BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7979
(186 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BTQ0|PCGF3_MOUSE Polycomb group RING finger protein 3 OS=Mus musculus GN=PcgF3 PE=2
SV=1
Length = 241
Score = 204 bits (518), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 133/197 (67%), Gaps = 27/197 (13%)
Query: 12 NTCPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLL 71
NTCP+C I+IHQSHPLQYI DRTMQD+VYKLVP LQ EM+++REFY G+ P D+
Sbjct: 50 NTCPTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFYHKLGMEVPGDIK 109
Query: 72 LE----------------------DEEEENTDQVNSDYHRLDEQVNVYLECSVATTSSLK 109
E E E + ++DYHR DEQV++ LEC+ +S L+
Sbjct: 110 GEACSAKQHLDPRNGETKADDNSNKETAEEKQEEDNDYHRSDEQVSICLECN---SSKLR 166
Query: 110 TLKKRFIRLSSQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRWR 169
LK+++IR S+QAT+ HLKKF+A KL S + E+DILCN+E+LGKDHTLKFV +TRWR
Sbjct: 167 GLKRKWIRCSAQATVLHLKKFIAKKL--NLSSFNELDILCNEEILGKDHTLKFVVVTRWR 224
Query: 170 FRTPPLKLQYRPRIDIL 186
F+ PL L YRP++D+L
Sbjct: 225 FKKAPLLLHYRPKMDLL 241
>sp|Q2KJ29|PCGF3_BOVIN Polycomb group RING finger protein 3 OS=Bos taurus GN=PCGF3 PE=2
SV=1
Length = 242
Score = 202 bits (515), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 133/198 (67%), Gaps = 28/198 (14%)
Query: 12 NTCPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLL 71
NTCP+C I+IHQSHPLQYI DRTMQD+VYKLVP LQ EM+++REFY GL P D+
Sbjct: 50 NTCPTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFYHKLGLEVPGDIK 109
Query: 72 LE------------DEEEENTDQVN-----------SDYHRLDEQVNVYLECSVATTSSL 108
E + E + D N DYHR DEQV++ LEC+ +S L
Sbjct: 110 GETCSAKQHLDPHRNGETKADDSSNKEAAEEKQEEDGDYHRSDEQVSICLECN---SSKL 166
Query: 109 KTLKKRFIRLSSQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRW 168
+ LK+++IR S+QAT+ HLKKF+A KL S + E+DILCN+E+LGKDHTLKFV +TRW
Sbjct: 167 RGLKRKWIRCSAQATVLHLKKFIAKKL--NLSSFNELDILCNEEILGKDHTLKFVVVTRW 224
Query: 169 RFRTPPLKLQYRPRIDIL 186
RF+ PL L YRP++D+L
Sbjct: 225 RFKKAPLLLHYRPKMDLL 242
>sp|Q3KNV8|PCGF3_HUMAN Polycomb group RING finger protein 3 OS=Homo sapiens GN=PCGF3 PE=1
SV=1
Length = 242
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 134/198 (67%), Gaps = 28/198 (14%)
Query: 12 NTCPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLL 71
NTCP+C I+IHQSHPLQYI DRTMQD+VYKLVP LQ EM+++REFY G+ P D+
Sbjct: 50 NTCPTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFYHKLGMEVPGDIK 109
Query: 72 LE------------DEEEENTDQVN-----------SDYHRLDEQVNVYLECSVATTSSL 108
E + E + D N +DYHR DEQV++ LEC+ +S L
Sbjct: 110 GETCSAKQHLDSHRNGETKADDSSNKEAAEEKPEEDNDYHRSDEQVSICLECN---SSKL 166
Query: 109 KTLKKRFIRLSSQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRW 168
+ LK+++IR S+QAT+ HLKKF+A KL S + E+DILCN+E+LGKDHTLKFV +TRW
Sbjct: 167 RGLKRKWIRCSAQATVLHLKKFIAKKL--NLSSFNELDILCNEEILGKDHTLKFVVVTRW 224
Query: 169 RFRTPPLKLQYRPRIDIL 186
RF+ PL L YRP++D+L
Sbjct: 225 RFKKAPLLLHYRPKMDLL 242
>sp|Q07G17|PCGF3_XENTR Polycomb group RING finger protein 3 OS=Xenopus tropicalis GN=pcgf3
PE=2 SV=1
Length = 242
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 133/198 (67%), Gaps = 28/198 (14%)
Query: 12 NTCPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLL 71
NTCP+C I+IHQSHPLQYI DRTMQD+VYKLVP LQ EM+++REFY G+ P D+
Sbjct: 50 NTCPTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFYHKLGMEVPGDIK 109
Query: 72 LE-----------DEEEENTDQ------------VNSDYHRLDEQVNVYLECSVATTSSL 108
E E TD+ + DYHR DEQV++ LEC+ +S L
Sbjct: 110 AEILTVKQHVEAHRNGETKTDEHTHKEPPEEKQEEDHDYHRSDEQVSICLECN---SSKL 166
Query: 109 KTLKKRFIRLSSQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRW 168
+ LK+++IR S+QAT+ HLKKF+A KL S + E+DILCN+E+LGKDHTLKFV +TRW
Sbjct: 167 RGLKRKWIRCSAQATVLHLKKFIAKKL--NLSSFNELDILCNEEILGKDHTLKFVVVTRW 224
Query: 169 RFRTPPLKLQYRPRIDIL 186
RF+ PL L YRP++D+L
Sbjct: 225 RFKKAPLLLHYRPKMDLL 242
>sp|B3DK16|PCF5A_DANRE Polycomb group RING finger protein 5-A OS=Danio rerio GN=pcgf5a
PE=2 SV=1
Length = 234
Score = 129 bits (325), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 113/189 (59%), Gaps = 21/189 (11%)
Query: 12 NTCPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLL 71
N CP C I +H+++PL+ + D+T++++++KLVP L+ E +E EF+R +
Sbjct: 51 NECPECGIQVHETNPLEMLRLDKTLEEIIFKLVPGLREKEEHQESEFWRKHKIKSNG--- 107
Query: 72 LEDEEEENTDQVN--------SDYHRLDEQVNVYLEC----SVATTSSLKTLKKRFIRLS 119
ED +++ DYHR D Q+ + L+C + S +K L K+FIR S
Sbjct: 108 -EDGPRAKKSRLSGEDDDGNGGDYHRSDPQIAICLDCLRNNGQSGESIVKGLMKKFIRCS 166
Query: 120 SQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRWRFRTP---PLK 176
++ T+ +KKF+ +K L S Y E+D+LCN E++GKDHTL+F+Y TRWR + P+
Sbjct: 167 TRVTVGTIKKFLCVK-LKLPSSY-ELDVLCNGEIMGKDHTLEFIYRTRWRLQGDSAYPMV 224
Query: 177 LQYRPRIDI 185
L+YRPRID
Sbjct: 225 LEYRPRIDF 233
>sp|Q3UK78|PCGF5_MOUSE Polycomb group RING finger protein 5 OS=Mus musculus GN=Pcgf5 PE=2
SV=1
Length = 256
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 120/210 (57%), Gaps = 41/210 (19%)
Query: 12 NTCPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLL 71
N CP C +H+++PL+ + D T++++++KLVP L+ E++RE EF++ P++
Sbjct: 51 NDCPRCGNQVHETNPLEMLRLDNTLEEIIFKLVPGLREQELQRELEFWKKNK---PQENG 107
Query: 72 LED---------EEEENTDQVNSDYHRLDEQVNVYLEC----SVATTSSLKTLKKRFIRL 118
+D +EE + +Q + DYHR D Q+ + L+C + + +K L K+FIR
Sbjct: 108 QDDISKVDKSKADEEGDENQDDKDYHRSDPQIAICLDCLRNNGQSGDNVVKGLMKKFIRC 167
Query: 119 SSQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRWRFRTP----- 173
S++ T+ +KKF++LKL S E+D+LCN E++GKDHT++F+Y+TRWR R
Sbjct: 168 STRVTVGTIKKFLSLKLKLPSS--YELDVLCNGEIMGKDHTMEFIYMTRWRLRGENLCCL 225
Query: 174 ------------------PLKLQYRPRIDI 185
P+ LQYRPRID
Sbjct: 226 NCSASQVCSQDGTLYQSYPMVLQYRPRIDF 255
>sp|Q1JPS1|PCF5B_DANRE Polycomb group RING finger protein 5-B OS=Danio rerio GN=pcgf5b
PE=2 SV=1
Length = 232
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 119/187 (63%), Gaps = 19/187 (10%)
Query: 12 NTCPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIR------GLP 65
N CP C I +H+++PL+ + D T++++++KLVP L+ E ++E EF+R + G
Sbjct: 51 NDCPKCGIQVHETNPLEMLRLDNTLEEVIFKLVPGLREKEQQQEDEFWRRKESNDENGPM 110
Query: 66 CPKDLLLEDEEEENTDQVNSDYHRLDEQVNVYLEC----SVATTSSLKTLKKRFIRLSSQ 121
C K + +EE+ D+ + DYHR D Q+ + L+C + +K L K+FIR S++
Sbjct: 111 CKKRRV----DEEDDDKGDGDYHRSDPQIAICLDCLRINGQMGENIVKGLMKKFIRCSTR 166
Query: 122 ATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRWRFRTP---PLKLQ 178
T+ +KKF++LKL S E+D+LCN E++GKDHT++F+Y+TRWR R P+ L+
Sbjct: 167 VTVGTIKKFLSLKLKLPSS--YELDVLCNGEIMGKDHTMEFIYMTRWRLRGENVYPMVLE 224
Query: 179 YRPRIDI 185
YRPRID
Sbjct: 225 YRPRIDF 231
>sp|A0JN86|PCGF5_BOVIN Polycomb group RING finger protein 5 OS=Bos taurus GN=PCGF5 PE=2
SV=1
Length = 255
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 120/210 (57%), Gaps = 42/210 (20%)
Query: 12 NTCPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLL 71
N CP C +H+++PL+ + D T++++++KLVP L+ +++RE EF++ P++
Sbjct: 51 NDCPRCGNQVHETNPLEMLRLDNTLEEIIFKLVPGLRE-QLERESEFWKKNK---PQENG 106
Query: 72 LED---------EEEENTDQVNSDYHRLDEQVNVYLEC----SVATTSSLKTLKKRFIRL 118
+D +EE + +Q + DYHR D Q+ + L+C + + +K L K+FIR
Sbjct: 107 QDDMSKVDKPKVDEEGDENQDDKDYHRSDPQIAICLDCLRNNGQSGDNVVKGLMKKFIRC 166
Query: 119 SSQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRWRFRTP----- 173
S++ T+ +KKF++LKL S E+D+LCN E++GKDHT++F+Y+TRWR R
Sbjct: 167 STRVTVGTIKKFLSLKLKLPSSY--ELDVLCNGEIMGKDHTMEFIYMTRWRLRGENFRCL 224
Query: 174 ------------------PLKLQYRPRIDI 185
P+ LQYRPRID
Sbjct: 225 NCSASQVCSQDGPLYQSYPMVLQYRPRIDF 254
>sp|Q86SE9|PCGF5_HUMAN Polycomb group RING finger protein 5 OS=Homo sapiens GN=PCGF5 PE=1
SV=1
Length = 256
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 119/210 (56%), Gaps = 41/210 (19%)
Query: 12 NTCPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLL 71
N CP C +H+++PL+ + D T++++++KLVP L+ E++RE EF++ P++
Sbjct: 51 NDCPRCGNQVHETNPLEMLRLDNTLEEIIFKLVPGLREQELERESEFWKKNK---PQENG 107
Query: 72 LEDEEEENTDQV---------NSDYHRLDEQVNVYLEC----SVATTSSLKTLKKRFIRL 118
+D + + +V + DYHR D Q+ + L+C + + +K L K+FIR
Sbjct: 108 QDDTSKADKPKVDEEGDENEDDKDYHRSDPQIAICLDCLRNNGQSGDNVVKGLMKKFIRC 167
Query: 119 SSQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRWRFR------- 171
S++ T+ +KKF++LKL S E+D+LCN E++GKDHT++F+Y+TRWR R
Sbjct: 168 STRVTVGTIKKFLSLKLKLPSS--YELDVLCNGEIMGKDHTMEFIYMTRWRLRGENFRCL 225
Query: 172 ----------------TPPLKLQYRPRIDI 185
+ P+ LQYRPRID
Sbjct: 226 NCSASQVCSQDGPLYQSYPMVLQYRPRIDF 255
>sp|Q9BSM1|PCGF1_HUMAN Polycomb group RING finger protein 1 OS=Homo sapiens GN=PCGF1 PE=1
SV=2
Length = 259
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 101/178 (56%), Gaps = 19/178 (10%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP CNI IH++ PL + DR MQD+VYKLVP LQ +E KR REFY+ RGL D + +
Sbjct: 82 CPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIREFYQSRGL----DRVTQ 137
Query: 74 DEEEE-----------NTDQVNSDYHRLDEQVNVYLE-CSVATTSSLKTLKKRFIRLSSQ 121
EE + D + Y+R DEQ+N+ LE S + L+ +++R S +
Sbjct: 138 PTGEEPALSNLGLPFSSFDHSKAHYYRYDEQLNLCLERLSSGKDKNKSVLQNKYVRCSVR 197
Query: 122 ATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRWRFRTPPLKLQY 179
A + HL++ + +L+ + + +L ++E+L T+K ++++RW + PL LQY
Sbjct: 198 AEVRHLRRVLCHRLMLNP---QHVQLLFDNEVLPDHMTMKQIWLSRWFGKPSPLLLQY 252
>sp|Q7ZYZ7|PCGF1_DANRE Polycomb group RING finger protein 1 OS=Danio rerio GN=pcgf1 PE=3
SV=1
Length = 261
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 101/177 (57%), Gaps = 14/177 (7%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP CNI IH++ PL + DR MQD+VYKLVP LQ +E KR +EFY+ RGL E
Sbjct: 80 CPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQESEDKRIKEFYQSRGLERIIQPSGE 139
Query: 74 DEEEENT-------DQVNSDYHRLDEQVNVYLECSVATTSSLK----TLKKRFIRLSSQA 122
+ +NT D + ++R DEQV++ LE ++ S TL+++F+R S +A
Sbjct: 140 ESVPDNTGLPYTSFDHSKAHFYRYDEQVSLCLERQSSSFSGKDKNKLTLQQKFVRCSVRA 199
Query: 123 TITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRWRFRTPPLKLQY 179
+ HL+K + +L EK ++ +L N+E L T+K ++++ W + PL L Y
Sbjct: 200 EVRHLRKVLCHRLNVEKH---QVQMLFNNESLPDHMTMKRLWLSHWFGKAQPLVLHY 253
>sp|Q8R023|PCGF1_MOUSE Polycomb group RING finger protein 1 OS=Mus musculus GN=Pcgf1 PE=2
SV=2
Length = 259
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 101/178 (56%), Gaps = 19/178 (10%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP CNI IH++ PL + DR MQD+VYKLVP LQ +E KR REFY+ RGL D + +
Sbjct: 82 CPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIREFYQSRGL----DRVSQ 137
Query: 74 DEEEE-----------NTDQVNSDYHRLDEQVNVYLE-CSVATTSSLKTLKKRFIRLSSQ 121
EE + D + Y+R DEQ+++ LE S + L+ +++R S +
Sbjct: 138 PSGEEPALSNLGLPFSSFDHSKAHYYRYDEQLSLCLERLSSGKDKNKNVLQNKYVRCSVR 197
Query: 122 ATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRWRFRTPPLKLQY 179
A + HL++ + +L+ + + +L ++E+L T+K ++++RW + PL LQY
Sbjct: 198 AEVRHLRRVLCHRLMLNP---QHVQLLFDNEVLPDHMTMKQLWLSRWFGKPSPLLLQY 252
>sp|Q2YDF9|PCGF1_BOVIN Polycomb group RING finger protein 1 OS=Bos taurus GN=PCGF1 PE=2
SV=2
Length = 259
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 99/178 (55%), Gaps = 19/178 (10%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP CNI IH++ PL DR MQD+VYKLVP LQ +E KR REFY+ RGL D + +
Sbjct: 82 CPMCNIKIHETQPLLNHKLDRVMQDIVYKLVPGLQDSEEKRIREFYQSRGL----DRVTQ 137
Query: 74 DEEEE-----------NTDQVNSDYHRLDEQVNVYLE-CSVATTSSLKTLKKRFIRLSSQ 121
EE + D + Y+R DEQ+++ LE S + L+ +++R S +
Sbjct: 138 PSGEEPALSNLGLPFSSFDHSKAHYYRYDEQLSLCLERLSSGKDKNKSILQNKYVRCSVR 197
Query: 122 ATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRWRFRTPPLKLQY 179
A + HL++ + +L+ + + +L ++E+L T+K ++++ W + PL LQY
Sbjct: 198 AEVRHLRRVLCHRLMLNP---QHVQLLFDNEVLPDHMTMKQIWLSHWFGKPSPLLLQY 252
>sp|Q5XI70|PCGF6_RAT Polycomb group RING finger protein 6 OS=Rattus norvegicus GN=Pcgf6
PE=2 SV=1
Length = 351
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 90/157 (57%), Gaps = 10/157 (6%)
Query: 12 NTCPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLL 71
N CP CNI++HQ+ PL I DR +QD+VYKLV NL+ E K+ +FY+ RGL PK +
Sbjct: 168 NRCPKCNIVVHQTQPLYNIRLDRQLQDIVYKLVVNLEEREKKQMHDFYKERGLEVPKPAV 227
Query: 72 LE--DEEEENTDQVNSDYHRLDEQVNVYLECSVAT----TSSLKTLKKRFIRLSSQATIT 125
+ + T + R+ +++V L T K L+K+F+R+S +ATI
Sbjct: 228 PQPVPASKGRTKKALESVFRIPPELDVSLLLEFIGANEDTGHFKPLEKKFVRVSGEATIG 287
Query: 126 HLKKFVALKL-LDEKSKYKEIDILCNDELLGKDHTLK 161
H++KF+ K+ LD ++DI+C D LL + TL+
Sbjct: 288 HVEKFLRRKMGLDPAC---QVDIICGDHLLERYQTLR 321
>sp|Q99NA9|PCGF6_MOUSE Polycomb group RING finger protein 6 OS=Mus musculus GN=Pcgf6 PE=1
SV=1
Length = 353
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 90/157 (57%), Gaps = 10/157 (6%)
Query: 12 NTCPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLL 71
N CP CNI++HQ+ PL I DR +QD+VYKLV NL+ E K+ +FY+ RGL PK
Sbjct: 170 NRCPKCNIVVHQTQPLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKERGLEVPKPAA 229
Query: 72 LE--DEEEENTDQVNSDYHRLDEQVNVYLECSVAT----TSSLKTLKKRFIRLSSQATIT 125
+ + T +V R+ ++++ L T K L+K+F+R+S +ATI
Sbjct: 230 PQPVPSSKGKTKKVLESVFRIPPELDMSLLLEFIGANEDTGHFKPLEKKFVRVSGEATIG 289
Query: 126 HLKKFVALKL-LDEKSKYKEIDILCNDELLGKDHTLK 161
H++KF+ K+ LD ++DI+C D LL + TL+
Sbjct: 290 HVEKFLRRKMGLDPAC---QVDIICGDHLLERYQTLR 323
>sp|Q9BYE7|PCGF6_HUMAN Polycomb group RING finger protein 6 OS=Homo sapiens GN=PCGF6 PE=1
SV=2
Length = 350
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 92/157 (58%), Gaps = 10/157 (6%)
Query: 12 NTCPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLL 71
N CP CNI++HQ+ PL I DR +QD+VYKLV NL+ E K+ +FY+ RGL PK +
Sbjct: 167 NRCPKCNIVVHQTQPLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKERGLEVPKPAV 226
Query: 72 LE--DEEEENTDQVNSDYHRLDEQVNVYLE----CSVATTSSLKTLKKRFIRLSSQATIT 125
+ + + +V R+ ++++ L + T K L+K+F+R+S +ATI
Sbjct: 227 PQPVPSSKGRSKKVLESVFRIPPELDMSLLLEFIGANEGTGHFKPLEKKFVRVSGEATIG 286
Query: 126 HLKKFVALKL-LDEKSKYKEIDILCNDELLGKDHTLK 161
H++KF+ K+ LD ++DI+C D LL + TL+
Sbjct: 287 HVEKFLRRKMGLDPAC---QVDIICGDHLLEQYQTLR 320
>sp|Q6DLV9|PCGF1_RAT Polycomb group RING finger protein 1 (Fragment) OS=Rattus
norvegicus GN=Pcgf1 PE=2 SV=1
Length = 243
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 99/174 (56%), Gaps = 15/174 (8%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP CNI IH++ PL + DR MQD+VYKLVP LQ +E KR R+FY+ RGL D + +
Sbjct: 70 CPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIRDFYQSRGL----DRVSQ 125
Query: 74 DEEEENTDQVNS-------DYHRLDEQVNVYLE-CSVATTSSLKTLKKRFIRLSSQATIT 125
EE + Y+R DEQ+++ LE S + L+ +++R S +A +
Sbjct: 126 PSGEEPALRGLGLPFTSFDHYYRYDEQLSLCLERLSSGKDKNKNVLQNKYVRCSVRAEVR 185
Query: 126 HLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRWRFRTPPLKLQY 179
HL++ + +L+ + + +L ++E+L T+K ++++RW + PL LQY
Sbjct: 186 HLRRVLCHRLMLNP---QHVQLLFDNEVLPDHMTMKQLWLSRWFGKPSPLLLQY 236
>sp|Q28H21|PCGF1_XENTR Polycomb group RING finger protein 1 OS=Xenopus tropicalis GN=pcgf1
PE=2 SV=1
Length = 259
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 99/180 (55%), Gaps = 15/180 (8%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGL-----PCPK 68
CP CNI IH++ PL + DR MQD+VYKLVP LQ NE R R+FY RGL P
Sbjct: 80 CPLCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQENEDGRIRDFYHSRGLERVLQPSAV 139
Query: 69 DLLLEDEEEEN----TDQVNSDYHRLDEQVNVYLECSVATTSSLK--TLKKRFIRLSSQA 122
+ + D + + Q S Y+R DE V + LE V++ K L+++++R S ++
Sbjct: 140 EDSVGDVSQLSLSLAVSQKTSHYYRNDEHVCLCLE-KVSSGKDKKKFILEQKYVRCSVRS 198
Query: 123 TITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRWRFRTPPLKLQYRPR 182
I HL++ ++ +L + + +L ++++L T+K +++T W + PL L Y R
Sbjct: 199 EIRHLRRVLSHRL---SAPLAHVQLLIDNKVLPDHMTMKQLWLTHWYGKPAPLVLLYSVR 255
>sp|Q4QR06|PCGF1_XENLA Polycomb group RING finger protein 1 OS=Xenopus laevis GN=pcgf1
PE=2 SV=2
Length = 259
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 98/177 (55%), Gaps = 15/177 (8%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGL-----PCPK 68
CP CNI IH++ PL + DR MQD+VYKLVP LQ NE R R+FY RGL P
Sbjct: 80 CPLCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQENEDSRIRDFYHSRGLERVLQPSAV 139
Query: 69 DLLLEDEEEEN----TDQVNSDYHRLDEQVNVYLECSVATTSSLK--TLKKRFIRLSSQA 122
+ + D + + Q S Y+R DE V + LE V++ K L+++++R S ++
Sbjct: 140 EDSVGDVSQLSLSLAVSQKTSHYYRNDEHVCLCLE-KVSSGKDKKKFILQQKYVRCSVRS 198
Query: 123 TITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTLKFVYITRWRFRTPPLKLQY 179
I HL++ ++ +L + ++ +L ++++L T+K +++ W + PL L Y
Sbjct: 199 EIRHLRRVLSHRL---SAPLAQVQLLIDNKVLPDHMTMKQLWLMHWYGKPAPLVLLY 252
>sp|Q5R8L2|BMI1_PONAB Polycomb complex protein BMI-1 OS=Pongo abelii GN=BMI1 PE=2 SV=1
Length = 326
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 96/184 (52%), Gaps = 23/184 (12%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP C++ +H++ PL I D+T+QD+VYKLVP L NEMKR R+FY + E
Sbjct: 53 CPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNE 112
Query: 74 DEEEE--------NTDQVNS------DYHRLDEQVNVYLECSVATTSSLKTLKKRFIRLS 119
D E D++ S D +RLD +VN E S + KR++R
Sbjct: 113 DRGEVADEDKRIITDDEIISLSIEFFDQNRLDRKVNKDKE-----KSKEEVNDKRYLRCP 167
Query: 120 SQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTL-KFVYITRWRFRTPPLKLQ 178
+ T+ HL+KF+ K +D + + +ID++ +E L +TL YI WR R PL L+
Sbjct: 168 AAMTVMHLRKFLRSK-MDIPNTF-QIDVMYEEEPLKDYYTLMDIAYIYTWR-RNGPLPLK 224
Query: 179 YRPR 182
YR R
Sbjct: 225 YRVR 228
>sp|P35226|BMI1_HUMAN Polycomb complex protein BMI-1 OS=Homo sapiens GN=BMI1 PE=1 SV=2
Length = 326
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 96/184 (52%), Gaps = 23/184 (12%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP C++ +H++ PL I D+T+QD+VYKLVP L NEMKR R+FY + E
Sbjct: 53 CPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNE 112
Query: 74 DEEEE--------NTDQVNS------DYHRLDEQVNVYLECSVATTSSLKTLKKRFIRLS 119
D E D++ S D +RLD +VN E S + KR++R
Sbjct: 113 DRGEVADEDKRIITDDEIISLSIEFFDQNRLDRKVNKDKE-----KSKEEVNDKRYLRCP 167
Query: 120 SQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTL-KFVYITRWRFRTPPLKLQ 178
+ T+ HL+KF+ K +D + + +ID++ +E L +TL YI WR R PL L+
Sbjct: 168 AAMTVMHLRKFLRSK-MDIPNTF-QIDVMYEEEPLKDYYTLMDIAYIYTWR-RNGPLPLK 224
Query: 179 YRPR 182
YR R
Sbjct: 225 YRVR 228
>sp|Q32KX7|BMI1_BOVIN Polycomb complex protein BMI-1 OS=Bos taurus GN=BMI1 PE=2 SV=1
Length = 326
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 96/184 (52%), Gaps = 23/184 (12%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP C++ +H++ PL I D+T+QD+VYKLVP L NEMKR R+FY + E
Sbjct: 53 CPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNE 112
Query: 74 DEEEE--------NTDQVNS------DYHRLDEQVNVYLECSVATTSSLKTLKKRFIRLS 119
D E D++ S D +RLD ++N E S + KR++R
Sbjct: 113 DRGEVADEDKRIITDDEIISLSIEFFDQNRLDRKINKDKE-----KSKEEVNDKRYLRCP 167
Query: 120 SQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTL-KFVYITRWRFRTPPLKLQ 178
+ T+ HL+KF+ K +D + + +ID++ +E L +TL YI WR R PL L+
Sbjct: 168 AAMTVMHLRKFLRSK-MDIPNTF-QIDVMYEEEPLKDYYTLMDIAYIYTWR-RNGPLPLK 224
Query: 179 YRPR 182
YR R
Sbjct: 225 YRVR 228
>sp|Q9TST0|BMI1_FELCA Polycomb complex protein BMI-1 OS=Felis catus GN=BMI1 PE=2 SV=1
Length = 326
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 95/184 (51%), Gaps = 23/184 (12%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP C++ +H++ PL I D+T+QD+VYKLVP L NEMKR R+FY + E
Sbjct: 53 CPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNE 112
Query: 74 DEEEE--------NTDQVNS------DYHRLDEQVNVYLECSVATTSSLKTLKKRFIRLS 119
D E D++ S D +RLD +VN E + KR++R
Sbjct: 113 DRGEVADEDKRIITDDEIISLSIEFFDQNRLDRKVNKDKE-----KPKEEVNDKRYLRCP 167
Query: 120 SQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTL-KFVYITRWRFRTPPLKLQ 178
+ T+ HL+KF+ K +D + + +ID++ +E L +TL YI WR R PL L+
Sbjct: 168 AAMTVMHLRKFLRSK-MDIPNTF-QIDVMYEEEPLKDYYTLMDIAYIYTWR-RNGPLPLK 224
Query: 179 YRPR 182
YR R
Sbjct: 225 YRVR 228
>sp|Q640D5|BMI1B_XENLA Polycomb complex protein BMI-1-B OS=Xenopus laevis GN=bmi1b PE=2
SV=1
Length = 323
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 23/184 (12%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP C++ +H++ PL I D+T+QD+VYKLVP L EMKR R+FY +
Sbjct: 53 CPICDVQVHKTRPLLNIRADKTLQDIVYKLVPGLFKGEMKRRRDFYAAH-----PSVDAA 107
Query: 74 DEEEENTDQVNSDYHRL---DEQVNVYLECSVATTSSLKTLK-----------KRFIRLS 119
+ E+ +V + R+ DE +++ +E ++ K K KR++R
Sbjct: 108 NGSNEDRGEVADEDKRIITDDEIISLSIEFFDQNRANRKGSKDKEKSKDEANDKRYLRCP 167
Query: 120 SQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTL-KFVYITRWRFRTPPLKLQ 178
+ TI HL+KF+ K +D S + +ID++ +E L +TL YI WR R PL L+
Sbjct: 168 AALTIMHLRKFLRSK-MDIPSNF-QIDVMYEEEPLKDYYTLMDIAYIYTWR-RNGPLPLK 224
Query: 179 YRPR 182
YR R
Sbjct: 225 YRVR 228
>sp|P23798|PCGF2_MOUSE Polycomb group RING finger protein 2 OS=Mus musculus GN=Pcgf2 PE=1
SV=2
Length = 342
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 95/183 (51%), Gaps = 23/183 (12%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP C++ +H++ PL I D+T+QD+VYKLVP L +EMKR R+FY P +
Sbjct: 53 CPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAY----PLTEVPN 108
Query: 74 DEEEENTDQVNSDYHRL--DEQVNVYLEC--SVATTSSLKTLKK-----------RFIRL 118
E+ + + + L DE V++ +E V K L + RF+R
Sbjct: 109 GSNEDRGEVLEQEKGALGDDEIVSLSIEFYEGVRDREEKKNLTENGDGDKEKTGVRFLRC 168
Query: 119 SSQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTL-KFVYITRWRFRTPPLKL 177
+ T+ HL KF+ K +D SKYK ++IL DE L + +TL YI WR R PL L
Sbjct: 169 PAAMTVMHLAKFLRNK-MDVPSKYK-VEILYEDEPLKEYYTLMDIAYIYPWR-RNGPLPL 225
Query: 178 QYR 180
+YR
Sbjct: 226 KYR 228
>sp|P25916|BMI1_MOUSE Polycomb complex protein BMI-1 OS=Mus musculus GN=Bmi1 PE=1 SV=1
Length = 324
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 93/184 (50%), Gaps = 25/184 (13%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP C++ +H++ PL I D+T+QD+VYKLVP L NEMKR R+FY + E
Sbjct: 53 CPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNE 112
Query: 74 DEEEE--------NTDQVNS------DYHRLDEQVNVYLECSVATTSSLKTLKKRFIRLS 119
D E D++ S D RLD +VN + KR++R
Sbjct: 113 DRGEVADEEKRIITDDEIISLSIEFFDQSRLDRKVN-------KEKPKEEVNDKRYLRCP 165
Query: 120 SQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTL-KFVYITRWRFRTPPLKLQ 178
+ T+ HL+KF+ K +D + + +ID++ +E L +TL YI WR R PL L+
Sbjct: 166 AAMTVMHLRKFLRSK-MDIPNTF-QIDVMYEEEPLKDYYTLMDIAYIYTWR-RNGPLPLK 222
Query: 179 YRPR 182
YR R
Sbjct: 223 YRVR 226
>sp|Q91648|BMI1A_XENLA Polycomb complex protein BMI-1-A OS=Xenopus laevis GN=bmi1a PE=1
SV=1
Length = 326
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 94/185 (50%), Gaps = 23/185 (12%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP C++ +H++ PL I D+T+QD+VYKLVP L EMKR R+FY P +
Sbjct: 53 CPICDVQVHKTRPLLNIRADKTLQDIVYKLVPGLFKGEMKRRRDFYAAH----PSADVAN 108
Query: 74 DEEEENTDQVNSDYHRL--DEQVNVYLECSVATTSSLKTLK-------------KRFIRL 118
E+ + + D + DE +++ +E + K K KR++R
Sbjct: 109 GSNEDRGEVADEDKRIITDDEIISLSIEFFDQNKADRKGSKDKDKEKSKDEINDKRYLRC 168
Query: 119 SSQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTL-KFVYITRWRFRTPPLKL 177
+ TI HL+KF+ K +D S + +ID++ +E L +TL YI WR R PL L
Sbjct: 169 PAALTIMHLRKFLRSK-MDIPSNF-QIDVMYEEEALKDYYTLMDIAYIYTWR-RNGPLPL 225
Query: 178 QYRPR 182
+YR R
Sbjct: 226 KYRVR 230
>sp|P35227|PCGF2_HUMAN Polycomb group RING finger protein 2 OS=Homo sapiens GN=PCGF2 PE=1
SV=1
Length = 344
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 91/183 (49%), Gaps = 23/183 (12%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP C++ +H++ PL I D+T+QD+VYKLVP L +EMKR R+FY P +
Sbjct: 53 CPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAY----PLTEVPN 108
Query: 74 DEEEENTDQVNSDYHRLDEQVNVYLECSVATTSSLKTLKK---------------RFIRL 118
E+ + + + L + V L + + KK RF+R
Sbjct: 109 GSNEDRGEVLEQEKGALSDDEIVSLSIEFYEGARDRDEKKGPLENGDGDKEKTGVRFLRC 168
Query: 119 SSQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTL-KFVYITRWRFRTPPLKL 177
+ T+ HL KF+ K +D SKYK +++L DE L + +TL YI WR R PL L
Sbjct: 169 PAAMTVMHLAKFLRNK-MDVPSKYK-VEVLYEDEPLKEYYTLMDIAYIYPWR-RNGPLPL 225
Query: 178 QYR 180
+YR
Sbjct: 226 KYR 228
>sp|Q5SDR3|BMI1_CHICK Polycomb complex protein BMI-1 OS=Gallus gallus GN=BMI1 PE=2 SV=1
Length = 326
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 23/184 (12%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP C++ +H++ PL I D+T+QD+VYKLVP L NEMKR R+FY + E
Sbjct: 53 CPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNE 112
Query: 74 DEEEE--------NTDQVNS------DYHRLDEQVNVYLECSVATTSSLKTLKKRFIRLS 119
D E D++ S D +RL+ + N E S + KR++R
Sbjct: 113 DRGEVADEDKRIITDDEIISLSIEFFDQNRLERKGNKEKEKSKEEVN-----DKRYLRCP 167
Query: 120 SQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTL-KFVYITRWRFRTPPLKLQ 178
+ T+ HL+KF+ K +D + + +ID++ +E L +TL YI WR R PL L+
Sbjct: 168 AAMTVMHLRKFLRSK-MDIPNTF-QIDVMYEEEPLKDYYTLMDIAYIYTWR-RNGPLPLK 224
Query: 179 YRPR 182
YR R
Sbjct: 225 YRVR 228
>sp|Q7T3E6|BMI1B_DANRE Polycomb complex protein BMI-1-B OS=Danio rerio GN=bmi1b PE=2 SV=1
Length = 324
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 23/183 (12%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP C++ +H++ PL I D+T+QD+VYKLVP L NEMKR R+FY P D
Sbjct: 53 CPICDVQVHKTKPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAEH----PVDAT-- 106
Query: 74 DEEEENTDQVNSDYHRL---DEQVNVYLEC----------SVATTSSLKTLKKRFIRLSS 120
+ E+ +V+ + R+ DE +++ +E S+ + KR+++ +
Sbjct: 107 NGSNEDRGEVSDEDKRIIADDEIISLSIEFFDQKKLDGKDGEEKESTKEVTVKRYLQCPA 166
Query: 121 QATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTL-KFVYITRWRFRTPPLKLQY 179
T+ HL+KF+ K +D + +I+++ DE L +TL YI WR R PL L+Y
Sbjct: 167 AMTVMHLRKFLRSK-MDIPCTF-QIEVMYEDEPLKDYYTLMDIAYIYTWR-RNGPLPLKY 223
Query: 180 RPR 182
R R
Sbjct: 224 RVR 226
>sp|Q8JIR0|BMI1A_DANRE Polycomb complex protein BMI-1-A OS=Danio rerio GN=bmi1a PE=1 SV=2
Length = 320
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 21/182 (11%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP C++ +H++ PL I D+T+QD+VYKLVP L NEMKR R+FY +
Sbjct: 53 CPICDVQVHKTKPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAEH-----PSVDAA 107
Query: 74 DEEEENTDQVNSDYHRL---DEQVNVYLE---------CSVATTSSLKTLKKRFIRLSSQ 121
+ E+ +V + R+ DE +++ +E + KR+++ +
Sbjct: 108 NGSNEDRGEVADEDKRIITDDEIISLSIEFFDHRAQQQGCTEERQKEEVNNKRYLQCPAA 167
Query: 122 ATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTL-KFVYITRWRFRTPPLKLQYR 180
T+ HL+KF+ K +D Y +I+++ DE L +TL YI WR R PL L+YR
Sbjct: 168 MTVMHLRKFLRSK-MDIPPTY-QIEVMYEDEPLKDYYTLMDIAYIYTWR-RNGPLPLKYR 224
Query: 181 PR 182
R
Sbjct: 225 VR 226
>sp|P35820|PSC_DROME Polycomb group protein Psc OS=Drosophila melanogaster GN=Psc PE=1
SV=2
Length = 1601
Score = 67.4 bits (163), Expect = 5e-11, Method: Composition-based stats.
Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP C ++I+ + P I D T+Q +VYKLVP L E+ R+R FY+ R P++ L
Sbjct: 298 CPRCEMVINNAKP--NIKSDTTLQAIVYKLVPGLYERELMRKRAFYKDR----PEEAALA 351
Query: 74 DEEEENTDQVNSDYHRLDEQVNV--YLECSVATTSS----LKTLKKRFIRLSSQATITHL 127
E+ D + + D+ Y E T S + TL+ R+++ + ++HL
Sbjct: 352 TPEQRGDDTEHLIFSPSDDMSLSLEYAELGELKTDSEPELVDTLRPRYLQCPAMCRVSHL 411
Query: 128 KKFVALKLLDEKSKYKEIDILCNDE---LLGKDHTLKFVYITRWRFRTPPLKLQYR 180
KKFV K + ++ IDI+ + LL + YI W+ R P++ YR
Sbjct: 412 KKFVYDKFEIDAQRF-SIDIMYKVKTIVLLDYYTLMDIAYIYTWK-RDAPMRFYYR 465
>sp|O06457|PURK_SULSO N5-carboxyaminoimidazole ribonucleotide synthase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=purK PE=3 SV=1
Length = 365
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 42 KLVPNLQANEMKRERE----FYRIRGLPCPKDLLLEDEEE 77
KL+P L + E+KRER FYR LP P+ + ED EE
Sbjct: 88 KLLPRLNSVELKRERYKEKLFYRQHNLPTPRFYVAEDGEE 127
>sp|P25172|SUZ2_DROME Protein suppressor 2 of zeste OS=Drosophila melanogaster GN=Su(z)2
PE=2 SV=2
Length = 1368
Score = 33.9 bits (76), Expect = 0.56, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 18/172 (10%)
Query: 14 CPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLE 73
CP C + + D T++ L+YKLVP L E K +F DL+
Sbjct: 70 CPECKASGGKEINELNLKSDDTLRSLIYKLVPGLYQRECKELADFKE------QHDLV-- 121
Query: 74 DEEEENTDQVNSDYHRLDEQVNVYLECSVATTSSL---KTLKKRFIRLSSQATITHLKKF 130
+E+ TD+ ++ E +++ LE A + +++ ++ + LK+F
Sbjct: 122 --DEQTTDE--PEFFTTTELISLSLEYHPAMLHQCGPGEVPPTIYLQCAAGLPVELLKRF 177
Query: 131 VALKL-LDEKSKYKEIDILCNDELLGKDHTLKFV-YITRWRFRTPPLKLQYR 180
+ K ++ + E+++ DE+L + TL V Y W R P+ YR
Sbjct: 178 LCSKYNIETDNGLVEVEVTYKDEVLPTNFTLMDVAYCYNWS-RESPMAFCYR 228
>sp|Q65CZ5|HTPG_BACLD Chaperone protein HtpG OS=Bacillus licheniformis (strain DSM 13 /
ATCC 14580) GN=htpG PE=3 SV=1
Length = 626
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 15 PSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMKREREFYRIRGLPCPKDLLLED 74
P ++ + + + Y F + + K++ N Q E+EF + DL +E+
Sbjct: 448 PQTELVSEKGYEILY--FTEDIDEFAIKMLANYQ------EKEFKSV----SSGDLGIEN 495
Query: 75 EEEEN-TDQVNSDYHRLDEQVNVYLECSVATTSSLKTLKKRFIRLSSQATIT 125
++E+N +D +S Y L E++ L+ V + + K LK + L++ +T
Sbjct: 496 DDEQNQSDGDDSQYKDLFEEMKKTLDGKVKSVRASKRLKTHSVCLAADGEVT 547
>sp|Q56A24|KLH24_RAT Kelch-like protein 24 OS=Rattus norvegicus GN=Klhl24 PE=1 SV=1
Length = 600
Score = 32.0 bits (71), Expect = 2.6, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 103 ATTSSLKTL--KKRFIRLSSQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTL 160
A T SLKTL K + L + ++ ++F+ L K + ID +C+DEL+ +
Sbjct: 175 ADTHSLKTLFTKCKTFALQTFEDVSQHEEFLEL------DKDELIDYICSDELVIGKEEM 228
Query: 161 KFVYITRWRFRTPPLK 176
F + RW +R L+
Sbjct: 229 VFEAVMRWVYRAVDLR 244
>sp|Q8BRG6|KLH24_MOUSE Kelch-like protein 24 OS=Mus musculus GN=Klhl24 PE=2 SV=2
Length = 600
Score = 32.0 bits (71), Expect = 2.6, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 103 ATTSSLKTL--KKRFIRLSSQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTL 160
A T SLKTL K + L + ++ ++F+ L K + ID +C+DEL+ +
Sbjct: 175 ADTHSLKTLFTKCKTFALQTFEDVSQHEEFLEL------DKDELIDYICSDELVIGKEEM 228
Query: 161 KFVYITRWRFRTPPLK 176
F + RW +R L+
Sbjct: 229 VFEAVMRWVYRAVDLR 244
>sp|O66608|PURK_AQUAE N5-carboxyaminoimidazole ribonucleotide synthase OS=Aquifex
aeolicus (strain VF5) GN=purK PE=1 SV=1
Length = 365
Score = 31.6 bits (70), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 9 KIKNTCPSCNIIIHQSHPLQYISFDRTMQDLVYKLVPNLQANEMK----REREFYRIRGL 64
+I SC+II ++ ++ D ++ KL+PN QA +K RE+ F + G
Sbjct: 50 QISEFVDSCDIITYEFEHIK----DEVLEKCESKLIPNPQALYVKKSRIREKLFLKKHGF 105
Query: 65 PCPKDLLLEDEE 76
P P+ L+++ +E
Sbjct: 106 PVPEFLVIKRDE 117
>sp|Q6TFL4|KLH24_HUMAN Kelch-like protein 24 OS=Homo sapiens GN=KLHL24 PE=2 SV=1
Length = 600
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 103 ATTSSLKTL--KKRFIRLSSQATITHLKKFVALKLLDEKSKYKEIDILCNDELLGKDHTL 160
A T SLKTL K + L + ++ ++F+ L K + ID +C+DEL+ +
Sbjct: 175 ADTHSLKTLFTKCKNFALQTFEDVSQHEEFLEL------DKDELIDYICSDELVIGKEEM 228
Query: 161 KFVYITRWRFRTPPLK 176
F + RW +R L+
Sbjct: 229 VFEAVMRWVYRAVDLR 244
>sp|Q5WFJ0|PYRC_BACSK Dihydroorotase OS=Bacillus clausii (strain KSM-K16) GN=pyrC PE=3
SV=1
Length = 427
Score = 30.0 bits (66), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 31/85 (36%)
Query: 97 YLECSVATTSSLKTL---KKRFIRLSSQATITHLKKFVALKLLDEKSKYKEIDILCNDEL 153
Y C V+T S++T+ KK IR++++ T HL +LC D++
Sbjct: 225 YHVCHVSTKESVRTIRDAKKAGIRVTAEVTPHHL-------------------LLCEDDI 265
Query: 154 LGKDHTLKFVYITRWRFRTPPLKLQ 178
+GKD K PPL+ +
Sbjct: 266 IGKDPNFKM---------NPPLRAK 281
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,911,894
Number of Sequences: 539616
Number of extensions: 2751202
Number of successful extensions: 8646
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 8525
Number of HSP's gapped (non-prelim): 73
length of query: 186
length of database: 191,569,459
effective HSP length: 111
effective length of query: 75
effective length of database: 131,672,083
effective search space: 9875406225
effective search space used: 9875406225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)