYTPRKV 720
>gi|255712143|ref|XP_002552354.1| KLTH0C02904p [Lachancea thermotolerans]
gi|238933733|emb|CAR21916.1| KLTH0C02904p [Lachancea thermotolerans CBS 6340]
Length = 1288
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 135/320 (42%), Gaps = 28/320 (8%)
Query: 146 KLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGI 205
KL P E +S+++ F P++ VV G L S ++ +L + G+
Sbjct: 408 KLKLRPVEELQNLSLLDQFRGSNPVLSQKVV-----GTTPLTILSQ--QKNTLETLTTGV 460
Query: 206 GIEEHACIDLP-GIKGIWALSIGSPKNLDNTLV-LSFVGHTRVLTLSGAEVEETEMGG-- 261
E LP +W + + P L + LV LS T VL + +EE E
Sbjct: 461 NFSELISSPLPPNPDNVWTIKL--PSELGHRLVFLSLPKATMVLKIEDGSLEELENASES 518
Query: 262 -FTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSS----WEPPNGKSISVVSCNK 316
T + +T + G + +++QV ++ I+ K V + W PP G I +C+
Sbjct: 519 FKTENDRTIFVGLMGESSIIQVCENSLSQIALAKKPPVLNSKLEWLPPAGIKIVEATCSS 578
Query: 317 NQV-LCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVG 375
Q+ L + ++ + E+ S ++ + + I+ LS +T K+ AVG
Sbjct: 579 TQLALGLSNNEIVWFELDTSNGGEVLNEYQDRVEMPDKITALSLPQT----FKSDFLAVG 634
Query: 376 LWTDISARLLSLPSL-EEVCKEPLGGEII---PRSILMTCFEGHCYLLVALGDGSMFYFS 431
D S +++ L S + E L +++ P + + +G +L + L G +
Sbjct: 635 C-QDSSVKIIGLKSTSRDSFLEVLSMQVVLSPPSDLKLVYSKGLLFLHLGLDAGVYIRSN 693
Query: 432 LDPASGRLTDKKKVTLGTQP 451
+D G+L D + LG++P
Sbjct: 694 IDKTDGQLFDIRTKYLGSKP 713
>gi|402591342|gb|EJW85272.1| hypothetical protein WUBG_03818, partial [Wuchereria bancrofti]
Length = 1025
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/131 (19%), Positives = 66/131 (50%), Gaps = 15/131 (11%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELE-----IQDVQFLHGCQNPTI 838
+DP R + ++ ++P + +L + ++++ +++ + D+ FL G PT+
Sbjct: 140 VDPGQRCASMLVFGRYLAVLPFNDSSAQLHSYTVQLSQIDSRLVNVVDMVFLDGYYEPTL 199
Query: 839 ICIHQDVN---GRHVKTHE------ISLKEKE-FTKTPWKQDNIEMEASLVIPVPEPLGG 888
+ +++ V GR ++ +SL KE + W+ N+ M+ + ++ +P P+GG
Sbjct: 200 LFLYEPVQTTCGRACVRYDTMCVLGVSLNVKEQVLASVWQLTNLPMDCNQILAIPRPVGG 259
Query: 889 AIIIGQESILY 899
+++ ++Y
Sbjct: 260 ILLVATNELIY 270
>gi|393907593|gb|EJD74705.1| CPSF A subunit region family protein [Loa loa]
Length = 990
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/131 (19%), Positives = 65/131 (49%), Gaps = 15/131 (11%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELE-----IQDVQFLHGCQNPTI 838
+DP R + ++ ++P +L + ++++ +++ + D+ FL G PT+
Sbjct: 140 VDPGQRCAAMLVFGRYLAVLPFNDSGAQLHSYTVQLSQIDSRLVNVVDMVFLDGYYEPTL 199
Query: 839 ICIHQDVN---GRHVKTHE------ISLKEKE-FTKTPWKQDNIEMEASLVIPVPEPLGG 888
+ +++ V GR ++ +SL KE + W+ N+ M+ + ++ +P P+GG
Sbjct: 200 LFLYEPVQTTCGRACVRYDTMCVLGVSLNVKEQVLASVWQLTNLPMDCNQILAIPRPVGG 259
Query: 889 AIIIGQESILY 899
+++ ++Y
Sbjct: 260 ILLVATNELIY 270
>gi|260835073|ref|XP_002612534.1| hypothetical protein BRAFLDRAFT_58262 [Branchiostoma floridae]
gi|229297911|gb|EEN68543.1| hypothetical protein BRAFLDRAFT_58262 [Branchiostoma floridae]
Length = 318
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 28/144 (19%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEK----DNFELKASS---------IRMEELE-----IQ 825
+DPE R + +Y ++P K D E+ A S I++++L+ +
Sbjct: 132 VDPEGRCAVMLIYGKRLVVLPFRKEGAVDEAEMSAGSKSSILPTYMIKLQDLDERLINVV 191
Query: 826 DVQFLHGCQNPTIICIHQDVN---GRHVKTHE------ISLK-EKEFTKTPWKQDNIEME 875
D+QFLHG +PT++ +++ + GR + +SL + W N+ +
Sbjct: 192 DLQFLHGYFDPTLLILYEPLQTWPGRVAVRQDTCCIVAVSLNIAQRVHPIIWSVGNLPFD 251
Query: 876 ASLVIPVPEPLGGAIIIGQESILY 899
+ VP+P+GG ++ S+LY
Sbjct: 252 CKQAVAVPKPIGGVLVFAVNSLLY 275
>gi|170576536|ref|XP_001893668.1| CPSF A subunit region family protein [Brugia malayi]
gi|158600196|gb|EDP37499.1| CPSF A subunit region family protein [Brugia malayi]
Length = 1323
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/131 (19%), Positives = 66/131 (50%), Gaps = 15/131 (11%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELE-----IQDVQFLHGCQNPTI 838
+DP R + ++ ++P + +L + ++++ +++ + D+ FL G PT+
Sbjct: 140 VDPGQRCASMLVFGRYLAVLPFNDSSTQLHSYTVQLSQIDSRLVNVVDMVFLDGYYEPTL 199
Query: 839 ICIHQDVN---GRHVKTHE------ISLKEKE-FTKTPWKQDNIEMEASLVIPVPEPLGG 888
+ +++ V GR ++ +SL KE + W+ N+ M+ + ++ +P P+GG
Sbjct: 200 LFLYEPVQTTCGRACVRYDTMCVLGVSLNVKEQVLASVWQLTNLPMDCNQILAIPRPVGG 259
Query: 889 AIIIGQESILY 899
+++ ++Y
Sbjct: 260 ILLVATNELIY 270
>gi|340371789|ref|XP_003384427.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Amphimedon queenslandica]
Length = 1408
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 23/191 (12%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y V+GT EE K G+++IF + +L+ + ++E K +
Sbjct: 1081 YIVVGTMATFGEELSAK-GKVLIFDVSVVIPEPGKPFSQYRLKNLYDQEQKWPVTGLECV 1139
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFN--NIIALFLKVKGDFILVGDLMRSLTLLQ 1150
NG +L ++ + ++++ + K+L L + + I +KG FIL GD+ RS+ LL
Sbjct: 1140 NGLILTAMGQKIFMWQFKDNKDL-LAVAFIDAETYIHTAQSIKG-FILTGDVTRSIQLLH 1197
Query: 1151 YKTMEGSFEEISRDYNPNWMTSIEILDDELFLG-----AENSYNLFICQKDSAATSDEDR 1205
Y S IS+D NP + S + D LG ++ + LF Q ++ A+S
Sbjct: 1198 YNEDRRSLSLISQDPNPMEVFSTTFMIDGKALGFLVSDSDRNITLFQYQPENPASS--GG 1255
Query: 1206 THLQEVGTVHL 1216
+L G +H+
Sbjct: 1256 ANLVRCGDIHV 1266
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 30/149 (20%)
Query: 781 IAIIDPEARVIGLRLYNGLFKIIPLEKD---------------NFELKASSIRMEELE-- 823
+ +DPE R + L+ + P ++D + L +I + +L
Sbjct: 129 VVKVDPEGRCAVMLLFGSHLAVCPFQQDLSIDTPLSPSPSLDTHDILPTYTISLRDLPEP 188
Query: 824 ---IQDVQFLHGCQNPTIICIHQ---DVNGRHVKTHE------ISLKEKEFTKTP-WKQD 870
I+D+ F+ G +PT++ + + GR + +SL + + T W
Sbjct: 189 LPVIKDMTFIEGYTSPTLLFLSEVSPTWAGRISLRQDSMMLLGLSLNTSDKSHTVIWTLK 248
Query: 871 NIEMEASLVIPVPEPLGGAIIIGQESILY 899
N+ ++S + PVP+PLGG ++ G +++Y
Sbjct: 249 NLPFDSSYLHPVPKPLGGVLVFGANTLIY 277
>gi|297792471|ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
lyrata]
gi|297309955|gb|EFH40379.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
lyrata]
Length = 1444
Score = 50.1 bits (118), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 109/291 (37%), Gaps = 84/291 (28%)
Query: 79 SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSR 138
S+ LL +G L +L L + + + + K +L +T + N + F+GSR
Sbjct: 377 SDVALLSTKSGELLLLTLIYDGRAVQRLDLSKSKASVLASD-----ITSVGNSLFFLGSR 431
Query: 139 LGDSQLVKLN------------RSPDEN---------------GTY-------------- 157
LGDS LV+ + R DE+ T+
Sbjct: 432 LGDSLLVQFSCRSGPAASLPGLRDEDEDIEGEGHQAKRLRISSDTFQDTIGNEELSLFGS 491
Query: 158 -------------VSVMESFTNLAPIIDMV----------VVDLERQGQGQLVTCSGGFK 194
+V +S N+ P+ D + +Q +LV CSG K
Sbjct: 492 TPNNSDSAQKSFSFAVRDSLVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGK 551
Query: 195 EGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPK--NLDNT------------LVLSF 240
G+L ++R + E ++LPG KGIW + S + N D++ L++S
Sbjct: 552 NGALCVLRQSVRPEMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISV 611
Query: 241 VGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
T VL + E TE + +T GN+ R V+QV A ++
Sbjct: 612 EARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFEHGARIL 662
Score = 48.1 bits (113), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 26/151 (17%)
Query: 1030 LSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY----DDGK--LQQIAEKEIK 1083
++L+++ GE+ T +GTA V E+ + GR+++F + D+ + + ++ +E+K
Sbjct: 1119 VTLLNASTGEN-ETLLAVGTAYVQGEDVAAR-GRVLLFSFGKNGDNSQNVVTEVYSRELK 1176
Query: 1084 GACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALF---------LKVKG 1134
GA ++ G LL S + L +W N EL N +A F + V
Sbjct: 1177 GAISAVASIQGHLLISSGPKIILHKW-NGTEL--------NGVAFFDAPPLYVVSMNVVK 1227
Query: 1135 DFILVGDLMRSLTLLQYKTMEGSFEEISRDY 1165
FIL+GD+ +S+ L +K +++D+
Sbjct: 1228 TFILLGDVHKSIYFLSWKEQGSQLSLLAKDF 1258
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 817 IRMEELE---IQDVQFLHGCQNPTIICIHQDVN---GR-HVKTHEISLKEKEFTKT---- 865
I + +LE ++D FLHG P I+ + ++ + GR K H L T
Sbjct: 239 INLRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCVLSALSINTTLKQH 298
Query: 866 --PWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVA 909
W N+ +A ++ VP P+GG +++ +I YHS + A+A
Sbjct: 299 PVIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALA 344
>gi|67473926|ref|XP_652712.1| splicing factor 3b subunit 3 [Entamoeba histolytica HM-1:IMSS]
gi|56469590|gb|EAL47325.1| splicing factor 3b subunit 3, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 1108
Score = 50.1 bits (118), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 165/404 (40%), Gaps = 41/404 (10%)
Query: 157 YVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP 216
Y ++ S ++ P+ + VVD Q + G SL+I+ +G+ +E + L
Sbjct: 338 YFNISTSISSHHPLTSIDVVDSHEVLQIRAFVGKGS--RSSLKILTHGLNPDECMSLSLQ 395
Query: 217 GIKGIWALSIGSPKN--LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV 274
+ IW L P N +V+ T VL +++ G + QT + G
Sbjct: 396 HPRNIWTLK---PYNEQTHQYVVIGLENQTYVLKTLPDALKQCPECGIRPNVQTLHAGMF 452
Query: 275 DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-----TGCDVYY 329
T++Q+ I I E ++S +P ++I V + + QV+ A + C++ Y
Sbjct: 453 IDGTLVQIHAHGIITILNE---KLSEQDPGAQRTILVGTSSSCQVVIALKNAQSKCEIVY 509
Query: 330 LEVHGSEIKQLA---HRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLS 386
E + +E K+LA R + + + + N KA+ A + + A +L+
Sbjct: 510 FE-YNTETKKLAEVERRIIRSNIIAMALGDFEN-------GKAKKVAY-ICDNGMANILT 560
Query: 387 L---PSLEEVCKEPLGGEIIPRSILMTCF----EGHCYLLVALGDGSMFYFSLDPASGRL 439
L ++ + + E SI++T F E +L + + DG + + + + L
Sbjct: 561 LEKESKFLQILEINITVEGEAESIILTQFNEISEPFLFLGIGMKDGCCYGYKVIGKNSEL 620
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN 499
K +GT P V + V S +YS ++ F+ ++ + + +
Sbjct: 621 MWCK--LIGTDPVVFGQYEFGGNIGVIMSSSTMIFMYSYFSRIEFTPISYQPLKALAPFI 678
Query: 500 AESYPDSLALATDSTFT---FGTIDEIQKLHIRTVPLGEAPRRI 540
+ +S+A T+ T G++D+ + PL PR++
Sbjct: 679 TDFSGESIAGITNDELTVIAIGSLDD--RFTYDEQPLLYTPRKV 720
>gi|449706784|gb|EMD46555.1| splicing factor 3b subunit 3, putative [Entamoeba histolytica KU27]
Length = 1079
Score = 50.1 bits (118), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 165/404 (40%), Gaps = 41/404 (10%)
Query: 157 YVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP 216
Y ++ S ++ P+ + VVD Q + G SL+I+ +G+ +E + L
Sbjct: 309 YFNISTSISSHHPLTSIDVVDSHEVLQIRAFVGKGS--RSSLKILTHGLNPDECMSLSLQ 366
Query: 217 GIKGIWALSIGSPKN--LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV 274
+ IW L P N +V+ T VL +++ G + QT + G
Sbjct: 367 HPRNIWTLK---PYNEQTHQYVVIGLENQTYVLKTLPDALKQCPECGIRPNVQTLHAGMF 423
Query: 275 DPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-----TGCDVYY 329
T++Q+ I I E ++S +P ++I V + + QV+ A + C++ Y
Sbjct: 424 IDGTLVQIHAHGIITILNE---KLSEQDPGAQRTILVGTSSSCQVVIALKNAQSKCEIVY 480
Query: 330 LEVHGSEIKQLA---HRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLS 386
E + +E K+LA R + + + + N KA+ A + + A +L+
Sbjct: 481 FE-YNTETKKLAEVERRIIRSNIIAMALGDFEN-------GKAKKVAY-ICDNGMANILT 531
Query: 387 L---PSLEEVCKEPLGGEIIPRSILMTCF----EGHCYLLVALGDGSMFYFSLDPASGRL 439
L ++ + + E SI++T F E +L + + DG + + + + L
Sbjct: 532 LEKESKFLQILEINITVEGEAESIILTQFNEISEPFLFLGIGMKDGCCYGYKVIGKNSEL 591
Query: 440 TDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLN 499
K +GT P V + V S +YS ++ F+ ++ + + +
Sbjct: 592 MWCK--LIGTDPVVFGQYEFGGNIGVIMSSSTMIFMYSYFSRIEFTPISYQPLKALAPFI 649
Query: 500 AESYPDSLALATDSTFT---FGTIDEIQKLHIRTVPLGEAPRRI 540
+ +S+A T+ T G++D+ + PL PR++
Sbjct: 650 TDFSGESIAGITNDELTVIAIGSLDD--RFTYDEQPLLYTPRKV 691
>gi|10257491|dbj|BAB11613.1| cleavage and polyadenylation specificity factor subunit
[Arabidopsis thaliana]
Length = 1448
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 159 SVMESFTNLAPIIDMV----------VVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIE 208
+V +S N+ P+ D + +Q +LV CSG K G+L ++R I E
Sbjct: 512 AVRDSLVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPE 571
Query: 209 EHACIDLPGIKGIWALSIGSPK--NLDNT------------LVLSFVGHTRVLTLSGAEV 254
++LPG KGIW + S + N D++ L++S T VL +
Sbjct: 572 MITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLETADLLT 631
Query: 255 EETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
E TE + +T GN+ R V+QV A ++
Sbjct: 632 EVTESVDYYVQGRTIAAGNLFGRRRVIQVFEHGARIL 668
Score = 48.5 bits (114), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 26/151 (17%)
Query: 1030 LSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY----DDGK--LQQIAEKEIK 1083
++L+++ GE+ T +GTA V E+ + GR+++F + D+ + + ++ +E+K
Sbjct: 1123 VTLLNASTGEN-ETLLAVGTAYVQGEDVAAR-GRVLLFSFGKNGDNSQNVVTEVYSRELK 1180
Query: 1084 GACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALF---------LKVKG 1134
GA ++ G LL S + L +W N EL N +A F + V
Sbjct: 1181 GAISAVASIQGHLLISSGPKIILHKW-NGTEL--------NGVAFFDAPPLYVVSMNVVK 1231
Query: 1135 DFILVGDLMRSLTLLQYKTMEGSFEEISRDY 1165
FIL+GD+ +S+ L +K +++D+
Sbjct: 1232 SFILLGDVHKSIYFLSWKEQGSQLSLLAKDF 1262
Score = 43.1 bits (100), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 817 IRMEELE---IQDVQFLHGCQNPTIICIHQDVN---GR-HVKTHEISLKEKEFTKT---- 865
I + +LE ++D FLHG P I+ + ++ + GR K H L T
Sbjct: 239 INLRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCVLSALSINSTLKQH 298
Query: 866 --PWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVA 909
W N+ +A ++ VP P+GG +++ +I YHS + A+A
Sbjct: 299 PVIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALA 344
>gi|53136520|emb|CAG32589.1| hypothetical protein RCJMB04_30d19 [Gallus gallus]
Length = 503
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVL-GTA---VVHPEENEPKQGRII 1065
I NT +++ QL E A S+ +F ++VL G A +++P G +
Sbjct: 158 IQGNTLDLV---QLEQNEAAFSVAVCRFSNTGEEWYVLVGVAKDLILNPRS--VAGGFVY 212
Query: 1066 IFHYDDG--KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHF 1122
+ +G KL+ + + ++ ++ F G++L + +R+++ +K LR E H
Sbjct: 213 TYKLVNGGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHI 272
Query: 1123 NNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFL 1182
N I ++ G ++V D+ S ++YK E + D P W+T+ +LD +
Sbjct: 273 ANYIC-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVA 331
Query: 1183 GAENSYNLFICQ--KDSAATSDEDRT 1206
GA+ N+ + + ++ DED T
Sbjct: 332 GADKFGNICVVRLPPNTNDEVDEDPT 357
>gi|449470342|ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cucumis sativus]
Length = 1504
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHY----DDGK--LQQIAEKEIKGACYSMCEFNGKL 1096
T +GTA V E+ + GR+++F D+ + + ++ KE+KGA ++ G L
Sbjct: 1183 TLLAVGTAYVQGEDVAAR-GRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHL 1241
Query: 1097 LASINSTVRLFEWTNEKELRLECSHFNNIIALF---LKVKGDFILVGDLMRSLTLLQYKT 1153
L + + L +WT + L F ++ L+ L + +FIL+GD+ +S+ L +K
Sbjct: 1242 LIASGPKIILHKWTGAE---LNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKE 1298
Query: 1154 MEGSFEEISRDY 1165
+++D+
Sbjct: 1299 QGAQLSLLAKDF 1310
Score = 47.4 bits (111), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 25/157 (15%)
Query: 159 SVMESFTNLAPIIDMV----------VVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIE 208
+V +S N+ P+ D + +Q +LV CSG K G+L I+R I E
Sbjct: 555 AVRDSLINIGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGKNGALCILRQSIRPE 614
Query: 209 EHACIDLPGIKGIWAL-------SIGSPKNL-------DNTLVLSFVGHTRVLTLSGAEV 254
++LPG KGIW + SI + L++S T VL
Sbjct: 615 MITEVELPGCKGIWTVYHKNTRGSIADSSRMVPDDDEYHAYLIISLEARTMVLVTGELLT 674
Query: 255 EETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
E TE + +T GN+ R V+QV S A ++
Sbjct: 675 EVTESVDYFVHGRTIAAGNLFGRRRVIQVYESGARIL 711
Score = 42.0 bits (97), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 53/236 (22%)
Query: 779 GIIAIIDPEARVIGLRLYNGLFKII----------PLEKDNF-ELKASSIRME------- 820
G + +DP+ R G+ +Y GL II ++ + F A S R+E
Sbjct: 179 GPVVKVDPQGRCGGVLVY-GLQMIILKASQAGSGLVVDDEAFGNTGAISARVESSYLINL 237
Query: 821 -ELEIQDVQ---FLHGCQNPTIICIHQD-------VNGRH----VKTHEISLKEKEFTKT 865
+L+++ V+ F+HG P ++ +H+ V+ +H V IS K+
Sbjct: 238 RDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMVSALSISTTLKQHPLI 297
Query: 866 PWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVA----------PQIIKS 915
W N+ +A ++ VP P+GG ++I SI Y+S + +A Q +
Sbjct: 298 -WSASNLPHDAYKLLAVPSPIGGVLVISANSIHYNSQSASCMLALNNYAVSADSSQDMPR 356
Query: 916 STIVCYAKVDANGERYLLGDLA------GRLFMLLLEKEEKMDGTFSVKEPKVELL 965
S ++DA +L+ D+A G L +L L + ++ + + K +L
Sbjct: 357 SNF--NVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVL 410
>gi|50302849|ref|XP_451361.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74607703|sp|Q6CXH8.1|RSE1_KLULA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|49640492|emb|CAH02949.1| KLLA0A08129p [Kluyveromyces lactis]
Length = 1269
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 129/309 (41%), Gaps = 35/309 (11%)
Query: 158 VSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG 217
+S+++S T+L P+ L + + +L + + + EE LP
Sbjct: 421 LSILDSLTSLNPL-----TSFHASNSTPLTILAAANQTENLVKLTSAVDFEELISTTLPR 475
Query: 218 IKG-IWALSIGSPKNLDNTLV-LSFVGHTRVLTLSGAEVEETEMGG----FTSDQQTFYC 271
I +W + I PKN ++L+ LS T +L + VE+ GG F ++ + +
Sbjct: 476 IPSKLWTVRI--PKNETHSLIFLSMETSTTILKIHEGTVED--FGGDSNPFILNKPSLFV 531
Query: 272 GNVDPRTVLQVTPSAAILISTESKARVSS---WEPPNGKSISVVSCNKNQVLCA-TGCDV 327
G + R+++QVT + I + W PP G I CN+ Q++ A T ++
Sbjct: 532 GAMVQRSIIQVTRDCLLQIIEMHDGPYTKKLEWYPPAGVGIVTAFCNETQLVVALTNHEI 591
Query: 328 YYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL 387
Y E+ + +L R +E + I+ L+ + K+ +G D S ++L+L
Sbjct: 592 CYFEIIEDSLNELQDR-VEMDSTVNSIALLAGQ-------KSGYCVLGC-EDSSLQILNL 642
Query: 388 ----PSLEEVCK-EPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDK 442
P +C + L + P S+L + V + G L+ G + D
Sbjct: 643 QSKHPDFFTICAIQSLISK--PHSLLFMRDTSDLKIHVGMKSGVYLSSKLNINDGTVFDV 700
Query: 443 KKVTLGTQP 451
+ +GT+P
Sbjct: 701 RTRFVGTKP 709
>gi|367015172|ref|XP_003682085.1| hypothetical protein TDEL_0F00630 [Torulaspora delbrueckii]
gi|359749747|emb|CCE92874.1| hypothetical protein TDEL_0F00630 [Torulaspora delbrueckii]
Length = 1254
Score = 49.7 bits (117), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 149/370 (40%), Gaps = 53/370 (14%)
Query: 123 ECLTYLDNGVVFVGSRLGDSQLVKLNR-------------------SPDENGTYVSVMES 163
E L NG +F S LGDS L + + P E +S++ +
Sbjct: 345 EKLHIFKNGYLFANSELGDSYLFQFDSLGDDSEKITSADPGKQLRFEPTETLNNLSIVST 404
Query: 164 FTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDL-PGIKGIW 222
NL P++ V + +T + S RI+ NG+ E+ L PG + IW
Sbjct: 405 KKNLNPLLSTQVTN------SNPLTIAA----NSTRILTNGVRFEDDISSPLPPGAENIW 454
Query: 223 ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTS-----DQQTFYCGNVDPR 277
+ + +++ L L F T +L + +E EM + ++ Y + +
Sbjct: 455 TIKVPG-ESIHKLLFLGFPKSTMILEIESGTLE--EMNSLKNPFKVKGDKSLYVAAMTDQ 511
Query: 278 TVLQVTPSAAILISTESKARVSS--WEPPNGKSISVVSCNKNQV-LCATGCDVYYLEVHG 334
++QV + + ++ + W PP G I + ++ Q+ + + C++ Y E+
Sbjct: 512 YIIQVCENELRQVVSDKDGFTCNLKWFPPAGIRIVCATSSETQLSIGLSNCEIVYFEITS 571
Query: 335 SEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL--PSLEE 392
+ + + +E + IS + ++ ++ AVG D + +L+SL ++E
Sbjct: 572 GSLHE-SQNKIELDEPITSISMVRSK-------RSDYLAVG-SNDSTVKLISLKRSDMDE 622
Query: 393 VCK-EPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQP 451
+ + + P + L + + L + L +G ++ G+L D + LG +P
Sbjct: 623 FMEIVSIQTVLAPVTDLKLIQDSNLELHIGLENGVYCRSMVNNNDGQLYDVRTKFLGPRP 682
Query: 452 TVLKTFRSLS 461
L S+S
Sbjct: 683 VTLSCLGSIS 692
>gi|71032257|ref|XP_765770.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352727|gb|EAN33487.1| hypothetical protein TP01_0243 [Theileria parva]
Length = 1504
Score = 49.7 bits (117), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
N + L K D I VGDLM S+ +L+++ + E RD+N W TS+ +D+ L
Sbjct: 1236 NTFVVSLDTKDDVIFVGDLMTSVKMLKFR--DNRLLETCRDFNTLWTTSLAAVDNSSCLV 1293
Query: 1184 AENSYNLFICQKDSAATSDEDRTHLQEVGTVH 1215
+++ N + +K T+D+ + G H
Sbjct: 1294 SDDLGNFLLFKKVQHPTTDQQSIRFDKQGLFH 1325
Score = 45.8 bits (107), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 13/214 (6%)
Query: 103 DGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVK----LNRSPDE----- 153
DG F + E LG +P L L + +F S++G+S ++ LN +E
Sbjct: 420 DGDFMINEVMAIRLGSFPVPSSLIKLGDHHIFYTSKMGNSSIISIYSILNSRNNEEQTLE 479
Query: 154 NGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI 213
G + S + TNL PI D + G+ ++ C G S I G+ E
Sbjct: 480 QGDFKSSEWAQTNLGPITDFAYREEASSGENTILACCGMGNSASFCEIYFGLSSEVIHTS 539
Query: 214 DLPGIKGIWALSIG-SPKNLDNTLVLSFVGHTRVLTLSGAEVEET---EMGGFTSDQQTF 269
D+PG+ +++ + + + L +SF TR T+S ++ + + E+ S Q
Sbjct: 540 DVPGVHDLFSFPMKSPDDSSSSLLCISFFRFTRFYTVSFSKPDVSDPPELISIESTPQPA 599
Query: 270 YCGNVDPRTVLQVTPSAAILISTESKARVSSWEP 303
V+ R V + + LI+ R S P
Sbjct: 600 QNRRVNARRVNKRQKARTALINALENNRRPSENP 633
Score = 43.9 bits (102), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 133/308 (43%), Gaps = 37/308 (12%)
Query: 279 VLQVTPSAAILISTESK----ARVSSWE--PPNGKSISVVSCNKN-QVLCATGCDVYYLE 331
+LQVTP IL++ K A++S P + ++S + C+ +L +T C V
Sbjct: 680 ILQVTPKNIILVNDSFKSVRRAKISQIVTLPGDKYALSSLVCSPYILLLMSTNCIV---- 735
Query: 332 VHGSEIKQLAHRALEYEVA---CLDISPLSNEETSSEPAKAQLAAVGLWTDISARL-LSL 387
V + K R L++ V+ C+ + L N + + L V W + + L L++
Sbjct: 736 VLEYDFKNFNSRCLDFTVSAMGCISKNDLLNSDLGIFASGGGLVGVSSWANNNMILFLTV 795
Query: 388 PSLEEVC--KEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGR----LTD 441
L+ V K L ++ SI + YLL++L +G ++ + L A R L++
Sbjct: 796 KDLKVVYSHKVNLDYDVYVVSIKFAKINSNVYLLLSLSNGFLYIYQLTRADRRIKMTLSN 855
Query: 442 KKKVTLGTQPTVLKTFRS--------LSTTNVFACSDRPTVIYSSNHKLVFSNV---NLR 490
K K++ + + S LS N+ + VI+ N K+ ++ + NL
Sbjct: 856 KSKLSFWSFKLLELKVGSGEGEDTCDLSKVNLITTGPKSYVIHPKNEKITYTKINIDNLH 915
Query: 491 QVNHMCSLN--AESYPDSLAL--ATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESS 546
V ++ +L AE + L + + G ++ + +++ + G ++ Y +S
Sbjct: 916 TVTNIVNLGTVAEKEKEELLVIYGNHKSVVVGRLNLLNNFNVQKILKGSNFNKVIY-DSR 974
Query: 547 QTFGVITT 554
VI+T
Sbjct: 975 TKLAVIST 982
>gi|363750540|ref|XP_003645487.1| hypothetical protein Ecym_3168 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889121|gb|AET38670.1| Hypothetical protein Ecym_3168 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1295
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 115/271 (42%), Gaps = 27/271 (9%)
Query: 196 GSLRIIRNGIGIEEHACIDLPGIK-GIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEV 254
G+ + ++ GI +EE LP IW ++ + K L L+ T +L ++ V
Sbjct: 451 GATKTLKAGIELEEIISSRLPSTPLDIWTTALNNSK-FHRLLFLALPKSTMILKIADGTV 509
Query: 255 EETE--MGGFT-SDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSS---WEPPNGKS 308
EE E M F+ S+ +T G++ ++++QV + I ++ S + S W PP G
Sbjct: 510 EELELEMNPFSLSEDRTLLIGSMGAQSIIQVCENKLIQVAALSGDKYISKLEWFPPAGIR 569
Query: 309 ISVVSCNKNQ-VLCATGCDVYYLEVHGSE-IKQLAHRALEYEVACLDISPLSNEETSSEP 366
I +C+ Q VL + ++ Y E+ ++ + +L R +++ N + +
Sbjct: 570 ILDATCSNTQLVLALSNNEIVYFEIGTNDSLNELQDR--------IELEDTINGLSVANG 621
Query: 367 AKAQLAAVGLWTDISARLLSLPS------LEEVCKEPLGGEIIPRSILMTCFEGHCYLLV 420
++ V + D S ++ SL E V + L SI + L +
Sbjct: 622 MRSNYLVV-VCGDTSVKVYSLKMDDQNNFFEVVSMQALTSS--ANSIKLVSSNDSLCLHI 678
Query: 421 ALGDGSMFYFSLDPASGRLTDKKKVTLGTQP 451
L G LD G+L D + LG++P
Sbjct: 679 GLASGVYVRSRLDKHDGQLFDVRTKYLGSKP 709
>gi|260941105|ref|XP_002614719.1| hypothetical protein CLUG_05497 [Clavispora lusitaniae ATCC 42720]
gi|238851905|gb|EEQ41369.1| hypothetical protein CLUG_05497 [Clavispora lusitaniae ATCC 42720]
Length = 1108
Score = 49.3 bits (116), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 79 SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSR 138
S+R+LL G +L L + T V KVE +G ++ L YL VVF SR
Sbjct: 324 SDRHLLVSDMGHTLLLTLSGSVRASTT-RVTWFKVEDVGLSTVASSLAYLGPNVVFAASR 382
Query: 139 LGDSQLVKLNRSPDENG-TYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGS 197
L S L +L + G T V V+ + P++DM + +GQ LV GG G
Sbjct: 383 LSRSLLFQLRKGKGNLGTTTVRVLAFLPSSPPVLDMHAI----KGQDGLVVAQGGLHSGE 438
Query: 198 LRI 200
L +
Sbjct: 439 LVV 441
>gi|285999|dbj|BAA02805.1| KIAA0017 [Homo sapiens]
Length = 399
Score = 49.3 bits (116), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ QL E A S+ +F ++VL N ++ Y
Sbjct: 54 IQGNTLDLV---QLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 110
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 111 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 170
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 171 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 229
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 230 DKFGNICVVRLPPNTNDEVDEDPT 253
>gi|449524573|ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like, partial [Cucumis sativus]
Length = 741
Score = 49.3 bits (116), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHY----DDGK--LQQIAEKEIKGACYSMCEFNGKL 1096
T +GTA V E+ + GR+++F D+ + + ++ KE+KGA ++ G L
Sbjct: 420 TLLAVGTAYVQGEDVAAR-GRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHL 478
Query: 1097 LASINSTVRLFEWTNEKELRLECSHFNNIIALF---LKVKGDFILVGDLMRSLTLLQYKT 1153
L + + L +WT + L F ++ L+ L + +FIL+GD+ +S+ L +K
Sbjct: 479 LIASGPKIILHKWTGAE---LNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKE 535
Query: 1154 MEGSFEEISRDY 1165
+++D+
Sbjct: 536 QGAQLSLLAKDF 547
>gi|366995619|ref|XP_003677573.1| hypothetical protein NCAS_0G03340 [Naumovozyma castellii CBS 4309]
gi|342303442|emb|CCC71221.1| hypothetical protein NCAS_0G03340 [Naumovozyma castellii CBS 4309]
Length = 1280
Score = 49.3 bits (116), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 75/172 (43%), Gaps = 16/172 (9%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP-GIKGIWALSIGSPKNLDNTLVLSFVGH 243
QL+T + KE ++ ++ N +LP ++ IW + K + + LSF+
Sbjct: 415 QLITSNS--KENTITVLSNATRFNNLISTNLPPNVRNIWTI-----KAKHSLMFLSFINS 467
Query: 244 TRVLTLSGAEVEETEMGG----FTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVS 299
T +L ++ +E+ + D+ T Y + +++Q+ + I ++ +
Sbjct: 468 TMILQITNDSMEQLTLPYKSPFIEKDEMTIYVNKMGSNSIVQICTNTLRQIHIDTNQTFT 527
Query: 300 ---SWEPPNGKSISVVSCNKNQ-VLCATGCDVYYLEVHGSEIKQLAHRALEY 347
+W PP G I+ CN Q +L + ++ Y ++ S+ R LE+
Sbjct: 528 EKLNWFPPAGIHITNAQCNDTQLILSLSNNEIVYFQMDQSDSLMEYQRRLEF 579
>gi|405977622|gb|EKC42064.1| Cleavage and polyadenylation specificity factor subunit 1
[Crassostrea gigas]
Length = 1369
Score = 48.9 bits (115), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 33/215 (15%)
Query: 717 LYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPS 776
L+G I MK+ + P +D L + ++E +L+ + G
Sbjct: 13 LFGNIMSMKYVKLPGALRDSLLLSFSEAKLSVVEYDPGTHDLQTTSLHFFEEPSMKGGFF 72
Query: 777 ENGII--AIIDPEARVIGLRLYNGLFKIIPLEKD-------------------NFELKAS 815
N I +DP+ R + +Y I+P +D ++ +
Sbjct: 73 TNYCIPEVRVDPDGRCAAMLVYGTHMVILPFRRDVMVEEGDNLAGTSKSPILSSYIIDLR 132
Query: 816 SIRMEELEIQDVQFLHGCQNPTIICIHQDVN---GR--------HVKTHEISLKEKEFTK 864
+ + + ++D QFLHG PT+ + + + GR + ++L+EK
Sbjct: 133 NFDEKIINVKDFQFLHGYYEPTVFILFEPLQTWAGRTAVRADTCSIVAISLNLQEK-VHP 191
Query: 865 TPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
W ++ + V+ VP P+GG III S+LY
Sbjct: 192 VIWSLGSLPFDCCQVLAVPRPIGGVIIIAVNSLLY 226
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 1042 NTYFVLGTAVVHPEENEPKQGRIII-----------FHYDDGKLQQIAEKEIKGACYSMC 1090
+Y V+GT + EE + GR+II K++ + EKE KG ++
Sbjct: 1043 KSYIVMGTNLSLGEEVTSR-GRVIIADIIEVVPEPGMPLTKHKIKTLYEKEQKGPVTALA 1101
Query: 1091 EFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQ 1150
+ NG L+ +I + +++ + + + + I + +K IL GD+++S+++ Q
Sbjct: 1102 DINGLLITAIGQKLYIWQLKDNDLMGVAFIDTHIYIHTLVTIK-HIILAGDILKSVSVYQ 1160
Query: 1151 YKTMEGSFEEISRDYNPNWMTSIEILDD 1178
Y+ +SRD P + + + L D
Sbjct: 1161 YQEEHKVLSIVSRDPRPLEVYTADFLID 1188
>gi|380488197|emb|CCF37544.1| hypothetical protein CH063_08850 [Colletotrichum higginsianum]
Length = 271
Score = 48.9 bits (115), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 1095 KLLASINSTVRLFEWTNEKE----LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQ 1150
KL+A ++ TV ++E+ E LR + + + + V G+ I + DLM+S+TL++
Sbjct: 7 KLVAGLSKTVVVYEYAEESSTSGALRKLATFRPSTFPVDIDVNGNMIGIADLMQSMTLVE 66
Query: 1151 YKTME----GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRT 1206
+ + E +R + W TS+ L+ +L A+ NL + +++ A ++ D+
Sbjct: 67 FIPAQDGNKAKLVERARHFQYIWATSVCHLEGHSWLEADAQGNLMVLRRNPDAPTEHDQK 126
Query: 1207 HLQEVGTVHL 1216
++ HL
Sbjct: 127 QMEVTSEFHL 136
>gi|391328522|ref|XP_003738737.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Metaseiulus occidentalis]
Length = 1500
Score = 48.9 bits (115), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 1072 GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLK 1131
K++ I K ++C G L+A++ + LF+ + + + I +
Sbjct: 1213 SKVKTILSKPQNAPVTALCSVKGHLMAAVGQKLFLFQLKDNDLVGMAFLDTQIYILSAIS 1272
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE---LFLGAENSY 1188
+K FIL+GD+ +S+TLL+Y+ + +S+D P + SIE L D FL +
Sbjct: 1273 IKS-FILIGDVHKSITLLRYQEESKTLAVVSKDTKPVQIYSIEYLVDNSQMAFLATDAQC 1331
Query: 1189 NLFI 1192
N+ +
Sbjct: 1332 NILV 1335
Score = 45.4 bits (106), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 109/257 (42%), Gaps = 48/257 (18%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPV--------KEIF-LYGKIAVMKFFRGPTDKKDLLFII 740
NLVVA I+++ + +GL ++ F +G I+ M+ R + LLF+
Sbjct: 29 NLVVAGGTVIKVYRLVCDGLNETDDKAKLEHQQTFNCFGNISGMEKIRLNASRDSLLFVF 88
Query: 741 TQRYNAMIL--ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNG 798
+ +++ ++ L I + + N +I + DP R + +Y
Sbjct: 89 KETKISLVEYDPATHELQTLAIRSLEKEEYKEGFYNFVGNTLIKV-DPLNRCAAVLIYGK 147
Query: 799 LFKIIP-LEKDNFELK---ASS---------------IRMEELE-------IQDVQFLHG 832
IIP ++KD +L ASS IR+ +L+ I D+ FL+G
Sbjct: 148 HLAIIPFVKKDATDLSDPIASSKSTQTNTSGFLEYYTIRLIDLDEEKGVNNIHDMTFLNG 207
Query: 833 CQNPTIICIHQDV---NGRHVKTHE------ISLKEKEFTKTP-WKQDNIEMEASLVIPV 882
PT++ +++ + GR + +SL + P W + + V+PV
Sbjct: 208 YYEPTLLLLYEPIRTWTGRVAIRQDTCSIMALSLNVYQRVHPPVWSFSGLPFNSFKVLPV 267
Query: 883 PEPLGGAIIIGQESILY 899
P+P+GG +I+ ++LY
Sbjct: 268 PKPIGGVLILSVNALLY 284
Score = 43.9 bits (102), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLD------NTLVL 238
++ G + G+L +++ + + +LPG +W + S ++ D L+L
Sbjct: 574 EIFAACGHERSGALCVLQRTVRPQVITTFELPGCTDLWTVRSSSTRSPDVDEDSHQFLIL 633
Query: 239 SFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
S T +L +G E+ E + GF + T + GN+ D R ++QV P++ L+
Sbjct: 634 SRPDSTMILQ-TGQEINELDHSGFCTQSPTIFAGNLADGRYIIQVCPNSVRLL 685
>gi|12653387|gb|AAH00463.1| SF3B3 protein [Homo sapiens]
gi|13111947|gb|AAH03146.1| SF3B3 protein [Homo sapiens]
Length = 399
Score = 48.9 bits (115), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKF---GEDPNTYFVLGTA---VVHPEENEPKQGR 1063
I NT +++ QL E A S+ +F GED Y ++G A +++P G
Sbjct: 54 IQGNTLDLV---QLEQNEAAFSVAVCRFSNIGED--WYVLVGVAKDLILNPRS--VAGGF 106
Query: 1064 IIIFHY-DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECS 1120
+ + ++G KL+ + + ++ ++ F G++L + +R+++ +K LR E
Sbjct: 107 VYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK 166
Query: 1121 HFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDEL 1180
H N I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD +
Sbjct: 167 HIANYIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDT 225
Query: 1181 FLGAENSYNLFICQ--KDSAATSDEDRT 1206
GA+ N+ + + ++ DED T
Sbjct: 226 VAGADKFGNICVVRLPPNTNDEVDEDPT 253
>gi|428170663|gb|EKX39586.1| hypothetical protein GUITHDRAFT_143370 [Guillardia theta CCMP2712]
Length = 1162
Score = 48.9 bits (115), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 133/339 (39%), Gaps = 55/339 (16%)
Query: 11 IGIEEHACIDLPGIKGIWALSIGSP-----KNLDNTLVLSFVGHTRVLTLSGAEWGFHLL 65
I EE ++ ++G W+ S P +NL+ VG L ++W +
Sbjct: 236 IKYEESNKLNFNLLQGPWSFSTLHPETSLGRNLE-------VGAFLYPHLPSSQWAIRIT 288
Query: 66 RGF---SSL------GSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELL 116
F SSL GS S ++LG G++ +L + E K ++ +++
Sbjct: 289 SRFAVASSLAVPAGPGSNRKKRSMHWILGSNDGQMHILSVSGESK-SANVTINVKRIDTN 347
Query: 117 GEISIPECLTYL---DNGVVFVGSRLGDSQLVKL---------NRSPDENGTYVSVMES- 163
+S P T L + + ++ G + ++ + N D+ V VM S
Sbjct: 348 IPLSNPRVATILRSQERTLQLWCTKTGYTSILDITKLSHHIENNSQTDQEIPGVEVMCSP 407
Query: 164 -FTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGI--------GIEEHACID 214
+L I D + VD G+ QL+ G + LR+ R+G+ G E C D
Sbjct: 408 FEESLGSIKDAIAVDFLGDGEMQLLLACGEGSDSCLRLCRSGLEVSKIIEEGPEMPECSD 467
Query: 215 LPGIKGIWALSIGSPKN---------LDNTLVLSF--VGHTRVLTLSGAEVEETEMGGFT 263
+ ++G+ L + N D+ LV SF + T+VL L G E + G
Sbjct: 468 IFALRGLHILHVQPHDNGSNIQRLRAFDSHLVFSFASINQTKVLELDGHEFVPVTLPGLC 527
Query: 264 SDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWE 302
D T + ++ ++QVT LI+ SS E
Sbjct: 528 EDANTVFITSLPHGHLVQVTEMEIRLINMRKSVMNSSQE 566
>gi|344300987|gb|EGW31299.1| hypothetical protein SPAPADRAFT_140061 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1107
Score = 48.9 bits (115), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 184/453 (40%), Gaps = 59/453 (13%)
Query: 120 SIPEC--LTYLDNGVVFVG-----------SRLGD--SQLVKLNRSPDENGTYVSVMESF 164
+IP C L +G +F +LGD + ++K ++ PD +++
Sbjct: 304 TIPPCISLNIFKSGFLFANVLNNDKLLYQFEKLGDESTTVIKSSQYPDHTEEVNITLKAL 363
Query: 165 TNLAPIIDM-----VVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI- 218
NLA +ID+ ++D ++ LV S K+ + GI E LP
Sbjct: 364 DNLA-LIDIHESLSPILDAKQTPSNMLVLSSHYLKQ-----VTRGIPTTEIVSTPLPFTP 417
Query: 219 KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLS-GAEVEETEMGGFTSDQQTFYCGNVDPR 277
++ + D+ LV++ ++ L LS G VEE +DQ T +
Sbjct: 418 TSVYTTKLTQASVHDSYLVVTSSLASQTLVLSIGEVVEEVPDSKLVTDQHTLSIQQMGKS 477
Query: 278 TVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSE 336
+++QV + I +V+ W P G +++ S N NQV+ A + C+V Y E+ +
Sbjct: 478 SLVQVYTNGIRQIG----HKVTDWFSPAGITVTHASTNANQVIIAMSNCEVVYFEIDVDD 533
Query: 337 IKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKE 396
QL E+ I+ L+ +T S+ +A +G D + +++SL E C +
Sbjct: 534 --QLIEYQQRLELTS-SITSLAISDTRSD-----VAVIGC-ADETIQVVSLA--ESDCLD 582
Query: 397 PLGGEII---PRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTV 453
+ + S++M H + + +G LD +L D + LG++P
Sbjct: 583 VKSLQALSANASSLVMIENTVH----IGMENGVYARTKLDIK--QLKDTRVQYLGSRPVS 636
Query: 454 LKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDS 513
+ T V A S + Y+ + + +++ ++ S N+E + + +
Sbjct: 637 MSRISVGDTAGVLAISSSAWIGYTHDTWRIMPLLDI-DISSAASFNSEDIEGIVGIHGNE 695
Query: 514 --TFTFGTIDEIQKLH---IRTVPLGEAPRRIA 541
F+ GT D H I+ L PRR+
Sbjct: 696 LVIFSLGTEDGFDPSHEWTIKKSRLRYTPRRMV 728
>gi|193785523|dbj|BAG50889.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 48.9 bits (115), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 1010 IDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHY 1069
I NT +++ QL E A S+ +F ++VL N ++ Y
Sbjct: 158 IQGNTLDLV---QLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTY 214
Query: 1070 ---DDG-KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNN 1124
++G KL+ + + ++ ++ F G++L + +R+++ +K LR E H N
Sbjct: 215 KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 274
Query: 1125 IIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGA 1184
I+ ++ G ++V D+ S ++YK E + D P W+T+ +LD + GA
Sbjct: 275 YIS-GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGA 333
Query: 1185 ENSYNLFICQ--KDSAATSDEDRT 1206
+ N+ + + ++ DED T
Sbjct: 334 DKFGNICVVRLPPNTNDEVDEDPT 357
>gi|294873066|ref|XP_002766507.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
gi|239867408|gb|EEQ99224.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
Length = 276
Score = 48.5 bits (114), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 103/276 (37%), Gaps = 71/276 (25%)
Query: 60 WGFHLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEI 119
W H L+ F +L+ G L+ + L +E + V E + I
Sbjct: 18 WSRHKLKNFF-----------FFLIQSEYGDLYKVTLSHKEGV-----VSEIQCSYFDSI 61
Query: 120 SIPECLTYLDNGVVFVGSRLGDSQLVKL------------NRSPDENGTYVSV------- 160
+ + L G +F S G+ L + + P+ V+
Sbjct: 62 PVAISICVLKTGFLFAASEFGNHALYQFASLGDVTPALVTSSHPNRENAVVAFKPRTLKN 121
Query: 161 ---MESFTNLAPIIDMVVVD--------LERQGQG-------------QLVTCSGGFKEG 196
+ ++LAPI DM V+D L+ G G Q+ SG
Sbjct: 122 LTPFDELSSLAPITDMKVMDCFSTQTQVLQADGSGMQQTVTTGMSVGCQIYALSGRGPRS 181
Query: 197 SLRIIRNGIGIEEHACIDLPG-------IKGIWA----LSIGSPKNLDNTLVLSFVGHTR 245
+LRI+R+G+ + E +LPG IK A ++ G ++ D +V+SFV T
Sbjct: 182 ALRILRHGLTLGEAGASELPGQPNALFTIKPFGASYAPVAEGEVES-DRYIVVSFVDQTL 240
Query: 246 VLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQ 281
L ++ + E GF +Q T + + ++ +Q
Sbjct: 241 TLLVTSDNIHEVTDSGFAKEQPTLFAMRMQDKSAIQ 276
>gi|301632350|ref|XP_002945249.1| PREDICTED: splicing factor 3B subunit 3-like [Xenopus (Silurana)
tropicalis]
Length = 196
Score = 48.5 bits (114), Expect = 0.022, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 25/190 (13%)
Query: 343 RALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEI 402
+ + +V C+ ++ + E +++ AVGL D + R++SL + C +PL +
Sbjct: 14 KEMSADVVCMSLANVPPGEQ-----RSRFLAVGL-VDNTVRIISLDPSD--CLQPLSMQA 65
Query: 403 IPRSILMTCFE-----------------GHCYLLVALGDGSMFYFSLDPASGRLTDKKKV 445
+P C G YL + L +G + LDP +G L+D +
Sbjct: 66 LPAQPEALCIVEMGGAERQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTR 125
Query: 446 TLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPD 505
LG++P L R V A S R + YS + + ++ + + +E P+
Sbjct: 126 YLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPE 185
Query: 506 SLALATDSTF 515
+ + +T
Sbjct: 186 GIVAISTNTL 195
>gi|26351753|dbj|BAC39513.1| unnamed protein product [Mus musculus]
Length = 463
Score = 48.5 bits (114), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLK 1131
KL+ + + ++ ++ F G++L + +R+++ +K LR E H N I+ ++
Sbjct: 182 KLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYIS-GIQ 240
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
G ++V D+ S ++YK E + D P W+T+ +LD + GA+ N+
Sbjct: 241 TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 300
Query: 1192 ICQ--KDSAATSDEDRT 1206
+ + ++ DED T
Sbjct: 301 VVRLPPNTNDEVDEDPT 317
>gi|291232724|ref|XP_002736306.1| PREDICTED: cleavage and polyadenylation specific factor 1-like
[Saccoglossus kowalevskii]
Length = 304
Score = 48.5 bits (114), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 63/148 (42%), Gaps = 30/148 (20%)
Query: 782 AIIDPEARVIGLRLYNGLFKIIPLEKD--------------------NFELKASSIRMEE 821
++DP+ R + +Y ++P ++ ++ + I +
Sbjct: 131 VVVDPDNRCAVMLMYGSKLVVLPFRREGAAEDQDGVLPGSSKSSFLPSYIINLQDIDQKL 190
Query: 822 LEIQDVQFLHGCQNPTIICIHQDVN---GRHVKTHE------ISLK-EKEFTKTPWKQDN 871
+ I D++FLHG PT+ + + + GR + ISL E+ W +N
Sbjct: 191 INIIDIKFLHGYYEPTLFILFEPLRTWPGRVAVRKDTCCIVAISLNIEQRVHPVIWSLNN 250
Query: 872 IEMEASLVIPVPEPLGGAIIIGQESILY 899
+ + IPVP+P+GG ++ +S+LY
Sbjct: 251 LPFDCIKAIPVPKPIGGVLVFAVDSLLY 278
>gi|440301552|gb|ELP93938.1| CPSF A subunit region protein, putative, partial [Entamoeba invadens
IP1]
Length = 538
Score = 48.5 bits (114), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 1050 AVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEW 1109
++VH + + I++ Y+ QI + ++ C ++C F GKLLA I +T+R+++
Sbjct: 236 SLVHDYKENTGECWIVV--YNAINFNQIHKTPVESVCRALCAFEGKLLAGIGTTLRMYDL 293
Query: 1110 TNEKELRLEC------SHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISR 1163
+ +R C S N I V + I++ + + Y + + +
Sbjct: 294 GKQILIR-RCEVGGIPSDINGI-----NVSNNKIVLSTVASGFVYVDYDVEANILKVVDQ 347
Query: 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDE 1203
D + +TS ILD++ +G + +LFI + D +DE
Sbjct: 348 DKVWHSLTSSTILDEQTTIGFDKYGSLFITEIDWELGNDE 387
>gi|399216612|emb|CCF73299.1| unnamed protein product [Babesia microti strain RI]
Length = 1195
Score = 48.5 bits (114), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 110/512 (21%), Positives = 201/512 (39%), Gaps = 59/512 (11%)
Query: 58 AEWGFHLLRGFS-SLGSLWNGWSERYLLGDLAGRLFMLLLE-KEEKMDGTFSVKEPKVEL 115
AE F +G SL + + + Y D+ G+L+M + K EK + K ++
Sbjct: 340 AEIDFICYKGLQRSLSRIGDDETHLYYACDVTGQLYMFKITIKHEKDKYLINDKMRNLDT 399
Query: 116 ---LGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIID 172
L IS L L + +FV +R+GDS++++L+ NG VS + S +L+PIID
Sbjct: 400 IIPLYTISPFSLLLALSDDCIFVATRVGDSKILQLS-----NGK-VSEIWSKPSLSPIID 453
Query: 173 MVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNL 232
V+ QL+ SG K ++ I+ G+ I L + ++ +S P+ +
Sbjct: 454 ATVIG--GNCTDQLIAVSGIGKSANISILTIGLFFHNICNISLAKVSKLFIIS-SQPEMI 510
Query: 233 DNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILIST 292
LV + + +E G C + Q+TP+ +I IST
Sbjct: 511 --FLVAITSTQSYYFKMVDQSIELISRG------DKIICAFQYNNQLYQLTPN-SIRIST 561
Query: 293 ESKARVSS--WEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVA 350
R++ W + + + C +N ++ + G ++ L + S+ ++ + ++ +
Sbjct: 562 IDNPRITKVLWT-SDEPIVHYLKC-ENMLIISGGYNLSALVIDKSDPIKITYNHIQSFTS 619
Query: 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMT 410
+ L A V L D + S+ +C+ P + S L+
Sbjct: 620 PISAIALVENMNKLHILVATFTNVLLIVDCETK-----SIGTICEIPTRTSCVGVSDLVY 674
Query: 411 CFEGHC-YLLVALGDGSMFYFSLDPASGRLTDKKK-------VTLGTQPTVLKTFRSLST 462
+ Y+ + L DG++ ++ + R + K G P K
Sbjct: 675 VVKNSIYYIFIGLTDGNLLVYTNEREDVRHFLECKGWEFFMSKNFGVYPLYFK------- 727
Query: 463 TNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSL------NAESYPDSLALAT-DSTF 515
S R T+I H + FS + R V+ + SL + E D L +A+
Sbjct: 728 ----HNSQRLTLIGQHVHFVTFSPITGRIVDFL-SLEVPPVRDLEFISDDLLIASLTDHL 782
Query: 516 TFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQ 547
G + + L +R +P+ A I Y + S
Sbjct: 783 ELGKLSDCNSLDVRRIPVSGALDLIEYHQPSN 814
>gi|242021233|ref|XP_002431050.1| Cleavage and polyadenylation specificity factor 160 kDa subunit,
putative [Pediculus humanus corporis]
gi|212516279|gb|EEB18312.1| Cleavage and polyadenylation specificity factor 160 kDa subunit,
putative [Pediculus humanus corporis]
Length = 1409
Score = 48.1 bits (113), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 106/270 (39%), Gaps = 56/270 (20%)
Query: 686 RTDLNLVVAKNNRIEIHTVTPE----------GLRPVK-------EIFLYGKIAVMKFFR 728
R++ +LVVA N + + + P+ RP K L+ + M+
Sbjct: 25 RSETSLVVAGKNILRVFQLIPDIDPTKRDAYTERRPPKMKLECLSSFSLFANVMSMQAVS 84
Query: 729 GPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAII--DP 786
+D L + + ++E D +L L+ + D G + + I + DP
Sbjct: 85 LAGSSRDALLLSFREAKLCVVEYDPDSHDLRTLSLHYFEEEDMKGGWTNHYDIPYVRVDP 144
Query: 787 EARVIGLRLYNGLFKIIPLEKDNF----------------------ELKASSIRMEELE- 823
E R + +Y I+P +++ L + +I + E++
Sbjct: 145 EGRCAAMLVYGRKLVILPFRRESKLDDPDIALLDPHSSSVATAKAPVLSSYTITLREIDE 204
Query: 824 ----IQDVQFLHGCQNPTIICIHQDVN---GRHVKTHE------ISLK-EKEFTKTPWKQ 869
+ D+QFL+G PT++ +++ + GR + +SL ++ W
Sbjct: 205 KLENVIDIQFLYGYYEPTLLILYEPLKTFAGRIAVRSDTCAMIAVSLNIQQRVHPAIWSV 264
Query: 870 DNIEMEASLVIPVPEPLGGAIIIGQESILY 899
N+ + IPVP+PLGG +I +++Y
Sbjct: 265 GNLPFNCTQAIPVPKPLGGTLIFSVNALIY 294
Score = 45.4 bits (106), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y +GT + E+ K GRI+I+ + + + KE KG ++C
Sbjct: 1085 YVAVGTNYNYSEDITSK-GRILIYDIIEVVPEPGQPLTKNRFKTVYAKEQKGPVTALCHV 1143
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
G L+ ++ + +++ + + + I + VK ILV D+ +S++LL+++
Sbjct: 1144 LGFLVTAMGQKIYIWQLKDNDLVGIAFIDTQIYIHQMISVKS-LILVADVYKSISLLRFQ 1202
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
+ +SRD+ P + +IE+L D +G
Sbjct: 1203 EEYRTLSLVSRDFRPCEVYAIELLLDNTQMG 1233
>gi|28175094|gb|AAH31197.2| Sf3b3 protein, partial [Mus musculus]
Length = 494
Score = 48.1 bits (113), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLK 1131
KL+ + + ++ ++ F G++L + +R+++ +K LR E H N I+ ++
Sbjct: 213 KLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYIS-GIQ 271
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
G ++V D+ S ++YK E + D P W+T+ +LD + GA+ N+
Sbjct: 272 TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 331
Query: 1192 ICQ--KDSAATSDEDRT 1206
+ + ++ DED T
Sbjct: 332 VVRLPPNTNDEVDEDPT 348
>gi|58702050|gb|AAH90169.1| LOC564406 protein, partial [Danio rerio]
Length = 416
Score = 48.1 bits (113), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDNFE---------------LKASSIRMEELE----- 823
+DPE R + +Y ++P KD L + I + EL+
Sbjct: 143 VDPENRCAVMLVYGTCLVVLPFRKDTLADEQEGIVGEGQKSSFLPSYIIDVRELDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D++FLHG PT++ + +Q GR + ISL ++ W N+
Sbjct: 203 IIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHPVIWSLSNLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + V+ VP+P+GG ++ S+LY
Sbjct: 263 FDCNQVMAVPKPIGGVVVFAVNSLLY 288
>gi|397627714|gb|EJK68584.1| hypothetical protein THAOC_10223, partial [Thalassiosira oceanica]
Length = 456
Score = 48.1 bits (113), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 1060 KQGRIIIFHYDDG-KLQQIAEKEIK------GACYSMCEFNGKLLASINSTVRLFEWTNE 1112
K+ ++++ G +LQ + ++ G ++ F G+LL I ++RL+E
Sbjct: 158 KESHVVLYRVVSGERLQLLHRTKVDDGSSGGGPVLALVHFQGRLLVGIGKSLRLYEMGKR 217
Query: 1113 KELR-LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMT 1171
+ L+ E ++ L+ GD VGD+M+S+ ++Y ++RD + +T
Sbjct: 218 QLLKKCELRGLPTMVKT-LQAAGDRAFVGDMMQSMQFVRYDATANRLVLVARDRSARPIT 276
Query: 1172 SIEILD 1177
E+LD
Sbjct: 277 CQELLD 282
>gi|326501484|dbj|BAK02531.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 101
Score = 47.8 bits (112), Expect = 0.036, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 506 SLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQT 548
SLA+A + + G+ID++QKLHIRT+ L E R I +QE S T
Sbjct: 4 SLAIAEEGELSIGSIDDVQKLHIRTILLIEQARSIFHQEQSMT 46
>gi|50292811|ref|XP_448838.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608786|sp|Q6FLQ6.1|RSE1_CANGA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|49528151|emb|CAG61808.1| unnamed protein product [Candida glabrata]
Length = 1296
Score = 47.8 bits (112), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 172/419 (41%), Gaps = 55/419 (13%)
Query: 69 SSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYL 128
S L L N LL G LF +++ E+ K + + IS L
Sbjct: 289 SDLQILKNNVGFLLLLQTNTGHLFKVIIFPNEEDRNRPIAKLGYFDKVKHISNSSKLHIF 348
Query: 129 DNGVVFVGSRLG-DSQLVKLNRSPDENGTY---------VSVMESFTNLAPII------- 171
+NG +++ S+ D + D + Y +SV+ TN+ PI
Sbjct: 349 NNGSMYINSQFNYDHVYLNFESIGDNDENYDKIDNENENISVISKHTNINPIALNLCLME 408
Query: 172 DMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLP-GIKGIWALSIGSPK 230
+M + + QG G T S + IIRN I ++E+ LP G+ I+ + +
Sbjct: 409 NMPLTFMHFQG-GNRTTDSE-----KVNIIRNAIPLKEYVSSPLPQGVSNIFTIKT-QYQ 461
Query: 231 NLDNTLVLSFVGHTRV-LTLSGAEVEETEMGGFT---SDQQTFYCGNVDPRTVLQVTPSA 286
+ + + L+ + T V L ++ +E+ T D T + + +++QV
Sbjct: 462 SYHSFIFLTMINFTTVILKIADDSIEQYIPASDTFKLKDDMTIHVATMGDNSIIQVCKDE 521
Query: 287 AILISTESKARVS-----SWEPPNGKSI-SVVSCNKNQVLCATGCDVYYLEVHGSEIKQL 340
I +SK + W PP G SI S VS +L + ++ YL++ + + +
Sbjct: 522 FRQILLDSKDEENFKMNLKWYPPAGVSILSAVSNFSQLILALSNNEIVYLQLENNTLIEY 581
Query: 341 AHR-ALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP------SLEEV 393
+R L + L L N+ T K+++ AVG +D +LSL S E V
Sbjct: 582 KNRPELPDVITSL---ALLNDNTK----KSEILAVGT-SDNMVNVLSLEIVDEAISFETV 633
Query: 394 CKEPLGGEIIPRSILMTCFEGHCYLLVALG--DGSMFYFSLDPASGRLTDKKKVTLGTQ 450
+ L IP S+L+ +GH + + +G DGS LD + + + + LGT+
Sbjct: 634 VFQALDA--IPSSLLILN-QGHKLVNLHIGVEDGSYLVNRLDLRNMSINNILRKQLGTR 689
>gi|134025022|gb|AAI35011.1| LOC564406 protein [Danio rerio]
Length = 348
Score = 47.8 bits (112), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDNFE---------------LKASSIRMEELE----- 823
+DPE R + +Y ++P KD L + I + EL+
Sbjct: 143 VDPENRCAVMLVYGTCLVVLPFRKDTLADEQEGIVGEGQKSSFLPSYIIDVRELDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D++FLHG PT++ + +Q GR + ISL ++ W N+
Sbjct: 203 IIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHPVIWSLSNLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + V+ VP+P+GG ++ S+LY
Sbjct: 263 FDCNQVMAVPKPIGGVVVFAVNSLLY 288
>gi|290988576|ref|XP_002676977.1| predicted protein [Naegleria gruberi]
gi|284090582|gb|EFC44233.1| predicted protein [Naegleria gruberi]
Length = 744
Score = 47.8 bits (112), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 167/419 (39%), Gaps = 67/419 (15%)
Query: 157 YVSVMESFTNLAPIIDM----VVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212
Y+ + ES T+L P + V+D +++G ++ L ++ G+ +
Sbjct: 117 YIPLEESMTDLQPRSLLPNISYVIDFDKKGDDFIIA-----TPKRLCSVKKGMSCRVTSL 171
Query: 213 ID--LPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFY 270
D GI ++ +P + ++LSFV ++VL +S ++E F S Q TFY
Sbjct: 172 TDESYDGIDNVF-----TPTT--DFIILSFVNQSKVLRISEDSIDECNNNVFESSQATFY 224
Query: 271 CGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYL 330
C + +LQVT + L+ + +SS + + +V++ N + + Y
Sbjct: 225 CNQILNSFILQVTATEMRLMDLQLSTLLSSIKINS----TVITSKANNIYVS-----YEN 275
Query: 331 EVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSL 390
++ E+ Q + + LD S T A + G+ IS +S
Sbjct: 276 KITKFEVSQEGQITESFSIT-LDRDISSMRATDGNHLIASTYS-GIIYFISGNTISKTI- 332
Query: 391 EEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQ 450
+ + I +I+ + F LL+ L DG + + +D KK LG
Sbjct: 333 ------DINSQQIETNIVESIFYTGSLLLLGLRDGHLLVYDIDQL------IKKFKLGDV 380
Query: 451 PTVLK-TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSL---NAESYPDS 506
P L+ TF + + A S+ I S + + + NL +H+ S+ N Y +S
Sbjct: 381 PVQLRETFDDI----IIAVSNNCYYI-SVDSSMNLNISNLLVNDHILSVQNFNVTGYENS 435
Query: 507 -LALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGS 564
L L++DS +I+ + I T + I E Q R+ + E D S
Sbjct: 436 LLCLSSDS--------KIKVISIETTNFQPMIKEIYSNEDCQ-------RVHVNEEDNS 479
>gi|449477808|ref|XP_004155129.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cucumis sativus]
Length = 643
Score = 47.8 bits (112), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 25/157 (15%)
Query: 159 SVMESFTNLAPIIDMV----------VVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIE 208
+V +S N+ P+ D + +Q +LV CSG K G+L I+R I E
Sbjct: 391 AVRDSLINIGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGKNGALCILRQSIRPE 450
Query: 209 EHACIDLPGIKGIWAL-------SIGSPKNL-------DNTLVLSFVGHTRVLTLSGAEV 254
++LPG KGIW + SI + L++S T VL
Sbjct: 451 MITEVELPGCKGIWTVYHKNTRGSIADSSRMVPDDDEYHAYLIISLEARTMVLVTGELLT 510
Query: 255 EETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
E TE + +T GN+ R V+QV S A ++
Sbjct: 511 EVTESVDYFVHGRTIAAGNLFGRRRVIQVYESGARIL 547
>gi|193702313|ref|XP_001945086.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Acyrthosiphon pisum]
Length = 1335
Score = 47.4 bits (111), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 43/252 (17%)
Query: 686 RTDLNLVVAKNNRIEIHTVTPEG--LRPVKEIF-------LYGKIAVMKFFRGPTDKKDL 736
R + LVVA N + ++ + P +P K F L+G I ++ D
Sbjct: 25 RVEKCLVVAGVNILRVYRLVPTDTTCQPPKTKFECLAQYTLFGNIMCLQSVTLCPSSPDA 84
Query: 737 LFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENG-------IIAIIDPEAR 789
L + ++E D+ +L L+ H D+ +NG + +DP+ R
Sbjct: 85 LLLSFSEAKFSLVEYDRDMHSLRTLS-LHYFEDDKF----KNGHTQHWSPPLIRVDPDGR 139
Query: 790 VIGLRLYNGLFKIIPLEK---DN---------FELKASSIRMEELEIQDVQFLHGCQNPT 837
+ +Y F ++P + DN + + S I + I D FLHG PT
Sbjct: 140 CVVGLVYGSYFVVLPFGRTIDDNAKSAQVMPSYTIPISKIDPKMNNIMDFDFLHGYYEPT 199
Query: 838 IICIHQDVN---GRHVKTHE------ISLK-EKEFTKTPWKQDNIEMEASLVIPVPEPLG 887
++ +++ V GR + ISL ++ W D++ + VI V P+G
Sbjct: 200 LLILYEPVKTFAGRIAVRKDTCAMVAISLNIQQHVHPVIWSLDSLPYDCQKVIAVSRPIG 259
Query: 888 GAIIIGQESILY 899
G +I+ S++Y
Sbjct: 260 GVLIMAVNSLIY 271
Score = 43.5 bits (101), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 16/183 (8%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFHYDD-----------GKLQQIAEKEIKGACYSMCEF 1092
Y +GT + E+ +GRI +F D K++ I KE KG ++
Sbjct: 1010 YIAMGTNYSY-SEDITSRGRIFLFDIIDVVPEPGKPLTKNKIKMIYAKEQKGPVTAITHV 1068
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
G L+ ++ + +++ + + + + L +K ILV DL +S+TLL+++
Sbjct: 1069 VGFLVTAVGQKIYIWQLKDNDLIGIAFIDTEVYVHQMLSIKS-LILVADLFKSITLLRFQ 1127
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDEL---FLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
+ + RD P + I L D FL ++ NL + A HL
Sbjct: 1128 EEYRTLSLVCRDSKPLEVFDINFLIDNTELGFLASDRDQNLLLYLYQPMARESYGGQHLV 1187
Query: 1210 EVG 1212
G
Sbjct: 1188 RRG 1190
>gi|331247468|ref|XP_003336362.1| hypothetical protein PGTG_18394 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 346
Score = 47.4 bits (111), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMIL 749
+L++ K + IE++ + EGL+ + + ++ + + ++ TD L ++T N L
Sbjct: 28 SLILGKQSTIEVYGIESEGLKLLHQAKVFDVVEHINSYKKLTDSTSTLLVLTADLNLFTL 87
Query: 750 ECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPL 805
R + I+T A ++ +P++ +I+DP R + L NG+ +IPL
Sbjct: 88 --RFCPKSATIITTASISLHQIGARPADYVQTSIVDPHGRCVVLHALNGILHVIPL 141
>gi|91078626|ref|XP_968117.1| PREDICTED: similar to cleavage and polyadenylation specificity
factor cpsf [Tribolium castaneum]
Length = 1413
Score = 47.4 bits (111), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHT 244
+LVT +G K G+L +++ + + LPG +W + G K+ L+LS T
Sbjct: 512 ELVTTAGYGKNGALCVLQKSVRPQIVTTFTLPGCSNMWTVHAGEDKHA--FLILSQEDGT 569
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
+L +G E+ E + GF + T Y GN+ + + ++QVT SA L+
Sbjct: 570 MILQ-TGDEINEIDNTGFATHIPTVYAGNLGNLKYIVQVTSSAVRLL 615
Score = 41.6 bits (96), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 79/170 (46%), Gaps = 18/170 (10%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y +GT + E+ + GRI+IF + ++I K+ KG ++ +
Sbjct: 1089 YIAVGTNYNYGEDVTSR-GRILIFDIIEVVPEPGQPLTKNRFKEIYAKDQKGPVTALSQV 1147
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
G L++++ + +++ + + + L +K +LV D+ +S++LL+++
Sbjct: 1148 KGFLVSAVGQKIYIWQLKDNDLVGVAFIDTQIYTHQILTIKS-LLLVADVYKSISLLRFQ 1206
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLG-----AENSYNLFICQKDS 1197
+ +SRD+ P + S+E + D +G +E + L++ Q +S
Sbjct: 1207 EEYRTLSLVSRDFRPCEVFSVEYMIDNTTMGFLVSDSEKNLVLYMYQPES 1256
>gi|358255664|dbj|GAA57348.1| splicing factor 3B subunit 3, partial [Clonorchis sinensis]
Length = 1055
Score = 47.4 bits (111), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 3/131 (2%)
Query: 1074 LQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKEL-RLECSHFNNIIALFLKV 1132
L+ I E + ++C F G+LL + +R+++ +K L + E H N+I +
Sbjct: 754 LEFIHETLVDDFPAAVCAFQGRLLVGVGKRLRIYDMGRKKLLKKCENKHIPNLITGIYAI 813
Query: 1133 KGDFILVGDLMRSLTLLQYKTM-EGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLF 1191
G I+V D+ S L+Y+ E + D NP W+T + +LD ++ N+
Sbjct: 814 -GSRIIVTDVQESAFWLRYRPRSENQLVIFADDANPRWITHLAVLDPSTVAISDKFGNVI 872
Query: 1192 ICQKDSAATSD 1202
I + + D
Sbjct: 873 ILRLPNGVIDD 883
Score = 47.0 bits (110), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 414 GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPT 473
G YL + L +G + LDP +G L+D + LGT+P L V + S R
Sbjct: 475 GILYLNIGLINGVLLRVILDPVTGELSDTRTRYLGTRPVKLFRIMMQGGEAVLSVSSRSW 534
Query: 474 VIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRT-VP 532
+ Y+ ++ ++ + + ++E P+ + +++ ++++ + +T P
Sbjct: 535 LSYAYQNRFHLIPLSYEALEYASGFSSEQCPEGIVAICNNSLRIMALEKLGAVFNQTSYP 594
Query: 533 LGEAPRRIAYQESSQTFGVITT 554
L PR++ + S +I T
Sbjct: 595 LQYTPRKMVFHPDSNIAYIIET 616
>gi|442629265|ref|NP_001261223.1| CG13900, isoform C [Drosophila melanogaster]
gi|440215087|gb|AGB93918.1| CG13900, isoform C [Drosophila melanogaster]
Length = 469
Score = 47.0 bits (110), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 29/167 (17%)
Query: 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGD 141
+LL G +F + LE ++ + V E K++ + + L G +FV S G+
Sbjct: 301 FLLQTEQGDIFKITLETDDDV-----VSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355
Query: 142 SQLVKLNRSPD--------------ENGTYVSVMESFTNL---------APIIDMVVVDL 178
L ++ D E T+ + NL APII V DL
Sbjct: 356 HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADL 415
Query: 179 ERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWAL 224
+ QL G +LR++R+G+ + E A +LPG +W +
Sbjct: 416 ANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTV 462
>gi|453087531|gb|EMF15572.1| splicing factor 3B subunit 3 [Mycosphaerella populorum SO2202]
Length = 1223
Score = 47.0 bits (110), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 133/330 (40%), Gaps = 29/330 (8%)
Query: 167 LAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIE---EHACIDLPGIKGIWA 223
L P++ V +L + Q+ G + IR+G+ +E ++ ++P IW
Sbjct: 433 LHPLMKTRVDNLTGEDAPQIYGIQGKGNRSQFKTIRHGLDVEVLINNSMGNVP-YDNIWT 491
Query: 224 LSIGSPKNLDNTLVLSF-VGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQV 282
+ L+LS G + G VE+ E F ++ T + + ++QV
Sbjct: 492 FKHRTTDEHHRYLLLSSNYGDLTIACSIGDSVEQIENSNFLENRATVHAEQMGDAVLVQV 551
Query: 283 TPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEI-KQL 340
A + S +++ W P ++ V S N+ Q+L + ++ + + EI QL
Sbjct: 552 --HARGIRSIYQDGKLNEWNTPAHRTCVVASANQRQLLLGLSSAELCFFWMGEDEILVQL 609
Query: 341 AHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP--------SLEE 392
E I+ +S T +A+ A VG D + R+LS+ S++
Sbjct: 610 E----EMPEMSGKITAISVGSTPKGRQQAKYAVVGC-DDCTIRVLSIELDSPLEARSVQA 664
Query: 393 VCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFS--LDPASGRLTDKKKVTLGTQ 450
+ P E++ ++ G +V +G S Y +D +G L D + LGT+
Sbjct: 665 LSAVPTSLEVVE---MLDPASGTTVNVVHIGLQSGLYLRAIIDETTGELGDVRTKFLGTK 721
Query: 451 PTVLKTFRSLSTTNVFACSDRPTVIYSSNH 480
L + V ACS RP V Y NH
Sbjct: 722 APRLCPVQVEDEECVLACSTRPWVGY--NH 749
>gi|255539681|ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
[Ricinus communis]
gi|223550020|gb|EEF51507.1| cleavage and polyadenylation specificity factor cpsf, putative
[Ricinus communis]
Length = 1461
Score = 47.0 bits (110), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYDDGK------LQQIAEKEIKGACYSMCEFNGKL 1096
T +GTA V E+ + GR+++F + ++ KE+KGA ++ G L
Sbjct: 1139 TLLAIGTAYVQGEDVAAR-GRVLLFSVVKSTENSQVLVSEVYSKELKGAISALASLQGHL 1197
Query: 1097 LASINSTVRLFEWTNEKELRLECSHFNNIIALF---LKVKGDFILVGDLMRSLTLLQYKT 1153
L + + L +WT + L F + L+ + + +FIL+GD+ +S+ L +K
Sbjct: 1198 LIASGPKIILHKWTGTE---LNGVAFYDAPPLYVASMNIVKNFILLGDIHKSIYFLSWKE 1254
Query: 1154 MEGSFEEISRDY 1165
+++D+
Sbjct: 1255 QGAQLSLLAKDF 1266
Score = 46.6 bits (109), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 109/295 (36%), Gaps = 91/295 (30%)
Query: 82 YLLGDLA------GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFV 135
+LL D+A G L +L L + ++ + + K +L +T + N + F+
Sbjct: 372 WLLNDVALLSAKNGELLLLSLVYDGRVVQRLDLSKSKASVL-----TSDITTIGNSLFFL 426
Query: 136 GSRLGDSQLV------------------------------KLNRSPDE------------ 153
GSRLGDS LV +L RS +
Sbjct: 427 GSRLGDSLLVQFTNGLGPSVVSSGLKEEVGEIEGDVPSAKRLKRSASDGLQDMVSGEELS 486
Query: 154 ------NGT-------YVSVMESFTNLAPI----------IDMVVVDLERQGQGQLVTCS 190
N T +V +S N+ P+ D + +Q LV CS
Sbjct: 487 LYGSTANNTESAQKSFSFAVRDSLINVGPLKDFSYGLRSNYDASATGIAKQSNYDLVCCS 546
Query: 191 GGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPK--NLDNT------------L 236
G K G+L I+R I E +DLPG +GIW + + + N+D + L
Sbjct: 547 GHGKNGTLCILRQSIRPEMITEVDLPGCRGIWTVYHKNARGHNVDLSKMAAAADEYHAYL 606
Query: 237 VLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
++S T VL + E TE + +T GN+ R V+QV A ++
Sbjct: 607 IISMEARTMVLETADLLSEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARIL 661
Score = 44.3 bits (103), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 24/171 (14%)
Query: 819 MEELEIQDVQFLHGCQNPTIICIHQD-------VNGRHVKTHEISLKEKEFTKTP---WK 868
M+ ++D FLH P ++ +H+ V+ +H +L K P W
Sbjct: 242 MDMKHVKDFIFLHDYIEPVVVILHERELTWAGRVSWKHHTCMISALSISTTLKQPTLIWS 301
Query: 869 QDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVA----PQIIKSSTIVCYA-- 922
N+ +A ++ VP P+GG ++I +I YHS + A+A I SS + A
Sbjct: 302 VVNLPHDAYKLLAVPPPIGGVLVICANTIHYHSESATYALALNNYAVSIDSSQELPRASF 361
Query: 923 --KVDANGERYLLGDLA------GRLFMLLLEKEEKMDGTFSVKEPKVELL 965
++DA +LL D+A G L +L L + ++ + + K +L
Sbjct: 362 SVELDAVKAAWLLNDVALLSAKNGELLLLSLVYDGRVVQRLDLSKSKASVL 412
>gi|154342093|ref|XP_001566998.1| putative CPSF-domain protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064323|emb|CAM40524.1| putative CPSF-domain protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1347
Score = 47.0 bits (110), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 1039 EDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDD----GKLQQIAEKEIKGA---CYSMCE 1091
ED ++G++ P+E + GR++ F + +L+ IA K+I GA C +
Sbjct: 917 EDWQHLLLVGSSFTFPDEQRARSGRVMWFALHEERQGQRLRLIASKDIGGALQCCAEVPY 976
Query: 1092 FNGKLLASINSTVRLFEWTNEKELRL---ECS---HFNNIIALFLKVKGDFILVG-DLMR 1144
+ G++ +N V L++W E + + C +I L+ +LV D+
Sbjct: 977 YKGRIALGVNGCVCLYKWNTEDQTFVAEERCRVGLTVTRLIPLYNTALAASVLVALDVRH 1036
Query: 1145 SLTLLQYKTMEGSFEEISRDYN 1166
S ++ ++GS + + R+ N
Sbjct: 1037 SAFFIEVDLLQGSLKVLCREGN 1058
>gi|66826737|ref|XP_646723.1| hypothetical protein DDB_G0270344 [Dictyostelium discoideum AX4]
gi|60474585|gb|EAL72522.1| hypothetical protein DDB_G0270344 [Dictyostelium discoideum AX4]
Length = 1547
Score = 47.0 bits (110), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 99/242 (40%), Gaps = 22/242 (9%)
Query: 128 LDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLV 187
L + F+ L D + K + N V ++E+F N IID D+ +Q +
Sbjct: 564 LKDDYFFILGDLSDGGIFKFDFK--SNNQSVEMIETFDNHGGIIDF---DVHKQKFSTKI 618
Query: 188 --TCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHT 244
C G GS+++I N I L GI +W + L + ++S V
Sbjct: 619 YSVCGGSNSFGSVKVIENSIPTNILGDNKLNGIPTNVWCFNPYIIIGLVESTLISQVDGG 678
Query: 245 RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSS--WE 302
G E + F ++Q T YC T LQVTP + IL + + ++ W
Sbjct: 679 GGSGGGGGSGEPDNLN-FLTNQPTIYCCRTSNGTFLQVTPKSIILYNCKYNVTKNTIRWN 737
Query: 303 PPNGKSIS---------VVSCNK-NQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACL 352
G I+ +VS +K N++L T D Y + + + +L+YE++C+
Sbjct: 738 TMEGSVITNSCSRDNLLLVSISKPNKLLSFTIQDNDY-DSSNFKFTPINDISLDYEISCI 796
Query: 353 DI 354
+
Sbjct: 797 SL 798
>gi|301103688|ref|XP_002900930.1| cleavage and polyadenylation specificity factor subunit, putative
[Phytophthora infestans T30-4]
gi|262101685|gb|EEY59737.1| cleavage and polyadenylation specificity factor subunit, putative
[Phytophthora infestans T30-4]
Length = 613
Score = 47.0 bits (110), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 21/157 (13%)
Query: 778 NGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQ----DVQFLHGC 833
N + A++D +V R N + ++P ++ + +R+ E+EI D+ FL G
Sbjct: 206 NTLNALLDKSVKVGAKRKRNHMSGLMP---NDITGREFLLRLREVEITGKVIDLAFLDGY 262
Query: 834 QNPTIICIHQDVN-----GRHVKTHE--------ISLKEKEFTKTPWKQDNIEMEASLVI 880
PT++ +H++ + GR + I++K + K W N+ + +I
Sbjct: 263 LEPTLMVLHEENDKNSTCGRLAVGFDTYCLTVISINMKTRLHPKI-WTVKNLPSDCFRLI 321
Query: 881 PVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSST 917
P PLGG +++ +ILY + + +A + S T
Sbjct: 322 PCRAPLGGVVVLSANAILYFNQTQFHGLATNVFASKT 358
>gi|308812436|ref|XP_003083525.1| UV-damaged DNA binding protein 1 (ISS) [Ostreococcus tauri]
gi|116055406|emb|CAL58074.1| UV-damaged DNA binding protein 1 (ISS), partial [Ostreococcus tauri]
Length = 265
Score = 46.6 bits (109), Expect = 0.079, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 1177 DDELFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHL 1216
DDE +LGAENS NLF ++ A +DE+R+ L+ G HL
Sbjct: 2 DDETYLGAENSLNLFTVSRNVNAVTDEERSRLEITGEYHL 41
>gi|222628488|gb|EEE60620.1| hypothetical protein OsJ_14038 [Oryza sativa Japonica Group]
Length = 1441
Score = 46.6 bits (109), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQ-----IAEKEIKGACYSMCEFNGKLL 1097
T +GTA V E+ + GR+++F + + Q + KE KGA ++ G LL
Sbjct: 1127 TLLAIGTAYVLGEDVAAR-GRVLLFSFTKSENSQNLVTEVYSKESKGAVSAVASLQGHLL 1185
Query: 1098 ASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS 1157
+ + L +WT EL + + + L + +F+L GD+ +S+ L +K
Sbjct: 1186 IASGPKITLNKWTG-AELTAVAFYDAPLHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQ 1244
Query: 1158 FEEISRDY 1165
+++D+
Sbjct: 1245 LSLLAKDF 1252
Score = 44.3 bits (103), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Query: 823 EIQDVQFLHGCQNPTIICIHQD---VNGRHVKTHE--------ISLKEKEFTKTPWKQDN 871
++D F+HG P ++ +H+ GR + H IS+ K+ W N
Sbjct: 250 HVKDFAFVHGYIEPVLVILHEQEPTWAGRILSKHHTCMISAFSISMTLKQH-PVIWSAAN 308
Query: 872 IEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAV-----------APQIIKSSTIVC 920
+ +A ++ VP P+ G ++I SI YHS + ++ +P+I KS+ V
Sbjct: 309 LPHDAYQLLAVPPPISGVLVICANSIHYHSQSTSCSLDLNNFSSHPDGSPEISKSNFQV- 367
Query: 921 YAKVDANGERYLLGDL------AGRLFMLLLEKEEKMDGTFSVKEPKVELL 965
++DA +L D+ AG + +L + + ++ + + K +L
Sbjct: 368 --ELDAAKATWLSNDIVMFSTKAGEMLLLTVVYDGRVVQRLDLMKSKASVL 416
Score = 40.4 bits (93), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 98/274 (35%), Gaps = 80/274 (29%)
Query: 88 AGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKL 147
AG + +L + + ++ + + K +L +T + N F+GSRLGDS LV+
Sbjct: 388 AGEMLLLTVVYDGRVVQRLDLMKSKASVLSS-----AVTSIGNSFFFLGSRLGDSLLVQF 442
Query: 148 N--------------RSPDENG-------------------------------------- 155
+ RS D G
Sbjct: 443 SYCASKSVLQDLTNERSADIEGDLPFSKRLKRIPSDVLQDVTSVEELSFQNIIAPNSLES 502
Query: 156 ----TYVSVMESFTNLAPIIDMV----------VVDLERQGQGQLVTCSGGFKEGSLRII 201
+Y+ V ++ N+ P+ D + +Q +LV CSG K GSL ++
Sbjct: 503 AQKISYI-VRDALINVGPLKDFSYGLRANADPNAMGNAKQSNYELVCCSGHGKNGSLSVL 561
Query: 202 RNGIGIEEHACIDLPGIKGIWALSIGSPKNL---DNT----LVLSFVGHTRVLTLSGAEV 254
+ I + ++LP +GIW + S + DN L++S T VL
Sbjct: 562 QQSIRPDLITEVELPSCRGIWTVYYKSYRGQMAEDNEYHAYLIISLENRTMVLETGDDLG 621
Query: 255 EETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAA 287
E TE + T GN+ R V+QV A
Sbjct: 622 EVTETVDYFVQASTIAAGNLFGRRRVIQVYGKGA 655
>gi|75145059|sp|Q7XWP1.2|CPSF1_ORYSJ RecName: Full=Probable cleavage and polyadenylation specificity
factor subunit 1; AltName: Full=Cleavage and
polyadenylation specificity factor 160 kDa subunit;
Short=CPSF 160 kDa subunit
gi|38345987|emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group]
Length = 1441
Score = 46.6 bits (109), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQ-----IAEKEIKGACYSMCEFNGKLL 1097
T +GTA V E+ + GR+++F + + Q + KE KGA ++ G LL
Sbjct: 1127 TLLAIGTAYVLGEDVAAR-GRVLLFSFTKSENSQNLVTEVYSKESKGAVSAVASLQGHLL 1185
Query: 1098 ASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS 1157
+ + L +WT EL + + + L + +F+L GD+ +S+ L +K
Sbjct: 1186 IASGPKITLNKWTG-AELTAVAFYDAPLHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQ 1244
Query: 1158 FEEISRDY 1165
+++D+
Sbjct: 1245 LSLLAKDF 1252
Score = 44.3 bits (103), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Query: 823 EIQDVQFLHGCQNPTIICIHQD---VNGRHVKTHE--------ISLKEKEFTKTPWKQDN 871
++D F+HG P ++ +H+ GR + H IS+ K+ W N
Sbjct: 250 HVKDFAFVHGYIEPVLVILHEQEPTWAGRILSKHHTCMISAFSISMTLKQH-PVIWSAAN 308
Query: 872 IEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAV-----------APQIIKSSTIVC 920
+ +A ++ VP P+ G ++I SI YHS + ++ +P+I KS+ V
Sbjct: 309 LPHDAYQLLAVPPPISGVLVICANSIHYHSQSTSCSLDLNNFSSHPDGSPEISKSNFQV- 367
Query: 921 YAKVDANGERYLLGDL------AGRLFMLLLEKEEKMDGTFSVKEPKVELL 965
++DA +L D+ AG + +L + + ++ + + K +L
Sbjct: 368 --ELDAAKATWLSNDIVMFSTKAGEMLLLTVVYDGRVVQRLDLMKSKASVL 416
Score = 40.4 bits (93), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 98/274 (35%), Gaps = 80/274 (29%)
Query: 88 AGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKL 147
AG + +L + + ++ + + K +L +T + N F+GSRLGDS LV+
Sbjct: 388 AGEMLLLTVVYDGRVVQRLDLMKSKASVLSS-----AVTSIGNSFFFLGSRLGDSLLVQF 442
Query: 148 N--------------RSPDENG-------------------------------------- 155
+ RS D G
Sbjct: 443 SYCASKSVLQDLTNERSADIEGDLPFSKRLKRIPSDVLQDVTSVEELSFQNIIAPNSLES 502
Query: 156 ----TYVSVMESFTNLAPIIDMV----------VVDLERQGQGQLVTCSGGFKEGSLRII 201
+Y+ V ++ N+ P+ D + +Q +LV CSG K GSL ++
Sbjct: 503 AQKISYI-VRDALINVGPLKDFSYGLRANADPNAMGNAKQSNYELVCCSGHGKNGSLSVL 561
Query: 202 RNGIGIEEHACIDLPGIKGIWALSIGSPKNL---DNT----LVLSFVGHTRVLTLSGAEV 254
+ I + ++LP +GIW + S + DN L++S T VL
Sbjct: 562 QQSIRPDLITEVELPSCRGIWTVYYKSYRGQMAEDNEYHAYLIISLENRTMVLETGDDLG 621
Query: 255 EETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAA 287
E TE + T GN+ R V+QV A
Sbjct: 622 EVTETVDYFVQASTIAAGNLFGRRRVIQVYGKGA 655
>gi|385305455|gb|EIF49426.1| nuclear mrna splicing [Dekkera bruxellensis AWRI1499]
Length = 570
Score = 46.6 bits (109), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 17/178 (9%)
Query: 166 NLAPIIDMV------VVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-I 218
NL P+ID V DL +++ G SL+I+ + I E +LP +
Sbjct: 61 NLNPVIDCTIHSSDNVTDLPV-----IISLCGSQSRSSLKILNHEIPYTEIVSQELPSKV 115
Query: 219 KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRT 278
+ ++A + + D + LSF T +L + G EVEE E GF +D T + +
Sbjct: 116 EAVFAFATHADDXNDKLIALSFYDETLLLKI-GEEVEEAENTGFKTDVATLAXAQLGNGS 174
Query: 279 VLQVTPSAAILISTESKAR---VSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEV 332
V+QV I + + W+ P G + + ++ QV+ A + ++ Y EV
Sbjct: 175 VVQVYADGXRQIFYDDDDKPVDTVDWKAPVGIEVLHGAVSETQVVLALSSREIAYFEV 232
>gi|328864890|gb|EGG13276.1| CPSF domain-containing protein [Dictyostelium fasciculatum]
Length = 1627
Score = 46.2 bits (108), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 18/116 (15%)
Query: 807 KDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVK-------------TH 853
KD++ + SI +E ++D+ FLHG PT++ +H+ + T
Sbjct: 300 KDSYIISLKSIGVEN--VKDLTFLHGYYEPTLLILHEPSQTWTARIAVKKLTSCLTAVTL 357
Query: 854 EISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVA 909
+S K++ W D++ ++ VPEPLGG+++I + Y S S A+A
Sbjct: 358 NLSQKQQSII---WSFDHMPYNCEKLLSVPEPLGGSLVITPNIMFYVSQSSRYALA 410
>gi|297722899|ref|NP_001173813.1| Os04g0252200 [Oryza sativa Japonica Group]
gi|255675253|dbj|BAH92541.1| Os04g0252200, partial [Oryza sativa Japonica Group]
Length = 432
Score = 46.2 bits (108), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQ-----IAEKEIKGACYSMCEFNGKLL 1097
T +GTA V E+ + GR+++F + + Q + KE KGA ++ G LL
Sbjct: 118 TLLAIGTAYVLGEDVAAR-GRVLLFSFTKSENSQNLVTEVYSKESKGAVSAVASLQGHLL 176
Query: 1098 ASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS 1157
+ + L +WT EL + + + L + +F+L GD+ +S+ L +K
Sbjct: 177 IASGPKITLNKWTG-AELTAVAFYDAPLHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQ 235
Query: 1158 FEEISRDY 1165
+++D+
Sbjct: 236 LSLLAKDF 243
>gi|256079900|ref|XP_002576222.1| cleavage and polyadenylation specificity factor cpsf [Schistosoma
mansoni]
Length = 1958
Score = 46.2 bits (108), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 42/181 (23%)
Query: 824 IQDVQFLHGCQNPTIICIHQD-------VNGRHVKTHEISLK---EKEFTKTPWKQDNIE 873
+ D+QFL+G PT++ +++ V+ R ++L +K W Q+++
Sbjct: 231 VLDMQFLYGFYEPTLLVLYEPIGTWAGRVSARRDTCCIVALSFNLQKRTNPVIWFQESLP 290
Query: 874 MEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDA------- 926
+ VI VP+P+GG +++ SILY P + CYA++
Sbjct: 291 FDCRSVISVPQPIGGVVVMAANSILYLKQTLPSCGLP-------LNCYAQISTNFPMRQD 343
Query: 927 -----------------NGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKV-ELLGEH 968
N ++L+G +G L++L L E+ S+ KV + H
Sbjct: 344 VPSCGPLSIDGCRVVTLNETQFLIGTRSGNLYLLSLWLEQATQTVTSLLFHKVGHAVPPH 403
Query: 969 C 969
C
Sbjct: 404 C 404
Score = 40.8 bits (94), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
++L+G +G L++L L E+ S+ KV G P C+ L++ +F+GSR
Sbjct: 364 QFLIGTRSGNLYLLSLWLEQATQTVTSLLFHKV---GHAVPPHCMVLLESKYLFIGSRFC 420
Query: 141 DSQLVKLNRS---PDENGTYV 158
DS L+K++ S D NG V
Sbjct: 421 DSVLMKIDYSLLCVDANGKEV 441
>gi|301093651|ref|XP_002997671.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110061|gb|EEY68113.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 478
Score = 46.2 bits (108), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 21/157 (13%)
Query: 778 NGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQ----DVQFLHGC 833
N + A++D +V R N + ++P + E +R+ E+EI D+ FL G
Sbjct: 71 NTLNALLDKSVKVGAKRKRNHMSGLMPNDITGREFL---LRLREVEITGKVIDLAFLDGY 127
Query: 834 QNPTIICIHQDVN-----GRHVKTHE--------ISLKEKEFTKTPWKQDNIEMEASLVI 880
PT++ +H++ + GR + I++K + K W N+ + +I
Sbjct: 128 LEPTLMVLHEENDKNSTCGRLAVGFDTYCLTVISINMKTRLHPKI-WTVKNLPSDCFRLI 186
Query: 881 PVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSST 917
P PLGG +++ +ILY + + +A + S T
Sbjct: 187 PCRAPLGGVVVLSANAILYFNQTQFHGLATNVFASKT 223
>gi|357162146|ref|XP_003579318.1| PREDICTED: probable cleavage and polyadenylation specificity factor
subunit 1-like [Brachypodium distachyon]
Length = 1442
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQ-----IAEKEIKGACYSMCEFNGKLL 1097
T +GTA V E+ + GR+++F + + Q + KE KGA ++ G L+
Sbjct: 1128 TLMAIGTAYVQGEDVAAR-GRVLLFSFTKSENSQNLVTEVYSKESKGAVSAVASLQGHLV 1186
Query: 1098 ASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS 1157
+ + L +W N EL + + + L + +F+L GD+ +S+ L +K
Sbjct: 1187 IASGPKITLNKW-NGSELTAVAFYDAPLHVVSLNIVKNFVLFGDIHKSVYFLSWKEQGSQ 1245
Query: 1158 FEEISRDY 1165
+++D+
Sbjct: 1246 LTLLAKDF 1253
Score = 45.1 bits (105), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 823 EIQDVQFLHGCQNPTIICIHQD-------VNGRH----VKTHEISLKEKEFTKTPWKQDN 871
++D F+HG P ++ +H+ ++ +H + IS+ K+ W N
Sbjct: 249 HVKDFTFVHGYIEPVLVILHEREPTWAGRISSKHHTCMISAFSISMTLKQHPMI-WSAAN 307
Query: 872 IEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVA 909
I +A ++ VP P+ G ++I SI YHS + ++A
Sbjct: 308 IPHDAYQILSVPPPISGVLVICANSIHYHSQSTSCSLA 345
Score = 40.4 bits (93), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 8/116 (6%)
Query: 180 RQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNL---DNT- 235
+Q +LV CSG K G+L +++ I + ++LP +GIW + S + DN
Sbjct: 539 KQSNYELVCCSGHGKNGALSVLQQSIRPDLITEVELPSCRGIWTVYYKSSRGHTTEDNEY 598
Query: 236 ---LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAA 287
L++S T VL E TE + T GN+ R V+QV + A
Sbjct: 599 HAYLIISLESRTMVLETGDDLGEVTETVDYYVQGATITAGNLFGRRRVIQVYATGA 654
>gi|353231025|emb|CCD77443.1| putative cleavage and polyadenylation specificity factor cpsf
[Schistosoma mansoni]
Length = 1825
Score = 46.2 bits (108), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 46/183 (25%)
Query: 824 IQDVQFLHGCQNPTIICIHQD-------VNGRHVKTHEISLK---EKEFTKTPWKQDNIE 873
+ D+QFL+G PT++ +++ V+ R ++L +K W Q+++
Sbjct: 214 VLDMQFLYGFYEPTLLVLYEPIGTWAGRVSARRDTCCIVALSFNLQKRTNPVIWFQESLP 273
Query: 874 MEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSS--TIVCYAKVDA----- 926
+ VI VP+P+GG +++ SILY Q + S + CYA++
Sbjct: 274 FDCRSVISVPQPIGGVVVMAANSILYLK---------QTLPSCGLPLNCYAQISTNFPMR 324
Query: 927 -------------------NGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKV-ELLG 966
N ++L+G +G L++L L E+ S+ KV +
Sbjct: 325 QDVPSCGPLSIDGCRVVTLNETQFLIGTRSGNLYLLSLWLEQATQTVTSLLFHKVGHAVP 384
Query: 967 EHC 969
HC
Sbjct: 385 PHC 387
Score = 40.4 bits (93), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
++L+G +G L++L L E+ S+ KV G P C+ L++ +F+GSR
Sbjct: 347 QFLIGTRSGNLYLLSLWLEQATQTVTSLLFHKV---GHAVPPHCMVLLESKYLFIGSRFC 403
Query: 141 DSQLVKLNRS---PDENGTYV 158
DS L+K++ S D NG V
Sbjct: 404 DSVLMKIDYSLLCVDANGKEV 424
>gi|49619061|gb|AAT68115.1| cleavage and polyadenylation specificity factor 1 [Danio rerio]
Length = 312
Score = 46.2 bits (108), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDNFE---------------LKASSIRMEELE----- 823
+DPE R + +Y ++P D L + I + EL+
Sbjct: 143 VDPENRCAVMLVYGTCLVVLPFRNDTLADEQEGIVGEGQKFSFLPSYIIDVRELDETLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D++FLHG PT++ + +Q GR + ISL ++ W N+
Sbjct: 203 IIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHPVIWSLSNLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + V+ VP+P+GG ++ S+LY
Sbjct: 263 FDCNQVMAVPKPIGGVVVFAVNSLLY 288
>gi|194756960|ref|XP_001960738.1| GF11349 [Drosophila ananassae]
gi|190622036|gb|EDV37560.1| GF11349 [Drosophila ananassae]
Length = 1455
Score = 46.2 bits (108), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 112/271 (41%), Gaps = 61/271 (22%)
Query: 690 NLVVAKNNRIEIHTVTP-------EGLRPVK-------------EIFLYGKIAVMKFFRG 729
NLVVA N ++++ + P + L P + LYG + ++
Sbjct: 29 NLVVAGANVLKVYRIAPNVEAGQRQKLNPTEMRVAPKMRLECLATYTLYGNVMSLQCVSL 88
Query: 730 PTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAII--DPE 787
+D L I + +L+ D L+ L+ + D G + + ++ DP+
Sbjct: 89 AGAMRDALLISFKDAKLSVLQHDPDTYALKTLSLHYFEEEDIRGGWTGRYFVPVVRVDPD 148
Query: 788 ARVIGLRLYNGLFKIIPLEKDN----FEL-------KASS-------------IRMEELE 823
+R + +Y ++P KDN EL KA + I + +L+
Sbjct: 149 SRCAVMLVYGKRLVVLPFRKDNTLDEIELADVKPIKKAPTAMVTRTPIMASYLIALRDLD 208
Query: 824 -----IQDVQFLHGCQNPTIICIHQDVN---GR-HVKTH-----EISLK-EKEFTKTPWK 868
+ D+QFLHG PT++ +++ V GR V++ ISL ++ W
Sbjct: 209 EKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSDTCVLVAISLNIQQRVHPIIWT 268
Query: 869 QDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
+++ + V P+ +P+GG +++ +++Y
Sbjct: 269 VNSLPFDCQQVYPIQKPIGGCLVMTVNAVIY 299
Score = 44.3 bits (103), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 160 VMESFTNLAPIIDMVV---VDLERQG-------------QGQLVTCSGGFKEGSLRIIRN 203
V +S N+API M V+ E G + +LV +G K G+L + N
Sbjct: 486 VCDSLINVAPINYMCAGERVEFEEDGTTLRPHAENLNDLKIELVAATGHSKNGALSVFVN 545
Query: 204 GIGIEEHACIDLPGIKGIW-----ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
I + +L G +W A S + + ++LS T VL +G E+ E E
Sbjct: 546 CINPQIITSFELDGCLDVWTVFDDATKKTSRHDQHDFMLLSQRNSTLVLQ-TGQEINEIE 604
Query: 259 MGGFTSDQQTFYCGNV-DPRTVLQVT 283
GFT +Q T + GN+ R ++QVT
Sbjct: 605 NTGFTVNQPTIFVGNLGQQRFIVQVT 630
Score = 40.0 bits (92), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
KL+++ +KE KG ++ + G L+ + + +++ + + + N + + V
Sbjct: 1172 KLKEVFKKEQKGPVSAISDVLGFLVTGLGQKIYIWQLRDGDLIGVAFIDTNIYVHQIITV 1231
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
K I + D+ +S++LL+++ + SRD+NP + IE + D LG
Sbjct: 1232 KS-LIFIADVYKSISLLRFQEEYRTLSLASRDFNPLEVYGIEFMVDNSNLG 1281
>gi|268581331|ref|XP_002645649.1| Hypothetical protein CBG07276 [Caenorhabditis briggsae]
Length = 983
Score = 46.2 bits (108), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 133 VFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGG 192
+F+GS + DSQL + R D T V+ +E NL PI D +V+ + ++VT SG
Sbjct: 285 IFIGSDVNDSQLFLIER--DMIYTVVATLE---NLGPIRD--IVERRTRTVQEIVTSSGE 337
Query: 193 FKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT-LVLSFVGHTRVLTLS- 250
KEG+LR I + +E + +I +P + ++ L+ S TR+ +S
Sbjct: 338 GKEGTLRFISPQLKMELKMERFVATSSASRCFAIKTPNSTSHSILICSTTSGTRIFRVSE 397
Query: 251 GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSW 301
AE++E + F ++ + + QVT S ++ +++ SW
Sbjct: 398 SAEIDEIQQHAFDVNKTLAASNICNSQHTCQVTDSFLRILQYNTES--DSW 446
>gi|341875688|gb|EGT31623.1| hypothetical protein CAEBREN_10779 [Caenorhabditis brenneri]
Length = 1162
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 105/522 (20%), Positives = 215/522 (41%), Gaps = 50/522 (9%)
Query: 63 HLLRGFSSLGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIP 122
HL F + ++ + ++G +G + +L L E + + +V V+ + S+
Sbjct: 274 HLQHPFKDISTVHLNANGSIMVGTTSGSIHILTLVPEAQT--SMAVSSINVKYVRNGSVL 331
Query: 123 ECLTYLDNGVVFVGSRLGDSQLVKLNRSPDE--NGTYVSVMESFTNLAPIIDMVVVDLER 180
L+ + N +VF GS G+S + + D + T V ESF + II M +D
Sbjct: 332 STLSTIRN-LVFAGSETGNSCWLGIEEKDDGTISSTRKHVFESFGPVKDIIVMPGLD--- 387
Query: 181 QGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSF 240
+ +++ G ++ ++R++RN + ++ + + ++ + +L IGS K D ++ S
Sbjct: 388 -DRMKIIALCGKQQDSTIRVLRNCVMLKSIKSVPVKKLETLHSLKIGSKK--DCWVLAST 444
Query: 241 VGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSS 300
T + ++ V + F S +T ++ P V+Q+TP+ A ++ +
Sbjct: 445 KNSTDLYNVTDEIVLKNNQDLF-SKTKTLVAADMGPY-VVQITPTFAHIMRILNGPMTEG 502
Query: 301 WEPPN----------GKSISVVSCNKNQVLCATG-CDVYYLEVHGSEIKQLA-----HRA 344
P KSI+V+ +++ A G C Y V ++ + R
Sbjct: 503 GVPLGHFSQDIQMDFSKSITVLDTIGQRIIVAVGDCIEAYKVVSTPDLTDVRLELENSRR 562
Query: 345 LEYEVACLDISPLSN-----EETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG 399
++VAC+ I S+ + S VG + +++L +L V + PL
Sbjct: 563 FAFKVACMAIHTTSSGLDPQSTSPSTSTPTVHLVVGFANSFNLLIMNLDTLITVKEIPLP 622
Query: 400 GEI-IPRSILMTCFEGHCYLLVALGDGSMFYF-SLDPASG--RLTDKKKVTLGTQPTVLK 455
+ P++++ + LV G ++++ + P + T ++ TQ +
Sbjct: 623 QYLSCPKAVIAVGSD-----LVLSGTSGLYHYENFQPQASPTEHTLQRIPGCSTQHQLFH 677
Query: 456 TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTF 515
F S R + K + V+ + + + S+ + + + ST
Sbjct: 678 VKSETPGIFAFEKSKRGVTLEQWASKATYPGVH--EASLVAGFCGYSFENHVVVYEGSTL 735
Query: 516 TFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
+ +I T+ LG+ ++A ++ TFGVIT RID
Sbjct: 736 SISSIYR----RAETIRLGDNATKMA-NNATVTFGVITHRID 772
>gi|301628217|ref|XP_002943254.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 [Xenopus (Silurana) tropicalis]
Length = 628
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 103/264 (39%), Gaps = 52/264 (19%)
Query: 687 TDLNLVVAKNNRIEIHTVTP------------------EGLRPVKEIFLYGKIAVMKFFR 728
++ NLVVA +++ ++ + P E L + +G + M +
Sbjct: 26 SERNLVVAGTSQLYVYRLNPNCESSSKGEKGSEVKGHKEKLELMASFSFFGNVMSMASVQ 85
Query: 729 GPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAH---GNVSDRIGKPSENGIIAIID 785
K+D L + + ++E +L+ L+ + + D + N + + D
Sbjct: 86 LAGAKRDALLLSFKEAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHNPKVRV-D 144
Query: 786 PEARVIGLRLYNGLFKIIPLEKDNFE---------------LKASSIRMEELE-----IQ 825
P R + +Y ++P +D L + I + EL+ I
Sbjct: 145 PSGRCAVMLIYGTQLVVLPFRRDTLAEEHDGLVGEGQKSSFLPSYIIDVRELDEKLLNII 204
Query: 826 DVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIEME 875
D+QFLHG PT++ + +Q GR + ISL ++ W N+ +
Sbjct: 205 DMQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHPVIWSLTNLPYD 264
Query: 876 ASLVIPVPEPLGGAIIIGQESILY 899
+ + VP+P+GG +I S+LY
Sbjct: 265 CTQALAVPKPIGGVVIFAVNSLLY 288
Score = 43.1 bits (100), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 22/127 (17%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-------------SIGSPK- 230
++V CSG K G+L +++ I + +LPG +W + +P
Sbjct: 499 EIVLCSGYGKNGALSVLQKSIRPQVVTTFELPGCHDMWTVISNHKKEEQEGEKEGETPPV 558
Query: 231 ------NLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTVLQVT 283
N L+LS T +L +G E+ E + GF + T Y GN+ D + ++QV+
Sbjct: 559 EAEEDTNRHGFLILSRDDSTMILQ-TGQEIMELDTSGFATQDPTVYAGNIGDNKYIVQVS 617
Query: 284 PSAAILI 290
P L+
Sbjct: 618 PRGIRLL 624
>gi|242075246|ref|XP_002447559.1| hypothetical protein SORBIDRAFT_06g003570 [Sorghum bicolor]
gi|241938742|gb|EES11887.1| hypothetical protein SORBIDRAFT_06g003570 [Sorghum bicolor]
Length = 389
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQ-----IAEKEIKGACYSMCEFNGKLL 1097
T +GTA V E+ + GR++++ + + Q + KE KGA ++ G LL
Sbjct: 75 TLMAIGTAYVQGEDVAAR-GRVLLYSFSRSENSQNLVTEVYSKESKGAVSAVASLQGHLL 133
Query: 1098 ASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS 1157
+ + L +WT EL + + + L + +F+L GD+ +S+ L +K
Sbjct: 134 IASGPKITLNKWTG-SELTAVAFYDAPLHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQ 192
Query: 1158 FEEISRDY 1165
+++D+
Sbjct: 193 LNLLAKDF 200
>gi|218194461|gb|EEC76888.1| hypothetical protein OsI_15095 [Oryza sativa Indica Group]
Length = 1503
Score = 45.8 bits (107), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 1043 TYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQ-----IAEKEIKGACYSMCEFNGKLL 1097
T +GTA V E+ + GR+++F + + Q + KE KGA ++ G LL
Sbjct: 1127 TLLAIGTAYVLGEDVAAR-GRVLLFSFMKSENSQNLVTEVYSKESKGAVSAVASLQGHLL 1185
Query: 1098 ASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS 1157
+ + L +WT EL + + + L + +F+L GD+ +S+ L +K
Sbjct: 1186 IASGPKITLNKWTG-AELTAVAFYDAPLHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQ 1244
Query: 1158 FEEISRDY 1165
+++D+
Sbjct: 1245 LSLLAKDF 1252
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 32/171 (18%)
Query: 823 EIQDVQFLHGCQNPTIICIHQD---VNGRHVKTHE--------ISLKEKEFTKTPWKQDN 871
++D F+HG P ++ +H+ GR + H IS+ K+ W N
Sbjct: 250 HVKDFAFVHGYIEPVLVILHEQEPTWAGRILSKHHTCMISAFSISMTLKQH-PVIWSAAN 308
Query: 872 IEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAV-----------APQIIKSSTIVC 920
+ +A ++ VP P+ G ++I SI YHS + ++ +P+I KS+ V
Sbjct: 309 LPHDAYQLLAVPPPISGVLVICANSIHYHSQSTSCSLDLNNFSSHPDGSPEISKSNFQV- 367
Query: 921 YAKVDANGERYLLGDL------AGRLFMLLLEKEEKMDGTFSVKEPKVELL 965
++DA + D+ AG + +L + + ++ + + K +L
Sbjct: 368 --ELDAAKATWFSNDIVMFSSKAGEMLLLTVVYDGRVVQRLDLMKSKASVL 416
Score = 40.4 bits (93), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 98/274 (35%), Gaps = 80/274 (29%)
Query: 88 AGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKL 147
AG + +L + + ++ + + K +L +T + N F+GSRLGDS LV+
Sbjct: 388 AGEMLLLTVVYDGRVVQRLDLMKSKASVLSS-----AVTSIGNSFFFLGSRLGDSLLVQF 442
Query: 148 N--------------RSPDENG-------------------------------------- 155
+ RS D G
Sbjct: 443 SYGASKSVLQDLTNERSADIEGDLPFSKRLKRIPSDVLQDVTSVEELSFQNIIAPNSLES 502
Query: 156 ----TYVSVMESFTNLAPIIDMV----------VVDLERQGQGQLVTCSGGFKEGSLRII 201
+Y+ V ++ N+ P+ D + +Q +LV CSG K GSL ++
Sbjct: 503 AQKISYI-VRDALINVGPLKDFSYGLRANADPNAMGNAKQSNYELVCCSGHGKNGSLSVL 561
Query: 202 RNGIGIEEHACIDLPGIKGIWALSIGSPKNL---DNT----LVLSFVGHTRVLTLSGAEV 254
+ I + ++LP +GIW + S + DN L++S T VL
Sbjct: 562 QQSIRPDLITEVELPSCRGIWTVYYKSYRGQMAEDNEYHAYLIISLENRTMVLETGDDLG 621
Query: 255 EETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAA 287
E TE + T GN+ R V+QV A
Sbjct: 622 EVTETVDYFVQASTIAAGNLFGRRRVIQVYGKGA 655
>gi|241060959|ref|XP_002408050.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
gi|215492346|gb|EEC01987.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
Length = 1241
Score = 45.8 bits (107), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 24/202 (11%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFHYDD-----------GKLQQIAEKEIKGACYSMCEF 1092
Y LGT + E+ +GRI I D K++ + KE KG ++ +
Sbjct: 916 YLALGTNYCYGEDVT-SRGRITILDIIDVVPEPGQPLTKNKIKIVYSKEQKGPVTALSQV 974
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
G LL++I + +++ + + + I + VK + ILVGD+ +S++LL+Y+
Sbjct: 975 VGFLLSAIGQKMYIWQLKDNGLVGVAFIDTQIYIHSVVTVK-NLILVGDVFKSVSLLRYQ 1033
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDE-----LFLGAENSYNLFICQKDSAATSDEDRTH 1207
+ +SRD P + ++E D L +E + L++ Q +S + R
Sbjct: 1034 EASRTLSLVSRDVRPLEVFAVEFFIDNSQMSFLVTDSERNMILYMYQPESRESCGGQR-- 1091
Query: 1208 LQEVGTVHL----VGDGLVQCR 1225
L G H+ V ++CR
Sbjct: 1092 LLRRGDFHIGSPVVSMFRIKCR 1113
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 97/257 (37%), Gaps = 71/257 (27%)
Query: 103 DGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRS------------ 150
DG SV+ + + +T + G +F+GSRLG+S L+
Sbjct: 204 DGMRSVRNFNFDKAAASVLTTSMTLCEEGYLFLGSRLGNSLLLHYTEKAAEMEEAGKKED 263
Query: 151 ------------PDENGTYVS--------------VMESFTNLAPIIDMVVVDL----ER 180
PDE Y S V +S N+ P + + + E
Sbjct: 264 KAEGDVNVALIDPDELEVYGSETLATKQLTSYTFEVCDSLINIGPCGKICMGEPAFLSEE 323
Query: 181 QGQG-----QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSP------ 229
Q +LVT +G K G+L +++ + + +LPG +W + +G P
Sbjct: 324 FTQNSDPDLELVTTAGYGKNGALCVLQRSVRPQVVTTFELPGCVHMWTV-MGPPTEKKKK 382
Query: 230 ------------KNLDNT---LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV 274
L NT L+LS + +L + E+ E + GF++ T + GN+
Sbjct: 383 EASEESDEQAADATLTNTHAFLILSRADSSMILQ-TDQEINELDHSGFSTQNPTVFAGNL 441
Query: 275 -DPRTVLQVTPSAAILI 290
D R VLQV P L+
Sbjct: 442 GDGRYVLQVCPMGVRLL 458
>gi|297810341|ref|XP_002873054.1| hypothetical protein ARALYDRAFT_908112 [Arabidopsis lyrata subsp.
lyrata]
gi|297318891|gb|EFH49313.1| hypothetical protein ARALYDRAFT_908112 [Arabidopsis lyrata subsp.
lyrata]
Length = 114
Score = 45.8 bits (107), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 1005 HNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQ 1061
H + +++ TF +L A+ L P E LS++S F D N Y+ +GT V PEE + +
Sbjct: 56 HFVRLLEDQTFNVLSAYTLDPYERGLSIVSCLFTADSNEYYCVGTEYVFPEEEDTEH 112
>gi|168021793|ref|XP_001763425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685218|gb|EDQ71614.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1452
Score = 45.4 bits (106), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Query: 1039 EDPNTYFVLGTAVVHPEENEPKQGRIIIFHY-----DDGKL-QQIAEKEIKGACYSMCEF 1092
+ T +GT+ V E+ K GRII+ D G +++ KE+KG+ ++
Sbjct: 1135 DQTQTLLAIGTSYVQGEDVAAK-GRIILVSVGKDPQDPGSWAREVYSKELKGSISAIASL 1193
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
G LL +I + L W N EL + + L + +FIL GD+ +S+ L +K
Sbjct: 1194 QGHLLIAIGPKIILHSW-NGSELNGAAFFDAPLYVVSLNIVKNFILFGDIHKSIYFLCWK 1252
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDD 1178
+++D+ + E L D
Sbjct: 1253 EDGAQLTLLAKDFGSLDCYATEFLID 1278
Score = 42.0 bits (97), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 25/149 (16%)
Query: 159 SVMESFTNLAPIIDMV----------VVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIE 208
+V +S N+ P+ D L +Q +LV CSG K GSL ++ I +
Sbjct: 518 TVRDSLVNICPLRDFAYGLRSNADQSATGLGKQSNYELVACSGHGKNGSLSVLHQSIRPD 577
Query: 209 EHACIDLPGIKGIWALSIGSPKNLDNT--------------LVLSFVGHTRVLTLSGAEV 254
+ LPG GIW + + ++ N L++S T VL
Sbjct: 578 LINKVALPGCSGIWTVYHKTDRDDSNEFDFGTSEDDEFHAYLIISLESRTMVLETGDTLG 637
Query: 255 EETEMGGFTSDQQTFYCGNV-DPRTVLQV 282
E TE + ++ T GN+ R V+QV
Sbjct: 638 EVTENVEYYTEGNTIAAGNLFGRRFVVQV 666
>gi|195056749|ref|XP_001995154.1| GH22991 [Drosophila grimshawi]
gi|193899360|gb|EDV98226.1| GH22991 [Drosophila grimshawi]
Length = 1426
Score = 45.4 bits (106), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 25/148 (16%)
Query: 160 VMESFTNLAPIIDMVV---VDLERQG-------------QGQLVTCSGGFKEGSLRIIRN 203
V +S N+API M V+ E G + +LV +G K G+L + N
Sbjct: 456 VCDSLINVAPINYMCAGERVEFEEDGATLRPHADNLNDLKIELVAATGHSKNGALSVFVN 515
Query: 204 GIGIEEHACIDLPGIKGIWAL-------SIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEE 256
I + +L G +W + + + ++ + ++LS T VL +G E+ E
Sbjct: 516 CINPQIITSFELEGCLDVWTVFDDATRKATTARQDQHDFMLLSQRSSTLVLQ-TGQEINE 574
Query: 257 TEMGGFTSDQQTFYCGNV-DPRTVLQVT 283
E GFT +Q T Y GN+ R ++QVT
Sbjct: 575 IENTGFTVNQPTIYVGNLGQQRFIVQVT 602
Score = 41.2 bits (95), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 110/272 (40%), Gaps = 44/272 (16%)
Query: 930 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPGSTKQ 989
R L+ R++ L+ +KEE M + EL E C+G +I P +
Sbjct: 1007 RQLVYHRENRVYCLITQKEEPMTKYYRFNGEDKEL-SEECRGE-------RFIYPIGS-- 1056
Query: 990 STANQPADFNMEVEVHNLLIIDQNTFEIL--HAHQLFPGEYALSLISSKFGEDPNT---- 1043
+ +++I T+EI+ + Q P E+ + K +
Sbjct: 1057 --------------LFEMVLISPETWEIVPDASIQFEPWEHVTAFKIVKLSYEGTRSGLK 1102
Query: 1044 -YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCE 1091
Y +GT + E+ + G I I+ KL+++ +KE KG ++ +
Sbjct: 1103 EYLCIGTNFNYSEDITSR-GNIHIYDIIEVVPEPGKPMTKFKLKEVFKKEQKGPVSAISD 1161
Query: 1092 FNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY 1151
G L+ + + +++ + + + N + + VK I + D+ +S++LL++
Sbjct: 1162 VVGFLVTGLGQKIYIWQLRDGDLIGVAFIDTNIYVHQIITVKS-LIFIADVYKSISLLRF 1220
Query: 1152 KTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
+ + SRD+NP + IE + D LG
Sbjct: 1221 QEEHRTLSLASRDFNPMEVFGIEFMVDNSNLG 1252
>gi|430814208|emb|CCJ28535.1| unnamed protein product [Pneumocystis jirovecii]
Length = 134
Score = 45.4 bits (106), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 690 NLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKI-AVMKFFRGPTDKKDLLFIITQRYNAMI 748
+LV+A NRIEI+T++ +GL+ E + GK+ A++ + D LFI+T+
Sbjct: 28 SLVIA--NRIEIYTLSTQGLKHAHEFTINGKVSAILSYKPHIGSDTDHLFIVTEECVYFT 85
Query: 749 LECRGDIDNL--EILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRL 795
L + L EIL K +V D + ++ G ++IIDP+ R I L++
Sbjct: 86 LSWDRIKNRLCNEILIK---DVFDPSLRTTDCGHLSIIDPDYRAIALKI 131
>gi|195455711|ref|XP_002074834.1| GK23274 [Drosophila willistoni]
gi|194170919|gb|EDW85820.1| GK23274 [Drosophila willistoni]
Length = 1463
Score = 45.4 bits (106), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 39/155 (25%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN----FEL-------KASS-------------IRM 819
+DP+AR + +Y ++P KDN EL KA + I +
Sbjct: 147 VDPDARCAVMLIYGKRLVVLPFRKDNSLDEIELADVKPIKKAPTALVTRTPIMASYLIAL 206
Query: 820 EELE-----IQDVQFLHGCQNPTIICIHQDVN---GR-HVKTH-----EISLK-EKEFTK 864
+L+ + D+QFLHG PT++ +++ V GR V++ ISL ++
Sbjct: 207 RDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCAGRIKVRSDTCVLVAISLNIQQRVHP 266
Query: 865 TPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
W +N+ + ++P+ +P+GG +++ +++Y
Sbjct: 267 IIWTVNNLPFDCLRLLPIQKPIGGCLVMTVNAVIY 301
Score = 44.7 bits (104), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 160 VMESFTNLAPIIDMVV---VDLERQG-------------QGQLVTCSGGFKEGSLRIIRN 203
V +S N+API M V+ E G + +LV +G K G+L + N
Sbjct: 491 VCDSLINVAPINYMCAGERVEFEEDGTTLRPHAESLQDVKIELVAATGHSKNGALSVFVN 550
Query: 204 GIGIEEHACIDLPGIKGIW-----ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
I + +L G +W A S ++ + ++LS T VL +G E+ E E
Sbjct: 551 CINPQIITSFELEGCLDVWTVFDDATKKTSRQDQHDFMLLSQKNSTLVLQ-TGQEINEIE 609
Query: 259 MGGFTSDQQTFYCGNV-DPRTVLQVT 283
GFT +Q T + GN+ R ++QVT
Sbjct: 610 NTGFTVNQATIFVGNLGQNRFIVQVT 635
Score = 40.4 bits (93), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
KL+++ +KE KG ++ + G L+ + + +++ + + + N + + V
Sbjct: 1180 KLKEVFKKEQKGPVSAISDVLGFLVTGLGQKIYIWQLRDGDLIGVAFIDTNIYVHQIITV 1239
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG-----AENS 1187
K I + D+ +S++LL+++ + SRD+NP + IE + D LG AE++
Sbjct: 1240 KS-LIFIADVYKSISLLRFQEEYRTLSLASRDFNPLEVYGIEFMVDNTNLGFLVTDAESN 1298
Query: 1188 YNLFICQKDS 1197
+++ Q ++
Sbjct: 1299 LIVYMYQPEA 1308
>gi|195583398|ref|XP_002081509.1| GD25678 [Drosophila simulans]
gi|194193518|gb|EDX07094.1| GD25678 [Drosophila simulans]
Length = 1450
Score = 45.4 bits (106), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 61/273 (22%)
Query: 688 DLNLVVAKNNRIEIHTVTP-------EGLRP-------------VKEIFLYGKIAVMKFF 727
D NLVVA N ++++ + P + L P + LYG + ++
Sbjct: 27 DENLVVAGANVLKVYRIAPNVEASQRQKLNPSEMRLAPKMRLECLATYTLYGNVMSLQCV 86
Query: 728 RGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAII--D 785
+D L I + +L+ D L+ L+ + D G + + + D
Sbjct: 87 SLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFEEDDIRGGWTGRYFVPTVRVD 146
Query: 786 PEARVIGLRLYNGLFKIIPLEKDN----FEL-------KASS-------------IRMEE 821
P++R + +Y ++P KDN EL KA + I + +
Sbjct: 147 PDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAPTAMVSRTPIMASYLIALRD 206
Query: 822 LE-----IQDVQFLHGCQNPTIICIHQDVN---GR-HVKTH-----EISLK-EKEFTKTP 866
L+ + D+QFLHG PT++ +++ V GR V++ ISL ++
Sbjct: 207 LDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSDTCVLVAISLNIQQRVHPII 266
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
W +++ + V P+ +P+GG +++ +++Y
Sbjct: 267 WTVNSLPFDCLQVYPIQKPIGGCLVMTVNAVIY 299
Score = 43.9 bits (102), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 160 VMESFTNLAPIIDMVV---VDLERQG-------------QGQLVTCSGGFKEGSLRIIRN 203
V +S N+API M V+ E G + +LV +G K G+L + N
Sbjct: 486 VCDSLMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFVN 545
Query: 204 GIGIEEHACIDLPGIKGIW-----ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
+ + +L G +W A S + + ++LS T VL +G E+ E E
Sbjct: 546 CLNPQIITSFELDGCLDVWTVFDDATKKSSRNDQHDFMLLSQRNSTLVLQ-TGQEINEIE 604
Query: 259 MGGFTSDQQTFYCGNV-DPRTVLQVT 283
GFT +Q T + GN+ R ++QVT
Sbjct: 605 NTGFTVNQPTIFVGNLGQQRFIVQVT 630
>gi|427780291|gb|JAA55597.1| Putative mrna cleavage and polyadenylation factor ii complex subunit
cft1 cpsf subunit [Rhipicephalus pulchellus]
Length = 1237
Score = 45.4 bits (106), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
K++ + KE KG ++ + G LL++I + +++ + + + + I + V
Sbjct: 951 KIKIVYSKEQKGPVTALSQVVGFLLSAIGQKIYIWQLKDNELVGVAFIDTQIYIHSVVTV 1010
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE-----LFLGAENS 1187
K + ILVGD+ +S++LL+Y+ + +SRD P + ++E D L AE +
Sbjct: 1011 K-NLILVGDVFKSVSLLRYQEASRTLSLVSRDVRPLEVYAVEFFIDNTQMSFLVTDAERN 1069
Query: 1188 YNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLV-----QCR 1225
L++ Q +S + R L G H VG +V +CR
Sbjct: 1070 LLLYMYQPESRESCGGQR--LLRRGDFH-VGSPVVSMFRIKCR 1109
>gi|9794904|gb|AAF98386.1| cleavage and polyadenylation specificity factor [Drosophila
melanogaster]
Length = 507
Score = 45.1 bits (105), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 61/273 (22%)
Query: 688 DLNLVVAKNNRIEIHTVTP-------EGLRP-------------VKEIFLYGKIAVMKFF 727
D NLVVA N ++++ + P + L P + LYG + ++
Sbjct: 27 DENLVVAGANVLKVYRIAPNVEASQRQKLNPSEMRLAPKMRLECLATYTLYGNVMSLQCV 86
Query: 728 RGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAII--D 785
+D L I + +L+ D L+ L+ + D G + + + D
Sbjct: 87 SLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFEEDDIRGGWTGRYFVPTVRVD 146
Query: 786 PEARVIGLRLYNGLFKIIPLEKDN----FEL-------KASS-------------IRMEE 821
P++R + +Y ++P KDN EL KA + I + +
Sbjct: 147 PDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAPTAMVSRTPIMASYLIALRD 206
Query: 822 LE-----IQDVQFLHGCQNPTIICIHQDVN---GR-HVKTH-----EISLK-EKEFTKTP 866
L+ + D+QFLHG PT++ +++ V GR V++ ISL ++
Sbjct: 207 LDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSDTCVLVAISLNIQQRVHPII 266
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
W +++ + V P+ +P+GG +++ +++Y
Sbjct: 267 WTVNSLPFDCLQVYPIQKPIGGCLVMTVNAVIY 299
>gi|345482082|ref|XP_001607052.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Nasonia vitripennis]
Length = 1415
Score = 45.1 bits (105), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 33/152 (21%)
Query: 781 IAIIDPEARVIGLRLYNGLFKIIPLEKDNF--------ELKASS----------IRMEEL 822
I +DPE R + +Y ++P KD K+SS I ++ L
Sbjct: 139 IVRVDPEGRCAVMLIYGRKLVVLPFRKDPILDEGDLIENPKSSSHKTPILSSYMIVLKSL 198
Query: 823 E-----IQDVQFLHGCQNPTIICIHQDVN---GRHVKTHE------ISLK-EKEFTKTPW 867
E I D+QFLHG PT++ +++ V GR + ISL +++ W
Sbjct: 199 EEKMDNIIDLQFLHGYYEPTLLILYEPVRTFAGRIAVRQDTCAMVAISLNIQQKVHPIIW 258
Query: 868 KQDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
N+ + + V +PLGG +I+ S++Y
Sbjct: 259 SVSNLPFDCYQAVAVKKPLGGTLIMAVNSLIY 290
Score = 45.1 bits (105), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 16/187 (8%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
Y V+GT + E+ + GRI IF + +QI KE KG ++ +
Sbjct: 1091 YIVIGTNYNYGEDITSR-GRIFIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPVTAITQV 1149
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
+G L+++I + +++ + + + + L +K ILV D+ +S++LL+++
Sbjct: 1150 SGFLVSAIGQKIYIWQLKDNDLVGVAFIDTQIYVCQMLSIKS-LILVADVYKSVSLLRFQ 1208
Query: 1153 TMEGSFEEISRDYNPNWMTSIE--ILDDEL-FLGAENSYNLFICQKDSAATSDEDRTHLQ 1209
+ +SRD+ + +IE I ++EL F+ A+ N+ I ++ L
Sbjct: 1209 PEYKTLSLVSRDFRTTEIYAIEYFIQNNELGFIVADGESNISIFSYQPESSQSLGGQKLI 1268
Query: 1210 EVGTVHL 1216
+HL
Sbjct: 1269 RKADIHL 1275
Score = 40.4 bits (93), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL---SIGSPKNLDNT------ 235
+LVT SG K G+L +++ I + DLPG + IW + ++ + T
Sbjct: 505 ELVTTSGYGKNGALCVLQRSIRPQVITTFDLPGYENIWTVIDSTVSDNRAKTETEGTHGF 564
Query: 236 LVLSFVGHTRVLTLSGAEVEE-TEMGGFTSDQQTFYCGNVDP-RTVLQVT 283
L+L+ T VL +G E+ E + GF++ T + GN+ R ++QVT
Sbjct: 565 LILTQDDSTMVLQ-TGQEINEVVDQSGFSTQGTTIFAGNLGSNRYIIQVT 613
>gi|312380158|gb|EFR26239.1| hypothetical protein AND_07834 [Anopheles darlingi]
Length = 1503
Score = 45.1 bits (105), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 1059 PKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLE 1118
P+ G+ + H K +++ K+ KG ++ G L+ ++ V L++ ++ + +
Sbjct: 1161 PEPGKPLTKH----KFKEVIVKDQKGPVSAISHVCGFLVGAVGQKVYLWQMKDDDLVGVA 1216
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
N + + +K ILV D+ +S++LL+++ + +SRDY+P + +E + D
Sbjct: 1217 FIDTNIFVHQMVSIKS-LILVADVYKSVSLLRFQDEFRTLSLVSRDYHPLNVYQVEYVVD 1275
Query: 1179 EL---FLGAENSYNL--FICQKDSAATSDEDRTHLQEVGTVHL 1216
FL A++ NL ++ Q +S + R L G HL
Sbjct: 1276 NTNLGFLVADDQANLITYMYQPESRESFGGQR--LLRKGDYHL 1316
Score = 42.0 bits (97), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/301 (17%), Positives = 121/301 (40%), Gaps = 66/301 (21%)
Query: 663 KIAVMKFFRGPTDKKDLLFIIT----QRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIF-- 716
+++ +F + P + + F +T ++ +LV N ++++ + P+ +E +
Sbjct: 11 RVSTSQFLKEPHEPTAVEFSLTCHFFNHSEKSLVTGGANVLKVYRIIPDADPATREKYSA 70
Query: 717 ---------------LYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEIL 761
L+G I ++ ++D L I +A + + D DN ++
Sbjct: 71 TRPPNMKLECMASYRLFGNIMSLQSVSLAGSQRDALLISFP--DAKLSVVQFDPDNFDLK 128
Query: 762 TKAHGNVSDRIGKPSENGIIAI----IDPEARVIGLRLYNGLFKIIPLEKDNFE------ 811
T + D + G I +DP+ R + +Y ++P KD+
Sbjct: 129 TLSLHYFEDEDIRGGWTGHYHIPLVRVDPDNRCAVMLVYGRKLVVLPFRKDSSLDEIEMQ 188
Query: 812 ------------------LKASSIRMEELE-----IQDVQFLHGCQNPTIICIHQDVN-- 846
L + I +++L+ + DVQFLHG PT++ +++ V
Sbjct: 189 DVKPIKKTPTLLIAKTPILASYIIELKDLDEKIDNVIDVQFLHGYYEPTLLILYEPVRTF 248
Query: 847 -GR-HVKTHEISLK------EKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESIL 898
GR V++ ++ ++ W +++ + +P+ +P+GG +++ S++
Sbjct: 249 PGRIAVRSDTCTMVALSLNIQQRVHPVIWTVNSLPFDCLQAVPISKPIGGCLVMCVNSLI 308
Query: 899 Y 899
Y
Sbjct: 309 Y 309
>gi|195485994|ref|XP_002091320.1| GE12310 [Drosophila yakuba]
gi|194177421|gb|EDW91032.1| GE12310 [Drosophila yakuba]
Length = 1455
Score = 45.1 bits (105), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 160 VMESFTNLAPIIDMVV---VDLERQGQG-------------QLVTCSGGFKEGSLRIIRN 203
V +S N+API M V+ E G +LV +G K G+L + N
Sbjct: 486 VCDSLMNVAPINYMCAGERVEFEEDGATLRPHAESLQDLKIELVAATGHSKNGALSVFVN 545
Query: 204 GIGIEEHACIDLPGIKGIW-----ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
I + +L G +W A S + + ++LS T VL +G E+ E E
Sbjct: 546 CINPQIITSFELDGCLDVWTVFDDATKKSSRNDQHDFMLLSQRNSTLVLQ-TGQEINEIE 604
Query: 259 MGGFTSDQQTFYCGNV-DPRTVLQVT 283
GFT +Q T + GN+ R ++QVT
Sbjct: 605 NTGFTVNQPTIFVGNLGQQRFIVQVT 630
Score = 43.9 bits (102), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 111/271 (40%), Gaps = 61/271 (22%)
Query: 690 NLVVAKNNRIEIHTVTP-------EGLRP-------------VKEIFLYGKIAVMKFFRG 729
NLVVA N ++++ + P + L P + LYG + ++
Sbjct: 29 NLVVAGANVLKVYRIAPNVEAGQRQKLNPSEMRLAPKMRLECLATYTLYGNVMSLQCVSL 88
Query: 730 PTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAII--DPE 787
+D L I + +L+ D L+ L+ + D G + + + DP+
Sbjct: 89 AGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFEEDDIRGGWTGRYFVPTVRVDPD 148
Query: 788 ARVIGLRLYNGLFKIIPLEKDN----FEL-------KASS-------------IRMEELE 823
+R + +Y ++P KDN EL KA + I + +L+
Sbjct: 149 SRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAPTAMVSRTPIMASYLIALRDLD 208
Query: 824 -----IQDVQFLHGCQNPTIICIHQDVN---GR-HVKTH-----EISLK-EKEFTKTPWK 868
+ D+QFLHG PT++ +++ V GR V++ ISL ++ W
Sbjct: 209 EKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSDTCVLVAISLNIQQRVHPIIWT 268
Query: 869 QDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
+++ + V P+ +P+GG +++ +++Y
Sbjct: 269 VNSLPFDCLQVYPIQKPIGGCLVMTVNAVIY 299
>gi|45552619|ref|NP_995833.1| cleavage and polyadenylation specificity factor 160, isoform A
[Drosophila melanogaster]
gi|18203551|sp|Q9V726.1|CPSF1_DROME RecName: Full=Cleavage and polyadenylation specificity factor
subunit 1; AltName: Full=Cleavage and polyadenylation
specificity factor 160 kDa subunit; Short=CPSF 160 kDa
subunit; Short=dCPSF 160
gi|7303176|gb|AAF58240.1| cleavage and polyadenylation specificity factor 160, isoform A
[Drosophila melanogaster]
Length = 1455
Score = 45.1 bits (105), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 61/273 (22%)
Query: 688 DLNLVVAKNNRIEIHTVTP-------EGLRP-------------VKEIFLYGKIAVMKFF 727
D NLVVA N ++++ + P + L P + LYG + ++
Sbjct: 27 DENLVVAGANVLKVYRIAPNVEASQRQKLNPSEMRLAPKMRLECLATYTLYGNVMSLQCV 86
Query: 728 RGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAII--D 785
+D L I + +L+ D L+ L+ + D G + + + D
Sbjct: 87 SLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFEEDDIRGGWTGRYFVPTVRVD 146
Query: 786 PEARVIGLRLYNGLFKIIPLEKDN----FEL-------KASS-------------IRMEE 821
P++R + +Y ++P KDN EL KA + I + +
Sbjct: 147 PDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAPTAMVSRTPIMASYLIALRD 206
Query: 822 LE-----IQDVQFLHGCQNPTIICIHQDVN---GR-HVKTH-----EISLK-EKEFTKTP 866
L+ + D+QFLHG PT++ +++ V GR V++ ISL ++
Sbjct: 207 LDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSDTCVLVAISLNIQQRVHPII 266
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
W +++ + V P+ +P+GG +++ +++Y
Sbjct: 267 WTVNSLPFDCLQVYPIQKPIGGCLVMTVNAVIY 299
Score = 45.1 bits (105), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 160 VMESFTNLAPIIDMVV---VDLERQG-------------QGQLVTCSGGFKEGSLRIIRN 203
V +S N+API M V+ E G + +LV +G K G+L + N
Sbjct: 486 VCDSLMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFVN 545
Query: 204 GIGIEEHACIDLPGIKGIW-----ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
I + +L G +W A S + + ++LS T VL +G E+ E E
Sbjct: 546 CINPQIITSFELDGCLDVWTVFDDATKKSSRNDQHDFMLLSQRNSTLVLQ-TGQEINEIE 604
Query: 259 MGGFTSDQQTFYCGNV-DPRTVLQVT 283
GFT +Q T + GN+ R ++QVT
Sbjct: 605 NTGFTVNQPTIFVGNLGQQRFIVQVT 630
>gi|358338426|dbj|GAA28838.2| cleavage and polyadenylation specificity factor subunit 1
[Clonorchis sinensis]
Length = 1741
Score = 45.1 bits (105), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 21/116 (18%)
Query: 824 IQDVQFLHGCQNPTIICIHQD-------VNGRHVKTHEISLK---EKEFTKTPWKQDNIE 873
+ D+QFL+G PT++ +++ V+ R ++L +K W Q+++
Sbjct: 158 VLDMQFLNGFYEPTLLVLYEPIGTWAGRVSARRDTCCIVALSFNLQKRTNPVIWFQESLP 217
Query: 874 MEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIV--CYAKVDAN 927
+ + V VPEP+GG +I+ SI+Y Q + S + CYA+V N
Sbjct: 218 YDCTYVHSVPEPIGGVLILATNSIIYMK---------QTLPSCGLPLNCYAQVTTN 264
>gi|195334368|ref|XP_002033855.1| GM20208 [Drosophila sechellia]
gi|194125825|gb|EDW47868.1| GM20208 [Drosophila sechellia]
Length = 1455
Score = 45.1 bits (105), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 61/273 (22%)
Query: 688 DLNLVVAKNNRIEIHTVTP-------EGLRP-------------VKEIFLYGKIAVMKFF 727
D NLVVA N ++++ + P + L P + LYG + ++
Sbjct: 27 DENLVVAGANVLKVYRIAPNVEASQRQKLNPSEMRLAPKMRLECLATYTLYGNVMSLQCV 86
Query: 728 RGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAII--D 785
+D L I + +L+ D L+ L+ + D G + + + D
Sbjct: 87 SLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFEEDDIRGGWTGRYFVPTVRVD 146
Query: 786 PEARVIGLRLYNGLFKIIPLEKDN----FEL-------KASS-------------IRMEE 821
P++R + +Y ++P KDN EL KA + I + +
Sbjct: 147 PDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAPTAMVSRTPIMASYLIALRD 206
Query: 822 LE-----IQDVQFLHGCQNPTIICIHQDVN---GR-HVKTH-----EISLK-EKEFTKTP 866
L+ + D+QFLHG PT++ +++ V GR V++ ISL ++
Sbjct: 207 LDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSDTCVLVAISLNIQQRVHPII 266
Query: 867 WKQDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
W +++ + V P+ +P+GG +++ +++Y
Sbjct: 267 WTVNSLPFDCLQVYPIQKPIGGCLVMTVNAVIY 299
Score = 43.5 bits (101), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 160 VMESFTNLAPIIDMVV---VDLERQG-------------QGQLVTCSGGFKEGSLRIIRN 203
V +S N+API M V+ E G + +LV +G K G+L + N
Sbjct: 486 VCDSLMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFVN 545
Query: 204 GIGIEEHACIDLPGIKGIW-----ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
+ + +L G +W A S + + + LS T VL +G E+ E E
Sbjct: 546 CLNPQIITSFELDGCLDVWTVFDDATKKSSRNDQHDFMFLSQRNSTLVLQ-TGQEINEIE 604
Query: 259 MGGFTSDQQTFYCGNV-DPRTVLQVT 283
GFT +Q T + GN+ R ++QVT
Sbjct: 605 NTGFTVNQPTIFVGNLGQQRFIVQVT 630
>gi|427795803|gb|JAA63353.1| Putative mrna cleavage and polyadenylation factor ii complex subunit
cft1 cpsf subunit, partial [Rhipicephalus pulchellus]
Length = 726
Score = 45.1 bits (105), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
K++ + KE KG ++ + G LL++I + +++ + + + + I + V
Sbjct: 440 KIKIVYSKEQKGPVTALSQVVGFLLSAIGQKIYIWQLKDNELVGVAFIDTQIYIHSVVTV 499
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE-----LFLGAENS 1187
K + ILVGD+ +S++LL+Y+ + +SRD P + ++E D L AE +
Sbjct: 500 K-NLILVGDVFKSVSLLRYQEASRTLSLVSRDVRPLEVYAVEFFIDNTQMSFLVTDAERN 558
Query: 1188 YNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLV-----QCR 1225
L++ Q +S + R L G H VG +V +CR
Sbjct: 559 LLLYMYQPESRESCGGQR--LLRRGDFH-VGSPVVSMFRIKCR 598
>gi|24653655|ref|NP_725397.1| cleavage and polyadenylation specificity factor 160, isoform B
[Drosophila melanogaster]
gi|15292103|gb|AAK93320.1| LD38533p [Drosophila melanogaster]
gi|21627189|gb|AAM68553.1| cleavage and polyadenylation specificity factor 160, isoform B
[Drosophila melanogaster]
Length = 1420
Score = 45.1 bits (105), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 160 VMESFTNLAPIIDMVV---VDLERQG-------------QGQLVTCSGGFKEGSLRIIRN 203
V +S N+API M V+ E G + +LV +G K G+L + N
Sbjct: 451 VCDSLMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFVN 510
Query: 204 GIGIEEHACIDLPGIKGIW-----ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
I + +L G +W A S + + ++LS T VL +G E+ E E
Sbjct: 511 CINPQIITSFELDGCLDVWTVFDDATKKSSRNDQHDFMLLSQRNSTLVLQ-TGQEINEIE 569
Query: 259 MGGFTSDQQTFYCGNV-DPRTVLQVT 283
GFT +Q T + GN+ R ++QVT
Sbjct: 570 NTGFTVNQPTIFVGNLGQQRFIVQVT 595
>gi|260835071|ref|XP_002612533.1| hypothetical protein BRAFLDRAFT_120973 [Branchiostoma floridae]
gi|229297910|gb|EEN68542.1| hypothetical protein BRAFLDRAFT_120973 [Branchiostoma floridae]
Length = 1003
Score = 45.1 bits (105), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 58/222 (26%)
Query: 125 LTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYV--------SVMESFTNLAPIIDMVVV 176
+ L G +F+GSRLG+S L+K E T + V +S N+ P + +
Sbjct: 1 MCMLSPGYLFLGSRLGNSLLLKYTEKALEGDTGILDTADKVGEVCDSIMNIGPCGRVTMG 60
Query: 177 DLERQGQG---------QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIG 227
+ + +LVT G K G+L +++ I + DLPG +W + IG
Sbjct: 61 EPAFLSEEFADNPDPDIELVTTCGYGKNGALAVLQRSIRPQVVTTFDLPGCLDMWTV-IG 119
Query: 228 SPK-----------------------------------NLDNT---LVLSFVGHTRVLTL 249
P +L N+ L+LS T VL
Sbjct: 120 IPPESKPQEEGEKAESAGSEEKPEGEKEETKEEGPPDVDLTNSHGFLILSREDSTMVLQ- 178
Query: 250 SGAEVEETEMGGFTSDQQTFYCGNV-DPRTVLQVTPSAAILI 290
+G E+ E + GF++ T Y GN+ + + ++QV+P L+
Sbjct: 179 TGKEIMELDHSGFSTQGPTVYAGNIGNNKYIIQVSPYGIRLL 220
>gi|397582898|gb|EJK52454.1| hypothetical protein THAOC_28264, partial [Thalassiosira oceanica]
Length = 353
Score = 44.7 bits (104), Expect = 0.30, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 43/162 (26%)
Query: 690 NLVVAKNNRIEIHTVTP--------------EGLRPVKEIFLYGKIAVMKFFRGPTDKKD 735
+LVVAK++R+E+ TV E L V + + G+I+ + R +++D
Sbjct: 55 DLVVAKSDRLEVRTVRQPDSSGAGPDEGDGGEALPVVLSLPVNGRISTLSSVRFADERRD 114
Query: 736 LLFIITQRYNAMIL----ECRGDI-------------------DNLEILTKAHGNVSD-- 770
LF+ T+R + ++ E D+ ++ + T A G D
Sbjct: 115 CLFLTTERGDYALISHDAELASDLAAGRNKSDGSGSGGPDIVGEHHPVATHASGTFRDAD 174
Query: 771 ----RIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD 808
G+ +E G I +DP R I + +Y+G IIP+ D
Sbjct: 175 GHALSGGREAEVGPILAVDPLMRCIAVHVYDGFATIIPIHWD 216
>gi|38014465|gb|AAH60475.1| LOC398931 protein, partial [Xenopus laevis]
Length = 363
Score = 44.7 bits (104), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 104/263 (39%), Gaps = 50/263 (19%)
Query: 687 TDLNLVVAKNNRIEIHTVTP------------------EGLRPVKEIFLYGKIAVMKFFR 728
++ NLVVA +++ ++ + P E L + +G I M +
Sbjct: 26 SERNLVVAGTSQLYVYRLNPSSESSSKGESVSEVKGHKEKLELMASFSFFGNIMSMASVQ 85
Query: 729 GPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSD-RIGKPSENGIIAI-IDP 786
K+D L + + ++E +L+ L+ + + R G I + +DP
Sbjct: 86 LAGAKRDALLLSFKEAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHIPKVRVDP 145
Query: 787 EARVIGLRLYNGLFKIIPLEKDNFE---------------LKASSIRMEELE-----IQD 826
R + +Y ++P +D L + I + EL+ I D
Sbjct: 146 SGRCAVMLIYGTQLVVLPFRRDTLAEEHEGLVGEGQKSSFLPSYIIDVRELDEKLLNIID 205
Query: 827 VQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIEMEA 876
+QFLHG PT++ + +Q GR + ISL ++ W +++ +
Sbjct: 206 MQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHPIIWSLNSLPYDC 265
Query: 877 SLVIPVPEPLGGAIIIGQESILY 899
+ + VP+P+GG +I S+LY
Sbjct: 266 TQALAVPKPVGGVVIFAVNSLLY 288
>gi|154421858|ref|XP_001583942.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
gi|121918186|gb|EAY22956.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
Length = 1297
Score = 44.7 bits (104), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 796 YNGLFKIIPLEKDNFELKA-SSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVK--- 851
Y+ +K+I KD F + + I+D+ FL G +NPT+ IH+ + V+
Sbjct: 170 YHSSWKVI---KDAFAYDVHTDFKSPLYRIRDMVFLDGYKNPTLAIIHELIPTWSVRLPL 226
Query: 852 ---THEIS-----LKEKEFTKTPWKQDNIEMEASLVIP--------VPEPLGGAIIIGQE 895
T +S LK+KE D + M S +P VP+P+GG +++ +
Sbjct: 227 QKSTVAVSIVSPPLKKKETVLISASIDKVTMWTSRALPHNSFGLVHVPDPIGGFLVLSKN 286
Query: 896 SILYHSGKSYVAVA 909
+I+Y + VA+A
Sbjct: 287 AIIYMDHTNIVALA 300
>gi|66812672|ref|XP_640515.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
gi|60468551|gb|EAL66554.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
Length = 1628
Score = 44.7 bits (104), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 19/112 (16%)
Query: 824 IQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTP-------------WKQD 870
++D FLHG PTI+ +H+ + T I++K+ T W
Sbjct: 288 VKDFCFLHGYYEPTILFLHEPI---QTWTSRIAVKKFTCQMTAISLNLLTKAGSFIWNVS 344
Query: 871 NIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQ---IIKSSTIV 919
N +++ VPEPLGGA++I + Y + S +A I +STI+
Sbjct: 345 NFPYNCEMLVSVPEPLGGALVITANIMFYVNQTSRYGLAVNEYASIDTSTII 396
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 1029 ALSLISSKFGE-----DPNTYFVLGTAVVHPEENEPKQGRIIIFH------------YDD 1071
A+ ++S KF E + V+GTA E+ + K GR+++F +
Sbjct: 1299 AMKIVSLKFTEPDGITRARPFLVIGTAFTFGEDTQCK-GRVLVFEIVSHKTQFESEELGE 1357
Query: 1072 GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLK 1131
+L + EKE KG ++ NG LL +I + + ++ + L I
Sbjct: 1358 KRLNLLYEKEQKGPVTALSSVNGLLLMTIGPKLTVNQFYTGSLVTLSFYDAQIYICSICT 1417
Query: 1132 VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176
+K ++I++GD+ +S+ LQ+K + +S+DY + S E +
Sbjct: 1418 IK-NYIVIGDMYKSVYFLQWKD-NKTLNLLSKDYQALNIFSTEFI 1460
>gi|194883064|ref|XP_001975624.1| GG22421 [Drosophila erecta]
gi|190658811|gb|EDV56024.1| GG22421 [Drosophila erecta]
Length = 1455
Score = 44.3 bits (103), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 160 VMESFTNLAPIIDMVV---VDLERQG-------------QGQLVTCSGGFKEGSLRIIRN 203
V +S N+AP+ M V+ E G + +LV +G K G+L + N
Sbjct: 486 VCDSLMNVAPVNYMCAGERVEFEEDGATLRPHAESLQDVKIELVAATGHSKNGALSVFVN 545
Query: 204 GIGIEEHACIDLPGIKGIW-----ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
I + +L G +W A S + + ++LS T VL +G E+ E E
Sbjct: 546 CINPQIITSFELDGCLDVWTVFDDATKKSSRNDQHDFMLLSQRNSTLVLQ-TGQEINEIE 604
Query: 259 MGGFTSDQQTFYCGNV-DPRTVLQVT 283
GFT +Q T + GN+ R ++QVT
Sbjct: 605 NTGFTVNQPTIFVGNLGQQRFIVQVT 630
Score = 43.9 bits (102), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 111/271 (40%), Gaps = 61/271 (22%)
Query: 690 NLVVAKNNRIEIHTVTP-------EGLRP-------------VKEIFLYGKIAVMKFFRG 729
NLVVA N ++++ + P + L P + LYG + ++
Sbjct: 29 NLVVAGANVLKVYRIAPNVEAGQRQKLNPSEMRLAPKMRLECLATYTLYGNVMSLQCVSL 88
Query: 730 PTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAII--DPE 787
+D L I + +L+ D L+ L+ + D G + + + DP+
Sbjct: 89 AGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFEEDDIRGGWTGRYFVPTVRVDPD 148
Query: 788 ARVIGLRLYNGLFKIIPLEKDN----FEL-------KASS-------------IRMEELE 823
+R + +Y ++P KDN EL KA + I + +L+
Sbjct: 149 SRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAPTAMVSRTPIMASYLIALRDLD 208
Query: 824 -----IQDVQFLHGCQNPTIICIHQDVN---GR-HVKTH-----EISLK-EKEFTKTPWK 868
+ D+QFLHG PT++ +++ V GR V++ ISL ++ W
Sbjct: 209 EKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSDTCVLVAISLNIQQRVHPIIWT 268
Query: 869 QDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
+++ + V P+ +P+GG +++ +++Y
Sbjct: 269 VNSLPFDCLQVYPIQKPIGGCLVMTVNAVIY 299
>gi|397615212|gb|EJK63291.1| hypothetical protein THAOC_16062, partial [Thalassiosira oceanica]
Length = 322
Score = 44.3 bits (103), Expect = 0.43, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 1060 KQGRIIIFHYDDG-KLQQIAEKEIK------GACYSMCEFNGKLLASINSTVRLFEWTNE 1112
K+ ++++ G +LQ + ++ G ++ F G+LL I ++RL+E
Sbjct: 24 KESHVVLYRVVSGERLQLLHRTKVDDGSSGGGPVLALVHFQGRLLVGIGKSLRLYEMGKR 83
Query: 1113 KELR-LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMT 1171
+ L+ E ++ L+ GD VGD+M+S+ ++Y ++RD + +T
Sbjct: 84 QLLKKCELRGLPTMVKT-LQAAGDRAFVGDMMQSMQFVRYDATANRLVLVARDRSARPIT 142
Query: 1172 SIEILD 1177
E+LD
Sbjct: 143 CQELLD 148
>gi|307110174|gb|EFN58410.1| hypothetical protein CHLNCDRAFT_140348 [Chlorella variabilis]
Length = 1412
Score = 44.3 bits (103), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 71/182 (39%), Gaps = 12/182 (6%)
Query: 165 TNLAPIIDMVVVDLERQ-GQGQLVTCSGGFKEGSLRIIRNGIGIEEHACID--LPGIKGI 221
+ AP+ ++D G +L+ C G G L + R G+ A LPG+ +
Sbjct: 436 ASAAPVTFCQLIDCPSGCGDKRLLMCCGTAPFGRLALGRMAAGLRPLAVGGDHLPGLVRL 495
Query: 222 WALSIGSPKNLDNTLVLS-------FVGH--TRVLTLSGAEVEETEMGGFTSDQQTFYCG 272
AL L+LS GH T VL + + + G + T
Sbjct: 496 LALQASGTAAARCYLLLSSEDPAADAAGHGWTTVLEATAGGLHAAVLPGLHLEAATLLAA 555
Query: 273 NVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEV 332
+ +LQVTP A + A S W+PP+G +IS+ + V A G +V L
Sbjct: 556 GLPGGHMLQVTPQAVRTFCLSTGALQSCWQPPSGAAISLAAACGQHVAVAYGGEVQVLYC 615
Query: 333 HG 334
G
Sbjct: 616 GG 617
>gi|290981010|ref|XP_002673224.1| CPSF A subunit [Naegleria gruberi]
gi|284086806|gb|EFC40480.1| CPSF A subunit [Naegleria gruberi]
Length = 1373
Score = 44.3 bits (103), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 1046 VLGTAVVHPEENEPKQGRIIIFHYD-------DGKLQQIAEKEIKGACYSMCEFNGKLLA 1098
+GTA V E E +GR+++F D + KL I+ +KG ++ + + ++
Sbjct: 1038 AVGTAYVQSER-ELCRGRLLLFDLDPILGRENEYKLNLISSTSVKGPITTLEQVDRYIIC 1096
Query: 1099 SINSTVR--LFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG 1156
S+ + + F+W EK + + + L +FI+ GD+ +S++ L++K
Sbjct: 1097 SVGNRIYTYYFDW-EEKRMHITSFYDTQFYTASLNTVRNFIMFGDIYKSVSFLRWKEKGH 1155
Query: 1157 SFEEISRDYNPNWMTSIEILDDELFLG 1183
+++D P + S E L + LG
Sbjct: 1156 RLILLAKDNRPLQVVSSEFLVNNDLLG 1182
Score = 42.4 bits (98), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 158 VSVMESFTNLAPIIDM---VVVDLERQG--------QGQLVTCSGGFKEGSLRIIRNGIG 206
+ + FTN+ PI + V + G Q + CSG + G L ++ +
Sbjct: 471 LKIKHVFTNIGPISHLTAAVTSSFDMSGFKSKTNDNQLSAIACSGIGRHGCLTVLNRSLQ 530
Query: 207 IEEHACIDLPG-IKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSD 265
+ + LP +K +W +S + +L L+LS T+V E T F ++
Sbjct: 531 PDIQSEATLPFLVKQVWTISQKTEHDL--YLILSLEDKTKVFESKATLAEVTSKSMFVTN 588
Query: 266 QQTFYCGNVDPRTVLQVTPSAAILISTESK 295
+ T G + +++QVT + +LI +E K
Sbjct: 589 ETTLNIGKIR-ESIVQVTRKSVMLIGSEPK 617
>gi|357611296|gb|EHJ67409.1| putative cleavage and polyadenylation specific factor 1 [Danaus
plexippus]
Length = 328
Score = 44.3 bits (103), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFHYDD-----------GKLQQIAEKEIKGACYSMCEF 1092
Y +GT + E+ + GRI+I+ D + ++I KE KG ++ +
Sbjct: 15 YIAIGTNYNYGEDITSR-GRILIYDIIDVVPEPGQPLTKNRFKEIYAKEQKGPVTALTQV 73
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
G L++++ + L++ + + + + L VK + ILV D+ +S++LL+Y+
Sbjct: 74 LGFLISAVGQKIYLWQLKDNDLVGVAFIDTQIYVHRMLAVK-NLILVADVYKSISLLRYQ 132
Query: 1153 TMEGSFEEISRDYNPNWMTSIEILDDELFLG-----AENSYNLFICQ 1194
+ +SRD + ++ + D LG +E ++ +++ Q
Sbjct: 133 HQHRTLSLVSRDLRTAQIYDMQFMIDNTSLGFLVSESEGNFAMYMHQ 179
>gi|195381337|ref|XP_002049409.1| GJ21566 [Drosophila virilis]
gi|194144206|gb|EDW60602.1| GJ21566 [Drosophila virilis]
Length = 1420
Score = 43.9 bits (102), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 25/148 (16%)
Query: 160 VMESFTNLAPIIDMVV---VDLERQGQG-------------QLVTCSGGFKEGSLRIIRN 203
V +S N+API M V+ E G +LV +G K G+L + N
Sbjct: 450 VCDSLINVAPINYMCAGERVEFEEDGSTLRPHAESLNEVKIELVAATGHSKNGALSVFVN 509
Query: 204 GIGIEEHACIDLPGIKGIWAL-------SIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEE 256
I + +L G +W + + + + ++LS T VL +G E+ E
Sbjct: 510 CINPQIITSFELDGCLDVWTVFDDATRKPTTARQEQHDFMLLSQRSSTLVLQ-TGQEINE 568
Query: 257 TEMGGFTSDQQTFYCGNV-DPRTVLQVT 283
E GFT +Q T Y GN+ R ++QVT
Sbjct: 569 IENTGFTVNQPTIYVGNLGQQRFIVQVT 596
Score = 40.0 bits (92), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
KL+++ +KE KG ++ + G L+ + + +++ + + + N + + V
Sbjct: 1137 KLKEVFKKEQKGPVSAISDVVGFLVTGLGQKIYIWQLRDGDLIGVAFIDTNIYVHQIITV 1196
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
K I + D+ +S++LL+++ + SRD+NP + IE + D LG
Sbjct: 1197 KS-LIFIADVYKSISLLRFQEEYRTLSLASRDFNPLEVFGIEFMVDNSNLG 1246
>gi|119602515|gb|EAW82109.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform
CRA_b [Homo sapiens]
Length = 377
Score = 43.9 bits (102), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVVFAVNSLLY 288
>gi|146423120|ref|XP_001487492.1| hypothetical protein PGUG_00869 [Meyerozyma guilliermondii ATCC
6260]
Length = 1130
Score = 43.9 bits (102), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R LL G ++LLL+ + D + VEL G+ ++P + +L + F SRL
Sbjct: 283 RSLLISNKGTAYVLLLQAISQRDSVAVLSLDLVEL-GKTTVPTSVHHLTGSLFFASSRLS 341
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
S + S +++V + + PI+D+ + + + + QL+TC GG G LR
Sbjct: 342 QSLFFNVRVS----APHITVQKFMPSSPPILDISLA--KTKSKLQLLTCQGGTNSGELR 394
>gi|300176206|emb|CBK23517.2| unnamed protein product [Blastocystis hominis]
Length = 154
Score = 43.9 bits (102), Expect = 0.59, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 19/118 (16%)
Query: 78 WSE----RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVV 133
W E +YLL D G L + LL + ++ + LG +S + Y+DN VV
Sbjct: 7 WDEIEPNKYLLADKEGFLHLFLLLPDHQI---------RHSELGRVSPGAQVRYIDNRVV 57
Query: 134 FVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSG 191
+ G G S L+++ ++ E + SF N P++DM V G+ L+ G
Sbjct: 58 YAGVYAGPSALLRITQNALEP------IASFPNPGPLLDMAAVQGSVPGETHLLAAGG 109
>gi|330799483|ref|XP_003287774.1| hypothetical protein DICPUDRAFT_32967 [Dictyostelium purpureum]
gi|325082229|gb|EGC35718.1| hypothetical protein DICPUDRAFT_32967 [Dictyostelium purpureum]
Length = 1453
Score = 43.9 bits (102), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 110/276 (39%), Gaps = 69/276 (25%)
Query: 689 LNLVVAKNNRIEIH----------TVTPEGLRPVK---------EIFLYGKIAVMKFFRG 729
+NLV++KNN ++++ T + ++ V+ E+ L+G I M R
Sbjct: 30 INLVLSKNNTLQVYKIKYVKNENTTTQQKQIKKVEIKPSLELLIELKLFGTIESMASVRY 89
Query: 730 PTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAI------ 783
P + KD L + + +L+ DI + EI + H +D +NG I
Sbjct: 90 PGENKDSLLLTFRDAKISVLDYNIDIMDFEIRS-LHFYENDEF----KNGRIHFKHPPIL 144
Query: 784 -IDPEARVIGLRLYNGLFKIIPLEKDNFELK-----------------ASSIRMEELEI- 824
ID + R + LY+ ++P ++ + L A+ EE +
Sbjct: 145 KIDTQQRCATMLLYDRNIVVLPFKQISSILDDEDEEEKDEEDEKENDNANQDYTEEFDDD 204
Query: 825 ---QDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKE-------------KEFTKTPWK 868
+ FL+G PTI+ +H+ T I++K + W
Sbjct: 205 DDDNNFCFLYGYYEPTILFLHE---PSQTWTSRIAVKRLTSQLTAISINFSTKLASIIWH 261
Query: 869 QDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKS 904
N+ ++ VPEPL GA++I +I++H ++
Sbjct: 262 TSNMPYNCDQLVSVPEPLSGALVIT-PNIMFHVNQT 296
>gi|158287218|ref|XP_309311.4| AGAP011340-PA [Anopheles gambiae str. PEST]
gi|157019545|gb|EAA05261.4| AGAP011340-PA [Anopheles gambiae str. PEST]
Length = 1434
Score = 43.9 bits (102), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 1059 PKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLE 1118
P+ G+ + H K +++ K+ KG ++ G L+ ++ V L++ ++ + +
Sbjct: 1140 PEPGKPLTKH----KFKEVIVKDQKGPVSAISHVCGFLVGAVGQKVYLWQMKDDDLVGVA 1195
Query: 1119 CSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD 1178
N + + +K ILV D+ +S++LL+++ + +SRDY+P + +E + D
Sbjct: 1196 FIDTNIFVHQMVSIKS-LILVADVYKSVSLLRFQEEYRTLSVVSRDYHPLNVFQVEYVVD 1254
Query: 1179 ELFLG 1183
LG
Sbjct: 1255 NANLG 1259
Score = 40.8 bits (94), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 105/272 (38%), Gaps = 66/272 (24%)
Query: 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRL 139
E+ +L G L++L L D SV+ + C+ ++ +F+GSRL
Sbjct: 341 EKLVLSLKGGELYVLTL----CADSMRSVRNFHFNKAAASVLTSCICVCEDEYLFLGSRL 396
Query: 140 GDSQLVKLNR-------SPDENG------------------------------TYV-SVM 161
G+S L++ + D++G +Y+ V
Sbjct: 397 GNSLLLRFKEKDESLVITIDDSGAVEKEPKRPRLEEEELEVYGSGYKTSVQLTSYIFEVC 456
Query: 162 ESFTNLAPIIDMVV------VDLERQGQGQLV---------TCSGGFKEGSLRIIRNGIG 206
++ N+ PI M V D E Q Q+V T SG K G+L ++++ I
Sbjct: 457 DNVLNIGPIAHMAVGERVAEEDAENQPDVQIVQNKLDIEVVTSSGHGKNGALCVLQSSIK 516
Query: 207 IEEHACIDLPGIKGIW-------ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259
+ L G +W A + ++LS G T VL +G E+ E E
Sbjct: 517 PQVITSFGLSGCVDVWTVFDEAVARRAEDGPSTHAFMILSQEGGTMVLQ-TGEEINEIEN 575
Query: 260 GGFTSDQQTFYCGNVDP-RTVLQVTPSAAILI 290
GF + T + GN+ R ++QVT + L+
Sbjct: 576 TGFATTVPTIHVGNIGTNRFIVQVTTKSIRLL 607
>gi|9794906|gb|AAF98387.1| cleavage and polyadenylation specificity factor [Drosophila
melanogaster]
Length = 279
Score = 43.5 bits (101), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 160 VMESFTNLAPIIDMVV---VDLERQG-------------QGQLVTCSGGFKEGSLRIIRN 203
V +S N+API M V+ E G + +LV +G K G+L + N
Sbjct: 92 VCDSLMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFVN 151
Query: 204 GIGIEEHACIDLPGIKGIW-----ALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETE 258
I + +L G +W A S + + ++LS T VL +G E+ E E
Sbjct: 152 CINPQIITSFELDGCLDVWTVFDDATKKSSRNDQHDFMLLSQRNSTLVLQ-TGQEINEIE 210
Query: 259 MGGFTSDQQTFYCGNV-DPRTVLQVT 283
GFT +Q T + GN+ R ++QVT
Sbjct: 211 NTGFTVNQPTIFVGNLGQQRFIVQVT 236
>gi|157110889|ref|XP_001651294.1| cleavage and polyadenylation specificity factor cpsf [Aedes aegypti]
gi|108883895|gb|EAT48120.1| AAEL000832-PA [Aedes aegypti]
Length = 1417
Score = 43.5 bits (101), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
K +++ KE KG ++ +G L+ ++ V L++ ++ + + N + + +
Sbjct: 1134 KFKEVIVKEQKGPVSAITHVSGFLVGAVGQKVYLWQLKDDDLVGVAFIDTNIFVHQLVSI 1193
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
K ILV D+ +S++LL+++ + +SRDY P + IE + D LG
Sbjct: 1194 KS-LILVADVYKSVSLLRFQEDYRTLSLVSRDYQPLNVFQIEYVVDNHNLG 1243
>gi|340054355|emb|CCC48651.1| putative damage-specific DNA binding protein [Trypanosoma vivax
Y486]
Length = 1272
Score = 43.5 bits (101), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 180/475 (37%), Gaps = 57/475 (12%)
Query: 89 GRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVK-- 146
GR ++L DG+ V K L S P L+ N V VG R V
Sbjct: 358 GRYIKVMLR-----DGSDGVNPGKTVL--SHSAPMSLSTTPNSVAVVGERCVVGSRVDST 410
Query: 147 --LNRSPDENGTYVSVMESFTNLAPIIDM-VVVDLERQGQGQLVTCSGGFKEGSLRIIRN 203
+N E G V+ N P+ DM V VD R ++ +G G L ++R+
Sbjct: 411 FWMNWRTGEGGVLVN------NCGPVFDMTVAVDGPRM---SVIASTGVGLSGGLNLLRS 461
Query: 204 GIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVL------TLSGAEVEET 257
+ + + A + G+ + + + N ++LSF G++RV T+ EV ET
Sbjct: 462 AVNVCQFAAVH--GVVNVKRVCMAG-----NVIILSFPGYSRVCHFAVGKTMEVVEVYET 514
Query: 258 EMGGFTSDQQTFYCGNVDPR-TVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNK 316
F + +T ++ LQVT S + + + P +GKS+
Sbjct: 515 P---FDTLVETLELVDISQGGAFLQVTTSGVNAVQGTMQEYIH--RPGHGKSVEHAHSCG 569
Query: 317 NQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGL 376
++ ++ + L V+ H EYEV+ L + TS + A+ L
Sbjct: 570 GMLVFSSYTSICVLAVNEPHSVITFHS--EYEVSSLAMV----STTSLLVGEWGSNAISL 623
Query: 377 WTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPAS 436
+ D++A + P +IP + G LLV L +G + LD +
Sbjct: 624 Y-DVTAEGVHPRGRFTCSATPCSVSVIP-------YHGTSRLLVGLLNGYVADVLLDDIA 675
Query: 437 GRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMC 496
G + K TL T V + F S V + P VI S++ + ++L +
Sbjct: 676 GDSSVKVAETLLTLHPV-RLFNLQSHNAVLCLGEVPLVIIVSDNGFQITGIDLYGIELCG 734
Query: 497 SLNAESYPDSLALAT--DSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTF 549
+ + P + + + FG I ++Q+L+ PL + Y F
Sbjct: 735 IIPSSCSPVRYIFHSKKEQSLIFGNITDVQRLNTNFFPLRATVTLVKYMAWWNVF 789
>gi|348679451|gb|EGZ19267.1| hypothetical protein PHYSODRAFT_492468 [Phytophthora sojae]
Length = 736
Score = 43.5 bits (101), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 21/154 (13%)
Query: 778 NGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQ----DVQFLHGC 833
N + A++D +V R N + ++P + E +R+ ELEI D+ FL G
Sbjct: 226 NTLNALLDKSVKVGSKRKRNHMSGLMPNDITGREFL---LRLRELEITGKVIDLAFLDGY 282
Query: 834 QNPTIICIHQD-----VNGRHVKTHE--------ISLKEKEFTKTPWKQDNIEMEASLVI 880
PT++ +H++ GR + I++ + K W N+ + +I
Sbjct: 283 LEPTLMVLHEENEKNSTCGRLAAGFDTYCITVISINMNTRLHPKI-WTVKNLPSDCFKLI 341
Query: 881 PVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIK 914
P PLGG +++ + LY + + +A +++
Sbjct: 342 PCRAPLGGVVVLSANAFLYFNQTQFHGLATNVLR 375
>gi|33411762|emb|CAD58786.1| cleavage and polyadenylation specificity factor 1 [Bos taurus]
Length = 880
Score = 43.5 bits (101), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWAL-------------------S 225
++V CSG K G+L +++ I + +LPG +W +
Sbjct: 318 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEQEETLKGEGTEPE 377
Query: 226 IGSPKNLDNT-----LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
G+P+ D+ L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 378 PGAPEAEDDGRRHGFLILSREDSTMILQ-TGQEIMELDASGFATQGPTVFAGNIGDNRYI 436
Query: 280 LQVTP 284
+QV+P
Sbjct: 437 VQVSP 441
>gi|406602601|emb|CCH45811.1| hypothetical protein BN7_5397 [Wickerhamomyces ciferrii]
Length = 1287
Score = 43.5 bits (101), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 107/260 (41%), Gaps = 50/260 (19%)
Query: 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPV--KEIFLYGKIAVMKFFRGPTDKKDLLFIIT 741
T T +L+V KN +++ + + + + E L GKI +K + P + D L I+T
Sbjct: 22 TSLTKKDLIVVKNTLLQVFQIDSKNDKLILNHEFKLNGKIIGIKSIKLPDSQYDQLAILT 81
Query: 742 QRYNAMILECRGDIDNLEILTKAHGN---VSDRIGKPSENGIIAIIDPEARVIGLRLYNG 798
I+ D++ ++ + + + I K +E+ + IDP + L +YN
Sbjct: 82 SLAKLSIVSFDHDLNTIQTNSLHYYESEFYTKSISKINESQLK--IDPNNQT-SLVVYND 138
Query: 799 LFKIIPL-------------------EKDNFELKASSIRM--EELE-----IQDVQFLHG 832
L +P ++ N EL +SI + +LE I D FLH
Sbjct: 139 LLAFLPFKQDDDEIIDDDHHTQSNDQQQQNIELFHNSIILPANKLESTVSNIIDCDFLHS 198
Query: 833 CQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTPWKQD-------------NIEMEASLV 879
++PT+ +H N ++S+K+ D N+ + V
Sbjct: 199 YRDPTLAILH---NKEQTWASDLSIKKDTVNFVVLSLDLLNDSSTAILLVENLPYDLWFV 255
Query: 880 IPVPEPLGGAIIIGQESILY 899
P+P+P+ G ++IG I++
Sbjct: 256 KPLPDPINGTLLIGCNEIIH 275
>gi|195122290|ref|XP_002005645.1| GI18959 [Drosophila mojavensis]
gi|193910713|gb|EDW09580.1| GI18959 [Drosophila mojavensis]
Length = 1431
Score = 43.5 bits (101), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 160 VMESFTNLAPIIDMVV---VDLERQG-------------QGQLVTCSGGFKEGSLRIIRN 203
V +S N+API M V+ E G + +LV +G K G+L + N
Sbjct: 460 VCDSLINVAPINYMCAGERVEFEEDGTTLRPHAESLTDLKIELVAATGHSKNGALSVFVN 519
Query: 204 GIGIEEHACIDLPGIKGIWAL---SIGSP----KNLDNTLVLSFVGHTRVLTLSGAEVEE 256
I + +L G +W + + P + + ++LS T VL +G E+ E
Sbjct: 520 CINPQIITSFELDGCLDVWTVFDDATRKPSTARQEQHDFMLLSQRSSTLVLQ-TGQEINE 578
Query: 257 TEMGGFTSDQQTFYCGNV-DPRTVLQVT 283
E GFT +Q T Y GN+ R ++QVT
Sbjct: 579 IENTGFTVNQPTIYVGNLGQQRFIVQVT 606
Score = 40.0 bits (92), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 1073 KLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKV 1132
KL+++ +KE KG ++ + G L+ + + +++ + + + N + + V
Sbjct: 1148 KLKEVFKKEQKGPVSAISDVVGFLVTGLGQKIYIWQLRDGDLIGVAFIDTNIYVHQIITV 1207
Query: 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG 1183
K I + D+ +S++LL+++ + SRD+NP + IE + D LG
Sbjct: 1208 KS-LIFIADVYKSISLLRFQEEYRTLSLASRDFNPLEVFGIEFMVDNSNLG 1257
>gi|291232722|ref|XP_002736302.1| PREDICTED: cleavage and polyadenylation specific factor 1-like
[Saccoglossus kowalevskii]
Length = 984
Score = 43.5 bits (101), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 1044 YFVLGTAVVHPEENEPKQGRIIIFH-----------YDDGKLQQIAEKEIKGACYSMCEF 1092
+ + T +V+ EE + GRI+IF KL+ + +KE KG ++C+
Sbjct: 700 FIAVSTTIVYGEEVTCR-GRILIFDVIEVVPEPGQPLTKNKLKLLYDKEQKGPVTTLCDI 758
Query: 1093 NGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152
G L A+I + L+ + N + + I +K +FIL D+ +S++LL++
Sbjct: 759 EGLLAAAIGQKIFLWAFRNNDLIGVAFIDTQIHIHTLCTIK-NFILAADIRKSVSLLRFS 817
Query: 1153 TMEGSFEEISRD 1164
+ S ++R+
Sbjct: 818 DEDRSLSLVTRE 829
>gi|194374339|dbj|BAG57065.1| unnamed protein product [Homo sapiens]
Length = 330
Score = 43.5 bits (101), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVVFAVNSLLY 288
>gi|256079468|ref|XP_002576009.1| sam/hd domain protein [Schistosoma mansoni]
Length = 692
Score = 43.5 bits (101), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 30/148 (20%)
Query: 108 VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDS---QLVKLNRSPDE----------- 153
V E K++ + + + L G +FV S G+ Q+ L DE
Sbjct: 2 VTEIKLKYFDTVPVASAMCVLKTGFLFVASEFGNHCLYQIAHLGDDDDEPEFSSAMPLEE 61
Query: 154 ------------NGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRII 201
N V VMES L+P++ + D + QL G + R++
Sbjct: 62 GDTFYFAPRPLKNLIEVDVMES---LSPVMSCHIADFANEDTPQLAALCGRGPGSTFRLL 118
Query: 202 RNGIGIEEHACIDLPG-IKGIWALSIGS 228
R+G+ + E A DLPG +W + S
Sbjct: 119 RHGLEVSEMAKSDLPGNPNAVWTVKRNS 146
>gi|156364999|ref|XP_001626630.1| predicted protein [Nematostella vectensis]
gi|156213514|gb|EDO34530.1| predicted protein [Nematostella vectensis]
Length = 1420
Score = 43.5 bits (101), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 39/169 (23%)
Query: 763 KAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD-------------- 808
K+H DR + IDPE R + Y ++P ++
Sbjct: 127 KSHCLAQDR-------APVVRIDPERRCAVMLAYGTHLVVLPFRQEGGIDDTAQDSIISS 179
Query: 809 --------NFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVN---GRHVKTHE--- 854
++ + I + I D+QFLHG PT++ +++ + GR ++
Sbjct: 180 SDRPPVLPSYIIDVKEIDEKTCNILDIQFLHGYYEPTLLILYEPLKTWAGRLAMRNDTCA 239
Query: 855 ---ISLK-EKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILY 899
+SL ++ W+ + + V+PVP+P+GG ++ ++LY
Sbjct: 240 LVAVSLNMSQKAHPVVWQLSCLPFDCIYVMPVPKPIGGVLVCCMNALLY 288
>gi|348555856|ref|XP_003463739.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 isoform 2 [Cavia porcellus]
Length = 1387
Score = 43.5 bits (101), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 142 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 201
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 202 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 261
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 262 FDCTQALAVPKPIGGVVIFAVNSLLY 287
Score = 41.6 bits (96), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 495 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEETPKAEGSEQE 554
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 555 PSAPEAEDDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 613
Query: 280 LQVTP 284
+QV+P
Sbjct: 614 VQVSP 618
>gi|190344974|gb|EDK36771.2| hypothetical protein PGUG_00869 [Meyerozyma guilliermondii ATCC
6260]
Length = 1130
Score = 43.5 bits (101), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLG 140
R LL G ++LLL+ + D + +V + LG+ ++P + +L + F SRL
Sbjct: 283 RSLLISNKGTAYVLLLQAISQRD-SVAVSSLDLVELGKTTVPTSVHHLTGSLFFASSRLS 341
Query: 141 DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLR 199
S + S +++V + + PI+D+ + + + + QL+TC GG G LR
Sbjct: 342 QSLFFNVRVS----APHITVQKFMPSSPPILDISLA--KTKSKLQLLTCQGGTNSGELR 394
>gi|149512998|ref|XP_001514888.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like, partial [Ornithorhynchus anatinus]
Length = 831
Score = 43.1 bits (100), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSI-------GSPK------- 230
++V CSG K G+L +++ I + +LPG +W + SPK
Sbjct: 323 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEGDSPKGEGAESE 382
Query: 231 ----------NLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T Y GN+ D R +
Sbjct: 383 PTPPEPEDDGKRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVYAGNIGDDRYI 441
Query: 280 LQVTP 284
+QV+P
Sbjct: 442 VQVSP 446
>gi|431908147|gb|ELK11750.1| Cleavage and polyadenylation specificity factor subunit 1 [Pteropus
alecto]
Length = 671
Score = 43.1 bits (100), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 146 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 205
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 206 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 265
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 266 FDCTQALAVPKPIGGVVVFAVNSLLY 291
Score = 41.6 bits (96), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 527 EIVMCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEQEETPKGEAVEPE 586
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 587 PSAPDADDDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 645
Query: 280 LQVTP 284
+QV+P
Sbjct: 646 VQVSP 650
>gi|194474008|ref|NP_001124043.1| cleavage and polyadenylation specificity factor subunit 1 [Rattus
norvegicus]
gi|149066087|gb|EDM15960.1| cleavage and polyadenylation specific factor 1, 160kDa (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 1386
Score = 43.1 bits (100), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVIFAVNSLLY 288
Score = 42.0 bits (97), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 494 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEETPKAESTEQE 553
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 554 PSAPKAEEDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 612
Query: 280 LQVTP 284
+QV+P
Sbjct: 613 VQVSP 617
>gi|148697644|gb|EDL29591.1| cleavage and polyadenylation specific factor 1, isoform CRA_c [Mus
musculus]
Length = 1388
Score = 43.1 bits (100), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVIFAVNSLLY 288
Score = 42.0 bits (97), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 496 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEETPKAESTEQE 555
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 556 PSAPKAEEDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 614
Query: 280 LQVTP 284
+QV+P
Sbjct: 615 VQVSP 619
>gi|74212803|dbj|BAE33365.1| unnamed protein product [Mus musculus]
Length = 741
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVIFAVNSLLY 288
Score = 41.2 bits (95), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 498 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEETPKAESTEQE 557
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 558 PSAPKAEEDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 616
Query: 280 LQVTP 284
+QV+P
Sbjct: 617 VQVSP 621
>gi|354491124|ref|XP_003507706.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 isoform 2 [Cricetulus griseus]
Length = 1388
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVIFAVNSLLY 288
>gi|148697642|gb|EDL29589.1| cleavage and polyadenylation specific factor 1, isoform CRA_a [Mus
musculus]
Length = 1417
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 170 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLN 229
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 230 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 289
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 290 FDCTQALAVPKPIGGVVIFAVNSLLY 315
Score = 41.6 bits (96), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 525 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEETPKAESTEQE 584
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 585 PSAPKAEEDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 643
Query: 280 LQVTP 284
+QV+P
Sbjct: 644 VQVSP 648
>gi|148697643|gb|EDL29590.1| cleavage and polyadenylation specific factor 1, isoform CRA_b [Mus
musculus]
Length = 1311
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 64 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLN 123
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 124 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 183
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG +I S+LY
Sbjct: 184 FDCTQALAVPKPIGGVVIFAVNSLLY 209
Score = 41.6 bits (96), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 185 QLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNT--------- 235
++V CSG K G+L +++ I + +LPG +W + K + T
Sbjct: 419 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEETPKAESTEQE 478
Query: 236 ---------------LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV-DPRTV 279
L+LS T +L +G E+ E + GF + T + GN+ D R +
Sbjct: 479 PSAPKAEEDGRRHGFLILSREDSTMILQ-TGQEIMELDTSGFATQGPTVFAGNIGDNRYI 537
Query: 280 LQVTP 284
+QV+P
Sbjct: 538 VQVSP 542
>gi|147864212|emb|CAN80950.1| hypothetical protein VITISV_016701 [Vitis vinifera]
Length = 262
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 159 SVMESFTNLAPIIDM-----VVVDLE-----RQGQGQLVTCSGGFKEGSLRIIRNGIGIE 208
SV +S N+ P+ D + DL+ +Q +L+ CSG K G+L I++ I E
Sbjct: 106 SVSDSLINVGPLKDFAYGLRINADLKATGIVKQSNYELMCCSGHGKNGALCILQQSIRPE 165
Query: 209 EHACIDLPGIKGIWAL 224
++LPG KGIW +
Sbjct: 166 RITEVELPGCKGIWTV 181
>gi|313232279|emb|CBY09388.1| unnamed protein product [Oikopleura dioica]
Length = 1451
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 101/255 (39%), Gaps = 45/255 (17%)
Query: 690 NLVVAKNNRIEIHTVTP---------EGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFII 740
NL VA N + ++ + + E L+G + M R +D L +
Sbjct: 45 NLAVAAGNMLSVYRIRSSVDEAGNHFDRFELCDEFELWGIVVCMTRLRLAGSVRDSLLLS 104
Query: 741 TQRYNAMILECRGDIDNLEILTKAHGNVSD--RIGKPSENGIIAIIDPEARVIGLRLYNG 798
+ +I+E D +L ++ D R + + +A +D R + +Y
Sbjct: 105 IEESKCVIVEYEPDTGSLSTISMHFFQDEDLRRGFRKLSSMALARVDGFNRCAAVLVYGS 164
Query: 799 LFKIIPLEK----------------DNFELKASSIRMEELEIQ-----DVQFLHGCQNPT 837
++P + +N A+ I ++ L ++ D QFL G +PT
Sbjct: 165 YLAVLPFRRSTERDLSGQRHQAVFYENSGFIANMIDLQSLPVKIASVLDFQFLEGYNDPT 224
Query: 838 IICIHQDV---NGRHVKTHE----ISLKEKEFTKTP---WKQDNIEME---ASLVIPVPE 884
I+ +++ + GR + + ++L +T W+ + +S + P+P+
Sbjct: 225 ILLLYEALPTWTGRVTERQDTCGMVALSINLIDETHPVIWQMAGLPFPNPYSSALFPIPK 284
Query: 885 PLGGAIIIGQESILY 899
PLGG+++ S++Y
Sbjct: 285 PLGGSLLFATNSLIY 299
>gi|281205270|gb|EFA79463.1| CPSF domain-containing protein [Polysphondylium pallidum PN500]
Length = 1395
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 136 GSRLGDSQLVKLNRSPDENGTY-VSVMESFTNLAPIIDMVV-VDLER----------QGQ 183
G L D + N ++ +Y +++ + TN+ P+ D++ V + Q
Sbjct: 488 GQSLFDDEDDIFNDKKNQLKSYRLNICDHITNIGPVSDLITGVSYDHASVSNDESFEQRS 547
Query: 184 GQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSP 229
+LV CSG K G+L I++ G+ E + +LPG++ W L P
Sbjct: 548 LELVACSGHGKNGALTILQYGVRPELNTSFELPGVRQSWTLYYDDP 593
>gi|342181720|emb|CCC91200.1| putative damage-specific DNA binding protein [Trypanosoma
congolense IL3000]
Length = 1274
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 170/458 (37%), Gaps = 51/458 (11%)
Query: 108 VKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNL 167
V P V L +IP+C+ + + V V S L ++ + S E+G VS N
Sbjct: 380 VLSPAVRLQ---TIPKCVALVGDFCV-VASHLANTLWARWRTS--ESGVLVS------NC 427
Query: 168 APIIDM-VVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGIKGIWALS 225
P+ D+ V +D R G + +G G L +R + + CI D ++ +
Sbjct: 428 GPVFDITVALDGPRTG---VFAGTGVDHNGGLSFVRAAVSVSRDVCISDFQDVRCVCVS- 483
Query: 226 IGSPKNLDNTLVLSFVGHTRVLTLSGAE---VEETEMGGFTSDQQTFYCGNVDPR-TVLQ 281
+ ++ SF G++R+ E +EE F + ++T D LQ
Sbjct: 484 -------HDIIIFSFPGYSRICRYCVGETTVLEELISSTFDTSRETLLLTYSDEHEAFLQ 536
Query: 282 VTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLA 341
VT + ++ E + + G I N+ ++ + ++ V E +A
Sbjct: 537 VTTAGVRIVKPEEGSYLFECA---GNGIEHAHANEGLIVFSNPAELNAFSVR--EAAHIA 591
Query: 342 HRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGE 401
+ +E +CL + S+ T G W + L +L K
Sbjct: 592 NLHQVHETSCLWVLSGSSFLT------------GEWGTCAVNLYALVDRAVQHKACFNCS 639
Query: 402 IIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461
P S+ + LLV L +G + +D G T + + QP ++ F S
Sbjct: 640 ATPCSMCVVARPEGNRLLVGLLNGYVVDVPVDEV-GSSTTVTETVVTMQP--VRLFNLES 696
Query: 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLAL--ATDSTFTFGT 519
V + P ++ + + + V+L V + + P L T+ FG
Sbjct: 697 HNAVLCLGEVPLILIVTETRFQLTGVDLNDVALGAVIPNPNSPLRYILFSKTERALIFGN 756
Query: 520 IDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRID 557
I +QKL+I + L R+ + S F V R D
Sbjct: 757 ISNVQKLNIDFIGLKATVTRLKFMPWSGIFVVSIRRTD 794
>gi|303285993|ref|XP_003062286.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455803|gb|EEH53105.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1469
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 824 IQDVQFLHGCQNPTIICIHQD---------VNGRHVKTHEISLKEKEFTKTP-WKQDNIE 873
++DV FLHG P ++ +H++ + ++ ISL T W++ +
Sbjct: 254 VRDVCFLHGYGEPVLLVLHEERLTWAARATLVKDTMRLSAISLNVDARKHTVIWRRSALP 313
Query: 874 MEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVA 909
+ +P PLGGAI++ Q +L+ S +S A+A
Sbjct: 314 HSCYRLTAMPAPLGGAIVLSQNFLLHESQESSAALA 349
Score = 40.4 bits (93), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 27/150 (18%)
Query: 151 PDENGTYVSVMESFTNLAPIIDMVV-----VDLERQGQGQLVTCSGGFKEGSLRIIRNGI 205
PD G +V +S ++P+ID+ V V + + +L+ G K G+L +++ GI
Sbjct: 510 PDHPGYTFTVRDSVLGISPVIDLTVGASASVSGDTIERTELIAACGHGKNGALAVLQRGI 569
Query: 206 GIE---EHACIDLPGIKGIWALSIGSPKN-----------------LDNTLVLSFVGHTR 245
E E LPG+KG W + S N LV+S T
Sbjct: 570 QPELVTEVESGTLPGLKGTWTVHHDSADNERLRGSAAAAAAQAVDPYHAYLVISLASSTM 629
Query: 246 VLTLSGAEVEE-TEMGGFTSDQQTFYCGNV 274
+L +G E++E +E +D T GN
Sbjct: 630 ILE-TGEELKEVSEHVELVTDAATLCAGNA 658
>gi|55725165|emb|CAH89449.1| hypothetical protein [Pongo abelii]
Length = 565
Score = 42.7 bits (99), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVVFAVNSLLY 288
>gi|441648592|ref|XP_004093268.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 1 [Nomascus leucogenys]
Length = 1177
Score = 42.4 bits (98), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 784 IDPEARVIGLRLYNGLFKIIPLEKDN--------------------FELKASSIRMEELE 823
+DP+ R + +Y ++P +++ + + ++ + L
Sbjct: 143 VDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 202
Query: 824 IQDVQFLHGCQNPTIICI---HQDVNGRHVKTHE------ISLK-EKEFTKTPWKQDNIE 873
I D+QFLHG PT++ + +Q GR + ISL ++ W ++
Sbjct: 203 IIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 262
Query: 874 MEASLVIPVPEPLGGAIIIGQESILY 899
+ + + VP+P+GG ++ S+LY
Sbjct: 263 FDCTQALAVPKPIGGVVVFAVNSLLY 288
>gi|147827332|emb|CAN62175.1| hypothetical protein VITISV_001516 [Vitis vinifera]
Length = 1989
Score = 42.4 bits (98), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 43/134 (32%)
Query: 134 FVGSRLGDSQLVKLNRSP---------DENGTYVS------------------------V 160
F GS+LGDS LV+ P D G S V
Sbjct: 1698 FPGSQLGDSLLVQFTAIPSSSVEKKVGDSEGDVPSTKRSRRSSSDALQDMDNGDKLPLYV 1757
Query: 161 MESFTNLAPIIDM-----VVVDLE-----RQGQGQLVTCSGGFKEGSLRIIRNGIGIEEH 210
+S N+ P+ D + DL+ +Q +L+ CSG K G+L I++ I E
Sbjct: 1758 SDSLINVGPLKDFAYGLRINTDLKATGIVKQSNYELMCCSGHGKNGALCILQQSIRPERI 1817
Query: 211 ACIDLPGIKGIWAL 224
++LPG KGIW +
Sbjct: 1818 TEVELPGCKGIWTV 1831
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,286,696,092
Number of Sequences: 23463169
Number of extensions: 834769133
Number of successful extensions: 1852903
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 451
Number of HSP's that attempted gapping in prelim test: 1844845
Number of HSP's gapped (non-prelim): 4641
length of query: 1225
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 1071
effective length of database: 8,745,867,341
effective search space: 9366823922211
effective search space used: 9366823922211
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 83 (36.6 bits)