Query psy7981
Match_columns 216
No_of_seqs 121 out of 1045
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 23:47:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7981.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7981hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b4u_A Bifunctional protein fo 100.0 3.5E-76 1.2E-80 524.2 22.2 203 8-214 21-223 (303)
2 1b0a_A Protein (fold bifunctio 100.0 3.3E-71 1.1E-75 490.0 22.1 203 8-214 1-203 (288)
3 4a5o_A Bifunctional protein fo 100.0 2.8E-70 9.7E-75 483.6 22.9 204 7-214 2-205 (286)
4 1a4i_A Methylenetetrahydrofola 100.0 2.2E-70 7.6E-75 487.3 21.9 205 8-214 2-209 (301)
5 2c2x_A Methylenetetrahydrofola 100.0 1E-69 3.5E-74 479.0 21.8 200 10-214 3-204 (281)
6 4a26_A Putative C-1-tetrahydro 100.0 2.2E-69 7.6E-74 480.9 22.5 205 8-214 4-211 (300)
7 3p2o_A Bifunctional protein fo 100.0 3.6E-69 1.2E-73 476.6 21.6 201 9-214 3-204 (285)
8 3l07_A Bifunctional protein fo 100.0 1.6E-68 5.6E-73 472.4 21.8 202 10-214 4-205 (285)
9 3ngx_A Bifunctional protein fo 100.0 3.5E-68 1.2E-72 468.2 20.8 193 11-214 2-194 (276)
10 1edz_A 5,10-methylenetetrahydr 100.0 2.4E-62 8.3E-67 439.6 17.3 202 8-214 3-246 (320)
11 1nvt_A Shikimate 5'-dehydrogen 99.5 1.5E-15 5.1E-20 132.6 2.5 142 48-205 16-161 (287)
12 1nyt_A Shikimate 5-dehydrogena 99.5 2E-15 6.8E-20 130.9 2.2 141 49-204 7-152 (271)
13 2d5c_A AROE, shikimate 5-dehyd 99.5 5.5E-15 1.9E-19 127.0 3.6 141 48-205 6-150 (263)
14 2hk9_A Shikimate dehydrogenase 99.4 4.2E-14 1.4E-18 122.8 3.5 142 48-204 17-162 (275)
15 1p77_A Shikimate 5-dehydrogena 99.4 1.4E-13 4.8E-18 119.4 2.2 130 62-205 20-153 (272)
16 2egg_A AROE, shikimate 5-dehyd 99.3 1.7E-12 5.9E-17 114.2 4.1 141 49-204 29-175 (297)
17 3fbt_A Chorismate mutase and s 98.9 1.3E-09 4.4E-14 95.8 5.5 139 49-202 11-154 (282)
18 3tnl_A Shikimate dehydrogenase 98.6 3.6E-08 1.2E-12 87.8 6.4 141 48-203 42-187 (315)
19 3o8q_A Shikimate 5-dehydrogena 97.5 0.00011 3.7E-09 64.1 5.8 127 63-203 28-159 (281)
20 3pwz_A Shikimate dehydrogenase 97.3 0.00015 5.2E-09 62.9 3.8 127 63-203 22-153 (272)
21 3don_A Shikimate dehydrogenase 97.2 0.00014 4.7E-09 63.4 2.8 127 63-203 20-150 (277)
22 3jyo_A Quinate/shikimate dehyd 97.0 0.0019 6.4E-08 56.2 7.5 129 63-203 24-160 (283)
23 3tum_A Shikimate dehydrogenase 96.8 0.0009 3.1E-08 58.0 4.3 128 63-203 26-158 (269)
24 3t4e_A Quinate/shikimate dehyd 96.7 0.00057 2E-08 60.5 2.5 127 63-203 51-181 (312)
25 3h9u_A Adenosylhomocysteinase; 96.7 0.0015 5.2E-08 60.5 5.0 54 149-203 190-243 (436)
26 3phh_A Shikimate dehydrogenase 95.9 0.006 2E-07 52.9 4.1 123 67-209 31-156 (269)
27 1lu9_A Methylene tetrahydromet 95.8 0.0092 3.2E-07 51.1 4.9 131 65-203 21-152 (287)
28 3n58_A Adenosylhomocysteinase; 95.8 0.012 3.9E-07 55.0 5.7 51 151-202 228-278 (464)
29 1leh_A Leucine dehydrogenase; 95.7 0.011 3.6E-07 53.4 5.2 51 151-202 148-204 (364)
30 1pg5_A Aspartate carbamoyltran 95.7 0.47 1.6E-05 41.6 15.7 137 43-204 40-186 (299)
31 1npy_A Hypothetical shikimate 95.6 0.062 2.1E-06 46.2 9.5 138 47-203 11-152 (271)
32 2dvm_A Malic enzyme, 439AA lon 95.4 0.019 6.7E-07 53.1 6.0 140 40-201 62-219 (439)
33 3e8x_A Putative NAD-dependent 95.4 0.015 5.3E-07 47.3 4.6 44 166-209 17-60 (236)
34 4f2g_A Otcase 1, ornithine car 95.1 0.42 1.4E-05 42.2 13.3 133 43-202 47-186 (309)
35 3aoe_E Glutamate dehydrogenase 94.9 0.028 9.6E-07 51.7 5.4 53 149-202 193-250 (419)
36 3k92_A NAD-GDH, NAD-specific g 94.9 0.037 1.3E-06 51.0 6.0 54 149-203 196-254 (424)
37 3ond_A Adenosylhomocysteinase; 94.8 0.027 9.4E-07 52.8 5.0 50 153-203 247-297 (488)
38 2i6u_A Otcase, ornithine carba 94.8 0.82 2.8E-05 40.2 14.2 138 43-206 41-185 (307)
39 3aog_A Glutamate dehydrogenase 94.7 0.035 1.2E-06 51.4 5.5 54 149-203 210-268 (440)
40 3r1i_A Short-chain type dehydr 94.5 0.034 1.1E-06 47.2 4.6 44 166-209 28-71 (276)
41 3u62_A Shikimate dehydrogenase 94.5 0.018 6.2E-07 49.1 2.8 120 63-203 20-141 (253)
42 2ef0_A Ornithine carbamoyltran 94.5 1.1 3.6E-05 39.4 14.1 140 43-205 47-189 (301)
43 1vl6_A Malate oxidoreductase; 94.5 0.16 5.5E-06 46.2 9.1 146 41-203 69-225 (388)
44 1pvv_A Otcase, ornithine carba 94.3 0.27 9.2E-06 43.5 10.0 140 43-205 48-190 (315)
45 3sds_A Ornithine carbamoyltran 94.3 0.75 2.6E-05 41.3 13.0 141 43-205 68-223 (353)
46 3csu_A Protein (aspartate carb 94.3 2 6.9E-05 37.7 15.6 173 12-205 9-192 (310)
47 4imr_A 3-oxoacyl-(acyl-carrier 94.3 0.042 1.5E-06 46.5 4.6 44 166-209 29-72 (275)
48 4a8t_A Putrescine carbamoyltra 94.2 0.32 1.1E-05 43.5 10.4 124 61-206 80-211 (339)
49 2yfq_A Padgh, NAD-GDH, NAD-spe 94.2 0.028 9.7E-07 51.7 3.6 54 149-203 187-245 (421)
50 3gvp_A Adenosylhomocysteinase 94.2 0.061 2.1E-06 49.7 5.8 50 152-202 201-251 (435)
51 1dxh_A Ornithine carbamoyltran 94.1 0.29 9.8E-06 43.7 9.8 137 44-205 48-191 (335)
52 3uf0_A Short-chain dehydrogena 94.1 0.05 1.7E-06 46.0 4.7 42 166-208 27-68 (273)
53 2w37_A Ornithine carbamoyltran 94.0 0.35 1.2E-05 43.6 10.3 137 43-205 69-212 (359)
54 3i1j_A Oxidoreductase, short c 94.0 0.031 1E-06 45.8 3.1 43 166-208 10-52 (247)
55 1c1d_A L-phenylalanine dehydro 94.0 0.076 2.6E-06 47.7 5.9 54 149-203 149-207 (355)
56 3rih_A Short chain dehydrogena 94.0 0.045 1.5E-06 47.0 4.2 44 166-209 37-80 (293)
57 3d4o_A Dipicolinate synthase s 93.9 0.076 2.6E-06 45.6 5.6 49 154-203 138-187 (293)
58 1oth_A Protein (ornithine tran 93.8 0.35 1.2E-05 42.9 9.8 137 43-205 48-190 (321)
59 1h5q_A NADP-dependent mannitol 93.8 0.055 1.9E-06 44.4 4.3 42 166-207 10-51 (265)
60 3gd5_A Otcase, ornithine carba 93.8 0.52 1.8E-05 41.9 10.8 139 43-205 50-192 (323)
61 3ppi_A 3-hydroxyacyl-COA dehyd 93.8 0.03 1E-06 47.1 2.7 44 166-209 26-69 (281)
62 3f9i_A 3-oxoacyl-[acyl-carrier 93.8 0.034 1.2E-06 45.7 3.0 45 165-209 9-53 (249)
63 1vlv_A Otcase, ornithine carba 93.7 0.41 1.4E-05 42.5 10.1 139 43-204 60-202 (325)
64 3gem_A Short chain dehydrogena 93.7 0.044 1.5E-06 46.0 3.5 44 166-209 23-66 (260)
65 3ctm_A Carbonyl reductase; alc 93.7 0.065 2.2E-06 44.7 4.6 55 149-208 18-72 (279)
66 1vl8_A Gluconate 5-dehydrogena 93.6 0.044 1.5E-06 46.0 3.5 40 165-204 16-55 (267)
67 3grp_A 3-oxoacyl-(acyl carrier 93.6 0.038 1.3E-06 46.5 3.1 45 166-210 23-67 (266)
68 4amu_A Ornithine carbamoyltran 93.6 0.48 1.7E-05 42.7 10.4 121 61-204 88-215 (365)
69 1yb1_A 17-beta-hydroxysteroid 93.6 0.046 1.6E-06 45.8 3.5 42 166-207 27-68 (272)
70 3rd5_A Mypaa.01249.C; ssgcid, 93.6 0.052 1.8E-06 45.9 3.8 44 166-209 12-55 (291)
71 4a8p_A Putrescine carbamoyltra 93.6 0.34 1.2E-05 43.6 9.3 141 43-206 43-189 (355)
72 4iin_A 3-ketoacyl-acyl carrier 93.6 0.054 1.9E-06 45.3 3.9 42 165-206 24-65 (271)
73 2bgk_A Rhizome secoisolaricire 93.5 0.049 1.7E-06 45.2 3.5 39 166-204 12-50 (278)
74 1v9l_A Glutamate dehydrogenase 93.5 0.069 2.4E-06 49.1 4.8 54 149-203 185-243 (421)
75 4egf_A L-xylulose reductase; s 93.5 0.04 1.4E-06 46.2 3.0 42 167-208 17-58 (266)
76 3gvc_A Oxidoreductase, probabl 93.5 0.042 1.4E-06 46.6 3.1 43 166-208 25-67 (277)
77 1xg5_A ARPG836; short chain de 93.5 0.044 1.5E-06 45.9 3.2 41 167-207 29-69 (279)
78 2zat_A Dehydrogenase/reductase 93.5 0.043 1.5E-06 45.5 3.1 42 166-207 10-51 (260)
79 4ibo_A Gluconate dehydrogenase 93.5 0.039 1.3E-06 46.6 2.9 42 166-207 22-63 (271)
80 3tjr_A Short chain dehydrogena 93.4 0.049 1.7E-06 46.6 3.5 43 167-209 28-70 (301)
81 1ae1_A Tropinone reductase-I; 93.4 0.05 1.7E-06 45.7 3.5 42 166-207 17-58 (273)
82 1xq1_A Putative tropinone redu 93.4 0.042 1.4E-06 45.5 3.0 42 166-207 10-51 (266)
83 4fgs_A Probable dehydrogenase 93.4 0.049 1.7E-06 47.0 3.4 44 167-210 26-69 (273)
84 1o5i_A 3-oxoacyl-(acyl carrier 93.3 0.078 2.7E-06 44.0 4.5 40 164-203 13-52 (249)
85 1w6u_A 2,4-dienoyl-COA reducta 93.3 0.054 1.9E-06 45.7 3.5 41 167-207 23-63 (302)
86 4dqx_A Probable oxidoreductase 93.3 0.054 1.8E-06 45.9 3.4 43 166-208 23-65 (277)
87 2b4q_A Rhamnolipids biosynthes 93.2 0.058 2E-06 45.6 3.6 39 167-205 26-64 (276)
88 3gdg_A Probable NADP-dependent 93.2 0.11 3.7E-06 43.1 5.2 42 166-207 16-59 (267)
89 4dry_A 3-oxoacyl-[acyl-carrier 93.2 0.039 1.3E-06 46.9 2.5 44 165-208 28-71 (281)
90 3ijr_A Oxidoreductase, short c 93.2 0.072 2.5E-06 45.4 4.2 40 166-205 43-82 (291)
91 2rhc_B Actinorhodin polyketide 93.2 0.057 1.9E-06 45.5 3.5 41 167-207 19-59 (277)
92 3rkr_A Short chain oxidoreduct 93.2 0.05 1.7E-06 45.3 3.1 42 167-208 26-67 (262)
93 4fc7_A Peroxisomal 2,4-dienoyl 93.2 0.059 2E-06 45.4 3.5 41 167-207 24-64 (277)
94 1yxm_A Pecra, peroxisomal tran 93.1 0.059 2E-06 45.5 3.5 39 166-204 14-52 (303)
95 2tmg_A Protein (glutamate dehy 93.1 0.11 3.8E-06 47.7 5.5 55 148-203 183-243 (415)
96 3jtm_A Formate dehydrogenase, 93.1 1.8 6.1E-05 38.5 13.3 38 165-203 159-196 (351)
97 2hsg_A Glucose-resistance amyl 93.0 1.5 5.1E-05 37.0 12.1 94 11-107 21-124 (332)
98 1uzm_A 3-oxoacyl-[acyl-carrier 92.9 0.069 2.3E-06 44.2 3.5 40 165-204 10-49 (247)
99 3vtz_A Glucose 1-dehydrogenase 92.7 0.09 3.1E-06 44.2 4.0 40 165-204 9-48 (269)
100 3pgx_A Carveol dehydrogenase; 92.6 0.076 2.6E-06 44.6 3.5 37 166-202 11-47 (280)
101 4dmm_A 3-oxoacyl-[acyl-carrier 92.6 0.085 2.9E-06 44.4 3.8 41 165-205 23-63 (269)
102 3o38_A Short chain dehydrogena 92.6 0.077 2.6E-06 44.0 3.4 42 167-208 19-61 (266)
103 1duv_G Octase-1, ornithine tra 92.6 0.33 1.1E-05 43.3 7.7 139 44-204 47-190 (333)
104 1ja9_A 4HNR, 1,3,6,8-tetrahydr 92.6 0.066 2.2E-06 44.2 3.0 37 166-202 17-53 (274)
105 3is3_A 17BETA-hydroxysteroid d 92.6 0.088 3E-06 44.1 3.8 39 166-204 14-52 (270)
106 3r7f_A Aspartate carbamoyltran 92.6 3.1 0.00011 36.5 13.8 121 61-202 53-181 (304)
107 3grf_A Ornithine carbamoyltran 92.5 1.6 5.5E-05 38.7 12.0 140 43-204 46-196 (328)
108 3ek2_A Enoyl-(acyl-carrier-pro 92.5 0.13 4.6E-06 42.3 4.8 40 165-204 9-50 (271)
109 3cxt_A Dehydrogenase with diff 92.4 0.082 2.8E-06 45.1 3.4 39 166-204 30-68 (291)
110 3v2g_A 3-oxoacyl-[acyl-carrier 92.4 0.11 3.9E-06 43.7 4.3 40 165-204 26-65 (271)
111 3v8b_A Putative dehydrogenase, 92.4 0.079 2.7E-06 45.0 3.3 44 166-209 24-67 (283)
112 3ftp_A 3-oxoacyl-[acyl-carrier 92.4 0.07 2.4E-06 45.0 2.9 43 166-208 24-66 (270)
113 1xhl_A Short-chain dehydrogena 92.3 0.073 2.5E-06 45.5 3.0 41 167-207 23-63 (297)
114 3v2h_A D-beta-hydroxybutyrate 92.3 0.12 4.2E-06 43.7 4.3 39 166-204 21-59 (281)
115 3dbi_A Sugar-binding transcrip 92.3 0.74 2.5E-05 39.0 9.3 93 11-106 22-126 (338)
116 2c07_A 3-oxoacyl-(acyl-carrier 92.2 0.088 3E-06 44.4 3.4 38 166-203 40-77 (285)
117 2x9g_A PTR1, pteridine reducta 92.2 0.07 2.4E-06 45.0 2.8 38 167-204 20-57 (288)
118 2nm0_A Probable 3-oxacyl-(acyl 92.2 0.12 4.1E-06 43.1 4.2 39 166-204 17-55 (253)
119 4dyv_A Short-chain dehydrogena 92.2 0.069 2.4E-06 45.1 2.6 43 167-209 25-67 (272)
120 3uxy_A Short-chain dehydrogena 92.2 0.12 4.2E-06 43.4 4.1 39 167-205 25-63 (266)
121 3qlj_A Short chain dehydrogena 92.2 0.13 4.4E-06 44.3 4.4 37 167-203 24-60 (322)
122 3d6n_B Aspartate carbamoyltran 92.1 1.4 4.8E-05 38.5 11.0 130 54-203 44-181 (291)
123 3oj0_A Glutr, glutamyl-tRNA re 92.1 0.089 3E-06 39.9 2.9 47 152-203 7-53 (144)
124 1xu9_A Corticosteroid 11-beta- 92.1 0.077 2.6E-06 44.7 2.8 42 167-208 25-66 (286)
125 1gtm_A Glutamate dehydrogenase 92.1 0.16 5.4E-06 46.6 5.0 52 148-200 185-242 (419)
126 2o4c_A Erythronate-4-phosphate 92.0 0.16 5.4E-06 46.0 4.9 45 157-202 103-147 (380)
127 3nrc_A Enoyl-[acyl-carrier-pro 92.0 0.15 5.3E-06 42.8 4.6 38 167-204 23-62 (280)
128 2pzm_A Putative nucleotide sug 92.0 0.16 5.3E-06 43.4 4.7 39 166-204 16-54 (330)
129 4ekn_B Aspartate carbamoyltran 91.9 6.1 0.00021 34.6 16.8 137 43-204 42-188 (306)
130 3t7c_A Carveol dehydrogenase; 91.8 0.11 3.8E-06 44.3 3.5 38 166-203 24-61 (299)
131 3tpf_A Otcase, ornithine carba 91.7 1.1 3.7E-05 39.4 9.9 137 43-205 38-181 (307)
132 3d64_A Adenosylhomocysteinase; 91.7 0.19 6.5E-06 47.1 5.3 41 163-204 270-310 (494)
133 3dfz_A SIRC, precorrin-2 dehyd 91.6 0.1 3.6E-06 43.8 3.1 38 165-203 26-63 (223)
134 3sju_A Keto reductase; short-c 91.6 0.1 3.5E-06 44.0 3.0 41 168-208 22-62 (279)
135 1g0o_A Trihydroxynaphthalene r 91.6 0.13 4.4E-06 43.3 3.6 39 166-204 25-63 (283)
136 3mw9_A GDH 1, glutamate dehydr 91.5 0.21 7E-06 47.0 5.2 51 149-200 211-273 (501)
137 3r3s_A Oxidoreductase; structu 91.4 0.18 6.2E-06 42.9 4.4 38 166-203 45-82 (294)
138 1qpz_A PURA, protein (purine n 91.3 0.68 2.3E-05 39.4 8.1 93 11-106 19-121 (340)
139 3oet_A Erythronate-4-phosphate 91.3 0.21 7.2E-06 45.3 4.9 44 158-202 107-150 (381)
140 2rir_A Dipicolinate synthase, 91.3 0.19 6.5E-06 43.1 4.5 42 162-204 149-190 (300)
141 2p91_A Enoyl-[acyl-carrier-pro 91.2 0.22 7.4E-06 41.9 4.7 37 168-204 19-57 (285)
142 1sny_A Sniffer CG10964-PA; alp 91.2 0.2 7E-06 41.2 4.4 41 166-206 17-60 (267)
143 4da9_A Short-chain dehydrogena 91.2 0.19 6.5E-06 42.5 4.3 39 166-204 25-63 (280)
144 3k31_A Enoyl-(acyl-carrier-pro 91.1 0.25 8.7E-06 42.0 5.1 39 166-204 26-66 (296)
145 4id9_A Short-chain dehydrogena 91.0 0.16 5.4E-06 43.4 3.7 39 166-204 15-53 (347)
146 1jye_A Lactose operon represso 90.9 1 3.5E-05 38.5 8.8 97 11-109 22-128 (349)
147 3orf_A Dihydropteridine reduct 90.9 0.2 6.9E-06 41.4 4.1 40 167-206 19-58 (251)
148 1v8b_A Adenosylhomocysteinase; 90.8 0.2 6.9E-06 46.7 4.5 41 163-204 250-290 (479)
149 3p19_A BFPVVD8, putative blue 90.8 0.11 3.7E-06 43.7 2.4 40 165-204 11-50 (266)
150 4h31_A Otcase, ornithine carba 90.7 0.75 2.6E-05 41.3 8.0 137 43-204 72-216 (358)
151 1ml4_A Aspartate transcarbamoy 90.7 2.1 7.1E-05 37.6 10.6 140 43-205 46-192 (308)
152 3u5t_A 3-oxoacyl-[acyl-carrier 90.6 0.19 6.4E-06 42.2 3.8 39 167-205 24-62 (267)
153 1bgv_A Glutamate dehydrogenase 90.4 0.21 7.2E-06 46.3 4.1 53 149-202 205-262 (449)
154 2bka_A CC3, TAT-interacting pr 90.4 0.17 5.9E-06 40.8 3.2 37 168-204 16-54 (242)
155 2o7s_A DHQ-SDH PR, bifunctiona 90.3 0.15 5.1E-06 47.6 3.1 122 63-203 254-396 (523)
156 3ruf_A WBGU; rossmann fold, UD 90.3 0.27 9.2E-06 42.0 4.5 51 150-205 10-60 (351)
157 4iiu_A 3-oxoacyl-[acyl-carrier 90.3 0.19 6.5E-06 41.8 3.5 38 167-204 23-60 (267)
158 3un1_A Probable oxidoreductase 90.2 0.26 8.9E-06 41.1 4.3 38 167-204 25-62 (260)
159 3kvo_A Hydroxysteroid dehydrog 90.2 0.3 1E-05 42.9 4.9 40 166-205 41-80 (346)
160 3grk_A Enoyl-(acyl-carrier-pro 90.1 0.32 1.1E-05 41.4 4.8 37 167-203 28-66 (293)
161 2q1w_A Putative nucleotide sug 90.0 0.29 1E-05 41.7 4.4 38 167-204 18-55 (333)
162 2yfk_A Aspartate/ornithine car 89.9 0.33 1.1E-05 44.6 5.0 134 61-204 77-229 (418)
163 3llv_A Exopolyphosphatase-rela 89.8 0.18 6.2E-06 37.7 2.7 34 169-203 5-38 (141)
164 2qhx_A Pteridine reductase 1; 89.8 0.17 5.7E-06 44.0 2.8 34 168-201 44-77 (328)
165 3oec_A Carveol dehydrogenase ( 89.8 0.24 8.3E-06 42.6 3.8 36 167-202 43-78 (317)
166 2nwq_A Probable short-chain de 89.4 0.23 8E-06 41.8 3.4 41 167-208 19-59 (272)
167 4fcc_A Glutamate dehydrogenase 89.3 0.5 1.7E-05 43.8 5.7 51 149-200 210-264 (450)
168 3ic5_A Putative saccharopine d 89.1 0.21 7.1E-06 35.5 2.5 37 168-205 3-40 (118)
169 2bma_A Glutamate dehydrogenase 89.0 0.32 1.1E-05 45.4 4.2 52 150-202 228-284 (470)
170 4ep1_A Otcase, ornithine carba 88.9 7.2 0.00024 34.7 12.8 167 13-205 39-214 (340)
171 3gk3_A Acetoacetyl-COA reducta 88.8 0.29 9.8E-06 40.8 3.5 37 168-204 23-59 (269)
172 2o20_A Catabolite control prot 88.8 1.2 4E-05 37.7 7.4 94 11-107 24-127 (332)
173 2a9f_A Putative malic enzyme ( 88.8 1.1 3.9E-05 40.8 7.6 146 41-203 65-221 (398)
174 4e3z_A Putative oxidoreductase 88.8 0.28 9.7E-06 40.8 3.4 38 168-205 24-61 (272)
175 2g1u_A Hypothetical protein TM 88.7 0.44 1.5E-05 36.4 4.3 38 165-203 14-51 (155)
176 1jx6_A LUXP protein; protein-l 88.7 2.8 9.5E-05 35.3 9.7 87 18-105 14-110 (342)
177 2hmt_A YUAA protein; RCK, KTN, 88.3 0.3 1E-05 35.9 2.9 35 168-203 4-38 (144)
178 4g2n_A D-isomer specific 2-hyd 88.3 0.65 2.2E-05 41.3 5.6 38 165-203 168-205 (345)
179 3slg_A PBGP3 protein; structur 88.1 0.35 1.2E-05 41.7 3.6 41 168-208 22-63 (372)
180 2hcy_A Alcohol dehydrogenase 1 88.0 0.97 3.3E-05 39.1 6.4 54 149-203 150-203 (347)
181 3rku_A Oxidoreductase YMR226C; 87.9 0.15 5E-06 43.5 1.0 43 167-209 30-75 (287)
182 3q98_A Transcarbamylase; rossm 87.8 0.56 1.9E-05 42.8 4.9 129 63-203 82-231 (399)
183 1pqw_A Polyketide synthase; ro 87.7 0.38 1.3E-05 38.0 3.4 54 149-202 18-71 (198)
184 4dgs_A Dehydrogenase; structur 87.6 0.84 2.9E-05 40.5 5.9 38 165-203 166-203 (340)
185 2b69_A UDP-glucuronate decarbo 87.6 0.53 1.8E-05 40.1 4.4 36 168-203 25-60 (343)
186 2cuk_A Glycerate dehydrogenase 87.6 0.69 2.4E-05 40.3 5.2 38 165-203 139-176 (311)
187 2x6t_A ADP-L-glycero-D-manno-h 87.6 0.38 1.3E-05 41.3 3.5 38 167-204 43-81 (357)
188 3gms_A Putative NADPH:quinone 87.5 0.72 2.5E-05 39.8 5.3 60 149-208 124-183 (340)
189 2hrz_A AGR_C_4963P, nucleoside 87.5 0.37 1.3E-05 40.9 3.4 40 165-204 9-55 (342)
190 3oml_A GH14720P, peroxisomal m 87.5 0.46 1.6E-05 45.1 4.3 38 165-202 14-51 (613)
191 3ba1_A HPPR, hydroxyphenylpyru 87.4 0.62 2.1E-05 41.1 4.9 38 165-203 159-196 (333)
192 2q1s_A Putative nucleotide sug 87.3 0.58 2E-05 40.7 4.6 38 167-204 29-67 (377)
193 1lss_A TRK system potassium up 87.2 0.39 1.3E-05 35.1 3.0 33 170-203 4-36 (140)
194 3pp8_A Glyoxylate/hydroxypyruv 87.2 0.63 2.2E-05 40.8 4.8 38 165-203 134-171 (315)
195 1sb8_A WBPP; epimerase, 4-epim 87.2 0.39 1.3E-05 41.1 3.4 38 167-204 24-61 (352)
196 2gcg_A Glyoxylate reductase/hy 87.1 0.56 1.9E-05 41.0 4.4 39 166-205 151-189 (330)
197 2yq5_A D-isomer specific 2-hyd 86.9 0.59 2E-05 41.6 4.5 39 165-204 143-181 (343)
198 3gvx_A Glycerate dehydrogenase 86.8 0.66 2.3E-05 40.2 4.6 37 166-203 118-154 (290)
199 1dxy_A D-2-hydroxyisocaproate 86.7 0.68 2.3E-05 40.7 4.7 39 165-204 140-178 (333)
200 1rjw_A ADH-HT, alcohol dehydro 86.6 0.93 3.2E-05 39.1 5.5 52 149-202 145-196 (339)
201 1xdw_A NAD+-dependent (R)-2-hy 86.5 0.7 2.4E-05 40.5 4.7 39 165-204 141-179 (331)
202 1yqd_A Sinapyl alcohol dehydro 86.3 1.4 4.9E-05 38.5 6.6 58 149-207 167-224 (366)
203 4e5n_A Thermostable phosphite 86.2 0.89 3.1E-05 40.0 5.2 39 165-204 140-178 (330)
204 1zq6_A Otcase, ornithine carba 86.1 0.8 2.7E-05 41.2 4.9 167 12-203 26-229 (359)
205 2w2k_A D-mandelate dehydrogena 86.0 1 3.4E-05 39.8 5.5 40 165-205 158-198 (348)
206 3k5p_A D-3-phosphoglycerate de 85.9 1 3.5E-05 41.2 5.6 38 165-203 151-188 (416)
207 1qp8_A Formate dehydrogenase; 85.8 1.2 4.1E-05 38.6 5.8 36 167-203 121-156 (303)
208 3kjx_A Transcriptional regulat 85.8 3.9 0.00013 34.6 9.0 93 11-106 29-131 (344)
209 3dtt_A NADP oxidoreductase; st 85.7 0.64 2.2E-05 38.5 3.8 40 163-203 12-51 (245)
210 3jvd_A Transcriptional regulat 85.3 1.9 6.4E-05 36.7 6.7 94 11-108 25-128 (333)
211 2ekl_A D-3-phosphoglycerate de 85.2 0.85 2.9E-05 39.7 4.5 39 165-204 137-175 (313)
212 1rpn_A GDP-mannose 4,6-dehydra 85.1 0.84 2.9E-05 38.5 4.4 39 167-205 11-49 (335)
213 4gcm_A TRXR, thioredoxin reduc 85.1 0.8 2.7E-05 38.3 4.2 38 167-205 142-179 (312)
214 1mx3_A CTBP1, C-terminal bindi 85.1 1.2 4.2E-05 39.4 5.6 37 166-203 164-200 (347)
215 2c5a_A GDP-mannose-3', 5'-epim 84.9 0.96 3.3E-05 39.3 4.8 38 167-204 26-63 (379)
216 2d0i_A Dehydrogenase; structur 84.8 1 3.4E-05 39.6 4.9 38 166-204 142-179 (333)
217 3c85_A Putative glutathione-re 84.7 0.65 2.2E-05 36.2 3.3 37 166-203 35-72 (183)
218 3ctp_A Periplasmic binding pro 84.7 3 0.0001 35.1 7.7 94 11-109 21-124 (330)
219 4a5l_A Thioredoxin reductase; 84.5 1 3.5E-05 37.4 4.6 37 168-205 150-186 (314)
220 2gn4_A FLAA1 protein, UDP-GLCN 84.5 0.54 1.8E-05 40.7 2.9 37 167-203 18-56 (344)
221 3nzo_A UDP-N-acetylglucosamine 84.5 0.45 1.6E-05 42.3 2.5 40 168-207 33-73 (399)
222 3ksm_A ABC-type sugar transpor 84.4 2.3 7.7E-05 34.3 6.5 65 42-106 1-66 (276)
223 3evt_A Phosphoglycerate dehydr 84.3 1.1 3.6E-05 39.5 4.8 38 165-203 132-169 (324)
224 1l7d_A Nicotinamide nucleotide 84.3 1.6 5.5E-05 38.8 6.0 40 167-207 169-208 (384)
225 1wwk_A Phosphoglycerate dehydr 84.2 1 3.4E-05 39.1 4.5 38 166-204 138-175 (307)
226 3h5t_A Transcriptional regulat 84.1 2.5 8.4E-05 36.2 7.0 85 11-106 28-135 (366)
227 3bil_A Probable LACI-family tr 84.0 2.8 9.4E-05 35.8 7.2 93 11-106 27-129 (348)
228 3hg7_A D-isomer specific 2-hyd 83.9 1 3.6E-05 39.6 4.5 38 165-203 135-172 (324)
229 2cf5_A Atccad5, CAD, cinnamyl 83.9 1.7 5.9E-05 37.7 6.0 55 149-204 160-214 (357)
230 3rg8_A Phosphoribosylaminoimid 83.8 8.6 0.00029 30.7 9.5 64 42-107 3-66 (159)
231 3h5o_A Transcriptional regulat 83.7 10 0.00036 31.8 10.7 89 11-107 23-126 (339)
232 2pi1_A D-lactate dehydrogenase 83.6 0.79 2.7E-05 40.4 3.7 40 165-205 136-175 (334)
233 1iz0_A Quinone oxidoreductase; 83.6 1.2 4.3E-05 37.5 4.8 55 150-205 107-161 (302)
234 1jvb_A NAD(H)-dependent alcoho 83.6 1.4 4.9E-05 38.0 5.3 54 149-203 151-205 (347)
235 2dbq_A Glyoxylate reductase; D 83.6 1.2 3.9E-05 39.1 4.7 39 165-204 145-183 (334)
236 3gg9_A D-3-phosphoglycerate de 83.6 0.9 3.1E-05 40.4 4.0 38 165-203 155-192 (352)
237 3r3j_A Glutamate dehydrogenase 83.6 0.74 2.5E-05 42.8 3.6 52 151-203 216-272 (456)
238 3k9c_A Transcriptional regulat 83.5 13 0.00044 30.3 11.0 65 40-108 11-75 (289)
239 4b7c_A Probable oxidoreductase 83.5 1.1 3.8E-05 38.4 4.5 53 150-203 130-183 (336)
240 1wly_A CAAR, 2-haloacrylate re 83.5 1.2 4.3E-05 38.1 4.8 36 168-203 144-179 (333)
241 1v3u_A Leukotriene B4 12- hydr 83.2 1.4 4.8E-05 37.6 5.0 36 168-203 144-179 (333)
242 3qvo_A NMRA family protein; st 83.2 0.59 2E-05 37.9 2.5 36 169-204 22-58 (236)
243 1j4a_A D-LDH, D-lactate dehydr 82.9 1.2 4E-05 39.2 4.5 38 166-204 142-179 (333)
244 2axq_A Saccharopine dehydrogen 82.8 0.67 2.3E-05 42.8 3.0 39 164-203 17-56 (467)
245 2g76_A 3-PGDH, D-3-phosphoglyc 82.5 1.3 4.3E-05 39.2 4.5 39 165-204 160-198 (335)
246 1gdh_A D-glycerate dehydrogena 82.4 1.3 4.3E-05 38.7 4.5 36 166-202 142-177 (320)
247 3oh8_A Nucleoside-diphosphate 82.4 1.2 4.2E-05 40.8 4.6 35 170-204 147-181 (516)
248 3kzn_A Aotcase, N-acetylornith 82.2 2.2 7.6E-05 38.1 6.1 171 12-203 26-229 (359)
249 4hy3_A Phosphoglycerate oxidor 81.9 1.3 4.5E-05 39.6 4.5 38 165-203 171-208 (365)
250 4f2d_A L-arabinose isomerase; 81.9 2.8 9.5E-05 39.2 6.8 45 71-115 44-88 (500)
251 2eez_A Alanine dehydrogenase; 81.8 0.99 3.4E-05 39.9 3.6 37 167-204 163-199 (369)
252 2c0c_A Zinc binding alcohol de 80.9 2.5 8.6E-05 36.8 5.9 52 151-202 145-196 (362)
253 4eye_A Probable oxidoreductase 80.9 2.4 8.2E-05 36.6 5.7 58 150-207 140-197 (342)
254 2raf_A Putative dinucleotide-b 80.9 1.6 5.4E-05 35.3 4.2 38 165-203 14-51 (209)
255 4grd_A N5-CAIR mutase, phospho 80.9 14 0.00047 29.9 9.7 66 39-107 10-75 (173)
256 1sc6_A PGDH, D-3-phosphoglycer 80.8 1.7 5.7E-05 39.4 4.8 37 165-202 140-176 (404)
257 1n7h_A GDP-D-mannose-4,6-dehyd 80.7 1.5 5.3E-05 37.7 4.4 34 171-204 29-62 (381)
258 1yb5_A Quinone oxidoreductase; 80.5 1.9 6.5E-05 37.5 4.9 52 150-202 151-203 (351)
259 1uuf_A YAHK, zinc-type alcohol 80.4 3 0.0001 36.5 6.2 53 150-204 176-228 (369)
260 3p2y_A Alanine dehydrogenase/p 80.3 2.1 7.4E-05 38.6 5.3 39 168-207 182-220 (381)
261 2j6i_A Formate dehydrogenase; 80.3 1.7 5.9E-05 38.6 4.6 38 165-203 159-197 (364)
262 3qwb_A Probable quinone oxidor 80.0 1.6 5.4E-05 37.4 4.2 53 151-203 130-182 (334)
263 4egb_A DTDP-glucose 4,6-dehydr 79.7 0.99 3.4E-05 38.3 2.8 37 167-203 21-59 (346)
264 1jw9_B Molybdopterin biosynthe 79.6 0.71 2.4E-05 38.7 1.8 39 167-206 28-67 (249)
265 1t2a_A GDP-mannose 4,6 dehydra 79.4 1.8 6.2E-05 37.2 4.4 33 171-203 25-57 (375)
266 2j3h_A NADP-dependent oxidored 79.2 2.1 7.2E-05 36.7 4.8 35 169-203 155-189 (345)
267 4dio_A NAD(P) transhydrogenase 79.2 2.9 9.8E-05 38.1 5.8 40 167-207 187-226 (405)
268 3ce6_A Adenosylhomocysteinase; 79.0 2.2 7.6E-05 39.8 5.1 39 164-203 268-306 (494)
269 2et6_A (3R)-hydroxyacyl-COA de 78.6 1.6 5.6E-05 41.3 4.1 37 166-202 318-354 (604)
270 2xve_A Flavin-containing monoo 78.5 1.8 6.2E-05 39.1 4.3 38 167-205 194-231 (464)
271 3jyn_A Quinone oxidoreductase; 78.4 1.5 5E-05 37.6 3.5 53 150-202 121-173 (325)
272 1qor_A Quinone oxidoreductase; 78.1 1.5 5.3E-05 37.3 3.5 34 169-202 140-173 (327)
273 2amj_A Modulator of drug activ 78.0 9.8 0.00033 30.5 8.2 62 42-109 13-80 (204)
274 3nv9_A Malic enzyme; rossmann 77.8 3.3 0.00011 38.7 5.8 148 40-203 89-254 (487)
275 3fbs_A Oxidoreductase; structu 77.7 2 6.8E-05 35.0 4.0 40 166-207 137-176 (297)
276 1ygy_A PGDH, D-3-phosphoglycer 77.6 1.8 6E-05 40.4 4.0 38 165-203 137-174 (529)
277 2zb4_A Prostaglandin reductase 77.2 2.3 7.7E-05 36.8 4.3 52 151-203 140-195 (357)
278 1piw_A Hypothetical zinc-type 77.0 3.9 0.00013 35.4 5.8 57 149-207 160-216 (360)
279 1js1_X Transcarbamylase; alpha 76.8 17 0.00059 32.0 10.0 141 43-206 38-208 (324)
280 2eih_A Alcohol dehydrogenase; 76.6 2.9 0.0001 35.9 4.9 53 150-203 147-200 (343)
281 3k4h_A Putative transcriptiona 76.4 26 0.00088 28.2 10.5 65 39-106 6-76 (292)
282 3h75_A Periplasmic sugar-bindi 76.4 8.3 0.00029 32.5 7.7 64 41-106 3-69 (350)
283 3o1i_D Periplasmic protein TOR 76.2 12 0.00041 30.4 8.4 68 40-108 4-72 (304)
284 2vhw_A Alanine dehydrogenase; 76.1 2.4 8.3E-05 37.6 4.3 37 167-204 165-201 (377)
285 2nac_A NAD-dependent formate d 76.1 3.3 0.00011 37.4 5.2 38 165-203 186-223 (393)
286 1x13_A NAD(P) transhydrogenase 76.1 2.3 7.9E-05 38.2 4.2 40 167-207 169-208 (401)
287 2qu7_A Putative transcriptiona 76.0 9.6 0.00033 30.9 7.7 67 39-108 6-72 (288)
288 1zsy_A Mitochondrial 2-enoyl t 76.0 3.9 0.00013 35.4 5.5 52 149-200 147-198 (357)
289 2vn8_A Reticulon-4-interacting 75.9 2.8 9.6E-05 36.6 4.6 53 149-201 159-215 (375)
290 4eue_A Putative reductase CA_C 75.8 6.2 0.00021 35.8 7.0 54 151-204 34-96 (418)
291 4dll_A 2-hydroxy-3-oxopropiona 75.7 2.5 8.7E-05 36.3 4.3 35 168-203 29-63 (320)
292 2gv8_A Monooxygenase; FMO, FAD 75.2 2 7E-05 38.2 3.6 37 167-204 209-246 (447)
293 3pi7_A NADH oxidoreductase; gr 75.2 1.8 6E-05 37.4 3.1 56 149-206 145-201 (349)
294 1cjc_A Protein (adrenodoxin re 75.0 4.3 0.00015 36.8 5.8 38 167-205 142-200 (460)
295 3fbg_A Putative arginate lyase 74.8 2.7 9.2E-05 36.2 4.2 55 149-203 124-184 (346)
296 3e3m_A Transcriptional regulat 74.8 9.7 0.00033 32.3 7.7 88 11-106 31-133 (355)
297 3uog_A Alcohol dehydrogenase; 74.8 3.8 0.00013 35.6 5.2 53 149-202 169-221 (363)
298 2h6e_A ADH-4, D-arabinose 1-de 74.6 2.6 8.8E-05 36.3 4.0 51 149-202 147-204 (344)
299 2j8z_A Quinone oxidoreductase; 74.6 2.6 9E-05 36.5 4.1 34 169-202 162-195 (354)
300 3two_A Mannitol dehydrogenase; 74.5 8.1 0.00028 33.1 7.2 58 149-208 157-214 (348)
301 3u0b_A Oxidoreductase, short c 74.3 2.4 8.2E-05 38.7 3.9 39 165-203 208-246 (454)
302 3d1c_A Flavin-containing putat 74.1 2.7 9.3E-05 35.6 4.0 37 167-204 163-199 (369)
303 3qha_A Putative oxidoreductase 74.1 4 0.00014 34.6 5.0 38 171-209 16-53 (296)
304 3lft_A Uncharacterized protein 74.0 15 0.00053 30.1 8.6 64 42-106 3-69 (295)
305 3gbv_A Putative LACI-family tr 74.0 15 0.0005 29.8 8.3 69 39-108 6-78 (304)
306 1xmp_A PURE, phosphoribosylami 74.0 14 0.00047 29.8 7.8 63 40-105 10-72 (170)
307 3s8m_A Enoyl-ACP reductase; ro 73.8 4.5 0.00015 37.0 5.5 39 167-205 58-97 (422)
308 1zud_1 Adenylyltransferase THI 73.8 2.3 7.8E-05 35.6 3.3 39 167-206 25-64 (251)
309 4f6c_A AUSA reductase domain p 73.8 1.8 6.1E-05 38.2 2.8 39 167-205 66-104 (427)
310 2uv8_A Fatty acid synthase sub 73.6 4.4 0.00015 43.7 6.1 44 161-204 666-710 (1887)
311 3oow_A Phosphoribosylaminoimid 73.5 16 0.00055 29.3 8.1 63 41-106 5-67 (166)
312 3qk7_A Transcriptional regulat 73.2 32 0.0011 28.0 10.4 66 39-108 4-74 (294)
313 4hv4_A UDP-N-acetylmuramate--L 73.2 4.3 0.00015 37.3 5.4 37 168-205 20-57 (494)
314 1pjc_A Protein (L-alanine dehy 73.0 2.5 8.7E-05 37.1 3.6 36 168-204 165-200 (361)
315 3nx4_A Putative oxidoreductase 73.0 3.7 0.00013 34.8 4.5 53 152-205 129-182 (324)
316 3zu3_A Putative reductase YPO4 72.6 6 0.00021 36.0 6.1 40 166-205 43-83 (405)
317 2z2v_A Hypothetical protein PH 72.5 2.2 7.5E-05 37.9 3.1 39 163-203 9-47 (365)
318 3hwr_A 2-dehydropantoate 2-red 72.5 2 6.9E-05 36.9 2.8 42 165-208 14-55 (318)
319 3gaz_A Alcohol dehydrogenase s 72.1 3.9 0.00013 35.2 4.5 51 149-200 130-181 (343)
320 1gpj_A Glutamyl-tRNA reductase 71.8 2.9 9.8E-05 37.4 3.7 50 153-203 150-200 (404)
321 2lnd_A De novo designed protei 71.5 26 0.00087 25.2 8.5 60 25-94 39-98 (112)
322 3brq_A HTH-type transcriptiona 71.2 19 0.00064 29.0 8.3 65 40-107 18-85 (296)
323 3jy6_A Transcriptional regulat 70.9 39 0.0013 27.0 12.1 68 39-109 5-73 (276)
324 2gqw_A Ferredoxin reductase; f 70.8 3.7 0.00013 36.3 4.1 49 153-205 131-179 (408)
325 3kuu_A Phosphoribosylaminoimid 70.5 20 0.00068 29.0 8.0 64 39-105 10-73 (174)
326 3doj_A AT3G25530, dehydrogenas 70.4 4.2 0.00014 34.7 4.3 39 169-208 20-58 (310)
327 3kb6_A D-lactate dehydrogenase 70.2 4.4 0.00015 35.6 4.5 39 165-204 136-174 (334)
328 3rui_A Ubiquitin-like modifier 70.1 1.3 4.3E-05 39.5 0.9 42 168-210 32-74 (340)
329 1vdc_A NTR, NADPH dependent th 70.0 4.2 0.00014 33.9 4.2 36 168-204 157-192 (333)
330 3gwf_A Cyclohexanone monooxyge 69.9 3.9 0.00014 37.9 4.3 39 165-204 173-211 (540)
331 2uv9_A Fatty acid synthase alp 69.7 6 0.00021 42.7 6.1 43 162-204 644-687 (1878)
332 1z7e_A Protein aRNA; rossmann 69.7 3 0.0001 39.3 3.5 39 168-206 313-352 (660)
333 3fwz_A Inner membrane protein 69.7 3.8 0.00013 30.5 3.5 34 170-204 7-40 (140)
334 4e21_A 6-phosphogluconate dehy 69.6 3.3 0.00011 36.7 3.5 35 168-203 20-54 (358)
335 2vdc_G Glutamate synthase [NAD 69.5 4.7 0.00016 36.6 4.6 37 168-205 262-299 (456)
336 1p9o_A Phosphopantothenoylcyst 69.5 4 0.00014 35.9 4.0 39 167-205 33-90 (313)
337 2pff_A Fatty acid synthase sub 69.4 3.7 0.00013 43.7 4.3 39 165-203 471-510 (1688)
338 3brs_A Periplasmic binding pro 69.4 14 0.00048 29.8 7.2 67 41-108 5-74 (289)
339 3ef6_A Toluene 1,2-dioxygenase 69.2 11 0.00037 33.1 6.9 50 153-206 129-178 (410)
340 1dbq_A Purine repressor; trans 69.0 14 0.00048 29.8 7.1 67 39-108 5-72 (289)
341 4fk1_A Putative thioredoxin re 69.0 4.1 0.00014 33.9 3.9 41 165-205 141-181 (304)
342 3ors_A N5-carboxyaminoimidazol 68.8 22 0.00077 28.4 7.9 62 41-105 3-64 (163)
343 3gyb_A Transcriptional regulat 68.8 16 0.00055 29.3 7.4 61 40-104 4-65 (280)
344 4dqv_A Probable peptide synthe 68.6 4.5 0.00015 36.6 4.3 40 166-205 69-111 (478)
345 3lzw_A Ferredoxin--NADP reduct 68.6 4 0.00014 33.8 3.7 38 167-205 151-188 (332)
346 3trh_A Phosphoribosylaminoimid 68.6 19 0.00064 29.0 7.5 62 41-105 6-67 (169)
347 2q0l_A TRXR, thioredoxin reduc 68.5 4.7 0.00016 33.3 4.1 37 167-204 140-176 (311)
348 3itj_A Thioredoxin reductase 1 68.4 4.6 0.00016 33.4 4.1 38 167-205 170-207 (338)
349 4dup_A Quinone oxidoreductase; 68.0 4.6 0.00016 34.9 4.1 52 150-202 148-200 (353)
350 3hn7_A UDP-N-acetylmuramate-L- 67.1 6.3 0.00022 36.5 5.1 40 165-204 14-53 (524)
351 3h8v_A Ubiquitin-like modifier 67.0 2.9 0.0001 36.3 2.6 43 167-210 33-76 (292)
352 1fl2_A Alkyl hydroperoxide red 66.8 4.6 0.00016 33.3 3.7 36 168-204 142-177 (310)
353 3s2e_A Zinc-containing alcohol 66.6 11 0.00037 32.1 6.2 52 149-202 147-198 (340)
354 3m9w_A D-xylose-binding peripl 66.5 33 0.0011 28.0 9.1 65 42-109 3-68 (313)
355 2ebu_A Replication factor C su 66.5 12 0.00041 27.9 5.6 78 10-101 27-105 (112)
356 3rot_A ABC sugar transporter, 66.4 25 0.00085 28.6 8.2 64 42-106 4-68 (297)
357 2zbw_A Thioredoxin reductase; 66.0 5.3 0.00018 33.3 4.0 36 168-204 150-185 (335)
358 1trb_A Thioredoxin reductase; 65.4 5.9 0.0002 32.7 4.1 36 168-204 143-178 (320)
359 3rpe_A MDAB, modulator of drug 65.3 20 0.00069 29.5 7.3 62 42-109 26-93 (218)
360 3kd9_A Coenzyme A disulfide re 65.2 6 0.0002 35.1 4.4 51 153-205 132-182 (449)
361 2q7v_A Thioredoxin reductase; 65.1 6.2 0.00021 32.9 4.2 37 167-204 149-185 (325)
362 1o4v_A Phosphoribosylaminoimid 65.1 53 0.0018 26.7 9.6 62 41-105 13-74 (183)
363 4b4k_A N5-carboxyaminoimidazol 64.6 39 0.0013 27.4 8.7 63 41-106 22-84 (181)
364 2gag_A Heterotetrameric sarcos 64.5 5.1 0.00017 40.0 4.1 51 153-205 268-318 (965)
365 3l6u_A ABC-type sugar transpor 64.1 38 0.0013 27.2 8.8 67 39-108 6-73 (293)
366 3f8d_A Thioredoxin reductase ( 63.8 5.1 0.00018 32.8 3.4 38 167-205 151-188 (323)
367 3fni_A Putative diflavin flavo 63.7 46 0.0016 25.3 14.7 63 41-109 4-66 (159)
368 1tt7_A YHFP; alcohol dehydroge 63.6 7 0.00024 33.2 4.3 54 153-207 134-188 (330)
369 2a87_A TRXR, TR, thioredoxin r 63.6 6.8 0.00023 32.9 4.2 36 168-204 153-188 (335)
370 2jhf_A Alcohol dehydrogenase E 63.5 12 0.00043 32.3 6.0 53 149-203 171-225 (374)
371 3uox_A Otemo; baeyer-villiger 63.1 5.5 0.00019 37.0 3.8 38 166-204 181-218 (545)
372 1gu7_A Enoyl-[acyl-carrier-pro 62.9 7.1 0.00024 33.6 4.3 52 149-201 146-199 (364)
373 3ab1_A Ferredoxin--NADP reduct 62.8 6.4 0.00022 33.4 4.0 36 168-204 161-196 (360)
374 1cdo_A Alcohol dehydrogenase; 62.7 13 0.00045 32.1 6.0 53 149-203 172-226 (374)
375 1y81_A Conserved hypothetical 62.7 9.6 0.00033 28.9 4.6 36 168-203 12-50 (138)
376 1np3_A Ketol-acid reductoisome 62.5 4 0.00014 35.5 2.7 37 168-205 14-50 (338)
377 3iwt_A 178AA long hypothetical 62.5 24 0.00081 27.5 7.0 66 40-109 14-91 (178)
378 3abi_A Putative uncharacterize 62.4 5.1 0.00017 35.0 3.3 42 165-208 11-52 (365)
379 3iup_A Putative NADPH:quinone 62.3 3.4 0.00012 36.2 2.2 50 150-201 153-203 (379)
380 1f0y_A HCDH, L-3-hydroxyacyl-C 62.1 6.9 0.00024 33.0 4.0 36 171-207 16-51 (302)
381 4ap3_A Steroid monooxygenase; 62.0 4.5 0.00016 37.6 3.1 39 165-204 186-224 (549)
382 2vns_A Metalloreductase steap3 62.0 3.8 0.00013 33.0 2.3 34 169-203 27-60 (215)
383 3e61_A Putative transcriptiona 61.9 29 0.001 27.7 7.7 64 40-106 7-71 (277)
384 3r9u_A Thioredoxin reductase; 61.9 7.1 0.00024 31.9 4.0 38 166-204 143-180 (315)
385 3huu_A Transcription regulator 61.7 63 0.0022 26.2 10.2 65 39-106 20-90 (305)
386 3gqv_A Enoyl reductase; medium 61.7 10 0.00035 33.0 5.1 33 168-200 163-195 (371)
387 4eez_A Alcohol dehydrogenase 1 61.6 8.4 0.00029 32.8 4.5 53 149-202 144-196 (348)
388 4b63_A L-ornithine N5 monooxyg 61.6 5.6 0.00019 36.3 3.5 38 165-203 241-280 (501)
389 2qh8_A Uncharacterized protein 61.6 28 0.00096 28.7 7.7 66 40-106 7-76 (302)
390 2duw_A Putative COA-binding pr 61.3 6.1 0.00021 30.2 3.2 35 170-204 13-50 (145)
391 1e3i_A Alcohol dehydrogenase, 61.0 15 0.0005 31.9 6.0 52 149-202 175-228 (376)
392 4huj_A Uncharacterized protein 60.8 5.3 0.00018 32.2 2.9 34 171-205 24-57 (220)
393 3klj_A NAD(FAD)-dependent dehy 60.8 3.8 0.00013 36.1 2.2 36 169-205 145-180 (385)
394 2pjk_A 178AA long hypothetical 60.7 35 0.0012 27.0 7.8 89 39-133 13-114 (178)
395 1xa0_A Putative NADPH dependen 60.7 8.6 0.00029 32.6 4.4 54 153-207 133-187 (328)
396 3c3k_A Alanine racemase; struc 60.6 43 0.0015 27.0 8.6 65 39-106 6-71 (285)
397 2x7x_A Sensor protein; transfe 60.5 26 0.00088 29.1 7.3 65 39-106 4-69 (325)
398 2fep_A Catabolite control prot 60.5 31 0.001 28.0 7.7 66 39-107 14-80 (289)
399 3lp6_A Phosphoribosylaminoimid 60.4 38 0.0013 27.3 7.9 63 40-105 6-68 (174)
400 1y5e_A Molybdenum cofactor bio 60.4 50 0.0017 25.6 8.6 63 40-106 12-79 (169)
401 1ebd_A E3BD, dihydrolipoamide 60.2 11 0.00038 33.5 5.2 35 169-204 169-203 (455)
402 1o94_A Tmadh, trimethylamine d 60.0 8.2 0.00028 37.1 4.5 38 167-204 525-563 (729)
403 1q1r_A Putidaredoxin reductase 59.9 8.7 0.0003 34.1 4.4 36 169-205 148-183 (431)
404 2ywx_A Phosphoribosylaminoimid 59.9 53 0.0018 26.0 8.5 51 45-96 2-52 (157)
405 3g79_A NDP-N-acetyl-D-galactos 59.6 10 0.00035 35.0 4.9 35 170-205 18-54 (478)
406 3zen_D Fatty acid synthase; tr 59.6 8.7 0.0003 43.4 5.1 40 167-206 2133-2173(3089)
407 4a9w_A Monooxygenase; baeyer-v 59.4 8.4 0.00029 31.9 4.0 36 167-204 160-195 (357)
408 1u11_A PURE (N5-carboxyaminoim 59.3 41 0.0014 27.3 7.9 62 41-105 21-82 (182)
409 2bc0_A NADH oxidase; flavoprot 59.2 8.6 0.00029 34.7 4.3 37 168-205 192-228 (490)
410 3s5w_A L-ornithine 5-monooxyge 59.0 4.2 0.00014 36.0 2.2 35 169-204 226-262 (463)
411 3inp_A D-ribulose-phosphate 3- 58.9 5.5 0.00019 33.7 2.8 82 63-160 102-185 (246)
412 3l49_A ABC sugar (ribose) tran 58.9 33 0.0011 27.5 7.5 63 41-106 5-68 (291)
413 3lxd_A FAD-dependent pyridine 58.8 8.9 0.0003 33.6 4.2 50 153-205 137-186 (415)
414 3uug_A Multiple sugar-binding 58.7 33 0.0011 28.1 7.7 62 42-106 4-66 (330)
415 2fzw_A Alcohol dehydrogenase c 58.5 14 0.00046 32.0 5.3 52 149-202 170-223 (373)
416 3hs3_A Ribose operon repressor 57.9 48 0.0017 26.6 8.4 66 39-107 8-75 (277)
417 2uyg_A 3-dehydroquinate dehydr 57.9 26 0.00091 27.6 6.4 59 57-124 28-88 (149)
418 4e4t_A Phosphoribosylaminoimid 57.9 13 0.00046 33.1 5.3 36 167-203 32-67 (419)
419 3ic9_A Dihydrolipoamide dehydr 57.9 12 0.00042 33.8 5.1 39 166-205 170-208 (492)
420 2a8x_A Dihydrolipoyl dehydroge 57.9 13 0.00045 33.0 5.3 35 169-204 170-204 (464)
421 2eq6_A Pyruvate dehydrogenase 57.7 9.4 0.00032 34.2 4.3 35 169-204 168-202 (464)
422 3lwz_A 3-dehydroquinate dehydr 57.5 25 0.00085 27.9 6.2 56 59-124 38-95 (153)
423 1p0f_A NADP-dependent alcohol 57.5 14 0.00049 31.9 5.3 33 169-202 191-224 (373)
424 2f00_A UDP-N-acetylmuramate--L 57.4 14 0.00048 33.6 5.5 36 170-206 19-55 (491)
425 3ihm_A Styrene monooxygenase A 57.4 6.6 0.00022 34.8 3.2 34 170-204 22-55 (430)
426 1gqo_A Dehydroquinase; dehydra 57.0 26 0.00089 27.4 6.2 58 58-125 30-89 (143)
427 2v3a_A Rubredoxin reductase; a 57.0 9.8 0.00033 32.9 4.2 35 169-204 144-178 (384)
428 3vh1_A Ubiquitin-like modifier 56.8 3.4 0.00012 39.5 1.2 42 167-209 324-366 (598)
429 3lft_A Uncharacterized protein 56.8 76 0.0026 25.8 9.5 58 43-105 135-192 (295)
430 1v59_A Dihydrolipoamide dehydr 56.7 13 0.00046 33.1 5.1 36 169-205 182-217 (478)
431 2k6g_A Replication factor C su 56.7 28 0.00097 25.6 6.1 70 10-93 37-107 (109)
432 3h5n_A MCCB protein; ubiquitin 56.6 4.7 0.00016 35.6 2.0 44 168-212 116-160 (353)
433 3goh_A Alcohol dehydrogenase, 56.3 12 0.00041 31.5 4.5 50 150-201 124-173 (315)
434 4a0s_A Octenoyl-COA reductase/ 56.2 8.9 0.0003 34.2 3.8 35 168-202 219-253 (447)
435 3tqh_A Quinone oxidoreductase; 56.1 12 0.00042 31.6 4.6 52 149-201 133-184 (321)
436 1uqr_A 3-dehydroquinate dehydr 56.1 26 0.00091 27.7 6.1 49 58-116 31-79 (154)
437 1xhc_A NADH oxidase /nitrite r 55.7 7.2 0.00025 33.9 3.1 36 169-205 142-177 (367)
438 2fqx_A Membrane lipoprotein TM 55.6 49 0.0017 27.7 8.3 64 41-108 4-71 (318)
439 1iuk_A Hypothetical protein TT 55.5 13 0.00044 28.2 4.2 34 170-203 13-49 (140)
440 3fg2_P Putative rubredoxin red 55.4 10 0.00036 33.0 4.1 49 153-205 128-176 (404)
441 2uyy_A N-PAC protein; long-cha 55.2 9.5 0.00033 32.1 3.7 37 171-208 31-67 (316)
442 3cty_A Thioredoxin reductase; 54.8 9 0.00031 31.8 3.4 36 168-204 153-188 (319)
443 3f2v_A General stress protein 54.7 12 0.00042 30.1 4.1 64 43-109 3-68 (192)
444 1lvl_A Dihydrolipoamide dehydr 54.6 12 0.00041 33.4 4.4 37 168-205 169-205 (458)
445 2yqu_A 2-oxoglutarate dehydrog 54.5 15 0.00053 32.5 5.1 36 168-204 165-200 (455)
446 3bbl_A Regulatory protein of L 54.4 21 0.00072 28.9 5.6 65 41-108 4-73 (287)
447 1w4x_A Phenylacetone monooxyge 54.3 7.4 0.00025 35.7 3.1 36 166-202 182-217 (542)
448 1lqt_A FPRA; NADP+ derivative, 54.0 12 0.0004 33.8 4.3 38 167-205 144-202 (456)
449 3rjz_A N-type ATP pyrophosphat 54.0 28 0.00096 29.1 6.4 56 39-94 28-89 (237)
450 2xij_A Methylmalonyl-COA mutas 53.9 41 0.0014 33.0 8.3 72 22-97 586-657 (762)
451 3eod_A Protein HNR; response r 53.8 14 0.00048 25.8 3.9 36 167-202 4-39 (130)
452 1req_A Methylmalonyl-COA mutas 53.6 38 0.0013 33.1 8.0 71 23-97 579-649 (727)
453 2x8g_A Thioredoxin glutathione 53.5 11 0.00038 34.8 4.2 38 165-203 281-318 (598)
454 3fpc_A NADP-dependent alcohol 53.3 21 0.0007 30.6 5.6 53 149-203 147-200 (352)
455 2zyd_A 6-phosphogluconate dehy 53.2 6 0.00021 36.3 2.2 36 167-203 12-47 (480)
456 1nhp_A NADH peroxidase; oxidor 53.2 13 0.00043 33.0 4.3 50 153-204 133-182 (447)
457 3egc_A Putative ribose operon 53.0 86 0.003 25.1 10.9 67 39-108 6-73 (291)
458 3lad_A Dihydrolipoamide dehydr 52.9 16 0.00054 32.6 4.9 38 166-204 176-213 (476)
459 1zk7_A HGII, reductase, mercur 52.9 12 0.00043 33.2 4.2 36 169-205 175-210 (467)
460 3lkv_A Uncharacterized conserv 52.8 86 0.0029 26.0 9.4 59 42-105 141-199 (302)
461 1onf_A GR, grase, glutathione 52.7 12 0.00041 33.9 4.2 34 170-204 176-209 (500)
462 4eqs_A Coenzyme A disulfide re 52.7 9.5 0.00033 34.0 3.4 36 169-205 146-181 (437)
463 1p3d_A UDP-N-acetylmuramate--a 52.6 13 0.00046 33.6 4.4 36 170-206 18-54 (475)
464 2d8a_A PH0655, probable L-thre 52.6 10 0.00035 32.5 3.5 39 161-202 161-200 (348)
465 3ntd_A FAD-dependent pyridine 52.4 11 0.00038 34.3 3.9 37 168-205 149-185 (565)
466 3d8u_A PURR transcriptional re 52.3 39 0.0013 26.8 6.9 64 42-108 4-68 (275)
467 8abp_A L-arabinose-binding pro 52.0 50 0.0017 26.6 7.6 61 42-106 3-64 (306)
468 1zmd_A Dihydrolipoyl dehydroge 52.0 18 0.00061 32.3 5.1 36 169-205 177-212 (474)
469 2cdc_A Glucose dehydrogenase g 51.9 9 0.00031 33.1 3.1 34 170-204 181-214 (366)
470 3fr7_A Putative ketol-acid red 51.7 14 0.00048 34.8 4.5 35 168-203 51-92 (525)
471 3urh_A Dihydrolipoyl dehydroge 51.6 15 0.00051 33.0 4.6 38 166-204 194-231 (491)
472 1hyu_A AHPF, alkyl hydroperoxi 51.4 8.4 0.00029 35.3 2.9 36 168-204 353-388 (521)
473 2pv7_A T-protein [includes: ch 51.4 18 0.00061 30.5 4.8 44 170-213 21-65 (298)
474 4gx0_A TRKA domain protein; me 51.3 9.8 0.00033 35.0 3.4 56 148-204 326-381 (565)
475 1dxl_A Dihydrolipoamide dehydr 51.1 14 0.00046 32.9 4.2 36 169-205 176-211 (470)
476 2yjz_A Metalloreductase steap4 56.4 3.2 0.00011 33.5 0.0 35 168-203 17-51 (201)
477 3rp8_A Flavoprotein monooxygen 51.0 13 0.00045 32.1 4.0 35 169-204 22-56 (407)
478 2dri_A D-ribose-binding protei 50.9 59 0.002 25.9 7.8 61 43-106 3-64 (271)
479 1byk_A Protein (trehalose oper 50.8 80 0.0027 24.7 8.5 62 43-107 4-66 (255)
480 1mkz_A Molybdenum cofactor bio 50.6 74 0.0025 24.8 8.1 64 39-106 8-76 (172)
481 3p45_A Caspase-6; protease, hu 50.5 52 0.0018 26.4 7.2 55 41-98 43-107 (179)
482 1zcj_A Peroxisomal bifunctiona 50.4 12 0.0004 34.1 3.7 32 171-203 38-69 (463)
483 3loq_A Universal stress protei 50.4 97 0.0033 25.1 9.2 77 13-97 177-253 (294)
484 2qae_A Lipoamide, dihydrolipoy 50.2 20 0.00067 31.9 5.1 36 169-205 173-208 (468)
485 2r9z_A Glutathione amide reduc 49.8 14 0.00048 33.0 4.1 36 169-205 165-200 (463)
486 1ivn_A Thioesterase I; hydrola 49.8 79 0.0027 23.6 8.8 92 41-144 62-167 (190)
487 2rjo_A Twin-arginine transloca 49.7 47 0.0016 27.5 7.2 65 40-106 4-70 (332)
488 3kke_A LACI family transcripti 49.6 1E+02 0.0035 24.9 11.0 65 40-107 14-79 (303)
489 1evy_A Glycerol-3-phosphate de 49.5 6.6 0.00022 34.0 1.8 31 172-203 17-47 (366)
490 1h2b_A Alcohol dehydrogenase; 49.5 22 0.00074 30.6 5.2 51 150-202 166-219 (359)
491 1gud_A ALBP, D-allose-binding 49.4 79 0.0027 25.4 8.4 50 56-106 17-66 (288)
492 3k30_A Histamine dehydrogenase 49.4 16 0.00053 34.7 4.5 39 167-205 520-559 (690)
493 3tem_A Ribosyldihydronicotinam 49.0 43 0.0015 27.3 6.7 64 43-109 3-102 (228)
494 2cdu_A NADPH oxidase; flavoenz 49.0 14 0.00048 32.7 3.9 36 169-205 148-183 (452)
495 2qh8_A Uncharacterized protein 48.9 97 0.0033 25.3 9.0 58 43-105 142-199 (302)
496 1ojt_A Surface protein; redox- 48.7 16 0.00056 32.7 4.4 36 169-205 184-219 (482)
497 4dvj_A Putative zinc-dependent 48.7 14 0.00046 32.1 3.7 55 149-203 146-206 (363)
498 3qsg_A NAD-binding phosphogluc 48.6 11 0.00036 32.2 2.9 33 170-203 24-57 (312)
499 3ggo_A Prephenate dehydrogenas 48.6 12 0.00041 32.1 3.3 34 169-203 32-67 (314)
500 3dk9_A Grase, GR, glutathione 48.5 21 0.00073 31.8 5.1 36 168-204 185-220 (478)
No 1
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=100.00 E-value=3.5e-76 Score=524.15 Aligned_cols=203 Identities=40% Similarity=0.686 Sum_probs=197.6
Q ss_pred hhhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHH
Q psy7981 8 QQAQILSGTAVSGDIREGLKERVKKLKERLPDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIEL 87 (216)
Q Consensus 8 ~~a~il~Gk~vA~~i~~~ik~~v~~l~~~~~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el 87 (216)
.||+|||||++|++|+++++++++.|+++ .|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||
T Consensus 21 ~Ma~ildGk~iA~~i~~~l~~~v~~l~~~-~g~~P~LavIlVG~dpaS~~Yv~~K~k~c~~vGi~s~~~~lp~~~se~el 99 (303)
T 4b4u_A 21 HMALVLDGRALAKQIEENLLVRVEALKAK-TGRTPILATILVGDDGASATYVRMKGNACRRVGMDSLKIELPQETTTEQL 99 (303)
T ss_dssp -CCEECCHHHHHHHHHHHHHHHHHHHHHH-HSCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHH
T ss_pred CCCEEeehHHHHHHHHHHHHHHHHHHHHc-CCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEecCccCCHHHH
Confidence 47999999999999999999999999864 48999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHHHHHHHHHhCCC
Q psy7981 88 LSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNGVLELIKRTNVT 167 (216)
Q Consensus 88 ~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~av~~lL~~~~i~ 167 (216)
++.|++||+|++|||||||+|| |+|+|+++++++|+|+||||||||+|+|+|+.|. ..|+||||+||++||++|+++
T Consensus 100 l~~I~~LN~D~~V~GIlVQlPL--P~hid~~~i~~~I~p~KDVDG~hp~N~G~L~~g~-~~~~PcTp~gv~~lL~~~~i~ 176 (303)
T 4b4u_A 100 LAEIEKLNANPDVHGILLQHPV--PAQIDERACFDAISLAKDVDGVTCLGFGRMAMGE-AAYGSATPAGIMTILKENNIE 176 (303)
T ss_dssp HHHHHHHHTCTTCCEEEECSSC--CTTSCHHHHHHHSCGGGCTTCCCHHHHHHHHTTC-CCCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhcCCCCccEEEEeCCC--ccccChHHHHhccCcccccCccCcchHHHhcCCC-CcccCccHHHHHHHHHHHCCC
Confidence 9999999999999999999999 9999999999999999999999999999999994 499999999999999999999
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHHHHhcC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQDVVKSP 214 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~~~k~a 214 (216)
++||+|||||||++||+|+|+||+++|||||+|||+|+||++++++|
T Consensus 177 l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T~dl~~~~~~A 223 (303)
T 4b4u_A 177 IAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRTQNLPELVKQA 223 (303)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHHTC
T ss_pred CCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCCCCHHHHhhcC
Confidence 99999999999999999999999999999999999999999999998
No 2
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=100.00 E-value=3.3e-71 Score=490.01 Aligned_cols=203 Identities=36% Similarity=0.603 Sum_probs=196.6
Q ss_pred hhhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHH
Q psy7981 8 QQAQILSGTAVSGDIREGLKERVKKLKERLPDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIEL 87 (216)
Q Consensus 8 ~~a~il~Gk~vA~~i~~~ik~~v~~l~~~~~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el 87 (216)
||+++||||++|++|++++++++++|+++ ++++|+|++|+||+||+|.+|+++|.|+|+++||+++.++||+++||+||
T Consensus 1 ~ma~iidGk~ia~~i~~~~~~~v~~l~~~-~~~~P~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~el 79 (288)
T 1b0a_A 1 MAAKIIDGKTIAQQVRSEVAQKVQARIAA-GLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAEL 79 (288)
T ss_dssp -CCEECCHHHHHHHHHHHHHHHHHHHHHT-TCCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEECCEEECTTCCHHHH
T ss_pred CCCeEecHHHHHHHHHHHHHHHHHHHHhc-CCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHH
Confidence 67889999999999999999999999865 34789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHHHHHHHHHhCCC
Q psy7981 88 LSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNGVLELIKRTNVT 167 (216)
Q Consensus 88 ~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~av~~lL~~~~i~ 167 (216)
++.|++||+|++|||||||+|| |+|+|++.++++|+|+||||||||+|+|+|+.|. .+|+||||.||+++|++|+++
T Consensus 80 l~~I~~lN~D~~V~GIlvqlPL--P~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g~-~~~~PcTp~gi~~ll~~~~i~ 156 (288)
T 1b0a_A 80 LELIDTLNADNTIDGILVQLPL--PAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRA-PRLRPCTPRGIVTLLERYNID 156 (288)
T ss_dssp HHHHHHHHTCTTCCEEEECSSC--CTTSCHHHHHTTSCTTTCTTCCSHHHHHHHHTTC-CSSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhcCCCCCcEEEEeCCC--CCCCCHHHHHhccCCccCcccCCccchhHHhCCC-CCCCCCcHHHHHHHHHHcCCC
Confidence 9999999999999999999999 9999999999999999999999999999999994 499999999999999999999
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHHHHhcC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQDVVKSP 214 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~~~k~a 214 (216)
++||+|+|||||++||+|+|+||+++|||||+|||+|+||++++++|
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~A 203 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENA 203 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHHHC
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHhccC
Confidence 99999999999999999999999999999999999999999999987
No 3
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=100.00 E-value=2.8e-70 Score=483.62 Aligned_cols=204 Identities=36% Similarity=0.620 Sum_probs=196.8
Q ss_pred hhhhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHH
Q psy7981 7 QQQAQILSGTAVSGDIREGLKERVKKLKERLPDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIE 86 (216)
Q Consensus 7 ~~~a~il~Gk~vA~~i~~~ik~~v~~l~~~~~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~e 86 (216)
+|+|++||||++|++|++++++++++|+++ ++++|+|++|+||+||+|.+|+++|.|+|+++||+++.++||++++|+|
T Consensus 2 ~m~a~iidGk~ia~~i~~~~~~~v~~l~~~-~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~e 80 (286)
T 4a5o_A 2 HMTAQLIDGKAIAANLRQQIAQRVTERRQQ-GLRVPGLAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDD 80 (286)
T ss_dssp --CCEECCHHHHHHHHHHHHHHHHHHHHHT-TCCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHH
T ss_pred CcccEEeeHHHHHHHHHHHHHHHHHHHHhc-CCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHH
Confidence 366789999999999999999999999864 4688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHHHHHHHHHhCC
Q psy7981 87 LLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNGVLELIKRTNV 166 (216)
Q Consensus 87 l~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~av~~lL~~~~i 166 (216)
|++.|++||+|++|||||||+|| |+|+|+++++++|+|+||||||||+|+|+|+.|. ..|+||||+||+++|++|++
T Consensus 81 ll~~I~~lN~d~~v~GIlVqlPL--P~~id~~~v~~~I~p~KDVDG~~~~N~g~l~~g~-~~~~PcTp~gv~~lL~~~~i 157 (286)
T 4a5o_A 81 LLALIDRLNDDPAIDGILVQLPL--PAHLDASLLLERIHPDKDVDGFHPYNIGRLAQRM-PLLRPCTPKGIMTLLASTGA 157 (286)
T ss_dssp HHHHHHHHHTCTTCCEEEECSSC--CTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHTTC-CSSCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCEEEEcCCC--CCCcCHHHHHhhCCcccccccCChhhhHHHhcCC-CCCCCCCHHHHHHHHHHhCC
Confidence 99999999999999999999999 9999999999999999999999999999999994 49999999999999999999
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHHHHhcC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQDVVKSP 214 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~~~k~a 214 (216)
+++||+|+|||||.+||+|+|++|+++|||||+|||+|+||++++++|
T Consensus 158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~~~~~A 205 (286)
T 4a5o_A 158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVSRA 205 (286)
T ss_dssp CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHHTC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHHHhccC
Confidence 999999999999999999999999999999999999999999999987
No 4
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=100.00 E-value=2.2e-70 Score=487.28 Aligned_cols=205 Identities=57% Similarity=0.949 Sum_probs=197.2
Q ss_pred hhhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHH
Q psy7981 8 QQAQILSGTAVSGDIREGLKERVKKLKERLPDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIEL 87 (216)
Q Consensus 8 ~~a~il~Gk~vA~~i~~~ik~~v~~l~~~~~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el 87 (216)
|++++||||.+|++|+++++++++.|+++..+++|+||+|+||+||+|.+|+++|.|+|+++||+++.++||+++||+||
T Consensus 2 m~a~iidGk~ia~~i~~~~~~~v~~l~~~~~~~~P~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~el 81 (301)
T 1a4i_A 2 APAEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEV 81 (301)
T ss_dssp CCCEECCHHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHH
T ss_pred CCCEEeeHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHH
Confidence 45789999999999999999999999876324789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCccEEEEeCCCCCCCC--CCHHHHhhhcCCCCCcccCCccchhHhhcCCCC-CcccCCHHHHHHHHHHh
Q psy7981 88 LSRLKKLNEDPSVHGIIVQMPLDSDND--INAMLVTDSVSPEKDVDGLNTINEGRVAIGDMN-GFIPCTPNGVLELIKRT 164 (216)
Q Consensus 88 ~~~I~~lN~D~~V~GIlvqlPL~~P~~--id~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~-~~~PcTa~av~~lL~~~ 164 (216)
++.|++||+|++|||||||+|| |+| +|++.++++|+|+||||||||+|+|+|+.|... +|+||||+||+++|++|
T Consensus 82 l~~I~~lN~D~~V~GIlvqlPL--P~~~~id~~~i~~~I~p~KDVDG~hp~N~G~l~~g~~~~~~~PcTp~gi~~ll~~~ 159 (301)
T 1a4i_A 82 MKYITSLNEDSTVHGFLVQLPL--DSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKET 159 (301)
T ss_dssp HHHHHHHHHCTTCCEEEECSSC--CCSSCCCHHHHHHTSCGGGBTTCCSHHHHHHHHTTCCSSCCCCHHHHHHHHHHHTT
T ss_pred HHHHHHhcCCCCCcEEEEeccC--CCCCccCHHHHHhccCCCCCccCCChhhHHHHhcCCCCCCccCchHHHHHHHHHHc
Confidence 9999999999999999999999 999 999999999999999999999999999998533 89999999999999999
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHHHHhcC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQDVVKSP 214 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~~~k~a 214 (216)
++++.||+|+|||||++||+|+|++|+++|||||+|||+|+||++++++|
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~A 209 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKG 209 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHTTC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHHHhccC
Confidence 99999999999999999999999999999999999999999999999987
No 5
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=100.00 E-value=1e-69 Score=479.03 Aligned_cols=200 Identities=36% Similarity=0.650 Sum_probs=195.1
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHH
Q psy7981 10 AQILSGTAVSGDIREGLKERVKKLKERLPDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLS 89 (216)
Q Consensus 10 a~il~Gk~vA~~i~~~ik~~v~~l~~~~~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 89 (216)
+++||||++|++|++++++++++|+++ |++|+|++|+||+||+|.+|+++|.|+|+++||+++.++||+++||+||++
T Consensus 3 a~iidGk~ia~~i~~~~~~~v~~l~~~--g~~P~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~ 80 (281)
T 2c2x_A 3 AIMLDGKATRDEIFGDLKQRVAALDAA--GRTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNE 80 (281)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHT--TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHH
T ss_pred CEEeeHHHHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCCChhhHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 578999999999999999999999865 688999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHHHHHHHHHhCCCCC
Q psy7981 90 RLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNGVLELIKRTNVTIA 169 (216)
Q Consensus 90 ~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~ 169 (216)
.|++||+|++|||||||+|| |+|+|++.++++|+|+||||||||+|+|+|+.|. .+|+||||.||+++|++|+++++
T Consensus 81 ~i~~lN~D~~v~GIlvqlPl--P~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g~-~~~~PcTp~gi~~ll~~~~i~l~ 157 (281)
T 2c2x_A 81 TIDELNANPDCTGYIVQLPL--PKHLDENAALERVDPAKDADGLHPTNLGRLVLGT-PAPLPCTPRGIVHLLRRYDISIA 157 (281)
T ss_dssp HHHHHHHCTTCCEEEECSCC--CTTSCHHHHHHHSCGGGBTTSCCHHHHHHHHHTC-CCCCCHHHHHHHHHHHHTTCCCT
T ss_pred HHHHhcCCCCCCEEEEeCCC--CCCCCHHHHHhhcCccCCccCCChhhHHHHhCCC-CCCCCChHHHHHHHHHHcCCCCC
Confidence 99999999999999999999 9999999999999999999999999999999994 49999999999999999999999
Q ss_pred CCeEEEecCCCcccHHHHHHhhhC--CCEEEEecCCCCChHHHHhcC
Q psy7981 170 GTNAVVLGRSKIVGTPAAELLKWK--HATVTVCHSKTKNIQDVVKSP 214 (216)
Q Consensus 170 Gk~vvViGrS~~VG~Pla~lL~~~--~ATVtichs~T~~l~~~~k~a 214 (216)
||+|+|||||++||+|++++|+++ |||||+|||+|+||.+++++|
T Consensus 158 gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~~~~~~A 204 (281)
T 2c2x_A 158 GAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPALTRQA 204 (281)
T ss_dssp TCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHHHHHTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHHHHHhhC
Confidence 999999999999999999999999 999999999999999999987
No 6
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=100.00 E-value=2.2e-69 Score=480.86 Aligned_cols=205 Identities=42% Similarity=0.670 Sum_probs=197.0
Q ss_pred hhhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHH
Q psy7981 8 QQAQILSGTAVSGDIREGLKERVKKLKERLPDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIEL 87 (216)
Q Consensus 8 ~~a~il~Gk~vA~~i~~~ik~~v~~l~~~~~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el 87 (216)
+||++||||++|++|++++++++++|+++.++++|+|++|+||+||+|.+|+++|.|+|+++||+++.++||++++|+||
T Consensus 4 ~ma~iidGk~ia~~i~~~~~~~v~~l~~~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~el 83 (300)
T 4a26_A 4 PSAQIIDGKAIAAAIRSELKDKVAALRELYGGRVPGLASIIVGQRMDSKKYVQLKHKAAAEVGMASFNVELPEDISQEVL 83 (300)
T ss_dssp -CCEECCHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHH
T ss_pred cccEEeehHHHHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHH
Confidence 45889999999999999999999999875433899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCCccchhHhhcCCC-CCcccCCHHHHHHHHHHhCC
Q psy7981 88 LSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLNTINEGRVAIGDM-NGFIPCTPNGVLELIKRTNV 166 (216)
Q Consensus 88 ~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~-~~~~PcTa~av~~lL~~~~i 166 (216)
++.|++||+|++|||||||+|| |+|+|++.++++|+|+||||||||+|+|+|+.|.. .+|+||||+||+++|++|++
T Consensus 84 l~~I~~lN~d~~v~GIlVqlPL--P~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~~PcTp~gv~~lL~~~~i 161 (300)
T 4a26_A 84 EVNVEKLNNDPNCHGIIVQLPL--PKHLNENRAIEKIHPHKDADALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCGI 161 (300)
T ss_dssp HHHHHHHHTCTTCCEEEECSCC--CTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHCTTCCCSCCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHhcCCCCCCEEEEcCCC--CCCCCHHHHHhhCCcccccccCCcceEEEeecCCCcCCCCCCCHHHHHHHHHHcCC
Confidence 9999999999999999999999 99999999999999999999999999999999852 48999999999999999999
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH--HHHhcC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ--DVVKSP 214 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~--~~~k~a 214 (216)
+++||+|+|||||.+||+|++.+|+++|||||+||++|++|+ +++++|
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~l~~~~~~A 211 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDMIDYLRTA 211 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHHHHHHHHTC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhhccC
Confidence 999999999999999999999999999999999999999999 999987
No 7
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3.6e-69 Score=476.60 Aligned_cols=201 Identities=41% Similarity=0.673 Sum_probs=195.0
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHH
Q psy7981 9 QAQILSGTAVSGDIREGLKERVKKLKERLPDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELL 88 (216)
Q Consensus 9 ~a~il~Gk~vA~~i~~~ik~~v~~l~~~~~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 88 (216)
++++||||++|++|++++++++++|+++ |.+|+|++|+||+||+|.+|+++|.|+|+++||+++.++||++++|+||+
T Consensus 3 ~~~iidGk~~a~~i~~~~~~~v~~l~~~--~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell 80 (285)
T 3p2o_A 3 AMTLLDGKALSAKIKEELKEKNQFLKSK--GIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENITQNELL 80 (285)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHTT--TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHH
T ss_pred CCEEeehHHHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHH
Confidence 4578999999999999999999999854 56999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCCccchhHhhcCCCCC-cccCCHHHHHHHHHHhCCC
Q psy7981 89 SRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLNTINEGRVAIGDMNG-FIPCTPNGVLELIKRTNVT 167 (216)
Q Consensus 89 ~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~-~~PcTa~av~~lL~~~~i~ 167 (216)
+.|++||+|++|||||||+|| |+|+|+++++++|+|+||||||||+|+|+|+.|. .. |+||||+||+++|++|+++
T Consensus 81 ~~I~~lN~d~~v~GIlvqlPl--p~~id~~~v~~~I~p~KDVDg~~~~N~g~l~~g~-~~g~~PcTp~gv~~lL~~~~i~ 157 (285)
T 3p2o_A 81 ALINTLNHDDSVHGILVQLPL--PDHICKDLILESIISSKDVDGFHPINVGYLNLGL-ESGFLPCTPLGVMKLLKAYEID 157 (285)
T ss_dssp HHHHHHHHCTTCCEEEECSCC--CTTSCHHHHHHHSCGGGCTTCCSHHHHHHHHTTC-CSSCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhCCCCCCEEEecCCC--CCCcCHHHHHhhCCcccccccCCHhhhhhhhcCC-CCCCCCCCHHHHHHHHHHhCCC
Confidence 999999999999999999999 9999999999999999999999999999999994 45 9999999999999999999
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHHHHhcC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQDVVKSP 214 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~~~k~a 214 (216)
++||+|+|||||.+||+|+|++|+++|||||+|||+|++|++++++|
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~~~~~A 204 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQA 204 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHTTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHHHhhcC
Confidence 99999999999999999999999999999999999999999999987
No 8
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=100.00 E-value=1.6e-68 Score=472.38 Aligned_cols=202 Identities=37% Similarity=0.630 Sum_probs=195.6
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHH
Q psy7981 10 AQILSGTAVSGDIREGLKERVKKLKERLPDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLS 89 (216)
Q Consensus 10 a~il~Gk~vA~~i~~~ik~~v~~l~~~~~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 89 (216)
+++||||++|++|++++++++++|+++ ++++|+|++|+||+||+|.+|+++|.|+|+++||+++.++||++++|+||++
T Consensus 4 ~~ildGk~ia~~i~~~~~~~v~~l~~~-~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~ 82 (285)
T 3l07_A 4 MILIDGKSLSKDLKERLATQVQEYKHH-TAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLE 82 (285)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHH-HCCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHH
T ss_pred CEEeehHHHHHHHHHHHHHHHHHHHhc-CCCCceEEEEEECCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHH
Confidence 468999999999999999999999865 3689999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHHHHHHHHHhCCCCC
Q psy7981 90 RLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNGVLELIKRTNVTIA 169 (216)
Q Consensus 90 ~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~ 169 (216)
.|++||+|++|||||||+|| |+|+|++.++++|+|+||||||||+|+|+|+.|....|+||||+||+++|++|+++++
T Consensus 83 ~I~~lN~d~~v~GIlvqlPl--p~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~PcTp~gv~~lL~~~~i~l~ 160 (285)
T 3l07_A 83 LIDQLNNDSSVHAILVQLPL--PAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTE 160 (285)
T ss_dssp HHHHHHTCTTCCEEEECSSC--CTTSCHHHHHHHSCGGGBTTCCSHHHHHHHHHTCTTCCCCHHHHHHHHHHHHTTCCCT
T ss_pred HHHHHhCCCCCcEEEEcCCC--CCCcCHHHHHhhCCcccccccCChhheeehhcCCCCCCCCCCHHHHHHHHHHhCCCCC
Confidence 99999999999999999999 9999999999999999999999999999999994248999999999999999999999
Q ss_pred CCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHHHHhcC
Q psy7981 170 GTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQDVVKSP 214 (216)
Q Consensus 170 Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~~~k~a 214 (216)
||+|+|||||.+||+|++++|+++|||||+|||+|++|++++++|
T Consensus 161 Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~A 205 (285)
T 3l07_A 161 GAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKA 205 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHTTC
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHhcccC
Confidence 999999999999999999999999999999999999999999987
No 9
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=100.00 E-value=3.5e-68 Score=468.22 Aligned_cols=193 Identities=31% Similarity=0.575 Sum_probs=188.7
Q ss_pred hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHH
Q psy7981 11 QILSGTAVSGDIREGLKERVKKLKERLPDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSR 90 (216)
Q Consensus 11 ~il~Gk~vA~~i~~~ik~~v~~l~~~~~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 90 (216)
++||||++|++|++++++++++| |++|+|++|+||+||+|.+|+++|.|+|+++|| ++.++||+++||+||++.
T Consensus 2 ~ildGk~~a~~i~~~~~~~v~~l-----~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi-~~~~~lp~~~s~~ell~~ 75 (276)
T 3ngx_A 2 KILRGEEIAEKKAENLHGIIERS-----GLEPSLKLIQIGDNEAASIYARAKIRRGKKIGI-AVDLEKYDDISMKDLLKR 75 (276)
T ss_dssp CBCCCHHHHHHHHHHHHHHHHHT-----TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTC-EEEEEEESSCCHHHHHHH
T ss_pred EEeeHHHHHHHHHHHHHHHHHHh-----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHCCe-EEEEECCCCCCHHHHHHH
Confidence 47999999999999999999988 689999999999999999999999999999999 999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHHHHHHHHHhCCCCCC
Q psy7981 91 LKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNGVLELIKRTNVTIAG 170 (216)
Q Consensus 91 I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~G 170 (216)
|++||+|++|||||||+|| |+|+|++.++++|+|+||||||||+|+|+|+.|. ..|+||||+||+++|++|+ ++|
T Consensus 76 I~~lN~D~~v~GIlvqlPL--P~~id~~~v~~~I~p~KDVDG~~p~n~G~l~~g~-~~~~PcTp~gv~~lL~~~~--l~G 150 (276)
T 3ngx_A 76 IDDLAKDPQINGIMIENPL--PKGFDYYEIVRNIPYYKDVDALSPYNQGLIALNR-EFLVPATPRAVIDIMDYYG--YHE 150 (276)
T ss_dssp HHHHHHCTTCCEEEECSCC--CTTCCHHHHHTTSCGGGBTTCCSHHHHHHHHTTC-CSSCCHHHHHHHHHHHHHT--CCS
T ss_pred HHHHcCCCCCcEEEEeCCC--CCCCCHHHHHhhCCCCCcccCCCccchhhhhcCC-CCCCCCcHHHHHHHHHHhC--cCC
Confidence 9999999999999999999 9999999999999999999999999999999994 4999999999999999999 999
Q ss_pred CeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHHHHhcC
Q psy7981 171 TNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQDVVKSP 214 (216)
Q Consensus 171 k~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~~~k~a 214 (216)
|+|+|||||++||+|+|.+|+++|||||+|||+|++|++++++|
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~~~~A 194 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMTRSS 194 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHHHS
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHhhccC
Confidence 99999999999999999999999999999999999999999987
No 10
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=100.00 E-value=2.4e-62 Score=439.58 Aligned_cols=202 Identities=22% Similarity=0.320 Sum_probs=190.0
Q ss_pred hhhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHH
Q psy7981 8 QQAQILSGTAVSGDIREGLKERVKKLKERLPDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIEL 87 (216)
Q Consensus 8 ~~a~il~Gk~vA~~i~~~ik~~v~~l~~~~~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el 87 (216)
|++++|||+++|+.|+++++++++.|+++..+++|+|++|+||+||+|.+|+++|.|+|+++||+++.++||++ +||
T Consensus 3 ~~~~~idgk~ia~~i~~~~~~~v~~l~~~~~~~~P~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~~~~l~~~---~~l 79 (320)
T 1edz_A 3 KPGRTILASKVAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSESMGFRYDLRVIEDK---DFL 79 (320)
T ss_dssp CCCEECCHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECCCCHHHHHHHHHHHHHHHHHTCEEEEEECSSG---GGH
T ss_pred CCCEEeeHHHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEEECCchhHHHHHHHHHHHHHHcCCEEEEEECCCh---HHH
Confidence 56889999999999999999999999876222789999999999999999999999999999999999999986 779
Q ss_pred HHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCCccchhHhhcCCC--------CCcccCCHHHHHH
Q psy7981 88 LSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLNTINEGRVAIGDM--------NGFIPCTPNGVLE 159 (216)
Q Consensus 88 ~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~--------~~~~PcTa~av~~ 159 (216)
++.|++||+|++|||||||+|| |+|+|++.++++|+|+||||||||.|+|+|+.|.. .+|+||||.|+++
T Consensus 80 ~~~i~~lN~d~~v~GIlvqlPl--p~~~~~~~i~~~I~p~KDVDG~~~~n~g~l~~~~~~l~~~~~~~~~~PcTp~a~v~ 157 (320)
T 1edz_A 80 EEAIIQANGDDSVNGIMVYFPV--FGNAQDQYLQQVVCKEKDVEGLNHVYYQNLYHNVRYLDKENRLKSILPCTPLAIVK 157 (320)
T ss_dssp HHHHHHHHHCTTCCEEEECSCS--SSSHHHHHHTTTSCTTTBTTCCSHHHHHHHHTTCCBSSSSSCSBCCCCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCEEEEeCCC--CCCCCHHHHHhccCcccccCcCChhhhHHHhcCCccccccccCCCcCCCcHHHHHH
Confidence 9999999999999999999999 99999999999999999999999999999998831 2799999999999
Q ss_pred HHHH---------hCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEe------------------cCC-----C--C
Q psy7981 160 LIKR---------TNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVC------------------HSK-----T--K 205 (216)
Q Consensus 160 lL~~---------~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtic------------------hs~-----T--~ 205 (216)
+|++ |++++.||+|+|||||++||+|+|.+|+++|||||+| |+. | .
T Consensus 158 ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~ 237 (320)
T 1edz_A 158 ILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSED 237 (320)
T ss_dssp HHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHH
T ss_pred HHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHh
Confidence 9999 8999999999999999999999999999999999999 887 4 7
Q ss_pred ChHHHHhcC
Q psy7981 206 NIQDVVKSP 214 (216)
Q Consensus 206 ~l~~~~k~a 214 (216)
+|++++++|
T Consensus 238 ~L~e~l~~A 246 (320)
T 1edz_A 238 LLKKCSLDS 246 (320)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHhccC
Confidence 899999876
No 11
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=99.53 E-value=1.5e-15 Score=132.56 Aligned_cols=142 Identities=16% Similarity=0.218 Sum_probs=115.8
Q ss_pred EeCCCcchHHHHHHH-HHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCC
Q psy7981 48 QVGGREDSNVYIRMK-MKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSP 126 (216)
Q Consensus 48 ~vg~~~as~~Yv~~k-~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p 126 (216)
.+| +|.+++|-... .++|+++|+++....| ++++++|.+.|+.||++ +++|+.|+.|+ ++++- .+++.++|
T Consensus 16 viG-~pi~hS~Sp~~h~~~~~~~gi~~~y~~~--~~~~~~l~~~i~~l~~~-~~~G~nVtiP~--k~~i~--~~~d~~~~ 87 (287)
T 1nvt_A 16 LIG-HPVEHSFSPIMHNAAFKDKGLNYVYVAF--DVLPENLKYVIDGAKAL-GIVGFNVTIPH--KIEIM--KYLDEIDK 87 (287)
T ss_dssp EEE-SSCTTCSHHHHHHHHHHHTTCCEEEEEE--ECCGGGGGGHHHHHHHH-TCCEEEECTTS--TTGGG--GGCSEECH
T ss_pred EEC-CCcccccCHHHHHHHHHHcCCCcEEEEE--EcCHHHHHHHHHHHHhC-CCCEEEEccCC--HHHHH--HHHHhcCH
Confidence 346 88999998888 8899999999998888 45679999999999965 89999999999 88872 34444555
Q ss_pred C-CCcccCCcc--chhHhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 127 E-KDVDGLNTI--NEGRVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 127 ~-KDVDG~~~~--n~G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
. |++.++++. +.|+++ |. . -|+.|+++.|++++++++||+|+|+|.+ -+|++++..|.++| +|+++++.
T Consensus 88 ~a~~igavnt~~~~~g~l~-g~-n----Td~~G~~~~L~~~~~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 88 DAQLIGAVNTIKIEDGKAI-GY-N----TDGIGARMALEEEIGRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp HHHHHTCCCEEEEETTEEE-EE-C----CHHHHHHHHHHHHHCCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSS
T ss_pred HHHHhCceeeEEeeCCEEE-Ee-c----CCHHHHHHHHHHhCCCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECC
Confidence 3 556666554 345554 31 1 2899999999999999999999999999 89999999999999 99999875
Q ss_pred CC
Q psy7981 204 TK 205 (216)
Q Consensus 204 T~ 205 (216)
..
T Consensus 160 ~~ 161 (287)
T 1nvt_A 160 VE 161 (287)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 12
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=99.52 E-value=2e-15 Score=130.90 Aligned_cols=141 Identities=16% Similarity=0.238 Sum_probs=119.9
Q ss_pred eCCCcchHHHHH-HHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCC
Q psy7981 49 VGGREDSNVYIR-MKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPE 127 (216)
Q Consensus 49 vg~~~as~~Yv~-~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~ 127 (216)
+| +|-+++|-- ...++++++|+++....|+ +++++|.+.|+.++ +++++|+.|++|+ +.++ ..+++.++|.
T Consensus 7 iG-~pi~hS~Sp~~h~~~~~~~g~~~~y~~~~--~~~~~l~~~i~~l~-~~~~~G~nVT~P~--K~~~--~~~ld~~~~~ 78 (271)
T 1nyt_A 7 FG-NPIAHSKSPFIHQQFAQQLNIEHPYGRVL--APINDFINTLNAFF-SAGGKGANVTVPF--KEEA--FARADELTER 78 (271)
T ss_dssp EE-SSCTTCSHHHHHHHHHHHHTCCCCEEEEE--CCTTCHHHHHHHHH-HTTCCEEEECTTC--HHHH--HHHCSEECHH
T ss_pred EC-CCcccccCHHHHHHHHHHCCCCcEEEEEE--cCHHHHHHHHHHHH-hCCCCeEEEccCC--HHHH--HHHHhhcCHH
Confidence 46 777777765 7788999999999888884 55789999999999 7899999999999 7665 5677888899
Q ss_pred -CCcccCCcc---chhHhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 128 -KDVDGLNTI---NEGRVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 128 -KDVDG~~~~---n~G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
|+++++|+. +-|+++ |. -+.+.|+++.|++++++++||+|+|+|.+ -+|++++..|.+.|++|+++++.
T Consensus 79 A~~igavNti~~~~~g~l~-G~-----ntD~~G~~~~L~~~~~~l~~k~vlViGaG-g~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 79 AALAGAVNTLMRLEDGRLL-GD-----NTDGVGLLSDLERLSFIRPGLRILLIGAG-GASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp HHHHTCCSEEEECTTSCEE-EE-----CCHHHHHHHHHHHHTCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSS
T ss_pred HHHhCCceEEEEcCCCeEE-Ee-----CCCHHHHHHHHHhcCcCcCCCEEEEECCc-HHHHHHHHHHHHcCCEEEEEECC
Confidence 999999986 556653 32 35799999999999999999999999997 48999999999999999999865
Q ss_pred C
Q psy7981 204 T 204 (216)
Q Consensus 204 T 204 (216)
.
T Consensus 152 ~ 152 (271)
T 1nyt_A 152 V 152 (271)
T ss_dssp H
T ss_pred H
Confidence 4
No 13
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.50 E-value=5.5e-15 Score=127.02 Aligned_cols=141 Identities=24% Similarity=0.335 Sum_probs=120.3
Q ss_pred EeCCCcchHHHH-HHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCC
Q psy7981 48 QVGGREDSNVYI-RMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSP 126 (216)
Q Consensus 48 ~vg~~~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p 126 (216)
.+| +|.+++|- ....++|+++|+++....+ +++++++.+.++.++.+ ++|+.++.|+ ++++ ...++.++|
T Consensus 6 ~~G-~pi~hs~sp~~h~~~~~~~g~~~~y~~~--~~~~~~l~~~i~~l~~~--~~G~~vt~P~--k~~i--~~~~~~l~~ 76 (263)
T 2d5c_A 6 VLG-HPVAHSLSPAMHAFALESLGLEGSYEAW--DTPLEALPGRLKEVRRA--FRGVNLTLPL--KEAA--LAHLDWVSP 76 (263)
T ss_dssp EEE-SSCTTCSHHHHHHHHHHHTTCCEEEEEE--ECCGGGHHHHHHHHHHH--CSEEEECTTC--TTGG--GGGCSEECH
T ss_pred EEC-CCcccccCHHHHHHHHHHcCCCCEEEEE--eCCHHHHHHHHHhcccc--CceEEEcccC--HHHH--HHHHHHHhH
Confidence 356 78888888 8889999999999988876 46778999999999987 9999999999 8877 356778888
Q ss_pred -CCCcccCCcc--chhHhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 127 -EKDVDGLNTI--NEGRVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 127 -~KDVDG~~~~--n~G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
.|+++|+++. +.|++.... .. ..|++..|++++++++| +++|||.+. +|++++..|.+.|++|++|++.
T Consensus 77 ~a~~~gavn~i~~~~g~~~g~n-td-----~~g~~~~l~~~~~~l~~-~v~iiG~G~-~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 77 EAQRIGAVNTVLQVEGRLFGFN-TD-----APGFLEALKAGGIPLKG-PALVLGAGG-AGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp HHHHHTCCCEEEEETTEEEEEC-CH-----HHHHHHHHHHTTCCCCS-CEEEECCSH-HHHHHHHHHHHTTCCEEEECSS
T ss_pred HHHHhCCCCcEEccCCeEEEeC-CC-----HHHHHHHHHHhCCCCCC-eEEEECCcH-HHHHHHHHHHHCCCEEEEEECC
Confidence 8999999998 777765331 12 26999999999999999 999999988 7999999999999999999975
Q ss_pred CC
Q psy7981 204 TK 205 (216)
Q Consensus 204 T~ 205 (216)
..
T Consensus 149 ~~ 150 (263)
T 2d5c_A 149 PQ 150 (263)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 14
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.43 E-value=4.2e-14 Score=122.78 Aligned_cols=142 Identities=19% Similarity=0.216 Sum_probs=119.8
Q ss_pred EeCCCcchHHHHHHHH-HHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCC
Q psy7981 48 QVGGREDSNVYIRMKM-KAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSP 126 (216)
Q Consensus 48 ~vg~~~as~~Yv~~k~-k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p 126 (216)
++| +|.+++|..... ++++++|+++....++ +++++|.+.|+.++ +++++|+.|+.|+ ++++ -.+++.++|
T Consensus 17 liG-~pi~hs~sp~~h~~~~~~~g~~~~y~~~~--~~~~~l~~~i~~l~-~~~~~G~nvtiP~--k~~i--~~~ld~l~~ 88 (275)
T 2hk9_A 17 VIG-FPVKHSLSPVFQNALIRYAGLNAVYLAFE--INPEELKKAFEGFK-ALKVKGINVTVPF--KEEI--IPLLDYVED 88 (275)
T ss_dssp EEE-SSCTTCSHHHHHHHHHHHHTCSEEEEEEE--CCGGGHHHHHHHHH-HHTCCEEEECTTS--TTTT--GGGCSEECH
T ss_pred EEC-CCcccccCHHHHHHHHHHcCCCcEEEEEE--CCHHHHHHHHHHHH-hCCCCEEEECccC--HHHH--HHHHHHhhH
Confidence 568 999999997665 9999999999888884 56789999999998 4689999999999 7766 356677888
Q ss_pred C-CCcccCCcc--chhHhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 127 E-KDVDGLNTI--NEGRVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 127 ~-KDVDG~~~~--n~G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
. |++.++++. +.|++.-. -+++.|++..|++++++++|++|+|||.+ .+|++++..|.+.|++|+++++.
T Consensus 89 ~A~~~gavnti~~~~g~~~g~------nTd~~G~~~~l~~~~~~~~~~~v~iiGaG-~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 89 TAKEIGAVNTVKFENGKAYGY------NTDWIGFLKSLKSLIPEVKEKSILVLGAG-GASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp HHHHHTCCCEEEEETTEEEEE------CCHHHHHHHHHHHHCTTGGGSEEEEECCS-HHHHHHHHHHHHHTCEEEEECSS
T ss_pred HHHHhCCcceEEeeCCEEEee------cCCHHHHHHHHHHhCCCcCCCEEEEECch-HHHHHHHHHHHHcCCEEEEEECC
Confidence 8 899999986 45554321 24788999999999999999999999987 57999999999999999999875
Q ss_pred C
Q psy7981 204 T 204 (216)
Q Consensus 204 T 204 (216)
.
T Consensus 162 ~ 162 (275)
T 2hk9_A 162 K 162 (275)
T ss_dssp H
T ss_pred H
Confidence 4
No 15
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=99.36 E-value=1.4e-13 Score=119.39 Aligned_cols=130 Identities=13% Similarity=0.150 Sum_probs=110.6
Q ss_pred HHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCC-CCcccCCcc---c
Q psy7981 62 KMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPE-KDVDGLNTI---N 137 (216)
Q Consensus 62 k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~-KDVDG~~~~---n 137 (216)
--+++++.|+++....|+ +++++|.+.|+.++ +++++|+.|+.|+ +.++ ..+++.++|. |+++++|.+ +
T Consensus 20 hn~~~~~~gl~~~y~~~~--~~~~~l~~~i~~~~-~~~~~G~nVT~P~--K~~v--~~~ld~~~~~A~~igavNti~~~~ 92 (272)
T 1p77_A 20 QNKLAAQTHQTMEYIAKL--GDLDAFEQQLLAFF-EEGAKGCNITSPF--KERA--YQLADEYSQRAKLAEACNTLKKLD 92 (272)
T ss_dssp HHHHHHHTTCCEEEEEEE--CCTTTHHHHHHHHH-HTTCCEEEECTTC--HHHH--HHHCSEECHHHHHHTCCSEEEECT
T ss_pred HHHHHHHCCcCeEEEEEE--cCHHHHHHHHHHHH-hCCCCEEEECcCC--HHHH--HHHHhhcCHHHHHhCCceEEEEcc
Confidence 467899999999888883 45688999999998 7799999999999 6555 6788999999 999999987 6
Q ss_pred hhHhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 138 EGRVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 138 ~G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
-|+++-.. . .+.|+++.|++++++++||+|+|+|.+. +|++++..|.+.|++|+++++...
T Consensus 93 ~g~l~g~N-T-----D~~G~~~~L~~~~~~~~~~~vlvlGaGg-~g~a~a~~L~~~G~~v~v~~R~~~ 153 (272)
T 1p77_A 93 DGKLYADN-T-----DGIGLVTDLQRLNWLRPNQHVLILGAGG-ATKGVLLPLLQAQQNIVLANRTFS 153 (272)
T ss_dssp TSCEEEEC-C-----HHHHHHHHHHHTTCCCTTCEEEEECCSH-HHHTTHHHHHHTTCEEEEEESSHH
T ss_pred CCEEEEec-C-----CHHHHHHHHHHhCCCcCCCEEEEECCcH-HHHHHHHHHHHCCCEEEEEECCHH
Confidence 67765331 1 3799999999999999999999999975 799999999999999999987543
No 16
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=99.27 E-value=1.7e-12 Score=114.25 Aligned_cols=141 Identities=16% Similarity=0.237 Sum_probs=118.0
Q ss_pred eCCCcchHHHHHHHH-HHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCC
Q psy7981 49 VGGREDSNVYIRMKM-KAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPE 127 (216)
Q Consensus 49 vg~~~as~~Yv~~k~-k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~ 127 (216)
+| +|.+++|...+. +++++.|+++....|+ ++++++.+.|+.|+ +.+++|+.|+.|+ +.++ ..+++.++|.
T Consensus 29 iG-~pi~hS~Sp~~hn~~~~~~Gl~~~Y~~~~--~~~~~l~~~v~~l~-~~~~~G~nVTiP~--K~~i--~~~ld~~~~~ 100 (297)
T 2egg_A 29 IG-FPVEHSLSPLMHNDAFARLGIPARYHLFS--VEPGQVGAAIAGVR-ALGIAGVNVTIPH--KLAV--IPFLDEVDEH 100 (297)
T ss_dssp EE-SSCTTCSHHHHHHHHHHHTTCCEEEEEEE--CCTTCHHHHHHHHH-HHTCCEEEECTTC--TTTT--GGGCSEECHH
T ss_pred EC-CCcccccCHHHHHHHHHHcCcCcEEEEEE--cCHHHHHHHHHHHh-hCCCCeEEECCcC--HHHH--HHHHHHHhHH
Confidence 36 788999988887 8999999999888774 45578888888888 5689999999999 7777 4678889998
Q ss_pred -CCcccCCcc--chhHhhcCCCCCcccCCHHHHHHHHHHhC-CCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecC
Q psy7981 128 -KDVDGLNTI--NEGRVAIGDMNGFIPCTPNGVLELIKRTN-VTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHS 202 (216)
Q Consensus 128 -KDVDG~~~~--n~G~l~~~~~~~~~PcTa~av~~lL~~~~-i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs 202 (216)
|++++++++ +-|+++... .. -.|+++.|+.++ +++.||+|+|+|.+. +|++++..|...|+ +|+++++
T Consensus 101 A~~iGavNti~~~~g~l~g~n-Td-----~~G~~~~l~~~~~~~l~~~~vlVlGaGg-~g~aia~~L~~~G~~~V~v~nR 173 (297)
T 2egg_A 101 ARRIGAVNTIINNDGRLVGYN-TD-----GLGYVQALEEEMNITLDGKRILVIGAGG-GARGIYFSLLSTAAERIDMANR 173 (297)
T ss_dssp HHHHTCCCEEEEETTEEEEEC-CH-----HHHHHHHHHHHTTCCCTTCEEEEECCSH-HHHHHHHHHHTTTCSEEEEECS
T ss_pred HHHhCCCCeEECcCCeEeecc-CC-----HHHHHHHHHHhCCCCCCCCEEEEECcHH-HHHHHHHHHHHCCCCEEEEEeC
Confidence 999999987 677765432 12 378999999998 999999999999975 79999999999998 9999987
Q ss_pred CC
Q psy7981 203 KT 204 (216)
Q Consensus 203 ~T 204 (216)
..
T Consensus 174 ~~ 175 (297)
T 2egg_A 174 TV 175 (297)
T ss_dssp SH
T ss_pred CH
Confidence 54
No 17
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=98.89 E-value=1.3e-09 Score=95.78 Aligned_cols=139 Identities=17% Similarity=0.217 Sum_probs=110.8
Q ss_pred eCCCcchHHHHHHHH-HHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCC
Q psy7981 49 VGGREDSNVYIRMKM-KAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPE 127 (216)
Q Consensus 49 vg~~~as~~Yv~~k~-k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~ 127 (216)
+| +|-++++--... ++++++|++.....|+ +++++|.+.++.+++ +++.|+.|..|+ . .+.-.+++.++|.
T Consensus 11 iG-~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~--v~~~~l~~~v~~l~~-~~~~G~nVTiP~--K--~~v~~~ld~ls~~ 82 (282)
T 3fbt_A 11 IG-EKLGHSHSSYIHKLIFEKVGIKGIYNLFE--VPKEKLKESVDTFKI-IKCGGLNVTIPY--K--VEVMKELYEISEK 82 (282)
T ss_dssp EE-SSCCCCHHHHHHHHHHHHHTCCEEEEEEE--CCGGGHHHHHHHHHH-TTCCEEEECTTC--T--TGGGGGCSEECHH
T ss_pred EC-CCccccchHHHHHHHHHHcCCCcEEEEEE--CCHHHHHHHHHHHhc-CCCCEEEEcCCC--H--HHHHHHHHhcCHH
Confidence 35 677777776666 7889999998777764 345889999988875 689999999998 3 5556788888888
Q ss_pred -CCcccCCccch--hHhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecC
Q psy7981 128 -KDVDGLNTINE--GRVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHS 202 (216)
Q Consensus 128 -KDVDG~~~~n~--G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs 202 (216)
|.+.+++.+.. |++. |... --.|+++.|+.++++++||+|+|+|.+. .|++++..|...|+ .|+++++
T Consensus 83 A~~iGAVNTv~~~~g~l~-G~NT-----D~~G~~~~L~~~~~~~~~k~vlvlGaGG-aaraia~~L~~~G~~~v~v~nR 154 (282)
T 3fbt_A 83 ARKIGAVNTLKFSREGIS-GFNT-----DYIGFGKMLSKFRVEIKNNICVVLGSGG-AARAVLQYLKDNFAKDIYVVTR 154 (282)
T ss_dssp HHHHTCCCEEEECSSCEE-EECC-----HHHHHHHHHHHTTCCCTTSEEEEECSST-THHHHHHHHHHTTCSEEEEEES
T ss_pred HHHcCCcceEEeeCCEEE-eeCC-----cHHHHHHHHHHcCCCccCCEEEEECCcH-HHHHHHHHHHHcCCCEEEEEeC
Confidence 89999987643 4432 2111 1379999999999999999999999985 59999999999998 8999985
No 18
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=98.63 E-value=3.6e-08 Score=87.85 Aligned_cols=141 Identities=18% Similarity=0.240 Sum_probs=109.8
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCC
Q psy7981 48 QVGGREDSNVYIRMKMK-AAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSP 126 (216)
Q Consensus 48 ~vg~~~as~~Yv~~k~k-~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p 126 (216)
.+| +|-++++--...+ +++++|+++....|+ +++++|.+.++.+.. .++.|+-|..|. +.+.-.+++.++|
T Consensus 42 viG-~Pi~hS~SP~ihn~~f~~~Gl~~~Y~~~~--v~~~~l~~~~~~l~~-~~~~G~nVTiP~----K~~v~~~lD~ls~ 113 (315)
T 3tnl_A 42 LIA-TPIRHSLSPTMHNEAFAKLGLDYVYLAFE--VGDKELKDVVQGFRA-MNLRGWNVSMPN----KTNIHKYLDKLSP 113 (315)
T ss_dssp EEE-SSCTTCSHHHHHHHHHHHHTCCEEEEEEE--CCHHHHHHHHHHHHH-TTCCEEEECTTS----TTTGGGGCSEECH
T ss_pred EEC-CCccccccHHHHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHhc-CCCCEEEEcCCC----hHHHHHHHHhcCH
Confidence 346 6677777666665 789999998887773 567888888888865 689999999998 3555567778888
Q ss_pred C-CCcccCCccch--hHhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecC
Q psy7981 127 E-KDVDGLNTINE--GRVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHS 202 (216)
Q Consensus 127 ~-KDVDG~~~~n~--G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs 202 (216)
. +.+.+++.+.. |++. |. . --..|+++.|+.++++++||+|+|+|.+ =+|+.++..|...|+ .|+++.+
T Consensus 114 ~A~~iGAVNTi~~~~g~l~-G~-N----TD~~Gf~~~L~~~~~~l~gk~~lVlGaG-G~g~aia~~L~~~Ga~~V~i~nR 186 (315)
T 3tnl_A 114 AAELVGAVNTVVNDDGVLT-GH-I----TDGTGYMRALKEAGHDIIGKKMTICGAG-GAATAICIQAALDGVKEISIFNR 186 (315)
T ss_dssp HHHHHTCCSEEEEETTEEE-EE-C----CHHHHHHHHHHHTTCCCTTSEEEEECCS-HHHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHHhCccceEEecCCEEE-Ee-C----CCHHHHHHHHHHcCCCccCCEEEEECCC-hHHHHHHHHHHHCCCCEEEEEEC
Confidence 7 88888886532 3333 21 1 1357899999999999999999999987 569999999999999 8999976
Q ss_pred C
Q psy7981 203 K 203 (216)
Q Consensus 203 ~ 203 (216)
.
T Consensus 187 ~ 187 (315)
T 3tnl_A 187 K 187 (315)
T ss_dssp S
T ss_pred C
Confidence 4
No 19
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.51 E-value=0.00011 Score=64.09 Aligned_cols=127 Identities=16% Similarity=0.193 Sum_probs=82.3
Q ss_pred HHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCC-CCcccCCcc--c-h
Q psy7981 63 MKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPE-KDVDGLNTI--N-E 138 (216)
Q Consensus 63 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~-KDVDG~~~~--n-~ 138 (216)
-.++++.|++.....++-. .++|.+.++.+- +.+..|.-|..|. +.+.-.+++.++|. +-+-.++.+ + -
T Consensus 28 n~~f~~~gl~~~Y~~~~v~--~~~l~~~~~~~~-~~~~~G~nVTiP~----K~~v~~~ld~l~~~A~~iGAVNTv~~~~~ 100 (281)
T 3o8q_A 28 TLFARQTQQSMIYTAQCVP--VDGFTEAAKHFF-AQGGRGCNVTVPF----KEEAYRFADRLTERARLAGAVNTLKKLDD 100 (281)
T ss_dssp HHHHHHTTCCEEEEEECCC--TTCHHHHHHHHH-HTTCCEEEECTTS----HHHHHHHCSEECHHHHHHTCCSEEEECTT
T ss_pred HHHHHHcCCCcEEEEeecC--HHHHHHHHHHHH-hCCCCEEEECCcc----HHHHHHHHhhcCHHHHhhCeeeEEEEcCC
Confidence 4567889999877766532 355666666654 2578999999997 33322333333221 111111111 0 0
Q ss_pred hHhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCC
Q psy7981 139 GRVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSK 203 (216)
Q Consensus 139 G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~ 203 (216)
|++. |. + --..|.++-|+..++++.||+|+|+|.+ -.|++++..|...|+ .|+++++.
T Consensus 101 g~l~-G~-N----TD~~G~~~~L~~~~~~l~~k~vlvlGaG-g~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 101 GEIL-GD-N----TDGEGLVQDLLAQQVLLKGATILLIGAG-GAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp SCEE-EE-C----CHHHHHHHHHHHTTCCCTTCEEEEECCS-HHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CcEE-EE-e----cHHHHHHHHHHHhCCCccCCEEEEECch-HHHHHHHHHHHhcCCCeEEEEECC
Confidence 1211 11 0 1246888888999999999999999997 579999999999996 99999764
No 20
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.28 E-value=0.00015 Score=62.89 Aligned_cols=127 Identities=13% Similarity=0.137 Sum_probs=80.9
Q ss_pred HHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCC-CCcccCCcc-c-hh
Q psy7981 63 MKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPE-KDVDGLNTI-N-EG 139 (216)
Q Consensus 63 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~-KDVDG~~~~-n-~G 139 (216)
-.++++.|++.....++-. .+++.+.++.+. +.+..|+-|..|. +.+.-.+++.++|. +-+-.++.+ + -|
T Consensus 22 n~~f~~~gl~~~Y~~~~v~--~~~l~~~~~~~~-~~~~~G~nVTiP~----K~~v~~~~d~l~~~A~~iGAvNTv~~~~g 94 (272)
T 3pwz_A 22 GLFAQASNQQLEYGAIEGS--LDDFEAQVLQFR-SEGGKGMNITAPF----KLRAFELADRRSERAQLARAANALKFEDG 94 (272)
T ss_dssp HHHHHHTTCCEEEEEEECC--TTTHHHHHHHHH-HTTCCEEEECTTC----HHHHHHHCSEECHHHHHHTCCSEEEEETT
T ss_pred HHHHHHcCCCcEEEEEEcC--HHHHHHHHHHHh-hCCCCEEEECchh----HHHHHHHHhhCCHHHHHhCccceEEccCC
Confidence 4567889999877665422 355666666554 2578999999997 33323333333331 111111111 0 12
Q ss_pred HhhcCCCCCcccCCHHHHHHH-HHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCC
Q psy7981 140 RVAIGDMNGFIPCTPNGVLEL-IKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSK 203 (216)
Q Consensus 140 ~l~~~~~~~~~PcTa~av~~l-L~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~ 203 (216)
++. |. + --..|.++- |+..+++++||+|+|+|.+ -.|++++..|.+.|+ .|+++.+.
T Consensus 95 ~l~-G~-N----TD~~G~~~~lL~~~~~~l~~k~~lvlGaG-g~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 95 RIV-AE-N----FDGIGLLRDIEENLGEPLRNRRVLLLGAG-GAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp EEE-EE-C----CHHHHHHHHHHTTSCCCCTTSEEEEECCS-HHHHHHHHHHHHTCCSEEEEECSC
T ss_pred eEE-Ee-c----CCHHHHHHHHHHHcCCCccCCEEEEECcc-HHHHHHHHHHHHcCCCEEEEEeCC
Confidence 221 21 1 123678884 8889999999999999987 569999999999996 99999764
No 21
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.21 E-value=0.00014 Score=63.42 Aligned_cols=127 Identities=18% Similarity=0.204 Sum_probs=80.6
Q ss_pred HHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCC-CCcccCCcc-c-hh
Q psy7981 63 MKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPE-KDVDGLNTI-N-EG 139 (216)
Q Consensus 63 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~-KDVDG~~~~-n-~G 139 (216)
..++++.|++.....|+- ..+++.+.++.+.. .++.|.-|..|. - .+.-.+++.++|. +-+-.++.+ + -|
T Consensus 20 n~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVTiP~--K--~~v~~~~d~l~~~A~~iGAVNTv~~~~g 92 (277)
T 3don_A 20 HANFQSLNLENTYEAINV--PVNQFQDIKKIISE-KSIDGFNVTIPH--K--ERIIPYLDDINEQAKSVGAVNTVLVKDG 92 (277)
T ss_dssp HHHHHHTTCCCEEEEEEC--CGGGGGGHHHHHHH-TTCSEEEECTTC--T--TTTGGGCSEECHHHHHHTCCCEEEEETT
T ss_pred HHHHHHcCcCcEEEEEEc--CHHHHHHHHHHHhh-CCCCEEEECcCC--H--HHHHHHhhhCCHHHHHhCceeEEEecCC
Confidence 457788999876665542 23445555554432 368999999997 2 2222233233221 111112211 0 12
Q ss_pred HhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCC
Q psy7981 140 RVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSK 203 (216)
Q Consensus 140 ~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~ 203 (216)
+++ |. =--..|.++-|+..+++++||+|+|+|.+ -.|++++..|.+.|+ .|+++.+.
T Consensus 93 ~l~-G~-----NTD~~G~~~~L~~~~~~l~~k~vlvlGaG-g~g~aia~~L~~~G~~~v~v~~R~ 150 (277)
T 3don_A 93 KWI-GY-----NTDGIGYVNGLKQIYEGIEDAYILILGAG-GASKGIANELYKIVRPTLTVANRT 150 (277)
T ss_dssp EEE-EE-----CCHHHHHHHHHHHHSTTGGGCCEEEECCS-HHHHHHHHHHHTTCCSCCEEECSC
T ss_pred EEE-EE-----CChHHHHHHHHHHhCCCcCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEeCC
Confidence 221 21 11357888999999999999999999987 569999999999999 89999764
No 22
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.95 E-value=0.0019 Score=56.20 Aligned_cols=129 Identities=16% Similarity=0.162 Sum_probs=80.9
Q ss_pred HHHHHHcCcceEEEeCCC---CCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCC-CCcccCCcc-c
Q psy7981 63 MKAAKEIGIDAQHVKLPR---SITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPE-KDVDGLNTI-N 137 (216)
Q Consensus 63 ~k~a~~~Gi~~~~~~l~~---~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~-KDVDG~~~~-n 137 (216)
-.++++.|++.....|+- .++.++|.+.++.+.. .++.|.-|..|. - .+.-.+++.++|. +-+-.++.+ +
T Consensus 24 n~~f~~~gl~~~Y~~~~~~~~~v~~~~l~~~~~~~~~-~~~~G~nVTiP~--K--~~v~~~lD~l~~~A~~iGAVNTv~~ 98 (283)
T 3jyo_A 24 EAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALY-LGFNGLNITHPY--K--QAVLPLLDEVSEQATQLGAVNTVVI 98 (283)
T ss_dssp HHHHHHTTCCEEEEEEETTSTTTTTCCHHHHHHHHHH-TTCCEEEECTTC--T--TTTGGGSSEECHHHHHHTCCCEEEE
T ss_pred HHHHHHcCCCeEEEEEEccccCCCHHHHHHHHHHHhh-CCCCEEEECccc--H--HHHHHHhhhCCHHHHHhCcceEEEE
Confidence 356788999987777631 2334555555555432 579999999998 2 2222233333221 111111111 0
Q ss_pred --hhHhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCC
Q psy7981 138 --EGRVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSK 203 (216)
Q Consensus 138 --~G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~ 203 (216)
-|++. |. + --..|.++-|+..+.+++||+|+|+|.+ =.|+.++..|...|+ .|+++.+.
T Consensus 99 ~~~g~l~-G~-N----TD~~G~~~~l~~~~~~l~~k~vlVlGaG-G~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 99 DATGHTT-GH-N----TDVSGFGRGMEEGLPNAKLDSVVQVGAG-GVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CTTSCEE-EE-C----HHHHHHHHHHHHHCTTCCCSEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCCeEE-Ee-c----CCHHHHHHHHHHhCcCcCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEECC
Confidence 11211 21 1 0236888889888999999999999987 569999999999999 69998653
No 23
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.82 E-value=0.0009 Score=58.02 Aligned_cols=128 Identities=22% Similarity=0.311 Sum_probs=79.2
Q ss_pred HHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCC-CCcccCCcc-c--h
Q psy7981 63 MKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPE-KDVDGLNTI-N--E 138 (216)
Q Consensus 63 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~-KDVDG~~~~-n--~ 138 (216)
-.+.++.|++.....++ +.++++.+.++.+...+++.|.-|..|. +.+.-.+++.++|. +-+-.++.+ + -
T Consensus 26 n~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~l~~~~~~~G~nVTiP~----K~~~~~~lD~ls~~A~~iGAVNTi~~~~d 99 (269)
T 3tum_A 26 NTWFNHNNCNLAMLPID--LHEAALDSFADTLRGWQNLRGCVVTVPY----KQALANRVDGLSERAAALGSINVIRRERD 99 (269)
T ss_dssp HHHHHHTTCSEEEEEEE--BCGGGHHHHHHHHHHBTTEEEEEECTTC----HHHHHTTSSEECHHHHHHTCCSEEEECTT
T ss_pred HHHHHHcCCCeEEEEee--cCHhhHHHHHHHHHhccCCCeeEecccc----HHHHHHHhccCCHHHHHcCceeEEEECCC
Confidence 44578899998766553 2234555555555555789999999996 22211222222221 111111111 0 1
Q ss_pred hHhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCC
Q psy7981 139 GRVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSK 203 (216)
Q Consensus 139 G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~ 203 (216)
|+++ |. + ---.|.++.|++.+++++||+|+|+|.+.. ++.++.-|...|+ .|+++++.
T Consensus 100 G~l~-G~-N----TD~~Gf~~~L~~~g~~~~~~~~lilGaGGa-arai~~aL~~~g~~~i~i~nRt 158 (269)
T 3tum_A 100 GRLL-GD-N----VDGAGFLGAAHKHGFEPAGKRALVIGCGGV-GSAIAYALAEAGIASITLCDPS 158 (269)
T ss_dssp SCEE-EE-C----CHHHHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEECSC
T ss_pred CEEE-EE-E----cChHHHHHHHHHhCCCcccCeEEEEecHHH-HHHHHHHHHHhCCCeEEEeCCC
Confidence 2221 11 0 123678888999999999999999999887 8888888888885 78998753
No 24
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.73 E-value=0.00057 Score=60.53 Aligned_cols=127 Identities=24% Similarity=0.318 Sum_probs=78.4
Q ss_pred HHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCC-CCcccCCcc-c-hh
Q psy7981 63 MKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPE-KDVDGLNTI-N-EG 139 (216)
Q Consensus 63 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~-KDVDG~~~~-n-~G 139 (216)
-.++++.|++.....|+- ..++|.+.++.+.. .++.|.-|..|. +.+.-.+++.++|. +-+-.++.+ + -|
T Consensus 51 n~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVTiP~----K~~v~~~lD~ls~~A~~iGAVNTi~~~~g 123 (312)
T 3t4e_A 51 NKALEKAGLPYTYMAFEV--DNTTFASAIEGLKA-LKMRGTGVSMPN----KQLACEYVDELTPAAKLVGAINTIVNDDG 123 (312)
T ss_dssp HHHHHHHTCSEEEEEEEC--CTTTHHHHHHHHHH-TTCCEEEECTTS----HHHHGGGCSEECHHHHHHTCCSEEEEETT
T ss_pred HHHHHHcCCCcEEEeEec--CHHHHHHHHHHHhh-CCCCEEEECchh----HHHHHHHhhhcCHHHHHhCceeEEEecCC
Confidence 466788999987766642 22444444444432 358999999996 22212222222221 111111111 1 12
Q ss_pred HhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCC
Q psy7981 140 RVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSK 203 (216)
Q Consensus 140 ~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~ 203 (216)
++. |. + ---.|.++-|+..+++++||+|+|+|.+.. |+.++..|...|+ .|+++.+.
T Consensus 124 ~l~-G~-N----TD~~Gf~~~L~~~~~~l~gk~~lVlGAGGa-araia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 124 YLR-GY-N----TDGTGHIRAIKESGFDMRGKTMVLLGAGGA-ATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp EEE-EE-C----HHHHHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEEECS
T ss_pred EEE-Ee-C----CcHHHHHHHHHhcCCCcCCCEEEEECcCHH-HHHHHHHHHHcCCCEEEEEECC
Confidence 211 21 1 123688888988899999999999998754 9999999999999 79999764
No 25
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=96.67 E-value=0.0015 Score=60.47 Aligned_cols=54 Identities=30% Similarity=0.346 Sum_probs=46.4
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+++|+...+-.+++.++..+.||+|+|+|.+.+ |++++.+|...|++|++|+..
T Consensus 190 ~~Gt~~slldgi~ratg~~L~GktVgIiG~G~I-G~~vA~~Lka~Ga~Viv~D~~ 243 (436)
T 3h9u_A 190 LYGCRESLVDGIKRATDVMIAGKTACVCGYGDV-GKGCAAALRGFGARVVVTEVD 243 (436)
T ss_dssp HHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSC
T ss_pred cccchHHHHHHHHHhcCCcccCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCC
Confidence 456766666666677899999999999999987 999999999999999999864
No 26
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=95.89 E-value=0.006 Score=52.92 Aligned_cols=123 Identities=20% Similarity=0.218 Sum_probs=76.8
Q ss_pred HHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCC-CCcccCCcc-c-hhHhhc
Q psy7981 67 KEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPE-KDVDGLNTI-N-EGRVAI 143 (216)
Q Consensus 67 ~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~-KDVDG~~~~-n-~G~l~~ 143 (216)
++.|++.....++- ..-+++++.++. .++.|.-|..|. +.+.-.+++.++|. +-+-.++.+ + -|++.
T Consensus 31 ~~~gl~~~Y~~~~v-~~l~~~~~~~~~----~~~~G~nVTiP~----K~~v~~~~d~l~~~A~~iGAVNTi~~~~g~l~- 100 (269)
T 3phh_A 31 KELRFLGHYHPILL-PLESHIKSEFLH----LGLSGANVTLPF----KERAFQVCDKIKGIALECGAVNTLVLENDELV- 100 (269)
T ss_dssp HHHSSEEEEEEEEC-CSSSCHHHHHHH----TTEEEEEECTTC----HHHHHHHSSEECGGGGGTTCCCEEEEETTEEE-
T ss_pred HHcCCCCEEeeEEh-hhHHHHHHHHhh----CCCCEEEEcccc----HHHHHHHHhhcCHHHHHhCceeEEEeeCCEEE-
Confidence 78999887666653 222344555543 579999999997 44445555556553 222233322 1 12222
Q ss_pred CCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHH
Q psy7981 144 GDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQD 209 (216)
Q Consensus 144 ~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~ 209 (216)
|+ =--..|.++-|+..+ ||+|+|+|.+. .|++++..|...|+.|+++.+.....++
T Consensus 101 G~-----NTD~~Gf~~~L~~~~----~k~vlvlGaGG-aaraia~~L~~~G~~v~V~nRt~~ka~~ 156 (269)
T 3phh_A 101 GY-----NTDALGFYLSLKQKN----YQNALILGAGG-SAKALACELKKQGLQVSVLNRSSRGLDF 156 (269)
T ss_dssp EE-----CCHHHHHHHHCC-------CCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSSCTTHHH
T ss_pred Ee-----cChHHHHHHHHHHcC----CCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 21 112467777777655 99999999864 5999999999999999999765444443
No 27
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.79 E-value=0.0092 Score=51.05 Aligned_cols=131 Identities=17% Similarity=0.093 Sum_probs=78.9
Q ss_pred HHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCCccchhHhhcC
Q psy7981 65 AAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLNTINEGRVAIG 144 (216)
Q Consensus 65 ~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~~~n~G~l~~~ 144 (216)
.+-..|++.....+ +++.++|.+.++.+--.....|.-+.-|+ -.+.+...+.+..+-.+ .--+.+.|.-. +.+
T Consensus 21 ~~~~~g~~~~y~~~--~v~~~~~~~~~~~~~~~~~~~g~~~t~~~--~~G~~~~~~~~~~~~~~-~~~~gavnt~~-~~~ 94 (287)
T 1lu9_A 21 VGYDGGADHITGYG--NVTPDNVGAYVDGTIYTRGGKEKQSTAIF--VGGGDMAAGERVFEAVK-KRFFGPFRVSC-MLD 94 (287)
T ss_dssp HHHHTTCSEEEEES--SCCTTTHHHHHHHHHSSCCGGGGGGEEEE--EECSCHHHHHHHHHHHH-HHCBTTBCCEE-EEC
T ss_pred eeeccCcceEeccC--CcCHHHHHhhhcceEEecCccccccceEE--EccchHHHHHHHHHHHH-HhcCCCeEEEE-ecC
Confidence 45578999876655 45667888888886333343343333343 12233332222221100 00011222211 111
Q ss_pred CCCCcccCCHHHHHHHHHHh-CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 145 DMNGFIPCTPNGVLELIKRT-NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 145 ~~~~~~PcTa~av~~lL~~~-~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
. .++ =-+..|.++.|+.. +.+++||+|+|+|.+.-+|+-++..|..+|+.|+++.+.
T Consensus 95 ~-~G~-nTd~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 95 S-NGS-NTTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp S-TTH-HHHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred C-CcC-CchHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 0 000 02467888889888 889999999999988889999999999999999998764
No 28
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=95.75 E-value=0.012 Score=54.97 Aligned_cols=51 Identities=33% Similarity=0.357 Sum_probs=41.8
Q ss_pred cCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 151 PCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 151 PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
.|.-..+-.+.+.+++.+.||+|+|+|-+. ||+.+|.+|...||.|++++.
T Consensus 228 G~~eslvdgI~Ratg~~L~GKTVgVIG~G~-IGr~vA~~lrafGa~Viv~d~ 278 (464)
T 3n58_A 228 GCKESLVDGIRRGTDVMMAGKVAVVCGYGD-VGKGSAQSLAGAGARVKVTEV 278 (464)
T ss_dssp HHHHHHHHHHHHHHCCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECS
T ss_pred cchHHHHHHHHHhcCCcccCCEEEEECcCH-HHHHHHHHHHHCCCEEEEEeC
Confidence 343333444455689999999999999997 799999999999999999975
No 29
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=95.73 E-value=0.011 Score=53.42 Aligned_cols=51 Identities=24% Similarity=0.271 Sum_probs=42.8
Q ss_pred cCCHHHHHHH----HHH-hCC-CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 151 PCTPNGVLEL----IKR-TNV-TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 151 PcTa~av~~l----L~~-~~i-~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
+.|+.|+... +++ +|. +++||+|+|+|-++ ||..++..|...|++|+++..
T Consensus 148 ~aTg~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~-VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 148 PVTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGN-VAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECS
T ss_pred cchhhHHHHHHHHHHHhhccccCCCcCEEEEECchH-HHHHHHHHHHHCCCEEEEEcC
Confidence 5788876654 455 476 89999999999877 599999999999999998875
No 30
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=95.71 E-value=0.47 Score=41.60 Aligned_cols=137 Identities=18% Similarity=0.141 Sum_probs=92.6
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCC------CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCC
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRS------ITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDIN 116 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~------~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id 116 (216)
.++.+..- .|-.---+=..++.++|.++....-++. .|-+|-...+..+ +|+|++-.|- |-.
T Consensus 40 ~~~~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~-----~D~iviR~~~----~~~ 107 (299)
T 1pg5_A 40 TISIAFFE---PSTRTYLSFQKAIINLGGDVIGFSGEESTSVAKGENLADTIRMLNNY-----SDGIVMRHKY----DGA 107 (299)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEEECC-------CCCHHHHHHHHHHH-----CSEEEEEESS----BTH
T ss_pred EEEEEecC---CCcchHHhHHHHHHHhCCEEEEeCCCCcccccCCCCHHHHHHHHHHh-----CCEEEEeCCC----hhH
Confidence 45555553 3443334457889999999877653331 2455666666666 5799998774 334
Q ss_pred HHHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEecCC--CcccHHHHHHhhhC
Q psy7981 117 AMLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIAGTNAVVLGRS--KIVGTPAAELLKWK 193 (216)
Q Consensus 117 ~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~Gk~vvViGrS--~~VG~Pla~lL~~~ 193 (216)
.+.+.+.. ++-.+|.|. | ....||=+++ ++.+.++.| +++|++|++||-. ..|.+.+...|..-
T Consensus 108 ~~~la~~~-------~vPVINaG~---g--~~~HPtQ~LaDl~Ti~e~~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~ 174 (299)
T 1pg5_A 108 SRFASEIS-------DIPVINAGD---G--KHEHPTQAVIDIYTINKHFN-TIDGLVFALLGDLKYARTVNSLLRILTRF 174 (299)
T ss_dssp HHHHHHHC-------SSCEEEEEE---T--TTBCHHHHHHHHHHHHHHHS-CSTTCEEEEEECCSSCHHHHHHHHHGGGS
T ss_pred HHHHHHhC-------CCCEEeCCC---C--CCcCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCCCchHHHHHHHHHhC
Confidence 44554332 234567532 2 3689998888 566666666 7999999999986 56889999999998
Q ss_pred -CCEEEEecCCC
Q psy7981 194 -HATVTVCHSKT 204 (216)
Q Consensus 194 -~ATVtichs~T 204 (216)
|+.|++|.=.+
T Consensus 175 ~g~~v~~~~P~~ 186 (299)
T 1pg5_A 175 RPKLVYLISPQL 186 (299)
T ss_dssp CCSEEEEECCGG
T ss_pred CCCEEEEECCch
Confidence 99999997554
No 31
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=95.62 E-value=0.062 Score=46.22 Aligned_cols=138 Identities=15% Similarity=0.255 Sum_probs=87.0
Q ss_pred EEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCC
Q psy7981 47 VQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSP 126 (216)
Q Consensus 47 I~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p 126 (216)
-.+|+. .|.+=. .-..++++.|++.....++ ...-+++++.+..+ ++.|.-|..|. -..+ -..++.++|
T Consensus 11 ~viG~P-hS~SP~-~hn~~~~~~gl~~~Y~~~~-~~~l~~~~~~~~~~----~~~G~nVTiP~--K~~i--~~~~d~~~~ 79 (271)
T 1npy_A 11 SLSGRP-SNFGTT-FHNYLYDKLGLNFIYKAFT-TQDIEHAIKGVRAL----GIRGCAVSMPF--KETC--MPFLDEIHP 79 (271)
T ss_dssp EECSSC-CSHHHH-HHHHHHHHHTCCEEEEEEC-CSCHHHHHHHHHHH----TCCEEEECTTC--TTTT--GGGCSEECH
T ss_pred EEECCC-CcccHH-HHHHHHHHcCCCcEEEeec-hhhHHHHHHHhccC----CCCeEEECcCC--HHHH--HHHHHHhhH
Confidence 356765 555544 3356889999998888777 33455666666655 47899999998 3222 122222222
Q ss_pred C-CCcccCCcc-c-hhHhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecC
Q psy7981 127 E-KDVDGLNTI-N-EGRVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHS 202 (216)
Q Consensus 127 ~-KDVDG~~~~-n-~G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs 202 (216)
. +.+-.++.+ + -|++. |. + -.-.|.+.-|+..+++ .|++|+|+|.+.. |+.++.-|...|+ .|+++.+
T Consensus 80 ~A~~iGAvNTi~~~~g~l~-g~-N----TD~~G~~~~l~~~~~~-~~~~vlvlGaGga-arav~~~L~~~G~~~i~v~nR 151 (271)
T 1npy_A 80 SAQAIESVNTIVNDNGFLR-AY-N----TDYIAIVKLIEKYHLN-KNAKVIVHGSGGM-AKAVVAAFKNSGFEKLKIYAR 151 (271)
T ss_dssp HHHTTTCCCEEEEETTEEE-EE-C----HHHHHHHHHHHHTTCC-TTSCEEEECSSTT-HHHHHHHHHHTTCCCEEEECS
T ss_pred HHHHhCCCCceECcCCEEE-ee-c----CCHHHHHHHHHHhCCC-CCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeC
Confidence 1 112222221 1 12222 11 1 0236777777777775 7899999998766 9999999999997 7999976
Q ss_pred C
Q psy7981 203 K 203 (216)
Q Consensus 203 ~ 203 (216)
.
T Consensus 152 t 152 (271)
T 1npy_A 152 N 152 (271)
T ss_dssp C
T ss_pred C
Confidence 4
No 32
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=95.43 E-value=0.019 Score=53.07 Aligned_cols=140 Identities=18% Similarity=0.261 Sum_probs=95.4
Q ss_pred CCceEEEEEeCCC------cchHH---HHHHHHHHHHHc-CcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEE---e
Q psy7981 40 FEPGLAIVQVGGR------EDSNV---YIRMKMKAAKEI-GIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIV---Q 106 (216)
Q Consensus 40 ~~P~LaiI~vg~~------~as~~---Yv~~k~k~a~~~-Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlv---q 106 (216)
....+++|.-|.. -+.++ -..+|.-..+++ ||++....|+- .+.++|.+.++.+- ++..||-+ .
T Consensus 62 ~~~~v~vvtdgt~ilGlG~iG~hS~sPvmh~ka~lf~~~gGid~~yi~ldv-~d~de~~~~v~~l~--~~f~GinvED~T 138 (439)
T 2dvm_A 62 KGNLVAVVSDGSRILGLGNIGPLAGLPVMEGKALLFKRFGGVDAFPIMIKE-QEPNKFIDIVKAIA--PTFGGINLEDIA 138 (439)
T ss_dssp GGGEEEEEECSTTBTTTBCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECSC-CSHHHHHHHHHHTG--GGCSEEEECSCC
T ss_pred cCcEEEEEECCCeEecccceeccccCHHHHHHHHHHHHhCCCCCeeeeeec-CCHHHHHHHHHHhC--ccCcEEEEEeCC
Confidence 4467777764432 12121 123455558888 89988888875 25789999999987 78899999 7
Q ss_pred CCCCCCCCCCHHHHhhhcCCCCCcccCC-cc-chhHhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccH
Q psy7981 107 MPLDSDNDINAMLVTDSVSPEKDVDGLN-TI-NEGRVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGT 184 (216)
Q Consensus 107 lPL~~P~~id~~~i~~~I~p~KDVDG~~-~~-n~G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~ 184 (216)
.|. .. .+++.++. .++ +. |-+. +..--.+-.|++.-|+..+.++++++|+|+|.+.. |+
T Consensus 139 ~P~----k~---~il~~l~~-----avNt~vf~dD~------~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgA-g~ 199 (439)
T 2dvm_A 139 SPK----CF---YILERLRE-----ELDIPVFHDDQ------QGTAAVVLAGLLNALKVVGKKISEITLALFGAGAA-GF 199 (439)
T ss_dssp TTH----HH---HHHHHHHH-----HCSSCEEEHHH------HHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHH-HH
T ss_pred Cch----HH---HHHHHHHH-----hcCEEEEeCCC------cEEeehHHHHHHHHHHHhCCCccCCEEEEECccHH-HH
Confidence 775 22 34444432 111 11 1110 11112234688889999999999999999998765 99
Q ss_pred HHHHHhhhCCC---EEEEec
Q psy7981 185 PAAELLKWKHA---TVTVCH 201 (216)
Q Consensus 185 Pla~lL~~~~A---TVtich 201 (216)
.++.+|...|+ .|++|.
T Consensus 200 aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 200 ATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp HHHHHHHHTTCCGGGEEEEE
T ss_pred HHHHHHHHcCCCcCeEEEEE
Confidence 99999999998 799998
No 33
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.39 E-value=0.015 Score=47.29 Aligned_cols=44 Identities=16% Similarity=0.106 Sum_probs=35.8
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHH
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQD 209 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~ 209 (216)
.+++||+|+|.|.|..+|+.++..|+++|++|+++.+....+.+
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~ 60 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE 60 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH
Confidence 35789999999999999999999999999999999876555544
No 34
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.10 E-value=0.42 Score=42.15 Aligned_cols=133 Identities=12% Similarity=0.089 Sum_probs=90.2
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCC------CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCC
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRS------ITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDIN 116 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~------~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id 116 (216)
.++.+..- .|-----+=..++.++|.++.... +.+ .|-+|-...+..+ +|+|++-.|- |-.
T Consensus 47 ~la~lF~e---~STRTR~SFE~A~~~LGg~~i~l~-~~~ss~~kgEsl~DTarvls~~-----~D~iviR~~~----~~~ 113 (309)
T 4f2g_A 47 TLAMIFEK---SSTRTRLSFEAGIFQLGGHAVFMS-TRDTQLGRGEPVEDSAQVISRM-----VDIIMIRTFE----QDI 113 (309)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEEC-CSSCEETBEECHHHHHHHHHHH-----CSEEEEECSC----HHH
T ss_pred eEEEEecC---CChhhHhhHHHHHHHcCCeEEEcC-cccccCCCCCCHHHHHHHHHHh-----CCEEEEecCC----HHH
Confidence 45555544 333333344778999999987654 222 2345555566666 6799987664 333
Q ss_pred HHHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC
Q psy7981 117 AMLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA 195 (216)
Q Consensus 117 ~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A 195 (216)
.+.+.+.. ++-.+|.| + ....||=+++ ++.+.++.| +++|++|++||-.+.|.+.+..+|..-|+
T Consensus 114 ~~~lA~~~-------~vPVINag----~--~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~~va~Sl~~~~~~~G~ 179 (309)
T 4f2g_A 114 IQRFAENS-------RVPVINGL----T--NEYHPCQVLADIFTYYEHRG-PIRGKTVAWVGDANNMLYTWIQAARILDF 179 (309)
T ss_dssp HHHHHHTC-------SSCEEEEE----C--SSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHhC-------CCCEEECC----C--CccCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCcchHHHHHHHHHHcCC
Confidence 33343322 24467764 2 3678998888 667777777 69999999999999999999999988899
Q ss_pred EEEEecC
Q psy7981 196 TVTVCHS 202 (216)
Q Consensus 196 TVtichs 202 (216)
+|++|.=
T Consensus 180 ~v~~~~P 186 (309)
T 4f2g_A 180 KLQLSTP 186 (309)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9999964
No 35
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=94.92 E-value=0.028 Score=51.73 Aligned_cols=53 Identities=26% Similarity=0.237 Sum_probs=44.7
Q ss_pred cccCCHHHHHHH----HHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEE-EecC
Q psy7981 149 FIPCTPNGVLEL----IKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVT-VCHS 202 (216)
Q Consensus 149 ~~PcTa~av~~l----L~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVt-ichs 202 (216)
.-++|..|++.. +++.|.+++||+|+|.|-+ .||.-++.+|.+.||+|. ++.+
T Consensus 193 r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~G-nVG~~~a~~L~~~GakVVavsD~ 250 (419)
T 3aoe_E 193 RDDAAGLGALLVLEALAKRRGLDLRGARVVVQGLG-QVGAAVALHAERLGMRVVAVATS 250 (419)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEEEET
T ss_pred CccchHHHHHHHHHHHHHhcCCCccCCEEEEECcC-HHHHHHHHHHHHCCCEEEEEEcC
Confidence 446899998765 5567999999999999955 559999999999999988 8777
No 36
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=94.89 E-value=0.037 Score=51.05 Aligned_cols=54 Identities=17% Similarity=0.230 Sum_probs=45.6
Q ss_pred cccCCHHHHHHHHH----HhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEE-EEecCC
Q psy7981 149 FIPCTPNGVLELIK----RTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATV-TVCHSK 203 (216)
Q Consensus 149 ~~PcTa~av~~lL~----~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATV-tichs~ 203 (216)
-.++|..|++..++ +.|.+++|++|+|-|- ..||.-++.+|.+.||+| +++.+.
T Consensus 196 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~-GnVG~~aa~~l~e~GakVVavsD~~ 254 (424)
T 3k92_A 196 RETATAQGVTICIEEAVKKKGIKLQNARIIIQGF-GNAGSFLAKFMHDAGAKVIGISDAN 254 (424)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCCGGGCEEEEECC-SHHHHHHHHHHHHHTCEEEEEECSS
T ss_pred CcccHHHHHHHHHHHHHHHcCCCcccCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCC
Confidence 35789999876654 5689999999999996 667999999999999996 788876
No 37
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=94.78 E-value=0.027 Score=52.78 Aligned_cols=50 Identities=36% Similarity=0.393 Sum_probs=41.2
Q ss_pred CHHHHHH-HHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 153 TPNGVLE-LIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 153 Ta~av~~-lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
|...++. +.+..+..+.||+|+|+|-+ -+|+.++..|...||.|+++...
T Consensus 247 t~~sl~dgi~r~tg~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 247 CRHSLPDGLMRATDVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp HHHHHHHHHHHHHCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSC
T ss_pred ccHHHHHHHHHHcCCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCC
Confidence 3344444 44567899999999999999 88999999999999999999753
No 38
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=94.77 E-value=0.82 Score=40.21 Aligned_cols=138 Identities=16% Similarity=0.081 Sum_probs=93.2
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCC-----CCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCH
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLP-----RSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINA 117 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~-----~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~ 117 (216)
.++.+... .|-.---+=.-++.++|.++....-. ...|-+|-...+..+ +|+|++-.|- +-..
T Consensus 41 ~l~~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~-----~D~iviR~~~----~~~~ 108 (307)
T 2i6u_A 41 GVAVIFDK---NSTRTRFSFELGIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRY-----VDAIVWRTFG----QERL 108 (307)
T ss_dssp EEEEEESS---CCSHHHHHHHHHHHHTTCEEEEEEGGGSGGGGTCCHHHHHHHHHHH-----EEEEEEECSS----HHHH
T ss_pred EEEEEecC---CCcchHHHHHHHHHHcCCeEEEECCccccCCCCCCHHHHHHHHHHh-----CCEEEEecCC----hhHH
Confidence 35555543 33322234478899999998877632 123455666666666 6799887664 3334
Q ss_pred HHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEecCC-CcccHHHHHHhhhCCC
Q psy7981 118 MLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIAGTNAVVLGRS-KIVGTPAAELLKWKHA 195 (216)
Q Consensus 118 ~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~Gk~vvViGrS-~~VG~Pla~lL~~~~A 195 (216)
+.+.+.. ++-.+|.| + ....||=+++ ++.+.++.| +++|++|++||-. +.|.+.+...|..-|+
T Consensus 109 ~~lA~~~-------~vPVINa~----~--~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~g~ 174 (307)
T 2i6u_A 109 DAMASVA-------TVPVINAL----S--DEFHPCQVLADLQTIAERKG-ALRGLRLSYFGDGANNMAHSLLLGGVTAGI 174 (307)
T ss_dssp HHHHHHC-------SSCEEESC----C--SSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCTTSHHHHHHHHHHHHTTC
T ss_pred HHHHhhC-------CCCEEcCC----C--CCcCccHHHHHHHHHHHHhC-CcCCeEEEEECCCCcCcHHHHHHHHHHCCC
Confidence 4444333 24456743 1 3678998888 556666666 7999999999997 7889999999999999
Q ss_pred EEEEecCCCCC
Q psy7981 196 TVTVCHSKTKN 206 (216)
Q Consensus 196 TVtichs~T~~ 206 (216)
.|++|.=.+-.
T Consensus 175 ~v~~~~P~~~~ 185 (307)
T 2i6u_A 175 HVTVAAPEGFL 185 (307)
T ss_dssp EEEEECCTTSC
T ss_pred EEEEECCcccc
Confidence 99999876643
No 39
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=94.74 E-value=0.035 Score=51.42 Aligned_cols=54 Identities=22% Similarity=0.240 Sum_probs=45.0
Q ss_pred cccCCHHHHHHH----HHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEE-EecCC
Q psy7981 149 FIPCTPNGVLEL----IKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVT-VCHSK 203 (216)
Q Consensus 149 ~~PcTa~av~~l----L~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVt-ichs~ 203 (216)
.-++|..|++.. +++.|.+++|++|+|.| +..||.-++.+|.+.||+|. ++.+.
T Consensus 210 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG-fGnVG~~~a~~L~e~GakvVavsD~~ 268 (440)
T 3aog_A 210 RRDATGRGVFITAAAAAEKIGLQVEGARVAIQG-FGNVGNAAARAFHDHGARVVAVQDHT 268 (440)
T ss_dssp CTTHHHHHHHHHHHHHHHHHTCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCcchHHHHHHHHHHHHHhcCCCccCCEEEEec-cCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 346899998755 55679999999999999 55669999999999999987 77663
No 40
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=94.54 E-value=0.034 Score=47.16 Aligned_cols=44 Identities=23% Similarity=0.276 Sum_probs=38.5
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHH
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQD 209 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~ 209 (216)
.+++||.|+|.|-|.-+|+-++..|.++|++|.++.+....+++
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 71 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQV 71 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 46899999999999999999999999999999999876554443
No 41
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.49 E-value=0.018 Score=49.14 Aligned_cols=120 Identities=13% Similarity=0.151 Sum_probs=76.3
Q ss_pred HHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCC-CCcccCCccchhHh
Q psy7981 63 MKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPE-KDVDGLNTINEGRV 141 (216)
Q Consensus 63 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~-KDVDG~~~~n~G~l 141 (216)
-.++++.|++.....++ ++.+++.+.++.+. .++.|.-|..|. +.+.-.+++. +|. +-+-.++.+-. +
T Consensus 20 n~~~~~~gl~~~Y~~~~--v~~~~l~~~~~~~~--~~~~G~nVT~P~----K~~v~~~~d~-~~~A~~iGAvNTi~~-~- 88 (253)
T 3u62_A 20 NEYFKRAGMNHSYGMEE--IPPESFDTEIRRIL--EEYDGFNATIPH----KERVMRYVEP-SEDAQRIKAVNCVFR-G- 88 (253)
T ss_dssp HHHHHHHTCCCEEEEEE--CCGGGHHHHHHHHH--HHCSEEEECTTC----TTGGGGGSEE-CHHHHHHTCCCEEET-T-
T ss_pred HHHHHHcCCCCEEEeEe--cCHHHHHHHHHHHh--hCCCceeecCCh----HHHHHHHhCC-CHHHHHcCcceEeec-C-
Confidence 35678899988766654 23467777777776 679999999998 2222222222 221 11112221110 0
Q ss_pred hcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCC
Q psy7981 142 AIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSK 203 (216)
Q Consensus 142 ~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~ 203 (216)
.|... --.|.++-|+.. +++| +|+|||.+. .|++++..|.+.|+ .|+++.+.
T Consensus 89 -~G~NT-----D~~G~~~~l~~~--~~~~-~vliiGaGg-~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 89 -KGYNT-----DWVGVVKSLEGV--EVKE-PVVVVGAGG-AARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp -EEECC-----HHHHHHHHTTTC--CCCS-SEEEECCSH-HHHHHHHHHHHTTCCCEEEEESC
T ss_pred -EEEcc-----hHHHHHHHHHhc--CCCC-eEEEECcHH-HHHHHHHHHHHcCCCEEEEEeCC
Confidence 23211 124778888766 5689 999999875 59999999999998 89999763
No 42
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=94.46 E-value=1.1 Score=39.40 Aligned_cols=140 Identities=16% Similarity=0.055 Sum_probs=94.4
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCC--CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHH
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSI--TEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLV 120 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~--~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i 120 (216)
.++.+... .|-.---+=.-++.++|.++....-.... .-|-+.+.++-|+.= +|+|.+-.|- +-..+.+
T Consensus 47 ~~~~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~----~~~~~~l 117 (301)
T 2ef0_A 47 VLALLFEK---PSLRTRTTLEVAMVHLGGHAVYLDQKQVGIGEREPVRDVAKNLERF--VEGIAARVFR----HETVEAL 117 (301)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEEEGGGSCTTTCCCHHHHHHHHTTT--CSEEEEECSS----HHHHHHH
T ss_pred EEEEEecc---CCcchHHHHHHHHHHcCCeEEEECCcccccCCCCchHHHHHHHHHh--CCEEEEecCC----hHHHHHH
Confidence 35555543 33333334578899999998877633211 123466666666555 6899987664 3334444
Q ss_pred hhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEE
Q psy7981 121 TDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTV 199 (216)
Q Consensus 121 ~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVti 199 (216)
.+.. ++-.+|.| + ....||=+++ .+.+.++.| +++|++|++||-.+.|.+.+...|..-|+.|++
T Consensus 118 a~~~-------~vPVINa~----~--~~~HPtQaLaDl~Ti~e~~g-~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~ 183 (301)
T 2ef0_A 118 ARHA-------KVPVVNAL----S--DRAHPLQALADLLTLKEVFG-GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRV 183 (301)
T ss_dssp HHHC-------SSCEEEEE----C--SSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEE
T ss_pred HHHC-------CCCEEeCC----C--CccCchHHHHHHHHHHHHhC-CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEE
Confidence 4332 24456743 2 3678998888 556666666 799999999999888999999999888999999
Q ss_pred ecCCCC
Q psy7981 200 CHSKTK 205 (216)
Q Consensus 200 chs~T~ 205 (216)
|+=.+-
T Consensus 184 ~~P~~~ 189 (301)
T 2ef0_A 184 ATPKGY 189 (301)
T ss_dssp ECCTTC
T ss_pred ECCchh
Confidence 986653
No 43
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.46 E-value=0.16 Score=46.25 Aligned_cols=146 Identities=21% Similarity=0.171 Sum_probs=97.0
Q ss_pred CceEEEEEeCCCc---chHHH------HHHHHHHH-HHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCC
Q psy7981 41 EPGLAIVQVGGRE---DSNVY------IRMKMKAA-KEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLD 110 (216)
Q Consensus 41 ~P~LaiI~vg~~~---as~~Y------v~~k~k~a-~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~ 110 (216)
...++|+.=|..- +..-| ...|.... .-.||++..+.+... +.+|+++.++++- |...|| |+-=+
T Consensus 69 ~~~V~VvTdg~~vLGlGD~G~~ag~pI~egK~~Lf~~~agid~~pi~ldv~-~~dE~v~~vk~~~--p~f~~i--~lED~ 143 (388)
T 1vl6_A 69 WNTVAVVSDGSAVLGLGNIGPYGALPVMEGKAFLFKAFADIDAFPICLSES-EEEKIISIVKSLE--PSFGGI--NLEDI 143 (388)
T ss_dssp GGEEEEEECSTTBTTTBSCCHHHHHHHHHHHHHHHHHHHCCEEEEEECSCC-CHHHHHHHHHHTG--GGCSEE--EECSC
T ss_pred CCeEEEEECCccccCCCccccccCCcchhCHHHHHHhccCCceEeEEeCCC-CHHHHHHHHHHcC--CcceEe--CHhhc
Confidence 3567777655431 22222 23454433 357999999988865 5899999999875 555554 32111
Q ss_pred CCCCCCHHHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHh
Q psy7981 111 SDNDINAMLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELL 190 (216)
Q Consensus 111 ~P~~id~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL 190 (216)
+.-+--++.+...-+-|+.-||.--. +-.-.+..|++.-++-.|.+++..+|||+|.+.. |.-.+.+|
T Consensus 144 --~~p~af~il~r~r~~~~Ipvf~DDiq---------GTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaA-G~~iAkll 211 (388)
T 1vl6_A 144 --GAPKCFRILQRLSEEMNIPVFHDDQQ---------GTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAA-GYNIVKFL 211 (388)
T ss_dssp --CTTHHHHHHHHHHHHCSSCEEEHHHH---------HHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHH-HHHHHHHH
T ss_pred --CCHHHHHHHHHhhhhcCcceeccccc---------cHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHH-HHHHHHHH
Confidence 11222334444443345655653322 3344567788888888899999999999998865 99999999
Q ss_pred hhCCC-EEEEecCC
Q psy7981 191 KWKHA-TVTVCHSK 203 (216)
Q Consensus 191 ~~~~A-TVtichs~ 203 (216)
...|+ .|++|.++
T Consensus 212 ~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 212 LDLGVKNVVAVDRK 225 (388)
T ss_dssp HHHTCCEEEEEETT
T ss_pred HhCCCCeEEEEECC
Confidence 99999 89999997
No 44
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=94.29 E-value=0.27 Score=43.49 Aligned_cols=140 Identities=16% Similarity=0.078 Sum_probs=94.4
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCC--CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHH
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSI--TEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLV 120 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~--~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i 120 (216)
.++.+... .|-.---+=.-++.++|.++....-.... .-|-+.+.++-|+.= +|+|++-.|- |-..+.+
T Consensus 48 ~la~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~----~~~~~~l 118 (315)
T 1pvv_A 48 TLAMIFQK---PSTRTRVSFEVAMAHLGGHALYLNAQDLQLRRGETIADTARVLSRY--VDAIMARVYD----HKDVEDL 118 (315)
T ss_dssp EEEEEESS---CCSHHHHHHHHHHHHTTSEEEEEEGGGSTTTTTCCHHHHHHHHTTT--CSEEEEECSS----HHHHHHH
T ss_pred EEEEEecC---CCcchHHHHHHHHHHcCCeEEEECCccccCCCCcCHHHHHHHHHHh--CcEEEEecCc----hHHHHHH
Confidence 35555543 33222334478899999998877632211 124566666666555 6899988664 3334444
Q ss_pred hhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEE
Q psy7981 121 TDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTV 199 (216)
Q Consensus 121 ~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVti 199 (216)
.+.. ++-.+|.|- ....||=+++ ++.+.++.| +++|++|++||-.+.|.+.+...|..-|+.|++
T Consensus 119 A~~~-------~vPVINa~~------~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~ 184 (315)
T 1pvv_A 119 AKYA-------TVPVINGLS------DFSHPCQALADYMTIWEKKG-TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVV 184 (315)
T ss_dssp HHHC-------SSCEEEEEC------SSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHhC-------CCCEEcCCC------CCCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEE
Confidence 4333 234567421 2678998888 566666666 799999999999888999999999999999999
Q ss_pred ecCCCC
Q psy7981 200 CHSKTK 205 (216)
Q Consensus 200 chs~T~ 205 (216)
|.=.+-
T Consensus 185 ~~P~~~ 190 (315)
T 1pvv_A 185 ATPEGY 190 (315)
T ss_dssp ECCTTC
T ss_pred ECCccc
Confidence 987664
No 45
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=94.29 E-value=0.75 Score=41.29 Aligned_cols=141 Identities=13% Similarity=0.042 Sum_probs=93.1
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCC--CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHH
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSI--TEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLV 120 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~--~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i 120 (216)
.++.+..- .|-.---+=..++.++|.++......+.. .-|-+.+.++-|+.= +|+|++-.|- |-+.+.+
T Consensus 68 ~va~lF~e---~STRTR~SFE~A~~~LGg~~i~l~~~~s~l~kgEsl~DTarvLs~~--~D~IviR~~~----~~~~~~l 138 (353)
T 3sds_A 68 TVAMMFSK---RSTRTRVSTEGAVVKMGGHPMFLGKDDIQLGVNESLYDTSVVISSM--VSCIVARVGP----HSDIANL 138 (353)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECTTTC--CCSSCHHHHHHHHHTS--CSEEEEECSS----HHHHHHH
T ss_pred EEEEEecC---CchhHHHHHHHHHHHcCCeEEecCCccccccCCccHHHHHHHHHHh--cCEEEEEeCC----hHHHHHH
Confidence 45555544 33333334478899999998765322110 114555666666554 7899887553 3334444
Q ss_pred hhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCC------------CCCCCeEEEecCCCcccHHHH
Q psy7981 121 TDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNV------------TIAGTNAVVLGRSKIVGTPAA 187 (216)
Q Consensus 121 ~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i------------~l~Gk~vvViGrS~~VG~Pla 187 (216)
.+.. ++-.+|.| + ....||=+++ ++.+.+++|- .++|++|++||-.+.|..-+.
T Consensus 139 A~~s-------~vPVINag----~--d~~HPtQaLaDl~TI~E~~G~~~~~~~~~~~~~~l~glkva~vGD~~nva~Sl~ 205 (353)
T 3sds_A 139 AKHS-------SVPVINAL----C--DTFHPLQAIADFLTIHESFASQSATHGTHPSSLGLEGLKIAWVGDANNVLFDLA 205 (353)
T ss_dssp HHHC-------SSCEEEEE----C--SSCCHHHHHHHHHHHHHHTC--------CTTCCSCTTCEEEEESCCCHHHHHHH
T ss_pred HhhC-------CCCEEECC----C--CCCCcHHHHHHHHHHHHHhCCCcccccccccccccCCCEEEEECCCchHHHHHH
Confidence 4332 23456764 1 2578998888 6677777774 259999999999999999999
Q ss_pred HHhhhCCCEEEEecCCCC
Q psy7981 188 ELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 188 ~lL~~~~ATVtichs~T~ 205 (216)
.+|..-|++|++|.=.+-
T Consensus 206 ~~l~~lG~~v~~~~P~~~ 223 (353)
T 3sds_A 206 IAATKMGVNVAVATPRGY 223 (353)
T ss_dssp HHHHHTTCEEEEECCTTC
T ss_pred HHHHHcCCEEEEECCccc
Confidence 999999999999976554
No 46
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=94.29 E-value=2 Score=37.75 Aligned_cols=173 Identities=13% Similarity=0.071 Sum_probs=109.9
Q ss_pred hcccHHHHHHHHHHHHHHHHHHHhcCC--CCCc-eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCC----CCH
Q psy7981 12 ILSGTAVSGDIREGLKERVKKLKERLP--DFEP-GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRS----ITE 84 (216)
Q Consensus 12 il~Gk~vA~~i~~~ik~~v~~l~~~~~--~~~P-~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~----~~~ 84 (216)
+|+-..+..+=.+.|-+....+++... -.+- .++.+... .|-.---+=.-++.++|.++....-.+. ..-
T Consensus 9 ~ls~~dls~~ei~~ll~~A~~lk~~~~~~~L~gk~la~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~~~S~~~kg 85 (310)
T 3csu_A 9 IISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFE---ASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKG 85 (310)
T ss_dssp BCCGGGCCHHHHHHHHHHHHHHHHSCCTTTTTTCEEEEEESS---CCHHHHHHHHHHHHTTTCEEEEESCC-----CCSH
T ss_pred ccchhhCCHHHHHHHHHHHHHHHhcccccccCCCEEEEEecC---CCccHHHHHHHHHHHhCCeEEEeCCCccchhhccC
Confidence 344444443333444455555553210 0112 45555554 3444344457889999998877654432 135
Q ss_pred HHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHH
Q psy7981 85 IELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKR 163 (216)
Q Consensus 85 ~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~ 163 (216)
|-+.+.++-|+.= +|+|++-.|- +-..+.+.+.. | ++-.+|.|- | ....||=+++ ++.+.++
T Consensus 86 Esl~DTarvls~~--~D~iviR~~~----~~~~~~la~~~-~-----~vPVINag~---G--~~~HPtQaLaDl~Ti~e~ 148 (310)
T 3csu_A 86 ETLADTISVISTY--VDAIVMRHPQ----EGAARLATEFS-G-----NVPVLNAGD---G--SNQHPTQTLLDLFTIQET 148 (310)
T ss_dssp HHHHHHHHHHTTT--CSEEEEEESS----TTHHHHHHHHC-T-----TCCEEEEEE---T--TSCCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHh--CCEEEEECCC----hhHHHHHHHhc-C-----CCCEEcCcc---C--CCCCchHHHHHHHHHHHH
Confidence 7888888888776 7899998775 33344444332 1 234566532 2 3688998888 5666666
Q ss_pred hCCCCCCCeEEEecCC--CcccHHHHHHhhhC-CCEEEEecCCCC
Q psy7981 164 TNVTIAGTNAVVLGRS--KIVGTPAAELLKWK-HATVTVCHSKTK 205 (216)
Q Consensus 164 ~~i~l~Gk~vvViGrS--~~VG~Pla~lL~~~-~ATVtichs~T~ 205 (216)
.| .++|++|++||-. ..|.+.+...|..- |+.|++|+=.+-
T Consensus 149 ~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~ 192 (310)
T 3csu_A 149 QG-RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDAL 192 (310)
T ss_dssp HS-CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred hC-CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCccc
Confidence 66 7999999999986 46889999999998 999999976553
No 47
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=94.28 E-value=0.042 Score=46.48 Aligned_cols=44 Identities=27% Similarity=0.270 Sum_probs=38.7
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHH
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQD 209 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~ 209 (216)
.+++||.|+|.|-|.-+|+-++..|.++|+.|.++......+.+
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 72 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAA 72 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 46799999999999999999999999999999999876655544
No 48
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=94.22 E-value=0.32 Score=43.51 Aligned_cols=124 Identities=10% Similarity=0.055 Sum_probs=87.2
Q ss_pred HHHHHHHHcCcceEEEeC-----CCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCCc
Q psy7981 61 MKMKAAKEIGIDAQHVKL-----PRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLNT 135 (216)
Q Consensus 61 ~k~k~a~~~Gi~~~~~~l-----~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~~ 135 (216)
+=..++.++|.++....- ....|-+|-...+..+ +|+|++--|- +-..+.+.+.. ++-.
T Consensus 80 SFE~A~~~LGg~~i~l~~~~ssl~kgEsl~DTarvLs~~-----~D~IviR~~~----~~~~~~lA~~~-------~vPV 143 (339)
T 4a8t_A 80 SFETAMEQLGGHGEYLAPGQIQLGGHETIEDTSRVLSRL-----VDILMARVER----HHSIVDLANCA-------TIPV 143 (339)
T ss_dssp HHHHHHHHTTCEEEEECCC-CCSSSSSCHHHHHHHHHHH-----CSEEEEECSS----HHHHHHHHHHC-------SSCE
T ss_pred HHHHHHHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHh-----CCEEEEecCc----HHHHHHHHHhC-------CCCE
Confidence 347889999999886542 1223456666666666 6799887663 33334443332 2335
Q ss_pred cchhHhhcCCCCCcccCCHHH-HHHHHHHh--CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCC
Q psy7981 136 INEGRVAIGDMNGFIPCTPNG-VLELIKRT--NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKN 206 (216)
Q Consensus 136 ~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~--~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~ 206 (216)
+|.|- ....||=+++ ++.+.+++ |-+++|++|++||-.+.|.+.+..+|..-|++|++|.=.+-.
T Consensus 144 INag~------~~~HPtQaLaDl~Ti~e~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~ 211 (339)
T 4a8t_A 144 INGMS------DYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQ 211 (339)
T ss_dssp EECCC------SSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSS
T ss_pred EECCC------CCcCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccC
Confidence 67541 2678998888 56666766 547999999999999999999999999999999999765533
No 49
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=94.21 E-value=0.028 Score=51.70 Aligned_cols=54 Identities=20% Similarity=0.180 Sum_probs=45.4
Q ss_pred cccCCHHHHHHH----HHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEE-EecCC
Q psy7981 149 FIPCTPNGVLEL----IKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVT-VCHSK 203 (216)
Q Consensus 149 ~~PcTa~av~~l----L~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVt-ichs~ 203 (216)
.-++|..|++.. +++.|.+++|++|+|.| +..||.-++.+|.+.||+|. ++.+.
T Consensus 187 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG-~GnVG~~~a~~L~~~GakvVavsD~~ 245 (421)
T 2yfq_A 187 RNEATGFGVAVVVRESAKRFGIKMEDAKIAVQG-FGNVGTFTVKNIERQGGKVCAIAEWD 245 (421)
T ss_dssp CTTHHHHHHHHHHHHHHHHTTCCGGGSCEEEEC-CSHHHHHHHHHHHHTTCCEEECCBCC
T ss_pred CCcchHHHHHHHHHHHHHhcCCCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEecC
Confidence 346899998765 45679999999999999 55569999999999999987 77776
No 50
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=94.20 E-value=0.061 Score=49.74 Aligned_cols=50 Identities=28% Similarity=0.412 Sum_probs=42.3
Q ss_pred CCHHHHHHHHH-HhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 152 CTPNGVLELIK-RTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 152 cTa~av~~lL~-~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
.|..++++=+. .++..+.||+|+|+|-+. +|+.++..|...||.|+++..
T Consensus 201 Gt~~s~~~gi~rat~~~L~GktV~ViG~G~-IGk~vA~~Lra~Ga~Viv~D~ 251 (435)
T 3gvp_A 201 CCRESILDGLKRTTDMMFGGKQVVVCGYGE-VGKGCCAALKAMGSIVYVTEI 251 (435)
T ss_dssp HHHHHHHHHHHHHHCCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECS
T ss_pred hhHHHHHHHHHHhhCceecCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEeC
Confidence 45666666444 468899999999999998 699999999999999999975
No 51
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=94.10 E-value=0.29 Score=43.70 Aligned_cols=137 Identities=13% Similarity=0.058 Sum_probs=92.4
Q ss_pred EEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCC-----CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHH
Q psy7981 44 LAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRS-----ITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAM 118 (216)
Q Consensus 44 LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~-----~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~ 118 (216)
++.+..- .|-.---+=.-++.++|.++....-... .|-+|-...+..+ +|+|.+--|- +-..+
T Consensus 48 la~lF~e---~STRTR~SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~-----~D~IviR~~~----~~~~~ 115 (335)
T 1dxh_A 48 IALIFEK---TSTRTRCAFEVAAYDQGANVTYIDPNSSQIGHKESMKDTARVLGRM-----YDAIEYRGFK----QEIVE 115 (335)
T ss_dssp EEEEESS---CCHHHHHHHHHHHHHTTCEEEEECTTTCCBTTTBCHHHHHHHHHHH-----CSEEEEECSC----HHHHH
T ss_pred EEEEecC---CCcchHHHHHHHHHHcCCeEEEECCccccCcCCCcHHHHHHHHHhh-----CCEEEEecCC----hhHHH
Confidence 4555543 3333333447889999999877752211 2455555556666 5788887663 33344
Q ss_pred HHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEecCC-CcccHHHHHHhhhCCCE
Q psy7981 119 LVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIAGTNAVVLGRS-KIVGTPAAELLKWKHAT 196 (216)
Q Consensus 119 ~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~Gk~vvViGrS-~~VG~Pla~lL~~~~AT 196 (216)
.+.+.. ++-.+|.| + ....||=+++ .+.+.++.|-+++|++|++||-. +.|.+.+...+..-|+.
T Consensus 116 ~lA~~s-------~vPVINa~----~--~~~HPtQ~LaDl~Ti~e~~g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~ 182 (335)
T 1dxh_A 116 ELAKFA-------GVPVFNGL----T--DEYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMD 182 (335)
T ss_dssp HHHHHS-------SSCEEEEE----C--SSCCHHHHHHHHHHHHHTCSSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCE
T ss_pred HHHHhC-------CCCEEcCC----C--CCCCcHHHHHHHHHHHHHcCCCcCCeEEEEecCCccchHHHHHHHHHHcCCE
Confidence 444333 24456743 2 3688998888 55666666658999999999997 78899999999999999
Q ss_pred EEEecCCCC
Q psy7981 197 VTVCHSKTK 205 (216)
Q Consensus 197 Vtichs~T~ 205 (216)
|++|.=.+-
T Consensus 183 v~~~~P~~~ 191 (335)
T 1dxh_A 183 VRIAAPKAL 191 (335)
T ss_dssp EEEECCGGG
T ss_pred EEEECCccc
Confidence 999976553
No 52
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=94.09 E-value=0.05 Score=45.98 Aligned_cols=42 Identities=26% Similarity=0.317 Sum_probs=36.9
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
.+++||.|+|.|-|.-+|+-++..|.++|+.|.++. +...+.
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~-r~~~~~ 68 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWG-RTDGVK 68 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-SSTHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEc-CHHHHH
Confidence 578999999999999999999999999999999988 444343
No 53
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=94.02 E-value=0.35 Score=43.55 Aligned_cols=137 Identities=11% Similarity=0.094 Sum_probs=93.2
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCC-----CCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCH
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPR-----SITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINA 117 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~-----~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~ 117 (216)
.++.+..- .|-.---+=.-++.++|..+....-.. ..|-+|-...+..+ +|+|.+--|- +-..
T Consensus 69 ~la~lF~e---~STRTR~SFE~A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~~-----~D~IviR~~~----~~~~ 136 (359)
T 2w37_A 69 NIALLFEK---SSTRTRSAFTTASIDLGAHPEYLGQNDIQLGKKESTSDTAKVLGSM-----FDGIEFRGFK----QSDA 136 (359)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHHH-----CSEEEEESSC----HHHH
T ss_pred EEEEEecC---CCccHHHHHHHHHHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHh-----cCEEEEecCC----hHHH
Confidence 35555543 333333345788999999987775322 12455666666666 5788887663 3334
Q ss_pred HHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEecCC-CcccHHHHHHhhhCCC
Q psy7981 118 MLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIAGTNAVVLGRS-KIVGTPAAELLKWKHA 195 (216)
Q Consensus 118 ~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~Gk~vvViGrS-~~VG~Pla~lL~~~~A 195 (216)
+.+.+.. ++-.+|.| + ....||=+++ ++.+.++.| +++|.+|++||-. +.|.+.+...|..-|+
T Consensus 137 ~~lA~~s-------~vPVINa~----~--~~~HPtQaLaDl~Ti~E~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~lG~ 202 (359)
T 2w37_A 137 EILARDS-------GVPVWNGL----T--DEWHPTQMLADFMTVKENFG-KLQGLTLTFMGDGRNNVANSLLVTGAILGV 202 (359)
T ss_dssp HHHHHHS-------SSCEEEEE----C--SSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCTTSHHHHHHHHHHHHHTC
T ss_pred HHHHHhC-------CCCEEcCC----C--CCCCccHHHHHHHHHHHHhC-CcCCeEEEEECCCccchHHHHHHHHHHcCC
Confidence 4444333 24457743 2 3678998888 666666666 7999999999987 7889999999988899
Q ss_pred EEEEecCCCC
Q psy7981 196 TVTVCHSKTK 205 (216)
Q Consensus 196 TVtichs~T~ 205 (216)
.|++|.=.+-
T Consensus 203 ~v~~~~P~~l 212 (359)
T 2w37_A 203 NIHIVAPKAL 212 (359)
T ss_dssp EEEEECCGGG
T ss_pred EEEEECCccc
Confidence 9999976553
No 54
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=94.00 E-value=0.031 Score=45.80 Aligned_cols=43 Identities=19% Similarity=0.240 Sum_probs=37.1
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
-.++||.|+|.|-|.-+|+-++..|.++|++|.++.+....++
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 52 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLA 52 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHH
Confidence 3578999999999999999999999999999999876544443
No 55
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=93.99 E-value=0.076 Score=47.73 Aligned_cols=54 Identities=22% Similarity=0.287 Sum_probs=45.0
Q ss_pred cccCCHHHHHHH----HHHhCC-CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 149 FIPCTPNGVLEL----IKRTNV-TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 149 ~~PcTa~av~~l----L~~~~i-~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
.-++|..|++.. +++.|. +++||+|+|+|-+++ |.-++..|...||.|.++.+.
T Consensus 149 ~~~aTg~Gv~~~~~~~~~~~G~~~L~GktV~I~G~GnV-G~~~A~~l~~~GakVvvsD~~ 207 (355)
T 1c1d_A 149 SAFTTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAV-GGSLASLAAEAGAQLLVADTD 207 (355)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSC
T ss_pred chhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEEeCC
Confidence 446899988765 455688 899999999997665 999999999999999977643
No 56
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=93.97 E-value=0.045 Score=46.96 Aligned_cols=44 Identities=18% Similarity=0.316 Sum_probs=38.9
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHH
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQD 209 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~ 209 (216)
.+++||.|+|.|-|.-+|+-++..|.++|+.|.++.+....+++
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 80 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSS 80 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 46899999999999999999999999999999999876555544
No 57
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=93.93 E-value=0.076 Score=45.58 Aligned_cols=49 Identities=33% Similarity=0.428 Sum_probs=40.3
Q ss_pred HHHHHH-HHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 154 PNGVLE-LIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 154 a~av~~-lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+..++. +|.+++.++.||+|.|||-+. +|+.++..|...|+.|+++...
T Consensus 138 ae~a~~~~l~~~~~~l~g~~v~IiG~G~-iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 138 AEGTIMMAIQHTDFTIHGANVAVLGLGR-VGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp HHHHHHHHHHHCSSCSTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEEeeCH-HHHHHHHHHHhCCCEEEEEECC
Confidence 344443 556678899999999999765 6999999999999999998764
No 58
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=93.84 E-value=0.35 Score=42.87 Aligned_cols=137 Identities=9% Similarity=0.017 Sum_probs=92.6
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCC-----CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCH
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRS-----ITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINA 117 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~-----~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~ 117 (216)
.++.+... .|-.---+=.-++.++|.++....-... .|-+|-...+..+ +|+|++-.|- |-..
T Consensus 48 ~l~~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~-----~D~iviR~~~----~~~~ 115 (321)
T 1oth_A 48 SLGMIFEK---RSTRTRLSTETGFALLGGHPCFLTTQDIHLGVNESLTDTARVLSSM-----ADAVLARVYK----QSDL 115 (321)
T ss_dssp EEEEEESS---CCSHHHHHHHHHHHHTTCEEEEEETTTSCBTTTBCHHHHHHHHHHH-----CSEEEEECSC----HHHH
T ss_pred EEEEEecC---CCcchHHHHHHHHHHcCCeEEEECCCcCcCCCCCCHHHHHHHHHHh-----CCEEEEeCCC----hhHH
Confidence 35555543 3322223347789999999977753321 2556666666666 5788887664 3333
Q ss_pred HHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCE
Q psy7981 118 MLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHAT 196 (216)
Q Consensus 118 ~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AT 196 (216)
+.+.+.. ++-.+|.| + ....||=+++ ++.+.++.| .++|++|++||-.+.|.+.+...|..-|+.
T Consensus 116 ~~lA~~~-------~vPVINa~----~--~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~va~Sl~~~~~~~G~~ 181 (321)
T 1oth_A 116 DTLAKEA-------SIPIINGL----S--DLYHPIQILADYLTLQEHYS-SLKGLTLSWIGDGNNILHSIMMSAAKFGMH 181 (321)
T ss_dssp HHHHHHC-------SSCEEESC----C--SSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCSSHHHHHHHTTTGGGTCE
T ss_pred HHHHHhC-------CCCEEcCC----C--CCCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCchhhHHHHHHHHHHcCCe
Confidence 4443332 23456743 1 3678998888 566666666 799999999999888899998888888999
Q ss_pred EEEecCCCC
Q psy7981 197 VTVCHSKTK 205 (216)
Q Consensus 197 Vtichs~T~ 205 (216)
|++|.=.+-
T Consensus 182 v~~~~P~~~ 190 (321)
T 1oth_A 182 LQAATPKGY 190 (321)
T ss_dssp EEEECCTTC
T ss_pred EEEECCccc
Confidence 999987664
No 59
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=93.80 E-value=0.055 Score=44.43 Aligned_cols=42 Identities=14% Similarity=0.212 Sum_probs=36.8
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
.+++||+|+|.|.|.-+|+-++..|+++|++|+++.+.....
T Consensus 10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~ 51 (265)
T 1h5q_A 10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADA 51 (265)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhh
Confidence 357899999999999999999999999999999987754443
No 60
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=93.79 E-value=0.52 Score=41.85 Aligned_cols=139 Identities=14% Similarity=0.085 Sum_probs=92.6
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHH
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSI---TEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAML 119 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~---~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~ 119 (216)
.++.+... .|-.---+=..++.++|.++....- .++ .-|-+.+.++-|+.= +|+|++--|- +-..+.
T Consensus 50 ~la~lF~e---~STRTR~SFE~A~~~LGg~~i~l~~-~~ss~~kgEsl~DTarvLs~~--~D~iviR~~~----~~~~~~ 119 (323)
T 3gd5_A 50 VLGLVFLK---ASTRTRVSFTVAMYQLGGQVIDLSP-SNTQVGRGEPVRDTARVLGRY--VDGLAIRTFA----QTELEE 119 (323)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEC-----------CCHHHHHHHHTTT--CSEEEEECSS----HHHHHH
T ss_pred EEEEEecC---CCcchHhhHHHHHHHcCCeEEEeCc-ccccCCCCCCHHHHHHHHHHh--CCEEEEecCC----hhHHHH
Confidence 44555443 3333333447889999998876532 221 234577777777665 8899998764 333334
Q ss_pred HhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEE
Q psy7981 120 VTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVT 198 (216)
Q Consensus 120 i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVt 198 (216)
+.+.. ++-.+|.|- ....||=+++ ++.+.+++| +++|++|++||-.+.|.+.+..++..-|++|+
T Consensus 120 lA~~~-------~vPVINag~------~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~ 185 (323)
T 3gd5_A 120 YAHYA-------GIPVINALT------DHEHPCQVVADLLTIRENFG-RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIA 185 (323)
T ss_dssp HHHHH-------CSCEEEEEC------SSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEE
T ss_pred HHHhC-------CCCEEeCCC------CCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEE
Confidence 43332 233467642 2678998888 667777777 69999999999999999999999988899999
Q ss_pred EecCCCC
Q psy7981 199 VCHSKTK 205 (216)
Q Consensus 199 ichs~T~ 205 (216)
+|.=.+-
T Consensus 186 ~~~P~~~ 192 (323)
T 3gd5_A 186 VATPEGF 192 (323)
T ss_dssp EECCTTC
T ss_pred EECCCcc
Confidence 9976553
No 61
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=93.79 E-value=0.03 Score=47.05 Aligned_cols=44 Identities=16% Similarity=0.190 Sum_probs=37.6
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHH
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQD 209 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~ 209 (216)
.+++||.|+|.|-|.-+|+-++..|+++|++|.++.+....+++
T Consensus 26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~ 69 (281)
T 3ppi_A 26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKA 69 (281)
T ss_dssp GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Confidence 35789999999999999999999999999999998765443433
No 62
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=93.77 E-value=0.034 Score=45.65 Aligned_cols=45 Identities=20% Similarity=0.376 Sum_probs=38.7
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHH
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQD 209 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~ 209 (216)
..+++||+|+|.|-|.-+|+-++..|+++|++|.++.+....+++
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~ 53 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKS 53 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 457899999999999999999999999999999998775444443
No 63
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=93.71 E-value=0.41 Score=42.49 Aligned_cols=139 Identities=14% Similarity=0.096 Sum_probs=91.9
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCC--CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHH
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSI--TEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLV 120 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~--~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i 120 (216)
.++.+... .|-.---+=.-++.++|.++....-.... .-|-+.++++-|+.= +|+|.+--|- +-..+.+
T Consensus 60 ~la~lF~e---pSTRTR~SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~--~D~iviR~~~----~~~~~~l 130 (325)
T 1vlv_A 60 TLAMIFEK---RSTRTRLAFETAFAEEGGHPIFLSPNDIHLGAKESLEDTARVLGRM--VDAIMFRGYK----QETVEKL 130 (325)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHTT--CSEEEEESSC----HHHHHHH
T ss_pred EEEEEecc---CCcchHHHHHHHHHHcCCeEEEECCccccCCCCcCHHHHHHHHHHh--CCEEEEECCC----hHHHHHH
Confidence 35555543 33333334578899999998777532211 123455555555544 6899988664 3333444
Q ss_pred hhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEecCC-CcccHHHHHHhhhCCCEEE
Q psy7981 121 TDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIAGTNAVVLGRS-KIVGTPAAELLKWKHATVT 198 (216)
Q Consensus 121 ~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~Gk~vvViGrS-~~VG~Pla~lL~~~~ATVt 198 (216)
.+.. ++-.+|.|- ....||=+++ ++.+.++.| +++|++|++||-. +.|.+.+...|..-|+.|+
T Consensus 131 A~~~-------~vPVINa~~------~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~ 196 (325)
T 1vlv_A 131 AEYS-------GVPVYNGLT------DEFHPTQALADLMTIEENFG-RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFV 196 (325)
T ss_dssp HHHH-------CSCEEESCC------SSCCHHHHHHHHHHHHHHHS-CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEE
T ss_pred HHhC-------CCCEEeCCC------CCCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEE
Confidence 4332 234566321 2678998888 556666666 7999999999986 7789999999999999999
Q ss_pred EecCCC
Q psy7981 199 VCHSKT 204 (216)
Q Consensus 199 ichs~T 204 (216)
+|.=.+
T Consensus 197 ~~~P~~ 202 (325)
T 1vlv_A 197 ACGPEE 202 (325)
T ss_dssp EESCGG
T ss_pred EECCcc
Confidence 997655
No 64
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=93.69 E-value=0.044 Score=46.02 Aligned_cols=44 Identities=18% Similarity=0.154 Sum_probs=35.5
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHH
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQD 209 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~ 209 (216)
.+++||.|+|.|-|.-+|+-++..|.++|++|.++......+.+
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 66 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVT 66 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH
Confidence 45789999999999999999999999999999999876554433
No 65
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=93.69 E-value=0.065 Score=44.70 Aligned_cols=55 Identities=25% Similarity=0.262 Sum_probs=43.0
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
.-||+....+.+ .+++||+|+|.|.|.-+|+-++..|+++|+.|+++......++
T Consensus 18 ~~~~~~~~~~~~-----~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~ 72 (279)
T 3ctm_A 18 KAPTLSKNVLDL-----FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADE 72 (279)
T ss_dssp CCCCCCSSGGGG-----GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHH
T ss_pred Cccccccccccc-----cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 345544434443 3578999999999999999999999999999999877665544
No 66
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=93.63 E-value=0.044 Score=46.01 Aligned_cols=40 Identities=25% Similarity=0.219 Sum_probs=35.8
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..++.||.|+|.|.|.-+|+-++..|.++|++|.++.+..
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 55 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNL 55 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4578999999999999999999999999999999987643
No 67
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=93.63 E-value=0.038 Score=46.53 Aligned_cols=45 Identities=18% Similarity=0.351 Sum_probs=38.3
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHHH
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQDV 210 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~~ 210 (216)
.+++||+|+|.|-|.-+|+-++..|.++|+.|.++.+....+++.
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~ 67 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEI 67 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 468999999999999999999999999999999987654444443
No 68
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=93.58 E-value=0.48 Score=42.74 Aligned_cols=121 Identities=12% Similarity=0.135 Sum_probs=86.0
Q ss_pred HHHHHHHHcCcceEEEe-----CCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCCc
Q psy7981 61 MKMKAAKEIGIDAQHVK-----LPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLNT 135 (216)
Q Consensus 61 ~k~k~a~~~Gi~~~~~~-----l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~~ 135 (216)
+=..++.++|..+.... +....|-+|-...+..+ +|+|.+--|- +-..+.+.+.. ++-.
T Consensus 88 SFE~A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~~-----~D~IviR~~~----~~~~~~lA~~s-------~vPV 151 (365)
T 4amu_A 88 AFEVAASDLGAGVTYIGPSGSNMGKKESIEDTAKVLGRF-----YDGIEFRGFA----QSDVDALVKYS-------GVPV 151 (365)
T ss_dssp HHHHHHHHHTCEEEEECHHHHCCSSSSCHHHHHHHHHHH-----CSEEEEECSC----HHHHHHHHHHH-------CSCE
T ss_pred HHHHHHHhCCCEEEEcCCccccCCCCcCHHHHHHHHHhh-----CcEEEEecCC----hhHHHHHHHhC-------CCCE
Confidence 44778999999988653 23344566666666666 6799887653 33334443332 2345
Q ss_pred cchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEecCC-CcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 136 INEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIAGTNAVVLGRS-KIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 136 ~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~Gk~vvViGrS-~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+|.| + ..+.||=+++ ++.+.+++| .++|++|++||-. +.|...+..++..-|+.|++|.=.+
T Consensus 152 INa~----~--~~~HPtQaLaDl~Ti~E~~G-~l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~ 215 (365)
T 4amu_A 152 WNGL----T--DDEHPTQIIADFMTMKEKFG-NLKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDN 215 (365)
T ss_dssp EEEE----C--SSCCHHHHHHHHHHHHHHHS-SCTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGG
T ss_pred EeCC----C--CCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCcc
Confidence 6753 2 3678998888 667777777 4999999999987 6788999999988999999996544
No 69
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=93.58 E-value=0.046 Score=45.81 Aligned_cols=42 Identities=10% Similarity=0.175 Sum_probs=36.7
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
.++.||+|+|.|-|.-+|+-++..|.++|++|+++......+
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~ 68 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGL 68 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHH
Confidence 457999999999999999999999999999999987654333
No 70
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=93.56 E-value=0.052 Score=45.94 Aligned_cols=44 Identities=23% Similarity=0.246 Sum_probs=37.6
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHH
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQD 209 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~ 209 (216)
.+++||.|+|.|-|.-+|+-++..|.++|++|.++.+....+++
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~ 55 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEA 55 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 46899999999999999999999999999999998765444443
No 71
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=93.55 E-value=0.34 Score=43.59 Aligned_cols=141 Identities=10% Similarity=0.051 Sum_probs=94.3
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHH
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSI---TEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAML 119 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~---~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~ 119 (216)
.++.+..- .|-----+=..++.++|.++....- .++ .-|-+.+.++-|+.= +|+|++--|- +-..+.
T Consensus 43 ~la~lF~e---pSTRTR~SFE~A~~~LGg~vi~l~~-~~ssl~kgEsl~DTarvLs~y--~D~IviR~~~----~~~~~~ 112 (355)
T 4a8p_A 43 SLGMIFQQ---SSTRTRVSFETAMEQLGGHGEYLAP-GQIQLGGHETIEDTSRVLSRL--VDILMARVER----HHSIVD 112 (355)
T ss_dssp EEEEEESS---CCSHHHHHHHHHHHHTTCEEEEECB-TTBCBTTTBCHHHHHHHHTTT--CSEEEEECSS----HHHHHH
T ss_pred EEEEEecC---CChhhHhhHHHHHHHcCCeEEEeCc-ccccCCCCcCHHHHHHHHHHh--CCEEEEecCc----HHHHHH
Confidence 45555443 2222222347889999999886642 221 234566677777655 8899987663 333334
Q ss_pred HhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHh--CCCCCCCeEEEecCCCcccHHHHHHhhhCCCE
Q psy7981 120 VTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRT--NVTIAGTNAVVLGRSKIVGTPAAELLKWKHAT 196 (216)
Q Consensus 120 i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~--~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AT 196 (216)
+.+.. ++-.+|.|- ....||=+++ ++.+.+++ |-+++|++|++||-.+.|.+.+..+|..-|++
T Consensus 113 lA~~~-------~vPVINag~------~~~HPtQaLaDl~TI~E~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~ 179 (355)
T 4a8p_A 113 LANCA-------TIPVINGMS------DYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMN 179 (355)
T ss_dssp HHHHC-------SSCEEECCC------SSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESCCCHHHHHHHHHHHHTTCE
T ss_pred HHHhC-------CCCEEeCCC------CCCCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCE
Confidence 43332 234567541 2678998888 56666666 54789999999999999999999999999999
Q ss_pred EEEecCCCCC
Q psy7981 197 VTVCHSKTKN 206 (216)
Q Consensus 197 Vtichs~T~~ 206 (216)
|++|.=.+-.
T Consensus 180 v~~~~P~~~~ 189 (355)
T 4a8p_A 180 FVHFGPEGFQ 189 (355)
T ss_dssp EEEECCTTSS
T ss_pred EEEECCCccC
Confidence 9999766533
No 72
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=93.55 E-value=0.054 Score=45.32 Aligned_cols=42 Identities=21% Similarity=0.252 Sum_probs=37.2
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKN 206 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~ 206 (216)
..+++||+|+|.|-+.-+|+-++..|.++|++|.++.....+
T Consensus 24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~ 65 (271)
T 4iin_A 24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAE 65 (271)
T ss_dssp CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 467899999999999999999999999999999988765443
No 73
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=93.51 E-value=0.049 Score=45.20 Aligned_cols=39 Identities=18% Similarity=0.236 Sum_probs=35.3
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.+++||+|+|.|-|.-+|+-++..|.++|++|.++.+..
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 50 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIAD 50 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCh
Confidence 357899999999999999999999999999999987643
No 74
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=93.51 E-value=0.069 Score=49.13 Aligned_cols=54 Identities=26% Similarity=0.113 Sum_probs=45.5
Q ss_pred cccCCHHHHHHHH----HHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEE-EecCC
Q psy7981 149 FIPCTPNGVLELI----KRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVT-VCHSK 203 (216)
Q Consensus 149 ~~PcTa~av~~lL----~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVt-ichs~ 203 (216)
.-+.|+.|++..+ ++.|.+++||+|+|.|-+ .||.-++.+|.+.||+|. ++.+.
T Consensus 185 r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~G-nVG~~aa~~L~e~GakVVavsD~~ 243 (421)
T 1v9l_A 185 REYATGFGVAVATREMAKKLWGGIEGKTVAIQGMG-NVGRWTAYWLEKMGAKVIAVSDIN 243 (421)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHSCCTTCEEEEECCS-HHHHHHHHHHHTTTCEEEEEECSS
T ss_pred cccchHHHHHHHHHHHHHhcCCCcCCCEEEEECcC-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 4568999988665 557899999999999965 789999999999999987 77763
No 75
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=93.51 E-value=0.04 Score=46.22 Aligned_cols=42 Identities=17% Similarity=0.300 Sum_probs=36.8
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
+++||.|+|.|-|.-+|+-++..|.++||.|.++.+....++
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 58 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELD 58 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 589999999999999999999999999999999876544343
No 76
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=93.47 E-value=0.042 Score=46.62 Aligned_cols=43 Identities=21% Similarity=0.201 Sum_probs=36.1
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
.+++||.|+|.|-|.-+|+-++..|.++|++|.++.+....++
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~ 67 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAAD 67 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4689999999999999999999999999999999876543333
No 77
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=93.47 E-value=0.044 Score=45.93 Aligned_cols=41 Identities=27% Similarity=0.258 Sum_probs=35.8
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
+++||.|+|.|-|.-+|+-++..|+++|++|+++.+....+
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~ 69 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNI 69 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHH
Confidence 36899999999999999999999999999999987654333
No 78
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=93.47 E-value=0.043 Score=45.53 Aligned_cols=42 Identities=24% Similarity=0.256 Sum_probs=36.4
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
.++.||.|+|.|.|.-+|+-++..|.++|+.|.++.+....+
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 51 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENV 51 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 357899999999999999999999999999999987654333
No 79
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=93.46 E-value=0.039 Score=46.59 Aligned_cols=42 Identities=24% Similarity=0.331 Sum_probs=36.7
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
.+++||.|+|.|-|.-+|+-++..|.++|+.|.++......+
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~ 63 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRV 63 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 468999999999999999999999999999999987644333
No 80
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=93.45 E-value=0.049 Score=46.62 Aligned_cols=43 Identities=19% Similarity=0.283 Sum_probs=37.6
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHH
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQD 209 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~ 209 (216)
+++||.|+|.|-|.-+|+-++..|.++|++|.++.+....+++
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~ 70 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQ 70 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 4799999999999999999999999999999999776544443
No 81
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=93.45 E-value=0.05 Score=45.69 Aligned_cols=42 Identities=33% Similarity=0.401 Sum_probs=36.8
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
.+++||.|+|.|.|.-+|+-++..|.++|++|.++.+....+
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~ 58 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKEL 58 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 468999999999999999999999999999999987654333
No 82
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=93.43 E-value=0.042 Score=45.48 Aligned_cols=42 Identities=17% Similarity=0.263 Sum_probs=36.6
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
.+++||+|+|.|-|.-+|+-++..|+++|+.|+++.+....+
T Consensus 10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~ 51 (266)
T 1xq1_A 10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYEL 51 (266)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 467899999999999999999999999999999987654333
No 83
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=93.38 E-value=0.049 Score=47.01 Aligned_cols=44 Identities=18% Similarity=0.220 Sum_probs=38.3
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHHH
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQDV 210 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~~ 210 (216)
.|+||.|+|-|.|.=+|+-++..|.++||.|.+|......+++.
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~ 69 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAA 69 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 58999999999999999999999999999999998654445443
No 84
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=93.32 E-value=0.078 Score=43.95 Aligned_cols=40 Identities=28% Similarity=0.461 Sum_probs=34.6
Q ss_pred hCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 164 TNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 164 ~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+..+++||+|+|.|.|.-+|+-++..|.++|++|.++.+.
T Consensus 13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~ 52 (249)
T 1o5i_A 13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARN 52 (249)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4567899999999999999999999999999999998654
No 85
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=93.29 E-value=0.054 Score=45.66 Aligned_cols=41 Identities=20% Similarity=0.246 Sum_probs=36.2
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
+++||+|+|.|.|.-+|+-++..|.++|++|+++.+....+
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~ 63 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVL 63 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 57899999999999999999999999999999987654333
No 86
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=93.25 E-value=0.054 Score=45.88 Aligned_cols=43 Identities=21% Similarity=0.248 Sum_probs=37.4
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
.+++||.|+|.|.|.-+|+-++..|.++|+.|.++......+.
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~ 65 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAV 65 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 5689999999999999999999999999999999876543333
No 87
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=93.25 E-value=0.058 Score=45.57 Aligned_cols=39 Identities=31% Similarity=0.377 Sum_probs=35.2
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
+++||.|+|.|.|.-+|+-++..|+++|++|+++.+...
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~ 64 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAE 64 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 578999999999999999999999999999999876433
No 88
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=93.23 E-value=0.11 Score=43.07 Aligned_cols=42 Identities=26% Similarity=0.207 Sum_probs=36.7
Q ss_pred CCCCCCeEEEecCC--CcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 166 VTIAGTNAVVLGRS--KIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 166 i~l~Gk~vvViGrS--~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
.+++||.|+|.|-| .-+|+-++..|.++|+.|.++.......
T Consensus 16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~ 59 (267)
T 3gdg_A 16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQG 59 (267)
T ss_dssp HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSH
T ss_pred cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchh
Confidence 35799999999999 8999999999999999999987665543
No 89
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=93.23 E-value=0.039 Score=46.88 Aligned_cols=44 Identities=20% Similarity=0.192 Sum_probs=33.8
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
..+++||.|+|.|.|.-+|+-++..|.++|++|.++.+....++
T Consensus 28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~ 71 (281)
T 4dry_A 28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLD 71 (281)
T ss_dssp ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 35689999999999999999999999999999999976544443
No 90
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=93.21 E-value=0.072 Score=45.36 Aligned_cols=40 Identities=13% Similarity=0.243 Sum_probs=36.1
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.+++||.|+|.|-|.-+|+-++..|.++|++|.++.....
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 82 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEE 82 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 4689999999999999999999999999999998876543
No 91
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=93.19 E-value=0.057 Score=45.52 Aligned_cols=41 Identities=24% Similarity=0.259 Sum_probs=35.9
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
+++||.|+|.|.|.-+|+-++..|.++|++|.++.+....+
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 59 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGL 59 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 47899999999999999999999999999999987654333
No 92
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=93.19 E-value=0.05 Score=45.31 Aligned_cols=42 Identities=26% Similarity=0.346 Sum_probs=36.4
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
+++||.|+|.|.|.-+|+-++..|+++|+.|.++.+....++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~ 67 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLR 67 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 578999999999999999999999999999999866544443
No 93
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=93.18 E-value=0.059 Score=45.43 Aligned_cols=41 Identities=12% Similarity=0.186 Sum_probs=36.2
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
.++||.|+|.|-|.-+|+-++..|.++|++|.++......+
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~ 64 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRV 64 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 57999999999999999999999999999999987654433
No 94
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=93.14 E-value=0.059 Score=45.55 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=35.3
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..++||+|+|.|.|.-+|+-++..|+++|++|+++.+..
T Consensus 14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~ 52 (303)
T 1yxm_A 14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKL 52 (303)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357899999999999999999999999999999987643
No 95
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=93.12 E-value=0.11 Score=47.68 Aligned_cols=55 Identities=25% Similarity=0.166 Sum_probs=45.3
Q ss_pred CcccCCHHHHHHHH----HHhCCCCCCCeEEEecCCCcccHHHHHHhhh-CCCEEE-EecCC
Q psy7981 148 GFIPCTPNGVLELI----KRTNVTIAGTNAVVLGRSKIVGTPAAELLKW-KHATVT-VCHSK 203 (216)
Q Consensus 148 ~~~PcTa~av~~lL----~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~-~~ATVt-ichs~ 203 (216)
...+.|+.|++..+ ++.|.+++|++|+|.|- ..||.-++.+|.+ +||.|. ++.+.
T Consensus 183 ~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~-GnVG~~~a~~L~e~~GakvVavsD~~ 243 (415)
T 2tmg_A 183 GREEATGRGVKVCAGLAMDVLGIDPKKATVAVQGF-GNVGQFAALLISQELGSKVVAVSDSR 243 (415)
T ss_dssp TTTTHHHHHHHHHHHHHHHHTTCCTTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CcCcchHHHHHHHHHHHHHHcCCCcCCCEEEEECC-cHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 34568999987665 55799999999999995 5679999999998 999987 77663
No 96
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=93.08 E-value=1.8 Score=38.49 Aligned_cols=38 Identities=16% Similarity=0.139 Sum_probs=34.2
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.++.||+|.|||-+.+ |+.++..|...|+.|+.+...
T Consensus 159 ~~~l~gktvGIIG~G~I-G~~vA~~l~~~G~~V~~~dr~ 196 (351)
T 3jtm_A 159 AYDLEGKTIGTVGAGRI-GKLLLQRLKPFGCNLLYHDRL 196 (351)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHGGGCCEEEEECSS
T ss_pred cccccCCEEeEEEeCHH-HHHHHHHHHHCCCEEEEeCCC
Confidence 56899999999999875 999999999999999998754
No 97
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=92.97 E-value=1.5 Score=37.00 Aligned_cols=94 Identities=14% Similarity=0.092 Sum_probs=58.6
Q ss_pred hhcccHH-HHHHHHHHHHHHHHHHHh--------cCCCCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCC
Q psy7981 11 QILSGTA-VSGDIREGLKERVKKLKE--------RLPDFEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPR 80 (216)
Q Consensus 11 ~il~Gk~-vA~~i~~~ik~~v~~l~~--------~~~~~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~ 80 (216)
++|+|++ |+++-++.+.+-+++|-= -..+....+++|.-. .++--..+++...+.|++.|.........
T Consensus 21 rvln~~~~vs~~tr~rV~~aa~~lgY~pn~~ar~l~~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~- 99 (332)
T 2hsg_A 21 RVVNGNPNVKPSTRKKVLETIERLGYRPNAVARGLASKKTTTVGVIIPDISNIFYAELARGIEDIATMYKYNIILSNSD- 99 (332)
T ss_dssp HHHTTCTTSCHHHHHHHHHHHHHHTCCSCHHHHHHTTC-CCEEEEEEC--CCSHHHHHHHHHHHHHHHHTCEEEEEECC-
T ss_pred HHHcCCCCCCHHHHHHHHHHHHHHCCCcCHHHHHHHhCCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEEEEeCC-
Confidence 5788763 677777777666665510 001233456666532 34444556788889999999988776432
Q ss_pred CCCHHHHHHHHHHhcCCCCccEEEEeC
Q psy7981 81 SITEIELLSRLKKLNEDPSVHGIIVQM 107 (216)
Q Consensus 81 ~~~~~el~~~I~~lN~D~~V~GIlvql 107 (216)
.+.++..+.++.+. ...|+||++.-
T Consensus 100 -~~~~~~~~~~~~l~-~~~vdgiI~~~ 124 (332)
T 2hsg_A 100 -QNQDKELHLLNNML-GKQVDGIIFMS 124 (332)
T ss_dssp -SHHHHHHHHHHHTS-CCSSCCEEECC
T ss_pred -CChHHHHHHHHHHH-hCCCcEEEEec
Confidence 23445566777775 45799999863
No 98
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=92.92 E-value=0.069 Score=44.15 Aligned_cols=40 Identities=20% Similarity=0.263 Sum_probs=36.1
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..++.||+|+|.|.|.-+|+-++..|.++|++|.++.+..
T Consensus 10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 49 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS 49 (247)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4568999999999999999999999999999999987654
No 99
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=92.67 E-value=0.09 Score=44.21 Aligned_cols=40 Identities=20% Similarity=0.144 Sum_probs=35.7
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..+++||+|+|.|-|.-+|+-++..|.++|++|.++....
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 48 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDE 48 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4578999999999999999999999999999999986543
No 100
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.64 E-value=0.076 Score=44.63 Aligned_cols=37 Identities=22% Similarity=0.293 Sum_probs=34.6
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
-+++||.|+|.|-|.-+|+-++..|.++|+.|.++..
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 4689999999999999999999999999999999865
No 101
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=92.62 E-value=0.085 Score=44.37 Aligned_cols=41 Identities=24% Similarity=0.221 Sum_probs=36.1
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
..+++||.|+|.|-|.-+|+-++..|.++|++|.++.....
T Consensus 23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~ 63 (269)
T 4dmm_A 23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSA 63 (269)
T ss_dssp -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCCh
Confidence 35789999999999999999999999999999999876443
No 102
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.61 E-value=0.077 Score=44.02 Aligned_cols=42 Identities=14% Similarity=0.209 Sum_probs=35.8
Q ss_pred CCCCCeEEEecCCC-cccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 167 TIAGTNAVVLGRSK-IVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 167 ~l~Gk~vvViGrS~-~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
.++||.|+|.|-|. =+|+-++..|.++|++|.++.+....++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~ 61 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLG 61 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHH
Confidence 57899999999974 6999999999999999999876654444
No 103
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=92.59 E-value=0.33 Score=43.30 Aligned_cols=139 Identities=14% Similarity=0.062 Sum_probs=92.4
Q ss_pred EEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCC--CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHh
Q psy7981 44 LAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSI--TEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVT 121 (216)
Q Consensus 44 LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~--~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~ 121 (216)
++.+..- .|-.---+=.-++.++|.++....-.... .-|-+.+.++-|+.= +|+|.+-.|- +-..+.+.
T Consensus 47 la~lF~e---~STRTR~SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~--~D~IviR~~~----~~~~~~lA 117 (333)
T 1duv_G 47 IALIFEK---DSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRM--YDGIQYRGYG----QEIVETLA 117 (333)
T ss_dssp EEEEESS---CCSHHHHHHHHHHHHTTCEEEEECSSSSCBTTTBCHHHHHHHHTTT--CSEEEEECSC----HHHHHHHH
T ss_pred EEEEecC---CCccHHHHHHHHHHHcCCeEEEECCccccCcCCCcHHHHHHHHHHh--CCEEEEEcCC----chHHHHHH
Confidence 4555543 33222233477899999998777532211 124566666666655 6899987664 33334444
Q ss_pred hhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHH-hCCCCCCCeEEEecCC-CcccHHHHHHhhhCCCEEE
Q psy7981 122 DSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKR-TNVTIAGTNAVVLGRS-KIVGTPAAELLKWKHATVT 198 (216)
Q Consensus 122 ~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~-~~i~l~Gk~vvViGrS-~~VG~Pla~lL~~~~ATVt 198 (216)
+.. ++-.+|.| + ....||=+++ ++.+.++ .|-+++|.+|++||-. +.|.+.+...+..-|+.|+
T Consensus 118 ~~~-------~vPVINa~----~--~~~HPtQ~LaDl~Ti~e~~~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~ 184 (333)
T 1duv_G 118 EYA-------SVPVWNGL----T--NEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLR 184 (333)
T ss_dssp HHH-------SSCEEESC----C--SSCCHHHHHHHHHHHHHHSTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEE
T ss_pred HhC-------CCCeEcCC----C--CCCCchHHHHHHHHHHHHhcCCCCCCcEEEEECCCccchHHHHHHHHHHcCCEEE
Confidence 332 24456742 1 3688998888 5566666 5657999999999987 7889999999988899999
Q ss_pred EecCCC
Q psy7981 199 VCHSKT 204 (216)
Q Consensus 199 ichs~T 204 (216)
+|.=.+
T Consensus 185 ~~~P~~ 190 (333)
T 1duv_G 185 LVAPQA 190 (333)
T ss_dssp EECCGG
T ss_pred EECCcc
Confidence 997655
No 104
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=92.59 E-value=0.066 Score=44.20 Aligned_cols=37 Identities=27% Similarity=0.266 Sum_probs=34.4
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
.+++||+|+|.|.|.-+|+-++..|.++|++|+++..
T Consensus 17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 4578999999999999999999999999999999876
No 105
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=92.58 E-value=0.088 Score=44.09 Aligned_cols=39 Identities=26% Similarity=0.263 Sum_probs=35.3
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
-+++||.|+|.|-|.-+|+-++..|.++|++|.++....
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~ 52 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANS 52 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 368999999999999999999999999999999976554
No 106
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=92.56 E-value=3.1 Score=36.48 Aligned_cols=121 Identities=20% Similarity=0.235 Sum_probs=84.3
Q ss_pred HHHHHHHHcCcceEEEeCC-----CCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCCc
Q psy7981 61 MKMKAAKEIGIDAQHVKLP-----RSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLNT 135 (216)
Q Consensus 61 ~k~k~a~~~Gi~~~~~~l~-----~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~~ 135 (216)
+=..++.++|.++....-. ...|-+|-...+..+. +|+|++-.|- +-..+.+.+.. ++-.
T Consensus 53 SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~----~D~iviR~~~----~~~~~~la~~~-------~vPV 117 (304)
T 3r7f_A 53 SFEVAEKKLGMNVLNLDGTSTSVQKGETLYDTIRTLESIG----VDVCVIRHSE----DEYYEELVSQV-------NIPI 117 (304)
T ss_dssp HHHHHHHHTTCEEEEEETTSTTSCSSSCHHHHHHHHHHHT----CCEEEEECSS----TTCHHHHHHHC-------SSCE
T ss_pred hHHHHHHHCCCeEEEECcccccCCCCCCHHHHHHHHHHhc----CCEEEEecCC----hhHHHHHHHhC-------CCCE
Confidence 4478899999998776432 2234556666666663 4589988774 33444554432 2334
Q ss_pred cchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEecCCC--cccHHHHHHhhhCCCEEEEecC
Q psy7981 136 INEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIAGTNAVVLGRSK--IVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 136 ~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~Gk~vvViGrS~--~VG~Pla~lL~~~~ATVtichs 202 (216)
+|.|- | ....||=+++ ++.+.+++| +++|++|++||-.. .|.+.+..++..-|+.|++|.=
T Consensus 118 INagd---g--~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P 181 (304)
T 3r7f_A 118 LNAGD---G--CGQHPTQSLLDLMTIYEEFN-TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGP 181 (304)
T ss_dssp EESCC---T--TSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESC
T ss_pred EeCCC---C--CCcCcHHHHHHHHHHHHHhC-CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECC
Confidence 66421 1 3688998888 566777777 69999999999863 5889999999999999999953
No 107
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=92.52 E-value=1.6 Score=38.70 Aligned_cols=140 Identities=11% Similarity=-0.027 Sum_probs=92.8
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHH
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSI---TEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAML 119 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~---~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~ 119 (216)
.++.+..- .|-.---+=..++.++|.++...+|..++ .-|-+.+.++-|+.= +|+|.+-.|- |-..+.
T Consensus 46 ~la~lF~e---~STRTR~SFE~A~~~LGg~~i~~~l~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~----~~~~~~ 116 (328)
T 3grf_A 46 TLLAFFAK---PSLRTRVSLETAMTRLGGHAIYYELGANSNVGGKETVQDTAEVFSRM--VDICTARLAT----KEMMRE 116 (328)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHHTCEEEEEEC----------CHHHHHHHHTTT--CSEEEEECSS----HHHHHH
T ss_pred EEEEEecC---CCchHHHHHHHHHHHCCCeEEccccCccccCCCCCCHHHHHHHHHhh--CCEEEEecCC----hhHHHH
Confidence 45555443 33333334478899999999885565422 134577777777665 7899998663 333344
Q ss_pred HhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCC------CCCCCeEEEecCC-CcccHHHHHHhh
Q psy7981 120 VTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNV------TIAGTNAVVLGRS-KIVGTPAAELLK 191 (216)
Q Consensus 120 i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i------~l~Gk~vvViGrS-~~VG~Pla~lL~ 191 (216)
+.+.. + +-.+|.|- ....||=+++ ++.+.+++|- .++|++|++||-. +.|.+.+..+|.
T Consensus 117 lA~~~----~---vPVINag~------~~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~~~~va~Sl~~~~~ 183 (328)
T 3grf_A 117 MAQHA----S---VPCINALD------DFGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDSMNNVTYDLMRGCA 183 (328)
T ss_dssp HHHHC----S---SCEEESSC------SSCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCCSSHHHHHHHHHHH
T ss_pred HHHhC----C---CCEEeCCC------CCCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCCCcchHHHHHHHHH
Confidence 44333 2 33566532 2678998888 6677777772 6899999999987 778888988888
Q ss_pred hCCCEEEEecCCC
Q psy7981 192 WKHATVTVCHSKT 204 (216)
Q Consensus 192 ~~~ATVtichs~T 204 (216)
.-|+.|++|+=.+
T Consensus 184 ~~G~~v~~~~P~~ 196 (328)
T 3grf_A 184 LLGMECHVCCPDH 196 (328)
T ss_dssp HHTCEEEEECCSS
T ss_pred HcCCEEEEECChH
Confidence 8899999997554
No 108
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=92.52 E-value=0.13 Score=42.32 Aligned_cols=40 Identities=13% Similarity=0.070 Sum_probs=35.7
Q ss_pred CCCCCCCeEEEecCC--CcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRS--KIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS--~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..+++||+|+|.|-+ .-+|+-++..|.++|+.|.++....
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~ 50 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD 50 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch
Confidence 457799999999988 8999999999999999999987653
No 109
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=92.42 E-value=0.082 Score=45.12 Aligned_cols=39 Identities=23% Similarity=0.209 Sum_probs=35.3
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.+++||.|+|.|.|.-+|+-++..|+++|++|.++.+..
T Consensus 30 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~ 68 (291)
T 3cxt_A 30 FSLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQ 68 (291)
T ss_dssp GCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 358999999999999999999999999999999987643
No 110
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=92.41 E-value=0.11 Score=43.68 Aligned_cols=40 Identities=28% Similarity=0.409 Sum_probs=36.0
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..+++||.|+|.|-|.-+|+-++..|.++|++|.++....
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~ 65 (271)
T 3v2g_A 26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNA 65 (271)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4578999999999999999999999999999999985544
No 111
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=92.39 E-value=0.079 Score=44.97 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=36.0
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHH
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQD 209 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~ 209 (216)
.++.||.|+|.|-|.-+|+-++..|.++|++|.++.+....+++
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 67 (283)
T 3v8b_A 24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEE 67 (283)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 35789999999999999999999999999999999765444443
No 112
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=92.39 E-value=0.07 Score=45.01 Aligned_cols=43 Identities=23% Similarity=0.200 Sum_probs=37.2
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
.+++||.|+|.|-|.-+|+-++..|.++|+.|.++.+....++
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~ 66 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAE 66 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4689999999999999999999999999999999876543333
No 113
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.31 E-value=0.073 Score=45.53 Aligned_cols=41 Identities=22% Similarity=0.379 Sum_probs=35.9
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
+++||.|+|.|-|.-+|+-++..|.++|++|+++.+....+
T Consensus 23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~ 63 (297)
T 1xhl_A 23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRL 63 (297)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 47899999999999999999999999999999987644333
No 114
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=92.27 E-value=0.12 Score=43.65 Aligned_cols=39 Identities=18% Similarity=0.185 Sum_probs=35.1
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.++.||.|+|.|-|.-+|+-++..|+++|++|.++....
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~ 59 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGA 59 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 368899999999999999999999999999999987644
No 115
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=92.25 E-value=0.74 Score=39.03 Aligned_cols=93 Identities=16% Similarity=0.122 Sum_probs=42.0
Q ss_pred hhcccH-HHHHHHHHHHHHHHHHHHhc--------CCCCCceEEEEEeC---CCcchHHHHHHHHHHHHHcCcceEEEeC
Q psy7981 11 QILSGT-AVSGDIREGLKERVKKLKER--------LPDFEPGLAIVQVG---GREDSNVYIRMKMKAAKEIGIDAQHVKL 78 (216)
Q Consensus 11 ~il~Gk-~vA~~i~~~ik~~v~~l~~~--------~~~~~P~LaiI~vg---~~~as~~Yv~~k~k~a~~~Gi~~~~~~l 78 (216)
++|+|+ .|+++-++.+.+.+++|-=. ..+....+++|.-. .++--...++...+.|++.|.++.....
T Consensus 22 rvln~~~~vs~~tr~rV~~~a~~lgY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 101 (338)
T 3dbi_A 22 RVLSGNGYVSQETKDRVFQAVEESGYRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADG 101 (338)
T ss_dssp --------------------------------------CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHCCCcCHHHHHhhhCCCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 578885 35555555555444443100 01223456666654 3444455678889999999999887764
Q ss_pred CCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 79 PRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 79 ~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
.. +.+.-.+.++.+.. ..|+||++.
T Consensus 102 ~~--~~~~~~~~~~~l~~-~~vdgiIi~ 126 (338)
T 3dbi_A 102 KH--SAEEERQAIQYLLD-LRCDAIMIY 126 (338)
T ss_dssp TT--SHHHHHHHHHHHHH-TTCSEEEEC
T ss_pred CC--ChHHHHHHHHHHHh-CCCCEEEEe
Confidence 33 34444555555543 379999995
No 116
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=92.25 E-value=0.088 Score=44.35 Aligned_cols=38 Identities=18% Similarity=0.161 Sum_probs=34.6
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
..++||.|+|.|.|.-+|+-++..|+++|++|.++.+.
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 77 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT 77 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCC
Confidence 56789999999999999999999999999999997643
No 117
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=92.23 E-value=0.07 Score=45.03 Aligned_cols=38 Identities=24% Similarity=0.256 Sum_probs=33.8
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+++||.|+|.|.|.-+|+-++..|.++|++|.++....
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~ 57 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNS 57 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 57899999999999999999999999999999987654
No 118
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=92.21 E-value=0.12 Score=43.07 Aligned_cols=39 Identities=13% Similarity=0.118 Sum_probs=33.5
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.++.||.|+|.|-|.-+|+-++..|.++|++|.++.+..
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 55 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSG 55 (253)
T ss_dssp ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 457899999999999999999999999999999987643
No 119
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=92.18 E-value=0.069 Score=45.15 Aligned_cols=43 Identities=21% Similarity=0.190 Sum_probs=34.9
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHH
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQD 209 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~ 209 (216)
++.||.|+|.|-|.-+|+-++..|.++|++|.++.+....+++
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 67 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQE 67 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 4689999999999999999999999999999998765444443
No 120
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=92.16 E-value=0.12 Score=43.40 Aligned_cols=39 Identities=23% Similarity=0.265 Sum_probs=34.9
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
+++||.|+|.|-|.-+|+-++..|.++|++|.++.....
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~ 63 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVA 63 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 578999999999999999999999999999999876543
No 121
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=92.16 E-value=0.13 Score=44.34 Aligned_cols=37 Identities=22% Similarity=0.209 Sum_probs=34.4
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
.++||.|+|.|-|.-+|+-++..|.++|++|.++...
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~ 60 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG 60 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCc
Confidence 4789999999999999999999999999999998754
No 122
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=92.14 E-value=1.4 Score=38.46 Aligned_cols=130 Identities=20% Similarity=0.214 Sum_probs=88.0
Q ss_pred chHHHHHHHHHHHHHcCcceEEEeCCC-----CCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCC
Q psy7981 54 DSNVYIRMKMKAAKEIGIDAQHVKLPR-----SITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEK 128 (216)
Q Consensus 54 as~~Yv~~k~k~a~~~Gi~~~~~~l~~-----~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~K 128 (216)
.|-.---+=.-++.++|.++....-.. ..|-+|-...+..+. +|+|.+-.|- ...+.+. +.+..
T Consensus 44 ~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~----~D~iviR~~~--~~~~~~~-la~~~---- 112 (291)
T 3d6n_B 44 PSTRTRLSFEKAARELGIETYLVSGSESSTVKGESFFDTLKTFEGLG----FDYVVFRVPF--VFFPYKE-IVKSL---- 112 (291)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEETTTTSCCTTCCHHHHHHHHHHTT----CSEEEEEESS--CCCSCHH-HHHTC----
T ss_pred CCccHHHHHHHHHHHhCCeEEEECCccCcccCCCcHHHHHHHHHHhc----CCEEEEEcCC--hHHHHHH-HHHhC----
Confidence 333333345788999999988776332 124555555555552 3699998886 4444431 33322
Q ss_pred CcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEecC--CCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 129 DVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIAGTNAVVLGR--SKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 129 DVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~Gk~vvViGr--S~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+ +-.+|.|. | ....||=+++ ++.+.++.| +++|++|++||- .+.|.+.+...|..-|+.|++|+=.
T Consensus 113 ~---vPVINAG~---g--~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~ 181 (291)
T 3d6n_B 113 N---LRLVNAGD---G--THQHPSQGLIDFFTIKEHFG-EVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPK 181 (291)
T ss_dssp S---SEEEEEEE---T--TTBCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCG
T ss_pred C---CCEEeCcc---C--CCcCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCc
Confidence 1 23456432 1 3688998888 556666666 799999999998 8889999999999999999999743
No 123
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.09 E-value=0.089 Score=39.93 Aligned_cols=47 Identities=17% Similarity=0.432 Sum_probs=39.0
Q ss_pred CCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 152 CTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 152 cTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+++...+++++... |++|+|||- ..+|+.++..|...|+.|+++...
T Consensus 7 sv~~~a~~~~~~~~----~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 7 SIPSIVYDIVRKNG----GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp SHHHHHHHHHHHHC----CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESC
T ss_pred cHHHHHHHHHHhcc----CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCC
Confidence 46677778887664 999999996 567999999999999999888754
No 124
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=92.06 E-value=0.077 Score=44.65 Aligned_cols=42 Identities=29% Similarity=0.318 Sum_probs=36.1
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
.+.||+|+|.|.|.-+|+-++..|.++|++|.++.+....++
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~ 66 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQ 66 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 368999999999999999999999999999999876543343
No 125
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=92.06 E-value=0.16 Score=46.58 Aligned_cols=52 Identities=21% Similarity=0.213 Sum_probs=44.1
Q ss_pred CcccCCHHHHHHHH----HHhCCC-CCCCeEEEecCCCcccHHHHHHhhh-CCCEEEEe
Q psy7981 148 GFIPCTPNGVLELI----KRTNVT-IAGTNAVVLGRSKIVGTPAAELLKW-KHATVTVC 200 (216)
Q Consensus 148 ~~~PcTa~av~~lL----~~~~i~-l~Gk~vvViGrS~~VG~Pla~lL~~-~~ATVtic 200 (216)
..-++|+.|++..+ ++.|.+ ++||+|.|+|-++ ||+-++.+|.. .|+.|..+
T Consensus 185 ~~~~aTg~Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~-VG~~vA~~l~~~~G~kVv~~ 242 (419)
T 1gtm_A 185 GRIEATARGASYTIREAAKVLGWDTLKGKTIAIQGYGN-AGYYLAKIMSEDFGMKVVAV 242 (419)
T ss_dssp TTTTHHHHHHHHHHHHHHHHTTCSCSTTCEEEEECCSH-HHHHHHHHHHHTTCCEEEEE
T ss_pred CCCcchhhHHHHHHHHHHHHhCCcccCCCEEEEEcCCH-HHHHHHHHHHHhcCCEEEEE
Confidence 34579999987665 457999 9999999999865 59999999999 99999876
No 126
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=92.03 E-value=0.16 Score=46.03 Aligned_cols=45 Identities=22% Similarity=0.335 Sum_probs=38.3
Q ss_pred HHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 157 VLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 157 v~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
++.+.++++.++.||+|.|||-+.+ |++++..|...|+.|+.|..
T Consensus 103 lL~l~r~~~~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~d~ 147 (380)
T 2o4c_A 103 LLAMAEVRGADLAERTYGVVGAGQV-GGRLVEVLRGLGWKVLVCDP 147 (380)
T ss_dssp HHHHHHHHTCCGGGCEEEEECCSHH-HHHHHHHHHHTTCEEEEECH
T ss_pred HHHHHhhhhcccCCCEEEEEeCCHH-HHHHHHHHHHCCCEEEEEcC
Confidence 3445566789999999999997765 99999999999999999863
No 127
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=92.02 E-value=0.15 Score=42.80 Aligned_cols=38 Identities=13% Similarity=0.144 Sum_probs=34.2
Q ss_pred CCCCCeEEEecCCCc--ccHHHHHHhhhCCCEEEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKI--VGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~--VG~Pla~lL~~~~ATVtichs~T 204 (216)
.++||.|+|.|.|.. +|+-++..|.++|+.|.++....
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 478999999999866 99999999999999999987665
No 128
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=92.01 E-value=0.16 Score=43.43 Aligned_cols=39 Identities=10% Similarity=0.028 Sum_probs=35.4
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.++.|++|+|.|.+..+|+-++..|+++|++|+++....
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 468899999999999999999999999999999987643
No 129
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=91.89 E-value=6.1 Score=34.57 Aligned_cols=137 Identities=17% Similarity=0.127 Sum_probs=91.5
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCC------CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCC
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRS------ITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDIN 116 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~------~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id 116 (216)
.++.+..- .|-.---+=..++.++|.++....-+.+ .|.+|-...+..+ +|+|++-.|- |-.
T Consensus 42 ~la~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~~ss~~kgEsl~DTarvls~~-----~D~iviR~~~----~~~ 109 (306)
T 4ekn_B 42 ILATVFYE---PSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGY-----ADIIVLRHPS----EGA 109 (306)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECCCTTTTSSSSCCHHHHHHHHHHH-----CSEEEEECSS----TTH
T ss_pred eEEEEEcC---CChhHHhhHHHHHHHcCCEEEEcCCcccccCCCCCCHHHHHHHHHHh-----CcEEEEEcCC----hHH
Confidence 45555544 3433333447889999998876642122 2456666666666 5799998775 333
Q ss_pred HHHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEecCC--CcccHHHHHHhhhC
Q psy7981 117 AMLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIAGTNAVVLGRS--KIVGTPAAELLKWK 193 (216)
Q Consensus 117 ~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~Gk~vvViGrS--~~VG~Pla~lL~~~ 193 (216)
.+.+.+.. ++-.+|.|- | ....||=+++ ++.+.++.| +++|++|++||-. ..|.+.+...+..-
T Consensus 110 ~~~lA~~~-------~vPVINag~---g--~~~HPtQ~LaDl~Ti~e~~g-~l~glkva~vGD~~~~rva~Sl~~~~~~~ 176 (306)
T 4ekn_B 110 ARLASEYS-------QVPIINAGD---G--SNQHPTQTLLDLYTIMREIG-RIDGIKIAFVGDLKYGRTVHSLVYALSLF 176 (306)
T ss_dssp HHHHHHHC-------SSCEEESCS---S--SSCCHHHHHHHHHHHHHHHS-CSTTCEEEEESCTTTCHHHHHHHHHHHTS
T ss_pred HHHHHHhC-------CCCEEeCCC---C--CCcCcHHHHHHHHHHHHHhC-CcCCCEEEEEcCCCCCcHHHHHHHHHHhc
Confidence 34444332 133456421 1 3688998888 566777776 6899999999975 46889999999988
Q ss_pred -CCEEEEecCCC
Q psy7981 194 -HATVTVCHSKT 204 (216)
Q Consensus 194 -~ATVtichs~T 204 (216)
|++|++|.=.+
T Consensus 177 ~G~~v~~~~P~~ 188 (306)
T 4ekn_B 177 ENVEMYFVSPKE 188 (306)
T ss_dssp SSCEEEEECCGG
T ss_pred CCCEEEEECCcc
Confidence 99999996544
No 130
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=91.76 E-value=0.11 Score=44.26 Aligned_cols=38 Identities=18% Similarity=0.171 Sum_probs=35.1
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
.+++||.|+|.|-|.-+|+-++..|.++||+|.++...
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 46899999999999999999999999999999998654
No 131
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=91.74 E-value=1.1 Score=39.42 Aligned_cols=137 Identities=12% Similarity=0.036 Sum_probs=91.4
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCC-----CCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCH
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLP-----RSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINA 117 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~-----~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~ 117 (216)
.++.+..- .|-----+=..++.++|.++....-. ...|-+|-...+..+ +|+|++-.|- |-..
T Consensus 38 ~la~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~-----~D~iviR~~~----~~~~ 105 (307)
T 3tpf_A 38 TLAMIFEK---NSTRTRMAFELAITELGGKALFLSSNDLQLSRGEPVKDTARVIGAM-----VDFVMMRVNK----HETL 105 (307)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHHH-----SSEEEEECSC----HHHH
T ss_pred EEEEEecC---CCcchHHhHHHHHHHcCCeEEEcCcccccCCCCCCHHHHHHHHHHh-----CCEEEEecCC----hHHH
Confidence 45555543 33333334478899999998776421 122344555555555 6799987664 3333
Q ss_pred HHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCC-CCeEEEecCCCcccHHHHHHhhhCCC
Q psy7981 118 MLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIA-GTNAVVLGRSKIVGTPAAELLKWKHA 195 (216)
Q Consensus 118 ~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~-Gk~vvViGrS~~VG~Pla~lL~~~~A 195 (216)
+.+.+.. ++-.+|.|- ....||=+++ ++.+.++.| +++ |++|++||-.+.|.+.+...+..-|+
T Consensus 106 ~~lA~~~-------~vPVINag~------~~~HPtQaLaDl~Ti~e~~g-~l~~gl~va~vGD~~~va~Sl~~~~~~~G~ 171 (307)
T 3tpf_A 106 LEFARYS-------KAPVINALS------ELYHPTQVLGDLFTIKEWNK-MQNGIAKVAFIGDSNNMCNSWLITAAILGF 171 (307)
T ss_dssp HHHHHHC-------SSCEEEEEC------SSCCHHHHHHHHHHHHHTTC-CGGGCCEEEEESCSSHHHHHHHHHHHHHTC
T ss_pred HHHHHhC-------CCCEEeCCC------CCcCcHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCCccHHHHHHHHHHcCC
Confidence 3443332 234567642 2678998888 556666666 789 99999999999999999999988899
Q ss_pred EEEEecCCCC
Q psy7981 196 TVTVCHSKTK 205 (216)
Q Consensus 196 TVtichs~T~ 205 (216)
+|++|.=.+-
T Consensus 172 ~v~~~~P~~~ 181 (307)
T 3tpf_A 172 EISIAMPKNY 181 (307)
T ss_dssp EEEEECCTTC
T ss_pred EEEEECCCcc
Confidence 9999976553
No 132
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=91.70 E-value=0.19 Score=47.09 Aligned_cols=41 Identities=41% Similarity=0.391 Sum_probs=36.3
Q ss_pred HhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 163 RTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 163 ~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..+.++.||+|+|||-+. +|+.+|..|...|+.|+++....
T Consensus 270 ~~g~~L~GktVgIIG~G~-IG~~vA~~l~~~G~~V~v~d~~~ 310 (494)
T 3d64_A 270 ATDVMIAGKIAVVAGYGD-VGKGCAQSLRGLGATVWVTEIDP 310 (494)
T ss_dssp HHCCCCTTCEEEEECCSH-HHHHHHHHHHTTTCEEEEECSCH
T ss_pred ccccccCCCEEEEEccCH-HHHHHHHHHHHCCCEEEEEeCCh
Confidence 467889999999999876 69999999999999999997643
No 133
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.62 E-value=0.1 Score=43.83 Aligned_cols=38 Identities=18% Similarity=0.281 Sum_probs=33.2
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
-++++||+|+|||-+. ||.-.+.+|++.||.||++-..
T Consensus 26 fl~L~gk~VLVVGgG~-va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGGT-IATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp EECCTTCCEEEECCSH-HHHHHHHHHGGGCCCEEEECSS
T ss_pred EEEcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEECCC
Confidence 4689999999999875 6999999999999999998643
No 134
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=91.57 E-value=0.1 Score=44.03 Aligned_cols=41 Identities=27% Similarity=0.286 Sum_probs=33.4
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
++||.|+|.|-|.-+|+-++..|.++|++|.++.+....++
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~ 62 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVS 62 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 47999999999999999999999999999999876543333
No 135
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=91.56 E-value=0.13 Score=43.26 Aligned_cols=39 Identities=23% Similarity=0.296 Sum_probs=35.2
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.+++||.|+|.|.|.-+|+-++..|.++|++|.++....
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 63 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANS 63 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 357899999999999999999999999999999986654
No 136
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=91.48 E-value=0.21 Score=47.00 Aligned_cols=51 Identities=24% Similarity=0.195 Sum_probs=42.8
Q ss_pred cccCCHHHHHHHHHH----------hCC--CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEe
Q psy7981 149 FIPCTPNGVLELIKR----------TNV--TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVC 200 (216)
Q Consensus 149 ~~PcTa~av~~lL~~----------~~i--~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtic 200 (216)
-.++|..|++..++. .|. +++||+|+|-| +..||.-.+.+|.+.||+|..|
T Consensus 211 r~eATg~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG-~GNVG~~aa~~L~e~GakVVav 273 (501)
T 3mw9_A 211 RISATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQG-FGNVGLHSMRYLHRFGAKCITV 273 (501)
T ss_dssp TTTHHHHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCchHHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEE
Confidence 346899999887763 575 58999999999 6778999999999999998753
No 137
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=91.37 E-value=0.18 Score=42.89 Aligned_cols=38 Identities=21% Similarity=0.168 Sum_probs=34.8
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
.+++||.|+|.|-|.-+|+-++..|.++|+.|.++...
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCG
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999999999999999999999999998654
No 138
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=91.35 E-value=0.68 Score=39.35 Aligned_cols=93 Identities=13% Similarity=0.109 Sum_probs=57.9
Q ss_pred hhcccHH-HHHHHHHHHHHHHHHHHhc--------CCCCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCC
Q psy7981 11 QILSGTA-VSGDIREGLKERVKKLKER--------LPDFEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPR 80 (216)
Q Consensus 11 ~il~Gk~-vA~~i~~~ik~~v~~l~~~--------~~~~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~ 80 (216)
++|+|+. |+++-++.+.+.+++|-=. ..+....+++|.-. .++--..+++...+.|++.|.++....-
T Consensus 19 rvLn~~~~vs~~tr~rV~~~a~~lgY~pn~~ar~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~-- 96 (340)
T 1qpz_A 19 HVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNA-- 96 (340)
T ss_dssp HHHHTCSCCCHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCSEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEEC--
T ss_pred HHHcCcCCCCHHHHHHHHHHHHHhCCCCCHHHHhhccCCCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEeC--
Confidence 5677753 7777777777666554100 00234466666533 2444445677888999999998876543
Q ss_pred CCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 81 SITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 81 ~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
+.+.++..+.++.+. ...|+||++.
T Consensus 97 ~~~~~~~~~~~~~l~-~~~vdgiI~~ 121 (340)
T 1qpz_A 97 WNNLEKQRAYLSMMA-QKRVDGLLVM 121 (340)
T ss_dssp TTCHHHHHHHHHHHH-HTTCSEEEEC
T ss_pred CCCHHHHHHHHHHHH-cCCCCEEEEe
Confidence 334555556666665 3479999986
No 139
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=91.29 E-value=0.21 Score=45.28 Aligned_cols=44 Identities=16% Similarity=0.296 Sum_probs=38.5
Q ss_pred HHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 158 LELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 158 ~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
+.+.++.+.++.||+|.|||-+.+ |+++|..|...|+.|+.+..
T Consensus 107 L~l~r~~g~~l~gktvGIIGlG~I-G~~vA~~l~a~G~~V~~~d~ 150 (381)
T 3oet_A 107 LMLAERDGFSLRDRTIGIVGVGNV-GSRLQTRLEALGIRTLLCDP 150 (381)
T ss_dssp HHHHHHTTCCGGGCEEEEECCSHH-HHHHHHHHHHTTCEEEEECH
T ss_pred HHHHHhcCCccCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEECC
Confidence 345566789999999999999876 99999999999999999863
No 140
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.28 E-value=0.19 Score=43.14 Aligned_cols=42 Identities=29% Similarity=0.358 Sum_probs=36.4
Q ss_pred HHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 162 KRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 162 ~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+..+.++.|++|.|||-+. +|+.++..|...|+.|+++....
T Consensus 149 ~~~~~~l~g~~v~IiG~G~-iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 149 QHTDYTIHGSQVAVLGLGR-TGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp HTCSSCSTTSEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSH
T ss_pred HhcCCCCCCCEEEEEcccH-HHHHHHHHHHHCCCEEEEEECCH
Confidence 4467899999999999865 69999999999999999997643
No 141
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=91.20 E-value=0.22 Score=41.89 Aligned_cols=37 Identities=14% Similarity=0.249 Sum_probs=33.7
Q ss_pred CCCCeEEEecCC--CcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 168 IAGTNAVVLGRS--KIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 168 l~Gk~vvViGrS--~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+.||.|+|.|-| .-+|+-++..|.++|++|.++.+..
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 57 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATP 57 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCH
Confidence 789999999998 8999999999999999999987543
No 142
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=91.16 E-value=0.2 Score=41.16 Aligned_cols=41 Identities=7% Similarity=-0.017 Sum_probs=34.5
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCC---CEEEEecCCCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKH---ATVTVCHSKTKN 206 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~---ATVtichs~T~~ 206 (216)
.+++||+|+|.|-|.-+|+-++..|+++| ++|+++.+....
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~ 60 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ 60 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTS
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhh
Confidence 45789999999999999999999999999 999998765543
No 143
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=91.15 E-value=0.19 Score=42.45 Aligned_cols=39 Identities=18% Similarity=0.125 Sum_probs=35.1
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.++.||.|+|.|-|.-+|+-++..|.++|++|.++....
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~ 63 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGD 63 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 357899999999999999999999999999999987544
No 144
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=91.12 E-value=0.25 Score=42.00 Aligned_cols=39 Identities=15% Similarity=0.193 Sum_probs=34.7
Q ss_pred CCCCCCeEEEecCCC--cccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSK--IVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~--~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.+++||.|+|.|-+. -+|+-++..|.++|++|.++....
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 468999999999984 899999999999999999987654
No 145
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.04 E-value=0.16 Score=43.39 Aligned_cols=39 Identities=21% Similarity=0.182 Sum_probs=30.7
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
-++.+|+|+|.|.+..+|+.++..|+++|++|+.+....
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 457899999999999999999999999999999987654
No 146
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=90.92 E-value=1 Score=38.55 Aligned_cols=97 Identities=15% Similarity=0.218 Sum_probs=42.0
Q ss_pred hhcccHH-HHHHHHHHHHHHHHHHHhc--------CCCCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCC
Q psy7981 11 QILSGTA-VSGDIREGLKERVKKLKER--------LPDFEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPR 80 (216)
Q Consensus 11 ~il~Gk~-vA~~i~~~ik~~v~~l~~~--------~~~~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~ 80 (216)
++|+|++ ++.+-++.+.+.+++|-=. ..+....+++|.-. .++--..+++...+.|++.|..+.......
T Consensus 22 rvLn~~~~vs~~tr~rV~~~a~~lgY~pn~~ar~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 101 (349)
T 1jye_A 22 RVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAILSRADQLGASVVVSMVER 101 (349)
T ss_dssp ----------------------------------------CEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHcCCCCCCHHHHHHHHHHHHHHCCCcCHHHHHhhcCCCCEEEEEeCCCCcccHHHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 5788874 6666666665555444100 00122345555432 234344566788899999999988765543
Q ss_pred CCCHHHHHHHHHHhcCCCCccEEEEeCCC
Q psy7981 81 SITEIELLSRLKKLNEDPSVHGIIVQMPL 109 (216)
Q Consensus 81 ~~~~~el~~~I~~lN~D~~V~GIlvqlPL 109 (216)
+ ..++..+.++.+-. ..|+||++..|.
T Consensus 102 ~-~~~~~~~~l~~l~~-~~vdGiIi~~~~ 128 (349)
T 1jye_A 102 S-GVEACKTAVHNLLA-QRVSGLIINYPL 128 (349)
T ss_dssp S-SHHHHHHHHHHHHT-TTCSCEEEESCC
T ss_pred C-cHHHHHHHHHHHHH-CCCCEEEEecCC
Confidence 2 33444556666643 479999998776
No 147
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=90.87 E-value=0.2 Score=41.36 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=33.6
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKN 206 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~ 206 (216)
+.-||+|+|.|-|.-+|+-++..|.++|++|.++......
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~ 58 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENP 58 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 3458999999999999999999999999999998765543
No 148
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=90.80 E-value=0.2 Score=46.72 Aligned_cols=41 Identities=24% Similarity=0.293 Sum_probs=36.0
Q ss_pred HhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 163 RTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 163 ~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..+..+.||+|+|||-+.+ |+.+|..|...|+.|+++....
T Consensus 250 ~~~~~l~GktVgIIG~G~I-G~~vA~~l~~~G~~Viv~d~~~ 290 (479)
T 1v8b_A 250 ATDFLISGKIVVICGYGDV-GKGCASSMKGLGARVYITEIDP 290 (479)
T ss_dssp HHCCCCTTSEEEEECCSHH-HHHHHHHHHHHTCEEEEECSCH
T ss_pred ccccccCCCEEEEEeeCHH-HHHHHHHHHhCcCEEEEEeCCh
Confidence 3577999999999998765 9999999999999999997643
No 149
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=90.77 E-value=0.11 Score=43.73 Aligned_cols=40 Identities=13% Similarity=0.077 Sum_probs=33.6
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+.++.||.|+|.|.|.-+|+-++..|.++|++|.++....
T Consensus 11 ~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 50 (266)
T 3p19_A 11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRV 50 (266)
T ss_dssp ----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4567899999999999999999999999999999987653
No 150
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=90.75 E-value=0.75 Score=41.27 Aligned_cols=137 Identities=13% Similarity=0.074 Sum_probs=85.7
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCC-----CCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCH
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPR-----SITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINA 117 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~-----~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~ 117 (216)
.++.+..- |+.+.- -+=..++.++|.++....-.. ..|-+|-...+..+ +|+|++--|- +-..
T Consensus 72 ~la~lF~e--pSTRTR-~SFE~A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~~-----~D~IviR~~~----~~~~ 139 (358)
T 4h31_A 72 NIALIFEK--ASTRTR-CAFEVAAFDQGAQVTYIGPSGSQIGDKESMKDTARVLGRM-----YDGIQYRGFG----QAIV 139 (358)
T ss_dssp EEEEEESS--CCSHHH-HHHHHHHHHTTCEEEEECSSSSCBTTTBCHHHHHHHHHHH-----CSEEEEECSC----HHHH
T ss_pred EEEEEeCC--CChhhH-HHHHHHHHHcCCeEEECCcccccccCccchhHHHHHhhcc-----CceeEecccc----hhHH
Confidence 35555544 233322 234678999999987554322 12344555555555 6788887653 3333
Q ss_pred HHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhC-CCCCCCeEEEecCC-CcccHHHHHHhhhCC
Q psy7981 118 MLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTN-VTIAGTNAVVLGRS-KIVGTPAAELLKWKH 194 (216)
Q Consensus 118 ~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~-i~l~Gk~vvViGrS-~~VG~Pla~lL~~~~ 194 (216)
+.+.+.. +| -.+| |+.....||=+++ ++.+.++.+ -.++|++|++||-. +.|.+.+..++..-|
T Consensus 140 ~~la~~s----~v---PVIN------G~g~~~HPtQaL~Dl~Ti~e~~~~~~l~gl~ia~vGD~~~~va~S~~~~~~~~g 206 (358)
T 4h31_A 140 EELGAFA----GV---PVWN------GLTDEFHPTQILADFLTMLEHSQGKALADIQFAYLGDARNNVGNSLMVGAAKMG 206 (358)
T ss_dssp HHHHHHS----SS---CEEE------SCCSSCCHHHHHHHHHHHHHTTTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHT
T ss_pred HHhhhhc----cC---ceEC------CCCcCCCchHHHHHHHHHHHHhcCCCcCceEEEecCCCCcccchHHHHHHHhcC
Confidence 3333322 22 2234 3213678997777 556666665 47999999999954 468999999999999
Q ss_pred CEEEEecCCC
Q psy7981 195 ATVTVCHSKT 204 (216)
Q Consensus 195 ATVtichs~T 204 (216)
+.|++|.=.+
T Consensus 207 ~~v~~~~P~~ 216 (358)
T 4h31_A 207 MDIRLVGPQA 216 (358)
T ss_dssp CEEEEESCGG
T ss_pred ceEEEeCCcc
Confidence 9999996543
No 151
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=90.68 E-value=2.1 Score=37.62 Aligned_cols=140 Identities=18% Similarity=0.133 Sum_probs=93.2
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCH----HHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHH
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITE----IELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAM 118 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~----~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~ 118 (216)
.++.+... .|-.---+=.-++.++|.++....-. +.++ |-+.+.++-|+.= +|+|++-.|- |-..+
T Consensus 46 ~l~~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~-~~s~~~kgEsl~DTarvls~~--~D~iviR~~~----~~~~~ 115 (308)
T 1ml4_A 46 ILATLFFE---PSTRTRLSFESAMHRLGGAVIGFAEA-STSSVKKGESLRDTIKTVEQY--CDVIVIRHPK----EGAAR 115 (308)
T ss_dssp EEEEEESS---CCSHHHHHHHHHHHHTTCEEEEESCG-GGSGGGGTCCHHHHHHHHTTT--CSEEEEEESS----TTHHH
T ss_pred EEEEEecC---CCchHHHHHHHHHHHhCCeEEEeCCC-ccccccCCCCHHHHHHHHHHh--CcEEEEecCC----hhHHH
Confidence 45555554 23333334478899999987766432 2122 5666777777655 6899998775 33344
Q ss_pred HHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEecCC--CcccHHHHHHhhhCCC
Q psy7981 119 LVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNVTIAGTNAVVLGRS--KIVGTPAAELLKWKHA 195 (216)
Q Consensus 119 ~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i~l~Gk~vvViGrS--~~VG~Pla~lL~~~~A 195 (216)
.+.+.. ++-.+|.|- | ....||=+++ ++.+.++.| +++|++|++||-. ..|.+.+...+..-|+
T Consensus 116 ~la~~~-------~vPVINag~---g--~~~HPtQ~LaDl~Ti~e~~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~ 182 (308)
T 1ml4_A 116 LAAEVA-------EVPVINAGD---G--SNQHPTQTLLDLYTIKKEFG-RIDGLKIGLLGDLKYGRTVHSLAEALTFYDV 182 (308)
T ss_dssp HHHHTC-------SSCEEEEEE---T--TSCCHHHHHHHHHHHHHHSS-CSSSEEEEEESCTTTCHHHHHHHHHGGGSCE
T ss_pred HHHHhC-------CCCEEeCcc---C--CccCcHHHHHHHHHHHHHhC-CCCCeEEEEeCCCCcCchHHHHHHHHHHCCC
Confidence 444332 234566532 2 3688998888 555555555 7999999999986 3588999999999999
Q ss_pred EEEEecCCCC
Q psy7981 196 TVTVCHSKTK 205 (216)
Q Consensus 196 TVtichs~T~ 205 (216)
.|++|+=.+-
T Consensus 183 ~v~~~~P~~~ 192 (308)
T 1ml4_A 183 ELYLISPELL 192 (308)
T ss_dssp EEEEECCGGG
T ss_pred EEEEECCccc
Confidence 9999976553
No 152
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=90.64 E-value=0.19 Score=42.23 Aligned_cols=39 Identities=23% Similarity=0.185 Sum_probs=32.8
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.++||.|+|.|-|.-+|+-++..|.++|++|.++.....
T Consensus 24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~ 62 (267)
T 3u5t_A 24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKA 62 (267)
T ss_dssp ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 357999999999999999999999999999999755444
No 153
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=90.40 E-value=0.21 Score=46.31 Aligned_cols=53 Identities=23% Similarity=0.134 Sum_probs=43.6
Q ss_pred cccCCHHHHHHHH----HHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEE-EecC
Q psy7981 149 FIPCTPNGVLELI----KRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVT-VCHS 202 (216)
Q Consensus 149 ~~PcTa~av~~lL----~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVt-ichs 202 (216)
.-+.|+.|++..+ ++.|.+++|++|+|.|- ..||.-++.+|.+.||+|. ++.+
T Consensus 205 r~~aTg~Gv~~~~~~~~~~~G~~l~g~~v~VqG~-GnVG~~~a~~L~~~GakvVavsD~ 262 (449)
T 1bgv_A 205 RPEATGYGSVYYVEAVMKHENDTLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSGP 262 (449)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCCSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEET
T ss_pred cccchhHHHHHHHHHHHHHccCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeC
Confidence 4468999987664 55699999999999995 6679999999999999977 4554
No 154
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=90.38 E-value=0.17 Score=40.81 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=33.7
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCC--EEEEecCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHA--TVTVCHSKT 204 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~A--TVtichs~T 204 (216)
+.||+|+|.|.+..+|+.++..|+++|+ +|+++.+..
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~ 54 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRK 54 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCC
Confidence 5789999999999999999999999999 999887654
No 155
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=90.34 E-value=0.15 Score=47.56 Aligned_cols=122 Identities=22% Similarity=0.281 Sum_probs=67.9
Q ss_pred HHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcC---C-CCCcccCCcc-c
Q psy7981 63 MKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVS---P-EKDVDGLNTI-N 137 (216)
Q Consensus 63 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~---p-~KDVDG~~~~-n 137 (216)
-.+++++|++.....+.-+ ++.+.++.+. +.++.|.-|..|. + . .++..++ | .+.+-.++.+ +
T Consensus 254 n~~f~~~gl~~~Y~~~~~~----~l~~~~~~~~-~~~~~G~nVTiP~---K-~---~i~~~ld~~~~~A~~iGAvNti~~ 321 (523)
T 2o7s_A 254 NQAFKSVDFNGVYVHLLVD----NLVSFLQAYS-SSDFAGFSCTIPH---K-E---AALQCCDEVDPLAKSIGAVNTILR 321 (523)
T ss_dssp HHHHHHTTCSEEEEEEECS----CHHHHHHHTC-STTEEEEEECTTC---H-H---HHHHHCSEECHHHHHHTCCSEEEE
T ss_pred HHHHHHcCCCcEEEeEEcc----hHHHHHHHHh-cCCCCEEEECCCC---H-H---HHHHHhcccCHHHHHhCCCeEEEE
Confidence 5677899999877666542 4555555553 4569999999997 1 1 2222221 1 0111222211 1
Q ss_pred ---hhHhhcCCCCCcccCCHHHHHHHHHHh-------------CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEec
Q psy7981 138 ---EGRVAIGDMNGFIPCTPNGVLELIKRT-------------NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCH 201 (216)
Q Consensus 138 ---~G~l~~~~~~~~~PcTa~av~~lL~~~-------------~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtich 201 (216)
-|+++... . .-.|.+..|+.. ..+++||+|+|+|.+ =.|+-++..|.++|+.|+++.
T Consensus 322 ~~~~gk~~g~n-T-----D~~G~~~~l~~~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-Gig~aia~~L~~~G~~V~i~~ 394 (523)
T 2o7s_A 322 RKSDGKLLGYN-T-----DCIGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAG-GAGKALAYGAKEKGAKVVIAN 394 (523)
T ss_dssp CTTTCCEEEEC-C-----HHHHHHHHHHHHC-------------------CEEEECCS-HHHHHHHHHHHHHCC-CEEEE
T ss_pred ecCCCeEEEEc-C-----CHHHHHHHHHHhhhhccccccccccccccCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEE
Confidence 23332111 1 112444444432 236889999999998 679999999999999999997
Q ss_pred CC
Q psy7981 202 SK 203 (216)
Q Consensus 202 s~ 203 (216)
+.
T Consensus 395 R~ 396 (523)
T 2o7s_A 395 RT 396 (523)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 156
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=90.32 E-value=0.27 Score=41.95 Aligned_cols=51 Identities=10% Similarity=0.060 Sum_probs=40.6
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 150 IPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 150 ~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.|-|+.-+..-. .+.+++|+|.|.+..+|+-++..|+++|++|+.+.....
T Consensus 10 ~~~~~~~~~~~~-----~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 10 YMSRYEEITQQL-----IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp CCHHHHHHHHHH-----HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred HHHHHhhHHhhC-----CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 444555554433 357899999999999999999999999999999877554
No 157
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=90.30 E-value=0.19 Score=41.77 Aligned_cols=38 Identities=21% Similarity=0.203 Sum_probs=32.6
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
++.||.|+|.|-|.-+|+-++..|.++|+.|.++..+.
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~ 60 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRD 60 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999999999999999999999999997765444
No 158
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=90.25 E-value=0.26 Score=41.10 Aligned_cols=38 Identities=13% Similarity=0.108 Sum_probs=34.6
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
++.||.|+|.|.|.-+|+-++..|.++|++|.++....
T Consensus 25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 62 (260)
T 3un1_A 25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSI 62 (260)
T ss_dssp HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 36899999999999999999999999999999987654
No 159
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=90.22 E-value=0.3 Score=42.93 Aligned_cols=40 Identities=18% Similarity=0.240 Sum_probs=36.3
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
-+++||.|+|.|-|.-+|+-++..|.++||+|.++.....
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~ 80 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQ 80 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCS
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChh
Confidence 4689999999999999999999999999999999876554
No 160
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=90.08 E-value=0.32 Score=41.39 Aligned_cols=37 Identities=14% Similarity=0.165 Sum_probs=33.6
Q ss_pred CCCCCeEEEecCCCc--ccHHHHHHhhhCCCEEEEecCC
Q psy7981 167 TIAGTNAVVLGRSKI--VGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~--VG~Pla~lL~~~~ATVtichs~ 203 (216)
.++||.|+|.|-|.- +|+-++..|.++|++|.++.+.
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~ 66 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG 66 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 579999999999966 9999999999999999988654
No 161
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=89.95 E-value=0.29 Score=41.74 Aligned_cols=38 Identities=18% Similarity=0.113 Sum_probs=32.4
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.+.|++|+|.|.+..+|+-++..|+++|++|+++....
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~ 55 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFA 55 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCC
Confidence 45789999999999999999999999999999987643
No 162
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=89.87 E-value=0.33 Score=44.59 Aligned_cols=134 Identities=16% Similarity=0.115 Sum_probs=86.9
Q ss_pred HHHHHHHHcCcceEEEeCCCCC--CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCH---HHHhhhcCC-CCC-c--c
Q psy7981 61 MKMKAAKEIGIDAQHVKLPRSI--TEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINA---MLVTDSVSP-EKD-V--D 131 (216)
Q Consensus 61 ~k~k~a~~~Gi~~~~~~l~~~~--~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~---~~i~~~I~p-~KD-V--D 131 (216)
+=.-++.++|.++....-.... .-|-+.++++-|+.= +|+|++-.|. ..+... +.+.+.... .+. | .
T Consensus 77 SFE~A~~~LGg~vi~l~~~~ss~~kGEsl~DTarvLs~y--~D~IviRh~~--~~g~~~~~~~~lA~~~~~~~~~~~~~~ 152 (418)
T 2yfk_A 77 SFASACNLLGLEVQDLDEGKSQISHGETVRETANMISFM--ADIIGIRDDM--YIGKGNAYMHEVSESVQEGYKDGVLEQ 152 (418)
T ss_dssp HHHHHHHHHTCEEEEECC--------CHHHHHHHHTTTT--EEEEEEEECS--STTHHHHHHHHHHHHHHHHHHTTSCSS
T ss_pred HHHHHHHHCCCeEEecCCCcccCCCCcCHHHHHHHHHHh--CcEEEEeccc--ccCcchHHHHHHHHHHHhhhcccccCC
Confidence 3477899999988766432211 224688888888776 7999998874 212222 223322200 000 0 0
Q ss_pred cCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCC-C-CCCCeEEEe-------cCCCcccHHHHHHhhhCCCEEEEec
Q psy7981 132 GLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNV-T-IAGTNAVVL-------GRSKIVGTPAAELLKWKHATVTVCH 201 (216)
Q Consensus 132 G~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i-~-l~Gk~vvVi-------GrS~~VG~Pla~lL~~~~ATVtich 201 (216)
....+|.| | ....||=+++ ++.+.++.|- + ++|++|++| ||.+.|.+.+..+|..-|+.|++|+
T Consensus 153 ~~PVINa~----~--~~~HPtQaLaDl~TI~E~~G~l~~l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~ 226 (418)
T 2yfk_A 153 RPTLVNLQ----C--DIDHPTQAMADALHLIHEFGGIENLKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAH 226 (418)
T ss_dssp CCEEEEEE----E--SSCCHHHHHHHHHHHHHHTTSSGGGTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEEC
T ss_pred CCeEEeCC----C--CccChHHHHHHHHHHHHHhCCccccCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEEC
Confidence 11235743 2 3578998887 6667777773 2 899999999 7777899999999999999999998
Q ss_pred CCC
Q psy7981 202 SKT 204 (216)
Q Consensus 202 s~T 204 (216)
=.+
T Consensus 227 P~~ 229 (418)
T 2yfk_A 227 PEG 229 (418)
T ss_dssp CTT
T ss_pred Ccc
Confidence 664
No 163
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=89.83 E-value=0.18 Score=37.71 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=29.8
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
.+++++|+|-+. +|..++..|.++|..|+++...
T Consensus 5 ~~~~v~I~G~G~-iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEA-AGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSH-HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEECC
Confidence 568999999866 8999999999999999999764
No 164
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=89.78 E-value=0.17 Score=44.00 Aligned_cols=34 Identities=26% Similarity=0.165 Sum_probs=32.0
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEec
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCH 201 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtich 201 (216)
++||.|+|.|-|.-+|+-++..|.++|++|.++.
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHY 77 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEc
Confidence 7899999999999999999999999999999986
No 165
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=89.77 E-value=0.24 Score=42.61 Aligned_cols=36 Identities=19% Similarity=0.204 Sum_probs=33.7
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
+++||.|+|.|-|.-+|+-++..|.++||+|.++..
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~ 78 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDL 78 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEec
Confidence 579999999999999999999999999999999854
No 166
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=89.39 E-value=0.23 Score=41.82 Aligned_cols=41 Identities=10% Similarity=0.178 Sum_probs=33.9
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
++. |.|+|.|.|.-+|+-++..|.++|++|.++.+....++
T Consensus 19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~ 59 (272)
T 2nwq_A 19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQ 59 (272)
T ss_dssp --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 456 89999999999999999999999999999876543343
No 167
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=89.25 E-value=0.5 Score=43.80 Aligned_cols=51 Identities=24% Similarity=0.154 Sum_probs=42.1
Q ss_pred cccCCHHHHHH----HHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEe
Q psy7981 149 FIPCTPNGVLE----LIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVC 200 (216)
Q Consensus 149 ~~PcTa~av~~----lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtic 200 (216)
--++|..|++. .+++.+.+++||+|+|=|- ..||.-++.+|.+.||+|..|
T Consensus 210 r~~aTg~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~-GnVG~~aa~~L~e~GakvVav 264 (450)
T 4fcc_A 210 RPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGS-GNVAQYAIEKAMEFGARVITA 264 (450)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCceeeeHHHHHHHHHHHcCCCcCCCEEEEeCC-ChHHHHHHHHHHhcCCeEEEE
Confidence 34679998765 4566799999999999985 556999999999999998765
No 168
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=89.11 E-value=0.21 Score=35.52 Aligned_cols=37 Identities=30% Similarity=0.268 Sum_probs=31.6
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCC-CEEEEecCCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKH-ATVTVCHSKTK 205 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~-ATVtichs~T~ 205 (216)
..+++|+|+|- ..+|+.++..|.++| ..|+++.....
T Consensus 3 ~~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~ 40 (118)
T 3ic5_A 3 AMRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLA 40 (118)
T ss_dssp TTCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHH
T ss_pred CCcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHH
Confidence 35789999999 788999999999999 89999876443
No 169
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=89.04 E-value=0.32 Score=45.37 Aligned_cols=52 Identities=23% Similarity=0.273 Sum_probs=43.8
Q ss_pred ccCCHHHHHHH----HHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEE-EecC
Q psy7981 150 IPCTPNGVLEL----IKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVT-VCHS 202 (216)
Q Consensus 150 ~PcTa~av~~l----L~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVt-ichs 202 (216)
-++|..|++.. +++.|.+++||+|+|-|- ..||.-++.+|.+.||+|. ++.+
T Consensus 228 ~~aTg~Gv~~~~~~~l~~~G~~l~g~~vaVqG~-GnVG~~~a~~L~~~GakvVavsD~ 284 (470)
T 2bma_A 228 VEATGYGLVYFVLEVLKSLNIPVEKQTAVVSGS-GNVALYCVQKLLHLNVKVLTLSDS 284 (470)
T ss_dssp TTHHHHHHHHHHHHHHHTTTCCGGGCEEEEECS-SHHHHHHHHHHHHTTCEECEEEET
T ss_pred cccchHHHHHHHHHHHHhccCCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEEeC
Confidence 46899987755 455799999999999995 6679999999999999987 7775
No 170
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=88.88 E-value=7.2 Score=34.72 Aligned_cols=167 Identities=14% Similarity=0.089 Sum_probs=102.6
Q ss_pred cccHHHHHHHHHHHHHHHHHHHhcCC--CCC-ceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCC-----CCCH
Q psy7981 13 LSGTAVSGDIREGLKERVKKLKERLP--DFE-PGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPR-----SITE 84 (216)
Q Consensus 13 l~Gk~vA~~i~~~ik~~v~~l~~~~~--~~~-P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~-----~~~~ 84 (216)
|+-..+..+=...|-+....+++... -.+ -.++.+... .|-.---+=..++.++|.++....-.. ..|-
T Consensus 39 Lsi~dls~~ei~~ll~~A~~lk~~~~~~~L~gK~la~lF~e---pSTRTR~SFE~A~~~LGg~vi~l~~~~ss~~kgEsl 115 (340)
T 4ep1_A 39 LTLEELTQEEIISLIEFAIYLKKNKQEPLLQGKILGLIFDK---HSTRTRVSFEAGMVQLGGHGMFLNGKEMQMGRGETV 115 (340)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHHHSCCCCTTTTCEEEEEESS---CCHHHHHHHHHHHHHTTCEEEEEESCC------CCT
T ss_pred cchhhCCHHHHHHHHHHHHHHHhcccccccCCceEEEEecC---CCccHHHHHHHHHHHcCCeEEEcCcccccCCCCCCH
Confidence 44444444333444444555553211 011 245554433 333333344788999999987665221 1233
Q ss_pred HHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHH
Q psy7981 85 IELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKR 163 (216)
Q Consensus 85 ~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~ 163 (216)
+|-...+..+ +|+|.+--|- +-..+.+.+.. ++-.+|.|- ....||=+++ ++.+.++
T Consensus 116 ~DTarvLs~y-----~D~IviR~~~----~~~~~~lA~~~-------~vPVINag~------~~~HPtQaLaDl~TI~E~ 173 (340)
T 4ep1_A 116 SDTAKVLSHY-----IDGIMIRTFS----HADVEELAKES-------SIPVINGLT------DDHHPCQALADLMTIYEE 173 (340)
T ss_dssp THHHHHHHHH-----CSEEEEECSC----HHHHHHHHHHC-------SSCEEEEEC------SSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-----CCEEEEecCC----hhHHHHHHHhC-------CCCEEeCCC------CCCCcHHHHHHHHHHHHH
Confidence 4555555555 7799987664 33333443333 234567541 2678998888 6677777
Q ss_pred hCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 164 TNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 164 ~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.| .++|++|++||-.+.|.+.+..+|..-|++|++|.=.+-
T Consensus 174 ~G-~l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~ 214 (340)
T 4ep1_A 174 TN-TFKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGY 214 (340)
T ss_dssp HS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred hC-CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCccc
Confidence 77 589999999999988999999999888999999976553
No 171
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=88.85 E-value=0.29 Score=40.78 Aligned_cols=37 Identities=27% Similarity=0.202 Sum_probs=33.3
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+.||.|+|.|-|.-+|+-++..|.++|+.|.++.+..
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~ 59 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSER 59 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSC
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCc
Confidence 5799999999999999999999999999999987544
No 172
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=88.84 E-value=1.2 Score=37.73 Aligned_cols=94 Identities=14% Similarity=0.089 Sum_probs=40.3
Q ss_pred hhcccHH-HHHHHHHHHHHHHHHHHhc--------CCCCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCC
Q psy7981 11 QILSGTA-VSGDIREGLKERVKKLKER--------LPDFEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPR 80 (216)
Q Consensus 11 ~il~Gk~-vA~~i~~~ik~~v~~l~~~--------~~~~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~ 80 (216)
++|+|++ |+++-++.+.+-+++|-=. ..+....+++|.-. .++--..+++...+.|++.|..........
T Consensus 24 rvln~~~~vs~~tr~rV~~~a~~lgY~pn~~ar~l~~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~ 103 (332)
T 2o20_A 24 RVVNGNANVKEKTRQKVLEAIAELDYRPNAVARGLASKRTTTVGVILPTITSTYFAAITRGVDDIASMYKYNMILANSDN 103 (332)
T ss_dssp --------------------------------------CCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHcCCCCCCHHHHHHHHHHHHHHCCCcCHHHHHHhcCCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEEEEECCC
Confidence 5788874 6666666555544443100 00223345555532 233334456778889999999887765433
Q ss_pred CCCHHHHHHHHHHhcCCCCccEEEEeC
Q psy7981 81 SITEIELLSRLKKLNEDPSVHGIIVQM 107 (216)
Q Consensus 81 ~~~~~el~~~I~~lN~D~~V~GIlvql 107 (216)
+.++..+.++.+. +..|+||++.-
T Consensus 104 --~~~~~~~~~~~l~-~~~vdgiI~~~ 127 (332)
T 2o20_A 104 --DVEKEEKVLETFL-SKQVDGIVYMG 127 (332)
T ss_dssp --CHHHHHHHHHHHH-HTTCSEEEECS
T ss_pred --ChHHHHHHHHHHH-hCCCCEEEEeC
Confidence 4444555666664 34799999864
No 173
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=88.80 E-value=1.1 Score=40.83 Aligned_cols=146 Identities=18% Similarity=0.177 Sum_probs=97.9
Q ss_pred CceEEEEEeCCCc---chHHH------HHHHHHHH-HHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCC
Q psy7981 41 EPGLAIVQVGGRE---DSNVY------IRMKMKAA-KEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLD 110 (216)
Q Consensus 41 ~P~LaiI~vg~~~---as~~Y------v~~k~k~a-~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~ 110 (216)
...++|+.=|..- ++.-| ...|.... +-.||++..+.+... +.+|+++.++.+- |...||=+. -+
T Consensus 65 ~~~V~VvTdG~~iLGLGD~G~~aG~pI~eGK~~Lf~~~agid~~pi~Ldv~-~~dEfv~~v~~~~--p~F~~I~lE-D~- 139 (398)
T 2a9f_A 65 KNTVAVISDGTAVLGLGDIGPEAAMPVMEGKAALFKAFAGVDAIPIVLDTK-DTEEIISIVKALA--PTFGGINLE-DI- 139 (398)
T ss_dssp GTEEEEEECSSSCTTSCCCCHHHHHHHHHHHHHHHHHHSSCEEEEEECCCC-CHHHHHHHHHHHG--GGCSEEEEC-SC-
T ss_pred CCEEEEEECCccccCCCCcccccCCcchhCHHHHHHhccCCceeeeEeCCC-CHHHHHHHHHHcC--CceeEeccc-cC-
Confidence 3567777655431 11222 24455433 457999999998865 5899999999885 555554332 11
Q ss_pred CCCCCCHHHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHh
Q psy7981 111 SDNDINAMLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELL 190 (216)
Q Consensus 111 ~P~~id~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL 190 (216)
+.-+-.++++.....-|+.-||.--.| -.-.|..|.+.-++-.|.+++..+|||+|.+. +|.-.+.||
T Consensus 140 --~~p~~f~il~~~r~~~~ipvf~DDiqG---------Ta~V~lAall~al~l~g~~l~d~kVVi~GAGa-AG~~iA~ll 207 (398)
T 2a9f_A 140 --SAPRCFEIEQRLIKECHIPVFHDDQHG---------TAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGS-AGLSITRKL 207 (398)
T ss_dssp --CTTHHHHHHHHHHHHCSSCEEEHHHHH---------HHHHHHHHHHHHHHTTTCCTTSCEEEEECCSH-HHHHHHHHH
T ss_pred --CChHHHHHHHHhhhcCCcceecchhhh---------HHHHHHHHHHHHHHHhCCCCCccEEEEECCCH-HHHHHHHHH
Confidence 122223444444333456666643333 33456778888888889999999999999875 599999999
Q ss_pred hhCCC-EEEEecCC
Q psy7981 191 KWKHA-TVTVCHSK 203 (216)
Q Consensus 191 ~~~~A-TVtichs~ 203 (216)
...|+ .|++|.++
T Consensus 208 ~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 208 LAAGATKVTVVDKF 221 (398)
T ss_dssp HHHTCCEEEEEETT
T ss_pred HHcCCCeEEEEECC
Confidence 99999 99999987
No 174
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=88.79 E-value=0.28 Score=40.81 Aligned_cols=38 Identities=18% Similarity=0.169 Sum_probs=33.4
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
..||.|+|.|.|.-+|+-++..|+++|++|.++..+..
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~ 61 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANR 61 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCh
Confidence 36899999999999999999999999999988754443
No 175
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.75 E-value=0.44 Score=36.39 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=31.4
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
-....+++|+|+|- .-+|..++..|...|+.|+++...
T Consensus 14 ~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 14 SKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp ---CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred hcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECC
Confidence 35678999999995 677999999999999999999653
No 176
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=88.65 E-value=2.8 Score=35.27 Aligned_cols=87 Identities=10% Similarity=-0.047 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHHHhc------CCCCCceEEEEEeC--CCcchHHHHHHHHHHHHHcCcceEEEeCCCC--CCHHHH
Q psy7981 18 VSGDIREGLKERVKKLKER------LPDFEPGLAIVQVG--GREDSNVYIRMKMKAAKEIGIDAQHVKLPRS--ITEIEL 87 (216)
Q Consensus 18 vA~~i~~~ik~~v~~l~~~------~~~~~P~LaiI~vg--~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~--~~~~el 87 (216)
++.+-++++.+.+++|-=. ..+....+++|.-+ .++--..+++...+.|++.|.++....+..+ .+.++-
T Consensus 14 ~s~~tr~rV~~aa~elgY~pn~~Ar~~~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~ 93 (342)
T 1jx6_A 14 EFPEQRNLTNALSEAVRAQPVPLSKPTQRPIKISVVYPGQQVSDYWVRNIASFEKRLYKLNINYQLNQVFTRPNADIKQQ 93 (342)
T ss_dssp HCHHHHHHHHHHHHHHHSCCCCCSSCCSSCEEEEEEECCCSSCCHHHHHHHHHHHHHHHTTCCEEEEEEECCTTCCHHHH
T ss_pred hcHHHHHHHHHHHHHhcCCCCccccccCCceEEEEEecCCcccHHHHHHHHHHHHHHHHcCCeEEEEecCCCCccCHHHH
Confidence 4556666666666666310 01223456666654 3555556678888999999998877643222 344444
Q ss_pred HHHHHHhcCCCCccEEEE
Q psy7981 88 LSRLKKLNEDPSVHGIIV 105 (216)
Q Consensus 88 ~~~I~~lN~D~~V~GIlv 105 (216)
.+.++.+-. ..|+||++
T Consensus 94 ~~~i~~l~~-~~vdgiIi 110 (342)
T 1jx6_A 94 SLSLMEALK-SKSDYLIF 110 (342)
T ss_dssp HHHHHHHHH-TTCSEEEE
T ss_pred HHHHHHHHh-cCCCEEEE
Confidence 555666543 36999999
No 177
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.29 E-value=0.3 Score=35.87 Aligned_cols=35 Identities=17% Similarity=0.138 Sum_probs=29.5
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.+++|+|+|- ..+|..++..|...|+.|+++...
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 56889999997 788999999999999999988653
No 178
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=88.27 E-value=0.65 Score=41.32 Aligned_cols=38 Identities=13% Similarity=0.206 Sum_probs=34.2
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.++.||++.|||-+.+ |+++|..|...|+.|+.+...
T Consensus 168 g~~l~gktvGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~ 205 (345)
T 4g2n_A 168 GMGLTGRRLGIFGMGRI-GRAIATRARGFGLAIHYHNRT 205 (345)
T ss_dssp BCCCTTCEEEEESCSHH-HHHHHHHHHTTTCEEEEECSS
T ss_pred ccccCCCEEEEEEeChh-HHHHHHHHHHCCCEEEEECCC
Confidence 46899999999999876 999999999999999998764
No 179
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=88.07 E-value=0.35 Score=41.68 Aligned_cols=41 Identities=12% Similarity=0.172 Sum_probs=35.3
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhC-CCEEEEecCCCCChH
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWK-HATVTVCHSKTKNIQ 208 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~-~ATVtichs~T~~l~ 208 (216)
+.+++|+|.|.+..+|+.++..|+++ |++|+...+....+.
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~ 63 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLG 63 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTG
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhh
Confidence 57899999999999999999999998 999999987655443
No 180
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=87.95 E-value=0.97 Score=39.08 Aligned_cols=54 Identities=22% Similarity=0.203 Sum_probs=41.5
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
.+||.....+..|++.++ -.|++|+|+|.|.-+|.-++.++...||.|+.+.+.
T Consensus 150 ~l~~~~~ta~~~l~~~~~-~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~ 203 (347)
T 2hcy_A 150 PILCAGITVYKALKSANL-MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG 203 (347)
T ss_dssp GGGTHHHHHHHHHHTTTC-CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHhhhHHHHHHHHHhcCC-CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC
Confidence 456654445555655543 369999999999999999999999999999887653
No 181
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=87.87 E-value=0.15 Score=43.53 Aligned_cols=43 Identities=12% Similarity=0.195 Sum_probs=36.3
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCC---EEEEecCCCCChHH
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHA---TVTVCHSKTKNIQD 209 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~A---TVtichs~T~~l~~ 209 (216)
+++||.|+|.|-|.-+|+-++..|.++|+ +|.++.+....+++
T Consensus 30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~ 75 (287)
T 3rku_A 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEE 75 (287)
T ss_dssp HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHH
Confidence 36899999999999999999999999888 99998765544443
No 182
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=87.77 E-value=0.56 Score=42.80 Aligned_cols=129 Identities=12% Similarity=0.101 Sum_probs=83.9
Q ss_pred HHHHHHcCcceEEEeCCCCCC----HHHHHHHHHHhcCCCCccEEEEeCCC-CCCCCCCHHHHhhhcCCCCC-cccC---
Q psy7981 63 MKAAKEIGIDAQHVKLPRSIT----EIELLSRLKKLNEDPSVHGIIVQMPL-DSDNDINAMLVTDSVSPEKD-VDGL--- 133 (216)
Q Consensus 63 ~k~a~~~Gi~~~~~~l~~~~~----~~el~~~I~~lN~D~~V~GIlvqlPL-~~P~~id~~~i~~~I~p~KD-VDG~--- 133 (216)
.-++.++|.++.... ...+ -|-+.++++-|+.= +|+|++-.|. .+..|-..+.+.+... ++ -+|+
T Consensus 82 E~A~~~LGg~~i~l~--~~~ssl~kGEsl~DTarvLs~y--~D~IviRh~~~~g~~~~~~~~la~~~~--~~~~~~v~~~ 155 (399)
T 3q98_A 82 ASALNLLGLAQQDLD--EGKSQIAHGETVRETANMISFC--ADAIGIRDDMYLGAGNAYMREVGAALD--DGYKQGVLPQ 155 (399)
T ss_dssp HHHHHHHTCEEEECC---------CCTTHHHHHHHTCTT--EEEEEEEECCCCCC---HHHHHHHHHH--HHHHTTSCSS
T ss_pred HHHHHHcCCeEEEeC--CccccCCCCCCHHHHHHHHHhh--CcEEEEeccccCCcchHHHHHHHHHhh--hhcccccccC
Confidence 678899999876543 2221 24577788888654 9999999874 1122333333433210 00 0221
Q ss_pred --CccchhHhhcCCCCCcccCCHHH-HHHHHHHhCC--CCCCCeEEEe-------cCCCcccHHHHHHhhhCCCEEEEec
Q psy7981 134 --NTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNV--TIAGTNAVVL-------GRSKIVGTPAAELLKWKHATVTVCH 201 (216)
Q Consensus 134 --~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i--~l~Gk~vvVi-------GrS~~VG~Pla~lL~~~~ATVtich 201 (216)
-.+|.| + ..+.||=+++ ++.+.++.|- .++|++|+++ ||++.|-+-+..++..-|+.|++|.
T Consensus 156 ~~PVINal----~--d~~HPtQaLaDl~TI~E~~G~~~~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~ 229 (399)
T 3q98_A 156 RPALVNLQ----C--DIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAH 229 (399)
T ss_dssp CCEEEEEE----C--SSCCHHHHHHHHHHHHHHHSSSGGGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEEC
T ss_pred CCcEEeCC----C--CCcCcHHHHHHHHHHHHHhCCccccCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEEC
Confidence 235653 2 3688998888 6777788874 4899999998 6777888999888888899999996
Q ss_pred CC
Q psy7981 202 SK 203 (216)
Q Consensus 202 s~ 203 (216)
=.
T Consensus 230 P~ 231 (399)
T 3q98_A 230 PE 231 (399)
T ss_dssp CT
T ss_pred Cc
Confidence 44
No 183
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=87.73 E-value=0.38 Score=37.95 Aligned_cols=54 Identities=11% Similarity=0.034 Sum_probs=38.7
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
.+||...-.+..|.+..---.|++|+|+|.+.-+|.-++.++...|++|+.+.+
T Consensus 18 ~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~ 71 (198)
T 1pqw_A 18 TFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG 71 (198)
T ss_dssp HHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred HhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC
Confidence 345433334444433322237999999999999999999999999999988764
No 184
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=87.63 E-value=0.84 Score=40.51 Aligned_cols=38 Identities=21% Similarity=0.161 Sum_probs=33.8
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.++.||++.|||-+.+ |+.+|..|...|+.|+.+...
T Consensus 166 ~~~l~gktiGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~ 203 (340)
T 4dgs_A 166 GHSPKGKRIGVLGLGQI-GRALASRAEAFGMSVRYWNRS 203 (340)
T ss_dssp CCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSS
T ss_pred cccccCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCC
Confidence 46899999999999876 999999999999999988754
No 185
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=87.61 E-value=0.53 Score=40.13 Aligned_cols=36 Identities=19% Similarity=0.223 Sum_probs=31.8
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+++++|+|.|.+..+|+.++..|+++|++|+.+...
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999999999999999999999988654
No 186
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=87.60 E-value=0.69 Score=40.30 Aligned_cols=38 Identities=16% Similarity=0.157 Sum_probs=33.6
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.++.||+|.|||-+.+ |++++..|...|+.|+.+...
T Consensus 139 ~~~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~d~~ 176 (311)
T 2cuk_A 139 GLDLQGLTLGLVGMGRI-GQAVAKRALAFGMRVVYHART 176 (311)
T ss_dssp BCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSS
T ss_pred CcCCCCCEEEEEEECHH-HHHHHHHHHHCCCEEEEECCC
Confidence 35799999999998776 999999999999999988754
No 187
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=87.55 E-value=0.38 Score=41.25 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=30.4
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCC-CEEEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKH-ATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~-ATVtichs~T 204 (216)
+++|++|+|.|.+..+|+-++..|+++| ++|+++....
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~ 81 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLK 81 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCS
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 4678999999999999999999999999 9999987643
No 188
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=87.47 E-value=0.72 Score=39.78 Aligned_cols=60 Identities=12% Similarity=0.006 Sum_probs=44.3
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
.+||.+..++..+.+..---.|++|+|+|.+.-||.-.+.++...||+|+.+.+....++
T Consensus 124 ~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 183 (340)
T 3gms_A 124 QMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTE 183 (340)
T ss_dssp TSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHH
T ss_pred hhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 346666666665543322236999999999999999999999999999988765544443
No 189
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=87.46 E-value=0.37 Score=40.93 Aligned_cols=40 Identities=18% Similarity=0.259 Sum_probs=34.9
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCC-------CEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKH-------ATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~-------ATVtichs~T 204 (216)
++.+.|++|+|.|.+..+|.-++..|+++| ++|+++....
T Consensus 9 ~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~ 55 (342)
T 2hrz_A 9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQ 55 (342)
T ss_dssp CSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSC
T ss_pred CCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccC
Confidence 345789999999999999999999999999 8999886543
No 190
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=87.46 E-value=0.46 Score=45.06 Aligned_cols=38 Identities=29% Similarity=0.252 Sum_probs=33.7
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
..++.||.|+|.|.|.=+|+-++..|.++||+|.++..
T Consensus 14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r 51 (613)
T 3oml_A 14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDL 51 (613)
T ss_dssp -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 35789999999999999999999999999999999864
No 191
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=87.43 E-value=0.62 Score=41.11 Aligned_cols=38 Identities=16% Similarity=0.264 Sum_probs=33.5
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.++.||++.|||-+.+ |+.++..|...|+.|+++...
T Consensus 159 ~~~l~g~~vgIIG~G~i-G~~vA~~l~~~G~~V~~~dr~ 196 (333)
T 3ba1_A 159 TTKFSGKRVGIIGLGRI-GLAVAERAEAFDCPISYFSRS 196 (333)
T ss_dssp CCCCTTCCEEEECCSHH-HHHHHHHHHTTTCCEEEECSS
T ss_pred ccccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCC
Confidence 45899999999998765 999999999999999998654
No 192
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=87.26 E-value=0.58 Score=40.66 Aligned_cols=38 Identities=26% Similarity=0.284 Sum_probs=34.2
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCC-CEEEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKH-ATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~-ATVtichs~T 204 (216)
.++|++|+|.|.+..+|+-++..|+++| ++|+.+....
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~ 67 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLL 67 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCT
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCC
Confidence 4689999999999999999999999999 9999986543
No 193
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=87.22 E-value=0.39 Score=35.12 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=28.6
Q ss_pred CCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 170 GTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 170 Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+++|+|+|- ..+|..++..|.+.|..|+++...
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECC
Confidence 578999997 677999999999999999999764
No 194
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=87.17 E-value=0.63 Score=40.78 Aligned_cols=38 Identities=16% Similarity=0.122 Sum_probs=33.6
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.++.||+|.|||-+.+ |+.+|..|...|+.|+.+...
T Consensus 134 ~~~l~g~tvGIiG~G~I-G~~vA~~l~~~G~~V~~~dr~ 171 (315)
T 3pp8_A 134 EYTREEFSVGIMGAGVL-GAKVAESLQAWGFPLRCWSRS 171 (315)
T ss_dssp CCCSTTCCEEEECCSHH-HHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEEcCC
Confidence 45789999999999876 999999999999999988643
No 195
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=87.15 E-value=0.39 Score=41.10 Aligned_cols=38 Identities=13% Similarity=0.046 Sum_probs=34.1
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
++.+++|+|.|.+..+|+-++..|+++|++|+++....
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 61 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFA 61 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46789999999999999999999999999999986543
No 196
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=87.06 E-value=0.56 Score=41.02 Aligned_cols=39 Identities=13% Similarity=0.165 Sum_probs=33.8
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.++.|++|.|||-+. +|++++..|...|+.|+.+.....
T Consensus 151 ~~l~g~~vgIIG~G~-iG~~iA~~l~~~G~~V~~~d~~~~ 189 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGR-IGQAIARRLKPFGVQRFLYTGRQP 189 (330)
T ss_dssp CCCTTCEEEEECCSH-HHHHHHHHHGGGTCCEEEEESSSC
T ss_pred cCCCCCEEEEECcCH-HHHHHHHHHHHCCCEEEEECCCCc
Confidence 578999999999855 599999999999999999886543
No 197
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=86.93 E-value=0.59 Score=41.57 Aligned_cols=39 Identities=21% Similarity=0.224 Sum_probs=34.5
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+.++.||+|.|||-+.+ |+++|..|...|+.|+.+....
T Consensus 143 ~~~l~gktvgIiGlG~I-G~~vA~~l~~~G~~V~~~d~~~ 181 (343)
T 2yq5_A 143 SNEIYNLTVGLIGVGHI-GSAVAEIFSAMGAKVIAYDVAY 181 (343)
T ss_dssp BCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSC
T ss_pred ccccCCCeEEEEecCHH-HHHHHHHHhhCCCEEEEECCCh
Confidence 45789999999999876 9999999999999999987654
No 198
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=86.79 E-value=0.66 Score=40.25 Aligned_cols=37 Identities=24% Similarity=0.214 Sum_probs=33.2
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
.++.||+|.|||-+.+ |++++..|...|+.|+.+...
T Consensus 118 ~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~ 154 (290)
T 3gvx_A 118 TLLYGKALGILGYGGI-GRRVAHLAKAFGMRVIAYTRS 154 (290)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHHHTCEEEEECSS
T ss_pred eeeecchheeeccCch-hHHHHHHHHhhCcEEEEEecc
Confidence 3689999999999876 999999999999999998754
No 199
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=86.67 E-value=0.68 Score=40.71 Aligned_cols=39 Identities=23% Similarity=0.238 Sum_probs=34.2
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+.++.|++|.|||-+.+ |++++..|...|+.|+.+....
T Consensus 140 ~~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~ 178 (333)
T 1dxy_A 140 GKELGQQTVGVMGTGHI-GQVAIKLFKGFGAKVIAYDPYP 178 (333)
T ss_dssp CCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSC
T ss_pred ccCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCc
Confidence 46899999999999775 9999999999999999887543
No 200
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=86.64 E-value=0.93 Score=39.13 Aligned_cols=52 Identities=19% Similarity=0.169 Sum_probs=40.5
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
.+||.....+..|+..++ -.|++|+|+|.+. ||.-.+.++...||+|+.+-+
T Consensus 145 ~l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~~~~~a~~~Ga~Vi~~~~ 196 (339)
T 1rjw_A 145 PIFCAGVTTYKALKVTGA-KPGEWVAIYGIGG-LGHVAVQYAKAMGLNVVAVDI 196 (339)
T ss_dssp GGGTHHHHHHHHHHHHTC-CTTCEEEEECCST-THHHHHHHHHHTTCEEEEECS
T ss_pred hhhhhHHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEeC
Confidence 456655555666666654 3699999999966 999999999999999988764
No 201
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=86.51 E-value=0.7 Score=40.54 Aligned_cols=39 Identities=23% Similarity=0.195 Sum_probs=33.7
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+.++.||+|.|||-+.+ |+.++..|...|+.|+.+....
T Consensus 141 ~~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~ 179 (331)
T 1xdw_A 141 SKEVRNCTVGVVGLGRI-GRVAAQIFHGMGATVIGEDVFE 179 (331)
T ss_dssp CCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSC
T ss_pred ccCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCc
Confidence 35789999999999765 9999999999999999887543
No 202
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=86.31 E-value=1.4 Score=38.46 Aligned_cols=58 Identities=19% Similarity=0.170 Sum_probs=44.3
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
.+||.....+..|+..++...|.+|+|+|. .-||.-...++...||.|+..-+....+
T Consensus 167 ~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~ 224 (366)
T 1yqd_A 167 PLLCAGITVYSPLKYFGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKK 224 (366)
T ss_dssp GGGTHHHHHHHHHHHTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGH
T ss_pred hhhhhHHHHHHHHHhcCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 466766666677777776668999999995 6789999999999999988765433333
No 203
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=86.15 E-value=0.89 Score=39.98 Aligned_cols=39 Identities=23% Similarity=0.233 Sum_probs=34.4
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+.++.||+|.|||-+.+ |+.++..|...|+.|+.+....
T Consensus 140 ~~~l~g~tvGIIG~G~I-G~~vA~~l~~~G~~V~~~d~~~ 178 (330)
T 4e5n_A 140 GTGLDNATVGFLGMGAI-GLAMADRLQGWGATLQYHEAKA 178 (330)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHTTTSCCEEEEECSSC
T ss_pred CCccCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCCC
Confidence 46799999999999866 9999999999999999987654
No 204
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=86.06 E-value=0.8 Score=41.23 Aligned_cols=167 Identities=16% Similarity=0.068 Sum_probs=103.5
Q ss_pred hcccHHHHHHHHHHHHHHHHHHHhcCC--CCC-ceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCC---------
Q psy7981 12 ILSGTAVSGDIREGLKERVKKLKERLP--DFE-PGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLP--------- 79 (216)
Q Consensus 12 il~Gk~vA~~i~~~ik~~v~~l~~~~~--~~~-P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~--------- 79 (216)
+|+-..+..+=.+.|-+....+++... ..+ -.++.+..- .|-.---+=..++.++|.++....-.
T Consensus 26 ~lsi~dls~~ei~~ll~~A~~lk~~~~~~~L~gk~la~lF~e---pSTRTR~SFE~A~~~LGg~~i~l~~~~~ss~~~s~ 102 (359)
T 1zq6_A 26 FLNTQDWSRAELDALLTQAALFKRNKLGSELKGKSIALVFFN---PSMRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFN 102 (359)
T ss_dssp BSCGGGSCHHHHHHHHHHHHHHHHCCCCCTTTTCEEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECHHHHSCCEECS
T ss_pred cCchhhCCHHHHHHHHHHHHHHHhcccccccCCCEEEEEeCC---CCcchhhhHHHHHHHcCCeEEEeCCCccccccccc
Confidence 444444544333445455555654211 011 244554443 33333334578899999998766432
Q ss_pred --------CCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCC---------HHHHhhhcCCCCCcccCCccchhHhh
Q psy7981 80 --------RSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDIN---------AMLVTDSVSPEKDVDGLNTINEGRVA 142 (216)
Q Consensus 80 --------~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id---------~~~i~~~I~p~KDVDG~~~~n~G~l~ 142 (216)
...+-+|-...+..+ +|+|.+--| |...| .+.+.+.. + +-.+|.|
T Consensus 103 ~~~vm~~~kgEsl~DTarvLs~y-----~D~IviR~~---~~~~~~~~~~~~~~~~~lA~~~----~---vPVINag--- 164 (359)
T 1zq6_A 103 LGTVMDGDTEEHIAEVARVLGRY-----VDLIGVRAF---PKFVDWSKDREDQVLKSFAKYS----P---VPVINME--- 164 (359)
T ss_dssp SSCCCCSSCCEEHHHHHHHHHHH-----CSEEEEECC---CCSSCHHHHTTCHHHHHHHHHC----S---SCEEESS---
T ss_pred ccccccCCCCCcHHHHHHHHHHh-----CcEEEEecc---ccccccccccchHHHHHHHHhC----C---CCEEeCC---
Confidence 122445555555555 779999887 23322 22232221 2 3345642
Q ss_pred cCCCCCcccCCHHH-HHHHHHHhCCC-CCCCe--EEEecC----CCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 143 IGDMNGFIPCTPNG-VLELIKRTNVT-IAGTN--AVVLGR----SKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 143 ~~~~~~~~PcTa~a-v~~lL~~~~i~-l~Gk~--vvViGr----S~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+ .. .||=+++ ++.+.+++|-+ ++|++ |++||- ++.|.+-+..+|..-|++|++|+=.
T Consensus 165 --~-g~-HPtQaLaDl~TI~E~~g~~~l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~G~~v~~~~P~ 229 (359)
T 1zq6_A 165 --T-IT-HPCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPT 229 (359)
T ss_dssp --S-SC-CHHHHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred --C-CC-CcHHHHHHHHHHHHHhCCCcccCCeeEEEEEecccccccchHHHHHHHHHHcCCEEEEEcCc
Confidence 1 25 9998888 67778888854 89999 889999 8999999999999999999999765
No 205
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=86.04 E-value=1 Score=39.82 Aligned_cols=40 Identities=10% Similarity=-0.070 Sum_probs=34.7
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhh-hCCCEEEEecCCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLK-WKHATVTVCHSKTK 205 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~-~~~ATVtichs~T~ 205 (216)
+.++.||++.|||-+.+ |+.++..|. ..|+.|+.+.....
T Consensus 158 ~~~l~g~~vgIIG~G~I-G~~vA~~l~~~~G~~V~~~d~~~~ 198 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAI-QKEIARKAVHGLGMKLVYYDVAPA 198 (348)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCCEEEEECSSCC
T ss_pred CcCCCCCEEEEEEECHH-HHHHHHHHHHhcCCEEEEECCCCc
Confidence 56899999999998665 999999999 99999999876543
No 206
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=85.89 E-value=1 Score=41.16 Aligned_cols=38 Identities=18% Similarity=0.273 Sum_probs=34.3
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.++.||++.|||-+.+ |+++|..|...|+.|+.+...
T Consensus 151 ~~el~gktvGIIGlG~I-G~~vA~~l~~~G~~V~~yd~~ 188 (416)
T 3k5p_A 151 SREVRGKTLGIVGYGNI-GSQVGNLAESLGMTVRYYDTS 188 (416)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECTT
T ss_pred CccCCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCc
Confidence 46899999999999876 999999999999999998753
No 207
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=85.83 E-value=1.2 Score=38.64 Aligned_cols=36 Identities=31% Similarity=0.352 Sum_probs=32.4
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
++.||++.|||-+.+ |+++|..|...|+.|+.+...
T Consensus 121 ~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~dr~ 156 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEI-GTRVGKILAALGAQVRGFSRT 156 (303)
T ss_dssp CCTTCEEEEESCSTH-HHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEECCC
Confidence 699999999998776 999999999999999988653
No 208
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=85.77 E-value=3.9 Score=34.56 Aligned_cols=93 Identities=11% Similarity=-0.006 Sum_probs=56.4
Q ss_pred hhcccHH-HHHHHHHHHHHHHHHHHhc--------CCCCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCC
Q psy7981 11 QILSGTA-VSGDIREGLKERVKKLKER--------LPDFEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPR 80 (216)
Q Consensus 11 ~il~Gk~-vA~~i~~~ik~~v~~l~~~--------~~~~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~ 80 (216)
++|+|++ |+++-++.+.+.+++|-=. ..+....+++|.-. .++--..+++...+.|++.|..+.......
T Consensus 29 r~Ln~~~~vs~~tr~rV~~~~~~lgY~pn~~a~~l~~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 108 (344)
T 3kjx_A 29 RVLRNRGDVSDATRARVLAAAKELGYVPNKIAGALASNRVNLVAVIIPSLSNMVFPEVLTGINQVLEDTELQPVVGVTDY 108 (344)
T ss_dssp HHHTTCSCCCHHHHHHHHHHHHHHTCCCCCCCSCSTTSCCSEEEEEESCSSSSSHHHHHHHHHHHHTSSSSEEEEEECTT
T ss_pred HHHcCCCCCCHHHHHHHHHHHHHhCCCCCHHHHHhhcCCCCEEEEEeCCCCcHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 5677643 5566666666666655200 00122345555432 244445667888999999999987765443
Q ss_pred CCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 81 SITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 81 ~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
+.+...+.++.+.. ..|+||++.
T Consensus 109 --~~~~~~~~i~~l~~-~~vdGiIi~ 131 (344)
T 3kjx_A 109 --LPEKEEKVLYEMLS-WRPSGVIIA 131 (344)
T ss_dssp --CHHHHHHHHHHHHT-TCCSEEEEE
T ss_pred --CHHHHHHHHHHHHh-CCCCEEEEE
Confidence 44555566666654 479999996
No 209
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=85.65 E-value=0.64 Score=38.49 Aligned_cols=40 Identities=28% Similarity=0.302 Sum_probs=29.2
Q ss_pred HhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 163 RTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 163 ~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
++..++.+++|.|||-+. +|.+++..|.+.|..|+++...
T Consensus 12 ~~~~~~~~~kIgiIG~G~-mG~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 12 HENLYFQGMKIAVLGTGT-VGRTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp -------CCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESC
T ss_pred ccccccCCCeEEEECCCH-HHHHHHHHHHHCCCEEEEEeCC
Confidence 456788999999999655 5999999999999999998653
No 210
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=85.31 E-value=1.9 Score=36.68 Aligned_cols=94 Identities=17% Similarity=0.098 Sum_probs=40.0
Q ss_pred hhcccHH-HHHHHHHHHHHHHHHHHhc--------CCCCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCC
Q psy7981 11 QILSGTA-VSGDIREGLKERVKKLKER--------LPDFEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPR 80 (216)
Q Consensus 11 ~il~Gk~-vA~~i~~~ik~~v~~l~~~--------~~~~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~ 80 (216)
++|+|+. |+++-++.+.+.+++|-=. ..+....+++|.-. .++--..+++...+.|++.|.++.......
T Consensus 25 r~Ln~~~~vs~~tr~rV~~~a~~lgY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 104 (333)
T 3jvd_A 25 RALSGKGYVSPQTREKVQAAAKELNYVPNQLAKALREHRSALVGVIVPDLSNEYYSESLQTIQQDLKAAGYQMLVAEANS 104 (333)
T ss_dssp ---------------------------------------CCEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECCS
T ss_pred HHHcCCCCCCHHHHHHHHHHHHHHCCCcCHHHHHhhcCCCCEEEEEeCCCcChHHHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 5687754 4444555554444433100 01223345555543 233444557788899999999998876554
Q ss_pred CCCHHHHHHHHHHhcCCCCccEEEEeCC
Q psy7981 81 SITEIELLSRLKKLNEDPSVHGIIVQMP 108 (216)
Q Consensus 81 ~~~~~el~~~I~~lN~D~~V~GIlvqlP 108 (216)
.+.-.+.++.+.. ..|+||++.-+
T Consensus 105 ---~~~~~~~~~~l~~-~~vdGiIi~~~ 128 (333)
T 3jvd_A 105 ---VQAQDVVMESLIS-IQAAGIIHVPV 128 (333)
T ss_dssp ---HHHHHHHHHHHHH-HTCSEEEECCC
T ss_pred ---hHHHHHHHHHHHh-CCCCEEEEcch
Confidence 3444444544432 36999998633
No 211
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=85.17 E-value=0.85 Score=39.70 Aligned_cols=39 Identities=18% Similarity=0.222 Sum_probs=34.2
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+.++.|++|.|||-+.+ |++++..|...|+.|+.+....
T Consensus 137 ~~~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~d~~~ 175 (313)
T 2ekl_A 137 GLELAGKTIGIVGFGRI-GTKVGIIANAMGMKVLAYDILD 175 (313)
T ss_dssp CCCCTTCEEEEESCSHH-HHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCCCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCCc
Confidence 56899999999998765 9999999999999999887543
No 212
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=85.13 E-value=0.84 Score=38.47 Aligned_cols=39 Identities=23% Similarity=0.084 Sum_probs=32.0
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
+-.+++|+|.|.+..+|+-++..|+++|++|+++.....
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 49 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRS 49 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 346899999999999999999999999999999876543
No 213
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=85.13 E-value=0.8 Score=38.34 Aligned_cols=38 Identities=16% Similarity=0.240 Sum_probs=32.9
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.+.||+|+|||-+. +|--+|..|.+.+..||+++....
T Consensus 142 ~~~~k~vvViGgG~-ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 142 FFKNKRLFVIGGGD-SAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp GGTTCEEEEECCSH-HHHHHHHHHTTTCSEEEEECSSSS
T ss_pred ccCCCEEEEECCCH-HHHHHHHHHHhcCCEEEEEecccc
Confidence 45799999999765 599999999999999999997653
No 214
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=85.09 E-value=1.2 Score=39.44 Aligned_cols=37 Identities=19% Similarity=0.173 Sum_probs=33.3
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
.++.||++.|||-+.+ |++++..|...|+.|+.+...
T Consensus 164 ~~l~g~tvGIIG~G~I-G~~vA~~l~~~G~~V~~~d~~ 200 (347)
T 1mx3_A 164 ARIRGETLGIIGLGRV-GQAVALRAKAFGFNVLFYDPY 200 (347)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTT
T ss_pred cCCCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEECCC
Confidence 4799999999998876 999999999999999998754
No 215
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=84.93 E-value=0.96 Score=39.32 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=33.9
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+..+++|+|.|.+..+|+-++..|+++|+.|+++.+..
T Consensus 26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 63 (379)
T 2c5a_A 26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKK 63 (379)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCC
Confidence 34689999999999999999999999999999987654
No 216
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=84.78 E-value=1 Score=39.57 Aligned_cols=38 Identities=18% Similarity=0.155 Sum_probs=33.5
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.++.|++|.|||-+.+ |+.++..|...|+.|+.+....
T Consensus 142 ~~l~g~~vgIIG~G~i-G~~vA~~l~~~G~~V~~~d~~~ 179 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAI-GKAIARRLIPFGVKLYYWSRHR 179 (333)
T ss_dssp CCSTTCEEEEECCSHH-HHHHHHHHGGGTCEEEEECSSC
T ss_pred CCCCcCEEEEEccCHH-HHHHHHHHHHCCCEEEEECCCc
Confidence 6899999999998665 9999999999999999887543
No 217
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.72 E-value=0.65 Score=36.22 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=32.0
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhC-CCEEEEecCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWK-HATVTVCHSK 203 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~-~ATVtichs~ 203 (216)
.++.|++|+|+|- ..+|..++..|... |+.|+++...
T Consensus 35 ~~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 35 INPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp BCCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred cCCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECC
Confidence 4677999999995 67799999999998 9999998653
No 218
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=84.72 E-value=3 Score=35.09 Aligned_cols=94 Identities=20% Similarity=0.168 Sum_probs=39.9
Q ss_pred hhcccHH-HHHHHHHHHHHHHHHHHhc--------CCCCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCC
Q psy7981 11 QILSGTA-VSGDIREGLKERVKKLKER--------LPDFEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPR 80 (216)
Q Consensus 11 ~il~Gk~-vA~~i~~~ik~~v~~l~~~--------~~~~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~ 80 (216)
++|+|+. |+++-++.+.+.+++|-=. ..+....+++|.-. +++--..+++...+.|++.|..........
T Consensus 21 rvln~~~~vs~~tr~rV~~~~~~lgY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~ 100 (330)
T 3ctp_A 21 RHLNNTGYVSEDAREKIQKVVDELNYTPNALARAMFTKNSKTIGLMVPNISNPFFNQMASVIEEYAKNKGYTLFLCNTDD 100 (330)
T ss_dssp ---------------------------------------CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHcCCCCCCHHHHHHHHHHHHHhCCCcCHHHHHhhcCCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 5788864 6665666555544443100 00223345555532 233334456778889999999888765433
Q ss_pred CCCHHHHHHHHHHhcCCCCccEEEEeCCC
Q psy7981 81 SITEIELLSRLKKLNEDPSVHGIIVQMPL 109 (216)
Q Consensus 81 ~~~~~el~~~I~~lN~D~~V~GIlvqlPL 109 (216)
+.++..+.++.+.. ..|+||+ .|.
T Consensus 101 --~~~~~~~~~~~l~~-~~vdgiI--~~~ 124 (330)
T 3ctp_A 101 --DKEKEKTYLEVLQS-HRVAGII--ASR 124 (330)
T ss_dssp --CHHHHHHHHHHHHH-TTCSEEE--EET
T ss_pred --ChHHHHHHHHHHHh-CCCCEEE--ECC
Confidence 44555556666653 4799999 454
No 219
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=84.51 E-value=1 Score=37.37 Aligned_cols=37 Identities=16% Similarity=0.171 Sum_probs=32.6
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.+|++++|||-+. +|--+|..|.+.|+.||+++....
T Consensus 150 ~~~~~vvViGgG~-ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 150 FRNKVLMVVGGGD-AAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp GTTSEEEEECSSH-HHHHHHHHHTTTSSEEEEECSSSS
T ss_pred cCCCeEEEECCCh-HHHHHHHHHHHhCCeeeeeccccc
Confidence 5799999999765 599999999999999999987654
No 220
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=84.49 E-value=0.54 Score=40.72 Aligned_cols=37 Identities=11% Similarity=0.123 Sum_probs=33.2
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhC-CC-EEEEecCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWK-HA-TVTVCHSK 203 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~-~A-TVtichs~ 203 (216)
.++||+|+|.|.+..+|+.++..|+++ |+ .|+++.+.
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~ 56 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRD 56 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESC
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 468999999999999999999999999 98 99988654
No 221
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=84.45 E-value=0.45 Score=42.29 Aligned_cols=40 Identities=15% Similarity=0.295 Sum_probs=34.7
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCC-CEEEEecCCCCCh
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKH-ATVTVCHSKTKNI 207 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~-ATVtichs~T~~l 207 (216)
++||+|+|.|.+..+|+-++..|+++| +.|+++......+
T Consensus 33 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~ 73 (399)
T 3nzo_A 33 VSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNM 73 (399)
T ss_dssp HHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred hCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchH
Confidence 479999999999999999999999999 7999987654333
No 222
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=84.39 E-value=2.3 Score=34.27 Aligned_cols=65 Identities=18% Similarity=0.107 Sum_probs=46.4
Q ss_pred ceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 42 PGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 42 P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
|++++|.-+ +++-.....+...++|++.|.++.....+.+.+.++-.+.++.+-+..+|+||++.
T Consensus 1 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~ 66 (276)
T 3ksm_A 1 PKLLLVLKGDSNAYWRQVYLGAQKAADEAGVTLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILA 66 (276)
T ss_dssp CEEEEECSCSSSTHHHHHHHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred CeEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 356666543 23444556788899999999998877655556667777778877766559999986
No 223
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=84.32 E-value=1.1 Score=39.50 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=34.1
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.++.||+|.|||-+.+ |+++|..|...|+.|+.+...
T Consensus 132 ~~~l~gktvGIiGlG~I-G~~vA~~l~~~G~~V~~~dr~ 169 (324)
T 3evt_A 132 TSTLTGQQLLIYGTGQI-GQSLAAKASALGMHVIGVNTT 169 (324)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESS
T ss_pred CccccCCeEEEECcCHH-HHHHHHHHHhCCCEEEEECCC
Confidence 56899999999999876 999999999999999988653
No 224
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=84.28 E-value=1.6 Score=38.78 Aligned_cols=40 Identities=20% Similarity=0.239 Sum_probs=34.4
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
++.|++|+|+|.+ .+|...+.++...||.|+++......+
T Consensus 169 ~l~g~~V~ViGaG-~iG~~aa~~a~~~Ga~V~~~d~~~~~~ 208 (384)
T 1l7d_A 169 TVPPARVLVFGVG-VAGLQAIATAKRLGAVVMATDVRAATK 208 (384)
T ss_dssp EECCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 6789999999975 679999999999999999998764433
No 225
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=84.15 E-value=1 Score=39.11 Aligned_cols=38 Identities=13% Similarity=0.269 Sum_probs=33.7
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.++.|++|.|||-+.+ |++++..|...|+.|+.+....
T Consensus 138 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~ 175 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRI-GYQVAKIANALGMNILLYDPYP 175 (307)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSC
T ss_pred cccCCceEEEEccCHH-HHHHHHHHHHCCCEEEEECCCC
Confidence 5799999999998765 9999999999999999887644
No 226
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=84.09 E-value=2.5 Score=36.21 Aligned_cols=85 Identities=9% Similarity=0.236 Sum_probs=47.3
Q ss_pred hhcccHH-HHHHHHHHHHHHHHHHHhcCCCCC-c-------------eEEEEEeCC------CcchHHHHHHHHHHHHHc
Q psy7981 11 QILSGTA-VSGDIREGLKERVKKLKERLPDFE-P-------------GLAIVQVGG------REDSNVYIRMKMKAAKEI 69 (216)
Q Consensus 11 ~il~Gk~-vA~~i~~~ik~~v~~l~~~~~~~~-P-------------~LaiI~vg~------~~as~~Yv~~k~k~a~~~ 69 (216)
++|+|++ |+++-++.+.+.+++| |+. | .+++|.-.. +|-...+++...+.|+
T Consensus 28 rvLn~~~~Vs~~tr~rV~~~a~~l-----gY~~pn~~a~~l~~~~s~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~-- 100 (366)
T 3h5t_A 28 NAYNRPEQLSAELRQRILDTAEDM-----GYLGPDPVARSLRTRRAGAIGVLLTEDLTYAFEDMASVDFLAGVAQAAG-- 100 (366)
T ss_dssp HHHHCGGGSCHHHHHHHHHHHHHT-----TC--------------CCEEEEEESSCTTHHHHSHHHHHHHHHHHHHSS--
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHh-----CCCCCCHHHHHhhcCCCCEEEEEecCCccccccCHHHHHHHHHHHHHHh--
Confidence 5677753 5666666666555554 333 3 355554331 2222334556666666
Q ss_pred CcceEEEeCCCCC--CHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 70 GIDAQHVKLPRSI--TEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 70 Gi~~~~~~l~~~~--~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
|..+..+....+. .+.++++.+. . ..|+|||+.
T Consensus 101 g~~~~~~~~~~~~~~~~~~~~~~l~---~-~~vdGiIi~ 135 (366)
T 3h5t_A 101 DTQLTLIPASPASSVDHVSAQQLVN---N-AAVDGVVIY 135 (366)
T ss_dssp SCEEEEEECCCCTTCCHHHHHHHHH---T-CCCSCEEEE
T ss_pred hCCEEEEEcCCCccHHHHHHHHHHH---h-CCCCEEEEe
Confidence 8887777666443 3555544443 2 479999987
No 227
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=83.99 E-value=2.8 Score=35.83 Aligned_cols=93 Identities=15% Similarity=0.172 Sum_probs=38.5
Q ss_pred hhcccHH-HHHHHHHHHHHHHHHHHhc--------CCCCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCC
Q psy7981 11 QILSGTA-VSGDIREGLKERVKKLKER--------LPDFEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPR 80 (216)
Q Consensus 11 ~il~Gk~-vA~~i~~~ik~~v~~l~~~--------~~~~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~ 80 (216)
++|+|+. |+++-++.+.+.+++|-=. ..+....+++|.-. .++--..+++...+.|++.|..+.......
T Consensus 27 rvLn~~~~Vs~~tr~rV~~aa~~lgY~pn~~ar~l~~~~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 106 (348)
T 3bil_A 27 RALADNPAVAASTRERIQQLASDLGYRANAQARALRSSRSNTIGVIVPSLINHYFAAMVTEIQSTASKAGLATIITNSNE 106 (348)
T ss_dssp -----------------------------------------CEEEEESCSSSHHHHHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHhCCCcCHHHHhhhcCCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 5788863 5555555555544443100 00122345555432 233334456778889999999988765433
Q ss_pred CCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 81 SITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 81 ~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
+.+...+.++.+. ...|+||++.
T Consensus 107 --~~~~~~~~~~~l~-~~~vdgiI~~ 129 (348)
T 3bil_A 107 --DATTMSGSLEFLT-SHGVDGIICV 129 (348)
T ss_dssp --CHHHHHHHHHHHH-HTTCSCEEEC
T ss_pred --CHHHHHHHHHHHH-hCCCCEEEEe
Confidence 3444455565554 3469999985
No 228
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=83.89 E-value=1 Score=39.63 Aligned_cols=38 Identities=21% Similarity=0.189 Sum_probs=34.1
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.++.||++.|||-+.+ |+++|..|...|+.|+.+...
T Consensus 135 ~~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~ 172 (324)
T 3hg7_A 135 YQGLKGRTLLILGTGSI-GQHIAHTGKHFGMKVLGVSRS 172 (324)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSS
T ss_pred CcccccceEEEEEECHH-HHHHHHHHHhCCCEEEEEcCC
Confidence 46899999999999976 999999999999999998653
No 229
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=83.87 E-value=1.7 Score=37.72 Aligned_cols=55 Identities=22% Similarity=0.202 Sum_probs=42.3
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.+||.....+..|++.++...|.+|+|+|. .-||.-...++...||+|+..-+..
T Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~ 214 (357)
T 2cf5_A 160 PLLCAGVTVYSPLSHFGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSN 214 (357)
T ss_dssp GGGTHHHHHHHHHHHTSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESST
T ss_pred hhhhhHHHHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCh
Confidence 456666666666777676558999999995 6689999999888999988776543
No 230
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=83.83 E-value=8.6 Score=30.70 Aligned_cols=64 Identities=17% Similarity=0.063 Sum_probs=48.1
Q ss_pred ceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeC
Q psy7981 42 PGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQM 107 (216)
Q Consensus 42 P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvql 107 (216)
|+.+|| .|.+ ++.-+.+.-.+.++++||.|+.......-+.+++.+.+++..++...+-||.--
T Consensus 3 ~~V~Ii-mgs~-SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~~~~~~~~a~~~~~~~ViIa~A 66 (159)
T 3rg8_A 3 PLVIIL-MGSS-SDMGHAEKIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEYEALDRPKLYITIA 66 (159)
T ss_dssp CEEEEE-ESSG-GGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHHHTSCSCEEEEEEC
T ss_pred CeEEEE-ECcH-HHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHhhhcCCCcEEEEEC
Confidence 555554 4533 345556677789999999999999999999999999999998654455566543
No 231
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=83.67 E-value=10 Score=31.80 Aligned_cols=89 Identities=13% Similarity=0.123 Sum_probs=41.6
Q ss_pred hhcccHH-HHHHHHHHHHHHHHHHHhcCCCCCc-------------eEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEE
Q psy7981 11 QILSGTA-VSGDIREGLKERVKKLKERLPDFEP-------------GLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQH 75 (216)
Q Consensus 11 ~il~Gk~-vA~~i~~~ik~~v~~l~~~~~~~~P-------------~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~ 75 (216)
++|+|++ ++++-++.+.+.+++| |+.| .+++|.-. .++--..+++...+.|++.|..+..
T Consensus 23 r~Ln~~~~vs~~tr~rV~~~~~~l-----gY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~ 97 (339)
T 3h5o_A 23 RVLNQPQQVSEQLREKVMQAVDAL-----AYVPSRSASTLASAKSRTVLVLIPSLANTVFLETLTGIETVLDAAGYQMLI 97 (339)
T ss_dssp ---------------------------------------------CEEEEEESCSTTCTTHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHcCCCCCCHHHHHHHHHHHHHh-----CCCcCHHHHhhhcCCCCEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 5688753 4444444444444333 3333 35554432 2444566778899999999999877
Q ss_pred EeCCCCCCHHHHHHHHHHhcCCCCccEEEEeC
Q psy7981 76 VKLPRSITEIELLSRLKKLNEDPSVHGIIVQM 107 (216)
Q Consensus 76 ~~l~~~~~~~el~~~I~~lN~D~~V~GIlvql 107 (216)
..... +.+...+.++.+.. ..|+||++.-
T Consensus 98 ~~~~~--~~~~~~~~~~~l~~-~~vdGiIi~~ 126 (339)
T 3h5o_A 98 GNSHY--DAGQELQLLRAYLQ-HRPDGVLITG 126 (339)
T ss_dssp EECTT--CHHHHHHHHHHHHT-TCCSEEEEEC
T ss_pred EeCCC--ChHHHHHHHHHHHc-CCCCEEEEeC
Confidence 65443 44555666666654 4899999863
No 232
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=83.64 E-value=0.79 Score=40.43 Aligned_cols=40 Identities=15% Similarity=0.068 Sum_probs=35.1
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
+.++.||+|.|||-+.+ |+++|..|...|+.|+.+.....
T Consensus 136 ~~~l~g~tvgIiG~G~I-G~~vA~~l~~~G~~V~~~d~~~~ 175 (334)
T 2pi1_A 136 ARELNRLTLGVIGTGRI-GSRVAMYGLAFGMKVLCYDVVKR 175 (334)
T ss_dssp BCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCC
T ss_pred ceeccCceEEEECcCHH-HHHHHHHHHHCcCEEEEECCCcc
Confidence 46799999999999866 99999999999999999876543
No 233
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=83.63 E-value=1.2 Score=37.51 Aligned_cols=55 Identities=18% Similarity=0.231 Sum_probs=41.6
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 150 IPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 150 ~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
+||.....+..|.+.+ --.|++|+|+|.|.-||.-.+.++...||+|+.+-+...
T Consensus 107 l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~ 161 (302)
T 1iz0_A 107 FPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPE 161 (302)
T ss_dssp SHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred hhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4544444455555445 447999999999999999999999999999988776433
No 234
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=83.61 E-value=1.4 Score=37.96 Aligned_cols=54 Identities=17% Similarity=0.231 Sum_probs=41.7
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhC-CCEEEEecCC
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWK-HATVTVCHSK 203 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~-~ATVtichs~ 203 (216)
.+||.....+..|++.++ -.|++|+|.|.+.-+|.-++.++... ||+|+.+.+.
T Consensus 151 ~l~~~~~ta~~~l~~~~~-~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~ 205 (347)
T 1jvb_A 151 PLTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR 205 (347)
T ss_dssp GGGTHHHHHHHHHHHTTC-CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS
T ss_pred cchhhHHHHHHHHHhcCC-CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCC
Confidence 456655555666665443 37999999999989999999999998 9999887643
No 235
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=83.61 E-value=1.2 Score=39.10 Aligned_cols=39 Identities=13% Similarity=0.190 Sum_probs=33.4
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+.++.|++|.|||-+. +|++++..|...|+.|+.+....
T Consensus 145 ~~~l~g~~vgIIG~G~-iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGR-IGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp CCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccCCCCCEEEEEccCH-HHHHHHHHHHhCCCEEEEECCCc
Confidence 4579999999999755 59999999999999999887543
No 236
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=83.58 E-value=0.9 Score=40.43 Aligned_cols=38 Identities=21% Similarity=0.184 Sum_probs=33.6
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.++.||+|.|||-+.+ |+++|..|...|+.|+.+...
T Consensus 155 ~~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~d~~ 192 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKI-GQLVAGYGRAFGMNVLVWGRE 192 (352)
T ss_dssp BCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSH
T ss_pred CccCCCCEEEEEeECHH-HHHHHHHHHhCCCEEEEECCC
Confidence 45789999999999865 999999999999999998653
No 237
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=83.57 E-value=0.74 Score=42.75 Aligned_cols=52 Identities=27% Similarity=0.222 Sum_probs=43.4
Q ss_pred cCCHHHHHHHHH----HhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEE-EEecCC
Q psy7981 151 PCTPNGVLELIK----RTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATV-TVCHSK 203 (216)
Q Consensus 151 PcTa~av~~lL~----~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATV-tichs~ 203 (216)
++|..|+...++ +.+.+++||+|+|-|- ..||.-++.+|.+.||+| +++.+.
T Consensus 216 ~aTg~Gv~~~~~~~~~~~g~~l~g~~VaVQG~-GnVG~~aa~~L~e~GakvVavsD~~ 272 (456)
T 3r3j_A 216 EATGYGVVYFAENVLKDLNDNLENKKCLVSGS-GNVAQYLVEKLIEKGAIVLTMSDSN 272 (456)
T ss_dssp THHHHHHHHHHHHHHHTTTCCSTTCCEEEECC-SHHHHHHHHHHHHHTCCBCCEECSS
T ss_pred cccchHHHHHHHHHHHHcCCCccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCC
Confidence 489998776655 4689999999999996 567999999999999997 488764
No 238
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=83.52 E-value=13 Score=30.35 Aligned_cols=65 Identities=15% Similarity=0.014 Sum_probs=43.2
Q ss_pred CCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCC
Q psy7981 40 FEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMP 108 (216)
Q Consensus 40 ~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlP 108 (216)
....+++|.--.++--..+++...+.|++.|..+.......+..+. +.++.+. ...|+||++.-+
T Consensus 11 ~~~~Igvi~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~---~~~~~l~-~~~vdgiIi~~~ 75 (289)
T 3k9c_A 11 SSRLLGVVFELQQPFHGDLVEQIYAAATRRGYDVMLSAVAPSRAEK---VAVQALM-RERCEAAILLGT 75 (289)
T ss_dssp --CEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEEBTTBCHH---HHHHHHT-TTTEEEEEEETC
T ss_pred CCCEEEEEEecCCchHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHH---HHHHHHH-hCCCCEEEEECC
Confidence 4456777663334444556788899999999999888776654444 4455553 458999999743
No 239
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=83.48 E-value=1.1 Score=38.40 Aligned_cols=53 Identities=17% Similarity=0.152 Sum_probs=39.6
Q ss_pred ccCCHHHHHHHH-HHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 150 IPCTPNGVLELI-KRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 150 ~PcTa~av~~lL-~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+||...-.+..| +..++ -.|++|+|.|.|.-+|.-.+.++...||+|+.+.+.
T Consensus 130 l~~~~~tA~~al~~~~~~-~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~ 183 (336)
T 4b7c_A 130 LGMTGMTAYFALLDVGQP-KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGG 183 (336)
T ss_dssp TSHHHHHHHHHHHHTTCC-CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccHHHHHHHHHHHhcCC-CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 344444455555 33333 379999999999999999999999999999887643
No 240
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=83.47 E-value=1.2 Score=38.07 Aligned_cols=36 Identities=17% Similarity=0.065 Sum_probs=32.2
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
-.|++|+|.|.+.-+|.-++.++...||+|+.+.+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~ 179 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVST 179 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 369999999999999999999999999999887653
No 241
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=83.19 E-value=1.4 Score=37.65 Aligned_cols=36 Identities=19% Similarity=0.247 Sum_probs=32.3
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
-.|++|+|.|.|.-+|.-++.++...||+|+++.+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~ 179 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS 179 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 369999999999999999999999999999987653
No 242
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=83.16 E-value=0.59 Score=37.89 Aligned_cols=36 Identities=17% Similarity=0.165 Sum_probs=32.2
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCC-CEEEEecCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKH-ATVTVCHSKT 204 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~-ATVtichs~T 204 (216)
..|+|+|.|.+.-+|+.++..|+++| ++|+++.+..
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 46899999999999999999999999 8999887654
No 243
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=82.92 E-value=1.2 Score=39.15 Aligned_cols=38 Identities=16% Similarity=0.118 Sum_probs=33.4
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.++.|++|.|||-+.+ |+.++..|...|+.|+.+....
T Consensus 142 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~ 179 (333)
T 1j4a_A 142 REVRDQVVGVVGTGHI-GQVFMQIMEGFGAKVITYDIFR 179 (333)
T ss_dssp CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSC
T ss_pred ccCCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEECCCc
Confidence 5789999999999775 9999999999999999887543
No 244
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=82.84 E-value=0.67 Score=42.76 Aligned_cols=39 Identities=26% Similarity=0.342 Sum_probs=29.4
Q ss_pred hCCCCCCCeEEEecCCCcccHHHHHHhhhC-CCEEEEecCC
Q psy7981 164 TNVTIAGTNAVVLGRSKIVGTPAAELLKWK-HATVTVCHSK 203 (216)
Q Consensus 164 ~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~-~ATVtichs~ 203 (216)
.++++.+++|+|+|. .-+|++++..|.+. ++.|+++.+.
T Consensus 17 ~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~ 56 (467)
T 2axq_A 17 IEGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRT 56 (467)
T ss_dssp ------CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESS
T ss_pred cccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECC
Confidence 467889999999997 77899999999988 7899999764
No 245
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=82.55 E-value=1.3 Score=39.19 Aligned_cols=39 Identities=15% Similarity=0.169 Sum_probs=34.1
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+.++.||+|.|||-+.+ |+++|..|...|+.|+.+....
T Consensus 160 ~~~l~g~tvgIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~ 198 (335)
T 2g76_A 160 GTELNGKTLGILGLGRI-GREVATRMQSFGMKTIGYDPII 198 (335)
T ss_dssp BCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSS
T ss_pred CcCCCcCEEEEEeECHH-HHHHHHHHHHCCCEEEEECCCc
Confidence 46899999999999765 9999999999999999887543
No 246
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=82.44 E-value=1.3 Score=38.71 Aligned_cols=36 Identities=11% Similarity=0.105 Sum_probs=32.9
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
.++.|+++.|||-+.+ |+.++..|...|+.|+.+..
T Consensus 142 ~~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~d~ 177 (320)
T 1gdh_A 142 EKLDNKTLGIYGFGSI-GQALAKRAQGFDMDIDYFDT 177 (320)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECS
T ss_pred cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECC
Confidence 5799999999999776 99999999999999999876
No 247
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=82.44 E-value=1.2 Score=40.81 Aligned_cols=35 Identities=17% Similarity=0.142 Sum_probs=32.4
Q ss_pred CCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 170 GTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 170 Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+++|+|.|.+..+|+.++..|+++|++|+.+....
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~ 181 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKE 181 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 78999999999999999999999999999987654
No 248
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=82.22 E-value=2.2 Score=38.06 Aligned_cols=171 Identities=17% Similarity=0.071 Sum_probs=96.6
Q ss_pred hcccHHHHHHHHHHHHHHHHHHHhcCCCC---CceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEe---------CC
Q psy7981 12 ILSGTAVSGDIREGLKERVKKLKERLPDF---EPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVK---------LP 79 (216)
Q Consensus 12 il~Gk~vA~~i~~~ik~~v~~l~~~~~~~---~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~---------l~ 79 (216)
+|+-+.+.++=.+.|-+....+++..... -..++.+..- .|-.---+=.-++.++|.++.... +.
T Consensus 26 lLsi~Dls~~ei~~ll~~A~~~k~~~~~~~L~gK~va~lF~e---pSTRTR~SFE~A~~~LGg~~i~l~~~~ss~~~~~~ 102 (359)
T 3kzn_A 26 FLNTQDWSRAELDALLTQAALFKRNKLGSELKGKSIALVFFN---PSMRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFN 102 (359)
T ss_dssp BSCGGGSCHHHHHHHHHHHHHHHHCCCCCTTTTCEEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECHHHHSCCEECS
T ss_pred ccchhhCCHHHHHHHHHHHHHHHhcCCCCcCCCCEEEEEecC---CCccHHHHHHHHHHHcCCCEEecCCCCcccccccc
Confidence 55555555444455555566666432111 1245555443 333222344778999999886553 11
Q ss_pred CC--------CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCC-----HHHHhhhcCCCCCcccCCccchhHhhcCCC
Q psy7981 80 RS--------ITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDIN-----AMLVTDSVSPEKDVDGLNTINEGRVAIGDM 146 (216)
Q Consensus 80 ~~--------~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id-----~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~ 146 (216)
.. .+.+|-...+..+ +|+|++-.. |...+ +....+.+.-.-+ +-.+|. |
T Consensus 103 ~~s~~~~~k~Es~~DTarvls~y-----~D~iviR~~---~~~~~~~~~~~~~~~~~~a~~~~---vPVIN~-----g-- 164 (359)
T 3kzn_A 103 LGTVMDGDTEEHIAEVARVLGRY-----VDLIGVRAF---PKFVDWSKDREDQVLKSFAKYSP---VPVINM-----E-- 164 (359)
T ss_dssp SSCCCCSSCCEEHHHHHHHHHHH-----CSEEEEECC---CCSSCHHHHTTCHHHHHHHHHCS---SCEEES-----S--
T ss_pred ccccccCcccchHHHHHHHHhcc-----CcEEEEEcc---ccccchhcchhhHHHHHHHHhCC---CcccCc-----c--
Confidence 11 2234444444444 788888632 22111 0111111111112 223453 3
Q ss_pred CCcccCCHHH-HHHHHHHhCC-CCCCCeEEEecC------CCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 147 NGFIPCTPNG-VLELIKRTNV-TIAGTNAVVLGR------SKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 147 ~~~~PcTa~a-v~~lL~~~~i-~l~Gk~vvViGr------S~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
....||=+++ ++.+.+++|. +++|++++++|- .+.|-+-+..++..-|+.|++|.-.
T Consensus 165 ~~~HPtQaL~Dl~Ti~e~~G~~dl~g~kv~~~~~~~gd~~~~~Va~S~~~~~~~~g~~v~~~~P~ 229 (359)
T 3kzn_A 165 TITHPCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPT 229 (359)
T ss_dssp SSCCHHHHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cccCchHHHHHHHHHHHHcCCccccCCeEEEEEeecCCccccchhhhhHHHHHhccccEEEEecc
Confidence 2458997777 6677777774 799999998864 4567778888888899999998764
No 249
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=81.90 E-value=1.3 Score=39.64 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=33.7
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.++.||++.|||-+.+ |+++|..|...|+.|+.+...
T Consensus 171 ~~~l~gktvGIIGlG~I-G~~vA~~l~~fG~~V~~~d~~ 208 (365)
T 4hy3_A 171 ARLIAGSEIGIVGFGDL-GKALRRVLSGFRARIRVFDPW 208 (365)
T ss_dssp CCCSSSSEEEEECCSHH-HHHHHHHHTTSCCEEEEECSS
T ss_pred ccccCCCEEEEecCCcc-cHHHHHhhhhCCCEEEEECCC
Confidence 35789999999999876 999999999999999988754
No 250
>4f2d_A L-arabinose isomerase; structural genomics, PSI-1, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: MSE RB0; 2.30A {Escherichia coli} PDB: 2ajt_A 2hxg_A
Probab=81.88 E-value=2.8 Score=39.16 Aligned_cols=45 Identities=20% Similarity=0.198 Sum_probs=37.9
Q ss_pred cceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCC
Q psy7981 71 IDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDI 115 (216)
Q Consensus 71 i~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~i 115 (216)
+.++++..+--.|.+++.+..+++|.+++|+||+++++-|+|+..
T Consensus 44 l~~~vv~~g~v~t~~~~~~~~~~~n~~~~vdgvi~~~~TFs~a~~ 88 (500)
T 4f2d_A 44 LPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKM 88 (500)
T ss_dssp CSSEEEECCCBCSHHHHHHHHHHHHHCTTEEEEEEECCSCCCTHH
T ss_pred CCeEEEecCcCCCHHHHHHHHHHhccccCCcEEEEeCCcCccHHH
Confidence 455666666667889999999999999999999999999887744
No 251
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=81.77 E-value=0.99 Score=39.90 Aligned_cols=37 Identities=32% Similarity=0.352 Sum_probs=33.2
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.+.|++|+|+|. ..+|+.++.+|...||.|+++....
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCH
Confidence 478999999999 6889999999999999999997654
No 252
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=80.95 E-value=2.5 Score=36.80 Aligned_cols=52 Identities=17% Similarity=0.044 Sum_probs=38.1
Q ss_pred cCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 151 PCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 151 PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
||.+...+..|.+.+---.|++|+|.|.+.-||.-.+.++...||+|+.+-+
T Consensus 145 ~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~ 196 (362)
T 2c0c_A 145 LVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS 196 (362)
T ss_dssp TTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES
T ss_pred cchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC
Confidence 4434444444444322237999999999999999999999999999887754
No 253
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=80.90 E-value=2.4 Score=36.57 Aligned_cols=58 Identities=22% Similarity=0.206 Sum_probs=42.4
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 150 IPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 150 ~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
+||.....+..|.+..---.|++|+|.|.|.-||.-.+.++...||+|+.+-+....+
T Consensus 140 l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~ 197 (342)
T 4eye_A 140 LIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT 197 (342)
T ss_dssp HTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred hhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 4555555555553333234699999999999999999999999999998876644433
No 254
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=80.87 E-value=1.6 Score=35.31 Aligned_cols=38 Identities=21% Similarity=0.274 Sum_probs=28.2
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.++.+++|.||| ...+|..++..|.+.|..|+++...
T Consensus 14 ~~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 14 NLYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp ------CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTT
T ss_pred ccccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 5778999999999 5567999999999999999998643
No 255
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=80.87 E-value=14 Score=29.93 Aligned_cols=66 Identities=12% Similarity=0.133 Sum_probs=49.3
Q ss_pred CCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeC
Q psy7981 39 DFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQM 107 (216)
Q Consensus 39 ~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvql 107 (216)
...|+.+||.-+ +. +.-..+.-.+.++++||+|+.......-+.+++.+.+++..+ ..+.-||.--
T Consensus 10 ~~~P~V~IimGS-~S-D~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~-~g~~ViIa~A 75 (173)
T 4grd_A 10 HSAPLVGVLMGS-SS-DWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARE-RGLRAIIAGA 75 (173)
T ss_dssp CSSCSEEEEESS-GG-GHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTT-TTCSEEEEEE
T ss_pred CCCCeEEEEeCc-Hh-HHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHh-cCCeEEEEec
Confidence 457877766644 33 344556677899999999999999999999999999999854 4565565543
No 256
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=80.83 E-value=1.7 Score=39.39 Aligned_cols=37 Identities=19% Similarity=0.164 Sum_probs=34.0
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
+.++.||++.|||-+.+ |+++|..|...|+.|+.+..
T Consensus 140 ~~el~gktlGiIGlG~I-G~~vA~~l~~~G~~V~~~d~ 176 (404)
T 1sc6_A 140 SFEARGKKLGIIGYGHI-GTQLGILAESLGMYVYFYDI 176 (404)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECS
T ss_pred ccccCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEEcC
Confidence 56899999999999877 99999999999999999875
No 257
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=80.67 E-value=1.5 Score=37.73 Aligned_cols=34 Identities=21% Similarity=0.106 Sum_probs=31.1
Q ss_pred CeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 171 TNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 171 k~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
|+|+|.|.+..+|+-++..|+++|++|+++.+..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~ 62 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRS 62 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCC
Confidence 7899999999999999999999999999986543
No 258
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=80.48 E-value=1.9 Score=37.50 Aligned_cols=52 Identities=19% Similarity=0.117 Sum_probs=38.7
Q ss_pred ccCCHHHHHHHHHH-hCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 150 IPCTPNGVLELIKR-TNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 150 ~PcTa~av~~lL~~-~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
+||...-.+..|.+ .++ -.|++|+|.|.|.-+|.-++.++...||.|+.+-+
T Consensus 151 l~~~~~ta~~al~~~~~~-~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~ 203 (351)
T 1yb5_A 151 IGIPYFTAYRALIHSACV-KAGESVLVHGASGGVGLAACQIARAYGLKILGTAG 203 (351)
T ss_dssp THHHHHHHHHHHHTTSCC-CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred hhhHHHHHHHHHHHhhCC-CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 44444444445543 233 36999999999999999999999999999987754
No 259
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=80.37 E-value=3 Score=36.50 Aligned_cols=53 Identities=15% Similarity=0.171 Sum_probs=39.0
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 150 IPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 150 ~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+||.....+..|++.++. .|.+|+|+|.+ -||.-...++...||+|+..-+..
T Consensus 176 l~~~~~tA~~al~~~~~~-~g~~VlV~GaG-~vG~~aiqlak~~Ga~Vi~~~~~~ 228 (369)
T 1uuf_A 176 LLCAGITTYSPLRHWQAG-PGKKVGVVGIG-GLGHMGIKLAHAMGAHVVAFTTSE 228 (369)
T ss_dssp GGTHHHHHHHHHHHTTCC-TTCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSG
T ss_pred hhhhHHHHHHHHHhcCCC-CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCH
Confidence 455544455666655443 69999999986 589999999989999988766433
No 260
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=80.32 E-value=2.1 Score=38.64 Aligned_cols=39 Identities=23% Similarity=0.223 Sum_probs=33.7
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
+.|++|+|||-+ .+|...+.++...||.|+++...-..+
T Consensus 182 v~~~kV~ViG~G-~iG~~aa~~a~~lGa~V~v~D~~~~~l 220 (381)
T 3p2y_A 182 VKPASALVLGVG-VAGLQALATAKRLGAKTTGYDVRPEVA 220 (381)
T ss_dssp ECCCEEEEESCS-HHHHHHHHHHHHHTCEEEEECSSGGGH
T ss_pred cCCCEEEEECch-HHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 589999999996 679999999999999999998764433
No 261
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=80.26 E-value=1.7 Score=38.64 Aligned_cols=38 Identities=18% Similarity=0.209 Sum_probs=33.5
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCE-EEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHAT-VTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AT-Vtichs~ 203 (216)
+.++.||+|.|||-+.+ |+.++..|...|+. |+.+...
T Consensus 159 ~~~l~g~tvgIIG~G~I-G~~vA~~l~~~G~~~V~~~d~~ 197 (364)
T 2j6i_A 159 AYDIEGKTIATIGAGRI-GYRVLERLVPFNPKELLYYDYQ 197 (364)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHGGGCCSEEEEECSS
T ss_pred cccCCCCEEEEECcCHH-HHHHHHHHHhCCCcEEEEECCC
Confidence 56899999999999766 99999999999997 9888743
No 262
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=80.03 E-value=1.6 Score=37.43 Aligned_cols=53 Identities=19% Similarity=0.125 Sum_probs=39.5
Q ss_pred cCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 151 PCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 151 PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
||++...+..+....---.|++|+|+|.+.-+|.-.+.++...||+|+.+-+.
T Consensus 130 ~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~ 182 (334)
T 3qwb_A 130 LLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAST 182 (334)
T ss_dssp HHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS
T ss_pred hhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 44444445555444323479999999999999999999999999999887653
No 263
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=79.73 E-value=0.99 Score=38.26 Aligned_cols=37 Identities=11% Similarity=0.115 Sum_probs=29.9
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCC--CEEEEecCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKH--ATVTVCHSK 203 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~--ATVtichs~ 203 (216)
...+++|+|.|.+..+|+.++..|+++| .+|+.....
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~ 59 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDAL 59 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecc
Confidence 3578999999999999999999999998 677766543
No 264
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=79.65 E-value=0.71 Score=38.71 Aligned_cols=39 Identities=15% Similarity=0.278 Sum_probs=33.1
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSKTKN 206 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~T~~ 206 (216)
.|++++|+|||-+. +|.+++..|...|. .+|+++..+-+
T Consensus 28 ~l~~~~VlVvG~Gg-~G~~va~~La~~Gv~~i~lvD~d~v~ 67 (249)
T 1jw9_B 28 ALKDSRVLIVGLGG-LGCAASQYLASAGVGNLTLLDFDTVS 67 (249)
T ss_dssp HHHHCEEEEECCSH-HHHHHHHHHHHHTCSEEEEECCCBCC
T ss_pred HHhCCeEEEEeeCH-HHHHHHHHHHHcCCCeEEEEcCCCcc
Confidence 45789999999875 69999999999997 89999877633
No 265
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=79.41 E-value=1.8 Score=37.21 Aligned_cols=33 Identities=24% Similarity=0.125 Sum_probs=30.6
Q ss_pred CeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 171 TNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 171 k~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
|+|+|.|.+..+|+-++..|+++|++|+++...
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 57 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRR 57 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 689999999999999999999999999988654
No 266
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=79.24 E-value=2.1 Score=36.66 Aligned_cols=35 Identities=23% Similarity=0.175 Sum_probs=31.8
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
.|++|+|.|.|.-||.-++.++...||+|+.+.+.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~ 189 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS 189 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 69999999999999999999999999999887653
No 267
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=79.22 E-value=2.9 Score=38.11 Aligned_cols=40 Identities=18% Similarity=0.260 Sum_probs=34.3
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
.+.+.+|+|+|-+ .+|...+.++...||.|++|...-..+
T Consensus 187 ~v~~~kV~ViG~G-~iG~~aa~~a~~lGa~V~v~D~~~~~l 226 (405)
T 4dio_A 187 TVPAAKIFVMGAG-VAGLQAIATARRLGAVVSATDVRPAAK 226 (405)
T ss_dssp EECCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSTTHH
T ss_pred CcCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 3588999999996 779999999999999999998765433
No 268
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=79.03 E-value=2.2 Score=39.76 Aligned_cols=39 Identities=31% Similarity=0.389 Sum_probs=34.0
Q ss_pred hCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 164 TNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 164 ~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
.+..+.|++|+|+|-+ -||+.++..|...|+.|+++...
T Consensus 268 ~~~~l~GktV~IiG~G-~IG~~~A~~lka~Ga~Viv~d~~ 306 (494)
T 3ce6_A 268 TDALIGGKKVLICGYG-DVGKGCAEAMKGQGARVSVTEID 306 (494)
T ss_dssp HCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCCCCcCEEEEEccC-HHHHHHHHHHHHCCCEEEEEeCC
Confidence 3567899999999975 57999999999999999998764
No 269
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=78.62 E-value=1.6 Score=41.29 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=34.4
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
.++.||.|+|-|.|.=+|+-++..|.++||+|.++..
T Consensus 318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~ 354 (604)
T 2et6_A 318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDF 354 (604)
T ss_dssp CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeC
Confidence 3689999999999999999999999999999999864
No 270
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=78.50 E-value=1.8 Score=39.14 Aligned_cols=38 Identities=11% Similarity=0.030 Sum_probs=32.9
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
++.||+|+|||-+.+ |-=+|..|.+.+..||+++....
T Consensus 194 ~~~~k~VvVVG~G~s-g~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 194 EFKDKTVLLVGSSYS-AEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp GGTTSEEEEECCSTT-HHHHHHHHHHTTCSEEEEECSSC
T ss_pred HcCCCEEEEEcCCCC-HHHHHHHHHHhCCeEEEEEECCC
Confidence 357999999998764 99999999999999999987654
No 271
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=78.43 E-value=1.5 Score=37.56 Aligned_cols=53 Identities=19% Similarity=0.050 Sum_probs=40.8
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 150 IPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 150 ~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
+||.+..+...+.+..---.|++|+|.|.+.-||.-.+.++...||+|+.+-+
T Consensus 121 l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~ 173 (325)
T 3jyn_A 121 LMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS 173 (325)
T ss_dssp HHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred hhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 35666666666654432346999999999889999999999999999987754
No 272
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=78.05 E-value=1.5 Score=37.31 Aligned_cols=34 Identities=15% Similarity=-0.024 Sum_probs=31.4
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
.|++|+|.|.+.-+|.-++.++...||+|+.+.+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~ 173 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG 173 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 6999999999999999999999999999988765
No 273
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=77.97 E-value=9.8 Score=30.55 Aligned_cols=62 Identities=13% Similarity=0.152 Sum_probs=42.7
Q ss_pred ceEEEEEeCCC----cchH--HHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCC
Q psy7981 42 PGLAIVQVGGR----EDSN--VYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPL 109 (216)
Q Consensus 42 P~LaiI~vg~~----~as~--~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL 109 (216)
-++.+|....+ +.|. .-++.-.+.+++.|.+++.+.+.++..-+++.+.|.. -|+|+++.|+
T Consensus 13 ~~iLii~gsP~~~~s~~s~~~~l~~~~~~~~~~~g~~v~~~dL~~~~d~~~~~~~l~~------AD~iV~~~P~ 80 (204)
T 2amj_A 13 SNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLW------ADVVIWQMPG 80 (204)
T ss_dssp CEEEEEECCC------CHHHHHHHHHHHHHHHHTTCEEEEEESSSCCCHHHHHHHHHH------CSEEEEEEEC
T ss_pred cCEEEEEcCCCcccCcCcHHHHHHHHHHHHHHHcCCEEEEEeCCccccHHHHHHHHHh------CCEEEEECCc
Confidence 45667777767 3333 3345556667777999999999876666666666644 3699999998
No 274
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=77.77 E-value=3.3 Score=38.65 Aligned_cols=148 Identities=18% Similarity=0.152 Sum_probs=103.1
Q ss_pred CCceEEEEEeCCC--------c-chHHHHHHHHHHHHH-cCcceEEEeCCCCC-----CHHHHHHHHHHhcCCCCccEEE
Q psy7981 40 FEPGLAIVQVGGR--------E-DSNVYIRMKMKAAKE-IGIDAQHVKLPRSI-----TEIELLSRLKKLNEDPSVHGII 104 (216)
Q Consensus 40 ~~P~LaiI~vg~~--------~-as~~Yv~~k~k~a~~-~Gi~~~~~~l~~~~-----~~~el~~~I~~lN~D~~V~GIl 104 (216)
+.+.++||.=|+. + ++.--...|.-.... .||++..+.++... ..+++.+.++.+- |+.-||
T Consensus 89 kgn~VaVVTDG~aILGLGDiG~~agmpImeGKl~Lyk~~aGId~lPI~LD~gt~~~~~d~defve~v~~~~--P~fG~I- 165 (487)
T 3nv9_A 89 RGNFVGVVSDSTRVLGDGDVTPPGGLGVMEGKALLMKYLGGIDAVPICIDSKNKEGKNDPDAVIEFVQRIQ--HTFGAI- 165 (487)
T ss_dssp GGGEEEEEECSSSBGGGBCCCGGGGHHHHHHHHHHHHHHHCCEEEEEECCCBCTTSCBCHHHHHHHHHHHG--GGCSEE-
T ss_pred cCCEEEEEEcCceeeeccccccccCCchhhhHHHHHHhcCCCceeeeEEeCCCccccCCHHHHHHHHHHhC--CCCCee-
Confidence 4467888887765 2 344444555555544 58999999988652 5799999999884 555553
Q ss_pred EeCCCCCCCCCCHHHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccH
Q psy7981 105 VQMPLDSDNDINAMLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGT 184 (216)
Q Consensus 105 vqlPL~~P~~id~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~ 184 (216)
|+==| +.-+-.++++...-+=|+..||. +.++-.-+|..|++.-|+-.|.+++..++|+.|.+.- |-
T Consensus 166 -nlEDf--~ap~af~il~ryr~~~~ipvFnD---------D~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaA-Gi 232 (487)
T 3nv9_A 166 -NLEDI--SQPNCYKILDVLRESCDIPVWHD---------DQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSS-NT 232 (487)
T ss_dssp -EECSC--CTTHHHHHHHHHHHHCSSCEEET---------TTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHH-HH
T ss_pred -cHhhc--CCchHHHHHHHHHhhccCCcccc---------ccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HH
Confidence 32111 12223445444443336666664 3125556788999999999999999999999999765 99
Q ss_pred HHHHHhhhCCC---EEEEecCC
Q psy7981 185 PAAELLKWKHA---TVTVCHSK 203 (216)
Q Consensus 185 Pla~lL~~~~A---TVtichs~ 203 (216)
-++.||...|. .+++|.|+
T Consensus 233 gia~ll~~~G~~~~~i~l~D~~ 254 (487)
T 3nv9_A 233 TCLRLIVTAGADPKKIVMFDSK 254 (487)
T ss_dssp HHHHHHHHTTCCGGGEEEEETT
T ss_pred HHHHHHHHcCCCcccEEEEecc
Confidence 99999999998 69999886
No 275
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=77.73 E-value=2 Score=35.00 Aligned_cols=40 Identities=13% Similarity=-0.030 Sum_probs=33.2
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
..+.|++|+|||-+. .|..++..|.+.+ .||+.+.....+
T Consensus 137 ~~~~~~~v~vvG~G~-~~~e~a~~l~~~g-~v~~v~~~~~~~ 176 (297)
T 3fbs_A 137 YELDQGKIGVIAASP-MAIHHALMLPDWG-ETTFFTNGIVEP 176 (297)
T ss_dssp GGGTTCEEEEECCST-THHHHHHHGGGTS-EEEEECTTTCCC
T ss_pred hhhcCCEEEEEecCc-cHHHHHHHhhhcC-cEEEEECCCCCC
Confidence 456799999999765 5999999999998 999998766543
No 276
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=77.59 E-value=1.8 Score=40.43 Aligned_cols=38 Identities=24% Similarity=0.224 Sum_probs=33.7
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.++.||++.|||-+.+ |+++|..|...|+.|+.+...
T Consensus 137 ~~~l~g~~vgIIG~G~I-G~~vA~~l~~~G~~V~~~d~~ 174 (529)
T 1ygy_A 137 GTEIFGKTVGVVGLGRI-GQLVAQRIAAFGAYVVAYDPY 174 (529)
T ss_dssp BCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTT
T ss_pred ccccCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEECCC
Confidence 46899999999998765 999999999999999998754
No 277
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=77.23 E-value=2.3 Score=36.80 Aligned_cols=52 Identities=21% Similarity=0.186 Sum_probs=38.1
Q ss_pred cCCHHHHHHHH-HHhCCCCCC--CeEEEecCCCcccHHHHHHhhhCCC-EEEEecCC
Q psy7981 151 PCTPNGVLELI-KRTNVTIAG--TNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSK 203 (216)
Q Consensus 151 PcTa~av~~lL-~~~~i~l~G--k~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~ 203 (216)
||+....+..| +..++. .| ++|+|.|.|.-+|.-++.++...|| .|+.+-+.
T Consensus 140 ~~~~~ta~~al~~~~~~~-~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~ 195 (357)
T 2zb4_A 140 GMPGLTSLIGIQEKGHIT-AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGT 195 (357)
T ss_dssp SHHHHHHHHHHHHHSCCC-TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred ccHHHHHHHHHHHhcCCC-CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 43333344444 333433 68 9999999999999999999999999 98887653
No 278
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=77.02 E-value=3.9 Score=35.44 Aligned_cols=57 Identities=16% Similarity=0.155 Sum_probs=42.1
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
.+||.....+..|++.++. .|.+|+|+|. .-||.-...++...||.|+..-+....+
T Consensus 160 ~l~~~~~ta~~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~ 216 (360)
T 1piw_A 160 PLLCGGLTVYSPLVRNGCG-PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKR 216 (360)
T ss_dssp GGGTHHHHHHHHHHHTTCS-TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTH
T ss_pred hhhhhHHHHHHHHHHcCCC-CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 4566555556666664443 6999999999 7789999999988999988776544433
No 279
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=76.75 E-value=17 Score=31.97 Aligned_cols=141 Identities=11% Similarity=0.001 Sum_probs=88.6
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCC--------------CHHHHHHHHHHhcCCCCccEEEEeCC
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSI--------------TEIELLSRLKKLNEDPSVHGIIVQMP 108 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~--------------~~~el~~~I~~lN~D~~V~GIlvqlP 108 (216)
.++.+... .|-.---+=..++.++|.++....-.... .-|-+.+.++-|+.= +|+|.+-.|
T Consensus 38 ~l~~lF~e---pSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~~e~~~g~~m~~~kgEsl~DTarvLs~y--~D~IviR~~ 112 (324)
T 1js1_X 38 TLLMIFFN---SSLRTRLSTQKAALNLGMNVIVLDINQGAWKLETERGVIMDGDKPEHLLEAIPVMGCY--CDIIGVRSF 112 (324)
T ss_dssp EEEEEESS---CCSHHHHHHHHHHHHTTCEEEEEECCGGGCCEECCSSCCCCSSCCEEHHHHHHHHHHT--CSEEEEECC
T ss_pred EEEEEecC---CCcchHHHHHHHHHHcCCEEEEECCCCCceeeccccccccccCCCCCHHHHHHHHHHh--CcEEEEecc
Confidence 45666554 33333334478999999998877633211 112355555555443 678888876
Q ss_pred CCCCCCC---------CHHHHhhhcCCCCCcccCCccchhHhhcCCCCCcccCCHHH-HHHHHHHhCC-CCCCCeEEE--
Q psy7981 109 LDSDNDI---------NAMLVTDSVSPEKDVDGLNTINEGRVAIGDMNGFIPCTPNG-VLELIKRTNV-TIAGTNAVV-- 175 (216)
Q Consensus 109 L~~P~~i---------d~~~i~~~I~p~KDVDG~~~~n~G~l~~~~~~~~~PcTa~a-v~~lL~~~~i-~l~Gk~vvV-- 175 (216)
|.-. ..+.+.+.. ++-.+|.|- ....||=+++ ++.+.++.|- +++ .+|++
T Consensus 113 ---~~~~~~~~~~~~~~~~~lA~~~-------~vPVINa~~------~~~HPtQaLaDl~Ti~e~~g~~~l~-l~ia~a~ 175 (324)
T 1js1_X 113 ---ARFENREYDYNEVIINQFIQHS-------GRPVFSMEA------ATRHPLQSFADLITIEEYKKTARPK-VVMTWAP 175 (324)
T ss_dssp ---CCSSCHHHHHHTHHHHHHHHHS-------SSCEEESSC------SSCCHHHHHHHHHHHHHHCSSSSCE-EEEECCC
T ss_pred ---cccccccccccchHHHHHHhhC-------CCCEEECCC------CCCCcHHHHHHHHHHHHHcCCCCee-EEEEEEc
Confidence 3222 222232222 234466321 3678998888 5555565553 567 89999
Q ss_pred ---ecCCCcccHHHHHHhhhCCCEEEEecCCCCC
Q psy7981 176 ---LGRSKIVGTPAAELLKWKHATVTVCHSKTKN 206 (216)
Q Consensus 176 ---iGrS~~VG~Pla~lL~~~~ATVtichs~T~~ 206 (216)
||- +.|.+.+..+|..-|+.|++|+=.+-.
T Consensus 176 ~~~vGD-~rva~Sl~~~~~~~G~~v~~~~P~~~~ 208 (324)
T 1js1_X 176 HPRPLP-QAVPNSFAEWMNATDYEFVITHPEGYE 208 (324)
T ss_dssp CSSCCC-SHHHHHHHHHHHTSSSEEEEECCTTCC
T ss_pred ccccCC-cchHHHHHHHHHHCCCEEEEeCCcccC
Confidence 999 788999999999999999999865543
No 280
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=76.60 E-value=2.9 Score=35.92 Aligned_cols=53 Identities=21% Similarity=0.224 Sum_probs=38.7
Q ss_pred ccCCHHHHHHHHHHh-CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 150 IPCTPNGVLELIKRT-NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 150 ~PcTa~av~~lL~~~-~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+||...-.+..|.+. ++ -.|++|+|+|.|.-+|.-++.++...||+|+.+.+.
T Consensus 147 l~~~~~ta~~al~~~~~~-~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~ 200 (343)
T 2eih_A 147 IPLTFLTAWQMVVDKLGV-RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGS 200 (343)
T ss_dssp SHHHHHHHHHHHTTTSCC-CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESS
T ss_pred chhhHHHHHHHHHHhcCC-CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 344333344445443 33 369999999999999999999999999999887553
No 281
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=76.45 E-value=26 Score=28.19 Aligned_cols=65 Identities=17% Similarity=0.035 Sum_probs=43.2
Q ss_pred CCCceEEEEEeC------CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 39 DFEPGLAIVQVG------GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 39 ~~~P~LaiI~vg------~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
+....+++|.-. +++--..+++...+.|++.|..+.... .+.+.+...+.++.+.. ..|+||++.
T Consensus 6 ~~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~--~~~~~~~~~~~~~~~~~-~~vdgiIi~ 76 (292)
T 3k4h_A 6 QTTKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGYALYMST--GETEEEIFNGVVKMVQG-RQIGGIILL 76 (292)
T ss_dssp -CCCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTCEEEECC--CCSHHHHHHHHHHHHHT-TCCCEEEES
T ss_pred CCCCEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCCEEEEEe--CCCCHHHHHHHHHHHHc-CCCCEEEEe
Confidence 455667777655 345555667888899999998877643 33344444556666644 579999985
No 282
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=76.44 E-value=8.3 Score=32.50 Aligned_cols=64 Identities=13% Similarity=0.172 Sum_probs=46.4
Q ss_pred CceEEEEEeCCC--cchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCC-CCccEEEEe
Q psy7981 41 EPGLAIVQVGGR--EDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNED-PSVHGIIVQ 106 (216)
Q Consensus 41 ~P~LaiI~vg~~--~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D-~~V~GIlvq 106 (216)
++++++|.-+.. +--..+.+...++|++.|+++..... +.+.+.-.+.|+.+-.. ..|+||++.
T Consensus 3 ~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~--~~~~~~~~~~i~~~i~~~~~vDgiIi~ 69 (350)
T 3h75_A 3 LTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYA--ERDPQNTLQQARELFQGRDKPDYLMLV 69 (350)
T ss_dssp CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEEC--TTCHHHHHHHHHHHHHSSSCCSEEEEE
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHHHHHcCCeEEEEEC--CCCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 467777776532 44456678888999999999888754 33556666777777666 789999995
No 283
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=76.18 E-value=12 Score=30.40 Aligned_cols=68 Identities=7% Similarity=-0.062 Sum_probs=45.1
Q ss_pred CCceEEEEEeCC-CcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCC
Q psy7981 40 FEPGLAIVQVGG-REDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMP 108 (216)
Q Consensus 40 ~~P~LaiI~vg~-~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlP 108 (216)
...++++|.-.- ++--...++...++|++.|+++.........+.++-.+.++.+-. ..|+||++.-+
T Consensus 4 ~~~~Igvi~~~~~~~~~~~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vdgiii~~~ 72 (304)
T 3o1i_D 4 SDEKICAIYPHLKDSYWLSVNYGMVSEAEKQGVNLRVLEAGGYPNKSRQEQQLALCTQ-WGANAIILGTV 72 (304)
T ss_dssp -CCEEEEEESCSCSHHHHHHHHHHHHHHHHHTCEEEEEECSSTTCHHHHHHHHHHHHH-HTCSEEEECCS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCeEEEEcCCCCCCHHHHHHHHHHHHH-cCCCEEEEeCC
Confidence 445666666432 333445567888999999999988877653355555566666544 46999999733
No 284
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=76.15 E-value=2.4 Score=37.61 Aligned_cols=37 Identities=30% Similarity=0.302 Sum_probs=32.8
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
++.|++|+|+|- ..+|+.++.++...|+.|+++....
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 578999999998 5679999999999999999987643
No 285
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=76.11 E-value=3.3 Score=37.42 Aligned_cols=38 Identities=8% Similarity=0.064 Sum_probs=34.0
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.++.||++.|||-+.+ |+.++..|...|+.|+.+...
T Consensus 186 ~~~l~gktvGIIGlG~I-G~~vA~~l~a~G~~V~~~d~~ 223 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRI-GLAVLRRLAPFDVHLHYTDRH 223 (393)
T ss_dssp CCCCTTCEEEEECCSHH-HHHHHHHHGGGTCEEEEECSS
T ss_pred CccCCCCEEEEEeECHH-HHHHHHHHHhCCCEEEEEcCC
Confidence 46799999999999986 999999999999999988654
No 286
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=76.05 E-value=2.3 Score=38.25 Aligned_cols=40 Identities=15% Similarity=0.208 Sum_probs=33.9
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
.+.|++|+|+|-+ .+|...+.++...||.|+++......+
T Consensus 169 ~l~g~~V~ViGaG-~iG~~aa~~a~~~Ga~V~v~D~~~~~~ 208 (401)
T 1x13_A 169 KVPPAKVMVIGAG-VAGLAAIGAANSLGAIVRAFDTRPEVK 208 (401)
T ss_dssp EECCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCGGGH
T ss_pred CcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 3679999999975 579999999999999999998765443
No 287
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=76.02 E-value=9.6 Score=30.94 Aligned_cols=67 Identities=7% Similarity=-0.049 Sum_probs=42.7
Q ss_pred CCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCC
Q psy7981 39 DFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMP 108 (216)
Q Consensus 39 ~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlP 108 (216)
+....++++.-..++--..+++...++|++.|+++...... .+.++..+.++.+. ...|+||++.-+
T Consensus 6 ~~~~~Igvi~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~l~-~~~vdgiI~~~~ 72 (288)
T 2qu7_A 6 GRSNIIAFIVPDQNPFFTEVLTEISHECQKHHLHVAVASSE--ENEDKQQDLIETFV-SQNVSAIILVPV 72 (288)
T ss_dssp -CEEEEEEEESSCCHHHHHHHHHHHHHHGGGTCEEEEEECT--TCHHHHHHHHHHHH-HTTEEEEEECCS
T ss_pred CCCCEEEEEECCCCchHHHHHHHHHHHHHHCCCEEEEEeCC--CCHHHHHHHHHHHH-HcCccEEEEecC
Confidence 34556777665433333445677788899999988776433 34455556666665 346999998643
No 288
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=75.97 E-value=3.9 Score=35.39 Aligned_cols=52 Identities=8% Similarity=0.048 Sum_probs=38.6
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEe
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVC 200 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtic 200 (216)
.+||.+..++..|.+..---.|.+|+|+|.+.-||.-...++...||.|.+.
T Consensus 147 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~ 198 (357)
T 1zsy_A 147 TLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINV 198 (357)
T ss_dssp HTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred hhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEE
Confidence 4566665556566554322379999999999999999999888889986544
No 289
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=75.89 E-value=2.8 Score=36.57 Aligned_cols=53 Identities=26% Similarity=0.308 Sum_probs=38.3
Q ss_pred cccCCHHHHHHHHHH-hCC---CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEec
Q psy7981 149 FIPCTPNGVLELIKR-TNV---TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCH 201 (216)
Q Consensus 149 ~~PcTa~av~~lL~~-~~i---~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtich 201 (216)
.+||.....+..|.+ .++ .-.|++|+|.|.+.-||.-...++...||+|+.+-
T Consensus 159 ~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~ 215 (375)
T 2vn8_A 159 SLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC 215 (375)
T ss_dssp TSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe
Confidence 445544444444532 331 34799999999989999999999999999987664
No 290
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=75.80 E-value=6.2 Score=35.82 Aligned_cols=54 Identities=13% Similarity=0.033 Sum_probs=41.0
Q ss_pred cCCHHHHHHHHH----Hh---CCCCCCCeEEEecCCCcccHH--HHHHhhhCCCEEEEecCCC
Q psy7981 151 PCTPNGVLELIK----RT---NVTIAGTNAVVLGRSKIVGTP--AAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 151 PcTa~av~~lL~----~~---~i~l~Gk~vvViGrS~~VG~P--la~lL~~~~ATVtichs~T 204 (216)
++.|.+|-+-+. +. +-...||.|+|.|.|.=+|+- ++..|.++||+|.++....
T Consensus 34 ~~~p~g~~~~v~~qi~y~~~~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~ 96 (418)
T 4eue_A 34 DVHPYGCRREVLNQIDYCKKAIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYET 96 (418)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCC
T ss_pred cCCCccHHHHHHHHHHHHhccCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCc
Confidence 455666554443 21 222789999999999999999 9999999999998887643
No 291
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=75.75 E-value=2.5 Score=36.28 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=30.3
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
...++|.|||-+. +|.+++..|.+.|..|+++...
T Consensus 29 ~~~~~I~iIG~G~-mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGS-MGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTT-THHHHHHHHHHTTCEEEEECSC
T ss_pred cCCCEEEEECccH-HHHHHHHHHHhCCCeEEEEcCC
Confidence 3568999999866 5999999999999999999754
No 292
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=75.19 E-value=2 Score=38.22 Aligned_cols=37 Identities=11% Similarity=0.061 Sum_probs=32.3
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCE-EEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHAT-VTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~AT-Vtichs~T 204 (216)
.+.||+|+|||-+.+ |.-+|..|.+.+.. ||+++...
T Consensus 209 ~~~~k~VvVvG~G~s-g~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 209 LFVGESVLVVGGASS-ANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp GGTTCCEEEECSSHH-HHHHHHHHTTTSCSSEEEECTTC
T ss_pred hcCCCEEEEEccCcC-HHHHHHHHHHHhCCcEEEEeCCC
Confidence 358999999998865 99999999999999 99998753
No 293
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=75.15 E-value=1.8 Score=37.43 Aligned_cols=56 Identities=11% Similarity=0.056 Sum_probs=40.7
Q ss_pred cccCCHHHHHHHHHHhCCCCCC-CeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCC
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAG-TNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKN 206 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~G-k~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~ 206 (216)
.+||.+..++.+++..+ ..| +.|+|.|-+.-||.-...++...||+|+.+.+....
T Consensus 145 ~l~~~~~ta~~~~~~~~--~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~ 201 (349)
T 3pi7_A 145 AMIVNPLTAIAMFDIVK--QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQ 201 (349)
T ss_dssp GSSHHHHHHHHHHHHHH--HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGG
T ss_pred hccccHHHHHHHHHHHh--hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 34555555556666655 445 788888889999999999999999999887654333
No 294
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=74.97 E-value=4.3 Score=36.77 Aligned_cols=38 Identities=24% Similarity=0.327 Sum_probs=31.4
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhh--------------------hCCC-EEEEecCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLK--------------------WKHA-TVTVCHSKTK 205 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~--------------------~~~A-TVtichs~T~ 205 (216)
++.|++|+|||-++ +|.-+|..|. +.++ .||+++...+
T Consensus 142 ~~~~~~vvVIGgG~-~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 142 DLSCDTAVILGQGN-VALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp CTTSSEEEEESCSH-HHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCCCCEEEEECCCH-HHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 45799999999765 6999999998 5677 7999987653
No 295
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=74.82 E-value=2.7 Score=36.24 Aligned_cols=55 Identities=18% Similarity=0.196 Sum_probs=40.3
Q ss_pred cccCCHHHHHHHH-HHhCCCC-----CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 149 FIPCTPNGVLELI-KRTNVTI-----AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 149 ~~PcTa~av~~lL-~~~~i~l-----~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
.+||+....+..| +..++.. .|.+|+|+|-+.-||.-...++...||+|+.+-+.
T Consensus 124 ~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~ 184 (346)
T 3fbg_A 124 SLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASR 184 (346)
T ss_dssp TSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCS
T ss_pred hcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 3455444444444 3444443 79999999888899999999999999999988653
No 296
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=74.81 E-value=9.7 Score=32.29 Aligned_cols=88 Identities=9% Similarity=0.079 Sum_probs=38.4
Q ss_pred hhcccHH-HHHHHHHHHHHHHHHHHhcCCCCCc-------------eEEEEEeCC-CcchHHHHHHHHHHHHHcCcceEE
Q psy7981 11 QILSGTA-VSGDIREGLKERVKKLKERLPDFEP-------------GLAIVQVGG-REDSNVYIRMKMKAAKEIGIDAQH 75 (216)
Q Consensus 11 ~il~Gk~-vA~~i~~~ik~~v~~l~~~~~~~~P-------------~LaiI~vg~-~~as~~Yv~~k~k~a~~~Gi~~~~ 75 (216)
++|+|++ |+++-++.+.+.++++ |+.| .+++|.-.- ++--..+++...+.|++.|..+..
T Consensus 31 r~Ln~~~~vs~~tr~rV~~~a~~l-----gY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~ 105 (355)
T 3e3m_A 31 RALKKDSPISSETRERILKVVKDM-----NYVPDQVAGSLTTKRSGFVGLLLPSLNNLHFAQTAQSLTDVLEQGGLQLLL 105 (355)
T ss_dssp ---------------------------------------------CEEEEEESCSBCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHh-----CCCcCHHHHhhhcCCCCEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEE
Confidence 5687763 4444444444444433 3333 355544321 233344567888999999999887
Q ss_pred EeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 76 VKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 76 ~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
..... +.+...+.++.+.. ..|+||++.
T Consensus 106 ~~~~~--~~~~~~~~~~~l~~-~~vdGiI~~ 133 (355)
T 3e3m_A 106 GYTAY--SPEREEQLVETMLR-RRPEAMVLS 133 (355)
T ss_dssp EECTT--CHHHHHHHHHHHHH-TCCSEEEEE
T ss_pred EeCCC--ChHHHHHHHHHHHh-CCCCEEEEe
Confidence 75443 34444555555543 479999996
No 297
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=74.79 E-value=3.8 Score=35.59 Aligned_cols=53 Identities=25% Similarity=0.203 Sum_probs=39.4
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
.+||+....+..|.+..---.|.+|+|+| +.-||.-...++...||.|+..-+
T Consensus 169 ~l~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~ 221 (363)
T 3uog_A 169 TLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSS 221 (363)
T ss_dssp TTTTHHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEES
T ss_pred hcccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEec
Confidence 46666655566553332223799999999 778999999999999999988654
No 298
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=74.61 E-value=2.6 Score=36.30 Aligned_cols=51 Identities=14% Similarity=0.080 Sum_probs=39.9
Q ss_pred cccCCHHHHHHHHHHh-----CCCCCCCeEEEecCCCcccHHHHHHhhhC--CCEEEEecC
Q psy7981 149 FIPCTPNGVLELIKRT-----NVTIAGTNAVVLGRSKIVGTPAAELLKWK--HATVTVCHS 202 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~-----~i~l~Gk~vvViGrS~~VG~Pla~lL~~~--~ATVtichs 202 (216)
.+||.....+..|+.. ++ .|.+|+|+|. .-||.-...++... ||.|+..-+
T Consensus 147 ~l~~~~~ta~~al~~~~~~~~~~--~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~ 204 (344)
T 2h6e_A 147 PLADAGTTSMGAIRQALPFISKF--AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISR 204 (344)
T ss_dssp GGGTHHHHHHHHHHHHHHHHTTC--SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred hhhhhhHHHHHHHHhhhhcccCC--CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeC
Confidence 3566555556666666 66 8999999999 58899999988888 999887754
No 299
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=74.58 E-value=2.6 Score=36.49 Aligned_cols=34 Identities=26% Similarity=0.233 Sum_probs=31.2
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
.|++|+|.|.+.-+|.-++.++...||.|+.+..
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~ 195 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG 195 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC
Confidence 6999999999999999999999999999988764
No 300
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=74.50 E-value=8.1 Score=33.14 Aligned_cols=58 Identities=22% Similarity=0.167 Sum_probs=43.1
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
.+||.....+..|++.++ -.|.+|+|+|. .-||.-...++...||+|+..-+....++
T Consensus 157 ~l~~~~~ta~~~l~~~~~-~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~ 214 (348)
T 3two_A 157 PLLCAGITTYSPLKFSKV-TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQ 214 (348)
T ss_dssp GGGTHHHHHHHHHHHTTC-CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHH
T ss_pred hhhhhHHHHHHHHHhcCC-CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 466766666666666543 36999999997 57899999999999999998765444443
No 301
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=74.32 E-value=2.4 Score=38.66 Aligned_cols=39 Identities=28% Similarity=0.382 Sum_probs=34.9
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
..++.||.++|.|-+.-+|+-++..|.++||+|.++...
T Consensus 208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~ 246 (454)
T 3u0b_A 208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVD 246 (454)
T ss_dssp TSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECG
T ss_pred ccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 345789999999999999999999999999999988653
No 302
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=74.11 E-value=2.7 Score=35.59 Aligned_cols=37 Identities=24% Similarity=0.255 Sum_probs=30.7
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.+.||+|+|||-+. .|--+|..|.+.+..||+++...
T Consensus 163 ~~~~~~vvVvG~G~-~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 163 NFNKGQYVVIGGNE-SGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp GSCSSEEEEECCSH-HHHHHHHHHHHTTCEEEEECC--
T ss_pred hcCCCEEEEECCCc-CHHHHHHHHHhcCCeEEEEecCC
Confidence 35799999999764 59999999999999999998754
No 303
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=74.05 E-value=4 Score=34.57 Aligned_cols=38 Identities=18% Similarity=0.178 Sum_probs=31.0
Q ss_pred CeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChHH
Q psy7981 171 TNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQD 209 (216)
Q Consensus 171 k~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~~ 209 (216)
++|.|||-+ .+|.+++..|.+.|..|+++.......+.
T Consensus 16 ~~I~vIG~G-~mG~~~A~~l~~~G~~V~~~dr~~~~~~~ 53 (296)
T 3qha_A 16 LKLGYIGLG-NMGAPMATRMTEWPGGVTVYDIRIEAMTP 53 (296)
T ss_dssp CCEEEECCS-TTHHHHHHHHTTSTTCEEEECSSTTTSHH
T ss_pred CeEEEECcC-HHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 689999965 56999999999999999999765444443
No 304
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=73.99 E-value=15 Score=30.11 Aligned_cols=64 Identities=8% Similarity=0.013 Sum_probs=47.7
Q ss_pred ceEEEEEeCCCcchHHHHHHHHHHHHHcCc---ceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 42 PGLAIVQVGGREDSNVYIRMKMKAAKEIGI---DAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 42 P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi---~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
..+++|.--++|--...++...+.|++.|. ++.......+-+.+.....+++|- +..||||++.
T Consensus 3 ~~Igvi~~~~~p~~~~i~~gi~~~l~~~gy~g~~v~l~~~~~~~~~~~~~~~~~~l~-~~~vDgII~~ 69 (295)
T 3lft_A 3 AKIGVLQFVSHPSLDLIYKGIQDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLV-ANGNDLVVGI 69 (295)
T ss_dssp EEEEEEECSCCHHHHHHHHHHHHHHHHTTCCGGGEEEEEEECTTCHHHHHHHHHHHT-TSSCSEEEEE
T ss_pred eEEEEEEccCChhHHHHHHHHHHHHHHcCCCCCceEEEEecCCCCHHHHHHHHHHHH-hcCCCEEEEC
Confidence 456777545566666677889999999999 766655555566777778888884 5689999985
No 305
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=73.99 E-value=15 Score=29.78 Aligned_cols=69 Identities=7% Similarity=-0.061 Sum_probs=47.5
Q ss_pred CCCceEEEEEeC--CCcchHHHHHHHHHHHHHc-CcceEEEeC-CCCCCHHHHHHHHHHhcCCCCccEEEEeCC
Q psy7981 39 DFEPGLAIVQVG--GREDSNVYIRMKMKAAKEI-GIDAQHVKL-PRSITEIELLSRLKKLNEDPSVHGIIVQMP 108 (216)
Q Consensus 39 ~~~P~LaiI~vg--~~~as~~Yv~~k~k~a~~~-Gi~~~~~~l-~~~~~~~el~~~I~~lN~D~~V~GIlvqlP 108 (216)
+....+++|.-. +++--...++...++|++. |..+..... ....+.++..+.++.+.. ..|+||++.-+
T Consensus 6 ~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~-~~vdgiii~~~ 78 (304)
T 3gbv_A 6 NKKYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIE-EQPDGVMFAPT 78 (304)
T ss_dssp -CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHT-TCCSEEEECCS
T ss_pred CCcceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHh-cCCCEEEECCC
Confidence 345667777665 3555556678888999998 888877654 234466677777777754 57999999733
No 306
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=73.98 E-value=14 Score=29.81 Aligned_cols=63 Identities=10% Similarity=0.077 Sum_probs=45.8
Q ss_pred CCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEE
Q psy7981 40 FEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIV 105 (216)
Q Consensus 40 ~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlv 105 (216)
.+|..+||.-+ ..+.-+.+.-.+.++++||+|+.......-+.+++.+..+++.++ .+.-||.
T Consensus 10 ~~~~V~IimGS--~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~-g~~ViIa 72 (170)
T 1xmp_A 10 MKSLVGVIMGS--TSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARER-GLKVIIA 72 (170)
T ss_dssp -CCSEEEEESS--GGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTT-TCCEEEE
T ss_pred CCCcEEEEECc--HHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhC-CCcEEEE
Confidence 46876665544 344555666788899999999999999999999999999887643 2334444
No 307
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=73.80 E-value=4.5 Score=37.02 Aligned_cols=39 Identities=13% Similarity=0.022 Sum_probs=34.4
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhh-CCCEEEEecCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKW-KHATVTVCHSKTK 205 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~-~~ATVtichs~T~ 205 (216)
.-.||.|+|.|.|.=+|+-++..|.. +||.|.++.....
T Consensus 58 ~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~ 97 (422)
T 3s8m_A 58 NDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKP 97 (422)
T ss_dssp SSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCC
T ss_pred ccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCch
Confidence 34699999999999999999999999 9999999876543
No 308
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=73.79 E-value=2.3 Score=35.64 Aligned_cols=39 Identities=21% Similarity=0.355 Sum_probs=32.4
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSKTKN 206 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~T~~ 206 (216)
.|++++|+|||-+. +|.+++..|...|. ++|+++..+-+
T Consensus 25 ~l~~~~VlvvG~Gg-lG~~va~~La~~Gvg~i~lvD~d~v~ 64 (251)
T 1zud_1 25 KLLDSQVLIIGLGG-LGTPAALYLAGAGVGTLVLADDDDVH 64 (251)
T ss_dssp HHHTCEEEEECCST-THHHHHHHHHHTTCSEEEEECCCBCC
T ss_pred HHhcCcEEEEccCH-HHHHHHHHHHHcCCCeEEEEeCCCcc
Confidence 35789999999988 69999999999986 78998665543
No 309
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=73.79 E-value=1.8 Score=38.23 Aligned_cols=39 Identities=13% Similarity=0.080 Sum_probs=34.1
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
...+++|+|.|.+..+|+-++..|.++|++|+++-+...
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 104 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN 104 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence 456889999999999999999999999999998865544
No 310
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=73.62 E-value=4.4 Score=43.70 Aligned_cols=44 Identities=23% Similarity=0.188 Sum_probs=37.9
Q ss_pred HHHhCCCCCCCeEEEecCCCc-ccHHHHHHhhhCCCEEEEecCCC
Q psy7981 161 IKRTNVTIAGTNAVVLGRSKI-VGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 161 L~~~~i~l~Gk~vvViGrS~~-VG~Pla~lL~~~~ATVtichs~T 204 (216)
....+.++.||.|+|.|-|.= +|+-++..|..+||+|.++..+.
T Consensus 666 ~~~~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~ 710 (1887)
T 2uv8_A 666 AAFNGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRF 710 (1887)
T ss_dssp HHHTCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cccccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 344577899999999999997 99999999999999999984443
No 311
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=73.54 E-value=16 Score=29.32 Aligned_cols=63 Identities=11% Similarity=0.164 Sum_probs=47.0
Q ss_pred CceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 41 EPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 41 ~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
+|+.+|| .|.+ ++.-+.+.-.+.++++|+.|+.......-+.+++.+.++++.++ .+.-||.-
T Consensus 5 ~p~V~Ii-mgS~-SD~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~-g~~ViIa~ 67 (166)
T 3oow_A 5 SVQVGVI-MGSK-SDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKER-GLKVIIAG 67 (166)
T ss_dssp CEEEEEE-ESSG-GGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTT-TCCEEEEE
T ss_pred CCeEEEE-ECcH-HhHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhC-CCcEEEEE
Confidence 3655554 5533 44556677788999999999999999999999999999998654 34555543
No 312
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=73.22 E-value=32 Score=27.98 Aligned_cols=66 Identities=12% Similarity=0.031 Sum_probs=44.9
Q ss_pred CCCceEEEEEeC-----CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCC
Q psy7981 39 DFEPGLAIVQVG-----GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMP 108 (216)
Q Consensus 39 ~~~P~LaiI~vg-----~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlP 108 (216)
+....+++|.-. .++--..+++...+.|++.|..+......+...+.++++.+.. ..|+|||+.-+
T Consensus 4 ~~s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~vdGiIi~~~ 74 (294)
T 3qk7_A 4 GRTDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLLLIPDEPGEKYQSLIHLVET----RRVDALIVAHT 74 (294)
T ss_dssp -CCCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCCHHHHHHHHH----TCCSEEEECSC
T ss_pred CccceEEEEecCCCccccChhHHHHHHHHHHHHHHCCCEEEEEeCCChhhHHHHHHHHHc----CCCCEEEEeCC
Confidence 345667777752 3344455678888999999999988877654455566666554 36889999644
No 313
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=73.21 E-value=4.3 Score=37.26 Aligned_cols=37 Identities=14% Similarity=0.054 Sum_probs=31.0
Q ss_pred CCCCeEEEecCCCcccHH-HHHHhhhCCCEEEEecCCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTP-AAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~P-la~lL~~~~ATVtichs~T~ 205 (216)
-..|+|.|||-+.. |.. +|.+|.++|+.|+++..+..
T Consensus 20 ~~~~~v~viGiG~s-G~s~~A~~l~~~G~~V~~~D~~~~ 57 (494)
T 4hv4_A 20 RRVRHIHFVGIGGA-GMGGIAEVLANEGYQISGSDLAPN 57 (494)
T ss_dssp --CCEEEEETTTST-THHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccCCEEEEEEEcHh-hHHHHHHHHHhCCCeEEEEECCCC
Confidence 35799999998876 985 99999999999999997654
No 314
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=73.01 E-value=2.5 Score=37.14 Aligned_cols=36 Identities=28% Similarity=0.343 Sum_probs=32.2
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+.+++|+|+|. .-+|+..+.++...||.|+++.+..
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 67899999999 6789999999999999999997643
No 315
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=72.98 E-value=3.7 Score=34.77 Aligned_cols=53 Identities=23% Similarity=0.216 Sum_probs=39.7
Q ss_pred CCHHHHHHHHHHhCCCCC-CCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 152 CTPNGVLELIKRTNVTIA-GTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 152 cTa~av~~lL~~~~i~l~-Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
+|+...+.-+.+.++... |+ |+|.|.+.-||.-...++...||+|+.+-+...
T Consensus 129 ~ta~~al~~~~~~~~~~~~g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~ 182 (324)
T 3nx4_A 129 FTAMLCVMALEDAGIRPQDGE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRES 182 (324)
T ss_dssp HHHHHHHHHHHHTTCCGGGCC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred HHHHHHHHHhhhcccCCCCCe-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 355555555566655442 56 999999999999999999999999998765433
No 316
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=72.60 E-value=6 Score=36.02 Aligned_cols=40 Identities=15% Similarity=0.065 Sum_probs=35.2
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhh-CCCEEEEecCCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKW-KHATVTVCHSKTK 205 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~-~~ATVtichs~T~ 205 (216)
+.-.||.|+|.|.|.=+|+-++..|.. +||.|.+++....
T Consensus 43 ~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~ 83 (405)
T 3zu3_A 43 IANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERP 83 (405)
T ss_dssp CTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCC
T ss_pred cCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCch
Confidence 456899999999999999999999999 9999998875443
No 317
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=72.54 E-value=2.2 Score=37.86 Aligned_cols=39 Identities=18% Similarity=0.140 Sum_probs=28.2
Q ss_pred HhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 163 RTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 163 ~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
++.|+=+|++|+|+|. ..+|++++..|.+. ..|+++...
T Consensus 9 ~~~~~~~~~~v~IiGa-G~iG~~ia~~L~~~-~~V~V~~R~ 47 (365)
T 2z2v_A 9 HHHIEGRHMKVLILGA-GNIGRAIAWDLKDE-FDVYIGDVN 47 (365)
T ss_dssp -------CCEEEEECC-SHHHHHHHHHHTTT-SEEEEEESC
T ss_pred cccccCCCCeEEEEcC-CHHHHHHHHHHHcC-CeEEEEECC
Confidence 3467789999999997 56799999999988 899999753
No 318
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=72.53 E-value=2 Score=36.90 Aligned_cols=42 Identities=17% Similarity=0.359 Sum_probs=29.8
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
+++..-++|+|||.+.+ |..++..|.+.|..|+++ .....++
T Consensus 14 ~~~~~~~kI~IiGaGa~-G~~~a~~L~~~G~~V~l~-~~~~~~~ 55 (318)
T 3hwr_A 14 NLYFQGMKVAIMGAGAV-GCYYGGMLARAGHEVILI-ARPQHVQ 55 (318)
T ss_dssp ------CEEEEESCSHH-HHHHHHHHHHTTCEEEEE-CCHHHHH
T ss_pred hhhccCCcEEEECcCHH-HHHHHHHHHHCCCeEEEE-EcHhHHH
Confidence 56677899999998765 999999999999999999 4433333
No 319
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=72.14 E-value=3.9 Score=35.25 Aligned_cols=51 Identities=22% Similarity=0.216 Sum_probs=38.3
Q ss_pred cccCCHHHHHHHH-HHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEe
Q psy7981 149 FIPCTPNGVLELI-KRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVC 200 (216)
Q Consensus 149 ~~PcTa~av~~lL-~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtic 200 (216)
.+||+....+..| +..++ -.|++|+|+|.+.-||.-...++...||.|+.+
T Consensus 130 ~l~~~~~ta~~~l~~~~~~-~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~ 181 (343)
T 3gaz_A 130 VLPLVFITAWEGLVDRAQV-QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT 181 (343)
T ss_dssp TSHHHHHHHHHHHTTTTCC-CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred HhhhhHHHHHHHHHHhcCC-CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE
Confidence 3455444444444 43333 369999999998899999999999999999888
No 320
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=71.77 E-value=2.9 Score=37.44 Aligned_cols=50 Identities=20% Similarity=0.259 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCC
Q psy7981 153 TPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSK 203 (216)
Q Consensus 153 Ta~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~ 203 (216)
|+.+.+++.+...-++.|++|+|||-+ -+|+-++..|...|+ .|+++...
T Consensus 150 ~a~~av~~a~~~~~~l~g~~VlIiGaG-~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 150 IGSAAVELAERELGSLHDKTVLVVGAG-EMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp HHHHHHHHHHHHHSCCTTCEEEEESCC-HHHHHHHHHHHHHCCSEEEEECSS
T ss_pred HHHHHHHHHHHHhccccCCEEEEEChH-HHHHHHHHHHHHCCCCEEEEEeCC
Confidence 444444544422126799999999985 569999999999999 89998753
No 321
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=71.49 E-value=26 Score=25.23 Aligned_cols=60 Identities=23% Similarity=0.367 Sum_probs=42.0
Q ss_pred HHHHHHHHHHhcCCCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHh
Q psy7981 25 GLKERVKKLKERLPDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKL 94 (216)
Q Consensus 25 ~ik~~v~~l~~~~~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~l 94 (216)
.|+.-+..++. +-+| |+++.-| +|.--++--++-|++-|+.+.+.. ++..+|+-..++++
T Consensus 39 dirdiiksmkd---ngkp-lvvfvng---asqndvnefqneakkegvsydvlk---stdpeeltqrvref 98 (112)
T 2lnd_A 39 DIRDIIKSMKD---NGKP-LVVFVNG---ASQNDVNEFQNEAKKEGVSYDVLK---STDPEELTQRVREF 98 (112)
T ss_dssp HHHHHHHHHTT---CCSC-EEEEECS---CCHHHHHHHHHHHHHHTCEEEEEE---CCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHh---cCCe-EEEEecC---cccccHHHHHHHHHhcCcchhhhc---cCCHHHHHHHHHHH
Confidence 34444455542 3456 6666656 788888888999999999998875 55678888777665
No 322
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=71.21 E-value=19 Score=28.99 Aligned_cols=65 Identities=14% Similarity=0.009 Sum_probs=42.7
Q ss_pred CCceEEEEEeC---CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeC
Q psy7981 40 FEPGLAIVQVG---GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQM 107 (216)
Q Consensus 40 ~~P~LaiI~vg---~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvql 107 (216)
...++++|.-. +++--..+++...++|++.|+++..... +.+.++..+.++.+. +.+|+||++.-
T Consensus 18 ~~~~Ig~i~~~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~l~-~~~vdgii~~~ 85 (296)
T 3brq_A 18 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADG--KHSAEEERQAIQYLL-DLRCDAIMIYP 85 (296)
T ss_dssp -CCEEEEEECGGGCC--CHHHHHHHHHHHHHHTTCEEEEECC--TTSHHHHHHHHHHHH-HTTCSEEEEEC
T ss_pred CCceEEEEeCCcccCCchHHHHHHHHHHHHHHCCCEEEEEeC--CCCHHHHHHHHHHHH-hcCCCEEEEec
Confidence 45577777654 3444556678888999999998876543 334455556666665 34799999863
No 323
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=70.88 E-value=39 Score=27.05 Aligned_cols=68 Identities=10% Similarity=-0.009 Sum_probs=45.8
Q ss_pred CCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCC
Q psy7981 39 DFEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPL 109 (216)
Q Consensus 39 ~~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL 109 (216)
+....+++|.-. +++--...++...+.|++.|.++....... +.+.-.+.++.+.. .+|+||++.-.-
T Consensus 5 ~~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~l~~-~~vdgiIi~~~~ 73 (276)
T 3jy6_A 5 QSSKLIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDANA--DIEREKTLLRAIGS-RGFDGLILQSFS 73 (276)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECTT--CHHHHHHHHHHHHT-TTCSEEEEESSC
T ss_pred CCCcEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCC--CHHHHHHHHHHHHh-CCCCEEEEecCC
Confidence 445567777644 234445557888899999999988876554 34445566666653 479999997443
No 324
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=70.77 E-value=3.7 Score=36.25 Aligned_cols=49 Identities=10% Similarity=0.158 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 153 TPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 153 Ta~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
|...+.++-+.. ..|++|+|||-+. +|--+|..|.+.|..||+++....
T Consensus 131 ~~~~~~~l~~~~---~~~~~vvViGgG~-~g~E~A~~l~~~g~~Vtlv~~~~~ 179 (408)
T 2gqw_A 131 TLEDARRIQAGL---RPQSRLLIVGGGV-IGLELAATARTAGVHVSLVETQPR 179 (408)
T ss_dssp SHHHHHHHHTTC---CTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CHHHHHHHHHHh---hcCCeEEEECCCH-HHHHHHHHHHhCCCEEEEEEeCCc
Confidence 444444443322 2589999999775 599999999999999999987653
No 325
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=70.48 E-value=20 Score=29.00 Aligned_cols=64 Identities=16% Similarity=0.171 Sum_probs=47.1
Q ss_pred CCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEE
Q psy7981 39 DFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIV 105 (216)
Q Consensus 39 ~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlv 105 (216)
.-+|+.+||. |.+ ++.-+.+.-.+.++++||.|+.......-+.+++.+.+++..++ .+.-||.
T Consensus 10 ~m~~~V~Iim-GS~-SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~~~-g~~ViIa 73 (174)
T 3kuu_A 10 AAGVKIAIVM-GSK-SDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEAN-GLHVIIA 73 (174)
T ss_dssp CCCCCEEEEE-SSG-GGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTT-TCSEEEE
T ss_pred cCCCcEEEEE-CcH-HHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhC-CCcEEEE
Confidence 3457665554 533 34555677778999999999999999999999999999887543 4444554
No 326
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=70.37 E-value=4.2 Score=34.65 Aligned_cols=39 Identities=21% Similarity=0.123 Sum_probs=31.4
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
.-++|.|||-+ .+|.+++..|.+.|..|+++.......+
T Consensus 20 ~m~~I~iIG~G-~mG~~~A~~l~~~G~~V~~~dr~~~~~~ 58 (310)
T 3doj_A 20 HMMEVGFLGLG-IMGKAMSMNLLKNGFKVTVWNRTLSKCD 58 (310)
T ss_dssp CSCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSGGGGH
T ss_pred cCCEEEEECcc-HHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 45789999976 5699999999999999999976433333
No 327
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=70.24 E-value=4.4 Score=35.59 Aligned_cols=39 Identities=15% Similarity=0.047 Sum_probs=34.5
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+.++.||++-|||-+.+ |+-++.++..-|+.|..++...
T Consensus 136 ~~~l~g~tvGIiG~G~I-G~~va~~~~~fg~~v~~~d~~~ 174 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRI-GSRVAMYGLAFGMKVLCYDVVK 174 (334)
T ss_dssp BCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSC
T ss_pred cceecCcEEEEECcchH-HHHHHHhhcccCceeeecCCcc
Confidence 35789999999999887 9999999999999999887654
No 328
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=70.06 E-value=1.3 Score=39.55 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=34.4
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCCCCChHHH
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSKTKNIQDV 210 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~T~~l~~~ 210 (216)
+++++|+|||.+.+ |.+++..|...|. ++|++...+-++...
T Consensus 32 L~~~~VlIvGaGGl-Gs~va~~La~aGVg~ItlvD~D~Ve~SNL 74 (340)
T 3rui_A 32 IKNTKVLLLGAGTL-GCYVSRALIAWGVRKITFVDNGTVSYSNP 74 (340)
T ss_dssp HHTCEEEEECCSHH-HHHHHHHHHHTTCCEEEEECCCBCCTTST
T ss_pred HhCCEEEEECCCHH-HHHHHHHHHHcCCCEEEEecCCEeccccc
Confidence 68999999999876 9999999999884 799988766544433
No 329
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=70.00 E-value=4.2 Score=33.90 Aligned_cols=36 Identities=17% Similarity=0.239 Sum_probs=31.5
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..+++|+|||.+. +|.-++..|.+.+..||+.+...
T Consensus 157 ~~~~~v~VvG~G~-~g~e~A~~l~~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 157 FRNKPLAVIGGGD-SAMEEANFLTKYGSKVYIIHRRD 192 (333)
T ss_dssp GTTSEEEEECCSH-HHHHHHHHHTTTSSEEEEECSSS
T ss_pred cCCCeEEEECCCh-HHHHHHHHHHhcCCeEEEEecCC
Confidence 4799999999775 59999999999999999998754
No 330
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=69.90 E-value=3.9 Score=37.92 Aligned_cols=39 Identities=21% Similarity=0.235 Sum_probs=33.7
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..++.||+|+|||-+.+ |-=++..|.+.+..||+++...
T Consensus 173 ~~~~~~krV~VIG~G~s-gve~a~~l~~~~~~Vtv~~r~~ 211 (540)
T 3gwf_A 173 GKSLAGRRVGVIGTGST-GQQVITSLAPEVEHLTVFVRTP 211 (540)
T ss_dssp SCCCTTSEEEEECCSHH-HHHHHHHHTTTCSEEEEEESSC
T ss_pred ccccccceEEEECCCch-HHHHHHHHHhhCCEEEEEECCC
Confidence 45689999999997765 9999999999999999998653
No 331
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=69.73 E-value=6 Score=42.65 Aligned_cols=43 Identities=26% Similarity=0.295 Sum_probs=37.9
Q ss_pred HHhCCCCCCCeEEEecCCCc-ccHHHHHHhhhCCCEEEEecCCC
Q psy7981 162 KRTNVTIAGTNAVVLGRSKI-VGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 162 ~~~~i~l~Gk~vvViGrS~~-VG~Pla~lL~~~~ATVtichs~T 204 (216)
...+.++.||.|+|.|-|.- +|+-++..|.++||+|.++..+.
T Consensus 644 ~~~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~ 687 (1878)
T 2uv9_A 644 ARSGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRF 687 (1878)
T ss_dssp HHHCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cccCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 34678899999999999998 99999999999999999985443
No 332
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=69.70 E-value=3 Score=39.30 Aligned_cols=39 Identities=21% Similarity=0.209 Sum_probs=33.5
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhC-CCEEEEecCCCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWK-HATVTVCHSKTKN 206 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~-~ATVtichs~T~~ 206 (216)
+++++|+|.|.+..+|+-++..|+++ |++|+.+......
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~ 352 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA 352 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTT
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchh
Confidence 47899999999999999999999998 8999988765443
No 333
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=69.67 E-value=3.8 Score=30.52 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=29.0
Q ss_pred CCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 170 GTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 170 Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..+|+|+|-+. +|..++..|...|..|++....-
T Consensus 7 ~~~viIiG~G~-~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGR-VGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSH-HHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCH-HHHHHHHHHHHCCCCEEEEECCH
Confidence 35899999755 79999999999999999997643
No 334
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=69.63 E-value=3.3 Score=36.69 Aligned_cols=35 Identities=11% Similarity=0.112 Sum_probs=29.4
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+++++|.|||-+ .+|.+++..|.+.|.+|+++...
T Consensus 20 m~~mkIgiIGlG-~mG~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGLG-RMGADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEECch-HHHHHHHHHHHhCCCEEEEEeCC
Confidence 467899999965 56999999999999999999764
No 335
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=69.53 E-value=4.7 Score=36.60 Aligned_cols=37 Identities=22% Similarity=0.271 Sum_probs=31.6
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSKTK 205 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~T~ 205 (216)
..||+|+|||-++ +|.=++..+.+.|+ .||+.+..+.
T Consensus 262 ~~gk~VvVIGgG~-~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 262 AAGKHVVVLGGGD-TAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCCSEEEEECSSH-HHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred cCCCEEEEECCCh-hHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 6899999999876 48889988888998 5999987764
No 336
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=69.52 E-value=4 Score=35.87 Aligned_cols=39 Identities=15% Similarity=0.082 Sum_probs=30.5
Q ss_pred CCCCCeEEEecCCCc-------------------ccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 167 TIAGTNAVVLGRSKI-------------------VGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~-------------------VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
++.||++|+|=.+.+ -|.-+|..+..+||.||..|..+.
T Consensus 33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 689999444432332 889999999999999999998663
No 337
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=69.41 E-value=3.7 Score=43.66 Aligned_cols=39 Identities=26% Similarity=0.257 Sum_probs=35.0
Q ss_pred CCCCCCCeEEEecCCCc-ccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKI-VGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~-VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.++.||.|+|.|-|.= +|+-++..|.++||+|.++.++
T Consensus 471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R 510 (1688)
T 2pff_A 471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSR 510 (1688)
T ss_dssp CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESS
T ss_pred ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCC
Confidence 56789999999999997 9999999999999999998433
No 338
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=69.40 E-value=14 Score=29.78 Aligned_cols=67 Identities=10% Similarity=-0.021 Sum_probs=42.8
Q ss_pred CceEEEEEeCC---CcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCC
Q psy7981 41 EPGLAIVQVGG---REDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMP 108 (216)
Q Consensus 41 ~P~LaiI~vg~---~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlP 108 (216)
...+++|.-.- ++--..+++...++|++.|.++.......+.+.++..+.++.+.. ..|+||++.-+
T Consensus 5 ~~~Ig~v~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~-~~vdgii~~~~ 74 (289)
T 3brs_A 5 QYYMICIPKVLDDSSDFWSVLVEGAQMAAKEYEIKLEFMAPEKEEDYLVQNELIEEAIK-RKPDVILLAAA 74 (289)
T ss_dssp CCEEEEECSCCCSSSHHHHHHHHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHH-TCCSEEEECCS
T ss_pred CcEEEEEeCCCCCCchHHHHHHHHHHHHHHHcCCEEEEecCCCCCCHHHHHHHHHHHHH-hCCCEEEEeCC
Confidence 44566665432 333344567788899999988876554323455555666666654 47999998643
No 339
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=69.19 E-value=11 Score=33.11 Aligned_cols=50 Identities=18% Similarity=0.189 Sum_probs=39.2
Q ss_pred CHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCC
Q psy7981 153 TPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKN 206 (216)
Q Consensus 153 Ta~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~ 206 (216)
|.....++-+... .|++|+|||.+ .+|..+|..|.+.+..||+.+....-
T Consensus 129 ~~~d~~~l~~~~~---~~~~vvViGgG-~~g~E~A~~l~~~g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 129 TYGDVQVLRDSWT---SATRLLIVGGG-LIGCEVATTARKLGLSVTILEAGDEL 178 (410)
T ss_dssp SHHHHHHHHHHCC---TTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cHHHHHHHHHHhc---cCCeEEEECCC-HHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 6666666555332 68999999965 56999999999999999999987653
No 340
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=69.03 E-value=14 Score=29.76 Aligned_cols=67 Identities=10% Similarity=0.038 Sum_probs=42.7
Q ss_pred CCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCC
Q psy7981 39 DFEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMP 108 (216)
Q Consensus 39 ~~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlP 108 (216)
+....++++.-. +++-...+++...++|++.|.++.... .+.+.++..+.++.+.. ..|+||++.-.
T Consensus 5 ~~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~l~~-~~vdgii~~~~ 72 (289)
T 1dbq_A 5 NHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGN--AWNNLEKQRAYLSMMAQ-KRVDGLLVMCS 72 (289)
T ss_dssp ---CEEEEEESCTTSHHHHHHHHHHHHHHHHHTCEEEEEE--CTTCHHHHHHHHHHHHH-TTCSEEEEECS
T ss_pred CCCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCCeEEEEc--CCCChHHHHHHHHHHHh-CCCCEEEEEec
Confidence 344567777643 234444556788899999999887654 33455666666777653 47999998643
No 341
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=68.97 E-value=4.1 Score=33.92 Aligned_cols=41 Identities=2% Similarity=0.046 Sum_probs=35.9
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
+.++++++++|||-+...+.-++.++.+.+..||+.+....
T Consensus 141 ~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~ 181 (304)
T 4fk1_A 141 GWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNE 181 (304)
T ss_dssp SGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCC
T ss_pred hhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEecccc
Confidence 45678999999999999999999999999999999987654
No 342
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=68.85 E-value=22 Score=28.38 Aligned_cols=62 Identities=11% Similarity=0.098 Sum_probs=45.4
Q ss_pred CceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEE
Q psy7981 41 EPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIV 105 (216)
Q Consensus 41 ~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlv 105 (216)
.|+.+|| .|.+ ++.-+.+.-.+.++++|+.|+.......-+.+++.+.++++.++ .+.-||.
T Consensus 3 ~~~V~Ii-mgs~-SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~-g~~ViIa 64 (163)
T 3ors_A 3 AMKVAVI-MGSS-SDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARER-GINIIIA 64 (163)
T ss_dssp CCCEEEE-ESCG-GGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTT-TCCEEEE
T ss_pred CCeEEEE-ECcH-HHHHHHHHHHHHHHHcCCCEEEEEECCcCCHHHHHHHHHHHHhC-CCcEEEE
Confidence 3555555 4533 34555667778899999999999999999999999999988653 3444444
No 343
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=68.84 E-value=16 Score=29.34 Aligned_cols=61 Identities=11% Similarity=-0.030 Sum_probs=40.5
Q ss_pred CCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEE
Q psy7981 40 FEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGII 104 (216)
Q Consensus 40 ~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIl 104 (216)
....++++.-. +++-...+.+...+.|++.|.++......+...+.++++. +. ...|+||+
T Consensus 4 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~---l~-~~~vdgiI 65 (280)
T 3gyb_A 4 RTQLIAVLIDDYSNPWFIDLIQSLSDVLTPKGYRLSVIDSLTSQAGTDPITS---AL-SMRPDGII 65 (280)
T ss_dssp CCCEEEEEESCTTSGGGHHHHHHHHHHHGGGTCEEEEECSSSSCSSSCHHHH---HH-TTCCSEEE
T ss_pred ccCEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEEEeCCCchHHHHHHHH---HH-hCCCCEEE
Confidence 44566776643 3455566778889999999999988877622233344444 42 34799999
No 344
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=68.62 E-value=4.5 Score=36.58 Aligned_cols=40 Identities=8% Similarity=0.019 Sum_probs=34.9
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhC---CCEEEEecCCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWK---HATVTVCHSKTK 205 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~---~ATVtichs~T~ 205 (216)
-..+||+|+|.|.+..+|+-++..|+++ |++|+.+.+...
T Consensus 69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~ 111 (478)
T 4dqv_A 69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAES 111 (478)
T ss_dssp CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSS
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCC
Confidence 4568999999999999999999999998 899998876443
No 345
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=68.60 E-value=4 Score=33.76 Aligned_cols=38 Identities=24% Similarity=0.326 Sum_probs=32.2
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.+.|++|+|||.+. +|.-++..|.+.+..||+++....
T Consensus 151 ~~~~~~v~vvG~g~-~~~e~a~~l~~~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 151 KFAGRRVAILGGGD-SAVDWALMLEPIAKEVSIIHRRDK 188 (332)
T ss_dssp GGBTCEEEEECSSH-HHHHHHHHHTTTBSEEEEECSSSS
T ss_pred HcCCCEEEEECCCH-hHHHHHHHHHhhCCeEEEEEecCc
Confidence 34799999999755 599999999999999999987653
No 346
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=68.57 E-value=19 Score=29.01 Aligned_cols=62 Identities=16% Similarity=0.143 Sum_probs=46.1
Q ss_pred CceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEE
Q psy7981 41 EPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIV 105 (216)
Q Consensus 41 ~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlv 105 (216)
+|+.+||. |.+ ++.-+.+.-.+.++++||.|+.......-+.+++.+.+++..++ .+.-||.
T Consensus 6 ~~~V~Iim-gS~-SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~-g~~ViIa 67 (169)
T 3trh_A 6 KIFVAILM-GSD-SDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNR-GCAVFIA 67 (169)
T ss_dssp CCEEEEEE-SCG-GGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHHT-TEEEEEE
T ss_pred CCcEEEEE-CcH-HhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhC-CCcEEEE
Confidence 57655554 533 34555677778999999999999999999999999999887544 4444444
No 347
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=68.54 E-value=4.7 Score=33.28 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=31.7
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
...|++|+|||-+. +|.-++..|.+.+..||+++...
T Consensus 140 ~~~~~~v~VvG~G~-~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 140 FYKNKEVAVLGGGD-TAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp GGTTSEEEEECCSH-HHHHHHHHHHTTSSEEEEECSSS
T ss_pred hcCCCEEEEECCCH-HHHHHHHHHHhcCCEEEEEeeCC
Confidence 35789999999665 59999999999999999998754
No 348
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=68.37 E-value=4.6 Score=33.42 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=32.8
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
...|++|+|||-+. .|.-++..|.+.+..||+++....
T Consensus 170 ~~~~~~v~vvG~G~-~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 170 IFRNKPLAVIGGGD-SACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp GGTTSEEEEECSSH-HHHHHHHHHTTTSSEEEEECSSSS
T ss_pred hcCCCEEEEECCCH-HHHHHHHHHHhcCCEEEEEEcCCc
Confidence 45799999999665 699999999999999999997654
No 349
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=68.00 E-value=4.6 Score=34.91 Aligned_cols=52 Identities=21% Similarity=0.229 Sum_probs=38.0
Q ss_pred ccCCHHHHHHHH-HHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 150 IPCTPNGVLELI-KRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 150 ~PcTa~av~~lL-~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
+||....++..| +..++ -.|++|+|.|-+.-||.-.+.++...||+|+.+-.
T Consensus 148 l~~~~~ta~~~l~~~~~~-~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~ 200 (353)
T 4dup_A 148 LPETFFTVWANLFQMAGL-TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG 200 (353)
T ss_dssp SHHHHHHHHHHHTTTTCC-CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred hhhHHHHHHHHHHHhcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 444434444444 32333 36999999999999999999999999999988764
No 350
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=67.12 E-value=6.3 Score=36.46 Aligned_cols=40 Identities=23% Similarity=0.147 Sum_probs=30.7
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+.-+.+|+|.+||-+.+--..+|.+|.++|+.|+++..+.
T Consensus 14 ~~~~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~ 53 (524)
T 3hn7_A 14 NLYFQGMHIHILGICGTFMGSLALLARALGHTVTGSDANI 53 (524)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred ceeecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCC
Confidence 3456899999999998744468999999999999999864
No 351
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=67.01 E-value=2.9 Score=36.26 Aligned_cols=43 Identities=14% Similarity=0.256 Sum_probs=33.4
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCC-CEEEEecCCCCChHHH
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKH-ATVTVCHSKTKNIQDV 210 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~-ATVtichs~T~~l~~~ 210 (216)
.|++++|+|||-+.+ |.|++.+|...| -++|++...+-++..+
T Consensus 33 kL~~~~VlVvGaGGl-Gs~va~~La~aGVG~i~lvD~D~Ve~sNL 76 (292)
T 3h8v_A 33 KIRTFAVAIVGVGGV-GSVTAEMLTRCGIGKLLLFDYDKVELANM 76 (292)
T ss_dssp GGGGCEEEEECCSHH-HHHHHHHHHHHTCSEEEEECCCBC-----
T ss_pred HHhCCeEEEECcCHH-HHHHHHHHHHcCCCEEEEECCCccChhhc
Confidence 478999999999876 999999999887 5899998877544433
No 352
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=66.85 E-value=4.6 Score=33.31 Aligned_cols=36 Identities=25% Similarity=0.212 Sum_probs=31.1
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..|++|+|||-+. +|--++..|.+.+..||+++...
T Consensus 142 ~~~~~v~VvG~G~-~g~e~A~~l~~~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 142 FKGKRVAVIGGGN-SGVEAAIDLAGIVEHVTLLEFAP 177 (310)
T ss_dssp GBTCEEEEECCSH-HHHHHHHHHHTTBSEEEEECSSS
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHhCCEEEEEEeCc
Confidence 4699999999775 59999999999999999998654
No 353
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=66.60 E-value=11 Score=32.12 Aligned_cols=52 Identities=21% Similarity=0.171 Sum_probs=39.4
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
.+||+....+..|+..++ -.|.+|+|+|.+ -||.-...++...||+|+..-+
T Consensus 147 ~l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG-~vG~~a~qla~~~Ga~Vi~~~~ 198 (340)
T 3s2e_A 147 PILCAGVTVYKGLKVTDT-RPGQWVVISGIG-GLGHVAVQYARAMGLRVAAVDI 198 (340)
T ss_dssp GGGTHHHHHHHHHHTTTC-CTTSEEEEECCS-TTHHHHHHHHHHTTCEEEEEES
T ss_pred cccchhHHHHHHHHHcCC-CCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeC
Confidence 356665556666655443 369999999975 5899999999999999988754
No 354
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=66.49 E-value=33 Score=28.01 Aligned_cols=65 Identities=11% Similarity=0.018 Sum_probs=45.2
Q ss_pred ceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCC
Q psy7981 42 PGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPL 109 (216)
Q Consensus 42 P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL 109 (216)
.++++|.-. +++-....++...++|++.|+++...... .+.++-.+.++.+.. ..|+||++.-+-
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~--~~~~~~~~~i~~l~~-~~vdgiIi~~~~ 68 (313)
T 3m9w_A 3 VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSAN--GNEETQMSQIENMIN-RGVDVLVIIPYN 68 (313)
T ss_dssp CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEECT--TCHHHHHHHHHHHHH-TTCSEEEEECSS
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCC--CCHHHHHHHHHHHHH-cCCCEEEEeCCC
Confidence 356666653 35666777889999999999998877653 344555566666644 369999997443
No 355
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.47 E-value=12 Score=27.88 Aligned_cols=78 Identities=14% Similarity=0.177 Sum_probs=49.3
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHHHhc-CCCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHH
Q psy7981 10 AQILSGTAVSGDIREGLKERVKKLKER-LPDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELL 88 (216)
Q Consensus 10 a~il~Gk~vA~~i~~~ik~~v~~l~~~-~~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 88 (216)
..+|.|.. ..--|+++++.++.+--. ...+.-+.-.+.+|+++.+ +|.+.|+++||... ++++|+
T Consensus 27 ~~v~TG~l-~~~~R~e~~~~i~~~Ggkv~~sVSkkTd~LV~G~~~g~-----sKl~KA~~lgI~Ii--------sE~~f~ 92 (112)
T 2ebu_A 27 IFVITGVL-ESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQ-----SKSDKAAALGTKII--------DEDGLL 92 (112)
T ss_dssp EEEECSCC-SSSCHHHHHHHHHHTTCEECSSCCSSCCEEEECSSCCS-----HHHHHHHHHTCEEE--------EHHHHH
T ss_pred EEEEeeeC-CCCCHHHHHHHHHHcCCEEeccccCCeeEEEecCCCCh-----HHHHHHHHcCCeEE--------eHHHHH
Confidence 34455642 111246666666554211 0134567778888988762 48888999998654 579999
Q ss_pred HHHHHhcCCCCcc
Q psy7981 89 SRLKKLNEDPSVH 101 (216)
Q Consensus 89 ~~I~~lN~D~~V~ 101 (216)
+.|+...+++.-.
T Consensus 93 ~ll~~~~~~~~~~ 105 (112)
T 2ebu_A 93 NLIRTMPGKKSKY 105 (112)
T ss_dssp HHHHHSCCCCCSS
T ss_pred HHHhhCCCccccc
Confidence 9999877665544
No 356
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=66.36 E-value=25 Score=28.64 Aligned_cols=64 Identities=16% Similarity=0.117 Sum_probs=42.6
Q ss_pred ceEEEEEeCC-CcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 42 PGLAIVQVGG-REDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 42 P~LaiI~vg~-~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
-++++|.-+. ++--....+...++|++.|+++....-....+.++-.+.++.+-.. .|+||++.
T Consensus 4 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~-~vdgiii~ 68 (297)
T 3rot_A 4 DKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAPPGANDVPKQVQFIESALAT-YPSGIATT 68 (297)
T ss_dssp CEEEEECSCCCSHHHHHHHHHHHHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHT-CCSEEEEC
T ss_pred EEEEEEecCCCCchHHHHHHHHHHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHc-CCCEEEEe
Confidence 4566665543 3444455677889999999998876643223556666677766543 69999985
No 357
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=65.96 E-value=5.3 Score=33.33 Aligned_cols=36 Identities=17% Similarity=0.215 Sum_probs=31.2
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+.|++|+|||-+. +|.-++..|.+.+..||+++...
T Consensus 150 ~~~~~v~viG~G~-~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 150 FQGKRVLIVGGGD-SAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp GTTCEEEEECSSH-HHHHHHHHTTTTSSEEEEECSSS
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHhhCCEEEEEEcCC
Confidence 4799999999765 59999999999999999998754
No 358
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=65.36 E-value=5.9 Score=32.70 Aligned_cols=36 Identities=17% Similarity=0.220 Sum_probs=31.5
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..+++|+|||.+. +|--++..|.+.+..||+++...
T Consensus 143 ~~~~~v~ViG~G~-~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 143 YRNQKVAVIGGGN-TAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp GTTSEEEEECSSH-HHHHHHHHHTTTSSEEEEECSSS
T ss_pred cCCCeEEEECCCH-HHHHHHHHHHhcCCeEEEEEeCC
Confidence 4799999999775 59999999999999999998754
No 359
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=65.26 E-value=20 Score=29.52 Aligned_cols=62 Identities=13% Similarity=0.096 Sum_probs=44.6
Q ss_pred ceEEEEEeCCCc----c--hHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCC
Q psy7981 42 PGLAIVQVGGRE----D--SNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPL 109 (216)
Q Consensus 42 P~LaiI~vg~~~----a--s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL 109 (216)
.++.+|....+. . +...++.-.+.+++.|.+++.+.+.+....++..+.+.. -|+|+++.|+
T Consensus 26 ~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~~~~Dv~~~~~~l~~------aD~iv~~~P~ 93 (218)
T 3rpe_A 26 SNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTVDQGYDIESEIENYLW------ADTIIYQMPA 93 (218)
T ss_dssp CCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGGGCCCHHHHHHHHHH------CSEEEEEEEC
T ss_pred cceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECCCccCHHHHHHHHHh------CCEEEEECCh
Confidence 466777666653 2 345566677777888999999999877665655555543 4699999998
No 360
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=65.21 E-value=6 Score=35.15 Aligned_cols=51 Identities=20% Similarity=0.266 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 153 TPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 153 Ta~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
|...+..+-+... ...|++++|||-+ .+|.-+|..|.+.|..||+++....
T Consensus 132 ~~~~~~~~~~~~~-~~~~~~vvViGgG-~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 132 LPPDALAIREYME-KYKVENVVIIGGG-YIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp STHHHHHHHHHHS-SSCCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CHHHHHHHHHHHH-hcCCCeEEEECCC-HHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 4455555444321 3479999999966 4699999999999999999987543
No 361
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=65.13 E-value=6.2 Score=32.89 Aligned_cols=37 Identities=24% Similarity=0.306 Sum_probs=31.5
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
...|++|+|||-+. +|--++..|.+.+..||+++...
T Consensus 149 ~~~~~~v~VvG~G~-~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 149 FYKGKKVVVIGGGD-AAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp GGTTCEEEEECCSH-HHHHHHHHHTTTCSEEEEECSSS
T ss_pred HcCCCEEEEECCCH-HHHHHHHHHHhcCCEEEEEeCCC
Confidence 45789999999665 59999999999999999998754
No 362
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=65.07 E-value=53 Score=26.67 Aligned_cols=62 Identities=18% Similarity=0.204 Sum_probs=45.0
Q ss_pred CceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEE
Q psy7981 41 EPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIV 105 (216)
Q Consensus 41 ~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlv 105 (216)
.| |+.|..|.+ ++.-+.+.-.+.++++||+++.......-+.+++.+.+++.-++ .+.-||.
T Consensus 13 ~~-~V~IimGS~-SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~-g~~ViIa 74 (183)
T 1o4v_A 13 VP-RVGIIMGSD-SDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEER-GIEVIIA 74 (183)
T ss_dssp -C-EEEEEESCG-GGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTT-TCCEEEE
T ss_pred CC-eEEEEeccH-HHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhC-CCcEEEE
Confidence 45 555566644 44555666778899999999999999999999999999887443 3444544
No 363
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=64.64 E-value=39 Score=27.41 Aligned_cols=63 Identities=14% Similarity=0.106 Sum_probs=47.1
Q ss_pred CceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 41 EPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 41 ~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
+|. +.|..|.+.+-. ..+.-.+.++++||.|+.......-+.+++.+.+++..++ .+.-||.-
T Consensus 22 kp~-V~IimGS~SD~~-v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~-g~~ViIa~ 84 (181)
T 4b4k_A 22 KSL-VGVIMGSTSDWE-TMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARER-GLKVIIAG 84 (181)
T ss_dssp CCS-EEEEESSGGGHH-HHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTT-TCCEEEEE
T ss_pred Ccc-EEEEECCHhHHH-HHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhc-CceEEEEe
Confidence 454 455567555544 4566678899999999999999999999999999887654 45555554
No 364
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=64.48 E-value=5.1 Score=39.96 Aligned_cols=51 Identities=16% Similarity=0.147 Sum_probs=40.2
Q ss_pred CHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 153 TPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 153 Ta~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
|+.++.++++.+. ...|++|+|||-+. +|--+|..|.+.|+.||+++....
T Consensus 268 ~~~~~~~~l~~~~-~~~gk~vvViGgG~-~g~E~A~~L~~~G~~Vtvv~~~~~ 318 (965)
T 2gag_A 268 LAGAVRSYLNRYG-VRAGARIAVATTND-SAYELVRELAATGGVVAVIDARSS 318 (965)
T ss_dssp EHHHHHHHHHTTC-EESCSSEEEEESST-THHHHHHHHGGGTCCSEEEESCSS
T ss_pred EhHHHHHHHHhcC-CCCCCeEEEEcCCH-HHHHHHHHHHHcCCcEEEEECCCc
Confidence 4466666776554 34699999999764 699999999999999999997654
No 365
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=64.15 E-value=38 Score=27.20 Aligned_cols=67 Identities=13% Similarity=0.017 Sum_probs=43.6
Q ss_pred CCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCC
Q psy7981 39 DFEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMP 108 (216)
Q Consensus 39 ~~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlP 108 (216)
+....+++|.-+ +++--....+...++|++.|+++...... .+.+...+.++.+.. ..|+||++.-+
T Consensus 6 ~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~--~~~~~~~~~~~~l~~-~~vdgiI~~~~ 73 (293)
T 3l6u_A 6 PKRNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQ--NSRISEREQILEFVH-LKVDAIFITTL 73 (293)
T ss_dssp ---CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECS--SCHHHHHHHHHHHHH-TTCSEEEEECS
T ss_pred CCCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCC--CCHHHHHHHHHHHHH-cCCCEEEEecC
Confidence 345667777654 23344455678889999999998877654 344555666666654 47999999643
No 366
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=63.77 E-value=5.1 Score=32.84 Aligned_cols=38 Identities=18% Similarity=0.240 Sum_probs=32.3
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
...+++|+|||.+. +|..++..|.+.+..||+++....
T Consensus 151 ~~~~~~v~vvG~G~-~~~e~a~~l~~~g~~v~~~~~~~~ 188 (323)
T 3f8d_A 151 LFKNRVVAVIGGGD-SALEGAEILSSYSTKVYLIHRRDT 188 (323)
T ss_dssp GGTTCEEEEECCSH-HHHHHHHHHHHHSSEEEEECSSSS
T ss_pred HcCCCEEEEECCCH-HHHHHHHHHHHhCCeEEEEEeCCC
Confidence 45789999999665 599999999999999999987654
No 367
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=63.70 E-value=46 Score=25.30 Aligned_cols=63 Identities=16% Similarity=0.256 Sum_probs=48.1
Q ss_pred CceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCC
Q psy7981 41 EPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPL 109 (216)
Q Consensus 41 ~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL 109 (216)
.+++.||...........++...+.+++.|++++.+.+.+..+.+++...+.+ -++|++=.|-
T Consensus 4 ~~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~------~d~ii~Gspt 66 (159)
T 3fni_A 4 ETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGAAVDLQELRELVGR------CTGLVIGMSP 66 (159)
T ss_dssp CCEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESSSCCCHHHHHHHHHT------EEEEEEECCB
T ss_pred CCEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECcCcCCHHHHHHHHHh------CCEEEEEcCc
Confidence 46788888887778889999999999999999999998864245666554433 3688887775
No 368
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=63.60 E-value=7 Score=33.16 Aligned_cols=54 Identities=15% Similarity=0.186 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHhCCCCCCC-eEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 153 TPNGVLELIKRTNVTIAGT-NAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 153 Ta~av~~lL~~~~i~l~Gk-~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
|+...+.-+++.++. .|. +|+|.|.|.-||.-...++...||.|+..-+....+
T Consensus 134 ta~~~l~~~~~~~~~-~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~ 188 (330)
T 1tt7_A 134 TAALSVHRLEQNGLS-PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA 188 (330)
T ss_dssp HHHHHHHHHHHTTCC-GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH
T ss_pred HHHHHHHHHHhcCcC-CCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 444444444444443 354 899999999999999999998999988766543333
No 369
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=63.55 E-value=6.8 Score=32.90 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=31.3
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..|++|+|||-+. +|--++..|.+.+..||+++...
T Consensus 153 ~~~~~v~ViG~G~-~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 153 FRDQDIAVIGGGD-SAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp GTTCEEEEECSSH-HHHHHHHHHTTTCSEEEEECSSS
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHhCCeEEEEEcCC
Confidence 4799999999665 59999999999999999998754
No 370
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=63.52 E-value=12 Score=32.26 Aligned_cols=53 Identities=21% Similarity=0.138 Sum_probs=36.2
Q ss_pred cccCCHHHHHHHH-HHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCC
Q psy7981 149 FIPCTPNGVLELI-KRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSK 203 (216)
Q Consensus 149 ~~PcTa~av~~lL-~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~ 203 (216)
.+||.....+..+ +..++ -.|.+|+|+| +.-||.-...++...|| +|+.+.+.
T Consensus 171 ~l~~~~~ta~~~l~~~~~~-~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~ 225 (374)
T 2jhf_A 171 LIGCGFSTGYGSAVKVAKV-TQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDIN 225 (374)
T ss_dssp GGGTHHHHHHHHHHTTTCC-CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred hhccHHHHHHHHHHhccCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 4555433333333 33333 3699999999 46889999999999999 78777543
No 371
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=63.14 E-value=5.5 Score=37.00 Aligned_cols=38 Identities=16% Similarity=0.217 Sum_probs=33.0
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.++.||+|+|||-+.+ |--++..|.+.+..||+.+...
T Consensus 181 ~~~~~krV~VIG~G~t-gve~a~~la~~~~~Vtv~~r~~ 218 (545)
T 3uox_A 181 VDFTGKRVGVIGTGAT-GVQIIPIAAETAKELYVFQRTP 218 (545)
T ss_dssp CCCBTCEEEEECCSHH-HHHHHHHHTTTBSEEEEEESSC
T ss_pred cccCCCeEEEECCCcc-HHHHHHHHHhhCCEEEEEEcCC
Confidence 5678999999997765 9999999999999999998643
No 372
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=62.95 E-value=7.1 Score=33.59 Aligned_cols=52 Identities=17% Similarity=0.160 Sum_probs=38.0
Q ss_pred cccCCHHHHHHHHHHh-CCCCCC-CeEEEecCCCcccHHHHHHhhhCCCEEEEec
Q psy7981 149 FIPCTPNGVLELIKRT-NVTIAG-TNAVVLGRSKIVGTPAAELLKWKHATVTVCH 201 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~-~i~l~G-k~vvViGrS~~VG~Pla~lL~~~~ATVtich 201 (216)
.+||.....+..|.+. ++. .| .+|+|.|.+.-||.-...++...||+|+..-
T Consensus 146 ~l~~~~~ta~~~l~~~~~~~-~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~ 199 (364)
T 1gu7_A 146 TISVNPLTAYLMLTHYVKLT-PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVI 199 (364)
T ss_dssp TCTTHHHHHHHHHHSSSCCC-TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred hccccHHHHHHHHHHhhccC-CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 4555444455556554 333 68 9999999999999999998888999865543
No 373
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=62.76 E-value=6.4 Score=33.37 Aligned_cols=36 Identities=22% Similarity=0.234 Sum_probs=31.2
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+.|++|+|||.+. +|.-++..|.+.+..||+.+...
T Consensus 161 ~~~~~vvVvG~G~-~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 161 FKGKRVVIVGGGD-SALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp GTTCEEEEECSSH-HHHHHHHHTTTTSSEEEEECSSS
T ss_pred cCCCcEEEECCCH-HHHHHHHHHHhcCCEEEEEEcCC
Confidence 4799999999765 59999999999999999998754
No 374
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=62.73 E-value=13 Score=32.11 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=36.3
Q ss_pred cccCCHHHHHHHH-HHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCC
Q psy7981 149 FIPCTPNGVLELI-KRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSK 203 (216)
Q Consensus 149 ~~PcTa~av~~lL-~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~ 203 (216)
.+||.....+..+ +..++ -.|.+|+|+|. .-||.-...++...|| +|+.+.+.
T Consensus 172 ~l~~~~~ta~~~l~~~~~~-~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~ 226 (374)
T 1cdo_A 172 LLGCGVSTGFGAAVNTAKV-EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLN 226 (374)
T ss_dssp GGGTHHHHHHHHHHTTTCC-CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred hhccHHHHHHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4555443333333 33333 36999999995 6889999999999999 78776543
No 375
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=62.68 E-value=9.6 Score=28.90 Aligned_cols=36 Identities=17% Similarity=0.014 Sum_probs=29.3
Q ss_pred CCCCeEEEecCC---CcccHHHHHHhhhCCCEEEEecCC
Q psy7981 168 IAGTNAVVLGRS---KIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 168 l~Gk~vvViGrS---~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
++-++|.|||-| ...|.+++..|.+.|.+|+..+-+
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~ 50 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN 50 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCC
Confidence 356789999997 567889999999999998888764
No 376
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=62.52 E-value=4 Score=35.48 Aligned_cols=37 Identities=27% Similarity=0.241 Sum_probs=30.6
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
+.+++|.|||-+ .+|..++..|...|..|+++.....
T Consensus 14 l~~~~I~IIG~G-~mG~alA~~L~~~G~~V~~~~~~~~ 50 (338)
T 1np3_A 14 IQGKKVAIIGYG-SQGHAHACNLKDSGVDVTVGLRSGS 50 (338)
T ss_dssp HHTSCEEEECCS-HHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred hcCCEEEEECch-HHHHHHHHHHHHCcCEEEEEECChH
Confidence 457899999965 5599999999999999998876543
No 377
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=62.47 E-value=24 Score=27.52 Aligned_cols=66 Identities=14% Similarity=0.049 Sum_probs=47.4
Q ss_pred CCceEEEEEeCCCc------------chHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeC
Q psy7981 40 FEPGLAIVQVGGRE------------DSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQM 107 (216)
Q Consensus 40 ~~P~LaiI~vg~~~------------as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvql 107 (216)
++++.+||.+||.- .+--| ..+..++.|+++..+..-.| ..+++.+.+..+.+....|-|+.-=
T Consensus 14 ~~~~v~iitvsd~~~~~~~~~g~i~D~ng~~---L~~~L~~~G~~v~~~~iV~D-d~~~i~~al~~~~a~~~~DlVittG 89 (178)
T 3iwt_A 14 KSLNFYVITISTSRYEKLLKKEPIVDESGDI---IKQLLIENGHKIIGYSLVPD-DKIKILKAFTDALSIDEVDVIISTG 89 (178)
T ss_dssp CCCEEEEEEECHHHHHHHHTTCCCCCHHHHH---HHHHHHHTTCEEEEEEEECS-CHHHHHHHHHHHHTCTTCCEEEEES
T ss_pred CCCEEEEEEEcCCCccccccCCCCCcchHHH---HHHHHHHCCCEEEEEEEeCC-CHHHHHHHHHHHHhcCCCCEEEecC
Confidence 56899999999621 11223 46777889999876665433 4578888898888778888888875
Q ss_pred CC
Q psy7981 108 PL 109 (216)
Q Consensus 108 PL 109 (216)
=+
T Consensus 90 G~ 91 (178)
T 3iwt_A 90 GT 91 (178)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 378
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=62.39 E-value=5.1 Score=34.98 Aligned_cols=42 Identities=19% Similarity=0.200 Sum_probs=28.4
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
+++-+-++|+|+|. ..||++++.+|.+ +..|+++.....+++
T Consensus 11 ~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~ 52 (365)
T 3abi_A 11 HIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLE 52 (365)
T ss_dssp -----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHH
T ss_pred cccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHH
Confidence 45445568999998 7789999999864 578998865443333
No 379
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=62.25 E-value=3.4 Score=36.23 Aligned_cols=50 Identities=12% Similarity=0.119 Sum_probs=37.4
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEec-CCCcccHHHHHHhhhCCCEEEEec
Q psy7981 150 IPCTPNGVLELIKRTNVTIAGTNAVVLG-RSKIVGTPAAELLKWKHATVTVCH 201 (216)
Q Consensus 150 ~PcTa~av~~lL~~~~i~l~Gk~vvViG-rS~~VG~Pla~lL~~~~ATVtich 201 (216)
+||.+..++.+++... -.|.+|+|+| -+.-||.-...++...||+|+..-
T Consensus 153 l~~~~~ta~~~~~~~~--~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~ 203 (379)
T 3iup_A 153 SFVNPLTALGMVETMR--LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIV 203 (379)
T ss_dssp SSHHHHHHHHHHHHHH--HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEE
T ss_pred hhhhHHHHHHHHHHhc--cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 3555555555555544 5799999996 778889999999888899988764
No 380
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=62.08 E-value=6.9 Score=32.97 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=30.8
Q ss_pred CeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 171 TNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 171 k~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
++|.|||-+ .+|.++|..|.+.|..|+++......+
T Consensus 16 ~~I~VIG~G-~mG~~iA~~la~~G~~V~~~d~~~~~~ 51 (302)
T 1f0y_A 16 KHVTVIGGG-LMGAGIAQVAAATGHTVVLVDQTEDIL 51 (302)
T ss_dssp CEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CEEEEECCC-HHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence 689999985 569999999999999999998765443
No 381
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=62.05 E-value=4.5 Score=37.58 Aligned_cols=39 Identities=15% Similarity=0.272 Sum_probs=33.6
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..++.||+|+|||-+.+ |-=++..|.+.+..||+.+...
T Consensus 186 ~~~~~~krV~VIG~G~s-gve~a~~l~~~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 186 GVDFTGKRVGVIGTGSS-GIQSIPIIAEQAEQLFVFQRSA 224 (549)
T ss_dssp CCCCBTCEEEEECCSHH-HHHHHHHHHHHBSEEEEEESSC
T ss_pred ccccCCCEEEEECCCch-HHHHHHHHHhhCCEEEEEECCC
Confidence 45679999999997765 9999999999999999998654
No 382
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=61.99 E-value=3.8 Score=33.02 Aligned_cols=34 Identities=21% Similarity=0.090 Sum_probs=28.0
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
.+++|.||| ...+|..++..|.+.|..|+++...
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457899999 6677999999999999999998653
No 383
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=61.93 E-value=29 Score=27.69 Aligned_cols=64 Identities=9% Similarity=-0.039 Sum_probs=41.7
Q ss_pred CCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 40 FEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 40 ~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
....+++|.-. +++-...+++...+.|++.|..+....... +.+.-.+.++.+.. ..++||++.
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~l~~-~~~dgiIi~ 71 (277)
T 3e61_A 7 KSKLIGLLLPDMSNPFFTLIARGVEDVALAHGYQVLIGNSDN--DIKKAQGYLATFVS-HNCTGMIST 71 (277)
T ss_dssp ---CEEEEESCTTSHHHHHHHHHHHHHHHHTTCCEEEEECTT--CHHHHHHHHHHHHH-TTCSEEEEC
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCC--CHHHHHHHHHHHHh-CCCCEEEEe
Confidence 34456666644 344455667888899999999998776554 34444555655543 379999995
No 384
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=61.90 E-value=7.1 Score=31.89 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=32.3
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
....|++++|||.+. .|..++..|.+.+..||+.+...
T Consensus 143 ~~~~~~~v~viG~g~-~~~e~a~~l~~~g~~v~~~~~~~ 180 (315)
T 3r9u_A 143 FFYKNKEVAVLGGGD-TALEEALYLANICSKIYLIHRRD 180 (315)
T ss_dssp GGGTTSEEEEECCBH-HHHHHHHHHHTTSSEEEEECSSS
T ss_pred cccCcCEEEEECCCH-HHHHHHHHHHhhCCEEEEEEeCC
Confidence 345799999999654 69999999999999999998765
No 385
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=61.73 E-value=63 Score=26.21 Aligned_cols=65 Identities=11% Similarity=0.018 Sum_probs=41.0
Q ss_pred CCCceEEEEEeC------CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 39 DFEPGLAIVQVG------GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 39 ~~~P~LaiI~vg------~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
+....+++|.-. .++--...++...+.|++.|..+..... +.+.+...+.++.+.. ..|+||++.
T Consensus 20 ~~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~--~~~~~~~~~~~~~l~~-~~vdgiIi~ 90 (305)
T 3huu_A 20 NKTLTIGLIQKSSAPEIRQNPFNSDVLNGINQACNVRGYSTRMTVS--ENSGDLYHEVKTMIQS-KSVDGFILL 90 (305)
T ss_dssp -CCCEEEEECSCCSHHHHTSHHHHHHHHHHHHHHHHHTCEEEECCC--SSHHHHHHHHHHHHHT-TCCSEEEES
T ss_pred CCCCEEEEEeCCCccccccCcHHHHHHHHHHHHHHHCCCEEEEEeC--CCChHHHHHHHHHHHh-CCCCEEEEe
Confidence 345567776554 2344445567888999999988876543 3333444455555543 479999985
No 386
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=61.69 E-value=10 Score=32.99 Aligned_cols=33 Identities=15% Similarity=0.122 Sum_probs=29.9
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEe
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVC 200 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtic 200 (216)
-.|.+|+|+|.+.-||.-...++...||+|...
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~ 195 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIAT 195 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 579999999999999999999999999998765
No 387
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=61.63 E-value=8.4 Score=32.79 Aligned_cols=53 Identities=19% Similarity=0.148 Sum_probs=35.5
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
.+||.....+..++..++ -.|.+|+|+|.+.++|.-+..+....+++|+.+-+
T Consensus 144 ~l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~ 196 (348)
T 4eez_A 144 SITCAGVTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEES
T ss_pred hcccceeeEEeeecccCC-CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEEC
Confidence 345544445556666665 47999999999888776554444445888887754
No 388
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=61.59 E-value=5.6 Score=36.34 Aligned_cols=38 Identities=16% Similarity=0.109 Sum_probs=30.0
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhC--CCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWK--HATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~--~ATVtichs~ 203 (216)
+-+++||+|+|||-++. |.=++.-|.++ ++.||++.+.
T Consensus 241 ~~~~~gKrV~VVG~G~S-A~ei~~~L~~~~~~~~v~~~~R~ 280 (501)
T 4b63_A 241 KDKSKPYNIAVLGSGQS-AAEIFHDLQKRYPNSRTTLIMRD 280 (501)
T ss_dssp CCTTSCCEEEEECCSHH-HHHHHHHHHHHSTTCEEEEECSS
T ss_pred ccccCCcEEEEECCcHH-HHHHHHHHHhcCCCceEEEEeCC
Confidence 45689999999998887 77777777654 7899988653
No 389
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=61.59 E-value=28 Score=28.65 Aligned_cols=66 Identities=6% Similarity=-0.048 Sum_probs=46.0
Q ss_pred CCceEEEEEeCCCcchHHHHHHHHHHHHHcCc----ceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 40 FEPGLAIVQVGGREDSNVYIRMKMKAAKEIGI----DAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 40 ~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi----~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
....+++|.--.+|--...++...+.+++.|. ++.......+-+.+...+.+++|- +.+|+||++.
T Consensus 7 ~t~~IGvi~~~~~p~~~~~~~gi~~~l~~~Gy~~g~~v~l~~~~~~~~~~~~~~~~~~l~-~~~vDgII~~ 76 (302)
T 2qh8_A 7 KTAKVAVSQIVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFV-GENPDVLVGI 76 (302)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHH-HTCCSEEEEE
T ss_pred CCcEEEEEEeccChhHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCCHHHHHHHHHHHH-hCCCCEEEEC
Confidence 34567777433455555667888899999998 656554555556677777788875 5679999885
No 390
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=61.27 E-value=6.1 Score=30.19 Aligned_cols=35 Identities=14% Similarity=0.036 Sum_probs=28.9
Q ss_pred CCeEEEecCCC---cccHHHHHHhhhCCCEEEEecCCC
Q psy7981 170 GTNAVVLGRSK---IVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 170 Gk~vvViGrS~---~VG~Pla~lL~~~~ATVtichs~T 204 (216)
-++|.|||-|. ..|.+++..|.+.|.+|..++-..
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~ 50 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKV 50 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcc
Confidence 46799999984 678899999998899888887653
No 391
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=61.04 E-value=15 Score=31.85 Aligned_cols=52 Identities=21% Similarity=0.208 Sum_probs=36.0
Q ss_pred cccCCHHHHHHHH-HHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecC
Q psy7981 149 FIPCTPNGVLELI-KRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHS 202 (216)
Q Consensus 149 ~~PcTa~av~~lL-~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs 202 (216)
.+||.....+..+ +..++ -.|.+|+|+|. .-||.-...++...|| +|+..-+
T Consensus 175 ~l~~~~~ta~~~l~~~~~~-~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~ 228 (376)
T 1e3i_A 175 LIGCGFSSGYGAAINTAKV-TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDI 228 (376)
T ss_dssp GGGTHHHHHHHHHHTTSCC-CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS
T ss_pred hhccHHHHHHHHHHHhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Confidence 4566444334333 33333 36999999995 6789999999988999 7877654
No 392
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=60.79 E-value=5.3 Score=32.24 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=28.1
Q ss_pred CeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 171 TNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 171 k~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
++|.||| ...+|..++..|.+.|..|+++..+++
T Consensus 24 mkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 6899999 566799999999999999999444444
No 393
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=60.79 E-value=3.8 Score=36.12 Aligned_cols=36 Identities=11% Similarity=0.085 Sum_probs=30.9
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.||+|+|||-+. +|.-+|..|.+.|..||+++....
T Consensus 145 ~~~~vvVIGgG~-~g~E~A~~l~~~g~~Vtvv~~~~~ 180 (385)
T 3klj_A 145 NKGKAFIIGGGI-LGIELAQAIIDSGTPASIGIILEY 180 (385)
T ss_dssp HHSCEEEECCSH-HHHHHHHHHHHHTCCEEEECSSSS
T ss_pred cCCeEEEECCCH-HHHHHHHHHHhCCCeEEEEEcCCc
Confidence 389999999665 599999999999999999987653
No 394
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=60.74 E-value=35 Score=26.97 Aligned_cols=89 Identities=16% Similarity=0.180 Sum_probs=56.6
Q ss_pred CCCceEEEEEeCCC-----------cchHHHHHHHHHHHHHcCcceEEEe-CCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 39 DFEPGLAIVQVGGR-----------EDSNVYIRMKMKAAKEIGIDAQHVK-LPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 39 ~~~P~LaiI~vg~~-----------~as~~Yv~~k~k~a~~~Gi~~~~~~-l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
-++|+.+||.+||. .++..|. ....+++.|++...+. +|+ +.+++.+.|+++-++...|-|+.-
T Consensus 13 ~~~~rv~IittGde~~~~~~~~G~i~Dsn~~~--L~~~l~~~G~~v~~~~iv~D--d~~~I~~al~~a~~~~~~DlVitt 88 (178)
T 2pjk_A 13 PKSLNFYVITISTSRYEKLLKKEPIVDESGDI--IKQLLIENGHKIIGYSLVPD--DKIKILKAFTDALSIDEVDVIIST 88 (178)
T ss_dssp CCCCEEEEEEECHHHHHHHHTTCCCCCHHHHH--HHHHHHHTTCEEEEEEEECS--CHHHHHHHHHHHHTCTTCCEEEEE
T ss_pred CCCCEEEEEEeCcccccccccCCeEeehHHHH--HHHHHHHCCCEEEEEEEeCC--CHHHHHHHHHHHHhcCCCCEEEEC
Confidence 46899999999961 2555553 4667888999987664 455 368899999888766567877775
Q ss_pred CCCC-CCCCCCHHHHhhhcCCCCCcccC
Q psy7981 107 MPLD-SDNDINAMLVTDSVSPEKDVDGL 133 (216)
Q Consensus 107 lPL~-~P~~id~~~i~~~I~p~KDVDG~ 133 (216)
==.. ++..+..+.+.+.+ +|.++|+
T Consensus 89 GG~s~g~~D~t~eal~~~~--~~~l~G~ 114 (178)
T 2pjk_A 89 GGTGYSPTDITVETIRKLF--DREIEGF 114 (178)
T ss_dssp SCCSSSTTCCHHHHHGGGC--SEECHHH
T ss_pred CCCCCCCCcchHHHHHHHh--cccCcch
Confidence 3221 03333334443333 4555553
No 395
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=60.70 E-value=8.6 Score=32.56 Aligned_cols=54 Identities=20% Similarity=0.207 Sum_probs=38.0
Q ss_pred CHHHHHHHHHHhCCCCCCC-eEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCCh
Q psy7981 153 TPNGVLELIKRTNVTIAGT-NAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNI 207 (216)
Q Consensus 153 Ta~av~~lL~~~~i~l~Gk-~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l 207 (216)
|+...+.-+++.++. .|. +|+|+|.|.-||.-...++...||+|+.+-+....+
T Consensus 133 ta~~~l~~~~~~~~~-~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~ 187 (328)
T 1xa0_A 133 TAALSIHRLEEHGLT-PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH 187 (328)
T ss_dssp HHHHHHHHHHHTTCC-GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH
T ss_pred HHHHHHHHHhhcCCC-CCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 444343434444443 354 799999999999999999999999988876544443
No 396
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=60.61 E-value=43 Score=26.99 Aligned_cols=65 Identities=15% Similarity=0.042 Sum_probs=42.5
Q ss_pred CCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 39 DFEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 39 ~~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
+....+++|.-. +++--..+++...+.|++.|.++...... .+.+...+.++.+. ...|+||++.
T Consensus 6 ~~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~l~-~~~vdgiI~~ 71 (285)
T 3c3k_A 6 AKTGMLLVMVSNIANPFCAAVVKGIEKTAEKNGYRILLCNTE--SDLARSRSCLTLLS-GKMVDGVITM 71 (285)
T ss_dssp -CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECT--TCHHHHHHHTHHHH-TTCCSEEEEC
T ss_pred CCCCEEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEeCC--CCHHHHHHHHHHHH-hCCCCEEEEe
Confidence 345667777643 23444455678888999999988776533 34444555666665 3579999985
No 397
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=60.54 E-value=26 Score=29.10 Aligned_cols=65 Identities=8% Similarity=0.007 Sum_probs=41.1
Q ss_pred CCCceEEEEEeCCCcchHHHHHHHHHHHHHc-CcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 39 DFEPGLAIVQVGGREDSNVYIRMKMKAAKEI-GIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 39 ~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~-Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
+....++++.-.+++-...+++...+.|++. |+++...... .+.++-.+.++.+-. ..|+||++.
T Consensus 4 ~~~~~Igvi~~~~~~~~~~~~~gi~~~a~~~~g~~l~i~~~~--~~~~~~~~~i~~l~~-~~vdgiIi~ 69 (325)
T 2x7x_A 4 TPHFRIGVAQCSDDSWRHKMNDEILREAMFYNGVSVEIRSAG--DDNSKQAEDVHYFMD-EGVDLLIIS 69 (325)
T ss_dssp --CCEEEEEESCCSHHHHHHHHHHHHHHTTSSSCEEEEEECT--TCHHHHHHHHHHHHH-TTCSEEEEC
T ss_pred CCCeEEEEEecCCCHHHHHHHHHHHHHHHHcCCcEEEEeCCC--CCHHHHHHHHHHHHH-cCCCEEEEe
Confidence 3456777776543333334556777888888 9988776543 344555566666653 579999986
No 398
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=60.47 E-value=31 Score=28.03 Aligned_cols=66 Identities=11% Similarity=-0.047 Sum_probs=41.7
Q ss_pred CCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeC
Q psy7981 39 DFEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQM 107 (216)
Q Consensus 39 ~~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvql 107 (216)
+....+++|.-. +++--..+++...++|++.|.++...... .+.++..+.++.+.. ..|+||++.-
T Consensus 14 ~~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~--~~~~~~~~~~~~l~~-~~vdgiIi~~ 80 (289)
T 2fep_A 14 KKTTTVGVIIPDISSIFYSELARGIEDIATMYKYNIILSNSD--QNMEKELHLLNTMLG-KQVDGIVFMG 80 (289)
T ss_dssp --CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECT--TCHHHHHHHHHHHHH-TTCSEEEECC
T ss_pred CCCCeEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEeCC--CCHHHHHHHHHHHHh-CCCCEEEEec
Confidence 344566666643 23444455678889999999988766433 344555566666653 4799999863
No 399
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=60.38 E-value=38 Score=27.29 Aligned_cols=63 Identities=14% Similarity=0.087 Sum_probs=46.2
Q ss_pred CCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEE
Q psy7981 40 FEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIV 105 (216)
Q Consensus 40 ~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlv 105 (216)
.+|+.+||.-+ + ++.-+.+.-.+.++++|+.|+.......-+.+++.+.+++..++ .+.-||.
T Consensus 6 ~~~~V~IimgS-~-SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~-g~~ViIa 68 (174)
T 3lp6_A 6 ERPRVGVIMGS-D-SDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAAR-GLEVIIA 68 (174)
T ss_dssp CCCSEEEEESC-G-GGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHH-TCCEEEE
T ss_pred CCCeEEEEECc-H-HhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHHhC-CCCEEEE
Confidence 45766665444 3 34555667778999999999999999999999999999887643 3344444
No 400
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=60.38 E-value=50 Score=25.58 Aligned_cols=63 Identities=13% Similarity=0.097 Sum_probs=45.1
Q ss_pred CCceEEEEEeCCC----cchHHHHHHHHHHHHHcCcceEEEe-CCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 40 FEPGLAIVQVGGR----EDSNVYIRMKMKAAKEIGIDAQHVK-LPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 40 ~~P~LaiI~vg~~----~as~~Yv~~k~k~a~~~Gi~~~~~~-l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
.+|+.+||.+|+. .++..|. .....++.|++...+. .|+ +.+++.+.|+++-++.+.|-|+..
T Consensus 12 ~~~rv~Ii~tGdElg~i~Dsn~~~--l~~~L~~~G~~v~~~~iv~D--d~~~i~~~l~~~~~~~~~DlVitt 79 (169)
T 1y5e_A 12 KEVRCKIVTISDTRTEETDKSGQL--LHELLKEAGHKVTSYEIVKD--DKESIQQAVLAGYHKEDVDVVLTN 79 (169)
T ss_dssp CCCEEEEEEECSSCCTTTCHHHHH--HHHHHHHHTCEEEEEEEECS--SHHHHHHHHHHHHTCTTCSEEEEE
T ss_pred cCCEEEEEEEcCccCeeccChHHH--HHHHHHHCCCeEeEEEEeCC--CHHHHHHHHHHHHhcCCCCEEEEc
Confidence 4699999999975 2444443 4556778899876544 454 468899999988775567877775
No 401
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=60.24 E-value=11 Score=33.46 Aligned_cols=35 Identities=17% Similarity=0.179 Sum_probs=30.8
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.+++|+|||-+ .+|.-+|..|.+.|..||+++...
T Consensus 169 ~~~~vvViGgG-~~g~e~A~~l~~~g~~Vtlv~~~~ 203 (455)
T 1ebd_A 169 VPKSLVVIGGG-YIGIELGTAYANFGTKVTILEGAG 203 (455)
T ss_dssp CCSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCC
Confidence 57999999966 569999999999999999998754
No 402
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=60.00 E-value=8.2 Score=37.08 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=33.0
Q ss_pred CCCCCeEEEec-CCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 167 TIAGTNAVVLG-RSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViG-rS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
...|++|+||| -+..+|.-+|..|.+.|+.||+++...
T Consensus 525 ~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 525 KKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 45799999999 356789999999999999999998765
No 403
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=59.92 E-value=8.7 Score=34.08 Aligned_cols=36 Identities=22% Similarity=0.280 Sum_probs=31.2
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.+++|+|||-+ .+|--+|..|.+.|..||+++....
T Consensus 148 ~~~~vvViGgG-~~g~E~A~~l~~~G~~Vtlv~~~~~ 183 (431)
T 1q1r_A 148 ADNRLVVIGGG-YIGLEVAATAIKANMHVTLLDTAAR 183 (431)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCeEEEECCC-HHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 58999999965 5699999999999999999987543
No 404
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=59.86 E-value=53 Score=26.02 Aligned_cols=51 Identities=12% Similarity=0.064 Sum_probs=40.4
Q ss_pred EEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcC
Q psy7981 45 AIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNE 96 (216)
Q Consensus 45 aiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~ 96 (216)
+.|..|.+. +.-+.+.-.+.++++|++|+.......-+.+++.+..++..+
T Consensus 2 V~Iimgs~S-D~~v~~~a~~~l~~~gi~~dv~V~saHR~p~~~~~~~~~a~~ 52 (157)
T 2ywx_A 2 ICIIMGSES-DLKIAEKAVNILKEFGVEFEVRVASAHRTPELVEEIVKNSKA 52 (157)
T ss_dssp EEEEESSGG-GHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHCCC
T ss_pred EEEEEccHH-HHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHhcCC
Confidence 456666444 445556677889999999999999999999999999987755
No 405
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=59.63 E-value=10 Score=35.04 Aligned_cols=35 Identities=31% Similarity=0.242 Sum_probs=30.2
Q ss_pred CCeEEEecCCCcccHHHHHHhhhC-CC-EEEEecCCCC
Q psy7981 170 GTNAVVLGRSKIVGTPAAELLKWK-HA-TVTVCHSKTK 205 (216)
Q Consensus 170 Gk~vvViGrS~~VG~Pla~lL~~~-~A-TVtichs~T~ 205 (216)
-++|.|||-+ .+|.|+|..|.+. |. .|+++.....
T Consensus 18 ~mkIaVIGlG-~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMG-YVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCS-TTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcC-HHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 3689999976 5699999999999 99 9999987554
No 406
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=59.59 E-value=8.7 Score=43.37 Aligned_cols=40 Identities=28% Similarity=0.145 Sum_probs=36.1
Q ss_pred CCCCCeEEEecCCCc-ccHHHHHHhhhCCCEEEEecCCCCC
Q psy7981 167 TIAGTNAVVLGRSKI-VGTPAAELLKWKHATVTVCHSKTKN 206 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~-VG~Pla~lL~~~~ATVtichs~T~~ 206 (216)
.++||.|+|-|-|.= +|+-++..|.++||+|.++.+....
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~ 2173 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDD 2173 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSH
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 489999999999998 9999999999999999999776543
No 407
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=59.36 E-value=8.4 Score=31.94 Aligned_cols=36 Identities=14% Similarity=0.177 Sum_probs=30.2
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.+.|++|+|||-+. .|.-+|..|.+.+ .||+++...
T Consensus 160 ~~~~~~v~VvG~G~-~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 160 PFAGMRVAIIGGGN-SGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp GGTTSEEEEECCSH-HHHHHHHHHTTTS-EEEEECSSC
T ss_pred hcCCCEEEEECCCc-CHHHHHHHHHhhC-CEEEEECCC
Confidence 45799999999765 5999999999887 699998764
No 408
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=59.27 E-value=41 Score=27.33 Aligned_cols=62 Identities=16% Similarity=0.170 Sum_probs=44.7
Q ss_pred CceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEE
Q psy7981 41 EPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIV 105 (216)
Q Consensus 41 ~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlv 105 (216)
.|+.+ |..|.+ .+.-+.+.-.+.++++||.|+.......-+.+++.+..+++.++ .+.-||.
T Consensus 21 ~~~V~-IimGS~-SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~-g~~ViIa 82 (182)
T 1u11_A 21 APVVG-IIMGSQ-SDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAER-GLNVIIA 82 (182)
T ss_dssp CCSEE-EEESSG-GGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTT-TCCEEEE
T ss_pred CCEEE-EEECcH-HHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhC-CCcEEEE
Confidence 45544 455533 44455566778899999999999999999999999999887643 2334444
No 409
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=59.17 E-value=8.6 Score=34.69 Aligned_cols=37 Identities=19% Similarity=0.192 Sum_probs=31.9
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
..+|+|+|||-+. +|.-+|..|.+.|..||+++....
T Consensus 192 ~~~~~vvVIGgG~-ig~E~A~~l~~~g~~Vtlv~~~~~ 228 (490)
T 2bc0_A 192 KDIKRVAVVGAGY-IGVELAEAFQRKGKEVVLIDVVDT 228 (490)
T ss_dssp TTCCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCceEEEECCCH-HHHHHHHHHHHCCCeEEEEEcccc
Confidence 4689999999765 699999999999999999987643
No 410
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=59.02 E-value=4.2 Score=35.97 Aligned_cols=35 Identities=9% Similarity=0.024 Sum_probs=30.5
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhC--CCEEEEecCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWK--HATVTVCHSKT 204 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~--~ATVtichs~T 204 (216)
.||+|+|||-+.+ |--++..|.+. ++.||+++...
T Consensus 226 ~~~~vvVvGgG~s-g~e~a~~l~~~~~~~~Vt~v~r~~ 262 (463)
T 3s5w_A 226 KPMKIAIIGGGQS-AAEAFIDLNDSYPSVQADMILRAS 262 (463)
T ss_dssp -CEEEEEECCSHH-HHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCCeEEEECCCHh-HHHHHHHHHhcCCCCeEEEEEeCC
Confidence 6999999998765 99999999988 99999998765
No 411
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=58.94 E-value=5.5 Score=33.70 Aligned_cols=82 Identities=18% Similarity=0.205 Sum_probs=47.4
Q ss_pred HHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCCHHHHhhhcCCCCCcccCC--ccchhH
Q psy7981 63 MKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDINAMLVTDSVSPEKDVDGLN--TINEGR 140 (216)
Q Consensus 63 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id~~~i~~~I~p~KDVDG~~--~~n~G~ 140 (216)
.+.+.+.|.++..++.....+..+.++.|++++... |+. ..|= .-- +.+ +.+-+ ++|-+- ..|-|
T Consensus 102 i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~---Gva-lnp~----Tp~-e~l-~~~l~--~vD~VlvMsV~PG- 168 (246)
T 3inp_A 102 IESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQA---GLA-LNPA----TGI-DCL-KYVES--NIDRVLIMSVNPG- 168 (246)
T ss_dssp HHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEE---EEE-ECTT----CCS-GGG-TTTGG--GCSEEEEECSCTT-
T ss_pred HHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeE---EEE-ecCC----CCH-HHH-HHHHh--cCCEEEEeeecCC-
Confidence 355778999998888766666778888888776542 443 3332 211 222 22322 456442 34555
Q ss_pred hhcCCCCCcccCCHHHHHHH
Q psy7981 141 VAIGDMNGFIPCTPNGVLEL 160 (216)
Q Consensus 141 l~~~~~~~~~PcTa~av~~l 160 (216)
|-| +.|+|++..=+-++
T Consensus 169 -fgG--Q~fi~~~l~KI~~l 185 (246)
T 3inp_A 169 -FGG--QKFIPAMLDKAKEI 185 (246)
T ss_dssp -C----CCCCTTHHHHHHHH
T ss_pred -CCC--cccchHHHHHHHHH
Confidence 334 57999887555443
No 412
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=58.91 E-value=33 Score=27.53 Aligned_cols=63 Identities=16% Similarity=0.196 Sum_probs=41.6
Q ss_pred CceEEEEEeCC-CcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 41 EPGLAIVQVGG-REDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 41 ~P~LaiI~vg~-~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
..++++|.-+- ++--...++...++|++.|+++....... +.++-.+.++.+.. .+|+||++.
T Consensus 5 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~--~~~~~~~~~~~l~~-~~vdgiIi~ 68 (291)
T 3l49_A 5 GKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAGR--NDQTQVSQIQTLIA-QKPDAIIEQ 68 (291)
T ss_dssp TCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHHHHHH-HCCSEEEEE
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCCC--CHHHHHHHHHHHHH-cCCCEEEEe
Confidence 34666666542 33334557888999999999988876543 34444555555543 369999986
No 413
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=58.80 E-value=8.9 Score=33.57 Aligned_cols=50 Identities=26% Similarity=0.325 Sum_probs=37.5
Q ss_pred CHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 153 TPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 153 Ta~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
|...+..+-+...- .|++|+|||-+ .+|.-++..|.+.+..||+.+....
T Consensus 137 ~~~d~~~l~~~~~~--~~~~vvViGgG-~~g~e~A~~l~~~g~~Vtvv~~~~~ 186 (415)
T 3lxd_A 137 TKEDADRLMAELDA--GAKNAVVIGGG-YIGLEAAAVLTKFGVNVTLLEALPR 186 (415)
T ss_dssp SHHHHHHHHHHHHT--TCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CHHHHHHHHHHhhh--cCCeEEEECCC-HHHHHHHHHHHhcCCeEEEEecCCc
Confidence 55555555443321 38999999965 5699999999999999999987654
No 414
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=58.70 E-value=33 Score=28.14 Aligned_cols=62 Identities=11% Similarity=0.010 Sum_probs=41.9
Q ss_pred ceEEEEEeCC-CcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 42 PGLAIVQVGG-REDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 42 P~LaiI~vg~-~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
.++++|.-.- ++--....+...++|++.|+++....- +.+.++-.+.++.+-. ..|+||++.
T Consensus 4 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~--~~~~~~~~~~i~~~~~-~~vdgiIi~ 66 (330)
T 3uug_A 4 GSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYA--DDDIPNQLSQIENMVT-KGVKVLVIA 66 (330)
T ss_dssp CEEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEEC--TTCHHHHHHHHHHHHH-HTCSEEEEC
T ss_pred cEEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeC--CCCHHHHHHHHHHHHH-cCCCEEEEE
Confidence 4566666543 444455678888999999999887763 3344555566666544 369999986
No 415
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=58.46 E-value=14 Score=31.97 Aligned_cols=52 Identities=15% Similarity=0.105 Sum_probs=35.5
Q ss_pred cccCCHHHHHHHH-HHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecC
Q psy7981 149 FIPCTPNGVLELI-KRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHS 202 (216)
Q Consensus 149 ~~PcTa~av~~lL-~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs 202 (216)
.+||.....+..+ +..++ -.|.+|+|+|. .-||.-...++...|| +|+..-+
T Consensus 170 ~l~~~~~ta~~~l~~~~~~-~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~ 223 (373)
T 2fzw_A 170 LLGCGISTGYGAAVNTAKL-EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDI 223 (373)
T ss_dssp GGGTHHHHHHHHHHTTTCC-CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS
T ss_pred hhccHHHHHHHHHHhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Confidence 4565433333333 33333 36999999995 6889999999888899 7877654
No 416
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=57.95 E-value=48 Score=26.59 Aligned_cols=66 Identities=11% Similarity=0.050 Sum_probs=43.2
Q ss_pred CCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcc-eEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeC
Q psy7981 39 DFEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGID-AQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQM 107 (216)
Q Consensus 39 ~~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~-~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvql 107 (216)
+....+++|.-. +++--..+++...+.|++.|.+ ........ +.+.-.+.++.+.. ..|+||++.-
T Consensus 8 ~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~--~~~~~~~~~~~l~~-~~vdgiIi~~ 75 (277)
T 3hs3_A 8 KKSKMIGIIIPDLNNRFYAQIIDGIQEVIQKEGYTALISFSTNS--DVKKYQNAIINFEN-NNVDGIITSA 75 (277)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECSSC--CHHHHHHHHHHHHH-TTCSEEEEEC
T ss_pred CCCCEEEEEeCCCCChhHHHHHHHHHHHHHHCCCCEEEEEeCCC--ChHHHHHHHHHHHh-CCCCEEEEcc
Confidence 455667777654 2444556678889999999998 66654433 44444555555543 3799999974
No 417
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=57.95 E-value=26 Score=27.57 Aligned_cols=59 Identities=10% Similarity=0.175 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCC--HHHHhhhc
Q psy7981 57 VYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDIN--AMLVTDSV 124 (216)
Q Consensus 57 ~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id--~~~i~~~I 124 (216)
...+.-.+.|++.|++++.+. +-.|-|+++.|.+. .+..++||++- |..+. .-.+.+++
T Consensus 28 di~~~l~~~a~~~g~~v~~~Q---SN~EgeLId~Ih~a-~~~~~dgiIIN-----pgA~THtSvAlrDAl 88 (149)
T 2uyg_A 28 ELEALCEAWGAELGLGVVFRQ---TNYEGQLIEWVQQA-HQEGFLAIVLN-----PGALTHYSYALLDAI 88 (149)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE---CSCHHHHHHHHHHT-TTTTCSEEEEE-----CGGGGGTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEe---eCCHHHHHHHHHHh-ccCCeeEEEEc-----cchhccccHHHHHHH
Confidence 345667788999999887664 34688999999987 34449999986 54442 23455555
No 418
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=57.94 E-value=13 Score=33.13 Aligned_cols=36 Identities=14% Similarity=0.108 Sum_probs=31.7
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
-+.||+|.|+|++.+ |+.++.-+.+.|..|.++...
T Consensus 32 ~~~~~~IlIlG~G~l-g~~~~~aa~~lG~~v~v~d~~ 67 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQL-GRMFCFAAQSMGYRVAVLDPD 67 (419)
T ss_dssp CCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCC
Confidence 358999999999975 999999999999999998754
No 419
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=57.94 E-value=12 Score=33.80 Aligned_cols=39 Identities=15% Similarity=0.143 Sum_probs=32.9
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.+-.+++|+|||.+. +|.-+|..|.+.|..||+++....
T Consensus 170 ~~~~~k~vvViGgG~-ig~E~A~~l~~~g~~Vtlv~~~~~ 208 (492)
T 3ic9_A 170 LNDLPKSVAVFGPGV-IGLELGQALSRLGVIVKVFGRSGS 208 (492)
T ss_dssp CSSCCSEEEEESSCH-HHHHHHHHHHHTTCEEEEECCTTC
T ss_pred hhhcCCeEEEECCCH-HHHHHHHHHHHcCCeEEEEEECCc
Confidence 444589999999665 599999999999999999987653
No 420
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=57.94 E-value=13 Score=33.01 Aligned_cols=35 Identities=17% Similarity=0.180 Sum_probs=30.9
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.+++|+|||-+ .+|--+|..|.+.|..||+++...
T Consensus 170 ~~~~vvViGgG-~~g~E~A~~l~~~g~~Vtlv~~~~ 204 (464)
T 2a8x_A 170 LPKSIIIAGAG-AIGMEFGYVLKNYGVDVTIVEFLP 204 (464)
T ss_dssp CCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCeEEEECCc-HHHHHHHHHHHHcCCeEEEEEcCC
Confidence 58999999966 569999999999999999998764
No 421
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=57.69 E-value=9.4 Score=34.16 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=30.8
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.+++++|||-+ .+|.-+|..|.+.|..||+++...
T Consensus 168 ~~~~vvViGgG-~~g~e~A~~l~~~g~~Vtlv~~~~ 202 (464)
T 2eq6_A 168 LPKRLLVIGGG-AVGLELGQVYRRLGAEVTLIEYMP 202 (464)
T ss_dssp CCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEEcCC
Confidence 47999999966 569999999999999999998764
No 422
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=57.53 E-value=25 Score=27.86 Aligned_cols=56 Identities=13% Similarity=0.245 Sum_probs=40.7
Q ss_pred HHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCC--HHHHhhhc
Q psy7981 59 IRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDIN--AMLVTDSV 124 (216)
Q Consensus 59 v~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id--~~~i~~~I 124 (216)
.+.-.+.|++.|++++.+. +=.|-|+++.|.+.- .+++||++- |..+. .-.+.+++
T Consensus 38 ~~~l~~~a~~~g~~~~~~Q---SN~EgeLId~Ih~a~--~~~dgiiIN-----pgA~THtSvAlrDAl 95 (153)
T 3lwz_A 38 VSQLEIQAQGMDVALSHLQ---SNAEHALIDSIHQAR--GNTDFILIN-----PAAFTHTSVALRDAL 95 (153)
T ss_dssp HHHHHHHHHHTTEEEEEEE---CSCHHHHHHHHHHHT--TTCSEEEEE-----CGGGGGTCHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEe---cCCHHHHHHHHHHhh--hcCceEEEc-----cccceechHHHHHHH
Confidence 5667778889999887664 336899999999973 459999996 55553 23555555
No 423
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=57.52 E-value=14 Score=31.87 Aligned_cols=33 Identities=24% Similarity=0.154 Sum_probs=27.9
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHS 202 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs 202 (216)
.|.+|+|+|. .-||.-...++...|| +|+.+-+
T Consensus 191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~ 224 (373)
T 1p0f_A 191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGT 224 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence 6999999995 6789999988888899 7877654
No 424
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=57.44 E-value=14 Score=33.61 Aligned_cols=36 Identities=14% Similarity=0.075 Sum_probs=31.1
Q ss_pred CCeEEEecCCCcccHH-HHHHhhhCCCEEEEecCCCCC
Q psy7981 170 GTNAVVLGRSKIVGTP-AAELLKWKHATVTVCHSKTKN 206 (216)
Q Consensus 170 Gk~vvViGrS~~VG~P-la~lL~~~~ATVtichs~T~~ 206 (216)
.|+|.|||-+.. |.. +|.+|.++|+.|+.+..+...
T Consensus 19 ~~~v~viGiG~s-G~s~~A~~l~~~G~~V~~~D~~~~~ 55 (491)
T 2f00_A 19 VRHIHFVGIGGA-GMGGIAEVLANEGYQISGSDLAPNP 55 (491)
T ss_dssp CCEEEEETTTST-THHHHHHHHHHTTCEEEEECSSCCH
T ss_pred CCEEEEEEcCHH-HHHHHHHHHHhCCCeEEEECCCCCH
Confidence 578999999976 885 999999999999999987643
No 425
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=57.44 E-value=6.6 Score=34.84 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=29.5
Q ss_pred CCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 170 GTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 170 Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.++|+|||-+. +|.-+|..|.++|..|+++-..+
T Consensus 22 ~~~ViIVGaGp-aGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGT-AGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHH-HHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcH-HHHHHHHHHHHCCCeEEEEcCCC
Confidence 36899999775 59999999999999999998765
No 426
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=57.02 E-value=26 Score=27.41 Aligned_cols=58 Identities=19% Similarity=0.289 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCC--HHHHhhhcC
Q psy7981 58 YIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDIN--AMLVTDSVS 125 (216)
Q Consensus 58 Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id--~~~i~~~I~ 125 (216)
..+.-.+.|++.|++++.+. +-.|-|+++.|.+.-. +++||++- |..+. .-.+.+++.
T Consensus 30 i~~~l~~~a~~~g~~~~~~Q---SN~EgeLid~Ih~a~~--~~dgiiiN-----pgA~THtSvAlrDAl~ 89 (143)
T 1gqo_A 30 IETDLFQFAEALHIQLTFFQ---SNHEGDLIDAIHEAEE--QYSGIVLN-----PGALSHYSYAIRDAVS 89 (143)
T ss_dssp HHHHHHHHHHHHTCEEEEEE---CSCHHHHHHHHHHHTT--TCSEEEEE-----CGGGGGTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEe---eCCHHHHHHHHHHhhh--cCcEEEEc-----cchhccccHHHHHHHH
Confidence 45666778899999877664 4468899999999854 49999986 55443 234555553
No 427
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=56.96 E-value=9.8 Score=32.91 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=30.8
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.+++++|||-+. +|.-+|..|.+.|..||+++...
T Consensus 144 ~~~~v~ViGgG~-~g~e~A~~l~~~g~~Vtlv~~~~ 178 (384)
T 2v3a_A 144 GKRRVLLLGAGL-IGCEFANDLSSGGYQLDVVAPCE 178 (384)
T ss_dssp TCCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCeEEEECCCH-HHHHHHHHHHhCCCeEEEEecCc
Confidence 489999999765 59999999999999999998764
No 428
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=56.84 E-value=3.4 Score=39.53 Aligned_cols=42 Identities=19% Similarity=0.240 Sum_probs=34.5
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCCCCChHH
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSKTKNIQD 209 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~T~~l~~ 209 (216)
.+++++|+|||.+.+ |.+++..|...|. ++|+++..+-++..
T Consensus 324 kL~~~kVLIVGaGGL-Gs~va~~La~aGVG~ItLvD~D~Ve~SN 366 (598)
T 3vh1_A 324 IIKNTKVLLLGAGTL-GCYVSRALIAWGVRKITFVDNGTVSYSN 366 (598)
T ss_dssp HHHTCEEEEECCSHH-HHHHHHHHHTTTCCEEEEECCSBCCTTS
T ss_pred HHhCCeEEEECCCHH-HHHHHHHHHHcCCCEEEEECCCcccccc
Confidence 578999999999986 9999999999886 79999766544433
No 429
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=56.77 E-value=76 Score=25.77 Aligned_cols=58 Identities=16% Similarity=0.254 Sum_probs=39.8
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEE
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIV 105 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlv 105 (216)
++++|.-..+..+..-.+.-.+++++.|+++....... .++..+.+++|-. ++++|+.
T Consensus 135 ~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~~~~~~~---~~~~~~~~~~l~~--~~dai~~ 192 (295)
T 3lft_A 135 TIGALYSSSEDNSKTQVEEFKAYAEKAGLTVETFAVPS---TNEIASTVTVMTS--KVDAIWV 192 (295)
T ss_dssp EEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEESS---GGGHHHHHHHHTT--TCSEEEE
T ss_pred EEEEEeCCCCcchHHHHHHHHHHHHHcCCEEEEEecCC---HHHHHHHHHHHHh--cCCEEEE
Confidence 67777654443444455666788999999987655432 3567777888763 6888887
No 430
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=56.73 E-value=13 Score=33.07 Aligned_cols=36 Identities=14% Similarity=0.210 Sum_probs=31.3
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.+++++|||-+. +|--+|..|.+.|..||+++....
T Consensus 182 ~~~~vvViGgG~-~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 182 IPKRLTIIGGGI-IGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp CCSEEEEECCSH-HHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCceEEEECCCH-HHHHHHHHHHHcCCEEEEEEeCCc
Confidence 489999999665 599999999999999999987653
No 431
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=56.70 E-value=28 Score=25.56 Aligned_cols=70 Identities=14% Similarity=0.224 Sum_probs=43.1
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHHHhcC-CCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHH
Q psy7981 10 AQILSGTAVSGDIREGLKERVKKLKERL-PDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELL 88 (216)
Q Consensus 10 a~il~Gk~vA~~i~~~ik~~v~~l~~~~-~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 88 (216)
..+|.|.. ..--|+++++.++.+--.- ..+.-+.-.+.+|+++. .+|.+.|+++||... ++++|+
T Consensus 37 ~~v~TG~l-~~~~R~e~~~~i~~~Gg~v~~sVSkkTd~LV~G~~~g-----~sK~~kA~~lgI~Ii--------~E~~f~ 102 (109)
T 2k6g_A 37 IFVITGVL-ESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSG-----QSKSDKAAALGTKII--------DEDGLL 102 (109)
T ss_dssp EEEEESBC-SSCCHHHHHHHHHHTTCEEESSCCTTCCEEEECBCCC-----HHHHHHHHHHTCEEE--------CHHHHH
T ss_pred EEEEeeeC-CCCCHHHHHHHHHHcCCEeeCcccCCceEEEECCCCC-----hHHHHHHHHcCCeEE--------eHHHHH
Confidence 34566642 1112566666665542100 12445677888898775 258889999998643 578898
Q ss_pred HHHHH
Q psy7981 89 SRLKK 93 (216)
Q Consensus 89 ~~I~~ 93 (216)
+.|+.
T Consensus 103 ~ll~~ 107 (109)
T 2k6g_A 103 NLIRN 107 (109)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88865
No 432
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=56.61 E-value=4.7 Score=35.62 Aligned_cols=44 Identities=11% Similarity=0.269 Sum_probs=34.9
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCCCCChHHHHh
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSKTKNIQDVVK 212 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~T~~l~~~~k 212 (216)
+++++|+|||-+. +|.+++..|...|. ++|+++..+-+....-|
T Consensus 116 L~~~~VlvvG~Gg-lGs~va~~La~aGvg~i~lvD~D~Ve~sNL~R 160 (353)
T 3h5n_A 116 LKNAKVVILGCGG-IGNHVSVILATSGIGEIILIDNDQIENTNLTR 160 (353)
T ss_dssp HHTCEEEEECCSH-HHHHHHHHHHHHTCSEEEEEECCBCCGGGGGT
T ss_pred HhCCeEEEECCCH-HHHHHHHHHHhCCCCeEEEECCCcCccccccc
Confidence 4689999999987 59999999998875 79999877655444433
No 433
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=56.32 E-value=12 Score=31.51 Aligned_cols=50 Identities=12% Similarity=0.240 Sum_probs=38.1
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEec
Q psy7981 150 IPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCH 201 (216)
Q Consensus 150 ~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtich 201 (216)
+||+..-.+..|+..++ -.|.+|+|.|. .-||.-...++...||.|+..-
T Consensus 124 l~~~~~ta~~al~~~~~-~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~ 173 (315)
T 3goh_A 124 LPCPLLTAWQAFEKIPL-TKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS 173 (315)
T ss_dssp SHHHHHHHHHHHTTSCC-CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC
T ss_pred CccHHHHHHHHHhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE
Confidence 55555555555544343 37999999999 8889999999988999998876
No 434
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=56.22 E-value=8.9 Score=34.15 Aligned_cols=35 Identities=20% Similarity=0.172 Sum_probs=31.1
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
-.|++|+|.|.|.-||.-...++...||.|.++-.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~ 253 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVS 253 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 36999999999899999999999999999887753
No 435
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=56.11 E-value=12 Score=31.58 Aligned_cols=52 Identities=23% Similarity=0.240 Sum_probs=38.8
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEec
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCH 201 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtich 201 (216)
.+||.....+..|+..++ -.|.+|+|+|.+.-||.-...++...||+|+..-
T Consensus 133 ~l~~~~~ta~~al~~~~~-~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~ 184 (321)
T 3tqh_A 133 SLPTAGLTALQALNQAEV-KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA 184 (321)
T ss_dssp HSHHHHHHHHHHHHHTTC-CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhhhHHHHHHHHHHhcCC-CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe
Confidence 446544444455554444 4799999999888899999999999999988764
No 436
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=56.08 E-value=26 Score=27.72 Aligned_cols=49 Identities=14% Similarity=0.191 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCCC
Q psy7981 58 YIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMPLDSDNDIN 116 (216)
Q Consensus 58 Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPL~~P~~id 116 (216)
+.+.-.+.|++.|++++.+. +-.|-|+++.|.+.-. +++||++- |..+.
T Consensus 31 i~~~l~~~a~~~g~~l~~~Q---SN~EGeLId~Ih~a~~--~~dgiIIN-----pgA~T 79 (154)
T 1uqr_A 31 IEQHLQQSAQAQGYELDYFQ---ANGEESLINRIHQAFQ--NTDFIIIN-----PGAFT 79 (154)
T ss_dssp HHHHHHHHHHHTTCEEEEEE---CSSHHHHHHHHHHTTT--TCCEEEEE-----CTTHH
T ss_pred HHHHHHHHHHHCCCEEEEEe---eCCHHHHHHHHHHhhh--cCcEEEEC-----cchhc
Confidence 45667778999999877664 4468899999998844 49999986 55553
No 437
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=55.66 E-value=7.2 Score=33.88 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=31.2
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.|++++|||-+. +|--+|..|.+.|..||+.+....
T Consensus 142 ~~~~vvViGgG~-~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 142 NSGEAIIIGGGF-IGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp HHSEEEEEECSH-HHHHHHHHHHHTTCEEEEECSSSC
T ss_pred cCCcEEEECCCH-HHHHHHHHHHhCCCEEEEEeCCCe
Confidence 369999999765 699999999999999999987654
No 438
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=55.56 E-value=49 Score=27.73 Aligned_cols=64 Identities=11% Similarity=0.061 Sum_probs=40.4
Q ss_pred CceEEEEE-eCCC---cchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCC
Q psy7981 41 EPGLAIVQ-VGGR---EDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMP 108 (216)
Q Consensus 41 ~P~LaiI~-vg~~---~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlP 108 (216)
+.++++|. +|+- +=.....+...++|++.|+++....-.++ ++....++.|-+ ..++||++.-+
T Consensus 4 ~~~Ig~v~~~g~~~d~~f~~~~~~Gi~~~~~~~g~~~~~~~~~~~---~~~~~~l~~l~~-~~~dgIi~~~~ 71 (318)
T 2fqx_A 4 DFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNAKCKYVTASTD---AEYVPSLSAFAD-ENMGLVVACGS 71 (318)
T ss_dssp CCEEEEEESSSCTTSSSHHHHHHHHHHHHHHHTTCEEEEEECCSG---GGHHHHHHHHHH-TTCSEEEEEST
T ss_pred CcEEEEEEcCCCCCCccHHHHHHHHHHHHHHHhCCeEEEEeCCCH---HHHHHHHHHHHH-cCCCEEEECCh
Confidence 35677777 3532 22334457788899999998877654332 223455666643 46999998644
No 439
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=55.50 E-value=13 Score=28.19 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=28.2
Q ss_pred CCeEEEecCC---CcccHHHHHHhhhCCCEEEEecCC
Q psy7981 170 GTNAVVLGRS---KIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 170 Gk~vvViGrS---~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
-++|+|||-| ...|..++..|.+.|.+|.-.|-+
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~ 49 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR 49 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCC
Confidence 4789999999 467779999999999988887654
No 440
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=55.39 E-value=10 Score=33.02 Aligned_cols=49 Identities=22% Similarity=0.177 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 153 TPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 153 Ta~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
|...+..+-+.. ..|++++|||-+. +|.-++..|.+.+..||+++....
T Consensus 128 ~~~d~~~l~~~~---~~~~~vvViGgG~-~g~e~A~~l~~~g~~Vtvv~~~~~ 176 (404)
T 3fg2_P 128 TLDESEVLRQRM---PDKKHVVVIGAGF-IGLEFAATARAKGLEVDVVELAPR 176 (404)
T ss_dssp SHHHHHHHHHHG---GGCSEEEEECCSH-HHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CHHHHHHHHHHh---hcCCeEEEECCCH-HHHHHHHHHHhCCCEEEEEeCCCc
Confidence 444444444432 2589999999764 699999999999999999987653
No 441
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=55.16 E-value=9.5 Score=32.13 Aligned_cols=37 Identities=22% Similarity=0.188 Sum_probs=29.6
Q ss_pred CeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCCChH
Q psy7981 171 TNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTKNIQ 208 (216)
Q Consensus 171 k~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~~l~ 208 (216)
++|.|||- ..+|.+++..|.+.|..|+++.......+
T Consensus 31 ~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~ 67 (316)
T 2uyy_A 31 KKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTAEKCD 67 (316)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSGGGGH
T ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence 68999996 55699999999999999999876443333
No 442
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=54.79 E-value=9 Score=31.75 Aligned_cols=36 Identities=22% Similarity=0.224 Sum_probs=30.8
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..|++|+|||-+. +|--++..|.+.+..||++|...
T Consensus 153 ~~~~~v~viG~G~-~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 153 FKGKRVVTIGGGN-SGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp GBTSEEEEECCSH-HHHHHHHHHTTTBSEEEEECSSS
T ss_pred cCCCeEEEECCCH-HHHHHHHHHHhhCCcEEEEEcCC
Confidence 4689999999765 58889999999999999998753
No 443
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=54.72 E-value=12 Score=30.05 Aligned_cols=64 Identities=11% Similarity=0.075 Sum_probs=42.7
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCC--CHHHHHHHHHHhcCCCCccEEEEeCCC
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSI--TEIELLSRLKKLNEDPSVHGIIVQMPL 109 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~--~~~el~~~I~~lN~D~~V~GIlvqlPL 109 (216)
++.+|....++.+..+.+.-.+.+++.|.+++.+++.+.- ..+++.+.++++ ..-|+|+++.|+
T Consensus 3 kiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~dL~~~~~~~~~dv~~~~~~l---~~AD~iv~~~P~ 68 (192)
T 3f2v_A 3 KTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHELYAVYPQGKIDVAAEQKLI---ETHDSLVWQFPI 68 (192)
T ss_dssp CEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEEHHHHCTTCCCCHHHHHHHH---HTSSSEEEEEEC
T ss_pred EEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEEchhcCCCCchhHHHHHHHH---HhCCEEEEEcCh
Confidence 4566666667665467777788888999999998875311 012344445555 235699999998
No 444
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.58 E-value=12 Score=33.40 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=31.7
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
-.+++++|||-+. +|.-+|..|.+.|..||+++....
T Consensus 169 ~~~~~vvViGgG~-~g~e~A~~l~~~g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 169 ALPQHLVVVGGGY-IGLELGIAYRKLGAQVSVVEARER 205 (458)
T ss_dssp SCCSEEEEECCSH-HHHHHHHHHHHHTCEEEEECSSSS
T ss_pred ccCCeEEEECcCH-HHHHHHHHHHHCCCeEEEEEcCCc
Confidence 3589999999765 599999999999999999987643
No 445
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=54.53 E-value=15 Score=32.47 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=31.0
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
-.+++++|||-+ .+|--+|..|.+.|..||+++...
T Consensus 165 ~~~~~vvIiGgG-~~g~e~A~~l~~~g~~V~lv~~~~ 200 (455)
T 2yqu_A 165 EVPKRLIVVGGG-VIGLELGVVWHRLGAEVIVLEYMD 200 (455)
T ss_dssp SCCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCCeEEEECCC-HHHHHHHHHHHHcCCEEEEEecCC
Confidence 357999999976 469999999999999999998754
No 446
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=54.38 E-value=21 Score=28.93 Aligned_cols=65 Identities=5% Similarity=-0.016 Sum_probs=40.4
Q ss_pred CceEEEEEeC-----CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCC
Q psy7981 41 EPGLAIVQVG-----GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMP 108 (216)
Q Consensus 41 ~P~LaiI~vg-----~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlP 108 (216)
...+++|.-. +++--..+++...++|++.|.++.......+. ++-.+.++.+. ...|+||++.-+
T Consensus 4 s~~Ig~i~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~--~~~~~~~~~l~-~~~vdgiIi~~~ 73 (287)
T 3bbl_A 4 SFMIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNYFVLPFPFSEDR--SQIDIYRDLIR-SGNVDGFVLSSI 73 (287)
T ss_dssp CCEEEECCCCCCTTCSCCTHHHHHHHHHHHHHHTTCEEEECCCCSST--TCCHHHHHHHH-TTCCSEEEECSC
T ss_pred eeEEEEEecccccccCChhHHHHHHHHHHHHHHcCCEEEEEeCCCch--HHHHHHHHHHH-cCCCCEEEEeec
Confidence 4466666644 45555667788899999999887765433222 22233444443 346999999643
No 447
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=54.30 E-value=7.4 Score=35.72 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=31.4
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
.++.||+|+|||-+. .|.-++..|...++.||++..
T Consensus 182 ~~~~gk~V~VIG~G~-sg~e~a~~l~~~~~~vtv~~r 217 (542)
T 1w4x_A 182 VDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQR 217 (542)
T ss_dssp CCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEES
T ss_pred hccCCCEEEEECCCc-cHHHHHHHHhhcCceEEEEEc
Confidence 567899999999865 599999999999999999975
No 448
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=53.99 E-value=12 Score=33.79 Aligned_cols=38 Identities=24% Similarity=0.366 Sum_probs=30.9
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhC--------------------CC-EEEEecCCCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWK--------------------HA-TVTVCHSKTK 205 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~--------------------~A-TVtichs~T~ 205 (216)
++.|++|+|||-++ +|--+|..|.+. ++ .||+++...+
T Consensus 144 ~~~~~~vvVIG~G~-~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 144 DLSGARAVVIGNGN-VALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CCCSSEEEEECCSH-HHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred hcCCCEEEEECCCH-HHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 35899999999775 599999998874 54 8999998754
No 449
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=53.96 E-value=28 Score=29.15 Aligned_cols=56 Identities=20% Similarity=0.200 Sum_probs=30.6
Q ss_pred CCCceEEEEEeCCCcchHHH----HHHHHHHHHHcCcceEEEeCCCC--CCHHHHHHHHHHh
Q psy7981 39 DFEPGLAIVQVGGREDSNVY----IRMKMKAAKEIGIDAQHVKLPRS--ITEIELLSRLKKL 94 (216)
Q Consensus 39 ~~~P~LaiI~vg~~~as~~Y----v~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~l 94 (216)
|..+.-.....+.+.+|..| .+...+.|+.+||....+.++.. ...+++.+.++++
T Consensus 28 G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~e~l~~~l~~~ 89 (237)
T 3rjz_A 28 RFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEVEDLKRVLSGL 89 (237)
T ss_dssp TCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CHHHHHHHHTTS
T ss_pred CCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHHhc
Confidence 56554334566766555554 34567789999999999999854 2345555555554
No 450
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=53.94 E-value=41 Score=33.05 Aligned_cols=72 Identities=18% Similarity=0.196 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCC
Q psy7981 22 IREGLKERVKKLKERLPDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNED 97 (216)
Q Consensus 22 i~~~ik~~v~~l~~~~~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D 97 (216)
-.+.+++.++.+.+. .+.+|++.+-.+|.| .-..=.+......+..|+++. .++.+.+.+++.+...+-+.|
T Consensus 586 ~fe~lr~~~~~~~~~-~g~r~kVvlatvg~D-~HdiG~~iVa~~l~~~GfeVi--~lG~~v~~eeiv~aA~e~~ad 657 (762)
T 2xij_A 586 EITSAIKRVHKFMER-EGRRPRLLVAKMGQD-GHDRGAKVIATGFADLGFDVD--IGPLFQTPREVAQQAVDADVH 657 (762)
T ss_dssp HHHHHHHHHHHHHHH-HSSCCEEEEECCSSC-CCCHHHHHHHHHHHHTTCEEE--ECCTTCCHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHh-cCCCCEEEEEecCcc-hhhHHHHHHHHHHHhCCeEEe--eCCCCCCHHHHHHHHHHcCCC
Confidence 346677777766433 368899999999988 444444555677788999884 588889999999999886433
No 451
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=53.81 E-value=14 Score=25.81 Aligned_cols=36 Identities=8% Similarity=0.173 Sum_probs=30.1
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHS 202 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs 202 (216)
+..+++|+||..+.....-+..+|...|..|+.|.+
T Consensus 4 ~~~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~ 39 (130)
T 3eod_A 4 PLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAAD 39 (130)
T ss_dssp TTTTCEEEEECSCHHHHHHHHHHHHHTTCEEEEESC
T ss_pred CCCCCeEEEEeCCHHHHHHHHHHHHhCCceEEEeCC
Confidence 457889999999999999999999888888887654
No 452
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=53.62 E-value=38 Score=33.07 Aligned_cols=71 Identities=15% Similarity=0.165 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhcCCCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCC
Q psy7981 23 REGLKERVKKLKERLPDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNED 97 (216)
Q Consensus 23 ~~~ik~~v~~l~~~~~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D 97 (216)
.+.+|..++.+.+. .+.+|++.+-.+|.| .-..=.+......+..|+++ +.++.+.+.+++.+...+-+.|
T Consensus 579 fe~Lr~~~~~~~~~-~g~r~kVvlatvg~D-~HdiG~~iVa~~l~~~GfeV--i~lG~~v~~eeiv~aA~e~~ad 649 (727)
T 1req_A 579 VEEARELVEEFEQA-EGRRPRILLAKMGQD-GHDRGQKVIATAYADLGFDV--DVGPLFQTPEETARQAVEADVH 649 (727)
T ss_dssp HHHHHHHHHHHHHH-HSSCCEEEEECBTTC-CCCHHHHHHHHHHHHHTCEE--EECCTTBCHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHh-cCCCCEEEEEeCCcc-hhHHHHHHHHHHHHhCCeEE--EeCCCCCCHHHHHHHHHHcCCC
Confidence 35677777666533 268899999999988 44444455667788899988 4588889999999999886433
No 453
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=53.51 E-value=11 Score=34.80 Aligned_cols=38 Identities=24% Similarity=0.198 Sum_probs=32.2
Q ss_pred CCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 165 NVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 165 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
..+..+++|+|||-+. +|.=+|..|.+.|+.||+++..
T Consensus 281 ~~~~~~~~vvViGgG~-~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 281 SLPYFPGKTLVIGASY-VALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp TCSSCCCSEEEECCSH-HHHHHHHHHHHTTCCEEEEESS
T ss_pred hCccCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEECC
Confidence 3455688999999765 5999999999999999999875
No 454
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=53.26 E-value=21 Score=30.57 Aligned_cols=53 Identities=19% Similarity=0.144 Sum_probs=37.0
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCC
Q psy7981 149 FIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSK 203 (216)
Q Consensus 149 ~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~ 203 (216)
.+||...-.+..++..++ -.|.+|+|+|- .-||.-...++...|| +|+.+.+.
T Consensus 147 ~~~~~~~ta~~al~~~~~-~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~ 200 (352)
T 3fpc_A 147 MIPDMMTTGFHGAELANI-KLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSR 200 (352)
T ss_dssp TTTTHHHHHHHHHHHTTC-CTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCC
T ss_pred hccchhHHHHHHHHhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCC
Confidence 445433333444555454 36999999995 6889998888888999 78877653
No 455
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=53.18 E-value=6 Score=36.35 Aligned_cols=36 Identities=17% Similarity=0.200 Sum_probs=29.1
Q ss_pred CCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 167 TIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 167 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
.+.-++|.|||-+. .|.+++..|.+.|.+|+++...
T Consensus 12 ~~~~~~IgvIGlG~-MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 12 HMSKQQIGVVGMAV-MGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp ---CBSEEEECCSH-HHHHHHHHHHTTTCCEEEECSS
T ss_pred ccCCCeEEEEccHH-HHHHHHHHHHhCCCeEEEEeCC
Confidence 45678999999765 5999999999999999998754
No 456
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=53.16 E-value=13 Score=32.98 Aligned_cols=50 Identities=26% Similarity=0.232 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 153 TPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 153 Ta~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
|.....++.+... +..+++++|||-+. +|.-+|..|.+.|..||+++...
T Consensus 133 ~~~~~~~l~~~~~-~~~~~~vvIiG~G~-~g~e~A~~l~~~g~~Vtlv~~~~ 182 (447)
T 1nhp_A 133 GRQWAIKLKQKTV-DPEVNNVVVIGSGY-IGIEAAEAFAKAGKKVTVIDILD 182 (447)
T ss_dssp HHHHHHHHHHHHT-CTTCCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSS
T ss_pred CHHHHHHHHHHhh-hcCCCeEEEECCCH-HHHHHHHHHHHCCCeEEEEecCc
Confidence 4455555555432 23689999999765 59999999999999999998754
No 457
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=53.01 E-value=86 Score=25.05 Aligned_cols=67 Identities=9% Similarity=-0.013 Sum_probs=43.4
Q ss_pred CCCceEEEEEeCC-CcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCC
Q psy7981 39 DFEPGLAIVQVGG-REDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMP 108 (216)
Q Consensus 39 ~~~P~LaiI~vg~-~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlP 108 (216)
+....++++.-.- ++-...+++...+.|++.|+++....... +.++..+.++.+.. ..|+||++.-+
T Consensus 6 ~~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~--~~~~~~~~~~~l~~-~~vdgiIi~~~ 73 (291)
T 3egc_A 6 KRSNVVGLIVSDIENVFFAEVASGVESEARHKGYSVLLANTAE--DIVREREAVGQFFE-RRVDGLILAPS 73 (291)
T ss_dssp -CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHHHHHH-TTCSEEEECCC
T ss_pred CCCcEEEEEECCCcchHHHHHHHHHHHHHHHCCCEEEEEeCCC--CHHHHHHHHHHHHH-CCCCEEEEeCC
Confidence 3456677766432 33344557788899999999988876554 34444555665543 47999998533
No 458
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=52.95 E-value=16 Score=32.57 Aligned_cols=38 Identities=18% Similarity=0.177 Sum_probs=32.2
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.+-.+++++|||.+ .+|.-++..|.+.+..||+++...
T Consensus 176 ~~~~~~~v~ViGgG-~~g~e~A~~l~~~g~~Vtlv~~~~ 213 (476)
T 3lad_A 176 FQNVPGKLGVIGAG-VIGLELGSVWARLGAEVTVLEAMD 213 (476)
T ss_dssp CSSCCSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cccCCCeEEEECCC-HHHHHHHHHHHHcCCcEEEEecCC
Confidence 34468999999965 569999999999999999998764
No 459
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=52.86 E-value=12 Score=33.22 Aligned_cols=36 Identities=25% Similarity=0.225 Sum_probs=31.1
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.+++++|||-+ .+|--+|..|.+.+..||+++....
T Consensus 175 ~~~~vvViGgG-~~g~E~A~~l~~~g~~Vtlv~~~~~ 210 (467)
T 1zk7_A 175 IPERLAVIGSS-VVALELAQAFARLGSKVTVLARNTL 210 (467)
T ss_dssp CCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred cCCEEEEECCC-HHHHHHHHHHHHcCCEEEEEEECCc
Confidence 58999999966 5699999999999999999987543
No 460
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=52.79 E-value=86 Score=25.97 Aligned_cols=59 Identities=14% Similarity=0.179 Sum_probs=42.7
Q ss_pred ceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEE
Q psy7981 42 PGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIV 105 (216)
Q Consensus 42 P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlv 105 (216)
-++++|.-.....|...++...+.+++.|+++..+.... .+++...+..+..+ +++|.+
T Consensus 141 k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~~l~~~--~d~i~~ 199 (302)
T 3lkv_A 141 KSIGVVYNPGEANAVSLMELLKLSAAKHGIKLVEATALK---SADVQSATQAIAEK--SDVIYA 199 (302)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEEEEECSS---GGGHHHHHHHHHTT--CSEEEE
T ss_pred CEEEEEeCCCcccHHHHHHHHHHHHHHcCCEEEEEecCC---hHHHHHHHHhccCC--eeEEEE
Confidence 356666655556677788888999999999988776554 36677777777654 777665
No 461
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=52.71 E-value=12 Score=33.87 Aligned_cols=34 Identities=6% Similarity=0.086 Sum_probs=30.4
Q ss_pred CCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 170 GTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 170 Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+++|+|||-+. +|--+|..|.+.|..||+++...
T Consensus 176 ~~~vvViGgG~-ig~E~A~~l~~~g~~Vtlv~~~~ 209 (500)
T 1onf_A 176 SKKIGIVGSGY-IAVELINVIKRLGIDSYIFARGN 209 (500)
T ss_dssp CSEEEEECCSH-HHHHHHHHHHTTTCEEEEECSSS
T ss_pred CCeEEEECChH-HHHHHHHHHHHcCCeEEEEecCC
Confidence 89999999765 69999999999999999998754
No 462
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=52.66 E-value=9.5 Score=34.01 Aligned_cols=36 Identities=22% Similarity=0.170 Sum_probs=31.3
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
++++++|||-+. +|--+|..|.+.|..||++|...+
T Consensus 146 ~~~~vvViGgG~-ig~E~A~~l~~~g~~Vtlv~~~~~ 181 (437)
T 4eqs_A 146 QVDKVLVVGAGY-VSLEVLENLYERGLHPTLIHRSDK 181 (437)
T ss_dssp TCCEEEEECCSH-HHHHHHHHHHHHTCEEEEEESSSC
T ss_pred CCcEEEEECCcc-chhhhHHHHHhcCCcceeeeeecc
Confidence 478999999765 599999999999999999998654
No 463
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=52.59 E-value=13 Score=33.57 Aligned_cols=36 Identities=14% Similarity=0.065 Sum_probs=30.8
Q ss_pred CCeEEEecCCCcccHH-HHHHhhhCCCEEEEecCCCCC
Q psy7981 170 GTNAVVLGRSKIVGTP-AAELLKWKHATVTVCHSKTKN 206 (216)
Q Consensus 170 Gk~vvViGrS~~VG~P-la~lL~~~~ATVtichs~T~~ 206 (216)
.|+|.|||-+.. |.- +|.+|.++|+.|+.+..+...
T Consensus 18 ~~~i~viG~G~s-G~s~~A~~l~~~G~~V~~~D~~~~~ 54 (475)
T 1p3d_A 18 VQQIHFIGIGGA-GMSGIAEILLNEGYQISGSDIADGV 54 (475)
T ss_dssp CCEEEEETTTST-THHHHHHHHHHHTCEEEEEESCCSH
T ss_pred CCEEEEEeecHH-HHHHHHHHHHhCCCEEEEECCCCCH
Confidence 478999999976 884 999999999999999987643
No 464
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=52.55 E-value=10 Score=32.50 Aligned_cols=39 Identities=18% Similarity=0.251 Sum_probs=32.6
Q ss_pred HHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCC-EEEEecC
Q psy7981 161 IKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHS 202 (216)
Q Consensus 161 L~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs 202 (216)
|+..++ .|.+|+|+|. .-||.-...++...|| +|+..-+
T Consensus 161 l~~~~~--~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~ 200 (348)
T 2d8a_A 161 VLAGPI--SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEP 200 (348)
T ss_dssp HTTSCC--TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS
T ss_pred HHhcCC--CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC
Confidence 355555 9999999999 6889999999999999 8887654
No 465
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=52.37 E-value=11 Score=34.31 Aligned_cols=37 Identities=19% Similarity=0.135 Sum_probs=31.7
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
..+++|+|||-+. +|.-+|..|.+.|+.||+.+....
T Consensus 149 ~~~~~vvViGgG~-~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 149 NNVEHATVVGGGF-IGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp TTCSEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHhcCCcEEEEEcCCc
Confidence 3589999999665 699999999999999999987654
No 466
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=52.30 E-value=39 Score=26.80 Aligned_cols=64 Identities=9% Similarity=0.007 Sum_probs=41.4
Q ss_pred ceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCC
Q psy7981 42 PGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQMP 108 (216)
Q Consensus 42 P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlP 108 (216)
..+++|.-. .++--..+++...+.|++.|.++...... .+.++..+.++.+.. ..|+||++.-+
T Consensus 4 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~l~~-~~vdgii~~~~ 68 (275)
T 3d8u_A 4 YSIALIIPSLFEKACAHFLPSFQQALNKAGYQLLLGYSD--YSIEQEEKLLSTFLE-SRPAGVVLFGS 68 (275)
T ss_dssp CEEEEEESCSSCHHHHHHHHHHHHHHHHTSCEECCEECT--TCHHHHHHHHHHHHT-SCCCCEEEESS
T ss_pred eEEEEEeCCCccccHHHHHHHHHHHHHHCCCEEEEEcCC--CCHHHHHHHHHHHHh-cCCCEEEEeCC
Confidence 456666543 34444556678889999999987765433 344555566666653 57999998743
No 467
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=52.02 E-value=50 Score=26.60 Aligned_cols=61 Identities=13% Similarity=0.202 Sum_probs=41.3
Q ss_pred ceEEEEEeCC-CcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 42 PGLAIVQVGG-REDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 42 P~LaiI~vg~-~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
.++++|.-.- ++--...++...++|++.|+++....- . +.++-.+.++.+-.. .|+||++.
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~--~-~~~~~~~~i~~l~~~-~vdgiii~ 64 (306)
T 8abp_A 3 LKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAV--P-DGEKTLNAIDSLAAS-GAKGFVIC 64 (306)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHHHTEEEEEEEC--C-SHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHHcCCEEEEeCC--C-CHHHHHHHHHHHHHc-CCCEEEEe
Confidence 3555554432 344445567788999999988876543 2 566667777777654 59999986
No 468
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=51.97 E-value=18 Score=32.27 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=31.1
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.+++++|||-+ .+|.-+|..|.+.|..||+++....
T Consensus 177 ~~~~vvViGgG-~~g~E~A~~l~~~g~~Vtlv~~~~~ 212 (474)
T 1zmd_A 177 VPEKMVVIGAG-VIGVELGSVWQRLGADVTAVEFLGH 212 (474)
T ss_dssp CCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCceEEEECCC-HHHHHHHHHHHHcCCEEEEEeccCc
Confidence 57999999966 5699999999999999999987643
No 469
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=51.94 E-value=9 Score=33.14 Aligned_cols=34 Identities=15% Similarity=0.172 Sum_probs=30.3
Q ss_pred CCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 170 GTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 170 Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
|++|+|+|. .-||.-.+.++...||.|+...+..
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~ 214 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRRE 214 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 999999999 7789999999999999998887644
No 470
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=51.70 E-value=14 Score=34.78 Aligned_cols=35 Identities=23% Similarity=0.277 Sum_probs=30.0
Q ss_pred CCC-CeEEEecCCCcccHHHHHHhhhC------CCEEEEecCC
Q psy7981 168 IAG-TNAVVLGRSKIVGTPAAELLKWK------HATVTVCHSK 203 (216)
Q Consensus 168 l~G-k~vvViGrS~~VG~Pla~lL~~~------~ATVtichs~ 203 (216)
|+| |+|.|||-+. .|.+++.-|.+. |..|++....
T Consensus 51 L~GiKkIgIIGlGs-MG~AmA~nLr~s~~~~g~G~~ViVg~r~ 92 (525)
T 3fr7_A 51 FKGIKQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKIGLRK 92 (525)
T ss_dssp TTTCSEEEEECCTT-HHHHHHHHHHHHHHHTTCCCEEEEEECT
T ss_pred hcCCCEEEEEeEhH-HHHHHHHHHHhcccccCCCCEEEEEeCC
Confidence 689 9999999874 599999999998 9998876544
No 471
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=51.64 E-value=15 Score=33.00 Aligned_cols=38 Identities=18% Similarity=0.235 Sum_probs=32.1
Q ss_pred CCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 166 VTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 166 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
.+..+++|+|||-+ .+|.-+|..|.+.|..||+.+...
T Consensus 194 ~~~~~~~vvViGgG-~~g~E~A~~l~~~g~~Vtlv~~~~ 231 (491)
T 3urh_A 194 LEKVPASMIVVGGG-VIGLELGSVWARLGAKVTVVEFLD 231 (491)
T ss_dssp CSSCCSEEEEECCS-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred hhhcCCeEEEECCC-HHHHHHHHHHHHcCCEEEEEeccc
Confidence 44568999999965 569999999999999999998754
No 472
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=51.42 E-value=8.4 Score=35.26 Aligned_cols=36 Identities=25% Similarity=0.212 Sum_probs=31.2
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
..||+|+|||-+. +|--+|..|.+.+..||+++...
T Consensus 353 ~~~k~V~ViGgG~-~g~E~A~~L~~~g~~Vtlv~~~~ 388 (521)
T 1hyu_A 353 FKGKRVAVIGGGN-SGVEAAIDLAGIVEHVTLLEFAP 388 (521)
T ss_dssp GBTSEEEEECCSH-HHHHHHHHHHHHBSEEEEECSSS
T ss_pred cCCCeEEEECCCH-HHHHHHHHHHhhCCEEEEEEeCc
Confidence 4799999999775 59999999999999999998654
No 473
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=51.37 E-value=18 Score=30.53 Aligned_cols=44 Identities=11% Similarity=0.138 Sum_probs=32.7
Q ss_pred CCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC-ChHHHHhc
Q psy7981 170 GTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK-NIQDVVKS 213 (216)
Q Consensus 170 Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~-~l~~~~k~ 213 (216)
.++|.|||-...+|..++..|.+.|..|+++..... ++.+.+++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~~~~~~~~ 65 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILAN 65 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTT
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccCHHHHhcC
Confidence 578999995555699999999999999999865332 34444443
No 474
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=51.27 E-value=9.8 Score=35.05 Aligned_cols=56 Identities=16% Similarity=0.173 Sum_probs=30.3
Q ss_pred CcccCCHHHHHHHHHHhCCCCCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 148 GFIPCTPNGVLELIKRTNVTIAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 148 ~~~PcTa~av~~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
-++=+++..+-++.+..+.....++++|+|-+.+ |..++..|.++|..|++....-
T Consensus 326 L~v~g~~~~l~~~~~~~~~~~~~~~viIiG~G~~-G~~la~~L~~~g~~v~vid~d~ 381 (565)
T 4gx0_A 326 LVLAGTKSQLAALEYLIGEAPEDELIFIIGHGRI-GCAAAAFLDRKPVPFILIDRQE 381 (565)
T ss_dssp ---------------------CCCCEEEECCSHH-HHHHHHHHHHTTCCEEEEESSC
T ss_pred EEEEeCHHHHHHHHHHhcCCCCCCCEEEECCCHH-HHHHHHHHHHCCCCEEEEECCh
Confidence 3455677777777777776555599999998655 9999999999999999998654
No 475
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=51.12 E-value=14 Score=32.88 Aligned_cols=36 Identities=19% Similarity=0.239 Sum_probs=31.2
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.+++|+|||-+ .+|.-+|..|.+.|..||+++....
T Consensus 176 ~~~~vvViGgG-~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 176 IPKKLVVIGAG-YIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp CCSEEEESCCS-HHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred cCCeEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 58999999966 5699999999999999999987653
No 476
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=56.41 E-value=3.2 Score=33.46 Aligned_cols=35 Identities=9% Similarity=0.027 Sum_probs=28.9
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+.+++|.|||-+.+ |..++..|.+.|..|+++...
T Consensus 17 ~~~~~I~iIG~G~m-G~~la~~L~~~G~~V~~~~r~ 51 (201)
T 2yjz_A 17 EKQGVVCIFGTGDF-GKSLGLKMLQCGYSVVFGSRN 51 (201)
Confidence 46788999997654 999999999989999988653
No 477
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=50.96 E-value=13 Score=32.08 Aligned_cols=35 Identities=26% Similarity=0.225 Sum_probs=29.8
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
+..+|+|||.+.. |.-+|..|.++|..|++.-...
T Consensus 22 ~~~dV~IVGaG~a-Gl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIG-GLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCCHH-HHHHHHHHHhCCCCEEEEeCCC
Confidence 3568999997754 9999999999999999998754
No 478
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=50.89 E-value=59 Score=25.90 Aligned_cols=61 Identities=11% Similarity=0.074 Sum_probs=38.7
Q ss_pred eEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 43 GLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 43 ~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
.++++.-. +++--...++...+.|++.|.++....-. .+.++-.+.++.+- ...|+||++.
T Consensus 3 ~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~~~~--~~~~~~~~~i~~l~-~~~vdgiIi~ 64 (271)
T 2dri_A 3 TIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQ--NNPAKELANVQDLT-VRGTKILLIN 64 (271)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECT--TCHHHHHHHHHHHT-TTTEEEEEEC
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHHHHcCcEEEEeCCC--CCHHHHHHHHHHHH-HcCCCEEEEe
Confidence 45555432 23333445677788999999888765433 23444556677775 3579999984
No 479
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=50.85 E-value=80 Score=24.70 Aligned_cols=62 Identities=16% Similarity=0.198 Sum_probs=39.7
Q ss_pred eEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeC
Q psy7981 43 GLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQM 107 (216)
Q Consensus 43 ~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvql 107 (216)
.+++|.-. +++--..+++...+.|++.|..+...... .+.++-.+.++.+.. ..|+||++.-
T Consensus 4 ~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~l~~-~~vdgiI~~~ 66 (255)
T 1byk_A 4 VVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQ--FSPQLVAEHLGVLKR-RNIDGVVLFG 66 (255)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHHTCEEEEEECT--TCHHHHHHHHHHHHT-TTCCEEEEEC
T ss_pred EEEEEeCCCCCccHHHHHHHHHHHHHHcCCEEEEEeCC--CcHHHHHHHHHHHHh-cCCCEEEEec
Confidence 45555532 23333445677889999999988776533 234444556666643 5799999974
No 480
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=50.62 E-value=74 Score=24.76 Aligned_cols=64 Identities=14% Similarity=0.181 Sum_probs=44.6
Q ss_pred CCCceEEEEEeCCCc----chHHHHHHHHHHHHHcCcceEEE-eCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 39 DFEPGLAIVQVGGRE----DSNVYIRMKMKAAKEIGIDAQHV-KLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 39 ~~~P~LaiI~vg~~~----as~~Yv~~k~k~a~~~Gi~~~~~-~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
-.+|+.+||.+|+.- ++..|. .....++.|+++..+ .+|+ +.+++.+.|+++-++...|-|+..
T Consensus 8 ~~~~~v~Ii~tGdE~g~i~D~n~~~--l~~~L~~~G~~v~~~~iv~D--d~~~i~~~l~~a~~~~~~DlVitt 76 (172)
T 1mkz_A 8 FIPTRIAILTVSNRRGEEDDTSGHY--LRDSAQEAGHHVVDKAIVKE--NRYAIRAQVSAWIASDDVQVVLIT 76 (172)
T ss_dssp CCCCEEEEEEECSSCCGGGCHHHHH--HHHHHHHTTCEEEEEEEECS--CHHHHHHHHHHHHHSSSCCEEEEE
T ss_pred CCCCEEEEEEEeCCCCcccCccHHH--HHHHHHHCCCeEeEEEEeCC--CHHHHHHHHHHHHhcCCCCEEEeC
Confidence 357999999999763 344443 466677889988654 4454 458888899887665456767665
No 481
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=50.46 E-value=52 Score=26.37 Aligned_cols=55 Identities=13% Similarity=0.263 Sum_probs=45.3
Q ss_pred CceEEEEE----------eCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCC
Q psy7981 41 EPGLAIVQ----------VGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDP 98 (216)
Q Consensus 41 ~P~LaiI~----------vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 98 (216)
+.++++|. ..++.++..-++...+..+++|++++.+. +.+.+|+.+.|+++...+
T Consensus 43 ~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LGF~V~~~~---dlt~~em~~~l~~~~~~d 107 (179)
T 3p45_A 43 RRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFN---DLKAEELLLKIHEVSTVS 107 (179)
T ss_dssp BCCEEEEEECCSCCGGGCCCCCTTHHHHHHHHHHHHHHTTCEEEEEE---SCCHHHHHHHHHHHHTSC
T ss_pred ccCEEEEEeCcccCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEe---CCCHHHHHHHHHHHhhhh
Confidence 44688884 34567888999999999999999998874 789999999999997643
No 482
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=50.42 E-value=12 Score=34.08 Aligned_cols=32 Identities=22% Similarity=0.192 Sum_probs=28.2
Q ss_pred CeEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 171 TNAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 171 k~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
++|.|||-+ .+|.++|..|.+.|..|+++...
T Consensus 38 ~kV~VIGaG-~MG~~iA~~la~~G~~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLG-TMGRGIAISFARVGISVVAVESD 69 (463)
T ss_dssp CEEEEECCS-HHHHHHHHHHHTTTCEEEEECSS
T ss_pred CEEEEECcC-HHHHHHHHHHHhCCCeEEEEECC
Confidence 689999975 56999999999999999999754
No 483
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=50.36 E-value=97 Score=25.13 Aligned_cols=77 Identities=18% Similarity=0.138 Sum_probs=51.4
Q ss_pred cccHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHH
Q psy7981 13 LSGTAVSGDIREGLKERVKKLKERLPDFEPGLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLK 92 (216)
Q Consensus 13 l~Gk~vA~~i~~~ik~~v~~l~~~~~~~~P~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~ 92 (216)
+||.+-+....+........+ .-.|-++.+.+.+....+.+...+.+++.|++++...... ...+++++..+
T Consensus 177 ~d~s~~s~~al~~a~~la~~~-------~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~g-~~~~~I~~~a~ 248 (294)
T 3loq_A 177 YDFSKWADRALEYAKFVVKKT-------GGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHVHIESG-TPHKAILAKRE 248 (294)
T ss_dssp CCSSHHHHHHHHHHHHHHHHH-------TCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEECS-CHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHHHhhhc-------CCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEEEEecC-CHHHHHHHHHH
Confidence 577777776666555443322 2357888888766667777777778888898877655544 44567777777
Q ss_pred HhcCC
Q psy7981 93 KLNED 97 (216)
Q Consensus 93 ~lN~D 97 (216)
+.+.|
T Consensus 249 ~~~~d 253 (294)
T 3loq_A 249 EINAT 253 (294)
T ss_dssp HTTCS
T ss_pred hcCcC
Confidence 66655
No 484
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=50.24 E-value=20 Score=31.91 Aligned_cols=36 Identities=22% Similarity=0.295 Sum_probs=31.4
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.+++++|||-+ .+|.-+|..|.+.|..||+.+....
T Consensus 173 ~~~~vvViGgG-~~g~E~A~~l~~~g~~Vtlv~~~~~ 208 (468)
T 2qae_A 173 VPKTMVVIGGG-VIGLELGSVWARLGAEVTVVEFAPR 208 (468)
T ss_dssp CCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCceEEEECCC-HHHHHHHHHHHHhCCEEEEEecCCc
Confidence 68999999976 4699999999999999999987643
No 485
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=49.78 E-value=14 Score=33.03 Aligned_cols=36 Identities=22% Similarity=0.298 Sum_probs=31.3
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.+++|+|||-+. +|.-+|..|.+.|..||+++....
T Consensus 165 ~~~~vvVvGgG~-~g~e~A~~l~~~G~~Vtlv~~~~~ 200 (463)
T 2r9z_A 165 QPKRVAIIGAGY-IGIELAGLLRSFGSEVTVVALEDR 200 (463)
T ss_dssp CCSEEEEECCSH-HHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCEEEEECCCH-HHHHHHHHHHhcCCEEEEEEcCCc
Confidence 579999999765 599999999999999999987643
No 486
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=49.78 E-value=79 Score=23.65 Aligned_cols=92 Identities=17% Similarity=0.300 Sum_probs=52.6
Q ss_pred CceEEEEEeCCCcch--------HHHHHHHHHHHHHcCcceEEEeC--CCCCC---HHHHHHHHHHhcCCCCccEEEEeC
Q psy7981 41 EPGLAIVQVGGREDS--------NVYIRMKMKAAKEIGIDAQHVKL--PRSIT---EIELLSRLKKLNEDPSVHGIIVQM 107 (216)
Q Consensus 41 ~P~LaiI~vg~~~as--------~~Yv~~k~k~a~~~Gi~~~~~~l--~~~~~---~~el~~~I~~lN~D~~V~GIlvql 107 (216)
+|.+++|..|-|... ....+...+.+++.|..+..... |.... .+++-+.++++.++.+|.-|
T Consensus 62 ~pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~~~~p~~~~~~~~~~~n~~~~~~a~~~~v~~i---- 137 (190)
T 1ivn_A 62 QPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVPLL---- 137 (190)
T ss_dssp CCSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCGGGCHHHHHHHHHHHHHHHHHTTCCEE----
T ss_pred CCCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEeccCCcchhHHHHHHHHHHHHHHHHHcCCeEE----
Confidence 589999999987642 23345556666677877766653 54333 24566667776665554422
Q ss_pred CCCCCCCCCHHHHhhhcCCC-CCcccCCccchhHhhcC
Q psy7981 108 PLDSDNDINAMLVTDSVSPE-KDVDGLNTINEGRVAIG 144 (216)
Q Consensus 108 PL~~P~~id~~~i~~~I~p~-KDVDG~~~~n~G~l~~~ 144 (216)
+++ .... ...|. --.||+||...|.-...
T Consensus 138 D~~------~~~~--~~~~~~~~~Dg~Hpn~~G~~~~a 167 (190)
T 1ivn_A 138 PFF------MEEV--YLKPQWMQDDGIHPNRDAQPFIA 167 (190)
T ss_dssp CCT------HHHH--HTCGGGBCTTSSSBCGGGHHHHH
T ss_pred ccH------Hhhc--cCCchhhcCCCCCCCHHHHHHHH
Confidence 221 0000 11221 23599999888765543
No 487
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=49.73 E-value=47 Score=27.46 Aligned_cols=65 Identities=11% Similarity=0.029 Sum_probs=41.4
Q ss_pred CCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCC-CccEEEEe
Q psy7981 40 FEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDP-SVHGIIVQ 106 (216)
Q Consensus 40 ~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~-~V~GIlvq 106 (216)
....+++|.-. +++-...+++...+.|++.|+++....... +.++-.+.++.+-... +|+||++.
T Consensus 4 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~l~~~~~~~--~~~~~~~~i~~l~~~~~~vdgiIi~ 70 (332)
T 2rjo_A 4 GQTTLACSFRSLTNPYYTAFNKGAQSFAKSVGLPYVPLTTEG--SSEKGIADIRALLQKTGGNLVLNVD 70 (332)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHHTCCEEEEECTT--CHHHHHHHHHHHHHHTTTCEEEEEC
T ss_pred CccEEEEEecCCCcHHHHHHHHHHHHHHHHcCCEEEEecCCC--CHHHHHHHHHHHHHCCCCCCEEEEe
Confidence 44566666642 234444556788899999999988765433 3444455566654432 29999985
No 488
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=49.58 E-value=1e+02 Score=24.93 Aligned_cols=65 Identities=11% Similarity=0.001 Sum_probs=41.8
Q ss_pred CCceEEEEEeC-CCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeC
Q psy7981 40 FEPGLAIVQVG-GREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQM 107 (216)
Q Consensus 40 ~~P~LaiI~vg-~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvql 107 (216)
....+++|.-. .++--..+++...+.|++.|..+.......+. +.-.+.++.+.. ..|+||++.-
T Consensus 14 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~--~~~~~~~~~l~~-~~vdgiI~~~ 79 (303)
T 3kke_A 14 RSGTIGLIVPDVNNAVFADMFSGVQMAASGHSTDVLLGQIDAPP--RGTQQLSRLVSE-GRVDGVLLQR 79 (303)
T ss_dssp ---CEEEEESCTTSTTHHHHHHHHHHHHHHTTCCEEEEECCSTT--HHHHHHHHHHHS-CSSSEEEECC
T ss_pred CCCEEEEEeCCCcChHHHHHHHHHHHHHHHCCCEEEEEeCCCCh--HHHHHHHHHHHh-CCCcEEEEec
Confidence 33456666543 24445666788899999999999887655433 334555665544 4799999963
No 489
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=49.54 E-value=6.6 Score=33.98 Aligned_cols=31 Identities=39% Similarity=0.446 Sum_probs=27.1
Q ss_pred eEEEecCCCcccHHHHHHhhhCCCEEEEecCC
Q psy7981 172 NAVVLGRSKIVGTPAAELLKWKHATVTVCHSK 203 (216)
Q Consensus 172 ~vvViGrS~~VG~Pla~lL~~~~ATVtichs~ 203 (216)
+|.|||-+. +|.+++..|.+.|..|+++...
T Consensus 17 kI~iIG~G~-mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGA-FGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSH-HHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCH-HHHHHHHHHHhCCCEEEEEECC
Confidence 799999865 5999999999999999998654
No 490
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=49.46 E-value=22 Score=30.61 Aligned_cols=51 Identities=22% Similarity=0.249 Sum_probs=37.2
Q ss_pred ccCCHHHHHHHHHH--hCCCCCCCeEEEecCCCcccHHHHHHhhhC-CCEEEEecC
Q psy7981 150 IPCTPNGVLELIKR--TNVTIAGTNAVVLGRSKIVGTPAAELLKWK-HATVTVCHS 202 (216)
Q Consensus 150 ~PcTa~av~~lL~~--~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~-~ATVtichs 202 (216)
++|.....+..|+. .++ -.|.+|+|+|.+ -||.-...++... ||+|+..-+
T Consensus 166 l~~~~~ta~~al~~~~~~~-~~g~~VlV~GaG-~vG~~avqlak~~~Ga~Vi~~~~ 219 (359)
T 1h2b_A 166 LADAGITAYRAVKKAARTL-YPGAYVAIVGVG-GLGHIAVQLLKVMTPATVIALDV 219 (359)
T ss_dssp GGTHHHHHHHHHHHHHTTC-CTTCEEEEECCS-HHHHHHHHHHHHHCCCEEEEEES
T ss_pred hhhhHHHHHHHHHhhccCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCCeEEEEeC
Confidence 45544444555655 333 369999999995 7899998888888 999887754
No 491
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=49.39 E-value=79 Score=25.43 Aligned_cols=50 Identities=16% Similarity=0.135 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q psy7981 56 NVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIVQ 106 (216)
Q Consensus 56 ~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq 106 (216)
...++...+.|++.|+.+.....+.+.+.+.-.+.++.+-. ..|+||++.
T Consensus 17 ~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vdgiIi~ 66 (288)
T 1gud_A 17 VDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN-KNYKGIAFA 66 (288)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSTTCHHHHHHHHHHHHT-SSEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCCCCHHHHHHHHHHHHH-cCCCEEEEe
Confidence 33456778899999998877653233344555566666654 469999985
No 492
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=49.38 E-value=16 Score=34.73 Aligned_cols=39 Identities=26% Similarity=0.276 Sum_probs=33.3
Q ss_pred CCCCCeEEEecC-CCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 167 TIAGTNAVVLGR-SKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 167 ~l~Gk~vvViGr-S~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
...|++|+|||. +..+|.-++..|...+..||+++....
T Consensus 520 ~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~ 559 (690)
T 3k30_A 520 LPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQ 559 (690)
T ss_dssp CCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccc
Confidence 347999999994 567899999999999999999987653
No 493
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=49.01 E-value=43 Score=27.31 Aligned_cols=64 Identities=19% Similarity=0.185 Sum_probs=44.5
Q ss_pred eEEEEEeCCCcch--HHHHHHHHHHHHHcCcceEEEeCCCCC-----C-----------------------------HHH
Q psy7981 43 GLAIVQVGGREDS--NVYIRMKMKAAKEIGIDAQHVKLPRSI-----T-----------------------------EIE 86 (216)
Q Consensus 43 ~LaiI~vg~~~as--~~Yv~~k~k~a~~~Gi~~~~~~l~~~~-----~-----------------------------~~e 86 (216)
++.+|....++.| ..-++.-.+.+++.|.+++.++|.+.- + .++
T Consensus 3 kiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL~~~~~~P~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~dd 82 (228)
T 3tem_A 3 KVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLASD 82 (228)
T ss_dssp EEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEETTTTTCCCCCCGGGBCSCCSCTTSCCHHHHHHHHHHHTCBCHH
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEhhhcCCcccCCHHHHhhhccccccccchhhhhhhhhcCCCcHH
Confidence 5667777777775 444566777777889999999986521 1 245
Q ss_pred HHHHHHHhcCCCCccEEEEeCCC
Q psy7981 87 LLSRLKKLNEDPSVHGIIVQMPL 109 (216)
Q Consensus 87 l~~~I~~lN~D~~V~GIlvqlPL 109 (216)
+.+..+++. .-|+|+++.|+
T Consensus 83 ~~~~~~~l~---~aD~iv~~~P~ 102 (228)
T 3tem_A 83 ITDEQKKVR---EADLVIFQFPL 102 (228)
T ss_dssp HHHHHHHHH---HCSEEEEEEEC
T ss_pred HHHHHHHHH---hCCEEEEECCh
Confidence 666666663 45799999998
No 494
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=48.99 E-value=14 Score=32.70 Aligned_cols=36 Identities=14% Similarity=0.279 Sum_probs=31.2
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.+++++|||-+. +|.-+|..|.+.|..||+++....
T Consensus 148 ~~~~vvViGgG~-~g~E~A~~l~~~g~~Vtlv~~~~~ 183 (452)
T 2cdu_A 148 KAKTITIIGSGY-IGAELAEAYSNQNYNVNLIDGHER 183 (452)
T ss_dssp GCSEEEEECCSH-HHHHHHHHHHTTTCEEEEEESSSS
T ss_pred cCCeEEEECcCH-HHHHHHHHHHhcCCEEEEEEcCCc
Confidence 589999999765 699999999999999999987543
No 495
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=48.88 E-value=97 Score=25.26 Aligned_cols=58 Identities=14% Similarity=0.184 Sum_probs=38.5
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCcceEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEE
Q psy7981 43 GLAIVQVGGREDSNVYIRMKMKAAKEIGIDAQHVKLPRSITEIELLSRLKKLNEDPSVHGIIV 105 (216)
Q Consensus 43 ~LaiI~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlv 105 (216)
++++|.-..+..+..-.+.-.+++++.|+++....... .++..+.+++|-. .+++|+.
T Consensus 142 ~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~~~~~~~---~~~~~~~~~~l~~--~~dai~~ 199 (302)
T 2qh8_A 142 SIGVVYNPGEANAVSLMELLKLSAAKHGIKLVEATALK---SADVQSATQAIAE--KSDVIYA 199 (302)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTCEEEEEECSS---GGGHHHHHHHHGG--GCSEEEE
T ss_pred EEEEEecCCCcchHHHHHHHHHHHHHcCCEEEEEecCC---hHHHHHHHHHHhc--cCCEEEE
Confidence 67777633233344445666788999999987665432 3667777777753 5788877
No 496
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=48.73 E-value=16 Score=32.67 Aligned_cols=36 Identities=11% Similarity=0.185 Sum_probs=31.2
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKTK 205 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T~ 205 (216)
.+++++|||-+ .+|--+|..|.+.|..||+++....
T Consensus 184 ~~~~vvViGgG-~ig~E~A~~l~~~G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 184 VPGKLLIIGGG-IIGLEMGTVYSTLGSRLDVVEMMDG 219 (482)
T ss_dssp CCSEEEEESCS-HHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred cCCeEEEECCC-HHHHHHHHHHHHcCCeEEEEEECCc
Confidence 48999999966 5699999999999999999987643
No 497
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=48.65 E-value=14 Score=32.12 Aligned_cols=55 Identities=24% Similarity=0.299 Sum_probs=38.0
Q ss_pred cccCCHHHHHHHH-HHhCCCC----CCCeEEEecCCCcccHHHHHHhhh-CCCEEEEecCC
Q psy7981 149 FIPCTPNGVLELI-KRTNVTI----AGTNAVVLGRSKIVGTPAAELLKW-KHATVTVCHSK 203 (216)
Q Consensus 149 ~~PcTa~av~~lL-~~~~i~l----~Gk~vvViGrS~~VG~Pla~lL~~-~~ATVtichs~ 203 (216)
.+||+....+..| +..++.. .|.+|+|+|.+.-||.-...++.. .+++|+..-+.
T Consensus 146 ~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~ 206 (363)
T 4dvj_A 146 ALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASR 206 (363)
T ss_dssp TSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred hhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 3455443344444 3334432 699999999888999988888876 69999887653
No 498
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=48.58 E-value=11 Score=32.23 Aligned_cols=33 Identities=12% Similarity=0.078 Sum_probs=28.1
Q ss_pred CCeEEEecCCCcccHHHHHHhhhCCC-EEEEecCC
Q psy7981 170 GTNAVVLGRSKIVGTPAAELLKWKHA-TVTVCHSK 203 (216)
Q Consensus 170 Gk~vvViGrS~~VG~Pla~lL~~~~A-TVtichs~ 203 (216)
-++|.|||-+ .+|.+++..|.+.|. .|+++...
T Consensus 24 ~~~I~iIG~G-~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFG-EAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCS-HHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECcc-HHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4789999975 559999999999999 99999764
No 499
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=48.57 E-value=12 Score=32.12 Aligned_cols=34 Identities=15% Similarity=0.186 Sum_probs=29.1
Q ss_pred CCCeEEEecCCCcccHHHHHHhhhCCC--EEEEecCC
Q psy7981 169 AGTNAVVLGRSKIVGTPAAELLKWKHA--TVTVCHSK 203 (216)
Q Consensus 169 ~Gk~vvViGrS~~VG~Pla~lL~~~~A--TVtichs~ 203 (216)
..++|.||| ...+|..++..|.+.|. +|+++...
T Consensus 32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 458999999 45679999999999998 99998764
No 500
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=48.53 E-value=21 Score=31.75 Aligned_cols=36 Identities=11% Similarity=0.122 Sum_probs=31.0
Q ss_pred CCCCeEEEecCCCcccHHHHHHhhhCCCEEEEecCCC
Q psy7981 168 IAGTNAVVLGRSKIVGTPAAELLKWKHATVTVCHSKT 204 (216)
Q Consensus 168 l~Gk~vvViGrS~~VG~Pla~lL~~~~ATVtichs~T 204 (216)
-.+++++|||-+. +|.-+|..|.+.+..||+++...
T Consensus 185 ~~~~~vvViGgG~-~g~E~A~~l~~~g~~Vtlv~~~~ 220 (478)
T 3dk9_A 185 ELPGRSVIVGAGY-IAVEMAGILSALGSKTSLMIRHD 220 (478)
T ss_dssp SCCSEEEEECCSH-HHHHHHHHHHHTTCEEEEECSSS
T ss_pred hcCccEEEECCCH-HHHHHHHHHHHcCCeEEEEEeCC
Confidence 3489999999765 59999999999999999998754
Done!