Query psy7988
Match_columns 73
No_of_seqs 116 out of 552
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 23:55:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7988.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7988hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p1i_A Ribonucleotide reductas 99.7 1.9E-18 6.4E-23 128.0 2.1 60 14-73 290-349 (349)
2 1h0o_A Ribonucleoside-diphosph 99.7 4.3E-18 1.5E-22 128.2 2.3 59 15-73 332-390 (390)
3 1jk0_B RNR Y4, ribonucleoside- 99.7 6.2E-18 2.1E-22 125.1 1.3 60 14-73 284-345 (345)
4 1jk0_A RNR Y2, ribonucleoside- 99.7 2E-17 7E-22 125.8 2.3 60 14-73 357-419 (419)
5 1syy_A Ribonucleoside-diphosph 99.3 1.8E-13 6.1E-18 100.7 2.0 46 14-59 298-344 (346)
6 2rcc_A Ribonucleoside-diphosph 99.2 1.9E-12 6.5E-17 95.1 2.1 46 14-59 291-340 (346)
7 1mxr_A Ribonucleotide reductas 99.2 4.8E-12 1.6E-16 94.1 2.8 46 14-59 314-362 (375)
8 4dr0_A Ribonucleoside-diphosph 99.2 6.2E-12 2.1E-16 93.3 1.3 54 14-69 287-343 (350)
9 3n37_A Ribonucleoside-diphosph 99.1 2.1E-11 7.1E-16 89.1 0.8 46 14-60 260-311 (319)
10 4a58_A Ribonucleoside-diphosph 99.1 4.2E-11 1.4E-15 88.0 2.0 44 14-57 276-320 (324)
11 3dhz_A Ribonucleotide reductas 99.0 5.3E-11 1.8E-15 87.4 0.7 46 14-60 270-321 (329)
12 3olj_A Ribonucleoside-diphosph 97.6 1.7E-05 5.7E-10 57.0 2.0 21 14-34 266-286 (286)
13 2o1z_A Ribonucleotide reductas 97.6 2.3E-05 7.9E-10 57.0 2.2 23 14-36 289-311 (311)
14 3lph_A Protein REV; helix-loop 37.7 1.7 5.8E-05 26.0 -2.7 32 4-35 3-34 (72)
15 2x7l_M HIV REV; nuclear export 34.1 3.3 0.00011 26.7 -1.9 32 5-36 1-32 (115)
16 3mjo_A Ribonucleotide reductas 30.9 18 0.00061 25.6 1.2 14 14-27 269-282 (296)
No 1
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, S genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii}
Probab=99.71 E-value=1.9e-18 Score=128.01 Aligned_cols=60 Identities=47% Similarity=0.794 Sum_probs=18.8
Q ss_pred HHHHHcCCCcccCCCCCcchhhhccccccccchhhhhhhhhhccccccCCCceeeecCCC
Q psy7988 14 ALTRYCFVLQHYFAENPFDFMENISLEGKTNFFERKVGEYQKSSVMADQDNQVFRLDEQF 73 (73)
Q Consensus 14 ~ll~~lG~~kiY~~~NPf~Wme~is~~~ktNFFE~rVt~Yqk~~~~~~~~~~~f~~deDF 73 (73)
.+|.+||++++|++.||+|||+.++..+|+||||+||++|+++++++...+.+|++|+||
T Consensus 290 ~~L~~LG~~~~y~~~nP~~wm~~~~~~~k~nFFe~r~~~Y~k~~~~~~~~~~~~~~~~~f 349 (349)
T 2p1i_A 290 RLLECLGCSKVFHSKNPFNWMDLISLQGKTNFFEKRVADYQKSGVMAQRKEQVFSLNTDF 349 (349)
T ss_dssp HHHHHTTCCCSSCCCCSCCC----------------------------------------
T ss_pred HHHHHcCCCCCCCCCCChHHHHHhcccccCCcccCCccccccccccccCCCCeeecCCCC
Confidence 379999999999999999999999989999999999999999998876667889999998
No 2
>1h0o_A Ribonucleoside-diphosphate reductase; oxidoreductase, ribonucleotide reductase, dinuclear metal-cluster; 2.2A {Mus musculus} SCOP: a.25.1.2 PDB: 1h0n_A 1w68_A 1w69_A 1xsm_A 2uw2_A 3hf1_A 2vux_A
Probab=99.69 E-value=4.3e-18 Score=128.22 Aligned_cols=59 Identities=54% Similarity=0.844 Sum_probs=20.4
Q ss_pred HHHHcCCCcccCCCCCcchhhhccccccccchhhhhhhhhhccccccCCCceeeecCCC
Q psy7988 15 LTRYCFVLQHYFAENPFDFMENISLEGKTNFFERKVGEYQKSSVMADQDNQVFRLDEQF 73 (73)
Q Consensus 15 ll~~lG~~kiY~~~NPf~Wme~is~~~ktNFFE~rVt~Yqk~~~~~~~~~~~f~~deDF 73 (73)
+|.+||++++|++.||++||+.++..+|+||||+||++|+++++++...+.+|++|+||
T Consensus 332 ~L~~LG~~~~y~~~NP~~wm~~~s~~~ktnFFE~r~t~Y~k~~~~~~~~~~~~~~~~~f 390 (390)
T 1h0o_A 332 LMLELGFNKIFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSNSTENSFTLDADF 390 (390)
T ss_dssp HHHHTTCCCSSCCCCSCGGGC--------------------------------------
T ss_pred HHHHCCCCCCCCCCCChHHHHhhcccccCccccCCccccccccccccCcCceeecCCCC
Confidence 79999999999999999999999999999999999999999998877667889999998
No 3
>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=99.67 E-value=6.2e-18 Score=125.06 Aligned_cols=60 Identities=40% Similarity=0.649 Sum_probs=11.0
Q ss_pred HHHHHcCCCcccCCCCCcchhhhccccccccchhhhhhhhhhccccccC--CCceeeecCCC
Q psy7988 14 ALTRYCFVLQHYFAENPFDFMENISLEGKTNFFERKVGEYQKSSVMADQ--DNQVFRLDEQF 73 (73)
Q Consensus 14 ~ll~~lG~~kiY~~~NPf~Wme~is~~~ktNFFE~rVt~Yqk~~~~~~~--~~~~f~~deDF 73 (73)
.+|.+||++++|++.||+|||+.++..+|+||||+||++|++++++++. .+.+|++|+||
T Consensus 284 ~~L~~LG~~~~y~~~nP~~wm~~~~~~~k~nFFe~r~~~Y~~~~~~~~~~~~~~~~~~~~~f 345 (345)
T 1jk0_B 284 GLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVSDYQKASDMSKSATPSKEINFDDDF 345 (345)
T ss_dssp HHHHHTTCCCCC--------------------------------------------------
T ss_pred HHHHHCCCCCCCCCCCCHHHHHHhcccccCccccCCcchhhcccccccccCCCceeecCCCC
Confidence 3799999999999999999999998889999999999999999988754 36789999998
No 4
>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A
Probab=99.65 E-value=2e-17 Score=125.78 Aligned_cols=60 Identities=50% Similarity=0.785 Sum_probs=21.7
Q ss_pred HHHHHcCCCcccCCCCCcchhhhccccccccchhhhhhhhhhccccccC---CCceeeecCCC
Q psy7988 14 ALTRYCFVLQHYFAENPFDFMENISLEGKTNFFERKVGEYQKSSVMADQ---DNQVFRLDEQF 73 (73)
Q Consensus 14 ~ll~~lG~~kiY~~~NPf~Wme~is~~~ktNFFE~rVt~Yqk~~~~~~~---~~~~f~~deDF 73 (73)
.+|.+||++++|++.||++||+.++..+|+||||+||++|+++++++.. .+..|+||+||
T Consensus 357 r~L~~LG~~~~y~~~NP~~wm~~is~~~ktnFFE~r~t~Y~k~~~~~~~~~~~~~~~~~~~~f 419 (419)
T 1jk0_A 357 RLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVSDYQKAGVMSKSTKQEAGAFTFNEDF 419 (419)
T ss_dssp HHHHTTTCCCSSCCCCCCGGGGC----------------------------------------
T ss_pred HHHHHcCCCCCCCCCCChHHHHHhccccccccCcCCcccccccccccccCCCCCCccccCCCC
Confidence 3799999999999999999999999899999999999999999988654 25679999998
No 5
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=99.35 E-value=1.8e-13 Score=100.73 Aligned_cols=46 Identities=35% Similarity=0.550 Sum_probs=19.8
Q ss_pred HHHHHcCCCcccCCCCCcchh-hhccccccccchhhhhhhhhhcccc
Q psy7988 14 ALTRYCFVLQHYFAENPFDFM-ENISLEGKTNFFERKVGEYQKSSVM 59 (73)
Q Consensus 14 ~ll~~lG~~kiY~~~NPf~Wm-e~is~~~ktNFFE~rVt~Yqk~~~~ 59 (73)
.+|.+||++++|+++||+||| +.++.++++||||+||++|++++++
T Consensus 298 ~rL~~lG~~~~y~~~np~pw~~~~~~~~~~~nFFe~~~~~Y~~~~~~ 344 (346)
T 1syy_A 298 RRLERIGLKPIYHTKNPFPWMSETIDLNKEKNFFETRVIEYQHAASL 344 (346)
T ss_dssp HHHHHTTCCCSSCCCCSCTTC--------------------------
T ss_pred HHHHHcCCCCCCCCCCCchHHHHHhCcCCCCCCCcCCCccccccccC
Confidence 379999999999999999999 7788888899999999999999864
No 6
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=99.23 E-value=1.9e-12 Score=95.14 Aligned_cols=46 Identities=26% Similarity=0.446 Sum_probs=19.5
Q ss_pred HHHHHcCCCccc--CCCCCcchhhhcc-c-cccccchhhhhhhhhhcccc
Q psy7988 14 ALTRYCFVLQHY--FAENPFDFMENIS-L-EGKTNFFERKVGEYQKSSVM 59 (73)
Q Consensus 14 ~ll~~lG~~kiY--~~~NPf~Wme~is-~-~~ktNFFE~rVt~Yqk~~~~ 59 (73)
.+|.+||++++| ++.||++||+... . .+|+||||+||++|++++++
T Consensus 291 ~~L~~lG~~~~f~~~~~nP~~w~~~~~~~~~~~~nFFe~~~~~Y~~~~~~ 340 (346)
T 2rcc_A 291 KRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSDFFEQKSRQYAKVSAD 340 (346)
T ss_dssp HHHHHTTCCCSCTTCCSCSCTTC---------------------------
T ss_pred HHHHHcCCCCCCCCCCCCcHHHHHHHhccCccccCCCcCCccccccccCc
Confidence 379999999999 7899999997754 5 67999999999999998754
No 7
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 3uus_E* 1yfd_A 1piy_A 1r65_A 2xof_A* 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A ...
Probab=99.20 E-value=4.8e-12 Score=94.06 Aligned_cols=46 Identities=11% Similarity=0.041 Sum_probs=21.6
Q ss_pred HHHHHcCCCcccC-CCCCcchhhhcc-c-cccccchhhhhhhhhhcccc
Q psy7988 14 ALTRYCFVLQHYF-AENPFDFMENIS-L-EGKTNFFERKVGEYQKSSVM 59 (73)
Q Consensus 14 ~ll~~lG~~kiY~-~~NPf~Wme~is-~-~~ktNFFE~rVt~Yqk~~~~ 59 (73)
.+|.+||++++|. +.||+|||+... . .+++||||+||++|+++++.
T Consensus 314 ~rL~~LG~~~~y~~~~nP~~w~~~~~~~~~~~~nFFE~~~t~Y~~~~~~ 362 (375)
T 1mxr_A 314 IRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 362 (375)
T ss_dssp HHHHHTTCCCCSCCCCCSCGGGGGTC-----------------------
T ss_pred HHHHhcCCCCCCCCCCCCHHHHHHHHhhcccccCCCccCcchhhhcccc
Confidence 3799999999996 599999998753 2 46899999999999999865
No 8
>4dr0_A Ribonucleoside-diphosphate reductase subunit beta; ribonucleotide reductase, manganese, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.15 E-value=6.2e-12 Score=93.29 Aligned_cols=54 Identities=19% Similarity=0.241 Sum_probs=20.1
Q ss_pred HHHHHcCCCcccCC--CCCcchhhhcccccc-ccchhhhhhhhhhccccccCCCceeee
Q psy7988 14 ALTRYCFVLQHYFA--ENPFDFMENISLEGK-TNFFERKVGEYQKSSVMADQDNQVFRL 69 (73)
Q Consensus 14 ~ll~~lG~~kiY~~--~NPf~Wme~is~~~k-tNFFE~rVt~Yqk~~~~~~~~~~~f~~ 69 (73)
.+|.+||++++|++ .||+ ||+.++..+| +||||+||++|+++++.. ..+..|.|
T Consensus 287 ~~L~~LG~~~~y~~~~~nP~-~~~~~~~~~k~~nFFE~r~t~Y~k~~~~~-~~d~d~~f 343 (350)
T 4dr0_A 287 KALMNLGFDPYFEEEDINPI-VLNGLNTKTKSHDFFSMKGNGYKKATVEP-LKDDDFYF 343 (350)
T ss_dssp HHHHHTTCCCCSCCCCCCHH-HHHTC---------------------------------
T ss_pred HHHHHcCCCCCCCCCCCCch-HHHhcccccCcCCCCcCchhhhhhccccc-CCccceec
Confidence 47999999999976 6999 8888877665 599999999999998753 34556666
No 9
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=99.06 E-value=2.1e-11 Score=89.10 Aligned_cols=46 Identities=15% Similarity=0.107 Sum_probs=19.3
Q ss_pred HHHHHcCCCcccCC----CCCcchhhhccc--cccccchhhhhhhhhhccccc
Q psy7988 14 ALTRYCFVLQHYFA----ENPFDFMENISL--EGKTNFFERKVGEYQKSSVMA 60 (73)
Q Consensus 14 ~ll~~lG~~kiY~~----~NPf~Wme~is~--~~ktNFFE~rVt~Yqk~~~~~ 60 (73)
.+|.+||++++|++ .||+.|+ .++. .+++||||+||++|+++++.+
T Consensus 260 ~~L~~lG~~~~f~~~~~~~nP~~~~-~~~~~~~~~~nFFe~r~~~Y~~~~~~~ 311 (319)
T 3n37_A 260 KALMNLGYEPLFPAEMAEVNPAILA-ALSPNADENHDFFSGSGSSYVMGKAVE 311 (319)
T ss_dssp HHHHHTTCCCCSCGGGCCCCHHHHH-HHCC-----------------------
T ss_pred HHHHHCCCCCCCCCCCCCCCcccHH-hhccCccccCCCCCCChhhhhcCCCcc
Confidence 47999999999987 6777655 4555 489999999999999998754
No 10
>4a58_A Ribonucleoside-diphosphate reductase small chain; oxidoreductase, epstein-BARR virus, R2 subunit; 1.68A {Human herpesvirus 4} PDB: 4a5c_A 4a5d_A 4a5e_A 4a5f_A 4a5h_A 4a5i_A 4a5j_A
Probab=99.05 E-value=4.2e-11 Score=87.99 Aligned_cols=44 Identities=18% Similarity=0.138 Sum_probs=14.6
Q ss_pred HHHHHcCCCcccCCCCCc-chhhhccccccccchhhhhhhhhhcc
Q psy7988 14 ALTRYCFVLQHYFAENPF-DFMENISLEGKTNFFERKVGEYQKSS 57 (73)
Q Consensus 14 ~ll~~lG~~kiY~~~NPf-~Wme~is~~~ktNFFE~rVt~Yqk~~ 57 (73)
.+|.+||++++|+++||+ .||..++..+|+||||+||++|+|+-
T Consensus 276 ~~L~~LG~~~~y~~~~p~~np~~~~~~~~~~nFFe~r~~~Y~k~~ 320 (324)
T 4a58_A 276 RILGDIGQAPLYGTPPPKDCPLTYMTSIKQTNFFEQESSDYTMLV 320 (324)
T ss_dssp HHHHHTTCCCSSCCCCC----------------------------
T ss_pred HHHHHCCCCCCCCCCCCCCCcchhhccCccCCCCCCchhhccchh
Confidence 479999999999887654 34444445789999999999999865
No 11
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A
Probab=99.00 E-value=5.3e-11 Score=87.35 Aligned_cols=46 Identities=11% Similarity=0.052 Sum_probs=18.5
Q ss_pred HHHHHcCCCcccCC----CCCcchhhhccc--cccccchhhhhhhhhhccccc
Q psy7988 14 ALTRYCFVLQHYFA----ENPFDFMENISL--EGKTNFFERKVGEYQKSSVMA 60 (73)
Q Consensus 14 ~ll~~lG~~kiY~~----~NPf~Wme~is~--~~ktNFFE~rVt~Yqk~~~~~ 60 (73)
.+|.+||++++|++ .||+.|+ .++. .+++||||+||++|+++++..
T Consensus 270 ~~L~~lG~~~~y~~~~~~~nP~~~~-~~~~~~~~~~nFFe~r~t~Y~~~~~~~ 321 (329)
T 3dhz_A 270 KALNNLGYEGLFPTDETKVSPAILS-SLSPNADENHDFFSGSGSSYVIGKAED 321 (329)
T ss_dssp HHHHHTTCCCSSCGGGCCCCHHHHH-HHC------------------------
T ss_pred HHHHHCCCCCCCCCCCCCCCcccHH-HhccCccccCCCCCCChhhhhcCCccc
Confidence 47999999999987 6776665 4454 489999999999999998654
No 12
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=97.64 E-value=1.7e-05 Score=57.04 Aligned_cols=21 Identities=38% Similarity=0.456 Sum_probs=19.8
Q ss_pred HHHHHcCCCcccCCCCCcchh
Q psy7988 14 ALTRYCFVLQHYFAENPFDFM 34 (73)
Q Consensus 14 ~ll~~lG~~kiY~~~NPf~Wm 34 (73)
.+|.+||++++|+++||||||
T Consensus 266 ~~L~~lG~~~~f~~~nP~~~m 286 (286)
T 3olj_A 266 RLMLELGFSKVFRVENPFDFM 286 (286)
T ss_dssp HHHHHHTCCCSSCCCCCCTTC
T ss_pred HHHHHCCCCCCCCCCCCCCCC
Confidence 479999999999999999998
No 13
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=97.60 E-value=2.3e-05 Score=57.02 Aligned_cols=23 Identities=26% Similarity=0.408 Sum_probs=21.0
Q ss_pred HHHHHcCCCcccCCCCCcchhhh
Q psy7988 14 ALTRYCFVLQHYFAENPFDFMEN 36 (73)
Q Consensus 14 ~ll~~lG~~kiY~~~NPf~Wme~ 36 (73)
.+|.+||++++|+++||||||+.
T Consensus 289 ~~L~~LG~~~~y~~~nP~~wm~~ 311 (311)
T 2o1z_A 289 RLLECLGSPKIFHAKNPFNWMDL 311 (311)
T ss_dssp HHHHHTTCCCSSCCCCCCTTTTC
T ss_pred HHHHHCCCCCCCCCCCCcchhcC
Confidence 37999999999999999999974
No 14
>3lph_A Protein REV; helix-loop-helix, RNA-binding arginine rich motif, protein oligomerization, AIDS, HOST cytoplasm, HOST nucleus; 2.50A {Human immunodeficiency virus type 1}
Probab=37.73 E-value=1.7 Score=26.03 Aligned_cols=32 Identities=22% Similarity=0.241 Sum_probs=18.1
Q ss_pred cCCCCCcchHHHHHHcCCCcccCCCCCcchhh
Q psy7988 4 HAGKSRTHDLALTRYCFVLQHYFAENPFDFME 35 (73)
Q Consensus 4 ~~~~~~~~~~~ll~~lG~~kiY~~~NPf~Wme 35 (73)
.||.|.--|..||+.+-+=|+-...||.|=-+
T Consensus 3 MAGrsgd~de~Ll~~vRiIkiLyQSNP~P~p~ 34 (72)
T 3lph_A 3 MAGRSGDSDEDSLKAVRLIKFLYQSNPPPNPE 34 (72)
T ss_dssp --------CCHHHHHHHHHHHHHHTCCCCCCC
T ss_pred CccCCCCcHHHHHHHHHHHHHHHccCCCCCCC
Confidence 57888777888999998777656679987433
No 15
>2x7l_M HIV REV; nuclear export, immune system, post-transcriptional regulation; 3.17A {Human immunodeficiency virus type 3}
Probab=34.14 E-value=3.3 Score=26.73 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=19.1
Q ss_pred CCCCCcchHHHHHHcCCCcccCCCCCcchhhh
Q psy7988 5 AGKSRTHDLALTRYCFVLQHYFAENPFDFMEN 36 (73)
Q Consensus 5 ~~~~~~~~~~ll~~lG~~kiY~~~NPf~Wme~ 36 (73)
||.|-.-|..||+++-+=|+-...||+|=-+-
T Consensus 1 aGrsgd~deeLl~~vRiIkiLyQSNPyP~peG 32 (115)
T 2x7l_M 1 AGRSGDSDEDLLKAVRLIKFLYQSNPPPNPEG 32 (115)
T ss_dssp -------CHHHHHHHHHHHHHHHSSCCCCCCC
T ss_pred CCCCcccHHHHHHHHHHHHHHHccCCCCCCCC
Confidence 67787778999999987777566799874443
No 16
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*
Probab=30.88 E-value=18 Score=25.62 Aligned_cols=14 Identities=0% Similarity=-0.368 Sum_probs=12.1
Q ss_pred HHHHHcCCCcccCC
Q psy7988 14 ALTRYCFVLQHYFA 27 (73)
Q Consensus 14 ~ll~~lG~~kiY~~ 27 (73)
.+|.+||++++|++
T Consensus 269 ~~L~~LG~~~~y~~ 282 (296)
T 3mjo_A 269 KALNNLGYEGLFPT 282 (296)
T ss_dssp HHHHHTTCCCSSCG
T ss_pred HHHHHCCCCCCCCC
Confidence 47999999999964
Done!