Query psy7978
Match_columns 542
No_of_seqs 350 out of 2061
Neff 4.6
Searched_HMMs 29240
Date Fri Aug 16 23:42:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7978.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7978hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3do6_A Formate--tetrahydrofola 100.0 3E-165 1E-169 1302.6 27.8 374 150-542 2-543 (543)
2 3pzx_A Formate--tetrahydrofola 100.0 6E-157 2E-161 1246.2 22.4 387 136-542 2-557 (557)
3 4b4u_A Bifunctional protein fo 100.0 1.1E-40 3.7E-45 339.0 11.6 110 1-117 191-302 (303)
4 1a4i_A Methylenetetrahydrofola 100.0 1.5E-37 5.1E-42 316.1 10.4 121 1-121 177-299 (301)
5 4a26_A Putative C-1-tetrahydro 100.0 1.5E-36 5E-41 308.8 11.6 117 1-117 177-297 (300)
6 3p2o_A Bifunctional protein fo 100.0 1.9E-36 6.7E-41 306.0 10.2 111 1-117 172-284 (285)
7 1b0a_A Protein (fold bifunctio 100.0 2.2E-36 7.5E-41 305.9 10.2 114 1-120 171-286 (288)
8 4a5o_A Bifunctional protein fo 100.0 2.7E-36 9.2E-41 305.0 9.3 111 1-117 173-285 (286)
9 3ngx_A Bifunctional protein fo 100.0 1.6E-35 5.4E-40 298.1 11.0 111 1-118 162-274 (276)
10 3l07_A Bifunctional protein fo 100.0 1.8E-35 6.2E-40 298.9 10.5 109 1-116 173-283 (285)
11 2c2x_A Methylenetetrahydrofola 100.0 8.5E-34 2.9E-38 286.2 11.3 107 1-115 170-280 (281)
12 1edz_A 5,10-methylenetetrahydr 99.9 5E-23 1.7E-27 211.2 9.9 101 1-119 189-317 (320)
13 2rir_A Dipicolinate synthase, 97.4 0.00019 6.4E-09 71.6 6.1 104 1-118 168-295 (300)
14 2d5c_A AROE, shikimate 5-dehyd 97.3 0.00026 9E-09 69.0 6.5 97 1-118 127-245 (263)
15 1nyt_A Shikimate 5-dehydrogena 97.2 0.00026 8.8E-09 69.8 5.1 100 1-119 130-255 (271)
16 2egg_A AROE, shikimate 5-dehyd 97.1 0.00064 2.2E-08 68.2 6.7 97 1-118 152-279 (297)
17 1nvt_A Shikimate 5'-dehydrogen 96.7 0.0017 5.7E-08 64.4 5.5 97 1-118 139-269 (287)
18 1p77_A Shikimate 5-dehydrogena 96.7 0.00051 1.7E-08 67.8 1.7 101 1-119 130-256 (272)
19 2hk9_A Shikimate dehydrogenase 96.6 0.002 6.9E-08 63.5 5.6 96 1-118 140-258 (275)
20 3h9u_A Adenosylhomocysteinase; 96.3 0.0036 1.2E-07 66.9 5.9 59 1-59 222-298 (436)
21 3d4o_A Dipicolinate synthase s 96.2 0.0028 9.7E-08 62.9 3.9 99 1-113 166-288 (293)
22 3p2y_A Alanine dehydrogenase/p 96.0 0.0086 2.9E-07 62.9 7.0 88 23-117 258-354 (381)
23 3n58_A Adenosylhomocysteinase; 96.0 0.0048 1.6E-07 66.3 4.6 61 1-61 258-336 (464)
24 4dio_A NAD(P) transhydrogenase 95.8 0.023 7.7E-07 60.2 8.9 88 23-117 268-364 (405)
25 3gvp_A Adenosylhomocysteinase 95.5 0.0093 3.2E-07 63.7 4.6 62 1-62 231-310 (435)
26 3d64_A Adenosylhomocysteinase; 95.4 0.0098 3.4E-07 64.4 4.6 63 1-63 288-368 (494)
27 1v8b_A Adenosylhomocysteinase; 95.2 0.011 3.7E-07 63.8 3.8 63 1-63 268-348 (479)
28 3oj0_A Glutr, glutamyl-tRNA re 94.7 0.039 1.3E-06 48.4 5.5 41 22-62 72-113 (144)
29 3hdj_A Probable ornithine cycl 94.5 0.027 9.2E-07 57.1 4.6 40 23-62 176-216 (313)
30 3gvx_A Glycerate dehydrogenase 94.2 0.044 1.5E-06 55.2 5.2 62 1-62 133-212 (290)
31 1ygy_A PGDH, D-3-phosphoglycer 93.6 0.65 2.2E-05 50.1 13.4 118 1-119 153-306 (529)
32 1gdh_A D-glycerate dehydrogena 93.6 0.083 2.8E-06 53.5 6.1 105 1-106 157-299 (320)
33 3hg7_A D-isomer specific 2-hyd 93.6 0.08 2.7E-06 54.2 6.0 63 1-63 151-234 (324)
34 2g76_A 3-PGDH, D-3-phosphoglyc 93.6 0.22 7.7E-06 50.9 9.2 116 1-117 176-327 (335)
35 4g2n_A D-isomer specific 2-hyd 93.4 0.068 2.3E-06 55.1 5.2 118 1-119 184-337 (345)
36 2yq5_A D-isomer specific 2-hyd 93.3 0.07 2.4E-06 55.0 5.0 62 1-62 159-239 (343)
37 2cuk_A Glycerate dehydrogenase 93.2 0.43 1.5E-05 48.2 10.6 118 1-119 155-303 (311)
38 4e5n_A Thermostable phosphite 92.9 0.073 2.5E-06 54.4 4.4 118 1-119 156-318 (330)
39 1l7d_A Nicotinamide nucleotide 92.9 0.26 9E-06 50.8 8.5 39 24-62 251-297 (384)
40 3don_A Shikimate dehydrogenase 92.8 0.099 3.4E-06 52.3 5.1 97 1-118 128-249 (277)
41 2ekl_A D-3-phosphoglycerate de 92.7 0.11 3.8E-06 52.4 5.3 63 1-63 153-236 (313)
42 3evt_A Phosphoglycerate dehydr 92.7 0.066 2.3E-06 54.7 3.7 117 1-118 148-301 (324)
43 3pp8_A Glyoxylate/hydroxypyruv 92.6 0.094 3.2E-06 53.3 4.7 62 1-62 150-232 (315)
44 3gg9_A D-3-phosphoglycerate de 92.5 0.51 1.7E-05 48.7 10.1 118 1-119 171-326 (352)
45 1qp8_A Formate dehydrogenase; 92.5 0.13 4.5E-06 51.8 5.6 63 1-63 135-214 (303)
46 1xdw_A NAD+-dependent (R)-2-hy 92.2 0.13 4.4E-06 52.4 5.1 63 1-63 157-238 (331)
47 1wwk_A Phosphoglycerate dehydr 92.2 0.13 4.6E-06 51.7 5.2 63 1-63 153-236 (307)
48 3jtm_A Formate dehydrogenase, 92.1 0.13 4.3E-06 53.2 5.0 63 1-63 175-260 (351)
49 2pi1_A D-lactate dehydrogenase 92.1 0.14 4.7E-06 52.5 5.1 62 1-62 152-233 (334)
50 3ce6_A Adenosylhomocysteinase; 91.7 0.14 4.7E-06 55.5 4.9 62 1-62 285-364 (494)
51 1dxy_A D-2-hydroxyisocaproate 91.6 0.17 5.8E-06 51.6 5.2 63 1-63 156-237 (333)
52 1j4a_A D-LDH, D-lactate dehydr 91.6 0.17 5.7E-06 51.6 5.2 63 1-63 157-239 (333)
53 4dgs_A Dehydrogenase; structur 91.6 0.14 4.7E-06 52.8 4.5 118 1-119 182-332 (340)
54 1vl6_A Malate oxidoreductase; 91.2 0.17 5.8E-06 53.4 4.7 37 22-59 255-294 (388)
55 2j6i_A Formate dehydrogenase; 91.0 0.26 8.9E-06 50.9 5.9 63 1-63 175-261 (364)
56 1mx3_A CTBP1, C-terminal bindi 90.6 0.31 1.1E-05 50.1 6.1 118 1-119 179-335 (347)
57 1x13_A NAD(P) transhydrogenase 90.4 0.21 7.2E-06 52.2 4.7 39 24-62 249-295 (401)
58 3pwz_A Shikimate dehydrogenase 90.4 0.35 1.2E-05 48.1 6.1 100 1-119 131-256 (272)
59 1x7d_A Ornithine cyclodeaminas 90.4 0.21 7E-06 51.4 4.5 41 22-62 186-229 (350)
60 3oet_A Erythronate-4-phosphate 90.4 0.23 8E-06 52.0 5.0 117 1-118 130-282 (381)
61 3k5p_A D-3-phosphoglycerate de 90.4 0.23 8E-06 52.6 5.0 116 1-118 167-322 (416)
62 4ezb_A Uncharacterized conserv 90.0 0.17 6E-06 50.7 3.6 61 1-61 35-123 (317)
63 2dbq_A Glyoxylate reductase; D 89.9 0.3 1E-05 49.6 5.2 118 1-119 161-314 (334)
64 2w2k_A D-mandelate dehydrogena 89.8 0.31 1.1E-05 49.9 5.3 118 1-119 174-330 (348)
65 3obb_A Probable 3-hydroxyisobu 89.8 0.32 1.1E-05 48.8 5.2 62 1-62 14-100 (300)
66 3qha_A Putative oxidoreductase 89.7 0.27 9.2E-06 48.5 4.5 61 1-62 26-108 (296)
67 2qrj_A Saccharopine dehydrogen 89.6 0.36 1.2E-05 51.0 5.6 80 26-115 259-363 (394)
68 3pef_A 6-phosphogluconate dehy 89.5 0.2 6.9E-06 48.8 3.5 61 1-61 12-97 (287)
69 4hy3_A Phosphoglycerate oxidor 89.4 0.25 8.6E-06 51.4 4.3 119 1-120 187-341 (365)
70 1sc6_A PGDH, D-3-phosphoglycer 89.2 0.37 1.3E-05 50.6 5.4 63 1-63 156-237 (404)
71 2nac_A NAD-dependent formate d 89.1 0.46 1.6E-05 49.9 6.0 63 1-63 202-287 (393)
72 4dll_A 2-hydroxy-3-oxopropiona 89.1 0.29 9.9E-06 48.9 4.3 62 1-62 42-127 (320)
73 3ba1_A HPPR, hydroxyphenylpyru 88.9 0.35 1.2E-05 49.4 4.9 63 1-63 175-255 (333)
74 3doj_A AT3G25530, dehydrogenas 88.8 0.23 8E-06 49.3 3.4 61 1-61 32-117 (310)
75 3ond_A Adenosylhomocysteinase; 88.6 0.37 1.3E-05 52.2 4.9 61 1-61 276-354 (488)
76 2h78_A Hibadh, 3-hydroxyisobut 88.5 0.45 1.5E-05 46.6 5.1 61 1-61 14-99 (302)
77 2o4c_A Erythronate-4-phosphate 88.4 0.43 1.5E-05 49.9 5.2 119 1-119 127-280 (380)
78 3qsg_A NAD-binding phosphogluc 88.3 0.41 1.4E-05 47.7 4.8 61 1-61 35-119 (312)
79 3o8q_A Shikimate 5-dehydrogena 88.2 0.22 7.6E-06 49.7 2.8 100 1-119 137-262 (281)
80 3pdu_A 3-hydroxyisobutyrate de 88.2 0.26 9E-06 48.0 3.2 62 1-62 12-98 (287)
81 1pjc_A Protein (L-alanine dehy 88.0 1.3 4.5E-05 45.2 8.4 110 1-115 178-322 (361)
82 2gcg_A Glyoxylate reductase/hy 87.8 0.4 1.4E-05 48.5 4.4 63 1-63 166-250 (330)
83 4e21_A 6-phosphogluconate dehy 87.4 0.59 2E-05 48.1 5.4 61 1-62 33-118 (358)
84 2d0i_A Dehydrogenase; structur 87.3 0.52 1.8E-05 48.0 4.9 117 1-119 157-310 (333)
85 4gbj_A 6-phosphogluconate dehy 87.1 0.33 1.1E-05 48.5 3.2 62 1-62 16-100 (297)
86 3u62_A Shikimate dehydrogenase 87.1 0.41 1.4E-05 47.0 3.9 61 1-61 119-202 (253)
87 3fbt_A Chorismate mutase and s 86.9 0.42 1.4E-05 47.9 3.9 97 1-118 133-253 (282)
88 3tnl_A Shikimate dehydrogenase 86.8 0.49 1.7E-05 48.2 4.4 98 1-119 165-303 (315)
89 2vhw_A Alanine dehydrogenase; 86.7 1.8 6.1E-05 44.6 8.6 105 1-109 179-316 (377)
90 2i99_A MU-crystallin homolog; 86.5 0.61 2.1E-05 46.6 4.9 41 22-62 188-229 (312)
91 1omo_A Alanine dehydrogenase; 85.9 0.6 2E-05 47.1 4.5 40 22-62 180-220 (322)
92 3l6d_A Putative oxidoreductase 85.4 0.46 1.6E-05 47.1 3.3 62 1-62 20-104 (306)
93 3g0o_A 3-hydroxyisobutyrate de 85.3 0.28 9.6E-06 48.4 1.7 61 1-61 18-104 (303)
94 2pv7_A T-protein [includes: ch 85.3 0.67 2.3E-05 45.8 4.4 61 1-61 33-101 (298)
95 3jyo_A Quinate/shikimate dehyd 85.2 0.88 3E-05 45.4 5.2 97 2-119 139-269 (283)
96 2gf2_A Hibadh, 3-hydroxyisobut 82.6 1.1 3.8E-05 43.3 4.6 57 1-57 11-92 (296)
97 3ggo_A Prephenate dehydrogenas 81.3 0.68 2.3E-05 46.5 2.6 61 1-61 44-130 (314)
98 2cvz_A Dehydrogenase, 3-hydrox 81.0 0.89 3E-05 43.7 3.2 59 1-60 12-91 (289)
99 4a7p_A UDP-glucose dehydrogena 80.7 0.98 3.4E-05 48.0 3.7 62 1-62 19-132 (446)
100 3dtt_A NADP oxidoreductase; st 80.6 0.61 2.1E-05 44.7 1.9 59 1-60 30-125 (245)
101 3ojo_A CAP5O; rossmann fold, c 80.4 1.9 6.5E-05 45.7 5.8 62 1-62 22-132 (431)
102 4gwg_A 6-phosphogluconate dehy 79.3 1.7 5.7E-05 46.8 5.0 62 1-62 15-106 (484)
103 2a9f_A Putative malic enzyme ( 78.5 0.62 2.1E-05 49.3 1.3 40 22-63 250-292 (398)
104 2uyy_A N-PAC protein; long-cha 78.3 1.4 4.8E-05 43.3 3.7 60 1-60 41-125 (316)
105 1yb4_A Tartronic semialdehyde 78.1 2.3 7.8E-05 41.0 5.1 60 1-60 14-97 (295)
106 2eez_A Alanine dehydrogenase; 77.5 1.2 4.1E-05 45.5 3.0 61 1-61 177-268 (369)
107 1vpd_A Tartronate semialdehyde 77.4 1.8 6.2E-05 41.9 4.1 60 1-60 16-100 (299)
108 3kb6_A D-lactate dehydrogenase 77.2 2.3 8E-05 43.3 5.1 62 1-62 152-233 (334)
109 2q3e_A UDP-glucose 6-dehydroge 75.6 3.1 0.00011 43.9 5.7 40 23-62 75-134 (467)
110 3cky_A 2-hydroxymethyl glutara 75.2 1.8 6E-05 42.0 3.4 60 1-60 15-99 (301)
111 3phh_A Shikimate dehydrogenase 74.1 2.1 7E-05 42.7 3.6 96 1-118 129-247 (269)
112 3gg2_A Sugar dehydrogenase, UD 73.2 2.7 9.3E-05 44.4 4.5 61 1-61 13-124 (450)
113 2p4q_A 6-phosphogluconate dehy 73.0 2.9 0.0001 44.8 4.8 62 1-62 21-112 (497)
114 2zyd_A 6-phosphogluconate dehy 73.0 3.5 0.00012 43.9 5.3 62 1-62 26-116 (480)
115 3gt0_A Pyrroline-5-carboxylate 72.6 4.4 0.00015 38.5 5.4 56 1-57 13-95 (247)
116 1np3_A Ketol-acid reductoisome 72.1 2.5 8.4E-05 42.7 3.7 60 1-60 27-108 (338)
117 3t4e_A Quinate/shikimate dehyd 71.2 5.6 0.00019 40.3 6.1 96 2-118 160-296 (312)
118 2izz_A Pyrroline-5-carboxylate 70.3 3.5 0.00012 41.1 4.3 58 1-59 33-118 (322)
119 2g5c_A Prephenate dehydrogenas 67.8 1.9 6.7E-05 41.4 1.8 61 1-61 12-98 (281)
120 1mv8_A GMD, GDP-mannose 6-dehy 67.1 5.1 0.00017 41.7 4.9 61 1-61 11-125 (436)
121 3pid_A UDP-glucose 6-dehydroge 66.8 3.4 0.00011 43.9 3.5 41 21-62 100-156 (432)
122 2obn_A Hypothetical protein; s 64.6 6.2 0.00021 40.9 4.9 93 294-408 250-347 (349)
123 2o3j_A UDP-glucose 6-dehydroge 63.7 5.1 0.00017 42.6 4.2 40 23-62 79-138 (481)
124 2iz1_A 6-phosphogluconate dehy 63.3 5.8 0.0002 42.0 4.5 61 1-61 16-105 (474)
125 2f1k_A Prephenate dehydrogenas 62.9 3.3 0.00011 39.7 2.3 59 1-60 11-92 (279)
126 2dvm_A Malic enzyme, 439AA lon 60.8 5.6 0.00019 42.4 3.9 40 23-63 256-299 (439)
127 2y0c_A BCEC, UDP-glucose dehyd 60.7 5.1 0.00017 42.7 3.5 38 23-60 77-129 (478)
128 2raf_A Putative dinucleotide-b 60.5 2.9 0.0001 39.0 1.5 56 1-60 30-91 (209)
129 3ktd_A Prephenate dehydrogenas 58.7 3.1 0.00011 42.5 1.4 61 1-62 19-104 (341)
130 3c24_A Putative oxidoreductase 57.6 4.2 0.00014 39.4 2.1 61 1-61 23-103 (286)
131 1dlj_A UDP-glucose dehydrogena 56.6 5.4 0.00018 41.2 2.8 40 22-63 65-121 (402)
132 2vns_A Metalloreductase steap3 55.7 6.4 0.00022 36.8 2.9 60 1-61 39-117 (215)
133 2r32_A GCN4-PII/tumor necrosis 55.6 14 0.00047 34.4 4.9 42 427-478 11-56 (166)
134 1npy_A Hypothetical shikimate 55.3 7 0.00024 38.6 3.3 99 1-119 130-253 (271)
135 2dpo_A L-gulonate 3-dehydrogen 55.2 4.6 0.00016 40.8 1.9 41 21-61 78-125 (319)
136 1txg_A Glycerol-3-phosphate de 54.1 7.2 0.00025 38.1 3.1 35 23-59 64-104 (335)
137 1i36_A Conserved hypothetical 54.0 9.7 0.00033 36.0 3.9 58 1-60 11-89 (264)
138 1gpj_A Glutamyl-tRNA reductase 53.4 6.1 0.00021 40.9 2.6 60 1-60 178-267 (404)
139 2pgd_A 6-phosphogluconate dehy 51.9 9.4 0.00032 40.5 3.8 61 1-61 13-103 (482)
140 3g79_A NDP-N-acetyl-D-galactos 50.8 25 0.00086 37.6 6.9 37 26-62 97-150 (478)
141 1f0y_A HCDH, L-3-hydroxyacyl-C 49.1 10 0.00035 37.0 3.3 37 22-58 92-135 (302)
142 2rcy_A Pyrroline carboxylate r 48.4 13 0.00044 35.0 3.8 59 1-60 15-93 (262)
143 3b1f_A Putative prephenate deh 48.4 5 0.00017 38.7 0.9 61 1-61 17-103 (290)
144 4e12_A Diketoreductase; oxidor 48.4 12 0.0004 36.4 3.6 40 22-61 77-123 (283)
145 2ahr_A Putative pyrroline carb 48.2 15 0.00052 34.6 4.2 58 1-59 14-90 (259)
146 2yjz_A Metalloreductase steap4 51.3 4.4 0.00015 37.9 0.0 61 1-61 30-107 (201)
147 3k96_A Glycerol-3-phosphate de 45.1 14 0.00047 37.8 3.6 37 22-58 91-132 (356)
148 1pgj_A 6PGDH, 6-PGDH, 6-phosph 43.9 15 0.00051 39.0 3.8 61 1-61 12-105 (478)
149 2a9k_A RAS-related protein RAL 42.9 42 0.0014 28.7 5.9 56 354-412 122-180 (187)
150 3tri_A Pyrroline-5-carboxylate 39.5 20 0.00068 35.0 3.7 57 1-58 14-97 (280)
151 3a1s_A Iron(II) transport prot 36.5 18 0.0006 34.9 2.7 82 353-439 108-193 (258)
152 3d1l_A Putative NADP oxidoredu 36.4 10 0.00036 36.0 1.0 61 1-61 21-104 (266)
153 1yj8_A Glycerol-3-phosphate de 36.3 14 0.00049 37.2 2.1 37 23-59 96-141 (375)
154 1twd_A Copper homeostasis prot 36.0 1E+02 0.0035 30.7 8.1 105 353-461 49-167 (256)
155 1bg6_A N-(1-D-carboxylethyl)-L 35.1 33 0.0011 33.6 4.5 37 22-58 67-108 (359)
156 1ks9_A KPA reductase;, 2-dehyd 34.4 28 0.00096 32.8 3.7 58 1-58 11-96 (291)
157 2ew2_A 2-dehydropantoate 2-red 33.6 16 0.00055 34.9 1.8 30 30-59 74-108 (316)
158 1xd7_A YWNA; structural genomi 33.2 22 0.00074 31.4 2.5 17 152-168 25-41 (145)
159 3vtf_A UDP-glucose 6-dehydroge 31.5 68 0.0023 34.1 6.4 53 4-58 357-426 (444)
160 3ojo_A CAP5O; rossmann fold, c 31.2 59 0.002 34.3 5.9 56 4-59 339-407 (431)
161 1zej_A HBD-9, 3-hydroxyacyl-CO 30.5 16 0.00056 36.5 1.4 58 1-60 23-109 (293)
162 2eo2_A Adult MALE hypothalamus 30.1 4.2 0.00014 33.2 -2.4 22 265-286 2-23 (71)
163 1ega_A Protein (GTP-binding pr 29.6 2.1E+02 0.0071 27.9 9.2 57 354-412 115-174 (301)
164 3vtf_A UDP-glucose 6-dehydroge 29.5 26 0.0009 37.3 2.8 21 21-41 88-108 (444)
165 3dfu_A Uncharacterized protein 28.3 51 0.0017 32.0 4.4 54 1-59 17-75 (232)
166 1wn9_A The hypothetical protei 28.0 7.3 0.00025 35.1 -1.5 34 189-227 27-71 (131)
167 3g79_A NDP-N-acetyl-D-galactos 27.1 21 0.00073 38.2 1.6 56 4-59 377-450 (478)
168 3k6j_A Protein F01G10.3, confi 26.5 32 0.0011 36.8 2.8 38 23-61 124-168 (460)
169 4a7p_A UDP-glucose dehydrogena 26.3 53 0.0018 34.7 4.5 56 4-59 346-422 (446)
170 1evy_A Glycerol-3-phosphate de 26.1 10 0.00036 37.9 -1.0 37 23-59 78-124 (366)
171 1z82_A Glycerol-3-phosphate de 25.6 48 0.0016 32.7 3.8 57 1-59 25-111 (335)
172 1vp8_A Hypothetical protein AF 24.1 63 0.0022 31.2 4.1 40 365-407 25-64 (201)
173 4huj_A Uncharacterized protein 23.6 54 0.0018 30.4 3.5 60 1-61 34-115 (220)
174 1wi9_A Protein C20ORF116 homol 23.4 45 0.0015 27.3 2.5 24 144-167 15-38 (72)
175 3r6d_A NAD-dependent epimerase 21.9 37 0.0013 30.7 2.0 41 1-41 17-84 (221)
176 1tvl_A Protein YTNJ; beta-alph 20.6 1.9E+02 0.0064 30.4 7.3 61 367-432 367-428 (454)
177 3iev_A GTP-binding protein ERA 20.5 2.2E+02 0.0077 27.7 7.4 58 354-413 121-182 (308)
178 3lwf_A LIN1550 protein, putati 20.4 62 0.0021 29.5 3.1 21 148-168 42-62 (159)
No 1
>3do6_A Formate--tetrahydrofolate ligase; TM1766, putative formyltetrahydrofolate synthetase, structural genomics; HET: MSE; 1.85A {Thermotoga maritima} SCOP: c.37.1.0
Probab=100.00 E-value=2.9e-165 Score=1302.63 Aligned_cols=374 Identities=37% Similarity=0.618 Sum_probs=367.9
Q ss_pred CCCHHHHHHHcCCCccccccccCceeEechhhhhhhhcCCCCcEEeehH------------------HHHHhhc-cccee
Q psy7978 150 PKDINQLAQEIGLHVSEVSSYGRSKAKISTEVLDRLKRVQDGKYIILFL------------------KLLLLDF-GYTFA 210 (542)
Q Consensus 150 ~~~I~~ia~~lgl~~~~l~~yG~~kAKi~~~~l~~~~~~~~gklilVTa------------------~aL~~~l-~~~~~ 210 (542)
|+||++||+++||++|||||||+|||||++++++|++++++|||||||| |||+ |+ |++++
T Consensus 2 ~~pI~~iA~~lgi~~~~le~YG~~kAKv~~~~l~~~~~~~~GklIlVTaItPTPaGEGKtTttiGL~~aL~-~lgk~~~~ 80 (543)
T 3do6_A 2 MKPIKEIADQLELKDDILYPYGHYIAKIDHRFLKSLENHEDGKLILVTAVTPTPAGEGKTTTSIGLSMSLN-RIGKKSIV 80 (543)
T ss_dssp CCCHHHHHHHTTCCGGGEEEETTTEEEECTTHHHHTTTSCCCEEEEEEESSCCTTCCCHHHHHHHHHHHHH-HTTCCEEE
T ss_pred CCCHHHHHHHcCCCHHHHHhCCCccEEecHHHhhhhhcCCCCeEEEEEecCCCCCCCCccchHHHHHHHHH-hcCCeeEE
Confidence 7899999999999999999999999999999999998889999999999 9997 99 99999
Q ss_pred eeecCCCCCcccccccCCCCCceeeeeCcccccccccchhhHHHhhHHHHHHHHhhHhcccCCC-C--ceEeeeecccc-
Q psy7978 211 CVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAVTAANNLAAAQLDARMFHEATQT-D--QQLYSRLVPTI- 286 (542)
Q Consensus 211 ~lRePSlGPvFGiKGGAaGGG~sqv~Pme~iNLHfTGD~hAIt~A~NLlaA~iDn~i~~~n~l~-d--~i~w~R~~d~n- 286 (542)
|||||||||||||||||||||||||+|||||||||||||||||||||||||+|||||||||+|+ | +|+|+||||||
T Consensus 81 ~lRePSlGP~FGiKGGAaGGGysQViPMediNLHfTGD~HAItaAnNLLaA~iDn~i~~gn~L~IDp~~I~WkRv~D~ND 160 (543)
T 3do6_A 81 TLREPSLGPTLGLKGGATGGGRSRVLPSDEINLHFTGDMHAVASAHNLLAAVLDSHIKHGNELKIDITRVFWKRTMDMND 160 (543)
T ss_dssp EECCCCHHHHHHSCCSTTEETTEEEESHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEEEECCCEEESSCC
T ss_pred EEecCCCCCcCCcccccCCCcceeecchhhccccccchHHHHHHHHHHHHHHHHHHHhccCccCCCCCeEEEEecccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999 6 99999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy7978 287 -------------------------------------------------------------------------------- 286 (542)
Q Consensus 287 -------------------------------------------------------------------------------- 286 (542)
T Consensus 161 R~LR~IvvGlGg~~~G~~re~gFdITvASEiMAILcLa~dl~DLk~Rlg~ivvay~~~g~PVta~DL~~~GAmt~LLkDA 240 (543)
T 3do6_A 161 RALRSIVIGLGGSANGFPREDSFIITAASEVMAILALSENMKDLKERLGKIIVALDADRKIVRISDLGIQGAMAVLLKDA 240 (543)
T ss_dssp GGGSSEEESCSSGGGCCCEEECEEEGGGSHHHHHHHHCSSHHHHHHHHHTCEEEEETTSCEEEHHHHTCHHHHHHHTTTT
T ss_pred ceeeeeEECCCCCCCCCccccceeEEehhhhhhHHHhcCCHHHHHHHhcCEEEEEcCCCCeEehHhcccchhHHHHHHhh
Confidence
Q ss_pred -----------------------------------------------------------cccccCCCCCCCCEEEEEeee
Q psy7978 287 -----------------------------------------------------------LNIKCRTSGKIPDAVVLVTTV 307 (542)
Q Consensus 287 -----------------------------------------------------------~dIKCR~sGl~PdavVlVATv 307 (542)
||||||.+||+||||||||||
T Consensus 241 ikPNLvQTlEgtPa~VHgGPFANIAHGcnSviAtk~ALklaDyvVTEAGFGADlGaEKF~dIKCR~~gl~P~avVlVATv 320 (543)
T 3do6_A 241 INPNLVQTTEGTPALIHCGPFANIAHGTNSIIATKMAMKLSEYTVTEAGFGADLGAEKFIDFVSRVGGFYPNAAVLVATV 320 (543)
T ss_dssp TSCEEEEETTSCEEEECCCCCSSSSCCBCCHHHHHHHHHHCSEEEEEBSSSTTTHHHHHHHTHHHHHTCCCSEEEEEECH
T ss_pred cCccceeeccCCeeEEecCccccccccchHHHHHHHHHhccCeEEEecccccccchHhhcCccccccCCCCCEEEEEeeh
Confidence 999999999999999999999
Q ss_pred hhhhhcCCCCCCCCCCCCCcccCccCHHHHhccCCcccccCcccc-----CCCCCcE-EEeCCCCCCHHHHHHHHHHHHH
Q psy7978 308 RALKMHGGGPSVVSGQPLKPEYTENTRAVLRGEDSFLLYCKLDSQ-----YLEHPPV-TMLIYYTYTPAEWEIIRKAAKQ 381 (542)
Q Consensus 308 RALK~HGG~~~~~~g~p~~~~l~~en~~al~~G~~~~~~~NL~~H-----~fGvpvV-AiN~F~tDT~~Ei~~i~~~~~~ 381 (542)
||||||||+++ ++|.+||+++|++| |+||.|| +||+||| |||+|++||++||++|+++|++
T Consensus 321 RALK~hGG~~~--------~~l~~enl~al~~G-----~~NL~kHIen~~~fGvpvVVaiN~F~tDT~aEi~~v~~~~~~ 387 (543)
T 3do6_A 321 RALKYHGGANL--------KNIHEENLEALKEG-----FKNLRVHVENLRKFNLPVVVALNRFSTDTEKEIAYVVKECEK 387 (543)
T ss_dssp HHHHHHTTCCG--------GGTTSCCHHHHHHH-----HHHHHHHHHHHHHTTCCEEEEEECCTTCCHHHHHHHHHHHHT
T ss_pred HHHHhcCCCCh--------hhcCccCHHHHHHH-----HHHHHHHHHHHHHcCCCeEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 99999999985 89999999999999 9999999 7999999 9999999999999999999999
Q ss_pred cCCCeEEEccccccCchhHHHHHHHHHHHhccCCCCcccccCCCCCHHHHHHHHHHHHhcCCceecChHHHHHHHHHHHc
Q psy7978 382 AGAHDAVVCENWAKGGAGAADLADAVIKATELKDKQFKYLYDIHDPLLTKIQTVAREMYGVHKVDCPQPVLEKLQKLERL 461 (542)
Q Consensus 382 ~G~~~~~v~~~~a~GG~Ga~~LA~~Vv~a~~~~~~~f~~lY~~~~~l~eKI~~IA~~IYGA~~V~~s~~A~~~l~~~e~~ 461 (542)
+|+ ++++|+||++||+|+++||++|+++|+ ++ +|+|||++++||+|||++||++||||++|+||++|++||++||++
T Consensus 388 ~G~-~~~~s~~wa~GG~G~~~LA~~Vv~~~e-~~-~f~~lY~~~~~i~eKI~~Ia~~iYGA~~V~~s~~A~~~l~~~~~~ 464 (543)
T 3do6_A 388 LGV-RVAVSEVFKKGSEGGVELAKAVAEAAK-DV-EPAYLYEMNDPVEKKIEILAKEIYRAGRVEFSDTAKNALKFIKKH 464 (543)
T ss_dssp TTC-EEEEECHHHHGGGGSHHHHHHHHHHCC-CC-CCCCSSCTTSCHHHHHHHHHHHTSCCSEEEECHHHHHHHHHHHHT
T ss_pred cCC-CEEEechhhccchhHHHHHHHHHHHhc-CC-CcccccCCCCCHHHHHHHHHHHHcCCCeEEECHHHHHHHHHHHhc
Confidence 999 599999999999999999999999998 55 899999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEccCCCCCCCCCCCCCCCCCceEEeeEEEeecCCceEEEeecccccCCCCCCCCceeeeeeeCCCCeeeec
Q psy7978 462 GYGRLTVCMAKTALSLSGDPTIKGVVPPDYVLPIHDVYVSAGAGFVVVIAGDISKMPGLGTRPSIYDIDIDTRTGEIEGL 541 (542)
Q Consensus 462 G~~~lPVCmAKTqySlS~dp~~~G~~P~~f~~~vrdv~~~~GAgfiv~~~g~i~tMPGLp~~Paa~~idvd~~~g~i~GL 541 (542)
||++||||||||||||||||+++|+ |+||+|||||||+|+||||||++||+|||||||||+|+|++|||| ++|+|+||
T Consensus 465 G~~~lPvCmAKTqySlS~dp~~~G~-P~gf~~~irdv~~saGAGFiv~l~G~i~tMPGLp~~Paa~~idvd-~~G~i~GL 542 (543)
T 3do6_A 465 GFDELPVIVAKTPKSISHDPSLRGA-PEGYTFVVSDLFVSAGAGFVVALSGDINLMPGLPKKPNALNMDVD-DSGNIVGV 542 (543)
T ss_dssp TCTTSCEEEECCSSSSSSCTTCCSC-CCSCEEEECEEEEETTTTEEEEECSCCCSSCCCCSSCGGGGCEEC-TTSCEESC
T ss_pred CCCCCCEEEEccCcCcccCccccCC-CCCceEEeeEEEEcCCCcEEEEEeCcceeCCCCCCCccceeCcCC-CCCCEeeC
Confidence 9999999999999999999999999 999999999999999999999999999999999999999999999 79999999
Q ss_pred C
Q psy7978 542 F 542 (542)
Q Consensus 542 ~ 542 (542)
|
T Consensus 543 f 543 (543)
T 3do6_A 543 S 543 (543)
T ss_dssp C
T ss_pred C
Confidence 8
No 2
>3pzx_A Formate--tetrahydrofolate ligase; HET: TOE; 2.20A {Moorella thermoacetica} SCOP: c.37.1.10 PDB: 1fp7_A 1fpm_A* 3qb6_A* 3qus_A* 3rbo_A* 3sin_A* 1eg7_A
Probab=100.00 E-value=5.7e-157 Score=1246.18 Aligned_cols=387 Identities=43% Similarity=0.709 Sum_probs=373.9
Q ss_pred CCCCCchHHHhhcCCCCHHHHHHHcCCCccccccccCceeEechhhhhhhhcCCCCcEEeehH-----------------
Q psy7978 136 SPVPSDIDIARAQDPKDINQLAQEIGLHVSEVSSYGRSKAKISTEVLDRLKRVQDGKYIILFL----------------- 198 (542)
Q Consensus 136 ~~m~sd~eia~~~~~~~I~~ia~~lgl~~~~l~~yG~~kAKi~~~~l~~~~~~~~gklilVTa----------------- 198 (542)
++|+|||||||+++|+||++||+++||++||||+||+|||||++++++++++++++|+|+||+
T Consensus 2 ~~~~sDieIa~~~~~~pI~~ia~~~gi~~~~lE~YG~~kAKv~~~~l~~~~~~~~~K~IlVTS~~PTP~GEGKSTtsinL 81 (557)
T 3pzx_A 2 SKVPSDIEIAQAAKMKPVMELARGLGIQEDEVELYGKYKAKISLDVYRRLKDKPDGKLILVTAITPTPAGEGKTTTSVGL 81 (557)
T ss_dssp ----CCTTTTTTCCCCCHHHHHHHTTCCGGGEEEBSSSCEEECHHHHHHTTTSCCCEEEEEEESCCCTTCCCHHHHHHHH
T ss_pred CCCCCHHHHHhhCCCcCHHHHHHHcCCCHHHHHHhhCeeEEecHHHhhhhhccCCCcEEEEEcCCCCCCCCCchhHHHHH
Confidence 468999999999999999999999999999999999999999999999988888999999999
Q ss_pred -HHHHhhc-ccceeeeecCCCCCcccccccCCCCCceeeeeCcccccccccchhhHHHhhHHHHHHHHhhHhcccCCC-C
Q psy7978 199 -KLLLLDF-GYTFACVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAVTAANNLAAAQLDARMFHEATQT-D 275 (542)
Q Consensus 199 -~aL~~~l-~~~~~~lRePSlGPvFGiKGGAaGGG~sqv~Pme~iNLHfTGD~hAIt~A~NLlaA~iDn~i~~~n~l~-d 275 (542)
++|+ ++ +|++++||+|||||+||+||||+|||||||+|||||||||||||||||||||||||+|||||||||+|+ |
T Consensus 82 A~alA-~~GkkVLLiLR~Psl~~~FGikggaaggG~sqv~Pme~~nLhfTGD~hAItaAnNLlaA~iDn~i~~gn~l~id 160 (557)
T 3pzx_A 82 TDALA-RLGKRVMVCLREPSLGPSFGIKGGAAGGGYAQVVPMEDINLHFTGDIHAVTYAHNLLAAMVDNHLQQGNVLNID 160 (557)
T ss_dssp HHHHH-HTTCCEEEEECCCCSHHHHHTCCCCEEETTEEEECHHHHHSSCSSHHHHHHHHHHHHHHHHHHHHHTTCTTCBC
T ss_pred HHHHH-HcCCeEEEEeCCCCccccCCCCCCCCCCCceeeeechhcccCccCchhhHHHhhhHHHHHHHHHHhhcCCCCcc
Confidence 9995 99 999999999999999999999999999999999999999999999999999999999999999999998 6
Q ss_pred --ceEeeeecccc-------------------------------------------------------------------
Q psy7978 276 --QQLYSRLVPTI------------------------------------------------------------------- 286 (542)
Q Consensus 276 --~i~w~R~~d~n------------------------------------------------------------------- 286 (542)
+|+|+||||||
T Consensus 161 p~~i~w~Rv~D~NdR~LR~i~~glg~~~~G~~re~gFdITvASEiMAIlcLa~dl~Dlk~Rlg~ivv~~~~~g~PVta~D 240 (557)
T 3pzx_A 161 PRTITWRRVIDLNDRALRNIVIGLGGKANGVPRETGFDISVASEVMACLCLASDLMDLKERFSRIVVGYTYDGKPVTAGD 240 (557)
T ss_dssp GGGCCCCEEESSCCGGGSSEEESCSSGGGCCCEEECEEEGGGCHHHHHHHHCSSHHHHHHHHHHCEEEEBTTSCEEETGG
T ss_pred CCeeEEeeeecCChHHhhhhhhccCCCCCCCccccceeEEehhhhhhHHHhcCCHHHHHHHhhCEEEEEcCCCCeeeHHH
Confidence 99999999999
Q ss_pred -------------------------------------------------------------------------cccccCC
Q psy7978 287 -------------------------------------------------------------------------LNIKCRT 293 (542)
Q Consensus 287 -------------------------------------------------------------------------~dIKCR~ 293 (542)
||||||.
T Consensus 241 L~~~GAmt~LLkDAikPNLvQTlEgtPa~vHgGPFANIAHGcnSviAtk~ALkl~dyvVTEAGFGaDlGaEKF~dIKcR~ 320 (557)
T 3pzx_A 241 LEAQGSMALLMKDAIKPNLVQTLENTPAFIHGGPFANIAHGCNSIIATKTALKLADYVVTEAGFGADLGAEKFYDVKCRY 320 (557)
T ss_dssp GTCHHHHHHHTTTTTSCEEEEETTCCEEEECCCCCSSSSCCBCCHHHHHHHHHHCSEEEEEBSSCTTTHHHHHHHTHHHH
T ss_pred cccchhHHHHHHhhcCccceeeccCCeeEEecCcccccccCchHHHHHHHHHhccCeEEEecccCcCcchhhhcCCcccc
Confidence 9999999
Q ss_pred CCCCCCEEEEEeeehhhhhcCCCCCCCCCCCCCcccCccCHHHHhccCCcccccCcccc-----CCCCCcE-EEeCCCCC
Q psy7978 294 SGKIPDAVVLVTTVRALKMHGGGPSVVSGQPLKPEYTENTRAVLRGEDSFLLYCKLDSQ-----YLEHPPV-TMLIYYTY 367 (542)
Q Consensus 294 sGl~PdavVlVATvRALK~HGG~~~~~~g~p~~~~l~~en~~al~~G~~~~~~~NL~~H-----~fGvpvV-AiN~F~tD 367 (542)
+||+||||||||||||||||||+++ ++|.+||+++|++| |+||.|| +||+||| |||+|++|
T Consensus 321 ~gl~P~avVlVATvRALK~hGG~~~--------~~l~~en~~al~~G-----~~NL~kHien~~~fGvpvVVaiN~F~tD 387 (557)
T 3pzx_A 321 AGFKPDATVIVATVRALKMHGGVPK--------SDLATENLEALREG-----FANLEKHIENIGKFGVPAVVAINAFPTD 387 (557)
T ss_dssp HTCCCCEEEEEECHHHHHHHTTCCG--------GGTTSCCHHHHHHH-----HHHHHHHHHHHHTTTCCEEEEEECCTTC
T ss_pred cCCCCCEEEEEeehHHHHhcCCCCh--------hhcCccCHHHHHHH-----HHHHHHHHHHHHHcCCCeEEEEeCCCCC
Confidence 9999999999999999999999985 89999999999999 9999999 8999999 99999999
Q ss_pred CHHHHHHHHHHHHHcCCCeEEEccccccCchhHHHHHHHHHHHhcc-CCCCcccccCCCCCHHHHHHHHHHHHhcCCcee
Q psy7978 368 TPAEWEIIRKAAKQAGAHDAVVCENWAKGGAGAADLADAVIKATEL-KDKQFKYLYDIHDPLLTKIQTVAREMYGVHKVD 446 (542)
Q Consensus 368 T~~Ei~~i~~~~~~~G~~~~~v~~~~a~GG~Ga~~LA~~Vv~a~~~-~~~~f~~lY~~~~~l~eKI~~IA~~IYGA~~V~ 446 (542)
|++||++|+++|+++|+ ++++| |++||+|+++||++|+++|++ ++ +|+|||++++||+|||++||++||||++|+
T Consensus 388 T~aEi~~v~~~~~~~G~-~~~~~--wa~GG~G~~~LA~~Vv~~~~~~~~-~f~~lY~~~~~i~eKI~~Ia~~iYGA~~V~ 463 (557)
T 3pzx_A 388 TEAELNLLYELCAKAGA-EVALS--WAKGGEGGLELARKVLQTLESRPS-NFHVLYNLDLSIKDKIAKIATEIYGADGVN 463 (557)
T ss_dssp CHHHHHHHHHHCCSSEE-EEECH--HHHGGGGGHHHHHHHHHHHHHCCC-CCCCSSCTTSCHHHHHHHHHHHTTCCSCEE
T ss_pred CHHHHHHHHHHHHHcCC-CEEEE--ecccchhHHHHHHHHHHHHhcCCC-CccccCCCCCCHHHHHHHHHHHHhCCCeEE
Confidence 99999999999999999 49999 999999999999999999987 45 899999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHcCCCCCceeEEccCCCCCCCCCCCCCCCCCceEEeeEEEeecCCceEEEeecccccCCCCCCCCce
Q psy7978 447 CPQPVLEKLQKLERLGYGRLTVCMAKTALSLSGDPTIKGVVPPDYVLPIHDVYVSAGAGFVVVIAGDISKMPGLGTRPSI 526 (542)
Q Consensus 447 ~s~~A~~~l~~~e~~G~~~lPVCmAKTqySlS~dp~~~G~~P~~f~~~vrdv~~~~GAgfiv~~~g~i~tMPGLp~~Paa 526 (542)
||++|++||++||++||++||||||||||||||||+++|+ |+||+|||||||+|+||||||++||+|||||||||+|+|
T Consensus 464 ~s~~A~~~l~~~~~~G~~~lPvCmAKTqyS~S~dp~~~G~-P~gf~~~ir~v~~s~GAGFiv~l~G~i~tMPGLp~~Paa 542 (557)
T 3pzx_A 464 YTAEADKAIQRYESLGYGNLPVVMAKTQYSFSDDMTKLGR-PRNFTITVREVRLSAGGRLIVPITGAIMTMPGLPKRPAA 542 (557)
T ss_dssp ECHHHHHHHHHHHHTTCTTSCBCCBCCSSCSSSSTTCCSS-CCSCCEEECCCEEETTTEEECBCSSCCCCSCCCCSSCGG
T ss_pred ECHHHHHHHHHHHHcCCCCCCEEEEcCCcCcCcCccccCC-CCCceEEeeEEEEcCCCcEEEEEeCcceeCCCCCCCccc
Confidence 9999999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred eeeeeeCCCCeeeecC
Q psy7978 527 YDIDIDTRTGEIEGLF 542 (542)
Q Consensus 527 ~~idvd~~~g~i~GL~ 542 (542)
++|||| ++|+|+|||
T Consensus 543 ~~idvd-~~G~i~GLf 557 (557)
T 3pzx_A 543 CNIDID-ADGVITGLF 557 (557)
T ss_dssp GGCBCS-SSCCBCC--
T ss_pred eecccC-CCCCEeecC
Confidence 999999 799999998
No 3
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=100.00 E-value=1.1e-40 Score=338.97 Aligned_cols=110 Identities=41% Similarity=0.659 Sum_probs=106.3
Q ss_pred CchHHHHHHHhCCCe--eecCCCCCHHHHhhhCCEEEEeccCCCceecCcccCCeEEEeccccccCCCccCCCCeeeecc
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDV 78 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~T~nl~~~~k~ADIVIsAvG~p~lI~~d~ik~GavVIDVGin~~~d~~~~~~~kl~GDV 78 (542)
||||||+||+++||| +|||+|+||++++++|||||+|+|+|+||++|||||||+|||||||+.++ ++||||
T Consensus 191 VGkPla~LL~~~~ATVTi~Hs~T~dl~~~~~~ADIvV~A~G~p~~i~~d~vk~GavVIDVGin~~~~-------~~vGDV 263 (303)
T 4b4u_A 191 LGKPMAMMLLQANATVTICHSRTQNLPELVKQADIIVGAVGKAELIQKDWIKQGAVVVDAGFHPRDG-------GGVGDI 263 (303)
T ss_dssp THHHHHHHHHHTTCEEEEECTTCSSHHHHHHTCSEEEECSCSTTCBCGGGSCTTCEEEECCCBCCTT-------SCBCSB
T ss_pred ccchHHHHHHhcCCEEEEecCCCCCHHHHhhcCCeEEeccCCCCccccccccCCCEEEEeceecCCC-------CeECCc
Confidence 799999999999999 99999999999999999999999999999999999999999999998532 799999
Q ss_pred ccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHH
Q psy7978 79 QYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYI 117 (542)
Q Consensus 79 df~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~ 117 (542)
||++++++|+|||||||||||||+||||+||+++|+|++
T Consensus 264 df~~v~~~a~~iTPVPGGVGPmTiamLl~Ntv~aa~r~~ 302 (303)
T 4b4u_A 264 QLQGIEEIASAYTPVPGGVGPMTITTLIRQTVEAAEKAL 302 (303)
T ss_dssp CCTTGGGTCSEECCSSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHhhhCcEECCCCCCchHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999875
No 4
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=100.00 E-value=1.5e-37 Score=316.08 Aligned_cols=121 Identities=58% Similarity=0.975 Sum_probs=106.2
Q ss_pred CchHHHHHHHhCCCe--eecCCCCCHHHHhhhCCEEEEeccCCCceecCcccCCeEEEeccccccCCCccCCCCeeeecc
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDV 78 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~T~nl~~~~k~ADIVIsAvG~p~lI~~d~ik~GavVIDVGin~~~d~~~~~~~kl~GDV 78 (542)
||+|+|+||+++||| +|||+|+||++++++|||||+|+|+|+||+++|||+|++|||||+|+++|+++++|+|+||||
T Consensus 177 VG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~~~~d~~~~~g~klvGDV 256 (301)
T 1a4i_A 177 VGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINYVPDDKKPNGRKVVGDV 256 (301)
T ss_dssp THHHHHHHHHHTTCEEEEECTTCSSHHHHHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCBC----------CCBCSB
T ss_pred HHHHHHHHHHhCCCeEEEEECCcccHHHHhccCCEEEECCCCcccCCHHHcCCCcEEEEccCCCcccccccCCCeeeccc
Confidence 699999999999999 999999999999999999999999999999999999999999999998765555567899999
Q ss_pred ccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhhhc
Q psy7978 79 QYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRLL 121 (542)
Q Consensus 79 df~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~~~ 121 (542)
||++++++|+|||||||||||||+||||+||+++|++++..|+
T Consensus 257 df~~v~~~a~~iTPVPGGVGpmTiamLl~Ntv~aa~~~~~~~~ 299 (301)
T 1a4i_A 257 AYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFLEKFK 299 (301)
T ss_dssp CHHHHTTTCSEECCSSSSHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred cHHHhhhhceEeCCCCCCccHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999998887763
No 5
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=100.00 E-value=1.5e-36 Score=308.77 Aligned_cols=117 Identities=44% Similarity=0.777 Sum_probs=112.3
Q ss_pred CchHHHHHHHhCCCe--eecCCCCCHH--HHhhhCCEEEEeccCCCceecCcccCCeEEEeccccccCCCccCCCCeeee
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSKTKNIQ--DVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVG 76 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~T~nl~--~~~k~ADIVIsAvG~p~lI~~d~ik~GavVIDVGin~~~d~~~~~~~kl~G 76 (542)
+|+|+|++|+++||| +||++|+|++ +++++|||||+|+|+|++|+++|||+|++|||||+|+++|+++++|+|+||
T Consensus 177 VG~p~A~lL~~~gAtVtv~~~~T~~l~l~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~~~~~~~~~g~kl~G 256 (300)
T 4a26_A 177 VGAPVAALLMKENATVTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVGTTPVPDPSRKDGYRLVG 256 (300)
T ss_dssp THHHHHHHHHHTTCEEEEECTTSCHHHHHHHHHTCSEEEECSCCTTCBCGGGSCTTCEEEECCCEEESCSCSTTSCEEEC
T ss_pred HHHHHHHHHHHCCCeEEEEeCCCCCchhhhhhccCCEEEECCCCCCCCcHHhcCCCcEEEEEeccCCcCCcccCCceeec
Confidence 699999999999999 9999999999 999999999999999999999999999999999999988776667789999
Q ss_pred ccccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHH
Q psy7978 77 DVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYI 117 (542)
Q Consensus 77 DVdf~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~ 117 (542)
||||++++++|+|||||||||||||++|||+||+++|++++
T Consensus 257 DVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~Ntv~aa~~~~ 297 (300)
T 4a26_A 257 DVCFEEAAARAAWISPVPGGVGPMTIAMLLENTLEAFKAAL 297 (300)
T ss_dssp SBCHHHHTTTCSEEECTTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHhhceEeCCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998865
No 6
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.9e-36 Score=305.95 Aligned_cols=111 Identities=41% Similarity=0.659 Sum_probs=106.5
Q ss_pred CchHHHHHHHhCCCe--eecCCCCCHHHHhhhCCEEEEeccCCCceecCcccCCeEEEeccccccCCCccCCCCeeeecc
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDV 78 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~T~nl~~~~k~ADIVIsAvG~p~lI~~d~ik~GavVIDVGin~~~d~~~~~~~kl~GDV 78 (542)
+|||+|+||+++||| +|||+|+||++++++|||||+|+|+|+||+++|||+|++|||||+|+++++ |+||||
T Consensus 172 VG~p~A~lL~~~gAtVtv~h~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~~~~~g------kl~GDV 245 (285)
T 3p2o_A 172 VGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLESG------KIVGDV 245 (285)
T ss_dssp THHHHHHHHHHTTCEEEEECTTCSCHHHHHTTCSEEEECSSCTTCBCGGGSCTTEEEEECCCEECTTS------CEECSB
T ss_pred HHHHHHHHHHHCCCeEEEEeCCchhHHHHhhcCCEEEECCCCCCcCCHHHcCCCeEEEEeccCcccCC------CEeccc
Confidence 699999999999999 999999999999999999999999999999999999999999999997652 899999
Q ss_pred ccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHH
Q psy7978 79 QYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYI 117 (542)
Q Consensus 79 df~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~ 117 (542)
||++++++|+|||||||||||||++|||+||+++|++++
T Consensus 246 df~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~a~~~~~ 284 (285)
T 3p2o_A 246 DFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAKNRL 284 (285)
T ss_dssp CHHHHTTTEEEECCSSSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHhhheEeCCCCCcCcHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999998754
No 7
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=100.00 E-value=2.2e-36 Score=305.90 Aligned_cols=114 Identities=45% Similarity=0.754 Sum_probs=108.4
Q ss_pred CchHHHHHHHhCCCe--eecCCCCCHHHHhhhCCEEEEeccCCCceecCcccCCeEEEeccccccCCCccCCCCeeeecc
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDV 78 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~T~nl~~~~k~ADIVIsAvG~p~lI~~d~ik~GavVIDVGin~~~d~~~~~~~kl~GDV 78 (542)
||+|+|+||+++||| +|||+|+||++++++|||||+|+|+|+||+++|||+|++|||||+|+++++ |+||||
T Consensus 171 VG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~lI~~~~vk~GavVIDVgi~r~~~g------~l~GDV 244 (288)
T 1b0a_A 171 VGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENG------KVVGDV 244 (288)
T ss_dssp THHHHHHHHHTTTCEEEEECSSCSCHHHHHHHCSEEEECSCCTTCBCTTTSCTTCEEEECCCEECTTS------CEECSB
T ss_pred HHHHHHHHHHHCCCeEEEEeCCchhHHHHhccCCEEEECCCCcCcCCHHHcCCCcEEEEccCCccCCC------CccCCc
Confidence 699999999999999 999999999999999999999999999999999999999999999997642 899999
Q ss_pred ccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhhh
Q psy7978 79 QYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRL 120 (542)
Q Consensus 79 df~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~~ 120 (542)
||++++++|+|||||||||||||+||||+||++++++++..+
T Consensus 245 df~~v~~~a~~iTPVPGGVGpmT~a~Ll~Ntv~aa~~~~~~~ 286 (288)
T 1b0a_A 245 VFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQ 286 (288)
T ss_dssp CHHHHHHHCSEECCSSSSSHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CHHHHhhhccEecCCCCCccHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999766543
No 8
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=100.00 E-value=2.7e-36 Score=304.99 Aligned_cols=111 Identities=48% Similarity=0.744 Sum_probs=106.6
Q ss_pred CchHHHHHHHhCCCe--eecCCCCCHHHHhhhCCEEEEeccCCCceecCcccCCeEEEeccccccCCCccCCCCeeeecc
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDV 78 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~T~nl~~~~k~ADIVIsAvG~p~lI~~d~ik~GavVIDVGin~~~d~~~~~~~kl~GDV 78 (542)
+|||+|+||+++||| +|||+|+||++++++|||||+|+|+|++|+++|||+|++|||||+|+++++ |+||||
T Consensus 173 VG~plA~lL~~~gAtVtv~hs~T~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~~~~g------kl~GDV 246 (286)
T 4a5o_A 173 VGRPMALELLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQADG------RLVGDV 246 (286)
T ss_dssp THHHHHHHHHHTTCEEEEECTTCSCHHHHHHTCSEEEECCCCTTCBCGGGSCTTCEEEECCSCSSCCC------CSSCSB
T ss_pred hHHHHHHHHHHCCCeEEEEeCCCcCHHHHhccCCEEEECCCCCCCCCHHHcCCCeEEEEecccccccC------CcccCc
Confidence 699999999999999 999999999999999999999999999999999999999999999997652 899999
Q ss_pred ccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHH
Q psy7978 79 QYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYI 117 (542)
Q Consensus 79 df~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~ 117 (542)
||++++++|+|||||||||||||++|||+||+++|++++
T Consensus 247 df~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~aa~~~~ 285 (286)
T 4a5o_A 247 EYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLH 285 (286)
T ss_dssp CHHHHHHHCSEECCSSCSHHHHHHHHHHHHHHHHHHHTC
T ss_pred cHHHHHhhceEeCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999998754
No 9
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=100.00 E-value=1.6e-35 Score=298.10 Aligned_cols=111 Identities=37% Similarity=0.604 Sum_probs=106.1
Q ss_pred CchHHHHHHHhCCCe--eecCCCCCHHHHhhhCCEEEEeccCCCceecCcccCCeEEEeccccccCCCccCCCCeeeecc
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDV 78 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~T~nl~~~~k~ADIVIsAvG~p~lI~~d~ik~GavVIDVGin~~~d~~~~~~~kl~GDV 78 (542)
+|+|+|++|+++||| +||++|+||++++++|||||+|+|+|++|+++|||+|++|||||+|+ .++ |+||||
T Consensus 162 VG~plA~lL~~~gAtVtv~~~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~-~~g------kl~GDV 234 (276)
T 3ngx_A 162 VGRPLSMMLLNRNYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGINY-VND------KVVGDA 234 (276)
T ss_dssp THHHHHHHHHHTTCEEEEECTTCSCHHHHHHHSSEEEECSSCTTCBCGGGCCTTCEEEECCCEE-ETT------EEECSB
T ss_pred HHHHHHHHHHHCCCeEEEEeCCcccHHHhhccCCEEEECCCCCccccHhhccCCcEEEEeccCc-cCC------ceeccc
Confidence 699999999999999 99999999999999999999999999999999999999999999999 442 899999
Q ss_pred ccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHh
Q psy7978 79 QYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYID 118 (542)
Q Consensus 79 df~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~ 118 (542)
||++++++|+|||||||||||||++|||+||+++|+++..
T Consensus 235 df~~v~~~a~~iTPVPGGVGpmT~a~Ll~n~v~a~~~~~~ 274 (276)
T 3ngx_A 235 NFEDLSEYVEAITPVPGGVGPITATNILENVVKAAEFQKN 274 (276)
T ss_dssp CHHHHHTTSSEECCTTTSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHhhhceEeCCCCCcChHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999987653
No 10
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=100.00 E-value=1.8e-35 Score=298.88 Aligned_cols=109 Identities=42% Similarity=0.695 Sum_probs=105.1
Q ss_pred CchHHHHHHHhCCCe--eecCCCCCHHHHhhhCCEEEEeccCCCceecCcccCCeEEEeccccccCCCccCCCCeeeecc
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDV 78 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~T~nl~~~~k~ADIVIsAvG~p~lI~~d~ik~GavVIDVGin~~~d~~~~~~~kl~GDV 78 (542)
+|+|+|+||+++||| +|||+|+||++++++|||||+|+|+|++|+++|||+|++|||||+|+++ | |+||||
T Consensus 173 VG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~~~------g-~l~GDV 245 (285)
T 3l07_A 173 VGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVD------G-KIVGDV 245 (285)
T ss_dssp THHHHHHHHHHTTCEEEEECTTCSSHHHHHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCEEET------T-EEECSB
T ss_pred hHHHHHHHHHHCCCeEEEEeCCchhHHHhcccCCEEEECCCCCCCCCHHHcCCCcEEEEecccCcC------C-ceecCc
Confidence 699999999999999 9999999999999999999999999999999999999999999999964 2 899999
Q ss_pred ccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHH
Q psy7978 79 QYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERY 116 (542)
Q Consensus 79 df~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~ 116 (542)
||++++++|+|||||||||||||++|||+||+++|+++
T Consensus 246 df~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~a~~~~ 283 (285)
T 3l07_A 246 DFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQEL 283 (285)
T ss_dssp CHHHHTTTCSEECCSSSSSHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHhhheEeCCCCCcChHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999875
No 11
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=100.00 E-value=8.5e-34 Score=286.15 Aligned_cols=107 Identities=36% Similarity=0.594 Sum_probs=102.9
Q ss_pred CchHHHHHHHhC--CCe--eecCCCCCHHHHhhhCCEEEEeccCCCceecCcccCCeEEEeccccccCCCccCCCCeeee
Q psy7978 1 MWSSLQTFWLWV--LAN--PSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVG 76 (542)
Q Consensus 1 vgkPLa~LL~~~--~AT--icHs~T~nl~~~~k~ADIVIsAvG~p~lI~~d~ik~GavVIDVGin~~~d~~~~~~~kl~G 76 (542)
||+|+|+||+++ ||| +|||+|+||++++++|||||+|+|+|+||+++|||+|++|||||++++++ .+||
T Consensus 170 VG~p~A~lL~~~g~~atVtv~h~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~r~~~-------glvG 242 (281)
T 2c2x_A 170 VGRPLGLLLTRRSENATVTLCHTGTRDLPALTRQADIVVAAVGVAHLLTADMVRPGAAVIDVGVSRTDD-------GLVG 242 (281)
T ss_dssp THHHHHHHHTSTTTCCEEEEECTTCSCHHHHHTTCSEEEECSCCTTCBCGGGSCTTCEEEECCEEEETT-------EEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEEECchhHHHHHHhhCCEEEECCCCCcccCHHHcCCCcEEEEccCCCCCC-------CccC
Confidence 699999999999 999 99999999999999999999999999999999999999999999999753 2999
Q ss_pred ccccccccccceEeecCCCCcchhhHHHHHHhHHHHHHH
Q psy7978 77 DVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAER 115 (542)
Q Consensus 77 DVdf~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~ 115 (542)
||| ++++++|+|||||||||||||+||||+||+++|++
T Consensus 243 DVd-~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~aa~~ 280 (281)
T 2c2x_A 243 DVH-PDVWELAGHVSPNPGGVGPLTRAFLLTNVVELAER 280 (281)
T ss_dssp SBC-GGGGGTCSEEECSSSSSHHHHHHHHHHHHHHHHHH
T ss_pred ccc-cchhhheeeecCCCCCccHHHHHHHHHHHHHHHHh
Confidence 999 99999999999999999999999999999999975
No 12
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=99.88 E-value=5e-23 Score=211.22 Aligned_cols=101 Identities=21% Similarity=0.294 Sum_probs=92.3
Q ss_pred CchHHHHHHHhCCCe--ee------------------cCC-----C--CCHHHHhhhCCEEEEeccCCCc-eecCcccCC
Q psy7978 1 MWSSLQTFWLWVLAN--PS------------------MSK-----T--KNIQDVVKSADILVVGIGQPEY-VKGDWIKPG 52 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--ic------------------Hs~-----T--~nl~~~~k~ADIVIsAvG~p~l-I~~d~ik~G 52 (542)
||+|+|.+|+++||| +| |++ | .||++++++|||||+|+|+|++ |+++|||+|
T Consensus 189 VG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~~e~vk~G 268 (320)
T 1edz_A 189 VGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEYIKEG 268 (320)
T ss_dssp THHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCCCTTCCBCTTTSCTT
T ss_pred hHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECCCCCcceeCHHHcCCC
Confidence 599999999999999 88 877 4 7999999999999999999999 999999999
Q ss_pred eEEEeccccccCCCccCCCCeeeeccccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 53 AVVIDCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 53 avVIDVGin~~~d~~~~~~~kl~GDVdf~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
++|||||+++ |+| +++.+++++|||| |||||+||||+||++++++++..
T Consensus 269 avVIDVgi~r--------------D~d-~~v~~~a~~itPv---VGpmT~a~Ll~n~~~a~~~~~~~ 317 (320)
T 1edz_A 269 AVCINFACTK--------------NFS-DDVKEKASLYVPM---TGKVTIAMLLRNMLRLVRNVELS 317 (320)
T ss_dssp EEEEECSSSC--------------CBC-GGGGTTEEEEESC---CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEcCCCc--------------ccc-hhHHhhCCeeCCC---ccHHHHHHHHHHHHHHHHHhccc
Confidence 9999999975 443 6899999999998 99999999999999999876543
No 13
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.36 E-value=0.00019 Score=71.57 Aligned_cols=104 Identities=17% Similarity=0.246 Sum_probs=73.9
Q ss_pred CchHHHHHHHhCCCe-eecCCC-----------------CCHHHHhhhCCEEEEeccCCCceec---CcccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT-----------------KNIQDVVKSADILVVGIGQPEYVKG---DWIKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T-----------------~nl~~~~k~ADIVIsAvG~p~lI~~---d~ik~GavVIDVG 59 (542)
+|+.++..|...|++ +++.++ .++.+.+++||+||.+++. ++++. +.+|+|+++||++
T Consensus 168 iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-~~i~~~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 168 TGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS-MILNQTVLSSMTPKTLILDLA 246 (300)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-CCBCHHHHTTSCTTCEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-hhhCHHHHHhCCCCCEEEEEe
Confidence 478889999888888 333322 2567788999999999996 67765 4568999999999
Q ss_pred ccccCCCccCCCCeeeecccccccccc-ceE-eec-CCCCcchhhHHHHHHhHHHHHHHHHh
Q psy7978 60 INSVPDASKASGQKLVGDVQYAEAKNV-ASW-ITP-VPGGVGPMTVAMLMNNTVLSAERYID 118 (542)
Q Consensus 60 in~~~d~~~~~~~kl~GDVdf~~v~~~-a~~-iTP-VPGGVGpmTvamL~~N~v~aa~~~~~ 118 (542)
.... +++++.+... +.+ ..| +||+++|.|.+.|+.|.+..+...+.
T Consensus 247 ~g~~-------------~~~~~~a~~~G~~~i~~pg~~g~v~~a~a~~l~~~~~~~~l~~~~ 295 (300)
T 2rir_A 247 SRPG-------------GTDFKYAEKQGIKALLAPGLPGIVAPKTAGQILANVLSKLLAEIQ 295 (300)
T ss_dssp STTC-------------SBCHHHHHHHTCEEEECCCHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC-------------CcCHHHHHHCCCEEEECCCCCCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 6431 2334332222 222 247 89999999999999998877655443
No 14
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.33 E-value=0.00026 Score=68.99 Aligned_cols=97 Identities=8% Similarity=0.053 Sum_probs=68.1
Q ss_pred CchHHHHHHHhCCCe--eecCCCC--------------CHHHHhhhCCEEEEeccCC------CceecCcccCCeEEEec
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSKTK--------------NIQDVVKSADILVVGIGQP------EYVKGDWIKPGAVVIDC 58 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~T~--------------nl~~~~k~ADIVIsAvG~p------~lI~~d~ik~GavVIDV 58 (542)
+|++++..|.+.|++ +|+.... ++.+. +++||||+|++.. ..+..+++++|++|||+
T Consensus 127 ~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~~~~l~~g~~viD~ 205 (263)
T 2d5c_A 127 AGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAVPLEKA-REARLLVNATRVGLEDPSASPLPAELFPEEGAAVDL 205 (263)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCEECCGGGG-GGCSEEEECSSTTTTCTTCCSSCGGGSCSSSEEEES
T ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccchhhHhhc-cCCCEEEEccCCCCCCCCCCCCCHHHcCCCCEEEEe
Confidence 478999999999988 5654321 34455 7899999999987 45677899999999999
Q ss_pred cccccCCCccCCCCeeeeccccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHh
Q psy7978 59 GINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYID 118 (542)
Q Consensus 59 Gin~~~d~~~~~~~kl~GDVdf~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~ 118 (542)
+.+.. + + + +....+..+ ++++|| ..||+.+.+.+++.+.+
T Consensus 206 ~~~p~-~-t-----~------l~~~a~~~g-~~~v~g------~~mlv~q~~~a~~~w~g 245 (263)
T 2d5c_A 206 VYRPL-W-T-----R------FLREAKAKG-LKVQTG------LPMLAWQGALAFRLWTG 245 (263)
T ss_dssp CCSSS-S-C-----H------HHHHHHHTT-CEEECS------HHHHHHHHHHHHHHHHS
T ss_pred ecCCc-c-c-----H------HHHHHHHCc-CEEECc------HHHHHHHHHHHHHHHhC
Confidence 97742 1 0 1 222222233 366766 78999998888776543
No 15
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.21 E-value=0.00026 Score=69.78 Aligned_cols=100 Identities=10% Similarity=0.054 Sum_probs=69.7
Q ss_pred CchHHHHHHHhCCCe-eecCCCC----CHHHH---------------h-hhCCEEEEeccCCCc-----eecCcccCCeE
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK----NIQDV---------------V-KSADILVVGIGQPEY-----VKGDWIKPGAV 54 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~----nl~~~---------------~-k~ADIVIsAvG~p~l-----I~~d~ik~Gav 54 (542)
+|++++..|.+.|++ ++..+|. .+.+. . .++||||.++|.+.. ++.+++++|++
T Consensus 130 ~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~~~~~i~~~~l~~~~~ 209 (271)
T 1nyt_A 130 ASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISGDIPAIPSSLIHPGIY 209 (271)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGTCCCCCCGGGCCTTCE
T ss_pred HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCCCCCCCCHHHcCCCCE
Confidence 489999999999988 3333442 22211 1 379999999998776 78889999999
Q ss_pred EEeccccccCCCccCCCCeeeeccccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 55 VIDCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 55 VIDVGin~~~d~~~~~~~kl~GDVdf~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
|+|+..+... ..|....+..++ +|+++| ..||+.|.+.+++.+.+.
T Consensus 210 v~D~~y~p~~-------------t~~~~~a~~~G~-~~~~~G-----~~mLv~Q~~~af~~w~g~ 255 (271)
T 1nyt_A 210 CYDMFYQKGK-------------TPFLAWCEQRGS-KRNADG-----LGMLVAQAAHAFLLWHGV 255 (271)
T ss_dssp EEESCCCSSC-------------CHHHHHHHHTTC-CEEECT-----HHHHHHHHHHHHHHHHSS
T ss_pred EEEeccCCcC-------------CHHHHHHHHcCC-CeecCC-----HHHHHHHHHHHHHHHhCC
Confidence 9999887521 123333334444 545555 779999999988876543
No 16
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.09 E-value=0.00064 Score=68.25 Aligned_cols=97 Identities=18% Similarity=0.183 Sum_probs=68.7
Q ss_pred CchHHHHHHHhCCC-e--eecCCCC---------------------CHHHHhhhCCEEEEeccCCC-------ceecCcc
Q psy7978 1 MWSSLQTFWLWVLA-N--PSMSKTK---------------------NIQDVVKSADILVVGIGQPE-------YVKGDWI 49 (542)
Q Consensus 1 vgkPLa~LL~~~~A-T--icHs~T~---------------------nl~~~~k~ADIVIsAvG~p~-------lI~~d~i 49 (542)
+|++++..|.+.|+ + +++ +|. ++.+.++++||||.+++.+. .+..+++
T Consensus 152 ~g~aia~~L~~~G~~~V~v~n-R~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~~~~~~~~i~~~~l 230 (297)
T 2egg_A 152 GARGIYFSLLSTAAERIDMAN-RTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMHPRVEVQPLSLERL 230 (297)
T ss_dssp HHHHHHHHHHTTTCSEEEEEC-SSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCSSCCSCCSSCCTTC
T ss_pred HHHHHHHHHHHCCCCEEEEEe-CCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCCCCCCCCCCCHHHc
Confidence 47899999999998 4 443 331 24456688999999999765 3677899
Q ss_pred cCCeEEEeccccccCCCccCCCCeeeeccccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHh
Q psy7978 50 KPGAVVIDCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYID 118 (542)
Q Consensus 50 k~GavVIDVGin~~~d~~~~~~~kl~GDVdf~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~ 118 (542)
++|++|+|+..+.. .+ + |-...+.+++ ++++| ..||+.|.+.+++.+.+
T Consensus 231 ~~~~~v~D~~y~P~--~T-----~------ll~~A~~~G~-~~v~G------l~MLv~Qa~~af~~w~g 279 (297)
T 2egg_A 231 RPGVIVSDIIYNPL--ET-----K------WLKEAKARGA-RVQNG------VGMLVYQGALAFEKWTG 279 (297)
T ss_dssp CTTCEEEECCCSSS--SC-----H------HHHHHHHTTC-EEECS------HHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEcCCCCC--CC-----H------HHHHHHHCcC-EEECC------HHHHHHHHHHHHHHHhC
Confidence 99999999998742 11 1 2222223343 66777 67999999988877654
No 17
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.65 E-value=0.0017 Score=64.38 Aligned_cols=97 Identities=13% Similarity=0.153 Sum_probs=65.2
Q ss_pred CchHHHHHHHhCCCe--eecCCCC---CH---------------------HHHhhhCCEEEEeccCCCc-------e-ec
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSKTK---NI---------------------QDVVKSADILVVGIGQPEY-------V-KG 46 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~T~---nl---------------------~~~~k~ADIVIsAvG~p~l-------I-~~ 46 (542)
+|++++..|+++| + +++.... .+ .+.+.++||||.++|.... + +.
T Consensus 139 iG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~~~~~~~~~~~~~~~ 217 (287)
T 1nvt_A 139 AARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIGMYPNIDVEPIVKA 217 (287)
T ss_dssp HHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCTTCTTCCSSCCSSCS
T ss_pred HHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCCCCCCCCCCCCCCCH
Confidence 4899999999999 9 4544322 12 1234568999999997653 5 77
Q ss_pred CcccCCeEEEeccccccCCCccCCCCeeeeccccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHh
Q psy7978 47 DWIKPGAVVIDCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYID 118 (542)
Q Consensus 47 d~ik~GavVIDVGin~~~d~~~~~~~kl~GDVdf~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~ 118 (542)
++++++++|+|+..+... + ++. ...+.+++. .+ +| ..||+.|.+.+++.+..
T Consensus 218 ~~l~~~~~v~Dv~y~p~~--t-----~ll------~~a~~~G~~-~~-~G-----l~mL~~Qa~~af~~w~g 269 (287)
T 1nvt_A 218 EKLREDMVVMDLIYNPLE--T-----VLL------KEAKKVNAK-TI-NG-----LGMLIYQGAVAFKIWTG 269 (287)
T ss_dssp TTCCSSSEEEECCCSSSS--C-----HHH------HHHHTTTCE-EE-CT-----HHHHHHHHHHHHHHHHS
T ss_pred HHcCCCCEEEEeeeCCcc--C-----HHH------HHHHHCCCE-Ee-Cc-----HHHHHHHHHHHHHHHhC
Confidence 899999999999987521 1 222 222334442 23 45 47999999888876654
No 18
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.65 E-value=0.00051 Score=67.80 Aligned_cols=101 Identities=13% Similarity=0.103 Sum_probs=67.6
Q ss_pred CchHHHHHHHhCCCe-eecCCCC----CHHH--------------Hh-h-hCCEEEEeccCCCc-----eecCcccCCeE
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK----NIQD--------------VV-K-SADILVVGIGQPEY-----VKGDWIKPGAV 54 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~----nl~~--------------~~-k-~ADIVIsAvG~p~l-----I~~d~ik~Gav 54 (542)
+|++++..|.+.|++ ++..+|. .+.+ .+ + ++||||.++|.+.. ++.++++++.+
T Consensus 130 ~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~~~~~~~i~~~~l~~~~~ 209 (272)
T 1p77_A 130 ATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLSGGTASVDAEILKLGSA 209 (272)
T ss_dssp HHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC-------CCCHHHHHHCSC
T ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCCCCCCCCCCHHHcCCCCE
Confidence 478999999999987 3333442 2221 12 3 79999999998765 66788999999
Q ss_pred EEeccccccCCCccCCCCeeeeccccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 55 VIDCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 55 VIDVGin~~~d~~~~~~~kl~GDVdf~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
|+|+..+... |..|....+..++.|+++| ..||+.+.+.+++.+...
T Consensus 210 v~D~~y~p~~------------~t~ll~~a~~~G~~~~v~G------~~mLv~Qa~~af~~w~g~ 256 (272)
T 1p77_A 210 FYDMQYAKGT------------DTPFIALCKSLGLTNVSDG------FGMLVAQAAHSFHLWRGV 256 (272)
T ss_dssp EEESCCCTTS------------CCHHHHHHHHTTCCCEECS------HHHHHHHHHHHHHHHHSC
T ss_pred EEEeeCCCCc------------CCHHHHHHHHcCCCEeeCC------HHHHHHHHHHHHHHHhCC
Confidence 9999987532 1234333344555557775 779999999888776543
No 19
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.60 E-value=0.002 Score=63.49 Aligned_cols=96 Identities=17% Similarity=0.121 Sum_probs=67.1
Q ss_pred CchHHHHHHHhCCCe--eecCCC---------------CCHHHHhhhCCEEEEeccCCC------ceecCcccCCeEEEe
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSKT---------------KNIQDVVKSADILVVGIGQPE------YVKGDWIKPGAVVID 57 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~T---------------~nl~~~~k~ADIVIsAvG~p~------lI~~d~ik~GavVID 57 (542)
+|++++..|.+.|++ +++... .++.+.++++||||.|++... .++.+++++|++|+|
T Consensus 140 ~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i~~~~l~~g~~viD 219 (275)
T 2hk9_A 140 ASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFNYDLIKKDHVVVD 219 (275)
T ss_dssp HHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCCCSSCGGGCCTTSEEEE
T ss_pred HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCCCHHHcCCCCEEEE
Confidence 478999999988887 444321 156677889999999998763 466788999999999
Q ss_pred ccccccCCCccCCCCeeeeccccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHh
Q psy7978 58 CGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYID 118 (542)
Q Consensus 58 VGin~~~d~~~~~~~kl~GDVdf~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~ 118 (542)
++. . .. ++. +.+++ .+ ++.+|| ..||+.+.+.+++.+.+
T Consensus 220 v~~-~-~t-------~ll-----~~a~~-~g-~~~v~g------~~mlv~q~~~a~~~w~g 258 (275)
T 2hk9_A 220 IIY-K-ET-------KLL-----KKAKE-KG-AKLLDG------LPMLLWQGIEAFKIWNG 258 (275)
T ss_dssp SSS-S-CC-------HHH-----HHHHH-TT-CEEECS------HHHHHHHHHHHHHHHHC
T ss_pred cCC-C-hH-------HHH-----HHHHH-Cc-CEEECC------HHHHHHHHHHHHHHHHC
Confidence 987 2 11 111 22222 22 356676 78999988888776654
No 20
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=96.33 E-value=0.0036 Score=66.86 Aligned_cols=59 Identities=19% Similarity=0.223 Sum_probs=51.6
Q ss_pred CchHHHHHHHhCCCe--eecCC-------------CCCHHHHhhhCCEEEEeccCCCceecCcc---cCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSK-------------TKNIQDVVKSADILVVGIGQPEYVKGDWI---KPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~-------------T~nl~~~~k~ADIVIsAvG~p~lI~~d~i---k~GavVIDVG 59 (542)
||++++.+|...|++ ++... ..++.+.+++|||||.+.|..++|+.+++ |+|++|||+|
T Consensus 222 IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvg 298 (436)
T 3h9u_A 222 VGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIG 298 (436)
T ss_dssp HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSBCTTTGGGCCTTEEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEECCCCcCccCHHHHhhcCCCcEEEEeC
Confidence 589999999999999 44331 13789999999999999999999999988 8999999998
No 21
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.18 E-value=0.0028 Score=62.89 Aligned_cols=99 Identities=14% Similarity=0.167 Sum_probs=69.0
Q ss_pred CchHHHHHHHhCCCe-eecCCC-----------------CCHHHHhhhCCEEEEeccCCCceecC---cccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT-----------------KNIQDVVKSADILVVGIGQPEYVKGD---WIKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T-----------------~nl~~~~k~ADIVIsAvG~p~lI~~d---~ik~GavVIDVG 59 (542)
||+.++..|...|+. +++.++ .++.+.++++|+||.+++. +++..+ .+|+|+++||++
T Consensus 166 iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-~~i~~~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 166 VGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPA-LVVTANVLAEMPSHTFVIDLA 244 (293)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS-CCBCHHHHHHSCTTCEEEECS
T ss_pred HHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCCh-HHhCHHHHHhcCCCCEEEEec
Confidence 478888888888888 333332 2466778999999999974 677654 358999999999
Q ss_pred ccccCCCccCCCCeeeecccccccccc-ceE--eecCCCCcchhhHHHHHHhHHHHH
Q psy7978 60 INSVPDASKASGQKLVGDVQYAEAKNV-ASW--ITPVPGGVGPMTVAMLMNNTVLSA 113 (542)
Q Consensus 60 in~~~d~~~~~~~kl~GDVdf~~v~~~-a~~--iTPVPGGVGpmTvamL~~N~v~aa 113 (542)
.... +++++.+... ..+ +.-.|+.|+|.|.+.++.|.+..+
T Consensus 245 r~~~-------------~~~~~~a~~~Gv~~~~~~~l~~~v~p~~a~~~~~~~~~~~ 288 (293)
T 3d4o_A 245 SKPG-------------GTDFRYAEKRGIKALLVPGLPGIVAPKTAGRILADVLVKL 288 (293)
T ss_dssp STTC-------------SBCHHHHHHHTCEEEECCCHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCC-------------CCCHHHHHHCCCEEEECCCCCcccCHHHHHHHHHHHHHHH
Confidence 6431 2344332222 222 255688899999999999887644
No 22
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.05 E-value=0.0086 Score=62.89 Aligned_cols=88 Identities=18% Similarity=0.261 Sum_probs=56.2
Q ss_pred CHHHHhhhCCEEEEeccCC-----CceecCcc---cCCeEEEeccccccCCCccCCCCeeeecccccccccc-ceEeecC
Q psy7978 23 NIQDVVKSADILVVGIGQP-----EYVKGDWI---KPGAVVIDCGINSVPDASKASGQKLVGDVQYAEAKNV-ASWITPV 93 (542)
Q Consensus 23 nl~~~~k~ADIVIsAvG~p-----~lI~~d~i---k~GavVIDVGin~~~d~~~~~~~kl~GDVdf~~v~~~-a~~iTPV 93 (542)
++.+.+++|||||.++..| .+|+.+++ |+|++|||+++.. .++=. ..+ -+.+ |. ...+ .-.++=.
T Consensus 258 ~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~--GG~~e-~t~-~~~~-~~-~~gV~~~~v~nl 331 (381)
T 3p2y_A 258 ALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGET--GGNCE-LTE-PGRT-IV-HHGVTITSPLNL 331 (381)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGG--TCSBT-TCC-TTCE-EE-ETTEEEECCSCT
T ss_pred HHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCC--CCccc-ccc-CCCe-EE-ECCEEEEeeCCC
Confidence 4678899999999998555 58998888 7899999999754 11000 000 0111 11 1111 1224567
Q ss_pred CCCcchhhHHHHHHhHHHHHHHHH
Q psy7978 94 PGGVGPMTVAMLMNNTVLSAERYI 117 (542)
Q Consensus 94 PGGVGpmTvamL~~N~v~aa~~~~ 117 (542)
||-| |.|.+.++.|.+...-..+
T Consensus 332 P~~v-p~tAS~~~s~~l~~~l~~~ 354 (381)
T 3p2y_A 332 PATM-PEHASELYAKNVTALLDLL 354 (381)
T ss_dssp GGGS-HHHHHHHHHHHHHHHHHHH
T ss_pred chhh-HHHHHHHHHHHHHHHHHHH
Confidence 8999 9999988888776554443
No 23
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=95.95 E-value=0.0048 Score=66.34 Aligned_cols=61 Identities=18% Similarity=0.126 Sum_probs=52.2
Q ss_pred CchHHHHHHHhCCCe-eecCC--------------CCCHHHHhhhCCEEEEeccCCCceecCcc---cCCeEEEecccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK--------------TKNIQDVVKSADILVVGIGQPEYVKGDWI---KPGAVVIDCGIN 61 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~--------------T~nl~~~~k~ADIVIsAvG~p~lI~~d~i---k~GavVIDVGin 61 (542)
||+.+|.+|...||+ +++.. ..++.+.+++|||||.++|.+++|+.+.+ |+|++||++|-.
T Consensus 258 IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRg 336 (464)
T 3n58_A 258 VGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHF 336 (464)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSS
T ss_pred HHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCC
Confidence 589999999999999 33321 23689999999999999999999998888 999999999964
No 24
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.80 E-value=0.023 Score=60.18 Aligned_cols=88 Identities=19% Similarity=0.344 Sum_probs=54.7
Q ss_pred CHHHHhhhCCEEEEeccCC-----CceecCcc---cCCeEEEeccccccCCCccCCCCeeeeccccccccccce-EeecC
Q psy7978 23 NIQDVVKSADILVVGIGQP-----EYVKGDWI---KPGAVVIDCGINSVPDASKASGQKLVGDVQYAEAKNVAS-WITPV 93 (542)
Q Consensus 23 nl~~~~k~ADIVIsAvG~p-----~lI~~d~i---k~GavVIDVGin~~~d~~~~~~~kl~GDVdf~~v~~~a~-~iTPV 93 (542)
++.+.+++|||||.++..| .+|+.+|+ |+|++|||+.+-+ .++-. ..+ .++. |. ...+.- .++=.
T Consensus 268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~--GG~~e-~t~-~~~~-~~-~~GV~~~gv~nl 341 (405)
T 4dio_A 268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVER--GGNIE-GAE-AGKV-TE-VGGVRIVGHLNV 341 (405)
T ss_dssp HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGG--TCSBT-TCC-TTEE-EE-ETTEEEEECSSG
T ss_pred HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCC--CCCcc-ccC-CCCe-EE-ECCEEEEEeCCC
Confidence 5778889999999998655 58898887 6999999999754 11000 000 0111 11 112212 23445
Q ss_pred CCCcchhhHHHHHHhHHHHHHHHH
Q psy7978 94 PGGVGPMTVAMLMNNTVLSAERYI 117 (542)
Q Consensus 94 PGGVGpmTvamL~~N~v~aa~~~~ 117 (542)
||-+ |.|.+.++.|.+.-+-..+
T Consensus 342 P~~v-p~tAS~~ls~~~~~~l~~l 364 (405)
T 4dio_A 342 AGRI-AASASLLYAKNLVTFLETM 364 (405)
T ss_dssp GGGG-HHHHHHHHHHHHHHHHHTT
T ss_pred CccC-HHHHHHHHHHHHHHHHHHH
Confidence 8888 9999888887665544433
No 25
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=95.50 E-value=0.0093 Score=63.69 Aligned_cols=62 Identities=13% Similarity=0.176 Sum_probs=52.2
Q ss_pred CchHHHHHHHhCCCe--eecCC-------------CCCHHHHhhhCCEEEEeccCCCceecCcc---cCCeEEEeccccc
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSK-------------TKNIQDVVKSADILVVGIGQPEYVKGDWI---KPGAVVIDCGINS 62 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~-------------T~nl~~~~k~ADIVIsAvG~p~lI~~d~i---k~GavVIDVGin~ 62 (542)
||+.++.+|...||+ ++... ..++.+.+++|||||.+.|.+++|+.+++ |+|++||++|-..
T Consensus 231 IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~ 310 (435)
T 3gvp_A 231 VGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSN 310 (435)
T ss_dssp HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCC
Confidence 588999999999999 33321 23688999999999999999999998887 9999999999653
No 26
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=95.44 E-value=0.0098 Score=64.40 Aligned_cols=63 Identities=16% Similarity=0.108 Sum_probs=52.1
Q ss_pred CchHHHHHHHhCCCe-eecCCC--------------CCHHHHhhhCCEEEEeccCCCceecCcc---cCCeEEEeccccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT--------------KNIQDVVKSADILVVGIGQPEYVKGDWI---KPGAVVIDCGINS 62 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T--------------~nl~~~~k~ADIVIsAvG~p~lI~~d~i---k~GavVIDVGin~ 62 (542)
||+.+|.+|...|++ +....+ .++.+.+++|||||.+++.+++|+.+++ |+|++|||+|--.
T Consensus 288 IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~~t~~lI~~~~l~~MK~gAilINvgrg~ 367 (494)
T 3d64_A 288 VGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFD 367 (494)
T ss_dssp HHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECSSSSCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred HHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECCCcccccCHHHHhhCCCCcEEEEcCCCc
Confidence 589999999999998 333222 2688999999999999999999998765 8999999999754
Q ss_pred c
Q psy7978 63 V 63 (542)
Q Consensus 63 ~ 63 (542)
+
T Consensus 368 v 368 (494)
T 3d64_A 368 S 368 (494)
T ss_dssp C
T ss_pred c
Confidence 4
No 27
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=95.15 E-value=0.011 Score=63.80 Aligned_cols=63 Identities=16% Similarity=0.123 Sum_probs=51.4
Q ss_pred CchHHHHHHHhCCCe-eecCCC--------------CCHHHHhhhCCEEEEeccCCCceecCcc---cCCeEEEeccccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT--------------KNIQDVVKSADILVVGIGQPEYVKGDWI---KPGAVVIDCGINS 62 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T--------------~nl~~~~k~ADIVIsAvG~p~lI~~d~i---k~GavVIDVGin~ 62 (542)
||+.+|..|...|++ +....+ .++.+.+++|||||++++.+++|+.+++ |+|++|||+|-..
T Consensus 268 IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~~t~~lI~~~~l~~MK~gailiNvgrg~ 347 (479)
T 1v8b_A 268 VGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFD 347 (479)
T ss_dssp HHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred HHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECCChhhhcCHHHHhhcCCCcEEEEeCCCC
Confidence 589999999988998 333322 2688899999999999999999987655 8999999999654
Q ss_pred c
Q psy7978 63 V 63 (542)
Q Consensus 63 ~ 63 (542)
.
T Consensus 348 ~ 348 (479)
T 1v8b_A 348 D 348 (479)
T ss_dssp T
T ss_pred c
Confidence 3
No 28
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.66 E-value=0.039 Score=48.40 Aligned_cols=41 Identities=22% Similarity=0.470 Sum_probs=35.9
Q ss_pred CCHHHHhhhCCEEEEeccCCC-ceecCcccCCeEEEeccccc
Q psy7978 22 KNIQDVVKSADILVVGIGQPE-YVKGDWIKPGAVVIDCGINS 62 (542)
Q Consensus 22 ~nl~~~~k~ADIVIsAvG~p~-lI~~d~ik~GavVIDVGin~ 62 (542)
.++.+.++++|+||.|+|.+. +++.+|+++|.+|+|+|..+
T Consensus 72 ~~~~~~~~~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 72 NDIDSLIKNNDVIITATSSKTPIVEERSLMPGKLFIDLGNPP 113 (144)
T ss_dssp SCHHHHHHTCSEEEECSCCSSCSBCGGGCCTTCEEEECCSSC
T ss_pred cCHHHHhcCCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCCc
Confidence 467788899999999999986 47889999999999999754
No 29
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=94.52 E-value=0.027 Score=57.14 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=35.6
Q ss_pred CHHHHhhhCCEEEEeccCCC-ceecCcccCCeEEEeccccc
Q psy7978 23 NIQDVVKSADILVVGIGQPE-YVKGDWIKPGAVVIDCGINS 62 (542)
Q Consensus 23 nl~~~~k~ADIVIsAvG~p~-lI~~d~ik~GavVIDVGin~ 62 (542)
++++.+++|||||+|++.+. +++.+|+++|+.|+|+|...
T Consensus 176 ~~~eav~~aDIVi~aT~s~~pvl~~~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 176 APADIAAQADIVVTATRSTTPLFAGQALRAGAFVGAIGSSL 216 (313)
T ss_dssp CHHHHHHHCSEEEECCCCSSCSSCGGGCCTTCEEEECCCSS
T ss_pred CHHHHHhhCCEEEEccCCCCcccCHHHcCCCcEEEECCCCC
Confidence 67888899999999998765 57899999999999999874
No 30
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=94.17 E-value=0.044 Score=55.23 Aligned_cols=62 Identities=6% Similarity=0.115 Sum_probs=49.5
Q ss_pred CchHHHHHHHhCCCe-eecCCC----------CCHHHHhhhCCEEEEeccC----CCceec---CcccCCeEEEeccccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT----------KNIQDVVKSADILVVGIGQ----PEYVKG---DWIKPGAVVIDCGINS 62 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T----------~nl~~~~k~ADIVIsAvG~----p~lI~~---d~ik~GavVIDVGin~ 62 (542)
||+++|..|...|++ +.+.++ .++.+.+++||+|+.++.. .++|.. +.+|+|+++||+|--.
T Consensus 133 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~ 212 (290)
T 3gvx_A 133 IGRRVAHLAKAFGMRVIAYTRSSVDQNVDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARAD 212 (290)
T ss_dssp HHHHHHHHHHHHTCEEEEECSSCCCTTCSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGG
T ss_pred hhHHHHHHHHhhCcEEEEEeccccccccccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhc
Confidence 589999999998988 444433 2799999999999999985 456755 4569999999999654
No 31
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=93.61 E-value=0.65 Score=50.14 Aligned_cols=118 Identities=14% Similarity=0.129 Sum_probs=73.5
Q ss_pred CchHHHHHHHhCCCe-eecCCCC-------------CHHHHhhhCCEEEEeccCC----Cceec---CcccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK-------------NIQDVVKSADILVVGIGQP----EYVKG---DWIKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~-------------nl~~~~k~ADIVIsAvG~p----~lI~~---d~ik~GavVIDVG 59 (542)
||+.+|..|...|.+ +.+..+. ++.+.+++||+|+.++... +++.. ..+|+|++|||+|
T Consensus 153 IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~a 232 (529)
T 1ygy_A 153 IGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAA 232 (529)
T ss_dssp HHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred HHHHHHHHHHhCCCEEEEECCCCChhHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECC
Confidence 589999999988888 4433321 5778899999999999764 57765 4679999999999
Q ss_pred ccccCCCcc-----CCCCeeee---ccc-------cccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 60 INSVPDASK-----ASGQKLVG---DVQ-------YAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 60 in~~~d~~~-----~~~~kl~G---DVd-------f~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
--.+-+... ++| ++.| ||- -+-....--.+||-+||.-+-+..-....+++...+.+..
T Consensus 233 rg~iv~~~aL~~al~~g-~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~ 306 (529)
T 1ygy_A 233 RGGLVDEAALADAITGG-HVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAG 306 (529)
T ss_dssp CTTSBCHHHHHHHHHTS-SEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCchhhHHHHHHHHHcC-CccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 543322210 111 3322 431 0111222345899999887776655444444444444443
No 32
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=93.61 E-value=0.083 Score=53.54 Aligned_cols=105 Identities=10% Similarity=0.130 Sum_probs=67.4
Q ss_pred CchHHHHHHHhCCCe-eecCC-C--------------CCHHHHhhhCCEEEEeccC----CCceec---CcccCCeEEEe
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK-T--------------KNIQDVVKSADILVVGIGQ----PEYVKG---DWIKPGAVVID 57 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~-T--------------~nl~~~~k~ADIVIsAvG~----p~lI~~---d~ik~GavVID 57 (542)
||+.++..|...|++ +.+.. + .++.+.+++||+|+.++.. .++++. +.+|+|+++||
T Consensus 157 IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn 236 (320)
T 1gdh_A 157 IGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVN 236 (320)
T ss_dssp HHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEE
Confidence 589999999988888 44443 2 2688889999999999984 356765 56799999999
Q ss_pred ccccccCCCcc-----CCCCeeee---ccc-------cccccccceEeecCCCCcchhhHHHHH
Q psy7978 58 CGINSVPDASK-----ASGQKLVG---DVQ-------YAEAKNVASWITPVPGGVGPMTVAMLM 106 (542)
Q Consensus 58 VGin~~~d~~~-----~~~~kl~G---DVd-------f~~v~~~a~~iTPVPGGVGpmTvamL~ 106 (542)
+|...+-+... +++ ++-| ||- -+-....-..+||-.+|.-.-+..-+.
T Consensus 237 ~arg~~vd~~aL~~aL~~g-~i~gA~lDv~~~eP~~~~~L~~~~nviltPH~~~~t~~~~~~~~ 299 (320)
T 1gdh_A 237 TARGDLVDNELVVAALEAG-RLAYAGFDVFAGEPNINEGYYDLPNTFLFPHIGSAATQAREDMA 299 (320)
T ss_dssp CSCGGGBCHHHHHHHHHHT-SEEEEEESCCTTTTSCCTTGGGCTTEEECSSCTTCBHHHHHHHH
T ss_pred CCCCcccCHHHHHHHHHhC-CCcEEEEeCCCCCCCCCChhhhCCCEEECCcCCcCcHHHHHHHH
Confidence 99764322110 001 3443 441 011222345789988886665543333
No 33
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=93.61 E-value=0.08 Score=54.16 Aligned_cols=63 Identities=14% Similarity=0.236 Sum_probs=49.8
Q ss_pred CchHHHHHHHhCCCe-eecCCC-------------CCHHHHhhhCCEEEEeccC----CCceecCc---ccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT-------------KNIQDVVKSADILVVGIGQ----PEYVKGDW---IKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T-------------~nl~~~~k~ADIVIsAvG~----p~lI~~d~---ik~GavVIDVG 59 (542)
||+++|..|...|++ +.+.++ .++.+.+++||||+.++.. .++|..+. .|+|+++||+|
T Consensus 151 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~a 230 (324)
T 3hg7_A 151 IGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVG 230 (324)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECS
T ss_pred HHHHHHHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECC
Confidence 589999999999988 444332 2588999999999999884 35787665 48999999999
Q ss_pred cccc
Q psy7978 60 INSV 63 (542)
Q Consensus 60 in~~ 63 (542)
--.+
T Consensus 231 RG~~ 234 (324)
T 3hg7_A 231 RGNA 234 (324)
T ss_dssp CGGG
T ss_pred Cchh
Confidence 6543
No 34
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=93.56 E-value=0.22 Score=50.94 Aligned_cols=116 Identities=13% Similarity=0.110 Sum_probs=73.2
Q ss_pred CchHHHHHHHhCCCe-eecCCC-------------CCHHHHhhhCCEEEEeccCC----Cceec---CcccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT-------------KNIQDVVKSADILVVGIGQP----EYVKG---DWIKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T-------------~nl~~~~k~ADIVIsAvG~p----~lI~~---d~ik~GavVIDVG 59 (542)
||+++|..|...|+. +.+..+ .++.+.+++||+|+.++... ++|+. +.+|+|+++||+|
T Consensus 176 IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 255 (335)
T 2g76_A 176 IGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCA 255 (335)
T ss_dssp HHHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECC
Confidence 589999999988888 444332 25788999999999999865 46754 4569999999999
Q ss_pred ccccCCCcc-----CCCCeeee---ccccc------c-ccccceEeecCCCCcchhhHHHHHHhHHHHHHHHH
Q psy7978 60 INSVPDASK-----ASGQKLVG---DVQYA------E-AKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYI 117 (542)
Q Consensus 60 in~~~d~~~-----~~~~kl~G---DVdf~------~-v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~ 117 (542)
.-.+-|+.. ++| ++.| ||-.. . ....-..+||-.+|.-.-+..-+.+.+++..++.+
T Consensus 256 rg~vvd~~aL~~aL~~g-~i~gA~lDV~~~EP~~~~~L~~~~nvilTPH~~~~t~e~~~~~~~~~~~nl~~~~ 327 (335)
T 2g76_A 256 RGGIVDEGALLRALQSG-QCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMV 327 (335)
T ss_dssp CTTSBCHHHHHHHHHHT-SEEEEEESCCSSSSCSCCHHHHSTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHC
T ss_pred CccccCHHHHHHHHHhC-CccEEEEeecCCCCCCCchHHhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 865433210 011 4543 55111 1 11223568999888766665444444444444433
No 35
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=93.43 E-value=0.068 Score=55.13 Aligned_cols=118 Identities=18% Similarity=0.148 Sum_probs=75.3
Q ss_pred CchHHHHHHHhCCCe-eecCCC-------------CCHHHHhhhCCEEEEeccC----CCceecCc---ccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT-------------KNIQDVVKSADILVVGIGQ----PEYVKGDW---IKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T-------------~nl~~~~k~ADIVIsAvG~----p~lI~~d~---ik~GavVIDVG 59 (542)
||+.+|..|...|+. +.+.++ .++.+.+++||||+.++.. .++|..+. .|+|+++||+|
T Consensus 184 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~a 263 (345)
T 4g2n_A 184 IGRAIATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINIS 263 (345)
T ss_dssp HHHHHHHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECS
T ss_pred hHHHHHHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECC
Confidence 589999999998988 555443 3789999999999999985 47887765 58999999999
Q ss_pred ccccCCCcc-----CCCCeeee---cccccc------c-cccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 60 INSVPDASK-----ASGQKLVG---DVQYAE------A-KNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 60 in~~~d~~~-----~~~~kl~G---DVdf~~------v-~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
--.+-|+.. ++| ++.| ||-..+ . .-.-..+||=-||.-.-+..-+.+.+++...+.+..
T Consensus 264 RG~~vde~aL~~aL~~g-~i~gA~LDVf~~EP~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~l~g 337 (345)
T 4g2n_A 264 RGDLINDDALIEALRSK-HLFAAGLDVFANEPAIDPRYRSLDNIFLTPHIGSATHETRDAMGWLLIQGIEALNQS 337 (345)
T ss_dssp CGGGBCHHHHHHHHHHT-SEEEEEESCCTTTTSCCTTGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCchhCHHHHHHHHHhC-CceEEEecCCCCCCCCCchHHhCCCEEEcCccCcCCHHHHHHHHHHHHHHHHHHHcC
Confidence 544322110 011 4555 552111 1 111256889877766555555544444444444443
No 36
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=93.31 E-value=0.07 Score=55.03 Aligned_cols=62 Identities=18% Similarity=0.236 Sum_probs=50.2
Q ss_pred CchHHHHHHHhCCCe-eecCCCC-----------CHHHHhhhCCEEEEeccC----CCceecCc---ccCCeEEEecccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK-----------NIQDVVKSADILVVGIGQ----PEYVKGDW---IKPGAVVIDCGIN 61 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~-----------nl~~~~k~ADIVIsAvG~----p~lI~~d~---ik~GavVIDVGin 61 (542)
||+++|..|...|++ +.+..++ ++.+.+++||||+.++.. .++|..+. .|+|+++||+|--
T Consensus 159 IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg 238 (343)
T 2yq5_A 159 IGSAVAEIFSAMGAKVIAYDVAYNPEFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARG 238 (343)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCGGGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred HHHHHHHHHhhCCCEEEEECCChhhhhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCC
Confidence 589999999999998 4444332 688999999999999985 56787765 4899999999965
Q ss_pred c
Q psy7978 62 S 62 (542)
Q Consensus 62 ~ 62 (542)
.
T Consensus 239 ~ 239 (343)
T 2yq5_A 239 E 239 (343)
T ss_dssp G
T ss_pred h
Confidence 4
No 37
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=93.23 E-value=0.43 Score=48.15 Aligned_cols=118 Identities=18% Similarity=0.196 Sum_probs=74.0
Q ss_pred CchHHHHHHHhCCCe-eecCCC--------CCHHHHhhhCCEEEEeccCC----Cceec---CcccCCeEEEeccccccC
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT--------KNIQDVVKSADILVVGIGQP----EYVKG---DWIKPGAVVIDCGINSVP 64 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T--------~nl~~~~k~ADIVIsAvG~p----~lI~~---d~ik~GavVIDVGin~~~ 64 (542)
||+.++..|...|+. +.+.++ .++.+.+++||+|+.++... ++++. ..+|+|+++||+|...+-
T Consensus 155 IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~v 234 (311)
T 2cuk_A 155 IGQAVAKRALAFGMRVVYHARTPKPLPYPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALV 234 (311)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCSSSSCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGB
T ss_pred HHHHHHHHHHHCCCEEEEECCCCcccccccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCcc
Confidence 589999999999988 444333 26889999999999998654 56653 357999999999986543
Q ss_pred CCcc----CCCCeeee---ccccc-------c-ccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 65 DASK----ASGQKLVG---DVQYA-------E-AKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 65 d~~~----~~~~kl~G---DVdf~-------~-v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
+... -.| ++-| ||-.. . ....-..+||-.+|.-.-+..-+.+.+++...+.+..
T Consensus 235 d~~aL~~aL~g-~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g 303 (311)
T 2cuk_A 235 DTEALVEALRG-HLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVLEG 303 (311)
T ss_dssp CHHHHHHHHTT-TSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHhC-cCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 3210 001 3322 55210 1 1223467899988876655544444444444444433
No 38
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=92.89 E-value=0.073 Score=54.37 Aligned_cols=118 Identities=15% Similarity=0.150 Sum_probs=73.8
Q ss_pred CchHHHHHHHhCCCe-eecCCCC--------------CHHHHhhhCCEEEEeccC----CCceecCc---ccCCeEEEec
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK--------------NIQDVVKSADILVVGIGQ----PEYVKGDW---IKPGAVVIDC 58 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~--------------nl~~~~k~ADIVIsAvG~----p~lI~~d~---ik~GavVIDV 58 (542)
||+.+|..|...|++ +.+..++ ++.+.+++||+|+.++.. .++|..+. +|+|+++||+
T Consensus 156 IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~ 235 (330)
T 4e5n_A 156 IGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNP 235 (330)
T ss_dssp HHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEEC
Confidence 589999999988988 5554432 578899999999999984 45787544 5899999999
Q ss_pred cccccCCCcc-----CCCCeee---ecccccc---------------ccccceEeecCCCCcchhhHHHHHHhHHHHHHH
Q psy7978 59 GINSVPDASK-----ASGQKLV---GDVQYAE---------------AKNVASWITPVPGGVGPMTVAMLMNNTVLSAER 115 (542)
Q Consensus 59 Gin~~~d~~~-----~~~~kl~---GDVdf~~---------------v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~ 115 (542)
|--.+-|+.. ++| ++. =||-..+ ..-.-..+||=-||.-.-+..-+.+.+++...+
T Consensus 236 arg~~vd~~aL~~aL~~g-~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~ 314 (330)
T 4e5n_A 236 CRGSVVDEAAVLAALERG-QLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNILQ 314 (330)
T ss_dssp SCGGGBCHHHHHHHHHHT-SEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCchhCHHHHHHHHHhC-CccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCChHHHHHHHHHHHHHHHHH
Confidence 9654322110 001 333 2552111 011135689987776655555555555554444
Q ss_pred HHhh
Q psy7978 116 YIDR 119 (542)
Q Consensus 116 ~~~~ 119 (542)
.+..
T Consensus 315 ~~~g 318 (330)
T 4e5n_A 315 ALAG 318 (330)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 4444
No 39
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.86 E-value=0.26 Score=50.79 Aligned_cols=39 Identities=26% Similarity=0.580 Sum_probs=31.6
Q ss_pred HHHHhhhCCEEEEec---cC--CCceecCc---ccCCeEEEeccccc
Q psy7978 24 IQDVVKSADILVVGI---GQ--PEYVKGDW---IKPGAVVIDCGINS 62 (542)
Q Consensus 24 l~~~~k~ADIVIsAv---G~--p~lI~~d~---ik~GavVIDVGin~ 62 (542)
+.+.++.|||||.++ |. |++++.++ .|+|++|||+|+.+
T Consensus 251 l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~ 297 (384)
T 1l7d_A 251 VLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEA 297 (384)
T ss_dssp HHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGG
T ss_pred HHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCC
Confidence 677888999999999 64 45777644 48999999999764
No 40
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.79 E-value=0.099 Score=52.27 Aligned_cols=97 Identities=11% Similarity=0.111 Sum_probs=63.4
Q ss_pred CchHHHHHHHhCCC-e-eecCCCC----------------CHHHHhhhCCEEEEeccC---CC---ceecCcccCCeEEE
Q psy7978 1 MWSSLQTFWLWVLA-N-PSMSKTK----------------NIQDVVKSADILVVGIGQ---PE---YVKGDWIKPGAVVI 56 (542)
Q Consensus 1 vgkPLa~LL~~~~A-T-icHs~T~----------------nl~~~~k~ADIVIsAvG~---p~---lI~~d~ik~GavVI 56 (542)
+|++++..|.+.|+ . .+.++|. ++.+.++++||||.+++. |. .++.++++++.+|+
T Consensus 128 ~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~l~~~~l~~~~~V~ 207 (277)
T 3don_A 128 ASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVS 207 (277)
T ss_dssp HHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CCSSCCTTCCSSCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcCCCCHHHcCCCCEEE
Confidence 37899999999999 4 3444442 244557899999999865 22 26789999999999
Q ss_pred eccccccCCCccCCCCeeeeccccc-cccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHh
Q psy7978 57 DCGINSVPDASKASGQKLVGDVQYA-EAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYID 118 (542)
Q Consensus 57 DVGin~~~d~~~~~~~kl~GDVdf~-~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~ 118 (542)
|+-.+..+ + .|- .+++ .++ +-+.| .-||+.+...+.+.+.+
T Consensus 208 D~vY~P~~--T-----------~ll~~A~~-~G~-~~~~G------l~MLv~Qa~~~f~lwtg 249 (277)
T 3don_A 208 DIVYNPYK--T-----------PILIEAEQ-RGN-PIYNG------LDMFVHQGAESFKIWTN 249 (277)
T ss_dssp ESCCSSSS--C-----------HHHHHHHH-TTC-CEECT------HHHHHHHHHHHHHHHHS
T ss_pred EecCCCCC--C-----------HHHHHHHH-CcC-EEeCC------HHHHHHHHHHHHHHHcC
Confidence 99877521 1 232 2222 232 22333 67998888877766554
No 41
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=92.67 E-value=0.11 Score=52.42 Aligned_cols=63 Identities=5% Similarity=0.124 Sum_probs=49.4
Q ss_pred CchHHHHHHHhCCCe-eecCCCC-------------CHHHHhhhCCEEEEecc----CCCceecC---cccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK-------------NIQDVVKSADILVVGIG----QPEYVKGD---WIKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~-------------nl~~~~k~ADIVIsAvG----~p~lI~~d---~ik~GavVIDVG 59 (542)
||++++..|...|++ +.+.+++ ++.+.+++||+|+.++. ..++++.+ .+|+|+++||+|
T Consensus 153 IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~a 232 (313)
T 2ekl_A 153 IGTKVGIIANAMGMKVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTS 232 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESS
T ss_pred HHHHHHHHHHHCCCEEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECC
Confidence 589999999999988 4444332 57788999999999998 44677543 469999999999
Q ss_pred cccc
Q psy7978 60 INSV 63 (542)
Q Consensus 60 in~~ 63 (542)
...+
T Consensus 233 rg~~ 236 (313)
T 2ekl_A 233 RAVA 236 (313)
T ss_dssp CGGG
T ss_pred CCcc
Confidence 8654
No 42
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=92.67 E-value=0.066 Score=54.70 Aligned_cols=117 Identities=16% Similarity=0.135 Sum_probs=72.4
Q ss_pred CchHHHHHHHhCCCe-eecCCC-------------CCHHHHhhhCCEEEEeccC----CCceecCc---ccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT-------------KNIQDVVKSADILVVGIGQ----PEYVKGDW---IKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T-------------~nl~~~~k~ADIVIsAvG~----p~lI~~d~---ik~GavVIDVG 59 (542)
||+++|..|...|++ +.+.++ .++.+.+++||+|+.++.- .++|..+. .|+|+++||+|
T Consensus 148 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~a 227 (324)
T 3evt_A 148 IGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIG 227 (324)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECS
T ss_pred HHHHHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcC
Confidence 589999999999988 433322 2578899999999999874 46777654 58999999999
Q ss_pred ccccCCCcc-----CCCCeeee---cccccc-------c-cccceEeecCCCCcchhhHHHHHHhHHHHHHHHHh
Q psy7978 60 INSVPDASK-----ASGQKLVG---DVQYAE-------A-KNVASWITPVPGGVGPMTVAMLMNNTVLSAERYID 118 (542)
Q Consensus 60 in~~~d~~~-----~~~~kl~G---DVdf~~-------v-~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~ 118 (542)
--.+-|+.. ++| ++.| ||-..+ . .-.-..+||=-||.-.-+..-+.+.+++..++.+.
T Consensus 228 RG~~vd~~aL~~aL~~g-~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~l~ 301 (324)
T 3evt_A 228 RGPAVDTTALMTALDHH-QLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAHFRATVFPIFAANFAQFVK 301 (324)
T ss_dssp CGGGBCHHHHHHHHHTT-SCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhHHHHHHHHHhC-CceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChHHHHHHHHHHHHHHHHHHHh
Confidence 654322110 011 3433 662111 1 11134689988887654444444444444444443
No 43
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=92.61 E-value=0.094 Score=53.32 Aligned_cols=62 Identities=8% Similarity=0.103 Sum_probs=48.7
Q ss_pred CchHHHHHHHhCCCe-eecCCC-------------CCHHHHhhhCCEEEEeccC----CCceecCc---ccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT-------------KNIQDVVKSADILVVGIGQ----PEYVKGDW---IKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T-------------~nl~~~~k~ADIVIsAvG~----p~lI~~d~---ik~GavVIDVG 59 (542)
||+.+|..|...|+. +.+.++ .++.+.+++||||+.++.- .++|+.+. +|+|+++||+|
T Consensus 150 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 229 (315)
T 3pp8_A 150 LGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLA 229 (315)
T ss_dssp HHHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECC
Confidence 589999999988988 444333 2588999999999999873 46786554 68999999999
Q ss_pred ccc
Q psy7978 60 INS 62 (542)
Q Consensus 60 in~ 62 (542)
--.
T Consensus 230 RG~ 232 (315)
T 3pp8_A 230 RGV 232 (315)
T ss_dssp CGG
T ss_pred CCh
Confidence 554
No 44
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=92.51 E-value=0.51 Score=48.69 Aligned_cols=118 Identities=13% Similarity=0.083 Sum_probs=75.4
Q ss_pred CchHHHHHHHhCCCe-eecCCC--------------CCHHHHhhhCCEEEEeccC----CCceecCc---ccCCeEEEec
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT--------------KNIQDVVKSADILVVGIGQ----PEYVKGDW---IKPGAVVIDC 58 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T--------------~nl~~~~k~ADIVIsAvG~----p~lI~~d~---ik~GavVIDV 58 (542)
||+++|..|...|++ +.+..+ .++.+.+++||+|+.++.. .++|..+. +|+|+++||+
T Consensus 171 IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~ 250 (352)
T 3gg9_A 171 IGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNT 250 (352)
T ss_dssp HHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEEC
T ss_pred HHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEEC
Confidence 589999999999988 444332 3789999999999999974 35777554 5899999999
Q ss_pred cccccCCCcc-----CCCCeeee---cccc-cc-------ccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 59 GINSVPDASK-----ASGQKLVG---DVQY-AE-------AKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 59 Gin~~~d~~~-----~~~~kl~G---DVdf-~~-------v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
|--.+-|+.. ++| ++.| ||-. |- ..-.-..+||=-||.-.-+...+.+.+++..++.+..
T Consensus 251 aRg~~vd~~aL~~aL~~g-~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~G 326 (352)
T 3gg9_A 251 SRAELVEENGMVTALNRG-RPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYVERESYEMYFGIAFQNILDILQG 326 (352)
T ss_dssp SCGGGBCTTHHHHHHHHT-SSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCchhhcHHHHHHHHHhC-CccEEEecccCCCCCCCCChhhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 9554323210 001 2332 4421 10 1112357899888877766666655555555555544
No 45
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=92.49 E-value=0.13 Score=51.78 Aligned_cols=63 Identities=17% Similarity=0.228 Sum_probs=49.5
Q ss_pred CchHHHHHHHhCCCe-eecCCC---------CCHHHHhhhCCEEEEeccCC----Cceec---CcccCCeEEEecccccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT---------KNIQDVVKSADILVVGIGQP----EYVKG---DWIKPGAVVIDCGINSV 63 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T---------~nl~~~~k~ADIVIsAvG~p----~lI~~---d~ik~GavVIDVGin~~ 63 (542)
||+.+|..|...|++ +.+.++ .++.+.+++||+|+.++... ++|+. ..+|+|+++||+|...+
T Consensus 135 IG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~ 214 (303)
T 1qp8_A 135 IGTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEV 214 (303)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred HHHHHHHHHHHCCCEEEEECCCccccCcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcc
Confidence 589999999999988 444432 36889999999999999654 46764 45689999999997654
No 46
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=92.21 E-value=0.13 Score=52.39 Aligned_cols=63 Identities=16% Similarity=0.258 Sum_probs=48.7
Q ss_pred CchHHHHHHHhCCCe-eecCCCC-----------CHHHHhhhCCEEEEeccCC----CceecC---cccCCeEEEecccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK-----------NIQDVVKSADILVVGIGQP----EYVKGD---WIKPGAVVIDCGIN 61 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~-----------nl~~~~k~ADIVIsAvG~p----~lI~~d---~ik~GavVIDVGin 61 (542)
||+.++..|...|+. +.+..+. ++.+.+++||+|+.++... ++|+.+ .+|+|+++||+|-.
T Consensus 157 IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg 236 (331)
T 1xdw_A 157 IGRVAAQIFHGMGATVIGEDVFEIKGIEDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARG 236 (331)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCCSCTTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCG
T ss_pred HHHHHHHHHHHCCCEEEEECCCccHHHHhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCc
Confidence 589999999999998 4443322 5889999999999998853 567543 46999999999965
Q ss_pred cc
Q psy7978 62 SV 63 (542)
Q Consensus 62 ~~ 63 (542)
.+
T Consensus 237 ~~ 238 (331)
T 1xdw_A 237 QL 238 (331)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 47
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=92.19 E-value=0.13 Score=51.72 Aligned_cols=63 Identities=11% Similarity=0.162 Sum_probs=49.2
Q ss_pred CchHHHHHHHhCCCe-eecCCCC-------------CHHHHhhhCCEEEEeccC----CCceecC---cccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK-------------NIQDVVKSADILVVGIGQ----PEYVKGD---WIKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~-------------nl~~~~k~ADIVIsAvG~----p~lI~~d---~ik~GavVIDVG 59 (542)
||++++..|...|++ +.+..++ ++.+.+++||+|+.++.. .++|+.+ .+|+|+++||+|
T Consensus 153 IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~a 232 (307)
T 1wwk_A 153 IGYQVAKIANALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTS 232 (307)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECC
Confidence 589999999999988 4443322 577889999999999984 4577644 469999999999
Q ss_pred cccc
Q psy7978 60 INSV 63 (542)
Q Consensus 60 in~~ 63 (542)
...+
T Consensus 233 rg~~ 236 (307)
T 1wwk_A 233 RGPV 236 (307)
T ss_dssp CGGG
T ss_pred CCcc
Confidence 8654
No 48
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=92.14 E-value=0.13 Score=53.22 Aligned_cols=63 Identities=10% Similarity=0.199 Sum_probs=49.6
Q ss_pred CchHHHHHHHhCCCe-eecCCC---------------CCHHHHhhhCCEEEEeccC----CCceecCc---ccCCeEEEe
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT---------------KNIQDVVKSADILVVGIGQ----PEYVKGDW---IKPGAVVID 57 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T---------------~nl~~~~k~ADIVIsAvG~----p~lI~~d~---ik~GavVID 57 (542)
||+.++..|...|+. +.+.++ .++.+.+++||||+.++.. .++|+.+. +|+|+++||
T Consensus 175 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN 254 (351)
T 3jtm_A 175 IGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVN 254 (351)
T ss_dssp HHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEE
Confidence 589999999988988 444332 3789999999999999984 35777655 589999999
Q ss_pred cccccc
Q psy7978 58 CGINSV 63 (542)
Q Consensus 58 VGin~~ 63 (542)
+|--.+
T Consensus 255 ~aRG~~ 260 (351)
T 3jtm_A 255 NARGAI 260 (351)
T ss_dssp CSCGGG
T ss_pred CcCchh
Confidence 996543
No 49
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=92.06 E-value=0.14 Score=52.49 Aligned_cols=62 Identities=13% Similarity=0.236 Sum_probs=49.0
Q ss_pred CchHHHHHHHhCCCe-eecCCCC------------CHHHHhhhCCEEEEeccC----CCceecCc---ccCCeEEEeccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK------------NIQDVVKSADILVVGIGQ----PEYVKGDW---IKPGAVVIDCGI 60 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~------------nl~~~~k~ADIVIsAvG~----p~lI~~d~---ik~GavVIDVGi 60 (542)
||+++|..|...|++ +.+..++ ++.+.+++||||+.++.. .++|..+. +|+|+++||+|-
T Consensus 152 IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aR 231 (334)
T 2pi1_A 152 IGSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTAR 231 (334)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSC
T ss_pred HHHHHHHHHHHCcCEEEEECCCcchhhHhcCceecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCC
Confidence 589999999999998 4444332 478899999999999874 45777654 589999999996
Q ss_pred cc
Q psy7978 61 NS 62 (542)
Q Consensus 61 n~ 62 (542)
-.
T Consensus 232 g~ 233 (334)
T 2pi1_A 232 GK 233 (334)
T ss_dssp GG
T ss_pred Cc
Confidence 54
No 50
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.74 E-value=0.14 Score=55.45 Aligned_cols=62 Identities=15% Similarity=0.098 Sum_probs=49.3
Q ss_pred CchHHHHHHHhCCCe-eecCCC--------------CCHHHHhhhCCEEEEeccCCCceec---CcccCCeEEEeccccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT--------------KNIQDVVKSADILVVGIGQPEYVKG---DWIKPGAVVIDCGINS 62 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T--------------~nl~~~~k~ADIVIsAvG~p~lI~~---d~ik~GavVIDVGin~ 62 (542)
||+-++.+|...|++ ++...+ .++.+.++.+|+||.++|.++++.. +.+|+|++|+++|...
T Consensus 285 IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 285 VGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD 364 (494)
T ss_dssp HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 578888888888988 333322 2567788999999999999999885 5579999999999753
No 51
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=91.61 E-value=0.17 Score=51.61 Aligned_cols=63 Identities=16% Similarity=0.280 Sum_probs=49.1
Q ss_pred CchHHHHHHHhCCCe-eecCCCC-----------CHHHHhhhCCEEEEeccC----CCceec---CcccCCeEEEecccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK-----------NIQDVVKSADILVVGIGQ----PEYVKG---DWIKPGAVVIDCGIN 61 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~-----------nl~~~~k~ADIVIsAvG~----p~lI~~---d~ik~GavVIDVGin 61 (542)
||++++..|...|++ +.+..++ ++.+.+++||+|+.++.. .++|+. ..+|+|+++||+|..
T Consensus 156 IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg 235 (333)
T 1dxy_A 156 IGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARP 235 (333)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCT
T ss_pred HHHHHHHHHHHCCCEEEEECCCcchhhHhccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCC
Confidence 589999999999998 4443321 588999999999999985 356764 346999999999976
Q ss_pred cc
Q psy7978 62 SV 63 (542)
Q Consensus 62 ~~ 63 (542)
.+
T Consensus 236 ~~ 237 (333)
T 1dxy_A 236 NL 237 (333)
T ss_dssp TS
T ss_pred cc
Confidence 54
No 52
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=91.60 E-value=0.17 Score=51.59 Aligned_cols=63 Identities=11% Similarity=0.167 Sum_probs=48.9
Q ss_pred CchHHHHHHHhCCCe-eecCCC------------CCHHHHhhhCCEEEEeccC----CCceec---CcccCCeEEEeccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT------------KNIQDVVKSADILVVGIGQ----PEYVKG---DWIKPGAVVIDCGI 60 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T------------~nl~~~~k~ADIVIsAvG~----p~lI~~---d~ik~GavVIDVGi 60 (542)
||+.++..|...|+. +.+..+ .++.+.+++||+|+.++.. .++|+. +.+|+|+++||+|.
T Consensus 157 IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~ar 236 (333)
T 1j4a_A 157 IGQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSR 236 (333)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred HHHHHHHHHHHCCCEEEEECCCcchhHHhhCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCC
Confidence 589999999998988 444332 2688899999999999984 356754 34699999999997
Q ss_pred ccc
Q psy7978 61 NSV 63 (542)
Q Consensus 61 n~~ 63 (542)
-.+
T Consensus 237 g~~ 239 (333)
T 1j4a_A 237 GPL 239 (333)
T ss_dssp GGG
T ss_pred Ccc
Confidence 654
No 53
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=91.56 E-value=0.14 Score=52.76 Aligned_cols=118 Identities=16% Similarity=0.198 Sum_probs=66.4
Q ss_pred CchHHHHHHHhCCCe-eecCCC----------CCHHHHhhhCCEEEEeccC----CCceecCc---ccCCeEEEeccccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT----------KNIQDVVKSADILVVGIGQ----PEYVKGDW---IKPGAVVIDCGINS 62 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T----------~nl~~~~k~ADIVIsAvG~----p~lI~~d~---ik~GavVIDVGin~ 62 (542)
||+.+|..|...|.. +.+.++ .++.+.+++||+|+.++.. .++|..+. +|+|+++||++--.
T Consensus 182 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~ 261 (340)
T 4dgs_A 182 IGRALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGN 261 (340)
T ss_dssp HHHHHHHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC-
T ss_pred HHHHHHHHHHHCCCEEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCc
Confidence 589999999988888 444332 3789999999999999983 45676554 58999999998654
Q ss_pred cCCCcc-----CCCCeeee---cccccc------c-cccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 63 VPDASK-----ASGQKLVG---DVQYAE------A-KNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 63 ~~d~~~-----~~~~kl~G---DVdf~~------v-~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
+-|+.. ++| ++.| ||-..+ . .-.-..+||=-||.-.-+..-+.+.+++...+.+..
T Consensus 262 vvde~aL~~aL~~g-~i~gA~LDVf~~EP~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~g 332 (340)
T 4dgs_A 262 VVDEDALIEALKSG-TIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQGSATVETRMAMGKLVLANLAAHFAG 332 (340)
T ss_dssp -------------C-CSSEEEESCCSSSSSCCSHHHHSSSEEECSSCSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCHHHHHHHHHcC-CceEEEeCCcCCCCCCccchhhCCCEEEcCcCCcCCHHHHHHHHHHHHHHHHHHHcC
Confidence 422210 111 3333 662111 0 011246888877766555444444444444444433
No 54
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.16 E-value=0.17 Score=53.37 Aligned_cols=37 Identities=19% Similarity=0.393 Sum_probs=33.8
Q ss_pred CCHHHHhhhCCEEEEeccCCCceecCccc---CCeEEEecc
Q psy7978 22 KNIQDVVKSADILVVGIGQPEYVKGDWIK---PGAVVIDCG 59 (542)
Q Consensus 22 ~nl~~~~k~ADIVIsAvG~p~lI~~d~ik---~GavVIDVG 59 (542)
.+|.+.++.||++|.+.+ |++|++|||+ ++.+|+|..
T Consensus 255 ~~L~eav~~ADVlIG~Sa-p~l~t~emVk~Ma~~pIIfalS 294 (388)
T 1vl6_A 255 GDLETALEGADFFIGVSR-GNILKPEWIKKMSRKPVIFALA 294 (388)
T ss_dssp SCHHHHHTTCSEEEECSC-SSCSCHHHHTTSCSSCEEEECC
T ss_pred hhHHHHHccCCEEEEeCC-CCccCHHHHHhcCCCCEEEEcC
Confidence 469999999999999999 9999999996 577999988
No 55
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=90.95 E-value=0.26 Score=50.94 Aligned_cols=63 Identities=16% Similarity=0.160 Sum_probs=49.5
Q ss_pred CchHHHHHHHhCCCe--eecCCC---------------CCHHHHhhhCCEEEEeccCC----Cceec---CcccCCeEEE
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSKT---------------KNIQDVVKSADILVVGIGQP----EYVKG---DWIKPGAVVI 56 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~T---------------~nl~~~~k~ADIVIsAvG~p----~lI~~---d~ik~GavVI 56 (542)
||+.++..|...|++ +.+.++ .++.+.+++||||+.++.-. ++|+. ..+|+|+++|
T Consensus 175 IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lI 254 (364)
T 2j6i_A 175 IGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLV 254 (364)
T ss_dssp HHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEE
T ss_pred HHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEE
Confidence 588999999888884 333322 36889999999999999876 67865 4579999999
Q ss_pred ecccccc
Q psy7978 57 DCGINSV 63 (542)
Q Consensus 57 DVGin~~ 63 (542)
|+|-..+
T Consensus 255 n~arG~~ 261 (364)
T 2j6i_A 255 NTARGAI 261 (364)
T ss_dssp ECSCGGG
T ss_pred ECCCCch
Confidence 9997654
No 56
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=90.65 E-value=0.31 Score=50.14 Aligned_cols=118 Identities=14% Similarity=0.145 Sum_probs=72.6
Q ss_pred CchHHHHHHHhCCCe-eecCCC--------------CCHHHHhhhCCEEEEeccCC----Cceec---CcccCCeEEEec
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT--------------KNIQDVVKSADILVVGIGQP----EYVKG---DWIKPGAVVIDC 58 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T--------------~nl~~~~k~ADIVIsAvG~p----~lI~~---d~ik~GavVIDV 58 (542)
||++++..|...|+. +.+..+ .++.+.+++||||+.++.-. ++|+. ..+|+|+++||+
T Consensus 179 IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~ 258 (347)
T 1mx3_A 179 VGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNT 258 (347)
T ss_dssp HHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEEC
Confidence 589999999988988 444332 26888999999999998753 46754 356899999999
Q ss_pred cccccCCCcc-----CCCCeeee---ccccc--------cccc-cceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 59 GINSVPDASK-----ASGQKLVG---DVQYA--------EAKN-VASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 59 Gin~~~d~~~-----~~~~kl~G---DVdf~--------~v~~-~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
+....-++.. ++| ++.| ||-.. .+.. .-..+||--+|...-+..-+.+.+++..++.+..
T Consensus 259 arg~~vd~~aL~~aL~~g-~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~~~~~~~ni~~~~~g 335 (347)
T 1mx3_A 259 ARGGLVDEKALAQALKEG-RIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITG 335 (347)
T ss_dssp SCTTSBCHHHHHHHHHHT-SEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCChHHhHHHHHHHHHhC-CCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9875433210 001 3332 44210 0111 1345788777766666555555555544444443
No 57
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.43 E-value=0.21 Score=52.19 Aligned_cols=39 Identities=23% Similarity=0.432 Sum_probs=31.5
Q ss_pred HHHHhhhCCEEEEeccCC-----CceecCcc---cCCeEEEeccccc
Q psy7978 24 IQDVVKSADILVVGIGQP-----EYVKGDWI---KPGAVVIDCGINS 62 (542)
Q Consensus 24 l~~~~k~ADIVIsAvG~p-----~lI~~d~i---k~GavVIDVGin~ 62 (542)
+.+.++.|||||.+++.| .+++.+++ |+|++|||+|+.+
T Consensus 249 l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~ 295 (401)
T 1x13_A 249 FAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQN 295 (401)
T ss_dssp HHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGG
T ss_pred HHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCC
Confidence 677888999999997554 67876555 7999999999754
No 58
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=90.43 E-value=0.35 Score=48.09 Aligned_cols=100 Identities=11% Similarity=0.078 Sum_probs=63.1
Q ss_pred CchHHHHHHHhCCC-e-eecCCCCC----HHH--------------Hh-hhCCEEEEeccCC-----CceecCcccCCeE
Q psy7978 1 MWSSLQTFWLWVLA-N-PSMSKTKN----IQD--------------VV-KSADILVVGIGQP-----EYVKGDWIKPGAV 54 (542)
Q Consensus 1 vgkPLa~LL~~~~A-T-icHs~T~n----l~~--------------~~-k~ADIVIsAvG~p-----~lI~~d~ik~Gav 54 (542)
+|++++..|.+.|+ + .+.++|.+ +.+ .- +++||||+|++.. -.++.++++++.+
T Consensus 131 ~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~~~~~~i~~~~l~~~~~ 210 (272)
T 3pwz_A 131 AVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLTADLPPLPADVLGEAAL 210 (272)
T ss_dssp HHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGGTCCCCCCGGGGTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCCCCCCCCCHHHhCcCCE
Confidence 36889999999997 4 44455532 111 11 5799999998753 1468899999999
Q ss_pred EEeccccccCCCccCCCCeeeeccccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 55 VIDCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 55 VIDVGin~~~d~~~~~~~kl~GDVdf~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
|+|+-.+..+ + .|-...+..+.-.-+. | .-||+.+...+.+.+.+.
T Consensus 211 V~DlvY~P~~--T-----------~ll~~A~~~G~~~~~~-G-----l~ML~~Qa~~~f~lwtg~ 256 (272)
T 3pwz_A 211 AYELAYGKGL--T-----------PFLRLAREQGQARLAD-G-----VGMLVEQAAEAFAWWRGV 256 (272)
T ss_dssp EEESSCSCCS--C-----------HHHHHHHHHSCCEEEC-T-----HHHHHHHHHHHHHHHHSC
T ss_pred EEEeecCCCC--C-----------HHHHHHHHCCCCEEEC-C-----HHHHHHHHHHHHHHHhCC
Confidence 9999877532 1 1322122223211233 3 569998888887766543
No 59
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=90.40 E-value=0.21 Score=51.43 Aligned_cols=41 Identities=20% Similarity=0.370 Sum_probs=36.2
Q ss_pred CCHHHHhhhCCEEEEeccCC---CceecCcccCCeEEEeccccc
Q psy7978 22 KNIQDVVKSADILVVGIGQP---EYVKGDWIKPGAVVIDCGINS 62 (542)
Q Consensus 22 ~nl~~~~k~ADIVIsAvG~p---~lI~~d~ik~GavVIDVGin~ 62 (542)
.++++.+++|||||+|+..+ .++..+|+++|..|+++|...
T Consensus 186 ~~~~eav~~aDiVi~aTps~~~~pvl~~~~l~~G~~V~~vgs~~ 229 (350)
T 1x7d_A 186 SSVAEAVKGVDIITTVTADKAYATIITPDMLEPGMHLNAVGGDC 229 (350)
T ss_dssp SSHHHHHTTCSEEEECCCCSSEEEEECGGGCCTTCEEEECSCCB
T ss_pred CCHHHHHhcCCEEEEeccCCCCCceecHHHcCCCCEEEECCCCC
Confidence 46888899999999999986 368899999999999999864
No 60
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=90.39 E-value=0.23 Score=52.02 Aligned_cols=117 Identities=19% Similarity=0.152 Sum_probs=74.0
Q ss_pred CchHHHHHHHhCCCe-eecC----------CCCCHHHHhhhCCEEEEecc--------CCCceecCc---ccCCeEEEec
Q psy7978 1 MWSSLQTFWLWVLAN-PSMS----------KTKNIQDVVKSADILVVGIG--------QPEYVKGDW---IKPGAVVIDC 58 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs----------~T~nl~~~~k~ADIVIsAvG--------~p~lI~~d~---ik~GavVIDV 58 (542)
||+++|..|...|++ +.+. ...++.+.+++||||+.++. ..++|+.+. +|+|+++||+
T Consensus 130 IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~ 209 (381)
T 3oet_A 130 VGSRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINA 209 (381)
T ss_dssp HHHHHHHHHHHTTCEEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEEC
Confidence 589999999999988 3322 12379999999999999997 566887765 4899999999
Q ss_pred cccccCCCcc-----CCCCeeee---ccccc------cccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHh
Q psy7978 59 GINSVPDASK-----ASGQKLVG---DVQYA------EAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYID 118 (542)
Q Consensus 59 Gin~~~d~~~-----~~~~kl~G---DVdf~------~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~ 118 (542)
|--.+-|+.. ++| ++.| ||-.. ...+....+||=-||.-.-+..-..+.+++...+.+.
T Consensus 210 aRG~vvde~aL~~aL~~g-~i~gA~LDV~e~EP~~~~~L~~~~~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~ 282 (381)
T 3oet_A 210 CRGPVVDNAALLARLNAG-QPLSVVLDVWEGEPDLNVALLEAVDIGTSHIAGYTLEGKARGTTQVFEAYSAFIG 282 (381)
T ss_dssp SCGGGBCHHHHHHHHHTT-CCEEEEESCCTTTTSCCHHHHHHSSEECSSCTTCCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcccCHHHHHHHHHhC-CCeEEEeeccccCCCCcchhhhCCEEECCccCcCcHHHHHHHHHHHHHHHHHHHc
Confidence 9654322210 111 3443 76211 1122234689987776655544444444444444443
No 61
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=90.38 E-value=0.23 Score=52.60 Aligned_cols=116 Identities=18% Similarity=0.233 Sum_probs=74.1
Q ss_pred CchHHHHHHHhCCCe-eecCC-----------CCCHHHHhhhCCEEEEeccCC----CceecCc---ccCCeEEEecccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK-----------TKNIQDVVKSADILVVGIGQP----EYVKGDW---IKPGAVVIDCGIN 61 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~-----------T~nl~~~~k~ADIVIsAvG~p----~lI~~d~---ik~GavVIDVGin 61 (542)
||+++|.+|...|++ +.+.. ..++.+.+++||+|+.++... ++|..+. .|+|+++||++--
T Consensus 167 IG~~vA~~l~~~G~~V~~yd~~~~~~~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG 246 (416)
T 3k5p_A 167 IGSQVGNLAESLGMTVRYYDTSDKLQYGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARG 246 (416)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTCCCCBTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCT
T ss_pred HHHHHHHHHHHCCCEEEEECCcchhcccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCC
Confidence 589999999999998 44332 137999999999999999863 6887655 5899999999965
Q ss_pred ccCCCcc-----CCCCeeee---cccccc--c-----------cccceEeecCCCCcchhhHHHHHHhHHHHHHHHHh
Q psy7978 62 SVPDASK-----ASGQKLVG---DVQYAE--A-----------KNVASWITPVPGGVGPMTVAMLMNNTVLSAERYID 118 (542)
Q Consensus 62 ~~~d~~~-----~~~~kl~G---DVdf~~--v-----------~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~ 118 (542)
.+-|... ++| ++.| || |+. . .-.-..+||=-||.-.-+..-+.+.+++...+.+.
T Consensus 247 ~vvd~~aL~~aL~~g-~i~gAalDV-f~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~nl~~~l~ 322 (416)
T 3k5p_A 247 SDVDLEALAKVLQEG-HLAGAAIDV-FPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYSD 322 (416)
T ss_dssp TSBCHHHHHHHHHTT-SEEEEEECC-CSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHcC-CccEEEeCC-CCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4422210 112 4433 55 221 0 11124689987777666555555445444444443
No 62
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.04 E-value=0.17 Score=50.68 Aligned_cols=61 Identities=13% Similarity=-0.060 Sum_probs=45.7
Q ss_pred CchHHHHHHHhCC-Ce-eecCCCC---------------------CHHHHhhhCCEEEEeccCCCcee-----cCcccCC
Q psy7978 1 MWSSLQTFWLWVL-AN-PSMSKTK---------------------NIQDVVKSADILVVGIGQPEYVK-----GDWIKPG 52 (542)
Q Consensus 1 vgkPLa~LL~~~~-AT-icHs~T~---------------------nl~~~~k~ADIVIsAvG~p~lI~-----~d~ik~G 52 (542)
||.+++..|.+.| .+ ++..+++ ++.+.+++||+||+++..+...+ .+.+++|
T Consensus 35 mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~~~~s~~e~~~~aDvVi~avp~~~~~~~~~~i~~~l~~~ 114 (317)
T 4ezb_A 35 AAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGVEPLDDVAGIACADVVLSLVVGAATKAVAASAAPHLSDE 114 (317)
T ss_dssp HHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTCEEESSGGGGGGCSEEEECCCGGGHHHHHHHHGGGCCTT
T ss_pred HHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCCCCCCHHHHHhcCCEEEEecCCHHHHHHHHHHHhhcCCC
Confidence 5889999999998 66 4433332 56778899999999999886543 2457888
Q ss_pred eEEEecccc
Q psy7978 53 AVVIDCGIN 61 (542)
Q Consensus 53 avVIDVGin 61 (542)
.+|||+++.
T Consensus 115 ~ivv~~st~ 123 (317)
T 4ezb_A 115 AVFIDLNSV 123 (317)
T ss_dssp CEEEECCSC
T ss_pred CEEEECCCC
Confidence 999988743
No 63
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=89.92 E-value=0.3 Score=49.62 Aligned_cols=118 Identities=16% Similarity=0.164 Sum_probs=72.3
Q ss_pred CchHHHHHHHhCCCe-eecCCCC-------------CHHHHhhhCCEEEEeccCC----Cceec---CcccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK-------------NIQDVVKSADILVVGIGQP----EYVKG---DWIKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~-------------nl~~~~k~ADIVIsAvG~p----~lI~~---d~ik~GavVIDVG 59 (542)
||++++..|...|.. +++.++. ++.+.+++||+||.++... +++.. ..+|+|+++||++
T Consensus 161 iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~s 240 (334)
T 2dbq_A 161 IGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIA 240 (334)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred HHHHHHHHHHhCCCEEEEECCCcchhhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 589999999998888 4443332 5778899999999999875 46653 4578999999998
Q ss_pred ccccCCCcc-----CCCCeeee---cccccc------c-cccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 60 INSVPDASK-----ASGQKLVG---DVQYAE------A-KNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 60 in~~~d~~~-----~~~~kl~G---DVdf~~------v-~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
.-.+-+... +++ ++.| ||--.+ + ...-..+||-.||.-.-+..-+.+.+++..++.+..
T Consensus 241 rg~~v~~~aL~~aL~~~-~i~ga~lDv~~~EP~~~~~L~~~~~vi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g 314 (334)
T 2dbq_A 241 RGKVVDTNALVKALKEG-WIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRG 314 (334)
T ss_dssp CGGGBCHHHHHHHHHHT-SSSEEEESCCSSSSCCCHHHHHCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcccCHHHHHHHHHhC-CeeEEEecCCCCCCCCCchhhcCCCEEECCccCCCcHHHHHHHHHHHHHHHHHHHcC
Confidence 654322100 011 3333 552111 1 112346788877766655555444455444444443
No 64
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=89.85 E-value=0.31 Score=49.88 Aligned_cols=118 Identities=17% Similarity=0.214 Sum_probs=73.4
Q ss_pred CchHHHHHHH-hCCCe-eecCCC---------------CCHHHHhhhCCEEEEeccCC----Cceec---CcccCCeEEE
Q psy7978 1 MWSSLQTFWL-WVLAN-PSMSKT---------------KNIQDVVKSADILVVGIGQP----EYVKG---DWIKPGAVVI 56 (542)
Q Consensus 1 vgkPLa~LL~-~~~AT-icHs~T---------------~nl~~~~k~ADIVIsAvG~p----~lI~~---d~ik~GavVI 56 (542)
||+.++..|. ..|.+ +.+..+ .++.+.+++||+||.++.-. +++.. ..+|+|+++|
T Consensus 174 IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gaili 253 (348)
T 2w2k_A 174 IQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIV 253 (348)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEE
T ss_pred HHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEE
Confidence 5899999998 88887 443322 26778899999999999753 56754 4569999999
Q ss_pred eccccccCCCcc-----CCCCeeee---cccccc------c-cccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 57 DCGINSVPDASK-----ASGQKLVG---DVQYAE------A-KNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 57 DVGin~~~d~~~-----~~~~kl~G---DVdf~~------v-~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
|++....-+... +++ ++.| ||--.+ . ...-..+||-.||.-.-+..-+.+.+++...+.+..
T Consensus 254 n~srg~~vd~~aL~~aL~~~-~i~gaglDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~ni~~~~~g 330 (348)
T 2w2k_A 254 NTARGPVISQDALIAALKSG-KLLSAGLDVHEFEPQVSKELIEMKHVTLTTHIGGVAIETFHEFERLTMTNIDRFLLQ 330 (348)
T ss_dssp ECSCGGGBCHHHHHHHHHTT-SEEEEEESSCTTTTSCCHHHHTSSSEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHT
T ss_pred ECCCCchhCHHHHHHHHHhC-CceEEEeccCCCCCCCCchhhcCCCEEEcCcCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 999774322110 011 4543 552111 1 112346899888776666555554445444444443
No 65
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=89.84 E-value=0.32 Score=48.82 Aligned_cols=62 Identities=21% Similarity=0.302 Sum_probs=47.2
Q ss_pred CchHHHHHHHhCCCe-eecCCC---------------CCHHHHhhhCCEEEEeccCCCcee---------cCcccCCeEE
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT---------------KNIQDVVKSADILVVGIGQPEYVK---------GDWIKPGAVV 55 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T---------------~nl~~~~k~ADIVIsAvG~p~lI~---------~d~ik~GavV 55 (542)
||.||+.-|++.|-+ .++-+| .++++.++.+|+||+.+..+.-+. .+.+++|.+|
T Consensus 14 MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~ii 93 (300)
T 3obb_A 14 MGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLV 93 (300)
T ss_dssp THHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEE
T ss_pred HHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEE
Confidence 799999999999887 444333 368889999999999998776322 1346889999
Q ss_pred Eeccccc
Q psy7978 56 IDCGINS 62 (542)
Q Consensus 56 IDVGin~ 62 (542)
||.++..
T Consensus 94 Id~sT~~ 100 (300)
T 3obb_A 94 LECSTIA 100 (300)
T ss_dssp EECSCCC
T ss_pred EECCCCC
Confidence 9999874
No 66
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=89.68 E-value=0.27 Score=48.51 Aligned_cols=61 Identities=20% Similarity=0.194 Sum_probs=46.4
Q ss_pred CchHHHHHHHhCCCe-eecCCC---------------CCHHHHhhhCCEEEEeccCCCcee------cCcccCCeEEEec
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT---------------KNIQDVVKSADILVVGIGQPEYVK------GDWIKPGAVVIDC 58 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T---------------~nl~~~~k~ADIVIsAvG~p~lI~------~d~ik~GavVIDV 58 (542)
||.+++..|.+.|.+ ++..++ .++++.++ ||+||.++..+.-++ .+.+++|.+|||.
T Consensus 26 mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~~l~~g~ivv~~ 104 (296)
T 3qha_A 26 MGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAGHAKPGTVIAIH 104 (296)
T ss_dssp THHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHTTCCTTCEEEEC
T ss_pred HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHHhcCCCCEEEEe
Confidence 689999999998877 333332 36778888 999999999764333 3568899999999
Q ss_pred cccc
Q psy7978 59 GINS 62 (542)
Q Consensus 59 Gin~ 62 (542)
+...
T Consensus 105 st~~ 108 (296)
T 3qha_A 105 STIS 108 (296)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 8754
No 67
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=89.61 E-value=0.36 Score=50.96 Aligned_cols=80 Identities=14% Similarity=0.206 Sum_probs=53.6
Q ss_pred HHhhhCCEEEEeccC----CCceecCcc----cCCeEEEeccccccCCCccCCCCeeeeccccc---------cc--cc-
Q psy7978 26 DVVKSADILVVGIGQ----PEYVKGDWI----KPGAVVIDCGINSVPDASKASGQKLVGDVQYA---------EA--KN- 85 (542)
Q Consensus 26 ~~~k~ADIVIsAvG~----p~lI~~d~i----k~GavVIDVGin~~~d~~~~~~~kl~GDVdf~---------~v--~~- 85 (542)
+.++.|||||.++=. |.||+.+|+ |+|++||||.+-.- + -++.+||. -+ ..
T Consensus 259 ~~i~~aDivIn~vlig~~aP~Lvt~e~v~~m~k~gsVIVDVA~D~G--G-------~~et~~f~~~~Tt~~~P~~~~~g~ 329 (394)
T 2qrj_A 259 DEIPQADIFINCIYLSKPIAPFTNMEKLNNPNRRLRTVVDVSADTT--N-------PHNPIPIYTVATVFNKPTVLVPTT 329 (394)
T ss_dssp THHHHSSEEEECCCCCSSCCCSCCHHHHCCTTCCCCEEEETTCCTT--C-------TTCSSCSCCCCCBTTBCCEEECCS
T ss_pred hhHhhCCEEEECcCcCCCCCcccCHHHHhcCcCCCeEEEEEecCCC--C-------CcCcccccccCCccCCCEEEECCC
Confidence 567899999999985 999999998 88999999965431 0 01111110 00 00
Q ss_pred ----c-ceEeecCCCCcchhhHHHHHHhHHHHHHH
Q psy7978 86 ----V-ASWITPVPGGVGPMTVAMLMNNTVLSAER 115 (542)
Q Consensus 86 ----~-a~~iTPVPGGVGpmTvamL~~N~v~aa~~ 115 (542)
+ ...++=.||-+ |.|.+.++-|.+.-+-.
T Consensus 330 ~~~~V~~~~v~nlP~~l-PrtAS~~~sn~llp~l~ 363 (394)
T 2qrj_A 330 AGPKLSVISIDHLPSLL-PREASEFFSHDLLPSLE 363 (394)
T ss_dssp SSSCEEEECCTTGGGGS-HHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCChhhhh-HHHHHHHHHHHHHHHHH
Confidence 1 12345568999 99999999887765433
No 68
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=89.53 E-value=0.2 Score=48.84 Aligned_cols=61 Identities=15% Similarity=0.133 Sum_probs=45.5
Q ss_pred CchHHHHHHHhCCCe-eecCCC---------------CCHHHHhhhCCEEEEeccCCCceec---------CcccCCeEE
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT---------------KNIQDVVKSADILVVGIGQPEYVKG---------DWIKPGAVV 55 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T---------------~nl~~~~k~ADIVIsAvG~p~lI~~---------d~ik~GavV 55 (542)
||.+++..|.+.|.+ ++..++ .++.+.+++||+||.++.-+.-+.. +.+++|.+|
T Consensus 12 mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~v 91 (287)
T 3pef_A 12 MGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGY 91 (287)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEE
T ss_pred HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEE
Confidence 589999999999887 333332 3677888999999999986532221 346899999
Q ss_pred Eecccc
Q psy7978 56 IDCGIN 61 (542)
Q Consensus 56 IDVGin 61 (542)
||.+..
T Consensus 92 i~~st~ 97 (287)
T 3pef_A 92 VDMSTV 97 (287)
T ss_dssp EECSCC
T ss_pred EeCCCC
Confidence 998754
No 69
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=89.45 E-value=0.25 Score=51.36 Aligned_cols=119 Identities=15% Similarity=0.124 Sum_probs=73.9
Q ss_pred CchHHHHHHHhCCCe-eecCCC-------------CCHHHHhhhCCEEEEeccCC----CceecCc---ccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT-------------KNIQDVVKSADILVVGIGQP----EYVKGDW---IKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T-------------~nl~~~~k~ADIVIsAvG~p----~lI~~d~---ik~GavVIDVG 59 (542)
||+++|..|...|+. +.+..+ .++.+.+++||||+.++... ++|+.+. .|+|+++||+|
T Consensus 187 IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~a 266 (365)
T 4hy3_A 187 LGKALRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLS 266 (365)
T ss_dssp HHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECS
T ss_pred ccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECc
Confidence 589999999888988 555432 25888999999999998754 5777655 58999999999
Q ss_pred ccccCCCcc-----CCCCee--eecccccc--------ccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhhh
Q psy7978 60 INSVPDASK-----ASGQKL--VGDVQYAE--------AKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRL 120 (542)
Q Consensus 60 in~~~d~~~-----~~~~kl--~GDVdf~~--------v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~~ 120 (542)
--.+-|+.. ++| ++ .=||-..+ ..-.-..+||=-||.-.-+...+.+.+++..++.+..+
T Consensus 267 RG~~vde~aL~~aL~~g-~i~aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~G~ 341 (365)
T 4hy3_A 267 RADVVDFDALMAAVSSG-HIVAASDVYPEEPLPLDHPVRSLKGFIRSAHRAGALDSAFKKMGDMVLEDMDLMDRGL 341 (365)
T ss_dssp CGGGSCHHHHHHHHHTT-SSEEEESCCSSSSCCTTCGGGTCTTEEECCSCSSCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCchhCHHHHHHHHHcC-CceEEeeCCCCCCCCCCChhhcCCCEEECCccccCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 543222100 001 11 11441111 01112568998888777666666555555555555543
No 70
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=89.19 E-value=0.37 Score=50.61 Aligned_cols=63 Identities=13% Similarity=0.237 Sum_probs=49.6
Q ss_pred CchHHHHHHHhCCCe-eecCC-----------CCCHHHHhhhCCEEEEeccCC----CceecC---cccCCeEEEecccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK-----------TKNIQDVVKSADILVVGIGQP----EYVKGD---WIKPGAVVIDCGIN 61 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~-----------T~nl~~~~k~ADIVIsAvG~p----~lI~~d---~ik~GavVIDVGin 61 (542)
||+++|..|...|.. +.+.. ..++.+.+++||+|+.++... ++|..+ ..|+|+++||++.-
T Consensus 156 IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg 235 (404)
T 1sc6_A 156 IGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRG 235 (404)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCS
T ss_pred HHHHHHHHHHHCCCEEEEEcCCchhccCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCC
Confidence 589999999999988 33322 137899999999999999875 577654 45999999999976
Q ss_pred cc
Q psy7978 62 SV 63 (542)
Q Consensus 62 ~~ 63 (542)
.+
T Consensus 236 ~~ 237 (404)
T 1sc6_A 236 TV 237 (404)
T ss_dssp SS
T ss_pred hH
Confidence 54
No 71
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=89.11 E-value=0.46 Score=49.89 Aligned_cols=63 Identities=8% Similarity=0.098 Sum_probs=49.0
Q ss_pred CchHHHHHHHhCCCe-eecCCC---------------CCHHHHhhhCCEEEEeccC----CCceec---CcccCCeEEEe
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT---------------KNIQDVVKSADILVVGIGQ----PEYVKG---DWIKPGAVVID 57 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T---------------~nl~~~~k~ADIVIsAvG~----p~lI~~---d~ik~GavVID 57 (542)
||+.++..|...|+. +.+..+ .++.+.+++||||+.++.. .++|+. ..+|+|+++||
T Consensus 202 IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN 281 (393)
T 2nac_A 202 IGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVN 281 (393)
T ss_dssp HHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEE
Confidence 588999999988888 444322 3688899999999999884 367764 45799999999
Q ss_pred cccccc
Q psy7978 58 CGINSV 63 (542)
Q Consensus 58 VGin~~ 63 (542)
+|--.+
T Consensus 282 ~aRG~~ 287 (393)
T 2nac_A 282 TARGKL 287 (393)
T ss_dssp CSCGGG
T ss_pred CCCchH
Confidence 997643
No 72
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=89.08 E-value=0.29 Score=48.91 Aligned_cols=62 Identities=18% Similarity=0.184 Sum_probs=46.5
Q ss_pred CchHHHHHHHhCCCe-eecCCC---------------CCHHHHhhhCCEEEEeccCCCceec--------CcccCCeEEE
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT---------------KNIQDVVKSADILVVGIGQPEYVKG--------DWIKPGAVVI 56 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T---------------~nl~~~~k~ADIVIsAvG~p~lI~~--------d~ik~GavVI 56 (542)
||.+++..|.+.|.. ++..++ .++.+.+++||+||.++..+.-++. +.+++|.+||
T Consensus 42 mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi 121 (320)
T 4dll_A 42 MGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFL 121 (320)
T ss_dssp THHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEE
T ss_pred HHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEE
Confidence 689999999999887 333332 4678889999999999987643221 2468999999
Q ss_pred eccccc
Q psy7978 57 DCGINS 62 (542)
Q Consensus 57 DVGin~ 62 (542)
|+++..
T Consensus 122 ~~st~~ 127 (320)
T 4dll_A 122 DMASIT 127 (320)
T ss_dssp ECSCCC
T ss_pred ecCCCC
Confidence 988653
No 73
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=88.95 E-value=0.35 Score=49.39 Aligned_cols=63 Identities=16% Similarity=0.190 Sum_probs=48.3
Q ss_pred CchHHHHHHHhCCCe-eecCCC----------CCHHHHhhhCCEEEEeccC----CCceecC---cccCCeEEEeccccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT----------KNIQDVVKSADILVVGIGQ----PEYVKGD---WIKPGAVVIDCGINS 62 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T----------~nl~~~~k~ADIVIsAvG~----p~lI~~d---~ik~GavVIDVGin~ 62 (542)
||+.++..|...|.. +.+.++ .++.+.+++||+||.++.- .+++..+ .+|+|+++||++.-.
T Consensus 175 iG~~vA~~l~~~G~~V~~~dr~~~~~~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~ 254 (333)
T 3ba1_A 175 IGLAVAERAEAFDCPISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGP 254 (333)
T ss_dssp HHHHHHHHHHTTTCCEEEECSSCCTTCCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGG
T ss_pred HHHHHHHHHHHCCCEEEEECCCchhccCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCc
Confidence 589999999988887 333322 3688999999999999975 3567543 458999999998765
Q ss_pred c
Q psy7978 63 V 63 (542)
Q Consensus 63 ~ 63 (542)
.
T Consensus 255 ~ 255 (333)
T 3ba1_A 255 H 255 (333)
T ss_dssp G
T ss_pred h
Confidence 4
No 74
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.81 E-value=0.23 Score=49.30 Aligned_cols=61 Identities=15% Similarity=0.069 Sum_probs=45.7
Q ss_pred CchHHHHHHHhCCCe-eecCC---------------CCCHHHHhhhCCEEEEeccCCCcee---------cCcccCCeEE
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK---------------TKNIQDVVKSADILVVGIGQPEYVK---------GDWIKPGAVV 55 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~---------------T~nl~~~~k~ADIVIsAvG~p~lI~---------~d~ik~GavV 55 (542)
||.+++..|.+.|.. ++..+ +.++.+.+++||+||.++..|.-++ .+.+++|.+|
T Consensus 32 mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~v 111 (310)
T 3doj_A 32 MGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGY 111 (310)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEE
T ss_pred HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEE
Confidence 589999999998877 33322 2467888999999999998874221 1357889999
Q ss_pred Eecccc
Q psy7978 56 IDCGIN 61 (542)
Q Consensus 56 IDVGin 61 (542)
||+++.
T Consensus 112 v~~st~ 117 (310)
T 3doj_A 112 IDMSTV 117 (310)
T ss_dssp EECSCC
T ss_pred EECCCC
Confidence 998754
No 75
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.57 E-value=0.37 Score=52.17 Aligned_cols=61 Identities=21% Similarity=0.163 Sum_probs=49.4
Q ss_pred CchHHHHHHHhCCCe-eecCCC--------------CCHHHHhhhCCEEEEeccCCCceec---CcccCCeEEEecccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT--------------KNIQDVVKSADILVVGIGQPEYVKG---DWIKPGAVVIDCGIN 61 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T--------------~nl~~~~k~ADIVIsAvG~p~lI~~---d~ik~GavVIDVGin 61 (542)
||+.++..|...||+ ++.... .++.+..+.+|+||.+.|.++++.. +.+|+|++|+++|..
T Consensus 276 IG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 276 VGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence 589999999999999 332222 2466778899999999999999976 456899999999975
No 76
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=88.50 E-value=0.45 Score=46.56 Aligned_cols=61 Identities=20% Similarity=0.262 Sum_probs=45.7
Q ss_pred CchHHHHHHHhCCCe-eecCC---------------CCCHHHHhhhCCEEEEeccCCCc----ee-----cCcccCCeEE
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK---------------TKNIQDVVKSADILVVGIGQPEY----VK-----GDWIKPGAVV 55 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~---------------T~nl~~~~k~ADIVIsAvG~p~l----I~-----~d~ik~GavV 55 (542)
||.+++..|.+.|.. ++..+ +.++.+.+++||+||.|+..+.- +. .+.+++|.+|
T Consensus 14 mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~v 93 (302)
T 2h78_A 14 MGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLV 93 (302)
T ss_dssp THHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEE
T ss_pred HHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEE
Confidence 689999999998877 33332 24678889999999999987742 22 2357889999
Q ss_pred Eecccc
Q psy7978 56 IDCGIN 61 (542)
Q Consensus 56 IDVGin 61 (542)
||+++.
T Consensus 94 i~~st~ 99 (302)
T 2h78_A 94 LECSTI 99 (302)
T ss_dssp EECSCC
T ss_pred EECCCC
Confidence 998654
No 77
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=88.43 E-value=0.43 Score=49.89 Aligned_cols=119 Identities=12% Similarity=0.060 Sum_probs=74.6
Q ss_pred CchHHHHHHHhCCCe-eecC----------CCCCHHHHhhhCCEEEEecc--------CCCceecC---cccCCeEEEec
Q psy7978 1 MWSSLQTFWLWVLAN-PSMS----------KTKNIQDVVKSADILVVGIG--------QPEYVKGD---WIKPGAVVIDC 58 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs----------~T~nl~~~~k~ADIVIsAvG--------~p~lI~~d---~ik~GavVIDV 58 (542)
||++++..|...|++ +.+. ...++.+.+++||||+.++. ..++|+.+ .+|+|+++||+
T Consensus 127 IG~~vA~~l~~~G~~V~~~d~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~ 206 (380)
T 2o4c_A 127 VGGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNA 206 (380)
T ss_dssp HHHHHHHHHHHTTCEEEEECHHHHHHSTTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEcCChhhhccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEEC
Confidence 589999999999988 3221 12378999999999999986 45677654 45899999999
Q ss_pred cccccCCCcc-----CCCC--eeeeccccc------cccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 59 GINSVPDASK-----ASGQ--KLVGDVQYA------EAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 59 Gin~~~d~~~-----~~~~--kl~GDVdf~------~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
|...+-|... ++|. ...=||-.. ...+....+||=-+|.-.-+..-..+.+++...+.+..
T Consensus 207 sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~~nvi~TPHiag~t~e~~~~~~~~~~~nl~~~l~g 280 (380)
T 2o4c_A 207 SRGAVVDNQALRRLLEGGADLEVALDVWEGEPQADPELAARCLIATPHIAGYSLEGKLRGTAQIYQAYCAWRGI 280 (380)
T ss_dssp SCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHTTCSEECSSCTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCcccCHHHHHHHHHhCCCceEEeeeeccCCCCchhhccCCEEEccccCcCCHHHHHHHHHHHHHHHHHHHcC
Confidence 9765433210 0111 123355211 11222357899888877666555555555554454443
No 78
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.31 E-value=0.41 Score=47.74 Aligned_cols=61 Identities=13% Similarity=0.134 Sum_probs=45.9
Q ss_pred CchHHHHHHHhCCC-e-eecCCC-----------------CCHHHHhhhCCEEEEeccCCCcee-----cCcccCCeEEE
Q psy7978 1 MWSSLQTFWLWVLA-N-PSMSKT-----------------KNIQDVVKSADILVVGIGQPEYVK-----GDWIKPGAVVI 56 (542)
Q Consensus 1 vgkPLa~LL~~~~A-T-icHs~T-----------------~nl~~~~k~ADIVIsAvG~p~lI~-----~d~ik~GavVI 56 (542)
||.+++..|.+.|. . ++..++ .++.+.+++||+||.++..+..++ .+.+++|.+||
T Consensus 35 mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~~~~l~~~l~~~~ivv 114 (312)
T 3qsg_A 35 AASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALEVAQQAGPHLCEGALYA 114 (312)
T ss_dssp HHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHHHHHHHGGGCCTTCEEE
T ss_pred HHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHHHHHhhHhhcCCCCEEE
Confidence 58899999998888 5 333332 367888999999999999887543 24567888888
Q ss_pred ecccc
Q psy7978 57 DCGIN 61 (542)
Q Consensus 57 DVGin 61 (542)
|+++.
T Consensus 115 d~st~ 119 (312)
T 3qsg_A 115 DFTSC 119 (312)
T ss_dssp ECCCC
T ss_pred EcCCC
Confidence 87654
No 79
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=88.23 E-value=0.22 Score=49.71 Aligned_cols=100 Identities=11% Similarity=0.050 Sum_probs=63.2
Q ss_pred CchHHHHHHHhCCC-e-eecCCCCC----HHH---------------HhhhCCEEEEeccCC-----CceecCcccCCeE
Q psy7978 1 MWSSLQTFWLWVLA-N-PSMSKTKN----IQD---------------VVKSADILVVGIGQP-----EYVKGDWIKPGAV 54 (542)
Q Consensus 1 vgkPLa~LL~~~~A-T-icHs~T~n----l~~---------------~~k~ADIVIsAvG~p-----~lI~~d~ik~Gav 54 (542)
+|++++..|.+.|+ . .+..+|.+ +.+ ..+++||||.|++.. -.++.++++++++
T Consensus 137 ~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~~~~~~l~~~~l~~~~~ 216 (281)
T 3o8q_A 137 AARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDGELPAIDPVIFSSRSV 216 (281)
T ss_dssp HHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC----CSCCGGGEEEEEE
T ss_pred HHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCCCCCCCCCHHHhCcCCE
Confidence 37899999999997 4 34445432 111 125789999999764 2468899999999
Q ss_pred EEeccccccCCCccCCCCeeeeccccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 55 VIDCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 55 VIDVGin~~~d~~~~~~~kl~GDVdf~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
|+|+-.+..+ + ++. ..+++. +.-.-+. | .-||+.+-..+.+.+.+.
T Consensus 217 V~DlvY~P~~--T-----~ll-----~~A~~~-G~~~~~~-G-----l~Mlv~Qa~~~f~lwtg~ 262 (281)
T 3o8q_A 217 CYDMMYGKGY--T-----VFN-----QWARQH-GCAQAID-G-----LGMLVGQAAESFMLWRGL 262 (281)
T ss_dssp EEESCCCSSC--C-----HHH-----HHHHHT-TCSEEEC-T-----HHHHHHHHHHHHHHHHSC
T ss_pred EEEecCCCcc--C-----HHH-----HHHHHC-CCCEEEC-c-----HHHHHHHHHHHHHHHhCC
Confidence 9999877521 1 111 222222 2110122 3 569998888877766543
No 80
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.16 E-value=0.26 Score=48.01 Aligned_cols=62 Identities=15% Similarity=0.135 Sum_probs=46.2
Q ss_pred CchHHHHHHHhCCCe-eecCC---------------CCCHHHHhhhCCEEEEeccCCCc----e---e--cCcccCCeEE
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK---------------TKNIQDVVKSADILVVGIGQPEY----V---K--GDWIKPGAVV 55 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~---------------T~nl~~~~k~ADIVIsAvG~p~l----I---~--~d~ik~GavV 55 (542)
||.+++..|.+.|.. ++..+ +.++.+.+++||+||.++..+.- + + .+.+++|.+|
T Consensus 12 mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~v 91 (287)
T 3pdu_A 12 MGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGGGRGY 91 (287)
T ss_dssp THHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEE
T ss_pred HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEE
Confidence 689999999988876 33322 24678888999999999998732 2 1 2457899999
Q ss_pred Eeccccc
Q psy7978 56 IDCGINS 62 (542)
Q Consensus 56 IDVGin~ 62 (542)
||++...
T Consensus 92 v~~st~~ 98 (287)
T 3pdu_A 92 IDMSTVD 98 (287)
T ss_dssp EECSCCC
T ss_pred EECCCCC
Confidence 9988653
No 81
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.03 E-value=1.3 Score=45.17 Aligned_cols=110 Identities=16% Similarity=0.185 Sum_probs=61.9
Q ss_pred CchHHHHHHHhCCCe--eecCC---------------------CCCHHHHhhhCCEEEEeccCCC-----cee---cCcc
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSK---------------------TKNIQDVVKSADILVVGIGQPE-----YVK---GDWI 49 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~---------------------T~nl~~~~k~ADIVIsAvG~p~-----lI~---~d~i 49 (542)
+|+-.+.+|...||. ++... ..++.+.++.+|+||.++|.|. ++. -+.+
T Consensus 178 vG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~ 257 (361)
T 1pjc_A 178 VGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQM 257 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTS
T ss_pred HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhC
Confidence 366677778778887 22211 1135566778999999999876 233 3567
Q ss_pred cCCeEEEeccccccCCCccCCCCeeeecccccccccc-c--eEeecCCCCcchhhHHHHH-HhHHHHHHH
Q psy7978 50 KPGAVVIDCGINSVPDASKASGQKLVGDVQYAEAKNV-A--SWITPVPGGVGPMTVAMLM-NNTVLSAER 115 (542)
Q Consensus 50 k~GavVIDVGin~~~d~~~~~~~kl~GDVdf~~v~~~-a--~~iTPVPGGVGpmTvamL~-~N~v~aa~~ 115 (542)
++|.+|+|+|.+.-..-. ..+ ..++|...+..+ . ..++-.||.+ |.|.+..+ ++++.....
T Consensus 258 ~~g~~ivdv~~~~gg~~e---~~~-~~~~~~~~~~~~~v~~~~~~~lp~~~-~~~~s~~~~~~~~~~l~~ 322 (361)
T 1pjc_A 258 RTGSVIVDVAVDQGGCVE---TLH-PTSHTQPTYEVFGVVHYGVPNMPGAV-PWTATQALNNSTLPYVVK 322 (361)
T ss_dssp CTTCEEEETTCTTCCSBT---TCC-CCCSSSCEEEETTEEEECCSCGGGGC-HHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecCCCCCCc---ccc-CCCCCCCEEEECCEEEEEeCCcchhh-HHHHHHHHHHHHHHHHHH
Confidence 999999999986411000 000 123333222111 1 1233557777 77766665 444444433
No 82
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=87.78 E-value=0.4 Score=48.51 Aligned_cols=63 Identities=13% Similarity=0.071 Sum_probs=47.2
Q ss_pred CchHHHHHHHhCCCe-eecCCC--------------CCHHHHhhhCCEEEEeccCC----Cceec---CcccCCeEEEec
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT--------------KNIQDVVKSADILVVGIGQP----EYVKG---DWIKPGAVVIDC 58 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T--------------~nl~~~~k~ADIVIsAvG~p----~lI~~---d~ik~GavVIDV 58 (542)
||++++..|...|.+ +++..+ .++.+.+++||+||.++.-. +++.. ..+|+|+++||+
T Consensus 166 iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~ 245 (330)
T 2gcg_A 166 IGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINI 245 (330)
T ss_dssp HHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEEC
Confidence 589999999988887 333221 15778899999999999864 46653 457899999999
Q ss_pred ccccc
Q psy7978 59 GINSV 63 (542)
Q Consensus 59 Gin~~ 63 (542)
+....
T Consensus 246 srg~~ 250 (330)
T 2gcg_A 246 SRGDV 250 (330)
T ss_dssp SCGGG
T ss_pred CCCcc
Confidence 87643
No 83
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.43 E-value=0.59 Score=48.13 Aligned_cols=61 Identities=11% Similarity=0.084 Sum_probs=47.1
Q ss_pred CchHHHHHHHhCCCe-eecCCC---------------CCHHHHhhhC---CEEEEeccCCCcee------cCcccCCeEE
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT---------------KNIQDVVKSA---DILVVGIGQPEYVK------GDWIKPGAVV 55 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T---------------~nl~~~~k~A---DIVIsAvG~p~lI~------~d~ik~GavV 55 (542)
||.+++..|.+.|.+ ++..++ .++++.++.+ |+||.++..+ -+. ...+++|.+|
T Consensus 33 mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl~~l~~~l~~g~ii 111 (358)
T 4e21_A 33 MGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSMLQRMTPLLAANDIV 111 (358)
T ss_dssp HHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHHHHHGGGCCTTCEE
T ss_pred HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHHHHHHhhCCCCCEE
Confidence 589999999999877 333332 4788889999 9999999887 322 2457899999
Q ss_pred Eeccccc
Q psy7978 56 IDCGINS 62 (542)
Q Consensus 56 IDVGin~ 62 (542)
||++...
T Consensus 112 Id~st~~ 118 (358)
T 4e21_A 112 IDGGNSH 118 (358)
T ss_dssp EECSSCC
T ss_pred EeCCCCC
Confidence 9998764
No 84
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=87.27 E-value=0.52 Score=47.96 Aligned_cols=117 Identities=14% Similarity=0.168 Sum_probs=71.6
Q ss_pred CchHHHHHHHhCCCe-eecCCCC-------------CHHHHhhhCCEEEEeccCC----Cceec---CcccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK-------------NIQDVVKSADILVVGIGQP----EYVKG---DWIKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~-------------nl~~~~k~ADIVIsAvG~p----~lI~~---d~ik~GavVIDVG 59 (542)
||+.++..|...|++ +.+.++. ++.+.+++||+||.++... +++.. ..+|+| ++||++
T Consensus 157 iG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~s 235 (333)
T 2d0i_A 157 IGKAIARRLIPFGVKLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIG 235 (333)
T ss_dssp HHHHHHHHHGGGTCEEEEECSSCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECS
T ss_pred HHHHHHHHHHHCCCEEEEECCCcchhhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECC
Confidence 589999999988888 4443322 5778889999999999886 46764 456899 999999
Q ss_pred ccccCCCcc-----CCCCeee---ecccc-c-----cccccc--eEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 60 INSVPDASK-----ASGQKLV---GDVQY-A-----EAKNVA--SWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 60 in~~~d~~~-----~~~~kl~---GDVdf-~-----~v~~~a--~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
-..+-+... +++ ++- =||-- | ...+.. ..+||-.||.-.-+..-+.+.+++..++.+..
T Consensus 236 rg~~vd~~aL~~aL~~~-~i~gaglDv~~~EP~~~~~L~~~~~nviltPh~~~~t~~~~~~~~~~~~~n~~~~~~g 310 (333)
T 2d0i_A 236 RGALVDEKAVTEAIKQG-KLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLALEAQEDVGFRAVENLLKVLRG 310 (333)
T ss_dssp CGGGBCHHHHHHHHHTT-CBCEEEESCCSSSSCSCCGGGGCTTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcccCHHHHHHHHHcC-CceEEEecCCCCCCCCCchHHcCCCCEEEcCccCCCcHHHHHHHHHHHHHHHHHHHcC
Confidence 654432210 011 222 24421 0 122222 56889877766655554544444444444443
No 85
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=87.11 E-value=0.33 Score=48.47 Aligned_cols=62 Identities=13% Similarity=0.121 Sum_probs=46.9
Q ss_pred CchHHHHHHHhCCCe-eecCCC---------------CCHHHHhhhCCEEEEeccCCCceec-------CcccCCeEEEe
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT---------------KNIQDVVKSADILVVGIGQPEYVKG-------DWIKPGAVVID 57 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T---------------~nl~~~~k~ADIVIsAvG~p~lI~~-------d~ik~GavVID 57 (542)
||.|||.-|++.|-. +++-+| .++.+.++++||||+.+..+.-+.. ...++|.++||
T Consensus 16 MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~iiid 95 (297)
T 4gbj_A 16 LGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDGVHVS 95 (297)
T ss_dssp THHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCeEEEE
Confidence 799999999999877 333222 3678889999999999988764332 34689999999
Q ss_pred ccccc
Q psy7978 58 CGINS 62 (542)
Q Consensus 58 VGin~ 62 (542)
.++..
T Consensus 96 ~sT~~ 100 (297)
T 4gbj_A 96 MSTIS 100 (297)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 98864
No 86
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=87.07 E-value=0.41 Score=46.98 Aligned_cols=61 Identities=20% Similarity=0.061 Sum_probs=44.8
Q ss_pred CchHHHHHHHhCCCe--eecCCC----------------CCHHHHhhhCCEEEEeccC---C--CceecCcccCCeEEEe
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSKT----------------KNIQDVVKSADILVVGIGQ---P--EYVKGDWIKPGAVVID 57 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~T----------------~nl~~~~k~ADIVIsAvG~---p--~lI~~d~ik~GavVID 57 (542)
+|++++..|.+.|+. .+..+| .++.+.++++||||.|+.. | ..++.++++++.+|+|
T Consensus 119 ~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~~~i~~~~l~~~~~V~D 198 (253)
T 3u62_A 119 AARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEELPVSDDSLKNLSLVYD 198 (253)
T ss_dssp HHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCCCSCCHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEE
Confidence 368888889999984 222232 2456778899999999853 3 2467788999999999
Q ss_pred cccc
Q psy7978 58 CGIN 61 (542)
Q Consensus 58 VGin 61 (542)
+-.+
T Consensus 199 ivy~ 202 (253)
T 3u62_A 199 VIYF 202 (253)
T ss_dssp CSSS
T ss_pred eeCC
Confidence 8766
No 87
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=86.94 E-value=0.42 Score=47.93 Aligned_cols=97 Identities=14% Similarity=0.194 Sum_probs=62.0
Q ss_pred CchHHHHHHHhCCCe--eecCCCCCHH-HH--------------hhhCCEEEEeccC---CC----ceecCcccCCeEEE
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSKTKNIQ-DV--------------VKSADILVVGIGQ---PE----YVKGDWIKPGAVVI 56 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~T~nl~-~~--------------~k~ADIVIsAvG~---p~----lI~~d~ik~GavVI 56 (542)
+||+++..|.+.|+. .+..+|.+-. ++ + ++||||.|++. |+ .++.++++++.+|+
T Consensus 133 aaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~l-~~DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~ 211 (282)
T 3fbt_A 133 AARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSNL-KGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAV 211 (282)
T ss_dssp THHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTTC-CCSEEEECSSTTSTTSTTCCSSCHHHHTTCSEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHhc-cCCEEEECCccCccCCCccCCCCHHHcCCCCEEE
Confidence 478999999999994 3333553211 11 3 79999999953 33 37889999999999
Q ss_pred eccccccCCCccCCCCeeeeccccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHh
Q psy7978 57 DCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYID 118 (542)
Q Consensus 57 DVGin~~~d~~~~~~~kl~GDVdf~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~ 118 (542)
|+-.|..+. .|-...+..++ +-+.| .-||+.+-..+.+.+.+
T Consensus 212 DlvY~P~~T-------------~ll~~A~~~G~-~~~~G------l~MLv~Qa~~~f~lwtg 253 (282)
T 3fbt_A 212 DLIYNPVET-------------LFLKYARESGV-KAVNG------LYMLVSQAAASEEIWND 253 (282)
T ss_dssp ESCCSSSSC-------------HHHHHHHHTTC-EEECS------HHHHHHHHHHHHHHHHT
T ss_pred EEeeCCCCC-------------HHHHHHHHCcC-eEeCc------HHHHHHHHHHHHHHHcC
Confidence 998876321 12221222232 22333 67998888877766554
No 88
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=86.84 E-value=0.49 Score=48.16 Aligned_cols=98 Identities=11% Similarity=0.173 Sum_probs=62.7
Q ss_pred CchHHHHHHHhCCC-e-eecCCC---C---------------------------CHHHHhhhCCEEEEeccC---CC---
Q psy7978 1 MWSSLQTFWLWVLA-N-PSMSKT---K---------------------------NIQDVVKSADILVVGIGQ---PE--- 42 (542)
Q Consensus 1 vgkPLa~LL~~~~A-T-icHs~T---~---------------------------nl~~~~k~ADIVIsAvG~---p~--- 42 (542)
+|+.++..|.++|| . .+..+| . ++.+.++++||||.|++. |+
T Consensus 165 ~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~ 244 (315)
T 3tnl_A 165 AATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGE 244 (315)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECSSTTSTTSTTC
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEECccCCCCCCCCC
Confidence 36788889999999 4 333444 1 134456789999999863 32
Q ss_pred -ce-ecCcccCCeEEEeccccccCCCccCCCCeeeecccc-ccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 43 -YV-KGDWIKPGAVVIDCGINSVPDASKASGQKLVGDVQY-AEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 43 -lI-~~d~ik~GavVIDVGin~~~d~~~~~~~kl~GDVdf-~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
.+ ..++++++.+|+|+=.+..+ + .| ..+++ .++ .-+.| .-||+.+-..+.+.+.+.
T Consensus 245 ~p~~~~~~l~~~~~V~DlvY~P~~--T-----------~ll~~A~~-~G~-~~~~G------l~MLv~Qa~~af~lwtG~ 303 (315)
T 3tnl_A 245 TLLPSADMLRPELIVSDVVYKPTK--T-----------RLLEIAEE-QGC-QTLNG------LGMMLWQGAKAFEIWTHK 303 (315)
T ss_dssp CSCCCGGGCCTTCEEEESCCSSSS--C-----------HHHHHHHH-TTC-EEECS------HHHHHHHHHHHHHHHHSS
T ss_pred CCCCcHHHcCCCCEEEEeccCCCC--C-----------HHHHHHHH-CCC-eEeCc------HHHHHHHHHHHHHHHhCC
Confidence 35 78899999999998766531 1 12 12222 232 22333 569988888877766543
No 89
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.72 E-value=1.8 Score=44.56 Aligned_cols=105 Identities=16% Similarity=0.170 Sum_probs=61.3
Q ss_pred CchHHHHHHHhCCCe-eecCC----------------------CCCHHHHhhhCCEEEEeccCCC-----ceec---Ccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK----------------------TKNIQDVVKSADILVVGIGQPE-----YVKG---DWI 49 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~----------------------T~nl~~~~k~ADIVIsAvG~p~-----lI~~---d~i 49 (542)
||+.++.++...||. ++... ..++.+.++.+|+||.++|.|. +|.. +.+
T Consensus 179 iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~t~~li~~~~l~~m 258 (377)
T 2vhw_A 179 AGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKAPKLVSNSLVAHM 258 (377)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHTTS
T ss_pred HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCCCcceecHHHHhcC
Confidence 467777788778877 22211 1245677889999999998875 4443 346
Q ss_pred cCCeEEEeccccccCCCccCCCCeeeecccccc--ccccceEeecCCCCcchhhHHHHHHhH
Q psy7978 50 KPGAVVIDCGINSVPDASKASGQKLVGDVQYAE--AKNVASWITPVPGGVGPMTVAMLMNNT 109 (542)
Q Consensus 50 k~GavVIDVGin~~~d~~~~~~~kl~GDVdf~~--v~~~a~~iTPVPGGVGpmTvamL~~N~ 109 (542)
|+|+++||+|+.+- +.=.. .. -..+|.+- ..++.-+.||--+|-=|.|..+.+.|.
T Consensus 259 k~g~~iV~va~~~G--gv~e~-~e-p~~~~~~~~~~~~v~i~~~phl~~~~~~~as~~~~~~ 316 (377)
T 2vhw_A 259 KPGAVLVDIAIDQG--GCFEG-SR-PTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNA 316 (377)
T ss_dssp CTTCEEEEGGGGTT--CSBTT-CC-CBCSSSCEEEETTEEEECBTTGGGGSHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCC--Ccccc-cc-CCCCCCCEEEECCEEEEecCCcchhhHHHHHHHHHHH
Confidence 89999999996531 00000 00 00122121 233344467775665588877665443
No 90
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=86.51 E-value=0.61 Score=46.65 Aligned_cols=41 Identities=29% Similarity=0.594 Sum_probs=34.3
Q ss_pred CCHHHHhhhCCEEEEeccCCC-ceecCcccCCeEEEeccccc
Q psy7978 22 KNIQDVVKSADILVVGIGQPE-YVKGDWIKPGAVVIDCGINS 62 (542)
Q Consensus 22 ~nl~~~~k~ADIVIsAvG~p~-lI~~d~ik~GavVIDVGin~ 62 (542)
.++++.+++|||||.++.... +++.+|+++|.+|+|+|.+.
T Consensus 188 ~~~~e~v~~aDiVi~atp~~~~v~~~~~l~~g~~vi~~g~~~ 229 (312)
T 2i99_A 188 SSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASR 229 (312)
T ss_dssp SSHHHHHTTCSEEEECCCCSSCCBCGGGSCTTCEEEECCCCS
T ss_pred CCHHHHHhcCCEEEEEeCCCCcccCHHHcCCCcEEEeCCCCC
Confidence 467888999999999997544 46678999999999998764
No 91
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=85.94 E-value=0.6 Score=47.15 Aligned_cols=40 Identities=20% Similarity=0.461 Sum_probs=33.8
Q ss_pred CCHHHHhhhCCEEEEeccCCC-ceecCcccCCeEEEeccccc
Q psy7978 22 KNIQDVVKSADILVVGIGQPE-YVKGDWIKPGAVVIDCGINS 62 (542)
Q Consensus 22 ~nl~~~~k~ADIVIsAvG~p~-lI~~d~ik~GavVIDVGin~ 62 (542)
.++++.+ +|||||+|+.... +++.+|+++|..|+|+|...
T Consensus 180 ~~~~e~v-~aDvVi~aTp~~~pv~~~~~l~~G~~V~~ig~~~ 220 (322)
T 1omo_A 180 QPAEEAS-RCDVLVTTTPSRKPVVKAEWVEEGTHINAIGADG 220 (322)
T ss_dssp CCHHHHT-SSSEEEECCCCSSCCBCGGGCCTTCEEEECSCCS
T ss_pred CCHHHHh-CCCEEEEeeCCCCceecHHHcCCCeEEEECCCCC
Confidence 3567778 9999999998765 46789999999999999764
No 92
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=85.42 E-value=0.46 Score=47.14 Aligned_cols=62 Identities=6% Similarity=0.039 Sum_probs=46.1
Q ss_pred CchHHHHHHHhCCCe-eecCC---------------CCCHHHHhhhCCEEEEeccCCC----ceec---CcccCCeEEEe
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK---------------TKNIQDVVKSADILVVGIGQPE----YVKG---DWIKPGAVVID 57 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~---------------T~nl~~~~k~ADIVIsAvG~p~----lI~~---d~ik~GavVID 57 (542)
||.+++..|.+.|.. ++..+ +.++.+.+++||+||.++..+. ++.. ..+++|.+|||
T Consensus 20 mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~l~~~~~g~ivid 99 (306)
T 3l6d_A 20 MGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGMPGVARALAHRTIVD 99 (306)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTSTTHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcccchhhccCCCEEEE
Confidence 589999999998877 33333 2478888999999999999764 2221 12478999999
Q ss_pred ccccc
Q psy7978 58 CGINS 62 (542)
Q Consensus 58 VGin~ 62 (542)
+++..
T Consensus 100 ~st~~ 104 (306)
T 3l6d_A 100 YTTNA 104 (306)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 98764
No 93
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=85.34 E-value=0.28 Score=48.38 Aligned_cols=61 Identities=16% Similarity=0.134 Sum_probs=44.7
Q ss_pred CchHHHHHHHhCCCe-eecCC----------------CCCHHHHhhhCCEEEEeccCCCcee---------cCcccCCeE
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK----------------TKNIQDVVKSADILVVGIGQPEYVK---------GDWIKPGAV 54 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~----------------T~nl~~~~k~ADIVIsAvG~p~lI~---------~d~ik~Gav 54 (542)
||.+++..|.+.|.+ ++..+ +.++.+.+++||+||.++..+.-++ .+.+++|.+
T Consensus 18 mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~i 97 (303)
T 3g0o_A 18 MGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSA 97 (303)
T ss_dssp HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCE
T ss_pred HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCE
Confidence 588999999998877 32222 3456677889999999999864221 245789999
Q ss_pred EEecccc
Q psy7978 55 VIDCGIN 61 (542)
Q Consensus 55 VIDVGin 61 (542)
|||++..
T Consensus 98 vv~~st~ 104 (303)
T 3g0o_A 98 VMVSSTI 104 (303)
T ss_dssp EEECSCC
T ss_pred EEecCCC
Confidence 9998764
No 94
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=85.32 E-value=0.67 Score=45.76 Aligned_cols=61 Identities=7% Similarity=0.111 Sum_probs=45.3
Q ss_pred CchHHHHHHHhCCCe-eecCCC--CCHHHHhhhCCEEEEeccCCCc---ee--cCcccCCeEEEecccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT--KNIQDVVKSADILVVGIGQPEY---VK--GDWIKPGAVVIDCGIN 61 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T--~nl~~~~k~ADIVIsAvG~p~l---I~--~d~ik~GavVIDVGin 61 (542)
||..++..|.+.|.. ++..++ .++.+.+++||+||.|+....+ +. ...++++++|+|++..
T Consensus 33 mG~~la~~l~~~G~~V~~~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~~~~sv 101 (298)
T 2pv7_A 33 LGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLADLTSV 101 (298)
T ss_dssp HHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCSC
T ss_pred HHHHHHHHHHhCCCeEEEEECCcccCHHHHhcCCCEEEEeCCHHHHHHHHHHHHhhcCCCcEEEECCCC
Confidence 578999999988877 333333 3678889999999999976653 21 2457889999998754
No 95
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=85.20 E-value=0.88 Score=45.35 Aligned_cols=97 Identities=12% Similarity=0.060 Sum_probs=63.3
Q ss_pred chHHHHHHHhCCCe--eecCCCC-------------------------CHHHHhhhCCEEEEeccC---C--C-ceecCc
Q psy7978 2 WSSLQTFWLWVLAN--PSMSKTK-------------------------NIQDVVKSADILVVGIGQ---P--E-YVKGDW 48 (542)
Q Consensus 2 gkPLa~LL~~~~AT--icHs~T~-------------------------nl~~~~k~ADIVIsAvG~---p--~-lI~~d~ 48 (542)
|+.++..|.+.|+. .+..+|. ++.+.++++||||.|+.. | . -++.++
T Consensus 139 g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~Gm~~~~~~pi~~~~ 218 (283)
T 3jyo_A 139 GNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSC 218 (283)
T ss_dssp HHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSSTTSTTSCSCSSCGGG
T ss_pred HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCCCCCCCCCCCCCHHH
Confidence 67788888888884 3333331 455667899999999963 2 1 367899
Q ss_pred ccCCeEEEeccccccCCCccCCCCeeeecccc-ccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 49 IKPGAVVIDCGINSVPDASKASGQKLVGDVQY-AEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 49 ik~GavVIDVGin~~~d~~~~~~~kl~GDVdf-~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
++++.+|+|+=.+..+. .| ..+++ .++ .-++| .-||+.+-..+.+.+.+.
T Consensus 219 l~~~~~v~DlvY~P~~T-------------~ll~~A~~-~G~-~~~~G------l~MLv~Qa~~~f~lwtg~ 269 (283)
T 3jyo_A 219 LTKDHWVGDVVYMPIET-------------ELLKAARA-LGC-ETLDG------TRMAIHQAVDAFRLFTGL 269 (283)
T ss_dssp CCTTCEEEECCCSSSSC-------------HHHHHHHH-HTC-CEECT------HHHHHHHHHHHHHHHHSC
T ss_pred hCCCCEEEEecCCCCCC-------------HHHHHHHH-CcC-eEeCc------HHHHHHHHHHHHHHHcCC
Confidence 99999999987765311 12 12222 232 22333 579988888887766543
No 96
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=82.63 E-value=1.1 Score=43.33 Aligned_cols=57 Identities=18% Similarity=0.143 Sum_probs=39.4
Q ss_pred CchHHHHHHHhCCCe-eecCC---------------CCCHHHHhhhCCEEEEeccCCCcee----c-----CcccCCeEE
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK---------------TKNIQDVVKSADILVVGIGQPEYVK----G-----DWIKPGAVV 55 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~---------------T~nl~~~~k~ADIVIsAvG~p~lI~----~-----d~ik~GavV 55 (542)
||.+++..|.+.|.. .+..+ +.++.+.++++|+||.++.+|.-++ . +++++|.+|
T Consensus 11 mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~v 90 (296)
T 2gf2_A 11 MGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLL 90 (296)
T ss_dssp THHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSGGGTCCTTCEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhHHhcCCCCCEE
Confidence 688999999888766 22222 2367788899999999998774322 1 245667777
Q ss_pred Ee
Q psy7978 56 ID 57 (542)
Q Consensus 56 ID 57 (542)
||
T Consensus 91 v~ 92 (296)
T 2gf2_A 91 ID 92 (296)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 97
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=81.30 E-value=0.68 Score=46.51 Aligned_cols=61 Identities=18% Similarity=0.048 Sum_probs=44.2
Q ss_pred CchHHHHHHHhCCC--e-eecCC-----------------CCCHHH-HhhhCCEEEEeccCCCce---e--cCcccCCeE
Q psy7978 1 MWSSLQTFWLWVLA--N-PSMSK-----------------TKNIQD-VVKSADILVVGIGQPEYV---K--GDWIKPGAV 54 (542)
Q Consensus 1 vgkPLa~LL~~~~A--T-icHs~-----------------T~nl~~-~~k~ADIVIsAvG~p~lI---~--~d~ik~Gav 54 (542)
||..++..|.+.|. + ++..+ +.++.+ .+++||+||.|+...... . ...+++|++
T Consensus 44 mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~~~i 123 (314)
T 3ggo_A 44 MGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKKLSYILSEDAT 123 (314)
T ss_dssp HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGGHHHHHHHHHHHSCTTCE
T ss_pred HHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHHHHHHHHHHhhccCCCcE
Confidence 58899999998887 5 22222 235667 789999999999865431 1 235789999
Q ss_pred EEecccc
Q psy7978 55 VIDCGIN 61 (542)
Q Consensus 55 VIDVGin 61 (542)
|+|++..
T Consensus 124 v~d~~Sv 130 (314)
T 3ggo_A 124 VTDQGSV 130 (314)
T ss_dssp EEECCSC
T ss_pred EEECCCC
Confidence 9999865
No 98
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=81.00 E-value=0.89 Score=43.66 Aligned_cols=59 Identities=12% Similarity=0.059 Sum_probs=42.0
Q ss_pred CchHHHHHHHhCCCe-eecCCCCC--------------HHHHhhhCCEEEEeccCCCcee------cCcccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTKN--------------IQDVVKSADILVVGIGQPEYVK------GDWIKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~n--------------l~~~~k~ADIVIsAvG~p~lI~------~d~ik~GavVIDVG 59 (542)
||..++..|.+ |.. .+..++++ +.+.++++|+||.++..+.-+. .+++++|.+|||++
T Consensus 12 ~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~l~~~~~vv~~s 90 (289)
T 2cvz_A 12 MGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLREGTYWVDAT 90 (289)
T ss_dssp THHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCCTTEEEEECS
T ss_pred HHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHHHHHHhhCCCCCEEEECC
Confidence 68899999988 877 33333221 3455778999999999875222 25788999999986
Q ss_pred c
Q psy7978 60 I 60 (542)
Q Consensus 60 i 60 (542)
.
T Consensus 91 ~ 91 (289)
T 2cvz_A 91 S 91 (289)
T ss_dssp C
T ss_pred C
Confidence 4
No 99
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=80.75 E-value=0.98 Score=47.99 Aligned_cols=62 Identities=18% Similarity=0.214 Sum_probs=45.6
Q ss_pred CchHHHHHHHhCCCe-eec-----------------------------------CCCCCHHHHhhhCCEEEEeccCCC--
Q psy7978 1 MWSSLQTFWLWVLAN-PSM-----------------------------------SKTKNIQDVVKSADILVVGIGQPE-- 42 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icH-----------------------------------s~T~nl~~~~k~ADIVIsAvG~p~-- 42 (542)
||.|+|..|++.|-+ ++. +.|.++++.++.||+||.|++.|-
T Consensus 19 vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvvii~Vptp~~~ 98 (446)
T 4a7p_A 19 VGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAVFIAVGTPSRR 98 (446)
T ss_dssp HHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEEEECCCCCBCT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEEEEEcCCCCcc
Confidence 589999999998765 221 124577788999999999999884
Q ss_pred --------cee------cCcccCCeEEEeccccc
Q psy7978 43 --------YVK------GDWIKPGAVVIDCGINS 62 (542)
Q Consensus 43 --------lI~------~d~ik~GavVIDVGin~ 62 (542)
.+. ...+++|++||+..+..
T Consensus 99 ~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~ 132 (446)
T 4a7p_A 99 GDGHADLSYVFAAAREIAENLTKPSVIVTKSTVP 132 (446)
T ss_dssp TTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCC
T ss_pred ccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 222 24678999999987543
No 100
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=80.61 E-value=0.61 Score=44.67 Aligned_cols=59 Identities=10% Similarity=0.138 Sum_probs=41.9
Q ss_pred CchHHHHHHHhCCCe-eecCCCC------------------------------CHHHHhhhCCEEEEeccCCCcee----
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK------------------------------NIQDVVKSADILVVGIGQPEYVK---- 45 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~------------------------------nl~~~~k~ADIVIsAvG~p~lI~---- 45 (542)
||.+|+..|.+.|.+ ++..+++ ++.+.+++||+||.|+.......
T Consensus 30 mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDvVilavp~~~~~~~~~~ 109 (245)
T 3dtt_A 30 VGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAELVVNATEGASSIAALTA 109 (245)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSEEEECSCGGGHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCEEEEccCcHHHHHHHHH
Confidence 578999999988877 3322221 34567889999999999776422
Q ss_pred --cCcccCCeEEEeccc
Q psy7978 46 --GDWIKPGAVVIDCGI 60 (542)
Q Consensus 46 --~d~ik~GavVIDVGi 60 (542)
...+ +|.+|||++.
T Consensus 110 i~~~~l-~g~ivi~~s~ 125 (245)
T 3dtt_A 110 AGAENL-AGKILVDIAN 125 (245)
T ss_dssp HCHHHH-TTSEEEECCC
T ss_pred hhhhhc-CCCEEEECCC
Confidence 2334 8999999984
No 101
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=80.44 E-value=1.9 Score=45.69 Aligned_cols=62 Identities=11% Similarity=0.188 Sum_probs=43.9
Q ss_pred CchHHHHHHHhCCCe-eecCC----------------CCCHHHH---------------hhhCCEEEEeccCCCcee---
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK----------------TKNIQDV---------------VKSADILVVGIGQPEYVK--- 45 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~----------------T~nl~~~---------------~k~ADIVIsAvG~p~lI~--- 45 (542)
||.|+|..|++.|-+ +|.-. -+.++++ .+.||+||+|++.|--.+
T Consensus 22 vGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvii~VpTp~~~~~~~ 101 (431)
T 3ojo_A 22 IGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFIIAVPTPNNDDQYR 101 (431)
T ss_dssp THHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEEECCCCCBCSSSSC
T ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEEEEeCCCccccccC
Confidence 699999999999876 33222 2234333 246999999999996221
Q ss_pred --------------cCcccCCeEEEeccccc
Q psy7978 46 --------------GDWIKPGAVVIDCGINS 62 (542)
Q Consensus 46 --------------~d~ik~GavVIDVGin~ 62 (542)
.+.+++|++|||..+..
T Consensus 102 ~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~ 132 (431)
T 3ojo_A 102 SCDISLVMRALDSILPFLKKGNTIIVESTIA 132 (431)
T ss_dssp BBCCHHHHHHHHHHGGGCCTTEEEEECSCCC
T ss_pred CccHHHHHHHHHHHHHhCCCCCEEEEecCCC
Confidence 34678999999987654
No 102
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=79.33 E-value=1.7 Score=46.82 Aligned_cols=62 Identities=13% Similarity=0.135 Sum_probs=45.6
Q ss_pred CchHHHHHHHhCCCe-eecCC--------------------CCCHHHHhh---hCCEEEEeccCCCcee------cCccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK--------------------TKNIQDVVK---SADILVVGIGQPEYVK------GDWIK 50 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~--------------------T~nl~~~~k---~ADIVIsAvG~p~lI~------~d~ik 50 (542)
||.+|+..|.+.|.+ +++.+ +.++++.++ .+|+||.++.-+.-++ ...++
T Consensus 15 MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~L~ 94 (484)
T 4gwg_A 15 MGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDDFIEKLVPLLD 94 (484)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHHHHHHHHHHhcC
Confidence 589999999998876 32222 245677776 4999999998874322 24678
Q ss_pred CCeEEEeccccc
Q psy7978 51 PGAVVIDCGINS 62 (542)
Q Consensus 51 ~GavVIDVGin~ 62 (542)
+|.+|||+|...
T Consensus 95 ~g~iIId~st~~ 106 (484)
T 4gwg_A 95 TGDIIIDGGNSE 106 (484)
T ss_dssp TTCEEEECSCCC
T ss_pred CCCEEEEcCCCC
Confidence 999999999765
No 103
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=78.48 E-value=0.62 Score=49.25 Aligned_cols=40 Identities=25% Similarity=0.553 Sum_probs=35.5
Q ss_pred CCHHHHhhhCCEEEEeccCCCceecCccc---CCeEEEecccccc
Q psy7978 22 KNIQDVVKSADILVVGIGQPEYVKGDWIK---PGAVVIDCGINSV 63 (542)
Q Consensus 22 ~nl~~~~k~ADIVIsAvG~p~lI~~d~ik---~GavVIDVGin~~ 63 (542)
.+|.+.++.||++|-+.+ |+++++|||| ++.||+++. |..
T Consensus 250 ~~L~eav~~ADV~IG~Sa-pgl~T~EmVk~Ma~~pIIfals-NPt 292 (398)
T 2a9f_A 250 GTLEDALEGADIFIGVSA-PGVLKAEWISKMAARPVIFAMA-NPI 292 (398)
T ss_dssp CSCSHHHHTTCSEEECCS-TTCCCHHHHHTSCSSCEEEECC-SSS
T ss_pred hhHHHHhccCCEEEecCC-CCCCCHHHHHhhCCCCEEEECC-CCC
Confidence 469999999999999998 9999999995 899999998 443
No 104
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=78.30 E-value=1.4 Score=43.30 Aligned_cols=60 Identities=23% Similarity=0.281 Sum_probs=43.1
Q ss_pred CchHHHHHHHhCCCe--eecCC--------------CCCHHHHhhhCCEEEEeccCCCc----eec-----CcccCCeEE
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSK--------------TKNIQDVVKSADILVVGIGQPEY----VKG-----DWIKPGAVV 55 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~--------------T~nl~~~~k~ADIVIsAvG~p~l----I~~-----d~ik~GavV 55 (542)
||.+++..|.+.|.. ++... +.++.+.++++|+||.|+..|.- +.. +++++|.+|
T Consensus 41 mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~~~v 120 (316)
T 2uyy_A 41 MGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCY 120 (316)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEE
T ss_pred HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhHhhcCCCCCEE
Confidence 478899999888766 32211 23567778899999999995542 322 568899999
Q ss_pred Eeccc
Q psy7978 56 IDCGI 60 (542)
Q Consensus 56 IDVGi 60 (542)
||++.
T Consensus 121 v~~s~ 125 (316)
T 2uyy_A 121 VDMST 125 (316)
T ss_dssp EECSC
T ss_pred EECCC
Confidence 99874
No 105
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=78.11 E-value=2.3 Score=40.99 Aligned_cols=60 Identities=13% Similarity=0.104 Sum_probs=43.7
Q ss_pred CchHHHHHHHhCCCe--eecC-------------CCCCHHHHhhhCCEEEEeccCCC----cee-----cCcccCCeEEE
Q psy7978 1 MWSSLQTFWLWVLAN--PSMS-------------KTKNIQDVVKSADILVVGIGQPE----YVK-----GDWIKPGAVVI 56 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs-------------~T~nl~~~~k~ADIVIsAvG~p~----lI~-----~d~ik~GavVI 56 (542)
||.+++..|.+.|.. ++.+ .+.++.+.++++|+||.+++.+. .+. ..++++|.+||
T Consensus 14 ~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv 93 (295)
T 1yb4_A 14 MGSPMAINLARAGHQLHVTTIGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIV 93 (295)
T ss_dssp THHHHHHHHHHTTCEEEECCSSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEE
T ss_pred HHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEEE
Confidence 688999999888776 3321 12357777889999999998875 232 24578899999
Q ss_pred eccc
Q psy7978 57 DCGI 60 (542)
Q Consensus 57 DVGi 60 (542)
|+..
T Consensus 94 ~~s~ 97 (295)
T 1yb4_A 94 DMSS 97 (295)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 8864
No 106
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=77.50 E-value=1.2 Score=45.55 Aligned_cols=61 Identities=25% Similarity=0.355 Sum_probs=40.3
Q ss_pred CchHHHHHHHhCCCe-eecCCC----------------------CCHHHHhhhCCEEEEeccCCC-----ceec---Ccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT----------------------KNIQDVVKSADILVVGIGQPE-----YVKG---DWI 49 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T----------------------~nl~~~~k~ADIVIsAvG~p~-----lI~~---d~i 49 (542)
||+-++.+|...||+ ++...+ .++.+.++.+|+||.++|.+. ++.. +.+
T Consensus 177 iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~li~~~~l~~m 256 (369)
T 2eez_A 177 VGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAPKLVTRDMLSLM 256 (369)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-------CCSCHHHHTTS
T ss_pred HHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccccchhHHHHHHHhh
Confidence 477788888888887 222111 135567788999999999774 3443 345
Q ss_pred cCCeEEEecccc
Q psy7978 50 KPGAVVIDCGIN 61 (542)
Q Consensus 50 k~GavVIDVGin 61 (542)
|+|.++||+|..
T Consensus 257 k~gg~iV~v~~~ 268 (369)
T 2eez_A 257 KEGAVIVDVAVD 268 (369)
T ss_dssp CTTCEEEECC--
T ss_pred cCCCEEEEEecC
Confidence 899999999975
No 107
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=77.39 E-value=1.8 Score=41.89 Aligned_cols=60 Identities=15% Similarity=0.199 Sum_probs=43.2
Q ss_pred CchHHHHHHHhCCCe-eecCC---------------CCCHHHHhhhCCEEEEeccCCC----ce---e--cCcccCCeEE
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK---------------TKNIQDVVKSADILVVGIGQPE----YV---K--GDWIKPGAVV 55 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~---------------T~nl~~~~k~ADIVIsAvG~p~----lI---~--~d~ik~GavV 55 (542)
||.+++..|.+.|.. .+..+ +.++.+.++++|+||.+++.+. .+ + ..++++|.+|
T Consensus 16 ~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~v 95 (299)
T 1vpd_A 16 MGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVL 95 (299)
T ss_dssp THHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEE
T ss_pred HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEE
Confidence 688999999888776 22211 2467778889999999999654 23 1 1457889999
Q ss_pred Eeccc
Q psy7978 56 IDCGI 60 (542)
Q Consensus 56 IDVGi 60 (542)
||++.
T Consensus 96 v~~s~ 100 (299)
T 1vpd_A 96 IDMSS 100 (299)
T ss_dssp EECSC
T ss_pred EECCC
Confidence 99864
No 108
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=77.23 E-value=2.3 Score=43.32 Aligned_cols=62 Identities=13% Similarity=0.228 Sum_probs=48.7
Q ss_pred CchHHHHHHHhCCCe-eecCCC------------CCHHHHhhhCCEEEEeccC----CCceecCcc---cCCeEEEeccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT------------KNIQDVVKSADILVVGIGQ----PEYVKGDWI---KPGAVVIDCGI 60 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T------------~nl~~~~k~ADIVIsAvG~----p~lI~~d~i---k~GavVIDVGi 60 (542)
||+-++.++..-|+. +++..+ .++.+++++||||+..+.- -++|+.+.+ |+|+++|++|=
T Consensus 152 IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aR 231 (334)
T 3kb6_A 152 IGSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTAR 231 (334)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSC
T ss_pred HHHHHHHhhcccCceeeecCCccchhhhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCc
Confidence 477888888888998 555433 2688999999999999864 458888755 89999999985
Q ss_pred cc
Q psy7978 61 NS 62 (542)
Q Consensus 61 n~ 62 (542)
-.
T Consensus 232 G~ 233 (334)
T 3kb6_A 232 GK 233 (334)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 109
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=75.60 E-value=3.1 Score=43.86 Aligned_cols=40 Identities=20% Similarity=0.276 Sum_probs=30.2
Q ss_pred CHHHHhhhCCEEEEeccCCCcee--------------------cCcccCCeEEEeccccc
Q psy7978 23 NIQDVVKSADILVVGIGQPEYVK--------------------GDWIKPGAVVIDCGINS 62 (542)
Q Consensus 23 nl~~~~k~ADIVIsAvG~p~lI~--------------------~d~ik~GavVIDVGin~ 62 (542)
++.+.++.||+||.|++.|.-.+ ...+++|++|||..+..
T Consensus 75 ~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~ 134 (467)
T 2q3e_A 75 NIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVP 134 (467)
T ss_dssp CHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCC
T ss_pred CHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCC
Confidence 55667889999999999876332 13578999999987654
No 110
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=75.19 E-value=1.8 Score=42.02 Aligned_cols=60 Identities=18% Similarity=0.175 Sum_probs=42.8
Q ss_pred CchHHHHHHHhCCCe-eecCC---------------CCCHHHHhhhCCEEEEeccCCCc----ee-----cCcccCCeEE
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK---------------TKNIQDVVKSADILVVGIGQPEY----VK-----GDWIKPGAVV 55 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~---------------T~nl~~~~k~ADIVIsAvG~p~l----I~-----~d~ik~GavV 55 (542)
||..++..|.+.|.. .+..+ +.++.+.++++|+||.++..+.- +. ..++++|.+|
T Consensus 15 ~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~v 94 (301)
T 3cky_A 15 MGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVI 94 (301)
T ss_dssp THHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEE
T ss_pred HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEE
Confidence 688899999888766 22222 23677788899999999987652 32 1356889999
Q ss_pred Eeccc
Q psy7978 56 IDCGI 60 (542)
Q Consensus 56 IDVGi 60 (542)
||++.
T Consensus 95 v~~~~ 99 (301)
T 3cky_A 95 VDMSS 99 (301)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 98763
No 111
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=74.10 E-value=2.1 Score=42.70 Aligned_cols=96 Identities=14% Similarity=0.141 Sum_probs=61.2
Q ss_pred CchHHHHHHHhCCCe-eecCCCCC-HHHH------------hhhCCEEEEeccCCC----ceecC----cccCCeEEEec
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTKN-IQDV------------VKSADILVVGIGQPE----YVKGD----WIKPGAVVIDC 58 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~n-l~~~------------~k~ADIVIsAvG~p~----lI~~d----~ik~GavVIDV 58 (542)
+|++++..|.+.|+. .+..+|.+ .+++ +.++||||.|++..- .++.+ .++++.+|+|+
T Consensus 129 aaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~~~~~l~~~DiVInaTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~ 208 (269)
T 3phh_A 129 SAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPKSAFDLIINATSASLHNELPLNKEVLKGYFKEGKLAYDL 208 (269)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEESSCCSSCCSEEEECCTTCCCCSCSSCHHHHHHHHHHCSEEEES
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEecHHHhccCCEEEEcccCCCCCCCCCChHHHHhhCCCCCEEEEe
Confidence 378899999999976 45566653 2222 127999999976531 36666 78899999999
Q ss_pred cccccCCCccCCCCeeeecccc-ccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHh
Q psy7978 59 GINSVPDASKASGQKLVGDVQY-AEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYID 118 (542)
Q Consensus 59 Gin~~~d~~~~~~~kl~GDVdf-~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~ 118 (542)
-.+. + + .| ..+++ .++ .-+.| .-||+.+...+.+.+.+
T Consensus 209 vY~P-~--T-----------~ll~~A~~-~G~-~~~~G------l~MLv~Qa~~~f~lw~g 247 (269)
T 3phh_A 209 AYGF-L--T-----------PFLSLAKE-LKT-PFQDG------KDMLIYQAALSFEKFSA 247 (269)
T ss_dssp CCSS-C--C-----------HHHHHHHH-TTC-CEECS------HHHHHHHHHHHHHHHTT
T ss_pred CCCC-c--h-----------HHHHHHHH-CcC-EEECC------HHHHHHHHHHHHHHHhC
Confidence 8764 2 1 13 22332 232 22333 67898888877766543
No 112
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=73.20 E-value=2.7 Score=44.44 Aligned_cols=61 Identities=21% Similarity=0.278 Sum_probs=44.3
Q ss_pred CchHHHHHHHhCCCe-eecC-----------------------------------CCCCHHHHhhhCCEEEEeccCCC--
Q psy7978 1 MWSSLQTFWLWVLAN-PSMS-----------------------------------KTKNIQDVVKSADILVVGIGQPE-- 42 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs-----------------------------------~T~nl~~~~k~ADIVIsAvG~p~-- 42 (542)
||.|+|..|.+.|.+ ++.- .|.++.+.++.||+||.|++.|-
T Consensus 13 vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvViiaVptp~~~ 92 (450)
T 3gg2_A 13 VGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADIIFIAVGTPAGE 92 (450)
T ss_dssp HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEEEECCCCCBCT
T ss_pred HHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEEEEEcCCCccc
Confidence 588999999988766 2211 23467778899999999999983
Q ss_pred -------cee------cCcccCCeEEEecccc
Q psy7978 43 -------YVK------GDWIKPGAVVIDCGIN 61 (542)
Q Consensus 43 -------lI~------~d~ik~GavVIDVGin 61 (542)
.+. ...+++|++||+..+.
T Consensus 93 ~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv 124 (450)
T 3gg2_A 93 DGSADMSYVLDAARSIGRAMSRYILIVTKSTV 124 (450)
T ss_dssp TSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred CCCcChHHHHHHHHHHHhhCCCCCEEEEeeeC
Confidence 111 2457899999998754
No 113
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=73.02 E-value=2.9 Score=44.82 Aligned_cols=62 Identities=13% Similarity=0.109 Sum_probs=45.0
Q ss_pred CchHHHHHHHhCCCe-eecCC--------------------CCCHHHHhhh---CCEEEEeccCCCc----ee--cCccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK--------------------TKNIQDVVKS---ADILVVGIGQPEY----VK--GDWIK 50 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~--------------------T~nl~~~~k~---ADIVIsAvG~p~l----I~--~d~ik 50 (542)
||.+|+..|.+.|.+ .+..+ +.++++.++. +|+||.++..+.- +. ...++
T Consensus 21 MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~ 100 (497)
T 2p4q_A 21 MGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDALINQIVPLLE 100 (497)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHHHHHHHHHHhCC
Confidence 589999999998876 22222 3467777776 9999999988632 21 24578
Q ss_pred CCeEEEeccccc
Q psy7978 51 PGAVVIDCGINS 62 (542)
Q Consensus 51 ~GavVIDVGin~ 62 (542)
+|.+|||++...
T Consensus 101 ~g~iIId~s~~~ 112 (497)
T 2p4q_A 101 KGDIIIDGGNSH 112 (497)
T ss_dssp TTCEEEECSCCC
T ss_pred CCCEEEECCCCC
Confidence 999999988543
No 114
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=72.98 E-value=3.5 Score=43.92 Aligned_cols=62 Identities=13% Similarity=0.136 Sum_probs=45.1
Q ss_pred CchHHHHHHHhCCCe-eecCC-------------------CCCHHHHhhh---CCEEEEeccCCCc----ee--cCcccC
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK-------------------TKNIQDVVKS---ADILVVGIGQPEY----VK--GDWIKP 51 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~-------------------T~nl~~~~k~---ADIVIsAvG~p~l----I~--~d~ik~ 51 (542)
||.+|+..|.+.|.+ .+..+ +.++++.++. +|+||.++..+.. +. ...+++
T Consensus 26 MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~ 105 (480)
T 2zyd_A 26 MGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDK 105 (480)
T ss_dssp HHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHHHHHHHHHGGGCCT
T ss_pred HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHHHHHHHHHhhcCC
Confidence 588999999988876 22222 2467777776 9999999988642 22 245789
Q ss_pred CeEEEeccccc
Q psy7978 52 GAVVIDCGINS 62 (542)
Q Consensus 52 GavVIDVGin~ 62 (542)
|.+|||++...
T Consensus 106 g~iIId~s~g~ 116 (480)
T 2zyd_A 106 GDIIIDGGNTF 116 (480)
T ss_dssp TCEEEECSCCC
T ss_pred CCEEEECCCCC
Confidence 99999998654
No 115
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=72.59 E-value=4.4 Score=38.45 Aligned_cols=56 Identities=23% Similarity=0.288 Sum_probs=39.6
Q ss_pred CchHHHHHHHhCCC----e-eecCC----------------CCCHHHHhhhCCEEEEeccCCCcee------cCcccCCe
Q psy7978 1 MWSSLQTFWLWVLA----N-PSMSK----------------TKNIQDVVKSADILVVGIGQPEYVK------GDWIKPGA 53 (542)
Q Consensus 1 vgkPLa~LL~~~~A----T-icHs~----------------T~nl~~~~k~ADIVIsAvG~p~lI~------~d~ik~Ga 53 (542)
||.+++..|.+.|. . .+..+ +.+..+.++++|+||.|+ +|..+. ..++++|.
T Consensus 13 mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav-~~~~~~~v~~~l~~~l~~~~ 91 (247)
T 3gt0_A 13 MGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSI-KPDLYASIINEIKEIIKNDA 91 (247)
T ss_dssp HHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECS-CTTTHHHHC---CCSSCTTC
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEe-CHHHHHHHHHHHHhhcCCCC
Confidence 57889999988875 4 22222 246777889999999999 666432 24578898
Q ss_pred EEEe
Q psy7978 54 VVID 57 (542)
Q Consensus 54 vVID 57 (542)
+||.
T Consensus 92 ~vvs 95 (247)
T 3gt0_A 92 IIVT 95 (247)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8884
No 116
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=72.08 E-value=2.5 Score=42.73 Aligned_cols=60 Identities=12% Similarity=-0.021 Sum_probs=42.9
Q ss_pred CchHHHHHHHhCCCe-eecCCCC---------------CHHHHhhhCCEEEEeccCCC---cee---cCcccCCeEEEec
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK---------------NIQDVVKSADILVVGIGQPE---YVK---GDWIKPGAVVIDC 58 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~---------------nl~~~~k~ADIVIsAvG~p~---lI~---~d~ik~GavVIDV 58 (542)
||..++..|.+.|.. ++..++. ++.+.+++||+||.|+.... ++. ...+++|++|+|+
T Consensus 27 mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~~~~~v~~~~i~~~l~~~~ivi~~ 106 (338)
T 1np3_A 27 QGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLYKEEIEPNLKKGATLAFA 106 (338)
T ss_dssp HHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHHHHHTGGGCCTTCEEEES
T ss_pred HHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcHHHHHHHHHHHHhhCCCCCEEEEc
Confidence 478888888888876 3322221 45677899999999998653 344 2467899999998
Q ss_pred cc
Q psy7978 59 GI 60 (542)
Q Consensus 59 Gi 60 (542)
+.
T Consensus 107 ~g 108 (338)
T 1np3_A 107 HG 108 (338)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 117
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=71.23 E-value=5.6 Score=40.29 Aligned_cols=96 Identities=17% Similarity=0.202 Sum_probs=60.2
Q ss_pred chHHHHHHHhCCCe--eecCCCC---------------------------CH---HHHhhhCCEEEEeccCC-----C--
Q psy7978 2 WSSLQTFWLWVLAN--PSMSKTK---------------------------NI---QDVVKSADILVVGIGQP-----E-- 42 (542)
Q Consensus 2 gkPLa~LL~~~~AT--icHs~T~---------------------------nl---~~~~k~ADIVIsAvG~p-----~-- 42 (542)
|+.++..|.+.|+. .+..+|+ ++ .+.+.++||||.|++.- .
T Consensus 160 araia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~ 239 (312)
T 3t4e_A 160 ATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNGTKVGMKPLENES 239 (312)
T ss_dssp HHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEECSSTTSTTSTTCC
T ss_pred HHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEECCcCCCCCCCCCc
Confidence 56778888888884 3334441 22 44567899999998642 1
Q ss_pred c-eecCcccCCeEEEeccccccCCCccCCCCeeeecccc-ccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHh
Q psy7978 43 Y-VKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDVQY-AEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYID 118 (542)
Q Consensus 43 l-I~~d~ik~GavVIDVGin~~~d~~~~~~~kl~GDVdf-~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~ 118 (542)
+ ++.++++++.+|+|+=.+..+ + .| ..+++ .++ .-+.| .-||+.+-..+.+.+.+
T Consensus 240 ~~~~~~~l~~~~~v~D~vY~P~~--T-----------~ll~~A~~-~G~-~~~~G------l~MLv~Qa~~af~lwtg 296 (312)
T 3t4e_A 240 LIGDVSLLRPELLVTECVYNPHM--T-----------KLLQQAQQ-AGC-KTIDG------YGMLLWQGAEQFELWTG 296 (312)
T ss_dssp SCCCGGGSCTTCEEEECCCSSSS--C-----------HHHHHHHH-TTC-EEECH------HHHHHHHHHHHHHHHHS
T ss_pred ccCCHHHcCCCCEEEEeccCCCC--C-----------HHHHHHHH-CCC-eEECc------HHHHHHHHHHHHHHHhC
Confidence 2 266899999999998776532 1 12 12222 232 22333 67998888887776654
No 118
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=70.26 E-value=3.5 Score=41.05 Aligned_cols=58 Identities=17% Similarity=0.284 Sum_probs=40.0
Q ss_pred CchHHHHHHHhCC----Ce-eecCCC-----------------CCHHHHhhhCCEEEEeccCCCcee------cCcccCC
Q psy7978 1 MWSSLQTFWLWVL----AN-PSMSKT-----------------KNIQDVVKSADILVVGIGQPEYVK------GDWIKPG 52 (542)
Q Consensus 1 vgkPLa~LL~~~~----AT-icHs~T-----------------~nl~~~~k~ADIVIsAvG~p~lI~------~d~ik~G 52 (542)
||.+++..|.+.| .. ++..++ .+..+.++++|+||.|+. |..+. ...++++
T Consensus 33 mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~~vl~~l~~~l~~~ 111 (322)
T 2izz_A 33 LAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIPFILDEIGADIEDR 111 (322)
T ss_dssp HHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHHHHHHHHGGGCCTT
T ss_pred HHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHHHHHHHHHhhcCCC
Confidence 5788998888887 33 222222 245667789999999997 55332 2356789
Q ss_pred eEEEecc
Q psy7978 53 AVVIDCG 59 (542)
Q Consensus 53 avVIDVG 59 (542)
.+|||+.
T Consensus 112 ~ivvs~s 118 (322)
T 2izz_A 112 HIVVSCA 118 (322)
T ss_dssp CEEEECC
T ss_pred CEEEEeC
Confidence 9999983
No 119
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=67.84 E-value=1.9 Score=41.42 Aligned_cols=61 Identities=20% Similarity=0.115 Sum_probs=42.5
Q ss_pred CchHHHHHHHhCCC--e-eecCC-----------------CCCHHHHhh-hCCEEEEeccCCCc---ee--cCcccCCeE
Q psy7978 1 MWSSLQTFWLWVLA--N-PSMSK-----------------TKNIQDVVK-SADILVVGIGQPEY---VK--GDWIKPGAV 54 (542)
Q Consensus 1 vgkPLa~LL~~~~A--T-icHs~-----------------T~nl~~~~k-~ADIVIsAvG~p~l---I~--~d~ik~Gav 54 (542)
||..++..|.+.|. + ++..+ +.++.+.++ ++|+||.|+..... +. ..+++++.+
T Consensus 12 mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l~~~l~~~~i 91 (281)
T 2g5c_A 12 MGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKKLSYILSEDAT 91 (281)
T ss_dssp HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHHHHHHHHSCTTCE
T ss_pred HHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHHHHHHHHHHHHhhCCCCcE
Confidence 47888888888776 4 22211 235767788 99999999986643 21 135789999
Q ss_pred EEecccc
Q psy7978 55 VIDCGIN 61 (542)
Q Consensus 55 VIDVGin 61 (542)
|+|++..
T Consensus 92 v~~~~~~ 98 (281)
T 2g5c_A 92 VTDQGSV 98 (281)
T ss_dssp EEECCSC
T ss_pred EEECCCC
Confidence 9998753
No 120
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=67.10 E-value=5.1 Score=41.74 Aligned_cols=61 Identities=13% Similarity=0.109 Sum_probs=41.4
Q ss_pred CchHHHHHHHhCCCe-eecC-----------------------------------CCCCHHHHhhhCCEEEEeccCCCc-
Q psy7978 1 MWSSLQTFWLWVLAN-PSMS-----------------------------------KTKNIQDVVKSADILVVGIGQPEY- 43 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs-----------------------------------~T~nl~~~~k~ADIVIsAvG~p~l- 43 (542)
||.|++..|.+.|.. ++.. .|.++.+.++.||+||.|++.|.-
T Consensus 11 vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvviiaVptp~~~ 90 (436)
T 1mv8_A 11 VGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVSFICVGTPSKK 90 (436)
T ss_dssp THHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEEEECCCCCBCT
T ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEEEEEcCCCccc
Confidence 689999999988766 2211 123566678899999999998862
Q ss_pred --------ee------cCcccC---CeEEEecccc
Q psy7978 44 --------VK------GDWIKP---GAVVIDCGIN 61 (542)
Q Consensus 44 --------I~------~d~ik~---GavVIDVGin 61 (542)
+. ...+++ |++||+..++
T Consensus 91 ~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv 125 (436)
T 1mv8_A 91 NGDLDLGYIETVCREIGFAIREKSERHTVVVRSTV 125 (436)
T ss_dssp TSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCC
T ss_pred CCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCc
Confidence 11 124566 7788776544
No 121
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=66.80 E-value=3.4 Score=43.90 Aligned_cols=41 Identities=24% Similarity=0.325 Sum_probs=30.7
Q ss_pred CCCHHHHhhhCCEEEEeccCCC----------cee------cCcccCCeEEEeccccc
Q psy7978 21 TKNIQDVVKSADILVVGIGQPE----------YVK------GDWIKPGAVVIDCGINS 62 (542)
Q Consensus 21 T~nl~~~~k~ADIVIsAvG~p~----------lI~------~d~ik~GavVIDVGin~ 62 (542)
|.++.+.++.||+||.|++.|- .+. .. +++|++|||..+..
T Consensus 100 ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~ 156 (432)
T 3pid_A 100 TTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIP 156 (432)
T ss_dssp ESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCC
T ss_pred EcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCC
Confidence 4467788999999999998872 110 12 78999999987654
No 122
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=64.62 E-value=6.2 Score=40.90 Aligned_cols=93 Identities=25% Similarity=0.231 Sum_probs=56.5
Q ss_pred CCCCCCEEEEEeeehhhhhcCCCCCCCCCCCCCcccCccCHHHHhccCCcccccCcccc-C--CCCCcE--EEeCCCCCC
Q psy7978 294 SGKIPDAVVLVTTVRALKMHGGGPSVVSGQPLKPEYTENTRAVLRGEDSFLLYCKLDSQ-Y--LEHPPV--TMLIYYTYT 368 (542)
Q Consensus 294 sGl~PdavVlVATvRALK~HGG~~~~~~g~p~~~~l~~en~~al~~G~~~~~~~NL~~H-~--fGvpvV--AiN~F~tDT 368 (542)
.|.+|+++|||... .|++..|.+.. |+ |.++..-.= ...|.+- . .|++|+ ++|.|.-|.
T Consensus 250 ~g~~p~~vILv~~~-~~g~i~~~~~~----~~------p~l~~~i~t-----~e~l~~~~~~~~~~~V~Gi~lN~~~~~~ 313 (349)
T 2obn_A 250 RGSQPTQLVLVHRA-GQTHNGNNPHV----PI------PPLPEVIRL-----YETVASGGGAFGTVPVVGIALNTAHLDE 313 (349)
T ss_dssp HHHCCSEEEEEEET-TCCBCSSCTTS----BC------CCHHHHHHH-----HHHHHHTTTTSCCCCEEEEEEECTTSCH
T ss_pred HHcCCCeEEEEECC-CCceECCCCcc----CC------CCHHHHHHH-----HHHHHHhhccCCCCcEEEEEEECCCCCH
Confidence 35689999999853 35555555431 22 222211111 1112111 2 578999 999999887
Q ss_pred HHHHHHHHHHHHHcCCCeEEEccccccCchhHHHHHHHHH
Q psy7978 369 PAEWEIIRKAAKQAGAHDAVVCENWAKGGAGAADLADAVI 408 (542)
Q Consensus 369 ~~Ei~~i~~~~~~~G~~~~~v~~~~a~GG~Ga~~LA~~Vv 408 (542)
+++-+.+++.-++.|+. +...+.. |+..|.++++
T Consensus 314 ~~~~~~~~~ie~~~glP---v~d~~r~---g~~~l~~~~~ 347 (349)
T 2obn_A 314 YAAKEAIAHTIAETGLP---CTDVVRF---GADVLLDAVM 347 (349)
T ss_dssp HHHHHHHHHHHHHHCSC---EECHHHH---CSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC---EEEEecC---CHHHHHHHHh
Confidence 77777777777788997 4666666 5556666654
No 123
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=63.72 E-value=5.1 Score=42.55 Aligned_cols=40 Identities=15% Similarity=0.391 Sum_probs=29.3
Q ss_pred CHHHHhhhCCEEEEeccCCCc--------------ee------cCcccCCeEEEeccccc
Q psy7978 23 NIQDVVKSADILVVGIGQPEY--------------VK------GDWIKPGAVVIDCGINS 62 (542)
Q Consensus 23 nl~~~~k~ADIVIsAvG~p~l--------------I~------~d~ik~GavVIDVGin~ 62 (542)
++.+.++.||+||.+++.|-- +. ...+++|.+|||..++.
T Consensus 79 ~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~ 138 (481)
T 2o3j_A 79 DIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVP 138 (481)
T ss_dssp CHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC
T ss_pred CHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 455678899999999998741 11 24578899999976554
No 124
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=63.29 E-value=5.8 Score=41.96 Aligned_cols=61 Identities=18% Similarity=0.142 Sum_probs=44.0
Q ss_pred CchHHHHHHHhCCCe-eecCC-------------------CCCHHHHhhh---CCEEEEeccCCCc----ee--cCcccC
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK-------------------TKNIQDVVKS---ADILVVGIGQPEY----VK--GDWIKP 51 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~-------------------T~nl~~~~k~---ADIVIsAvG~p~l----I~--~d~ik~ 51 (542)
||.+++..|.+.|.+ .+..+ +.++++.++. +|+||.++..+.- +. ...+++
T Consensus 16 mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~vl~~l~~~l~~ 95 (474)
T 2iz1_A 16 MGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPLLDI 95 (474)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHHHHHHGGGCCT
T ss_pred HHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHHHHHHHhhCCC
Confidence 588999999888766 22222 3467777776 9999999988642 22 246789
Q ss_pred CeEEEecccc
Q psy7978 52 GAVVIDCGIN 61 (542)
Q Consensus 52 GavVIDVGin 61 (542)
|.+|||++..
T Consensus 96 g~iiId~s~~ 105 (474)
T 2iz1_A 96 GDILIDGGNT 105 (474)
T ss_dssp TCEEEECSCC
T ss_pred CCEEEECCCC
Confidence 9999998854
No 125
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=62.86 E-value=3.3 Score=39.69 Aligned_cols=59 Identities=15% Similarity=0.094 Sum_probs=40.6
Q ss_pred CchHHHHHHHhCCCe-eecCC-----------------CCCHHHHhhhCCEEEEeccCCC---cee--cCcccCCeEEEe
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK-----------------TKNIQDVVKSADILVVGIGQPE---YVK--GDWIKPGAVVID 57 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~-----------------T~nl~~~~k~ADIVIsAvG~p~---lI~--~d~ik~GavVID 57 (542)
||..++..|.+.|.+ ++..+ +.++.+. +++|+||.|+.... ++. ..+++++.+|||
T Consensus 11 ~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~~~l~~~~~~~~~vv~ 89 (279)
T 2f1k_A 11 IGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQLILPTLEKLIPHLSPTAIVTD 89 (279)
T ss_dssp HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHHHHHHHHHHHGGGSCTTCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHHHHHHHHHHHHhhCCCCCEEEE
Confidence 477888888888766 22111 2356666 88999999998643 222 246788999999
Q ss_pred ccc
Q psy7978 58 CGI 60 (542)
Q Consensus 58 VGi 60 (542)
++.
T Consensus 90 ~~~ 92 (279)
T 2f1k_A 90 VAS 92 (279)
T ss_dssp CCS
T ss_pred CCC
Confidence 854
No 126
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=60.75 E-value=5.6 Score=42.37 Aligned_cols=40 Identities=28% Similarity=0.433 Sum_probs=32.6
Q ss_pred CHHHHhhhCCEEEEeccCC-CceecCc---ccCCeEEEecccccc
Q psy7978 23 NIQDVVKSADILVVGIGQP-EYVKGDW---IKPGAVVIDCGINSV 63 (542)
Q Consensus 23 nl~~~~k~ADIVIsAvG~p-~lI~~d~---ik~GavVIDVGin~~ 63 (542)
++.+.++.+||||.+++.| +++++++ ++++.+|+|+ .|..
T Consensus 256 ~L~e~l~~aDVlInaT~~~~G~~~~e~v~~m~~~~iVfDL-ynP~ 299 (439)
T 2dvm_A 256 GPQEALKDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPL-ANPV 299 (439)
T ss_dssp SHHHHHTTCSEEEECSCCCSSSSCHHHHTTSCTTCEEEEC-CSSS
T ss_pred cHHHHhccCCEEEEcCCCccCCCChHHHHhcCCCCEEEEC-CCCC
Confidence 3667788999999999995 8887765 4588999999 7764
No 127
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=60.71 E-value=5.1 Score=42.68 Aligned_cols=38 Identities=26% Similarity=0.580 Sum_probs=28.0
Q ss_pred CHHHHhhhCCEEEEeccCC---------Ccee------cCcccCCeEEEeccc
Q psy7978 23 NIQDVVKSADILVVGIGQP---------EYVK------GDWIKPGAVVIDCGI 60 (542)
Q Consensus 23 nl~~~~k~ADIVIsAvG~p---------~lI~------~d~ik~GavVIDVGi 60 (542)
++++.++.||+||.|++.| ..+. ...+++|++||+.++
T Consensus 77 d~~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ST 129 (478)
T 2y0c_A 77 DIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKST 129 (478)
T ss_dssp CHHHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred CHHHHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 4556778999999999997 2222 245788999988764
No 128
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=60.55 E-value=2.9 Score=39.04 Aligned_cols=56 Identities=14% Similarity=0.221 Sum_probs=39.4
Q ss_pred CchHHHHHHHhCCCe-eecCCCCCHHHHhhhCCEEEEeccCCCc---ee--cCcccCCeEEEeccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTKNIQDVVKSADILVVGIGQPEY---VK--GDWIKPGAVVIDCGI 60 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~nl~~~~k~ADIVIsAvG~p~l---I~--~d~ik~GavVIDVGi 60 (542)
||..++..|.+.|.+ ++..++++ .+++||+||.|+..+.+ +. ...++ +++|||+..
T Consensus 30 mG~~la~~l~~~g~~V~~~~~~~~---~~~~aD~vi~av~~~~~~~v~~~l~~~~~-~~~vi~~~~ 91 (209)
T 2raf_A 30 MGQAIGHNFEIAGHEVTYYGSKDQ---ATTLGEIVIMAVPYPALAALAKQYATQLK-GKIVVDITN 91 (209)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTCC---CSSCCSEEEECSCHHHHHHHHHHTHHHHT-TSEEEECCC
T ss_pred HHHHHHHHHHHCCCEEEEEcCCHH---HhccCCEEEEcCCcHHHHHHHHHHHHhcC-CCEEEEECC
Confidence 588999999998887 44344443 57899999999983322 21 12456 899999864
No 129
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=58.73 E-value=3.1 Score=42.54 Aligned_cols=61 Identities=8% Similarity=0.068 Sum_probs=41.7
Q ss_pred CchHHHHHHHhCCCe-eecCCC---------------CCHHHHhhh----CCEEEEeccCCCc---ee--cCcccCCeEE
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT---------------KNIQDVVKS----ADILVVGIGQPEY---VK--GDWIKPGAVV 55 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T---------------~nl~~~~k~----ADIVIsAvG~p~l---I~--~d~ik~GavV 55 (542)
||.+++..|.+.|.+ +...++ .++.+.+++ +|+||.|+....+ +. ..+ ++|++|
T Consensus 19 mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~vl~~l~~~-~~~~iv 97 (341)
T 3ktd_A 19 IGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLLDAVHTH-APNNGF 97 (341)
T ss_dssp HHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHHHHHHHHHHHHHH-CTTCCE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHHHHHHHHcc-CCCCEE
Confidence 588999999988877 333222 355666665 6999999995422 11 123 899999
Q ss_pred Eeccccc
Q psy7978 56 IDCGINS 62 (542)
Q Consensus 56 IDVGin~ 62 (542)
+|+|...
T Consensus 98 ~Dv~Svk 104 (341)
T 3ktd_A 98 TDVVSVK 104 (341)
T ss_dssp EECCSCS
T ss_pred EEcCCCC
Confidence 9998653
No 130
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=57.59 E-value=4.2 Score=39.39 Aligned_cols=61 Identities=11% Similarity=0.147 Sum_probs=41.7
Q ss_pred CchHHHHHHHhCCCe-eecCCCC--------------CHHHHhhhCCEEEEeccCCCc---ee--cCcccCCeEEEeccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK--------------NIQDVVKSADILVVGIGQPEY---VK--GDWIKPGAVVIDCGI 60 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~--------------nl~~~~k~ADIVIsAvG~p~l---I~--~d~ik~GavVIDVGi 60 (542)
||.+++..|.+.|.. ++..+++ ++.+.++++|+||.|+....+ +. ...+++|++|||+..
T Consensus 23 mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~~~~v~~~l~~~l~~~~ivv~~s~ 102 (286)
T 3c24_A 23 MGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNIIEKVAEDIVPRVRPGTIVLILDA 102 (286)
T ss_dssp HHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHHHHHHHHHHGGGSCTTCEEEESCS
T ss_pred HHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchHHHHHHHHHHHhCCCCCEEEECCC
Confidence 578999999888876 3322221 345667899999999976542 21 134688999999654
Q ss_pred c
Q psy7978 61 N 61 (542)
Q Consensus 61 n 61 (542)
.
T Consensus 103 ~ 103 (286)
T 3c24_A 103 A 103 (286)
T ss_dssp H
T ss_pred C
Confidence 3
No 131
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=56.60 E-value=5.4 Score=41.25 Aligned_cols=40 Identities=13% Similarity=0.154 Sum_probs=29.7
Q ss_pred CCHHHHhhhCCEEEEeccCCC-----------c------eecCcccCCeEEEecccccc
Q psy7978 22 KNIQDVVKSADILVVGIGQPE-----------Y------VKGDWIKPGAVVIDCGINSV 63 (542)
Q Consensus 22 ~nl~~~~k~ADIVIsAvG~p~-----------l------I~~d~ik~GavVIDVGin~~ 63 (542)
.++.+.++.||+||.|++.|- + +. . +++|++||+..++..
T Consensus 65 ~~~~~~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~-~-l~~~~iVV~~ST~~~ 121 (402)
T 1dlj_A 65 LDSKAAYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVL-S-VNSHATLIIKSTIPI 121 (402)
T ss_dssp SCHHHHHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHH-H-HCSSCEEEECSCCCT
T ss_pred CCHHHHhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHH-h-hCCCCEEEEeCCCCc
Confidence 356677889999999999982 1 22 2 789999999776653
No 132
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=55.66 E-value=6.4 Score=36.79 Aligned_cols=60 Identities=18% Similarity=0.214 Sum_probs=38.8
Q ss_pred CchHHHHHHHhCCCe-eecCCCC--------------CHHHHhhhCCEEEEeccCCCc---ee-cCcccCCeEEEecccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK--------------NIQDVVKSADILVVGIGQPEY---VK-GDWIKPGAVVIDCGIN 61 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~--------------nl~~~~k~ADIVIsAvG~p~l---I~-~d~ik~GavVIDVGin 61 (542)
+|+.++..|.+.|.. ++..++. ++.+.++++|+||.|+....+ +. ..++ +|++|||+...
T Consensus 39 ~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~~~~~~v~~l~~~~-~~~~vv~~s~g 117 (215)
T 2vns_A 39 FARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFREHYSSLCSLSDQL-AGKILVDVSNP 117 (215)
T ss_dssp HHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCGGGSGGGGGGHHHH-TTCEEEECCCC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCChHHHHHHHHHHHhc-CCCEEEEeCCC
Confidence 477888888887766 2222221 456778899999999984321 11 1122 78899998754
No 133
>2r32_A GCN4-PII/tumor necrosis factor ligand superfamily member 18 fusion protein; gitrl, glucocorticoid-induced TNF receptor ligand, cytokine; 1.95A {Saccharomyces cerevisiae} SCOP: b.22.1.1 PDB: 1ce0_A 3f86_A* 3f87_A*
Probab=55.57 E-value=14 Score=34.38 Aligned_cols=42 Identities=24% Similarity=0.461 Sum_probs=29.2
Q ss_pred CHHHHHHHHHHHHhcCCceecChHHHHHHHHHHHcCCCCCce----eEEccCCCCC
Q psy7978 427 PLLTKIQTVAREMYGVHKVDCPQPVLEKLQKLERLGYGRLTV----CMAKTALSLS 478 (542)
Q Consensus 427 ~l~eKI~~IA~~IYGA~~V~~s~~A~~~l~~~e~~G~~~lPV----CmAKTqySlS 478 (542)
.+++|||.|-.+||. .+.++++++++ .+.||- ||||---+.|
T Consensus 11 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~-~~~~~ta~e~c~~kf~~l~s 56 (166)
T 2r32_A 11 QIEDKIEEILSKIYH---------IENEIARIKKL-IGERETAKEPCMAKFGPLPS 56 (166)
T ss_dssp HHHHHHHHHHHHHHH---------HHHHHHHHHHC----------CCEEEECSTTC
T ss_pred HHHHHHHHHHHHHHH---------HHHHHHHHHHH-hccccccccchhhhcCcCch
Confidence 389999999999996 46788888887 566664 9998655444
No 134
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=55.30 E-value=7 Score=38.57 Aligned_cols=99 Identities=16% Similarity=0.136 Sum_probs=60.1
Q ss_pred CchHHHHHHHhCCCe--eecCCCCC----HHHH----------hhhCCEEEEeccCCCc---------eecCcccCCeEE
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSKTKN----IQDV----------VKSADILVVGIGQPEY---------VKGDWIKPGAVV 55 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~T~n----l~~~----------~k~ADIVIsAvG~p~l---------I~~d~ik~GavV 55 (542)
+++.++.-|...|+. .+..+|.. |.+. ..++||||++++..-. +..++++++.+|
T Consensus 130 aarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v 209 (271)
T 1npy_A 130 MAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVA 209 (271)
T ss_dssp THHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCTTCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEE
T ss_pred HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhhcccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEE
Confidence 367888888889985 44445531 1111 3568999999986531 455788899999
Q ss_pred EeccccccCCCccCCCCeeeeccccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhh
Q psy7978 56 IDCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDR 119 (542)
Q Consensus 56 IDVGin~~~d~~~~~~~kl~GDVdf~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~ 119 (542)
+|+-.+..+ -.|-...+..++-+ + .|. -||+.+-+.+.+.+.+.
T Consensus 210 ~DlvY~P~~-------------T~ll~~A~~~G~~~-i-~Gl-----~MLv~Qa~~~f~lw~g~ 253 (271)
T 1npy_A 210 FDVVAMPVE-------------TPFIRYAQARGKQT-I-SGA-----AVIVLQAVEQFELYTHQ 253 (271)
T ss_dssp EECCCSSSS-------------CHHHHHHHHTTCEE-E-CHH-----HHHHHHHHHHHHHHHSC
T ss_pred EEeecCCCC-------------CHHHHHHHHCCCEE-E-CCH-----HHHHHHHHHHHHHHhCC
Confidence 999765421 12322222233222 2 233 38988888877766543
No 135
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=55.16 E-value=4.6 Score=40.78 Aligned_cols=41 Identities=7% Similarity=0.054 Sum_probs=29.3
Q ss_pred CCCHHHHhhhCCEEEEeccCCC-----cee--cCcccCCeEEEecccc
Q psy7978 21 TKNIQDVVKSADILVVGIGQPE-----YVK--GDWIKPGAVVIDCGIN 61 (542)
Q Consensus 21 T~nl~~~~k~ADIVIsAvG~p~-----lI~--~d~ik~GavVIDVGin 61 (542)
|.++.+.++.||+||.|+...- ++. ...++++++|++...+
T Consensus 78 ~~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~ 125 (319)
T 2dpo_A 78 CTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp ECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred eCCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 4577888999999999997532 221 2457889999876654
No 136
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=54.11 E-value=7.2 Score=38.08 Aligned_cols=35 Identities=6% Similarity=0.267 Sum_probs=27.1
Q ss_pred CHHHHhhhCCEEEEeccCCCc------eecCcccCCeEEEecc
Q psy7978 23 NIQDVVKSADILVVGIGQPEY------VKGDWIKPGAVVIDCG 59 (542)
Q Consensus 23 nl~~~~k~ADIVIsAvG~p~l------I~~d~ik~GavVIDVG 59 (542)
++.+.++.+|+||.++..+.+ +. . +++|.+|||+.
T Consensus 64 ~~~~~~~~~D~vi~~v~~~~~~~v~~~i~-~-l~~~~~vv~~~ 104 (335)
T 1txg_A 64 QLEKCLENAEVVLLGVSTDGVLPVMSRIL-P-YLKDQYIVLIS 104 (335)
T ss_dssp GHHHHHTTCSEEEECSCGGGHHHHHHHHT-T-TCCSCEEEECC
T ss_pred hHHHHHhcCCEEEEcCChHHHHHHHHHHh-c-CCCCCEEEEEc
Confidence 566678899999999987753 22 3 78899999984
No 137
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=53.95 E-value=9.7 Score=36.04 Aligned_cols=58 Identities=9% Similarity=0.083 Sum_probs=39.4
Q ss_pred CchHHHHHHHhCCCe-eecCC--C-------------CCHHHHhhhCCEEEEeccCCCcee-----cCcccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK--T-------------KNIQDVVKSADILVVGIGQPEYVK-----GDWIKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~--T-------------~nl~~~~k~ADIVIsAvG~p~lI~-----~d~ik~GavVIDVG 59 (542)
||.+++..|.+.|.. ++..+ + .++.+.++++|+||.++..+..++ .+.+++ +|||+.
T Consensus 11 mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~aDvvi~~v~~~~~~~~~~~~~~~~~~--~vi~~s 88 (264)
T 1i36_A 11 VAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPGVALGAARRAGRHVRG--IYVDIN 88 (264)
T ss_dssp HHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSCGGGHHHHHHHHHTTCCS--EEEECS
T ss_pred HHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCcCCHHHHHhcCCEEEEECCCHHHHHHHHHHHHhcCc--EEEEcc
Confidence 588999999988877 33333 1 234566789999999998765322 123455 888885
Q ss_pred c
Q psy7978 60 I 60 (542)
Q Consensus 60 i 60 (542)
.
T Consensus 89 ~ 89 (264)
T 1i36_A 89 N 89 (264)
T ss_dssp C
T ss_pred C
Confidence 3
No 138
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=53.45 E-value=6.1 Score=40.89 Aligned_cols=60 Identities=17% Similarity=0.175 Sum_probs=39.8
Q ss_pred CchHHHHHHHhCCC-e-eecCCC------------------CCHHHHhhhCCEEEEeccCCCce-ecCccc---------
Q psy7978 1 MWSSLQTFWLWVLA-N-PSMSKT------------------KNIQDVVKSADILVVGIGQPEYV-KGDWIK--------- 50 (542)
Q Consensus 1 vgkPLa~LL~~~~A-T-icHs~T------------------~nl~~~~k~ADIVIsAvG~p~lI-~~d~ik--------- 50 (542)
+|+-++..|...|+ . ++..+| .++.+.++.+||||.++|.+..+ +.++++
T Consensus 178 iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~ 257 (404)
T 1gpj_A 178 MGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPVIHVDDVREALRKRDRR 257 (404)
T ss_dssp HHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCCBCHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCCCceecHHHHHHHHHhccCC
Confidence 35666677776777 3 333332 24556678899999999988754 434332
Q ss_pred CCeEEEeccc
Q psy7978 51 PGAVVIDCGI 60 (542)
Q Consensus 51 ~GavVIDVGi 60 (542)
++.++||++.
T Consensus 258 ~~~v~vdia~ 267 (404)
T 1gpj_A 258 SPILIIDIAN 267 (404)
T ss_dssp CCEEEEECCS
T ss_pred CCEEEEEccC
Confidence 5689999975
No 139
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=51.87 E-value=9.4 Score=40.47 Aligned_cols=61 Identities=13% Similarity=0.117 Sum_probs=42.9
Q ss_pred CchHHHHHHHhCCCe-eecCC--------------------CCCHHHHhh---hCCEEEEeccCCCcee------cCccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK--------------------TKNIQDVVK---SADILVVGIGQPEYVK------GDWIK 50 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~--------------------T~nl~~~~k---~ADIVIsAvG~p~lI~------~d~ik 50 (542)
||.+++..|.+.|.+ .+..+ +.++++.++ .+|+||.++..+.-++ ...++
T Consensus 13 mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl~~l~~~l~ 92 (482)
T 2pgd_A 13 MGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNFIEKLVPLLD 92 (482)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHHHHHHHHhhcC
Confidence 588999999888766 22222 235666664 8999999998863222 23578
Q ss_pred CCeEEEecccc
Q psy7978 51 PGAVVIDCGIN 61 (542)
Q Consensus 51 ~GavVIDVGin 61 (542)
+|.+|||++..
T Consensus 93 ~g~iII~~s~~ 103 (482)
T 2pgd_A 93 IGDIIIDGGNS 103 (482)
T ss_dssp TTCEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 99999998754
No 140
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=50.85 E-value=25 Score=37.64 Aligned_cols=37 Identities=22% Similarity=0.370 Sum_probs=27.7
Q ss_pred HHhhhCCEEEEeccCCCcee-----------------cCcccCCeEEEeccccc
Q psy7978 26 DVVKSADILVVGIGQPEYVK-----------------GDWIKPGAVVIDCGINS 62 (542)
Q Consensus 26 ~~~k~ADIVIsAvG~p~lI~-----------------~d~ik~GavVIDVGin~ 62 (542)
+.++.||+||.|++.|--.+ ...+++|++|||..+..
T Consensus 97 ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~ 150 (478)
T 3g79_A 97 SRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTIT 150 (478)
T ss_dssp GGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred HHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCC
Confidence 45778999999999985211 13478999999987654
No 141
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=49.13 E-value=10 Score=36.98 Aligned_cols=37 Identities=19% Similarity=0.255 Sum_probs=25.8
Q ss_pred CCHHHHhhhCCEEEEeccCCC-----cee--cCcccCCeEEEec
Q psy7978 22 KNIQDVVKSADILVVGIGQPE-----YVK--GDWIKPGAVVIDC 58 (542)
Q Consensus 22 ~nl~~~~k~ADIVIsAvG~p~-----lI~--~d~ik~GavVIDV 58 (542)
.++.+.++.||+||.|+...- ++. ...++++++|+..
T Consensus 92 ~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ 135 (302)
T 1f0y_A 92 TDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASN 135 (302)
T ss_dssp SCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEEC
T ss_pred cCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEEC
Confidence 456667889999999996532 222 2457889988864
No 142
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=48.42 E-value=13 Score=35.03 Aligned_cols=59 Identities=17% Similarity=0.213 Sum_probs=38.3
Q ss_pred CchHHHHHHHhCC----Ce--eecCC--------CCCHHHHhhhCCEEEEeccCCCcee------cCcccCCeEEEeccc
Q psy7978 1 MWSSLQTFWLWVL----AN--PSMSK--------TKNIQDVVKSADILVVGIGQPEYVK------GDWIKPGAVVIDCGI 60 (542)
Q Consensus 1 vgkPLa~LL~~~~----AT--icHs~--------T~nl~~~~k~ADIVIsAvG~p~lI~------~d~ik~GavVIDVGi 60 (542)
||..++..|.+.| .. ++... +.+..+.++++|+||.|+. |..+. ...++++.+|.|.+.
T Consensus 15 mG~~~a~~l~~~g~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~-~~~~~~v~~~l~~~l~~~~vv~~~~g 93 (262)
T 2rcy_A 15 MGSALAHGIANANIIKKENLFYYGPSKKNTTLNYMSSNEELARHCDIIVCAVK-PDIAGSVLNNIKPYLSSKLLISICGG 93 (262)
T ss_dssp HHHHHHHHHHHHTSSCGGGEEEECSSCCSSSSEECSCHHHHHHHCSEEEECSC-TTTHHHHHHHSGGGCTTCEEEECCSS
T ss_pred HHHHHHHHHHHCCCCCCCeEEEEeCCcccCceEEeCCHHHHHhcCCEEEEEeC-HHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 5788999998877 34 33221 2367888999999999998 44321 123455566666554
No 143
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=48.39 E-value=5 Score=38.70 Aligned_cols=61 Identities=16% Similarity=0.222 Sum_probs=40.6
Q ss_pred CchHHHHHHHhC--CCe-eecCC-----------------CCCHHHHhhhCCEEEEeccCCCc---ee--cCc-ccCCeE
Q psy7978 1 MWSSLQTFWLWV--LAN-PSMSK-----------------TKNIQDVVKSADILVVGIGQPEY---VK--GDW-IKPGAV 54 (542)
Q Consensus 1 vgkPLa~LL~~~--~AT-icHs~-----------------T~nl~~~~k~ADIVIsAvG~p~l---I~--~d~-ik~Gav 54 (542)
||..++..|.+. +.+ ++..+ +.++.+.++++|+||.|+..... +. ..+ ++++.+
T Consensus 17 mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l~~~~l~~~~i 96 (290)
T 3b1f_A 17 IGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKTIDFIKILADLDLKEDVI 96 (290)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHHHHHHHHHHTSCCCTTCE
T ss_pred HHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHHHHHHHHHHhcCCCCCCE
Confidence 477888888766 344 22211 23556678899999999976543 22 245 789999
Q ss_pred EEecccc
Q psy7978 55 VIDCGIN 61 (542)
Q Consensus 55 VIDVGin 61 (542)
|||++..
T Consensus 97 vi~~~~~ 103 (290)
T 3b1f_A 97 ITDAGST 103 (290)
T ss_dssp EECCCSC
T ss_pred EEECCCC
Confidence 9998753
No 144
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=48.35 E-value=12 Score=36.40 Aligned_cols=40 Identities=13% Similarity=0.273 Sum_probs=28.1
Q ss_pred CCHHHHhhhCCEEEEeccCCC-----cee--cCcccCCeEEEecccc
Q psy7978 22 KNIQDVVKSADILVVGIGQPE-----YVK--GDWIKPGAVVIDCGIN 61 (542)
Q Consensus 22 ~nl~~~~k~ADIVIsAvG~p~-----lI~--~d~ik~GavVIDVGin 61 (542)
.++.+.++.||+||.|+.-.- ++. ...+++++++++....
T Consensus 77 ~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~ 123 (283)
T 4e12_A 77 DDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST 123 (283)
T ss_dssp SCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred CCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 456677899999999997541 111 2346899999986544
No 145
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=48.18 E-value=15 Score=34.64 Aligned_cols=58 Identities=19% Similarity=0.184 Sum_probs=39.3
Q ss_pred CchHHHHHHHhCCCe--eecC---------------CCCCHHHHhhhCCEEEEeccCCCceec--CcccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLAN--PSMS---------------KTKNIQDVVKSADILVVGIGQPEYVKG--DWIKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs---------------~T~nl~~~~k~ADIVIsAvG~p~lI~~--d~ik~GavVIDVG 59 (542)
||++++..|.+.+.. ++.. .+.++.+.++++|+||.++. |..+.. ..+++|.+|||+.
T Consensus 14 mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~~v~~~l~~~~~vv~~~ 90 (259)
T 2ahr_A 14 MASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFETVLKPLHFKQPIISMA 90 (259)
T ss_dssp HHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHHHHHTTSCCCSCEEECC
T ss_pred HHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHHHHHHHhccCCEEEEeC
Confidence 477888888777654 2221 12367778889999999998 554321 2256888999983
No 146
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=51.34 E-value=4.4 Score=37.91 Aligned_cols=61 Identities=20% Similarity=0.147 Sum_probs=38.3
Q ss_pred CchHHHHHHHhCCCe-eecCCCC-------------CHHHHhhhCCEEEEeccCCCc---eecCcccCCeEEEecccc
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKTK-------------NIQDVVKSADILVVGIGQPEY---VKGDWIKPGAVVIDCGIN 61 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T~-------------nl~~~~k~ADIVIsAvG~p~l---I~~d~ik~GavVIDVGin 61 (542)
||..++..|.+.|.. ++..+++ ++.+.++++|+||.|+....+ +.-...++|++|||+..-
T Consensus 30 mG~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~aDvVilav~~~~~~~v~~l~~~~~~~ivI~~~~G 107 (201)
T 2yjz_A 30 FGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHREHYDFLAELADSLKGRVLIDVSNN 107 (201)
Confidence 577888888777655 2222211 345667899999999986532 111113568899988743
No 147
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=45.10 E-value=14 Score=37.78 Aligned_cols=37 Identities=3% Similarity=0.071 Sum_probs=26.0
Q ss_pred CCHHHHhhhCCEEEEeccCCCc---ee--cCcccCCeEEEec
Q psy7978 22 KNIQDVVKSADILVVGIGQPEY---VK--GDWIKPGAVVIDC 58 (542)
Q Consensus 22 ~nl~~~~k~ADIVIsAvG~p~l---I~--~d~ik~GavVIDV 58 (542)
.++.+.++.||+||.|+....+ ++ ..+++++++||++
T Consensus 91 ~d~~ea~~~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 91 CDLKASLEGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp SCHHHHHTTCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred CCHHHHHhcCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4777888999999999975432 11 2456777777765
No 148
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=43.95 E-value=15 Score=38.96 Aligned_cols=61 Identities=10% Similarity=0.094 Sum_probs=42.5
Q ss_pred CchHHHHHHHhCCCe-eecCC-----------------------CCCHHHHhhh---CCEEEEeccCCCc----ee--cC
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK-----------------------TKNIQDVVKS---ADILVVGIGQPEY----VK--GD 47 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~-----------------------T~nl~~~~k~---ADIVIsAvG~p~l----I~--~d 47 (542)
||.+++..|.+.|.+ .+..+ +.++++.++. +|+||.++..+.- +. ..
T Consensus 12 mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl~~l~~ 91 (478)
T 1pgj_A 12 MGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIEQLKK 91 (478)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHHHHHHHHHHHh
Confidence 588999999888766 22211 2356677764 9999999988632 21 23
Q ss_pred cccCCeEEEecccc
Q psy7978 48 WIKPGAVVIDCGIN 61 (542)
Q Consensus 48 ~ik~GavVIDVGin 61 (542)
.+++|.+|||++..
T Consensus 92 ~l~~g~iIId~sng 105 (478)
T 1pgj_A 92 VFEKGDILVDTGNA 105 (478)
T ss_dssp HCCTTCEEEECCCC
T ss_pred hCCCCCEEEECCCC
Confidence 57899999998744
No 149
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=42.88 E-value=42 Score=28.70 Aligned_cols=56 Identities=14% Similarity=-0.021 Sum_probs=37.8
Q ss_pred CCCCcE-EEeCCCCCCH--HHHHHHHHHHHHcCCCeEEEccccccCchhHHHHHHHHHHHhc
Q psy7978 354 LEHPPV-TMLIYYTYTP--AEWEIIRKAAKQAGAHDAVVCENWAKGGAGAADLADAVIKATE 412 (542)
Q Consensus 354 fGvpvV-AiN~F~tDT~--~Ei~~i~~~~~~~G~~~~~v~~~~a~GG~Ga~~LA~~Vv~a~~ 412 (542)
.++|++ .+|+..-..+ ...+.+++++++.++. +..+. ++-|+|-.+|-+.+++.+.
T Consensus 122 ~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~S--a~~~~gi~~l~~~l~~~i~ 180 (187)
T 2a9k_A 122 ENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVN-YVETS--AKTRANVDKVFFDLMREIR 180 (187)
T ss_dssp TTCCEEEEEECGGGGGGCCSCHHHHHHHHHHTTCE-EEECC--TTTCTTHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECccccccCccCHHHHHHHHHHcCCe-EEEeC--CCCCCCHHHHHHHHHHHHH
Confidence 589999 9998643221 2245567788888874 44443 4567888888888877664
No 150
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=39.50 E-value=20 Score=34.96 Aligned_cols=57 Identities=18% Similarity=0.156 Sum_probs=38.4
Q ss_pred CchHHHHHHHhCCC---e--eecCC---------------CCCHHHHhhhCCEEEEeccCCCceec------Cc-ccCCe
Q psy7978 1 MWSSLQTFWLWVLA---N--PSMSK---------------TKNIQDVVKSADILVVGIGQPEYVKG------DW-IKPGA 53 (542)
Q Consensus 1 vgkPLa~LL~~~~A---T--icHs~---------------T~nl~~~~k~ADIVIsAvG~p~lI~~------d~-ik~Ga 53 (542)
||..++.-|.+.|. . ++... +.+..+.+++||+||.|+ +|..+.. +. ++++.
T Consensus 14 mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav-~p~~~~~vl~~l~~~~l~~~~ 92 (280)
T 3tri_A 14 MARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV-KPHQIKMVCEELKDILSETKI 92 (280)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS-CGGGHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe-CHHHHHHHHHHHHhhccCCCe
Confidence 46778888887765 3 22211 136677889999999999 6665432 34 78887
Q ss_pred EEEec
Q psy7978 54 VVIDC 58 (542)
Q Consensus 54 vVIDV 58 (542)
+||.+
T Consensus 93 iiiS~ 97 (280)
T 3tri_A 93 LVISL 97 (280)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 88854
No 151
>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A
Probab=36.50 E-value=18 Score=34.88 Aligned_cols=82 Identities=13% Similarity=0.187 Sum_probs=54.3
Q ss_pred CCCCCcE-EEeCCCCCCHHHHH-HHHHHHHHcCCCeEEEccccccCchhHHHHHHHHHHHhccCC--CCcccccCCCCCH
Q psy7978 353 YLEHPPV-TMLIYYTYTPAEWE-IIRKAAKQAGAHDAVVCENWAKGGAGAADLADAVIKATELKD--KQFKYLYDIHDPL 428 (542)
Q Consensus 353 ~fGvpvV-AiN~F~tDT~~Ei~-~i~~~~~~~G~~~~~v~~~~a~GG~Ga~~LA~~Vv~a~~~~~--~~f~~lY~~~~~l 428 (542)
.+++|+| ++|+..-....++. .+.++++..|+. +..+. ++-|+|-.+|-+.+++.++.+. ..++..| ...+
T Consensus 108 ~~~~pvilv~NK~Dl~~~~~i~~~~~~l~~~lg~~-vi~~S--A~~g~gi~el~~~i~~~~~~~~~~~~~~~~y--~~~~ 182 (258)
T 3a1s_A 108 EMEKKVILAMTAIDEAKKTGMKIDRYELQKHLGIP-VVFTS--SVTGEGLEELKEKIVEYAQKNTILHRMILDY--GEKV 182 (258)
T ss_dssp TTTCCEEEEEECHHHHHHTTCCBCHHHHHHHHCSC-EEECC--TTTCTTHHHHHHHHHHHHHSSSCSCCCCCCC--CHHH
T ss_pred hcCCCEEEEEECcCCCCccchHHHHHHHHHHcCCC-EEEEE--eeCCcCHHHHHHHHHHHhhccccCCCcccCC--chhH
Confidence 4689999 99975321111110 145677788985 54443 4678999999999998875321 1344456 3468
Q ss_pred HHHHHHHHHHH
Q psy7978 429 LTKIQTVAREM 439 (542)
Q Consensus 429 ~eKI~~IA~~I 439 (542)
++.|+.|...+
T Consensus 183 ~~~i~~~~~~~ 193 (258)
T 3a1s_A 183 ESEIKKVENFL 193 (258)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998887
No 152
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=36.42 E-value=10 Score=35.95 Aligned_cols=61 Identities=11% Similarity=0.163 Sum_probs=41.3
Q ss_pred CchHHHHHHHhCCCe--eecCC----------------CCCHHHHhhhCCEEEEeccCCCc---ee--cCcccCCeEEEe
Q psy7978 1 MWSSLQTFWLWVLAN--PSMSK----------------TKNIQDVVKSADILVVGIGQPEY---VK--GDWIKPGAVVID 57 (542)
Q Consensus 1 vgkPLa~LL~~~~AT--icHs~----------------T~nl~~~~k~ADIVIsAvG~p~l---I~--~d~ik~GavVID 57 (542)
||..++..|.+.|.. .+..+ +.++.+.++++|+||.|+..... +. ..++++|++|||
T Consensus 21 mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 21 LATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSAFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp HHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHHHHHHHHHHHhhcCCCcEEEE
Confidence 477888888777655 12222 13556667889999999987642 22 245679999999
Q ss_pred cccc
Q psy7978 58 CGIN 61 (542)
Q Consensus 58 VGin 61 (542)
+...
T Consensus 101 ~s~~ 104 (266)
T 3d1l_A 101 TAGS 104 (266)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 9654
No 153
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=36.33 E-value=14 Score=37.20 Aligned_cols=37 Identities=19% Similarity=0.242 Sum_probs=26.1
Q ss_pred CHHHHhhhCCEEEEeccCCCc---ee--cC----cccCCeEEEecc
Q psy7978 23 NIQDVVKSADILVVGIGQPEY---VK--GD----WIKPGAVVIDCG 59 (542)
Q Consensus 23 nl~~~~k~ADIVIsAvG~p~l---I~--~d----~ik~GavVIDVG 59 (542)
++.+.++.||+||.|+....+ +. .. .++++.+||++-
T Consensus 96 ~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~ 141 (375)
T 1yj8_A 96 DLASVINDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLT 141 (375)
T ss_dssp STHHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECC
T ss_pred CHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeC
Confidence 355667889999999985432 11 23 678899999874
No 154
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=35.98 E-value=1e+02 Score=30.65 Aligned_cols=105 Identities=16% Similarity=0.218 Sum_probs=71.2
Q ss_pred CCCCCcE-EEeC----CCCCCHHHHHHHHH---HHHHcCCCeEEEccccccCchhHHHHHHHHHHHhccCCCCcccccCC
Q psy7978 353 YLEHPPV-TMLI----YYTYTPAEWEIIRK---AAKQAGAHDAVVCENWAKGGAGAADLADAVIKATELKDKQFKYLYDI 424 (542)
Q Consensus 353 ~fGvpvV-AiN~----F~tDT~~Ei~~i~~---~~~~~G~~~~~v~~~~a~GG~Ga~~LA~~Vv~a~~~~~~~f~~lY~~ 424 (542)
...+|+. -|.- |. -|++|++..++ .|+++|+. -+|-..-..-|.=-.+.-+.+++++..-+-.|+-.+|.
T Consensus 49 ~~~ipv~vMIRPR~GdF~-Ys~~E~~~M~~Di~~~~~~Gad-GvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAfD~ 126 (256)
T 1twd_A 49 RVTIPVHPIIRPRGGDFC-YSDGEFAAILEDVRTVRELGFP-GLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDM 126 (256)
T ss_dssp HCCSCEEEBCCSSSSCSC-CCHHHHHHHHHHHHHHHHTTCS-EEEECCBCTTSSBCHHHHHHHHHHHTTSEEEECGGGGG
T ss_pred HcCCceEEEECCCCCCCc-CCHHHHHHHHHHHHHHHHcCCC-EEEEeeECCCCCcCHHHHHHHHHHhCCCcEEEECchhc
Confidence 3678888 5542 53 47999888876 68899996 45555555555555666678888885311148889988
Q ss_pred CCCHHHHHHHHHHHHhcCCceecC------hHHHHHHHHHHHc
Q psy7978 425 HDPLLTKIQTVAREMYGVHKVDCP------QPVLEKLQKLERL 461 (542)
Q Consensus 425 ~~~l~eKI~~IA~~IYGA~~V~~s------~~A~~~l~~~e~~ 461 (542)
-....+-++.+.. +|-+.|==| .+-...|+++.+.
T Consensus 127 ~~d~~~ale~L~~--lG~~rILTSG~~~~a~~g~~~L~~Lv~~ 167 (256)
T 1twd_A 127 CANPLYTLNNLAE--LGIARVLTSGQKSDALQGLSKIMELIAH 167 (256)
T ss_dssp CSCHHHHHHHHHH--HTCCEEEECTTSSSTTTTHHHHHHHHTS
T ss_pred cCCHHHHHHHHHH--cCCCEEECCCCCCCHHHHHHHHHHHHHh
Confidence 8778888999988 487777655 3334555555543
No 155
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=35.14 E-value=33 Score=33.59 Aligned_cols=37 Identities=22% Similarity=0.343 Sum_probs=23.4
Q ss_pred CCHHHHhhhCCEEEEeccCCCc---ee--cCcccCCeEEEec
Q psy7978 22 KNIQDVVKSADILVVGIGQPEY---VK--GDWIKPGAVVIDC 58 (542)
Q Consensus 22 ~nl~~~~k~ADIVIsAvG~p~l---I~--~d~ik~GavVIDV 58 (542)
.++.+.++.+|+||.|+..... +. ...+++|.+||+.
T Consensus 67 ~~~~~~~~~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 67 SDIGLAVKDADVILIVVPAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp SCHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred CCHHHHHhcCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEc
Confidence 3566667788888888876653 11 1345666766665
No 156
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=34.40 E-value=28 Score=32.84 Aligned_cols=58 Identities=10% Similarity=0.002 Sum_probs=39.6
Q ss_pred CchHHHHHHHhCCCe-eecCCC----------------------CCHHHHhhhCCEEEEeccCCCcee-----cCcccCC
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSKT----------------------KNIQDVVKSADILVVGIGQPEYVK-----GDWIKPG 52 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~T----------------------~nl~~~~k~ADIVIsAvG~p~lI~-----~d~ik~G 52 (542)
||.+++..|.+.|.. .+..++ .+..+.++.+|+||.++....+-. ...++++
T Consensus 11 ~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~~ 90 (291)
T 1ks9_A 11 LGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVT 90 (291)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHHHHHHHHTTSCTT
T ss_pred HHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHHhHHHHHHHHHhhCCCC
Confidence 578899999888765 111111 122356788999999999876411 2457889
Q ss_pred eEEEec
Q psy7978 53 AVVIDC 58 (542)
Q Consensus 53 avVIDV 58 (542)
.+|||+
T Consensus 91 ~~vv~~ 96 (291)
T 1ks9_A 91 TPILLI 96 (291)
T ss_dssp SCEEEE
T ss_pred CEEEEe
Confidence 999997
No 157
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=33.57 E-value=16 Score=34.93 Aligned_cols=30 Identities=13% Similarity=0.099 Sum_probs=22.3
Q ss_pred hCCEEEEeccCCCc---ee--cCcccCCeEEEecc
Q psy7978 30 SADILVVGIGQPEY---VK--GDWIKPGAVVIDCG 59 (542)
Q Consensus 30 ~ADIVIsAvG~p~l---I~--~d~ik~GavVIDVG 59 (542)
.+|+||.++....+ +. ...++++.+||++.
T Consensus 74 ~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 74 QVDLIIALTKAQQLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp CCSEEEECSCHHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred CCCEEEEEeccccHHHHHHHHHHhcCCCCEEEEec
Confidence 89999999986532 11 24578899999984
No 158
>1xd7_A YWNA; structural genomics, protein structure initiative, winged HE binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=33.16 E-value=22 Score=31.43 Aligned_cols=17 Identities=12% Similarity=0.118 Sum_probs=14.4
Q ss_pred CHHHHHHHcCCCccccc
Q psy7978 152 DINQLAQEIGLHVSEVS 168 (542)
Q Consensus 152 ~I~~ia~~lgl~~~~l~ 168 (542)
++.+||++++|++..++
T Consensus 25 s~~~IA~~~~i~~~~l~ 41 (145)
T 1xd7_A 25 SSEIIADSVNTNPVVVR 41 (145)
T ss_dssp CHHHHHHHHTSCHHHHH
T ss_pred CHHHHHHHHCcCHHHHH
Confidence 89999999999976544
No 159
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=31.46 E-value=68 Score=34.12 Aligned_cols=53 Identities=19% Similarity=0.252 Sum_probs=41.4
Q ss_pred HHHHHHHhCCCe-eecC----------------CCCCHHHHhhhCCEEEEeccCCCceecCcccCCeEEEec
Q psy7978 4 SLQTFWLWVLAN-PSMS----------------KTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDC 58 (542)
Q Consensus 4 PLa~LL~~~~AT-icHs----------------~T~nl~~~~k~ADIVIsAvG~p~lI~~d~ik~GavVIDV 58 (542)
.+...|.++||+ .+|= ...++.+.++.||.||.++.-+.|-.-|| ++.+|||.
T Consensus 357 ~ii~~L~~~Ga~V~~~DP~~~~~~~~~~~~~~~~~~~~~~a~~~aDavvi~t~h~ef~~ld~--~~~vv~D~ 426 (444)
T 3vtf_A 357 EVARLLLERGARVYVHDPMAMEKARAVLGDSVTYVEDPQALLDQVEGVIIATAWPQYEGLDY--RGKVVVDG 426 (444)
T ss_dssp HHHHHHHHTTCEEEEECSSTHHHHHHHHGGGSEECSCHHHHHHHCSEEEECSCCGGGGGSCC--TTCEEEES
T ss_pred HHHHHHHHCCCEEEEECCCCChHHHHhcCCCceecCCHHHHHhCCCEEEEccCCHHHhCCCc--CCCEEEEC
Confidence 467788889998 3321 12478888999999999999999977776 57899994
No 160
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=31.24 E-value=59 Score=34.27 Aligned_cols=56 Identities=11% Similarity=0.085 Sum_probs=41.4
Q ss_pred HHHHHHHhC-CCe-eec-------CCCCCHHHHhhhCCEEEEeccCCCceecCc--cc--CCeEEEecc
Q psy7978 4 SLQTFWLWV-LAN-PSM-------SKTKNIQDVVKSADILVVGIGQPEYVKGDW--IK--PGAVVIDCG 59 (542)
Q Consensus 4 PLa~LL~~~-~AT-icH-------s~T~nl~~~~k~ADIVIsAvG~p~lI~~d~--ik--~GavVIDVG 59 (542)
++...|.++ ||+ .+| ....++.+.++.||+||.++.-+.|-..+| ++ .+.+|||.-
T Consensus 339 ~i~~~L~~~~g~~V~~~DP~~~~~~~~~~~~~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~i~D~r 407 (431)
T 3ojo_A 339 DIYELLNQEPDIEVCAYDPHVELDFVEHDMSHAVKDASLVLILSDHSEFKNLSDSHFDKMKHKVIFDTK 407 (431)
T ss_dssp HHHHHHHHSTTCEEEEECSSCCCTTBCSTTHHHHTTCSEEEECSCCGGGTSCCGGGGTTCSSCEEEESS
T ss_pred HHHHHHHhhcCCEEEEECCCcccccccCCHHHHHhCCCEEEEecCCHHHhccCHHHHHhCCCCEEEECC
Confidence 567788888 999 333 123578899999999999999999854443 41 367999954
No 161
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=30.46 E-value=16 Score=36.46 Aligned_cols=58 Identities=14% Similarity=0.127 Sum_probs=39.0
Q ss_pred CchHHHHHHHhCCCe-eecCC----------------------CCCHHHHhhhCCEEEEeccCCCceecCccc-----CC
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK----------------------TKNIQDVVKSADILVVGIGQPEYVKGDWIK-----PG 52 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~----------------------T~nl~~~~k~ADIVIsAvG~p~lI~~d~ik-----~G 52 (542)
||.++|..|+ .|.. +..-. +.++++ +++||+||.|+...--++...++ +|
T Consensus 23 MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk~~l~~~l~~~~~ 100 (293)
T 1zej_A 23 MGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTKVEVLREVERLTN 100 (293)
T ss_dssp HHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHHHHHHHHHhcCCC
Confidence 5889999999 8876 33222 224444 78999999999887644443321 89
Q ss_pred eEEE-eccc
Q psy7978 53 AVVI-DCGI 60 (542)
Q Consensus 53 avVI-DVGi 60 (542)
++++ |.++
T Consensus 101 ~IlasntSt 109 (293)
T 1zej_A 101 APLCSNTSV 109 (293)
T ss_dssp SCEEECCSS
T ss_pred CEEEEECCC
Confidence 8886 4443
No 162
>2eo2_A Adult MALE hypothalamus cDNA, riken FULL-length enriched library, clone:A230045M11...; FTHFSDC1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=30.08 E-value=4.2 Score=33.24 Aligned_cols=22 Identities=45% Similarity=0.646 Sum_probs=19.4
Q ss_pred hhHhcccCCCCceEeeeecccc
Q psy7978 265 ARMFHEATQTDQQLYSRLVPTI 286 (542)
Q Consensus 265 n~i~~~n~l~d~i~w~R~~d~n 286 (542)
.+|||++++.|+.+|+|+++..
T Consensus 2 ~~mfHE~TQsD~aLy~RLVP~~ 23 (71)
T 2eo2_A 2 SSGSSGSTQTDKALYNRLVPLV 23 (71)
T ss_dssp CCCSCCSSCSHHHHHHHHSCCS
T ss_pred CccccccccchHHHHHhhCCCC
Confidence 4789999999999999999964
No 163
>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} SCOP: c.37.1.8 d.52.3.1 PDB: 1x1l_X 3ieu_A* 1x18_X
Probab=29.58 E-value=2.1e+02 Score=27.87 Aligned_cols=57 Identities=19% Similarity=0.082 Sum_probs=39.1
Q ss_pred CCCCcE-EEeCCCCCC-HHHH-HHHHHHHHHcCCCeEEEccccccCchhHHHHHHHHHHHhc
Q psy7978 354 LEHPPV-TMLIYYTYT-PAEW-EIIRKAAKQAGAHDAVVCENWAKGGAGAADLADAVIKATE 412 (542)
Q Consensus 354 fGvpvV-AiN~F~tDT-~~Ei-~~i~~~~~~~G~~~~~v~~~~a~GG~Ga~~LA~~Vv~a~~ 412 (542)
.+.|++ ++|+-.... .+++ +.+.++++..|...+. ..-+.-|+|-.+|.+.+.+.+.
T Consensus 115 ~~~P~ilvlNK~D~~~~~~~~~~~l~~l~~~~~~~~~i--~iSA~~g~~v~~l~~~i~~~l~ 174 (301)
T 1ega_A 115 GKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIV--PISAETGLNVDTIAAIVRKHLP 174 (301)
T ss_dssp SSSCEEEEEESTTTCCCHHHHHHHHHHHHTTSCCSEEE--ECCTTTTTTHHHHHHHHHTTCC
T ss_pred cCCCEEEEEECcccCccHHHHHHHHHHHHHhcCcCceE--EEECCCCCCHHHHHHHHHHhCC
Confidence 679999 999976655 4444 5566666656653222 3345678899999999887664
No 164
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=29.46 E-value=26 Score=37.26 Aligned_cols=21 Identities=19% Similarity=0.552 Sum_probs=17.6
Q ss_pred CCCHHHHhhhCCEEEEeccCC
Q psy7978 21 TKNIQDVVKSADILVVGIGQP 41 (542)
Q Consensus 21 T~nl~~~~k~ADIVIsAvG~p 41 (542)
|.+..+.++.||++|.+||-|
T Consensus 88 tt~~~~ai~~ad~~~I~VpTP 108 (444)
T 3vtf_A 88 AESAEEAVAATDATFIAVGTP 108 (444)
T ss_dssp CSSHHHHHHTSSEEEECCCCC
T ss_pred EcCHHHHHhcCCceEEEecCC
Confidence 456777788999999999987
No 165
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=28.28 E-value=51 Score=32.04 Aligned_cols=54 Identities=9% Similarity=0.080 Sum_probs=36.8
Q ss_pred CchHHHHHHHhCCCeeecCCCCCHHHHhhhCCEEEEeccCCCc---ee--cCcccCCeEEEecc
Q psy7978 1 MWSSLQTFWLWVLANPSMSKTKNIQDVVKSADILVVGIGQPEY---VK--GDWIKPGAVVIDCG 59 (542)
Q Consensus 1 vgkPLa~LL~~~~ATicHs~T~nl~~~~k~ADIVIsAvG~p~l---I~--~d~ik~GavVIDVG 59 (542)
||.+|+..|.+.|.++.-...+ +.+++|| |.|+....+ +. ...+++|++|+|+.
T Consensus 17 ~G~sLA~~L~~~G~~V~~~~~~---~~~~~aD--ilavP~~ai~~vl~~l~~~l~~g~ivvd~s 75 (232)
T 3dfu_A 17 STVNMAEKLDSVGHYVTVLHAP---EDIRDFE--LVVIDAHGVEGYVEKLSAFARRGQMFLHTS 75 (232)
T ss_dssp CCSCHHHHHHHTTCEEEECSSG---GGGGGCS--EEEECSSCHHHHHHHHHTTCCTTCEEEECC
T ss_pred HHHHHHHHHHHCCCEEEEecCH---HHhccCC--EEEEcHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 6899999999998882211111 3378999 777766543 21 24678999999963
No 166
>1wn9_A The hypothetical protein (TT1805); thermus thermophillus, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.58A {Thermus thermophilus} SCOP: d.319.1.1 PDB: 1wna_A
Probab=28.00 E-value=7.3 Score=35.07 Aligned_cols=34 Identities=26% Similarity=0.447 Sum_probs=24.5
Q ss_pred CCCcEEeehH-H---------HHHhhc-ccceeeeecCCCCCcccccccC
Q psy7978 189 QDGKYIILFL-K---------LLLLDF-GYTFACVRQPSQGPTFGIKGGA 227 (542)
Q Consensus 189 ~~gklilVTa-~---------aL~~~l-~~~~~~lRePSlGPvFGiKGGA 227 (542)
|.+|++|||- | .|- +. |+.+ |-++-.||-|| +|+
T Consensus 27 p~~~v~liTDwQd~R~~ARYa~ll-~~gk~~l--lt~dAFGPafg--~G~ 71 (131)
T 1wn9_A 27 SEAKVYLITDWQDKRDQARYALLL-HTGKKDL--LVPDAFGPAFP--GGE 71 (131)
T ss_dssp TTCEEEEEEECCSSGGGCCEEEEE-ECSSCEE--EEEEEESTTST--THH
T ss_pred CCceEEEEecccccchhhhhhhee-ecCCccc--ccccccCCCcc--cHH
Confidence 6799999998 2 231 44 5555 66889999999 553
No 167
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=27.05 E-value=21 Score=38.19 Aligned_cols=56 Identities=29% Similarity=0.423 Sum_probs=41.2
Q ss_pred HHHHHHHhCCCe-eec----------CCCCCHHHHhhhCCEEEEeccCCCceecC--ccc-----CCeEEEecc
Q psy7978 4 SLQTFWLWVLAN-PSM----------SKTKNIQDVVKSADILVVGIGQPEYVKGD--WIK-----PGAVVIDCG 59 (542)
Q Consensus 4 PLa~LL~~~~AT-icH----------s~T~nl~~~~k~ADIVIsAvG~p~lI~~d--~ik-----~GavVIDVG 59 (542)
++...|.++||+ .+| ....++.+.++.||+||.++.-+.|-..| .++ +..+|||.-
T Consensus 377 ~i~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~~~i~D~r 450 (478)
T 3g79_A 377 PYRDLCLKAGASVMVHDPYVVNYPGVEISDNLEEVVRNADAIVVLAGHSAYSSLKADWAKKVSAKANPVIIDGR 450 (478)
T ss_dssp HHHHHHHHHTCEEEEECSSCCCBTTBCEESCHHHHHTTCSEEEECSCCHHHHSCCHHHHHHHHCCSSCEEEESS
T ss_pred HHHHHHHHCCCEEEEECCCcccccCcceecCHHHHHhcCCEEEEecCCHHHHhhhHHHHHHHhccCCCEEEECC
Confidence 567788888998 333 11357889999999999999999985443 343 378999943
No 168
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=26.51 E-value=32 Score=36.76 Aligned_cols=38 Identities=11% Similarity=0.135 Sum_probs=25.7
Q ss_pred CHHHHhhhCCEEEEeccCCCcee-------cCcccCCeEEEecccc
Q psy7978 23 NIQDVVKSADILVVGIGQPEYVK-------GDWIKPGAVVIDCGIN 61 (542)
Q Consensus 23 nl~~~~k~ADIVIsAvG~p~lI~-------~d~ik~GavVIDVGin 61 (542)
+++ .+++||+||.|+...--++ .+.+++++++++...+
T Consensus 124 dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSs 168 (460)
T 3k6j_A 124 DFH-KLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSS 168 (460)
T ss_dssp CGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS
T ss_pred CHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCC
Confidence 453 5789999999998532222 2457889988875543
No 169
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=26.31 E-value=53 Score=34.68 Aligned_cols=56 Identities=21% Similarity=0.116 Sum_probs=40.1
Q ss_pred HHHHHHHhCCCe-eec---------------CCCCCHHHHhhhCCEEEEeccCCCceecC--ccc---CCeEEEecc
Q psy7978 4 SLQTFWLWVLAN-PSM---------------SKTKNIQDVVKSADILVVGIGQPEYVKGD--WIK---PGAVVIDCG 59 (542)
Q Consensus 4 PLa~LL~~~~AT-icH---------------s~T~nl~~~~k~ADIVIsAvG~p~lI~~d--~ik---~GavVIDVG 59 (542)
++...|.++||+ .+| ....++.+.++.||.||.++.-+.|-..+ .++ .+.+|||.-
T Consensus 346 ~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~i~D~r 422 (446)
T 4a7p_A 346 SIIAALQDAGATVKAYDPEGVEQASKMLTDVEFVENPYAAADGADALVIVTEWDAFRALDLTRIKNSLKSPVLVDLR 422 (446)
T ss_dssp HHHHHHHHTSCEEEEECSSCHHHHGGGCSSCCBCSCHHHHHTTBSEEEECSCCTTTTSCCHHHHHTTBSSCBEECSS
T ss_pred HHHHHHHHCCCEEEEECCCCCHhHHHhcCCceEecChhHHhcCCCEEEEeeCCHHhhcCCHHHHHHhcCCCEEEECC
Confidence 567788889998 222 11346788899999999999999984433 343 256899944
No 170
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=26.14 E-value=10 Score=37.88 Aligned_cols=37 Identities=16% Similarity=0.302 Sum_probs=25.3
Q ss_pred CHHHHhhhCCEEEEeccCCCc---eec------CcccC-CeEEEecc
Q psy7978 23 NIQDVVKSADILVVGIGQPEY---VKG------DWIKP-GAVVIDCG 59 (542)
Q Consensus 23 nl~~~~k~ADIVIsAvG~p~l---I~~------d~ik~-GavVIDVG 59 (542)
++.+.++.+|+||.++....+ +.. ..+++ |.+|||+.
T Consensus 78 ~~~~~~~~aDvVilav~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~ 124 (366)
T 1evy_A 78 DVEKAYNGAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCT 124 (366)
T ss_dssp CHHHHHTTCSSEEECCCHHHHHHHHHHHCHHHHHHHHHHTCCEEECC
T ss_pred CHHHHHcCCCEEEECCChHHHHHHHHHhHHHHHHhcCccCCEEEEEC
Confidence 566778899999999975321 211 24567 88888874
No 171
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=25.60 E-value=48 Score=32.69 Aligned_cols=57 Identities=14% Similarity=0.159 Sum_probs=36.6
Q ss_pred CchHHHHHHHhCCCe-eecCC--------------------------CCCHHHHhhhCCEEEEeccCCCceec--Cccc-
Q psy7978 1 MWSSLQTFWLWVLAN-PSMSK--------------------------TKNIQDVVKSADILVVGIGQPEYVKG--DWIK- 50 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-icHs~--------------------------T~nl~~~~k~ADIVIsAvG~p~lI~~--d~ik- 50 (542)
||.+++..|.+.|.. .+..+ +.++.+ ++.+|+||.++....+ .. +.++
T Consensus 25 mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~~~~-~~v~~~l~~ 102 (335)
T 1z82_A 25 WGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPVQYI-REHLLRLPV 102 (335)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCGGGH-HHHHTTCSS
T ss_pred HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCHHHH-HHHHHHhCc
Confidence 578899999888766 22111 124555 7789999999975332 21 1133
Q ss_pred CCeEEEecc
Q psy7978 51 PGAVVIDCG 59 (542)
Q Consensus 51 ~GavVIDVG 59 (542)
+|.+||++-
T Consensus 103 ~~~~vv~~~ 111 (335)
T 1z82_A 103 KPSMVLNLS 111 (335)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEEEe
Confidence 688888875
No 172
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=24.13 E-value=63 Score=31.19 Aligned_cols=40 Identities=20% Similarity=0.186 Sum_probs=34.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEccccccCchhHHHHHHHH
Q psy7978 365 YTYTPAEWEIIRKAAKQAGAHDAVVCENWAKGGAGAADLADAV 407 (542)
Q Consensus 365 ~tDT~~Ei~~i~~~~~~~G~~~~~v~~~~a~GG~Ga~~LA~~V 407 (542)
+..|++=++++.+.+++.|+..+++.+. -|+.|..+++.+
T Consensus 25 ~eNT~~tl~la~era~e~~Ik~iVVAS~---sG~TA~k~~e~~ 64 (201)
T 1vp8_A 25 RENTEETLRLAVERAKELGIKHLVVASS---YGDTAMKALEMA 64 (201)
T ss_dssp GGGHHHHHHHHHHHHHHHTCCEEEEECS---SSHHHHHHHHHC
T ss_pred cccHHHHHHHHHHHHHHcCCCEEEEEeC---CChHHHHHHHHh
Confidence 4578888999999999999998887766 899988888865
No 173
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=23.55 E-value=54 Score=30.42 Aligned_cols=60 Identities=13% Similarity=0.096 Sum_probs=36.6
Q ss_pred CchHHHHHHHhCCCe-ee-cCCCC----------------CHHHHhhhCCEEEEeccCCCceec--Ccc--cCCeEEEec
Q psy7978 1 MWSSLQTFWLWVLAN-PS-MSKTK----------------NIQDVVKSADILVVGIGQPEYVKG--DWI--KPGAVVIDC 58 (542)
Q Consensus 1 vgkPLa~LL~~~~AT-ic-Hs~T~----------------nl~~~~k~ADIVIsAvG~p~lI~~--d~i--k~GavVIDV 58 (542)
||..++..|.+.|.. ++ ..+++ +..+.++++|+||.|+. |..+.. +.+ .+|.+|||+
T Consensus 34 mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp-~~~~~~v~~~l~~~~~~ivi~~ 112 (220)
T 4huj_A 34 IGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVP-YDSIADIVTQVSDWGGQIVVDA 112 (220)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESC-GGGHHHHHTTCSCCTTCEEEEC
T ss_pred HHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCC-hHHHHHHHHHhhccCCCEEEEc
Confidence 478888889888876 22 33332 22344678999999995 332210 001 257888887
Q ss_pred ccc
Q psy7978 59 GIN 61 (542)
Q Consensus 59 Gin 61 (542)
...
T Consensus 113 ~~g 115 (220)
T 4huj_A 113 SNA 115 (220)
T ss_dssp CCC
T ss_pred CCC
Confidence 643
No 174
>1wi9_A Protein C20ORF116 homolog; helix-turn-helix motif, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.4.5.47
Probab=23.44 E-value=45 Score=27.31 Aligned_cols=24 Identities=17% Similarity=0.290 Sum_probs=19.1
Q ss_pred HHhhcCCCCHHHHHHHcCCCcccc
Q psy7978 144 IARAQDPKDINQLAQEIGLHVSEV 167 (542)
Q Consensus 144 ia~~~~~~~I~~ia~~lgl~~~~l 167 (542)
--...+.-+++++|.++|+.-++.
T Consensus 15 yIk~~Kvv~LedLA~~F~l~t~~~ 38 (72)
T 1wi9_A 15 YIKKSKVVLLEDLAFQMGLRTQDA 38 (72)
T ss_dssp HHHHCSEECHHHHHHHHCSCHHHH
T ss_pred HHHHcCeeeHHHHHHHhCCChHHH
Confidence 334567789999999999998765
No 175
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=21.92 E-value=37 Score=30.70 Aligned_cols=41 Identities=15% Similarity=0.264 Sum_probs=27.8
Q ss_pred CchHHHHHHH-hCCCe-eecCCCC-------------------------CHHHHhhhCCEEEEeccCC
Q psy7978 1 MWSSLQTFWL-WVLAN-PSMSKTK-------------------------NIQDVVKSADILVVGIGQP 41 (542)
Q Consensus 1 vgkPLa~LL~-~~~AT-icHs~T~-------------------------nl~~~~k~ADIVIsAvG~p 41 (542)
+|+.++..|+ ++|++ ++..+++ ++.+.++..|+||.++|..
T Consensus 17 iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 17 IAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp HHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred HHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 5788999898 78888 3332221 2345667788888888865
No 176
>1tvl_A Protein YTNJ; beta-alpha barrel, structural genomics, PSI, protein structu initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.1.16.4 PDB: 1yw1_A*
Probab=20.57 E-value=1.9e+02 Score=30.37 Aligned_cols=61 Identities=15% Similarity=0.167 Sum_probs=46.5
Q ss_pred CCHHH-HHHHHHHHHHcCCCeEEEccccccCchhHHHHHHHHHHHhccCCCCcccccCCCCCHHHHH
Q psy7978 367 YTPAE-WEIIRKAAKQAGAHDAVVCENWAKGGAGAADLADAVIKATELKDKQFKYLYDIHDPLLTKI 432 (542)
Q Consensus 367 DT~~E-i~~i~~~~~~~G~~~~~v~~~~a~GG~Ga~~LA~~Vv~a~~~~~~~f~~lY~~~~~l~eKI 432 (542)
=|++| .+.|+++.++.|+..+.+...+ -+.-..+|+.|+-...+.. -|+.=|+ ..+|+|++
T Consensus 367 GTpe~Vad~L~~~~~~~g~D~f~l~~~~---~~~le~fa~~VvP~L~~rg-~~r~~y~-~~tlR~~l 428 (454)
T 1tvl_A 367 GTPERVASLIETWFNAEAADGFIVGSDI---PGTLDAFVEKVIPILQERG-LYRQDYR-GGTLRENL 428 (454)
T ss_dssp ECHHHHHHHHHHHHHTTSCSEEEECCCS---TTHHHHHHHHHHHHHHHTT-SSCSSCS-CSSHHHHH
T ss_pred ECHHHHHHHHHHHHHhcCCCEEEEcCCC---hHHHHHHHHHHHHHHhhcC-CcCCCCC-CcCHHHHc
Confidence 46777 4568888888889767776554 4567789999999987644 5898997 56999998
No 177
>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A*
Probab=20.47 E-value=2.2e+02 Score=27.69 Aligned_cols=58 Identities=17% Similarity=0.185 Sum_probs=38.0
Q ss_pred CCCCcE-EEeCCCCC-CHHH-HHHHHHHHHHcCC-CeEEEccccccCchhHHHHHHHHHHHhcc
Q psy7978 354 LEHPPV-TMLIYYTY-TPAE-WEIIRKAAKQAGA-HDAVVCENWAKGGAGAADLADAVIKATEL 413 (542)
Q Consensus 354 fGvpvV-AiN~F~tD-T~~E-i~~i~~~~~~~G~-~~~~v~~~~a~GG~Ga~~LA~~Vv~a~~~ 413 (542)
+++|++ ++|+.... ..++ .+.+.++.+..+. ..+..+ =+.-|+|-.+|-+.+.+.+..
T Consensus 121 ~~~pvilV~NK~Dl~~~~~~~~~~~~~l~~~~~~~~~i~~v--SA~~g~gv~~L~~~l~~~l~~ 182 (308)
T 3iev_A 121 LNKPVIVVINKIDKIGPAKNVLPLIDEIHKKHPELTEIVPI--SALKGANLDELVKTILKYLPE 182 (308)
T ss_dssp GCCCEEEEEECGGGSSSGGGGHHHHHHHHHHCTTCCCEEEC--BTTTTBSHHHHHHHHHHHSCB
T ss_pred cCCCEEEEEECccCCCCHHHHHHHHHHHHHhccCCCeEEEE--eCCCCCCHHHHHHHHHHhCcc
Confidence 579999 99997542 3333 3445556666652 123333 356789999999999988754
No 178
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=20.40 E-value=62 Score=29.45 Aligned_cols=21 Identities=19% Similarity=0.322 Sum_probs=17.0
Q ss_pred cCCCCHHHHHHHcCCCccccc
Q psy7978 148 QDPKDINQLAQEIGLHVSEVS 168 (542)
Q Consensus 148 ~~~~~I~~ia~~lgl~~~~l~ 168 (542)
..+.++++||+++|+++..++
T Consensus 42 ~~~~s~~eIA~~~~i~~~~l~ 62 (159)
T 3lwf_A 42 DGPISLRSIAQDKNLSEHYLE 62 (159)
T ss_dssp SCCBCHHHHHHHHTCCHHHHH
T ss_pred CCCcCHHHHHHHHCcCHHHHH
Confidence 346789999999999986554
Done!