Query psy7977
Match_columns 1225
No_of_seqs 367 out of 723
Neff 6.4
Searched_HMMs 46136
Date Fri Aug 16 23:39:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7977.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7977hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1897|consensus 100.0 3E-134 7E-139 1201.7 79.4 746 23-1223 204-968 (1096)
2 KOG1898|consensus 100.0 4E-109 1E-113 988.7 54.6 776 35-1222 237-1091(1205)
3 KOG1896|consensus 100.0 1.9E-87 4.2E-92 811.1 70.8 765 24-1222 253-1238(1366)
4 COG5161 SFT1 Pre-mRNA cleavage 100.0 5.1E-65 1.1E-69 595.2 55.7 754 28-1221 274-1191(1319)
5 PF10433 MMS1_N: Mono-function 100.0 1.2E-43 2.7E-48 432.4 36.9 307 31-356 160-503 (504)
6 KOG1897|consensus 100.0 2E-43 4.3E-48 423.9 35.3 348 685-1049 24-426 (1096)
7 PF03178 CPSF_A: CPSF A subuni 100.0 9.8E-37 2.1E-41 351.2 31.9 219 1004-1224 1-230 (321)
8 KOG1896|consensus 100.0 2.1E-30 4.6E-35 316.4 30.7 285 683-973 22-374 (1366)
9 PF10433 MMS1_N: Mono-function 99.9 1.1E-23 2.5E-28 257.2 27.4 387 735-1154 1-478 (504)
10 KOG1898|consensus 99.8 1.1E-16 2.4E-21 195.4 25.9 273 689-973 28-338 (1205)
11 COG5161 SFT1 Pre-mRNA cleavage 99.5 2.5E-14 5.4E-19 170.9 5.9 268 685-963 24-378 (1319)
12 KOG0291|consensus 97.9 0.16 3.5E-06 63.1 50.8 423 80-554 68-540 (893)
13 KOG0306|consensus 97.6 0.38 8.3E-06 59.9 36.7 169 1005-1189 434-615 (888)
14 PF10282 Lactonase: Lactonase, 96.6 2.2 4.9E-05 50.2 36.4 288 133-452 2-341 (345)
15 PF10282 Lactonase: Lactonase, 96.6 1.1 2.5E-05 52.7 27.7 226 312-553 44-310 (345)
16 PRK11028 6-phosphogluconolacto 96.3 3.2 6.9E-05 48.2 33.7 124 316-454 186-325 (330)
17 PRK11028 6-phosphogluconolacto 96.3 3.1 6.8E-05 48.3 28.9 228 311-553 41-292 (330)
18 PF03178 CPSF_A: CPSF A subuni 96.3 0.72 1.6E-05 53.7 23.5 171 1005-1194 62-263 (321)
19 cd00200 WD40 WD40 domain, foun 96.3 2.1 4.6E-05 45.9 28.9 209 318-553 65-280 (289)
20 cd00200 WD40 WD40 domain, foun 96.2 2.3 4.9E-05 45.7 30.6 257 80-386 22-289 (289)
21 KOG0318|consensus 96.0 5.7 0.00012 48.3 30.3 262 268-553 237-506 (603)
22 KOG2048|consensus 96.0 6.6 0.00014 49.0 38.8 177 285-479 79-275 (691)
23 KOG2110|consensus 95.8 2.3 5E-05 49.5 23.2 230 268-523 89-332 (391)
24 KOG0647|consensus 95.5 0.38 8.3E-06 54.4 15.7 186 346-554 27-218 (347)
25 KOG2055|consensus 95.5 0.95 2.1E-05 53.8 19.2 169 369-553 315-501 (514)
26 KOG0283|consensus 95.2 2.2 4.8E-05 54.0 22.3 208 196-433 239-481 (712)
27 TIGR02658 TTQ_MADH_Hv methylam 95.1 9.7 0.00021 45.3 29.7 235 285-553 27-318 (352)
28 PF08596 Lgl_C: Lethal giant l 95.1 0.33 7.2E-06 58.4 14.6 77 346-435 86-175 (395)
29 TIGR03300 assembly_YfgL outer 95.0 11 0.00023 44.8 32.6 125 285-431 251-377 (377)
30 KOG2321|consensus 94.7 0.91 2E-05 55.2 16.4 218 276-523 114-345 (703)
31 KOG0291|consensus 94.6 18 0.0004 45.9 39.0 414 79-553 201-699 (893)
32 KOG1036|consensus 94.6 1.2 2.6E-05 50.7 16.2 170 347-553 14-196 (323)
33 COG2706 3-carboxymuconate cycl 94.5 13 0.00028 43.5 30.5 211 324-553 63-309 (346)
34 PF14727 PHTB1_N: PTHB1 N-term 94.4 16 0.00035 44.5 30.9 275 130-429 37-356 (418)
35 COG2706 3-carboxymuconate cycl 94.4 13 0.00029 43.4 31.7 296 88-454 15-342 (346)
36 KOG0310|consensus 94.3 0.5 1.1E-05 56.4 13.2 129 284-430 175-306 (487)
37 PLN00181 protein SPA1-RELATED; 94.3 3.2 6.9E-05 54.6 22.4 175 1005-1195 598-792 (793)
38 KOG0319|consensus 94.3 3.5 7.5E-05 51.8 20.6 223 307-553 63-300 (775)
39 KOG0650|consensus 94.2 4.1 9E-05 50.1 20.5 55 368-425 411-465 (733)
40 KOG1539|consensus 94.0 25 0.00055 45.1 47.8 279 71-437 37-322 (910)
41 KOG0649|consensus 94.0 12 0.00026 41.7 21.6 237 131-433 23-274 (325)
42 KOG2110|consensus 93.8 2.1 4.6E-05 49.9 16.5 142 283-437 151-334 (391)
43 PTZ00420 coronin; Provisional 93.4 30 0.00064 43.9 28.5 111 308-433 76-197 (568)
44 PF02239 Cytochrom_D1: Cytochr 93.2 24 0.00052 42.3 26.2 135 284-431 15-156 (369)
45 KOG1407|consensus 93.0 14 0.0003 41.7 20.3 202 285-553 87-291 (313)
46 KOG0306|consensus 92.8 36 0.00078 43.4 26.3 242 161-434 314-581 (888)
47 KOG1036|consensus 92.0 28 0.0006 40.1 22.8 128 284-433 34-163 (323)
48 PRK11138 outer membrane biogen 91.5 38 0.00082 40.6 29.2 127 284-432 265-393 (394)
49 KOG1446|consensus 91.5 27 0.00059 40.3 20.9 97 1004-1113 208-306 (311)
50 KOG0296|consensus 91.4 6.7 0.00014 45.8 16.2 157 1033-1200 56-224 (399)
51 KOG1274|consensus 90.9 63 0.0014 42.2 43.7 221 305-553 55-289 (933)
52 TIGR03866 PQQ_ABC_repeats PQQ- 89.8 37 0.00079 37.7 29.4 214 316-553 42-267 (300)
53 KOG0299|consensus 89.7 39 0.00084 40.8 20.9 101 306-422 327-444 (479)
54 PTZ00421 coronin; Provisional 89.5 65 0.0014 40.2 29.9 112 308-433 77-198 (493)
55 PF14727 PHTB1_N: PTHB1 N-term 89.2 62 0.0013 39.5 32.1 207 337-555 119-360 (418)
56 KOG0296|consensus 89.2 47 0.001 39.2 20.5 64 369-440 298-361 (399)
57 KOG2114|consensus 89.1 63 0.0014 42.0 23.2 210 308-538 27-258 (933)
58 KOG0289|consensus 88.9 48 0.001 39.9 20.6 143 278-438 307-465 (506)
59 PLN00181 protein SPA1-RELATED; 88.8 94 0.002 41.1 28.2 130 285-434 555-691 (793)
60 KOG0285|consensus 88.8 6.4 0.00014 45.8 13.3 71 347-433 152-223 (460)
61 KOG1538|consensus 88.4 34 0.00074 42.9 19.6 54 300-356 6-63 (1081)
62 KOG3881|consensus 88.3 1.3 2.8E-05 51.8 7.6 112 1005-1141 226-341 (412)
63 TIGR03866 PQQ_ABC_repeats PQQ- 88.3 46 0.001 36.9 30.2 132 285-433 53-187 (300)
64 KOG0647|consensus 88.2 56 0.0012 37.8 20.5 227 298-553 19-270 (347)
65 KOG2106|consensus 88.0 75 0.0016 39.0 32.0 220 301-553 241-466 (626)
66 KOG0266|consensus 88.0 49 0.0011 40.8 21.6 220 309-553 206-441 (456)
67 KOG0294|consensus 87.9 43 0.00094 38.8 18.9 210 285-524 63-284 (362)
68 KOG2111|consensus 87.9 60 0.0013 37.7 23.4 120 306-437 181-326 (346)
69 KOG2106|consensus 87.7 11 0.00023 45.8 14.6 167 1017-1195 95-274 (626)
70 PTZ00420 coronin; Provisional 87.4 95 0.0021 39.5 25.9 74 307-394 126-203 (568)
71 PF00780 CNH: CNH domain; Int 87.0 58 0.0013 36.6 23.1 107 311-435 2-124 (275)
72 KOG0316|consensus 86.5 53 0.0011 36.8 17.9 153 254-434 101-258 (307)
73 PF00780 CNH: CNH domain; Int 86.4 62 0.0013 36.4 26.2 159 163-339 86-261 (275)
74 KOG0282|consensus 86.4 3.7 7.9E-05 49.4 10.0 187 1003-1216 278-484 (503)
75 PF14783 BBS2_Mid: Ciliary BBS 85.9 15 0.00033 36.4 12.5 79 1029-1122 2-82 (111)
76 KOG1539|consensus 85.4 65 0.0014 41.7 20.3 183 232-434 85-276 (910)
77 KOG0279|consensus 85.3 17 0.00037 41.3 13.8 132 286-433 173-313 (315)
78 KOG0305|consensus 85.0 94 0.002 38.6 21.3 206 316-553 188-406 (484)
79 KOG0318|consensus 84.9 1.1E+02 0.0024 37.9 52.5 142 1041-1195 454-601 (603)
80 PTZ00421 coronin; Provisional 84.7 1.2E+02 0.0025 38.0 29.4 113 307-433 126-245 (493)
81 KOG0278|consensus 83.8 27 0.00059 39.2 14.4 142 275-435 154-299 (334)
82 KOG1274|consensus 83.5 1.1E+02 0.0023 40.2 21.3 216 186-434 27-263 (933)
83 KOG0283|consensus 83.4 15 0.00032 46.9 13.9 131 1005-1151 432-575 (712)
84 KOG0277|consensus 83.1 87 0.0019 35.5 17.9 54 324-388 37-91 (311)
85 KOG0646|consensus 81.8 51 0.0011 39.9 16.6 107 310-433 44-153 (476)
86 KOG1273|consensus 80.6 18 0.00038 41.8 11.8 150 1033-1196 27-183 (405)
87 KOG0266|consensus 80.1 1.6E+02 0.0034 36.3 22.9 115 307-434 247-365 (456)
88 KOG2055|consensus 79.6 26 0.00056 42.3 13.2 137 414-553 224-363 (514)
89 KOG0650|consensus 78.7 1E+02 0.0022 38.7 18.0 208 323-553 420-669 (733)
90 KOG0278|consensus 78.1 52 0.0011 37.1 14.1 145 217-388 145-297 (334)
91 KOG0277|consensus 77.5 8.4 0.00018 43.2 8.0 74 1035-1111 14-92 (311)
92 PF08553 VID27: VID27 cytoplas 76.6 1.9E+02 0.0042 38.1 21.0 97 277-386 494-604 (794)
93 KOG0316|consensus 76.3 1.2E+02 0.0026 34.1 16.1 127 285-432 165-299 (307)
94 KOG0315|consensus 76.1 1.1E+02 0.0024 34.7 15.9 166 1003-1188 103-280 (311)
95 PF08450 SGL: SMP-30/Gluconola 75.5 68 0.0015 35.5 15.0 130 1061-1196 21-164 (246)
96 PF06977 SdiA-regulated: SdiA- 75.1 1.6E+02 0.0034 33.6 18.8 195 344-553 19-240 (248)
97 KOG0640|consensus 74.9 72 0.0016 37.0 14.4 217 317-553 184-415 (430)
98 KOG4378|consensus 74.1 56 0.0012 39.9 14.0 158 369-547 91-254 (673)
99 PF08596 Lgl_C: Lethal giant l 73.7 1.6E+02 0.0034 35.8 18.3 31 369-399 271-301 (395)
100 PF11768 DUF3312: Protein of u 73.4 90 0.0019 39.1 16.0 89 327-433 238-329 (545)
101 KOG0294|consensus 72.6 1.1E+02 0.0023 35.8 15.1 172 1006-1200 64-241 (362)
102 KOG0263|consensus 72.2 31 0.00067 44.0 11.9 109 268-389 529-650 (707)
103 KOG0315|consensus 71.9 54 0.0012 37.0 12.3 96 323-434 59-155 (311)
104 KOG1408|consensus 71.8 42 0.00092 42.5 12.6 231 927-1198 470-715 (1080)
105 PF02239 Cytochrom_D1: Cytochr 71.6 1.5E+02 0.0033 35.6 17.4 176 369-553 5-190 (369)
106 PF13360 PQQ_2: PQQ-like domai 71.4 1.6E+02 0.0034 32.0 22.1 170 1005-1193 3-188 (238)
107 KOG0646|consensus 69.9 1.3E+02 0.0027 36.8 15.6 102 1092-1195 187-306 (476)
108 PF12894 Apc4_WD40: Anaphase-p 68.9 13 0.00028 31.1 5.4 39 337-387 2-40 (47)
109 KOG0772|consensus 66.3 3.3E+02 0.0073 33.8 21.3 249 280-553 173-476 (641)
110 KOG0299|consensus 66.0 3.2E+02 0.0069 33.5 20.2 59 368-433 297-356 (479)
111 KOG0288|consensus 65.6 17 0.00037 43.2 7.3 91 1005-1107 363-458 (459)
112 KOG2096|consensus 65.4 2.8E+02 0.006 32.6 19.4 223 307-553 87-350 (420)
113 KOG0289|consensus 65.1 3.3E+02 0.0071 33.3 18.6 108 310-433 309-419 (506)
114 KOG2048|consensus 65.0 3.9E+02 0.0085 34.2 40.1 409 79-555 37-496 (691)
115 KOG2394|consensus 64.4 18 0.00038 44.4 7.4 101 1084-1188 291-402 (636)
116 KOG0279|consensus 63.9 2.8E+02 0.006 32.1 22.9 96 285-392 85-184 (315)
117 PHA02713 hypothetical protein; 63.5 1.7E+02 0.0036 37.3 16.3 182 1005-1199 320-534 (557)
118 PHA03098 kelch-like protein; P 63.1 1.9E+02 0.0042 36.1 16.9 183 1005-1198 311-511 (534)
119 KOG2096|consensus 62.5 43 0.00094 38.8 9.6 49 505-554 99-152 (420)
120 KOG0270|consensus 61.1 1.7E+02 0.0037 35.6 14.4 102 317-433 256-360 (463)
121 PF13360 PQQ_2: PQQ-like domai 61.0 2.4E+02 0.0053 30.4 19.9 170 1005-1197 46-231 (238)
122 KOG4378|consensus 60.8 50 0.0011 40.3 10.1 53 1060-1114 185-243 (673)
123 KOG4441|consensus 60.1 3.2E+02 0.0069 34.9 17.9 180 1005-1199 349-547 (571)
124 KOG1587|consensus 59.0 4.8E+02 0.01 33.2 20.4 79 344-434 240-324 (555)
125 KOG0282|consensus 58.9 1.8E+02 0.004 35.6 14.3 233 296-553 205-451 (503)
126 KOG3881|consensus 58.7 4E+02 0.0086 32.1 17.0 203 129-389 114-321 (412)
127 KOG0271|consensus 57.7 1.5E+02 0.0033 35.4 13.0 78 346-434 200-277 (480)
128 KOG0772|consensus 57.3 3.8E+02 0.0081 33.4 16.4 133 1061-1195 290-444 (641)
129 PRK11138 outer membrane biogen 56.9 4.1E+02 0.0089 31.8 30.4 88 284-388 303-394 (394)
130 PHA02713 hypothetical protein; 55.9 4.3E+02 0.0094 33.6 18.2 182 1006-1199 273-489 (557)
131 KOG0293|consensus 55.5 1.3E+02 0.0028 36.3 12.0 151 219-389 355-514 (519)
132 PF14779 BBS1: Ciliary BBSome 54.5 71 0.0015 36.4 9.7 78 346-430 176-255 (257)
133 KOG0271|consensus 53.7 58 0.0013 38.7 8.9 109 1084-1197 116-236 (480)
134 PF14781 BBS2_N: Ciliary BBSom 53.4 97 0.0021 32.0 9.4 72 340-421 41-114 (136)
135 KOG1524|consensus 52.9 5.6E+02 0.012 32.1 23.9 284 182-523 73-389 (737)
136 PF11768 DUF3312: Protein of u 51.0 6.2E+02 0.013 32.0 19.0 158 1003-1170 182-347 (545)
137 PF06433 Me-amine-dh_H: Methyl 50.4 3.6E+02 0.0078 32.1 14.8 87 299-398 233-331 (342)
138 KOG0268|consensus 50.0 53 0.0011 38.8 7.8 177 347-553 67-248 (433)
139 KOG0295|consensus 50.0 4.4E+02 0.0096 31.5 15.0 84 346-434 277-365 (406)
140 KOG0274|consensus 49.0 5.3E+02 0.012 32.7 17.1 171 1006-1200 312-486 (537)
141 KOG2111|consensus 48.8 5.1E+02 0.011 30.5 20.5 174 1005-1200 75-260 (346)
142 KOG1240|consensus 48.5 9.3E+02 0.02 33.4 19.5 112 309-433 1103-1225(1431)
143 KOG0319|consensus 47.5 7.7E+02 0.017 32.1 20.6 169 346-545 62-244 (775)
144 KOG0771|consensus 46.3 2.4E+02 0.0052 34.0 12.5 58 493-551 282-341 (398)
145 KOG1445|consensus 45.0 1.6E+02 0.0034 37.3 10.9 63 316-389 640-709 (1012)
146 KOG0643|consensus 43.9 1.5E+02 0.0032 34.0 9.7 134 243-393 34-183 (327)
147 PF00400 WD40: WD domain, G-be 43.8 52 0.0011 25.1 4.8 30 345-386 10-39 (39)
148 KOG1273|consensus 43.4 6.2E+02 0.013 29.9 16.2 175 368-554 34-216 (405)
149 KOG2445|consensus 43.1 59 0.0013 37.7 6.7 97 1009-1110 146-256 (361)
150 KOG0301|consensus 43.0 3.9E+02 0.0084 34.4 14.0 196 1006-1224 36-237 (745)
151 PF14779 BBS1: Ciliary BBSome 42.2 57 0.0012 37.2 6.5 70 1030-1108 18-95 (257)
152 KOG0322|consensus 41.8 4.8E+02 0.01 30.1 13.3 85 369-455 164-260 (323)
153 KOG1517|consensus 41.7 1.1E+03 0.024 32.3 18.8 138 283-433 1229-1381(1387)
154 KOG0276|consensus 41.0 9E+02 0.019 31.1 25.7 172 284-486 76-255 (794)
155 KOG0293|consensus 39.5 7.9E+02 0.017 30.0 22.0 276 217-523 223-515 (519)
156 KOG0310|consensus 39.4 5.1E+02 0.011 32.0 13.9 190 1005-1216 133-330 (487)
157 KOG1645|consensus 37.5 85 0.0018 37.6 7.0 63 371-437 208-270 (463)
158 KOG0642|consensus 35.7 6.2E+02 0.013 31.9 14.0 109 130-248 306-424 (577)
159 KOG2321|consensus 35.7 6.5E+02 0.014 31.9 14.1 109 1089-1200 141-262 (703)
160 KOG0270|consensus 35.6 1.7E+02 0.0036 35.6 9.1 93 285-389 309-405 (463)
161 PF08728 CRT10: CRT10; InterP 35.3 96 0.0021 40.3 7.6 64 1133-1196 176-246 (717)
162 KOG0295|consensus 34.1 4.2E+02 0.0092 31.7 11.8 102 278-392 239-368 (406)
163 KOG2079|consensus 33.6 8.4E+02 0.018 33.3 15.4 111 308-433 92-205 (1206)
164 KOG0280|consensus 33.4 3.5E+02 0.0075 31.6 10.7 99 274-390 140-243 (339)
165 KOG1034|consensus 33.3 1.8E+02 0.004 34.1 8.7 143 1041-1197 104-279 (385)
166 KOG1240|consensus 32.7 1.1E+03 0.025 32.6 16.4 99 323-433 1171-1273(1431)
167 KOG2919|consensus 32.5 3.2E+02 0.007 32.2 10.4 171 1006-1197 134-328 (406)
168 KOG0771|consensus 31.8 5.7E+02 0.012 31.0 12.6 175 1004-1199 165-359 (398)
169 PF14781 BBS2_N: Ciliary BBSom 31.2 6.2E+02 0.013 26.3 11.7 62 317-389 64-126 (136)
170 cd00216 PQQ_DH Dehydrogenases 31.1 1.1E+03 0.024 29.2 20.1 65 1000-1074 251-323 (488)
171 PF14761 HPS3_N: Hermansky-Pud 31.1 1.6E+02 0.0034 32.8 7.5 72 1077-1148 128-211 (215)
172 KOG3679|consensus 30.9 1E+02 0.0022 36.2 6.2 105 445-550 194-301 (802)
173 PF14783 BBS2_Mid: Ciliary BBS 30.5 5.7E+02 0.012 25.6 14.0 87 283-384 23-110 (111)
174 KOG0302|consensus 30.3 6.1E+02 0.013 30.6 12.3 130 263-413 266-407 (440)
175 KOG1408|consensus 30.1 4.9E+02 0.011 33.7 12.1 67 368-435 269-356 (1080)
176 KOG0290|consensus 30.0 7.4E+02 0.016 29.0 12.5 148 1039-1196 56-227 (364)
177 KOG1538|consensus 29.9 5.4E+02 0.012 33.1 12.2 112 309-432 135-251 (1081)
178 PHA03098 kelch-like protein; P 29.3 6E+02 0.013 31.7 13.5 153 1042-1199 295-465 (534)
179 PF12341 DUF3639: Protein of u 28.1 1.1E+02 0.0024 22.9 3.8 26 347-386 2-27 (27)
180 KOG0303|consensus 27.9 1.1E+03 0.025 28.6 13.9 122 370-511 186-319 (472)
181 PF14655 RAB3GAP2_N: Rab3 GTPa 27.2 87 0.0019 38.3 5.2 47 1014-1070 42-97 (415)
182 KOG1900|consensus 26.7 3E+02 0.0064 37.9 10.1 102 72-178 132-253 (1311)
183 TIGR02658 TTQ_MADH_Hv methylam 26.6 1.2E+03 0.026 28.0 25.3 60 369-434 57-126 (352)
184 KOG3621|consensus 26.4 5.8E+02 0.013 33.0 12.0 177 282-489 52-245 (726)
185 KOG0640|consensus 26.2 1.2E+02 0.0027 35.1 5.8 74 346-434 172-247 (430)
186 KOG0286|consensus 26.1 1.1E+03 0.024 27.6 23.7 231 280-553 43-292 (343)
187 KOG1188|consensus 25.6 3.9E+02 0.0085 31.7 9.6 134 1060-1198 48-198 (376)
188 KOG4441|consensus 25.1 1.5E+03 0.033 28.9 17.3 184 1004-1200 300-501 (571)
189 KOG3621|consensus 25.0 6.1E+02 0.013 32.8 11.8 197 308-522 37-245 (726)
190 TIGR02276 beta_rpt_yvtn 40-res 24.9 2.4E+02 0.0052 21.8 5.8 39 369-409 3-41 (42)
191 KOG0645|consensus 24.8 1.1E+03 0.025 27.3 13.0 70 307-388 62-135 (312)
192 KOG0288|consensus 24.6 9.2E+02 0.02 29.4 12.5 91 285-389 322-418 (459)
193 KOG0276|consensus 24.2 1.6E+03 0.035 28.9 33.3 60 82-150 28-87 (794)
194 PRK01742 tolB translocation pr 23.9 1.1E+03 0.023 28.7 13.9 130 1061-1197 183-323 (429)
195 KOG1517|consensus 23.6 1.8E+03 0.04 30.3 15.8 178 1004-1197 1085-1288(1387)
196 PF12234 Rav1p_C: RAVE protein 23.1 8.3E+02 0.018 31.7 12.8 112 309-431 34-155 (631)
197 KOG1587|consensus 22.4 1.7E+03 0.037 28.5 17.5 233 308-552 244-504 (555)
198 TIGR02276 beta_rpt_yvtn 40-res 22.4 2.9E+02 0.0062 21.3 5.8 29 513-543 14-42 (42)
199 PHA02790 Kelch-like protein; P 22.3 1.4E+03 0.031 28.2 14.8 150 1041-1201 271-426 (480)
200 KOG1063|consensus 21.8 7.7E+02 0.017 31.9 11.7 64 369-433 630-699 (764)
201 KOG0264|consensus 20.9 1E+03 0.022 29.2 12.0 126 346-488 272-404 (422)
202 KOG0639|consensus 20.5 7.2E+02 0.016 31.0 10.7 100 316-432 520-621 (705)
203 KOG0649|consensus 20.0 1.3E+03 0.029 26.4 11.9 142 1040-1195 20-185 (325)
204 KOG2395|consensus 20.0 1.3E+03 0.029 29.1 12.9 158 284-458 355-527 (644)
No 1
>KOG1897|consensus
Probab=100.00 E-value=3.2e-134 Score=1201.66 Aligned_cols=746 Identities=57% Similarity=0.930 Sum_probs=694.3
Q ss_pred CeEEEEE--------eecCCCCCCCceeEEeeecceEEEEEeCCcceeEEeeccCCCceeeeec------CCeEEEEEcC
Q psy7977 23 GIKGIWA--------LSIGSPKNLDNTLVLSFVGHTRVLTLSGAEWGFHLLRGFSSLGSLWNGW------SERYLLGDLA 88 (1225)
Q Consensus 23 ~~~~~~~--------l~~~~P~plGG~Lv~~~vg~n~liyvDq~~~~~~~~~~l~~~~~ifv~~------~~~~LL~~e~ 88 (1225)
=++|-|+ +.+++|.|.||+|| +|++.|+|+++..... +.|+.-.++.++.| ..+|||+|++
T Consensus 204 ~~~~~w~~~v~~~a~~li~VP~~~gGvlV---~ge~~I~Y~~~~~~~a--i~p~~~~~~t~~~~~~v~~~~~~yLl~d~~ 278 (1096)
T KOG1897|consen 204 FVKGPWSNNVDNGASMLIPVPSPIGGVLV---IGEEFIVYMSGDNFVA--IAPLTAEQSTIVCYGRVDLQGSRYLLGDED 278 (1096)
T ss_pred ccccccccccccCCceeeecCCCCceEEE---EeeeEEEEeeCCceeE--ecccccCCceEEEcccccCCccEEEEecCC
Confidence 4678883 44578999999999 9999999999965333 45554335667766 7889999999
Q ss_pred CCEEEEEEEeCcccCCceeeee--cEEEEecccCcceeEEEecCCeEEEEeecCCeEEEEEeeCCCCCCCceEEEeeeec
Q psy7977 89 GRLFMLLLEKEEKMDGTFSVKE--PKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTN 166 (1225)
Q Consensus 89 G~Ly~l~l~~d~~~~Gr~~Vs~--i~i~~~~tis~~SsL~~L~~g~LFvGS~~GDS~L~~i~~~~ddd~~~l~v~d~l~N 166 (1225)
|+||++.+.+.++ +|++ |+++|+|++|+|+||++|++|+||+||++|||+|+++..+.|. .+|..++++++|
T Consensus 279 G~Lf~l~l~~~~e-----~~s~~~lkve~lge~siassi~~L~ng~lFvGS~~gdSqLi~L~~e~d~-gsy~~ilet~~N 352 (1096)
T KOG1897|consen 279 GMLFKLLLSHTGE-----TVSGLDLKVEYLGETSIASSINYLDNGVLFVGSRFGDSQLIKLNTEPDV-GSYVVILETFVN 352 (1096)
T ss_pred CcEEEEEeecccc-----cccceEEEEEecCCcchhhhhhcccCceEEEeccCCceeeEEccccCCC-Cchhhhhhhccc
Confidence 9999999997743 5777 9999999999999999999999999999999999999998765 789999999999
Q ss_pred cccceeeEEeeccccCCccEEEEEecCCCccEEEEeecceeeEEEEeeCCCcceEeEeeeCCCCCCccEEEEEcCCceEE
Q psy7977 167 LAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRV 246 (1225)
Q Consensus 167 lgPI~D~~v~d~~~~~~~qLva~sG~g~~GsLrilR~GI~~~~~~s~eLpgv~~iWtl~~~~~~~~d~yLVlSf~~~T~V 246 (1225)
+|||+||++.|..+++|+||++|||++++||||++|+||+++++++++|||++++|++|....+++|.||++||.++|++
T Consensus 353 LgPI~Dm~Vvd~d~q~q~qivtCsGa~kdgSLRiiRngi~I~e~A~i~l~Gikg~w~lk~~v~~~~d~ylvlsf~~eTrv 432 (1096)
T KOG1897|consen 353 LGPIVDMCVVDLDRQGQGQIVTCSGAFKDGSLRIIRNGIGIDELASIDLPGIKGMWSLKSMVDENYDNYLVLSFISETRV 432 (1096)
T ss_pred ccceeeEEEEeccccCCceEEEEeCCCCCCcEEEEecccccceeeEeecCCccceeEeeccccccCCcEEEEEeccceEE
Confidence 99999999999998999999999999999999999999999999999999999999999888889999999999999999
Q ss_pred EEEcCceeeeeccCCcccccCeEEEEeeCCCeEEEEccCcEEEEecCCcceeeeecCCCCCcEEEEEecCCEEEEE-ECC
Q psy7977 247 LTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGC 325 (1225)
Q Consensus 247 l~i~ge~veEv~~sgF~~~~~TL~ag~l~~~~iVQVT~~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n~~~VlVa-sgg 325 (1225)
|.+++| +||+.++||.++++||+|+++.++.++|||+++||+++.+ .++++|.+|.+++|..|++|..||+|| .++
T Consensus 433 l~i~~e-~ee~~~~gf~~~~~Tif~S~i~g~~lvQvTs~~iRl~ss~--~~~~~W~~p~~~ti~~~~~n~sqVvvA~~~~ 509 (1096)
T KOG1897|consen 433 LNISEE-VEETEDPGFSTDEQTIFCSTINGNQLVQVTSNSIRLVSSA--GLRSEWRPPGKITIGVVSANASQVVVAGGGL 509 (1096)
T ss_pred EEEccc-eEEeccccccccCceEEEEccCCceEEEEecccEEEEcch--hhhhcccCCCceEEEEEeecceEEEEecCcc
Confidence 999555 9999999999999999999999999999999999999987 689999999999999999999999999 679
Q ss_pred eEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcc
Q psy7977 326 DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPR 405 (1225)
Q Consensus 326 ~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~ 405 (1225)
.++|++++...|.|+.+++++.+|+||+++|+++++ .++++++||+|++-.+.+..+|++..++.+.++...+||
T Consensus 510 ~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~-----~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPR 584 (1096)
T KOG1897|consen 510 ALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAP-----NKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPR 584 (1096)
T ss_pred EEEEEEeeccceeeeeeheecceeEEEecccCCCCC-----CcceEEEEEeecceEEEEEECCCcceeeeeccCCCccch
Confidence 999999998889999999999999999999997765 578999999998888888889999999888787789999
Q ss_pred cEEEEeeCC-eeEEEEEECCCcEEEEEEcCCCCccccceeeeecCccceEEEEeeCCceEEEEecCCcEEEEEcCCeeEE
Q psy7977 406 SILMTCFEG-HCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVF 484 (1225)
Q Consensus 406 SIll~~l~~-~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~~g~~~Vfa~sdrP~liyss~g~l~~ 484 (1225)
||++..+++ ..||+|+++||.|++|.+|..+|+++++|+++||++|+.|+.|+..+.++|||||||||++|++++++.|
T Consensus 585 SIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~kLv~ 664 (1096)
T KOG1897|consen 585 SILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNGKLVY 664 (1096)
T ss_pred heeeEEeeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecCCcEEE
Confidence 999999986 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccccccccccCCCCCCCCeEEEEeCCeEEEEEEcCCCCeeeEEEeCCCcccEEEEecCCCEEEEEEEeeeccccCCC
Q psy7977 485 SNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGS 564 (1225)
Q Consensus 485 ~pl~~~~v~~~s~F~se~~p~glv~vs~~~LrI~~i~~~~~l~ir~IpLg~TprrIay~p~s~~~vV~t~~~~~~~~d~~ 564 (1225)
+|++++.+.++|||++.+||+++++++++.|+|+++++++++|+|++|++++||||+|++.+.+|+|.|.|.|. .
T Consensus 665 spls~kev~~~c~f~s~a~~d~l~~~~~~~l~i~tid~iqkl~irtvpl~~~prrI~~q~~sl~~~v~s~r~e~--~--- 739 (1096)
T KOG1897|consen 665 SPLSLKEVNHMCPFNSDAYPDSLASANGGALTIGTIDEIQKLHIRTVPLGESPRRICYQESSLTFGVLSNRIES--S--- 739 (1096)
T ss_pred eccchHHhhhhcccccccCCceEEEecCCceEEEEecchhhcceeeecCCCChhheEecccceEEEEEeccccc--c---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999833210 0
Q ss_pred CCCCCCcccccccccccccccccccCCCCCccccCCCCCCcccceeecceeeeccccccccccccccchhhhhcccceee
Q psy7977 565 TPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFERNFTSSTDLNLVVAKNNRIEI 644 (1225)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (1225)
T Consensus 740 -------------------------------------------------------------------------------- 739 (1096)
T KOG1897|consen 740 -------------------------------------------------------------------------------- 739 (1096)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccCCCCCCceeeeecceeeeeeeccCCCCcccceeeeeccccccceeeccceeeeeeeCCCCCccceeEEeeeeeeee
Q psy7977 645 HTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVM 724 (1225)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ak~~~lei~~~~~~~l~~~~~~~~~g~i~~l 724 (1225)
+
T Consensus 740 -------------------------------------------~------------------------------------ 740 (1096)
T KOG1897|consen 740 -------------------------------------------A------------------------------------ 740 (1096)
T ss_pred -------------------------------------------h------------------------------------
Confidence 0
Q ss_pred eeccCCCCccceeeeeeeccceeeeeeccccchhhhhhhccCCCCcccCCCCCCCceeeeCCccceeeeEeecceeeeec
Q psy7977 725 KFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIP 804 (1225)
Q Consensus 725 ~~~r~~~s~~d~l~i~t~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~vDp~~r~~~~~~~~g~~~v~~ 804 (1225)
+
T Consensus 741 -------------------------~------------------------------------------------------ 741 (1096)
T KOG1897|consen 741 -------------------------E------------------------------------------------------ 741 (1096)
T ss_pred -------------------------h------------------------------------------------------
Confidence 0
Q ss_pred cccccccccccchhhhhhhhccccccccCCCCceEEeeeccCCcceeeeeeeeccccccCCCccccccccccccccccCC
Q psy7977 805 LEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPE 884 (1225)
Q Consensus 805 ~~~~~~~l~~~~~r~~el~~~~~~fl~~~~~p~~a~ly~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lipvp~ 884 (1225)
T Consensus 742 -------------------------------------------------------------------------------- 741 (1096)
T KOG1897|consen 742 -------------------------------------------------------------------------------- 741 (1096)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCceeEeeeeeeeeecCCccccccccccccceeEEeeeecccccceeccccchhhhhhhhhhhhcccCccccccceeee
Q psy7977 885 PLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVEL 964 (1225)
Q Consensus 885 ~~gG~~v~g~~~~~y~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ll~~~~G~l~~l~~~~~~~~~~~~~v~~~~~~~ 964 (1225)
T Consensus 742 -------------------------------------------------------------------------------- 741 (1096)
T KOG1897|consen 742 -------------------------------------------------------------------------------- 741 (1096)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCceecccccccCCCCCcccCCCCCCCCcceeeeEEEEEEECCCCcEEEEEECCCCCceEEEEEEEecCCCCeE
Q psy7977 965 LGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTY 1044 (1225)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~~~~~s~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~~~~~ 1044 (1225)
..+++.|.|+++++|++||++++.+||+++|.+.|+++|+|.++.+.|
T Consensus 742 --------------------------------~~~ee~~~s~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~ 789 (1096)
T KOG1897|consen 742 --------------------------------YYGEEYEVSFLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTY 789 (1096)
T ss_pred --------------------------------hcCCcceEEEEEEecCCceeEEeeccccccceeeeeeeeeecCCCceE
Confidence 001334679999999999999999999999999999999999988999
Q ss_pred EEEEeeeeCCCCCCCcceEEEEEEEeC-CcEEEEEEEEecCceeeeccccCeEEEEeCCEEEEEEcCCCceeeeeecccc
Q psy7977 1045 FVLGTAVVHPEENEPKQGRIIIFHYDD-GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFN 1123 (1225)
Q Consensus 1045 lvVGTa~~~~eed~~~~GrI~vf~i~~-~kL~lv~~~ev~G~v~al~~f~G~LLa~vg~~l~vy~l~~~~~L~~e~~~~~ 1123 (1225)
++|||+++.|+|++|..|||+||++.+ ++|+++|+++++|+|+||+.||||||||+|++||+|+|..+++|+.+|..+.
T Consensus 790 ~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~fngkllA~In~~vrLye~t~~~eLr~e~~~~~ 869 (1096)
T KOG1897|consen 790 YVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEFNGKLLAGINQSVRLYEWTTERELRIECNISN 869 (1096)
T ss_pred EEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhhCCeEEEecCcEEEEEEccccceehhhhcccC
Confidence 999999999999999999999999999 7999999999999999999999999999999999999999999998888777
Q ss_pred eeEEEEEEEECCEEEEeeccccEEEEEEecCCCeEEEEeccCCCceeEEEEeeeCCcEEEEcCCCcEEEEEeCCCCCCcc
Q psy7977 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDE 1203 (1225)
Q Consensus 1124 ~~i~~~l~~~g~~IlvGD~~kSv~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~dt~l~aD~~gNl~vl~~~~~~~~~~ 1203 (1225)
+.++.+|++.||+|+|||+|+|++++.|+.++++|+++|||++|+|+||+++||+|+|+|||++||+|++|+|.++++++
T Consensus 870 ~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~evArD~~p~Wmtaveil~~d~ylgae~~gNlf~v~~d~~~~td~ 949 (1096)
T KOG1897|consen 870 PIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEVARDYNPNWMTAVEILDDDTYLGAENSGNLFTVRKDSDATTDE 949 (1096)
T ss_pred CeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEeehhhCccceeeEEEecCceEEeecccccEEEEEecCCCCchh
Confidence 77799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEEEEEEeCCceee
Q psy7977 1204 DRTHLQEVGTVHLVGDGLVQ 1223 (1225)
Q Consensus 1204 ~~~rL~~~~~fhl~Ge~i~~ 1223 (1225)
++++|+..+.||+ ||.|.+
T Consensus 950 eR~~l~~~~~~hl-Gelvn~ 968 (1096)
T KOG1897|consen 950 ERQILEEVGKFHL-GELVNK 968 (1096)
T ss_pred hhhcccceeeEEe-ccceee
Confidence 9999999999999 999876
No 2
>KOG1898|consensus
Probab=100.00 E-value=4.5e-109 Score=988.68 Aligned_cols=776 Identities=24% Similarity=0.391 Sum_probs=662.9
Q ss_pred CCCCC-----ceeEEeeecceEEEEEeCCcceeE--E----eeccCC--Cce-eeeec------CCeEEEEEcCCCEEEE
Q psy7977 35 PKNLD-----NTLVLSFVGHTRVLTLSGAEWGFH--L----LRGFSS--LGS-LWNGW------SERYLLGDLAGRLFML 94 (1225)
Q Consensus 35 P~plG-----G~Lv~~~vg~n~liyvDq~~~~~~--~----~~~l~~--~~~-ifv~~------~~~~LL~~e~G~Ly~l 94 (1225)
+-|-| |++| ..+|.+.|.+...+..+ + .+.+.+ ... +-.+| .-.+|+|+++||+|++
T Consensus 237 ~VP~G~D~ps~v~v---c~~n~~~y~~~~d~p~~ri~~~rr~~~L~~~~~~vliv~s~~hk~k~~ff~llqt~~GD~fk~ 313 (1205)
T KOG1898|consen 237 TVPGGSDGPSGVLV---CAENYLLYRNLGDHPDVRIPIERRINELSDAEDGVLIVSSAEHKTKSMFFFLLQTEYGDLFKL 313 (1205)
T ss_pred EecCCCCCCcceEE---ecCceeeccccccCCCEEeccccccccCCccccccEEEEeecccccCCeEEEEEecCCceEEE
Confidence 34666 8999 99999999998753321 1 234431 122 22233 4569999999999999
Q ss_pred EEEeCcccCCceeeeecEEEEecccCcceeEEEecCCeEEEEeecCCeEEEEEeeCCCCCC-------------------
Q psy7977 95 LLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENG------------------- 155 (1225)
Q Consensus 95 ~l~~d~~~~Gr~~Vs~i~i~~~~tis~~SsL~~L~~g~LFvGS~~GDS~L~~i~~~~ddd~------------------- 155 (1225)
++++|++ .|..++++||+++|.+..|+++++|+||++|++||+.|||+..+|+|++
T Consensus 314 tl~~d~d-----~v~el~lkYfDtvp~a~~L~I~k~GfLf~~sE~~n~~lyq~~~LG~~~~~~s~~~~~~~~~~~~f~p~ 388 (1205)
T KOG1898|consen 314 TLEHDGD-----NVVELRLKYFDTVPCALQLCILKTGFLFVASEFGNHRLYQFEKLGEEDDDFSNAMTSEEGKSVFFEPR 388 (1205)
T ss_pred EEecCCC-----cceeeeeehhcCCccceEEEEeccceEEEhhhccCcceeehhhcCCCccchhhhcccccCcceecccc
Confidence 9999954 5889999999999999999999999999999999999999999885432
Q ss_pred --CceEEEeeeeccccceeeEEeeccccCCccEEEEEecCCCccEEEEeecceeeEEEEeeCCC-cceEeEeeeCCCCCC
Q psy7977 156 --TYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPG-IKGIWALSIGSPKNL 232 (1225)
Q Consensus 156 --~~l~v~d~l~NlgPI~D~~v~d~~~~~~~qLva~sG~g~~GsLrilR~GI~~~~~~s~eLpg-v~~iWtl~~~~~~~~ 232 (1225)
.++..+++++|+.|++|+.+++..+++.+||++|||+|.+++||++|+|+.++++...+||+ .+++||+|.+..+.|
T Consensus 389 ~l~nL~~~~~i~sl~p~~d~~I~~~~ne~~~qi~~~cg~~~~sslr~lR~gle~sel~~t~lp~~~ta~WTvk~~~td~y 468 (1205)
T KOG1898|consen 389 ILKNLSPVSSVESLSPLLDISIGDDSNEDTPQIYSACGRGPRSSLRILRNGLEVSELLVTELPGNPTATWTVKKNITDVY 468 (1205)
T ss_pred ccccccchhhhhccCccceeEeeccCcccchhhhhhhCcCccccchhhccccchHHHhhhccCCCCceEEEEcCcccccc
Confidence 15788999999999999999999889999999999999999999999999999999999995 589999999888999
Q ss_pred ccEEEEEcCCceEEEEEcCceeeeeccCCcccccCeEEEEeeCCCeEEEEccCcEEEEecCCcceeeeecCCCCCcEEEE
Q psy7977 233 DNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVV 312 (1225)
Q Consensus 233 d~yLVlSf~~~T~Vl~i~ge~veEv~~sgF~~~~~TL~ag~l~~~~iVQVT~~~IRli~~~~~~~i~eW~~p~g~~Iv~A 312 (1225)
|.||++||.++|+|+++ |+.+||++++||..+.+||+|+.||++.+|||++.+||++.++ +++++|++|.+.+|+.|
T Consensus 469 dsyivvsF~n~TlVLsI-gesveEvtdsgFls~~~Tl~~~l~Gd~slVQi~~d~iRhi~~~--~r~~ew~~P~~~~Iv~~ 545 (1205)
T KOG1898|consen 469 DSYIVVSFVNGTLVLSI-GESVEEVTDSGFLSTTPTLACSLMGDDSLVQIHPDGIRHIRPT--KRINEWKTPERVRIVKC 545 (1205)
T ss_pred ceEEEEEeeccEEEEEc-chhHHHhhhcccccCCceEEEEEecCCcEEEEchhhhhhcccc--cccccccCCCceEEEEE
Confidence 99999999999999999 7999999999999999999999999999999999999999998 69999999999999999
Q ss_pred EecCCEEEEE-ECCeEEEEEeecc-ceeEE-eeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCC-
Q psy7977 313 SCNKNQVLCA-TGCDVYYLEVHGS-EIKQL-AHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP- 388 (1225)
Q Consensus 313 s~n~~~VlVa-sgg~Lv~feid~~-~L~ev-~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~- 388 (1225)
++|..||+|| +|++++||+++.+ ++.|. ++++++.+++|+++.+.+.++ ++++|+++|+. |++++|++|.
T Consensus 546 avnr~qiVvalSngelvyfe~d~sgql~E~~er~tl~~~vac~ai~~~~~g~-----krsrfla~a~~-d~~vriisL~p 619 (1205)
T KOG1898|consen 546 AVNRRQIVVALSNGELVYFEGDVSGQLNEFTERVTLSTDVACLAIGQDPEGE-----KRSRFLALASV-DNMVRIISLDP 619 (1205)
T ss_pred eecceEEEEEccCCeEEEEEeccCccceeeeeeeeeceeehhhccCCCCcch-----hhcceeeeecc-ccceeEEEecC
Confidence 9999999999 9999999999865 78887 688999999999999998877 78999999998 9999999995
Q ss_pred --CcceEEeecCCCCCCcccEEEEeeC---C----eeEEEEEECCCcEEEEEEcCCCCccccceeeeecCccceEEEEee
Q psy7977 389 --SLEEVCKEPLGGEIIPRSILMTCFE---G----HCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS 459 (1225)
Q Consensus 389 --~Le~v~~~~L~~~~~P~SIll~~l~---~----~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~ 459 (1225)
.|..++.|.++ ..|+|+++++++ + ..||++|++||.|+++.+|..+|+|.+.|+|+||.+||+|+|+..
T Consensus 620 ~d~l~~ls~q~l~--~~~~s~~iv~~~~~~~~~~~~L~l~~GL~NGvllR~~id~v~G~l~d~rtR~lG~~pvkLf~~~~ 697 (1205)
T KOG1898|consen 620 SDCLQPLSVQGLS--SPPESLCIVEMEATGGTDVAQLYLLIGLRNGVLLRFVIDTVTGQLLDIRTRFLGLRPVKLFPISM 697 (1205)
T ss_pred cceEEEccccccC--CCccceEEEEecccCCccceeEEEEecccccEEEEEEecccccceeeeheeeeccccceEEEEee
Confidence 36777888994 789999999985 2 799999999999999999999999999999999999999999999
Q ss_pred CCceEEEEecCCcEEEEEcCCeeEEeecccccccccccCCCCCCCCeEEEEeCCeEEEEEEcCCC-CeeeEEEeCCCccc
Q psy7977 460 LSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQ-KLHIRTVPLGEAPR 538 (1225)
Q Consensus 460 ~g~~~Vfa~sdrP~liyss~g~l~~~pl~~~~v~~~s~F~se~~p~glv~vs~~~LrI~~i~~~~-~l~ir~IpLg~Tpr 538 (1225)
.+.+.|+++|+|||+.|+.+++++++|++++++++++||.+++||+|++++..+.++|..+++.+ .++.+..|+++|||
T Consensus 698 ~~~s~vL~lSsr~wl~y~~~~~~h~t~Isy~~l~~as~~~S~qcpeGiv~i~~n~l~i~~~~~~g~~~n~~~~~l~~tpr 777 (1205)
T KOG1898|consen 698 RGQSDVLALSSRPWLLYTYQQEFHLTPISYSTLEHASPFCSEQCPEGIVAISKNTLRIIALDKLGKVLNVDGFPLAYTPR 777 (1205)
T ss_pred cCcceeEEecCChhhhhhhcceeeeecccccchhccccccccCCCcchhhhhhhhhheeeehhhcccccccccccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999985 69999999999999
Q ss_pred EEEEecCCCEEEEEEEeeeccccCCCCCCCCCcccccccccccccccccccCCCCCccccCCCCCCcccceeecceeeec
Q psy7977 539 RIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIID 618 (1225)
Q Consensus 539 rIay~p~s~~~vV~t~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (1225)
|+++||+++.+++++ +|+.. ++ ++....++ |+
T Consensus 778 kvv~h~es~lLii~~-------td~~~------------~~--------------~~~a~~~~-----~~---------- 809 (1205)
T KOG1898|consen 778 KVVIHPESGLLIIGR-------TDHNA------------TL--------------TKDARKNQ-----ME---------- 809 (1205)
T ss_pred eEEEecCCCeEEEEE-------ecccc------------hh--------------hHHHhhhh-----hh----------
Confidence 999999999999998 33200 00 00000000 00
Q ss_pred cccccccccccccchhhhhcccceeeecccCCCCCCceeeeecceeeeeeeccCCCCcccceeeeeccccccceeeccce
Q psy7977 619 QNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRTDLNLVVAKNNR 698 (1225)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ak~~~ 698 (1225)
.. ..
T Consensus 810 -----~g-----------------------------------------------------------------------~v 813 (1205)
T KOG1898|consen 810 -----AG-----------------------------------------------------------------------GV 813 (1205)
T ss_pred -----cc-----------------------------------------------------------------------cc
Confidence 00 00
Q ss_pred eeeeeeCCCCCccceeEEeeeeeeeeeeccCCCCccceeeeeeeccceeeeeeccccchhhhhhhccCCCCcccCCCCCC
Q psy7977 699 IEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSEN 778 (1225)
Q Consensus 699 lei~~~~~~~l~~~~~~~~~g~i~~l~~~r~~~s~~d~l~i~t~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 778 (1225)
+|=++-.++ .-.++++.+.+
T Consensus 814 ~~s~~~~e~---------------------------------------------e~g~em~~~~~--------------- 833 (1205)
T KOG1898|consen 814 LESGEEKED---------------------------------------------EMGGEMEIIGR--------------- 833 (1205)
T ss_pred cccccccch---------------------------------------------hhccchhhhcc---------------
Confidence 000000000 00000000000
Q ss_pred CceeeeCCccceeeeEeecceeeeeccccccccccccchhhhhhhhccccccccCCCCceEEeeeccCCcceeeeeeeec
Q psy7977 779 GIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLK 858 (1225)
Q Consensus 779 ~~~~~vDp~~r~~~~~~~~g~~~v~~~~~~~~~l~~~~~r~~el~~~~~~fl~~~~~p~~a~ly~~~~~~~~~~~~~~l~ 858 (1225)
T Consensus 834 -------------------------------------------------------------------------------- 833 (1205)
T KOG1898|consen 834 -------------------------------------------------------------------------------- 833 (1205)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCccccccccccccccccCCCCCceeEeeeeeeeeecCCccccccccccccceeEEeeeecccccceeccccch
Q psy7977 859 EKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAG 938 (1225)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~lipvp~~~gG~~v~g~~~~~y~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ll~~~~G 938 (1225)
T Consensus 834 -------------------------------------------------------------------------------- 833 (1205)
T KOG1898|consen 834 -------------------------------------------------------------------------------- 833 (1205)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhhhhhcccCccccccceeeecccccCCCceecccccccCCCCCcccCCCCCCCCcceeeeEEEEEEECCCCcEE
Q psy7977 939 RLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEIL 1018 (1225)
Q Consensus 939 ~l~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~~~~~s~irlvdp~t~~~i 1018 (1225)
.+.+.+ ..++.+ ..|+. |.|+|+++|+.+.+++
T Consensus 834 -------------------~~~~~~-------------~v~~~p--------------~a~~~-w~s~I~~~d~~s~~~~ 866 (1205)
T KOG1898|consen 834 -------------------EEVLPE-------------NVYGSP--------------RAGNG-WVSSIRVFDPKSGKII 866 (1205)
T ss_pred -------------------cccccc-------------ccccCc--------------ccccC-ccceEEEEcCCCCceE
Confidence 000000 001111 12333 9999999999999999
Q ss_pred EEEECCCCCceEEEEEEEecCC-CCeEEEEEeeeeC-CCCCCCcceEEEEEEEeC--CcEEEEEEEEecCceeeeccccC
Q psy7977 1019 HAHQLFPGEYALSLISSKFGED-PNTYFVLGTAVVH-PEENEPKQGRIIIFHYDD--GKLQQIAEKEIKGACYSMCEFNG 1094 (1225)
Q Consensus 1019 ~~~eL~~nE~~~si~~v~~~~~-~~~~lvVGTa~~~-~eed~~~~GrI~vf~i~~--~kL~lv~~~ev~G~v~al~~f~G 1094 (1225)
+.++|.+||+++|+|.+.|.+. ..++++||+++.. .+....+.|++|+|++.+ ++|+|+|+|++.|+|.|||+|+|
T Consensus 867 ~~~~l~~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~lellh~T~~~~~v~Ai~~f~~ 946 (1205)
T KOG1898|consen 867 CLVELGQNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDKLELLHKTEIPGPVGAICPFQG 946 (1205)
T ss_pred EEEeecCCcchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCceeeeeeccCCCccceEEeccCC
Confidence 9999999999999999999864 3369999999722 222456899999999996 38999999999999999999999
Q ss_pred eEEEEeCCEEEEEEcCCCceee-eeecccceeEEEEEEEECCEEEEeeccccEEEEEEecCCCeEEEEeccCCCceeEEE
Q psy7977 1095 KLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSI 1173 (1225)
Q Consensus 1095 ~LLa~vg~~l~vy~l~~~~~L~-~e~~~~~~~i~~~l~~~g~~IlvGD~~kSv~~l~y~~~~~~L~~~arD~~~~wvta~ 1173 (1225)
++|||+|+.+|+|++|+|++|| ++++.++.+ ++.+++.+.||+|||.++||+|++|++++|+|+.||+|..|||||++
T Consensus 947 ~~LagvG~~l~~YdlG~K~lLRk~e~k~~p~~-Is~iqt~~~RI~VgD~qeSV~~~~y~~~~n~l~~fadD~~pR~Vt~~ 1025 (1205)
T KOG1898|consen 947 RVLAGVGRFLRLYDLGKKKLLRKCELKFIPNR-ISSIQTYGARIVVGDIQESVHFVRYRREDNQLIVFADDPVPRHVTAL 1025 (1205)
T ss_pred EEEEecccEEEEeeCChHHHHhhhhhccCceE-EEEEeecceEEEEeeccceEEEEEEecCCCeEEEEeCCCccceeeEE
Confidence 9999999999999999999999 999999998 59999999999999999999999999999999999999999999999
Q ss_pred EeeeCCcEEEEcCCCcEEEEEeCCCCCCccc--c----------------ceeEEEEEEEEeCCcee
Q psy7977 1174 EILDDELFLGAENSYNLFICQKDSAATSDED--R----------------THLQEVGTVHLVGDGLV 1222 (1225)
Q Consensus 1174 ~~Ld~dt~l~aD~~gNl~vl~~~~~~~~~~~--~----------------~rL~~~~~fhl~Ge~i~ 1222 (1225)
.++|++|++|||+|||++++|.|++.+++.+ . +|.+.+.+||+ ||.++
T Consensus 1026 ~~lD~~tvagaDrfGNi~~vR~P~d~~e~~~edpt~~k~~~~~g~lN~~~~K~~~i~~f~v-~Dvit 1091 (1205)
T KOG1898|consen 1026 ELLDYDTVAGADRFGNIAVVRIPPDVSEEASEDPTELKIAWEQGFLNDAPQKVQLISQFFV-GDVIT 1091 (1205)
T ss_pred EEecCCceeeccccCcEEEEECCCcchhhhccCCccccceecccccccccHhhhhhhhccc-cCeee
Confidence 9999999999999999999999999885433 1 78999999999 99875
No 3
>KOG1896|consensus
Probab=100.00 E-value=1.9e-87 Score=811.06 Aligned_cols=765 Identities=21% Similarity=0.347 Sum_probs=599.7
Q ss_pred eEEEEEeecC---------CCCCCCceeEEeeecceEEEEEeCCccee-EEeeccCC-------------------Ccee
Q psy7977 24 IKGIWALSIG---------SPKNLDNTLVLSFVGHTRVLTLSGAEWGF-HLLRGFSS-------------------LGSL 74 (1225)
Q Consensus 24 ~~~~~~l~~~---------~P~plGG~Lv~~~vg~n~liyvDq~~~~~-~~~~~l~~-------------------~~~i 74 (1225)
-.-+|++... .|.|+||+|| ++.|.++|++|++... ++.|.+.+ ....
T Consensus 253 hpVI~sv~sLP~D~~~~~~vp~piGgvLv---~~~n~~iy~nqsv~~~gv~LNs~a~~~t~fpl~~qs~v~i~ld~a~~t 329 (1366)
T KOG1896|consen 253 HPVIWSVLSLPFDCYQATAVPTPIGGVLV---FTVNNLIYLNQSVSPYGVALNSYASKYTAFPLIPQSGVRIELDCANAT 329 (1366)
T ss_pred cceEeeeccCChhhhhceeecccCccEEE---EeeeeEEEEccCCCceeEEecchhhcccCCccccccceEEEEeeccce
Confidence 3567888653 4799999999 9999999999999643 34453321 1112
Q ss_pred eeecCCeEEEEEcCCCEEEEEEEeCcccCCceeeeecEEEEecccCcceeEEEecCCeEEEEeecCCeEEEEEeeCCC--
Q psy7977 75 WNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPD-- 152 (1225)
Q Consensus 75 fv~~~~~~LL~~e~G~Ly~l~l~~d~~~~Gr~~Vs~i~i~~~~tis~~SsL~~L~~g~LFvGS~~GDS~L~~i~~~~d-- 152 (1225)
|+. .+..++...+|++|.|++..| .|| .|+.+++..+.....++|++-..+++||+||..|||.|++|+.+..
T Consensus 330 ~i~-~dk~vis~~~Gd~y~Ltl~~D---~~r-~V~~~~f~k~~asvl~t~~v~~~n~llFlGSrlgnSlll~~s~~~~~~ 404 (1366)
T KOG1896|consen 330 WIS-NDKCVISLKNGDLYLLTLILD---IGR-SVQLLHFDKFKASVLATSIVGHGNNLLFLGSRLGNSLLLRFSELLQRA 404 (1366)
T ss_pred eec-CCeEEEecCCCcEEEEEEEec---ccc-chhhhhhhhhhcccceeeeeccCCccEEEEecCCCEEEEEehhccccC
Confidence 333 677999999999999999999 255 7888888877666788999999999999999999999999987410
Q ss_pred ----------C------------C------C-------------------------CceEEEeeeeccccceeeEEeecc
Q psy7977 153 ----------E------------N------G-------------------------TYVSVMESFTNLAPIIDMVVVDLE 179 (1225)
Q Consensus 153 ----------d------------d------~-------------------------~~l~v~d~l~NlgPI~D~~v~d~~ 179 (1225)
+ + + -.|+++|+|+|+|||.||++++..
T Consensus 405 ~e~~~re~~d~~~~~~~~~~~d~~~d~~~~d~~~~~~~~~g~~~~~g~~a~~t~~~f~fevcDsL~NIGPi~~~avG~~~ 484 (1366)
T KOG1896|consen 405 SEGVRREEGDTESDGYSKKRVDDTQDVRRDDEKSAELFEAGSEENYGSGAQETVQPFSFEVCDSLPNIGPITDFAVGKRS 484 (1366)
T ss_pred CccccccccCCcCCcchhhcccchhhhhhhhhhccchhhccccccCCcccceeeeeeEEeehhccccccccccceecccc
Confidence 0 0 0 037899999999999999999753
Q ss_pred c----------cCC-ccEEEEEecCCCccEEEEeecceeeEEEEeeCCCcceEeEeeeCC-----CCCCccEEEEEcCCc
Q psy7977 180 R----------QGQ-GQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGS-----PKNLDNTLVLSFVGH 243 (1225)
Q Consensus 180 ~----------~~~-~qLva~sG~g~~GsLrilR~GI~~~~~~s~eLpgv~~iWtl~~~~-----~~~~d~yLVlSf~~~ 243 (1225)
+ .+. .++|+|+|.|++|.|.++|+.|.|+....++|||+.++|++..+. .+..|.|+++|..++
T Consensus 485 ~~~~~~~gl~~~~~~~elV~~sGhgkngaL~V~r~sI~P~i~t~fel~Gc~~iWtV~~~~~~~~~~~~~h~~lilS~e~~ 564 (1366)
T KOG1896|consen 485 SASEAVEGLSPHNKCLELVATSGHGKNGALSVIRRSIRPEIATEFELPGCVDIWTVFIKGRKREEDNTQHLYLILSTESR 564 (1366)
T ss_pred chhhhccCCCCCCCeEEEEEeccCCCCcceEEEeecccceeeEEEEecCeeeEEEEEEeccccccccCcceEEEeecccc
Confidence 2 223 689999999999999999999999999999999999999998632 234589999999999
Q ss_pred eEEEEEcCceeeeeccCCcccccCeEEEEeeCCC-eEEEEccCcEEEEecCCcceeeeecCCCCCcEEEEEecCCEEEEE
Q psy7977 244 TRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPR-TVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA 322 (1225)
Q Consensus 244 T~Vl~i~ge~veEv~~sgF~~~~~TL~ag~l~~~-~iVQVT~~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n~~~VlVa 322 (1225)
|.||.- |+++.|++.++|..+++||++|+++++ ++|||||+++|+++.+. ..++....+.+..++++++.|+||++.
T Consensus 565 t~il~t-ge~~~Ev~~s~f~~~~~Tl~~gnlg~~rriVQVtp~~~rllDg~~-r~lq~i~fd~~~~vv~~sv~dpyv~v~ 642 (1366)
T KOG1896|consen 565 TMILET-GEELLEVSGSGFTRDGPTLFAGNLGNERRIVQVTPSGLRLLDGDL-RMLQRIPFDSGAIVVQTSVADPYVAVR 642 (1366)
T ss_pred hhhhhc-cchhhhcccceeEeccceEEEEecCCceEEEEEccceeEEecCcc-hheeEeccccCCcEEEEeccCceEEEE
Confidence 999995 999999999999999999999999876 99999999999999976 577777777788899999999999997
Q ss_pred -ECCeEEEEEeeccceeEEeeeccCceeEEEEeccC-----------------CCCCCC--------------Cc----c
Q psy7977 323 -TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPL-----------------SNEETS--------------SE----P 366 (1225)
Q Consensus 323 -sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~-----------------~~~~~~--------------~~----~ 366 (1225)
++|.+..|+++.......-...+...+.++++.+. .+++.. .+ .
T Consensus 643 ~~~g~i~~~~l~~~s~rl~~~~~~s~~~~sv~~~~dlsg~f~~~s~l~~k~~~~~gr~~~~~~~~~~~~kv~~~egg~~~ 722 (1366)
T KOG1896|consen 643 SSEGRITLYDLEEKSHRLALHDPMSFKVVSVSLPADLSGMFTTLSDLSLKGNEANGRSSEAEGLQSLPCKVDDEEGGSPE 722 (1366)
T ss_pred EcCCceEEEEeccccchhhccCcccceeEEEechhhhccceEEEeeecccCcccccccccccccccCCccccCCCCCCcc
Confidence 88999999887542111111112221211111110 000000 00 0
Q ss_pred ccCcEEEEEEecCCeEEEEeCCCcceEEee-cC--CC--------------CCCcc----cEEEEeeC-----CeeEEEE
Q psy7977 367 AKAQLAAVGLWTDISARLLSLPSLEEVCKE-PL--GG--------------EIIPR----SILMTCFE-----GHCYLLV 420 (1225)
Q Consensus 367 ~~s~~laVG~w~d~tv~IlsL~~Le~v~~~-~L--~~--------------~~~P~----SIll~~l~-----~~~~LlV 420 (1225)
+...|+.+. ..+|++.||++|++..++.- .. +. ...+. .+.+++++ .+++|++
T Consensus 723 ~~~~~~~~~-~e~g~leiy~~pd~~lVf~v~~f~~~~~~L~~~~~~~~~~~~~s~~~~l~q~~~~~L~~e~~~~e~~L~l 801 (1366)
T KOG1896|consen 723 QEPYWCVFV-TESGTLEIYALPDFDLVFEVDMFDTGNRVLMDSRLRGPTTNKESEDLELKQLFVNPLGSEIVFKEPHLFL 801 (1366)
T ss_pred cCceEEEEE-cCCCceEEEccCCcceEEEeeccCCCcceEEeecccCccccccccchHHHHhhccccchhhhccCCceEE
Confidence 111345554 45999999999987766531 11 10 00111 12333333 4799999
Q ss_pred EECCCcEEEEEEcCC--CCc--cccce-----------e-----ee----------ecCccceEEEE-eeCCceEEEEec
Q psy7977 421 ALGDGSMFYFSLDPA--SGR--LTDKK-----------K-----VT----------LGTQPTVLKTF-RSLSTTNVFACS 469 (1225)
Q Consensus 421 Gl~nG~L~~y~ld~~--sg~--Ls~~k-----------~-----~~----------LG~~pV~L~~~-~~~g~~~Vfa~s 469 (1225)
-+.+|.++.|+.=+. .|. +..++ . +- -+..-.++++| .++|.++||+||
T Consensus 802 v~~~~eil~Ykaf~~~~~~~~~~~f~kvp~~~~~~~~~p~~~~~~~~~~~~e~~~~~~~~~~~m~~f~~i~ghsgvfv~G 881 (1366)
T KOG1896|consen 802 VVSDNEILIYKAFPQLSQGNLKVFFKKVPHNLNIRTDKPHFLCKKREGGGAEEGASVSVIVQRMTYFEDIGGHSGVFVTG 881 (1366)
T ss_pred EEeCceEEEEeeccccCccchhhhhhhCCHhhcccccCCcccchhhccccccccccccceeeeEEeeccccCeeEEEEec
Confidence 999999999985441 221 11111 0 00 11222357788 468999999999
Q ss_pred CCc-EEEEEcCCeeEEeecccc-cccccccCCCCCCCCeEEEEeC-CeEEEEEEcCC----CCeeeEEEeCCCcccEEEE
Q psy7977 470 DRP-TVIYSSNHKLVFSNVNLR-QVNHMCSLNAESYPDSLALATD-STFTFGTIDEI----QKLHIRTVPLGEAPRRIAY 542 (1225)
Q Consensus 470 drP-~liyss~g~l~~~pl~~~-~v~~~s~F~se~~p~glv~vs~-~~LrI~~i~~~----~~l~ir~IpLg~TprrIay 542 (1225)
++| |++.+-++.+++.|+..+ ++.+++||+.-.||.|++|++. +.++||.++.. .+|++|+|||+.|||.++|
T Consensus 882 s~P~~il~t~rg~lr~h~~~gngpv~sfapfhnvn~p~gfiyvd~~~~l~i~~lp~~~~Ydn~wPvkkIpl~~T~~~vvY 961 (1366)
T KOG1896|consen 882 SKPYLILLTFRGVLRFHPVFGNGPVGSFAPFHNVNCPRGFIYVDRQGELVICVLPEALSYDNKWPVKKIPLRKTPHQVVY 961 (1366)
T ss_pred CCceEEEEEcccccceeeeecCCcceeeeeeeccCCCcceEEECCCceEEEEEcchhcccCCCCcccccccccchhheee
Confidence 999 555667888888887654 7899999999999999999976 79999999986 5899999999999999999
Q ss_pred ecCCCEEEEEEEeeeccccCCCCCCCCCcccccccccccccccccccCCCCCccccCCCCCCcccceeecceeeeccccc
Q psy7977 543 QESSQTFGVITTRIDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTF 622 (1225)
Q Consensus 543 ~p~s~~~vV~t~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (1225)
|++.+.|+|+++.+ ++|.
T Consensus 962 h~e~~vy~v~t~~~----------------------------------------------~~~~---------------- 979 (1366)
T KOG1896|consen 962 HYEKKVYAVITSTP----------------------------------------------VPYE---------------- 979 (1366)
T ss_pred eccceEEEEEEecc----------------------------------------------ceee----------------
Confidence 99999999998322 1111
Q ss_pred cccccccccchhhhhcccceeeecccCCCCCCceeeeecceeeeeeeccCCCCcccceeeeeccccccceeeccceeeee
Q psy7977 623 ERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRTDLNLVVAKNNRIEIH 702 (1225)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ak~~~lei~ 702 (1225)
T Consensus 980 -------------------------------------------------------------------------------- 979 (1366)
T KOG1896|consen 980 -------------------------------------------------------------------------------- 979 (1366)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeCCCCCccceeEEeeeeeeeeeeccCCCCccceeeeeeeccceeeeeeccccchhhhhhhccCCCCcccCCCCCCCcee
Q psy7977 703 TVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGIIA 782 (1225)
Q Consensus 703 ~~~~~~l~~~~~~~~~g~i~~l~~~r~~~s~~d~l~i~t~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~ 782 (1225)
+..+|| +.. +...
T Consensus 980 ~~~~d~---------------------------------------------~e~---~~~~------------------- 992 (1366)
T KOG1896|consen 980 RLGEDG---------------------------------------------EEE---VISR------------------- 992 (1366)
T ss_pred eccccc---------------------------------------------ccc---cccc-------------------
Confidence 001111 000 0000
Q ss_pred eeCCccceeeeEeecceeeeeccccccccccccchhhhhhhhccccccccCCCCceEEeeeccCCcceeeeeeeeccccc
Q psy7977 783 IIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLKEKEF 862 (1225)
Q Consensus 783 ~vDp~~r~~~~~~~~g~~~v~~~~~~~~~l~~~~~r~~el~~~~~~fl~~~~~p~~a~ly~~~~~~~~~~~~~~l~~~~~ 862 (1225)
T Consensus 993 -------------------------------------------------------------------------------- 992 (1366)
T KOG1896|consen 993 -------------------------------------------------------------------------------- 992 (1366)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCccccccccccccccccCCCCCceeEeeeeeeeeecCCccccccccccccceeEEeeeecccccceeccccchhhhh
Q psy7977 863 TKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAKVDANGERYLLGDLAGRLFM 942 (1225)
Q Consensus 863 ~~~~~~~~~~~~~~~~lipvp~~~gG~~v~g~~~~~y~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ll~~~~G~l~~ 942 (1225)
+++
T Consensus 993 -----------------------------------------------------------------de~------------ 995 (1366)
T KOG1896|consen 993 -----------------------------------------------------------------DEN------------ 995 (1366)
T ss_pred -----------------------------------------------------------------ccc------------
Confidence 000
Q ss_pred hhhhhhhcccCccccccceeeecccccCCCceecccccccCCCCCcccCCCCCCCCcceeeeEEEEEEECCCCcEEEEEE
Q psy7977 943 LLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVEVHNLLIIDQNTFEILHAHQ 1022 (1225)
Q Consensus 943 l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~~~~~s~irlvdp~t~~~i~~~e 1022 (1225)
...|+.++++|+|++|.+|++++.|+
T Consensus 996 ------------------------------------------------------~~~p~~~~f~i~LisP~sw~vi~~ie 1021 (1366)
T KOG1896|consen 996 ------------------------------------------------------VIHPEGEQFSIQLISPESWEVIDKIE 1021 (1366)
T ss_pred ------------------------------------------------------ccccccccceeEEecCCccccccccc
Confidence 11356678999999999999999999
Q ss_pred CCCCCceEEEEEEEecC-----CCCeEEEEEeeeeCCCCCCCcceEEEEEEEeC-----------CcEEEEEEEEecCce
Q psy7977 1023 LFPGEYALSLISSKFGE-----DPNTYFVLGTAVVHPEENEPKQGRIIIFHYDD-----------GKLQQIAEKEIKGAC 1086 (1225)
Q Consensus 1023 L~~nE~~~si~~v~~~~-----~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~-----------~kL~lv~~~ev~G~v 1086 (1225)
|++||++++|+.+.+.. .+++|++|||+++.+| |.|+|||+++|++++ .|||.++++|+||+|
T Consensus 1022 fq~~E~v~~~k~v~L~~~~t~~~~k~ylavGT~~~~gE-Dv~~RGr~hi~diIeVVPepgkP~t~~KlKel~~eE~KGtV 1100 (1366)
T KOG1896|consen 1022 FQENEHVLHMKYVILDDEETTKGKKPYLAVGTAFIQGE-DVPARGRIHIFDIIEVVPEPGKPFTKNKLKELYIEEQKGTV 1100 (1366)
T ss_pred cCccceeeEEEEEEEEecccccCCcceEEEEEeecccc-cccCcccEEEEEEEEecCCCCCCcccceeeeeehhhcccce
Confidence 99999999999999964 3679999999999998 899999999999995 389999999999999
Q ss_pred eeeccccCeEEEEeCCEEEEEEcCCCceee-eeecccceeEEEEEEEECCEEEEeeccccEEEEEEecCCCeEEEEeccC
Q psy7977 1087 YSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDY 1165 (1225)
Q Consensus 1087 ~al~~f~G~LLa~vg~~l~vy~l~~~~~L~-~e~~~~~~~i~~~l~~~g~~IlvGD~~kSv~~l~y~~~~~~L~~~arD~ 1165 (1225)
.|+|+.+|+|+.|+||||+||+|.++..|. +++-+.+-+ ++++++.||+|++||+|||++|++|++++++|..++||.
T Consensus 1101 savceV~G~l~~~~GqKI~v~~l~r~~~ligVaFiD~~~y-v~s~~~vknlIl~gDV~ksisfl~fqeep~rlsL~srd~ 1179 (1366)
T KOG1896|consen 1101 SAVCEVRGHLLSSQGQKIIVRKLDRDSELIGVAFIDLPLY-VHSMKVVKNLILAGDVMKSISFLGFQEEPYRLSLLSRDF 1179 (1366)
T ss_pred EEEEEeccEEEEccCcEEEEEEeccCCcceeeEEecccee-EEehhhhhhheehhhhhhceEEEEEccCceEEEEeecCC
Confidence 999999999999999999999997777666 666565555 688889999999999999999999999999999999999
Q ss_pred CCceeEEEEeeeCC---cEEEEcCCCcEEEEEeCCCCCCccccceeEEEEEEEEeCCcee
Q psy7977 1166 NPNWMTSIEILDDE---LFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGLV 1222 (1225)
Q Consensus 1166 ~~~wvta~~~Ld~d---t~l~aD~~gNl~vl~~~~~~~~~~~~~rL~~~~~fhl~Ge~i~ 1222 (1225)
.++.|+++|||.++ .++++|.++||+|+.|.|+++++.+|+||.++++||+ |.++.
T Consensus 1180 ~~l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y~Pe~~eS~~G~RLv~radfhv-g~~vs 1238 (1366)
T KOG1896|consen 1180 EPLNVYSTEFLVDGSNLSFLVSDADRNIHVYMYAPENIESLSGQRLVRRADFHV-GAHVS 1238 (1366)
T ss_pred chhhceeeeeEEcCCeeEEEEEcCCCcEEEEEeCCCCccccCcceeeeeeeeEe-cccee
Confidence 99999999999887 6999999999999999999999999999999999999 98874
No 4
>COG5161 SFT1 Pre-mRNA cleavage and polyadenylation specificity factor [RNA processing and modification]
Probab=100.00 E-value=5.1e-65 Score=595.17 Aligned_cols=754 Identities=16% Similarity=0.212 Sum_probs=563.7
Q ss_pred EEeecCCCCCCCceeEEeeecceEEEEEeCCcceeE-EeeccC----------C------------Cceeeeec----CC
Q psy7977 28 WALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEWGFH-LLRGFS----------S------------LGSLWNGW----SE 80 (1225)
Q Consensus 28 ~~l~~~~P~plGG~Lv~~~vg~n~liyvDq~~~~~~-~~~~l~----------~------------~~~ifv~~----~~ 80 (1225)
|.+...+|-|. |+|+ +|.|+++|+|..|.... ++|.+. + .-.+|... ..
T Consensus 274 ~d~~~~v~~p~-Gall---~g~neli~idstg~~~~I~lNs~~~k~~~~~~v~d~s~~d~n~~~~gttsIwipsSK~~~e 349 (1319)
T COG5161 274 RDFRVTVAGPV-GALL---FGSNELILIDSTGSSYTIPLNSMSEKYGGNKIVEDISLSDVNCFSRGTTSIWIPSSKCLIE 349 (1319)
T ss_pred ceEEEEEeccc-ceEE---EecccEEEEecCCcEEEeechhhHHHhcCCceEeecccceeeEeecCceeeeccCcccccc
Confidence 44444455566 8889 99999999999996542 444221 1 11245432 34
Q ss_pred eEEEEEcCCCEEEEEEEeCcccCCceeeeecEEEEec-------ccCcceeEEEecCCeEEEEeecCCeEEEEEeeCCC-
Q psy7977 81 RYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLG-------EISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPD- 152 (1225)
Q Consensus 81 ~~LL~~e~G~Ly~l~l~~d~~~~Gr~~Vs~i~i~~~~-------tis~~SsL~~L~~g~LFvGS~~GDS~L~~i~~~~d- 152 (1225)
.+++.+-.|+.|.+.+.+| |+ .+.++.+..++ .-|.++|+..+++..+|.|+-.+||.+++|.++..
T Consensus 350 tl~l~dl~g~~yyl~~~~d----gk-~iigfdi~~L~~e~dllk~~s~~~Cv~~~n~~l~f~g~g~~ns~vlr~~~l~~t 424 (1319)
T COG5161 350 TLFLGDLNGDRYYLRISMD----GK-RIIGFDIASLEFEGDLLKKGSAVSCVGHVNNLLFFGGVGDSNSRVLRIKSLLPT 424 (1319)
T ss_pred eEEEEecCCCEEEEEEEec----cc-eeeccceeeeeeeccccccCCCCeeEEEcCceEEEEEecCCceEEEEecccCCc
Confidence 5799999999999999998 65 68787666553 35789999999999999999999999999988410
Q ss_pred ----------------C---CC----------------------Cc-eEEEeeeeccccceeeEEeecc--------ccC
Q psy7977 153 ----------------E---NG----------------------TY-VSVMESFTNLAPIIDMVVVDLE--------RQG 182 (1225)
Q Consensus 153 ----------------d---d~----------------------~~-l~v~d~l~NlgPI~D~~v~d~~--------~~~ 182 (1225)
| || ++ +++++.+.|.|||.||++++.+ +.+
T Consensus 425 iEtR~~eG~~~l~g~nDeEmdD~y~apEn~l~~n~~~~v~~~~~p~d~el~~~l~n~gpitdfavgkv~v~kglP~pN~g 504 (1319)
T COG5161 425 IETRASEGVGPLEGGNDEEMDDEYSAPENKLFGNKEQEVRRQDEPYDAELFNALSNAGPITDFAVGKVDVEKGLPIPNIG 504 (1319)
T ss_pred hhhhhhcCCCcccCCChhhhhhhhcccccccccCcccceeeccCcchhHHhhhhccCCcccceeeeeccceecCCCCCcc
Confidence 0 00 12 6889999999999999999865 346
Q ss_pred CccEEEEEecCCCccEEEEeecceeeEEEEeeCCCcceEeEeeeCCC---CCCccEEEEEcCCceEEEEEcCceeeeecc
Q psy7977 183 QGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSP---KNLDNTLVLSFVGHTRVLTLSGAEVEETEM 259 (1225)
Q Consensus 183 ~~qLva~sG~g~~GsLrilR~GI~~~~~~s~eLpgv~~iWtl~~~~~---~~~d~yLVlSf~~~T~Vl~i~ge~veEv~~ 259 (1225)
...+|+.+|++..|+|.++|..+.|.+...+.+-++..+|+++.+.- ...-.|+++|...+|++|.- ++++.+...
T Consensus 505 ~l~lV~t~G~ds~~~l~V~~ts~~P~I~~~~~fi~~e~vw~~kI~g~lr~~~~~~~~~ls~~s~S~If~~-~e~f~l~~~ 583 (1319)
T COG5161 505 LLNLVVTKGSDSEAALAVEGTSLEPCICTVSSFIPLEIVWSQKIRGYLRCSRALDFYILSRVSDSRIFRW-SEEFLLEVS 583 (1319)
T ss_pred ceeeEEeccCCCcceEEEEeccccceeeehccccchhheeehhccceehhcceeeEEEeecccccceeec-cccceeeec
Confidence 78999999999999999999999999999999999999999997642 22356899999999999996 788888888
Q ss_pred CCcccccCeEEEEeeCC-CeEEEEccCcEEEEecCCcceeeeecCCCCCcEEEEEecCCEEEEE-ECCeEEEEEeeccc-
Q psy7977 260 GGFTSDQQTFYCGNVDP-RTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSE- 336 (1225)
Q Consensus 260 sgF~~~~~TL~ag~l~~-~~iVQVT~~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n~~~VlVa-sgg~Lv~feid~~~- 336 (1225)
..|..+..|+.++.++. .++|||||+..+++|.+. +.+....... +.|++.+++||++++. ++|.+..|+++..+
T Consensus 584 g~~~rd~~Tl~~~~fgee~rvVQvtp~~l~~yD~~l-R~l~~~~F~~-~~V~~~Sv~Dp~ilvv~~~g~i~~f~~~ekn~ 661 (1319)
T COG5161 584 GEYTRDVNTLLFVEFGEENRVVQVTPSYLLRYDQDL-RMLGRVEFAS-RAVEARSVRDPLILVVRDSGKILTFYDREKNM 661 (1319)
T ss_pred ceeeccccEEEeeeccCcceEEEecchHhhhhcccc-eeeeeEeece-eeeEEEeccCCEEEEEEecCceEEEEehhhhc
Confidence 89999999999999985 599999999999999886 4455554433 3589999999999998 88889899877432
Q ss_pred -eeEEeeec-cCc-eeEEEEeccCC-CCC---CCCccccCcEEEEEEecCCeE---------EEEeCCCcceEE------
Q psy7977 337 -IKQLAHRA-LEY-EVACLDISPLS-NEE---TSSEPAKAQLAAVGLWTDISA---------RLLSLPSLEEVC------ 394 (1225)
Q Consensus 337 -L~ev~~~~-l~~-eIScLai~~~~-~~~---~~~~~~~s~~laVG~w~d~tv---------~IlsL~~Le~v~------ 394 (1225)
|..+...+ +.. ...++-+.... -+. ..+.++..+.+..++..+..+ ++..++.+.++.
T Consensus 662 rL~k~dl~~~l~d~k~~s~v~~dsN~~g~f~ig~~~Sq~e~~l~~~~~~~~q~~~~~s~~~D~~~e~dg~dQlte~~~~~ 741 (1319)
T COG5161 662 RLFKIDLVTCLADAKNKSFVLSDSNSLGIFDIGKRISQLEPCLVKGLPYAIQFSPEASPAMDLAGEEDGDDQLTEISMSL 741 (1319)
T ss_pred hhccCChHHHHHhhhhheEeccCcccccceecccchhhhchhhhhcCcccceeccccCcchhhccccccchhhhhHHHHH
Confidence 11111100 111 11111111100 000 000001122222232211111 111111011100
Q ss_pred eecCCCC--CCc--ccEEEEeeC---CeeEEEEEECCCcEEEEEEcCCCCc---ccccee--eeec---------Ccc--
Q psy7977 395 KEPLGGE--IIP--RSILMTCFE---GHCYLLVALGDGSMFYFSLDPASGR---LTDKKK--VTLG---------TQP-- 451 (1225)
Q Consensus 395 ~~~L~~~--~~P--~SIll~~l~---~~~~LlVGl~nG~L~~y~ld~~sg~---Ls~~k~--~~LG---------~~p-- 451 (1225)
+..|... ..| -.++++.+| ..+||++....|+++.|+--+.... +.-+|. ...| ...
T Consensus 742 tynl~d~~f~lpsi~~~mVa~lg~D~keeyLf~~s~~~EI~~yk~~l~r~~~f~~nvTRndlAitGaPdna~~Ka~sSV~ 821 (1319)
T COG5161 742 TYNLIDMLFRLPSIGNYMVAYLGLDLKEEYLFDNSLSSEIVFYKTHLPRHVSFNLNVTRNDLAITGAPDNADIKAFSSVG 821 (1319)
T ss_pred HHhhhhhhccChhhhhhhhHhhcccccchheehhhcCceEEEEeecccccchhhhhcchhhhhccCCCcchhhhhccccc
Confidence 0111101 123 245666666 4799999999999999985432110 100000 0011 111
Q ss_pred -ceEEEEeeCCceEEEEecCCcEEEEE-cCCeeEEeecccccccccccCCCCCCCCeEEEEeC-CeEEEEEEcCC-----
Q psy7977 452 -TVLKTFRSLSTTNVFACSDRPTVIYS-SNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATD-STFTFGTIDEI----- 523 (1225)
Q Consensus 452 -V~L~~~~~~g~~~Vfa~sdrP~liys-s~g~l~~~pl~~~~v~~~s~F~se~~p~glv~vs~-~~LrI~~i~~~----- 523 (1225)
+++...+..|.+.+|++|..|+++.+ .....++.+..--++-+++||+. .|++++++ ..+|+++....
T Consensus 822 ri~m~f~~~vghs~~fvTg~~pfl~~s~~~s~~k~f~~gNIPlvsv~p~s~----rgy~~Vd~~~~vr~~~~~~dn~y~g 897 (1319)
T COG5161 822 RIDMVFIKAVGHSFMFVTGKGPFLCRSRYTSSSKAFHRGNIPLVSVIPLSK----RGYLMVDNVLGVRASQYVFDNGYVG 897 (1319)
T ss_pred ceeEEEeeccCeEEEEEcCCccEEEEEeccCCcceeecCCCceeeeeeccc----ccEEEEecccceeEEEEEeccceec
Confidence 23444466789999999999998865 45566777777678889999976 68999987 58999998765
Q ss_pred CCeeeEEEeCCCcccEEEEecCCCEEEEEEEeeeccccCCCCCCCCCcccccccccccccccccccCCCCCccccCCCCC
Q psy7977 524 QKLHIRTVPLGEAPRRIAYQESSQTFGVITTRIDIQEADGSTPVRPSASTQAQNTTSSTISSLSYIKPGSTKQSTANQPA 603 (1225)
Q Consensus 524 ~~l~ir~IpLg~TprrIay~p~s~~~vV~t~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (1225)
.||+.+++|++.|..+++|||..+.|+|+.+.+ +
T Consensus 898 nK~p~k~~~~~Ktlqklvyh~~~~~~~Vgsc~~----------------------------------------------~ 931 (1319)
T COG5161 898 NKNPVKRTPKHKTLQKLVYHCAGRYMVVGSCEE----------------------------------------------A 931 (1319)
T ss_pred ccCceeeccccccccceeeeccceEEEEEeeee----------------------------------------------c
Confidence 589999999999999999999999999998543 3
Q ss_pred CcccceeecceeeeccccccccccccccchhhhhcccceeeecccCCCCCCceeeeecceeeeeeeccCCCCcccceeee
Q psy7977 604 DFNMEVEVHNLLIIDQNTFERNFTSSTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFII 683 (1225)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1225)
+|... +
T Consensus 932 ~f~~~------------------------------------------------------------------g-------- 937 (1319)
T COG5161 932 GFSPK------------------------------------------------------------------G-------- 937 (1319)
T ss_pred Ccccc------------------------------------------------------------------C--------
Confidence 33310 1
Q ss_pred eccccccceeeccceeeeeeeCCCCCccceeEEeeeeeeeeeeccCCCCccceeeeeeeccceeeeeeccccchhhhhhh
Q psy7977 684 TQRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTK 763 (1225)
Q Consensus 684 ~~~~~~~lv~ak~~~lei~~~~~~~l~~~~~~~~~g~i~~l~~~r~~~s~~d~l~i~t~~~~~~~~~~~~~~~~~~t~~~ 763 (1225)
++| |
T Consensus 938 ----------------------Edg---------------------------------------------E--------- 941 (1319)
T COG5161 938 ----------------------EDG---------------------------------------------E--------- 941 (1319)
T ss_pred ----------------------CCC---------------------------------------------C---------
Confidence 000 0
Q ss_pred ccCCCCcccCCCCCCCceeeeCCccceeeeEeecceeeeeccccccccccccchhhhhhhhccccccccCCCCceEEeee
Q psy7977 764 AHGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDNFELKASSIRMEELEIQDVQFLHGCQNPTIICIHQ 843 (1225)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~vDp~~r~~~~~~~~g~~~v~~~~~~~~~l~~~~~r~~el~~~~~~fl~~~~~p~~a~ly~ 843 (1225)
++
T Consensus 942 --------------~~---------------------------------------------------------------- 943 (1319)
T COG5161 942 --------------SG---------------------------------------------------------------- 943 (1319)
T ss_pred --------------cc----------------------------------------------------------------
Confidence 00
Q ss_pred ccCCcceeeeeeeeccccccCCCccccccccccccccccCCCCCceeEeeeeeeeeecCCccccccccccccceeEEeee
Q psy7977 844 DVNGRHVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIVCYAK 923 (1225)
Q Consensus 844 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lipvp~~~gG~~v~g~~~~~y~~~~~~~~~~~~~~~~~~~v~~~~ 923 (1225)
||+
T Consensus 944 ------------------------------------i~~----------------------------------------- 946 (1319)
T COG5161 944 ------------------------------------IPV----------------------------------------- 946 (1319)
T ss_pred ------------------------------------Ccc-----------------------------------------
Confidence 000
Q ss_pred ecccccceeccccchhhhhhhhhhhhcccCccccccceeeecccccCCCceecccccccCCCCCcccCCCCCCCCcceee
Q psy7977 924 VDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKPGSTKQSTANQPADFNMEVE 1003 (1225)
Q Consensus 924 ~d~~~~~~ll~~~~G~l~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~~~~ 1003 (1225)
| .| +..||..
T Consensus 947 -D------------------------------------------------------------------~N---vphaeg~ 956 (1319)
T COG5161 947 -D------------------------------------------------------------------TN---VPHAEGY 956 (1319)
T ss_pred -C------------------------------------------------------------------CC---Ccccccc
Confidence 0 00 1246668
Q ss_pred eEEEEEEECCCCcEEEEEECCCCCceEEEEEEEecC-----CCCeEEEEEeeeeCCCCCCCcceEEEEEEEeC-------
Q psy7977 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGE-----DPNTYFVLGTAVVHPEENEPKQGRIIIFHYDD------- 1071 (1225)
Q Consensus 1004 ~s~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~-----~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~------- 1071 (1225)
++.|-|++|.+|+++|+|||++||.+++|+.+.++. .+++|++|||++..+| |.|.+|+.|+|++++
T Consensus 957 ~~~vdL~spksw~vID~yef~~ne~v~~i~~~~l~~~~~tk~k~pyi~vgtt~~~gE-D~p~rG~~hv~eII~VVP~pg~ 1035 (1319)
T COG5161 957 RFYVDLYSPKSWEVIDTYEFDENEYVFHIKYLILDDMQGTKGKSPYILVGTTFIEGE-DRPARGRLHVLEIISVVPSPGS 1035 (1319)
T ss_pred eeeEEEecCcceeEeeeeecccceeeeeeeeeeeeccccccCCCceEEEEeeecccC-ccCCcCceEEEEEEEecCCCCC
Confidence 899999999999999999999999999999988853 4779999999999998 999999999999995
Q ss_pred ----CcEEEEEEEEecCceeeeccccCeEEEEeCCEEEEEEcCCCceee-eeecccceeEEEEEEEECCEEEEeeccccE
Q psy7977 1072 ----GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSL 1146 (1225)
Q Consensus 1072 ----~kL~lv~~~ev~G~v~al~~f~G~LLa~vg~~l~vy~l~~~~~L~-~e~~~~~~~i~~~l~~~g~~IlvGD~~kSv 1146 (1225)
.|||++..+|++|.|..+|+..||++.++||||+||++.++..+. +.+.+.+.+ .+++++.+|++++||+|+++
T Consensus 1036 P~t~~KLK~~~~Ee~kGTV~~vcEV~G~~~~~qgqKV~Vr~i~~~~~iipV~F~Dl~~f-t~s~k~~~Nlll~gD~~qg~ 1114 (1319)
T COG5161 1036 PFTDCKLKVLGIEETKGTVVRVCEVRGKIALCQGQKVMVRKIDRSSGIIPVGFYDLHIF-TSSIKVVKNLLLAGDIYQGL 1114 (1319)
T ss_pred CcccceeeEEehhhcccEEEEEEEEccEEEeccCcEEEEEEecccCCcceeEEEeeeee-eehhhhhhheeehhhhhcCc
Confidence 299999999999999999999999999999999999999877665 656666666 68899999999999999999
Q ss_pred EEEEEecCCCeEEEEeccCCCceeEEEEeeeCC---cEEEEcCCCcEEEEEeCCCCCCccccceeEEEEEEEEeCCce
Q psy7977 1147 TLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE---LFLGAENSYNLFICQKDSAATSDEDRTHLQEVGTVHLVGDGL 1221 (1225)
Q Consensus 1147 ~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~d---t~l~aD~~gNl~vl~~~~~~~~~~~~~rL~~~~~fhl~Ge~i 1221 (1225)
+|++|+++|++|+.+++....+.+++++||..+ .|+++|..||++++.|+|+.|.+..|+||.+++.||+ |...
T Consensus 1115 ~F~gF~~ePyRm~l~s~s~~~~n~~s~efLv~G~~lyf~~~Da~gnih~l~Y~P~np~S~sG~RLV~rssFtl-hs~~ 1191 (1319)
T COG5161 1115 SFFGFQSEPYRMHLISSSEPLRNATSTEFLVTGNELYFLCCDAKGNIHGLTYSPNNPISMSGARLVKRSSFTL-HSAE 1191 (1319)
T ss_pred EEEEecCCcEEEEEecCCchhhcchhhHhhccCCeeEEEEEcCCCCEEEEecCCCCccccCcceeEeeccccc-cchh
Confidence 999999999999999999999999999999877 7999999999999999999999999999999999999 7554
No 5
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=100.00 E-value=1.2e-43 Score=432.35 Aligned_cols=307 Identities=43% Similarity=0.710 Sum_probs=237.7
Q ss_pred ecCCCCCCCceeEEeeecceEEEEEeCCc----ceeEEe-eccCCCceeeeec------------CCeEEEEEcCCCEEE
Q psy7977 31 SIGSPKNLDNTLVLSFVGHTRVLTLSGAE----WGFHLL-RGFSSLGSLWNGW------------SERYLLGDLAGRLFM 93 (1225)
Q Consensus 31 ~~~~P~plGG~Lv~~~vg~n~liyvDq~~----~~~~~~-~~l~~~~~ifv~~------------~~~~LL~~e~G~Ly~ 93 (1225)
-+|+|.|.||+|| .|++.++|.++.. ...... .|......+|++| .+++||++++|+||+
T Consensus 160 LIPlp~~~ggllV---~~~~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~lL~~e~G~l~~ 236 (504)
T PF10433_consen 160 LIPLPNPPGGLLV---GGENIIIYKNHLIGSGDYSFLSIPSPPSSSSSLWTSWARPERNISYDKDGDRILLQDEDGDLYL 236 (504)
T ss_dssp EEEE-TTT-SEEE---EESSEEEEEE------TTEEEEE--H-HHHTS-EEEEEE------SSTTSSEEEEEETTSEEEE
T ss_pred EEEcCCCCcEEEE---ECCEEEEEecccccccccccccccCCccCCCceEEEEEeccccceecCCCCEEEEEeCCCeEEE
Confidence 4688999999999 9999999997532 122211 1101113455554 678999999999999
Q ss_pred EEEEeCcccCCceeeeecEEEEecc-cCcceeEEEecCC--eEEEEeecCCeEEEEEeeCCCCCCCceEEEeeeeccccc
Q psy7977 94 LLLEKEEKMDGTFSVKEPKVELLGE-ISIPECLTYLDNG--VVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPI 170 (1225)
Q Consensus 94 l~l~~d~~~~Gr~~Vs~i~i~~~~t-is~~SsL~~L~~g--~LFvGS~~GDS~L~~i~~~~ddd~~~l~v~d~l~NlgPI 170 (1225)
|++..+ + . ++++.++|+ .++|++++++++| +||+||++|||+|+++... +++++|+++|||||
T Consensus 237 l~l~~~----~--~--~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~------~l~~~~~~~N~~Pi 302 (504)
T PF10433_consen 237 LTLDND----G--G--SISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLS------NLEVLDSLPNWGPI 302 (504)
T ss_dssp EEEEEE----E--E--EEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESE------SEEEEEEE----SE
T ss_pred EEEEEC----C--C--eEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCC------CcEEEEeccCcCCc
Confidence 999987 2 2 689999999 9999999999999 9999999999999999954 49999999999999
Q ss_pred eeeEEeeccccCCc------cEEEEEecCCCccEEEEeecceee--EEEEeeCCCcceEeEeeeCCCCCCccEEEEEcCC
Q psy7977 171 IDMVVVDLERQGQG------QLVTCSGGFKEGSLRIIRNGIGIE--EHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVG 242 (1225)
Q Consensus 171 ~D~~v~d~~~~~~~------qLva~sG~g~~GsLrilR~GI~~~--~~~s~eLpgv~~iWtl~~~~~~~~d~yLVlSf~~ 242 (1225)
+||++++..++++. +||||||.|++|+|+++|+|++++ +++..++|+++++|+++....+ |.||++||++
T Consensus 303 ~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~~~~~~~l~~v~~iW~l~~~~~~--~~~lv~S~~~ 380 (504)
T PF10433_consen 303 VDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGLELASSELPGVTGIWTLKLSSSD--HSYLVLSFPN 380 (504)
T ss_dssp EEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--EEEEEEESTEEEEEEE-SSSSS--BSEEEEEESS
T ss_pred cceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceeeeeeccCCCCceEEEEeeecCCC--ceEEEEEcCC
Confidence 99999988666666 999999999999999999999999 9999999999999999976544 9999999999
Q ss_pred ceEEEEEc----CceeeeeccCCcccccCeEEEEeeCCCeEEEEccCcEEEEecCCcceeeeecCCCCCcEEEEEecCCE
Q psy7977 243 HTRVLTLS----GAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQ 318 (1225)
Q Consensus 243 ~T~Vl~i~----ge~veEv~~sgF~~~~~TL~ag~l~~~~iVQVT~~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n~~~ 318 (1225)
+|+||+++ +|+++|++..+|.++++||+||+++++++||||+++||+++....+...+|.+|.+..|++|+++++|
T Consensus 381 ~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~~~~ivQVt~~~i~l~~~~~~~~~~~w~~~~~~~I~~a~~~~~~ 460 (504)
T PF10433_consen 381 ETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVGDGRIVQVTPKGIRLIDLEDGKLTQEWKPPAGSIIVAASINDPQ 460 (504)
T ss_dssp EEEEEEES----SSEEEEE---TS-SSS-EEEEEEETTTEEEEEESSEEEEEESSSTSEEEEEE-TTS---SEEEESSSE
T ss_pred ceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcCCCeEEEEecCeEEEEECCCCeEEEEEeCCCCCeEEEEEECCCE
Confidence 99999995 35777775449999999999999999999999999999998766688999999999999999999999
Q ss_pred EEEE-ECCeEEEEEeeccceeEEee----eccCceeEEEEecc
Q psy7977 319 VLCA-TGCDVYYLEVHGSEIKQLAH----RALEYEVACLDISP 356 (1225)
Q Consensus 319 VlVa-sgg~Lv~feid~~~L~ev~~----~~l~~eIScLai~~ 356 (1225)
++++ +++++++|+++...+..... .+++.+|+||++.|
T Consensus 461 v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eis~l~i~p 503 (504)
T PF10433_consen 461 VLVALSGGELVYFELDDNKISVSDNDETILELDNEISCLSIEP 503 (504)
T ss_dssp EEEEE-TTEEEEEEEETTEEEEEEE----EE-SS-EEEEE---
T ss_pred EEEEEeCCcEEEEEEECCceeeeeeccccccCCCceEEEEeCC
Confidence 9998 89999999999775543322 24899999999876
No 6
>KOG1897|consensus
Probab=100.00 E-value=2e-43 Score=423.86 Aligned_cols=348 Identities=44% Similarity=0.760 Sum_probs=303.7
Q ss_pred ccccccceeeccceeeeeeeCCCCCccceeEEeeeeeeeeeeccCCCCccceeeeeeeccceeeeeeccccchhhhhhhc
Q psy7977 685 QRTDLNLVVAKNNRIEIHTVTPEGLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKA 764 (1225)
Q Consensus 685 ~~~~~~lv~ak~~~lei~~~~~~~l~~~~~~~~~g~i~~l~~~r~~~s~~d~l~i~t~~~~~~~~~~~~~~~~~~t~~~~ 764 (1225)
...+.+|+|||+|+||||.+.++||..+++..|||+|..|+.|||+++++|+|||+||+|+||+++||.+.. .-+.++
T Consensus 24 s~e~~nlivAk~~~lei~~~~~~GLq~i~sv~ifg~I~~i~~fRp~g~~kD~LfV~t~~~~~~iL~~d~~~~--~vv~~a 101 (1096)
T KOG1897|consen 24 SPENLNLIVAKGNRLEILLVEPNGLQPITSVPIFGTIATIALFRPPGSDKDYLFVATDSYRYFILEWDEESI--QVVTRA 101 (1096)
T ss_pred CccceeeeeeccceEEEEeeccccceeeEeeccceeEEEEEeecCCCCCcceEEEEECcceEEEEEEccccc--eEEEEe
Confidence 334589999999999999999999999999999999999999999999999999999999999999999733 345566
Q ss_pred cCCCCcccCCCCCCCceeeeCCccceeeeEeecceeeeeccccc-----cccccccchhhhhhhhccccccccCCCCceE
Q psy7977 765 HGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKD-----NFELKASSIRMEELEIQDVQFLHGCQNPTII 839 (1225)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~vDp~~r~~~~~~~~g~~~v~~~~~~-----~~~l~~~~~r~~el~~~~~~fl~~~~~p~~a 839 (1225)
+.|++++.+|++++|.+|+|||.+|.+.|++|+|.+.|+|+.++ ...+....+|+.|+++-|++|||+...|++|
T Consensus 102 ~~~v~dr~gr~s~~g~~~~VDp~~R~Igl~~yqgl~~vIp~d~~~sht~~s~l~~fn~rfdel~v~Di~fly~~s~pt~~ 181 (1096)
T KOG1897|consen 102 HGDVSDRSGRPSDNGQILLVDPKGRVIGLHLYQGLFKVIPIDSDESHTGGSLLKAFNVRFDELNVYDIKFLYGCSDPTLA 181 (1096)
T ss_pred cccccccccccCCCceEEEECCCCcEEEEEeecCeEEEEEecccccccCcccccccccccCcceEEEEEEEcCCCCCceE
Confidence 79999999999999999999999999999999999999999864 2344899999999999999999999999999
Q ss_pred EeeeccCCcceeeeeeeeccccccCCCccccccccccccccccCCCCCceeEeeeeeeeeecCCccccccccccccceeE
Q psy7977 840 CIHQDVNGRHVKTHEISLKEKEFTKTPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVAVAPQIIKSSTIV 919 (1225)
Q Consensus 840 ~ly~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lipvp~~~gG~~v~g~~~~~y~~~~~~~~~~~~~~~~~~~v 919 (1225)
+||++...+++|.-++.|...+|..-+|. ++++-+|.++||||.|.||+||+|+++|.|+++.+...+....-+.++++
T Consensus 182 vly~Ds~~~Hv~~yelnl~~ke~~~~~w~-~~v~~~a~~li~VP~~~gGvlV~ge~~I~Y~~~~~~~ai~p~~~~~~t~~ 260 (1096)
T KOG1897|consen 182 VLYKDSDGRHVKTYELNLRDKEFVKGPWS-NNVDNGASMLIPVPSPIGGVLVIGEEFIVYMSGDNFVAIAPLTAEQSTIV 260 (1096)
T ss_pred EEEEcCCCcEEEEEEeccchhhccccccc-cccccCCceeeecCCCCceEEEEeeeEEEEeeCCceeEecccccCCceEE
Confidence 99999998899999999999999988898 88999999999999999999999999999999988888887778889999
Q ss_pred EeeeecccccceeccccchhhhhhhhhhhhcccCcccccc--ceeeecccccCCCc------------------------
Q psy7977 920 CYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKE--PKVELLGEHCKGPV------------------------ 973 (1225)
Q Consensus 920 ~~~~~d~~~~~~ll~~~~G~l~~l~~~~~~~~~~~~~v~~--~~~~~~~~~~~~~~------------------------ 973 (1225)
||+.+|.++.||||+|.+|+||+|.+.+. ...|++ |+++++|++|.|+|
T Consensus 261 ~~~~v~~~~~~yLl~d~~G~Lf~l~l~~~-----~e~~s~~~lkve~lge~siassi~~L~ng~lFvGS~~gdSqLi~L~ 335 (1096)
T KOG1897|consen 261 CYGRVDLQGSRYLLGDEDGMLFKLLLSHT-----GETVSGLDLKVEYLGETSIASSINYLDNGVLFVGSRFGDSQLIKLN 335 (1096)
T ss_pred EcccccCCccEEEEecCCCcEEEEEeecc-----cccccceEEEEEecCCcchhhhhhcccCceEEEeccCCceeeEEcc
Confidence 99999999999999999999999999865 367777 99999999999999
Q ss_pred ---------eecccccccCC------------CCCc--ccCCCCCCCCcceeeeEEEEEEECC-CCcEEEEEECCCCCce
Q psy7977 974 ---------VEMSSLSYIKP------------GSTK--QSTANQPADFNMEVEVHNLLIIDQN-TFEILHAHQLFPGEYA 1029 (1225)
Q Consensus 974 ---------~~~~~~~~~~p------------g~~~--~~~~~~~~~~~~~~~~s~irlvdp~-t~~~i~~~eL~~nE~~ 1029 (1225)
+.+++++|++| |.|+ .+|+..+ .+++|++-+. .-+.+.+++|+.=-..
T Consensus 336 ~e~d~gsy~~ilet~~NLgPI~Dm~Vvd~d~q~q~qivtCsGa~k--------dgSLRiiRngi~I~e~A~i~l~Gikg~ 407 (1096)
T KOG1897|consen 336 TEPDVGSYVVILETFVNLGPIVDMCVVDLDRQGQGQIVTCSGAFK--------DGSLRIIRNGIGIDELASIDLPGIKGM 407 (1096)
T ss_pred ccCCCCchhhhhhhcccccceeeEEEEeccccCCceEEEEeCCCC--------CCcEEEEecccccceeeEeecCCccce
Confidence 22799999999 3333 3332222 2679998875 4577788899875666
Q ss_pred EEEEEEEecCCCCeEEEEEe
Q psy7977 1030 LSLISSKFGEDPNTYFVLGT 1049 (1225)
Q Consensus 1030 ~si~~v~~~~~~~~~lvVGT 1049 (1225)
+++.+. +...-.+|++|+=
T Consensus 408 w~lk~~-v~~~~d~ylvlsf 426 (1096)
T KOG1897|consen 408 WSLKSM-VDENYDNYLVLSF 426 (1096)
T ss_pred eEeecc-ccccCCcEEEEEe
Confidence 666533 3333335999883
No 7
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=100.00 E-value=9.8e-37 Score=351.24 Aligned_cols=219 Identities=32% Similarity=0.575 Sum_probs=189.6
Q ss_pred eEEEEEEECCCCcEEEEEECCCCCceEEEEEEEecCC---CCeEEEEEeeeeCCCCCCCcceEEEEEEEeCC-----cEE
Q psy7977 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGED---PNTYFVLGTAVVHPEENEPKQGRIIIFHYDDG-----KLQ 1075 (1225)
Q Consensus 1004 ~s~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~---~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~-----kL~ 1075 (1225)
+|+|||+||.+|+++++++|++||.+.|++.++|.++ .++|+||||++..+++..+..|||++|++.+. +|+
T Consensus 1 ~s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~ 80 (321)
T PF03178_consen 1 ASSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLK 80 (321)
T ss_dssp --EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEE
T ss_pred CcEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEE
Confidence 4899999999999999999999999999999999865 58999999999998855555599999999983 999
Q ss_pred EEEEEEecCceeeeccccCeEEEEeCCEEEEEEcCCCc-eeeeeecccceeEEEEEEEECCEEEEeeccccEEEEEEecC
Q psy7977 1076 QIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEK-ELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTM 1154 (1225)
Q Consensus 1076 lv~~~ev~G~v~al~~f~G~LLa~vg~~l~vy~l~~~~-~L~~e~~~~~~~i~~~l~~~g~~IlvGD~~kSv~~l~y~~~ 1154 (1225)
++|+++++|+|+||+.|+|+|++|+|++|++|+|+.++ +++......+.+ ++++.+.+|+|+|||+++|++|++|+++
T Consensus 81 ~i~~~~~~g~V~ai~~~~~~lv~~~g~~l~v~~l~~~~~l~~~~~~~~~~~-i~sl~~~~~~I~vgD~~~sv~~~~~~~~ 159 (321)
T PF03178_consen 81 LIHSTEVKGPVTAICSFNGRLVVAVGNKLYVYDLDNSKTLLKKAFYDSPFY-ITSLSVFKNYILVGDAMKSVSLLRYDEE 159 (321)
T ss_dssp EEEEEEESS-EEEEEEETTEEEEEETTEEEEEEEETTSSEEEEEEE-BSSS-EEEEEEETTEEEEEESSSSEEEEEEETT
T ss_pred EEEEEeecCcceEhhhhCCEEEEeecCEEEEEEccCcccchhhheecceEE-EEEEeccccEEEEEEcccCEEEEEEEcc
Confidence 99999999999999999999999999999999999988 555333333344 7999999999999999999999999998
Q ss_pred CCeEEEEeccCCCceeEEEEee-eCCcEEEEcCCCcEEEEEeCCCCCCccccc-eeEEEEEEEEeCCceeec
Q psy7977 1155 EGSFEEISRDYNPNWMTSIEIL-DDELFLGAENSYNLFICQKDSAATSDEDRT-HLQEVGTVHLVGDGLVQC 1224 (1225)
Q Consensus 1155 ~~~L~~~arD~~~~wvta~~~L-d~dt~l~aD~~gNl~vl~~~~~~~~~~~~~-rL~~~~~fhl~Ge~i~~~ 1224 (1225)
.++|.++|||+.++|++|+++| |+++++++|++||+++++++|+..++.+++ +|+.+++||+ |+.++..
T Consensus 160 ~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~l-g~~v~~~ 230 (321)
T PF03178_consen 160 NNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHL-GDIVNSF 230 (321)
T ss_dssp TE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE--SS-EEEE
T ss_pred CCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEEC-CCccceE
Confidence 8899999999999999999999 778999999999999999999999999998 9999999999 9998764
No 8
>KOG1896|consensus
Probab=99.97 E-value=2.1e-30 Score=316.38 Aligned_cols=285 Identities=20% Similarity=0.289 Sum_probs=227.8
Q ss_pred eeccccccceeeccceeeeeeeCC-----------CC-------CccceeEEeeeeeeeeeeccCCCCccceeeeeeecc
Q psy7977 683 ITQRTDLNLVVAKNNRIEIHTVTP-----------EG-------LRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRY 744 (1225)
Q Consensus 683 ~~~~~~~~lv~ak~~~lei~~~~~-----------~~-------l~~~~~~~~~g~i~~l~~~r~~~s~~d~l~i~t~~~ 744 (1225)
+|+..+.||||+++|.|++|+++. ++ |.|+.++.+||+|+.|+.++.+|++.|.|++.|+++
T Consensus 22 Ft~~~~~nlvV~~~N~L~vyri~~~~e~~t~~~~~~~~~~~~~~LeLv~~~~l~GnV~si~~~~~~gs~rD~LlL~f~~A 101 (1366)
T KOG1896|consen 22 FTNNRTENLVVAGTNILRVYRISRDAEALTKNDPGDMGKAHRKKLELVAEFKLFGNVTSIAKLPLKGSNRDALLLLFKDA 101 (1366)
T ss_pred EecCCCcceEEecccEEEEEEeccchhhccccCccccccccceEEEEEEEEEeecceeeEEEeecCCCCcceEEEEeccc
Confidence 456677899999999999999988 32 999999999999999999999999999999999999
Q ss_pred ceeeeeeccccchhhhhhhccCCCCcccCCCCCCCc----eeeeCCccceeeeEeecceeeeecccccc-----c-----
Q psy7977 745 NAMILECRGDIDNLEILTKAHGNVSDRIGKPSENGI----IAIIDPEARVIGLRLYNGLFKIIPLEKDN-----F----- 810 (1225)
Q Consensus 745 ~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~----~~~vDp~~r~~~~~~~~g~~~v~~~~~~~-----~----- 810 (1225)
|.++++||++++.|+|.+.||++. +..+++..|+ .++|||++||++|..|...++++|+..++ +
T Consensus 102 KiSvlefD~~t~sl~TlSLHyfE~--~~~~~~~~~~~~~p~vrvDPdsrCa~llvyg~~m~iLpf~~~e~~~~~~~~~~~ 179 (1366)
T KOG1896|consen 102 KISVLEFDPQTNSLRTLSLHYFEG--PEFRKGLVGRAKIPTVRVDPDSRCALLLVYGLRMAILPFRVNEHLDDEELFPSG 179 (1366)
T ss_pred eEEEEEecCCccceeeeeeEEecc--ccccccccccccCceEEECCCCCeEEEEEecceEEEeecccccccccccccccc
Confidence 999999999999999999999964 4455544444 59999999999999999999999996311 0
Q ss_pred ----cc-c-ccchhhhh-----hhhccccccccCCCCceEEeeeccCCccee---------eeeeeec-cccccCCCccc
Q psy7977 811 ----EL-K-ASSIRMEE-----LEIQDVQFLHGCQNPTIICIHQDVNGRHVK---------THEISLK-EKEFTKTPWKQ 869 (1225)
Q Consensus 811 ----~l-~-~~~~r~~e-----l~~~~~~fl~~~~~p~~a~ly~~~~~~~~~---------~~~~~l~-~~~~~~~~~~~ 869 (1225)
.. . ...+.+.| ++|+|++|||+|.+||+||||+|...|..+ +..++|. ..+-+|+.|..
T Consensus 180 ~~~ss~~~pSyvi~~reLdeki~niiD~qFLhgY~ePTl~ILyep~~tw~grv~~r~dt~~~vaisLni~q~~hpVI~sv 259 (1366)
T KOG1896|consen 180 FSKSSFTAPSYVIALRELDEKIKNIIDFQFLHGYYEPTLAILYEPEQTWAGRVILRKDTCVLVAISLNITQKVHPVIWSV 259 (1366)
T ss_pred ccccccccceeEEEhhhhhhhhccceeEEeecCcccceEEEEecccccccceEEEecCcEEEEEEEcCccccccceEeee
Confidence 11 2 22234444 479999999999999999999999999954 3344444 45678899999
Q ss_pred cccccccccccccCCCCCceeEeeeeeeeeecCCcccc-c----------ccccccccee---EEeeeec-ccccceecc
Q psy7977 870 DNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVA-V----------APQIIKSSTI---VCYAKVD-ANGERYLLG 934 (1225)
Q Consensus 870 ~~~~~~~~~lipvp~~~gG~~v~g~~~~~y~~~~~~~~-~----------~~~~~~~~~~---v~~~~~d-~~~~~~ll~ 934 (1225)
..+|.++..+.+||.|+||+||.+.|.++|+++..... + ..|+...+.| ++-++.= |+..+-++.
T Consensus 260 ~sLP~D~~~~~~vp~piGgvLv~~~n~~iy~nqsv~~~gv~LNs~a~~~t~fpl~~qs~v~i~ld~a~~t~i~~dk~vis 339 (1366)
T KOG1896|consen 260 LSLPFDCYQATAVPTPIGGVLVFTVNNLIYLNQSVSPYGVALNSYASKYTAFPLIPQSGVRIELDCANATWISNDKCVIS 339 (1366)
T ss_pred ccCChhhhhceeecccCccEEEEeeeeEEEEccCCCceeEEecchhhcccCCccccccceEEEEeeccceeecCCeEEEe
Confidence 99999999999999999999999999999999884421 1 2334433322 2222222 346678999
Q ss_pred ccchhhhhhhhhhhhcccCccccccceeeecccccCCCc
Q psy7977 935 DLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPV 973 (1225)
Q Consensus 935 ~~~G~l~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 973 (1225)
..-|++|+|++.+|. ++.|..+++.++---..+++
T Consensus 340 ~~~Gd~y~Ltl~~D~----~r~V~~~~f~k~~asvl~t~ 374 (1366)
T KOG1896|consen 340 LKNGDLYLLTLILDI----GRSVQLLHFDKFKASVLATS 374 (1366)
T ss_pred cCCCcEEEEEEEecc----ccchhhhhhhhhhcccceee
Confidence 999999999999964 78899888877744444444
No 9
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=99.92 E-value=1.1e-23 Score=257.24 Aligned_cols=387 Identities=21% Similarity=0.298 Sum_probs=233.0
Q ss_pred ceeeeeeeccceeeeeeccccchhhhhhhc-cCCCCcccCCCCCCCceeeeCCccceeeeEeecceeeeecccc-ccc--
Q psy7977 735 DLLFIITQRYNAMILECRGDIDNLEILTKA-HGNVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK-DNF-- 810 (1225)
Q Consensus 735 d~l~i~t~~~~~~~~~~~~~~~~~~t~~~~-~~~~~~~~~~~~~~~~~~~vDp~~r~~~~~~~~g~~~v~~~~~-~~~-- 810 (1225)
|+|||+||++++++++|+++++++.+..-| +.++.+...|..++|.++.|||.|||+++++|||.+.|+|+.+ .+.
T Consensus 1 D~L~v~tdsg~l~~l~~~~~~~~~~~~~v~~~~~~~~~~~r~~~~G~~l~vDP~~R~i~v~a~e~~~~v~~l~~~~~~~~ 80 (504)
T PF10433_consen 1 DSLVVTTDSGKLSILEYDPSTHGFFKEFVHQWEPLSKSGSRLSQPGQYLAVDPSGRCIAVSAYEGNFLVYPLNRSLDSDI 80 (504)
T ss_dssp -EEEEEETTTEEEEEEEEEETTEE-E-EEEEEEE---SSSEB-TT--EEEE-TTSSEEEEEEBTTEEEEEE-SS----T-
T ss_pred CEEEEEECCCCEEEEEEECCCCccceeeEEEeEecCCCCCChhcCCcEEEECCcCCEEEEEecCCeEEEEEecccccccc
Confidence 899999999999999999988876432222 3677889999999999999999999999999999999999986 111
Q ss_pred cc-cccchh-hhhhhhccccccc---cCCCCceEEeeeccCCcc-eeeeeeeec------cccccCCCcccccccccccc
Q psy7977 811 EL-KASSIR-MEELEIQDVQFLH---GCQNPTIICIHQDVNGRH-VKTHEISLK------EKEFTKTPWKQDNIEMEASL 878 (1225)
Q Consensus 811 ~l-~~~~~r-~~el~~~~~~fl~---~~~~p~~a~ly~~~~~~~-~~~~~~~l~------~~~~~~~~~~~~~~~~~~~~ 878 (1225)
.. ...... .+|++|.|.+||| ++++|+||+||.+...+. .++.++.+. .++.....+.+.. ...+++
T Consensus 81 ~~~~~~~~pi~s~~~i~~~~FL~~~~~~~~p~la~L~~~~~~~~~~~~y~w~~~~~l~~~~~~~~~~~~l~~~-~~~p~~ 159 (504)
T PF10433_consen 81 AFSPHINSPIKSEGNILDMCFLHPSVGYDNPTLAILYVDSQRRTHLVTYEWSLDDGLNHVISKSTLPIRLPNE-DELPSF 159 (504)
T ss_dssp TT---EEEE--S-SEEEEEEEES---S-SS-EEEEEEEETT-EEEEEEEE--------EETTTTEEEE--EEE-E-TTEE
T ss_pred cccccccccccCCceEEEEEEEecccCCCCceEEEEEEEecccceeEEEeeecccccceeeeecccccccccc-CCCccE
Confidence 11 111122 3689999999999 778999999999965443 443342222 1222221111111 222399
Q ss_pred ccccCCCCCceeEeeeeeeeeecCCcc----c--ccccc-ccccceeEEeee------ecccccceeccccchhhhhhhh
Q psy7977 879 VIPVPEPLGGAIIIGQESILYHSGKSY----V--AVAPQ-IIKSSTIVCYAK------VDANGERYLLGDLAGRLFMLLL 945 (1225)
Q Consensus 879 lipvp~~~gG~~v~g~~~~~y~~~~~~----~--~~~~~-~~~~~~~v~~~~------~d~~~~~~ll~~~~G~l~~l~~ 945 (1225)
|||||.|.||+||+|++.+.|.+.... . .+..+ ..+...|++|+. .+.++.+|||++++|+||+|++
T Consensus 160 LIPlp~~~ggllV~~~~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~lL~~e~G~l~~l~l 239 (504)
T PF10433_consen 160 LIPLPNPPGGLLVGGENIIIYKNHLIGSGDYSFLSIPSPPSSSSSLWTSWARPERNISYDKDGDRILLQDEDGDLYLLTL 239 (504)
T ss_dssp EEEE-TTT-SEEEEESSEEEEEE------TTEEEEE--H-HHHTS-EEEEEE------SSTTSSEEEEEETTSEEEEEEE
T ss_pred EEEcCCCCcEEEEECCEEEEEecccccccccccccccCCccCCCceEEEEEeccccceecCCCCEEEEEeCCCeEEEEEE
Confidence 999999999999999999999975432 2 22232 446799999987 5667999999999999999999
Q ss_pred hhhhcccCccccccceeeeccc-ccCCCc------------------------------eecccccccCC------CC--
Q psy7977 946 EKEEKMDGTFSVKEPKVELLGE-HCKGPV------------------------------VEMSSLSYIKP------GS-- 986 (1225)
Q Consensus 946 ~~~~~~~~~~~v~~~~~~~~~~-~~~~~~------------------------------~~~~~~~~~~p------g~-- 986 (1225)
+.+. . ++++.++|+ .+.+++ ..+++++|++| +.
T Consensus 240 ~~~~-----~---~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~~N~~Pi~D~~v~~~~ 311 (504)
T PF10433_consen 240 DNDG-----G---SISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSLPNWGPIVDFCVVDSS 311 (504)
T ss_dssp EEEE-----E---EEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE----SEEEEEEE-TS
T ss_pred EECC-----C---eEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEeccCcCCccceEEeccc
Confidence 9974 2 899999999 888887 33889999999 21
Q ss_pred ----C------c--ccCCCCCCCCcceeeeEEEEEEECC-CCc--EEEEEECCCCCceEEEEEEEecCCCCeEEEEEeee
Q psy7977 987 ----T------K--QSTANQPADFNMEVEVHNLLIIDQN-TFE--ILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAV 1051 (1225)
Q Consensus 987 ----~------~--~~~~~~~~~~~~~~~~s~irlvdp~-t~~--~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~ 1051 (1225)
. + ++|+.+ ..++++++-.. ..+ .+...+|.. +..+=.++...+...|+++...
T Consensus 312 ~~~~~~~~~~~~lv~~sG~g--------~~gsL~~lr~Gi~~~~~~~~~~~l~~---v~~iW~l~~~~~~~~~lv~S~~- 379 (504)
T PF10433_consen 312 NSGQPSNPSSDQLVACSGAG--------KRGSLRILRNGIGIEGLELASSELPG---VTGIWTLKLSSSDHSYLVLSFP- 379 (504)
T ss_dssp SSSS-------EEEEEESSG--------GG-EEEEEEESBEEE--EEEEEEEST---EEEEEEE-SSSSSBSEEEEEES-
T ss_pred cCCCCcccccceEEEEECcC--------CCCcEEEEeccCCceeeeeeccCCCC---ceEEEEeeecCCCceEEEEEcC-
Confidence 1 1 222221 23788888543 233 445555544 4444334443333678888752
Q ss_pred eCCCCCCCcceEEEEEEEe--C--CcEEEEEEEEe--cCceeeeccc-cCeEEEEeCCEEEEEEcCCCceee-eeecccc
Q psy7977 1052 VHPEENEPKQGRIIIFHYD--D--GKLQQIAEKEI--KGACYSMCEF-NGKLLASINSTVRLFEWTNEKELR-LECSHFN 1123 (1225)
Q Consensus 1052 ~~~eed~~~~GrI~vf~i~--~--~kL~lv~~~ev--~G~v~al~~f-~G~LLa~vg~~l~vy~l~~~~~L~-~e~~~~~ 1123 (1225)
.+-.+|++. + +.++.+....+ +.+=-+.+.+ +++++=---+.+++++.+..+... .+.. ..
T Consensus 380 ----------~~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~~~~ivQVt~~~i~l~~~~~~~~~~~w~~~-~~ 448 (504)
T PF10433_consen 380 ----------NETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVGDGRIVQVTPKGIRLIDLEDGKLTQEWKPP-AG 448 (504)
T ss_dssp ----------SEEEEEEES----SSEEEEE---TS-SSS-EEEEEEETTTEEEEEESSEEEEEESSSTSEEEEEE-T-TS
T ss_pred ----------CceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcCCCeEEEEecCeEEEEECCCCeEEEEEeCC-CC
Confidence 134566664 2 35655522122 2222233344 678887888899999987666543 2121 12
Q ss_pred eeEEEEEEEECCEEEEeeccccEEEEEEecC
Q psy7977 1124 NIIALFLKVKGDFILVGDLMRSLTLLQYKTM 1154 (1225)
Q Consensus 1124 ~~i~~~l~~~g~~IlvGD~~kSv~~l~y~~~ 1154 (1225)
.. ++.-.+.++.++++-.-+.+.++..+..
T Consensus 449 ~~-I~~a~~~~~~v~v~~~~~~~~~~~~~~~ 478 (504)
T PF10433_consen 449 SI-IVAASINDPQVLVALSGGELVYFELDDN 478 (504)
T ss_dssp ----SEEEESSSEEEEEE-TTEEEEEEEETT
T ss_pred Ce-EEEEEECCCEEEEEEeCCcEEEEEEECC
Confidence 22 3445466789999999999888877653
No 10
>KOG1898|consensus
Probab=99.75 E-value=1.1e-16 Score=195.38 Aligned_cols=273 Identities=17% Similarity=0.227 Sum_probs=210.0
Q ss_pred ccceeeccceeeeeeeCCC--CCccceeEEeeeeeeeeeeccCCCCccceeeeeeeccceeeeeeccccchhhhhhhccC
Q psy7977 689 LNLVVAKNNRIEIHTVTPE--GLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTKAHG 766 (1225)
Q Consensus 689 ~~lv~ak~~~lei~~~~~~--~l~~~~~~~~~g~i~~l~~~r~~~s~~d~l~i~t~~~~~~~~~~~~~~~~~~t~~~~~~ 766 (1225)
-++|++++..||+|++++. .|+.++++.+||+|++|+.||..+-.+|+|.|++|.+++++++++.|.+.++++++ .
T Consensus 28 qeIv~~~~s~l~L~~~d~~~G~l~~i~~~~vFg~Irsla~~~lt~~~kD~LaV~SDSGri~il~y~~ek~~~~~~~q--e 105 (1205)
T KOG1898|consen 28 QEIVLGRGSILELYRIDENDGRLKTICRQEVFGTIRSLAAFRLTGGTKDYLAVGSDSGRISILEYNNEKNHFEKLHQ--E 105 (1205)
T ss_pred heEEEEeeeEEEEEEecCCCceEEEEEEEeehhhhhhhhccccCCCCccEEEEEcCCceEEEEEechhhhccccccc--c
Confidence 4689999999999999877 69999999999999999999999999999999999999999999999998988888 3
Q ss_pred CCCcccCCCCCCCceeeeCCccceeeeEeecceeeeecccccc-ccccccchhh-hhh-hhccccccccC-------CCC
Q psy7977 767 NVSDRIGKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEKDN-FELKASSIRM-EEL-EIQDVQFLHGC-------QNP 836 (1225)
Q Consensus 767 ~~~~~~~~~~~~~~~~~vDp~~r~~~~~~~~g~~~v~~~~~~~-~~l~~~~~r~-~el-~~~~~~fl~~~-------~~p 836 (1225)
++..--.|..-+|.++-+||.||+.++..-|.+.=|+-+..+. ..| ++ +.| .+|+...+... .||
T Consensus 106 tfGks~~rrivpG~y~~idp~Gra~misave~~kLvyvlnrD~~a~l-----tisSpleahk~~sic~~l~~Vd~gf~np 180 (1205)
T KOG1898|consen 106 TFGKSGCRRIVPGQYLAIDPKGRAVMISAVEKQKLVYVLNRDGAARL-----TISSPLEAHKAHSICLDLVGVDVGFENP 180 (1205)
T ss_pred ccCcccceEeccccEEEEcCCccceeeehhhcCcEEEEEccchhhhc-----eecCchhhccCCcEEEEEEEEeccCCCc
Confidence 3344444456899999999999999998888777777775322 222 11 123 25555555443 399
Q ss_pred ceEEeeeccCCc---c----eeeeeeeec----cccccCC-CccccccccccccccccCC---CCCceeEeeeeeeeeec
Q psy7977 837 TIICIHQDVNGR---H----VKTHEISLK----EKEFTKT-PWKQDNIEMEASLVIPVPE---PLGGAIIIGQESILYHS 901 (1225)
Q Consensus 837 ~~a~ly~~~~~~---~----~~~~~~~l~----~~~~~~~-~~~~~~~~~~~~~lipvp~---~~gG~~v~g~~~~~y~~ 901 (1225)
+||.|.-++... + ......-++ ..+++++ |.-....+..+.++++||- ..-|++||.++.+.|++
T Consensus 181 ~fa~LE~dy~~a~~d~tgeaa~~~~~~l~fYeldlglnhvvrk~s~p~~~~~n~l~~VP~G~D~ps~v~vc~~n~~~y~~ 260 (1205)
T KOG1898|consen 181 IFAALERDYSEADNDPTGEAATMTQKVLTFYELDLGLNHVVRKASEPVNHFGNFLLTVPGGSDGPSGVLVCAENYLLYRN 260 (1205)
T ss_pred eEEEEeechhhcccCchhhhhhccccceeEEEEecccceeEEEcccccCCCceEEEEecCCCCCCcceEEecCceeeccc
Confidence 999996553211 1 111111122 3455566 6666677889999999993 23489999999999999
Q ss_pred CCccccc----c---cccc---ccceeEEeeeeccc-ccceeccccchhhhhhhhhhhhcccCccccccceeeecccccC
Q psy7977 902 GKSYVAV----A---PQII---KSSTIVCYAKVDAN-GERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCK 970 (1225)
Q Consensus 902 ~~~~~~~----~---~~~~---~~~~~v~~~~~d~~-~~~~ll~~~~G~l~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~ 970 (1225)
..-+.-+ + ..+. +.+++++-+.+..+ ..+||+.-+||+||++|+++|. ..|.+++++|+++++.
T Consensus 261 ~~d~p~~ri~~~rr~~~L~~~~~~vliv~s~~hk~k~~ff~llqt~~GD~fk~tl~~d~-----d~v~el~lkYfDtvp~ 335 (1205)
T KOG1898|consen 261 LGDHPDVRIPIERRINELSDAEDGVLIVSSAEHKTKSMFFFLLQTEYGDLFKLTLEHDG-----DNVVELRLKYFDTVPC 335 (1205)
T ss_pred cccCCCEEeccccccccCCccccccEEEEeecccccCCeEEEEEecCCceEEEEEecCC-----CcceeeeeehhcCCcc
Confidence 7744432 1 1343 56888888888864 7888999999999999999983 4999999999999988
Q ss_pred CCc
Q psy7977 971 GPV 973 (1225)
Q Consensus 971 ~~~ 973 (1225)
+..
T Consensus 336 a~~ 338 (1205)
T KOG1898|consen 336 ALQ 338 (1205)
T ss_pred ceE
Confidence 877
No 11
>COG5161 SFT1 Pre-mRNA cleavage and polyadenylation specificity factor [RNA processing and modification]
Probab=99.48 E-value=2.5e-14 Score=170.91 Aligned_cols=268 Identities=15% Similarity=0.162 Sum_probs=194.4
Q ss_pred ccccccceeeccceeeeeeeCCC-CCccceeEEeeeeeeeeeeccCCCCccceeeeeeeccceeeeeeccccchhhhhhh
Q psy7977 685 QRTDLNLVVAKNNRIEIHTVTPE-GLRPVKEIFLYGKIAVMKFFRGPTDKKDLLFIITQRYNAMILECRGDIDNLEILTK 763 (1225)
Q Consensus 685 ~~~~~~lv~ak~~~lei~~~~~~-~l~~~~~~~~~g~i~~l~~~r~~~s~~d~l~i~t~~~~~~~~~~~~~~~~~~t~~~ 763 (1225)
.+--.+|+|.|+|.++||+...+ ||.++.++.++|.||.+.....++|++|.|++.|-+++.+++.++...+++.|++.
T Consensus 24 ~s~~~~llv~~~Nil~v~~~~~d~~l~l~de~~~~e~~t~I~~~pq~~se~~~lll~t~~akis~lrf~sq~n~f~Tisl 103 (1319)
T COG5161 24 PSRTCSLLVYNGNILAVRLWKYDSGLVLVDEHMLLEKVTQIEKYPQISSEQDGLLLLTHRAKISLLRFDSQANEFRTISL 103 (1319)
T ss_pred ccccceEEEEeccEEEEEEeeccCCeeEchHHhhhhhhhhhhhcccccCccceEEEEeccceEEEEEehhhcccceeEEE
Confidence 33356899999999999997555 79999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccc--CCCCCCCceeeeCCccceeeeEeecceeeeecccc---c-------c----------------------
Q psy7977 764 AHGNVSDRI--GKPSENGIIAIIDPEARVIGLRLYNGLFKIIPLEK---D-------N---------------------- 809 (1225)
Q Consensus 764 ~~~~~~~~~--~~~~~~~~~~~vDp~~r~~~~~~~~g~~~v~~~~~---~-------~---------------------- 809 (1225)
||++..-.. .-+-.--..+.-||.+ .+++++||++.+.+||-. + .
T Consensus 104 hyyeGKfkgksLvelak~stle~D~~s-scaLlfneDi~~flpfhvnkndddev~~d~D~~~~~~~~~h~~i~psqgtnt 182 (1319)
T COG5161 104 HYYEGKFKGKSLVELAKFSTLEFDIRS-SCALLFNEDIGNFLPFHVNKNDDDEVRIDVDLGMFQMSKRHFSIFPSQGTNT 182 (1319)
T ss_pred eeeccccCCchhhhhhhhhheeeccCc-cchhhhhhhhhhcccccccCCccccccccccccHHHHHHHHhhcCCCCCccc
Confidence 999765221 1122233467789998 556999999999999972 0 0
Q ss_pred ----------ccc-cccch-hhhhh-----hhccccccccCCCCceEEeeeccCCcceeeeeeeec----ccccc--C--
Q psy7977 810 ----------FEL-KASSI-RMEEL-----EIQDVQFLHGCQNPTIICIHQDVNGRHVKTHEISLK----EKEFT--K-- 864 (1225)
Q Consensus 810 ----------~~l-~~~~~-r~~el-----~~~~~~fl~~~~~p~~a~ly~~~~~~~~~~~~~~l~----~~~~~--~-- 864 (1225)
.++ .|..+ ..+|| +|.|++||.+|+.||+|+||+|...|..++...+.. +.++| +
T Consensus 183 fnkrkrt~~~~kfsaPs~Vl~~seld~~ikniiD~~FL~ny~~PTvallY~Pkl~~~~~~ti~k~p~~~~v~Tldl~~~~ 262 (1319)
T COG5161 183 FNKRKRTLFPGKFSAPSKVLKFSELDGKIKNIIDFVFLENYSIPTVALLYDPKLSLPRKYTILKNPYNAIVFTLDLGAGR 262 (1319)
T ss_pred cchhhhhhcCCcccCceeEEEehhhhccccccEEEEeeccCCCceEEEEecccccccceeEeecCceeEEEEEEecCcch
Confidence 134 44544 45565 799999999999999999999999998665555443 11221 1
Q ss_pred --CCccccccccccccccccCCCCCceeEeeeeeeeeecCCcccc-c--c--------cc-cc------------c-cce
Q psy7977 865 --TPWKQDNIEMEASLVIPVPEPLGGAIIIGQESILYHSGKSYVA-V--A--------PQ-II------------K-SST 917 (1225)
Q Consensus 865 --~~~~~~~~~~~~~~lipvp~~~gG~~v~g~~~~~y~~~~~~~~-~--~--------~~-~~------------~-~~~ 917 (1225)
+...-..+|-+-..-+|+|. |.|++|.|.++|+|.....+ + + .+ ++ . .+|
T Consensus 263 saVI~~~~~lP~d~~~~v~~p~---Gall~g~neli~idstg~~~~I~lNs~~~k~~~~~~v~d~s~~d~n~~~~gttsI 339 (1319)
T COG5161 263 SAVIDEFLVLPRDFRVTVAGPV---GALLFGSNELILIDSTGSSYTIPLNSMSEKYGGNKIVEDISLSDVNCFSRGTTSI 339 (1319)
T ss_pred hhhhHhHhcCCceEEEEEeccc---ceEEEecccEEEEecCCcEEEeechhhHHHhcCCceEeecccceeeEeecCceee
Confidence 11111112333344455554 99999999999999663332 1 1 11 11 1 244
Q ss_pred eEEeeeecccccceeccccchhhhhhhhhhhhcccCccccccceee
Q psy7977 918 IVCYAKVDANGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVE 963 (1225)
Q Consensus 918 ~v~~~~~d~~~~~~ll~~~~G~l~~l~~~~~~~~~~~~~v~~~~~~ 963 (1225)
|....|.- .+..+|.|--|+.|.|.|.+| ...|.++.+-
T Consensus 340 wipsSK~~--~etl~l~dl~g~~yyl~~~~d-----gk~iigfdi~ 378 (1319)
T COG5161 340 WIPSSKCL--IETLFLGDLNGDRYYLRISMD-----GKRIIGFDIA 378 (1319)
T ss_pred eccCcccc--cceEEEEecCCCEEEEEEEec-----cceeecccee
Confidence 44444444 577799999999999999886 4777774443
No 12
>KOG0291|consensus
Probab=97.89 E-value=0.16 Score=63.06 Aligned_cols=423 Identities=16% Similarity=0.117 Sum_probs=222.1
Q ss_pred CeEEEEEcCCCEEEEEEEeCcccCCceeeeecEEEEecccCcceeEEEecCCeEEEEeecCCeEEEEEeeCCCCCCCceE
Q psy7977 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENGTYVS 159 (1225)
Q Consensus 80 ~~~LL~~e~G~Ly~l~l~~d~~~~Gr~~Vs~i~i~~~~tis~~SsL~~L~~g~LFvGS~~GDS~L~~i~~~~ddd~~~l~ 159 (1225)
.-+|..||.|+..++.+... ..+.+|.--...+|+..-.||.+|+.+....=++++....-.+.-.-|.
T Consensus 68 ~lllavdE~g~~~lvs~~~r-----------~Vlh~f~fk~~v~~i~fSPng~~fav~~gn~lqiw~~P~~~~~~~~pFv 136 (893)
T KOG0291|consen 68 TLLLAVDERGRALLVSLLSR-----------SVLHRFNFKRGVGAIKFSPNGKFFAVGCGNLLQIWHAPGEIKNEFNPFV 136 (893)
T ss_pred eEEEEEcCCCcEEEEecccc-----------eeeEEEeecCccceEEECCCCcEEEEEecceeEEEecCcchhcccCcce
Confidence 35677888999988887632 2344443334568899999999999888777777776553211111122
Q ss_pred EEeeeeccccceeeEEeeccccCCccEEEEEec---------------------CCCccEEEEeecceeeEEEEeeCCCc
Q psy7977 160 VMESFTNLAPIIDMVVVDLERQGQGQLVTCSGG---------------------FKEGSLRIIRNGIGIEEHACIDLPGI 218 (1225)
Q Consensus 160 v~d~l~NlgPI~D~~v~d~~~~~~~qLva~sG~---------------------g~~GsLrilR~GI~~~~~~s~eLpgv 218 (1225)
. .=.+.|+--|++-.+-. ...++++..++ |..+.+.----|..-..+-++.-.|.
T Consensus 137 l--~r~~~g~fddi~si~Ws--~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~ 212 (893)
T KOG0291|consen 137 L--HRTYLGHFDDITSIDWS--DDSRLLVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSKDGA 212 (893)
T ss_pred E--eeeecCCccceeEEEec--cCCceEEeccccceEEEEEeccccccceEeccCCCcceEEEEeccCcceEEEEecCce
Confidence 2 22345566666655421 11122221111 11222222222222222333333455
Q ss_pred ceEeEeeeCCCCCCccEEEEEcCCceEEEEEcCceeee---------eccCCcccccCeEEEEeeCCC--eEEEEccCcE
Q psy7977 219 KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEE---------TEMGGFTSDQQTFYCGNVDPR--TVLQVTPSAA 287 (1225)
Q Consensus 219 ~~iWtl~~~~~~~~d~yLVlSf~~~T~Vl~i~ge~veE---------v~~sgF~~~~~TL~ag~l~~~--~iVQVT~~~I 287 (1225)
-.+|+...+....... ==-..+++.. .. .++-|| .....|..+..-+-|+....+ .++-=-.+|+
T Consensus 213 l~~W~~~~~P~~~~~~--~kd~eg~~d~-~~-~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~ 288 (893)
T KOG0291|consen 213 LFVWTCDLRPPELDKA--EKDEEGSDDE-EM-DEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGE 288 (893)
T ss_pred EEEEEecCCCcccccc--cccccccccc-cc-cccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCe
Confidence 5566554322100000 0000000000 00 001111 012234444455666666433 2222224444
Q ss_pred -EEEecCCcceeeeecCCCCCcEEEEEec--CCEEEEE-E-CCeEEEEEeeccc--eeEEeeeccCceeEEEEeccCCCC
Q psy7977 288 -ILISTESKARVSSWEPPNGKSISVVSCN--KNQVLCA-T-GCDVYYLEVHGSE--IKQLAHRALEYEVACLDISPLSNE 360 (1225)
Q Consensus 288 -Rli~~~~~~~i~eW~~p~g~~Iv~As~n--~~~VlVa-s-gg~Lv~feid~~~--L~ev~~~~l~~eIScLai~~~~~~ 360 (1225)
.++.......++.... ...+|..++.| ++++++. + =|+|++.|..... +++..+ -..++|++.++-
T Consensus 289 f~LyelP~f~lih~LSi-s~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH---~~~i~~l~YSpD--- 361 (893)
T KOG0291|consen 289 FGLYELPDFNLIHSLSI-SDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGH---SDRITSLAYSPD--- 361 (893)
T ss_pred eEEEecCCceEEEEeec-ccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeecccc---ccceeeEEECCC---
Confidence 3665544344555443 33579999999 9999997 3 3688888765322 222222 356889998762
Q ss_pred CCCCccccCcEEEEEEecCCeEEEEeCCC-cceE-EeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCc
Q psy7977 361 ETSSEPAKAQLAAVGLWTDISARLLSLPS-LEEV-CKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGR 438 (1225)
Q Consensus 361 ~~~~~~~~s~~laVG~w~d~tv~IlsL~~-Le~v-~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~ 438 (1225)
++++|-|+. ||.|+||+... +-.+ ++++-. -..-+.+.. .+..|+...-||.+-.+.+..
T Consensus 362 --------gq~iaTG~e-DgKVKvWn~~SgfC~vTFteHts---~Vt~v~f~~--~g~~llssSLDGtVRAwDlkR---- 423 (893)
T KOG0291|consen 362 --------GQLIATGAE-DGKVKVWNTQSGFCFVTFTEHTS---GVTAVQFTA--RGNVLLSSSLDGTVRAWDLKR---- 423 (893)
T ss_pred --------CcEEEeccC-CCcEEEEeccCceEEEEeccCCC---ceEEEEEEe--cCCEEEEeecCCeEEeeeecc----
Confidence 578999997 99999999853 3222 223321 111233333 245688888899887776642
Q ss_pred cccce-eeeecCccceEEEEeeCC-ceEEEEecCCcEEE--EEc-CCeeE-EeecccccccccccCCCCCCCCeEEEEe-
Q psy7977 439 LTDKK-KVTLGTQPTVLKTFRSLS-TTNVFACSDRPTVI--YSS-NHKLV-FSNVNLRQVNHMCSLNAESYPDSLALAT- 511 (1225)
Q Consensus 439 Ls~~k-~~~LG~~pV~L~~~~~~g-~~~Vfa~sdrP~li--yss-~g~l~-~~pl~~~~v~~~s~F~se~~p~glv~vs- 511 (1225)
-+. ..+-++.|+++..+.++- ..-|+|-+...+=| ++- .|++. +..=...++.+ -+|+ |.+=.+++
T Consensus 424 --YrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~-l~f~----~~~~~LaS~ 496 (893)
T KOG0291|consen 424 --YRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSG-LSFS----PDGSLLASG 496 (893)
T ss_pred --cceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCccee-eEEc----cccCeEEec
Confidence 112 245678899998876542 23344444444433 232 34432 11111112322 1122 22223443
Q ss_pred --CCeEEEEEEcCCCCeeeEEEeCCCcccEEEEecCCCEEEEEEE
Q psy7977 512 --DSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554 (1225)
Q Consensus 512 --~~~LrI~~i~~~~~l~ir~IpLg~TprrIay~p~s~~~vV~t~ 554 (1225)
++++||=.+-.. .-.+.++++.-.+..++++|..+-++|+|.
T Consensus 497 SWDkTVRiW~if~s-~~~vEtl~i~sdvl~vsfrPdG~elaVaTl 540 (893)
T KOG0291|consen 497 SWDKTVRIWDIFSS-SGTVETLEIRSDVLAVSFRPDGKELAVATL 540 (893)
T ss_pred cccceEEEEEeecc-CceeeeEeeccceeEEEEcCCCCeEEEEEe
Confidence 468988887543 336788999999999999999999999993
No 13
>KOG0306|consensus
Probab=97.58 E-value=0.38 Score=59.88 Aligned_cols=169 Identities=17% Similarity=0.211 Sum_probs=103.6
Q ss_pred EEEEEEECCCCcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeC------Cc-EEEE
Q psy7977 1005 HNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDD------GK-LQQI 1077 (1225)
Q Consensus 1005 s~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~------~k-L~lv 1077 (1225)
+.++++|-.+-..+++++ .-.+++.++.. ..+++ .++-|.| |. .=+++-|++.. +| |++.
T Consensus 434 Gel~vfdlaS~~l~Eti~-AHdgaIWsi~~---~pD~~-g~vT~sa------Dk--tVkfWdf~l~~~~~gt~~k~lsl~ 500 (888)
T KOG0306|consen 434 GELQVFDLASASLVETIR-AHDGAIWSISL---SPDNK-GFVTGSA------DK--TVKFWDFKLVVSVPGTQKKVLSLK 500 (888)
T ss_pred CceEEEEeehhhhhhhhh-ccccceeeeee---cCCCC-ceEEecC------Cc--EEEEEeEEEEeccCcccceeeeec
Confidence 567888877766666655 33566777653 44444 4444443 11 11334444432 13 7777
Q ss_pred EEE--EecCceeeeccc-cCeEEEE--eCCEEEEEEcCCCceeeeeecccceeEEEEEEEECCEEEEeeccccEEEEEEe
Q psy7977 1078 AEK--EIKGACYSMCEF-NGKLLAS--INSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK 1152 (1225)
Q Consensus 1078 ~~~--ev~G~v~al~~f-~G~LLa~--vg~~l~vy~l~~~~~L~~e~~~~~~~i~~~l~~~g~~IlvGD~~kSv~~l~y~ 1152 (1225)
|+. ++..-|.|+.-= +|++||. .+++|.||-+..=|....-..+-.+.+.+.|....++|+-|-+=|+|-+.+-+
T Consensus 501 ~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLd 580 (888)
T KOG0306|consen 501 HTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLD 580 (888)
T ss_pred cceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccc
Confidence 765 456777776633 6888775 89999999997544322112333344456666677899999888888888776
Q ss_pred cCCCeEEEEeccCCCceeEEEEeeeCC-cEEEEcCCCc
Q psy7977 1153 TMEGSFEEISRDYNPNWMTSIEILDDE-LFLGAENSYN 1189 (1225)
Q Consensus 1153 ~~~~~L~~~arD~~~~wvta~~~Ld~d-t~l~aD~~gN 1189 (1225)
-.+=.=..||-| -.|+++.|++.+ .|..+-|++-
T Consensus 581 FGDCHKS~fAHd---DSvm~V~F~P~~~~FFt~gKD~k 615 (888)
T KOG0306|consen 581 FGDCHKSFFAHD---DSVMSVQFLPKTHLFFTCGKDGK 615 (888)
T ss_pred cchhhhhhhccc---CceeEEEEcccceeEEEecCcce
Confidence 655555556633 347788888866 3555555553
No 14
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=96.63 E-value=2.2 Score=50.23 Aligned_cols=288 Identities=17% Similarity=0.228 Sum_probs=158.3
Q ss_pred EEEEeecC--CeEEEEEeeCCCCCCCceEEEeeeeccccceeeEEeeccccCCccEEEEEecC-CCccEEEEeecc---e
Q psy7977 133 VFVGSRLG--DSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGF-KEGSLRIIRNGI---G 206 (1225)
Q Consensus 133 LFvGS~~G--DS~L~~i~~~~ddd~~~l~v~d~l~NlgPI~D~~v~d~~~~~~~qLva~sG~g-~~GsLrilR~GI---~ 206 (1225)
+|+||-.. ...++.+.- |++...+..+........-.-+++ + .....||+++..+ ..|++..++-.= .
T Consensus 2 ~~vgsy~~~~~~gI~~~~~--d~~~g~l~~~~~~~~~~~Ps~l~~-~---~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~ 75 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRF--DEETGTLTLVQTVAEGENPSWLAV-S---PDGRRLYVVNEGSGDSGGVSSYRIDPDTGT 75 (345)
T ss_dssp EEEEECCSSSSTEEEEEEE--ETTTTEEEEEEEEEESSSECCEEE-----TTSSEEEEEETTSSTTTEEEEEEEETTTTE
T ss_pred EEEEcCCCCCCCcEEEEEE--cCCCCCceEeeeecCCCCCceEEE-E---eCCCEEEEEEccccCCCCEEEEEECCCcce
Confidence 67888763 234444433 122234666665543333333333 2 2346788887776 788888887553 4
Q ss_pred eeEEEEeeCCCcceEeEeeeCCCCCCccEEEEE-cCCce-EEEEEcCc-eeeeec---------------------cCCc
Q psy7977 207 IEEHACIDLPGIKGIWALSIGSPKNLDNTLVLS-FVGHT-RVLTLSGA-EVEETE---------------------MGGF 262 (1225)
Q Consensus 207 ~~~~~s~eLpgv~~iWtl~~~~~~~~d~yLVlS-f~~~T-~Vl~i~ge-~veEv~---------------------~sgF 262 (1225)
++.+.+....|..-.| +.. +....||+++ +.+.+ .++.++.+ .+.+.. ...|
T Consensus 76 L~~~~~~~~~g~~p~~-i~~---~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~ 151 (345)
T PF10282_consen 76 LTLLNSVPSGGSSPCH-IAV---DPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVF 151 (345)
T ss_dssp EEEEEEEEESSSCEEE-EEE---CTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE
T ss_pred eEEeeeeccCCCCcEE-EEE---ecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEE
Confidence 5566555544443333 222 2345677765 44444 36777432 232221 0123
Q ss_pred ccccCeEEEEeeCCCeEEEEccCcEEEEecCCcc----eeeeecCCCCCcEEEEEe--cCCEEEEE--ECCeEEEEEee-
Q psy7977 263 TSDQQTFYCGNVDPRTVLQVTPSAAILISTESKA----RVSSWEPPNGKSISVVSC--NKNQVLCA--TGCDVYYLEVH- 333 (1225)
Q Consensus 263 ~~~~~TL~ag~l~~~~iVQVT~~~IRli~~~~~~----~i~eW~~p~g~~Iv~As~--n~~~VlVa--sgg~Lv~feid- 333 (1225)
..++..+++..++.+ .|+.++.+... .......|.|..=.+..+ ++.++.++ .+++|..|+++
T Consensus 152 ~pdg~~v~v~dlG~D--------~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~ 223 (345)
T PF10282_consen 152 SPDGRFVYVPDLGAD--------RVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDP 223 (345)
T ss_dssp -TTSSEEEEEETTTT--------EEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCCEEEEEecCCC--------EEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecc
Confidence 334444454444433 34444443211 122233343332233333 56688777 47899999998
Q ss_pred -ccceeEEeeec-c----C--ceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCC----CcceEEeecCCCC
Q psy7977 334 -GSEIKQLAHRA-L----E--YEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP----SLEEVCKEPLGGE 401 (1225)
Q Consensus 334 -~~~L~ev~~~~-l----~--~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~----~Le~v~~~~L~~~ 401 (1225)
.+.+.++.... + . ...+.|++++ ..+++.|....+++|.+|+++ .|+.+...... .
T Consensus 224 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~isp-----------dg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~-G 291 (345)
T PF10282_consen 224 SDGSLTEIQTISTLPEGFTGENAPAEIAISP-----------DGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTG-G 291 (345)
T ss_dssp TTTEEEEEEEEESCETTSCSSSSEEEEEE-T-----------TSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEES-S
T ss_pred cCCceeEEEEeeeccccccccCCceeEEEec-----------CCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCC-C
Confidence 34566554332 2 1 2456777765 256899998889999999994 24444333332 2
Q ss_pred CCcccEEEEeeCCeeEEEEEE-CCCcEEEEEEcCCCCccccceeeeecCccc
Q psy7977 402 IIPRSILMTCFEGHCYLLVAL-GDGSMFYFSLDPASGRLTDKKKVTLGTQPT 452 (1225)
Q Consensus 402 ~~P~SIll~~l~~~~~LlVGl-~nG~L~~y~ld~~sg~Ls~~k~~~LG~~pV 452 (1225)
..|+.+.+.. ...+|+|+. .++.+..|++|..+|.|.......-...|+
T Consensus 292 ~~Pr~~~~s~--~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ 341 (345)
T PF10282_consen 292 KFPRHFAFSP--DGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPV 341 (345)
T ss_dssp SSEEEEEE-T--TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEE
T ss_pred CCccEEEEeC--CCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCE
Confidence 4699988753 356788777 566788899999999887655444444444
No 15
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=96.56 E-value=1.1 Score=52.68 Aligned_cols=226 Identities=17% Similarity=0.276 Sum_probs=126.6
Q ss_pred EEecCCEEEEE-E----CCeEEEEEeecc--ceeEEeeec-cCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEE
Q psy7977 312 VSCNKNQVLCA-T----GCDVYYLEVHGS--EIKQLAHRA-LEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISAR 383 (1225)
Q Consensus 312 As~n~~~VlVa-s----gg~Lv~feid~~--~L~ev~~~~-l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~ 383 (1225)
.+-.++++.++ . .+.|..|.+++. .|.++.+.. .......+++.+ ...+++++.+.++++.
T Consensus 44 ~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~-----------~g~~l~vany~~g~v~ 112 (345)
T PF10282_consen 44 VSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDP-----------DGRFLYVANYGGGSVS 112 (345)
T ss_dssp E-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECT-----------TSSEEEEEETTTTEEE
T ss_pred EEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEec-----------CCCEEEEEEccCCeEE
Confidence 34455666665 2 368999999864 788877665 455666677754 2578999988899999
Q ss_pred EEeCCC---cceEE-eecC--------C-CCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCccccceee--eec
Q psy7977 384 LLSLPS---LEEVC-KEPL--------G-GEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKV--TLG 448 (1225)
Q Consensus 384 IlsL~~---Le~v~-~~~L--------~-~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~--~LG 448 (1225)
+|.+.+ +.... .... . ...-|+++.+..- ++..+..-++.+.+..|.++..+++|...... -.|
T Consensus 113 v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pd-g~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G 191 (345)
T PF10282_consen 113 VFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPD-GRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPG 191 (345)
T ss_dssp EEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TT-SSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTT
T ss_pred EEEccCCcccceeeeecccCCCCCcccccccccceeEEECCC-CCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccC
Confidence 999974 22211 1100 0 0234556655431 23334457888899999999877667553322 235
Q ss_pred CccceEEEEeeCCceEEEEecCCc-E-EE--EE-cCCeeEEee---ccccccc---ccccCCCCCCCC-eEEEEeC---C
Q psy7977 449 TQPTVLKTFRSLSTTNVFACSDRP-T-VI--YS-SNHKLVFSN---VNLRQVN---HMCSLNAESYPD-SLALATD---S 513 (1225)
Q Consensus 449 ~~pV~L~~~~~~g~~~Vfa~sdrP-~-li--ys-s~g~l~~~p---l~~~~v~---~~s~F~se~~p~-glv~vs~---~ 513 (1225)
.-|-.+. |.. ....+++.++.. . .. +. ..+.+.... ....... ..+.. .-.|+ -++|++. +
T Consensus 192 ~GPRh~~-f~p-dg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i--~ispdg~~lyvsnr~~~ 267 (345)
T PF10282_consen 192 SGPRHLA-FSP-DGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEI--AISPDGRFLYVSNRGSN 267 (345)
T ss_dssp SSEEEEE-E-T-TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEE--EE-TTSSEEEEEECTTT
T ss_pred CCCcEEE-EcC-CcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeE--EEecCCCEEEEEeccCC
Confidence 5554432 221 234455555433 2 22 22 244443221 1111110 11111 11233 3677653 6
Q ss_pred eEEEEEEcCC-CCe-eeEEEeC-CCcccEEEEecCCCEEEEEE
Q psy7977 514 TFTFGTIDEI-QKL-HIRTVPL-GEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 514 ~LrI~~i~~~-~~l-~ir~IpL-g~TprrIay~p~s~~~vV~t 553 (1225)
.+.++.++.. .++ .++.++. |..||.++.+|..+.++|+.
T Consensus 268 sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~ 310 (345)
T PF10282_consen 268 SISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVAN 310 (345)
T ss_dssp EEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEE
T ss_pred EEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEe
Confidence 8999999654 333 4567888 66799999999999999987
No 16
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=96.29 E-value=3.2 Score=48.21 Aligned_cols=124 Identities=19% Similarity=0.247 Sum_probs=76.3
Q ss_pred CCEEEEE-E-CCeEEEEEeec--cceeEEeeec-cC------ceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEE
Q psy7977 316 KNQVLCA-T-GCDVYYLEVHG--SEIKQLAHRA-LE------YEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARL 384 (1225)
Q Consensus 316 ~~~VlVa-s-gg~Lv~feid~--~~L~ev~~~~-l~------~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~I 384 (1225)
+.++.++ . +++|..++++. +.+..+.... ++ ...+.+++.+ ..++++++...+++|.+
T Consensus 186 g~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~p-----------dg~~lyv~~~~~~~I~v 254 (330)
T PRK11028 186 QQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITP-----------DGRHLYACDRTASLISV 254 (330)
T ss_pred CCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECC-----------CCCEEEEecCCCCeEEE
Confidence 4567666 3 68888888874 2444433221 11 1223455543 24688898777899999
Q ss_pred EeCCC----cceEEeecCCCCCCcccEEEEeeCCeeEEEEEEC-CCcEEEEEEcCCCCccccceeeeecCccceE
Q psy7977 385 LSLPS----LEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALG-DGSMFYFSLDPASGRLTDKKKVTLGTQPTVL 454 (1225)
Q Consensus 385 lsL~~----Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~-nG~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L 454 (1225)
|.+.. ++.+..... ...|+.+.+.. +..+|+++-+ +|.+..|+++..+|.|...+....|..|.-+
T Consensus 255 ~~i~~~~~~~~~~~~~~~--~~~p~~~~~~~--dg~~l~va~~~~~~v~v~~~~~~~g~l~~~~~~~~g~~P~~~ 325 (330)
T PRK11028 255 FSVSEDGSVLSFEGHQPT--ETQPRGFNIDH--SGKYLIAAGQKSHHISVYEIDGETGLLTELGRYAVGQGPMWV 325 (330)
T ss_pred EEEeCCCCeEEEeEEEec--cccCCceEECC--CCCEEEEEEccCCcEEEEEEcCCCCcEEEccccccCCCceEE
Confidence 99842 222222222 24677775543 4578888886 8899999999877777555444456666543
No 17
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=96.28 E-value=3.1 Score=48.28 Aligned_cols=228 Identities=12% Similarity=0.135 Sum_probs=124.0
Q ss_pred EEEecCCEEEEE--ECCeEEEEEeec-cceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeC
Q psy7977 311 VVSCNKNQVLCA--TGCDVYYLEVHG-SEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL 387 (1225)
Q Consensus 311 ~As~n~~~VlVa--sgg~Lv~feid~-~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL 387 (1225)
..+-+++++.++ .++.+..|++++ +.+...........++.+++.+ ..++++++.+.++.+.+|.+
T Consensus 41 ~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~-----------~g~~l~v~~~~~~~v~v~~~ 109 (330)
T PRK11028 41 VISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTHISTDH-----------QGRFLFSASYNANCVSVSPL 109 (330)
T ss_pred EECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceEEEECC-----------CCCEEEEEEcCCCeEEEEEE
Confidence 334456677675 467788888874 3566665555555566677654 24678888877999999998
Q ss_pred CCcceE--EeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCccccc--e--eeeecCccceEEEEeeCC
Q psy7977 388 PSLEEV--CKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDK--K--KVTLGTQPTVLKTFRSLS 461 (1225)
Q Consensus 388 ~~Le~v--~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~--k--~~~LG~~pV~L~~~~~~g 461 (1225)
.+-..+ ....++...-|+.+.+.. +++..+...+.+|.+..|.++. .+.+... . ....|..|..+ .+.. +
T Consensus 110 ~~~g~~~~~~~~~~~~~~~~~~~~~p-~g~~l~v~~~~~~~v~v~d~~~-~g~l~~~~~~~~~~~~g~~p~~~-~~~p-d 185 (330)
T PRK11028 110 DKDGIPVAPIQIIEGLEGCHSANIDP-DNRTLWVPCLKEDRIRLFTLSD-DGHLVAQEPAEVTTVEGAGPRHM-VFHP-N 185 (330)
T ss_pred CCCCCCCCceeeccCCCcccEeEeCC-CCCEEEEeeCCCCEEEEEEECC-CCcccccCCCceecCCCCCCceE-EECC-C
Confidence 531111 111122123456665532 2233345677789999999875 4555321 1 12235555433 2222 2
Q ss_pred ceEEEEecC--CcEEEEE-c--CCeeEE-eeccccccccccc-CCC--CCCCC-eEEEEe---CCeEEEEEEcCCC-C-e
Q psy7977 462 TTNVFACSD--RPTVIYS-S--NHKLVF-SNVNLRQVNHMCS-LNA--ESYPD-SLALAT---DSTFTFGTIDEIQ-K-L 526 (1225)
Q Consensus 462 ~~~Vfa~sd--rP~liys-s--~g~l~~-~pl~~~~v~~~s~-F~s--e~~p~-glv~vs---~~~LrI~~i~~~~-~-l 526 (1225)
...+++..+ .-..+|. . .+.+.. ..+..-+-....+ +.. .-.|+ .++|+. .+.+.+..++... . -
T Consensus 186 g~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~ 265 (330)
T PRK11028 186 QQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLS 265 (330)
T ss_pred CCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEE
Confidence 344545433 2223333 2 233322 1111100000000 000 01133 366664 3578888886653 2 3
Q ss_pred eeEEEeCCCcccEEEEecCCCEEEEEE
Q psy7977 527 HIRTVPLGEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 527 ~ir~IpLg~TprrIay~p~s~~~vV~t 553 (1225)
.++.++.+..|+.++++|..+.++++.
T Consensus 266 ~~~~~~~~~~p~~~~~~~dg~~l~va~ 292 (330)
T PRK11028 266 FEGHQPTETQPRGFNIDHSGKYLIAAG 292 (330)
T ss_pred EeEEEeccccCCceEECCCCCEEEEEE
Confidence 477788999999999999999888875
No 18
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=96.28 E-value=0.72 Score=53.66 Aligned_cols=171 Identities=19% Similarity=0.259 Sum_probs=117.1
Q ss_pred EEEEEEECCC-------CcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCc-EEE
Q psy7977 1005 HNLLIIDQNT-------FEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGK-LQQ 1076 (1225)
Q Consensus 1005 s~irlvdp~t-------~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~k-L~l 1076 (1225)
+.|.+++-.. ++.++..++ ...+.|++. | +.++++|. +++|++|++.+.+ |.-
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~~~~--~g~V~ai~~--~----~~~lv~~~-----------g~~l~v~~l~~~~~l~~ 122 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHSTEV--KGPVTAICS--F----NGRLVVAV-----------GNKLYVYDLDNSKTLLK 122 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEEEEE--SS-EEEEEE--E----TTEEEEEE-----------TTEEEEEEEETTSSEEE
T ss_pred cEEEEEEEEcccccceEEEEEEEEee--cCcceEhhh--h----CCEEEEee-----------cCEEEEEEccCcccchh
Confidence 7788888666 345556665 456777754 4 23588886 3589999999877 888
Q ss_pred EEEEEecCceeeeccccCeEEEE-eCCEEEEEEcCCCc-eeeeeecccceeEEEEEEEE--CCEEEEeeccccEEEEEEe
Q psy7977 1077 IAEKEIKGACYSMCEFNGKLLAS-INSTVRLFEWTNEK-ELRLECSHFNNIIALFLKVK--GDFILVGDLMRSLTLLQYK 1152 (1225)
Q Consensus 1077 v~~~ev~G~v~al~~f~G~LLa~-vg~~l~vy~l~~~~-~L~~e~~~~~~~i~~~l~~~--g~~IlvGD~~kSv~~l~y~ 1152 (1225)
....+..-.++++..+++++++| +=+.+.++.|..+. .|..-++++....++.+... ++.+++||....+++++|.
T Consensus 123 ~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 123 KAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp EEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred hheecceEEEEEEeccccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 88888888999999999999988 66889999887643 35422333332224555544 4699999999999999998
Q ss_pred cC------CC-eEEEEeccCCCceeEEE---Eeee----CCc-----EEEEcCCCcEEEEE
Q psy7977 1153 TM------EG-SFEEISRDYNPNWMTSI---EILD----DEL-----FLGAENSYNLFICQ 1194 (1225)
Q Consensus 1153 ~~------~~-~L~~~arD~~~~wvta~---~~Ld----~dt-----~l~aD~~gNl~vl~ 1194 (1225)
++ .. +|...+.=+...-+++. .+.. .+. ++.+=.+|.|.++.
T Consensus 203 ~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l~ 263 (321)
T PF03178_consen 203 PEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVLI 263 (321)
T ss_dssp SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEEE
T ss_pred CCCcccccccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEEE
Confidence 64 23 78888887777778877 4443 122 88888999998553
No 19
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=96.27 E-value=2.1 Score=45.93 Aligned_cols=209 Identities=12% Similarity=0.133 Sum_probs=103.9
Q ss_pred EEEEE-ECCeEEEEEeeccc-eeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEe
Q psy7977 318 QVLCA-TGCDVYYLEVHGSE-IKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCK 395 (1225)
Q Consensus 318 ~VlVa-sgg~Lv~feid~~~-L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~ 395 (1225)
+++.+ .++.+..+++...+ +.+.. .....+.|++..+. ..+++.+.+ ++.+.+|++.+.+.+..
T Consensus 65 ~l~~~~~~~~i~i~~~~~~~~~~~~~--~~~~~i~~~~~~~~-----------~~~~~~~~~-~~~i~~~~~~~~~~~~~ 130 (289)
T cd00200 65 YLASGSSDKTIRLWDLETGECVRTLT--GHTSYVSSVAFSPD-----------GRILSSSSR-DKTIKVWDVETGKCLTT 130 (289)
T ss_pred EEEEEcCCCeEEEEEcCcccceEEEe--ccCCcEEEEEEcCC-----------CCEEEEecC-CCeEEEEECCCcEEEEE
Confidence 56666 57888888877542 22221 22346888887541 356666665 99999999986544332
Q ss_pred ecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCccccceeeeecCccceEEEEeeCCceEEEEec-CCcEE
Q psy7977 396 EPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACS-DRPTV 474 (1225)
Q Consensus 396 ~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~~g~~~Vfa~s-drP~l 474 (1225)
..-. ...+.++.+.. ...+|+.+..+|.+..|.+.. ++... .......++.-..+...+ ..+++++ +.-..
T Consensus 131 ~~~~-~~~i~~~~~~~--~~~~l~~~~~~~~i~i~d~~~--~~~~~--~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~ 202 (289)
T cd00200 131 LRGH-TDWVNSVAFSP--DGTFVASSSQDGTIKLWDLRT--GKCVA--TLTGHTGEVNSVAFSPDG-EKLLSSSSDGTIK 202 (289)
T ss_pred eccC-CCcEEEEEEcC--cCCEEEEEcCCCcEEEEEccc--cccce--eEecCccccceEEECCCc-CEEEEecCCCcEE
Confidence 2110 11223333322 245677777799999988752 21111 111111133322222222 2333433 33334
Q ss_pred EEEcC-CeeEE-eecccccccccccCCCCCCCCeEEEEe-CCeEEEEEEcCCCCeeeEEEe-CCCcccEEEEecCCCEEE
Q psy7977 475 IYSSN-HKLVF-SNVNLRQVNHMCSLNAESYPDSLALAT-DSTFTFGTIDEIQKLHIRTVP-LGEAPRRIAYQESSQTFG 550 (1225)
Q Consensus 475 iyss~-g~l~~-~pl~~~~v~~~s~F~se~~p~glv~vs-~~~LrI~~i~~~~~l~ir~Ip-Lg~TprrIay~p~s~~~v 550 (1225)
+|..+ ++... .......+.+++ |+.. ..-++..+ ++.+++..+.... ..+.++ -...+..++++|..+.++
T Consensus 203 i~d~~~~~~~~~~~~~~~~i~~~~-~~~~--~~~~~~~~~~~~i~i~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~ 277 (289)
T cd00200 203 LWDLSTGKCLGTLRGHENGVNSVA-FSPD--GYLLASGSEDGTIRVWDLRTGE--CVQTLSGHTNSVTSLAWSPDGKRLA 277 (289)
T ss_pred EEECCCCceecchhhcCCceEEEE-EcCC--CcEEEEEcCCCcEEEEEcCCce--eEEEccccCCcEEEEEECCCCCEEE
Confidence 44322 21111 101111222222 2211 23344444 6788888876532 223333 234678899999888777
Q ss_pred EEE
Q psy7977 551 VIT 553 (1225)
Q Consensus 551 V~t 553 (1225)
.+.
T Consensus 278 ~~~ 280 (289)
T cd00200 278 SGS 280 (289)
T ss_pred Eec
Confidence 765
No 20
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=96.21 E-value=2.3 Score=45.71 Aligned_cols=257 Identities=13% Similarity=0.127 Sum_probs=129.4
Q ss_pred CeEEEEEcCCCEEEEEEEeCcccCCceeeeecEEEEecccCcceeEEEecCC-eEEEEeecCCeEEEEEeeCCCCCCCce
Q psy7977 80 ERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNG-VVFVGSRLGDSQLVKLNRSPDENGTYV 158 (1225)
Q Consensus 80 ~~~LL~~e~G~Ly~l~l~~d~~~~Gr~~Vs~i~i~~~~tis~~SsL~~L~~g-~LFvGS~~GDS~L~~i~~~~ddd~~~l 158 (1225)
..++.+..+|.++...+... . ....+. +......++....++ ++++++..|.=.++.+...
T Consensus 22 ~~l~~~~~~g~i~i~~~~~~-----~-~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~-------- 83 (289)
T cd00200 22 KLLATGSGDGTIKVWDLETG-----E-LLRTLK----GHTGPVRDVAASADGTYLASGSSDKTIRLWDLETG-------- 83 (289)
T ss_pred CEEEEeecCcEEEEEEeeCC-----C-cEEEEe----cCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcc--------
Confidence 45666777898888776532 1 111111 111122456666665 7888887655555554431
Q ss_pred EEEeeeec-cccceeeEEeeccccCCccEEEEEecCCCccEEEEeecceeeEEEEeeCCCcceEeEeeeCCCCCCccEEE
Q psy7977 159 SVMESFTN-LAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLV 237 (1225)
Q Consensus 159 ~v~d~l~N-lgPI~D~~v~d~~~~~~~qLva~sG~g~~GsLrilR~GI~~~~~~s~eLpgv~~iWtl~~~~~~~~d~yLV 237 (1225)
+.+..+.. -++|..+.... ..+++++++ .+|.+++..-.- .+....+. ..-..+..+.... ...+++
T Consensus 84 ~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~--~~~~i~~~~~~~-~~~~~~~~-~~~~~i~~~~~~~---~~~~l~ 151 (289)
T cd00200 84 ECVRTLTGHTSYVSSVAFSP-----DGRILSSSS--RDKTIKVWDVET-GKCLTTLR-GHTDWVNSVAFSP---DGTFVA 151 (289)
T ss_pred cceEEEeccCCcEEEEEEcC-----CCCEEEEec--CCCeEEEEECCC-cEEEEEec-cCCCcEEEEEEcC---cCCEEE
Confidence 12223333 23677776643 245666655 567787776531 11222222 1112344444332 145666
Q ss_pred EEc-CCceEEEEEc-CceeeeeccCCcccccCeEEEEee-CCC-eEEEEc-cCcEEEEecCCcceeeeecCCCCCcEEEE
Q psy7977 238 LSF-VGHTRVLTLS-GAEVEETEMGGFTSDQQTFYCGNV-DPR-TVLQVT-PSAAILISTESKARVSSWEPPNGKSISVV 312 (1225)
Q Consensus 238 lSf-~~~T~Vl~i~-ge~veEv~~sgF~~~~~TL~ag~l-~~~-~iVQVT-~~~IRli~~~~~~~i~eW~~p~g~~Iv~A 312 (1225)
.+. .+.-.++.+. ++.+..... ....+.+-.+ .++ .++=.. ...|++++...++.+..+.... ..|...
T Consensus 152 ~~~~~~~i~i~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~-~~i~~~ 225 (289)
T cd00200 152 SSSQDGTIKLWDLRTGKCVATLTG-----HTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHE-NGVNSV 225 (289)
T ss_pred EEcCCCcEEEEEccccccceeEec-----CccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcC-CceEEE
Confidence 665 3333455543 121222211 1111111112 122 222222 4557777766545555553322 256666
Q ss_pred EecC-CEEEEE-E-CCeEEEEEeecccee-EEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEe
Q psy7977 313 SCNK-NQVLCA-T-GCDVYYLEVHGSEIK-QLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLS 386 (1225)
Q Consensus 313 s~n~-~~VlVa-s-gg~Lv~feid~~~L~-ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~Ils 386 (1225)
+... ..++++ + ++.+..+++...+.. ... .....+.+++..+. ..+++.+.. |+.+++|+
T Consensus 226 ~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~--~~~~~i~~~~~~~~-----------~~~l~~~~~-d~~i~iw~ 289 (289)
T cd00200 226 AFSPDGYLLASGSEDGTIRVWDLRTGECVQTLS--GHTNSVTSLAWSPD-----------GKRLASGSA-DGTIRIWD 289 (289)
T ss_pred EEcCCCcEEEEEcCCCcEEEEEcCCceeEEEcc--ccCCcEEEEEECCC-----------CCEEEEecC-CCeEEecC
Confidence 6664 455555 4 899999988754322 221 23456888887542 457888877 99999874
No 21
>KOG0318|consensus
Probab=95.99 E-value=5.7 Score=48.29 Aligned_cols=262 Identities=13% Similarity=0.161 Sum_probs=148.8
Q ss_pred eEEEEeeC-CC-eEEEEcc-CcEEEEecCCcceeeeecCCCC---CcEEEEEecCCEEEEEECCeEEEEEeeccceeEEe
Q psy7977 268 TFYCGNVD-PR-TVLQVTP-SAAILISTESKARVSSWEPPNG---KSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLA 341 (1225)
Q Consensus 268 TL~ag~l~-~~-~iVQVT~-~~IRli~~~~~~~i~eW~~p~g---~~Iv~As~n~~~VlVasgg~Lv~feid~~~L~ev~ 341 (1225)
.|+|=... ++ +++-+.. +.+++.+-.....+.+|..+.. +.+-+.--++..|-|+.+|.|-||+.+..+ ....
T Consensus 237 sIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~-~~~~ 315 (603)
T KOG0318|consen 237 SIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPS-VLKV 315 (603)
T ss_pred cEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCC-hhhe
Confidence 34444442 43 6766653 5688887766678888875432 222222234444444578999999877544 1111
Q ss_pred eeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEE-EEeeCCeeEEEE
Q psy7977 342 HRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSIL-MTCFEGHCYLLV 420 (1225)
Q Consensus 342 ~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIl-l~~l~~~~~LlV 420 (1225)
..--.+.|+||++.+- ..++.=|.. ||.|.=|....... ..+.+..--..|. ++.-+...+..+
T Consensus 316 i~GHnK~ITaLtv~~d-----------~~~i~Sgsy-DG~I~~W~~~~g~~---~~~~g~~h~nqI~~~~~~~~~~~~t~ 380 (603)
T KOG0318|consen 316 ISGHNKSITALTVSPD-----------GKTIYSGSY-DGHINSWDSGSGTS---DRLAGKGHTNQIKGMAASESGELFTI 380 (603)
T ss_pred ecccccceeEEEEcCC-----------CCEEEeecc-CceEEEEecCCccc---cccccccccceEEEEeecCCCcEEEE
Confidence 2223467899998752 367888887 99988888753211 1110000001111 111122345556
Q ss_pred EECCCcEEEEEEcCCCCccccceeeeecCccceEEEEeeCCceEEEEecCCcEEEEEcCCeeEEeecccccccccccCCC
Q psy7977 421 ALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA 500 (1225)
Q Consensus 421 Gl~nG~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~~g~~~Vfa~sdrP~liyss~g~l~~~pl~~~~v~~~s~F~s 500 (1225)
|+.| .|-+..+. .+.........||.+|.-+.... +....++.+..-.+++.+.+++.-.|+.++.-- ..++.
T Consensus 381 g~Dd-~l~~~~~~--~~~~t~~~~~~lg~QP~~lav~~--d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~--vAv~~ 453 (603)
T KOG0318|consen 381 GWDD-TLRVISLK--DNGYTKSEVVKLGSQPKGLAVLS--DGGTAVVACISDIVLLQDQTKVSSIPIGYESSA--VAVSP 453 (603)
T ss_pred ecCC-eEEEEecc--cCcccccceeecCCCceeEEEcC--CCCEEEEEecCcEEEEecCCcceeeccccccce--EEEcC
Confidence 6644 33333221 12233334467999999776543 223455556666677777777777777665321 11211
Q ss_pred CCCCCeEEEEeCCeEEEEEEcCCC-CeeeEEEeCCCcccEEEEecCCCEEEEEE
Q psy7977 501 ESYPDSLALATDSTFTFGTIDEIQ-KLHIRTVPLGEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 501 e~~p~glv~vs~~~LrI~~i~~~~-~l~ir~IpLg~TprrIay~p~s~~~vV~t 553 (1225)
+. .+-.|.-.++.++|.++.... .--.+.++....+..|+|+|...+++++-
T Consensus 454 ~~-~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~D 506 (603)
T KOG0318|consen 454 DG-SEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGD 506 (603)
T ss_pred CC-CEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEec
Confidence 11 112333356789999998765 33457788899999999999999887764
No 22
>KOG2048|consensus
Probab=95.99 E-value=6.6 Score=49.01 Aligned_cols=177 Identities=16% Similarity=0.191 Sum_probs=91.4
Q ss_pred CcEEEEecCCcceeeeecC----------CCCCcEEEEEecC--CEEEEE-ECCeEEEEEeeccceeEEeeec-cCceeE
Q psy7977 285 SAAILISTESKARVSSWEP----------PNGKSISVVSCNK--NQVLCA-TGCDVYYLEVHGSEIKQLAHRA-LEYEVA 350 (1225)
Q Consensus 285 ~~IRli~~~~~~~i~eW~~----------p~g~~Iv~As~n~--~~VlVa-sgg~Lv~feid~~~L~ev~~~~-l~~eIS 350 (1225)
.+-||+.......+.||+. +.|..|=++++++ ..++|. ++|.+.+|.+.++.+.-..... ....+-
T Consensus 79 e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvL 158 (691)
T KOG2048|consen 79 EGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVL 158 (691)
T ss_pred cCCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEE
Confidence 4556665554456777764 2344566777774 456665 6777777777655443322111 124566
Q ss_pred EEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEE--eecCCCCCCcccEEEEee--CCeeEEEEEECCCc
Q psy7977 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVC--KEPLGGEIIPRSILMTCF--EGHCYLLVALGDGS 426 (1225)
Q Consensus 351 cLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~--~~~L~~~~~P~SIll~~l--~~~~~LlVGl~nG~ 426 (1225)
|++..+. ..-++.|+- ||.|++++...-..++ ...++...--+.+++-.+ -....|..|=..|.
T Consensus 159 slsw~~~-----------~~~i~~Gs~-Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~ 226 (691)
T KOG2048|consen 159 SLSWNPT-----------GTKIAGGSI-DGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGT 226 (691)
T ss_pred EEEecCC-----------ccEEEeccc-CceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCce
Confidence 7776442 344888887 9999999997533333 223321111122222111 02234556666666
Q ss_pred EEEEEEcCCCCccccceeeeecCccceEEEEe-eCCceEEEEecCCcEEE-EEcC
Q psy7977 427 MFYFSLDPASGRLTDKKKVTLGTQPTVLKTFR-SLSTTNVFACSDRPTVI-YSSN 479 (1225)
Q Consensus 427 L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~-~~g~~~Vfa~sdrP~li-yss~ 479 (1225)
+..+ |+..|+|.+.-.... .....+. .+....||+.|-.|-++ |+..
T Consensus 227 V~FW--d~~~gTLiqS~~~h~----adVl~Lav~~~~d~vfsaGvd~~ii~~~~~ 275 (691)
T KOG2048|consen 227 VTFW--DSIFGTLIQSHSCHD----ADVLALAVADNEDRVFSAGVDPKIIQYSLT 275 (691)
T ss_pred EEEE--cccCcchhhhhhhhh----cceeEEEEcCCCCeEEEccCCCceEEEEec
Confidence 6544 445565543211110 0111222 23447788888666444 5543
No 23
>KOG2110|consensus
Probab=95.75 E-value=2.3 Score=49.54 Aligned_cols=230 Identities=15% Similarity=0.191 Sum_probs=136.5
Q ss_pred eEEEEeeCCCeEEEEccCcEEEEecCCccee---eeecCCCCCcEEEEEecCC--EEEEE---ECCeEEEEEeeccceeE
Q psy7977 268 TFYCGNVDPRTVLQVTPSAAILISTESKARV---SSWEPPNGKSISVVSCNKN--QVLCA---TGCDVYYLEVHGSEIKQ 339 (1225)
Q Consensus 268 TL~ag~l~~~~iVQVT~~~IRli~~~~~~~i---~eW~~p~g~~Iv~As~n~~--~VlVa---sgg~Lv~feid~~~L~e 339 (1225)
.|.+-.|..+|+|=+.+..|.+++....+.+ ..|. |..+..-+-+.|.. |++.- +.|++++|... ++..
T Consensus 89 ~IL~VrmNr~RLvV~Lee~IyIydI~~MklLhTI~t~~-~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~--nl~~ 165 (391)
T KOG2110|consen 89 SILAVRMNRKRLVVCLEESIYIYDIKDMKLLHTIETTP-PNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTI--NLQP 165 (391)
T ss_pred ceEEEEEccceEEEEEcccEEEEecccceeehhhhccC-CCccceEeeccCCCCceEEecCCCCCceEEEEEcc--ccee
Confidence 5777778888999999999999998765444 4553 34444555555544 67662 57999999876 3444
Q ss_pred Eeeec-cCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeC-CeeE
Q psy7977 340 LAHRA-LEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-GHCY 417 (1225)
Q Consensus 340 v~~~~-l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~-~~~~ 417 (1225)
+.... -+..++||++.+ ....+|-+..+.--||+|+.|+-+.++.-.= ...|.+|.-..+. ...|
T Consensus 166 v~~I~aH~~~lAalafs~-----------~G~llATASeKGTVIRVf~v~~G~kl~eFRR--G~~~~~IySL~Fs~ds~~ 232 (391)
T KOG2110|consen 166 VNTINAHKGPLAALAFSP-----------DGTLLATASEKGTVIRVFSVPEGQKLYEFRR--GTYPVSIYSLSFSPDSQF 232 (391)
T ss_pred eeEEEecCCceeEEEECC-----------CCCEEEEeccCceEEEEEEcCCccEeeeeeC--CceeeEEEEEEECCCCCe
Confidence 44332 357899999975 2567888887333589999998666654222 1235444433343 5689
Q ss_pred EEEEECCCcEEEEEEcCCCCccccceeeeecCccceEEEEeeCCceEEEEecCCcEEE---EEcCCeeEEeecccccccc
Q psy7977 418 LLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVI---YSSNHKLVFSNVNLRQVNH 494 (1225)
Q Consensus 418 LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~~g~~~Vfa~sdrP~li---yss~g~l~~~pl~~~~v~~ 494 (1225)
|-+.-.++.+..|+++....+-.+. ....+. .+.++. --+++--|.=+ ......+-+..++.....+
T Consensus 233 L~~sS~TeTVHiFKL~~~~~~~~~~-p~~~~~---~~~~~s------k~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~ 302 (391)
T KOG2110|consen 233 LAASSNTETVHIFKLEKVSNNPPES-PTAGTS---WFGKVS------KAATSYLPSQVSSVLDQSRKFATAKLPESGRKN 302 (391)
T ss_pred EEEecCCCeEEEEEecccccCCCCC-CCCCCc---ccchhh------hhhhhhcchhhhhhhhhccceeEEEccCCCccc
Confidence 9999999999999998643110000 000000 000000 00000001000 0112235555666666667
Q ss_pred cccCCCCCC-CCeEEEEeCCeEEEEEEcCC
Q psy7977 495 MCSLNAESY-PDSLALATDSTFTFGTIDEI 523 (1225)
Q Consensus 495 ~s~F~se~~-p~glv~vs~~~LrI~~i~~~ 523 (1225)
.|.|.+.+. |.-.++..++.+-+.+++..
T Consensus 303 ~~~l~~~~~~~~v~vas~dG~~y~y~l~~~ 332 (391)
T KOG2110|consen 303 ICSLSSIQKIPRVLVASYDGHLYSYRLPPK 332 (391)
T ss_pred eEEeeccCCCCEEEEEEcCCeEEEEEcCCC
Confidence 788776443 44555566788888888875
No 24
>KOG0647|consensus
Probab=95.53 E-value=0.38 Score=54.43 Aligned_cols=186 Identities=13% Similarity=0.178 Sum_probs=109.0
Q ss_pred CceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCC---cceEEeecCCCCCCcccEEEEeeCCeeEEEEEE
Q psy7977 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS---LEEVCKEPLGGEIIPRSILMTCFEGHCYLLVAL 422 (1225)
Q Consensus 346 ~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~---Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl 422 (1225)
++.||+|+++|. ...+++.|.| ||+||+|.+.. +..-.++.++ .++=+++-. .+...++.|-
T Consensus 27 ~DsIS~l~FSP~----------~~~~~~A~SW-D~tVR~wevq~~g~~~~ka~~~~~--~PvL~v~Ws--ddgskVf~g~ 91 (347)
T KOG0647|consen 27 EDSISALAFSPQ----------ADNLLAAGSW-DGTVRIWEVQNSGQLVPKAQQSHD--GPVLDVCWS--DDGSKVFSGG 91 (347)
T ss_pred ccchheeEeccc----------cCceEEeccc-CCceEEEEEecCCcccchhhhccC--CCeEEEEEc--cCCceEEeec
Confidence 467899999873 3567889999 99999999964 2222223332 222222222 3457789999
Q ss_pred CCCcEEEEEEcCCCCccccceeeeecCccceEEEEeeCCceEEEEecCCc-EEEEEc-CCeeEEeecccccccccccCCC
Q psy7977 423 GDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRP-TVIYSS-NHKLVFSNVNLRQVNHMCSLNA 500 (1225)
Q Consensus 423 ~nG~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~~g~~~Vfa~sdrP-~liyss-~g~l~~~pl~~~~v~~~s~F~s 500 (1225)
.||.+-.+.+.. ++.. ..-+=..||+-..+-.+...-.+++|+== .|=|.. +..-.+..+...+-.+.+.
T Consensus 92 ~Dk~~k~wDL~S--~Q~~---~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~D--- 163 (347)
T KOG0647|consen 92 CDKQAKLWDLAS--GQVS---QVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAAD--- 163 (347)
T ss_pred cCCceEEEEccC--CCee---eeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehh---
Confidence 999998887753 4432 22333467776655333234466776421 233331 1111111111111111111
Q ss_pred CCCCCeEEEEeCCeEEEEEEcCCC-CeeeEEEeCCCcccEEEEecCCCEEEEEEE
Q psy7977 501 ESYPDSLALATDSTFTFGTIDEIQ-KLHIRTVPLGEAPRRIAYQESSQTFGVITT 554 (1225)
Q Consensus 501 e~~p~glv~vs~~~LrI~~i~~~~-~l~ir~IpLg~TprrIay~p~s~~~vV~t~ 554 (1225)
-..|-.+|...+..+.+..+..-. .+.--.=||..+.|.|+-++....|+++.+
T Consensus 164 v~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsi 218 (347)
T KOG0647|consen 164 VLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSI 218 (347)
T ss_pred ccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeee
Confidence 123456667778899999995532 344444579999999999999999999873
No 25
>KOG2055|consensus
Probab=95.46 E-value=0.95 Score=53.85 Aligned_cols=169 Identities=16% Similarity=0.211 Sum_probs=96.9
Q ss_pred CcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCccccceeeeec
Q psy7977 369 AQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLG 448 (1225)
Q Consensus 369 s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~LG 448 (1225)
++|+++... .|.|+++...+.+.+.+-.+. ...+++++. ..+-.|++.-++|.+..+.+..... -+|..-=|
T Consensus 315 ~~fia~~G~-~G~I~lLhakT~eli~s~Kie--G~v~~~~fs--Sdsk~l~~~~~~GeV~v~nl~~~~~---~~rf~D~G 386 (514)
T KOG2055|consen 315 SNFIAIAGN-NGHIHLLHAKTKELITSFKIE--GVVSDFTFS--SDSKELLASGGTGEVYVWNLRQNSC---LHRFVDDG 386 (514)
T ss_pred CCeEEEccc-CceEEeehhhhhhhhheeeec--cEEeeEEEe--cCCcEEEEEcCCceEEEEecCCcce---EEEEeecC
Confidence 568888776 899999888776666554453 334455554 2346678888899998887764211 01111011
Q ss_pred C-ccceEEEEeeCCceEEEEecCCcEEE--EEcCCeeEEeecccccccccc---------cCCCCCCCCeEEEEe---CC
Q psy7977 449 T-QPTVLKTFRSLSTTNVFACSDRPTVI--YSSNHKLVFSNVNLRQVNHMC---------SLNAESYPDSLALAT---DS 513 (1225)
Q Consensus 449 ~-~pV~L~~~~~~g~~~Vfa~sdrP~li--yss~g~l~~~pl~~~~v~~~s---------~F~se~~p~glv~vs---~~ 513 (1225)
. .--.+.+- .+ ...||+|+..=++ |..++ .+..-+.+++..+. .|+..+ +-+++++ .+
T Consensus 387 ~v~gts~~~S-~n--g~ylA~GS~~GiVNIYd~~s--~~~s~~PkPik~~dNLtt~Itsl~Fn~d~--qiLAiaS~~~kn 459 (514)
T KOG2055|consen 387 SVHGTSLCIS-LN--GSYLATGSDSGIVNIYDGNS--CFASTNPKPIKTVDNLTTAITSLQFNHDA--QILAIASRVKKN 459 (514)
T ss_pred ccceeeeeec-CC--CceEEeccCcceEEEeccch--hhccCCCCchhhhhhhheeeeeeeeCcch--hhhhhhhhcccc
Confidence 1 11111111 11 2378888877554 44222 12212222222222 233221 2233333 47
Q ss_pred eEEEEEEcCCC---CeeeEEEeCCCcccEEEEecCCCEEEEEE
Q psy7977 514 TFTFGTIDEIQ---KLHIRTVPLGEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 514 ~LrI~~i~~~~---~l~ir~IpLg~TprrIay~p~s~~~vV~t 553 (1225)
.||+..+|... .|+.+--|++. +|.++|+|.++.++|+.
T Consensus 460 alrLVHvPS~TVFsNfP~~n~~vg~-vtc~aFSP~sG~lAvGN 501 (514)
T KOG2055|consen 460 ALRLVHVPSCTVFSNFPTSNTKVGH-VTCMAFSPNSGYLAVGN 501 (514)
T ss_pred ceEEEeccceeeeccCCCCCCcccc-eEEEEecCCCceEEeec
Confidence 99999999874 68887666664 79999999999999997
No 26
>KOG0283|consensus
Probab=95.17 E-value=2.2 Score=53.99 Aligned_cols=208 Identities=15% Similarity=0.168 Sum_probs=123.8
Q ss_pred ccEEEEeecceeeEEEEe----eCCCc--ceEeEeeeCCCCCCccEEEEEcCCce-EEEEEcCceeeeeccCCcccccCe
Q psy7977 196 GSLRIIRNGIGIEEHACI----DLPGI--KGIWALSIGSPKNLDNTLVLSFVGHT-RVLTLSGAEVEETEMGGFTSDQQT 268 (1225)
Q Consensus 196 GsLrilR~GI~~~~~~s~----eLpgv--~~iWtl~~~~~~~~d~yLVlSf~~~T-~Vl~i~ge~veEv~~sgF~~~~~T 268 (1225)
...++-..+..+.++..+ ++++. -+||++|.+. -.+||...-.+.- +|.++..++.+.+....+..
T Consensus 239 ~rvkv~~~~K~~kelsal~~~Qe~~~ah~gaIw~mKFS~---DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~---- 311 (712)
T KOG0283|consen 239 SRVKVRHYKKSPKELSALTVVQEISNAHKGAIWAMKFSH---DGKYLASAGEDGVIRVWKVIESERMRVAEGDSSC---- 311 (712)
T ss_pred ceEEecccCCCcccceeeEEeeccccccCCcEEEEEeCC---CCceeeecCCCceEEEEEEeccchhcccccccch----
Confidence 455666667777777665 45533 4899999865 3578888766654 58887554444432221110
Q ss_pred EEEEeeCCCeEEEEccCc-------------------------EEEEecCCcceeeeecCCCCCcEEEEEecCCEEEEE-
Q psy7977 269 FYCGNVDPRTVLQVTPSA-------------------------AILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA- 322 (1225)
Q Consensus 269 L~ag~l~~~~iVQVT~~~-------------------------IRli~~~~~~~i~eW~~p~g~~Iv~As~n~~~VlVa- 322 (1225)
++.+.-.++.+-+++... -.+.. +.+.+.+. .-..|...+-..++.||+
T Consensus 312 ~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~~~~~p~~~f~f~e----kP~~ef~G-Ht~DILDlSWSKn~fLLSS 386 (712)
T KOG0283|consen 312 MYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSPCVLLPLKAFVFSE----KPFCEFKG-HTADILDLSWSKNNFLLSS 386 (712)
T ss_pred hhhhhhhccccCccccccccccccccccccccCCccccCCCccccccc----cchhhhhc-cchhheecccccCCeeEec
Confidence 000000111222222222 11100 12222221 112477788888888886
Q ss_pred -ECCeEEEEEeecc-ceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCC
Q psy7977 323 -TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGG 400 (1225)
Q Consensus 323 -sgg~Lv~feid~~-~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~ 400 (1225)
-+.++-+-++... -|.-..+ .+-|+|+++.|+. .+|++=|+- |+.+|||++++-+.+.=..+.
T Consensus 387 SMDKTVRLWh~~~~~CL~~F~H---ndfVTcVaFnPvD----------DryFiSGSL-D~KvRiWsI~d~~Vv~W~Dl~- 451 (712)
T KOG0283|consen 387 SMDKTVRLWHPGRKECLKVFSH---NDFVTCVAFNPVD----------DRYFISGSL-DGKVRLWSISDKKVVDWNDLR- 451 (712)
T ss_pred cccccEEeecCCCcceeeEEec---CCeeEEEEecccC----------CCcEeeccc-ccceEEeecCcCeeEeehhhh-
Confidence 3777777666533 2333222 4569999998863 468889997 999999999987766544442
Q ss_pred CCCcccEEEEeeCCeeEEEEEECCCcEEEEEEc
Q psy7977 401 EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLD 433 (1225)
Q Consensus 401 ~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld 433 (1225)
-+..++|+.. ++-+.+||+-+|....|...
T Consensus 452 -~lITAvcy~P--dGk~avIGt~~G~C~fY~t~ 481 (712)
T KOG0283|consen 452 -DLITAVCYSP--DGKGAVIGTFNGYCRFYDTE 481 (712)
T ss_pred -hhheeEEecc--CCceEEEEEeccEEEEEEcc
Confidence 2334566654 45789999999999999764
No 27
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=95.14 E-value=9.7 Score=45.29 Aligned_cols=235 Identities=12% Similarity=0.086 Sum_probs=120.0
Q ss_pred CcEEEEecCCcceeeeecCCCCCcEEEEEecCCEEEEE-E---------C-CeEEEEEeeccceeEEeeeccCcee----
Q psy7977 285 SAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-T---------G-CDVYYLEVHGSEIKQLAHRALEYEV---- 349 (1225)
Q Consensus 285 ~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n~~~VlVa-s---------g-g~Lv~feid~~~L~ev~~~~l~~eI---- 349 (1225)
+.|.++|.++.+.+..+......+. ..|-.+..+.++ + + +.|..+... .++++.+.+++...
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~~-~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~--t~~~~~~i~~p~~p~~~~ 103 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPNP-VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQ--THLPIADIELPEGPRFLV 103 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCce-eECCCCCEEEEEeccccccccCCCCCEEEEEECc--cCcEEeEEccCCCchhhc
Confidence 5688888877666666654322222 255556677776 4 2 334444333 44444444443221
Q ss_pred ----EEEEeccCCCCCCCCccccCcEEEEEEec-CCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECC
Q psy7977 350 ----ACLDISPLSNEETSSEPAKAQLAAVGLWT-DISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGD 424 (1225)
Q Consensus 350 ----ScLai~~~~~~~~~~~~~~s~~laVG~w~-d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~n 424 (1225)
.-+++++ ..+++.|.-+. +++|.++.+..-+.+.....+. ...++..-+...+. ...|
T Consensus 104 ~~~~~~~~ls~-----------dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~----~~~vy~t~e~~~~~--~~~D 166 (352)
T TIGR02658 104 GTYPWMTSLTP-----------DNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD----CYHIFPTANDTFFM--HCRD 166 (352)
T ss_pred cCccceEEECC-----------CCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC----CcEEEEecCCccEE--Eeec
Confidence 1233332 24688888776 8899999998766666555531 12222222233443 4479
Q ss_pred CcEEEEEEcCCCCccccceee-eec------CccceEEEEeeCCceEEEEecCCcEEEEEcCCeeEEeeccccccccccc
Q psy7977 425 GSMFYFSLDPASGRLTDKKKV-TLG------TQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCS 497 (1225)
Q Consensus 425 G~L~~y~ld~~sg~Ls~~k~~-~LG------~~pV~L~~~~~~g~~~Vfa~sdrP~liyss~g~l~~~pl~~~~v~~~s~ 497 (1225)
|.+..+.++.. |+...+... +-+ .+| . +...+...+|+..+ |.+....++...+....+
T Consensus 167 g~~~~v~~d~~-g~~~~~~~~vf~~~~~~v~~rP-~---~~~~dg~~~~vs~e---------G~V~~id~~~~~~~~~~~ 232 (352)
T TIGR02658 167 GSLAKVGYGTK-GNPKIKPTEVFHPEDEYLINHP-A---YSNKSGRLVWPTYT---------GKIFQIDLSSGDAKFLPA 232 (352)
T ss_pred CceEEEEecCC-CceEEeeeeeecCCccccccCC-c---eEcCCCcEEEEecC---------CeEEEEecCCCcceecce
Confidence 99999988854 443211111 112 444 1 11111233333333 444443332222222222
Q ss_pred CCC---C----C-CCC-----------eEEEE-e-C--------CeEEEEEEcCCCCeeeEEEeCCCcccEEEEecCCC-
Q psy7977 498 LNA---E----S-YPD-----------SLALA-T-D--------STFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQ- 547 (1225)
Q Consensus 498 F~s---e----~-~p~-----------glv~v-s-~--------~~LrI~~i~~~~~l~ir~IpLg~TprrIay~p~s~- 547 (1225)
+.. + . -|. +.+|+ . + ..=.+.-+|....-.+++|++|.-|..|+++|..+
T Consensus 233 ~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp 312 (352)
T TIGR02658 233 IEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKP 312 (352)
T ss_pred eeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCe
Confidence 211 0 0 111 22332 1 0 11245555555667889999999999999999999
Q ss_pred EEEEEE
Q psy7977 548 TFGVIT 553 (1225)
Q Consensus 548 ~~vV~t 553 (1225)
.+++..
T Consensus 313 ~lyvtn 318 (352)
T TIGR02658 313 LLYALS 318 (352)
T ss_pred EEEEeC
Confidence 555443
No 28
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=95.06 E-value=0.33 Score=58.39 Aligned_cols=77 Identities=21% Similarity=0.261 Sum_probs=55.3
Q ss_pred CceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCC-------CCCcccEEEEee--C---
Q psy7977 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGG-------EIIPRSILMTCF--E--- 413 (1225)
Q Consensus 346 ~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~-------~~~P~SIll~~l--~--- 413 (1225)
..+|+|++.+.+ .|+|||.. +|++.|+++..-..++.+.+.. ...+.++.+.-+ +
T Consensus 86 ~g~vtal~~S~i------------GFvaigy~-~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ 152 (395)
T PF08596_consen 86 QGPVTALKNSDI------------GFVAIGYE-SGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDG 152 (395)
T ss_dssp S-SEEEEEE-BT------------SEEEEEET-TSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSS
T ss_pred CCcEeEEecCCC------------cEEEEEec-CCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCc
Confidence 478888888654 59999996 9999999998777787765532 123345555433 2
Q ss_pred -CeeEEEEEECCCcEEEEEEcCC
Q psy7977 414 -GHCYLLVALGDGSMFYFSLDPA 435 (1225)
Q Consensus 414 -~~~~LlVGl~nG~L~~y~ld~~ 435 (1225)
..+.|+||+..|.++.|++.+.
T Consensus 153 ySSi~L~vGTn~G~v~~fkIlp~ 175 (395)
T PF08596_consen 153 YSSICLLVGTNSGNVLTFKILPS 175 (395)
T ss_dssp SEEEEEEEEETTSEEEEEEEEE-
T ss_pred ccceEEEEEeCCCCEEEEEEecC
Confidence 3699999999999999999763
No 29
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=94.95 E-value=11 Score=44.80 Aligned_cols=125 Identities=17% Similarity=0.178 Sum_probs=73.2
Q ss_pred CcEEEEecCCcceeeeecCCCCCcEEEEEecCCEEEEE-ECCeEEEEEeeccceeEEeeeccCce-eEEEEeccCCCCCC
Q psy7977 285 SAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYE-VACLDISPLSNEET 362 (1225)
Q Consensus 285 ~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n~~~VlVa-sgg~Lv~feid~~~L~ev~~~~l~~e-IScLai~~~~~~~~ 362 (1225)
..++.++..+++.+ |..+.+ .....+..+.+|.+. .++.++.++.+.+++.- +...+... .+...+
T Consensus 251 g~l~a~d~~tG~~~--W~~~~~-~~~~p~~~~~~vyv~~~~G~l~~~d~~tG~~~W-~~~~~~~~~~ssp~i-------- 318 (377)
T TIGR03300 251 GRVAALDLRSGRVL--WKRDAS-SYQGPAVDDNRLYVTDADGVVVALDRRSGSELW-KNDELKYRQLTAPAV-------- 318 (377)
T ss_pred CEEEEEECCCCcEE--EeeccC-CccCceEeCCEEEEECCCCeEEEEECCCCcEEE-ccccccCCccccCEE--------
Confidence 34666776654443 544322 122334567888887 67899999887654221 11122221 122111
Q ss_pred CCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEE
Q psy7977 363 SSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFS 431 (1225)
Q Consensus 363 ~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ 431 (1225)
....++++.. +|.+++++..+-+.+....++...+..+-++. ...|+++..||.|+.|+
T Consensus 319 -----~g~~l~~~~~-~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~----~~~l~v~~~dG~l~~~~ 377 (377)
T TIGR03300 319 -----VGGYLVVGDF-EGYLHWLSREDGSFVARLKTDGSGIASPPVVV----GDGLLVQTRDGDLYAFR 377 (377)
T ss_pred -----ECCEEEEEeC-CCEEEEEECCCCCEEEEEEcCCCccccCCEEE----CCEEEEEeCCceEEEeC
Confidence 2346778876 99999999888788776655432222233333 23599999999998763
No 30
>KOG2321|consensus
Probab=94.66 E-value=0.91 Score=55.21 Aligned_cols=218 Identities=15% Similarity=0.170 Sum_probs=115.9
Q ss_pred CCeEEEEccCcEEEEecCCcceeeeecCCCCCcEEEEEecCCEEEEEECCeEEEEEeeccc-eeEEeeeccCceeEEEEe
Q psy7977 276 PRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYLEVHGSE-IKQLAHRALEYEVACLDI 354 (1225)
Q Consensus 276 ~~~iVQVT~~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n~~~VlVasgg~Lv~feid~~~-L~ev~~~~l~~eIScLai 354 (1225)
+++.|+.+.+.=+++.. +++. -|+.+.--..+-...+++++.+++.|.++.+. |...+.. ..++.|+.+
T Consensus 114 ~DR~IefHak~G~hy~~----RIP~----~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~--~~~lN~v~i 183 (703)
T KOG2321|consen 114 NDRTIEFHAKYGRHYRT----RIPK----FGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETD--SGELNVVSI 183 (703)
T ss_pred cCceeeehhhcCeeeee----ecCc----CCccccccCCCccEEEeecCcceEEEEccccccccccccc--cccceeeee
Confidence 45677777777777653 2222 23334333333334444589999999998773 3332211 145667777
Q ss_pred ccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEee----cC---CC-CCCcccEEEEeeC-CeeEEEEEECCC
Q psy7977 355 SPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKE----PL---GG-EIIPRSILMTCFE-GHCYLLVALGDG 425 (1225)
Q Consensus 355 ~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~----~L---~~-~~~P~SIll~~l~-~~~~LlVGl~nG 425 (1225)
++. ...+++|+. +|.|+.|.-.+-+.+..- .+ ++ +.. .++.-+.+. ...++-||+++|
T Consensus 184 n~~-----------hgLla~Gt~-~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~-~svTal~F~d~gL~~aVGts~G 250 (703)
T KOG2321|consen 184 NEE-----------HGLLACGTE-DGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAA-PSVTALKFRDDGLHVAVGTSTG 250 (703)
T ss_pred cCc-----------cceEEeccc-CceEEEecchhhhhheeeecccccCCCcccccc-CcceEEEecCCceeEEeeccCC
Confidence 653 567888887 999999988654433321 11 11 111 234334443 378999999999
Q ss_pred cEEEEEEcCCCCccccceeeeecCccceEEEEeeCCceEEEEecCCc-EEEE-EcCCeeEEeecccccccccccCCCCCC
Q psy7977 426 SMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRP-TVIY-SSNHKLVFSNVNLRQVNHMCSLNAESY 503 (1225)
Q Consensus 426 ~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~~g~~~Vfa~sdrP-~liy-ss~g~l~~~pl~~~~v~~~s~F~se~~ 503 (1225)
.++.|.+-...--+ .+...+.-|++...+...+....++..+.. .=|+ ...|+.-.+--...+++.+|.|.
T Consensus 251 ~v~iyDLRa~~pl~---~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p---- 323 (703)
T KOG2321|consen 251 SVLIYDLRASKPLL---VKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDECTGKPMASIEPTSDLNDFCFVP---- 323 (703)
T ss_pred cEEEEEcccCCcee---ecccCCccceeeecccccCCCceEEecchHHhhhcccccCCceeeccccCCcCceeeec----
Confidence 99999875422111 123445567666555322333344444443 2222 22343322211122355566653
Q ss_pred CCeEEEEeCC--eEEEEEEcCC
Q psy7977 504 PDSLALATDS--TFTFGTIDEI 523 (1225)
Q Consensus 504 p~glv~vs~~--~LrI~~i~~~ 523 (1225)
..|+++.... .+...-||.+
T Consensus 324 ~sGm~f~Ane~~~m~~yyiP~L 345 (703)
T KOG2321|consen 324 GSGMFFTANESSKMHTYYIPSL 345 (703)
T ss_pred CCceEEEecCCCcceeEEcccc
Confidence 3466665433 3444444444
No 31
>KOG0291|consensus
Probab=94.62 E-value=18 Score=45.90 Aligned_cols=414 Identities=19% Similarity=0.236 Sum_probs=196.5
Q ss_pred CCeEEEEEcCCCEEEEEEEe--------------------Cccc---CCceeeeecEEEEecccC--cceeEEEecCCeE
Q psy7977 79 SERYLLGDLAGRLFMLLLEK--------------------EEKM---DGTFSVKEPKVELLGEIS--IPECLTYLDNGVV 133 (1225)
Q Consensus 79 ~~~~LL~~e~G~Ly~l~l~~--------------------d~~~---~Gr~~Vs~i~i~~~~tis--~~SsL~~L~~g~L 133 (1225)
..+++-..++|.++.-++.. ++++ .++..-...+..|+..-+ +-.+-...+...|
T Consensus 201 ~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~l 280 (893)
T KOG0291|consen 201 SLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLL 280 (893)
T ss_pred cceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEE
Confidence 45688899999999998871 0000 011011112244554322 1122233456778
Q ss_pred EEEeecCCeEEEEEeeCCCCCCCceEEEeeeecc-ccceeeEEeeccccCCccEEEEEecCCCccEEEEeecceeeEEEE
Q psy7977 134 FVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNL-APIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHAC 212 (1225)
Q Consensus 134 FvGS~~GDS~L~~i~~~~ddd~~~l~v~d~l~Nl-gPI~D~~v~d~~~~~~~qLva~sG~g~~GsLrilR~GI~~~~~~s 212 (1225)
-+|=..|--.||.+.. +.++..+.=- -||.++.+-..+ . +.|-|.++-|-|-+...--.-.++
T Consensus 281 vvgFssG~f~LyelP~--------f~lih~LSis~~~I~t~~~N~tG----D--WiA~g~~klgQLlVweWqsEsYVl-- 344 (893)
T KOG0291|consen 281 VVGFSSGEFGLYELPD--------FNLIHSLSISDQKILTVSFNSTG----D--WIAFGCSKLGQLLVWEWQSESYVL-- 344 (893)
T ss_pred EEEecCCeeEEEecCC--------ceEEEEeecccceeeEEEecccC----C--EEEEcCCccceEEEEEeeccceee--
Confidence 8888888877888754 6677766533 588887774322 1 445555566666655443322222
Q ss_pred eeCCCc-ceEeEeeeCCCCCCccEEEEEcC-CceEEEEEcCceeeeeccCCcc---cccCeEEEEeeCCCeEEEEccCc-
Q psy7977 213 IDLPGI-KGIWALSIGSPKNLDNTLVLSFV-GHTRVLTLSGAEVEETEMGGFT---SDQQTFYCGNVDPRTVLQVTPSA- 286 (1225)
Q Consensus 213 ~eLpgv-~~iWtl~~~~~~~~d~yLVlSf~-~~T~Vl~i~ge~veEv~~sgF~---~~~~TL~ag~l~~~~iVQVT~~~- 286 (1225)
+..|- ..+=++..+. -.++|+..-. +.-+|+-. .+||- .+++|=.+ ..+|+|..+
T Consensus 345 -KQQgH~~~i~~l~YSp---Dgq~iaTG~eDgKVKvWn~---------~SgfC~vTFteHts~V------t~v~f~~~g~ 405 (893)
T KOG0291|consen 345 -KQQGHSDRITSLAYSP---DGQLIATGAEDGKVKVWNT---------QSGFCFVTFTEHTSGV------TAVQFTARGN 405 (893)
T ss_pred -eccccccceeeEEECC---CCcEEEeccCCCcEEEEec---------cCceEEEEeccCCCce------EEEEEEecCC
Confidence 11110 1222222211 1122222111 11222222 12211 11111111 233444433
Q ss_pred ----------EEEEecCCcceeeeecCCCCCcEEEEEec-C--CEEEEE---ECCeEEEEEeeccceeEEeeeccCceeE
Q psy7977 287 ----------AILISTESKARVSSWEPPNGKSISVVSCN-K--NQVLCA---TGCDVYYLEVHGSEIKQLAHRALEYEVA 350 (1225)
Q Consensus 287 ----------IRli~~~~~~~i~eW~~p~g~~Iv~As~n-~--~~VlVa---sgg~Lv~feid~~~L~ev~~~~l~~eIS 350 (1225)
||..|....+-...+..|. +|-.+++. | .-+++| +.-+|....+..++|.++- .--+..|+
T Consensus 406 ~llssSLDGtVRAwDlkRYrNfRTft~P~--p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiL-sGHEgPVs 482 (893)
T KOG0291|consen 406 VLLSSSLDGTVRAWDLKRYRNFRTFTSPE--PIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDIL-SGHEGPVS 482 (893)
T ss_pred EEEEeecCCeEEeeeecccceeeeecCCC--ceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehh-cCCCCcce
Confidence 4444433222222333443 23333332 2 334444 2345666666666554431 12257899
Q ss_pred EEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCC-cceEEeecCCCCCCcccEEEEee-CCeeEEEEEECCCcEE
Q psy7977 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS-LEEVCKEPLGGEIIPRSILMTCF-EGHCYLLVALGDGSMF 428 (1225)
Q Consensus 351 cLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~-Le~v~~~~L~~~~~P~SIll~~l-~~~~~LlVGl~nG~L~ 428 (1225)
||++.+. .+.++=|.| |.||++|++=+ -.++ +.+ .+++.++-+.+ +.+--|-|.+-||.+.
T Consensus 483 ~l~f~~~-----------~~~LaS~SW-DkTVRiW~if~s~~~v--Etl---~i~sdvl~vsfrPdG~elaVaTldgqIt 545 (893)
T KOG0291|consen 483 GLSFSPD-----------GSLLASGSW-DKTVRIWDIFSSSGTV--ETL---EIRSDVLAVSFRPDGKELAVATLDGQIT 545 (893)
T ss_pred eeEEccc-----------cCeEEeccc-cceEEEEEeeccCcee--eeE---eeccceeEEEEcCCCCeEEEEEecceEE
Confidence 9999764 458999999 99999999832 1111 222 12333333333 2445688999999999
Q ss_pred EEEEcCC--CCcccccee---------eeecCcc---ceEEEEe-eCCceEEEEecCCcEEE-EEcC-C----eeEEee-
Q psy7977 429 YFSLDPA--SGRLTDKKK---------VTLGTQP---TVLKTFR-SLSTTNVFACSDRPTVI-YSSN-H----KLVFSN- 486 (1225)
Q Consensus 429 ~y~ld~~--sg~Ls~~k~---------~~LG~~p---V~L~~~~-~~g~~~Vfa~sdrP~li-yss~-g----~l~~~p- 486 (1225)
.|..... .|.+..+|- ++..... -.|..+. ..+..+|++-|..-+++ |.-. + +++++.
T Consensus 546 f~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~vllkkfqiS~N 625 (893)
T KOG0291|consen 546 FFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGVLLKKFQISDN 625 (893)
T ss_pred EEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchhheeeeEEeccc
Confidence 9975432 222222211 1111111 1133332 23557899999988765 5532 2 344432
Q ss_pred ccccc------ccccccCCCCCCCCeEEEEeC-CeEEEEEEc----CCC--CeeeEEEeCCCcccEEEEecCCCEEEEEE
Q psy7977 487 VNLRQ------VNHMCSLNAESYPDSLALATD-STFTFGTID----EIQ--KLHIRTVPLGEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 487 l~~~~------v~~~s~F~se~~p~glv~vs~-~~LrI~~i~----~~~--~l~ir~IpLg~TprrIay~p~s~~~vV~t 553 (1225)
.+.+. -..+++|- .+.++++ +...=++++ -.+ .+..|+..=.--+..+.|+|..++|++++
T Consensus 626 ~sLdg~~efln~rkmtEfG------~~~LiD~e~~~~e~~i~~~lpG~~~gdlssRr~rpeIrv~sv~fsPtgraFAaat 699 (893)
T KOG0291|consen 626 RSLDGVLEFLNRRKMTEFG------NMDLIDTEESDLEGRIDIALPGVQRGDLSSRRFRPEIRVTSVQFSPTGRAFAAAT 699 (893)
T ss_pred cchhHHHHHhccccccccC------CccccccccccccccccccCCccccCCccccccCceEEEEEEEECCCcCeeeeec
Confidence 12121 22444552 1233332 111111111 111 13333222222356889999999999998
No 32
>KOG1036|consensus
Probab=94.55 E-value=1.2 Score=50.69 Aligned_cols=170 Identities=17% Similarity=0.224 Sum_probs=99.9
Q ss_pred ceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcc--eEEeecCCCCCCcccEEEEeeCCeeEEEEEECC
Q psy7977 347 YEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLE--EVCKEPLGGEIIPRSILMTCFEGHCYLLVALGD 424 (1225)
Q Consensus 347 ~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le--~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~n 424 (1225)
..||.+.+.+ .++.|+|++| ||++++|+.+..+ ..+...- | ++=+.+.+....+.|--|
T Consensus 14 d~IS~v~f~~-----------~~~~LLvssW-DgslrlYdv~~~~l~~~~~~~~-----p--lL~c~F~d~~~~~~G~~d 74 (323)
T KOG1036|consen 14 DGISSVKFSP-----------SSSDLLVSSW-DGSLRLYDVPANSLKLKFKHGA-----P--LLDCAFADESTIVTGGLD 74 (323)
T ss_pred hceeeEEEcC-----------cCCcEEEEec-cCcEEEEeccchhhhhheecCC-----c--eeeeeccCCceEEEeccC
Confidence 4577777763 2567999999 9999999998642 2222211 1 222223345678999999
Q ss_pred CcEEEEEEcCCCCccccceeeeecC--ccceEEEEeeCCceEEEEecCCcEEEEEcCCeeEEeeccc-------cccccc
Q psy7977 425 GSMFYFSLDPASGRLTDKKKVTLGT--QPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL-------RQVNHM 495 (1225)
Q Consensus 425 G~L~~y~ld~~sg~Ls~~k~~~LG~--~pV~L~~~~~~g~~~Vfa~sdrP~liyss~g~l~~~pl~~-------~~v~~~ 495 (1225)
|.+.+|.++..+ .-.+|+ .|++..... .+...|++.| | .++++++-... +.-.
T Consensus 75 g~vr~~Dln~~~-------~~~igth~~~i~ci~~~-~~~~~vIsgs---W-----D~~ik~wD~R~~~~~~~~d~~k-- 136 (323)
T KOG1036|consen 75 GQVRRYDLNTGN-------EDQIGTHDEGIRCIEYS-YEVGCVISGS---W-----DKTIKFWDPRNKVVVGTFDQGK-- 136 (323)
T ss_pred ceEEEEEecCCc-------ceeeccCCCceEEEEee-ccCCeEEEcc---c-----CccEEEEeccccccccccccCc--
Confidence 999999987532 233443 344432221 1222333332 1 22222221110 0000
Q ss_pred ccCCCCCCCCeEEE-EeCCeEEEEEEcCCC-CeeeEEEeCCCcccEEEEecCCCEEEEEE
Q psy7977 496 CSLNAESYPDSLAL-ATDSTFTFGTIDEIQ-KLHIRTVPLGEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 496 s~F~se~~p~glv~-vs~~~LrI~~i~~~~-~l~ir~IpLg~TprrIay~p~s~~~vV~t 553 (1225)
.-|...-..+-++. ..+..+.|..+..+. .+..|.=+|.+..|.|+..|...-|++.+
T Consensus 137 kVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sS 196 (323)
T KOG1036|consen 137 KVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSS 196 (323)
T ss_pred eEEEEeccCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEe
Confidence 11222223344554 566788888887764 46677788999999999999999999997
No 33
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=94.47 E-value=13 Score=43.53 Aligned_cols=211 Identities=16% Similarity=0.221 Sum_probs=117.1
Q ss_pred CCeEEEEEeec--cceeEEeeeccCcee-EEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCC---cceEEe--
Q psy7977 324 GCDVYYLEVHG--SEIKQLAHRALEYEV-ACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS---LEEVCK-- 395 (1225)
Q Consensus 324 gg~Lv~feid~--~~L~ev~~~~l~~eI-ScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~---Le~v~~-- 395 (1225)
.+.+..|++|+ +.|..+.+..++... +.+++.+ ..++++++-+..|+|.++-+.+ +..+..
T Consensus 63 ~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~-----------~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~ 131 (346)
T COG2706 63 EGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDE-----------DGRFVFVANYHSGSVSVYPLQADGSLQPVVQVV 131 (346)
T ss_pred cCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECC-----------CCCEEEEEEccCceEEEEEcccCCccccceeee
Confidence 57788999986 478888777766544 5566644 3578999999899999999953 333221
Q ss_pred ecCCCC-------CCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCccccceeee----ecCccceEEEEeeCCceE
Q psy7977 396 EPLGGE-------IIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVT----LGTQPTVLKTFRSLSTTN 464 (1225)
Q Consensus 396 ~~L~~~-------~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~----LG~~pV~L~~~~~~g~~~ 464 (1225)
+..+.. .-+++..+..- ++..+.+-|+-..+..|.++ .|.|....... -|.|-+-|+| ++.-
T Consensus 132 ~h~g~~p~~rQ~~~h~H~a~~tP~-~~~l~v~DLG~Dri~~y~~~--dg~L~~~~~~~v~~G~GPRHi~FHp---n~k~- 204 (346)
T COG2706 132 KHTGSGPHERQESPHVHSANFTPD-GRYLVVPDLGTDRIFLYDLD--DGKLTPADPAEVKPGAGPRHIVFHP---NGKY- 204 (346)
T ss_pred ecCCCCCCccccCCccceeeeCCC-CCEEEEeecCCceEEEEEcc--cCccccccccccCCCCCcceEEEcC---CCcE-
Confidence 122110 01222222211 23445678888889889887 47665544322 2455555554 3333
Q ss_pred EEEecCC-cE-EE--EEc-CCeeEEe------ecccccccccccCCCCCCCCeEEEEeC---CeEEEEEEcCCC-Cee-e
Q psy7977 465 VFACSDR-PT-VI--YSS-NHKLVFS------NVNLRQVNHMCSLNAESYPDSLALATD---STFTFGTIDEIQ-KLH-I 528 (1225)
Q Consensus 465 Vfa~sdr-P~-li--yss-~g~l~~~------pl~~~~v~~~s~F~se~~p~glv~vs~---~~LrI~~i~~~~-~l~-i 528 (1225)
+.+.++= .. .+ |.. .+++.-. |-.+..-..++..+-..+ .-|+|+++ +.|.++++++.. ++. +
T Consensus 205 aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~d-GrFLYasNRg~dsI~~f~V~~~~g~L~~~ 283 (346)
T COG2706 205 AYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPD-GRFLYASNRGHDSIAVFSVDPDGGKLELV 283 (346)
T ss_pred EEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCC-CCEEEEecCCCCeEEEEEEcCCCCEEEEE
Confidence 3333331 12 22 332 2433321 112222223333332222 34777765 689999998874 332 3
Q ss_pred EEEeCCC-cccEEEEecCCCEEEEEE
Q psy7977 529 RTVPLGE-APRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 529 r~IpLg~-TprrIay~p~s~~~vV~t 553 (1225)
...|.++ +||-+...|..+.++++-
T Consensus 284 ~~~~teg~~PR~F~i~~~g~~Liaa~ 309 (346)
T COG2706 284 GITPTEGQFPRDFNINPSGRFLIAAN 309 (346)
T ss_pred EEeccCCcCCccceeCCCCCEEEEEc
Confidence 4455555 488888888777766664
No 34
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=94.43 E-value=16 Score=44.46 Aligned_cols=275 Identities=13% Similarity=0.182 Sum_probs=149.4
Q ss_pred CCeEEEEeecCCeEEEEEeeCCCCCCCceEEEeeeeccccceeeEEeecc-ccCC----------ccEEEEE---ecCCC
Q psy7977 130 NGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLE-RQGQ----------GQLVTCS---GGFKE 195 (1225)
Q Consensus 130 ~g~LFvGS~~GDS~L~~i~~~~ddd~~~l~v~d~l~NlgPI~D~~v~d~~-~~~~----------~qLva~s---G~g~~ 195 (1225)
.+.+.+||..|.=.+|+=...+- +...+ +++.=.+ .||+++..++.. +... ..+|... |....
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~-~~~~l-llE~~l~-~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~ 113 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEF-QPEDL-LLETQLK-DPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEH 113 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCC-CCccE-EEEEecC-CcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCccc
Confidence 36799999999755555422210 11122 2333222 699999999852 2221 1223332 22222
Q ss_pred ccEEEEeecceeeEEEEeeCCCcceEeEeeeC--CCCCCccEEEEEcCCceEEEEEcCceee-eeccCCcccccCeEEEE
Q psy7977 196 GSLRIIRNGIGIEEHACIDLPGIKGIWALSIG--SPKNLDNTLVLSFVGHTRVLTLSGAEVE-ETEMGGFTSDQQTFYCG 272 (1225)
Q Consensus 196 GsLrilR~GI~~~~~~s~eLpgv~~iWtl~~~--~~~~~d~yLVlSf~~~T~Vl~i~ge~ve-Ev~~sgF~~~~~TL~ag 272 (1225)
|.- +.++.+-.-.|+ +..|++... .+...+++|++--.+.++-|- +++.+- ....++|...+|=.++.
T Consensus 114 g~~------~~L~~~yeh~l~--~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~f-eqe~~~f~~~lp~~llPgPl~Y~~ 184 (418)
T PF14727_consen 114 GNQ------YQLELIYEHSLQ--RTAYNMCCGPFGGVKGRDFICVQSMDGSLSFF-EQESFAFSRFLPDFLLPGPLCYCP 184 (418)
T ss_pred CcE------EEEEEEEEEecc--cceeEEEEEECCCCCCceEEEEEecCceEEEE-eCCcEEEEEEcCCCCCCcCeEEee
Confidence 222 223333333343 334444332 122225666665555555332 244333 44566788888888877
Q ss_pred eeCCCeEEEEcc-CcEEEEec---------------------CCcceeeeecCCCCCcEEEEEe-----cCCEEEEEECC
Q psy7977 273 NVDPRTVLQVTP-SAAILIST---------------------ESKARVSSWEPPNGKSISVVSC-----NKNQVLCATGC 325 (1225)
Q Consensus 273 ~l~~~~iVQVT~-~~IRli~~---------------------~~~~~i~eW~~p~g~~Iv~As~-----n~~~VlVasgg 325 (1225)
.. +.+|=++. ..+..|+. ..++..++|.-.-|..|..-.+ +.+.|+|....
T Consensus 185 ~t--Dsfvt~sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nlGE~~l~i~v~~~~~~~~~IvvLger 262 (418)
T PF14727_consen 185 RT--DSFVTASSSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNLGEQALDIQVVRFSSSESDIVVLGER 262 (418)
T ss_pred cC--CEEEEecCceeEEEecHHHhhhccccccccccccccccccccccceeEEECCceeEEEEEEEcCCCCceEEEEecc
Confidence 75 34444443 35555542 1135668998776665544333 34456665666
Q ss_pred eEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcc
Q psy7977 326 DVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPR 405 (1225)
Q Consensus 326 ~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~ 405 (1225)
.|..|.-. +.+. -.+.|+...+|+.....+... .+.....++|++. ++++.||. +.+.++...++ ..|-
T Consensus 263 ~Lf~l~~~-G~l~--~~krLd~~p~~~~~Y~~~~~~---~~~~~~~llV~t~-t~~LlVy~--d~~L~WsA~l~--~~PV 331 (418)
T PF14727_consen 263 SLFCLKDN-GSLR--FQKRLDYNPSCFCPYRVPWYN---EPSTRLNLLVGTH-TGTLLVYE--DTTLVWSAQLP--HVPV 331 (418)
T ss_pred eEEEEcCC-CeEE--EEEecCCceeeEEEEEeeccc---CCCCceEEEEEec-CCeEEEEe--CCeEEEecCCC--CCCE
Confidence 77766532 3333 345567888888876552211 0112345888987 99999986 44556766663 6787
Q ss_pred cEEEEeeCCeeEEEEEEC-CCcEEE
Q psy7977 406 SILMTCFEGHCYLLVALG-DGSMFY 429 (1225)
Q Consensus 406 SIll~~l~~~~~LlVGl~-nG~L~~ 429 (1225)
+|.++.+++..=++|.|. +|.|-.
T Consensus 332 al~v~~~~~~~G~IV~Ls~~G~L~v 356 (418)
T PF14727_consen 332 ALSVANFNGLKGLIVSLSDEGQLSV 356 (418)
T ss_pred EEEecccCCCCceEEEEcCCCcEEE
Confidence 888888776555666665 666543
No 35
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=94.39 E-value=13 Score=43.40 Aligned_cols=296 Identities=17% Similarity=0.267 Sum_probs=162.1
Q ss_pred CCCEEEEEEEeCcccCCceeeeecEEEEecccCcceeEEEecCC-eEEEEeecCC---eEEEEEeeCCCCCCCceEEEe-
Q psy7977 88 AGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNG-VVFVGSRLGD---SQLVKLNRSPDENGTYVSVME- 162 (1225)
Q Consensus 88 ~G~Ly~l~l~~d~~~~Gr~~Vs~i~i~~~~tis~~SsL~~L~~g-~LFvGS~~GD---S~L~~i~~~~ddd~~~l~v~d- 162 (1225)
...+|.+.|+.+ .|. ++ .++.+....-|+=|+.-.++ +||++-+-|+ =.-|+|.. ++..|+.+.
T Consensus 15 s~gI~v~~ld~~---~g~--l~--~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~----~~G~Lt~ln~ 83 (346)
T COG2706 15 SQGIYVFNLDTK---TGE--LS--LLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDP----DDGRLTFLNR 83 (346)
T ss_pred CCceEEEEEeCc---ccc--cc--hhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcC----CCCeEEEeec
Confidence 467888888754 242 22 23344566677878777776 8999888755 23344432 223465554
Q ss_pred -eeeccccceeeEEeeccccCCccEEEEEecCCCccEEEEeecceeeEEEEeeCCCcceEeEeeeCCCCCCccEEEEEcC
Q psy7977 163 -SFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFV 241 (1225)
Q Consensus 163 -~l~NlgPI~D~~v~d~~~~~~~qLva~sG~g~~GsLrilR~GI~~~~~~s~eLpgv~~iWtl~~~~~~~~d~yLVlSf~ 241 (1225)
.++.-+| |-+..+. +.|.+. +..+..|++++..-.-.- .+|.+-
T Consensus 84 ~~~~g~~p----~yvsvd~--~g~~vf-~AnY~~g~v~v~p~~~dG------------~l~~~v---------------- 128 (346)
T COG2706 84 QTLPGSPP----CYVSVDE--DGRFVF-VANYHSGSVSVYPLQADG------------SLQPVV---------------- 128 (346)
T ss_pred cccCCCCC----eEEEECC--CCCEEE-EEEccCceEEEEEcccCC------------ccccce----------------
Confidence 4455555 3333322 334443 344555777665431110 112110
Q ss_pred CceEEEEEcCcee-ee-----eccCCcccccCeEEEEeeCCCeEEEEccCcEEEEecCCcc----eeeeecCCCCCcEEE
Q psy7977 242 GHTRVLTLSGAEV-EE-----TEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKA----RVSSWEPPNGKSISV 311 (1225)
Q Consensus 242 ~~T~Vl~i~ge~v-eE-----v~~sgF~~~~~TL~ag~l~~~~iVQVT~~~IRli~~~~~~----~i~eW~~p~g~~Iv~ 311 (1225)
.++.-++... |+ +....|..+.+.|.+-.++.+ .|.+++.+.++ .....++..|.+=..
T Consensus 129 ---~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~D--------ri~~y~~~dg~L~~~~~~~v~~G~GPRHi~ 197 (346)
T COG2706 129 ---QVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTD--------RIFLYDLDDGKLTPADPAEVKPGAGPRHIV 197 (346)
T ss_pred ---eeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCc--------eEEEEEcccCccccccccccCCCCCcceEE
Confidence 0000001000 00 122233344444444444422 23344433221 112224445555555
Q ss_pred EEecCCEEEEE--ECCeEEEEEeec--cceeEEeeec-----c--CceeEEEEeccCCCCCCCCccccCcEEEEEEecCC
Q psy7977 312 VSCNKNQVLCA--TGCDVYYLEVHG--SEIKQLAHRA-----L--EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380 (1225)
Q Consensus 312 As~n~~~VlVa--sgg~Lv~feid~--~~L~ev~~~~-----l--~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~ 380 (1225)
-.-|++++-++ -++++..++.++ ++++++.... + ..+.++|++.+ ..+||.+.-....
T Consensus 198 FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~-----------dGrFLYasNRg~d 266 (346)
T COG2706 198 FHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISP-----------DGRFLYASNRGHD 266 (346)
T ss_pred EcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECC-----------CCCEEEEecCCCC
Confidence 55677777776 488999999987 4677654322 2 24556777765 2568888876677
Q ss_pred eEEEEeCCC----cceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCc-EEEEEEcCCCCccccceeeeecCccceE
Q psy7977 381 SARLLSLPS----LEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGS-MFYFSLDPASGRLTDKKKVTLGTQPTVL 454 (1225)
Q Consensus 381 tv~IlsL~~----Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~-L~~y~ld~~sg~Ls~~k~~~LG~~pV~L 454 (1225)
+|.+|++.. |+.+...... .-.||+.-+.. +..+|++...++. +..|+.|+.+|.|.......-+..|+-+
T Consensus 267 sI~~f~V~~~~g~L~~~~~~~te-g~~PR~F~i~~--~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv 342 (346)
T COG2706 267 SIAVFSVDPDGGKLELVGITPTE-GQFPRDFNINP--SGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCV 342 (346)
T ss_pred eEEEEEEcCCCCEEEEEEEeccC-CcCCccceeCC--CCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEE
Confidence 899999853 3333333332 23589876664 4578888887665 6779999999998876666666677654
No 36
>KOG0310|consensus
Probab=94.34 E-value=0.5 Score=56.35 Aligned_cols=129 Identities=16% Similarity=0.149 Sum_probs=79.9
Q ss_pred cCcEEEEecCCc-ceeeeecCCCCCcEEEEEec--CCEEEEEECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCC
Q psy7977 284 PSAAILISTESK-ARVSSWEPPNGKSISVVSCN--KNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNE 360 (1225)
Q Consensus 284 ~~~IRli~~~~~-~~i~eW~~p~g~~Iv~As~n--~~~VlVasgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~ 360 (1225)
..-||++|.... ..+.+.. .|.+|.....- +.+++-|.|.++-..++..+.-....+....+.|+||.+..-
T Consensus 175 Dg~vrl~DtR~~~~~v~eln--hg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~--- 249 (487)
T KOG0310|consen 175 DGKVRLWDTRSLTSRVVELN--HGCPVESVLALPSGSLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASD--- 249 (487)
T ss_pred CceEEEEEeccCCceeEEec--CCCceeeEEEcCCCCEEEEcCCCeEEEEEecCCceehhhhhcccceEEEEEeecC---
Confidence 346888876532 2333332 44555544443 344444577788887776543222223335678999999652
Q ss_pred CCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEE
Q psy7977 361 ETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYF 430 (1225)
Q Consensus 361 ~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y 430 (1225)
....+..|+ |+.|.||++.+++.++.-..++ ..=|+.+.. +...+.+||.||.+..=
T Consensus 250 -------~~rLlS~sL--D~~VKVfd~t~~Kvv~s~~~~~--pvLsiavs~--dd~t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 250 -------STRLLSGSL--DRHVKVFDTTNYKVVHSWKYPG--PVLSIAVSP--DDQTVVIGMSNGLVSIR 306 (487)
T ss_pred -------CceEeeccc--ccceEEEEccceEEEEeeeccc--ceeeEEecC--CCceEEEecccceeeee
Confidence 233444444 9999999999999988765542 222444443 56789999999998764
No 37
>PLN00181 protein SPA1-RELATED; Provisional
Probab=94.33 E-value=3.2 Score=54.60 Aligned_cols=175 Identities=12% Similarity=0.123 Sum_probs=103.0
Q ss_pred EEEEEEECCCCcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEecC
Q psy7977 1005 HNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKG 1084 (1225)
Q Consensus 1005 s~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev~G 1084 (1225)
+.|++.|..+.+.+..+... ..+. ++.|......++++|.. .|.|++|++.+++..+..-..-.+
T Consensus 598 g~v~iWd~~~~~~~~~~~~~--~~v~---~v~~~~~~g~~latgs~----------dg~I~iwD~~~~~~~~~~~~~h~~ 662 (793)
T PLN00181 598 GSVKLWSINQGVSIGTIKTK--ANIC---CVQFPSESGRSLAFGSA----------DHKVYYYDLRNPKLPLCTMIGHSK 662 (793)
T ss_pred CEEEEEECCCCcEEEEEecC--CCeE---EEEEeCCCCCEEEEEeC----------CCeEEEEECCCCCccceEecCCCC
Confidence 57999999988888777532 3333 34564445578888852 478999998764322211122346
Q ss_pred ceeeeccccCeEEE-E-eCCEEEEEEcCCC------ceeeeeeccccee-EEEEEEEECCEEEEeeccccEEEEEEecCC
Q psy7977 1085 ACYSMCEFNGKLLA-S-INSTVRLFEWTNE------KELRLECSHFNNI-IALFLKVKGDFILVGDLMRSLTLLQYKTME 1155 (1225)
Q Consensus 1085 ~v~al~~f~G~LLa-~-vg~~l~vy~l~~~------~~L~~e~~~~~~~-i~~~l~~~g~~IlvGD~~kSv~~l~y~~~~ 1155 (1225)
.|+++.-..|..++ | -..+|++|++... +.++. ....... ..+.....+++|+.|.-=..+.+.......
T Consensus 663 ~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~-~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~ 741 (793)
T PLN00181 663 TVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHS-FMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPM 741 (793)
T ss_pred CEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEE-EcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCC
Confidence 77777655564444 3 4578999999642 22331 1111111 123344457888888876666664422111
Q ss_pred Ce----------EEEEeccCCCceeEEEEeeeCC-cEEEEcCCCcEEEEEe
Q psy7977 1156 GS----------FEEISRDYNPNWMTSIEILDDE-LFLGAENSYNLFICQK 1195 (1225)
Q Consensus 1156 ~~----------L~~~arD~~~~wvta~~~Ld~d-t~l~aD~~gNl~vl~~ 1195 (1225)
.. ...+.-+....++.++++=.+. .++++..+|+|.+++.
T Consensus 742 ~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 742 PVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred ceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 00 0001113344578888886544 7899999999999874
No 38
>KOG0319|consensus
Probab=94.30 E-value=3.5 Score=51.78 Aligned_cols=223 Identities=14% Similarity=0.109 Sum_probs=115.4
Q ss_pred CcEEEEEec-CCEEEE-EE-CCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEE
Q psy7977 307 KSISVVSCN-KNQVLC-AT-GCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISAR 383 (1225)
Q Consensus 307 ~~Iv~As~n-~~~VlV-as-gg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~ 383 (1225)
..|++-++. ++.+++ +. +.-+-.++++.+.+...=+..-+..+--+++.+ ....++.|.- |+.++
T Consensus 63 d~ita~~l~~d~~~L~~a~rs~llrv~~L~tgk~irswKa~He~Pvi~ma~~~-----------~g~LlAtgga-D~~v~ 130 (775)
T KOG0319|consen 63 DEITALALTPDEEVLVTASRSQLLRVWSLPTGKLIRSWKAIHEAPVITMAFDP-----------TGTLLATGGA-DGRVK 130 (775)
T ss_pred hhhheeeecCCccEEEEeeccceEEEEEcccchHhHhHhhccCCCeEEEEEcC-----------CCceEEeccc-cceEE
Confidence 356655554 344444 44 445556677655332210111133444555543 2467888886 99999
Q ss_pred EEeCCCcceEE-eecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCccc-----cceeeeecCccceEEEE
Q psy7977 384 LLSLPSLEEVC-KEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT-----DKKKVTLGTQPTVLKTF 457 (1225)
Q Consensus 384 IlsL~~Le~v~-~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~Ls-----~~k~~~LG~~pV~L~~~ 457 (1225)
+|++..-...+ -...+ .+..++++.+-.....|..|-.||.+..|.+....-.+. ......|+-.+.
T Consensus 131 VWdi~~~~~th~fkG~g--GvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d----- 203 (775)
T KOG0319|consen 131 VWDIKNGYCTHSFKGHG--GVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSED----- 203 (775)
T ss_pred EEEeeCCEEEEEecCCC--ceEEEEEeCCccchhheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccC-----
Confidence 99996422222 12332 344555554433345588999999999999863211111 111122222221
Q ss_pred eeCCceEEEEec-CCcEEEEEc--CCeeEEeecccccccccccCCCCC-CCCeEEEEeCCeEEEEEEcCCC--CeeeEEE
Q psy7977 458 RSLSTTNVFACS-DRPTVIYSS--NHKLVFSNVNLRQVNHMCSLNAES-YPDSLALATDSTFTFGTIDEIQ--KLHIRTV 531 (1225)
Q Consensus 458 ~~~g~~~Vfa~s-drP~liyss--~g~l~~~pl~~~~v~~~s~F~se~-~p~glv~vs~~~LrI~~i~~~~--~l~ir~I 531 (1225)
+ ..++..| |+-..+|.- ...++..|+. +.++++.-.+.+. -...++++.++.=.++..+... -.-.++.
T Consensus 204 ---~-~~~ls~~RDkvi~vwd~~~~~~l~~lp~y-e~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~ 278 (775)
T KOG0319|consen 204 ---S-LELLSVGRDKVIIVWDLVQYKKLKTLPLY-ESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQ 278 (775)
T ss_pred ---C-ceEEEeccCcEEEEeehhhhhhhheechh-hheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhcc
Confidence 2 2333333 344444432 3345566653 4455555554422 2235777777666666666542 1222223
Q ss_pred eCCCcccEEEEecCCCEEEEEE
Q psy7977 532 PLGEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 532 pLg~TprrIay~p~s~~~vV~t 553 (1225)
|=++-..+.++.+..+-+++++
T Consensus 279 ~~~~e~~~~~~~~~~~~~l~vt 300 (775)
T KOG0319|consen 279 SDSEEIDHLLAIESMSQLLLVT 300 (775)
T ss_pred CCchhhhcceeccccCceEEEE
Confidence 3244477888888777777776
No 39
>KOG0650|consensus
Probab=94.23 E-value=4.1 Score=50.06 Aligned_cols=55 Identities=22% Similarity=0.216 Sum_probs=38.9
Q ss_pred cCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCC
Q psy7977 368 KAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDG 425 (1225)
Q Consensus 368 ~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG 425 (1225)
+..|++-|.. ||+|+||.+.+...+.+-.++ ...++|+....+..+.|.++.++-
T Consensus 411 ~G~wlasGsd-DGtvriWEi~TgRcvr~~~~d--~~I~~vaw~P~~~~~vLAvA~~~~ 465 (733)
T KOG0650|consen 411 SGEWLASGSD-DGTVRIWEIATGRCVRTVQFD--SEIRSVAWNPLSDLCVLAVAVGEC 465 (733)
T ss_pred CcceeeecCC-CCcEEEEEeecceEEEEEeec--ceeEEEEecCCCCceeEEEEecCc
Confidence 4679999987 999999999876655554553 344566666655666677777665
No 40
>KOG1539|consensus
Probab=94.01 E-value=25 Score=45.14 Aligned_cols=279 Identities=15% Similarity=0.138 Sum_probs=146.0
Q ss_pred CceeeeecCCeEEEEEcCCCEEEEEEEeCcccCCceeeeecEEEEecccCcceeEEEec--CCeEEEEeecCCeEEEEEe
Q psy7977 71 LGSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLD--NGVVFVGSRLGDSQLVKLN 148 (1225)
Q Consensus 71 ~~~ifv~~~~~~LL~~e~G~Ly~l~l~~d~~~~Gr~~Vs~i~i~~~~tis~~SsL~~L~--~g~LFvGS~~GDS~L~~i~ 148 (1225)
+|..+++..+++++.+--|.-|.+. | +..+.+-.++ -+.|..++.+. ..++|+|+. ..++-+.
T Consensus 37 VP~~~~~~~~~~~vtt~vgksfqvY---d--------~~kl~ll~vs-~~lp~~I~alas~~~~vy~A~g---~~i~~~~ 101 (910)
T KOG1539|consen 37 VPFRVVALGSTFYVTTCVGKSFQVY---D--------VNKLNLLFVS-KPLPDKITALASDKDYVYVASG---NKIYAYA 101 (910)
T ss_pred CceeeeecCceEEEEEecCceEEEE---e--------ccceEEEEec-CCCCCceEEEEecCceEEEecC---cEEEEEE
Confidence 3444555577888888888887663 3 2234444433 24555555553 467888874 3445554
Q ss_pred eCCCCCCCceEEEeeeeccccceeeEEeeccccCCccEEEEEecCCCccEEEEeecceeeEEEEeeCCCcceEeEeeeCC
Q psy7977 149 RSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGS 228 (1225)
Q Consensus 149 ~~~ddd~~~l~v~d~l~NlgPI~D~~v~d~~~~~~~qLva~sG~g~~GsLrilR~GI~~~~~~s~eLpgv~~iWtl~~~~ 228 (1225)
+.. .+.+.+.--+ .+-.+.+.-| +.+.+.+..++-.+|-.....
T Consensus 102 rgk-------~i~~~~~~~~-------------a~v~~l~~fG----------------e~lia~d~~~~l~vw~~s~~~ 145 (910)
T KOG1539|consen 102 RGK-------HIRHTTLLHG-------------AKVHLLLPFG----------------EHLIAVDISNILFVWKTSSIQ 145 (910)
T ss_pred ccc-------eEEEEecccc-------------ceEEEEeeec----------------ceEEEEEccCcEEEEEecccc
Confidence 432 1112221111 1111111111 123344556777888765431
Q ss_pred CCCCccEEEEEcCCceEEEEEcCceeeeeccCCcccccCeEEEEeeCCCeEEEEccCcEEEEecCCcceeeeecCCCCCc
Q psy7977 229 PKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKS 308 (1225)
Q Consensus 229 ~~~~d~yLVlSf~~~T~Vl~i~ge~veEv~~sgF~~~~~TL~ag~l~~~~iVQVT~~~IRli~~~~~~~i~eW~~p~g~~ 308 (1225)
++.|+= ..+++..++.+..+-.+. | .-+.-++=.....+.+++..+++.+.+...= +.+
T Consensus 146 ---~e~~l~------~~~~~~~~~~Ital~HP~------T-----YLNKIvvGs~~G~lql~Nvrt~K~v~~f~~~-~s~ 204 (910)
T KOG1539|consen 146 ---EELYLQ------STFLKVEGDFITALLHPS------T-----YLNKIVVGSSQGRLQLWNVRTGKVVYTFQEF-FSR 204 (910)
T ss_pred ---cccccc------ceeeeccCCceeeEecch------h-----heeeEEEeecCCcEEEEEeccCcEEEEeccc-ccc
Confidence 111321 234444344344331110 1 1122233344445556665555555554421 145
Q ss_pred EEEEEecCC--EEEEE-ECCeEEEEEeeccceeEEeeecc-CceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEE
Q psy7977 309 ISVVSCNKN--QVLCA-TGCDVYYLEVHGSEIKQLAHRAL-EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARL 384 (1225)
Q Consensus 309 Iv~As~n~~--~VlVa-sgg~Lv~feid~~~L~ev~~~~l-~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~I 384 (1225)
|+++.-..- -|+|. .+|++++|.+..+++.. +... ..+|+.+++.. .....+|.|+. .|.+.+
T Consensus 205 IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~--sFk~d~g~VtslSFrt----------DG~p~las~~~-~G~m~~ 271 (910)
T KOG1539|consen 205 ITAIEQSPALDVVAIGLENGTVIIFNLKFDKILM--SFKQDWGRVTSLSFRT----------DGNPLLASGRS-NGDMAF 271 (910)
T ss_pred eeEeccCCcceEEEEeccCceEEEEEcccCcEEE--EEEccccceeEEEecc----------CCCeeEEeccC-CceEEE
Confidence 776655543 33333 68999999987553222 2223 47899998854 24678899987 999999
Q ss_pred EeCCCcceEEe-ecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCC
Q psy7977 385 LSLPSLEEVCK-EPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437 (1225)
Q Consensus 385 lsL~~Le~v~~-~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg 437 (1225)
|+|+.-..+.. +.....+++... .+++.|.|+=.-.|..|..|.+|..+|
T Consensus 272 wDLe~kkl~~v~~nah~~sv~~~~---fl~~epVl~ta~~DnSlk~~vfD~~dg 322 (910)
T KOG1539|consen 272 WDLEKKKLINVTRNAHYGSVTGAT---FLPGEPVLVTAGADNSLKVWVFDSGDG 322 (910)
T ss_pred EEcCCCeeeeeeeccccCCcccce---ecCCCceEeeccCCCceeEEEeeCCCC
Confidence 99986333322 111111222221 224677777777788888888886555
No 41
>KOG0649|consensus
Probab=93.96 E-value=12 Score=41.73 Aligned_cols=237 Identities=18% Similarity=0.260 Sum_probs=119.5
Q ss_pred CeEEEEeecCCeEEEEEeeCCC---CCCCceEEEeeeeccccceeeEEeeccccCCccEEEEEecCCCccEEEEeeccee
Q psy7977 131 GVVFVGSRLGDSQLVKLNRSPD---ENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGI 207 (1225)
Q Consensus 131 g~LFvGS~~GDS~L~~i~~~~d---dd~~~l~v~d~l~NlgPI~D~~v~d~~~~~~~qLva~sG~g~~GsLrilR~GI~~ 207 (1225)
.+||+|+.+||=.++.+++... +......++-.-..=|||.|++..| .++..||- |-++ |..-
T Consensus 23 ~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d-------~~Lls~gd---G~V~----gw~W 88 (325)
T KOG0649|consen 23 QYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD-------DFLLSGGD---GLVY----GWEW 88 (325)
T ss_pred eEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh-------hheeeccC---ceEE----Eeee
Confidence 4699999999999999988632 1123455555566779999999875 33444444 3332 2211
Q ss_pred eEEEEeeCCCcceEeEeeeCCCCCCccEEEEEcCCceEEEEEcCceeeeeccCCccccc-CeEEEEeeCCCeEEEEccCc
Q psy7977 208 EEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQ-QTFYCGNVDPRTVLQVTPSA 286 (1225)
Q Consensus 208 ~~~~s~eLpgv~~iWtl~~~~~~~~d~yLVlSf~~~T~Vl~i~ge~veEv~~sgF~~~~-~TL~ag~l~~~~iVQVT~~~ 286 (1225)
.+... --+.+.+|-++.... + +.-++-|++.--++..+ .-++|| |++.+-|+.
T Consensus 89 ~E~~e--s~~~K~lwe~~~P~~--------------~-----~~~evPeINam~ldP~enSi~~Ag--GD~~~y~~d--- 142 (325)
T KOG0649|consen 89 NEEEE--SLATKRLWEVKIPMQ--------------V-----DAVEVPEINAMWLDPSENSILFAG--GDGVIYQVD--- 142 (325)
T ss_pred hhhhh--hccchhhhhhcCccc--------------c-----CcccCCccceeEeccCCCcEEEec--CCeEEEEEE---
Confidence 11111 124456666543210 0 01123333332233222 233444 555655542
Q ss_pred EEEEecCCcceeeeecCCCCCcEEEEE-ecCCEEEEE-ECCeEEEEEeeccc----eeEEee-----eccCceeEEEEec
Q psy7977 287 AILISTESKARVSSWEPPNGKSISVVS-CNKNQVLCA-TGCDVYYLEVHGSE----IKQLAH-----RALEYEVACLDIS 355 (1225)
Q Consensus 287 IRli~~~~~~~i~eW~~p~g~~Iv~As-~n~~~VlVa-sgg~Lv~feid~~~----L~ev~~-----~~l~~eIScLai~ 355 (1225)
.+++++.-+.+.-.+---..+. ...+||+-. .+|.+-+......+ +....+ .+-..+|-||+..
T Consensus 143 -----lE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~ 217 (325)
T KOG0649|consen 143 -----LEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVN 217 (325)
T ss_pred -----ecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEecc
Confidence 3332232333321111011122 234566654 67777766655431 111222 2235778888753
Q ss_pred cCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEc
Q psy7977 356 PLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLD 433 (1225)
Q Consensus 356 ~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld 433 (1225)
++|++-|. ...+.+|.|+..+..+.-+++ --+-.+++.....|..| ....+-.|.+.
T Consensus 218 -------------edWlvCGg--Gp~lslwhLrsse~t~vfpip-----a~v~~v~F~~d~vl~~G-~g~~v~~~~l~ 274 (325)
T KOG0649|consen 218 -------------EDWLVCGG--GPKLSLWHLRSSESTCVFPIP-----ARVHLVDFVDDCVLIGG-EGNHVQSYTLN 274 (325)
T ss_pred -------------CceEEecC--CCceeEEeccCCCceEEEecc-----cceeEeeeecceEEEec-cccceeeeeec
Confidence 56887764 568999999987766655553 22333444334444444 23345556554
No 42
>KOG2110|consensus
Probab=93.82 E-value=2.1 Score=49.86 Aligned_cols=142 Identities=16% Similarity=0.214 Sum_probs=85.7
Q ss_pred ccCcEEEEecCCcceeeeecCCCCCcEEEEEec--CCEEEEE-ECCe-EEEEEeecc-ceeEEeeeccCceeEEEEeccC
Q psy7977 283 TPSAAILISTESKARVSSWEPPNGKSISVVSCN--KNQVLCA-TGCD-VYYLEVHGS-EIKQLAHRALEYEVACLDISPL 357 (1225)
Q Consensus 283 T~~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n--~~~VlVa-sgg~-Lv~feid~~-~L~ev~~~~l~~eIScLai~~~ 357 (1225)
|+..|++++....+.+..+.+-. ..+.+-+++ +..++-| +.|+ |-+|.+.++ .+.|..+-.....|.+|++.+.
T Consensus 151 t~GdV~l~d~~nl~~v~~I~aH~-~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~d 229 (391)
T KOG2110|consen 151 TSGDVVLFDTINLQPVNTINAHK-GPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPD 229 (391)
T ss_pred CCceEEEEEcccceeeeEEEecC-CceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCC
Confidence 36778899887666666666433 345555555 4455555 4566 446777666 4556554444556667777652
Q ss_pred CCCCCCCccccCcEEEEEEecCCeEEEEeCCC--cceEE-------------ee---cCCC--------------CCCcc
Q psy7977 358 SNEETSSEPAKAQLAAVGLWTDISARLLSLPS--LEEVC-------------KE---PLGG--------------EIIPR 405 (1225)
Q Consensus 358 ~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~--Le~v~-------------~~---~L~~--------------~~~P~ 405 (1225)
++++++... .+||+||.|++ .+... +. -+|. ..+|.
T Consensus 230 -----------s~~L~~sS~-TeTVHiFKL~~~~~~~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~FAt~~l~~ 297 (391)
T KOG2110|consen 230 -----------SQFLAASSN-TETVHIFKLEKVSNNPPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRKFATAKLPE 297 (391)
T ss_pred -----------CCeEEEecC-CCeEEEEEecccccCCCCCCCCCCcccchhhhhhhhhcchhhhhhhhhccceeEEEccC
Confidence 567877776 89999999963 11110 00 0110 00111
Q ss_pred -----cEEEEeeCCeeEEEEEECCCcEEEEEEcCCCC
Q psy7977 406 -----SILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437 (1225)
Q Consensus 406 -----SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg 437 (1225)
...+......+++.|+..||.+..|++++.+|
T Consensus 298 s~~~~~~~l~~~~~~~~v~vas~dG~~y~y~l~~~~g 334 (391)
T KOG2110|consen 298 SGRKNICSLSSIQKIPRVLVASYDGHLYSYRLPPKEG 334 (391)
T ss_pred CCccceEEeeccCCCCEEEEEEcCCeEEEEEcCCCCC
Confidence 12222223469999999999999999998643
No 43
>PTZ00420 coronin; Provisional
Probab=93.38 E-value=30 Score=43.91 Aligned_cols=111 Identities=11% Similarity=0.110 Sum_probs=63.3
Q ss_pred cEEEEEecC--CEEEE-E-ECCeEEEEEeeccc--eeE----Eee-eccCceeEEEEeccCCCCCCCCccccCcEEEEEE
Q psy7977 308 SISVVSCNK--NQVLC-A-TGCDVYYLEVHGSE--IKQ----LAH-RALEYEVACLDISPLSNEETSSEPAKAQLAAVGL 376 (1225)
Q Consensus 308 ~Iv~As~n~--~~VlV-a-sgg~Lv~feid~~~--L~e----v~~-~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~ 376 (1225)
.|...+.+. +.+++ + .++.|.+.++..+. ... +.. ......|.|++..+. ...+++.|.
T Consensus 76 ~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~----------g~~iLaSgS 145 (568)
T PTZ00420 76 SILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPM----------NYYIMCSSG 145 (568)
T ss_pred CEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCC----------CCeEEEEEe
Confidence 466666652 33444 3 57888888876432 111 111 112467888888763 234556677
Q ss_pred ecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEc
Q psy7977 377 WTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLD 433 (1225)
Q Consensus 377 w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld 433 (1225)
+ |++|+||++...+.+.....+ ....++.+.. ....|..+..||.+..|.+.
T Consensus 146 ~-DgtIrIWDl~tg~~~~~i~~~--~~V~Slswsp--dG~lLat~s~D~~IrIwD~R 197 (568)
T PTZ00420 146 F-DSFVNIWDIENEKRAFQINMP--KKLSSLKWNI--KGNLLSGTCVGKHMHIIDPR 197 (568)
T ss_pred C-CCeEEEEECCCCcEEEEEecC--CcEEEEEECC--CCCEEEEEecCCEEEEEECC
Confidence 6 999999999865544332221 1223343322 34566777889988887653
No 44
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=93.19 E-value=24 Score=42.29 Aligned_cols=135 Identities=13% Similarity=0.151 Sum_probs=77.8
Q ss_pred cCcEEEEecCCcceeeeecCCCCCcEEEEEec-CCEEEEE-ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCC
Q psy7977 284 PSAAILISTESKARVSSWEPPNGKSISVVSCN-KNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEE 361 (1225)
Q Consensus 284 ~~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n-~~~VlVa-sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~ 361 (1225)
.+.|.++|.++.+.+..+.......+..+... ++++.++ .++.+..+++...+ .+.+.......-++++++
T Consensus 15 ~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~--~v~~i~~G~~~~~i~~s~----- 87 (369)
T PF02239_consen 15 SGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGK--VVATIKVGGNPRGIAVSP----- 87 (369)
T ss_dssp GTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSS--EEEEEE-SSEEEEEEE-------
T ss_pred CCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCccc--EEEEEecCCCcceEEEcC-----
Confidence 46789999887777777764332222223223 6788888 47788777665443 444555666677888864
Q ss_pred CCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCC---CCC-CcccEEEEeeCCeeEEEEEEC-CCcEEEEE
Q psy7977 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLG---GEI-IPRSILMTCFEGHCYLLVALG-DGSMFYFS 431 (1225)
Q Consensus 362 ~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~---~~~-~P~SIll~~l~~~~~LlVGl~-nG~L~~y~ 431 (1225)
..++++++.+.++++.|+...+|+.+...+.. ... -++-..+......+..++.+. .|.+....
T Consensus 88 ------DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVd 156 (369)
T PF02239_consen 88 ------DGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVD 156 (369)
T ss_dssp ------TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEE
T ss_pred ------CCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEE
Confidence 25689999988999999999999887654332 111 123234444444554555554 57775443
No 45
>KOG1407|consensus
Probab=92.98 E-value=14 Score=41.71 Aligned_cols=202 Identities=12% Similarity=0.156 Sum_probs=104.9
Q ss_pred CcEEEEecCCcceeeeecCCCCCcEEEEEecCCEEEEE-ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCC
Q psy7977 285 SAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETS 363 (1225)
Q Consensus 285 ~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n~~~VlVa-sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~ 363 (1225)
+.||+.+...++.+.......|.-+...+-.+.|+++. .+..|..+...+.+ .....++..++--++-.
T Consensus 87 k~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~--~~~~~~~~~e~ne~~w~-------- 156 (313)
T KOG1407|consen 87 KTIRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYK--IVNEEQFKFEVNEISWN-------- 156 (313)
T ss_pred ceEEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccc--eeehhcccceeeeeeec--------
Confidence 34555554443444433322222233444455666666 45666666544322 22334444455444332
Q ss_pred CccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeC-CeeEEEEEECCCcEEEEEEcCCCCccccc
Q psy7977 364 SEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-GHCYLLVALGDGSMFYFSLDPASGRLTDK 442 (1225)
Q Consensus 364 ~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~-~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~ 442 (1225)
.++-+++.+...|+|+|++.|.|+.+.+ + .+-|....-++++ .+-|+-+|-.|-.+--+.++ +|-.-
T Consensus 157 ----~~nd~Fflt~GlG~v~ILsypsLkpv~s--i--~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~----ELiC~ 224 (313)
T KOG1407|consen 157 ----NSNDLFFLTNGLGCVEILSYPSLKPVQS--I--KAHPSNCICIEFDPDGRYFATGSADALVSLWDVD----ELICE 224 (313)
T ss_pred ----CCCCEEEEecCCceEEEEeccccccccc--c--ccCCcceEEEEECCCCceEeeccccceeeccChh----Hhhhh
Confidence 1334666666569999999999988754 2 1333332223443 45788888888766555544 23322
Q ss_pred eeeeecCccceEEEEeeCCceEEEEecCCcEEEEEcCCeeEEeecccccccccccCCCCCCCCeEEEEeC-CeEEEEEEc
Q psy7977 443 KKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLALATD-STFTFGTID 521 (1225)
Q Consensus 443 k~~~LG~~pV~L~~~~~~g~~~Vfa~sdrP~liyss~g~l~~~pl~~~~v~~~s~F~se~~p~glv~vs~-~~LrI~~i~ 521 (1225)
|...==--|||-..| +.+|++. +.+++ -.+-|+.++
T Consensus 225 R~isRldwpVRTlSF-------------------S~dg~~l------------------------ASaSEDh~IDIA~ve 261 (313)
T KOG1407|consen 225 RCISRLDWPVRTLSF-------------------SHDGRML------------------------ASASEDHFIDIAEVE 261 (313)
T ss_pred eeeccccCceEEEEe-------------------ccCccee------------------------eccCccceEEeEecc
Confidence 211100123332222 2222211 11111 134455554
Q ss_pred CCCCeeeEEEeCCCcccEEEEecCCCEEEEEE
Q psy7977 522 EIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 522 ~~~~l~ir~IpLg~TprrIay~p~s~~~vV~t 553 (1225)
.-.+ +-.||-...--.+|+||....++-+|
T Consensus 262 tGd~--~~eI~~~~~t~tVAWHPk~~LLAyA~ 291 (313)
T KOG1407|consen 262 TGDR--VWEIPCEGPTFTVAWHPKRPLLAYAC 291 (313)
T ss_pred cCCe--EEEeeccCCceeEEecCCCceeeEEe
Confidence 4333 34577777778899999999999999
No 46
>KOG0306|consensus
Probab=92.83 E-value=36 Score=43.39 Aligned_cols=242 Identities=17% Similarity=0.202 Sum_probs=121.9
Q ss_pred EeeeeccccceeeEEeeccccCCccEEEEEecCCCccEEEEee----cceeeEEEEeeCCCc-ceEeEeeeCCCCCCccE
Q psy7977 161 MESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRN----GIGIEEHACIDLPGI-KGIWALSIGSPKNLDNT 235 (1225)
Q Consensus 161 ~d~l~NlgPI~D~~v~d~~~~~~~qLva~sG~g~~GsLrilR~----GI~~~~~~s~eLpgv-~~iWtl~~~~~~~~d~y 235 (1225)
++++....-|.++.+....+.. ..+|..+- +.=.+-.+.. ...+.....++++|- ..+-++..++ ++.
T Consensus 314 ~~~ir~~~kiks~dv~~~~~~~-~~lv~l~n--Ntv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~----d~~ 386 (888)
T KOG0306|consen 314 LETIRTSAKIKSFDVTPSGGTE-NTLVLLAN--NTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSS----DSI 386 (888)
T ss_pred HHheechhheeEEEEEecCCcc-eeEEEeec--CceEEEEeccCCCCCccccccceeeeccchhheeEEEeec----Cce
Confidence 5566666777788777643322 33443211 1111111111 133444555677765 3666666653 567
Q ss_pred EEEEcCCceEEEEEcCceeeeeccCCcccccCeEEEEee--CCCeEEEEccCc-EEEEecCCcceeeeecCCCCCcEEEE
Q psy7977 236 LVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNV--DPRTVLQVTPSA-AILISTESKARVSSWEPPNGKSISVV 312 (1225)
Q Consensus 236 LVlSf~~~T~Vl~i~ge~veEv~~sgF~~~~~TL~ag~l--~~~~iVQVT~~~-IRli~~~~~~~i~eW~~p~g~~Iv~A 312 (1225)
++.|-.+++..+=- -+....+.- + +.. -++|..+ ++..||-=+.+| +-+++..+...+-..++-+| .|=.-
T Consensus 387 ~~~Sga~~SikiWn-~~t~kciRT--i-~~~-y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdg-aIWsi 460 (888)
T KOG0306|consen 387 LLASGAGESIKIWN-RDTLKCIRT--I-TCG-YILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDG-AIWSI 460 (888)
T ss_pred eeeecCCCcEEEEE-ccCcceeEE--e-ccc-cEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhcccc-ceeee
Confidence 88888877764432 222333210 0 011 2333444 344666666666 55666543222222222122 12111
Q ss_pred Ee-c-CCEEEEE-ECCeEEEE--Eeec---c------ceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEec
Q psy7977 313 SC-N-KNQVLCA-TGCDVYYL--EVHG---S------EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWT 378 (1225)
Q Consensus 313 s~-n-~~~VlVa-sgg~Lv~f--eid~---~------~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~ 378 (1225)
+. . +...+.+ .+..+.+. ++-. + .|.+....+++.+|.|++++|- ..++|||+-
T Consensus 461 ~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spd-----------gk~LaVsLL- 528 (888)
T KOG0306|consen 461 SLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPD-----------GKLLAVSLL- 528 (888)
T ss_pred eecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCC-----------CcEEEEEec-
Confidence 11 1 2222333 44444432 3221 1 1334455678999999999863 579999998
Q ss_pred CCeEEEEeCCCcce---EEeecCCCCCCcccEEEEeeC-CeeEEEEEECCCcEEEEEEcC
Q psy7977 379 DISARLLSLPSLEE---VCKEPLGGEIIPRSILMTCFE-GHCYLLVALGDGSMFYFSLDP 434 (1225)
Q Consensus 379 d~tv~IlsL~~Le~---v~~~~L~~~~~P~SIll~~l~-~~~~LlVGl~nG~L~~y~ld~ 434 (1225)
|+++.||.+++|+- ++...|| ++-.++. ++..++-|..|-.+-.+-+|-
T Consensus 529 dnTVkVyflDtlKFflsLYGHkLP-------V~smDIS~DSklivTgSADKnVKiWGLdF 581 (888)
T KOG0306|consen 529 DNTVKVYFLDTLKFFLSLYGHKLP-------VLSMDISPDSKLIVTGSADKNVKIWGLDF 581 (888)
T ss_pred cCeEEEEEecceeeeeeecccccc-------eeEEeccCCcCeEEeccCCCceEEecccc
Confidence 99999999998764 3334554 1112221 233445556666666655554
No 47
>KOG1036|consensus
Probab=91.99 E-value=28 Score=40.14 Aligned_cols=128 Identities=11% Similarity=0.173 Sum_probs=75.3
Q ss_pred cCcEEEEecCCcceeeeecCCCCCcEEEEEecC-CEEEEE-ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCC
Q psy7977 284 PSAAILISTESKARVSSWEPPNGKSISVVSCNK-NQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEE 361 (1225)
Q Consensus 284 ~~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n~-~~VlVa-sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~ 361 (1225)
..++|+++..........+ .+.++..|+..+ ..++.. .+++|..+++..+.-..+.. -+.-|.|+.-...
T Consensus 34 DgslrlYdv~~~~l~~~~~--~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~~igt--h~~~i~ci~~~~~---- 105 (323)
T KOG1036|consen 34 DGSLRLYDVPANSLKLKFK--HGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNEDQIGT--HDEGIRCIEYSYE---- 105 (323)
T ss_pred cCcEEEEeccchhhhhhee--cCCceeeeeccCCceEEEeccCceEEEEEecCCcceeecc--CCCceEEEEeecc----
Confidence 3456666654321112222 344688777776 456665 68999888876542222221 1345778877642
Q ss_pred CCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEc
Q psy7977 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLD 433 (1225)
Q Consensus 362 ~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld 433 (1225)
...++-|.| |++|++|+...-..+. .+ ..+..|=-..+ ....|+||+.+-.++.|.+-
T Consensus 106 -------~~~vIsgsW-D~~ik~wD~R~~~~~~--~~---d~~kkVy~~~v-~g~~LvVg~~~r~v~iyDLR 163 (323)
T KOG1036|consen 106 -------VGCVISGSW-DKTIKFWDPRNKVVVG--TF---DQGKKVYCMDV-SGNRLVVGTSDRKVLIYDLR 163 (323)
T ss_pred -------CCeEEEccc-CccEEEEecccccccc--cc---ccCceEEEEec-cCCEEEEeecCceEEEEEcc
Confidence 456788999 9999999986411111 11 12222221222 34679999999999999864
No 48
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=91.49 E-value=38 Score=40.63 Aligned_cols=127 Identities=12% Similarity=0.142 Sum_probs=74.7
Q ss_pred cCcEEEEecCCcceeeeecCCCCCcEEEEEecCCEEEEE-ECCeEEEEEeeccceeEEeeeccCce-eEEEEeccCCCCC
Q psy7977 284 PSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYE-VACLDISPLSNEE 361 (1225)
Q Consensus 284 ~~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n~~~VlVa-sgg~Lv~feid~~~L~ev~~~~l~~e-IScLai~~~~~~~ 361 (1225)
...+..++..+++. .|+.+.+. .......+..|.+. .++.++.++..+++.. -....+... .++..+
T Consensus 265 ~g~l~ald~~tG~~--~W~~~~~~-~~~~~~~~~~vy~~~~~g~l~ald~~tG~~~-W~~~~~~~~~~~sp~v------- 333 (394)
T PRK11138 265 NGNLVALDLRSGQI--VWKREYGS-VNDFAVDGGRIYLVDQNDRVYALDTRGGVEL-WSQSDLLHRLLTAPVL------- 333 (394)
T ss_pred CCeEEEEECCCCCE--EEeecCCC-ccCcEEECCEEEEEcCCCeEEEEECCCCcEE-EcccccCCCcccCCEE-------
Confidence 34577777765544 47654332 12234567777776 6889998887655321 111111111 111111
Q ss_pred CCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEE
Q psy7977 362 TSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSL 432 (1225)
Q Consensus 362 ~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~l 432 (1225)
....+.++.. +|.++.++..+-+.+....+.......+-++. ...|+|+..+|.|+.++.
T Consensus 334 ------~~g~l~v~~~-~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~----~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 334 ------YNGYLVVGDS-EGYLHWINREDGRFVAQQKVDSSGFLSEPVVA----DDKLLIQARDGTVYAITR 393 (394)
T ss_pred ------ECCEEEEEeC-CCEEEEEECCCCCEEEEEEcCCCcceeCCEEE----CCEEEEEeCCceEEEEeC
Confidence 2356778876 99999999988777777666422233333333 237999999999987753
No 49
>KOG1446|consensus
Probab=91.48 E-value=27 Score=40.28 Aligned_cols=97 Identities=16% Similarity=0.303 Sum_probs=67.0
Q ss_pred eEEEEEEECCCCcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEec
Q psy7977 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIK 1083 (1225)
Q Consensus 1004 ~s~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev~ 1083 (1225)
.|.+.++|.-+.+.++++++++|+--..+ .+.|.- ...|+..|. ..|+|++|.+..++-....+.+--
T Consensus 208 ~s~~~~lDAf~G~~~~tfs~~~~~~~~~~-~a~ftP-ds~Fvl~gs----------~dg~i~vw~~~tg~~v~~~~~~~~ 275 (311)
T KOG1446|consen 208 ASFIYLLDAFDGTVKSTFSGYPNAGNLPL-SATFTP-DSKFVLSGS----------DDGTIHVWNLETGKKVAVLRGPNG 275 (311)
T ss_pred CCcEEEEEccCCcEeeeEeeccCCCCcce-eEEECC-CCcEEEEec----------CCCcEEEEEcCCCcEeeEecCCCC
Confidence 37899999999999999999999875543 344532 335666663 268999999976655544444445
Q ss_pred CceeeeccccCe--EEEEeCCEEEEEEcCCCc
Q psy7977 1084 GACYSMCEFNGK--LLASINSTVRLFEWTNEK 1113 (1225)
Q Consensus 1084 G~v~al~~f~G~--LLa~vg~~l~vy~l~~~~ 1113 (1225)
|++.++. |+-+ ..|+..+++..|-..+.+
T Consensus 276 ~~~~~~~-fnP~~~mf~sa~s~l~fw~p~~~~ 306 (311)
T KOG1446|consen 276 GPVSCVR-FNPRYAMFVSASSNLVFWLPDEDA 306 (311)
T ss_pred CCccccc-cCCceeeeeecCceEEEEeccccc
Confidence 6666665 8653 567777778777665443
No 50
>KOG0296|consensus
Probab=91.38 E-value=6.7 Score=45.84 Aligned_cols=157 Identities=15% Similarity=0.185 Sum_probs=106.0
Q ss_pred EEEEecCCCCeEEEEEeee-----eCCCCCCCcceEEEEEEEeCCcEEEEEEEEecCceeeeccc--cCeEEEE--eCCE
Q psy7977 1033 ISSKFGEDPNTYFVLGTAV-----VHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEF--NGKLLAS--INST 1103 (1225)
Q Consensus 1033 ~~v~~~~~~~~~lvVGTa~-----~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev~G~v~al~~f--~G~LLa~--vg~~ 1103 (1225)
..+.|.....++|+|+-.- ..+.+|. +-++|++..+. .+...++-|..|+++. | .|-|||. +-.+
T Consensus 56 S~~tF~~H~~svFavsl~P~~~l~aTGGgDD----~AflW~~~~ge-~~~eltgHKDSVt~~~-FshdgtlLATGdmsG~ 129 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSLHPNNNLVATGGGDD----LAFLWDISTGE-FAGELTGHKDSVTCCS-FSHDGTLLATGDMSGK 129 (399)
T ss_pred ceeehhhcCCceEEEEeCCCCceEEecCCCc----eEEEEEccCCc-ceeEecCCCCceEEEE-EccCceEEEecCCCcc
Confidence 3466666666778777652 2222121 44688888765 3444567788999854 5 6888885 7789
Q ss_pred EEEEEcCCCceeeeeecccceeEEEEEE--EECCEEEEeeccccEEEEEEecCCCeEEEEeccCCCceeEEEEeeeCC-c
Q psy7977 1104 VRLFEWTNEKELRLECSHFNNIIALFLK--VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE-L 1180 (1225)
Q Consensus 1104 l~vy~l~~~~~L~~e~~~~~~~i~~~l~--~~g~~IlvGD~~kSv~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~d-t 1180 (1225)
|+||+...++.-..-...... ..++. ..+..+++|+-==|+|+.+-..+ ...-.++- +..-||+.+|+.++ .
T Consensus 130 v~v~~~stg~~~~~~~~e~~d--ieWl~WHp~a~illAG~~DGsvWmw~ip~~-~~~kv~~G--h~~~ct~G~f~pdGKr 204 (399)
T KOG0296|consen 130 VLVFKVSTGGEQWKLDQEVED--IEWLKWHPRAHILLAGSTDGSVWMWQIPSQ-ALCKVMSG--HNSPCTCGEFIPDGKR 204 (399)
T ss_pred EEEEEcccCceEEEeecccCc--eEEEEecccccEEEeecCCCcEEEEECCCc-ceeeEecC--CCCCcccccccCCCce
Confidence 999999877643310011122 24444 46788999999999999776543 45555555 56678999999887 7
Q ss_pred EEEEcCCCcEEEEEeCCCCC
Q psy7977 1181 FLGAENSYNLFICQKDSAAT 1200 (1225)
Q Consensus 1181 ~l~aD~~gNl~vl~~~~~~~ 1200 (1225)
++.++.+|.|.+...-...|
T Consensus 205 ~~tgy~dgti~~Wn~ktg~p 224 (399)
T KOG0296|consen 205 ILTGYDDGTIIVWNPKTGQP 224 (399)
T ss_pred EEEEecCceEEEEecCCCce
Confidence 88899999999887765554
No 51
>KOG1274|consensus
Probab=90.94 E-value=63 Score=42.19 Aligned_cols=221 Identities=18% Similarity=0.180 Sum_probs=126.4
Q ss_pred CCCcEEEEEecCCEEEEE-ECCeEEEEEeecccee-EEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeE
Q psy7977 305 NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIK-QLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISA 382 (1225)
Q Consensus 305 ~g~~Iv~As~n~~~VlVa-sgg~Lv~feid~~~L~-ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv 382 (1225)
.|..|.+.+++..+++.+ .++.+..+.+++++-. -+.+.+++ +.|+++.- ...++|.|.. |-.|
T Consensus 55 ~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp--~r~~~v~g-----------~g~~iaagsd-D~~v 120 (933)
T KOG1274|consen 55 SGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDTILARFTLP--IRDLAVSG-----------SGKMIAAGSD-DTAV 120 (933)
T ss_pred cCceeEEEeecccceEEeeccceEEEeeCCCCCccceeeeeecc--ceEEEEec-----------CCcEEEeecC-ceeE
Confidence 456788888888888877 6888988888765322 23344443 44555532 2568888987 9999
Q ss_pred EEEeCCCcceEEe-ecCCCCCCcccEEEEee-CCeeEEEEEECCCcEEEEEEcCCCCccccce------eeeecCccceE
Q psy7977 383 RLLSLPSLEEVCK-EPLGGEIIPRSILMTCF-EGHCYLLVALGDGSMFYFSLDPASGRLTDKK------KVTLGTQPTVL 454 (1225)
Q Consensus 383 ~IlsL~~Le~v~~-~~L~~~~~P~SIll~~l-~~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k------~~~LG~~pV~L 454 (1225)
.++++.+...... .... . .++-+.+ +...+|-+.+-||.|..|.++. +.++.+- .-+.-++++.-
T Consensus 121 K~~~~~D~s~~~~lrgh~--a---pVl~l~~~p~~~fLAvss~dG~v~iw~~~~--~~~~~tl~~v~k~n~~~~s~i~~~ 193 (933)
T KOG1274|consen 121 KLLNLDDSSQEKVLRGHD--A---PVLQLSYDPKGNFLAVSSCDGKVQIWDLQD--GILSKTLTGVDKDNEFILSRICTR 193 (933)
T ss_pred EEEeccccchheeecccC--C---ceeeeeEcCCCCEEEEEecCceEEEEEccc--chhhhhcccCCccccccccceeee
Confidence 9999987544322 2221 1 2333333 3568899999999999999874 3332221 11111233322
Q ss_pred EEEeeCCceEEEEecCCcEEEEEcCCeeEEeecccccccc---cccCCCCCCCCeEEEEe-CCeEEEEEEcCCCCeeeEE
Q psy7977 455 KTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNH---MCSLNAESYPDSLALAT-DSTFTFGTIDEIQKLHIRT 530 (1225)
Q Consensus 455 ~~~~~~g~~~Vfa~sdrP~liyss~g~l~~~pl~~~~v~~---~s~F~se~~p~glv~vs-~~~LrI~~i~~~~~l~ir~ 530 (1225)
-...-.|..-.+.+.+.--.+|+.++--....+..+..++ .+.| ..|+..++..+ ++.+.|-..+.. -|
T Consensus 194 ~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~w--sPnG~YiAAs~~~g~I~vWnv~t~----~~- 266 (933)
T KOG1274|consen 194 LAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQW--SPNGKYIAASTLDGQILVWNVDTH----ER- 266 (933)
T ss_pred eeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEE--cCCCcEEeeeccCCcEEEEecccc----hh-
Confidence 2233344455555666666677755432222222232222 2223 23444555543 467777666652 22
Q ss_pred EeCCCcccEEEEecCCCEEEEEE
Q psy7977 531 VPLGEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 531 IpLg~TprrIay~p~s~~~vV~t 553 (1225)
=.-++.+..++++|..+..-+.+
T Consensus 267 ~~~~~~Vc~~aw~p~~n~it~~~ 289 (933)
T KOG1274|consen 267 HEFKRAVCCEAWKPNANAITLIT 289 (933)
T ss_pred ccccceeEEEecCCCCCeeEEEe
Confidence 11245778888898888776665
No 52
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=89.82 E-value=37 Score=37.71 Aligned_cols=214 Identities=8% Similarity=0.134 Sum_probs=96.9
Q ss_pred CCEEEEE--ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceE
Q psy7977 316 KNQVLCA--TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEV 393 (1225)
Q Consensus 316 ~~~VlVa--sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v 393 (1225)
+..++++ .++.+..++.+.+++.. .......+.++++.+ ..+.++++...++++++|++.+.+.+
T Consensus 42 g~~l~~~~~~~~~v~~~d~~~~~~~~--~~~~~~~~~~~~~~~-----------~g~~l~~~~~~~~~l~~~d~~~~~~~ 108 (300)
T TIGR03866 42 GKLLYVCASDSDTIQVIDLATGEVIG--TLPSGPDPELFALHP-----------NGKILYIANEDDNLVTVIDIETRKVL 108 (300)
T ss_pred CCEEEEEECCCCeEEEEECCCCcEEE--eccCCCCccEEEECC-----------CCCEEEEEcCCCCeEEEEECCCCeEE
Confidence 3344443 35677777765443321 122223344555543 13456666666899999999875544
Q ss_pred EeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCccccceeeeecCccceEEEEeeCCceEEEEecCCc-
Q psy7977 394 CKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRP- 472 (1225)
Q Consensus 394 ~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~~g~~~Vfa~sdrP- 472 (1225)
..... ...|.++.+.. +..++.++..++..+.+ ++..++++. +....+..|..+ .+..+| ..+++.++..
T Consensus 109 ~~~~~--~~~~~~~~~~~--dg~~l~~~~~~~~~~~~-~d~~~~~~~--~~~~~~~~~~~~-~~s~dg-~~l~~~~~~~~ 179 (300)
T TIGR03866 109 AEIPV--GVEPEGMAVSP--DGKIVVNTSETTNMAHF-IDTKTYEIV--DNVLVDQRPRFA-EFTADG-KELWVSSEIGG 179 (300)
T ss_pred eEeeC--CCCcceEEECC--CCCEEEEEecCCCeEEE-EeCCCCeEE--EEEEcCCCccEE-EECCCC-CEEEEEcCCCC
Confidence 43322 23455655542 34567777776654332 343333321 111223333221 222222 3344444322
Q ss_pred -EEEEEcC-Cee-EEeecccccc--cccccCCCCCCCCe-EEEE---eCCeEEEEEEcCCCCeeeEEEeCCCcccEEEEe
Q psy7977 473 -TVIYSSN-HKL-VFSNVNLRQV--NHMCSLNAESYPDS-LALA---TDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQ 543 (1225)
Q Consensus 473 -~liyss~-g~l-~~~pl~~~~v--~~~s~F~se~~p~g-lv~v---s~~~LrI~~i~~~~~l~ir~IpLg~TprrIay~ 543 (1225)
..++..+ ++. .-........ ..+.+......|++ .+++ .++.+.+..+.. .-..+.++.+..+..++++
T Consensus 180 ~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~--~~~~~~~~~~~~~~~~~~~ 257 (300)
T TIGR03866 180 TVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKT--YEVLDYLLVGQRVWQLAFT 257 (300)
T ss_pred EEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCC--CcEEEEEEeCCCcceEEEC
Confidence 2233322 211 1111110000 01111111112222 2232 234565554432 2223456678889999999
Q ss_pred cCCCEEEEEE
Q psy7977 544 ESSQTFGVIT 553 (1225)
Q Consensus 544 p~s~~~vV~t 553 (1225)
|..+.++++.
T Consensus 258 ~~g~~l~~~~ 267 (300)
T TIGR03866 258 PDEKYLLTTN 267 (300)
T ss_pred CCCCEEEEEc
Confidence 9998776653
No 53
>KOG0299|consensus
Probab=89.75 E-value=39 Score=40.83 Aligned_cols=101 Identities=16% Similarity=0.230 Sum_probs=60.0
Q ss_pred CCcEEEEEec-CCEEEEE-ECCeEEEEEeeccc-e--eEEee--------eccCceeEEEEeccCCCCCCCCccccCcEE
Q psy7977 306 GKSISVVSCN-KNQVLCA-TGCDVYYLEVHGSE-I--KQLAH--------RALEYEVACLDISPLSNEETSSEPAKAQLA 372 (1225)
Q Consensus 306 g~~Iv~As~n-~~~VlVa-sgg~Lv~feid~~~-L--~ev~~--------~~l~~eIScLai~~~~~~~~~~~~~~s~~l 372 (1225)
+..|-+++.. +...+.- ++|+|.+..+-... | ..+.+ ..-+.||++|++.+ .++.+
T Consensus 327 ~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~-----------~sdL~ 395 (479)
T KOG0299|consen 327 EGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIP-----------GSDLL 395 (479)
T ss_pred CCCeeeEEEecccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecc-----------cCceE
Confidence 4467666654 5555554 78999887654321 1 11111 11124999999875 47899
Q ss_pred EEEEecCCeEEEEeCCC----cceEEeecCCCCCCcccEEEEeeCCeeEEEEEE
Q psy7977 373 AVGLWTDISARLLSLPS----LEEVCKEPLGGEIIPRSILMTCFEGHCYLLVAL 422 (1225)
Q Consensus 373 aVG~w~d~tv~IlsL~~----Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl 422 (1225)
|-|.| +|.|++|...+ +++++.-++. ....++++..- .-.+++|+
T Consensus 396 asGS~-~G~vrLW~i~~g~r~i~~l~~ls~~--GfVNsl~f~~s--gk~ivagi 444 (479)
T KOG0299|consen 396 ASGSW-SGCVRLWKIEDGLRAINLLYSLSLV--GFVNSLAFSNS--GKRIVAGI 444 (479)
T ss_pred EecCC-CCceEEEEecCCccccceeeecccc--cEEEEEEEccC--CCEEEEec
Confidence 99999 99999999963 3444433332 23345655432 23567764
No 54
>PTZ00421 coronin; Provisional
Probab=89.53 E-value=65 Score=40.21 Aligned_cols=112 Identities=12% Similarity=0.053 Sum_probs=67.6
Q ss_pred cEEEEEec--CC-EEEEE-ECCeEEEEEeecccee-----EEee-eccCceeEEEEeccCCCCCCCCccccCcEEEEEEe
Q psy7977 308 SISVVSCN--KN-QVLCA-TGCDVYYLEVHGSEIK-----QLAH-RALEYEVACLDISPLSNEETSSEPAKAQLAAVGLW 377 (1225)
Q Consensus 308 ~Iv~As~n--~~-~VlVa-sgg~Lv~feid~~~L~-----ev~~-~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w 377 (1225)
.|...+.+ ++ +++.+ .++.|.++++....+. .+.. ..-...|.|++..+. ..++++.|.+
T Consensus 77 ~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~----------~~~iLaSgs~ 146 (493)
T PTZ00421 77 PIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPS----------AMNVLASAGA 146 (493)
T ss_pred CEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcC----------CCCEEEEEeC
Confidence 57766665 33 44444 5788988888654321 1111 112467889988653 2467888888
Q ss_pred cCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEc
Q psy7977 378 TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLD 433 (1225)
Q Consensus 378 ~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld 433 (1225)
|++|+||++.+-+.+....-. .....++.+.. ...+|..|..||.+..|.+.
T Consensus 147 -DgtVrIWDl~tg~~~~~l~~h-~~~V~sla~sp--dG~lLatgs~Dg~IrIwD~r 198 (493)
T PTZ00421 147 -DMVVNVWDVERGKAVEVIKCH-SDQITSLEWNL--DGSLLCTTSKDKKLNIIDPR 198 (493)
T ss_pred -CCEEEEEECCCCeEEEEEcCC-CCceEEEEEEC--CCCEEEEecCCCEEEEEECC
Confidence 999999999764433321110 11123343332 34678889999999887654
No 55
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=89.23 E-value=62 Score=39.53 Aligned_cols=207 Identities=13% Similarity=0.151 Sum_probs=127.3
Q ss_pred eeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCee
Q psy7977 337 IKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHC 416 (1225)
Q Consensus 337 L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~ 416 (1225)
|..+-.-.+....-.+...+++.. ...++++|=.- ||++.+|.=+.. .+..-|+...+|.-++.+. ...
T Consensus 119 L~~~yeh~l~~~a~nm~~G~Fgg~------~~~~~IcVQS~-DG~L~~feqe~~--~f~~~lp~~llPgPl~Y~~--~tD 187 (418)
T PF14727_consen 119 LELIYEHSLQRTAYNMCCGPFGGV------KGRDFICVQSM-DGSLSFFEQESF--AFSRFLPDFLLPGPLCYCP--RTD 187 (418)
T ss_pred EEEEEEEecccceeEEEEEECCCC------CCceEEEEEec-CceEEEEeCCcE--EEEEEcCCCCCCcCeEEee--cCC
Confidence 444433445444445666666432 12467777765 999999876542 2344555445677777764 345
Q ss_pred EEEEEECCCcEEEEEEcCC---CC----------------ccccceeeeecCccceEEEEeeC-CceEEEEecCCcEEEE
Q psy7977 417 YLLVALGDGSMFYFSLDPA---SG----------------RLTDKKKVTLGTQPTVLKTFRSL-STTNVFACSDRPTVIY 476 (1225)
Q Consensus 417 ~LlVGl~nG~L~~y~ld~~---sg----------------~Ls~~k~~~LG~~pV~L~~~~~~-g~~~Vfa~sdrP~liy 476 (1225)
.+++...+..|..|+.... +. .+....+-.+|-..+.+..++.. ..+.|+++|+|..++.
T Consensus 188 sfvt~sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nlGE~~l~i~v~~~~~~~~~IvvLger~Lf~l 267 (418)
T PF14727_consen 188 SFVTASSSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNLGEQALDIQVVRFSSSESDIVVLGERSLFCL 267 (418)
T ss_pred EEEEecCceeEEEecHHHhhhccccccccccccccccccccccceeEEECCceeEEEEEEEcCCCCceEEEEecceEEEE
Confidence 6777777889999975211 00 12222346689899888887653 5689999999999999
Q ss_pred EcCCeeEEee-cccccccccccCCCC--CCCC---eEEE-EeCCeEEEEEEcCC--------CCeeeEEEeCCCcccEEE
Q psy7977 477 SSNHKLVFSN-VNLRQVNHMCSLNAE--SYPD---SLAL-ATDSTFTFGTIDEI--------QKLHIRTVPLGEAPRRIA 541 (1225)
Q Consensus 477 ss~g~l~~~p-l~~~~v~~~s~F~se--~~p~---glv~-vs~~~LrI~~i~~~--------~~l~ir~IpLg~TprrIa 541 (1225)
+.+|.+++.. +.+. ..++++|... .-++ .++. .+++.|.|.+=..+ ....++.-.+...+--|+
T Consensus 268 ~~~G~l~~~krLd~~-p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~d~~L~WsA~l~~~PVal~v~~~~~~~G~IV 346 (418)
T PF14727_consen 268 KDNGSLRFQKRLDYN-PSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYEDTTLVWSAQLPHVPVALSVANFNGLKGLIV 346 (418)
T ss_pred cCCCeEEEEEecCCc-eeeEEEEEeecccCCCCceEEEEEecCCeEEEEeCCeEEEecCCCCCCEEEEecccCCCCceEE
Confidence 9999988875 4443 4578888762 2332 2444 45577777763332 123344444555666666
Q ss_pred EecCCCEEEEEEEe
Q psy7977 542 YQESSQTFGVITTR 555 (1225)
Q Consensus 542 y~p~s~~~vV~t~~ 555 (1225)
-....+.+-|.+--
T Consensus 347 ~Ls~~G~L~v~YLG 360 (418)
T PF14727_consen 347 SLSDEGQLSVSYLG 360 (418)
T ss_pred EEcCCCcEEEEEeC
Confidence 66666666665533
No 56
>KOG0296|consensus
Probab=89.16 E-value=47 Score=39.19 Aligned_cols=64 Identities=22% Similarity=0.191 Sum_probs=41.1
Q ss_pred CcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCccc
Q psy7977 369 AQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLT 440 (1225)
Q Consensus 369 s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~Ls 440 (1225)
-..+|+|.- ||+|.||.+.....-+.-.. +..+.=..+.+.+||+-+..||.+.. +|..+|++.
T Consensus 298 lpL~A~G~v-dG~i~iyD~a~~~~R~~c~h-----e~~V~~l~w~~t~~l~t~c~~g~v~~--wDaRtG~l~ 361 (399)
T KOG0296|consen 298 LPLAACGSV-DGTIAIYDLAASTLRHICEH-----EDGVTKLKWLNTDYLLTACANGKVRQ--WDARTGQLK 361 (399)
T ss_pred cchhhcccc-cceEEEEecccchhheeccC-----CCceEEEEEcCcchheeeccCceEEe--eeccccceE
Confidence 467888987 99999999975333221111 11222222334799999999999855 456677663
No 57
>KOG2114|consensus
Probab=89.11 E-value=63 Score=41.99 Aligned_cols=210 Identities=16% Similarity=0.146 Sum_probs=111.2
Q ss_pred cEEEEEecCCEEEEE-ECCeEEEEEeeccceeEEee-eccCc-eeEEEEeccCCCCCCCCccccCcEEEEEEecCC----
Q psy7977 308 SISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAH-RALEY-EVACLDISPLSNEETSSEPAKAQLAAVGLWTDI---- 380 (1225)
Q Consensus 308 ~Iv~As~n~~~VlVa-sgg~Lv~feid~~~L~ev~~-~~l~~-eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~---- 380 (1225)
.|++++.+..-|++. ..|.++.+. ..+..... ...+. .+.-|.+.. ...-.+.||-. ++
T Consensus 27 ~isc~~s~~~~vvigt~~G~V~~Ln---~s~~~~~~fqa~~~siv~~L~~~~----------~~~~L~sv~Ed-~~~np~ 92 (933)
T KOG2114|consen 27 AISCCSSSTGSVVIGTADGRVVILN---SSFQLIRGFQAYEQSIVQFLYILN----------KQNFLFSVGED-EQGNPV 92 (933)
T ss_pred ceeEEcCCCceEEEeeccccEEEec---ccceeeehheecchhhhhHhhccc----------CceEEEEEeec-CCCCce
Confidence 688888888888887 577887653 22222111 11111 233444321 12345556654 33
Q ss_pred eEEEEeCCCc---c-eEEe-------ecCCCCCCccc-EEEEeeCCeeEEEEEECCCcEEEEEEcCCCCccccceeeeec
Q psy7977 381 SARLLSLPSL---E-EVCK-------EPLGGEIIPRS-ILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLG 448 (1225)
Q Consensus 381 tv~IlsL~~L---e-~v~~-------~~L~~~~~P~S-Ill~~l~~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~LG 448 (1225)
.++||+|... + +.+. ...|.+..|-+ +.+.. .-..+.||..||.++.|+=|..-..-+..+-..-|
T Consensus 93 llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~--~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~ 170 (933)
T KOG2114|consen 93 LLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSE--DLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRG 170 (933)
T ss_pred EEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEc--cccEEEEEecCcEEEEEcCcchhccccceeeeccC
Confidence 6899999632 1 2111 12222233433 44332 24678999999999999855421111111122347
Q ss_pred CccceEEEEeeCCceEEEEecCCcEEEEEcCCee-EEeecccccccccccCCCCCCC--CeEEEEeCCeEEEEEEcCCCC
Q psy7977 449 TQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKL-VFSNVNLRQVNHMCSLNAESYP--DSLALATDSTFTFGTIDEIQK 525 (1225)
Q Consensus 449 ~~pV~L~~~~~~g~~~Vfa~sdrP~liyss~g~l-~~~pl~~~~v~~~s~F~se~~p--~glv~vs~~~LrI~~i~~~~~ 525 (1225)
..|+.=-.+...+.+.+|+....--..|+-.|+. ..--++...+. -+++..++ ..||++.++.|.+..-+..
T Consensus 171 ~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~---lnCss~~~~t~qfIca~~e~l~fY~sd~~-- 245 (933)
T KOG2114|consen 171 KEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGIS---LNCSSFSDGTYQFICAGSEFLYFYDSDGR-- 245 (933)
T ss_pred CCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCcc---ceeeecCCCCccEEEecCceEEEEcCCCc--
Confidence 7788755666666666888776665666543433 22112211111 11122222 2588888899999887743
Q ss_pred eeeEEEeCCCccc
Q psy7977 526 LHIRTVPLGEAPR 538 (1225)
Q Consensus 526 l~ir~IpLg~Tpr 538 (1225)
=+.-..++|+.-.
T Consensus 246 ~~cfaf~~g~kk~ 258 (933)
T KOG2114|consen 246 GPCFAFEVGEKKE 258 (933)
T ss_pred ceeeeecCCCeEE
Confidence 2444556666543
No 58
>KOG0289|consensus
Probab=88.86 E-value=48 Score=39.86 Aligned_cols=143 Identities=14% Similarity=0.141 Sum_probs=81.6
Q ss_pred eEEEEccCcEEEEecCCc-----------ceeeeecC-CCCCcEEEEEecCCEEEEE---ECCeEEEEEeeccceeEEee
Q psy7977 278 TVLQVTPSAAILISTESK-----------ARVSSWEP-PNGKSISVVSCNKNQVLCA---TGCDVYYLEVHGSEIKQLAH 342 (1225)
Q Consensus 278 ~iVQVT~~~IRli~~~~~-----------~~i~eW~~-p~g~~Iv~As~n~~~VlVa---sgg~Lv~feid~~~L~ev~~ 342 (1225)
..+|.++++=.++..... ..+..-.. ..+..+++|.+...-+++. .++.+-++++.+.. .+.+
T Consensus 307 ~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~--~~a~ 384 (506)
T KOG0289|consen 307 TGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQT--NVAK 384 (506)
T ss_pred eeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCcc--cccc
Confidence 567777777766654321 11111111 1233466677765555554 46777777765432 2233
Q ss_pred ec-cCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEE
Q psy7977 343 RA-LEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVA 421 (1225)
Q Consensus 343 ~~-l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVG 421 (1225)
.+ -...|..+++++ ...|+++++. |++|++|.|..++..-+..++...-..++.+-+ .+.||.++
T Consensus 385 Fpght~~vk~i~FsE-----------NGY~Lat~ad-d~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~--SGt~L~~~ 450 (506)
T KOG0289|consen 385 FPGHTGPVKAISFSE-----------NGYWLATAAD-DGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQ--SGTYLGIA 450 (506)
T ss_pred CCCCCCceeEEEecc-----------CceEEEEEec-CCeEEEEEehhhcccceeeccccccceeEEEcC--CCCeEEee
Confidence 22 246777777754 4789999997 999999999876644333443211123444332 34677777
Q ss_pred ECCCcEEEEEEcCCCCc
Q psy7977 422 LGDGSMFYFSLDPASGR 438 (1225)
Q Consensus 422 l~nG~L~~y~ld~~sg~ 438 (1225)
.-.|..|..+..+.+
T Consensus 451 --g~~l~Vy~~~k~~k~ 465 (506)
T KOG0289|consen 451 --GSDLQVYICKKKTKS 465 (506)
T ss_pred --cceeEEEEEeccccc
Confidence 555777777654433
No 59
>PLN00181 protein SPA1-RELATED; Provisional
Probab=88.80 E-value=94 Score=41.07 Aligned_cols=130 Identities=12% Similarity=0.177 Sum_probs=78.5
Q ss_pred CcEEEEecCCcceeeeecCCCCCcEEEEEec--CCEEEE-E-ECCeEEEEEeeccc-eeEEeeeccCceeEEEEeccCCC
Q psy7977 285 SAAILISTESKARVSSWEPPNGKSISVVSCN--KNQVLC-A-TGCDVYYLEVHGSE-IKQLAHRALEYEVACLDISPLSN 359 (1225)
Q Consensus 285 ~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n--~~~VlV-a-sgg~Lv~feid~~~-L~ev~~~~l~~eIScLai~~~~~ 359 (1225)
..|++.+...++.+..+.. ....|.+.+.+ ++.+++ + .++.+.++++..+. +..+ .....+.|++..+
T Consensus 555 g~v~lWd~~~~~~~~~~~~-H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~---~~~~~v~~v~~~~--- 627 (793)
T PLN00181 555 GVVQVWDVARSQLVTEMKE-HEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI---KTKANICCVQFPS--- 627 (793)
T ss_pred CeEEEEECCCCeEEEEecC-CCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEE---ecCCCeEEEEEeC---
Confidence 4567777665555555543 33468777775 344444 4 57899999887542 2222 2234677887643
Q ss_pred CCCCCccccCcEEEEEEecCCeEEEEeCCCcce-EEeecCCC-CCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcC
Q psy7977 360 EETSSEPAKAQLAAVGLWTDISARLLSLPSLEE-VCKEPLGG-EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDP 434 (1225)
Q Consensus 360 ~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~-v~~~~L~~-~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~ 434 (1225)
....++++|.. |++|++|++..... +.. +.+ .....++.+ ....+|+.+..||.+..|.+..
T Consensus 628 -------~~g~~latgs~-dg~I~iwD~~~~~~~~~~--~~~h~~~V~~v~f---~~~~~lvs~s~D~~ikiWd~~~ 691 (793)
T PLN00181 628 -------ESGRSLAFGSA-DHKVYYYDLRNPKLPLCT--MIGHSKTVSYVRF---VDSSTLVSSSTDNTLKLWDLSM 691 (793)
T ss_pred -------CCCCEEEEEeC-CCeEEEEECCCCCccceE--ecCCCCCEEEEEE---eCCCEEEEEECCCEEEEEeCCC
Confidence 12568899987 99999999965331 211 110 111123333 2346788999999999888753
No 60
>KOG0285|consensus
Probab=88.76 E-value=6.4 Score=45.84 Aligned_cols=71 Identities=21% Similarity=0.206 Sum_probs=51.2
Q ss_pred ceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCC-CCCcccEEEEeeCCeeEEEEEECCC
Q psy7977 347 YEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGG-EIIPRSILMTCFEGHCYLLVALGDG 425 (1225)
Q Consensus 347 ~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~-~~~P~SIll~~l~~~~~LlVGl~nG 425 (1225)
.+|-|+++.|. ..|++-|.- |+++.|+.|.+-....+ |++ -...+.+++.. ..||||....|+
T Consensus 152 gWVr~vavdP~-----------n~wf~tgs~-DrtikIwDlatg~Lklt--ltGhi~~vr~vavS~--rHpYlFs~gedk 215 (460)
T KOG0285|consen 152 GWVRSVAVDPG-----------NEWFATGSA-DRTIKIWDLATGQLKLT--LTGHIETVRGVAVSK--RHPYLFSAGEDK 215 (460)
T ss_pred ceEEEEeeCCC-----------ceeEEecCC-CceeEEEEcccCeEEEe--ecchhheeeeeeecc--cCceEEEecCCC
Confidence 68889999763 578999986 99999999975332221 211 12345565553 469999999999
Q ss_pred cEEEEEEc
Q psy7977 426 SMFYFSLD 433 (1225)
Q Consensus 426 ~L~~y~ld 433 (1225)
.+-.|.+.
T Consensus 216 ~VKCwDLe 223 (460)
T KOG0285|consen 216 QVKCWDLE 223 (460)
T ss_pred eeEEEech
Confidence 99999875
No 61
>KOG1538|consensus
Probab=88.44 E-value=34 Score=42.91 Aligned_cols=54 Identities=17% Similarity=0.425 Sum_probs=34.2
Q ss_pred eecCCCCCcEEEEEe--cCCEEEEEECCeEEEEEeeccce-eEE-eeeccCceeEEEEecc
Q psy7977 300 SWEPPNGKSISVVSC--NKNQVLCATGCDVYYLEVHGSEI-KQL-AHRALEYEVACLDISP 356 (1225)
Q Consensus 300 eW~~p~g~~Iv~As~--n~~~VlVasgg~Lv~feid~~~L-~ev-~~~~l~~eIScLai~~ 356 (1225)
.|+.+....|-..+. .+.|+++|.|+.+++|+..++.+ ... .++ +.|-|++-+.
T Consensus 6 ~~r~~~~hci~d~afkPDGsqL~lAAg~rlliyD~ndG~llqtLKgHK---DtVycVAys~ 63 (1081)
T KOG1538|consen 6 TWRDKAEHCINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHK---DTVYCVAYAK 63 (1081)
T ss_pred hhhcccccchheeEECCCCceEEEecCCEEEEEeCCCccccccccccc---ceEEEEEEcc
Confidence 354444444444444 36789999999999998877643 322 233 4577888865
No 62
>KOG3881|consensus
Probab=88.34 E-value=1.3 Score=51.82 Aligned_cols=112 Identities=23% Similarity=0.356 Sum_probs=79.1
Q ss_pred EEEEEEECCC-CcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEec
Q psy7977 1005 HNLLIIDQNT-FEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIK 1083 (1225)
Q Consensus 1005 s~irlvdp~t-~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev~ 1083 (1225)
+.+|+.|+.. -..+.++.|. |.++|.. .+. ....++.+|++ +|.+-.|+...+|+--..-..+.
T Consensus 226 hqvR~YDt~~qRRPV~~fd~~--E~~is~~--~l~-p~gn~Iy~gn~----------~g~l~~FD~r~~kl~g~~~kg~t 290 (412)
T KOG3881|consen 226 HQVRLYDTRHQRRPVAQFDFL--ENPISST--GLT-PSGNFIYTGNT----------KGQLAKFDLRGGKLLGCGLKGIT 290 (412)
T ss_pred eeEEEecCcccCcceeEeccc--cCcceee--eec-CCCcEEEEecc----------cchhheecccCceeeccccCCcc
Confidence 7899999986 4577777776 5555432 221 23357777864 56667777766565555567889
Q ss_pred Cceeeeccc-cCeEEEEeC--CEEEEEEcCCCceeeeeecccceeEEEEEEEECCEEEEee
Q psy7977 1084 GACYSMCEF-NGKLLASIN--STVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGD 1141 (1225)
Q Consensus 1084 G~v~al~~f-~G~LLa~vg--~~l~vy~l~~~~~L~~e~~~~~~~i~~~l~~~g~~IlvGD 1141 (1225)
|+++++..- ++++||..| .-|||||.+..++|. .+|++++=++|++-|
T Consensus 291 Gsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~----------kvYvKs~lt~il~~~ 341 (412)
T KOG3881|consen 291 GSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLH----------KVYVKSRLTFILLRD 341 (412)
T ss_pred CCcceEEEcCCCceEEeeccceeEEEeecccchhhh----------hhhhhccccEEEecC
Confidence 999999877 458888766 789999999888775 466776667776644
No 63
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=88.29 E-value=46 Score=36.89 Aligned_cols=132 Identities=14% Similarity=0.109 Sum_probs=68.5
Q ss_pred CcEEEEecCCcceeeeecCCCCCcEEEEEecCCEEEEE--ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCC
Q psy7977 285 SAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEET 362 (1225)
Q Consensus 285 ~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n~~~VlVa--sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~ 362 (1225)
+.|++++...++.+..+....+....+.+-.++.++++ .++.+.++++.... .+...+....+.++++.+
T Consensus 53 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~--~~~~~~~~~~~~~~~~~~------ 124 (300)
T TIGR03866 53 DTIQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANEDDNLVTVIDIETRK--VLAEIPVGVEPEGMAVSP------ 124 (300)
T ss_pred CeEEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcCCCCeEEEEECCCCe--EEeEeeCCCCcceEEECC------
Confidence 34666666554444444332222223333344556665 35778888776432 222223334456666654
Q ss_pred CCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEE-CCCcEEEEEEc
Q psy7977 363 SSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVAL-GDGSMFYFSLD 433 (1225)
Q Consensus 363 ~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl-~nG~L~~y~ld 433 (1225)
...+++++......+.++.+.+.+.+..... ...|+++.+.. ...+|+++. .+|.+..|.+.
T Consensus 125 -----dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~s~--dg~~l~~~~~~~~~v~i~d~~ 187 (300)
T TIGR03866 125 -----DGKIVVNTSETTNMAHFIDTKTYEIVDNVLV--DQRPRFAEFTA--DGKELWVSSEIGGTVSVIDVA 187 (300)
T ss_pred -----CCCEEEEEecCCCeEEEEeCCCCeEEEEEEc--CCCccEEEECC--CCCEEEEEcCCCCEEEEEEcC
Confidence 2456777766334577778766544332222 23455554432 334566665 47887777654
No 64
>KOG0647|consensus
Probab=88.22 E-value=56 Score=37.76 Aligned_cols=227 Identities=17% Similarity=0.151 Sum_probs=127.7
Q ss_pred eeeecCCCCCcEEEEEecC--CEEEEE-E-CCeEEEEEeecc-ceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEE
Q psy7977 298 VSSWEPPNGKSISVVSCNK--NQVLCA-T-GCDVYYLEVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLA 372 (1225)
Q Consensus 298 i~eW~~p~g~~Iv~As~n~--~~VlVa-s-gg~Lv~feid~~-~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~l 372 (1225)
..+...|.+.+|..-++.. ..++.| + ++.+-..|+.+. .+.......++..|-|.+-..- ...+
T Consensus 19 d~ev~~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsdd-----------gskV 87 (347)
T KOG0647|consen 19 DYEVPNPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDD-----------GSKV 87 (347)
T ss_pred ceecCCCcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccC-----------CceE
Confidence 3444445455788777764 344445 4 899999999874 5666556677888888887542 3456
Q ss_pred EEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeE--EEEEECCCcEEEEEEcCCCCcccccee---eee
Q psy7977 373 AVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCY--LLVALGDGSMFYFSLDPASGRLTDKKK---VTL 447 (1225)
Q Consensus 373 aVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~--LlVGl~nG~L~~y~ld~~sg~Ls~~k~---~~L 447 (1225)
+.|.- |+.+++|.|..-+. .+-+.- +...+.+-.+. +.+| |.-|.=|-.|-.+ |+|. ..-
T Consensus 88 f~g~~-Dk~~k~wDL~S~Q~-~~v~~H-d~pvkt~~wv~--~~~~~cl~TGSWDKTlKfW----------D~R~~~pv~t 152 (347)
T KOG0647|consen 88 FSGGC-DKQAKLWDLASGQV-SQVAAH-DAPVKTCHWVP--GMNYQCLVTGSWDKTLKFW----------DTRSSNPVAT 152 (347)
T ss_pred Eeecc-CCceEEEEccCCCe-eeeeec-ccceeEEEEec--CCCcceeEecccccceeec----------ccCCCCeeee
Confidence 77775 99999999965322 211111 12223333221 1111 1112111111111 1110 000
Q ss_pred cCccceEEEEeeCCceEEEEecCCcEEEEEcCC-----eeEEeecccccccccccCCCCCCCCeEEEEeCCeEEEEEEcC
Q psy7977 448 GTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNH-----KLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDE 522 (1225)
Q Consensus 448 G~~pV~L~~~~~~g~~~Vfa~sdrP~liyss~g-----~l~~~pl~~~~v~~~s~F~se~~p~glv~vs~~~LrI~~i~~ 522 (1225)
=.-|-|.....+.-.-+|.++++|-.++|.-++ +-.-+||+.. +++++-|.... ...+..-++..-|-.|+.
T Consensus 153 ~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q-~R~va~f~d~~--~~alGsiEGrv~iq~id~ 229 (347)
T KOG0647|consen 153 LQLPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQ-TRCVACFQDKD--GFALGSIEGRVAIQYIDD 229 (347)
T ss_pred eeccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccce-eeEEEEEecCC--ceEeeeecceEEEEecCC
Confidence 001222222223334588999999999997433 2234666655 56777775432 124445678888999987
Q ss_pred C---CCeeeEEE-------eCCCcccEEEEecCCCEEEEEE
Q psy7977 523 I---QKLHIRTV-------PLGEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 523 ~---~~l~ir~I-------pLg~TprrIay~p~s~~~vV~t 553 (1225)
- .++..|-= +.=|.+..|++||..++|+-+-
T Consensus 230 ~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaG 270 (347)
T KOG0647|consen 230 PNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAG 270 (347)
T ss_pred CCccCceeEEEeccCCCCCCceEEecceEeecccceEEEec
Confidence 3 23433321 1236889999999999999886
No 65
>KOG2106|consensus
Probab=88.02 E-value=75 Score=39.00 Aligned_cols=220 Identities=15% Similarity=0.157 Sum_probs=113.5
Q ss_pred ecCCCCCcEEEEEec-CCEEEEE-ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEec
Q psy7977 301 WEPPNGKSISVVSCN-KNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWT 378 (1225)
Q Consensus 301 W~~p~g~~Iv~As~n-~~~VlVa-sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~ 378 (1225)
+..++.+.+.+.++. +.+|+-. ++|.|.+...+...+..... .-+.-|-||.... ++ .++-|--
T Consensus 241 fek~ekk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~-aH~ggv~~L~~lr--~G----------tllSGgK- 306 (626)
T KOG2106|consen 241 FEKREKKFVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVH-AHDGGVFSLCMLR--DG----------TLLSGGK- 306 (626)
T ss_pred cccccceEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEee-ecCCceEEEEEec--Cc----------cEeecCc-
Confidence 333444455555554 4567777 78888877655444444444 4456677776632 11 1222432
Q ss_pred CCeEEEEeCCCcceEEeecCCCCC-CcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCccccceeeeecCccceEEEE
Q psy7977 379 DISARLLSLPSLEEVCKEPLGGEI-IPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF 457 (1225)
Q Consensus 379 d~tv~IlsL~~Le~v~~~~L~~~~-~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~ 457 (1225)
|..|..|+ .+...+....||.+. .||.|+ ++.+-|+||+....++.=.+.... ....+|-.- .|--+
T Consensus 307 DRki~~Wd-~~y~k~r~~elPe~~G~iRtv~----e~~~di~vGTtrN~iL~Gt~~~~f------~~~v~gh~d-elwgl 374 (626)
T KOG2106|consen 307 DRKIILWD-DNYRKLRETELPEQFGPIRTVA----EGKGDILVGTTRNFILQGTLENGF------TLTVQGHGD-ELWGL 374 (626)
T ss_pred cceEEecc-ccccccccccCchhcCCeeEEe----cCCCcEEEeeccceEEEeeecCCc------eEEEEeccc-ceeeE
Confidence 55555554 333333333454322 334332 223338999988887775554211 011122111 11111
Q ss_pred eeCCceEEEEecCC-cEEEEEcCCeeEEeecccccccccccCCCCCCCCeEEE--EeCCeEEEEEEcCCCCeeeEEEeCC
Q psy7977 458 RSLSTTNVFACSDR-PTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYPDSLAL--ATDSTFTFGTIDEIQKLHIRTVPLG 534 (1225)
Q Consensus 458 ~~~g~~~Vfa~sdr-P~liyss~g~l~~~pl~~~~v~~~s~F~se~~p~glv~--vs~~~LrI~~i~~~~~l~ir~IpLg 534 (1225)
...-....|++|.+ -.+-..+..++.++.+..++..+ +.|+ |-|.++ ...+...+...+...-..+++- +
T Consensus 375 a~hps~~q~~T~gqdk~v~lW~~~k~~wt~~~~d~~~~-~~fh----psg~va~Gt~~G~w~V~d~e~~~lv~~~~d--~ 447 (626)
T KOG2106|consen 375 ATHPSKNQLLTCGQDKHVRLWNDHKLEWTKIIEDPAEC-ADFH----PSGVVAVGTATGRWFVLDTETQDLVTIHTD--N 447 (626)
T ss_pred EcCCChhheeeccCcceEEEccCCceeEEEEecCceeE-eecc----CcceEEEeeccceEEEEecccceeEEEEec--C
Confidence 11111223443332 23333447778888776665543 2343 223333 3446666666665333444443 8
Q ss_pred CcccEEEEecCCCEEEEEE
Q psy7977 535 EAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 535 ~TprrIay~p~s~~~vV~t 553 (1225)
+....+.|+|...+++|++
T Consensus 448 ~~ls~v~ysp~G~~lAvgs 466 (626)
T KOG2106|consen 448 EQLSVVRYSPDGAFLAVGS 466 (626)
T ss_pred CceEEEEEcCCCCEEEEec
Confidence 8999999999999999996
No 66
>KOG0266|consensus
Probab=87.97 E-value=49 Score=40.76 Aligned_cols=220 Identities=15% Similarity=0.133 Sum_probs=111.8
Q ss_pred EEEEEec-CCEEEEE--ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEE
Q psy7977 309 ISVVSCN-KNQVLCA--TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLL 385 (1225)
Q Consensus 309 Iv~As~n-~~~VlVa--sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~Il 385 (1225)
|...+.. +...++. .+.+|-.+.+.........-+.....|+|+++.+. ++.++-|.+ |++|+||
T Consensus 206 v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~-----------g~~i~Sgs~-D~tvriW 273 (456)
T KOG0266|consen 206 VSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPD-----------GNLLVSGSD-DGTVRIW 273 (456)
T ss_pred eeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCC-----------CCEEEEecC-CCcEEEE
Confidence 4444443 3334443 57888888873221111122255678899999763 367888888 9999999
Q ss_pred eCCCcceEEeecCCCCCCcccEEEEeeC-CeeEEEEEECCCcEEEEEEcCCCCccccceeeeec-C--ccceEEEEeeCC
Q psy7977 386 SLPSLEEVCKEPLGGEIIPRSILMTCFE-GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLG-T--QPTVLKTFRSLS 461 (1225)
Q Consensus 386 sL~~Le~v~~~~L~~~~~P~SIll~~l~-~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~LG-~--~pV~L~~~~~~g 461 (1225)
++.+-+.+-. |....- .+..+.+. ...+|..+-.||.+..|.+.. ++.. ......+ . +|+....+.-++
T Consensus 274 d~~~~~~~~~--l~~hs~--~is~~~f~~d~~~l~s~s~d~~i~vwd~~~--~~~~-~~~~~~~~~~~~~~~~~~fsp~~ 346 (456)
T KOG0266|consen 274 DVRTGECVRK--LKGHSD--GISGLAFSPDGNLLVSASYDGTIRVWDLET--GSKL-CLKLLSGAENSAPVTSVQFSPNG 346 (456)
T ss_pred eccCCeEEEe--eeccCC--ceEEEEECCCCCEEEEcCCCccEEEEECCC--Ccee-eeecccCCCCCCceeEEEECCCC
Confidence 9987333222 211111 23333343 456788888899999887653 3311 0011111 1 145555554333
Q ss_pred ceEEEEecCC-cEEEEEcC-Ce--eEEeecccccccccccCCCCCCCCe-EEE--EeCCeEEEEEEcCCCCeeeEEEeCC
Q psy7977 462 TTNVFACSDR-PTVIYSSN-HK--LVFSNVNLRQVNHMCSLNAESYPDS-LAL--ATDSTFTFGTIDEIQKLHIRTVPLG 534 (1225)
Q Consensus 462 ~~~Vfa~sdr-P~liyss~-g~--l~~~pl~~~~v~~~s~F~se~~p~g-lv~--vs~~~LrI~~i~~~~~l~ir~IpLg 534 (1225)
..+++.+.. -+-++.-. ++ -.+.+.... . .|.|+....+.+ +++ ..+..+.+..+.. .-...++...
T Consensus 347 -~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s--~~~~~~l~~h 420 (456)
T KOG0266|consen 347 -KYLLSASLDRTLKLWDLRSGKSVGTYTGHSNL-V--RCIFSPTLSTGGKLIYSGSEDGSVYVWDSSS--GGILQRLEGH 420 (456)
T ss_pred -cEEEEecCCCeEEEEEccCCcceeeecccCCc-c--eeEecccccCCCCeEEEEeCCceEEEEeCCc--cchhhhhcCC
Confidence 344444444 44343321 21 223332222 1 233333223222 222 2345666666554 2233333333
Q ss_pred --CcccEEEEecCCCEEEEEE
Q psy7977 535 --EAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 535 --~TprrIay~p~s~~~vV~t 553 (1225)
.....+.+||..+.++-..
T Consensus 421 ~~~~~~~~~~~~~~~~~~s~s 441 (456)
T KOG0266|consen 421 SKAAVSDLSSHPTENLIASSS 441 (456)
T ss_pred CCCceeccccCCCcCeeeecC
Confidence 4557778888888766654
No 67
>KOG0294|consensus
Probab=87.93 E-value=43 Score=38.82 Aligned_cols=210 Identities=15% Similarity=0.112 Sum_probs=112.8
Q ss_pred CcEEEEecCCcceeeeecCCCCCcEEEEEecCCE---EEEE--ECCeEEEEEeeccceeEEee-eccCceeEEEEeccCC
Q psy7977 285 SAAILISTESKARVSSWEPPNGKSISVVSCNKNQ---VLCA--TGCDVYYLEVHGSEIKQLAH-RALEYEVACLDISPLS 358 (1225)
Q Consensus 285 ~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n~~~---VlVa--sgg~Lv~feid~~~L~ev~~-~~l~~eIScLai~~~~ 358 (1225)
..|++||......+...-.+.| +|++.....+. =+++ ++|.|..+..+ ....+.. +.-..+|+-|++-|.
T Consensus 63 etI~IYDm~k~~qlg~ll~Hag-sitaL~F~~~~S~shLlS~sdDG~i~iw~~~--~W~~~~slK~H~~~Vt~lsiHPS- 138 (362)
T KOG0294|consen 63 ETIHIYDMRKRKQLGILLSHAG-SITALKFYPPLSKSHLLSGSDDGHIIIWRVG--SWELLKSLKAHKGQVTDLSIHPS- 138 (362)
T ss_pred CcEEEEeccchhhhcceecccc-ceEEEEecCCcchhheeeecCCCcEEEEEcC--CeEEeeeecccccccceeEecCC-
Confidence 4466776554333333333344 57877776655 4554 68999988765 3444432 334567998988663
Q ss_pred CCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCC--
Q psy7977 359 NEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPAS-- 436 (1225)
Q Consensus 359 ~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~s-- 436 (1225)
.-+|+....|+.++.|+|-....-+...|. ..|+.+... +.+.|..++.+|+..+ |+++...
T Consensus 139 -----------~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~--~~at~v~w~--~~Gd~F~v~~~~~i~i-~q~d~A~v~ 202 (362)
T KOG0294|consen 139 -----------GKLALSVGGDQVLRTWNLVRGRVAFVLNLK--NKATLVSWS--PQGDHFVVSGRNKIDI-YQLDNASVF 202 (362)
T ss_pred -----------CceEEEEcCCceeeeehhhcCccceeeccC--CcceeeEEc--CCCCEEEEEeccEEEE-EecccHhHh
Confidence 336666667999999999665554445553 345444443 3455667777777654 6766431
Q ss_pred CccccceeeeecCccceEEEEeeCCceEEEEecCCcEEEEEcCC-eeEEeec--ccccccccccCCCCCCCCeEEEE-eC
Q psy7977 437 GRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNH-KLVFSNV--NLRQVNHMCSLNAESYPDSLALA-TD 512 (1225)
Q Consensus 437 g~Ls~~k~~~LG~~pV~L~~~~~~g~~~Vfa~sdrP~liyss~g-~l~~~pl--~~~~v~~~s~F~se~~p~glv~v-s~ 512 (1225)
+.+.. |.+..-......+..++-++.-|+...... ..-++-+ ....+..+.+|..+.. .-++-+ ++
T Consensus 203 ~~i~~---------~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~-~~lvTaSSD 272 (362)
T KOG0294|consen 203 REIEN---------PKRILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEH-EYLVTASSD 272 (362)
T ss_pred hhhhc---------cccceeeeecCCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCc-eEEEEeccC
Confidence 11211 222222222233556666777776654322 1111111 1223555565543221 223323 34
Q ss_pred CeEEEEEEcCCC
Q psy7977 513 STFTFGTIDEIQ 524 (1225)
Q Consensus 513 ~~LrI~~i~~~~ 524 (1225)
+.+++=.++...
T Consensus 273 G~I~vWd~~~~~ 284 (362)
T KOG0294|consen 273 GFIKVWDIDMET 284 (362)
T ss_pred ceEEEEEccccc
Confidence 677777776553
No 68
>KOG2111|consensus
Probab=87.90 E-value=60 Score=37.75 Aligned_cols=120 Identities=20% Similarity=0.318 Sum_probs=73.8
Q ss_pred CCcEEEEEecCCEEEEE---ECCeEE-EEEeecc-ceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCC
Q psy7977 306 GKSISVVSCNKNQVLCA---TGCDVY-YLEVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380 (1225)
Q Consensus 306 g~~Iv~As~n~~~VlVa---sgg~Lv-~feid~~-~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~ 380 (1225)
...|.+.+.|-+=-+|| +.|+|+ +|....+ .|.|..+-.-..+|-||++++ .+.|+||... -|
T Consensus 181 ~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp-----------~~s~LavsSd-Kg 248 (346)
T KOG2111|consen 181 DSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSP-----------NSSWLAVSSD-KG 248 (346)
T ss_pred cCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCC-----------CccEEEEEcC-CC
Confidence 34688888875555554 456655 5666555 466655544457888999976 3679999987 99
Q ss_pred eEEEEeCCC--cceE--EeecCCCCCC---------------c-ccEEEEeeCCe-eEEEEEECCCcEEEEEEcCCCC
Q psy7977 381 SARLLSLPS--LEEV--CKEPLGGEII---------------P-RSILMTCFEGH-CYLLVALGDGSMFYFSLDPASG 437 (1225)
Q Consensus 381 tv~IlsL~~--Le~v--~~~~L~~~~~---------------P-~SIll~~l~~~-~~LlVGl~nG~L~~y~ld~~sg 437 (1225)
||+||+|.+ +..- ++.++..-.+ | .+-+++.++.. ..+++--.||.+.+|.+++.++
T Consensus 249 TlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dgsy~k~~f~~~~~ 326 (346)
T KOG2111|consen 249 TLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQGTQCIIAFGSETNTVIAICADGSYYKFKFDPKNG 326 (346)
T ss_pred eEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccCCCcEEEEecCCCCeEEEEEeCCcEEEEEeccccc
Confidence 999999964 1111 1111110011 2 12444555533 5555555679999999988643
No 69
>KOG2106|consensus
Probab=87.67 E-value=11 Score=45.81 Aligned_cols=167 Identities=14% Similarity=0.240 Sum_probs=94.3
Q ss_pred EEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEE-EecCceeeec--cc-
Q psy7977 1017 ILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEK-EIKGACYSMC--EF- 1092 (1225)
Q Consensus 1017 ~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~-ev~G~v~al~--~f- 1092 (1225)
-.+++.+..|+.+.||... . ..+-|+|+...+-.-.|..-.+.+|+-. +|..+|-- ..+-+|+|++ ..
T Consensus 95 ~~Qr~y~GH~ddikc~~vH----P--dri~vatGQ~ag~~g~~~~phvriWdsv--~L~TL~V~g~f~~GV~~vaFsk~~ 166 (626)
T KOG2106|consen 95 RSQRHYLGHNDDIKCMAVH----P--DRIRVATGQGAGTSGRPLQPHVRIWDSV--TLSTLHVIGFFDRGVTCVAFSKIN 166 (626)
T ss_pred hhcccccCCCCceEEEeec----C--CceeeccCcccccCCCcCCCeeeecccc--cceeeeeeccccccceeeeecccC
Confidence 4678889999999998752 1 2344555543332124455566667644 34444432 3445566554 33
Q ss_pred cCeEEEEeC----CEEEEEEcCCCceee-eeecccceeEEEEEEEECCEEE-EeeccccEEEEEEecCCCeEEEEe---c
Q psy7977 1093 NGKLLASIN----STVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFIL-VGDLMRSLTLLQYKTMEGSFEEIS---R 1163 (1225)
Q Consensus 1093 ~G~LLa~vg----~~l~vy~l~~~~~L~-~e~~~~~~~i~~~l~~~g~~Il-vGD~~kSv~~l~y~~~~~~L~~~a---r 1163 (1225)
.|-+|+++- .-+-||+|.++..+. +.++.-.-+.+...-+..|.|+ .|- | +|.-|..+.+.|..-- .
T Consensus 167 ~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk---~-H~~Fw~~~~~~l~k~~~~fe 242 (626)
T KOG2106|consen 167 GGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGK---G-HLYFWTLRGGSLVKRQGIFE 242 (626)
T ss_pred CCceEEEecCCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCC---c-eEEEEEccCCceEEEeeccc
Confidence 467888764 357899999877553 2222111110111111112222 111 1 2333455555444322 2
Q ss_pred cCCCceeEEEEeeeCCcEEEEcCCCcEEEEEe
Q psy7977 1164 DYNPNWMTSIEILDDELFLGAENSYNLFICQK 1195 (1225)
Q Consensus 1164 D~~~~wvta~~~Ld~dt~l~aD~~gNl~vl~~ 1195 (1225)
-+....|+|+.|+.++-++.+|..|||.|...
T Consensus 243 k~ekk~Vl~v~F~engdviTgDS~G~i~Iw~~ 274 (626)
T KOG2106|consen 243 KREKKFVLCVTFLENGDVITGDSGGNILIWSK 274 (626)
T ss_pred cccceEEEEEEEcCCCCEEeecCCceEEEEeC
Confidence 22338999999999999999999999999877
No 70
>PTZ00420 coronin; Provisional
Probab=87.36 E-value=95 Score=39.48 Aligned_cols=74 Identities=12% Similarity=0.141 Sum_probs=48.4
Q ss_pred CcEEEEEec--CCEEEEE--ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeE
Q psy7977 307 KSISVVSCN--KNQVLCA--TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISA 382 (1225)
Q Consensus 307 ~~Iv~As~n--~~~VlVa--sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv 382 (1225)
..|...+.+ +.+++++ .++.|.++++..+... ........|.|++..+. ..+++.++. |++|
T Consensus 126 ~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~--~~i~~~~~V~Slswspd-----------G~lLat~s~-D~~I 191 (568)
T PTZ00420 126 KKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRA--FQINMPKKLSSLKWNIK-----------GNLLSGTCV-GKHM 191 (568)
T ss_pred CcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEE--EEEecCCcEEEEEECCC-----------CCEEEEEec-CCEE
Confidence 356666665 3455543 4788988888755321 12223567889988652 456777776 9999
Q ss_pred EEEeCCCcceEE
Q psy7977 383 RLLSLPSLEEVC 394 (1225)
Q Consensus 383 ~IlsL~~Le~v~ 394 (1225)
+||++.+.+.+.
T Consensus 192 rIwD~Rsg~~i~ 203 (568)
T PTZ00420 192 HIIDPRKQEIAS 203 (568)
T ss_pred EEEECCCCcEEE
Confidence 999998765554
No 71
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=86.96 E-value=58 Score=36.60 Aligned_cols=107 Identities=19% Similarity=0.284 Sum_probs=58.1
Q ss_pred EEEecCCEEEEE-ECCeEEEEEee-ccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCC
Q psy7977 311 VVSCNKNQVLCA-TGCDVYYLEVH-GSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP 388 (1225)
Q Consensus 311 ~As~n~~~VlVa-sgg~Lv~feid-~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~ 388 (1225)
+++..++.++|+ ++| |++++++ .....++.+. ..|+-|.+.+ .-+.+ +.+. |+.+.+++|+
T Consensus 2 c~~~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~---~~I~ql~vl~-----------~~~~l-lvLs-d~~l~~~~L~ 64 (275)
T PF00780_consen 2 CADSWGDRLLVGTEDG-LYVYDLSDPSKPTRILKL---SSITQLSVLP-----------ELNLL-LVLS-DGQLYVYDLD 64 (275)
T ss_pred CcccCCCEEEEEECCC-EEEEEecCCccceeEeec---ceEEEEEEec-----------ccCEE-EEEc-CCccEEEEch
Confidence 455667888888 445 8888873 2233332221 1155555433 12333 3344 8999999998
Q ss_pred CcceEEeec-C--CC-----CCCcc--cE-EEE---eeCCeeEEEEEECCCcEEEEEEcCC
Q psy7977 389 SLEEVCKEP-L--GG-----EIIPR--SI-LMT---CFEGHCYLLVALGDGSMFYFSLDPA 435 (1225)
Q Consensus 389 ~Le~v~~~~-L--~~-----~~~P~--SI-ll~---~l~~~~~LlVGl~nG~L~~y~ld~~ 435 (1225)
.+....... . +. ..++. .+ .++ ...+..+|.+..+. .+..|++...
T Consensus 65 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk-~i~i~~~~~~ 124 (275)
T PF00780_consen 65 SLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKK-KILIYEWNDP 124 (275)
T ss_pred hhccccccccccccccccccccccccCCeeEEeeccccccceEEEEEECC-EEEEEEEECC
Confidence 876544211 0 00 01111 11 122 12356788899888 7777887653
No 72
>KOG0316|consensus
Probab=86.51 E-value=53 Score=36.78 Aligned_cols=153 Identities=10% Similarity=0.172 Sum_probs=91.6
Q ss_pred eeeeccCCcccccCeEEEEeeCCCeEEEEccCcEEEEecCCc--ceeeeecCCCCCcEEEEEecCCEEEEE-ECCeEEEE
Q psy7977 254 VEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESK--ARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYL 330 (1225)
Q Consensus 254 veEv~~sgF~~~~~TL~ag~l~~~~iVQVT~~~IRli~~~~~--~~i~eW~~p~g~~Iv~As~n~~~VlVa-sgg~Lv~f 330 (1225)
..+++.-.|+.+..-++.|.+ ...+|+.|..+. ..++..+. ....|.+..+++.-|+-. .+|.+-.|
T Consensus 101 ~aqVNtV~fNeesSVv~Sgsf---------D~s~r~wDCRS~s~ePiQilde-a~D~V~Si~v~~heIvaGS~DGtvRty 170 (307)
T KOG0316|consen 101 LAQVNTVRFNEESSVVASGSF---------DSSVRLWDCRSRSFEPIQILDE-AKDGVSSIDVAEHEIVAGSVDGTVRTY 170 (307)
T ss_pred cceeeEEEecCcceEEEeccc---------cceeEEEEcccCCCCccchhhh-hcCceeEEEecccEEEeeccCCcEEEE
Confidence 334444456555555555555 345677765431 22222221 223577777787776664 68888888
Q ss_pred EeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceE--EeecCCCCCCcccEE
Q psy7977 331 EVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEV--CKEPLGGEIIPRSIL 408 (1225)
Q Consensus 331 eid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v--~~~~L~~~~~P~SIl 408 (1225)
.|..+.+ ...-+.+.|+|+++++ .+++.++|+- |++++++.-.+-+.+ +.-.... ..--..+
T Consensus 171 diR~G~l---~sDy~g~pit~vs~s~-----------d~nc~La~~l-~stlrLlDk~tGklL~sYkGhkn~-eykldc~ 234 (307)
T KOG0316|consen 171 DIRKGTL---SSDYFGHPITSVSFSK-----------DGNCSLASSL-DSTLRLLDKETGKLLKSYKGHKNM-EYKLDCC 234 (307)
T ss_pred Eeeccee---ehhhcCCcceeEEecC-----------CCCEEEEeec-cceeeecccchhHHHHHhcccccc-eeeeeee
Confidence 8765433 2345788999999875 3678888887 999999877653322 1110000 0001122
Q ss_pred EEeeCCeeEEEEEECCCcEEEEEEcC
Q psy7977 409 MTCFEGHCYLLVALGDGSMFYFSLDP 434 (1225)
Q Consensus 409 l~~l~~~~~LlVGl~nG~L~~y~ld~ 434 (1225)
+.+ ...+++-|..||.++.|.+..
T Consensus 235 l~q--sdthV~sgSEDG~Vy~wdLvd 258 (307)
T KOG0316|consen 235 LNQ--SDTHVFSGSEDGKVYFWDLVD 258 (307)
T ss_pred ecc--cceeEEeccCCceEEEEEecc
Confidence 222 357889999999999998753
No 73
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=86.40 E-value=62 Score=36.37 Aligned_cols=159 Identities=11% Similarity=0.141 Sum_probs=85.6
Q ss_pred eeeccccceeeEEeeccccCCccEEEEEecCCCccEEEEeecce---e-eEEEEeeCCCc-ceE-eEeeeCCCCCCccEE
Q psy7977 163 SFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIG---I-EEHACIDLPGI-KGI-WALSIGSPKNLDNTL 236 (1225)
Q Consensus 163 ~l~NlgPI~D~~v~d~~~~~~~qLva~sG~g~~GsLrilR~GI~---~-~~~~s~eLpgv-~~i-Wtl~~~~~~~~d~yL 236 (1225)
.++....+.-|+. .....+...|+++..+ .|.+++..-+ . .....+.+|.. ..+ |. .+.+
T Consensus 86 ~~~~~~~v~~f~~-~~~~~~~~~L~va~kk----~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~---------~~~i 151 (275)
T PF00780_consen 86 KLPETKGVSFFAV-NGGHEGSRRLCVAVKK----KILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL---------GNKI 151 (275)
T ss_pred cccccCCeeEEee-ccccccceEEEEEECC----EEEEEEEECCcccccceeEEEEcCCCcEEEEEe---------CCEE
Confidence 4555566666661 1122344556665555 7777776553 2 46667778754 333 32 4677
Q ss_pred EEEcCCceEEEEEcCceeeeec---cCC--c---ccccCeEEEEeeCCCeEEEEccCcEEEEecCC---cceeeeecCCC
Q psy7977 237 VLSFVGHTRVLTLSGAEVEETE---MGG--F---TSDQQTFYCGNVDPRTVLQVTPSAAILISTES---KARVSSWEPPN 305 (1225)
Q Consensus 237 VlSf~~~T~Vl~i~ge~veEv~---~sg--F---~~~~~TL~ag~l~~~~iVQVT~~~IRli~~~~---~~~i~eW~~p~ 305 (1225)
++++.++=.++.++..+.+++- .+. | ..+...+.+-.+.++-++=+..+--..++..+ ....-.|..
T Consensus 152 ~v~~~~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~~~~~g~fv~~~G~~~r~~~i~W~~-- 229 (275)
T PF00780_consen 152 CVGTSKGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLCYDNIGVFVNKNGEPSRKSTIQWSS-- 229 (275)
T ss_pred EEEeCCceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeCCceEEEEecceEEEEcCCCCcCcccEEEcCC--
Confidence 7777666556665433444442 111 0 11223344555554444434444333344332 124566753
Q ss_pred CCcEEEEEecCCEEEEEECCeEEEEEeeccceeE
Q psy7977 306 GKSISVVSCNKNQVLCATGCDVYYLEVHGSEIKQ 339 (1225)
Q Consensus 306 g~~Iv~As~n~~~VlVasgg~Lv~feid~~~L~e 339 (1225)
...+++...||++....+.|-...+.++++.+
T Consensus 230 --~p~~~~~~~pyli~~~~~~iEV~~~~~~~lvQ 261 (275)
T PF00780_consen 230 --APQSVAYSSPYLIAFSSNSIEVRSLETGELVQ 261 (275)
T ss_pred --chhEEEEECCEEEEECCCEEEEEECcCCcEEE
Confidence 35678889999999855557667776665544
No 74
>KOG0282|consensus
Probab=86.40 E-value=3.7 Score=49.36 Aligned_cols=187 Identities=14% Similarity=0.191 Sum_probs=113.7
Q ss_pred eeEEEEEEECCCCcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEe
Q psy7977 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082 (1225)
Q Consensus 1003 ~~s~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev 1082 (1225)
.-..++|-|-.|.+++.++.+ ++.+.|+ +|.-++...|+||+. .|+|+-|++-.++ ++++..-
T Consensus 278 fD~~lKlwDtETG~~~~~f~~--~~~~~cv---kf~pd~~n~fl~G~s----------d~ki~~wDiRs~k--vvqeYd~ 340 (503)
T KOG0282|consen 278 FDRFLKLWDTETGQVLSRFHL--DKVPTCV---KFHPDNQNIFLVGGS----------DKKIRQWDIRSGK--VVQEYDR 340 (503)
T ss_pred cceeeeeeccccceEEEEEec--CCCceee---ecCCCCCcEEEEecC----------CCcEEEEeccchH--HHHHHHh
Confidence 445899999999999998876 4666654 676556667788863 6799999997655 3333222
Q ss_pred -cCceeeeccc-cC-eEEEE-eCCEEEEEEcCCCceee--eeec--ccceeEEEEE---------EEECCEEEEeecccc
Q psy7977 1083 -KGACYSMCEF-NG-KLLAS-INSTVRLFEWTNEKELR--LECS--HFNNIIALFL---------KVKGDFILVGDLMRS 1145 (1225)
Q Consensus 1083 -~G~v~al~~f-~G-~LLa~-vg~~l~vy~l~~~~~L~--~e~~--~~~~~i~~~l---------~~~g~~IlvGD~~kS 1145 (1225)
=|++..+.=+ .| |++.+ =-+++|||+++..-.++ .+.. ..|. +.+ ++.+|+|++=-
T Consensus 341 hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~---~~~~P~~~~~~aQs~dN~i~ifs---- 413 (503)
T KOG0282|consen 341 HLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPC---LTLHPNGKWFAAQSMDNYIAIFS---- 413 (503)
T ss_pred hhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcc---eecCCCCCeehhhccCceEEEEe----
Confidence 2666666644 33 55555 44799999998654332 1111 1111 112 24566665521
Q ss_pred EEEEEEecCCCeEEEEeccCCCceeEEEEeeeC-CcEEEEcCCCcEEEEEeCCCCCCc-c-ccceeEEEEEEEE
Q psy7977 1146 LTLLQYKTMEGSFEEISRDYNPNWMTSIEILDD-ELFLGAENSYNLFICQKDSAATSD-E-DRTHLQEVGTVHL 1216 (1225)
Q Consensus 1146 v~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~-dt~l~aD~~gNl~vl~~~~~~~~~-~-~~~rL~~~~~fhl 1216 (1225)
...+|+. |+=..|.....+-+-+.++|=.+ ++++.+|.+|++++..+.+..--. . -....-....||=
T Consensus 414 -~~~~~r~--nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP 484 (503)
T KOG0282|consen 414 -TVPPFRL--NKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHP 484 (503)
T ss_pred -ccccccc--CHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecC
Confidence 1223332 33344556666777777777644 489999999999999988753311 1 1124445556664
No 75
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=85.94 E-value=15 Score=36.38 Aligned_cols=79 Identities=20% Similarity=0.361 Sum_probs=57.3
Q ss_pred eEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEecCceeeeccc-cCeEEEE-eCCEEEE
Q psy7977 1029 ALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEF-NGKLLAS-INSTVRL 1106 (1225)
Q Consensus 1029 ~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev~G~v~al~~f-~G~LLa~-vg~~l~v 1106 (1225)
+.|||.+.|..+++.-|+|||. -..|++|+=. +++++-...+.|++|+.+ .+++..| .|.+|-+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~----------D~~IRvf~~~----e~~~Ei~e~~~v~~L~~~~~~~F~Y~l~NGTVGv 67 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSD----------DFEIRVFKGD----EIVAEITETDKVTSLCSLGGGRFAYALANGTVGV 67 (111)
T ss_pred eeEEEEEecCCCCcceEEEecC----------CcEEEEEeCC----cEEEEEecccceEEEEEcCCCEEEEEecCCEEEE
Confidence 6789999999888899999984 1357777633 578877788999999999 4677776 5678999
Q ss_pred EEcCCCceeeeeeccc
Q psy7977 1107 FEWTNEKELRLECSHF 1122 (1225)
Q Consensus 1107 y~l~~~~~L~~e~~~~ 1122 (1225)
|+-. ..+.|...++.
T Consensus 68 Y~~~-~RlWRiKSK~~ 82 (111)
T PF14783_consen 68 YDRS-QRLWRIKSKNQ 82 (111)
T ss_pred EeCc-ceeeeeccCCC
Confidence 9764 22344434443
No 76
>KOG1539|consensus
Probab=85.44 E-value=65 Score=41.66 Aligned_cols=183 Identities=12% Similarity=0.112 Sum_probs=103.7
Q ss_pred CccEEEEEcCCceEEEEEcCceeeeeccCCcccccCeEEEEeeCCCeEEEEccCcEEEEecCCcce---e--eeecCCCC
Q psy7977 232 LDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKAR---V--SSWEPPNG 306 (1225)
Q Consensus 232 ~d~yLVlSf~~~T~Vl~i~ge~veEv~~sgF~~~~~TL~ag~l~~~~iVQVT~~~IRli~~~~~~~---i--~eW~~p~g 306 (1225)
+.+|..+.+.+.-.+|+. |+.+..+... .+.++..=...+..++-++..++..+-.....+ . ....+..+
T Consensus 85 ~~~~vy~A~g~~i~~~~r-gk~i~~~~~~----~~a~v~~l~~fGe~lia~d~~~~l~vw~~s~~~~e~~l~~~~~~~~~ 159 (910)
T KOG1539|consen 85 DKDYVYVASGNKIYAYAR-GKHIRHTTLL----HGAKVHLLLPFGEHLIAVDISNILFVWKTSSIQEELYLQSTFLKVEG 159 (910)
T ss_pred cCceEEEecCcEEEEEEc-cceEEEEecc----ccceEEEEeeecceEEEEEccCcEEEEEeccccccccccceeeeccC
Confidence 346777777776667765 5555544211 112333333334455555555444332111000 0 11112222
Q ss_pred C---cEEEEEecCCEEEEE-ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeE
Q psy7977 307 K---SISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISA 382 (1225)
Q Consensus 307 ~---~Iv~As~n~~~VlVa-sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv 382 (1225)
. +|.|-+..=+-|++. +.|.+.++.+..+++.- .-......|+|+.-+|. -+++|||+- +|+|
T Consensus 160 ~~Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~-~f~~~~s~IT~ieqsPa-----------LDVVaiG~~-~G~V 226 (910)
T KOG1539|consen 160 DFITALLHPSTYLNKIVVGSSQGRLQLWNVRTGKVVY-TFQEFFSRITAIEQSPA-----------LDVVAIGLE-NGTV 226 (910)
T ss_pred CceeeEecchhheeeEEEeecCCcEEEEEeccCcEEE-EecccccceeEeccCCc-----------ceEEEEecc-CceE
Confidence 2 234444445667775 88999999988664332 12334577888865442 478999998 9999
Q ss_pred EEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcC
Q psy7977 383 RLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDP 434 (1225)
Q Consensus 383 ~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~ 434 (1225)
.|+++..-+.+.+-..+ .....++.+- -.|.|.|..|-.+|.+..|.++.
T Consensus 227 iifNlK~dkil~sFk~d-~g~VtslSFr-tDG~p~las~~~~G~m~~wDLe~ 276 (910)
T KOG1539|consen 227 IIFNLKFDKILMSFKQD-WGRVTSLSFR-TDGNPLLASGRSNGDMAFWDLEK 276 (910)
T ss_pred EEEEcccCcEEEEEEcc-ccceeEEEec-cCCCeeEEeccCCceEEEEEcCC
Confidence 99999755555432221 0122233322 13688999999999999999874
No 77
>KOG0279|consensus
Probab=85.26 E-value=17 Score=41.34 Aligned_cols=132 Identities=11% Similarity=0.085 Sum_probs=77.3
Q ss_pred cEEEEecCCcceeeeecCCCCCcEEEEEec-CCEEEEE--ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCC
Q psy7977 286 AAILISTESKARVSSWEPPNGKSISVVSCN-KNQVLCA--TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEET 362 (1225)
Q Consensus 286 ~IRli~~~~~~~i~eW~~p~g~~Iv~As~n-~~~VlVa--sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~ 362 (1225)
-|++.+.+..+..+.... ....++.+++. |.-++.+ .+|++++.++++++- +...+-...|.+++++|
T Consensus 173 tvKvWnl~~~~l~~~~~g-h~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~--lysl~a~~~v~sl~fsp------ 243 (315)
T KOG0279|consen 173 TVKVWNLRNCQLRTTFIG-HSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKN--LYSLEAFDIVNSLCFSP------ 243 (315)
T ss_pred eEEEEccCCcchhhcccc-ccccEEEEEECCCCCEEecCCCCceEEEEEccCCce--eEeccCCCeEeeEEecC------
Confidence 355555543222233221 11234444444 4455554 468888888775521 22223335677888765
Q ss_pred CCccccCcEEEEEEecCCeEEEEeCCCcceEEe---ecCCC---CCCcccEEEEeeCCeeEEEEEECCCcEEEEEEc
Q psy7977 363 SSEPAKAQLAAVGLWTDISARLLSLPSLEEVCK---EPLGG---EIIPRSILMTCFEGHCYLLVALGDGSMFYFSLD 433 (1225)
Q Consensus 363 ~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~---~~L~~---~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld 433 (1225)
+..+++.+. +.+|+|+++.+-..+.. +.... ...|+++.++-..+..+||.|..+|.+-.+++.
T Consensus 244 -----nrywL~~at--~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 244 -----NRYWLCAAT--ATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred -----CceeEeecc--CCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 356777776 56799999975322221 11110 235777888877677899999999999888763
No 78
>KOG0305|consensus
Probab=85.03 E-value=94 Score=38.59 Aligned_cols=206 Identities=16% Similarity=0.203 Sum_probs=112.8
Q ss_pred CCEEEEEECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEe
Q psy7977 316 KNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCK 395 (1225)
Q Consensus 316 ~~~VlVasgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~ 395 (1225)
.+.|+|+.+..+++-.-..+.+.++.... .+.|+++.-.+ ...+|+||+. +|+|+||+......+..
T Consensus 188 ~n~laValg~~vylW~~~s~~v~~l~~~~-~~~vtSv~ws~-----------~G~~LavG~~-~g~v~iwD~~~~k~~~~ 254 (484)
T KOG0305|consen 188 ANVLAVALGQSVYLWSASSGSVTELCSFG-EELVTSVKWSP-----------DGSHLAVGTS-DGTVQIWDVKEQKKTRT 254 (484)
T ss_pred CCeEEEEecceEEEEecCCCceEEeEecC-CCceEEEEECC-----------CCCEEEEeec-CCeEEEEehhhcccccc
Confidence 34555666666666555545544444433 78899988764 3679999998 99999999865433322
Q ss_pred ecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCC--c-cccceeeeecCccceEEEEeeCCceEEEEec--C
Q psy7977 396 EPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG--R-LTDKKKVTLGTQPTVLKTFRSLSTTNVFACS--D 470 (1225)
Q Consensus 396 ~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg--~-Ls~~k~~~LG~~pV~L~~~~~~g~~~Vfa~s--d 470 (1225)
... ...++ +..... ....|..|.++|.++.+.+-.... + +...+...-| ++......-||.| |
T Consensus 255 ~~~--~h~~r-vg~laW-~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCg--------Lkws~d~~~lASGgnD 322 (484)
T KOG0305|consen 255 LRG--SHASR-VGSLAW-NSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCG--------LKWSPDGNQLASGGND 322 (484)
T ss_pred ccC--CcCce-eEEEec-cCceEEEecCCCcEEEEEEecchhhhhhhhcccceeee--------eEECCCCCeeccCCCc
Confidence 111 11222 211222 245688999999999987753211 1 1111111111 1111111223332 1
Q ss_pred CcEEEEEc---CCeeEEeecccc-cccccccCCCCCCCCeEEEEeC----CeEEEEEEcCCCCeeeEEEeCCCcccEEEE
Q psy7977 471 RPTVIYSS---NHKLVFSNVNLR-QVNHMCSLNAESYPDSLALATD----STFTFGTIDEIQKLHIRTVPLGEAPRRIAY 542 (1225)
Q Consensus 471 rP~liyss---~g~l~~~pl~~~-~v~~~s~F~se~~p~glv~vs~----~~LrI~~i~~~~~l~ir~IpLg~TprrIay 542 (1225)
.-..|+.. .-++++...... .+...||+.. +++++-+ ..++|-..- ..-.++.+.-+.++..++|
T Consensus 323 N~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~-----~lLAsGGGs~D~~i~fwn~~--~g~~i~~vdtgsQVcsL~W 395 (484)
T KOG0305|consen 323 NVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQS-----GLLATGGGSADRCIKFWNTN--TGARIDSVDTGSQVCSLIW 395 (484)
T ss_pred cceEeccCCCccccEEEeccceeeeEeeeCCCcc-----CceEEcCCCcccEEEEEEcC--CCcEecccccCCceeeEEE
Confidence 22222221 334455544332 2335677754 4555433 244444332 4567888888999999999
Q ss_pred ecCCCEEEEEE
Q psy7977 543 QESSQTFGVIT 553 (1225)
Q Consensus 543 ~p~s~~~vV~t 553 (1225)
++..+-++..-
T Consensus 396 sk~~kEi~sth 406 (484)
T KOG0305|consen 396 SKKYKELLSTH 406 (484)
T ss_pred cCCCCEEEEec
Confidence 99998766553
No 79
>KOG0318|consensus
Probab=84.95 E-value=1.1e+02 Score=37.87 Aligned_cols=142 Identities=13% Similarity=0.210 Sum_probs=96.8
Q ss_pred CCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCc-EEEEEEEEecCceeeeccc-cCeEEEE--eCCEEEEEEcCCCceee
Q psy7977 1041 PNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGK-LQQIAEKEIKGACYSMCEF-NGKLLAS--INSTVRLFEWTNEKELR 1116 (1225)
Q Consensus 1041 ~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~k-L~lv~~~ev~G~v~al~~f-~G~LLa~--vg~~l~vy~l~~~~~L~ 1116 (1225)
.+.+++|| ++ -|.+++|.+..+. .+..-.++-+|++++++-= .|..||+ +..++.+|+...++. .
T Consensus 454 ~~~~vaVG-----G~-----Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~-~ 522 (603)
T KOG0318|consen 454 DGSEVAVG-----GQ-----DGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV-K 522 (603)
T ss_pred CCCEEEEe-----cc-----cceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce-e
Confidence 45789999 44 4679999998754 3444557789999998733 6766665 789999999987654 2
Q ss_pred eeecccceeEEEEEE-EEC-CEEEEeeccccEEEEEEecCCCeEEEEeccCCCceeEEEEeeeCCcEEEEcCCCcEEEEE
Q psy7977 1117 LECSHFNNIIALFLK-VKG-DFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ 1194 (1225)
Q Consensus 1117 ~e~~~~~~~i~~~l~-~~g-~~IlvGD~~kSv~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~dt~l~aD~~gNl~vl~ 1194 (1225)
...-.|.+-=+..+. +-. .++.-|-+=.+|.+...+. |.+- ..+++.++.-|+.+.+||+.|++.+-.+.|+-+-.
T Consensus 523 ~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~k-P~~~-i~iknAH~~gVn~v~wlde~tvvSsG~Da~iK~W~ 600 (603)
T KOG0318|consen 523 TNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKK-PAKH-IIIKNAHLGGVNSVAWLDESTVVSSGQDANIKVWN 600 (603)
T ss_pred cceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccC-hhhh-eEeccccccCceeEEEecCceEEeccCcceeEEec
Confidence 101111110012232 122 3566666666777766654 3333 78899999999999999999999999999987654
Q ss_pred e
Q psy7977 1195 K 1195 (1225)
Q Consensus 1195 ~ 1195 (1225)
.
T Consensus 601 v 601 (603)
T KOG0318|consen 601 V 601 (603)
T ss_pred c
Confidence 4
No 80
>PTZ00421 coronin; Provisional
Probab=84.73 E-value=1.2e+02 Score=38.04 Aligned_cols=113 Identities=12% Similarity=0.088 Sum_probs=62.3
Q ss_pred CcEEEEEecC--CEEEE-E-ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeE
Q psy7977 307 KSISVVSCNK--NQVLC-A-TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISA 382 (1225)
Q Consensus 307 ~~Iv~As~n~--~~VlV-a-sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv 382 (1225)
..|...+.+. ..+++ + .++.|.+.++..+..... -......|.|++..+. ...++.|.+ |++|
T Consensus 126 ~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~-l~~h~~~V~sla~spd-----------G~lLatgs~-Dg~I 192 (493)
T PTZ00421 126 KKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEV-IKCHSDQITSLEWNLD-----------GSLLCTTSK-DKKL 192 (493)
T ss_pred CcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEE-EcCCCCceEEEEEECC-----------CCEEEEecC-CCEE
Confidence 4566666652 33444 4 578898888875532211 1123456888888652 457888887 9999
Q ss_pred EEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEE---CCCcEEEEEEc
Q psy7977 383 RLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVAL---GDGSMFYFSLD 433 (1225)
Q Consensus 383 ~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl---~nG~L~~y~ld 433 (1225)
+||++.+.+.+....-........+... -.+...+.+|. .||.+..|.+.
T Consensus 193 rIwD~rsg~~v~tl~~H~~~~~~~~~w~-~~~~~ivt~G~s~s~Dr~VklWDlr 245 (493)
T PTZ00421 193 NIIDPRDGTIVSSVEAHASAKSQRCLWA-KRKDLIITLGCSKSQQRQIMLWDTR 245 (493)
T ss_pred EEEECCCCcEEEEEecCCCCcceEEEEc-CCCCeEEEEecCCCCCCeEEEEeCC
Confidence 9999987555443211101111111111 11223334453 46788777654
No 81
>KOG0278|consensus
Probab=83.80 E-value=27 Score=39.20 Aligned_cols=142 Identities=13% Similarity=0.145 Sum_probs=92.3
Q ss_pred CCCeEEE-EccCcEEEEecCCcceeeeecCCCCCcEEEEEec--CCEEEEEECCeEEEEEeeccceeEEeeeccCceeEE
Q psy7977 275 DPRTVLQ-VTPSAAILISTESKARVSSWEPPNGKSISVVSCN--KNQVLCATGCDVYYLEVHGSEIKQLAHRALEYEVAC 351 (1225)
Q Consensus 275 ~~~~iVQ-VT~~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n--~~~VlVasgg~Lv~feid~~~L~ev~~~~l~~eISc 351 (1225)
.+..|+- -..+.||+.|..++.+++....+. .++++.+. +.+|.++.++++.+.+.. .+..+.+.+++..|.+
T Consensus 154 eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s--~VtSlEvs~dG~ilTia~gssV~Fwdak--sf~~lKs~k~P~nV~S 229 (334)
T KOG0278|consen 154 EDKCILSSADDKTVRLWDHRTGTEVQSLEFNS--PVTSLEVSQDGRILTIAYGSSVKFWDAK--SFGLLKSYKMPCNVES 229 (334)
T ss_pred cCceEEeeccCCceEEEEeccCcEEEEEecCC--CCcceeeccCCCEEEEecCceeEEeccc--cccceeeccCcccccc
Confidence 3556666 446789999988877877776553 45666654 567777788888887655 5666777888888887
Q ss_pred EEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEee-CCeeEEEEEECCCcEEEE
Q psy7977 352 LDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF-EGHCYLLVALGDGSMFYF 430 (1225)
Q Consensus 352 Lai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l-~~~~~LlVGl~nG~L~~y 430 (1225)
-++.|- ..+++.|-. |+.++-|...+-+.+-.. .. .-+.-+.-+.+ ++...--.|..||.+..+
T Consensus 230 ASL~P~-----------k~~fVaGge-d~~~~kfDy~TgeEi~~~-nk--gh~gpVhcVrFSPdGE~yAsGSEDGTirlW 294 (334)
T KOG0278|consen 230 ASLHPK-----------KEFFVAGGE-DFKVYKFDYNTGEEIGSY-NK--GHFGPVHCVRFSPDGELYASGSEDGTIRLW 294 (334)
T ss_pred ccccCC-----------CceEEecCc-ceEEEEEeccCCceeeec-cc--CCCCceEEEEECCCCceeeccCCCceEEEE
Confidence 777652 255666665 888999988754433221 00 11111323333 233344689999999999
Q ss_pred EEcCC
Q psy7977 431 SLDPA 435 (1225)
Q Consensus 431 ~ld~~ 435 (1225)
+..+.
T Consensus 295 Qt~~~ 299 (334)
T KOG0278|consen 295 QTTPG 299 (334)
T ss_pred EecCC
Confidence 88764
No 82
>KOG1274|consensus
Probab=83.50 E-value=1.1e+02 Score=40.17 Aligned_cols=216 Identities=13% Similarity=0.148 Sum_probs=111.4
Q ss_pred EEEEEecCCCccEEEEeecceeeEEEEeeCCCcceEeEeeeCCCCCCccEEEEEcCCceE-EEEEcCceeeee-------
Q psy7977 186 LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTR-VLTLSGAEVEET------- 257 (1225)
Q Consensus 186 Lva~sG~g~~GsLrilR~GI~~~~~~s~eLpgv~~iWtl~~~~~~~~d~yLVlSf~~~T~-Vl~i~ge~veEv------- 257 (1225)
.++.| |.+|.+|++.-+..-++=-+++.-|..-.|- . .+..+++.+..+.|. ++.+ ++..++.
T Consensus 27 fi~tc--gsdg~ir~~~~~sd~e~P~ti~~~g~~v~~i-a-----~~s~~f~~~s~~~tv~~y~f-ps~~~~~iL~Rftl 97 (933)
T KOG1274|consen 27 FICTC--GSDGDIRKWKTNSDEEEPETIDISGELVSSI-A-----CYSNHFLTGSEQNTVLRYKF-PSGEEDTILARFTL 97 (933)
T ss_pred EEEEe--cCCCceEEeecCCcccCCchhhccCceeEEE-e-----ecccceEEeeccceEEEeeC-CCCCccceeeeeec
Confidence 45555 4678888888766543322333233333332 2 123466666666664 5665 3222221
Q ss_pred --ccCCcccccCeEEEEeeCCCeEEEEccCcEEEEecCCcceeeeecCCCCCcEEEEEec--CCEEEEE-ECCeEEEEEe
Q psy7977 258 --EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCN--KNQVLCA-TGCDVYYLEV 332 (1225)
Q Consensus 258 --~~sgF~~~~~TL~ag~l~~~~iVQVT~~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n--~~~VlVa-sgg~Lv~fei 332 (1225)
....|..++.-+++|. -..+|.+++.+........+ +...++.+-+.+ +..++++ .+|.+.++++
T Consensus 98 p~r~~~v~g~g~~iaags---------dD~~vK~~~~~D~s~~~~lr-gh~apVl~l~~~p~~~fLAvss~dG~v~iw~~ 167 (933)
T KOG1274|consen 98 PIRDLAVSGSGKMIAAGS---------DDTAVKLLNLDDSSQEKVLR-GHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDL 167 (933)
T ss_pred cceEEEEecCCcEEEeec---------CceeEEEEeccccchheeec-ccCCceeeeeEcCCCCEEEEEecCceEEEEEc
Confidence 1222333333333332 13445666554322222222 222356666665 4566665 5899999998
Q ss_pred ecccee----EEee-eccC-ceeE-EEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcc
Q psy7977 333 HGSEIK----QLAH-RALE-YEVA-CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPR 405 (1225)
Q Consensus 333 d~~~L~----ev~~-~~l~-~eIS-cLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~ 405 (1225)
+++.+. -+.+ .+.. ..+. -++..| ....|++++. |++|.+|+-.+.+..+.-.. ...-.
T Consensus 168 ~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~P----------k~g~la~~~~--d~~Vkvy~r~~we~~f~Lr~--~~~ss 233 (933)
T KOG1274|consen 168 QDGILSKTLTGVDKDNEFILSRICTRLAWHP----------KGGTLAVPPV--DNTVKVYSRKGWELQFKLRD--KLSSS 233 (933)
T ss_pred ccchhhhhcccCCccccccccceeeeeeecC----------CCCeEEeecc--CCeEEEEccCCceeheeecc--ccccc
Confidence 865321 1111 1111 2221 233333 2245555554 89999999988666543222 11111
Q ss_pred cEEEEeeC-CeeEEEEEECCCcEEEEEEcC
Q psy7977 406 SILMTCFE-GHCYLLVALGDGSMFYFSLDP 434 (1225)
Q Consensus 406 SIll~~l~-~~~~LlVGl~nG~L~~y~ld~ 434 (1225)
-+..+.+. .+.||-.+.-||.++.+.++.
T Consensus 234 ~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 234 KFSDLQWSPNGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred ceEEEEEcCCCcEEeeeccCCcEEEEeccc
Confidence 14445553 468999999999999999874
No 83
>KOG0283|consensus
Probab=83.44 E-value=15 Score=46.92 Aligned_cols=131 Identities=15% Similarity=0.190 Sum_probs=85.9
Q ss_pred EEEEEEECCCCcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEE---EE---
Q psy7977 1005 HNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQ---IA--- 1078 (1225)
Q Consensus 1005 s~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~l---v~--- 1078 (1225)
+-+||=+-...++++-.+++ |.++++|.. - +.++.||||= .|+.+.|...+.||++ |+
T Consensus 432 ~KvRiWsI~d~~Vv~W~Dl~--~lITAvcy~---P-dGk~avIGt~----------~G~C~fY~t~~lk~~~~~~I~~~~ 495 (712)
T KOG0283|consen 432 GKVRLWSISDKKVVDWNDLR--DLITAVCYS---P-DGKGAVIGTF----------NGYCRFYDTEGLKLVSDFHIRLHN 495 (712)
T ss_pred cceEEeecCcCeeEeehhhh--hhheeEEec---c-CCceEEEEEe----------ccEEEEEEccCCeEEEeeeEeecc
Confidence 36899998889999888887 888888743 2 3689999983 5788888887755532 22
Q ss_pred EEEecCc-eeeeccccC---eEEEE-eCCEEEEEEcCCCceee--eeecccceeEEEEEEEECCEEEEeeccccEEEEEE
Q psy7977 1079 EKEIKGA-CYSMCEFNG---KLLAS-INSTVRLFEWTNEKELR--LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQY 1151 (1225)
Q Consensus 1079 ~~ev~G~-v~al~~f~G---~LLa~-vg~~l~vy~l~~~~~L~--~e~~~~~~~i~~~l~~~g~~IlvGD~~kSv~~l~y 1151 (1225)
++..+|- ||++..+-| ++|+. --++||||++.+++++. -........+--++...|.+|+.|-==..|.+.++
T Consensus 496 ~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~ 575 (712)
T KOG0283|consen 496 KKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKN 575 (712)
T ss_pred CccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeC
Confidence 2334444 888776644 56655 56999999998776542 11122222223455567889999873334444444
No 84
>KOG0277|consensus
Probab=83.15 E-value=87 Score=35.51 Aligned_cols=54 Identities=20% Similarity=0.121 Sum_probs=37.6
Q ss_pred CCeEEEEEee-ccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCC
Q psy7977 324 GCDVYYLEVH-GSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP 388 (1225)
Q Consensus 324 gg~Lv~feid-~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~ 388 (1225)
+|.|.++|++ +..+.|..+.+-++-.--++-++. -.+.+++++- ||+++||.++
T Consensus 37 ~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~----------~e~~~~~a~G-DGSLrl~d~~ 91 (311)
T KOG0277|consen 37 NGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSEN----------HENQVIAASG-DGSLRLFDLT 91 (311)
T ss_pred CceEEEEecCCCCCeEEEEeeecccceeEeeecCC----------CcceEEEEec-CceEEEeccC
Confidence 6899999996 457888777766554444444442 2455666665 9999999975
No 85
>KOG0646|consensus
Probab=81.77 E-value=51 Score=39.94 Aligned_cols=107 Identities=20% Similarity=0.133 Sum_probs=68.5
Q ss_pred EEEEecCCEEEEE--ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeC
Q psy7977 310 SVVSCNKNQVLCA--TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL 387 (1225)
Q Consensus 310 v~As~n~~~VlVa--sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL 387 (1225)
..++.+..|++.+ ....|.+.++...+ ..+.+.-++..+.||+..+. ..|++.|+- .+.+++|.|
T Consensus 44 sl~~l~~~yllsaq~~rp~l~vw~i~k~~-~~~q~~v~Pg~v~al~s~n~-----------G~~l~ag~i-~g~lYlWel 110 (476)
T KOG0646|consen 44 SLTALNNEYLLSAQLKRPLLHVWEILKKD-QVVQYIVLPGPVHALASSNL-----------GYFLLAGTI-SGNLYLWEL 110 (476)
T ss_pred hhhhhchhheeeecccCccccccccCchh-hhhhhcccccceeeeecCCC-----------ceEEEeecc-cCcEEEEEe
Confidence 4455677888887 34456666665321 11234456788999987653 567777766 899999999
Q ss_pred CCcceEEeecCCCCCCcccEEEEee-CCeeEEEEEECCCcEEEEEEc
Q psy7977 388 PSLEEVCKEPLGGEIIPRSILMTCF-EGHCYLLVALGDGSMFYFSLD 433 (1225)
Q Consensus 388 ~~Le~v~~~~L~~~~~P~SIll~~l-~~~~~LlVGl~nG~L~~y~ld 433 (1225)
.+-..+.. + .+--++|....+ ++..+++=|-.||.++.|.+.
T Consensus 111 ssG~LL~v--~--~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~ 153 (476)
T KOG0646|consen 111 SSGILLNV--L--SAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLT 153 (476)
T ss_pred ccccHHHH--H--HhhccceeEEEEeCCCcEEEecCCCccEEEEEEE
Confidence 86333221 0 011233433333 467899999999999999763
No 86
>KOG1273|consensus
Probab=80.64 E-value=18 Score=41.82 Aligned_cols=150 Identities=15% Similarity=0.251 Sum_probs=90.9
Q ss_pred EEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcE-EEEEEEEecCceeeeccc-cCeEEEE--eCCEEEEEE
Q psy7977 1033 ISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKL-QQIAEKEIKGACYSMCEF-NGKLLAS--INSTVRLFE 1108 (1225)
Q Consensus 1033 ~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL-~lv~~~ev~G~v~al~~f-~G~LLa~--vg~~l~vy~ 1108 (1225)
.+|+|+. -..|++||.+ .||+.+|++...++ +.+.. ---||++||-- .||+|.. -..++.+||
T Consensus 27 ~~~~Fs~-~G~~lAvGc~----------nG~vvI~D~~T~~iar~lsa--H~~pi~sl~WS~dgr~LltsS~D~si~lwD 93 (405)
T KOG1273|consen 27 ECCQFSR-WGDYLAVGCA----------NGRVVIYDFDTFRIARMLSA--HVRPITSLCWSRDGRKLLTSSRDWSIKLWD 93 (405)
T ss_pred ceEEecc-Ccceeeeecc----------CCcEEEEEccccchhhhhhc--cccceeEEEecCCCCEeeeecCCceeEEEe
Confidence 3467753 4479999964 68999999975321 11100 01366777744 6875543 568999999
Q ss_pred cCCCceee-eeecccceeEEEEEEEECCEEEEeeccccEEEEEEecCCCeEEEEeccCCCceeEEEEeeeCC--cEEEEc
Q psy7977 1109 WTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE--LFLGAE 1185 (1225)
Q Consensus 1109 l~~~~~L~-~e~~~~~~~i~~~l~~~g~~IlvGD~~kSv~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~d--t~l~aD 1185 (1225)
+-+...|. .....-.-. +.+.....|.+++.=+-+|-.+..|.....++...-+|-.-..+-...+.|.. .++.+-
T Consensus 94 l~~gs~l~rirf~spv~~-~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGt 172 (405)
T KOG1273|consen 94 LLKGSPLKRIRFDSPVWG-AQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGT 172 (405)
T ss_pred ccCCCceeEEEccCccce-eeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEec
Confidence 98766553 211111111 23333455788888888898888888644444444444444444444444543 688888
Q ss_pred CCCcEEEEEeC
Q psy7977 1186 NSYNLFICQKD 1196 (1225)
Q Consensus 1186 ~~gNl~vl~~~ 1196 (1225)
.-|-|.|+.-.
T Consensus 173 sKGkllv~~a~ 183 (405)
T KOG1273|consen 173 SKGKLLVYDAE 183 (405)
T ss_pred CcceEEEEecc
Confidence 88888887654
No 87
>KOG0266|consensus
Probab=80.08 E-value=1.6e+02 Score=36.32 Aligned_cols=115 Identities=19% Similarity=0.254 Sum_probs=73.3
Q ss_pred CcEEEEEecC-CEEEEE--ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEE
Q psy7977 307 KSISVVSCNK-NQVLCA--TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISAR 383 (1225)
Q Consensus 307 ~~Iv~As~n~-~~VlVa--sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~ 383 (1225)
..|.+++++. ...+++ .++.+.+.++..++....- ..-...|++++..+ ...+++.+.+ |+.++
T Consensus 247 ~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l-~~hs~~is~~~f~~-----------d~~~l~s~s~-d~~i~ 313 (456)
T KOG0266|consen 247 TYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKL-KGHSDGISGLAFSP-----------DGNLLVSASY-DGTIR 313 (456)
T ss_pred CceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEee-eccCCceEEEEECC-----------CCCEEEEcCC-CccEE
Confidence 3467777763 345554 5788888888765443321 12345789998865 2568888887 99999
Q ss_pred EEeCCCcceEEeecCCCCCCcccEEEEee-CCeeEEEEEECCCcEEEEEEcC
Q psy7977 384 LLSLPSLEEVCKEPLGGEIIPRSILMTCF-EGHCYLLVALGDGSMFYFSLDP 434 (1225)
Q Consensus 384 IlsL~~Le~v~~~~L~~~~~P~SIll~~l-~~~~~LlVGl~nG~L~~y~ld~ 434 (1225)
||++......+...+.....|..+..+.+ +...||+++..|+.+..+++..
T Consensus 314 vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~ 365 (456)
T KOG0266|consen 314 VWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRS 365 (456)
T ss_pred EEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccC
Confidence 99998655321111211112212333344 4678999999999999998763
No 88
>KOG2055|consensus
Probab=79.64 E-value=26 Score=42.31 Aligned_cols=137 Identities=14% Similarity=0.120 Sum_probs=94.6
Q ss_pred CeeEEEEEECCCcEEEEEEcCCCCccccceeeeecCccceEEEEeeCCceEEEEecCCcEEE-EEc-CCe-eEEeecccc
Q psy7977 414 GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVI-YSS-NHK-LVFSNVNLR 490 (1225)
Q Consensus 414 ~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~~g~~~Vfa~sdrP~li-yss-~g~-l~~~pl~~~ 490 (1225)
..+.|+++=-||.|-.|.+|.....+ ..+.+|-..|+.-..|..+|.+.||+.|.|+++- |.- ..+ -++.|+...
T Consensus 224 ~~plllvaG~d~~lrifqvDGk~N~~--lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~ 301 (514)
T KOG2055|consen 224 TAPLLLVAGLDGTLRIFQVDGKVNPK--LQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGV 301 (514)
T ss_pred CCceEEEecCCCcEEEEEecCccChh--heeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCc
Confidence 46778888889999999999654331 1234566667766666667888888888888754 432 222 345665554
Q ss_pred cccccccCCCCCCCCeEEEEeCCeEEEEEEcCCCCeeeEEEeCCCcccEEEEecCCCEEEEEE
Q psy7977 491 QVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 491 ~v~~~s~F~se~~p~glv~vs~~~LrI~~i~~~~~l~ir~IpLg~TprrIay~p~s~~~vV~t 553 (1225)
+=.++-.|--..+.+ ++++.++.=.|--+....+-.+-++.+...++-++++..++.+++.+
T Consensus 302 e~~~~e~FeVShd~~-fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~ 363 (514)
T KOG2055|consen 302 EEKSMERFEVSHDSN-FIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASG 363 (514)
T ss_pred ccchhheeEecCCCC-eEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEc
Confidence 434555553333333 67777766666666666777888999999999999999998888876
No 89
>KOG0650|consensus
Probab=78.69 E-value=1e+02 Score=38.68 Aligned_cols=208 Identities=15% Similarity=0.169 Sum_probs=99.6
Q ss_pred ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCC---CcceEEee-cC
Q psy7977 323 TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP---SLEEVCKE-PL 398 (1225)
Q Consensus 323 sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~---~Le~v~~~-~L 398 (1225)
++|++-+.|+..+ ..+...+++.+|.|++.++.++ ..++||+.- ..+.|++-- .++.-.++ .|
T Consensus 420 dDGtvriWEi~Tg--Rcvr~~~~d~~I~~vaw~P~~~---------~~vLAvA~~--~~~~ivnp~~G~~~e~~~t~ell 486 (733)
T KOG0650|consen 420 DDGTVRIWEIATG--RCVRTVQFDSEIRSVAWNPLSD---------LCVLAVAVG--ECVLIVNPIFGDRLEVGPTKELL 486 (733)
T ss_pred CCCcEEEEEeecc--eEEEEEeecceeEEEEecCCCC---------ceeEEEEec--CceEEeCccccchhhhcchhhhh
Confidence 4688888887643 4456678899999999998642 456777764 445554421 12221121 22
Q ss_pred CC---CCCc----------------ccEEEE-eeCCeeEEEEEECCCcEEEEEEcCC-C-----CccccceeeeecCccc
Q psy7977 399 GG---EIIP----------------RSILMT-CFEGHCYLLVALGDGSMFYFSLDPA-S-----GRLTDKKKVTLGTQPT 452 (1225)
Q Consensus 399 ~~---~~~P----------------~SIll~-~l~~~~~LlVGl~nG~L~~y~ld~~-s-----g~Ls~~k~~~LG~~pV 452 (1225)
.. ..-| .++++. .......=+=-++.|.++....... + .+|+.+++
T Consensus 487 ~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~s-------- 558 (733)
T KOG0650|consen 487 ASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKS-------- 558 (733)
T ss_pred hcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccc--------
Confidence 10 0111 012211 1111111122345555554433211 0 02222221
Q ss_pred eEEEE-eeCCc-eEEEEecCCcEEEEEcCCeeEEeecccc--------cccccccCCCCCCCCeEEEEeCCeEEEEEEcC
Q psy7977 453 VLKTF-RSLST-TNVFACSDRPTVIYSSNHKLVFSNVNLR--------QVNHMCSLNAESYPDSLALATDSTFTFGTIDE 522 (1225)
Q Consensus 453 ~L~~~-~~~g~-~~Vfa~sdrP~liyss~g~l~~~pl~~~--------~v~~~s~F~se~~p~glv~vs~~~LrI~~i~~ 522 (1225)
..|| +..|. .+|.....+|+++...+..+++..+.-. ....++.|....-++-+++.+- .=++|++|-
T Consensus 559 -Q~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~-d~k~~WfDl 636 (733)
T KOG0650|consen 559 -QSPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSY-DKKMCWFDL 636 (733)
T ss_pred -cCchhhcCCceeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecC-CCeeEEEEc
Confidence 1222 11221 2333344455544444444444444322 1223344443334455554432 224455543
Q ss_pred C-CCeeeEEEeCCC-cccEEEEecCCCEEEEEE
Q psy7977 523 I-QKLHIRTVPLGE-APRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 523 ~-~~l~ir~IpLg~-TprrIay~p~s~~~vV~t 553 (1225)
. ..-+.+++.+.+ ..|.++||+....|+.+.
T Consensus 637 dlsskPyk~lr~H~~avr~Va~H~ryPLfas~s 669 (733)
T KOG0650|consen 637 DLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGS 669 (733)
T ss_pred ccCcchhHHhhhhhhhhhhhhhccccceeeeec
Confidence 2 234566666654 789999999999999996
No 90
>KOG0278|consensus
Probab=78.09 E-value=52 Score=37.10 Aligned_cols=145 Identities=22% Similarity=0.308 Sum_probs=86.8
Q ss_pred Ccc-eEeEeeeCCCCCCccEEEEEcCCceE-EEEE-cCceeeeeccCCcccccCeEEEEeeCCCeEEEEc-cCcEEEEec
Q psy7977 217 GIK-GIWALSIGSPKNLDNTLVLSFVGHTR-VLTL-SGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVT-PSAAILIST 292 (1225)
Q Consensus 217 gv~-~iWtl~~~~~~~~d~yLVlSf~~~T~-Vl~i-~ge~veEv~~sgF~~~~~TL~ag~l~~~~iVQVT-~~~IRli~~ 292 (1225)
+|+ .+|... |+-++-|-.+.|. +.-. ++.++. .-.|......+.+.+ +++||-++ -++|...+.
T Consensus 145 ~Ir~v~wc~e-------D~~iLSSadd~tVRLWD~rTgt~v~---sL~~~s~VtSlEvs~--dG~ilTia~gssV~Fwda 212 (334)
T KOG0278|consen 145 GIRTVLWCHE-------DKCILSSADDKTVRLWDHRTGTEVQ---SLEFNSPVTSLEVSQ--DGRILTIAYGSSVKFWDA 212 (334)
T ss_pred cceeEEEecc-------CceEEeeccCCceEEEEeccCcEEE---EEecCCCCcceeecc--CCCEEEEecCceeEEecc
Confidence 443 667653 4455555445553 3332 222333 333445545555443 56677665 566888888
Q ss_pred CCcceeeeecCCCCCcEEEEEecCC-EEEEE--ECCeEEEEEeecc-ceeEEeeeccCceeEEEEeccCCCCCCCCcccc
Q psy7977 293 ESKARVSSWEPPNGKSISVVSCNKN-QVLCA--TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAK 368 (1225)
Q Consensus 293 ~~~~~i~eW~~p~g~~Iv~As~n~~-~VlVa--sgg~Lv~feid~~-~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~ 368 (1225)
++...+...+.|- .|.+||.... -+.|+ .+.-+..|+.+.+ ++... .+.--..|-|+..+|-
T Consensus 213 ksf~~lKs~k~P~--nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~-nkgh~gpVhcVrFSPd----------- 278 (334)
T KOG0278|consen 213 KSFGLLKSYKMPC--NVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSY-NKGHFGPVHCVRFSPD----------- 278 (334)
T ss_pred ccccceeeccCcc--ccccccccCCCceEEecCcceEEEEEeccCCceeeec-ccCCCCceEEEEECCC-----------
Confidence 7767778877774 5899998754 45555 3444555555544 22221 2333467889988763
Q ss_pred CcEEEEEEecCCeEEEEeCC
Q psy7977 369 AQLAAVGLWTDISARLLSLP 388 (1225)
Q Consensus 369 s~~laVG~w~d~tv~IlsL~ 388 (1225)
....|.|.. ||+|+||...
T Consensus 279 GE~yAsGSE-DGTirlWQt~ 297 (334)
T KOG0278|consen 279 GELYASGSE-DGTIRLWQTT 297 (334)
T ss_pred CceeeccCC-CceEEEEEec
Confidence 346888886 9999999873
No 91
>KOG0277|consensus
Probab=77.52 E-value=8.4 Score=43.18 Aligned_cols=74 Identities=18% Similarity=0.276 Sum_probs=59.5
Q ss_pred EEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeC-CcEEEEEEEEecCceeeeccc---cCeEEEEeC-CEEEEEEc
Q psy7977 1035 SKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDD-GKLQQIAEKEIKGACYSMCEF---NGKLLASIN-STVRLFEW 1109 (1225)
Q Consensus 1035 v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~-~kL~lv~~~ev~G~v~al~~f---~G~LLa~vg-~~l~vy~l 1109 (1225)
++|.-=-+.+++|.|+..++ ....|||++.++.+ +.+..+.+-++..+.+.++-- ...+++|+| .+|++|++
T Consensus 14 vqfSPf~~nrLavAt~q~yG---l~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~ 90 (311)
T KOG0277|consen 14 VQFSPFVENRLAVATAQHYG---LAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDL 90 (311)
T ss_pred eEecccccchhheeehhhcc---cccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEecc
Confidence 45533234689999998776 57799999999975 589999999999999998855 356888998 79999998
Q ss_pred CC
Q psy7977 1110 TN 1111 (1225)
Q Consensus 1110 ~~ 1111 (1225)
..
T Consensus 91 ~~ 92 (311)
T KOG0277|consen 91 TM 92 (311)
T ss_pred CC
Confidence 75
No 92
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=76.55 E-value=1.9e+02 Score=38.13 Aligned_cols=97 Identities=13% Similarity=0.236 Sum_probs=63.5
Q ss_pred CeEEE--EccCcEEEEecCCcceeeeecCCCCCcEEEE-------EecCCEEEEE-ECCeEEEEEeecc--ceeEEeeec
Q psy7977 277 RTVLQ--VTPSAAILISTESKARVSSWEPPNGKSISVV-------SCNKNQVLCA-TGCDVYYLEVHGS--EIKQLAHRA 344 (1225)
Q Consensus 277 ~~iVQ--VT~~~IRli~~~~~~~i~eW~~p~g~~Iv~A-------s~n~~~VlVa-sgg~Lv~feid~~--~L~ev~~~~ 344 (1225)
+.|+| ..++.+..+|.+.++++.+|+.....+|+.- ...+.+.++. ++..|+.....-. .+..-..++
T Consensus 494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~ 573 (794)
T PF08553_consen 494 NMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQ 573 (794)
T ss_pred ceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccc
Confidence 46676 4578899999998999999998654434432 2245677776 7777755433211 233222222
Q ss_pred --cCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEe
Q psy7977 345 --LEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLS 386 (1225)
Q Consensus 345 --l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~Ils 386 (1225)
-....+|++-. ...++|||.. +|.||+|+
T Consensus 574 Y~~~~~Fs~~aTt------------~~G~iavgs~-~G~IRLyd 604 (794)
T PF08553_consen 574 YSSKNNFSCFATT------------EDGYIAVGSN-KGDIRLYD 604 (794)
T ss_pred cccCCCceEEEec------------CCceEEEEeC-CCcEEeec
Confidence 24566788753 3568999997 99999997
No 93
>KOG0316|consensus
Probab=76.33 E-value=1.2e+02 Score=34.14 Aligned_cols=127 Identities=17% Similarity=0.258 Sum_probs=73.8
Q ss_pred CcEEEEecCCcceeeeecCCCCCcEEEEEec-C-CEEEEE-ECCeEEEEEeeccce-eEE-eeeccCceeEEEEeccCCC
Q psy7977 285 SAAILISTESKARVSSWEPPNGKSISVVSCN-K-NQVLCA-TGCDVYYLEVHGSEI-KQL-AHRALEYEVACLDISPLSN 359 (1225)
Q Consensus 285 ~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n-~-~~VlVa-sgg~Lv~feid~~~L-~ev-~~~~l~~eIScLai~~~~~ 359 (1225)
..+|.++...++...+. -|.+|++.++. + +++++. -++.|.++.-+.++| .+. .++.++...-|--.
T Consensus 165 GtvRtydiR~G~l~sDy---~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~----- 236 (307)
T KOG0316|consen 165 GTVRTYDIRKGTLSSDY---FGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLN----- 236 (307)
T ss_pred CcEEEEEeecceeehhh---cCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeec-----
Confidence 34666665433444443 45678887775 3 455554 588888876555543 332 35556665543211
Q ss_pred CCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEee---CCeeEEEEEECCCcEEEEEE
Q psy7977 360 EETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCF---EGHCYLLVALGDGSMFYFSL 432 (1225)
Q Consensus 360 ~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l---~~~~~LlVGl~nG~L~~y~l 432 (1225)
.+.-.+++...||.|.+|+|-+-.+++.-..+ .-+.+..+ +..+-+++.+..|.+..|.-
T Consensus 237 --------qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~-----~~v~v~dl~~hp~~~~f~~A~~~~~~~~~~~ 299 (307)
T KOG0316|consen 237 --------QSDTHVFSGSEDGKVYFWDLVDETQISKLSVV-----STVIVTDLSCHPTMDDFITATGHGDLFWYQE 299 (307)
T ss_pred --------ccceeEEeccCCceEEEEEeccceeeeeeccC-----CceeEEeeecccCccceeEecCCceeceeeh
Confidence 13334556566999999999775555543332 11222222 23566889999999888763
No 94
>KOG0315|consensus
Probab=76.06 E-value=1.1e+02 Score=34.69 Aligned_cols=166 Identities=14% Similarity=0.203 Sum_probs=96.2
Q ss_pred eeEEEEEEECCCCcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCc--EEEEEEE
Q psy7977 1003 EVHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGK--LQQIAEK 1080 (1225)
Q Consensus 1003 ~~s~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~k--L~lv~~~ 1080 (1225)
+-+.+|+-|-.+.+.-- +|+-+-.+.+++ + +.+..-+++|+ -.|+|.+|++.++. -+++-
T Consensus 103 eDgt~kIWdlR~~~~qR--~~~~~spVn~vv---l-hpnQteLis~d----------qsg~irvWDl~~~~c~~~liP-- 164 (311)
T KOG0315|consen 103 EDGTVKIWDLRSLSCQR--NYQHNSPVNTVV---L-HPNQTELISGD----------QSGNIRVWDLGENSCTHELIP-- 164 (311)
T ss_pred CCceEEEEeccCcccch--hccCCCCcceEE---e-cCCcceEEeec----------CCCcEEEEEccCCccccccCC--
Confidence 33678888877633322 334444555553 2 23456677774 27999999998752 23333
Q ss_pred EecCceeeeccc-cCeEEEEeCCE--EEEEEcCCCc---eee--eeeccc-ceeEEEEEEEECCEEEEeeccccEEEEEE
Q psy7977 1081 EIKGACYSMCEF-NGKLLASINST--VRLFEWTNEK---ELR--LECSHF-NNIIALFLKVKGDFILVGDLMRSLTLLQY 1151 (1225)
Q Consensus 1081 ev~G~v~al~~f-~G~LLa~vg~~--l~vy~l~~~~---~L~--~e~~~~-~~~i~~~l~~~g~~IlvGD~~kSv~~l~y 1151 (1225)
|.+-++++++-. .|..|+|+|+| +.+|++-.++ .|. ....+. .+.+-+-+...+.++...-+=+-+.+..
T Consensus 165 e~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn- 243 (311)
T KOG0315|consen 165 EDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWN- 243 (311)
T ss_pred CCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEe-
Confidence 334678888766 79999999875 6777764433 222 111222 1222222323345666666666665543
Q ss_pred ecCCCeEEEEeccCCCceeEEEEeeeCCcEEEE-cCCC
Q psy7977 1152 KTMEGSFEEISRDYNPNWMTSIEILDDELFLGA-ENSY 1188 (1225)
Q Consensus 1152 ~~~~~~L~~~arD~~~~wvta~~~Ld~dt~l~a-D~~g 1188 (1225)
.+..-..++.-+-..||+=.+.|=-++.||+. ..++
T Consensus 244 -~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~ 280 (311)
T KOG0315|consen 244 -TDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDH 280 (311)
T ss_pred -cCCceeeEEEeecCCceEEeeeeccCccEEEecCCCC
Confidence 33333444555667799999999877765554 4443
No 95
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=75.55 E-value=68 Score=35.54 Aligned_cols=130 Identities=13% Similarity=0.100 Sum_probs=75.6
Q ss_pred ceEEEEEEEeCCcEEEEEEEEecCceeeecc-ccCeEEEEeCCEEEEEEcCCCceee-eee--cccceeEEEEEEEE-CC
Q psy7977 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCE-FNGKLLASINSTVRLFEWTNEKELR-LEC--SHFNNIIALFLKVK-GD 1135 (1225)
Q Consensus 1061 ~GrI~vf~i~~~kL~lv~~~ev~G~v~al~~-f~G~LLa~vg~~l~vy~l~~~~~L~-~e~--~~~~~~i~~~l~~~-g~ 1135 (1225)
.|+|+.|+...++.+. .+..+++.+... -+|+|+++....++++++...+.-. ++. ...+...+..+.+. .+
T Consensus 21 ~~~i~~~~~~~~~~~~---~~~~~~~G~~~~~~~g~l~v~~~~~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G 97 (246)
T PF08450_consen 21 GGRIYRVDPDTGEVEV---IDLPGPNGMAFDRPDGRLYVADSGGIAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDG 97 (246)
T ss_dssp TTEEEEEETTTTEEEE---EESSSEEEEEEECTTSEEEEEETTCEEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS
T ss_pred CCEEEEEECCCCeEEE---EecCCCceEEEEccCCEEEEEEcCceEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCC
Confidence 4566666555444444 233345555444 3799999999999999987654322 221 11122224555543 35
Q ss_pred EEEEeeccccE-------EEEEEecCCCeEEEEeccCCCceeEEEEeeeCC-cEEEEcCCCc-EEEEEeC
Q psy7977 1136 FILVGDLMRSL-------TLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE-LFLGAENSYN-LFICQKD 1196 (1225)
Q Consensus 1136 ~IlvGD~~kSv-------~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~d-t~l~aD~~gN-l~vl~~~ 1196 (1225)
.++++|+.... .+++++++ .+...+..+... .-.+++-.++ ++.++|...+ |+.+.++
T Consensus 98 ~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~--pNGi~~s~dg~~lyv~ds~~~~i~~~~~~ 164 (246)
T PF08450_consen 98 NLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGF--PNGIAFSPDGKTLYVADSFNGRIWRFDLD 164 (246)
T ss_dssp -EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESS--EEEEEEETTSSEEEEEETTTTEEEEEEEE
T ss_pred CEEEEecCCCccccccccceEEECCC-CeEEEEecCccc--ccceEECCcchheeecccccceeEEEecc
Confidence 69999997653 57788887 777777766432 2344443333 6777887766 4444443
No 96
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=75.06 E-value=1.6e+02 Score=33.56 Aligned_cols=195 Identities=21% Similarity=0.273 Sum_probs=89.4
Q ss_pred ccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEEC
Q psy7977 344 ALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALG 423 (1225)
Q Consensus 344 ~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~ 423 (1225)
.+..++|.|+..+- ...+.+|.- ..+.|..+++. -+.+-..++.+..=|+.|.. +++..|++.-=+
T Consensus 19 g~~~e~SGLTy~pd----------~~tLfaV~d-~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y--~g~~~~vl~~Er 84 (248)
T PF06977_consen 19 GILDELSGLTYNPD----------TGTLFAVQD-EPGEIYELSLD-GKVLRRIPLDGFGDYEGITY--LGNGRYVLSEER 84 (248)
T ss_dssp T--S-EEEEEEETT----------TTEEEEEET-TTTEEEEEETT---EEEEEE-SS-SSEEEEEE---STTEEEEEETT
T ss_pred CccCCccccEEcCC----------CCeEEEEEC-CCCEEEEEcCC-CCEEEEEeCCCCCCceeEEE--ECCCEEEEEEcC
Confidence 34578999998762 234555554 37788777775 24444455654345677765 456667776667
Q ss_pred CCcEEEEEEcCCCCccccc--eeeeecCccce---EEEEee-CCceEEEEec-CCcEEEEEcCC-----eeEEeec-ccc
Q psy7977 424 DGSMFYFSLDPASGRLTDK--KKVTLGTQPTV---LKTFRS-LSTTNVFACS-DRPTVIYSSNH-----KLVFSNV-NLR 490 (1225)
Q Consensus 424 nG~L~~y~ld~~sg~Ls~~--k~~~LG~~pV~---L~~~~~-~g~~~Vfa~s-drP~liyss~g-----~l~~~pl-~~~ 490 (1225)
++.|+.++++..+..+... +...+|..... |--+.. ......|+.. ..|-.+|.-++ .+..... ...
T Consensus 85 ~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~ 164 (248)
T PF06977_consen 85 DQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLD 164 (248)
T ss_dssp TTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH
T ss_pred CCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccc
Confidence 9999999997654444322 22334433111 222211 1223344433 45555655332 1111110 000
Q ss_pred ----cccccccCCCCCCCCeEEEEeCCeEEEEEEcCCCCeeeEEEeCCC----------cccEEEEecCCCEEEEEE
Q psy7977 491 ----QVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLGE----------APRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 491 ----~v~~~s~F~se~~p~glv~vs~~~LrI~~i~~~~~l~ir~IpLg~----------TprrIay~p~s~~~vV~t 553 (1225)
.+...+..+-..-.+-+.+.++.+=++..++...+ ..+.++|.. +|--|++.+..++|+|.+
T Consensus 165 ~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~G~-~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsE 240 (248)
T PF06977_consen 165 DDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQGR-VVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSE 240 (248)
T ss_dssp -HT--SS---EEEEETTTTEEEEEETTTTEEEEE-TT---EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEET
T ss_pred cccceeccccceEEcCCCCeEEEEECCCCeEEEECCCCC-EEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcC
Confidence 11112222111112345555555555667775444 556677765 899999999999988875
No 97
>KOG0640|consensus
Probab=74.95 E-value=72 Score=36.97 Aligned_cols=217 Identities=15% Similarity=0.197 Sum_probs=111.1
Q ss_pred CEEEEE--ECCeEEEEEeeccceeEEeeecc--CceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcce
Q psy7977 317 NQVLCA--TGCDVYYLEVHGSEIKQLAHRAL--EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEE 392 (1225)
Q Consensus 317 ~~VlVa--sgg~Lv~feid~~~L~ev~~~~l--~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~ 392 (1225)
.+|+++ .++.+.+|+......+. ..+.+ .+.|-||+.-| ...|++||+. -.++++|.+.+.+-
T Consensus 184 e~ILiS~srD~tvKlFDfsK~saKr-A~K~~qd~~~vrsiSfHP-----------sGefllvgTd-Hp~~rlYdv~T~Qc 250 (430)
T KOG0640|consen 184 ETILISGSRDNTVKLFDFSKTSAKR-AFKVFQDTEPVRSISFHP-----------SGEFLLVGTD-HPTLRLYDVNTYQC 250 (430)
T ss_pred hheEEeccCCCeEEEEecccHHHHH-HHHHhhccceeeeEeecC-----------CCceEEEecC-CCceeEEeccceeE
Confidence 356665 36788888876321111 11111 24456777755 3679999996 88999999976443
Q ss_pred EEeecCCCCCCcccEEEEeeC--CeeEEEEEECCCcEEEEEEcCCCCccccceeeeecCccceEEEEeeCCceEEEEecC
Q psy7977 393 VCKEPLGGEIIPRSILMTCFE--GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSD 470 (1225)
Q Consensus 393 v~~~~L~~~~~P~SIll~~l~--~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~~g~~~Vfa~sd 470 (1225)
-.. +-|.+-.-.+|.-+... ++.| .-|..||.+-.+. ..++.--.+-.+.-|...|---.|. .+...|+-.|-
T Consensus 251 fvs-anPd~qht~ai~~V~Ys~t~~lY-vTaSkDG~IklwD--GVS~rCv~t~~~AH~gsevcSa~Ft-kn~kyiLsSG~ 325 (430)
T KOG0640|consen 251 FVS-ANPDDQHTGAITQVRYSSTGSLY-VTASKDGAIKLWD--GVSNRCVRTIGNAHGGSEVCSAVFT-KNGKYILSSGK 325 (430)
T ss_pred eee-cCcccccccceeEEEecCCccEE-EEeccCCcEEeec--cccHHHHHHHHhhcCCceeeeEEEc-cCCeEEeecCC
Confidence 211 11222222345444443 3444 3467788876653 2222100000011122222211221 11233333332
Q ss_pred CcEEEE--EcCCe--eEEeecc---cccccccccCCCCCCCCeEEEEeCCeEEEEEEcCCCCeeeEEEeCC--CcccEEE
Q psy7977 471 RPTVIY--SSNHK--LVFSNVN---LRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEIQKLHIRTVPLG--EAPRRIA 541 (1225)
Q Consensus 471 rP~liy--ss~g~--l~~~pl~---~~~v~~~s~F~se~~p~glv~vs~~~LrI~~i~~~~~l~ir~IpLg--~TprrIa 541 (1225)
-..+-. -+.|| ..|+.-. ......-+.|+. -++.+++.++.+-.+|.-+....=..+..+|| ..+|-|.
T Consensus 326 DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNh--tEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~ 403 (430)
T KOG0640|consen 326 DSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNH--TEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIV 403 (430)
T ss_pred cceeeeeeecCCceEEEEecCCcccchhhhhhhhhcC--ccceEEccccccCceeeccccchhhhhhcccCCCCCceEEE
Confidence 221110 01222 2333321 122334455643 24667788888888888887655455667777 5799999
Q ss_pred EecCCCEEEEEE
Q psy7977 542 YQESSQTFGVIT 553 (1225)
Q Consensus 542 y~p~s~~~vV~t 553 (1225)
++|....|.-..
T Consensus 404 HSP~~p~FmTcs 415 (430)
T KOG0640|consen 404 HSPVEPAFMTCS 415 (430)
T ss_pred eCCCCCceeeec
Confidence 999999887664
No 98
>KOG4378|consensus
Probab=74.05 E-value=56 Score=39.90 Aligned_cols=158 Identities=11% Similarity=0.150 Sum_probs=86.1
Q ss_pred CcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeC-CeeEEEEEECCCcEEEEEEcCCCCccccceeee-
Q psy7977 369 AQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE-GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVT- 446 (1225)
Q Consensus 369 s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~-~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~- 446 (1225)
+.+++-|.. .+.|.||.|.. +.++. .|. +.. ..|..+..+ ...|+--+-..|.++.-.+.. + .|+.-
T Consensus 91 S~y~~sgG~-~~~Vkiwdl~~-kl~hr-~lk-dh~-stvt~v~YN~~DeyiAsvs~gGdiiih~~~t--~----~~tt~f 159 (673)
T KOG4378|consen 91 SLYEISGGQ-SGCVKIWDLRA-KLIHR-FLK-DHQ-STVTYVDYNNTDEYIASVSDGGDIIIHGTKT--K----QKTTTF 159 (673)
T ss_pred ceeeeccCc-CceeeehhhHH-HHHhh-hcc-CCc-ceeEEEEecCCcceeEEeccCCcEEEEeccc--C----ccccce
Confidence 456666654 89999999962 12221 121 111 234444443 457787778888887755432 1 12111
Q ss_pred -ec-CccceEEEEeeCCceEEEEecCCcEEE-EEcCCeeEEeecccc-cccccccCCCCCCCCeEEEEeCCeEEEEEEcC
Q psy7977 447 -LG-TQPTVLKTFRSLSTTNVFACSDRPTVI-YSSNHKLVFSNVNLR-QVNHMCSLNAESYPDSLALATDSTFTFGTIDE 522 (1225)
Q Consensus 447 -LG-~~pV~L~~~~~~g~~~Vfa~sdrP~li-yss~g~l~~~pl~~~-~v~~~s~F~se~~p~glv~vs~~~LrI~~i~~ 522 (1225)
.+ .+.|++..+. .+.|-.|. -+.+|...++-++.. ++.++..-|+..| .|+.+...+.+.|..+.-
T Consensus 160 ~~~sgqsvRll~ys---------~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~-~gicfspsne~l~vsVG~ 229 (673)
T KOG4378|consen 160 TIDSGQSVRLLRYS---------PSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPC-RGICFSPSNEALLVSVGY 229 (673)
T ss_pred ecCCCCeEEEeecc---------cccceeeEeeccCCeEEEEeccCCCcccchhhhccCCc-CcceecCCccceEEEecc
Confidence 22 2344444332 22233222 345676777666543 3334444444444 367777778888888887
Q ss_pred CCCeeeEEEeCCCcccEEEEecCCC
Q psy7977 523 IQKLHIRTVPLGEAPRRIAYQESSQ 547 (1225)
Q Consensus 523 ~~~l~ir~IpLg~TprrIay~p~s~ 547 (1225)
..++.+--+.-.....+++|+.+..
T Consensus 230 Dkki~~yD~~s~~s~~~l~y~~Pls 254 (673)
T KOG4378|consen 230 DKKINIYDIRSQASTDRLTYSHPLS 254 (673)
T ss_pred cceEEEeecccccccceeeecCCcc
Confidence 7777666666666677777765444
No 99
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=73.68 E-value=1.6e+02 Score=35.82 Aligned_cols=31 Identities=35% Similarity=0.442 Sum_probs=22.8
Q ss_pred CcEEEEEEecCCeEEEEeCCCcceEEeecCC
Q psy7977 369 AQLAAVGLWTDISARLLSLPSLEEVCKEPLG 399 (1225)
Q Consensus 369 s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~ 399 (1225)
...++|++..+|.+++||||.|+.+....++
T Consensus 271 ~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~ 301 (395)
T PF08596_consen 271 GGYCLVCLFNNGSIRIYSLPSLKEIKSVSLP 301 (395)
T ss_dssp EEEEEEEEETTSEEEEEETTT--EEEEEE-S
T ss_pred CceEEEEEECCCcEEEEECCCchHhhcccCC
Confidence 4567777778999999999999998876664
No 100
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=73.41 E-value=90 Score=39.05 Aligned_cols=89 Identities=19% Similarity=0.248 Sum_probs=60.8
Q ss_pred EEEEEeeccceeEE--eeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCC-cceEEeecCCCCCC
Q psy7977 327 VYYLEVHGSEIKQL--AHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS-LEEVCKEPLGGEII 403 (1225)
Q Consensus 327 Lv~feid~~~L~ev--~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~-Le~v~~~~L~~~~~ 403 (1225)
-..+|+..+++..+ .+.++...+.|.+.++. ...+++||- ||+|.+|.... ... ..+. ..+
T Consensus 238 ~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~-----------E~kLvlGC~-DgSiiLyD~~~~~t~-~~ka---~~~ 301 (545)
T PF11768_consen 238 SCIYECSRNKLQRVSVTSIPLPSQVICCARSPS-----------EDKLVLGCE-DGSIILYDTTRGVTL-LAKA---EFI 301 (545)
T ss_pred EEEEEeecCceeEEEEEEEecCCcceEEecCcc-----------cceEEEEec-CCeEEEEEcCCCeee-eeee---ccc
Confidence 34567766666554 46778889999988763 568999998 99999999853 222 2121 134
Q ss_pred cccEEEEeeCCeeEEEEEECCCcEEEEEEc
Q psy7977 404 PRSILMTCFEGHCYLLVALGDGSMFYFSLD 433 (1225)
Q Consensus 404 P~SIll~~l~~~~~LlVGl~nG~L~~y~ld 433 (1225)
|..+.-. +++..++||-..|.+-.|.+.
T Consensus 302 P~~iaWH--p~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 302 PTLIAWH--PDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred ceEEEEc--CCCcEEEEEcCCceEEEEEee
Confidence 5433322 345678999999999998754
No 101
>KOG0294|consensus
Probab=72.55 E-value=1.1e+02 Score=35.82 Aligned_cols=172 Identities=19% Similarity=0.226 Sum_probs=97.3
Q ss_pred EEEEEECCCCcEEEEEECCCCCceEEEEEEEecCC-CCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEE-Eec
Q psy7977 1006 NLLIIDQNTFEILHAHQLFPGEYALSLISSKFGED-PNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEK-EIK 1083 (1225)
Q Consensus 1006 ~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~-~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~-ev~ 1083 (1225)
.|+|.|-.+...+..+- -++-++..++|... ....++-| ..-|.|.+|++. ..++++.- .-+
T Consensus 64 tI~IYDm~k~~qlg~ll----~HagsitaL~F~~~~S~shLlS~----------sdDG~i~iw~~~--~W~~~~slK~H~ 127 (362)
T KOG0294|consen 64 TIHIYDMRKRKQLGILL----SHAGSITALKFYPPLSKSHLLSG----------SDDGHIIIWRVG--SWELLKSLKAHK 127 (362)
T ss_pred cEEEEeccchhhhccee----ccccceEEEEecCCcchhheeee----------cCCCcEEEEEcC--CeEEeeeecccc
Confidence 45666655443332221 12335556677542 12344444 236899999985 57777764 447
Q ss_pred Cceeeeccc-cCeEEEEeC--CEEEEEEcCCCceee-eeecccceeEEEEEEEECCEEEEeeccccEEEEEEecCCCeEE
Q psy7977 1084 GACYSMCEF-NGKLLASIN--STVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFE 1159 (1225)
Q Consensus 1084 G~v~al~~f-~G~LLa~vg--~~l~vy~l~~~~~L~-~e~~~~~~~i~~~l~~~g~~IlvGD~~kSv~~l~y~~~~~~L~ 1159 (1225)
|.|+-|+-- .|||..+|| +++|+|+|-..+.-. +.-+..+.. +... .+|++.+|+=- . -+..|+.+..++
T Consensus 128 ~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~-v~w~-~~Gd~F~v~~~-~--~i~i~q~d~A~v- 201 (362)
T KOG0294|consen 128 GQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATL-VSWS-PQGDHFVVSGR-N--KIDIYQLDNASV- 201 (362)
T ss_pred cccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCccee-eEEc-CCCCEEEEEec-c--EEEEEecccHhH-
Confidence 888888744 799999988 799999996433111 111222222 2222 56664333211 1 133344433222
Q ss_pred EEeccCCCceeEEEEeeeCCcEEEEcCCCcEEEEEeCCCCC
Q psy7977 1160 EISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAAT 1200 (1225)
Q Consensus 1160 ~~arD~~~~wvta~~~Ld~dt~l~aD~~gNl~vl~~~~~~~ 1200 (1225)
|..=.+|.-..++.+++.++++++=.++++.+...+...+
T Consensus 202 -~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~ 241 (362)
T KOG0294|consen 202 -FREIENPKRILCATFLDGSELLVGGDNEWISLKDTDSDTP 241 (362)
T ss_pred -hhhhhccccceeeeecCCceEEEecCCceEEEeccCCCcc
Confidence 2233355667788999998877777778888877774433
No 102
>KOG0263|consensus
Probab=72.21 E-value=31 Score=43.99 Aligned_cols=109 Identities=15% Similarity=0.225 Sum_probs=76.9
Q ss_pred eEEEEeeCCCeEEEEccCcEEEEecCCcceeeeecCCCC----------CcEEEE--EecCCEEEEE-ECCeEEEEEeec
Q psy7977 268 TFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNG----------KSISVV--SCNKNQVLCA-TGCDVYYLEVHG 334 (1225)
Q Consensus 268 TL~ag~l~~~~iVQVT~~~IRli~~~~~~~i~eW~~p~g----------~~Iv~A--s~n~~~VlVa-sgg~Lv~feid~ 334 (1225)
-|++|.+++-.-++++|++-.+..+.+.+.+..|+.-.| .+|++- |.++.+++-+ .++.|.+..+..
T Consensus 529 RifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~ 608 (707)
T KOG0263|consen 529 RIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLAN 608 (707)
T ss_pred hhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCC
Confidence 578888888888999999988887765577788875332 234443 3467787776 678898988876
Q ss_pred cceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCC
Q psy7977 335 SEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS 389 (1225)
Q Consensus 335 ~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~ 389 (1225)
+.+...-+.. ...|.+|.++. .+.++|+|.- |++|++|++..
T Consensus 609 ~~~v~~l~~H-t~ti~SlsFS~-----------dg~vLasgg~-DnsV~lWD~~~ 650 (707)
T KOG0263|consen 609 GSLVKQLKGH-TGTIYSLSFSR-----------DGNVLASGGA-DNSVRLWDLTK 650 (707)
T ss_pred Ccchhhhhcc-cCceeEEEEec-----------CCCEEEecCC-CCeEEEEEchh
Confidence 5432211111 56677787753 4678899886 99999998853
No 103
>KOG0315|consensus
Probab=71.87 E-value=54 Score=36.96 Aligned_cols=96 Identities=11% Similarity=0.108 Sum_probs=61.8
Q ss_pred ECCeEEEEEeeccceeEEeeeccC-ceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCC
Q psy7977 323 TGCDVYYLEVHGSEIKQLAHRALE-YEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGE 401 (1225)
Q Consensus 323 sgg~Lv~feid~~~L~ev~~~~l~-~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~ 401 (1225)
....+-+|++..++-..+...+.. +.|+++.+.. ..+|+.-|.. ||+++|+.|..++. .-.+...
T Consensus 59 ~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~-----------dgrWMyTgse-Dgt~kIWdlR~~~~--qR~~~~~ 124 (311)
T KOG0315|consen 59 GNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQC-----------DGRWMYTGSE-DGTVKIWDLRSLSC--QRNYQHN 124 (311)
T ss_pred cCCeeEEEEccCCCCCceeEEeccCCceEEEEEee-----------cCeEEEecCC-CceEEEEeccCccc--chhccCC
Confidence 445677777765543344444433 6677776643 3678888987 99999999976322 1122112
Q ss_pred CCcccEEEEeeCCeeEEEEEECCCcEEEEEEcC
Q psy7977 402 IIPRSILMTCFEGHCYLLVALGDGSMFYFSLDP 434 (1225)
Q Consensus 402 ~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~ 434 (1225)
+...++++.. .+..|++|..+|.+-.+.+-.
T Consensus 125 spVn~vvlhp--nQteLis~dqsg~irvWDl~~ 155 (311)
T KOG0315|consen 125 SPVNTVVLHP--NQTELISGDQSGNIRVWDLGE 155 (311)
T ss_pred CCcceEEecC--CcceEEeecCCCcEEEEEccC
Confidence 3334565542 567899999999999988753
No 104
>KOG1408|consensus
Probab=71.77 E-value=42 Score=42.52 Aligned_cols=231 Identities=16% Similarity=0.252 Sum_probs=137.1
Q ss_pred cccceeccccchhhhhhhhhhhhcccCccccccceeeecccccCCCceecccccccCC--CCCcccCCCCCCCCcceeee
Q psy7977 927 NGERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEHCKGPVVEMSSLSYIKP--GSTKQSTANQPADFNMEVEV 1004 (1225)
Q Consensus 927 ~~~~~ll~~~~G~l~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~p--g~~~~~~~~~~~~~~~~~~~ 1004 (1225)
+++|..=+|.-|+|..-.+.-.+.|-+ =-|...+++.|.|-.| |+---|||...
T Consensus 470 ~gqhLAsGDr~GnlrVy~Lq~l~~~~~---------------~eAHesEilcLeyS~p~~~~kLLASasrd--------- 525 (1080)
T KOG1408|consen 470 DGQHLASGDRGGNLRVYDLQELEYTCF---------------MEAHESEILCLEYSFPVLTNKLLASASRD--------- 525 (1080)
T ss_pred CcceecccCccCceEEEEehhhhhhhh---------------eecccceeEEEeecCchhhhHhhhhccCC---------
Confidence 577888889999997655532210000 0112244788888777 33223443332
Q ss_pred EEEEEEECC-CCcEEEEEECCCCCceEEEEEEEecCC--CCeEEEEEeee--eCCCCCCCcceEEEEEEEeCCcEEEEEE
Q psy7977 1005 HNLLIIDQN-TFEILHAHQLFPGEYALSLISSKFGED--PNTYFVLGTAV--VHPEENEPKQGRIIIFHYDDGKLQQIAE 1079 (1225)
Q Consensus 1005 s~irlvdp~-t~~~i~~~eL~~nE~~~si~~v~~~~~--~~~~lvVGTa~--~~~eed~~~~GrI~vf~i~~~kL~lv~~ 1079 (1225)
--|.++|-. .+..+.++ +|+-.|+.+++|... +..+|--|.-+ +.--....+.|++..=. |.
T Consensus 526 RlIHV~Dv~rny~l~qtl----d~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~---------t~ 592 (1080)
T KOG1408|consen 526 RLIHVYDVKRNYDLVQTL----DGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRH---------TQ 592 (1080)
T ss_pred ceEEEEecccccchhhhh----cccccceeEEEEeecCCceEEEeccCchhhheehhccccCceecccc---------cc
Confidence 367888865 34433333 366678889999653 35677666543 11111334445543211 11
Q ss_pred EEecCceeeecc--ccCe-EEEEeCCEEEEEEcCCCceee---eeecccceeEEEEEEEECCEEEEeeccccEEEEEEec
Q psy7977 1080 KEIKGACYSMCE--FNGK-LLASINSTVRLFEWTNEKELR---LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKT 1153 (1225)
Q Consensus 1080 ~ev~G~v~al~~--f~G~-LLa~vg~~l~vy~l~~~~~L~---~e~~~~~~~i~~~l~~~g~~IlvGD~~kSv~~l~y~~ 1153 (1225)
+--++..|.|.- --++ +.+++..+||||+....|..+ ..-.+-+..|-+.++..|.+|...=.-|-++|+-|-.
T Consensus 593 t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~s 672 (1080)
T KOG1408|consen 593 TLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVS 672 (1080)
T ss_pred ccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEecc
Confidence 112344444432 2244 345677899999998666444 2122335555677777888888888888888888865
Q ss_pred CCCeEEEEeccCC-CceeEEEEeeeCC-cEEEEcCCCcEEEEEeCCC
Q psy7977 1154 MEGSFEEISRDYN-PNWMTSIEILDDE-LFLGAENSYNLFICQKDSA 1198 (1225)
Q Consensus 1154 ~~~~L~~~arD~~-~~wvta~~~Ld~d-t~l~aD~~gNl~vl~~~~~ 1198 (1225)
.+ .+|+=+. .--||.+.|+.+= .+|.+-.+|-|||.+++.+
T Consensus 673 gE----cvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~~ 715 (1080)
T KOG1408|consen 673 GE----CVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPLT 715 (1080)
T ss_pred ch----hhhhhcCcchheeeeeecccchhheeecCCceEEEEECchh
Confidence 43 2333333 3457888888664 7999999999999999865
No 105
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=71.56 E-value=1.5e+02 Score=35.56 Aligned_cols=176 Identities=17% Similarity=0.222 Sum_probs=91.6
Q ss_pred CcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCccccceeeeec
Q psy7977 369 AQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLG 448 (1225)
Q Consensus 369 s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~LG 448 (1225)
.++++|....+++|.|++..+.+.+..-.... .++.++.+. .+.-|+++.-+||.+.. +|..++++ .++...|
T Consensus 5 ~~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~-~~h~~~~~s--~Dgr~~yv~~rdg~vsv--iD~~~~~~--v~~i~~G 77 (369)
T PF02239_consen 5 GNLFYVVERGSGSVAVIDGATNKVVARIPTGG-APHAGLKFS--PDGRYLYVANRDGTVSV--IDLATGKV--VATIKVG 77 (369)
T ss_dssp GGEEEEEEGGGTEEEEEETTT-SEEEEEE-ST-TEEEEEE-T--T-SSEEEEEETTSEEEE--EETTSSSE--EEEEE-S
T ss_pred ccEEEEEecCCCEEEEEECCCCeEEEEEcCCC-CceeEEEec--CCCCEEEEEcCCCeEEE--EECCcccE--EEEEecC
Confidence 56777777779999999999888777654431 222223222 23468888889997654 45544443 2345567
Q ss_pred CccceEEEEeeCCceEEEEecC-CcEE-EEEcC--CeeEEeecccccc----cccccCCCCCCCCeEEEE-eC-CeEEEE
Q psy7977 449 TQPTVLKTFRSLSTTNVFACSD-RPTV-IYSSN--HKLVFSNVNLRQV----NHMCSLNAESYPDSLALA-TD-STFTFG 518 (1225)
Q Consensus 449 ~~pV~L~~~~~~g~~~Vfa~sd-rP~l-iyss~--g~l~~~pl~~~~v----~~~s~F~se~~p~glv~v-s~-~~LrI~ 518 (1225)
..|..+. +..+| ..+++.+- .+-+ ++..+ ..++..|...... ..++..-.......+++. .+ +.+-+.
T Consensus 78 ~~~~~i~-~s~DG-~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vV 155 (369)
T PF02239_consen 78 GNPRGIA-VSPDG-KYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVV 155 (369)
T ss_dssp SEEEEEE-E--TT-TEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEE
T ss_pred CCcceEE-EcCCC-CEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEE
Confidence 6665432 22233 34444443 2332 23322 2233333332211 111222111222335544 33 455544
Q ss_pred EEcCCCCeeeEEEeCCCcccEEEEecCCCEEEEEE
Q psy7977 519 TIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 519 ~i~~~~~l~ir~IpLg~TprrIay~p~s~~~vV~t 553 (1225)
...+...+..+.++.+..|+-..++|..+.|+++.
T Consensus 156 dy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~ 190 (369)
T PF02239_consen 156 DYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAA 190 (369)
T ss_dssp ETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEE
T ss_pred EeccccccceeeecccccccccccCcccceeeecc
Confidence 44445678889999999999999999999888875
No 106
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=71.42 E-value=1.6e+02 Score=31.96 Aligned_cols=170 Identities=14% Similarity=0.088 Sum_probs=96.5
Q ss_pred EEEEEEECCCCcEEEEEECCC-CCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEec
Q psy7977 1005 HNLLIIDQNTFEILHAHQLFP-GEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIK 1083 (1225)
Q Consensus 1005 s~irlvdp~t~~~i~~~eL~~-nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev~ 1083 (1225)
+.|..+|+.+.+.+.++.+.+ .....+.. +. ...++++++ ..|.|+.|+...|+ ++.+.+..
T Consensus 3 g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~---~~--~~~~v~~~~----------~~~~l~~~d~~tG~--~~W~~~~~ 65 (238)
T PF13360_consen 3 GTLSALDPRTGKELWSYDLGPGIGGPVATA---VP--DGGRVYVAS----------GDGNLYALDAKTGK--VLWRFDLP 65 (238)
T ss_dssp SEEEEEETTTTEEEEEEECSSSCSSEEETE---EE--ETTEEEEEE----------TTSEEEEEETTTSE--EEEEEECS
T ss_pred CEEEEEECCCCCEEEEEECCCCCCCccceE---EE--eCCEEEEEc----------CCCEEEEEECCCCC--EEEEeecc
Confidence 578999999999999999965 22222111 11 123555563 36788888876654 45555555
Q ss_pred Cceeee-ccccCeEEEEe-CCEEEEEEcCCCceeee--eec--ccceeEEEEEEEECCEEEEeeccccEEEEEEecCCCe
Q psy7977 1084 GACYSM-CEFNGKLLASI-NSTVRLFEWTNEKELRL--ECS--HFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGS 1157 (1225)
Q Consensus 1084 G~v~al-~~f~G~LLa~v-g~~l~vy~l~~~~~L~~--e~~--~~~~~i~~~l~~~g~~IlvGD~~kSv~~l~y~~~~~~ 1157 (1225)
+.+..- ....|+++++. ++.++.++....+.+-. ... .............+++++++.. +-.++.++.+.++
T Consensus 66 ~~~~~~~~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~l~~~d~~tG~ 143 (238)
T PF13360_consen 66 GPISGAPVVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTS--SGKLVALDPKTGK 143 (238)
T ss_dssp SCGGSGEEEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEET--CSEEEEEETTTTE
T ss_pred ccccceeeecccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEec--cCcEEEEecCCCc
Confidence 543332 33477887665 46677777554443321 111 0111112334445899999887 4446677877776
Q ss_pred EEEEeccCCCce---------eEEEEeeeCCcEEEEcCCCcEEEE
Q psy7977 1158 FEEISRDYNPNW---------MTSIEILDDELFLGAENSYNLFIC 1193 (1225)
Q Consensus 1158 L~~~arD~~~~w---------vta~~~Ld~dt~l~aD~~gNl~vl 1193 (1225)
+.---.=..+.. ..+.-.++++.+..+..++.++.+
T Consensus 144 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~ 188 (238)
T PF13360_consen 144 LLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGDGRVVAV 188 (238)
T ss_dssp EEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECCTSSEEEE
T ss_pred EEEEeecCCCCCCcceeeecccccceEEECCEEEEEcCCCeEEEE
Confidence 633222222221 124444455688888888875444
No 107
>KOG0646|consensus
Probab=69.94 E-value=1.3e+02 Score=36.78 Aligned_cols=102 Identities=16% Similarity=0.166 Sum_probs=60.1
Q ss_pred ccCeEEE-EeCCEEEEEEcCCCceeeeeeccccee-EEEEEEEECCEEEEeeccccEEEEEEe---------------cC
Q psy7977 1092 FNGKLLA-SINSTVRLFEWTNEKELRLECSHFNNI-IALFLKVKGDFILVGDLMRSLTLLQYK---------------TM 1154 (1225)
Q Consensus 1092 f~G~LLa-~vg~~l~vy~l~~~~~L~~e~~~~~~~-i~~~l~~~g~~IlvGD~~kSv~~l~y~---------------~~ 1154 (1225)
.++||.. +.-+++++|++....+|. ...||.. -++.++-.+-++++|-.--.++..-|- ++
T Consensus 187 ~~~rl~TaS~D~t~k~wdlS~g~LLl--ti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~ 264 (476)
T KOG0646|consen 187 TNARLYTASEDRTIKLWDLSLGVLLL--TITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEE 264 (476)
T ss_pred ccceEEEecCCceEEEEEeccceeeE--EEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccc
Confidence 4567764 578999999999888776 2233322 123343344555555554444443322 22
Q ss_pred CCeEEEEeccCCCceeEEEEeeeCC-cEEEEcCCCcEEEEEe
Q psy7977 1155 EGSFEEISRDYNPNWMTSIEILDDE-LFLGAENSYNLFICQK 1195 (1225)
Q Consensus 1155 ~~~L~~~arD~~~~wvta~~~Ld~d-t~l~aD~~gNl~vl~~ 1195 (1225)
.-++-.+--..+..-+||.+.=-+. ..+.+|++|++.|-..
T Consensus 265 ~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi 306 (476)
T KOG0646|consen 265 NTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDI 306 (476)
T ss_pred cceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEec
Confidence 2333344444444567777665444 6889999999888654
No 108
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=68.92 E-value=13 Score=31.13 Aligned_cols=39 Identities=28% Similarity=0.446 Sum_probs=32.4
Q ss_pred eeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeC
Q psy7977 337 IKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL 387 (1225)
Q Consensus 337 L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL 387 (1225)
+..+..+.+..+|+|++-+|. .+.+|+|.. +|.|.|+.+
T Consensus 2 f~~~~~k~l~~~v~~~~w~P~-----------mdLiA~~t~-~g~v~v~Rl 40 (47)
T PF12894_consen 2 FRQLGEKNLPSRVSCMSWCPT-----------MDLIALGTE-DGEVLVYRL 40 (47)
T ss_pred cceecccCCCCcEEEEEECCC-----------CCEEEEEEC-CCeEEEEEC
Confidence 344566778889999999873 679999998 999999999
No 109
>KOG0772|consensus
Probab=66.34 E-value=3.3e+02 Score=33.84 Aligned_cols=249 Identities=18% Similarity=0.209 Sum_probs=119.6
Q ss_pred EEEccCcEEEEecCCcceeeeecC--------------C-CCC--cEEEEEecCCEEEEEEC-CeEEEEEeeccceeEEe
Q psy7977 280 LQVTPSAAILISTESKARVSSWEP--------------P-NGK--SISVVSCNKNQVLCATG-CDVYYLEVHGSEIKQLA 341 (1225)
Q Consensus 280 VQVT~~~IRli~~~~~~~i~eW~~--------------p-~g~--~Iv~As~n~~~VlVasg-g~Lv~feid~~~L~ev~ 341 (1225)
+-|-|+|.|++.+..---+.-|+. | ... +...-+.++.++|+++| .+..+|.=|..++.|..
T Consensus 173 l~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~ 252 (641)
T KOG0772|consen 173 LAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFS 252 (641)
T ss_pred eeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeee
Confidence 346688888887543223344431 1 222 23445567888888854 44545433322333422
Q ss_pred ee-----cc------CceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCC-cce--EEee-cCCCCCCc-c
Q psy7977 342 HR-----AL------EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS-LEE--VCKE-PLGGEIIP-R 405 (1225)
Q Consensus 342 ~~-----~l------~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~-Le~--v~~~-~L~~~~~P-~ 405 (1225)
+- +| -.+++|-...|.. +..| +-+..|+++|||.+.+ .++ |... .-.+.-+| .
T Consensus 253 KGDQYI~Dm~nTKGHia~lt~g~whP~~---------k~~F--lT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~t 321 (641)
T KOG0772|consen 253 KGDQYIRDMYNTKGHIAELTCGCWHPDN---------KEEF--LTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVT 321 (641)
T ss_pred ccchhhhhhhccCCceeeeeccccccCc---------ccce--EEecCCCcEEEEecCCchhheeEEeeccCCCcccCce
Confidence 21 12 1345555555531 1223 3344499999999974 222 2221 11112233 3
Q ss_pred cEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCccccceeeeecCccceEEEE-eeC--CceEEEEecCCcEEE-EEcCCe
Q psy7977 406 SILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTF-RSL--STTNVFACSDRPTVI-YSSNHK 481 (1225)
Q Consensus 406 SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~-~~~--g~~~Vfa~sdrP~li-yss~g~ 481 (1225)
+..... ....+-.|..||.+-.+..-. .+.+|+..+.= ... +.++|-...+.-.|. .+..+.
T Consensus 322 sC~~nr--dg~~iAagc~DGSIQ~W~~~~------------~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~t 387 (641)
T KOG0772|consen 322 SCAWNR--DGKLIAAGCLDGSIQIWDKGS------------RTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDT 387 (641)
T ss_pred eeecCC--CcchhhhcccCCceeeeecCC------------cccccceEeeeccCCCCceeEEEeccccchhhhccCCCc
Confidence 332221 334467788888887765421 22333333221 111 223332222333333 233455
Q ss_pred eEEeeccc--cccc----ccccCCCCCC---CCeEEEEeCC-------eEEEEEEcCCCCeeeEEEeCC-CcccEEEEec
Q psy7977 482 LVFSNVNL--RQVN----HMCSLNAESY---PDSLALATDS-------TFTFGTIDEIQKLHIRTVPLG-EAPRRIAYQE 544 (1225)
Q Consensus 482 l~~~pl~~--~~v~----~~s~F~se~~---p~glv~vs~~-------~LrI~~i~~~~~l~ir~IpLg-~TprrIay~p 544 (1225)
++++-|.. +++. -..+|....| |+-=+++++. .-.++-++...-=.+.+|++. ..+.|+++||
T Consensus 388 LKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~Whp 467 (641)
T KOG0772|consen 388 LKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHP 467 (641)
T ss_pred eeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecc
Confidence 66665532 1222 1334443332 4333333321 112333333332345667765 5899999999
Q ss_pred CCCEEEEEE
Q psy7977 545 SSQTFGVIT 553 (1225)
Q Consensus 545 ~s~~~vV~t 553 (1225)
..+-+.+++
T Consensus 468 kLNQi~~gs 476 (641)
T KOG0772|consen 468 KLNQIFAGS 476 (641)
T ss_pred hhhheeeec
Confidence 999999998
No 110
>KOG0299|consensus
Probab=65.99 E-value=3.2e+02 Score=33.47 Aligned_cols=59 Identities=19% Similarity=0.229 Sum_probs=41.7
Q ss_pred cCcEEEEEEecCCeEEEEeCCCcce-EEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEc
Q psy7977 368 KAQLAAVGLWTDISARLLSLPSLEE-VCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLD 433 (1225)
Q Consensus 368 ~s~~laVG~w~d~tv~IlsL~~Le~-v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld 433 (1225)
+...+-||-. |.++++|.+|+-.+ ++.- . ...+..++++ +..+++.|..||.+.-+.+-
T Consensus 297 reR~vtVGgr-DrT~rlwKi~eesqlifrg-~--~~sidcv~~I---n~~HfvsGSdnG~IaLWs~~ 356 (479)
T KOG0299|consen 297 RERCVTVGGR-DRTVRLWKIPEESQLIFRG-G--EGSIDCVAFI---NDEHFVSGSDNGSIALWSLL 356 (479)
T ss_pred ccceEEeccc-cceeEEEeccccceeeeeC-C--CCCeeeEEEe---cccceeeccCCceEEEeeec
Confidence 4677888987 99999999986332 3321 1 2344566666 36789999999999887653
No 111
>KOG0288|consensus
Probab=65.64 E-value=17 Score=43.25 Aligned_cols=91 Identities=25% Similarity=0.350 Sum_probs=66.6
Q ss_pred EEEEEEECCCCcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEecC
Q psy7977 1005 HNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKG 1084 (1225)
Q Consensus 1005 s~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev~G 1084 (1225)
-.+.++|-.++++.+.|.-+.+-.+.-...+.|.. +..|++-|. +-|++|+|++..+||+.+-+.....
T Consensus 363 dtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSp-d~~YvaAGS----------~dgsv~iW~v~tgKlE~~l~~s~s~ 431 (459)
T KOG0288|consen 363 DTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSP-DGSYVAAGS----------ADGSVYIWSVFTGKLEKVLSLSTSN 431 (459)
T ss_pred CceeeeecccccEEEEeeccccccccccceeEECC-CCceeeecc----------CCCcEEEEEccCceEEEEeccCCCC
Confidence 36889999999999998877776666666677754 458988885 4689999999999999888877755
Q ss_pred -ceeeecccc--Ce-EEEE-eCCEEEEE
Q psy7977 1085 -ACYSMCEFN--GK-LLAS-INSTVRLF 1107 (1225)
Q Consensus 1085 -~v~al~~f~--G~-LLa~-vg~~l~vy 1107 (1225)
+++++. ++ |+ ||+| -+..+.+|
T Consensus 432 ~aI~s~~-W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 432 AAITSLS-WNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred cceEEEE-EcCCCchhhcccCCcceEec
Confidence 677754 43 43 4433 44556555
No 112
>KOG2096|consensus
Probab=65.38 E-value=2.8e+02 Score=32.58 Aligned_cols=223 Identities=12% Similarity=0.108 Sum_probs=108.0
Q ss_pred CcEEEE--EecCCEEEEE-ECCeEEEEEeeccceeEEe----eeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecC
Q psy7977 307 KSISVV--SCNKNQVLCA-TGCDVYYLEVHGSEIKQLA----HRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379 (1225)
Q Consensus 307 ~~Iv~A--s~n~~~VlVa-sgg~Lv~feid~~~L~ev~----~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d 379 (1225)
..|+.. +.++.+++-+ .++.|.++.+++-.+.|-. ..+.+ ..+.+.+.|- ..-++|.+-..
T Consensus 87 ~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~d-hpT~V~FapD-----------c~s~vv~~~~g 154 (420)
T KOG2096|consen 87 KEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYD-HPTRVVFAPD-----------CKSVVVSVKRG 154 (420)
T ss_pred CceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCC-CceEEEECCC-----------cceEEEEEccC
Confidence 345543 4456777776 6788989888742222211 12223 4556666542 34466666668
Q ss_pred CeEEEEeCCCcceEEeecCC-----CCCCc--ccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCC-ccccceeeeec---
Q psy7977 380 ISARLLSLPSLEEVCKEPLG-----GEIIP--RSILMTCFEGHCYLLVALGDGSMFYFSLDPASG-RLTDKKKVTLG--- 448 (1225)
Q Consensus 380 ~tv~IlsL~~Le~v~~~~L~-----~~~~P--~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg-~Ls~~k~~~LG--- 448 (1225)
+++++|.+..-+. -.-.++ .-..| +++.+. -+|..+|-.+...-...+. -|-+-|-+.|+
T Consensus 155 ~~l~vyk~~K~~d-G~~~~~~v~~D~~~f~~kh~v~~i--------~iGiA~~~k~imsas~dt~i~lw~lkGq~L~~id 225 (420)
T KOG2096|consen 155 NKLCVYKLVKKTD-GSGSHHFVHIDNLEFERKHQVDII--------NIGIAGNAKYIMSASLDTKICLWDLKGQLLQSID 225 (420)
T ss_pred CEEEEEEeeeccc-CCCCcccccccccccchhcccceE--------EEeecCCceEEEEecCCCcEEEEecCCceeeeec
Confidence 8999999852111 000110 00112 233333 3455544443332211110 01111111222
Q ss_pred CccceEE--EEeeCCceEEEEecCCc----E-EEEEcCCeeE----Eeecccc-cccccccCCCCCCCCeEEEE-eCCeE
Q psy7977 449 TQPTVLK--TFRSLSTTNVFACSDRP----T-VIYSSNHKLV----FSNVNLR-QVNHMCSLNAESYPDSLALA-TDSTF 515 (1225)
Q Consensus 449 ~~pV~L~--~~~~~g~~~Vfa~sdrP----~-liyss~g~l~----~~pl~~~-~v~~~s~F~se~~p~glv~v-s~~~L 515 (1225)
+...+.+ .+.. ...-+-++|=.| | ++|..+|.++ ...|... .......|+.. ..-.+-+ .++..
T Consensus 226 tnq~~n~~aavSP-~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~--S~r~vtvSkDG~w 302 (420)
T KOG2096|consen 226 TNQSSNYDAAVSP-DGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNS--STRAVTVSKDGKW 302 (420)
T ss_pred cccccccceeeCC-CCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCC--cceeEEEecCCcE
Confidence 1111111 1111 223455556555 6 7787777553 3333322 22223334322 1233443 45788
Q ss_pred EEEEEcCCC-------CeeeEEEeC---CCcccEEEEecCCCEEEEEE
Q psy7977 516 TFGTIDEIQ-------KLHIRTVPL---GEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 516 rI~~i~~~~-------~l~ir~IpL---g~TprrIay~p~s~~~vV~t 553 (1225)
||..++-.- -+..-.+|| |..|-|+..+|+.+.+++.-
T Consensus 303 riwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~ 350 (420)
T KOG2096|consen 303 RIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF 350 (420)
T ss_pred EEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec
Confidence 888776431 133444666 46899999999999999885
No 113
>KOG0289|consensus
Probab=65.10 E-value=3.3e+02 Score=33.26 Aligned_cols=108 Identities=16% Similarity=0.196 Sum_probs=66.1
Q ss_pred EEEEecCCEEEEEE-CCeEEEEEeecc-ceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeC
Q psy7977 310 SVVSCNKNQVLCAT-GCDVYYLEVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL 387 (1225)
Q Consensus 310 v~As~n~~~VlVas-gg~Lv~feid~~-~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL 387 (1225)
.++..++.|++=++ ++...+-.+..+ .|..+....-+-+++|.++-|- +.++..|+. |+.|+||.|
T Consensus 309 ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpD-----------gLifgtgt~-d~~vkiwdl 376 (506)
T KOG0289|consen 309 LSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPD-----------GLIFGTGTP-DGVVKIWDL 376 (506)
T ss_pred eeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCC-----------ceEEeccCC-CceEEEEEc
Confidence 45566788888874 455544445444 4554433323345678777542 456666776 999999999
Q ss_pred CCcceEEeecCCCC-CCcccEEEEeeCCeeEEEEEECCCcEEEEEEc
Q psy7977 388 PSLEEVCKEPLGGE-IIPRSILMTCFEGHCYLLVALGDGSMFYFSLD 433 (1225)
Q Consensus 388 ~~Le~v~~~~L~~~-~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld 433 (1225)
..-..+. .+|+. ....+|.+.+ ++.||.++..||.+..+.+-
T Consensus 377 ks~~~~a--~Fpght~~vk~i~FsE--NGY~Lat~add~~V~lwDLR 419 (506)
T KOG0289|consen 377 KSQTNVA--KFPGHTGPVKAISFSE--NGYWLATAADDGSVKLWDLR 419 (506)
T ss_pred CCccccc--cCCCCCCceeEEEecc--CceEEEEEecCCeEEEEEeh
Confidence 7533222 23321 2224555443 56899999999998777664
No 114
>KOG2048|consensus
Probab=65.04 E-value=3.9e+02 Score=34.20 Aligned_cols=409 Identities=14% Similarity=0.154 Sum_probs=190.6
Q ss_pred CCeEEEEEcCCCEEEEEEEeCcccCCceeeeecEEEE---ecccCcceeEEEecCCeEEEEeecCCeEEEEEeeCCCCCC
Q psy7977 79 SERYLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVEL---LGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRSPDENG 155 (1225)
Q Consensus 79 ~~~~LL~~e~G~Ly~l~l~~d~~~~Gr~~Vs~i~i~~---~~tis~~SsL~~L~~g~LFvGS~~GDS~L~~i~~~~ddd~ 155 (1225)
.+++-++..+|.+=.=.+..+ +..++ .++-..-.+|+.-.+|.||-.+-.| .+..|....
T Consensus 37 S~~lAvsRt~g~IEiwN~~~~-----------w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg--~i~EwDl~~---- 99 (691)
T KOG2048|consen 37 SNQLAVSRTDGNIEIWNLSNN-----------WFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSG--SITEWDLHT---- 99 (691)
T ss_pred CCceeeeccCCcEEEEccCCC-----------ceeeEEEecCCCCceeeEEEccCCeEEeecCCc--eEEEEeccc----
Confidence 456777888887755544432 22222 2343444778888899999665544 555554432
Q ss_pred CceEEEeee-eccccceeeEEeeccccCCccEEEEEecCCCccEEEEeecceeeEEEEe-eCCCc-ceEeEeeeCCCCCC
Q psy7977 156 TYVSVMESF-TNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIEEHACI-DLPGI-KGIWALSIGSPKNL 232 (1225)
Q Consensus 156 ~~l~v~d~l-~NlgPI~D~~v~d~~~~~~~qLva~sG~g~~GsLrilR~GI~~~~~~s~-eLpgv-~~iWtl~~~~~~~~ 232 (1225)
+...-.+ .|-|+|-.|++-+. +.++...| .+|.|..+.-| +.++..- -|+-. .++.++.-+. .
T Consensus 100 --lk~~~~~d~~gg~IWsiai~p~----~~~l~Igc---ddGvl~~~s~~--p~~I~~~r~l~rq~sRvLslsw~~---~ 165 (691)
T KOG2048|consen 100 --LKQKYNIDSNGGAIWSIAINPE----NTILAIGC---DDGVLYDFSIG--PDKITYKRSLMRQKSRVLSLSWNP---T 165 (691)
T ss_pred --CceeEEecCCCcceeEEEeCCc----cceEEeec---CCceEEEEecC--CceEEEEeecccccceEEEEEecC---C
Confidence 2333333 55689999988663 23444443 33455444443 3333222 23322 3566665432 1
Q ss_pred ccEEEEEcCCc-eEEEEEc-Cceeeee--ccCCcccccCeEEEEeeCCCeEEEEccCcEEEEecCCcceeeeecCCCCCc
Q psy7977 233 DNTLVLSFVGH-TRVLTLS-GAEVEET--EMGGFTSDQQTFYCGNVDPRTVLQVTPSAAILISTESKARVSSWEPPNGKS 308 (1225)
Q Consensus 233 d~yLVlSf~~~-T~Vl~i~-ge~veEv--~~sgF~~~~~TL~ag~l~~~~iVQVT~~~IRli~~~~~~~i~eW~~p~g~~ 308 (1225)
+.-|+..-.+. -+++.+. +.++.-+ .-.+....++||.=+ ||....+. ++.+|+...++-|++..|.-
T Consensus 166 ~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWS-------v~~Lrd~t-I~sgDS~G~V~FWd~~~gTL 237 (691)
T KOG2048|consen 166 GTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWS-------VLFLRDST-IASGDSAGTVTFWDSIFGTL 237 (691)
T ss_pred ccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEE-------EEEeecCc-EEEecCCceEEEEcccCcch
Confidence 22233333333 2333221 1111100 111222223333322 33332222 23344446777887654421
Q ss_pred ----------EE--EEEecCCEEEEE-ECCeEEEEEeecc--ceeEEeeecc-CceeEEEEeccCCCCCCCCccccCcEE
Q psy7977 309 ----------IS--VVSCNKNQVLCA-TGCDVYYLEVHGS--EIKQLAHRAL-EYEVACLDISPLSNEETSSEPAKAQLA 372 (1225)
Q Consensus 309 ----------Iv--~As~n~~~VlVa-sgg~Lv~feid~~--~L~ev~~~~l-~~eIScLai~~~~~~~~~~~~~~s~~l 372 (1225)
+. +++-++++++.+ -++.+..|..... +......+++ .+.+-|++..+ ..+
T Consensus 238 iqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~-------------~~l 304 (691)
T KOG2048|consen 238 IQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIE-------------NAL 304 (691)
T ss_pred hhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeec-------------ceE
Confidence 22 223334677776 5666655544432 2222333443 46777887743 244
Q ss_pred EEEEecCCeEEEEeCCCcceEEeecCCCCCCcc-cEEEEeeCCeeEEEEEE-CCCcEEEEEEcC--CCCccccceeeeec
Q psy7977 373 AVGLWTDISARLLSLPSLEEVCKEPLGGEIIPR-SILMTCFEGHCYLLVAL-GDGSMFYFSLDP--ASGRLTDKKKVTLG 448 (1225)
Q Consensus 373 aVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~-SIll~~l~~~~~LlVGl-~nG~L~~y~ld~--~sg~Ls~~k~~~LG 448 (1225)
.-|.. |.++.|-++..+...... .+ ...|. ++..+ ....+|++-- .++. .-.++.. .+|+.
T Consensus 305 ~sgG~-d~~l~i~~s~~~~~~~h~-~~-~~~p~~~~v~~--a~~~~L~~~w~~h~v-~lwrlGS~~~~g~~--------- 369 (691)
T KOG2048|consen 305 ISGGR-DFTLAICSSREFKNMDHR-QK-NLFPASDRVSV--APENRLLVLWKAHGV-DLWRLGSVILQGEY--------- 369 (691)
T ss_pred Eecce-eeEEEEccccccCchhhh-cc-ccccccceeec--CccceEEEEeccccc-cceeccCccccccc---------
Confidence 44554 778877666542221111 11 22333 33222 2345555544 2222 2222221 11211
Q ss_pred CccceEEEEeeCCceEEEEecCCc---EEEEEcCCeeEEeecccccc------cccccCCCCCC-------CCeEEEEeC
Q psy7977 449 TQPTVLKTFRSLSTTNVFACSDRP---TVIYSSNHKLVFSNVNLRQV------NHMCSLNAESY-------PDSLALATD 512 (1225)
Q Consensus 449 ~~pV~L~~~~~~g~~~Vfa~sdrP---~liyss~g~l~~~pl~~~~v------~~~s~F~se~~-------p~glv~vs~ 512 (1225)
-+.+|..+...+...+-+++-.| |+.|+.-.+++++.+++++. ..+--+.-.++ .+-+++++.
T Consensus 370 -~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~st~~~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~ 448 (691)
T KOG2048|consen 370 -NYIHLLKLFTKEKENISCAAISPDGNLIAISTVSRTKIYRLQPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSK 448 (691)
T ss_pred -ChhhheeeecCCccceeeeccCCCCCEEEEeeccceEEEEeccCcceeEEEeccchhhhccceeeEEEecCceEEEEec
Confidence 12345555555555554444444 78888777777777666431 11111111111 122333332
Q ss_pred --CeEEEEEEcCCC-C--eeeEEEeCCCcccEEEEecCCCEEEEEEEe
Q psy7977 513 --STFTFGTIDEIQ-K--LHIRTVPLGEAPRRIAYQESSQTFGVITTR 555 (1225)
Q Consensus 513 --~~LrI~~i~~~~-~--l~ir~IpLg~TprrIay~p~s~~~vV~t~~ 555 (1225)
..|.+..++.-. + ....+-+--.+..+|+.+|..+.++++.++
T Consensus 449 ~~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~ 496 (691)
T KOG2048|consen 449 NIFSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAISTR 496 (691)
T ss_pred ccceeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEecc
Confidence 244444443321 1 111111455688999999999999999733
No 115
>KOG2394|consensus
Probab=64.42 E-value=18 Score=44.41 Aligned_cols=101 Identities=19% Similarity=0.421 Sum_probs=66.5
Q ss_pred Cceeeeccc-cCeEEEEeCC--EEEEEEcCCCceeeeeecccceeEEEEEEEECCEEEEeeccccEEEEEEecCCCeEEE
Q psy7977 1084 GACYSMCEF-NGKLLASINS--TVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEE 1160 (1225)
Q Consensus 1084 G~v~al~~f-~G~LLa~vg~--~l~vy~l~~~~~L~~e~~~~~~~i~~~l~~~g~~IlvGD~~kSv~~l~y~~~~~~L~~ 1160 (1225)
|++...|-+ .|+.||.|++ .||||++...++|-..-++|+-.+.+.=.-.|.+|+.|-==.=|++..|- +.++
T Consensus 291 g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~--erRV-- 366 (636)
T KOG2394|consen 291 GSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFE--ERRV-- 366 (636)
T ss_pred ccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEec--cceE--
Confidence 344444433 7899998875 79999998766554555678776556665678899999555556665553 4554
Q ss_pred Eecc-CCCceeEEEEeeeCC-------cEEEEcCCC
Q psy7977 1161 ISRD-YNPNWMTSIEILDDE-------LFLGAENSY 1188 (1225)
Q Consensus 1161 ~arD-~~~~wvta~~~Ld~d-------t~l~aD~~g 1188 (1225)
+||- -+.-||+.+.|=.|- ++.++|...
T Consensus 367 VARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~ 402 (636)
T KOG2394|consen 367 VARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTF 402 (636)
T ss_pred EEeccccccceeeEeecccccccccccccccccccc
Confidence 4553 567799999984332 455555543
No 116
>KOG0279|consensus
Probab=63.93 E-value=2.8e+02 Score=32.06 Aligned_cols=96 Identities=14% Similarity=0.212 Sum_probs=58.2
Q ss_pred CcEEEEecCCcceeeeecCCCCCcEEEEEec--CCEEEEE-ECCeEEEEEeeccceeEEeeecc-CceeEEEEeccCCCC
Q psy7977 285 SAAILISTESKARVSSWEPPNGKSISVVSCN--KNQVLCA-TGCDVYYLEVHGSEIKQLAHRAL-EYEVACLDISPLSNE 360 (1225)
Q Consensus 285 ~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n--~~~VlVa-sgg~Lv~feid~~~L~ev~~~~l-~~eIScLai~~~~~~ 360 (1225)
..+|+.|..+++....+.. ..+-+.+.+++ +.|++=. .+.+|.+..+-....-++ .... .++|+|+.+.|..
T Consensus 85 ~~lrlWDl~~g~~t~~f~G-H~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~-~~~~~~~WVscvrfsP~~-- 160 (315)
T KOG0279|consen 85 GTLRLWDLATGESTRRFVG-HTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTI-HEDSHREWVSCVRFSPNE-- 160 (315)
T ss_pred ceEEEEEecCCcEEEEEEe-cCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEE-ecCCCcCcEEEEEEcCCC--
Confidence 4467777665544444433 22345555554 4566554 467777765542211111 1223 6899999998742
Q ss_pred CCCCccccCcEEEEEEecCCeEEEEeCCCcce
Q psy7977 361 ETSSEPAKAQLAAVGLWTDISARLLSLPSLEE 392 (1225)
Q Consensus 361 ~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~ 392 (1225)
...+++=+.| |++|++++|.+++.
T Consensus 161 -------~~p~Ivs~s~-DktvKvWnl~~~~l 184 (315)
T KOG0279|consen 161 -------SNPIIVSASW-DKTVKVWNLRNCQL 184 (315)
T ss_pred -------CCcEEEEccC-CceEEEEccCCcch
Confidence 2556777778 99999999987654
No 117
>PHA02713 hypothetical protein; Provisional
Probab=63.50 E-value=1.7e+02 Score=37.26 Aligned_cols=182 Identities=14% Similarity=0.135 Sum_probs=95.9
Q ss_pred EEEEEEECCC--CcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEe
Q psy7977 1005 HNLLIIDQNT--FEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082 (1225)
Q Consensus 1005 s~irlvdp~t--~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev 1082 (1225)
+.+...||.+ |..+.. +...-.-.++ +.+ +...+|+|-.. + ......+..|+...++.+.+..-+.
T Consensus 320 ~~v~~Yd~~~n~W~~~~~--m~~~R~~~~~--~~~---~g~IYviGG~~--~---~~~~~sve~Ydp~~~~W~~~~~mp~ 387 (557)
T PHA02713 320 NKVYKINIENKIHVELPP--MIKNRCRFSL--AVI---DDTIYAIGGQN--G---TNVERTIECYTMGDDKWKMLPDMPI 387 (557)
T ss_pred ceEEEEECCCCeEeeCCC--CcchhhceeE--EEE---CCEEEEECCcC--C---CCCCceEEEEECCCCeEEECCCCCc
Confidence 4677788875 443322 2211111222 334 23677777521 1 1122346667766555544443222
Q ss_pred cCceeeeccccCeEEEEeC-------------------------CEEEEEEcCCCceeeeeecccceeEEEEEEEECCEE
Q psy7977 1083 KGACYSMCEFNGKLLASIN-------------------------STVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFI 1137 (1225)
Q Consensus 1083 ~G~v~al~~f~G~LLa~vg-------------------------~~l~vy~l~~~~~L~~e~~~~~~~i~~~l~~~g~~I 1137 (1225)
.-.-.+++.++|+|-+.=| +++..|+...++--.......+.. ...+.+.++.|
T Consensus 388 ~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~-~~~~~~~~~~I 466 (557)
T PHA02713 388 ALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTI-RPGVVSHKDDI 466 (557)
T ss_pred ccccccEEEECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCcccc-cCcEEEECCEE
Confidence 2122233455676654322 357778877665322222211111 12334566666
Q ss_pred EE-eecc---ccE-EEEEEecCC-CeEEEEeccCCCceeEEEEeeeCCcEEEEcCCCcEEEEEeCCCC
Q psy7977 1138 LV-GDLM---RSL-TLLQYKTME-GSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAA 1199 (1225)
Q Consensus 1138 lv-GD~~---kSv-~~l~y~~~~-~~L~~~arD~~~~wvta~~~Ld~dt~l~aD~~gNl~vl~~~~~~ 1199 (1225)
+| |..- ... ++-+|+++. ++-..++.=..+|..-.+..++..-|+.+--+|.--+-.|||..
T Consensus 467 Yv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~~~~iyv~Gg~~~~~~~e~yd~~~ 534 (557)
T PHA02713 467 YVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILHDNTIMMLHCYESYMLQDTFNVYT 534 (557)
T ss_pred EEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEECCEEEEEeeecceeehhhcCccc
Confidence 44 4321 112 356899998 79999887777888888888887755555445555567777764
No 118
>PHA03098 kelch-like protein; Provisional
Probab=63.07 E-value=1.9e+02 Score=36.08 Aligned_cols=183 Identities=14% Similarity=0.102 Sum_probs=91.4
Q ss_pred EEEEEEECCCCcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEecC
Q psy7977 1005 HNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKG 1084 (1225)
Q Consensus 1005 s~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev~G 1084 (1225)
+.+..+|+.+.+-...-++...-...++ +.+ +...+++|-.. .......+..|+...++.+.+..-+...
T Consensus 311 ~~v~~yd~~~~~W~~~~~~~~~R~~~~~--~~~---~~~lyv~GG~~-----~~~~~~~v~~yd~~~~~W~~~~~lp~~r 380 (534)
T PHA03098 311 NSVVSYDTKTKSWNKVPELIYPRKNPGV--TVF---NNRIYVIGGIY-----NSISLNTVESWKPGESKWREEPPLIFPR 380 (534)
T ss_pred ccEEEEeCCCCeeeECCCCCcccccceE--EEE---CCEEEEEeCCC-----CCEecceEEEEcCCCCceeeCCCcCcCC
Confidence 4677888876433221122211112222 233 23577777432 1222345667776665555444333222
Q ss_pred ceeeeccccCeEEEEeC--------CEEEEEEcCCCceeeeeecccceeEEEEEEEECCEEEE-eeccc------cEEEE
Q psy7977 1085 ACYSMCEFNGKLLASIN--------STVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILV-GDLMR------SLTLL 1149 (1225)
Q Consensus 1085 ~v~al~~f~G~LLa~vg--------~~l~vy~l~~~~~L~~e~~~~~~~i~~~l~~~g~~Ilv-GD~~k------Sv~~l 1149 (1225)
.-.+.+..+|++.+.=| +.+..|+...++--.......+.. .....+.++.|++ |=.-. .-.+.
T Consensus 381 ~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 459 (534)
T PHA03098 381 YNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHY-GGCAIYHDGKIYVIGGISYIDNIKVYNIVE 459 (534)
T ss_pred ccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCcccc-CceEEEECCEEEEECCccCCCCCcccceEE
Confidence 22333456777766433 457788876554222111111111 1122344555544 31110 11278
Q ss_pred EEecCCCeEEEEeccCCCceeEEEEeeeCC-cEEEEcCCC--cEEEEEeCCC
Q psy7977 1150 QYKTMEGSFEEISRDYNPNWMTSIEILDDE-LFLGAENSY--NLFICQKDSA 1198 (1225)
Q Consensus 1150 ~y~~~~~~L~~~arD~~~~wvta~~~Ld~d-t~l~aD~~g--Nl~vl~~~~~ 1198 (1225)
.|+++.++-..++.-..|++-.++..+++. .++|+.... .=.+..||++
T Consensus 460 ~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 511 (534)
T PHA03098 460 SYNPVTNKWTELSSLNFPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDK 511 (534)
T ss_pred EecCCCCceeeCCCCCcccccceEEEECCEEEEEcCCcCCcccceeEEEeCC
Confidence 899999999888876678887777777655 345554321 1134556655
No 119
>KOG2096|consensus
Probab=62.47 E-value=43 Score=38.82 Aligned_cols=49 Identities=14% Similarity=0.287 Sum_probs=36.3
Q ss_pred CeEEEEe-CCeEEEEEEcCCC----CeeeEEEeCCCcccEEEEecCCCEEEEEEE
Q psy7977 505 DSLALAT-DSTFTFGTIDEIQ----KLHIRTVPLGEAPRRIAYQESSQTFGVITT 554 (1225)
Q Consensus 505 ~glv~vs-~~~LrI~~i~~~~----~l~ir~IpLg~TprrIay~p~s~~~vV~t~ 554 (1225)
..|+-++ +..+|+..+.+.. +.--..++++ +|++++|.|.-+.++|.+.
T Consensus 99 K~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~d-hpT~V~FapDc~s~vv~~~ 152 (420)
T KOG2096|consen 99 KKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYD-HPTRVVFAPDCKSVVVSVK 152 (420)
T ss_pred ceeEEEeCCceEEEEecchhhhhhhhHhhccccCC-CceEEEECCCcceEEEEEc
Confidence 3555544 4689999988763 2333346666 9999999999999999984
No 120
>KOG0270|consensus
Probab=61.07 E-value=1.7e+02 Score=35.56 Aligned_cols=102 Identities=18% Similarity=0.225 Sum_probs=62.9
Q ss_pred CEEEEE--ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEE
Q psy7977 317 NQVLCA--TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVC 394 (1225)
Q Consensus 317 ~~VlVa--sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~ 394 (1225)
+.||.+ .+.++.+..++.++-... .....++|.|++..+. .+.+++-|+. |++|.++.+.+.....
T Consensus 256 ~nVLaSgsaD~TV~lWD~~~g~p~~s-~~~~~k~Vq~l~wh~~----------~p~~LLsGs~-D~~V~l~D~R~~~~s~ 323 (463)
T KOG0270|consen 256 RNVLASGSADKTVKLWDVDTGKPKSS-ITHHGKKVQTLEWHPY----------EPSVLLSGSY-DGTVALKDCRDPSNSG 323 (463)
T ss_pred ceeEEecCCCceEEEEEcCCCCccee-hhhcCCceeEEEecCC----------CceEEEeccc-cceEEeeeccCccccC
Confidence 345554 367888888876532221 1135688999999764 4678999998 9999999987522211
Q ss_pred ee-cCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEc
Q psy7977 395 KE-PLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLD 433 (1225)
Q Consensus 395 ~~-~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld 433 (1225)
.. ... .-.+.++... ....+.+||+.||.|..|.+-
T Consensus 324 ~~wk~~--g~VEkv~w~~-~se~~f~~~tddG~v~~~D~R 360 (463)
T KOG0270|consen 324 KEWKFD--GEVEKVAWDP-HSENSFFVSTDDGTVYYFDIR 360 (463)
T ss_pred ceEEec--cceEEEEecC-CCceeEEEecCCceEEeeecC
Confidence 11 111 1112222221 135678999999999888653
No 121
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=61.01 E-value=2.4e+02 Score=30.42 Aligned_cols=170 Identities=15% Similarity=0.103 Sum_probs=96.5
Q ss_pred EEEEEEECCCCcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEE-EEEEec
Q psy7977 1005 HNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQI-AEKEIK 1083 (1225)
Q Consensus 1005 s~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv-~~~ev~ 1083 (1225)
+.+..+|+.+.+.+.++++ +.+...+. .. . ...++|++ ..|+|+.|+..+|++.-- .....+
T Consensus 46 ~~l~~~d~~tG~~~W~~~~-~~~~~~~~--~~--~--~~~v~v~~----------~~~~l~~~d~~tG~~~W~~~~~~~~ 108 (238)
T PF13360_consen 46 GNLYALDAKTGKVLWRFDL-PGPISGAP--VV--D--GGRVYVGT----------SDGSLYALDAKTGKVLWSIYLTSSP 108 (238)
T ss_dssp SEEEEEETTTSEEEEEEEC-SSCGGSGE--EE--E--TTEEEEEE----------TTSEEEEEETTTSCEEEEEEE-SSC
T ss_pred CEEEEEECCCCCEEEEeec-ccccccee--ee--c--cccccccc----------ceeeeEecccCCcceeeeecccccc
Confidence 6899999999999999999 33322221 11 1 23445555 234888888666655433 232211
Q ss_pred --C--ceeeeccccCeEEEEe-CCEEEEEEcCCCceee-eeeccccee---------EEEEEEEECCEEEEeeccccEEE
Q psy7977 1084 --G--ACYSMCEFNGKLLASI-NSTVRLFEWTNEKELR-LECSHFNNI---------IALFLKVKGDFILVGDLMRSLTL 1148 (1225)
Q Consensus 1084 --G--~v~al~~f~G~LLa~v-g~~l~vy~l~~~~~L~-~e~~~~~~~---------i~~~l~~~g~~IlvGD~~kSv~~ 1148 (1225)
+ ...+...-.++++++. +..|+.++....+.+- ... ..+.. +...+...++++++++.-.. +
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~--~ 185 (238)
T PF13360_consen 109 PAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPV-GEPRGSSPISSFSDINGSPVISDGRVYVSSGDGR--V 185 (238)
T ss_dssp TCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEES-STT-SS--EEEETTEEEEEECCTTEEEEECCTSS--E
T ss_pred ccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeec-CCCCCCcceeeecccccceEEECCEEEEEcCCCe--E
Confidence 1 1122222267788887 8999999988666543 111 11110 01223234568888776665 3
Q ss_pred EEEecCCCeEEEEeccCCCceeEEEEeeeCCcEEEEcCCCcEEEEEeCC
Q psy7977 1149 LQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDS 1197 (1225)
Q Consensus 1149 l~y~~~~~~L~~~arD~~~~wvta~~~Ld~dt~l~aD~~gNl~vl~~~~ 1197 (1225)
+.++.+.++.. ..++... ..+.-..+.+.+++++++++++.+....
T Consensus 186 ~~~d~~tg~~~-w~~~~~~--~~~~~~~~~~~l~~~~~~~~l~~~d~~t 231 (238)
T PF13360_consen 186 VAVDLATGEKL-WSKPISG--IYSLPSVDGGTLYVTSSDGRLYALDLKT 231 (238)
T ss_dssp EEEETTTTEEE-EEECSS---ECECEECCCTEEEEEETTTEEEEEETTT
T ss_pred EEEECCCCCEE-EEecCCC--ccCCceeeCCEEEEEeCCCEEEEEECCC
Confidence 44466666644 3444222 3333445677888888999999988754
No 122
>KOG4378|consensus
Probab=60.80 E-value=50 Score=40.28 Aligned_cols=53 Identities=13% Similarity=0.407 Sum_probs=39.5
Q ss_pred cceEEEEEEEeCC----cEEEEEEEEecCceeeeccccCeEEEEeC--CEEEEEEcCCCce
Q psy7977 1060 KQGRIIIFHYDDG----KLQQIAEKEIKGACYSMCEFNGKLLASIN--STVRLFEWTNEKE 1114 (1225)
Q Consensus 1060 ~~GrI~vf~i~~~----kL~lv~~~ev~G~v~al~~f~G~LLa~vg--~~l~vy~l~~~~~ 1114 (1225)
..|-+.+|++... ..--.|+-+..|.+. ++-|..|+|.|| +||.+||.+.++.
T Consensus 185 d~G~VtlwDv~g~sp~~~~~~~HsAP~~gicf--spsne~l~vsVG~Dkki~~yD~~s~~s 243 (673)
T KOG4378|consen 185 DKGAVTLWDVQGMSPIFHASEAHSAPCRGICF--SPSNEALLVSVGYDKKINIYDIRSQAS 243 (673)
T ss_pred cCCeEEEEeccCCCcccchhhhccCCcCccee--cCCccceEEEecccceEEEeecccccc
Confidence 3789999999863 233466667777654 477999999888 8999999986553
No 123
>KOG4441|consensus
Probab=60.08 E-value=3.2e+02 Score=34.94 Aligned_cols=180 Identities=12% Similarity=0.099 Sum_probs=107.6
Q ss_pred EEEEEEECCC--CcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEe
Q psy7977 1005 HNLLIIDQNT--FEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082 (1225)
Q Consensus 1005 s~irlvdp~t--~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev 1082 (1225)
+++...||.+ |..+. .+...= .....+.+ ....+|||-.. + ...-..+-.|+...++...+.....
T Consensus 349 ~~ve~YD~~~~~W~~~a--~M~~~R--~~~~v~~l---~g~iYavGG~d--g---~~~l~svE~YDp~~~~W~~va~m~~ 416 (571)
T KOG4441|consen 349 SSVERYDPRTNQWTPVA--PMNTKR--SDFGVAVL---DGKLYAVGGFD--G---EKSLNSVECYDPVTNKWTPVAPMLT 416 (571)
T ss_pred ceEEEecCCCCceeccC--CccCcc--ccceeEEE---CCEEEEEeccc--c---ccccccEEEecCCCCcccccCCCCc
Confidence 6888899876 44432 232222 23333444 34788888543 1 1112234455555567888877666
Q ss_pred cCceeeeccccCeEEEEeC--------CEEEEEEcCCCceeeeeecccceeEEEEEEEECCEEE-Eeec-----cccEEE
Q psy7977 1083 KGACYSMCEFNGKLLASIN--------STVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFIL-VGDL-----MRSLTL 1148 (1225)
Q Consensus 1083 ~G~v~al~~f~G~LLa~vg--------~~l~vy~l~~~~~L~~e~~~~~~~i~~~l~~~g~~Il-vGD~-----~kSv~~ 1148 (1225)
.-.-.+++.++|+|-+.-| +++..|+-..++--...+..-.-. -..+.+.+++|+ +|.- .++ +
T Consensus 417 ~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~-~~g~a~~~~~iYvvGG~~~~~~~~~--V 493 (571)
T KOG4441|consen 417 RRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRS-GFGVAVLNGKIYVVGGFDGTSALSS--V 493 (571)
T ss_pred ceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccc-cceEEEECCEEEEECCccCCCccce--E
Confidence 5556667788999888766 788999988766322111111110 112445555444 4442 223 5
Q ss_pred EEEecCCCeEEEEeccCCCceeEEEEeeeCCcEEEEcCCCcEEE---EEeCCCC
Q psy7977 1149 LQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFI---CQKDSAA 1199 (1225)
Q Consensus 1149 l~y~~~~~~L~~~arD~~~~wvta~~~Ld~dt~l~aD~~gNl~v---l~~~~~~ 1199 (1225)
-+|+++.++-..++.-..+|--..+..++.--|+++--+|+=+. -.|+|+.
T Consensus 494 E~ydp~~~~W~~v~~m~~~rs~~g~~~~~~~ly~vGG~~~~~~l~~ve~ydp~~ 547 (571)
T KOG4441|consen 494 ERYDPETNQWTMVAPMTSPRSAVGVVVLGGKLYAVGGFDGNNNLNTVECYDPET 547 (571)
T ss_pred EEEcCCCCceeEcccCccccccccEEEECCEEEEEecccCccccceeEEcCCCC
Confidence 67999999999999889999888888888886665555554433 3345543
No 124
>KOG1587|consensus
Probab=58.99 E-value=4.8e+02 Score=33.23 Aligned_cols=79 Identities=19% Similarity=0.255 Sum_probs=47.2
Q ss_pred ccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcce--EEe-ecCCCCCCcccEEEEe-eC--CeeE
Q psy7977 344 ALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEE--VCK-EPLGGEIIPRSILMTC-FE--GHCY 417 (1225)
Q Consensus 344 ~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~--v~~-~~L~~~~~P~SIll~~-l~--~~~~ 417 (1225)
.-..+|.|+++++. ..+.++.|+. +|.|.+|.+..... .+. ..+. ...+..+..+. .. ...-
T Consensus 240 ~~~s~v~~~~f~p~----------~p~ll~gG~y-~GqV~lWD~~~~~~~~~s~ls~~~-~sh~~~v~~vvW~~~~~~~~ 307 (555)
T KOG1587|consen 240 ESPSEVTCLKFCPF----------DPNLLAGGCY-NGQVVLWDLRKGSDTPPSGLSALE-VSHSEPVTAVVWLQNEHNTE 307 (555)
T ss_pred ecCCceeEEEeccC----------CcceEEeecc-CceEEEEEccCCCCCCCccccccc-ccCCcCeEEEEEeccCCCCc
Confidence 34578999999885 3567888888 99999999964322 221 1110 11222222111 11 1233
Q ss_pred EEEEECCCcEEEEEEcC
Q psy7977 418 LLVALGDGSMFYFSLDP 434 (1225)
Q Consensus 418 LlVGl~nG~L~~y~ld~ 434 (1225)
++.+..||.+..+.++.
T Consensus 308 f~s~ssDG~i~~W~~~~ 324 (555)
T KOG1587|consen 308 FFSLSSDGSICSWDTDM 324 (555)
T ss_pred eEEEecCCcEeeeeccc
Confidence 66666799999997653
No 125
>KOG0282|consensus
Probab=58.87 E-value=1.8e+02 Score=35.62 Aligned_cols=233 Identities=12% Similarity=0.076 Sum_probs=115.4
Q ss_pred ceeeeecCCCCCcEEEEEecC--CEEEEE--ECCeEEEEEeecc-ceeEEeeeccCceeEEEEeccCCCCCCCCccccCc
Q psy7977 296 ARVSSWEPPNGKSISVVSCNK--NQVLCA--TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQ 370 (1225)
Q Consensus 296 ~~i~eW~~p~g~~Iv~As~n~--~~VlVa--sgg~Lv~feid~~-~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~ 370 (1225)
+.+..|.. ..+.|+++-... ..++++ .++.|.+.++-.+ .+...- .--...|..+..+. ....
T Consensus 205 k~~~~~~g-H~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf-~gH~k~Vrd~~~s~----------~g~~ 272 (503)
T KOG0282|consen 205 KLSHNLSG-HTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTF-KGHRKPVRDASFNN----------CGTS 272 (503)
T ss_pred hheeeccC-CccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhh-hcchhhhhhhhccc----------cCCe
Confidence 45666753 223355554443 456665 4677777776532 221100 00011222222221 2345
Q ss_pred EEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCccccceeeeecC-
Q psy7977 371 LAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGT- 449 (1225)
Q Consensus 371 ~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~LG~- 449 (1225)
|+-.++ |+.+++|...+-..+..-.+ +.+|-.+.+..- +...+++|+.||.+..+.+- +|++...--+.||.
T Consensus 273 fLS~sf--D~~lKlwDtETG~~~~~f~~--~~~~~cvkf~pd-~~n~fl~G~sd~ki~~wDiR--s~kvvqeYd~hLg~i 345 (503)
T KOG0282|consen 273 FLSASF--DRFLKLWDTETGQVLSRFHL--DKVPTCVKFHPD-NQNIFLVGGSDKKIRQWDIR--SGKVVQEYDRHLGAI 345 (503)
T ss_pred eeeeec--ceeeeeeccccceEEEEEec--CCCceeeecCCC-CCcEEEEecCCCcEEEEecc--chHHHHHHHhhhhhe
Confidence 666665 89999999976555444444 355544433321 24668999999999988764 35443333334442
Q ss_pred ccceEEEEeeCCceEEEEecC-CcEEEEEcCCeeEEeecccccccccccCCCCCCC-CeEEEE--eCCeEEEEEEcCCCC
Q psy7977 450 QPTVLKTFRSLSTTNVFACSD-RPTVIYSSNHKLVFSNVNLRQVNHMCSLNAESYP-DSLALA--TDSTFTFGTIDEIQK 525 (1225)
Q Consensus 450 ~pV~L~~~~~~g~~~Vfa~sd-rP~liyss~g~l~~~pl~~~~v~~~s~F~se~~p-~glv~v--s~~~LrI~~i~~~~~ 525 (1225)
--+.|++ .|..- +.++| ...+|+. .+...-.....+.-.+-+|+.+- .| +.++++ -+|.+.|+.+...-+
T Consensus 346 ~~i~F~~---~g~rF-issSDdks~riWe-~~~~v~ik~i~~~~~hsmP~~~~-~P~~~~~~aQs~dN~i~ifs~~~~~r 419 (503)
T KOG0282|consen 346 LDITFVD---EGRRF-ISSSDDKSVRIWE-NRIPVPIKNIADPEMHTMPCLTL-HPNGKWFAAQSMDNYIAIFSTVPPFR 419 (503)
T ss_pred eeeEEcc---CCceE-eeeccCccEEEEE-cCCCccchhhcchhhccCcceec-CCCCCeehhhccCceEEEEecccccc
Confidence 1222322 22222 22233 3233333 22221111112222233444321 12 233333 357777777766555
Q ss_pred eeeEEEe----CCCcccEEEEecCCCEEEEEE
Q psy7977 526 LHIRTVP----LGEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 526 l~ir~Ip----Lg~TprrIay~p~s~~~vV~t 553 (1225)
++-+++- ..+-+.++.++|..++++-+-
T Consensus 420 ~nkkK~feGh~vaGys~~v~fSpDG~~l~SGd 451 (503)
T KOG0282|consen 420 LNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGD 451 (503)
T ss_pred cCHhhhhcceeccCceeeEEEcCCCCeEEeec
Confidence 5555543 345678899999999877664
No 126
>KOG3881|consensus
Probab=58.67 E-value=4e+02 Score=32.12 Aligned_cols=203 Identities=15% Similarity=0.163 Sum_probs=111.1
Q ss_pred cCCeEEEEeecCCeEEEEEeeCCCCCCCceEEEeeeeccccceeeEEeeccccCCccEEEEEecCCCccEEEEeecceee
Q psy7977 129 DNGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNLAPIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNGIGIE 208 (1225)
Q Consensus 129 ~~g~LFvGS~~GDS~L~~i~~~~ddd~~~l~v~d~l~NlgPI~D~~v~d~~~~~~~qLva~sG~g~~GsLrilR~GI~~~ 208 (1225)
.+|.|..+-..|+=++......+ -.++-+. .+...+++.+|.-.+ ..+.|+|.-|.-+ +.
T Consensus 114 ~dg~Litc~~sG~l~~~~~k~~d-~hss~l~---~la~g~g~~~~r~~~----~~p~Iva~GGke~------------~n 173 (412)
T KOG3881|consen 114 ADGTLITCVSSGNLQVRHDKSGD-LHSSKLI---KLATGPGLYDVRQTD----TDPYIVATGGKEN------------IN 173 (412)
T ss_pred cCCEEEEEecCCcEEEEeccCCc-cccccce---eeecCCceeeeccCC----CCCceEecCchhc------------cc
Confidence 46777777777766665554321 0011233 333335555543322 3567777766554 23
Q ss_pred EEEEeeCCCcceEeEeeeCCCCCCccEEEEEcCCceEEEEEcCceeeeeccCCcccccCeEEEEeeCCCeEEEEcc-CcE
Q psy7977 209 EHACIDLPGIKGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVTP-SAA 287 (1225)
Q Consensus 209 ~~~s~eLpgv~~iWtl~~~~~~~~d~yLVlSf~~~T~Vl~i~ge~veEv~~sgF~~~~~TL~ag~l~~~~iVQVT~-~~I 287 (1225)
++..-++.+.+++|+-|--.+ ++|=+ +++|+- ++-.|....+ ...++-+|. ..+
T Consensus 174 ~lkiwdle~~~qiw~aKNvpn----D~L~L----rVPvW~---------tdi~Fl~g~~--------~~~fat~T~~hqv 228 (412)
T KOG3881|consen 174 ELKIWDLEQSKQIWSAKNVPN----DRLGL----RVPVWI---------TDIRFLEGSP--------NYKFATITRYHQV 228 (412)
T ss_pred ceeeeecccceeeeeccCCCC----ccccc----eeeeee---------ccceecCCCC--------CceEEEEecceeE
Confidence 333346777799998764321 22111 222321 2223333211 223444443 458
Q ss_pred EEEecCCc-ceeeeecCCCCCcEEEEEe--cCCEEEEE-ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCC
Q psy7977 288 ILISTESK-ARVSSWEPPNGKSISVVSC--NKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETS 363 (1225)
Q Consensus 288 Rli~~~~~-~~i~eW~~p~g~~Iv~As~--n~~~VlVa-sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~ 363 (1225)
|+||...+ +.+..++.. +..|++-+- .+++|+++ .-++|..|.+..+.+--..-..+...|+.|+.-+
T Consensus 229 R~YDt~~qRRPV~~fd~~-E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp------- 300 (412)
T KOG3881|consen 229 RLYDTRHQRRPVAQFDFL-ENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHP------- 300 (412)
T ss_pred EEecCcccCcceeEeccc-cCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcC-------
Confidence 99987642 345555432 234555444 35677777 6788888877655444333455677788887754
Q ss_pred CccccCcEEEEEEecCCeEEEEeCCC
Q psy7977 364 SEPAKAQLAAVGLWTDISARLLSLPS 389 (1225)
Q Consensus 364 ~~~~~s~~laVG~w~d~tv~IlsL~~ 389 (1225)
..+++|-+.- |.-|||+.+.+
T Consensus 301 ----~~~~las~GL-DRyvRIhD~kt 321 (412)
T KOG3881|consen 301 ----THPVLASCGL-DRYVRIHDIKT 321 (412)
T ss_pred ----CCceEEeecc-ceeEEEeeccc
Confidence 2357777766 99999999976
No 127
>KOG0271|consensus
Probab=57.69 E-value=1.5e+02 Score=35.39 Aligned_cols=78 Identities=15% Similarity=0.050 Sum_probs=51.3
Q ss_pred CceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCC
Q psy7977 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDG 425 (1225)
Q Consensus 346 ~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG 425 (1225)
.++|+||+..|.--. .....+|-+. .||+++|+++..-..+. .+. .--.++..+..|+..+++-|..|+
T Consensus 200 ~K~It~Lawep~hl~------p~~r~las~s-kDg~vrIWd~~~~~~~~--~ls--gHT~~VTCvrwGG~gliySgS~Dr 268 (480)
T KOG0271|consen 200 KKWITALAWEPLHLV------PPCRRLASSS-KDGSVRIWDTKLGTCVR--TLS--GHTASVTCVRWGGEGLIYSGSQDR 268 (480)
T ss_pred ccceeEEeecccccC------CCccceeccc-CCCCEEEEEccCceEEE--Eec--cCccceEEEEEcCCceEEecCCCc
Confidence 478999999875221 1244555555 59999999985321111 121 111245567788888999999999
Q ss_pred cEEEEEEcC
Q psy7977 426 SMFYFSLDP 434 (1225)
Q Consensus 426 ~L~~y~ld~ 434 (1225)
.+-.|+...
T Consensus 269 tIkvw~a~d 277 (480)
T KOG0271|consen 269 TIKVWRALD 277 (480)
T ss_pred eEEEEEccc
Confidence 999998653
No 128
>KOG0772|consensus
Probab=57.30 E-value=3.8e+02 Score=33.44 Aligned_cols=133 Identities=17% Similarity=0.322 Sum_probs=67.3
Q ss_pred ceEEEEEEEeCC--cEEEEEEEEecC--ceeeeccc--cCeEEEE--eCCEEEEEEcCCCceee----eeecccc-eeEE
Q psy7977 1061 QGRIIIFHYDDG--KLQQIAEKEIKG--ACYSMCEF--NGKLLAS--INSTVRLFEWTNEKELR----LECSHFN-NIIA 1127 (1225)
Q Consensus 1061 ~GrI~vf~i~~~--kL~lv~~~ev~G--~v~al~~f--~G~LLa~--vg~~l~vy~l~~~~~L~----~e~~~~~-~~i~ 1127 (1225)
-|.+++|++.+- .++.+-.....| .+-..|.| .|+++|| ....|.+|+.+... .+ +.-.+.+ .- +
T Consensus 290 DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~-v~p~~~vk~AH~~g~~-I 367 (641)
T KOG0772|consen 290 DGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRT-VRPVMKVKDAHLPGQD-I 367 (641)
T ss_pred CCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcc-cccceEeeeccCCCCc-e
Confidence 478899999873 455554444433 34445888 4887765 66899999986422 11 1111111 11 1
Q ss_pred EEEE--EECCEEEEeeccccEEEEEEecCCCeEEEEeccCCCceeEEEEeeeCCcEEE-------EcCCCcEEEEEe
Q psy7977 1128 LFLK--VKGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLG-------AENSYNLFICQK 1195 (1225)
Q Consensus 1128 ~~l~--~~g~~IlvGD~~kSv~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~dt~l~-------aD~~gNl~vl~~ 1195 (1225)
++|. ..|++++----=.++-+.--+.-..-|...-.=.++.-.|.|+|=.++.+|. ++..|+|+++..
T Consensus 368 tsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~ 444 (641)
T KOG0772|consen 368 TSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDR 444 (641)
T ss_pred eEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEec
Confidence 3332 2233333221112222222222222333333334555567777777664443 466778887755
No 129
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=56.92 E-value=4.1e+02 Score=31.77 Aligned_cols=88 Identities=6% Similarity=0.106 Sum_probs=51.0
Q ss_pred cCcEEEEecCCcceeeeecCC--CCCcEEEEEecCCEEEEE-ECCeEEEEEeeccceeEEeeeccC-ceeEEEEeccCCC
Q psy7977 284 PSAAILISTESKARVSSWEPP--NGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALE-YEVACLDISPLSN 359 (1225)
Q Consensus 284 ~~~IRli~~~~~~~i~eW~~p--~g~~Iv~As~n~~~VlVa-sgg~Lv~feid~~~L~ev~~~~l~-~eIScLai~~~~~ 359 (1225)
...+..++..+++. .|..+ .+....+..+.+.+|++. .+|.|+.++.+++++.- +.++. ..+ ...|+
T Consensus 303 ~g~l~ald~~tG~~--~W~~~~~~~~~~~sp~v~~g~l~v~~~~G~l~~ld~~tG~~~~--~~~~~~~~~---~s~P~-- 373 (394)
T PRK11138 303 NDRVYALDTRGGVE--LWSQSDLLHRLLTAPVLYNGYLVVGDSEGYLHWINREDGRFVA--QQKVDSSGF---LSEPV-- 373 (394)
T ss_pred CCeEEEEECCCCcE--EEcccccCCCcccCCEEECCEEEEEeCCCEEEEEECCCCCEEE--EEEcCCCcc---eeCCE--
Confidence 34577777765433 56543 233344455678888887 67888888876664432 22221 111 11111
Q ss_pred CCCCCccccCcEEEEEEecCCeEEEEeCC
Q psy7977 360 EETSSEPAKAQLAAVGLWTDISARLLSLP 388 (1225)
Q Consensus 360 ~~~~~~~~~s~~laVG~w~d~tv~IlsL~ 388 (1225)
.....+.|+.. +|.|..+++|
T Consensus 374 -------~~~~~l~v~t~-~G~l~~~~~~ 394 (394)
T PRK11138 374 -------VADDKLLIQAR-DGTVYAITRP 394 (394)
T ss_pred -------EECCEEEEEeC-CceEEEEeCC
Confidence 12346888887 9999988875
No 130
>PHA02713 hypothetical protein; Provisional
Probab=55.90 E-value=4.3e+02 Score=33.56 Aligned_cols=182 Identities=13% Similarity=0.204 Sum_probs=90.2
Q ss_pred EEEEEECCC--CcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEec
Q psy7977 1006 NLLIIDQNT--FEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIK 1083 (1225)
Q Consensus 1006 ~irlvdp~t--~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev~ 1083 (1225)
++...||.+ |..+. .+...-...+ ++.++ +..+|+|-... .......++.|+...++...+...+..
T Consensus 273 ~v~~yd~~~~~W~~l~--~mp~~r~~~~--~a~l~---~~IYviGG~~~----~~~~~~~v~~Yd~~~n~W~~~~~m~~~ 341 (557)
T PHA02713 273 CILVYNINTMEYSVIS--TIPNHIINYA--SAIVD---NEIIIAGGYNF----NNPSLNKVYKINIENKIHVELPPMIKN 341 (557)
T ss_pred CEEEEeCCCCeEEECC--CCCccccceE--EEEEC---CEEEEEcCCCC----CCCccceEEEEECCCCeEeeCCCCcch
Confidence 456788876 44443 3332222223 23442 36777774210 111234566676655444333322221
Q ss_pred CceeeeccccCeEEEEe-------CCEEEEEEcCCCceeeeeecccceeEEEEEEEECCEEEE-eecc------------
Q psy7977 1084 GACYSMCEFNGKLLASI-------NSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILV-GDLM------------ 1143 (1225)
Q Consensus 1084 G~v~al~~f~G~LLa~v-------g~~l~vy~l~~~~~L~~e~~~~~~~i~~~l~~~g~~Ilv-GD~~------------ 1143 (1225)
-.=.+++.++|+|-|-= -+++..|+...++--.......+.. .....+.+++|+| |-..
T Consensus 342 R~~~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~-~~~~~~~~g~IYviGG~~~~~~~~~~~~~~ 420 (557)
T PHA02713 342 RCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALS-SYGMCVLDQYIYIIGGRTEHIDYTSVHHMN 420 (557)
T ss_pred hhceeEEEECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccc-cccEEEECCEEEEEeCCCcccccccccccc
Confidence 11123344455543211 1357888887664322111111111 1112245665555 4221
Q ss_pred ---------ccEEEEEEecCCCeEEEEeccCCCceeEEEEeeeCCcEEEEcCC--CcE--EEEEeCCCC
Q psy7977 1144 ---------RSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENS--YNL--FICQKDSAA 1199 (1225)
Q Consensus 1144 ---------kSv~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~dt~l~aD~~--gNl--~vl~~~~~~ 1199 (1225)
.+-++..|+++.++-..++.=..+|.-.++..+++.-|+.+-.. ..+ .+.+|+|+.
T Consensus 421 ~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~ 489 (557)
T PHA02713 421 SIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNT 489 (557)
T ss_pred cccccccccccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCC
Confidence 12357889999999998887666776667777777744444221 122 367999986
No 131
>KOG0293|consensus
Probab=55.52 E-value=1.3e+02 Score=36.30 Aligned_cols=151 Identities=16% Similarity=0.171 Sum_probs=84.9
Q ss_pred ceEeEeeeCCCCCCccEEEEEcCCce-EEEEEcCceeeeeccCCcccccCeEEEEeeCC-C--eEEEEccCcEEEEecCC
Q psy7977 219 KGIWALSIGSPKNLDNTLVLSFVGHT-RVLTLSGAEVEETEMGGFTSDQQTFYCGNVDP-R--TVLQVTPSAAILISTES 294 (1225)
Q Consensus 219 ~~iWtl~~~~~~~~d~yLVlSf~~~T-~Vl~i~ge~veEv~~sgF~~~~~TL~ag~l~~-~--~iVQVT~~~IRli~~~~ 294 (1225)
..+|-+.... -++|+++.+.+.- ++|.+ |...+-+....++-+.--.+.+ + .+|-+.++++++.|.+.
T Consensus 355 ~~v~dlait~---Dgk~vl~v~~d~~i~l~~~-----e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e 426 (519)
T KOG0293|consen 355 PKVHDLAITY---DGKYVLLVTVDKKIRLYNR-----EARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEE 426 (519)
T ss_pred ceeEEEEEcC---CCcEEEEEecccceeeech-----hhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecch
Confidence 4788887764 2567777765532 23322 2223334555556666666643 3 67778899999988764
Q ss_pred cceeeeecCC-CCC-cEEEEEecCCEEEEE---ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccC
Q psy7977 295 KARVSSWEPP-NGK-SISVVSCNKNQVLCA---TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKA 369 (1225)
Q Consensus 295 ~~~i~eW~~p-~g~-~Iv~As~n~~~VlVa---sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s 369 (1225)
.+++.....- .+. .|-+|....+.-.|+ .++.++...-..+++..+- .--...|.|++-.|.. .
T Consensus 427 ~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~L-sGHs~~vNcVswNP~~----------p 495 (519)
T KOG0293|consen 427 NKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVL-SGHSKTVNCVSWNPAD----------P 495 (519)
T ss_pred hhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEee-cCCcceeeEEecCCCC----------H
Confidence 3333222211 222 344444444555665 3567777766555543321 0112567788887641 2
Q ss_pred cEEEEEEecCCeEEEEeCCC
Q psy7977 370 QLAAVGLWTDISARLLSLPS 389 (1225)
Q Consensus 370 ~~laVG~w~d~tv~IlsL~~ 389 (1225)
..+|-+.. ||+|+||...+
T Consensus 496 ~m~ASasD-DgtIRIWg~~~ 514 (519)
T KOG0293|consen 496 EMFASASD-DGTIRIWGPSD 514 (519)
T ss_pred HHhhccCC-CCeEEEecCCc
Confidence 33455554 99999998864
No 132
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=54.52 E-value=71 Score=36.39 Aligned_cols=78 Identities=14% Similarity=0.224 Sum_probs=54.3
Q ss_pred CceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEe-eC-CeeEEEEEEC
Q psy7977 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTC-FE-GHCYLLVALG 423 (1225)
Q Consensus 346 ~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~-l~-~~~~LlVGl~ 423 (1225)
...|+||+.-..... +......+++|+. ++.|.|++-..+..+.+..++ ++|..|+..- +. ....++|..|
T Consensus 176 ~t~ITcm~tikk~~~----d~~a~scLViGTE-~~~i~iLd~~af~il~~~~lp--svPv~i~~~G~~devdyRI~Va~R 248 (257)
T PF14779_consen 176 QTVITCMATIKKSSA----DEDAVSCLVIGTE-SGEIYILDPQAFTILKQVQLP--SVPVFISVSGQYDEVDYRIVVACR 248 (257)
T ss_pred CceeEEeeeeccccc----CCCCcceEEEEec-CCeEEEECchhheeEEEEecC--CCceEEEEEeeeeccceEEEEEeC
Confidence 467889886432111 1134678999997 999999888778877777885 6776665542 22 3456999999
Q ss_pred CCcEEEE
Q psy7977 424 DGSMFYF 430 (1225)
Q Consensus 424 nG~L~~y 430 (1225)
||.++..
T Consensus 249 dg~iy~i 255 (257)
T PF14779_consen 249 DGKIYTI 255 (257)
T ss_pred CCEEEEE
Confidence 9998754
No 133
>KOG0271|consensus
Probab=53.73 E-value=58 Score=38.65 Aligned_cols=109 Identities=20% Similarity=0.275 Sum_probs=72.0
Q ss_pred CceeeeccccC---eEEEEeC-CEEEEEEcCCCceeeeeecccceeEEEEEE--EECCEEEEeeccccEEEEEEecCCCe
Q psy7977 1084 GACYSMCEFNG---KLLASIN-STVRLFEWTNEKELRLECSHFNNIIALFLK--VKGDFILVGDLMRSLTLLQYKTMEGS 1157 (1225)
Q Consensus 1084 G~v~al~~f~G---~LLa~vg-~~l~vy~l~~~~~L~~e~~~~~~~i~~~l~--~~g~~IlvGD~~kSv~~l~y~~~~~~ 1157 (1225)
++|.++ .|.+ +|+.|-| +++|+||+..+.-+.. |+..-+- +.++. ..|..|.-|-+--+|.+ |+++.++
T Consensus 116 e~Vl~~-~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t-~KgH~~W-VlcvawsPDgk~iASG~~dg~I~l--wdpktg~ 190 (480)
T KOG0271|consen 116 EAVLSV-QFSPTGSRLVTGSGDTTVRLWDLDTETPLFT-CKGHKNW-VLCVAWSPDGKKIASGSKDGSIRL--WDPKTGQ 190 (480)
T ss_pred CcEEEE-EecCCCceEEecCCCceEEeeccCCCCccee-ecCCccE-EEEEEECCCcchhhccccCCeEEE--ecCCCCC
Confidence 455553 3644 7777887 7999999976554431 2322232 34444 45667777766667766 7777766
Q ss_pred EEEEeccCCCceeEEEEeeeCC------cEEEEcCCCcEEEEEeCC
Q psy7977 1158 FEEISRDYNPNWMTSIEILDDE------LFLGAENSYNLFICQKDS 1197 (1225)
Q Consensus 1158 L~~~arD~~~~wvta~~~Ld~d------t~l~aD~~gNl~vl~~~~ 1197 (1225)
.+--+=--+..|+|+...=... .++.+-++|+++|-....
T Consensus 191 ~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~ 236 (480)
T KOG0271|consen 191 QIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKL 236 (480)
T ss_pred cccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccC
Confidence 6554445678899999775433 588999999999977654
No 134
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=53.42 E-value=97 Score=31.96 Aligned_cols=72 Identities=10% Similarity=0.149 Sum_probs=44.2
Q ss_pred EeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCC--eeE
Q psy7977 340 LAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEG--HCY 417 (1225)
Q Consensus 340 v~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~--~~~ 417 (1225)
+....+..+|+||+..++... ...+.|+||+ ..++..|....-..++-..++ + =.+++++-.+++ .+.
T Consensus 41 i~~LNin~~italaaG~l~~~------~~~D~LliGt--~t~llaYDV~~N~d~Fyke~~-D-Gvn~i~~g~~~~~~~~l 110 (136)
T PF14781_consen 41 ISFLNINQEITALAAGRLKPD------DGRDCLLIGT--QTSLLAYDVENNSDLFYKEVP-D-GVNAIVIGKLGDIPSPL 110 (136)
T ss_pred eeEEECCCceEEEEEEecCCC------CCcCEEEEec--cceEEEEEcccCchhhhhhCc-c-ceeEEEEEecCCCCCcE
Confidence 344567899999999887432 3578899997 578999999754333322222 1 113455555542 455
Q ss_pred EEEE
Q psy7977 418 LLVA 421 (1225)
Q Consensus 418 LlVG 421 (1225)
++||
T Consensus 111 ~ivG 114 (136)
T PF14781_consen 111 VIVG 114 (136)
T ss_pred EEEC
Confidence 5554
No 135
>KOG1524|consensus
Probab=52.90 E-value=5.6e+02 Score=32.14 Aligned_cols=284 Identities=15% Similarity=0.249 Sum_probs=141.6
Q ss_pred CCcc-EEEEEecCCCccEEEEeecceeeEEEEeeCCCc-ceEeEeeeCCCCCCccEEEEEcCCceEEEEEcCc-eeeee-
Q psy7977 182 GQGQ-LVTCSGGFKEGSLRIIRNGIGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLTLSGA-EVEET- 257 (1225)
Q Consensus 182 ~~~q-Lva~sG~g~~GsLrilR~GI~~~~~~s~eLpgv-~~iWtl~~~~~~~~d~yLVlSf~~~T~Vl~i~ge-~veEv- 257 (1225)
++.+ ++.|+ ++|.+.++.+.-.++...+..-..+ .+-|+- +.|-++.. || .+-.+
T Consensus 73 ~~~d~~~i~s---~DGkf~il~k~~rVE~sv~AH~~A~~~gRW~~-----------------dGtgLlt~-GEDG~iKiW 131 (737)
T KOG1524|consen 73 KGSDTLLICS---NDGRFVILNKSARVERSISAHAAAISSGRWSP-----------------DGAGLLTA-GEDGVIKIW 131 (737)
T ss_pred CCcceEEEEc---CCceEEEecccchhhhhhhhhhhhhhhcccCC-----------------CCceeeee-cCCceEEEE
Confidence 3444 44444 5788888888766655433332222 355631 23444443 32 22222
Q ss_pred ccCCc-----ccccCeEEEEeeCC--CeEEEEccCcEEEEecCCcceeeeecCCCCCcEEEEEecCCEEEEEECCeEEEE
Q psy7977 258 EMGGF-----TSDQQTFYCGNVDP--RTVLQVTPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCATGCDVYYL 330 (1225)
Q Consensus 258 ~~sgF-----~~~~~TL~ag~l~~--~~iVQVT~~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n~~~VlVasgg~Lv~f 330 (1225)
+-+|. .-++..++|...+. +.+|---...+.+-...-...+-.|++-+| -|.+++-|..-=+|+++|+=+.|
T Consensus 132 SrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~i~WkAHDG-iiL~~~W~~~s~lI~sgGED~kf 210 (737)
T KOG1524|consen 132 SRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHISIKPLAANSKIIRWRAHDG-LVLSLSWSTQSNIIASGGEDFRF 210 (737)
T ss_pred eccchHHHHHhhcCceeEEEEECCCCCceEEecCCeEEEeecccccceeEEeccCc-EEEEeecCccccceeecCCceeE
Confidence 33332 24556778887753 244433333333322221256788998776 47777777766677788887778
Q ss_pred Eeecc-ceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEE
Q psy7977 331 EVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILM 409 (1225)
Q Consensus 331 eid~~-~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll 409 (1225)
.+=++ +-....+..-++.|++++..| ....+||.. +++| |..... -||.-
T Consensus 211 KvWD~~G~~Lf~S~~~ey~ITSva~np------------d~~~~v~S~--nt~R---~~~p~~------------GSifn 261 (737)
T KOG1524|consen 211 KIWDAQGANLFTSAAEEYAITSVAFNP------------EKDYLLWSY--NTAR---FSSPRV------------GSIFN 261 (737)
T ss_pred EeecccCcccccCChhccceeeeeecc------------ccceeeeee--eeee---ecCCCc------------cceEE
Confidence 77432 222333444467788888865 234566654 4555 211111 12211
Q ss_pred Eee-CCeeEEEEEECCCcEEEE-EEcCC----CCccccceeeeec-------C-----ccceEEEEeeCCce-EEEEecC
Q psy7977 410 TCF-EGHCYLLVALGDGSMFYF-SLDPA----SGRLTDKKKVTLG-------T-----QPTVLKTFRSLSTT-NVFACSD 470 (1225)
Q Consensus 410 ~~l-~~~~~LlVGl~nG~L~~y-~ld~~----sg~Ls~~k~~~LG-------~-----~pV~L~~~~~~g~~-~Vfa~sd 470 (1225)
... .++..+-+|+.+|.|+.- .++.. +++.+..+.+.+- . .|-+...+.. ++. -|.++|.
T Consensus 262 lsWS~DGTQ~a~gt~~G~v~~A~~ieq~l~~~n~~~t~~~r~~I~vrdV~~~v~d~LE~p~rv~k~sL-~Y~hLvvaTs~ 340 (737)
T KOG1524|consen 262 LSWSADGTQATCGTSTGQLIVAYAIEQQLVSGNLKATSKSRKSITVRDVATGVQDILEFPQRVVKFSL-GYGHLVVATSL 340 (737)
T ss_pred EEEcCCCceeeccccCceEEEeeeehhhhhhccceeEeeccceEEeehhhhhHHHHhhCccceeeeee-ceeEEEEEecc
Confidence 111 145668899999998874 44421 1222221111111 1 1222222222 333 3444444
Q ss_pred CcEEEEEcCC--eeEEeecccccccccccCCCCCCCCeEEEEeCCeEEEEEEcCC
Q psy7977 471 RPTVIYSSNH--KLVFSNVNLRQVNHMCSLNAESYPDSLALATDSTFTFGTIDEI 523 (1225)
Q Consensus 471 rP~liyss~g--~l~~~pl~~~~v~~~s~F~se~~p~glv~vs~~~LrI~~i~~~ 523 (1225)
.-+ +|+.++ .+.+...+.... =-.+++.+.|.+.++.++.+.+-+..
T Consensus 341 qvy-iys~knwntpiiidgre~tr-----~lieq~ek~fli~dgsSi~lytyegR 389 (737)
T KOG1524|consen 341 QVY-IYSEKNWNTPIIIDGREDTR-----NLIEQGEKYFLILDGSSIWLYTYEGR 389 (737)
T ss_pred EEE-EEecCCccCcEEEeccccch-----hHhhhhhhheEEecCcEEEEEEecCc
Confidence 444 344332 122221111100 01256778888888888888887653
No 136
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=51.04 E-value=6.2e+02 Score=32.05 Aligned_cols=158 Identities=15% Similarity=0.212 Sum_probs=98.4
Q ss_pred eeEEEEEEECC--CCcEEEEEECCCCCceEEEEEEEecC-CCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEE
Q psy7977 1003 EVHNLLIIDQN--TFEILHAHQLFPGEYALSLISSKFGE-DPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAE 1079 (1225)
Q Consensus 1003 ~~s~irlvdp~--t~~~i~~~eL~~nE~~~si~~v~~~~-~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~ 1079 (1225)
++..+.|+.-. ..|.+..++-|-+. ..+.|.. .+...+.|.-..-..+ ...-...+|++..+|++-+..
T Consensus 182 draNl~L~~~~~~klEvL~yirTE~dP-----l~~~Fs~~~~~qi~tVE~s~s~~g---~~~~d~ciYE~~r~klqrvsv 253 (545)
T PF11768_consen 182 DRANLHLLSCSGGKLEVLSYIRTENDP-----LDVEFSLNQPYQIHTVEQSISVKG---EPSADSCIYECSRNKLQRVSV 253 (545)
T ss_pred hhccEEEEEecCCcEEEEEEEEecCCc-----EEEEccCCCCcEEEEEEEecCCCC---CceeEEEEEEeecCceeEEEE
Confidence 34456665533 46777776666554 1245543 4667888887763332 145566789999888887776
Q ss_pred EEe--cCceeeec--cccCeEEEE-eCCEEEEEEcCCCceeeeeecccceeEEEEEEEECCEEEEeeccccEEEEEEecC
Q psy7977 1080 KEI--KGACYSMC--EFNGKLLAS-INSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTM 1154 (1225)
Q Consensus 1080 ~ev--~G~v~al~--~f~G~LLa~-vg~~l~vy~l~~~~~L~~e~~~~~~~i~~~l~~~g~~IlvGD~~kSv~~l~y~~~ 1154 (1225)
+.+ +..|.+.+ +-+.+|++| +...|++|+...+-.........|+. +.-+..|..++||.-+==++.+----.
T Consensus 254 tsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~ka~~~P~~--iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 254 TSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLAKAEFIPTL--IAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred EEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeeeeecccceE--EEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 655 55555533 224677766 77999999997654433222222222 333356778889887776666544445
Q ss_pred CCeEEEEeccCCCcee
Q psy7977 1155 EGSFEEISRDYNPNWM 1170 (1225)
Q Consensus 1155 ~~~L~~~arD~~~~wv 1170 (1225)
+=++..++.|..|.-+
T Consensus 332 pi~~qLlsEd~~P~~~ 347 (545)
T PF11768_consen 332 PIKMQLLSEDATPKST 347 (545)
T ss_pred ccceeeccccCCCccE
Confidence 6678888888877765
No 137
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=50.42 E-value=3.6e+02 Score=32.13 Aligned_cols=87 Identities=17% Similarity=0.241 Sum_probs=48.2
Q ss_pred eeecCCCCCcEEEEEecCCEEEEE--E---------CCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccc
Q psy7977 299 SSWEPPNGKSISVVSCNKNQVLCA--T---------GCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPA 367 (1225)
Q Consensus 299 ~eW~~p~g~~Iv~As~n~~~VlVa--s---------gg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~ 367 (1225)
..|+| .|-.+.+..-..+.+.|. . +.+|..|.+... +.+.+.+++.++.+|+++.-
T Consensus 233 ~~WrP-GG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~--krv~Ri~l~~~~~Si~Vsqd---------- 299 (342)
T PF06433_consen 233 DGWRP-GGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTH--KRVARIPLEHPIDSIAVSQD---------- 299 (342)
T ss_dssp TTEEE--SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTT--EEEEEEEEEEEESEEEEESS----------
T ss_pred cCcCC-cceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCC--eEEEEEeCCCccceEEEccC----------
Confidence 47885 555566665555555443 2 136766665533 44566777778888888652
Q ss_pred cCcEEEEEEecCCeEEEEeCCCcceEEe-ecC
Q psy7977 368 KAQLAAVGLWTDISARLLSLPSLEEVCK-EPL 398 (1225)
Q Consensus 368 ~s~~laVG~w~d~tv~IlsL~~Le~v~~-~~L 398 (1225)
....|......++.+.||...+-+.+.+ ..+
T Consensus 300 ~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~l 331 (342)
T PF06433_consen 300 DKPLLYALSAGDGTLDVYDAATGKLVRSIEQL 331 (342)
T ss_dssp SS-EEEEEETTTTEEEEEETTT--EEEEE---
T ss_pred CCcEEEEEcCCCCeEEEEeCcCCcEEeehhcc
Confidence 1233333333478999999987766654 344
No 138
>KOG0268|consensus
Probab=50.02 E-value=53 Score=38.79 Aligned_cols=177 Identities=18% Similarity=0.205 Sum_probs=89.3
Q ss_pred ceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEe-ecCCCCCCcccEEEEeeCCeeEEEEEECCC
Q psy7977 347 YEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCK-EPLGGEIIPRSILMTCFEGHCYLLVALGDG 425 (1225)
Q Consensus 347 ~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~-~~L~~~~~P~SIll~~l~~~~~LlVGl~nG 425 (1225)
+-|+||+-.|- .-..+|-|.. ||.|+||+|...+.... ++= ..+.+-|++.+ ..++.||- |-
T Consensus 67 dGV~~lakhp~----------~ls~~aSGs~-DG~VkiWnlsqR~~~~~f~AH--~G~V~Gi~v~~---~~~~tvgd-DK 129 (433)
T KOG0268|consen 67 DGVSCLAKHPN----------KLSTVASGSC-DGEVKIWNLSQRECIRTFKAH--EGLVRGICVTQ---TSFFTVGD-DK 129 (433)
T ss_pred cccchhhcCcc----------hhhhhhcccc-CceEEEEehhhhhhhheeecc--cCceeeEEecc---cceEEecC-Cc
Confidence 45677776442 2234667776 99999999976433221 111 12334555543 34445542 22
Q ss_pred cEEEEEEcCCCCccccceeeeecCccceEEEEeeCCceEEEEecCCcEEEEEc--CCeeEEeecccccccccccCCCCCC
Q psy7977 426 SMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLRQVNHMCSLNAESY 503 (1225)
Q Consensus 426 ~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~~g~~~Vfa~sdrP~liyss--~g~l~~~pl~~~~v~~~s~F~se~~ 503 (1225)
.+-++.++.. ....++|...+ ..+...-..++||+|..-.=|+.. ...++-....++.+ ..+.|+ ..
T Consensus 130 tvK~wk~~~~------p~~tilg~s~~--~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti-~svkfN--pv 198 (433)
T KOG0268|consen 130 TVKQWKIDGP------PLHTILGKSVY--LGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSI-SSVKFN--PV 198 (433)
T ss_pred ceeeeeccCC------cceeeeccccc--cccccccccccccccCceeeecccccCCccceeecCCCce-eEEecC--CC
Confidence 3444454421 11122332211 111122346789887655433321 22222222233322 222232 22
Q ss_pred CCeEEEEe--CCeEEEEEEcCCCCeeeEEEeCCCcccEEEEecCCCEEEEEE
Q psy7977 504 PDSLALAT--DSTFTFGTIDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 504 p~glv~vs--~~~LrI~~i~~~~~l~ir~IpLg~TprrIay~p~s~~~vV~t 553 (1225)
..+++... ++++.+. |.-+.-+.+++-++.-+.+|++.|+.-.|+++-
T Consensus 199 ETsILas~~sDrsIvLy--D~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ 248 (433)
T KOG0268|consen 199 ETSILASCASDRSIVLY--DLRQASPLKKVILTMRTNTICWNPEAFNFVAAN 248 (433)
T ss_pred cchheeeeccCCceEEE--ecccCCccceeeeeccccceecCccccceeecc
Confidence 34555544 3455544 444667889999999999999999666666664
No 139
>KOG0295|consensus
Probab=49.97 E-value=4.4e+02 Score=31.50 Aligned_cols=84 Identities=18% Similarity=0.218 Sum_probs=53.4
Q ss_pred CceeEEEEeccCCCCCCCC----ccccCcEEEEEEecCCeEEEEeCCCcceEEee-cCCCCCCcccEEEEeeCCeeEEEE
Q psy7977 346 EYEVACLDISPLSNEETSS----EPAKAQLAAVGLWTDISARLLSLPSLEEVCKE-PLGGEIIPRSILMTCFEGHCYLLV 420 (1225)
Q Consensus 346 ~~eIScLai~~~~~~~~~~----~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~-~L~~~~~P~SIll~~l~~~~~LlV 420 (1225)
+..|-|++..+...-.... .....+++..|.| |++|++++++.-..+.+- +.+ .=.+++++.. ++-||+-
T Consensus 277 Eh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~Sr-DktIk~wdv~tg~cL~tL~ghd--nwVr~~af~p--~Gkyi~S 351 (406)
T KOG0295|consen 277 EHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSR-DKTIKIWDVSTGMCLFTLVGHD--NWVRGVAFSP--GGKYILS 351 (406)
T ss_pred ccceEEEEecccccCcchhhccCCCCCccEEEeecc-cceEEEEeccCCeEEEEEeccc--ceeeeeEEcC--CCeEEEE
Confidence 4556687776542111001 1124589999999 999999999864333321 221 2234565543 5679999
Q ss_pred EECCCcEEEEEEcC
Q psy7977 421 ALGDGSMFYFSLDP 434 (1225)
Q Consensus 421 Gl~nG~L~~y~ld~ 434 (1225)
-..|+.|-.|.+..
T Consensus 352 caDDktlrvwdl~~ 365 (406)
T KOG0295|consen 352 CADDKTLRVWDLKN 365 (406)
T ss_pred EecCCcEEEEEecc
Confidence 99999999998864
No 140
>KOG0274|consensus
Probab=49.02 E-value=5.3e+02 Score=32.73 Aligned_cols=171 Identities=13% Similarity=0.186 Sum_probs=101.8
Q ss_pred EEEEEECCCCcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEE-ecC
Q psy7977 1006 NLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKE-IKG 1084 (1225)
Q Consensus 1006 ~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~e-v~G 1084 (1225)
.|++-+-.+...++.+.= +..++.++.+. .++++.|+. .|.|.||++. ..+++++-. -.|
T Consensus 312 tVkVW~v~n~~~l~l~~~----h~~~V~~v~~~---~~~lvsgs~----------d~~v~VW~~~--~~~cl~sl~gH~~ 372 (537)
T KOG0274|consen 312 TVKVWDVTNGACLNLLRG----HTGPVNCVQLD---EPLLVSGSY----------DGTVKVWDPR--TGKCLKSLSGHTG 372 (537)
T ss_pred eEEEEeccCcceEEEecc----ccccEEEEEec---CCEEEEEec----------CceEEEEEhh--hceeeeeecCCcc
Confidence 577777666666665432 34444445553 578888873 4689999997 455555432 468
Q ss_pred ceeeecccc-CeEEEE-eCCEEEEEEcCCC-ceeeeeecccceeEEEEEEEECCEEEEeeccccEEEEEEecCCCeEEEE
Q psy7977 1085 ACYSMCEFN-GKLLAS-INSTVRLFEWTNE-KELRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEGSFEEI 1161 (1225)
Q Consensus 1085 ~v~al~~f~-G~LLa~-vg~~l~vy~l~~~-~~L~~e~~~~~~~i~~~l~~~g~~IlvGD~~kSv~~l~y~~~~~~L~~~ 1161 (1225)
.|+++.-=+ .+++-| +-.++++|++... +.+.. ....... +..+...+++ +++..+.+ .+-.|+.+++.....
T Consensus 373 ~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~t-l~~h~~~-v~~l~~~~~~-Lvs~~aD~-~Ik~WD~~~~~~~~~ 448 (537)
T KOG0274|consen 373 RVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHT-LQGHTSL-VSSLLLRDNF-LVSSSADG-TIKLWDAEEGECLRT 448 (537)
T ss_pred eEEEEEecCcceEEeeeeccceEeecCCchhhhhhh-hcCCccc-ccccccccce-eEeccccc-cEEEeecccCceeee
Confidence 899984223 466655 6677999999877 43220 0111122 2344444454 45555555 233356666655555
Q ss_pred eccCCCceeEEEEeeeCCcEEEEcCCCcEEEEEeCCCCC
Q psy7977 1162 SRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAAT 1200 (1225)
Q Consensus 1162 arD~~~~wvta~~~Ld~dt~l~aD~~gNl~vl~~~~~~~ 1200 (1225)
..-.+.--+++...- .+.++++=.+|.+.+..++....
T Consensus 449 ~~~~~~~~v~~l~~~-~~~il~s~~~~~~~l~dl~~~~~ 486 (537)
T KOG0274|consen 449 LEGRHVGGVSALALG-KEEILCSSDDGSVKLWDLRSGTL 486 (537)
T ss_pred eccCCcccEEEeecC-cceEEEEecCCeeEEEecccCch
Confidence 544433445555554 56788888889988887766543
No 141
>KOG2111|consensus
Probab=48.78 E-value=5.1e+02 Score=30.49 Aligned_cols=174 Identities=13% Similarity=0.203 Sum_probs=107.4
Q ss_pred EEEEEEECCCCcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEecC
Q psy7977 1005 HNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKG 1084 (1225)
Q Consensus 1005 s~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev~G 1084 (1225)
..+-+-|......+-.++|. - .+..+.|. +..+||=. ..+|+||.+.+ .++++|..|+.-
T Consensus 75 NkviIWDD~k~~~i~el~f~--~---~I~~V~l~---r~riVvvl-----------~~~I~VytF~~-n~k~l~~~et~~ 134 (346)
T KOG2111|consen 75 NKVIIWDDLKERCIIELSFN--S---EIKAVKLR---RDRIVVVL-----------ENKIYVYTFPD-NPKLLHVIETRS 134 (346)
T ss_pred ceEEEEecccCcEEEEEEec--c---ceeeEEEc---CCeEEEEe-----------cCeEEEEEcCC-Chhheeeeeccc
Confidence 56778886666666555553 2 23334452 34555543 45899999976 577888777755
Q ss_pred ceeeeccc---cC-eEEEEeCC---EEEEEEcCCCce---eeeeecccceeEEEEEEEECCEEEEeeccccEEEEEEecC
Q psy7977 1085 ACYSMCEF---NG-KLLASINS---TVRLFEWTNEKE---LRLECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTM 1154 (1225)
Q Consensus 1085 ~v~al~~f---~G-~LLa~vg~---~l~vy~l~~~~~---L~~e~~~~~~~i~~~l~~~g~~IlvGD~~kSv~~l~y~~~ 1154 (1225)
-|-.||.+ .+ .+||-=|. .|+|-+|...+. ... ..+-..+-.+.|.-+|.+ ++.-..|+--.=-|+.+
T Consensus 135 NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I-~AH~s~Iacv~Ln~~Gt~-vATaStkGTLIRIFdt~ 212 (346)
T KOG2111|consen 135 NPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSII-NAHDSDIACVALNLQGTL-VATASTKGTLIRIFDTE 212 (346)
T ss_pred CCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEE-EcccCceeEEEEcCCccE-EEEeccCcEEEEEEEcC
Confidence 44444444 44 56776553 578888875543 110 111111112333334443 44445566655667765
Q ss_pred -CCeEEEEeccCCCceeEEEEeeeCCc-EEEEcCCCcEEEEEeCCCCC
Q psy7977 1155 -EGSFEEISRDYNPNWMTSIEILDDEL-FLGAENSYNLFICQKDSAAT 1200 (1225)
Q Consensus 1155 -~~~L~~~arD~~~~wvta~~~Ld~dt-~l~aD~~gNl~vl~~~~~~~ 1200 (1225)
...+.|+=|-+.+..+.++.|=.+.. ++++-+.|.|||++.-....
T Consensus 213 ~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~~ 260 (346)
T KOG2111|consen 213 DGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTEN 260 (346)
T ss_pred CCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecCCC
Confidence 45788999999999999999987765 66777889999999866443
No 142
>KOG1240|consensus
Probab=48.49 E-value=9.3e+02 Score=33.39 Aligned_cols=112 Identities=11% Similarity=0.092 Sum_probs=64.7
Q ss_pred EEEEEecCCEEEEE-ECCeEEEEEeecc---c-eeEEe-eecc--C-ceeEEEEeccCCCCCCCCccccCcEEEEEEecC
Q psy7977 309 ISVVSCNKNQVLCA-TGCDVYYLEVHGS---E-IKQLA-HRAL--E-YEVACLDISPLSNEETSSEPAKAQLAAVGLWTD 379 (1225)
Q Consensus 309 Iv~As~n~~~VlVa-sgg~Lv~feid~~---~-L~ev~-~~~l--~-~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d 379 (1225)
.+...-++.|++++ .+|.+..+.+|.. . ..++. ...+ + .-++|.+.... ..+..++.++- -
T Consensus 1103 ~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~---------~~S~~lvy~T~-~ 1172 (1431)
T KOG1240|consen 1103 KVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAI---------VQSHVLVYATD-L 1172 (1431)
T ss_pred EEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeeccccc---------ccceeEEEEEe-c
Confidence 34455568899998 7999999998852 1 11112 2222 2 22233332211 23556666664 6
Q ss_pred CeEEEEeCCCcceEEee--cCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEc
Q psy7977 380 ISARLLSLPSLEEVCKE--PLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLD 433 (1225)
Q Consensus 380 ~tv~IlsL~~Le~v~~~--~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld 433 (1225)
+.+..|........+.. .+. .....|+++-. ...+|++|+..|.++.|.+-
T Consensus 1173 ~~iv~~D~r~~~~~w~lk~~~~-hG~vTSi~idp--~~~WlviGts~G~l~lWDLR 1225 (1431)
T KOG1240|consen 1173 SRIVSWDTRMRHDAWRLKNQLR-HGLVTSIVIDP--WCNWLVIGTSRGQLVLWDLR 1225 (1431)
T ss_pred cceEEecchhhhhHHhhhcCcc-ccceeEEEecC--CceEEEEecCCceEEEEEee
Confidence 77888777543333321 121 22345666553 34699999999999998754
No 143
>KOG0319|consensus
Probab=47.50 E-value=7.7e+02 Score=32.12 Aligned_cols=169 Identities=16% Similarity=0.161 Sum_probs=89.4
Q ss_pred CceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEe-ecCCCCCCcccEEEEeeCCeeEEEEEECC
Q psy7977 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCK-EPLGGEIIPRSILMTCFEGHCYLLVALGD 424 (1225)
Q Consensus 346 ~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~-~~L~~~~~P~SIll~~l~~~~~LlVGl~n 424 (1225)
+.+++|+++.+. ...++.+.. .+-+++|+||..+.+-. .... .-| ++.++--+...-|--|=.|
T Consensus 62 ~d~ita~~l~~d-----------~~~L~~a~r-s~llrv~~L~tgk~irswKa~H--e~P-vi~ma~~~~g~LlAtggaD 126 (775)
T KOG0319|consen 62 EDEITALALTPD-----------EEVLVTASR-SQLLRVWSLPTGKLIRSWKAIH--EAP-VITMAFDPTGTLLATGGAD 126 (775)
T ss_pred hhhhheeeecCC-----------ccEEEEeec-cceEEEEEcccchHhHhHhhcc--CCC-eEEEEEcCCCceEEecccc
Confidence 467889999762 345666665 89999999997533211 1110 122 4444433344556677788
Q ss_pred CcEEEEEEcCCCCccccceeeeecCccceEEEEee-CCceEEEEecCCc--EEEEE--cCCeeEEeecccccc------c
Q psy7977 425 GSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRS-LSTTNVFACSDRP--TVIYS--SNHKLVFSNVNLRQV------N 493 (1225)
Q Consensus 425 G~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~-~g~~~Vfa~sdrP--~liys--s~g~l~~~pl~~~~v------~ 493 (1225)
|.+..+.+....+ .+.|+. +|.-..++.+..+ |++++ .++..+.+.++.... .
T Consensus 127 ~~v~VWdi~~~~~----------------th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~ 190 (775)
T KOG0319|consen 127 GRVKVWDIKNGYC----------------THSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRTCLHTMIL 190 (775)
T ss_pred ceEEEEEeeCCEE----------------EEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCchHHHHHHh
Confidence 8888887764321 122222 2222333333333 66654 366777777763321 1
Q ss_pred ccccCCC-CCCCCeEEEEeCCeEEEEEEcCCC-CeeeEEEeCCCcccEEEEecC
Q psy7977 494 HMCSLNA-ESYPDSLALATDSTFTFGTIDEIQ-KLHIRTVPLGEAPRRIAYQES 545 (1225)
Q Consensus 494 ~~s~F~s-e~~p~glv~vs~~~LrI~~i~~~~-~l~ir~IpLg~TprrIay~p~ 545 (1225)
+.+...+ ...+++.-..+.+.=+++.+-+.. .=..+.+|+.+....++|-++
T Consensus 191 H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~ 244 (775)
T KOG0319|consen 191 HKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLRE 244 (775)
T ss_pred hhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEech
Confidence 1111111 112234333333333333333332 234567899999999999876
No 144
>KOG0771|consensus
Probab=46.27 E-value=2.4e+02 Score=34.02 Aligned_cols=58 Identities=19% Similarity=0.273 Sum_probs=38.9
Q ss_pred cccccCCCCCCCCeEEEEe-CCeEEEEEEcCCCC-eeeEEEeCCCcccEEEEecCCCEEEE
Q psy7977 493 NHMCSLNAESYPDSLALAT-DSTFTFGTIDEIQK-LHIRTVPLGEAPRRIAYQESSQTFGV 551 (1225)
Q Consensus 493 ~~~s~F~se~~p~glv~vs-~~~LrI~~i~~~~~-l~ir~IpLg~TprrIay~p~s~~~vV 551 (1225)
+++++++-..+.+.+++-+ ++.+.|....+++. ..+++..++ .++.+.++|.++..+=
T Consensus 282 ~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~-~VT~ltF~Pdsr~~~s 341 (398)
T KOG0771|consen 282 KSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLG-FVTGLTFSPDSRYLAS 341 (398)
T ss_pred CcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhhee-eeeeEEEcCCcCcccc
Confidence 3556665566666666644 56777777777664 456666666 8888999987775443
No 145
>KOG1445|consensus
Probab=45.00 E-value=1.6e+02 Score=37.31 Aligned_cols=63 Identities=17% Similarity=0.284 Sum_probs=46.1
Q ss_pred CCEEEEE-ECCeEEEEEeeccceeEEeee---cc---CceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCC
Q psy7977 316 KNQVLCA-TGCDVYYLEVHGSEIKQLAHR---AL---EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP 388 (1225)
Q Consensus 316 ~~~VlVa-sgg~Lv~feid~~~L~ev~~~---~l---~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~ 388 (1225)
+.+++|+ +++.|-+..+..+++.|.++. .+ ...|.+|-.-++ .+++++++.+ |.+|++|.|.
T Consensus 640 ~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPL----------AadvLa~asy-d~Ti~lWDl~ 708 (1012)
T KOG1445|consen 640 DERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPL----------AADVLAVASY-DSTIELWDLA 708 (1012)
T ss_pred hHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecch----------hhhHhhhhhc-cceeeeeehh
Confidence 4578887 788888888877666664321 11 356777777664 4778999998 9999999997
Q ss_pred C
Q psy7977 389 S 389 (1225)
Q Consensus 389 ~ 389 (1225)
.
T Consensus 709 ~ 709 (1012)
T KOG1445|consen 709 N 709 (1012)
T ss_pred h
Confidence 5
No 146
>KOG0643|consensus
Probab=43.92 E-value=1.5e+02 Score=34.04 Aligned_cols=134 Identities=17% Similarity=0.238 Sum_probs=76.3
Q ss_pred ceEEEEEcCceeeeeccCCcccccCeEEEEeeCCCeEEEEc---cCcEEEEecCCcceeeeecCCCCCcEEEEEecCCEE
Q psy7977 243 HTRVLTLSGAEVEETEMGGFTSDQQTFYCGNVDPRTVLQVT---PSAAILISTESKARVSSWEPPNGKSISVVSCNKNQV 319 (1225)
Q Consensus 243 ~T~Vl~i~ge~veEv~~sgF~~~~~TL~ag~l~~~~iVQVT---~~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n~~~V 319 (1225)
.|.-++++||-+-+.. .-.-++++..+....=.-|| .+.++|.|.++++.+..|+.+.-.+.+.-+..++++
T Consensus 34 ~~vw~s~nGerlGty~-----GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~ 108 (327)
T KOG0643|consen 34 PTVWYSLNGERLGTYD-----GHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLI 108 (327)
T ss_pred ceEEEecCCceeeeec-----CCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEE
Confidence 3445555565443331 12234555555332222222 467899999999999999987655556666678888
Q ss_pred EEEE------CCeEEEEEeecc--ceeE---Eeeecc-CceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeC
Q psy7977 320 LCAT------GCDVYYLEVHGS--EIKQ---LAHRAL-EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL 387 (1225)
Q Consensus 320 lVas------gg~Lv~feid~~--~L~e---v~~~~l-~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL 387 (1225)
++++ .+.+..|++.+. ++.. +-+... ++.++..-..+ ...+++.|-. +|+|.+|++
T Consensus 109 l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~-----------l~~~ii~Ghe-~G~is~~da 176 (327)
T KOG0643|consen 109 LASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGP-----------LGETIIAGHE-DGSISIYDA 176 (327)
T ss_pred EEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecc-----------cCCEEEEecC-CCcEEEEEc
Confidence 8863 256777877532 2221 112221 23333222232 2556766765 999999999
Q ss_pred CC-cceE
Q psy7977 388 PS-LEEV 393 (1225)
Q Consensus 388 ~~-Le~v 393 (1225)
.+ .+.+
T Consensus 177 ~~g~~~v 183 (327)
T KOG0643|consen 177 RTGKELV 183 (327)
T ss_pred ccCceee
Confidence 76 4443
No 147
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=43.76 E-value=52 Score=25.09 Aligned_cols=30 Identities=20% Similarity=0.200 Sum_probs=24.1
Q ss_pred cCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEe
Q psy7977 345 LEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLS 386 (1225)
Q Consensus 345 l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~Ils 386 (1225)
-...|.|++..+. ..+++.|.. |++|++|+
T Consensus 10 h~~~i~~i~~~~~-----------~~~~~s~~~-D~~i~vwd 39 (39)
T PF00400_consen 10 HSSSINSIAWSPD-----------GNFLASGSS-DGTIRVWD 39 (39)
T ss_dssp SSSSEEEEEEETT-----------SSEEEEEET-TSEEEEEE
T ss_pred CCCcEEEEEEecc-----------cccceeeCC-CCEEEEEC
Confidence 3578899999763 568888887 99999985
No 148
>KOG1273|consensus
Probab=43.38 E-value=6.2e+02 Score=29.87 Aligned_cols=175 Identities=14% Similarity=0.081 Sum_probs=85.5
Q ss_pred cCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCc-ccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCccccceeee
Q psy7977 368 KAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIP-RSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVT 446 (1225)
Q Consensus 368 ~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P-~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~ 446 (1225)
-..++|+||. ||.|.||.+.++..-- .+.....| .|++-.. ..-.|+-..+|-.+..+.+-. |.+ ..+.+|
T Consensus 34 ~G~~lAvGc~-nG~vvI~D~~T~~iar--~lsaH~~pi~sl~WS~--dgr~LltsS~D~si~lwDl~~--gs~-l~rirf 105 (405)
T KOG1273|consen 34 WGDYLAVGCA-NGRVVIYDFDTFRIAR--MLSAHVRPITSLCWSR--DGRKLLTSSRDWSIKLWDLLK--GSP-LKRIRF 105 (405)
T ss_pred Ccceeeeecc-CCcEEEEEccccchhh--hhhccccceeEEEecC--CCCEeeeecCCceeEEEeccC--CCc-eeEEEc
Confidence 3679999998 9999999998765311 11101122 3444332 234566677777776665533 331 122222
Q ss_pred ecCccceEEEEeeCC--ceEEEEecCCcEEEEEcCCeeEEeecccc-ccccccc---CCCCCCCCeEEE-EeCCeEEEEE
Q psy7977 447 LGTQPTVLKTFRSLS--TTNVFACSDRPTVIYSSNHKLVFSNVNLR-QVNHMCS---LNAESYPDSLAL-ATDSTFTFGT 519 (1225)
Q Consensus 447 LG~~pV~L~~~~~~g--~~~Vfa~sdrP~liyss~g~l~~~pl~~~-~v~~~s~---F~se~~p~glv~-vs~~~LrI~~ 519 (1225)
..||-...+.... ..-+..+-..|.++--++++-.+.|.+.+ ..+..++ |+. -++.++. .+.+-|.+..
T Consensus 106 --~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr--~g~yIitGtsKGkllv~~ 181 (405)
T KOG1273|consen 106 --DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDR--RGKYIITGTSKGKLLVYD 181 (405)
T ss_pred --cCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccC--CCCEEEEecCcceEEEEe
Confidence 2344333332111 22233345668877655666677776654 2333333 322 2232222 2345566666
Q ss_pred EcCCCCeeeEEEeCCCcccEEEEecCCCEEEEEEE
Q psy7977 520 IDEIQKLHIRTVPLGEAPRRIAYQESSQTFGVITT 554 (1225)
Q Consensus 520 i~~~~~l~ir~IpLg~TprrIay~p~s~~~vV~t~ 554 (1225)
.+...-.+.-+|---...+.|.++-.++.+++=|+
T Consensus 182 a~t~e~vas~rits~~~IK~I~~s~~g~~liiNts 216 (405)
T KOG1273|consen 182 AETLECVASFRITSVQAIKQIIVSRKGRFLIINTS 216 (405)
T ss_pred cchheeeeeeeechheeeeEEEEeccCcEEEEecC
Confidence 55542111111222234455555555555555553
No 149
>KOG2445|consensus
Probab=43.15 E-value=59 Score=37.67 Aligned_cols=97 Identities=19% Similarity=0.274 Sum_probs=0.0
Q ss_pred EEECCCCcEEEEEE-----CCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeC--CcEEEEEEEE
Q psy7977 1009 IIDQNTFEILHAHQ-----LFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDD--GKLQQIAEKE 1081 (1225)
Q Consensus 1009 lvdp~t~~~i~~~e-----L~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~--~kL~lv~~~e 1081 (1225)
.+|-..|+..+.+. +..|+...+..+-......+++|+||. .|+.+..++.++|+.++ +|..-+.+-.
T Consensus 146 p~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs-----~e~a~~~~~~~Iye~~e~~rKw~kva~L~ 220 (361)
T KOG2445|consen 146 PMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGS-----DEDAPHLNKVKIYEYNENGRKWLKVAELP 220 (361)
T ss_pred ccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEc-----ccCCccccceEEEEecCCcceeeeehhcC
Q ss_pred e-cCceeeec--cccC---eEEEEeCCE-EEEEEcC
Q psy7977 1082 I-KGACYSMC--EFNG---KLLASINST-VRLFEWT 1110 (1225)
Q Consensus 1082 v-~G~v~al~--~f~G---~LLa~vg~~-l~vy~l~ 1110 (1225)
- ..+|++|+ +--| ++||-.-+. |+||.++
T Consensus 221 d~~dpI~di~wAPn~Gr~y~~lAvA~kDgv~I~~v~ 256 (361)
T KOG2445|consen 221 DHTDPIRDISWAPNIGRSYHLLAVATKDGVRIFKVK 256 (361)
T ss_pred CCCCcceeeeeccccCCceeeEEEeecCcEEEEEEe
No 150
>KOG0301|consensus
Probab=43.03 E-value=3.9e+02 Score=34.42 Aligned_cols=196 Identities=13% Similarity=0.157 Sum_probs=114.1
Q ss_pred EEEEEECCCCcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCC-cEEEEEEEEecC
Q psy7977 1006 NLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDG-KLQQIAEKEIKG 1084 (1225)
Q Consensus 1006 ~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~-kL~lv~~~ev~G 1084 (1225)
.+++-++...+-+..+.++..+.......|-++. .+..+++|- . -+.|.+|..... -+..+ ..-++
T Consensus 36 t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~-~~~~l~~g~-----~-----D~~i~v~~~~~~~P~~~L--kgH~s 102 (745)
T KOG0301|consen 36 TVKVWAKKGKQYLETHAFEGPKGFIANSICYAES-DKGRLVVGG-----M-----DTTIIVFKLSQAEPLYTL--KGHKS 102 (745)
T ss_pred ceeeeeccCcccccceecccCcceeeccceeccc-cCcceEeec-----c-----cceEEEEecCCCCchhhh--hcccc
Confidence 4777777666666666666555544433344442 345677773 1 135557777642 22222 22346
Q ss_pred ceeeeccc-cCeEEEE-eCCEEEEEEcCCCceeeeeecccceeEEEEEEEEC-CEEEEeeccccEEEEEEecCCCeEEEE
Q psy7977 1085 ACYSMCEF-NGKLLAS-INSTVRLFEWTNEKELRLECSHFNNIIALFLKVKG-DFILVGDLMRSLTLLQYKTMEGSFEEI 1161 (1225)
Q Consensus 1085 ~v~al~~f-~G~LLa~-vg~~l~vy~l~~~~~L~~e~~~~~~~i~~~l~~~g-~~IlvGD~~kSv~~l~y~~~~~~L~~~ 1161 (1225)
-|.+|..+ .|.|+.| --+++++|..++-. ......+.. +-.+.+.+ +.++-|-+=|.+-+.+= ...+-.|
T Consensus 103 nVC~ls~~~~~~~iSgSWD~TakvW~~~~l~---~~l~gH~as-VWAv~~l~e~~~vTgsaDKtIklWk~---~~~l~tf 175 (745)
T KOG0301|consen 103 NVCSLSIGEDGTLISGSWDSTAKVWRIGELV---YSLQGHTAS-VWAVASLPENTYVTGSADKTIKLWKG---GTLLKTF 175 (745)
T ss_pred ceeeeecCCcCceEecccccceEEecchhhh---cccCCcchh-eeeeeecCCCcEEeccCcceeeeccC---Cchhhhh
Confidence 67788866 4676665 78999999987522 111122211 12233333 56777777787777543 3333333
Q ss_pred eccCCCceeEEEEeeeCCcEEEEcCCCcEEEEEeCCCCCCccccc--eeEEEEEEEEeCCceeec
Q psy7977 1162 SRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDSAATSDEDRT--HLQEVGTVHLVGDGLVQC 1224 (1225)
Q Consensus 1162 arD~~~~wvta~~~Ld~dt~l~aD~~gNl~vl~~~~~~~~~~~~~--rL~~~~~fhl~Ge~i~~~ 1224 (1225)
.- +.-.|-+..+||+.+|+.++++|-|.....+.+.--+..|+ ..=....+|= +..|+.|
T Consensus 176 ~g--HtD~VRgL~vl~~~~flScsNDg~Ir~w~~~ge~l~~~~ghtn~vYsis~~~~-~~~Ivs~ 237 (745)
T KOG0301|consen 176 SG--HTDCVRGLAVLDDSHFLSCSNDGSIRLWDLDGEVLLEMHGHTNFVYSISMALS-DGLIVST 237 (745)
T ss_pred cc--chhheeeeEEecCCCeEeecCCceEEEEeccCceeeeeeccceEEEEEEecCC-CCeEEEe
Confidence 33 55678899999999999999999998887765544443332 1222334555 5555555
No 151
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=42.24 E-value=57 Score=37.18 Aligned_cols=70 Identities=9% Similarity=0.168 Sum_probs=53.1
Q ss_pred EEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEecCceeeecccc--C------eEEEEeC
Q psy7977 1030 LSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFN--G------KLLASIN 1101 (1225)
Q Consensus 1030 ~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev~G~v~al~~f~--G------~LLa~vg 1101 (1225)
.||+.+.+.+++..-++||..-- + ...=++.||+ ...+.++..+-|.|.|++.|- . -+.+|.|
T Consensus 18 sC~~l~Dl~gDGd~kLvvaD~g~-~----~~~~kLKVyk----Gt~l~~E~~L~d~P~ai~sFy~d~~ep~~P~iAVA~G 88 (257)
T PF14779_consen 18 SCMALADLQGDGDYKLVVADLGT-G----DQNMKLKVYK----GTSLISEITLPDLPSAIVSFYMDEHEPRTPAIAVAAG 88 (257)
T ss_pred ceeEeeecCCCCeEEEEEEecCC-c----CCCceEEEEc----CCChhhcccccCCCeEEEEEeccCCCCCCCeEEEEeC
Confidence 46677777788888899987531 1 1122889995 567888999999999999992 1 3788999
Q ss_pred CEEEEEE
Q psy7977 1102 STVRLFE 1108 (1225)
Q Consensus 1102 ~~l~vy~ 1108 (1225)
+.|.+|.
T Consensus 89 ~~vyiYk 95 (257)
T PF14779_consen 89 PSVYIYK 95 (257)
T ss_pred CEEEEEe
Confidence 9999995
No 152
>KOG0322|consensus
Probab=41.80 E-value=4.8e+02 Score=30.06 Aligned_cols=85 Identities=14% Similarity=0.137 Sum_probs=43.9
Q ss_pred CcEEEEEEecCCeEEEEeCCCc------ceEEeecCCCCCC--c-ccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCcc
Q psy7977 369 AQLAAVGLWTDISARLLSLPSL------EEVCKEPLGGEII--P-RSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRL 439 (1225)
Q Consensus 369 s~~laVG~w~d~tv~IlsL~~L------e~v~~~~L~~~~~--P-~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~L 439 (1225)
+.+++++.+.+|.+.+|.+..- ...+....+..+. | -|+-++.. ...=+.|-.+..++.|.++..+|++
T Consensus 164 s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~--~~rGisgga~dkl~~~Sl~~s~gsl 241 (323)
T KOG0322|consen 164 STFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASS--CDRGISGGADDKLVMYSLNHSTGSL 241 (323)
T ss_pred ceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechh--hcCCcCCCccccceeeeeccccCcc
Confidence 4555555556999999998642 2221111110001 1 12222211 1112456677788889988877777
Q ss_pred ccceeee---ecCccceEE
Q psy7977 440 TDKKKVT---LGTQPTVLK 455 (1225)
Q Consensus 440 s~~k~~~---LG~~pV~L~ 455 (1225)
.-++.+. -|...++++
T Consensus 242 q~~~e~~lknpGv~gvrIR 260 (323)
T KOG0322|consen 242 QIRKEITLKNPGVSGVRIR 260 (323)
T ss_pred cccceEEecCCCccceEEc
Confidence 6555433 344555544
No 153
>KOG1517|consensus
Probab=41.71 E-value=1.1e+03 Score=32.29 Aligned_cols=138 Identities=16% Similarity=0.184 Sum_probs=83.5
Q ss_pred ccCcEEEEecCC---cceeeeecCCCC-CcEEEEEecC-CEE-EEE--ECCeEEEEEeecc----ceeEEeeeccCceeE
Q psy7977 283 TPSAAILISTES---KARVSSWEPPNG-KSISVVSCNK-NQV-LCA--TGCDVYYLEVHGS----EIKQLAHRALEYEVA 350 (1225)
Q Consensus 283 T~~~IRli~~~~---~~~i~eW~~p~g-~~Iv~As~n~-~~V-lVa--sgg~Lv~feid~~----~L~ev~~~~l~~eIS 350 (1225)
-..+||++|... ...+..|++-.. .+|++++.+. ++. +|+ .+|.|..+++... -+..+...+.++..+
T Consensus 1229 aDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lT 1308 (1387)
T KOG1517|consen 1229 ADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALT 1308 (1387)
T ss_pred cCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccce
Confidence 356789998533 136778875322 2499999985 444 554 6899999987642 123334455566688
Q ss_pred EEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCC--cceEE-eecCCCCCCcccEEEEeeCCeeEEEEEECCCcE
Q psy7977 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS--LEEVC-KEPLGGEIIPRSILMTCFEGHCYLLVALGDGSM 427 (1225)
Q Consensus 351 cLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~--Le~v~-~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L 427 (1225)
||.+-+. ++.+|-|. .+.+.||++.. +..+- -....+..+++..+++.=+-.+.|-+|..|-.+
T Consensus 1309 al~VH~h-----------apiiAsGs--~q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V 1375 (1387)
T KOG1517|consen 1309 ALTVHEH-----------APIIASGS--AQLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTV 1375 (1387)
T ss_pred eeeeccC-----------CCeeeecC--cceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceE
Confidence 8887542 56677665 38899999963 33221 111111223333444322345678899888778
Q ss_pred EEEEEc
Q psy7977 428 FYFSLD 433 (1225)
Q Consensus 428 ~~y~ld 433 (1225)
-.|.-.
T Consensus 1376 ~iYs~~ 1381 (1387)
T KOG1517|consen 1376 SIYSCE 1381 (1387)
T ss_pred EEeecC
Confidence 888754
No 154
>KOG0276|consensus
Probab=41.04 E-value=9e+02 Score=31.07 Aligned_cols=172 Identities=15% Similarity=0.104 Sum_probs=97.3
Q ss_pred cCcEEEEecCCcceeeeecCCCCCcEEEEEec--CCEEEEEE-CCeEEEEEeeccceeEEeee-ccCceeEEEEeccCCC
Q psy7977 284 PSAAILISTESKARVSSWEPPNGKSISVVSCN--KNQVLCAT-GCDVYYLEVHGSEIKQLAHR-ALEYEVACLDISPLSN 359 (1225)
Q Consensus 284 ~~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n--~~~VlVas-gg~Lv~feid~~~L~ev~~~-~l~~eIScLai~~~~~ 359 (1225)
...||+++.+++.++..+.+-.+ -|.+-++. .|+++-++ +-.|-...-+.. ....... .-++-|-++++.|..
T Consensus 76 D~~IrVfnynt~ekV~~FeAH~D-yIR~iavHPt~P~vLtsSDDm~iKlW~we~~-wa~~qtfeGH~HyVMqv~fnPkD- 152 (794)
T KOG0276|consen 76 DMQIRVFNYNTGEKVKTFEAHSD-YIRSIAVHPTLPYVLTSSDDMTIKLWDWENE-WACEQTFEGHEHYVMQVAFNPKD- 152 (794)
T ss_pred CceEEEEecccceeeEEeecccc-ceeeeeecCCCCeEEecCCccEEEEeeccCc-eeeeeEEcCcceEEEEEEecCCC-
Confidence 35689999988888888875332 35555554 67777774 445555544422 1111111 124678889998742
Q ss_pred CCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEe-ecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCC-
Q psy7977 360 EETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCK-EPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG- 437 (1225)
Q Consensus 360 ~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~-~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg- 437 (1225)
.+.+|-++- |.||.||+|..-...++ ++- +.-...+..-.-++.|||+-|-.|-.+-.+.....+.
T Consensus 153 ---------~ntFaS~sL-DrTVKVWslgs~~~nfTl~gH--ekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV 220 (794)
T KOG0276|consen 153 ---------PNTFASASL-DRTVKVWSLGSPHPNFTLEGH--EKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCV 220 (794)
T ss_pred ---------ccceeeeec-cccEEEEEcCCCCCceeeecc--ccCcceEEeccCCCcceEEecCCCceEEEeecchHHHH
Confidence 334555665 99999999953222221 100 0111345444445789999998877776666543211
Q ss_pred -ccccceeeeecCccceEEEEeeCCceEEEEecCCcEEEEE-cCCeeEEee
Q psy7977 438 -RLTDKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYS-SNHKLVFSN 486 (1225)
Q Consensus 438 -~Ls~~k~~~LG~~pV~L~~~~~~g~~~Vfa~sdrP~liys-s~g~l~~~p 486 (1225)
.|.. ..++-+.|+...+-|++|.. ..|.++++.
T Consensus 221 ~TLeG----------------Ht~Nvs~v~fhp~lpiiisgsEDGTvriWh 255 (794)
T KOG0276|consen 221 QTLEG----------------HTNNVSFVFFHPELPIIISGSEDGTVRIWN 255 (794)
T ss_pred HHhhc----------------ccccceEEEecCCCcEEEEecCCccEEEec
Confidence 1111 01233566666677777754 356666654
No 155
>KOG0293|consensus
Probab=39.50 E-value=7.9e+02 Score=30.00 Aligned_cols=276 Identities=13% Similarity=0.078 Sum_probs=134.4
Q ss_pred CcceEeEeeeCCCCCCccEEEEEcCCceEE-EEEcCc-eeeeeccCCcccccCeEEEEeeCCCeEEEEcc--CcEEEEec
Q psy7977 217 GIKGIWALSIGSPKNLDNTLVLSFVGHTRV-LTLSGA-EVEETEMGGFTSDQQTFYCGNVDPRTVLQVTP--SAAILIST 292 (1225)
Q Consensus 217 gv~~iWtl~~~~~~~~d~yLVlSf~~~T~V-l~i~ge-~veEv~~sgF~~~~~TL~ag~l~~~~iVQVT~--~~IRli~~ 292 (1225)
...-+|-+..+. ..+||.-+..+.|.+ +.+..+ .++-. .+---...+-+++.--++++.+--++ ..+++-|.
T Consensus 223 htdEVWfl~FS~---nGkyLAsaSkD~Taiiw~v~~d~~~kl~-~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv 298 (519)
T KOG0293|consen 223 HTDEVWFLQFSH---NGKYLASASKDSTAIIWIVVYDVHFKLK-KTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDV 298 (519)
T ss_pred CCCcEEEEEEcC---CCeeEeeccCCceEEEEEEecCcceeee-eeeecccCceEEEEECCCCCeEEecCchHheeeccC
Confidence 346899998764 578999888888874 444332 11111 00001122223333333443332222 22455554
Q ss_pred CCcceeeeecCCCCCcEEEEEe-cCCEEEEE--ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccC
Q psy7977 293 ESKARVSSWEPPNGKSISVVSC-NKNQVLCA--TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKA 369 (1225)
Q Consensus 293 ~~~~~i~eW~~p~g~~Iv~As~-n~~~VlVa--sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s 369 (1225)
+++..........|.+..+|+- .|.+=+|+ .+++++...+|...+.--+-.. ...|.|+++.+- .
T Consensus 299 ~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr-~~~v~dlait~D-----------g 366 (519)
T KOG0293|consen 299 DTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVR-DPKVHDLAITYD-----------G 366 (519)
T ss_pred CcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccc-cceeEEEEEcCC-----------C
Confidence 4433322222222344444443 35555665 5778887777643222111111 145789998652 2
Q ss_pred cEEEEEEecCCeEEEEeCCCcce---EEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCCccccceeee
Q psy7977 370 QLAAVGLWTDISARLLSLPSLEE---VCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASGRLTDKKKVT 446 (1225)
Q Consensus 370 ~~laVG~w~d~tv~IlsL~~Le~---v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~ 446 (1225)
.+++..+. |..+++|+..+... +..+ ..-.|..+.+ ++-|.++-+.+-.+.-+.+.. ..+. .++
T Consensus 367 k~vl~v~~-d~~i~l~~~e~~~dr~lise~-----~~its~~iS~--d~k~~LvnL~~qei~LWDl~e--~~lv---~kY 433 (519)
T KOG0293|consen 367 KYVLLVTV-DKKIRLYNREARVDRGLISEE-----QPITSFSISK--DGKLALVNLQDQEIHLWDLEE--NKLV---RKY 433 (519)
T ss_pred cEEEEEec-ccceeeechhhhhhhcccccc-----CceeEEEEcC--CCcEEEEEcccCeeEEeecch--hhHH---HHh
Confidence 34444444 99999999975322 2211 1113444432 456778888888877776542 1111 245
Q ss_pred ecCccceEE-EEeeCCce-EEEEecCCc---EEEEEcCCeeEE-eecccccccccccCCCCCCCCeEEEE-eCCeEEEEE
Q psy7977 447 LGTQPTVLK-TFRSLSTT-NVFACSDRP---TVIYSSNHKLVF-SNVNLRQVNHMCSLNAESYPDSLALA-TDSTFTFGT 519 (1225)
Q Consensus 447 LG~~pV~L~-~~~~~g~~-~Vfa~sdrP---~liyss~g~l~~-~pl~~~~v~~~s~F~se~~p~glv~v-s~~~LrI~~ 519 (1225)
.|.+.-++. +-..+|.. ..+|.|+-- ++-....|++.- .+=....+++++- +++.|.-++-+ +++++||=.
T Consensus 434 ~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVsw--NP~~p~m~ASasDDgtIRIWg 511 (519)
T KOG0293|consen 434 FGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSW--NPADPEMFASASDDGTIRIWG 511 (519)
T ss_pred hcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEec--CCCCHHHhhccCCCCeEEEec
Confidence 665554442 22234444 555555433 333444555432 1111223333331 23445555554 457899877
Q ss_pred EcCC
Q psy7977 520 IDEI 523 (1225)
Q Consensus 520 i~~~ 523 (1225)
..+.
T Consensus 512 ~~~~ 515 (519)
T KOG0293|consen 512 PSDN 515 (519)
T ss_pred CCcc
Confidence 6643
No 156
>KOG0310|consensus
Probab=39.39 E-value=5.1e+02 Score=32.03 Aligned_cols=190 Identities=15% Similarity=0.142 Sum_probs=100.5
Q ss_pred EEEEEEECCCCcEEEEEECCCCC-ceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEec
Q psy7977 1005 HNLLIIDQNTFEILHAHQLFPGE-YALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIK 1083 (1225)
Q Consensus 1005 s~irlvdp~t~~~i~~~eL~~nE-~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev~ 1083 (1225)
.-+++-|-.+..+ .+++...| ++=|..... ..+.++|--++ -|.|.+|+.-... .-+.+-.-.
T Consensus 133 ~v~k~~d~s~a~v--~~~l~~htDYVR~g~~~~----~~~hivvtGsY---------Dg~vrl~DtR~~~-~~v~elnhg 196 (487)
T KOG0310|consen 133 KVVKYWDLSTAYV--QAELSGHTDYVRCGDISP----ANDHIVVTGSY---------DGKVRLWDTRSLT-SRVVELNHG 196 (487)
T ss_pred ceEEEEEcCCcEE--EEEecCCcceeEeecccc----CCCeEEEecCC---------CceEEEEEeccCC-ceeEEecCC
Confidence 4566666666554 55665554 444443322 23444443322 3677888774311 233333344
Q ss_pred Cceeeecccc-C-eEEEEeCCEEEEEEcC-CCceeeeeecccceeEEEEEE--EECCEEEEeeccccEEEEEEecCCCeE
Q psy7977 1084 GACYSMCEFN-G-KLLASINSTVRLFEWT-NEKELRLECSHFNNIIALFLK--VKGDFILVGDLMRSLTLLQYKTMEGSF 1158 (1225)
Q Consensus 1084 G~v~al~~f~-G-~LLa~vg~~l~vy~l~-~~~~L~~e~~~~~~~i~~~l~--~~g~~IlvGD~~kSv~~l~y~~~~~~L 1158 (1225)
-||-.++.+. | .++.|-|+.++|||+- ..+++. +-..+.-. +++|. +.+.+++-|-+=.=|-.+. -..+++
T Consensus 197 ~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~qll~-~~~~H~Kt-VTcL~l~s~~~rLlS~sLD~~VKVfd--~t~~Kv 272 (487)
T KOG0310|consen 197 CPVESVLALPSGSLIASAGGNSVKVWDLTTGGQLLT-SMFNHNKT-VTCLRLASDSTRLLSGSLDRHVKVFD--TTNYKV 272 (487)
T ss_pred CceeeEEEcCCCCEEEEcCCCeEEEEEecCCceehh-hhhcccce-EEEEEeecCCceEeecccccceEEEE--ccceEE
Confidence 5777788774 3 4555788999999997 444443 22223333 35555 3446777777666555543 334444
Q ss_pred EEEeccCCCceeEEEEeeeCC-cEEEEcCCCcEEEEEeCCCCC-CccccceeEEEEEEEE
Q psy7977 1159 EEISRDYNPNWMTSIEILDDE-LFLGAENSYNLFICQKDSAAT-SDEDRTHLQEVGTVHL 1216 (1225)
Q Consensus 1159 ~~~arD~~~~wvta~~~Ld~d-t~l~aD~~gNl~vl~~~~~~~-~~~~~~rL~~~~~fhl 1216 (1225)
+- .=..|.-+.+++.-++| +++.+=.+|-+.+-+.-.+.. +.+...+......||+
T Consensus 273 v~--s~~~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~~k~k~s~~~~~r~~r~~~~~v 330 (487)
T KOG0310|consen 273 VH--SWKYPGPVLSIAVSPDDQTVVIGMSNGLVSIRRREVKKKPSKEPKRRADRSDGFFV 330 (487)
T ss_pred EE--eeecccceeeEEecCCCceEEEecccceeeeehhhcccCCCccccccccccccceE
Confidence 43 11234445555555544 777777777777664432222 2233344444444444
No 157
>KOG1645|consensus
Probab=37.52 E-value=85 Score=37.64 Aligned_cols=63 Identities=11% Similarity=0.104 Sum_probs=45.9
Q ss_pred EEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCC
Q psy7977 371 LAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG 437 (1225)
Q Consensus 371 ~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg 437 (1225)
.+.++.. ++.|.|+++++-..+.+.... ..+-|.+. ++++..+++.|+.||.++.|.+-..++
T Consensus 208 Ll~~asl-~nkiki~dlet~~~vssy~a~--~~~wSC~w-Dlde~h~IYaGl~nG~VlvyD~R~~~~ 270 (463)
T KOG1645|consen 208 LLGLASL-GNKIKIMDLETSCVVSSYIAY--NQIWSCCW-DLDERHVIYAGLQNGMVLVYDMRQPEG 270 (463)
T ss_pred eeeeecc-CceEEEEecccceeeeheecc--CCceeeee-ccCCcceeEEeccCceEEEEEccCCCc
Confidence 4556665 999999999875555554443 45566664 455689999999999999999865444
No 158
>KOG0642|consensus
Probab=35.70 E-value=6.2e+02 Score=31.88 Aligned_cols=109 Identities=21% Similarity=0.265 Sum_probs=60.2
Q ss_pred CCeEEEEeecCCeEEEEEeeCCCCCCCceEEEeeeecc-ccceeeEEeeccccCCccEEEEEecCCCccEEEEeec----
Q psy7977 130 NGVVFVGSRLGDSQLVKLNRSPDENGTYVSVMESFTNL-APIIDMVVVDLERQGQGQLVTCSGGFKEGSLRIIRNG---- 204 (1225)
Q Consensus 130 ~g~LFvGS~~GDS~L~~i~~~~ddd~~~l~v~d~l~Nl-gPI~D~~v~d~~~~~~~qLva~sG~g~~GsLrilR~G---- 204 (1225)
...|+-+|+.|-=-|+.+....+.....++.+-++.+. |||+-.++.... .++| -.|.+|++|-..--
T Consensus 306 ep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~----~~~y---sgg~Dg~I~~w~~p~n~d 378 (577)
T KOG0642|consen 306 EPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNG----EHCY---SGGIDGTIRCWNLPPNQD 378 (577)
T ss_pred CCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCc----eEEE---eeccCceeeeeccCCCCC
Confidence 46788899988766677733222222346777777776 999888776532 2333 34678888877322
Q ss_pred ----ceeeEEEEeeCCCc-ceEeEeeeCCCCCCccEEEEEcCCceEEEE
Q psy7977 205 ----IGIEEHACIDLPGI-KGIWALSIGSPKNLDNTLVLSFVGHTRVLT 248 (1225)
Q Consensus 205 ----I~~~~~~s~eLpgv-~~iWtl~~~~~~~~d~yLVlSf~~~T~Vl~ 248 (1225)
..+..+.. -+-|. .++|.+-.+. ..+..+.+|+.+.=+...
T Consensus 379 p~ds~dp~vl~~-~l~Ghtdavw~l~~s~--~~~~Llscs~DgTvr~w~ 424 (577)
T KOG0642|consen 379 PDDSYDPSVLSG-TLLGHTDAVWLLALSS--TKDRLLSCSSDGTVRLWE 424 (577)
T ss_pred cccccCcchhcc-ceeccccceeeeeecc--cccceeeecCCceEEeec
Confidence 11212111 13343 5889887654 233444445443333333
No 159
>KOG2321|consensus
Probab=35.68 E-value=6.5e+02 Score=31.93 Aligned_cols=109 Identities=9% Similarity=0.045 Sum_probs=69.4
Q ss_pred eccc-cCeEEEEeCCEEEEEEcCCCceee-eeecccceeEEEEEEEECCEEEEeeccccEEEEEEecCCC---eEEEEec
Q psy7977 1089 MCEF-NGKLLASINSTVRLFEWTNEKELR-LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYKTMEG---SFEEISR 1163 (1225)
Q Consensus 1089 l~~f-~G~LLa~vg~~l~vy~l~~~~~L~-~e~~~~~~~i~~~l~~~g~~IlvGD~~kSv~~l~y~~~~~---~L~~~ar 1163 (1225)
+..+ ...+++|.|..|+=+.|.+..-|. .+...-..- ++.+.....+|.+|----.|-|. ++-.. .....+-
T Consensus 141 y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN-~v~in~~hgLla~Gt~~g~VEfw--DpR~ksrv~~l~~~~ 217 (703)
T KOG2321|consen 141 YHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELN-VVSINEEHGLLACGTEDGVVEFW--DPRDKSRVGTLDAAS 217 (703)
T ss_pred ccCCCccEEEeecCcceEEEEccccccccccccccccce-eeeecCccceEEecccCceEEEe--cchhhhhheeeeccc
Confidence 3344 356788999988888887776665 333322222 57777777888888766556553 33211 1111121
Q ss_pred c--C-----CCceeEEEEeeeCC-cEEEEcCCCcEEEEEeCCCCC
Q psy7977 1164 D--Y-----NPNWMTSIEILDDE-LFLGAENSYNLFICQKDSAAT 1200 (1225)
Q Consensus 1164 D--~-----~~~wvta~~~Ld~d-t~l~aD~~gNl~vl~~~~~~~ 1200 (1225)
. . ....|||+.|=|++ ++.++-..|-++++.+-...|
T Consensus 218 ~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~p 262 (703)
T KOG2321|consen 218 SVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKP 262 (703)
T ss_pred ccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCc
Confidence 1 1 23459999998766 899999999999988766555
No 160
>KOG0270|consensus
Probab=35.63 E-value=1.7e+02 Score=35.62 Aligned_cols=93 Identities=13% Similarity=0.189 Sum_probs=57.5
Q ss_pred CcEEEEecCC-cceeeeecCCCCCcEEEEEecCCEEEEE--ECCeEEEEEeeccceeEE-eeeccCceeEEEEeccCCCC
Q psy7977 285 SAAILISTES-KARVSSWEPPNGKSISVVSCNKNQVLCA--TGCDVYYLEVHGSEIKQL-AHRALEYEVACLDISPLSNE 360 (1225)
Q Consensus 285 ~~IRli~~~~-~~~i~eW~~p~g~~Iv~As~n~~~VlVa--sgg~Lv~feid~~~L~ev-~~~~l~~eIScLai~~~~~~ 360 (1225)
+.|++.|... ...-.+|+..++...+.-.-+.+...++ .+|.+.+|.+.+.+ +.+ ..+.-+.+||||++...
T Consensus 309 ~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~-~~vwt~~AHd~~ISgl~~n~~--- 384 (463)
T KOG0270|consen 309 GTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPG-KPVWTLKAHDDEISGLSVNIQ--- 384 (463)
T ss_pred ceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCC-CceeEEEeccCCcceEEecCC---
Confidence 3455555431 2345678877654444444445555554 68999999987543 111 22234679999998653
Q ss_pred CCCCccccCcEEEEEEecCCeEEEEeCCC
Q psy7977 361 ETSSEPAKAQLAAVGLWTDISARLLSLPS 389 (1225)
Q Consensus 361 ~~~~~~~~s~~laVG~w~d~tv~IlsL~~ 389 (1225)
...+++-+.. |++|.+++++.
T Consensus 385 -------~p~~l~t~s~-d~~Vklw~~~~ 405 (463)
T KOG0270|consen 385 -------TPGLLSTAST-DKVVKLWKFDV 405 (463)
T ss_pred -------CCcceeeccc-cceEEEEeecC
Confidence 3445666655 99999999974
No 161
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=35.31 E-value=96 Score=40.26 Aligned_cols=64 Identities=14% Similarity=0.303 Sum_probs=54.0
Q ss_pred ECCEEEEeeccccEEEEEEecCCCeEEEEeccCCCceeEEEEeeeCC-------cEEEEcCCCcEEEEEeC
Q psy7977 1133 KGDFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE-------LFLGAENSYNLFICQKD 1196 (1225)
Q Consensus 1133 ~g~~IlvGD~~kSv~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~d-------t~l~aD~~gNl~vl~~~ 1196 (1225)
...+|+|||=-.+|+++.|...+.+...........-+-++.|+|++ .++++|-.||+++++..
T Consensus 176 ~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~ 246 (717)
T PF08728_consen 176 KSRLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK 246 (717)
T ss_pred cceEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence 34789999999999999999877777666555677788899999876 57889999999998883
No 162
>KOG0295|consensus
Probab=34.10 E-value=4.2e+02 Score=31.66 Aligned_cols=102 Identities=18% Similarity=0.193 Sum_probs=60.5
Q ss_pred eEEEEccCcEEEEecCCcceeeeecCCCC------------------------CcEEEEEec--CCEEEEE--ECCeEEE
Q psy7977 278 TVLQVTPSAAILISTESKARVSSWEPPNG------------------------KSISVVSCN--KNQVLCA--TGCDVYY 329 (1225)
Q Consensus 278 ~iVQVT~~~IRli~~~~~~~i~eW~~p~g------------------------~~Iv~As~n--~~~VlVa--sgg~Lv~ 329 (1225)
+++||+..|..+-.....+.+.-|....+ ..|.-|.-+ +.|++.+ .++.|-.
T Consensus 239 r~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~ 318 (406)
T KOG0295|consen 239 RMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKI 318 (406)
T ss_pred EEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEE
Confidence 66777777666655443344455532111 123333332 4466665 4778887
Q ss_pred EEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcce
Q psy7977 330 LEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEE 392 (1225)
Q Consensus 330 feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~ 392 (1225)
.++..+. -...-...+++|..+++.| ..+|++=+. .|+++++|++..+..
T Consensus 319 wdv~tg~-cL~tL~ghdnwVr~~af~p-----------~Gkyi~Sca-DDktlrvwdl~~~~c 368 (406)
T KOG0295|consen 319 WDVSTGM-CLFTLVGHDNWVRGVAFSP-----------GGKYILSCA-DDKTLRVWDLKNLQC 368 (406)
T ss_pred EeccCCe-EEEEEecccceeeeeEEcC-----------CCeEEEEEe-cCCcEEEEEecccee
Confidence 7776542 1122234578999999865 255666555 499999999986543
No 163
>KOG2079|consensus
Probab=33.61 E-value=8.4e+02 Score=33.27 Aligned_cols=111 Identities=14% Similarity=0.135 Sum_probs=61.8
Q ss_pred cEEEEEecCCEEEEEECCeEEEEEeeccceeEEe-eeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEe
Q psy7977 308 SISVVSCNKNQVLCATGCDVYYLEVHGSEIKQLA-HRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLS 386 (1225)
Q Consensus 308 ~Iv~As~n~~~VlVasgg~Lv~feid~~~L~ev~-~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~Ils 386 (1225)
.|..|..+.+.++..++|.+..+.+. ++|.... .......|+|++++. .+.+++.|.. +|-|.++.
T Consensus 92 v~s~a~~~~~ivi~Ts~ghvl~~d~~-~nL~~~~~ne~v~~~Vtsvafn~-----------dg~~l~~G~~-~G~V~v~D 158 (1206)
T KOG2079|consen 92 VISSAIVVVPIVIGTSHGHVLLSDMT-GNLGPLHQNERVQGPVTSVAFNQ-----------DGSLLLAGLG-DGHVTVWD 158 (1206)
T ss_pred eeeeeeeeeeEEEEcCchhhhhhhhh-cccchhhcCCccCCcceeeEecC-----------CCceeccccC-CCcEEEEE
Confidence 34444444433333478888777654 2354322 223456789999864 3568899997 99999999
Q ss_pred CCCcceEEeecCCCCCCc-ccEEEEee-CCeeEEEEEECCCcEEEEEEc
Q psy7977 387 LPSLEEVCKEPLGGEIIP-RSILMTCF-EGHCYLLVALGDGSMFYFSLD 433 (1225)
Q Consensus 387 L~~Le~v~~~~L~~~~~P-~SIll~~l-~~~~~LlVGl~nG~L~~y~ld 433 (1225)
...-..+..-.. ...| ..+..+.. ++...|+.+-+-|......++
T Consensus 159 ~~~~k~l~~i~e--~~ap~t~vi~v~~t~~nS~llt~D~~Gsf~~lv~n 205 (1206)
T KOG2079|consen 159 MHRAKILKVITE--HGAPVTGVIFVGRTSQNSKLLTSDTGGSFWKLVFN 205 (1206)
T ss_pred ccCCcceeeeee--cCCccceEEEEEEeCCCcEEEEccCCCceEEEEec
Confidence 864222221111 1223 23444333 333457777777776555444
No 164
>KOG0280|consensus
Probab=33.41 E-value=3.5e+02 Score=31.56 Aligned_cols=99 Identities=14% Similarity=0.202 Sum_probs=62.6
Q ss_pred eCCCeEEEEccCcEEEEecCCcceeeeecCCCCCc--EEEEEecCCEEEEE--ECCeEEEEEee-ccceeEEeeeccCce
Q psy7977 274 VDPRTVLQVTPSAAILISTESKARVSSWEPPNGKS--ISVVSCNKNQVLCA--TGCDVYYLEVH-GSEIKQLAHRALEYE 348 (1225)
Q Consensus 274 l~~~~iVQVT~~~IRli~~~~~~~i~eW~~p~g~~--Iv~As~n~~~VlVa--sgg~Lv~feid-~~~L~ev~~~~l~~e 348 (1225)
+.++++-=|+.+..++ +.++.|++- +.+ +.+.+-++|.++-. +++.+....+. +.++....++.-..-
T Consensus 140 ~s~G~~~~v~~t~~~l------e~vq~wk~H-e~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~G 212 (339)
T KOG0280|consen 140 DSRGSISGVYETEMVL------EKVQTWKVH-EFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSG 212 (339)
T ss_pred cCCCcEEEEecceeee------eeccccccc-ceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecc
Confidence 3456666677777776 466788752 333 34444557777776 57788877765 334444333333344
Q ss_pred eEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCc
Q psy7977 349 VACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSL 390 (1225)
Q Consensus 349 IScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~L 390 (1225)
|.||.-++ .+..+++.|.+ |-.++++....+
T Consensus 213 V~SI~ss~----------~~~~~I~TGsY-De~i~~~DtRnm 243 (339)
T KOG0280|consen 213 VVSIYSSP----------PKPTYIATGSY-DECIRVLDTRNM 243 (339)
T ss_pred eEEEecCC----------CCCceEEEecc-ccceeeeehhcc
Confidence 66665543 24679999999 889999888653
No 165
>KOG1034|consensus
Probab=33.34 E-value=1.8e+02 Score=34.15 Aligned_cols=143 Identities=18% Similarity=0.297 Sum_probs=88.0
Q ss_pred CCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEecCceeeeccccCe--EEEE--eCCEEEEEEcCCCceee
Q psy7977 1041 PNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGK--LLAS--INSTVRLFEWTNEKELR 1116 (1225)
Q Consensus 1041 ~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev~G~v~al~~f~G~--LLa~--vg~~l~vy~l~~~~~L~ 1116 (1225)
+.+|+|+|- .+|-|+|+++..+++.--. --.-+++.+|....-+ ||.+ --++||+|+......+.
T Consensus 104 ~~p~la~~G----------~~GvIrVid~~~~~~~~~~-~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~ 172 (385)
T KOG1034|consen 104 GNPFLAAGG----------YLGVIRVIDVVSGQCSKNY-RGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVA 172 (385)
T ss_pred CCeeEEeec----------ceeEEEEEecchhhhccce-eccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEE
Confidence 578999883 4899999999865331000 0112344444433222 5444 44799999999887654
Q ss_pred ----eeecccceeEEEEEEEECCEEEEeeccccEEEEEEe--cCCCeEEEE-----------------------eccCCC
Q psy7977 1117 ----LECSHFNNIIALFLKVKGDFILVGDLMRSLTLLQYK--TMEGSFEEI-----------------------SRDYNP 1167 (1225)
Q Consensus 1117 ----~e~~~~~~~i~~~l~~~g~~IlvGD~~kSv~~l~y~--~~~~~L~~~-----------------------arD~~~ 1167 (1225)
+|+ +-...+.+..+..|+||+-+-+=.|+-+.+-+ +-+++++.. .+|.+.
T Consensus 173 VfGG~eg-HrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHr 251 (385)
T KOG1034|consen 173 VFGGVEG-HRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHR 251 (385)
T ss_pred Eeccccc-ccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCcccccccccccccccc
Confidence 221 22334345555678999999999999887766 223333322 456666
Q ss_pred ceeEEEEeeeCCcEEEEcCCCcEEEEEeCC
Q psy7977 1168 NWMTSIEILDDELFLGAENSYNLFICQKDS 1197 (1225)
Q Consensus 1168 ~wvta~~~Ld~dt~l~aD~~gNl~vl~~~~ 1197 (1225)
..|-|+-++- .++.+=.-+|-.++=+|.
T Consensus 252 nyVDCvrw~g--d~ilSkscenaI~~w~pg 279 (385)
T KOG1034|consen 252 NYVDCVRWFG--DFILSKSCENAIVCWKPG 279 (385)
T ss_pred chHHHHHHHh--hheeecccCceEEEEecc
Confidence 6665555543 577778888877776663
No 166
>KOG1240|consensus
Probab=32.74 E-value=1.1e+03 Score=32.61 Aligned_cols=99 Identities=8% Similarity=-0.019 Sum_probs=57.6
Q ss_pred ECCeEEEEEeecc-ceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCC
Q psy7977 323 TGCDVYYLEVHGS-EIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGE 401 (1225)
Q Consensus 323 sgg~Lv~feid~~-~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~ 401 (1225)
..+.++++.+... .+-......-.+-||++++.+ ...|+++|+. .|.+.+|.|.=-..+..-..|..
T Consensus 1171 ~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp-----------~~~WlviGts-~G~l~lWDLRF~~~i~sw~~P~~ 1238 (1431)
T KOG1240|consen 1171 DLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDP-----------WCNWLVIGTS-RGQLVLWDLRFRVPILSWEHPAR 1238 (1431)
T ss_pred eccceEEecchhhhhHHhhhcCccccceeEEEecC-----------CceEEEEecC-CceEEEEEeecCceeecccCccc
Confidence 5678888865432 111111111135678888765 2569999997 99999999863233433233323
Q ss_pred CCcccEEEEeeCC--eeEEEEEE-CCCcEEEEEEc
Q psy7977 402 IIPRSILMTCFEG--HCYLLVAL-GDGSMFYFSLD 433 (1225)
Q Consensus 402 ~~P~SIll~~l~~--~~~LlVGl-~nG~L~~y~ld 433 (1225)
+.++-+++..+.+ ..-+..|. .++.+-.|.+.
T Consensus 1239 ~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~ 1273 (1431)
T KOG1240|consen 1239 APIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNME 1273 (1431)
T ss_pred CCcceEEeeccCCCCceEEEecccCCCceeeeecc
Confidence 4456677766654 44455555 56666666554
No 167
>KOG2919|consensus
Probab=32.46 E-value=3.2e+02 Score=32.16 Aligned_cols=171 Identities=19% Similarity=0.225 Sum_probs=93.8
Q ss_pred EEEEEECCCCcEEEEEECC-CCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeC-CcEE-----EEE
Q psy7977 1006 NLLIIDQNTFEILHAHQLF-PGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDD-GKLQ-----QIA 1078 (1225)
Q Consensus 1006 ~irlvdp~t~~~i~~~eL~-~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~-~kL~-----lv~ 1078 (1225)
-|++.|.-|.+--.+|..- .-+.+++..++.|..+++..++ |= +-.|++|+... |+-. +-+
T Consensus 134 PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfa-Gy-----------krcirvFdt~RpGr~c~vy~t~~~ 201 (406)
T KOG2919|consen 134 PIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFA-GY-----------KRCIRVFDTSRPGRDCPVYTTVTK 201 (406)
T ss_pred ceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEee-cc-----------cceEEEeeccCCCCCCcchhhhhc
Confidence 4889999888877777543 2245566666778877655444 52 34788998864 3211 111
Q ss_pred -EEEecCc--eeeeccccCeEEE--EeCCEEEEEEcCCCceeeeeecccceeEEEEEE--EEC----------CEEEEee
Q psy7977 1079 -EKEIKGA--CYSMCEFNGKLLA--SINSTVRLFEWTNEKELRLECSHFNNIIALFLK--VKG----------DFILVGD 1141 (1225)
Q Consensus 1079 -~~ev~G~--v~al~~f~G~LLa--~vg~~l~vy~l~~~~~L~~e~~~~~~~i~~~l~--~~g----------~~IlvGD 1141 (1225)
|.-.+|. ++|+.+.+-+++| +-|+.+=||.+.+...|.....+-+ - ++.|. -.| +.|++=|
T Consensus 202 ~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~g-G-vThL~~~edGn~lfsGaRk~dkIl~WD 279 (406)
T KOG2919|consen 202 GKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGG-G-VTHLQWCEDGNKLFSGARKDDKILCWD 279 (406)
T ss_pred ccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCC-C-eeeEEeccCcCeecccccCCCeEEEEe
Confidence 3344664 4455566665554 4789999999987776653332222 2 24443 123 4566666
Q ss_pred ccccEEEEEEecCCCeEEEEeccCCCceeEEEEeeeCCcEEEEcCCCcEEEEEeCC
Q psy7977 1142 LMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQKDS 1197 (1225)
Q Consensus 1142 ~~kSv~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~dt~l~aD~~gNl~vl~~~~ 1197 (1225)
+.+|...+ +.|.---.|++.|=---.+. +..-++++|.+|-+.|.+...
T Consensus 280 iR~~~~pv------~~L~rhv~~TNQRI~FDld~-~~~~LasG~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 280 IRYSRDPV------YALERHVGDTNQRILFDLDP-KGEILASGDTDGSVRVWDLKD 328 (406)
T ss_pred ehhccchh------hhhhhhccCccceEEEecCC-CCceeeccCCCccEEEEecCC
Confidence 66655332 11211122333332111110 112356778888888877643
No 168
>KOG0771|consensus
Probab=31.78 E-value=5.7e+02 Score=31.00 Aligned_cols=175 Identities=17% Similarity=0.226 Sum_probs=100.5
Q ss_pred eEEEEEEE-CCCCcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEe
Q psy7977 1004 VHNLLIID-QNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEI 1082 (1225)
Q Consensus 1004 ~s~irlvd-p~t~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev 1082 (1225)
.+++|+++ |..... |++-++=-++.-..|..+.+-..-||+- . ..||++.++ ..+-.+++.
T Consensus 165 dg~lRv~~~Ps~~t~-----l~e~~~~~eV~DL~FS~dgk~lasig~d----------~--~~VW~~~~g-~~~a~~t~~ 226 (398)
T KOG0771|consen 165 DGTLRVWEWPSMLTI-----LEEIAHHAEVKDLDFSPDGKFLASIGAD----------S--ARVWSVNTG-AALARKTPF 226 (398)
T ss_pred cceEEEEecCcchhh-----hhhHhhcCccccceeCCCCcEEEEecCC----------c--eEEEEeccC-chhhhcCCc
Confidence 47999999 764443 2323333456666777666555556641 2 247777764 111122211
Q ss_pred -cCceeeeccc--c----CeEEEEe---CCEEEEEEcC---CCceeeeeeccc-ceeEEEEEEE--ECCEEEEeeccccE
Q psy7977 1083 -KGACYSMCEF--N----GKLLASI---NSTVRLFEWT---NEKELRLECSHF-NNIIALFLKV--KGDFILVGDLMRSL 1146 (1225)
Q Consensus 1083 -~G~v~al~~f--~----G~LLa~v---g~~l~vy~l~---~~~~L~~e~~~~-~~~i~~~l~~--~g~~IlvGD~~kSv 1146 (1225)
+.-.++.|-| . +.+||++ +..++.|++. +++-|+....-. ... +.++++ .|.++.+|-+--||
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~s-iSsl~VS~dGkf~AlGT~dGsV 305 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKS-ISSLAVSDDGKFLALGTMDGSV 305 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCc-ceeEEEcCCCcEEEEeccCCcE
Confidence 2233444444 1 2334442 2345555443 223344111111 112 244544 68999999997777
Q ss_pred EEEEEecCCCeEEEEeccCCCceeEEEEeeeCCcE---EEEcCCCcEEEEEeCCCC
Q psy7977 1147 TLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELF---LGAENSYNLFICQKDSAA 1199 (1225)
Q Consensus 1147 ~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~dt~---l~aD~~gNl~vl~~~~~~ 1199 (1225)
.+ |+...-++..+.+-.+-..||+++|+++.++ +.+|..-++..+..|...
T Consensus 306 ai--~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~vd~~~ 359 (398)
T KOG0771|consen 306 AI--YDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAVDKTM 359 (398)
T ss_pred EE--EEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEeecccc
Confidence 66 5666788999999999999999999998744 455666666666665443
No 169
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=31.22 E-value=6.2e+02 Score=26.29 Aligned_cols=62 Identities=18% Similarity=0.208 Sum_probs=40.9
Q ss_pred CEEEE-EECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCC
Q psy7977 317 NQVLC-ATGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS 389 (1225)
Q Consensus 317 ~~VlV-asgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~ 389 (1225)
..+|+ .+...|..+++++. .++-.+++++-+.|+.+..+.+ ...++++||- +++|+=|+-..
T Consensus 64 ~D~LliGt~t~llaYDV~~N--~d~Fyke~~DGvn~i~~g~~~~-------~~~~l~ivGG--ncsi~Gfd~~G 126 (136)
T PF14781_consen 64 RDCLLIGTQTSLLAYDVENN--SDLFYKEVPDGVNAIVIGKLGD-------IPSPLVIVGG--NCSIQGFDYEG 126 (136)
T ss_pred cCEEEEeccceEEEEEcccC--chhhhhhCccceeEEEEEecCC-------CCCcEEEECc--eEEEEEeCCCC
Confidence 44444 48888988888753 2234466778889998887643 2467788875 46666666543
No 170
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=31.11 E-value=1.1e+03 Score=29.24 Aligned_cols=65 Identities=17% Similarity=0.202 Sum_probs=39.8
Q ss_pred ceeeeEEEEEEECCCCcEEEEEECCCCCc-----eEEEEEEEe---cCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeC
Q psy7977 1000 MEVEVHNLLIIDQNTFEILHAHQLFPGEY-----ALSLISSKF---GEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDD 1071 (1225)
Q Consensus 1000 ~~~~~s~irlvdp~t~~~i~~~eL~~nE~-----~~si~~v~~---~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~ 1071 (1225)
+..+.+.|--+|..|.+.+.++++..... ..+...... ......++++|+ ..|+++.++..+
T Consensus 251 ~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~----------~~G~l~ald~~t 320 (488)
T cd00216 251 DNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAP----------KNGFFYVLDRTT 320 (488)
T ss_pred CCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEEC----------CCceEEEEECCC
Confidence 34466789999999999999998764321 111111111 122234666665 258888888877
Q ss_pred CcE
Q psy7977 1072 GKL 1074 (1225)
Q Consensus 1072 ~kL 1074 (1225)
|++
T Consensus 321 G~~ 323 (488)
T cd00216 321 GKL 323 (488)
T ss_pred CcE
Confidence 643
No 171
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=31.06 E-value=1.6e+02 Score=32.79 Aligned_cols=72 Identities=18% Similarity=0.229 Sum_probs=0.0
Q ss_pred EEEEEecCceeeeccc--cCeEEEEeCCEEEEEEcCCCce-ee-eeeccc--------ceeEEEEEEEECCEEEEeeccc
Q psy7977 1077 IAEKEIKGACYSMCEF--NGKLLASINSTVRLFEWTNEKE-LR-LECSHF--------NNIIALFLKVKGDFILVGDLMR 1144 (1225)
Q Consensus 1077 v~~~ev~G~v~al~~f--~G~LLa~vg~~l~vy~l~~~~~-L~-~e~~~~--------~~~i~~~l~~~g~~IlvGD~~k 1144 (1225)
+-+-+++-+|.+++.. .|.||+|.++++.+|.+..... .. ....+| ..+.+..+.-.+++|.+-+-.+
T Consensus 128 iiElPl~~~p~ciaCC~~tG~LlVg~~~~l~lf~l~~~~~~~~~~~~lDFe~~l~~~~~~~~p~~v~ic~~yiA~~s~~e 207 (215)
T PF14761_consen 128 IIELPLSEPPLCIACCPVTGNLLVGCGNKLVLFTLKYQTIQSEKFSFLDFERSLIDHIDNFKPTQVAICEGYIAVMSDLE 207 (215)
T ss_pred EEEecCCCCCCEEEecCCCCCEEEEcCCEEEEEEEEEEEEecccccEEechhhhhheecCceEEEEEEEeeEEEEecCCE
Q ss_pred cEEE
Q psy7977 1145 SLTL 1148 (1225)
Q Consensus 1145 Sv~~ 1148 (1225)
-..|
T Consensus 208 v~Vl 211 (215)
T PF14761_consen 208 VLVL 211 (215)
T ss_pred EEEE
No 172
>KOG3679|consensus
Probab=30.91 E-value=1e+02 Score=36.17 Aligned_cols=105 Identities=12% Similarity=0.036 Sum_probs=63.8
Q ss_pred eeecCccceEEEEeeC-CceEEEEecCCcEEEEEcCCeeEEeecccccccccccCCC--CCCCCeEEEEeCCeEEEEEEc
Q psy7977 445 VTLGTQPTVLKTFRSL-STTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNHMCSLNA--ESYPDSLALATDSTFTFGTID 521 (1225)
Q Consensus 445 ~~LG~~pV~L~~~~~~-g~~~Vfa~sdrP~liyss~g~l~~~pl~~~~v~~~s~F~s--e~~p~glv~vs~~~LrI~~i~ 521 (1225)
..+|.+...++-+..+ ..+.||+.|+|.+++...+|.++|..--.-.-+++-|+++ +.--+.++...+|.|.|.+=-
T Consensus 194 lnigeqaldicivsfnqsassvfvlgernffclkdngqirfmkrldwspscflpycsvsegtintlignhnnmlhiyqdv 273 (802)
T KOG3679|consen 194 LNIGEQALDICIVSFNQSASSVFVLGERNFFCLKDNGQIRFMKRLDWSPSCFLPYCSVSEGTINTLIGNHNNMLHIYQDV 273 (802)
T ss_pred eccChhhheEEEEEeccccceEEEEeccceEEEccCCEEEEeeccCCCcccccccccccccchhhhhcCCCceEEeeeeh
Confidence 3456677666655433 4578999999999999999999987644444556777765 333356666677788877632
Q ss_pred CCCCeeeEEEeCCCcccEEEEecCCCEEE
Q psy7977 522 EIQKLHIRTVPLGEAPRRIAYQESSQTFG 550 (1225)
Q Consensus 522 ~~~~l~ir~IpLg~TprrIay~p~s~~~v 550 (1225)
. -+|..+--.+.-.+|-=+.|.-.+..+
T Consensus 274 t-lkwatqlphipvavrvgclhdlkgviv 301 (802)
T KOG3679|consen 274 T-LKWATQLPHIPVAVRVGCLHDLKGVIV 301 (802)
T ss_pred h-hhhhhcCCCCceEEEeeecccccceEE
Confidence 2 244433222223333334454444333
No 173
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=30.53 E-value=5.7e+02 Score=25.64 Aligned_cols=87 Identities=13% Similarity=0.139 Sum_probs=55.8
Q ss_pred ccCcEEEEecCCcceeeeecCCCCCcEEEEEecCCEEEEE-ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCC
Q psy7977 283 TPSAAILISTESKARVSSWEPPNGKSISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEE 361 (1225)
Q Consensus 283 T~~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n~~~VlVa-sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~ 361 (1225)
....||+++.+ ..+.+....+ +.+..+.....+.+-+ .+|++-.++-.. .+=+..-.+++.|++...+..+
T Consensus 23 ~D~~IRvf~~~--e~~~Ei~e~~-~v~~L~~~~~~~F~Y~l~NGTVGvY~~~~----RlWRiKSK~~~~~~~~~D~~gd- 94 (111)
T PF14783_consen 23 DDFEIRVFKGD--EIVAEITETD-KVTSLCSLGGGRFAYALANGTVGVYDRSQ----RLWRIKSKNQVTSMAFYDINGD- 94 (111)
T ss_pred CCcEEEEEeCC--cEEEEEeccc-ceEEEEEcCCCEEEEEecCCEEEEEeCcc----eeeeeccCCCeEEEEEEcCCCC-
Confidence 35679999988 5778877543 4466677777777766 899998886431 1111222356889998876421
Q ss_pred CCCccccCcEEEEEEecCCeEEE
Q psy7977 362 TSSEPAKAQLAAVGLWTDISARL 384 (1225)
Q Consensus 362 ~~~~~~~s~~laVG~w~d~tv~I 384 (1225)
...-+++| |.+|.|.+
T Consensus 95 ------G~~eLI~G-wsnGkve~ 110 (111)
T PF14783_consen 95 ------GVPELIVG-WSNGKVEV 110 (111)
T ss_pred ------CceEEEEE-ecCCeEEe
Confidence 23446666 55998764
No 174
>KOG0302|consensus
Probab=30.29 E-value=6.1e+02 Score=30.56 Aligned_cols=130 Identities=15% Similarity=0.198 Sum_probs=72.8
Q ss_pred ccccCeEEEEeeCCCeEEEEccCcEEEEecCCcc---eeeeecCCCCCcEEEEEecCCEEEEE---ECCeEEEEEeeccc
Q psy7977 263 TSDQQTFYCGNVDPRTVLQVTPSAAILISTESKA---RVSSWEPPNGKSISVVSCNKNQVLCA---TGCDVYYLEVHGSE 336 (1225)
Q Consensus 263 ~~~~~TL~ag~l~~~~iVQVT~~~IRli~~~~~~---~i~eW~~p~g~~Iv~As~n~~~VlVa---sgg~Lv~feid~~~ 336 (1225)
..++.++++..-.+ ..||+.|..+++ .+.. +. .+.-|..-+.|...=+|| ++|.+.+..+..-+
T Consensus 266 SptE~~vfaScS~D--------gsIrIWDiRs~~~~~~~~~-kA-h~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~ 335 (440)
T KOG0302|consen 266 SPTEDGVFASCSCD--------GSIRIWDIRSGPKKAAVST-KA-HNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFK 335 (440)
T ss_pred CCccCceEEeeecC--------ceEEEEEecCCCccceeEe-ec-cCCceeeEEccCCcceeeecCCCceEEEEEhhhcc
Confidence 34556666665433 456666654431 1111 11 223466777776665665 45777766654321
Q ss_pred e-eEEeeec-cCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCC---CcceEEeecCCC-CCCcccEEEE
Q psy7977 337 I-KQLAHRA-LEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLP---SLEEVCKEPLGG-EIIPRSILMT 410 (1225)
Q Consensus 337 L-~ev~~~~-l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~---~Le~v~~~~L~~-~~~P~SIll~ 410 (1225)
. ..+.... -...|+|+.-.|. ....++++.. |+.|.||.|. +-+..-.++..+ .-+|..++++
T Consensus 336 ~~~pVA~fk~Hk~pItsieW~p~----------e~s~iaasg~-D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFV 404 (440)
T KOG0302|consen 336 SGQPVATFKYHKAPITSIEWHPH----------EDSVIAASGE-DNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFV 404 (440)
T ss_pred CCCcceeEEeccCCeeEEEeccc----------cCceEEeccC-CCcEEEEEeeccCChhhhccccccchhcCCceeEEE
Confidence 1 1222222 2467899998774 2445677765 9999999984 333333333321 3578899998
Q ss_pred eeC
Q psy7977 411 CFE 413 (1225)
Q Consensus 411 ~l~ 413 (1225)
-+|
T Consensus 405 HqG 407 (440)
T KOG0302|consen 405 HQG 407 (440)
T ss_pred ecc
Confidence 876
No 175
>KOG1408|consensus
Probab=30.14 E-value=4.9e+02 Score=33.70 Aligned_cols=67 Identities=22% Similarity=0.277 Sum_probs=44.8
Q ss_pred cCcEEEEEEecCCeEEEEeCCCcceEEe----ecCCC-----------------CCCcccEEEEeeCCeeEEEEEECCCc
Q psy7977 368 KAQLAAVGLWTDISARLLSLPSLEEVCK----EPLGG-----------------EIIPRSILMTCFEGHCYLLVALGDGS 426 (1225)
Q Consensus 368 ~s~~laVG~w~d~tv~IlsL~~Le~v~~----~~L~~-----------------~~~P~SIll~~l~~~~~LlVGl~nG~ 426 (1225)
.++++++||. +|.|++|+-.+|+-+.+ .+|+. ...|..|++.--+....|-|-..|-.
T Consensus 269 s~r~I~cgCa-~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhS 347 (1080)
T KOG1408|consen 269 SSRLIACGCA-KGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHS 347 (1080)
T ss_pred ecceEEEeec-cceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCce
Confidence 3679999998 99999998776543321 12211 12355565543335678999999999
Q ss_pred EEEEEEcCC
Q psy7977 427 MFYFSLDPA 435 (1225)
Q Consensus 427 L~~y~ld~~ 435 (1225)
|+.+.+...
T Consensus 348 lYvWDvrD~ 356 (1080)
T KOG1408|consen 348 LYVWDVRDV 356 (1080)
T ss_pred EEEEecccc
Confidence 988887643
No 176
>KOG0290|consensus
Probab=29.99 E-value=7.4e+02 Score=28.97 Aligned_cols=148 Identities=15% Similarity=0.192 Sum_probs=83.9
Q ss_pred CCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEE--EecCceeeeccc------cCeEEEEeCCEEEEEEcC
Q psy7977 1039 EDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEK--EIKGACYSMCEF------NGKLLASINSTVRLFEWT 1110 (1225)
Q Consensus 1039 ~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~--ev~G~v~al~~f------~G~LLa~vg~~l~vy~l~ 1110 (1225)
.+.+.+++||+-. | -..-+|.+..+++..-+++++- +..-|++.+--. .-.|||..|..||+|+.+
T Consensus 56 ~~~~~rla~gS~~---E---e~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~D~LRlWri~ 129 (364)
T KOG0290|consen 56 PDKKFRLAVGSFI---E---EYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSSDFLRLWRIG 129 (364)
T ss_pred CCcceeEEEeeec---c---ccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhcccCeEEEEecc
Confidence 4577899999864 1 2235777777776444555543 566777776533 236999999999999998
Q ss_pred CCc-eee-------eeecccceeEEEEEE---EECCEEEEeeccccEEEEEEecC-C--CeEEEEeccCCCceeEEEEee
Q psy7977 1111 NEK-ELR-------LECSHFNNIIALFLK---VKGDFILVGDLMRSLTLLQYKTM-E--GSFEEISRDYNPNWMTSIEIL 1176 (1225)
Q Consensus 1111 ~~~-~L~-------~e~~~~~~~i~~~l~---~~g~~IlvGD~~kSv~~l~y~~~-~--~~L~~~arD~~~~wvta~~~L 1176 (1225)
.+. .+. ..++.|..-+ ++.+ +.-++|.+.-+=...++..-... . -+-.++|-| ..|.-++|+
T Consensus 130 ~ee~~~~~~~~L~~~kns~~~aPl-TSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHD---KEV~DIaf~ 205 (364)
T KOG0290|consen 130 DEESRVELQSVLNNNKNSEFCAPL-TSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHD---KEVYDIAFL 205 (364)
T ss_pred CcCCceehhhhhccCcccccCCcc-cccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecC---cceeEEEec
Confidence 532 121 2233333221 2222 12244444433333333222221 0 133445554 467777887
Q ss_pred eC--CcEEEEcCCCcEEEEEeC
Q psy7977 1177 DD--ELFLGAENSYNLFICQKD 1196 (1225)
Q Consensus 1177 d~--dt~l~aD~~gNl~vl~~~ 1196 (1225)
-. +.|+..-.+|.++++.+-
T Consensus 206 ~~s~~~FASvgaDGSvRmFDLR 227 (364)
T KOG0290|consen 206 KGSRDVFASVGADGSVRMFDLR 227 (364)
T ss_pred cCccceEEEecCCCcEEEEEec
Confidence 63 357777777888887663
No 177
>KOG1538|consensus
Probab=29.89 E-value=5.4e+02 Score=33.10 Aligned_cols=112 Identities=19% Similarity=0.269 Sum_probs=62.8
Q ss_pred EEEEEe-cCCEEEE-E-ECCeEEEEEeeccceeEEeeec-cCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEE
Q psy7977 309 ISVVSC-NKNQVLC-A-TGCDVYYLEVHGSEIKQLAHRA-LEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARL 384 (1225)
Q Consensus 309 Iv~As~-n~~~VlV-a-sgg~Lv~feid~~~L~ev~~~~-l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~I 384 (1225)
+.+||- ||.|.++ . .+|+|.+=.-....-..+++.. -.+.|-.++.++.. +. .+.+.++|.-| +.|+..
T Consensus 135 ~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~s-g~-----G~~di~aV~DW-~qTLSF 207 (1081)
T KOG1538|consen 135 IICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSS-GE-----GRNDILAVADW-GQTLSF 207 (1081)
T ss_pred EEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCC-CC-----CccceEEEEec-cceeEE
Confidence 444444 4555554 3 6777754321100111122211 13456677776642 11 35789999999 999999
Q ss_pred EeCCCcceEE-eecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEE
Q psy7977 385 LSLPSLEEVC-KEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSL 432 (1225)
Q Consensus 385 lsL~~Le~v~-~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~l 432 (1225)
|+|+.- .+- ...|. .-|. |+..+..+.|+++|=.+|.|-.|.=
T Consensus 208 y~LsG~-~Igk~r~L~--FdP~--CisYf~NGEy~LiGGsdk~L~~fTR 251 (1081)
T KOG1538|consen 208 YQLSGK-QIGKDRALN--FDPC--CISYFTNGEYILLGGSDKQLSLFTR 251 (1081)
T ss_pred EEecce-eecccccCC--CCch--hheeccCCcEEEEccCCCceEEEee
Confidence 999752 222 22442 3453 3344445678889988888888763
No 178
>PHA03098 kelch-like protein; Provisional
Probab=29.34 E-value=6e+02 Score=31.70 Aligned_cols=153 Identities=11% Similarity=0.092 Sum_probs=75.9
Q ss_pred CeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEecCceeeeccccCeEEEEeC-------CEEEEEEcCCCce
Q psy7977 1042 NTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASIN-------STVRLFEWTNEKE 1114 (1225)
Q Consensus 1042 ~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev~G~v~al~~f~G~LLa~vg-------~~l~vy~l~~~~~ 1114 (1225)
+..+++|-.. . .......++.|+...++...+...+..-.-.+++.++|+|.+.=| +.+..|+...++-
T Consensus 295 ~~lyv~GG~~--~--~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 370 (534)
T PHA03098 295 NVIYFIGGMN--K--NNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKW 370 (534)
T ss_pred CEEEEECCCc--C--CCCeeccEEEEeCCCCeeeECCCCCcccccceEEEECCEEEEEeCCCCCEecceEEEEcCCCCce
Confidence 3567777321 1 112234577777766555443322221122334455676654323 3466777765542
Q ss_pred eeeeecccceeEEEEEEEECCEEEE-eeccc----cEEEEEEecCCCeEEEEeccCCCceeEEEEeeeCCc-EEEEcCCC
Q psy7977 1115 LRLECSHFNNIIALFLKVKGDFILV-GDLMR----SLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDEL-FLGAENSY 1188 (1225)
Q Consensus 1115 L~~e~~~~~~~i~~~l~~~g~~Ilv-GD~~k----Sv~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~dt-~l~aD~~g 1188 (1225)
-.......+.. .....+.++.|+| |-..+ .=.+..|++..++-..++.=..+++-.++..++..- ++|+....
T Consensus 371 ~~~~~lp~~r~-~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 449 (534)
T PHA03098 371 REEPPLIFPRY-NPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGISYI 449 (534)
T ss_pred eeCCCcCcCCc-cceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEECCEEEEECCccCC
Confidence 21111111111 1222345555554 33211 134678999989888887666677666666655553 44543221
Q ss_pred c-----EEEEEeCCCC
Q psy7977 1189 N-----LFICQKDSAA 1199 (1225)
Q Consensus 1189 N-----l~vl~~~~~~ 1199 (1225)
+ -.+..|+++.
T Consensus 450 ~~~~~~~~v~~yd~~~ 465 (534)
T PHA03098 450 DNIKVYNIVESYNPVT 465 (534)
T ss_pred CCCcccceEEEecCCC
Confidence 1 1267788764
No 179
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=28.07 E-value=1.1e+02 Score=22.89 Aligned_cols=26 Identities=19% Similarity=0.148 Sum_probs=20.4
Q ss_pred ceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEe
Q psy7977 347 YEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLS 386 (1225)
Q Consensus 347 ~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~Ils 386 (1225)
.+|.|++++ ..|++|++. .+-+|||+
T Consensus 2 E~i~aia~g-------------~~~vavaTS-~~~lRifs 27 (27)
T PF12341_consen 2 EEIEAIAAG-------------DSWVAVATS-AGYLRIFS 27 (27)
T ss_pred ceEEEEEcc-------------CCEEEEEeC-CCeEEecC
Confidence 467788774 469999997 88899985
No 180
>KOG0303|consensus
Probab=27.92 E-value=1.1e+03 Score=28.60 Aligned_cols=122 Identities=16% Similarity=0.188 Sum_probs=62.5
Q ss_pred cEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEEcCCCC---ccccce---
Q psy7977 370 QLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSLDPASG---RLTDKK--- 443 (1225)
Q Consensus 370 ~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ld~~sg---~Ls~~k--- 443 (1225)
..++-.|. |..|||+.-..-+.++.. .. .-|.++.=.|-++||.++..-+...+. .|-+..
T Consensus 186 s~l~Ttck-DKkvRv~dpr~~~~v~e~-~~-----------heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~ 252 (472)
T KOG0303|consen 186 SLLCTTCK-DKKVRVIDPRRGTVVSEG-VA-----------HEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLE 252 (472)
T ss_pred ceeeeecc-cceeEEEcCCCCcEeeec-cc-----------ccCCCcceeEEeccCceeeeccccccccceeccCccccc
Confidence 44555555 999999988765555432 11 011122223445566665543332111 011111
Q ss_pred ----eeeecCccceEEEEeeCCceEEEEecCCcEEEEEcCCeeEEeeccccc--ccccccCCCCCCCCeEEEEe
Q psy7977 444 ----KVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLRQ--VNHMCSLNAESYPDSLALAT 511 (1225)
Q Consensus 444 ----~~~LG~~pV~L~~~~~~g~~~Vfa~sdrP~liyss~g~l~~~pl~~~~--v~~~s~F~se~~p~glv~vs 511 (1225)
..-|-+..--|.||-..+.+-|+.|| ...+.++|..++.++ ++++..|.+..-..|+.+.-
T Consensus 253 eP~~~~elDtSnGvl~PFyD~dt~ivYl~G-------KGD~~IRYyEit~d~P~~hyln~f~S~epQRG~g~mP 319 (472)
T KOG0303|consen 253 EPIALQELDTSNGVLLPFYDPDTSIVYLCG-------KGDSSIRYFEITNEPPFVHYLNTFSSKEPQRGMGFMP 319 (472)
T ss_pred CcceeEEeccCCceEEeeecCCCCEEEEEe-------cCCcceEEEEecCCCceeEEecccccCCccccccccc
Confidence 01112222234455444444444444 346789999998887 88999998854444554443
No 181
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=27.23 E-value=87 Score=38.26 Aligned_cols=47 Identities=23% Similarity=0.381 Sum_probs=32.8
Q ss_pred CCcEEEEEECC--CCCceEEEEEEEecCC-------CCeEEEEEeeeeCCCCCCCcceEEEEEEEe
Q psy7977 1014 TFEILHAHQLF--PGEYALSLISSKFGED-------PNTYFVLGTAVVHPEENEPKQGRIIIFHYD 1070 (1225)
Q Consensus 1014 t~~~i~~~eL~--~nE~~~si~~v~~~~~-------~~~~lvVGTa~~~~eed~~~~GrI~vf~i~ 1070 (1225)
+++....-+++ ++|.++|++++.|.+. +-.+++|||. .|+++.|.-.
T Consensus 42 ~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG~s----------sG~vrfyte~ 97 (415)
T PF14655_consen 42 TYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVGTS----------SGYVRFYTEN 97 (415)
T ss_pred eEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEEec----------ccEEEEEecc
Confidence 34455544554 4599999999999542 3489999984 6777777764
No 182
>KOG1900|consensus
Probab=26.71 E-value=3e+02 Score=37.95 Aligned_cols=102 Identities=19% Similarity=0.302 Sum_probs=63.2
Q ss_pred ceeeeecCCeEEEEEcCCCEEEEEEEeCcccCCceee--eecEEEEecccCcceeEEEecCCeEEEEeecCCeEEEEEee
Q psy7977 72 GSLWNGWSERYLLGDLAGRLFMLLLEKEEKMDGTFSV--KEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNR 149 (1225)
Q Consensus 72 ~~ifv~~~~~~LL~~e~G~Ly~l~l~~d~~~~Gr~~V--s~i~i~~~~tis~~SsL~~L~~g~LFvGS~~GDS~L~~i~~ 149 (1225)
|-+|+..-...|+.-.-=+++++.+..+....+. ++ .+++|. .+.+ --+|+++-++|.+|.|.+.| .||++.-
T Consensus 132 pgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~-~~f~~~~~i~-~dg~-~V~~I~~t~nGRIF~~G~dg--~lyEl~Y 206 (1311)
T KOG1900|consen 132 PGVFVPEIQHLLVVATPVEIVILGVSFDEFTGEL-SIFNTSFKIS-VDGV-SVNCITYTENGRIFFAGRDG--NLYELVY 206 (1311)
T ss_pred CCcchhhhheeEEecccceEEEEEEEeccccCcc-cccccceeee-cCCc-eEEEEEeccCCcEEEeecCC--CEEEEEE
Confidence 6688865555666666778888888876432221 21 111111 1111 23788889999999999988 8888877
Q ss_pred CCCCCC------------Cc-eEEEeeeeccc-----cceeeEEeec
Q psy7977 150 SPDENG------------TY-VSVMESFTNLA-----PIIDMVVVDL 178 (1225)
Q Consensus 150 ~~ddd~------------~~-l~v~d~l~Nlg-----PI~D~~v~d~ 178 (1225)
...+.- +. -.++-+++++. ||.-+++.+.
T Consensus 207 q~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~S 253 (1311)
T KOG1900|consen 207 QAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNS 253 (1311)
T ss_pred eccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEeccc
Confidence 543321 00 12334567776 9999998764
No 183
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=26.57 E-value=1.2e+03 Score=28.05 Aligned_cols=60 Identities=10% Similarity=0.084 Sum_probs=39.3
Q ss_pred CcEEEEEEe---------cCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEE-EEEcC
Q psy7977 369 AQLAAVGLW---------TDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFY-FSLDP 434 (1225)
Q Consensus 369 s~~laVG~w---------~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~-y~ld~ 434 (1225)
.+.+.|+.. .+..|.+|.+.+++.+....++ .-|+-.. +..+..+.-..||..+. +++++
T Consensus 57 g~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p--~~p~~~~----~~~~~~~~ls~dgk~l~V~n~~p 126 (352)
T TIGR02658 57 GSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELP--EGPRFLV----GTYPWMTSLTPDNKTLLFYQFSP 126 (352)
T ss_pred CCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccC--CCchhhc----cCccceEEECCCCCEEEEecCCC
Confidence 346677766 6889999999999988877775 3344221 12456677777776443 55554
No 184
>KOG3621|consensus
Probab=26.36 E-value=5.8e+02 Score=33.01 Aligned_cols=177 Identities=13% Similarity=0.112 Sum_probs=90.5
Q ss_pred EccCcEEEEecCCc---ceeeeecCCCCCcEEEEEec-CCEEEEE--ECCeEEEEEeecc---ceeEEeeecc--CceeE
Q psy7977 282 VTPSAAILISTESK---ARVSSWEPPNGKSISVVSCN-KNQVLCA--TGCDVYYLEVHGS---EIKQLAHRAL--EYEVA 350 (1225)
Q Consensus 282 VT~~~IRli~~~~~---~~i~eW~~p~g~~Iv~As~n-~~~VlVa--sgg~Lv~feid~~---~L~ev~~~~l--~~eIS 350 (1225)
+....+.++....+ .+-.+|. . ..|+..+++ ..+++.+ .++.+..|++... .+..+.+.+- ...|+
T Consensus 52 sS~G~lyl~~R~~~~~~~~~~~~~--~-~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVT 128 (726)
T KOG3621|consen 52 SSAGSVYLYNRHTGEMRKLKNEGA--T-GITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVT 128 (726)
T ss_pred cccceEEEEecCchhhhcccccCc--c-ceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEE
Confidence 33455666665542 3345562 2 234444444 3444444 6788999988653 3444444443 67899
Q ss_pred EEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCC-cceEE-eecCCCCCCcccEEEEeeC-CeeEEEEEECCCcE
Q psy7977 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPS-LEEVC-KEPLGGEIIPRSILMTCFE-GHCYLLVALGDGSM 427 (1225)
Q Consensus 351 cLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~-Le~v~-~~~L~~~~~P~SIll~~l~-~~~~LlVGl~nG~L 427 (1225)
||+-++- ..-+..|-. .|.|....|+. ..-.+ .|.+- ..+.+| +++. -.-||+|.+---.+
T Consensus 129 al~Ws~~-----------~~k~ysGD~-~Gkv~~~~L~s~~~~~~~~q~il--~~ds~I--VQlD~~q~~LLVStl~r~~ 192 (726)
T KOG3621|consen 129 ALEWSKN-----------GMKLYSGDS-QGKVVLTELDSRQAFLSKSQEIL--SEDSEI--VQLDYLQSYLLVSTLTRCI 192 (726)
T ss_pred EEEeccc-----------ccEEeecCC-CceEEEEEechhhhhccccceee--ccCcce--EEeecccceehHhhhhhhh
Confidence 9998652 345777776 88888888865 11111 12221 233344 3333 23466666543333
Q ss_pred EEEEEcCCCCccccceeeeecCccceEEEEeeCCceEEEEec---CCcEEEEEcCCeeEEeeccc
Q psy7977 428 FYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACS---DRPTVIYSSNHKLVFSNVNL 489 (1225)
Q Consensus 428 ~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~~g~~~Vfa~s---drP~liyss~g~l~~~pl~~ 489 (1225)
+.+. +. .+.+.+|++|-+= ....-+.|..| ..+-.||..+-..+++..+.
T Consensus 193 Lc~t-E~-------eti~QIG~k~R~~----~~~~GACF~~g~~~~q~~~IycaRPG~RlWead~ 245 (726)
T KOG3621|consen 193 LCQT-EA-------ETITQIGKKPRKS----LIDFGACFFPGQCKAQKPQIYCARPGLRLWEADF 245 (726)
T ss_pred eeec-ch-------hHHHHhcCCCcCC----ccccceEEeeccccCCCceEEEecCCCceEEeec
Confidence 3221 11 1235577777541 00122455554 34455555555555665544
No 185
>KOG0640|consensus
Probab=26.23 E-value=1.2e+02 Score=35.12 Aligned_cols=74 Identities=20% Similarity=0.271 Sum_probs=48.3
Q ss_pred CceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCc--ceEEeecCCCCCCcccEEEEeeCCeeEEEEEEC
Q psy7977 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSL--EEVCKEPLGGEIIPRSILMTCFEGHCYLLVALG 423 (1225)
Q Consensus 346 ~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~L--e~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~ 423 (1225)
-.+|+||++-| +..+++-|.. |++|.+|.+..- +.-+. -+......++|.+.. ++.||++|+.
T Consensus 172 ~devn~l~FHP-----------re~ILiS~sr-D~tvKlFDfsK~saKrA~K-~~qd~~~vrsiSfHP--sGefllvgTd 236 (430)
T KOG0640|consen 172 VDEVNDLDFHP-----------RETILISGSR-DNTVKLFDFSKTSAKRAFK-VFQDTEPVRSISFHP--SGEFLLVGTD 236 (430)
T ss_pred cCcccceeecc-----------hhheEEeccC-CCeEEEEecccHHHHHHHH-HhhccceeeeEeecC--CCceEEEecC
Confidence 36788888765 4667777776 999999998531 11110 011011225665553 4689999999
Q ss_pred CCcEEEEEEcC
Q psy7977 424 DGSMFYFSLDP 434 (1225)
Q Consensus 424 nG~L~~y~ld~ 434 (1225)
.-.+-.|.++.
T Consensus 237 Hp~~rlYdv~T 247 (430)
T KOG0640|consen 237 HPTLRLYDVNT 247 (430)
T ss_pred CCceeEEeccc
Confidence 99999998763
No 186
>KOG0286|consensus
Probab=26.08 E-value=1.1e+03 Score=27.61 Aligned_cols=231 Identities=17% Similarity=0.176 Sum_probs=114.5
Q ss_pred EEEccCcEEEEecCCccee-eeecCCCCCcEEEEEecCCEEEE-E-ECCeEEEEEeeccceeEEeeeccC-ceeEEEEec
Q psy7977 280 LQVTPSAAILISTESKARV-SSWEPPNGKSISVVSCNKNQVLC-A-TGCDVYYLEVHGSEIKQLAHRALE-YEVACLDIS 355 (1225)
Q Consensus 280 VQVT~~~IRli~~~~~~~i-~eW~~p~g~~Iv~As~n~~~VlV-a-sgg~Lv~feid~~~L~ev~~~~l~-~eIScLai~ 355 (1225)
+|+-++ |.+.+...++. -.|.+ +.+.|++||-.+..|+= + +.+.... .+|+ .+|-..|.+
T Consensus 43 i~~~~r--r~LkGH~~Ki~~~~ws~-Dsr~ivSaSqDGklIvWDs~TtnK~ha-------------ipl~s~WVMtCA~s 106 (343)
T KOG0286|consen 43 IQMRTR--RTLKGHLNKIYAMDWST-DSRRIVSASQDGKLIVWDSFTTNKVHA-------------IPLPSSWVMTCAYS 106 (343)
T ss_pred eeeeeE--EEecccccceeeeEecC-CcCeEEeeccCCeEEEEEcccccceeE-------------EecCceeEEEEEEC
Confidence 444444 66666554443 45765 45678887765543332 1 2333322 3333 466666666
Q ss_pred cCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCc--c---eEEeecCCC-CCCcccEEEEeeCCeeEEEEEECCCcEEE
Q psy7977 356 PLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSL--E---EVCKEPLGG-EIIPRSILMTCFEGHCYLLVALGDGSMFY 429 (1225)
Q Consensus 356 ~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~L--e---~v~~~~L~~-~~~P~SIll~~l~~~~~LlVGl~nG~L~~ 429 (1225)
| .++++|-|.- |+...||+|..- + .+.. .|++ ...-+...+. ...+|+-|.+|....-
T Consensus 107 P-----------Sg~~VAcGGL-dN~Csiy~ls~~d~~g~~~v~r-~l~gHtgylScC~f~---dD~~ilT~SGD~TCal 170 (343)
T KOG0286|consen 107 P-----------SGNFVACGGL-DNKCSIYPLSTRDAEGNVRVSR-ELAGHTGYLSCCRFL---DDNHILTGSGDMTCAL 170 (343)
T ss_pred C-----------CCCeEEecCc-CceeEEEecccccccccceeee-eecCccceeEEEEEc---CCCceEecCCCceEEE
Confidence 5 2678888887 999999999632 2 1221 2221 1111222222 2445555544444444
Q ss_pred EEEcCCCCccccceeeeecCccceEEEEeeCC-ceEEEEec--CCcEEEEEc--CCeeEEeecccccccccccCCCCCCC
Q psy7977 430 FSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS-TTNVFACS--DRPTVIYSS--NHKLVFSNVNLRQVNHMCSLNAESYP 504 (1225)
Q Consensus 430 y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~~g-~~~Vfa~s--drP~liyss--~g~l~~~pl~~~~v~~~s~F~se~~p 504 (1225)
+ |-++|+.. ..|-|-.. ....+.... ....|+.| |+...++.. ..-.+..+-...++++++=| |
T Consensus 171 W--Die~g~~~---~~f~GH~g-DV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ff-----P 239 (343)
T KOG0286|consen 171 W--DIETGQQT---QVFHGHTG-DVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFF-----P 239 (343)
T ss_pred E--EcccceEE---EEecCCcc-cEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEc-----c
Confidence 4 44445321 12223211 111111111 23344443 444333321 12233344444455555444 6
Q ss_pred CeEEEEeC---CeEEEEEEcCCCCeee-EEEeCCCcccEEEEecCCCEEEEEE
Q psy7977 505 DSLALATD---STFTFGTIDEIQKLHI-RTVPLGEAPRRIAYQESSQTFGVIT 553 (1225)
Q Consensus 505 ~glv~vs~---~~LrI~~i~~~~~l~i-r~IpLg~TprrIay~p~s~~~vV~t 553 (1225)
+|..++++ ...|+..|-..+.+.+ .+=+...-...++|+...+.+..+.
T Consensus 240 ~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy 292 (343)
T KOG0286|consen 240 SGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGY 292 (343)
T ss_pred CCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeee
Confidence 67666654 4777777765554332 2334455678899999888888876
No 187
>KOG1188|consensus
Probab=25.64 E-value=3.9e+02 Score=31.70 Aligned_cols=134 Identities=19% Similarity=0.282 Sum_probs=76.4
Q ss_pred cceEEEEEEEeCCcEEEEEEEEecCceeeeccc--------cCeEEEEeCCEEEEEEcCCCceee-eeecccc--eeEEE
Q psy7977 1060 KQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEF--------NGKLLASINSTVRLFEWTNEKELR-LECSHFN--NIIAL 1128 (1225)
Q Consensus 1060 ~~GrI~vf~i~~~kL~lv~~~ev~G~v~al~~f--------~G~LLa~vg~~l~vy~l~~~~~L~-~e~~~~~--~~i~~ 1128 (1225)
+.|.|.+|+...+++ + .+.+|++..+..+ ++-+.++.-.+||+||+....... -.....+ .++..
T Consensus 48 Sngsv~lyd~~tg~~--l--~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~l 123 (376)
T KOG1188|consen 48 SNGSVRLYDKGTGQL--L--EEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICL 123 (376)
T ss_pred cCCeEEEEeccchhh--h--heecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEe
Confidence 467777787664311 1 2344444443322 233445566799999997543221 1222233 33344
Q ss_pred EEEEECCEEEEee----ccccEEEEEEecCCCeEEEEeccCCCceeEEEEeeeCC--cEEEEcCCCcEEEEEeCCC
Q psy7977 1129 FLKVKGDFILVGD----LMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDE--LFLGAENSYNLFICQKDSA 1198 (1225)
Q Consensus 1129 ~l~~~g~~IlvGD----~~kSv~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~d--t~l~aD~~gNl~vl~~~~~ 1198 (1225)
.+.+.++.|..|- .+.+|.|.-.+. ..|+.-.=-|.+.-.||.+.|-..+ -++.+--+|=+-++....+
T Consensus 124 d~nck~~ii~~GtE~~~s~A~v~lwDvR~-~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 124 DLNCKKNIIACGTELTRSDASVVLWDVRS-EQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD 198 (376)
T ss_pred eccCcCCeEEeccccccCceEEEEEEecc-ccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence 4545777777773 334454544443 2333333346677789999999766 6888888887666666554
No 188
>KOG4441|consensus
Probab=25.06 E-value=1.5e+03 Score=28.87 Aligned_cols=184 Identities=10% Similarity=0.104 Sum_probs=101.0
Q ss_pred eEEEEEEECCCCcEEEEEECCCCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEE--------
Q psy7977 1004 VHNLLIIDQNTFEILHAHQLFPGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQ-------- 1075 (1225)
Q Consensus 1004 ~s~irlvdp~t~~~i~~~eL~~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~-------- 1075 (1225)
...++..||.+.+-...-.+...-.-.++++ + +...+|||--.. ....--.+..|+...++..
T Consensus 300 ~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~--~---~~~lYv~GG~~~----~~~~l~~ve~YD~~~~~W~~~a~M~~~ 370 (571)
T KOG4441|consen 300 LRSVECYDPKTNEWSSLAPMPSPRCRVGVAV--L---NGKLYVVGGYDS----GSDRLSSVERYDPRTNQWTPVAPMNTK 370 (571)
T ss_pred cceeEEecCCcCcEeecCCCCcccccccEEE--E---CCEEEEEccccC----CCcccceEEEecCCCCceeccCCccCc
Confidence 4578899998764444444443333333332 2 236777773211 1122334455555433222
Q ss_pred --EEEEEEecCceeeeccccCeEEEEeCCEEEEEEcCCCceeeeeecccceeEEEEEEEECCEEEE--e-eccc--cEEE
Q psy7977 1076 --QIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWTNEKELRLECSHFNNIIALFLKVKGDFILV--G-DLMR--SLTL 1148 (1225)
Q Consensus 1076 --lv~~~ev~G~v~al~~f~G~LLa~vg~~l~vy~l~~~~~L~~e~~~~~~~i~~~l~~~g~~Ilv--G-D~~k--Sv~~ 1148 (1225)
...-..+.|.+||+.+++|.= --+++-.|+-..++-=.+.....+.. ..-+.+.+++|++ | |... --++
T Consensus 371 R~~~~v~~l~g~iYavGG~dg~~---~l~svE~YDp~~~~W~~va~m~~~r~-~~gv~~~~g~iYi~GG~~~~~~~l~sv 446 (571)
T KOG4441|consen 371 RSDFGVAVLDGKLYAVGGFDGEK---SLNSVECYDPVTNKWTPVAPMLTRRS-GHGVAVLGGKLYIIGGGDGSSNCLNSV 446 (571)
T ss_pred cccceeEEECCEEEEEecccccc---ccccEEEecCCCCcccccCCCCccee-eeEEEEECCEEEEEcCcCCCccccceE
Confidence 233355667777777776421 11367788877665211111111111 2233344554433 2 2222 1345
Q ss_pred EEEecCCCeEEEEeccCCCceeEEEEeeeCCcEEEEcCCCc-E--EEEEeCCCCC
Q psy7977 1149 LQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYN-L--FICQKDSAAT 1200 (1225)
Q Consensus 1149 l~y~~~~~~L~~~arD~~~~wvta~~~Ld~dt~l~aD~~gN-l--~vl~~~~~~~ 1200 (1225)
-.|++..++=..++.=..+|.-..+..+++.-|+++.-++. . -|-+|+|+..
T Consensus 447 e~YDP~t~~W~~~~~M~~~R~~~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~ 501 (571)
T KOG4441|consen 447 ECYDPETNTWTLIAPMNTRRSGFGVAVLNGKIYVVGGFDGTSALSSVERYDPETN 501 (571)
T ss_pred EEEcCCCCceeecCCcccccccceEEEECCEEEEECCccCCCccceEEEEcCCCC
Confidence 67999999999999999999999999999886666655552 1 2677888753
No 189
>KOG3621|consensus
Probab=25.03 E-value=6.1e+02 Score=32.83 Aligned_cols=197 Identities=11% Similarity=0.092 Sum_probs=100.6
Q ss_pred cEEEEEecCCEEEEE-ECCeEEEEEeeccceeEEeeeccC-ceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEE
Q psy7977 308 SISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALE-YEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLL 385 (1225)
Q Consensus 308 ~Iv~As~n~~~VlVa-sgg~Lv~feid~~~L~ev~~~~l~-~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~Il 385 (1225)
.-++-++++.|+++. +-|.+++|.=..+....+ +-+-. ..++.+.+++ ...++|+|+- .|.|.++
T Consensus 37 ~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~-~~~~~~~~~~~~~vs~-----------~e~lvAagt~-~g~V~v~ 103 (726)
T KOG3621|consen 37 KLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKL-KNEGATGITCVRSVSS-----------VEYLVAAGTA-SGRVSVF 103 (726)
T ss_pred EEEEeecCCceEEEecccceEEEEecCchhhhcc-cccCccceEEEEEecc-----------hhHhhhhhcC-CceEEee
Confidence 467788889999998 778887775322211111 11112 2223333433 2456777775 9999999
Q ss_pred eCCC-c--ceEEeecCCCCCCcccEEEEeeC-CeeEEEEEECCCcEEEEEEcCCCCccccceeeeecCccceEEEEeeCC
Q psy7977 386 SLPS-L--EEVCKEPLGGEIIPRSILMTCFE-GHCYLLVALGDGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLS 461 (1225)
Q Consensus 386 sL~~-L--e~v~~~~L~~~~~P~SIll~~l~-~~~~LlVGl~nG~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~~g 461 (1225)
.+.. + ..++....+ ..-+..|.-.... +...|+.|-.-|.+...+++.. .+...+...+=.-+-.++.+..-.
T Consensus 104 ql~~~~p~~~~~~t~~d-~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~--~~~~~~~q~il~~ds~IVQlD~~q 180 (726)
T KOG3621|consen 104 QLNKELPRDLDYVTPCD-KSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSR--QAFLSKSQEILSEDSEIVQLDYLQ 180 (726)
T ss_pred hhhccCCCcceeecccc-ccCCceEEEEEecccccEEeecCCCceEEEEEechh--hhhccccceeeccCcceEEeeccc
Confidence 8853 1 122222222 1124444444443 5678999999999999998862 111111111111111122222222
Q ss_pred ceEEEEecCCcEEEEEcCCeeEEeecccccccc----cccCCCCCC--CCeEEEEeCCeEEEEEEcC
Q psy7977 462 TTNVFACSDRPTVIYSSNHKLVFSNVNLRQVNH----MCSLNAESY--PDSLALATDSTFTFGTIDE 522 (1225)
Q Consensus 462 ~~~Vfa~sdrP~liyss~g~l~~~pl~~~~v~~----~s~F~se~~--p~glv~vs~~~LrI~~i~~ 522 (1225)
..-..+++.|..+++...+. |..+.-++-.+ .+-|--..| ...++|+.-=++|+=..+-
T Consensus 181 ~~LLVStl~r~~Lc~tE~et--i~QIG~k~R~~~~~~GACF~~g~~~~q~~~IycaRPG~RlWead~ 245 (726)
T KOG3621|consen 181 SYLLVSTLTRCILCQTEAET--ITQIGKKPRKSLIDFGACFFPGQCKAQKPQIYCARPGLRLWEADF 245 (726)
T ss_pred ceehHhhhhhhheeecchhH--HHHhcCCCcCCccccceEEeeccccCCCceEEEecCCCceEEeec
Confidence 22334456677788775544 33443333222 333333334 4567777665666655543
No 190
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=24.91 E-value=2.4e+02 Score=21.78 Aligned_cols=39 Identities=10% Similarity=0.096 Sum_probs=29.2
Q ss_pred CcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEE
Q psy7977 369 AQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILM 409 (1225)
Q Consensus 369 s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll 409 (1225)
.+++.|..|.+++|.++++.+++.+....++ .-|+.+++
T Consensus 3 ~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg--~~P~~i~~ 41 (42)
T TIGR02276 3 GTKLYVTNSGSNTVSVIDTATNKVIATIPVG--GYPFGVAV 41 (42)
T ss_pred CCEEEEEeCCCCEEEEEECCCCeEEEEEECC--CCCceEEe
Confidence 3578899988999999999877776665553 56776654
No 191
>KOG0645|consensus
Probab=24.80 E-value=1.1e+03 Score=27.27 Aligned_cols=70 Identities=20% Similarity=0.220 Sum_probs=50.9
Q ss_pred CcEEEEEe--cCCEEEEEE-CCeEEEEEeeccceeEEeeec-cCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeE
Q psy7977 307 KSISVVSC--NKNQVLCAT-GCDVYYLEVHGSEIKQLAHRA-LEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISA 382 (1225)
Q Consensus 307 ~~Iv~As~--n~~~VlVas-gg~Lv~feid~~~L~ev~~~~-l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv 382 (1225)
++|...+. .+++++.++ +++.++++-..++++.+...+ -++||-|++.+. ...+||-+.. |.+|
T Consensus 62 rsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~-----------sG~~LATCSR-DKSV 129 (312)
T KOG0645|consen 62 RSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSA-----------SGNYLATCSR-DKSV 129 (312)
T ss_pred heeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcC-----------CCCEEEEeeC-CCeE
Confidence 45665555 456666663 778877776556777776655 478999999875 2568888876 9999
Q ss_pred EEEeCC
Q psy7977 383 RLLSLP 388 (1225)
Q Consensus 383 ~IlsL~ 388 (1225)
=|+...
T Consensus 130 WiWe~d 135 (312)
T KOG0645|consen 130 WIWEID 135 (312)
T ss_pred EEEEec
Confidence 999986
No 192
>KOG0288|consensus
Probab=24.60 E-value=9.2e+02 Score=29.43 Aligned_cols=91 Identities=16% Similarity=0.160 Sum_probs=52.8
Q ss_pred CcEEEEecCCcceeeeecCCCCCcEEEEEec--CCEEEEE-ECCeEEEEEeeccceeEEee---eccCceeEEEEeccCC
Q psy7977 285 SAAILISTESKARVSSWEPPNGKSISVVSCN--KNQVLCA-TGCDVYYLEVHGSEIKQLAH---RALEYEVACLDISPLS 358 (1225)
Q Consensus 285 ~~IRli~~~~~~~i~eW~~p~g~~Iv~As~n--~~~VlVa-sgg~Lv~feid~~~L~ev~~---~~l~~eIScLai~~~~ 358 (1225)
+.||.+|.-+.....+. |.|..|++-+.+ +..|+.+ -+..+-.+.+...++...-+ ....+.++..-++|
T Consensus 322 kkvRfwD~Rs~~~~~sv--~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSp-- 397 (459)
T KOG0288|consen 322 KKVRFWDIRSADKTRSV--PLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSP-- 397 (459)
T ss_pred cceEEEeccCCceeeEe--ecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECC--
Confidence 44777775543444443 445578877765 3344444 35556555544333433221 12244455444443
Q ss_pred CCCCCCccccCcEEEEEEecCCeEEEEeCCC
Q psy7977 359 NEETSSEPAKAQLAAVGLWTDISARLLSLPS 389 (1225)
Q Consensus 359 ~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~ 389 (1225)
...|+|.|.- ||+|+||++.+
T Consensus 398 ---------d~~YvaAGS~-dgsv~iW~v~t 418 (459)
T KOG0288|consen 398 ---------DGSYVAAGSA-DGSVYIWSVFT 418 (459)
T ss_pred ---------CCceeeeccC-CCcEEEEEccC
Confidence 3679999987 99999999975
No 193
>KOG0276|consensus
Probab=24.21 E-value=1.6e+03 Score=28.90 Aligned_cols=60 Identities=17% Similarity=0.144 Sum_probs=42.8
Q ss_pred EEEEEcCCCEEEEEEEeCcccCCceeeeecEEEEecccCcceeEEEecCCeEEEEeecCCeEEEEEeeC
Q psy7977 82 YLLGDLAGRLFMLLLEKEEKMDGTFSVKEPKVELLGEISIPECLTYLDNGVVFVGSRLGDSQLVKLNRS 150 (1225)
Q Consensus 82 ~LL~~e~G~Ly~l~l~~d~~~~Gr~~Vs~i~i~~~~tis~~SsL~~L~~g~LFvGS~~GDS~L~~i~~~ 150 (1225)
+|.+.-+|++..-.-+.. ..|+++.+. ..|+-+|-.+-+.+-+.+||..+.=.+|.+...
T Consensus 28 ~la~LynG~V~IWnyetq------tmVksfeV~---~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ 87 (794)
T KOG0276|consen 28 ILAALYNGDVQIWNYETQ------TMVKSFEVS---EVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTG 87 (794)
T ss_pred EEEeeecCeeEEEecccc------eeeeeeeec---ccchhhheeeeccceEEEecCCceEEEEecccc
Confidence 777788899876554432 257777664 356667777778899999999888777777653
No 194
>PRK01742 tolB translocation protein TolB; Provisional
Probab=23.93 E-value=1.1e+03 Score=28.72 Aligned_cols=130 Identities=12% Similarity=0.035 Sum_probs=68.4
Q ss_pred ceEEEEEEEeCCcEEEEEEEEecCceeeecc-ccCeEEEEeC-----CEEEEEEcCCCc--eeeeeecccceeEEEEEEE
Q psy7977 1061 QGRIIIFHYDDGKLQQIAEKEIKGACYSMCE-FNGKLLASIN-----STVRLFEWTNEK--ELRLECSHFNNIIALFLKV 1132 (1225)
Q Consensus 1061 ~GrI~vf~i~~~kL~lv~~~ev~G~v~al~~-f~G~LLa~vg-----~~l~vy~l~~~~--~L~~e~~~~~~~i~~~l~~ 1132 (1225)
.++|++++.+....+.+.. -++.+.+.+- -+|+.||-+. ..|++|++...+ .+.. .... .. ......
T Consensus 183 ~~~i~i~d~dg~~~~~lt~--~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~-~~g~-~~-~~~wSP 257 (429)
T PRK01742 183 PYEVRVADYDGFNQFIVNR--SSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVAS-FRGH-NG-APAFSP 257 (429)
T ss_pred eEEEEEECCCCCCceEecc--CCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEec-CCCc-cC-ceeECC
Confidence 4788888876544444432 2344554441 2676665442 368999986433 2221 1111 11 122334
Q ss_pred ECCEEEEe-eccccEEEEEEecCCCeEEEEeccCCCceeEEEEeeeCCc--EEEEcCCCcEEEEEeCC
Q psy7977 1133 KGDFILVG-DLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDEL--FLGAENSYNLFICQKDS 1197 (1225)
Q Consensus 1133 ~g~~IlvG-D~~kSv~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~dt--~l~aD~~gNl~vl~~~~ 1197 (1225)
.|++|+++ +--....+..++.+.+++..+.... ...++..+-+++. +.++|..|+..++.++.
T Consensus 258 DG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~--~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~ 323 (429)
T PRK01742 258 DGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGA--GNNTEPSWSPDGQSILFTSDRSGSPQVYRMSA 323 (429)
T ss_pred CCCEEEEEEecCCcEEEEEEECCCCCeEeeccCC--CCcCCEEECCCCCEEEEEECCCCCceEEEEEC
Confidence 56666654 3333455666776555555554422 2344555555554 44678788777777654
No 195
>KOG1517|consensus
Probab=23.56 E-value=1.8e+03 Score=30.35 Aligned_cols=178 Identities=14% Similarity=0.151 Sum_probs=110.0
Q ss_pred eEEEEEEECCCCcEEEEEECC--CCCceEEEEEEEecCCCCeEEEEEeeeeCCCCCCCcceEEEEEEEeC---CcEEEEE
Q psy7977 1004 VHNLLIIDQNTFEILHAHQLF--PGEYALSLISSKFGEDPNTYFVLGTAVVHPEENEPKQGRIIIFHYDD---GKLQQIA 1078 (1225)
Q Consensus 1004 ~s~irlvdp~t~~~i~~~eL~--~nE~~~si~~v~~~~~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~---~kL~lv~ 1078 (1225)
+..|++.|-...+.+..|... +.-.+..|+.+ +.....++.+|+. -|-|.+|+=-. +|.|++.
T Consensus 1085 r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~li--Ne~D~aLlLtas~----------dGvIRIwk~y~~~~~~~eLVT 1152 (1387)
T KOG1517|consen 1085 RERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELI--NEQDDALLLTASS----------DGVIRIWKDYADKWKKPELVT 1152 (1387)
T ss_pred cceEEEEecccCceeccccCCCCCCCccceeeee--cccchhheeeecc----------CceEEEecccccccCCceeEE
Confidence 456888887777777777653 23455555432 3345577777763 56777776542 3566665
Q ss_pred E-EE---------ecCceeeeccccCeEEEEe-CCEEEEEEcCCCceee---eeecccceeEEEEEE---EECCEEEEee
Q psy7977 1079 E-KE---------IKGACYSMCEFNGKLLASI-NSTVRLFEWTNEKELR---LECSHFNNIIALFLK---VKGDFILVGD 1141 (1225)
Q Consensus 1079 ~-~e---------v~G~v~al~~f~G~LLa~v-g~~l~vy~l~~~~~L~---~e~~~~~~~i~~~l~---~~g~~IlvGD 1141 (1225)
. .. --|.|+.-.+.+|+|+++= -..|||||..+++..+ .+.... ++.+. ..||.|++|=
T Consensus 1153 aw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~----vTaLS~~~~~gn~i~AGf 1228 (1387)
T KOG1517|consen 1153 AWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTL----VTALSADLVHGNIIAAGF 1228 (1387)
T ss_pred eeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCcc----ceeecccccCCceEEEee
Confidence 3 11 1235555555679998865 4789999998877655 222222 34444 3479999987
Q ss_pred ccccEEEEEEec-CCCeEEEEeccCCCce-eEEEEeee--CCcEEEEcCCCcEEEEEeCC
Q psy7977 1142 LMRSLTLLQYKT-MEGSFEEISRDYNPNW-MTSIEILD--DELFLGAENSYNLFICQKDS 1197 (1225)
Q Consensus 1142 ~~kSv~~l~y~~-~~~~L~~~arD~~~~w-vta~~~Ld--~dt~l~aD~~gNl~vl~~~~ 1197 (1225)
+=-|+-++--+- .+..++-.-|-++... +..+.+=- .+.++.+-.+|.+.++..--
T Consensus 1229 aDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~ 1288 (1387)
T KOG1517|consen 1229 ADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRM 1288 (1387)
T ss_pred cCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEeccc
Confidence 777777753332 2345666666655431 55555443 23688889999998877654
No 196
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=23.11 E-value=8.3e+02 Score=31.67 Aligned_cols=112 Identities=13% Similarity=0.117 Sum_probs=62.3
Q ss_pred EEEEEecCCEEEEE-ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeC
Q psy7977 309 ISVVSCNKNQVLCA-TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSL 387 (1225)
Q Consensus 309 Iv~As~n~~~VlVa-sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL 387 (1225)
-.++|..+.-.+|- ++.++.+.+...+.|+--+..+-...|-.|+-...+++ ..+++||+ .+.|.+|+-
T Consensus 34 li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~--------qsiLaVGf--~~~v~l~~Q 103 (631)
T PF12234_consen 34 LISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDG--------QSILAVGF--PHHVLLYTQ 103 (631)
T ss_pred eEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCC--------CEEEEEEc--CcEEEEEEc
Confidence 34444444444444 56778888776555443334444677778887766543 57899998 578888764
Q ss_pred C---------CcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEE
Q psy7977 388 P---------SLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFS 431 (1225)
Q Consensus 388 ~---------~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~ 431 (1225)
. ....+-...+. +..|+.|-=.-..+.-+|+||.+|...+..+
T Consensus 104 ~R~dy~~~~p~w~~i~~i~i~-~~T~h~Igds~Wl~~G~LvV~sGNqlfv~dk 155 (631)
T PF12234_consen 104 LRYDYTNKGPSWAPIRKIDIS-SHTPHPIGDSIWLKDGTLVVGSGNQLFVFDK 155 (631)
T ss_pred cchhhhcCCcccceeEEEEee-cCCCCCccceeEecCCeEEEEeCCEEEEECC
Confidence 2 11122111221 1222222111112456799999888776644
No 197
>KOG1587|consensus
Probab=22.43 E-value=1.7e+03 Score=28.47 Aligned_cols=233 Identities=12% Similarity=0.058 Sum_probs=105.7
Q ss_pred cEEEEEec--CCEEEEE--ECCeEEEEEeecccee---EEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCC
Q psy7977 308 SISVVSCN--KNQVLCA--TGCDVYYLEVHGSEIK---QLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDI 380 (1225)
Q Consensus 308 ~Iv~As~n--~~~VlVa--sgg~Lv~feid~~~L~---ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~ 380 (1225)
.|+++..+ ++++++. .+|++++..+...... ......-.+..+|.++.=+.+. ...+ ++.+.. ||
T Consensus 244 ~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~------~~~~-f~s~ss-DG 315 (555)
T KOG1587|consen 244 EVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNE------HNTE-FFSLSS-DG 315 (555)
T ss_pred ceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccC------CCCc-eEEEec-CC
Confidence 46777666 6677775 5899988877644221 1111222334445444322111 1122 334443 99
Q ss_pred eEEEEeCCCcce-EEe---ecCC---C-CCCcccEEEEeeC--CeeEEEEEECCCcEEE-EEEcCCCCc-cccce--eee
Q psy7977 381 SARLLSLPSLEE-VCK---EPLG---G-EIIPRSILMTCFE--GHCYLLVALGDGSMFY-FSLDPASGR-LTDKK--KVT 446 (1225)
Q Consensus 381 tv~IlsL~~Le~-v~~---~~L~---~-~~~P~SIll~~l~--~~~~LlVGl~nG~L~~-y~ld~~sg~-Ls~~k--~~~ 446 (1225)
.|..+++..+.. +-. +... . ..-........+. .....+||+..|.+++ ++-+...+. ..... ...
T Consensus 316 ~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~ 395 (555)
T KOG1587|consen 316 SICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFI 395 (555)
T ss_pred cEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCccccccccccccccc
Confidence 999997765432 111 1110 0 0111112222332 3456889999999998 443322111 11111 112
Q ss_pred ecCccceEEEEeeCCceEEEEecCCcEEEEEcCCeeEEeeccc-----ccccccccCCCCCCCCeEEEEe-CCeEEEEEE
Q psy7977 447 LGTQPTVLKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL-----RQVNHMCSLNAESYPDSLALAT-DSTFTFGTI 520 (1225)
Q Consensus 447 LG~~pV~L~~~~~~g~~~Vfa~sdrP~liyss~g~l~~~pl~~-----~~v~~~s~F~se~~p~glv~vs-~~~LrI~~i 520 (1225)
.|.-||.-.....-+....+.+||=---|++.. ....|+.. +.+.. ..+ |+.-|--|+.++ .+.|-|-.+
T Consensus 396 ~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~--~~~~Pl~~~~~~~~~v~~-vaW-SptrpavF~~~d~~G~l~iWDL 471 (555)
T KOG1587|consen 396 THIGPVYAVSRNPFYPKNFLSVGDWTVRIWSED--VIASPLLSLDSSPDYVTD-VAW-SPTRPAVFATVDGDGNLDIWDL 471 (555)
T ss_pred ccCcceEeeecCCCccceeeeeccceeEecccc--CCCCcchhhhhccceeee-eEE-cCcCceEEEEEcCCCceehhhh
Confidence 233333322111112233444453222333311 11122110 10111 111 122333455555 467777777
Q ss_pred cCCCCeeeEEEeCCCcccEEEE-ecCCCEEEEE
Q psy7977 521 DEIQKLHIRTVPLGEAPRRIAY-QESSQTFGVI 552 (1225)
Q Consensus 521 ~~~~~l~ir~IpLg~TprrIay-~p~s~~~vV~ 552 (1225)
-....=++.+++++..+-..+. ++..+.++++
T Consensus 472 l~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavG 504 (555)
T KOG1587|consen 472 LQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVG 504 (555)
T ss_pred hccccCCcccccccccccceeecCCCCcEEEEe
Confidence 6666667778888765554444 4446666666
No 198
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=22.36 E-value=2.9e+02 Score=21.34 Aligned_cols=29 Identities=31% Similarity=0.456 Sum_probs=22.1
Q ss_pred CeEEEEEEcCCCCeeeEEEeCCCcccEEEEe
Q psy7977 513 STFTFGTIDEIQKLHIRTVPLGEAPRRIAYQ 543 (1225)
Q Consensus 513 ~~LrI~~i~~~~~l~ir~IpLg~TprrIay~ 543 (1225)
+++.+ ++.......+++++|+.|+.|+++
T Consensus 14 ~~v~~--id~~~~~~~~~i~vg~~P~~i~~~ 42 (42)
T TIGR02276 14 NTVSV--IDTATNKVIATIPVGGYPFGVAVS 42 (42)
T ss_pred CEEEE--EECCCCeEEEEEECCCCCceEEeC
Confidence 45554 555566788899999999999874
No 199
>PHA02790 Kelch-like protein; Provisional
Probab=22.26 E-value=1.4e+03 Score=28.19 Aligned_cols=150 Identities=13% Similarity=0.079 Sum_probs=0.0
Q ss_pred CCeEEEEEeeeeCCCCCCCcceEEEEEEEeCCcEEEEEEEEecCceeeeccccCeEEEEeC----CEEEEEEcCCCceee
Q psy7977 1041 PNTYFVLGTAVVHPEENEPKQGRIIIFHYDDGKLQQIAEKEIKGACYSMCEFNGKLLASIN----STVRLFEWTNEKELR 1116 (1225)
Q Consensus 1041 ~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~~kL~lv~~~ev~G~v~al~~f~G~LLa~vg----~~l~vy~l~~~~~L~ 1116 (1225)
++.++++| |.++....-.+..|+...++...+..-...-.-.+++..+|+|-+.=| +.+..|+...++...
T Consensus 271 ~~~lyviG-----G~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~~~~~iYviGG~~~~~sve~ydp~~n~W~~ 345 (480)
T PHA02790 271 GEVVYLIG-----GWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVPANNKLYVVGGLPNPTSVERWFHGDAAWVN 345 (480)
T ss_pred CCEEEEEc-----CCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEEECCEEEEECCcCCCCceEEEECCCCeEEE
Q ss_pred eeecccceeEEEEEEEECCEEEE--eeccccEEEEEEecCCCeEEEEeccCCCceeEEEEeeeCCcEEEEcCCCcEEEEE
Q psy7977 1117 LECSHFNNIIALFLKVKGDFILV--GDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEILDDELFLGAENSYNLFICQ 1194 (1225)
Q Consensus 1117 ~e~~~~~~~i~~~l~~~g~~Ilv--GD~~kSv~~l~y~~~~~~L~~~arD~~~~wvta~~~Ld~dt~l~aD~~gNl~vl~ 1194 (1225)
......+.. .....+.+++|+| |---..-++-.|+++.++-...+.=..||+-.++..++..-|+.+ |+ +..
T Consensus 346 ~~~l~~~r~-~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~G---G~--~e~ 419 (480)
T PHA02790 346 MPSLLKPRC-NPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVG---RN--AEF 419 (480)
T ss_pred CCCCCCCCc-ccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEEC---Cc--eEE
Q ss_pred eCCCCCC
Q psy7977 1195 KDSAATS 1201 (1225)
Q Consensus 1195 ~~~~~~~ 1201 (1225)
|+|+..+
T Consensus 420 ydp~~~~ 426 (480)
T PHA02790 420 YCESSNT 426 (480)
T ss_pred ecCCCCc
No 200
>KOG1063|consensus
Probab=21.79 E-value=7.7e+02 Score=31.90 Aligned_cols=64 Identities=13% Similarity=0.140 Sum_probs=39.0
Q ss_pred CcEEEEEEecCCeEEEEeCCCc--ceEEe---ecCCCCCCcccEEEEeeC-CeeEEEEEECCCcEEEEEEc
Q psy7977 369 AQLAAVGLWTDISARLLSLPSL--EEVCK---EPLGGEIIPRSILMTCFE-GHCYLLVALGDGSMFYFSLD 433 (1225)
Q Consensus 369 s~~laVG~w~d~tv~IlsL~~L--e~v~~---~~L~~~~~P~SIll~~l~-~~~~LlVGl~nG~L~~y~ld 433 (1225)
+.+++-+.. |.+|.+|..++. ..+.. .+++....|.+.+-.... ....+-+||+.|.++.|+..
T Consensus 630 e~~FaTaSR-DK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 630 EKYFATASR-DKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred cceeEEecC-CceEEEEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence 455666665 999999999876 32322 122211223333322222 23467899999999999876
No 201
>KOG0264|consensus
Probab=20.94 E-value=1e+03 Score=29.23 Aligned_cols=126 Identities=18% Similarity=0.190 Sum_probs=0.0
Q ss_pred CceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeC--CeeEEEEEEC
Q psy7977 346 EYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFE--GHCYLLVALG 423 (1225)
Q Consensus 346 ~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~--~~~~LlVGl~ 423 (1225)
+.++.|+++.+. ....+|-|.. |++|.+|.|.+|.. ....+ ...-.++.-++.. ....|-.+-.
T Consensus 272 ~~~vn~~~fnp~----------~~~ilAT~S~-D~tV~LwDlRnL~~-~lh~~--e~H~dev~~V~WSPh~etvLASSg~ 337 (422)
T KOG0264|consen 272 SAEVNCVAFNPF----------NEFILATGSA-DKTVALWDLRNLNK-PLHTF--EGHEDEVFQVEWSPHNETVLASSGT 337 (422)
T ss_pred CCceeEEEeCCC----------CCceEEeccC-CCcEEEeechhccc-Cceec--cCCCcceEEEEeCCCCCceeEeccc
Q ss_pred CCcEEEEEEcCCCCccccceeeeecCccceEEEEeeCCceEEEEec---CCcEEEEE--cCCeeEEeecc
Q psy7977 424 DGSMFYFSLDPASGRLTDKKKVTLGTQPTVLKTFRSLSTTNVFACS---DRPTVIYS--SNHKLVFSNVN 488 (1225)
Q Consensus 424 nG~L~~y~ld~~sg~Ls~~k~~~LG~~pV~L~~~~~~g~~~Vfa~s---drP~liys--s~g~l~~~pl~ 488 (1225)
||.|..+.++....+-+ ...--..|+.|.-...+-...|-=.+ .+||.|-+ ..+.++++...
T Consensus 338 D~rl~vWDls~ig~eq~---~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 338 DRRLNVWDLSRIGEEQS---PEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CCcEEEEeccccccccC---hhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
No 202
>KOG0639|consensus
Probab=20.45 E-value=7.2e+02 Score=31.00 Aligned_cols=100 Identities=13% Similarity=0.127 Sum_probs=57.7
Q ss_pred CCEEEEE--ECCeEEEEEeeccceeEEeeeccCceeEEEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceE
Q psy7977 316 KNQVLCA--TGCDVYYLEVHGSEIKQLAHRALEYEVACLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEV 393 (1225)
Q Consensus 316 ~~~VlVa--sgg~Lv~feid~~~L~ev~~~~l~~eIScLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v 393 (1225)
|..|+++ ++|.|.+.++.+..+...- .--.+-++||++++. ..-+.-|.- |++||-|.|..-.++
T Consensus 520 DakvcFsccsdGnI~vwDLhnq~~Vrqf-qGhtDGascIdis~d-----------GtklWTGGl-DntvRcWDlregrql 586 (705)
T KOG0639|consen 520 DAKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGASCIDISKD-----------GTKLWTGGL-DNTVRCWDLREGRQL 586 (705)
T ss_pred ccceeeeeccCCcEEEEEcccceeeecc-cCCCCCceeEEecCC-----------CceeecCCC-ccceeehhhhhhhhh
Confidence 5667775 7888888877643332211 112456899999753 223555665 889999999753333
Q ss_pred EeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEEEE
Q psy7977 394 CKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYFSL 432 (1225)
Q Consensus 394 ~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y~l 432 (1225)
....+.. -.=|+- .-....+|.|||.|+.+-....
T Consensus 587 qqhdF~S--QIfSLg--~cP~~dWlavGMens~vevlh~ 621 (705)
T KOG0639|consen 587 QQHDFSS--QIFSLG--YCPTGDWLAVGMENSNVEVLHT 621 (705)
T ss_pred hhhhhhh--hheecc--cCCCccceeeecccCcEEEEec
Confidence 2222210 000110 0114679999999999866543
No 203
>KOG0649|consensus
Probab=20.03 E-value=1.3e+03 Score=26.40 Aligned_cols=142 Identities=18% Similarity=0.320 Sum_probs=85.1
Q ss_pred CCCeEEEEEeeeeCCCCCCCcceEEEEEEEeC---------CcEEEEEEEEecCceeeeccccCeEEEEeCCEEEEEEcC
Q psy7977 1040 DPNTYFVLGTAVVHPEENEPKQGRIIIFHYDD---------GKLQQIAEKEIKGACYSMCEFNGKLLASINSTVRLFEWT 1110 (1225)
Q Consensus 1040 ~~~~~lvVGTa~~~~eed~~~~GrI~vf~i~~---------~kL~lv~~~ev~G~v~al~~f~G~LLa~vg~~l~vy~l~ 1110 (1225)
..+.|+++|.. -|-|-+|++.+ +|++.+.+.--+|++|.|.-....||.|--..|+=|.|.
T Consensus 20 p~~~~l~agn~----------~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d~~Lls~gdG~V~gw~W~ 89 (325)
T KOG0649|consen 20 PSKQYLFAGNL----------FGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHDDFLLSGGDGLVYGWEWN 89 (325)
T ss_pred CcceEEEEecC----------CCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeehhheeeccCceEEEeeeh
Confidence 35578888853 46778888863 589999887789999999976777776655677777775
Q ss_pred CCc-------eee------eeecccceeEEEEEEEEC-CEEEEeeccccEEEEEEecCCCeEEEEeccCCCceeEEEEee
Q psy7977 1111 NEK-------ELR------LECSHFNNIIALFLKVKG-DFILVGDLMRSLTLLQYKTMEGSFEEISRDYNPNWMTSIEIL 1176 (1225)
Q Consensus 1111 ~~~-------~L~------~e~~~~~~~i~~~l~~~g-~~IlvGD~~kSv~~l~y~~~~~~L~~~arD~~~~wvta~~~L 1176 (1225)
+.. +++ ......|.+-++.++... ..+++| =.++ ...++-+.+++...-|-+. -++-++.-=
T Consensus 90 E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~Ag--GD~~-~y~~dlE~G~i~r~~rGHt-DYvH~vv~R 165 (325)
T KOG0649|consen 90 EEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAG--GDGV-IYQVDLEDGRIQREYRGHT-DYVHSVVGR 165 (325)
T ss_pred hhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEec--CCeE-EEEEEecCCEEEEEEcCCc-ceeeeeeec
Confidence 421 121 112334544456676443 444444 2333 5567777887776655432 122222221
Q ss_pred -eCCcEEEEcCCCcEEEEEe
Q psy7977 1177 -DDELFLGAENSYNLFICQK 1195 (1225)
Q Consensus 1177 -d~dt~l~aD~~gNl~vl~~ 1195 (1225)
....++.+-.+|...+-..
T Consensus 166 ~~~~qilsG~EDGtvRvWd~ 185 (325)
T KOG0649|consen 166 NANGQILSGAEDGTVRVWDT 185 (325)
T ss_pred ccCcceeecCCCccEEEEec
Confidence 1235777777777776554
No 204
>KOG2395|consensus
Probab=20.02 E-value=1.3e+03 Score=29.15 Aligned_cols=158 Identities=12% Similarity=0.165 Sum_probs=0.0
Q ss_pred cCcEEEEecCCcceeeeecCCCCCcEE-------EEEecCCEEEEE-ECCeEEEEEeecc---ceeEEeeecc--CceeE
Q psy7977 284 PSAAILISTESKARVSSWEPPNGKSIS-------VVSCNKNQVLCA-TGCDVYYLEVHGS---EIKQLAHRAL--EYEVA 350 (1225)
Q Consensus 284 ~~~IRli~~~~~~~i~eW~~p~g~~Iv-------~As~n~~~VlVa-sgg~Lv~feid~~---~L~ev~~~~l--~~eIS 350 (1225)
++++..+|.+.++++.+|+.....+.+ .|-..+.+-+|. ++..|+...+.-. .|.-.+.++. ...-+
T Consensus 355 ~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFs 434 (644)
T KOG2395|consen 355 QDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFS 434 (644)
T ss_pred cCcceeeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccccccc
Q ss_pred EEEeccCCCCCCCCccccCcEEEEEEecCCeEEEEeCCCcceEEeecCCCCCCcccEEEEeeCCeeEEEEEECCCcEEEE
Q psy7977 351 CLDISPLSNEETSSEPAKAQLAAVGLWTDISARLLSLPSLEEVCKEPLGGEIIPRSILMTCFEGHCYLLVALGDGSMFYF 430 (1225)
Q Consensus 351 cLai~~~~~~~~~~~~~~s~~laVG~w~d~tv~IlsL~~Le~v~~~~L~~~~~P~SIll~~l~~~~~LlVGl~nG~L~~y 430 (1225)
|.+- ..+.+++||.. +|-||+|+- +......++| ..-..|.-++.-..---++++-+-.|+..
T Consensus 435 c~aT------------T~sG~IvvgS~-~GdIRLYdr--i~~~AKTAlP--gLG~~I~hVdvtadGKwil~Tc~tyLlLi 497 (644)
T KOG2395|consen 435 CFAT------------TESGYIVVGSL-KGDIRLYDR--IGRRAKTALP--GLGDAIKHVDVTADGKWILATCKTYLLLI 497 (644)
T ss_pred eeee------------cCCceEEEeec-CCcEEeehh--hhhhhhhccc--ccCCceeeEEeeccCcEEEEecccEEEEE
Q ss_pred EEcCCCCccccc--eeeeecCccceEEEEe
Q psy7977 431 SLDPASGRLTDK--KKVTLGTQPTVLKTFR 458 (1225)
Q Consensus 431 ~ld~~sg~Ls~~--k~~~LG~~pV~L~~~~ 458 (1225)
..--.+|.-..+ ..++.|.+-++=..++
T Consensus 498 ~t~~kdg~~~~~~Gf~k~~~~k~p~pk~Lk 527 (644)
T KOG2395|consen 498 DTLIKDGDYAGKTGFEKFMGNKIPKPKRLK 527 (644)
T ss_pred EEecccCCccccccccccccccCCCceeee
Done!