Your job contains 1 sequence.
>psy7990
MCSALFLSTQYWEHQGPGVRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNL
RKAASSATAPTEEDEE
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7990
(76 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0010408 - symbol:RpS9 "Ribosomal protein S9" speci... 215 1.2e-17 1
UNIPROTKB|A6QLG5 - symbol:RPS9 "40S ribosomal protein S9"... 211 3.2e-17 1
UNIPROTKB|E2R8R8 - symbol:RPS9 "Uncharacterized protein" ... 211 3.2e-17 1
UNIPROTKB|P46781 - symbol:RPS9 "40S ribosomal protein S9"... 211 3.2e-17 1
UNIPROTKB|I3LEX0 - symbol:RPS9 "40S ribosomal protein S9"... 211 3.2e-17 1
UNIPROTKB|A9L913 - symbol:RPS9 "40S ribosomal protein S9"... 211 3.2e-17 1
MGI|MGI:1924096 - symbol:Rps9 "ribosomal protein S9" spec... 211 3.2e-17 1
RGD|619889 - symbol:Rps9 "ribosomal protein S9" species:1... 211 3.2e-17 1
ZFIN|ZDB-GENE-010724-15 - symbol:rps9 "ribosomal protein ... 208 6.7e-17 1
RGD|1566136 - symbol:RGD1566136 "similar to 40S ribosomal... 198 7.7e-16 1
ASPGD|ASPL0000071451 - symbol:AN4803 species:162425 "Emer... 188 8.8e-15 1
TAIR|locus:2150976 - symbol:AT5G15200 species:3702 "Arabi... 184 2.3e-14 1
WB|WBGene00004478 - symbol:rps-9 species:6239 "Caenorhabd... 184 2.3e-14 1
TAIR|locus:2178082 - symbol:AT5G39850 species:3702 "Arabi... 183 3.0e-14 1
POMBASE|SPBC29A3.12 - symbol:rps902 "40S ribosomal protei... 178 1.0e-13 1
SGD|S000000393 - symbol:RPS9B "Protein component of the s... 178 1.0e-13 1
POMBASE|SPAC24H6.07 - symbol:rps901 "40S ribosomal protei... 177 1.3e-13 1
SGD|S000006002 - symbol:RPS9A "Protein component of the s... 176 1.6e-13 1
UNIPROTKB|F1LY44 - symbol:F1LY44 "Uncharacterized protein... 162 5.0e-12 1
DICTYBASE|DDB_G0289877 - symbol:rps9 "40S ribosomal prote... 117 2.9e-07 1
>FB|FBgn0010408 [details] [associations]
symbol:RpS9 "Ribosomal protein S9" species:7227 "Drosophila
melanogaster" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0005840 "ribosome" evidence=IDA;NAS]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 EMBL:AE014296
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
GO:GO:0000022 GO:GO:0015935 Gene3D:3.10.290.10 eggNOG:COG0522
InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997 OMA:QTIVYRK
TIGRFAMs:TIGR01018 GeneTree:ENSGT00550000074829 CTD:6203
EMBL:X69677 EMBL:AY231798 RefSeq:NP_524004.2 RefSeq:NP_729506.1
UniGene:Dm.6943 ProteinModelPortal:P55935 SMR:P55935 IntAct:P55935
STRING:P55935 PaxDb:P55935 PRIDE:P55935 EnsemblMetazoa:FBtr0076423
EnsemblMetazoa:FBtr0076425 GeneID:39108 KEGG:dme:Dmel_CG3395
FlyBase:FBgn0010408 InParanoid:P55935 OrthoDB:EOG4N2Z52
PhylomeDB:P55935 ChiTaRS:RPS9 GenomeRNAi:39108 NextBio:811958
Bgee:P55935 GermOnline:CG3395 Uniprot:P55935
Length = 195
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 43/58 (74%), Positives = 46/58 (79%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEEDEE 76
VRKQVVNIPSFVVRLDSQKHIDFSL SPFGGG GRVKRKNL+K EE+E+
Sbjct: 138 VRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKKNQGGGGGAAEEEED 195
>UNIPROTKB|A6QLG5 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9913 "Bos
taurus" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0030529 GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 EMBL:BC147956 EMBL:BC148016
IPI:IPI00694565 RefSeq:NP_001094622.1 UniGene:Bt.52718
ProteinModelPortal:A6QLG5 SMR:A6QLG5 STRING:A6QLG5 PRIDE:A6QLG5
Ensembl:ENSBTAT00000008502 GeneID:533892 KEGG:bta:533892 CTD:6203
HOVERGEN:HBG001135 InParanoid:A6QLG5 OrthoDB:EOG4MW876
NextBio:20876183 Uniprot:A6QLG5
Length = 194
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 41/58 (70%), Positives = 47/58 (81%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEEDEE 76
VRKQVVNIPSF+VRLDSQKHIDFSL SP+GGG GRVKRKN +K A A +E+E+
Sbjct: 137 VRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>UNIPROTKB|E2R8R8 [details] [associations]
symbol:RPS9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 CTD:6203 EMBL:AAEX03000741
RefSeq:XP_533590.2 ProteinModelPortal:E2R8R8 SMR:E2R8R8
PRIDE:E2R8R8 Ensembl:ENSCAFT00000004179 GeneID:476387
KEGG:cfa:476387 NextBio:20852054 Uniprot:E2R8R8
Length = 194
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 41/58 (70%), Positives = 47/58 (81%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEEDEE 76
VRKQVVNIPSF+VRLDSQKHIDFSL SP+GGG GRVKRKN +K A A +E+E+
Sbjct: 137 VRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>UNIPROTKB|P46781 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IDA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IMP] [GO:0006412 "translation"
evidence=IC;IMP;TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0045182 "translation
regulator activity" evidence=IMP] [GO:0005840 "ribosome"
evidence=NAS] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0006417 "regulation of translation" evidence=IMP]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 Reactome:REACT_116125 GO:GO:0005730
GO:GO:0000184 GO:GO:0006413 GO:GO:0008284 GO:GO:0045182
GO:GO:0003735 GO:GO:0019843 EMBL:CH471135 GO:GO:0006415
GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0019083 Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 EMBL:CU151838 EMBL:CU457734
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018 CTD:6203
HOVERGEN:HBG001135 OrthoDB:EOG4MW876 ChiTaRS:RPS9 EMBL:U14971
EMBL:AB061839 EMBL:BC000802 EMBL:BC007410 EMBL:BC007434
EMBL:BC007857 EMBL:BC068055 EMBL:BC071940 EMBL:BC096756
EMBL:AB007150 IPI:IPI00221088 PIR:S55917 RefSeq:NP_001004.2
UniGene:Hs.467284 UniGene:Hs.546288 ProteinModelPortal:P46781
SMR:P46781 IntAct:P46781 MINT:MINT-5001013 STRING:P46781
PhosphoSite:P46781 DMDM:20178311 PaxDb:P46781 PeptideAtlas:P46781
PRIDE:P46781 DNASU:6203 Ensembl:ENST00000302907
Ensembl:ENST00000391752 Ensembl:ENST00000391753
Ensembl:ENST00000573353 Ensembl:ENST00000573511
Ensembl:ENST00000574910 Ensembl:ENST00000575726
Ensembl:ENST00000575746 Ensembl:ENST00000576887 GeneID:6203
KEGG:hsa:6203 UCSC:uc002qdx.3 GeneCards:GC19P054828 HGNC:HGNC:10442
HPA:HPA048746 MIM:603631 neXtProt:NX_P46781 PharmGKB:PA34857
InParanoid:P46781 PhylomeDB:P46781 GenomeRNAi:6203 NextBio:24091
ArrayExpress:P46781 Bgee:P46781 CleanEx:HS_RPS9
Genevestigator:P46781 GermOnline:ENSG00000170889 Uniprot:P46781
Length = 194
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 41/58 (70%), Positives = 47/58 (81%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEEDEE 76
VRKQVVNIPSF+VRLDSQKHIDFSL SP+GGG GRVKRKN +K A A +E+E+
Sbjct: 137 VRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>UNIPROTKB|I3LEX0 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9823 "Sus
scrofa" [GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 EMBL:FP476135
Ensembl:ENSSSCT00000027911 Uniprot:I3LEX0
Length = 193
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 41/58 (70%), Positives = 47/58 (81%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEEDEE 76
VRKQVVNIPSF+VRLDSQKHIDFSL SP+GGG GRVKRKN +K A A +E+E+
Sbjct: 136 VRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 193
>UNIPROTKB|A9L913 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9555 "Papio
anubis" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 GO:GO:0006412 GO:GO:0003735
GO:GO:0030529 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
InterPro:IPR022801 PANTHER:PTHR11831 TIGRFAMs:TIGR01018 CTD:6203
HOVERGEN:HBG001135 EMBL:DP000506 RefSeq:NP_001162349.1
UniGene:Pan.54 ProteinModelPortal:A9L913 SMR:A9L913 PRIDE:A9L913
GeneID:100137341 Uniprot:A9L913
Length = 194
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 41/58 (70%), Positives = 47/58 (81%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEEDEE 76
VRKQVVNIPSF+VRLDSQKHIDFSL SP+GGG GRVKRKN +K A A +E+E+
Sbjct: 137 VRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>MGI|MGI:1924096 [details] [associations]
symbol:Rps9 "ribosomal protein S9" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=ISO] [GO:0006417
"regulation of translation" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=ISO]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 MGI:MGI:1924096 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0030529 GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 CTD:6203 HOVERGEN:HBG001135
OrthoDB:EOG4MW876 ChiTaRS:RPS9 EMBL:AK050591 EMBL:AK081889
EMBL:AK150800 EMBL:AK150988 EMBL:AK151029 EMBL:AK151621
EMBL:BC031746 IPI:IPI00420726 RefSeq:NP_084043.1 UniGene:Mm.13944
ProteinModelPortal:Q6ZWN5 SMR:Q6ZWN5 STRING:Q6ZWN5
PhosphoSite:Q6ZWN5 PaxDb:Q6ZWN5 PRIDE:Q6ZWN5
Ensembl:ENSMUST00000006496 Ensembl:ENSMUST00000108625 GeneID:76846
KEGG:mmu:76846 UCSC:uc009ewa.1 InParanoid:Q6ZWN5 NextBio:345919
Bgee:Q6ZWN5 CleanEx:MM_RPS9 Genevestigator:Q6ZWN5
GermOnline:ENSMUSG00000006333 Uniprot:Q6ZWN5
Length = 194
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 41/58 (70%), Positives = 47/58 (81%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEEDEE 76
VRKQVVNIPSF+VRLDSQKHIDFSL SP+GGG GRVKRKN +K A A +E+E+
Sbjct: 137 VRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>RGD|619889 [details] [associations]
symbol:Rps9 "ribosomal protein S9" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006412 "translation" evidence=IEA;ISO]
[GO:0006417 "regulation of translation" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008284 "positive regulation
of cell proliferation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO;IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO;ISS] [GO:0045182 "translation regulator activity"
evidence=ISO] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 RGD:619889
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 GO:GO:0022627
Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 OMA:QTIVYRK
TIGRFAMs:TIGR01018 GeneTree:ENSGT00550000074829 CTD:6203
HOVERGEN:HBG001135 OrthoDB:EOG4MW876 EMBL:X66370 EMBL:BC060560
IPI:IPI00421626 PIR:JN0587 RefSeq:NP_112370.2 RefSeq:XP_003748763.1
UniGene:Rn.109735 UniGene:Rn.225908 ProteinModelPortal:P29314
SMR:P29314 IntAct:P29314 STRING:P29314 PRIDE:P29314
Ensembl:ENSRNOT00000015234 GeneID:100909466 GeneID:81772
KEGG:rno:100909466 KEGG:rno:81772 UCSC:RGD:619889 InParanoid:P29314
NextBio:615589 ArrayExpress:P29314 Genevestigator:P29314
GermOnline:ENSRNOG00000011355 Uniprot:P29314
Length = 194
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 41/58 (70%), Positives = 47/58 (81%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEEDEE 76
VRKQVVNIPSF+VRLDSQKHIDFSL SP+GGG GRVKRKN +K A A +E+E+
Sbjct: 137 VRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>ZFIN|ZDB-GENE-010724-15 [details] [associations]
symbol:rps9 "ribosomal protein S9" species:7955
"Danio rerio" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 ZFIN:ZDB-GENE-010724-15 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
EMBL:BX511250 HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 CTD:6203 HOVERGEN:HBG001135
EMBL:CU693477 EMBL:BC059492 EMBL:BC062833 IPI:IPI00487430
RefSeq:NP_957146.1 UniGene:Dr.75119 STRING:Q6P5M3
Ensembl:ENSDART00000129698 GeneID:114420 KEGG:dre:114420
InParanoid:Q6P5M3 NextBio:20796909 Uniprot:Q6P5M3
Length = 194
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEEDEE 76
VRKQVVNIPSFVVRLDSQKHIDFSL SP+GGG GRVKRKN +KA +E+E+
Sbjct: 137 VRKQVVNIPSFVVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKAQGGGGGGDDEEED 194
>RGD|1566136 [details] [associations]
symbol:RGD1566136 "similar to 40S ribosomal protein S9"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] InterPro:IPR001912
InterPro:IPR002942 InterPro:IPR005710 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 RGD:1566136 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
InterPro:IPR022801 PANTHER:PTHR11831 TIGRFAMs:TIGR01018 OMA:QDFMERR
GeneTree:ENSGT00550000074829 OrthoDB:EOG4MW876 IPI:IPI00368950
RefSeq:XP_001056883.1 RefSeq:XP_213106.1 PRIDE:D3ZV50
Ensembl:ENSRNOT00000060001 GeneID:300278 KEGG:rno:300278 CTD:300278
NextBio:646699 Uniprot:D3ZV50
Length = 194
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 39/58 (67%), Positives = 45/58 (77%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEEDEE 76
VRKQVVNIPSF+V LDS KHIDFSL SP+GGG GRVKRKN +K A A +E+E+
Sbjct: 137 VRKQVVNIPSFIVCLDSHKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>ASPGD|ASPL0000071451 [details] [associations]
symbol:AN4803 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0045903
"positive regulation of translational fidelity" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 GO:GO:0006412 GO:GO:0003735
EMBL:BN001303 GO:GO:0019843 EMBL:AACD01000081 GO:GO:0015935
Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 OMA:QTIVYRK
TIGRFAMs:TIGR01018 OrthoDB:EOG4Q886R RefSeq:XP_662407.1
ProteinModelPortal:Q5B3S7 STRING:Q5B3S7
EnsemblFungi:CADANIAT00005618 GeneID:2872602 KEGG:ani:AN4803.2
Uniprot:Q5B3S7
Length = 193
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 37/58 (63%), Positives = 43/58 (74%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEEDEE 76
V KQ+VN+PS++VRLDSQKHIDF+L SPFGGG GRV+RK AA EEDEE
Sbjct: 136 VGKQIVNVPSYMVRLDSQKHIDFALTSPFGGGRPGRVQRKKAAAAAGGGDDEGEEDEE 193
>TAIR|locus:2150976 [details] [associations]
symbol:AT5G15200 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0009506
GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0009507 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:AL353993 GO:GO:0022627 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
EMBL:BT010847 EMBL:BT011315 EMBL:AK228437 IPI:IPI00534338
PIR:T49955 RefSeq:NP_197024.1 UniGene:At.1767
ProteinModelPortal:Q9LXG1 SMR:Q9LXG1 STRING:Q9LXG1 PaxDb:Q9LXG1
PRIDE:Q9LXG1 EnsemblPlants:AT5G15200.1 GeneID:831372
KEGG:ath:AT5G15200 TAIR:At5g15200 HOGENOM:HOG000194525
InParanoid:Q9LXG1 OMA:QTIVYRK PhylomeDB:Q9LXG1 ProtClustDB:PLN00189
Genevestigator:Q9LXG1 GermOnline:AT5G15200 TIGRFAMs:TIGR01018
Uniprot:Q9LXG1
Length = 198
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 36/56 (64%), Positives = 44/56 (78%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEED 74
V KQ+VNIPSF+VRLDSQKHIDF+L SPFGGG GRVKR+N + A+ A+ + D
Sbjct: 138 VGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEKSASKKASGGGDAD 193
>WB|WBGene00004478 [details] [associations]
symbol:rps-9 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0032502
"developmental process" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 GO:GO:0010171 GO:GO:0000003
GO:GO:0003735 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 EMBL:Z69302 PIR:T22034
RefSeq:NP_496384.1 ProteinModelPortal:Q20228 SMR:Q20228
DIP:DIP-25908N MINT:MINT-1122534 STRING:Q20228 PaxDb:Q20228
PRIDE:Q20228 EnsemblMetazoa:F40F8.10.1 EnsemblMetazoa:F40F8.10.2
GeneID:174699 KEGG:cel:CELE_F40F8.10 UCSC:F40F8.10.1 CTD:174699
WormBase:F40F8.10 InParanoid:Q20228 NextBio:885126 Uniprot:Q20228
Length = 189
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEE 73
VR+QVV++PSF+VRLDSQKHIDFSL SP+GGG GRVKR+ LRK A EE
Sbjct: 136 VRRQVVDVPSFIVRLDSQKHIDFSLQSPYGGGRPGRVKRRTLRKG-DGAGGDDEE 189
>TAIR|locus:2178082 [details] [associations]
symbol:AT5G39850 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005829
GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016020
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 GO:GO:0015935
EMBL:AB010077 Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525
ProtClustDB:PLN00189 TIGRFAMs:TIGR01018 EMBL:BT024915 EMBL:AY088109
IPI:IPI00526550 RefSeq:NP_198801.1 UniGene:At.43632
ProteinModelPortal:Q9FLF0 SMR:Q9FLF0 STRING:Q9FLF0 PaxDb:Q9FLF0
PRIDE:Q9FLF0 EnsemblPlants:AT5G39850.1 GeneID:833981
KEGG:ath:AT5G39850 TAIR:At5g39850 InParanoid:Q9FLF0 OMA:RTKRELW
PhylomeDB:Q9FLF0 Genevestigator:Q9FLF0 GermOnline:AT5G39850
Uniprot:Q9FLF0
Length = 197
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPT--EEDEE 76
V +Q+VNIPSF+VR++SQKH+DFSL SPFGGG GRVKR+N R A A+ E+DEE
Sbjct: 138 VGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNERAGAKKASGGDGDEDDEE 197
>POMBASE|SPBC29A3.12 [details] [associations]
symbol:rps902 "40S ribosomal protein S9 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 PomBase:SPBC29A3.12 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 OMA:QTIVYRK
TIGRFAMs:TIGR01018 EMBL:AB027929 OrthoDB:EOG4Q886R EMBL:AB029515
PIR:T40083 PIR:T43516 RefSeq:NP_595840.1 ProteinModelPortal:O59675
STRING:O59675 PRIDE:O59675 EnsemblFungi:SPBC29A3.12.1
GeneID:2540367 KEGG:spo:SPBC29A3.12 NextBio:20801495 Uniprot:O59675
Length = 192
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 34/57 (59%), Positives = 41/57 (71%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEEDE 75
V KQ+VN+PSFVVRLD+QKHIDF+L+SP+GGG GR KRK LR E+E
Sbjct: 136 VGKQIVNVPSFVVRLDAQKHIDFALSSPYGGGRPGRCKRKRLRSQQEGGEGEEAEEE 192
>SGD|S000000393 [details] [associations]
symbol:RPS9B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0045903 "positive regulation of translational fidelity"
evidence=IMP] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 SGD:S000000393
GO:GO:0005730 GO:GO:0006412 EMBL:BK006936 GO:GO:0003735
RefSeq:NP_009753.3 GeneID:852493 KEGG:sce:YBR194W GO:GO:0019843
GO:GO:0030686 GO:GO:0032040 GO:GO:0045903 GO:GO:0000462
GO:GO:0022627 EMBL:U02073 Gene3D:3.10.290.10 eggNOG:COG0522
InterPro:IPR022801 PANTHER:PTHR11831 RefSeq:NP_009748.3
GeneID:852487 KEGG:sce:YBR189W KO:K02997 HOGENOM:HOG000194525
OMA:QTIVYRK TIGRFAMs:TIGR01018 OrthoDB:EOG4Q886R
GeneTree:ENSGT00550000074829 EMBL:M88650 EMBL:Z36058 PIR:S31287
ProteinModelPortal:P05755 SMR:P05755 IntAct:P05755
MINT:MINT-2786155 STRING:P05755 PaxDb:P05755 PeptideAtlas:P05755
EnsemblFungi:YBR189W NextBio:971471 Genevestigator:P05755
GermOnline:YBR189W Uniprot:P05755
Length = 195
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 39/60 (65%), Positives = 45/60 (75%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNL-RKAASSATAPTE-EDEE 76
V KQ+VNIPSF+VRLDS+KHIDF+ SPFGG GRV R+N RKA +S A E EDEE
Sbjct: 136 VGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRNAARKAEASGEAAEEAEDEE 195
>POMBASE|SPAC24H6.07 [details] [associations]
symbol:rps901 "40S ribosomal protein S9" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 PomBase:SPAC24H6.07 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 TIGRFAMs:TIGR01018
EMBL:AB027929 EMBL:AB011008 PIR:S62409 PIR:T43321
RefSeq:NP_592945.1 ProteinModelPortal:Q09757 STRING:Q09757
PRIDE:Q09757 EnsemblFungi:SPAC24H6.07.1 GeneID:2542629
KEGG:spo:SPAC24H6.07 OMA:QDFMERR OrthoDB:EOG4Q886R NextBio:20803678
Uniprot:Q09757
Length = 191
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEED 74
V KQ+VN+PSFVVRLD+QKHIDF+L+SP+GGG GR KRK LR EE+
Sbjct: 136 VGKQIVNVPSFVVRLDTQKHIDFALSSPYGGGRPGRCKRKRLRSQEGGEGEEAEEE 191
>SGD|S000006002 [details] [associations]
symbol:RPS9A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IGI] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA;IMP;IDA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IDA] [GO:0002181 "cytoplasmic
translation" evidence=IC] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 SGD:S000006002
GO:GO:0005730 EMBL:BK006949 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 EMBL:U41849 GO:GO:0030686 GO:GO:0032040 GO:GO:0000462
PDB:1S1H PDBsum:1S1H GO:GO:0022627 PDB:3IZB PDB:3O2Z PDB:3O30
PDB:3U5C PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3U5C
PDBsum:3U5G Gene3D:3.10.290.10 InterPro:IPR022801 PANTHER:PTHR11831
KO:K02997 PDB:1K5X PDBsum:1K5X HOGENOM:HOG000194525
TIGRFAMs:TIGR01018 OMA:RTKRELW OrthoDB:EOG4Q886R EMBL:D00724
PIR:S16822 RefSeq:NP_015244.1 ProteinModelPortal:O13516 SMR:O13516
IntAct:O13516 MINT:MINT-2786178 STRING:O13516 PeptideAtlas:O13516
PRIDE:O13516 EnsemblFungi:YPL081W GeneID:856024 KEGG:sce:YPL081W
GeneTree:ENSGT00550000074829 EvolutionaryTrace:O13516
NextBio:980938 Genevestigator:O13516 GermOnline:YPL081W
Uniprot:O13516
Length = 197
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 37/58 (63%), Positives = 43/58 (74%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNL-RKAASSATAPTEEDE 75
V KQ+VNIPSF+VRLDS+KHIDF+ SPFGG GRV R+N RKA +S A E DE
Sbjct: 136 VGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRNAARKAEASGEAADEADE 193
>UNIPROTKB|F1LY44 [details] [associations]
symbol:F1LY44 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 Pfam:PF00163 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 TIGRFAMs:TIGR01018 IPI:IPI00370527
Ensembl:ENSRNOT00000048196 Uniprot:F1LY44
Length = 189
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 35/57 (61%), Positives = 41/57 (71%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAASSATAPTEEDE 75
VRKQVVN+ +VRLDSQKHIDFSL S + GG GRVKRKN +K A A +E+E
Sbjct: 134 VRKQVVNV---IVRLDSQKHIDFSLRSYYSGGRPGRVKRKNAKKGQGGAGAGDDEEE 187
>DICTYBASE|DDB_G0289877 [details] [associations]
symbol:rps9 "40S ribosomal protein S9" species:44689
"Dictyostelium discoideum" [GO:0031982 "vesicle" evidence=IDA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001912
InterPro:IPR002942 InterPro:IPR005710 InterPro:IPR018079
Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632 PROSITE:PS50889
SMART:SM00363 dictyBase:DDB_G0289877 GO:GO:0006412
GenomeReviews:CM000154_GR GO:GO:0003735 EMBL:AAFI02000149
GO:GO:0031982 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
TIGRFAMs:TIGR01018 OMA:QDFMERR EMBL:X06636 EMBL:X15384 PIR:S01093
RefSeq:XP_635999.1 ProteinModelPortal:P14132 STRING:P14132
PRIDE:P14132 EnsemblProtists:DDB0191528 GeneID:8627414
KEGG:ddi:DDB_G0289877 ProtClustDB:PTZ00155 Uniprot:P14132
Length = 185
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 19 VRKQVVNIPSFVVRLDSQKHIDFSLNSPFGGGGTGRVKRKNLRKAAS 65
V KQ+VN+PSF+VR++SQKH+ + SP GG GR RK + +S
Sbjct: 133 VGKQLVNVPSFLVRVESQKHLGLASTSPLAGGRPGRRARKMAKNNSS 179
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 76 76 0.00091 102 3 11 23 0.41 29
29 0.48 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 523 (56 KB)
Total size of DFA: 99 KB (2070 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.59u 0.09s 9.68t Elapsed: 00:00:20
Total cpu time: 9.59u 0.09s 9.68t Elapsed: 00:00:20
Start: Thu Aug 15 14:36:48 2013 End: Thu Aug 15 14:37:08 2013