Your job contains 1 sequence.
>psy7992
MVNNRVPSVHSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE
LLTLDEKEHRNALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIH
HARVLIRQRHI
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7992
(131 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0010408 - symbol:RpS9 "Ribosomal protein S9" speci... 602 1.2e-58 1
UNIPROTKB|A6QLG5 - symbol:RPS9 "40S ribosomal protein S9"... 543 2.1e-52 1
UNIPROTKB|E2R8R8 - symbol:RPS9 "Uncharacterized protein" ... 543 2.1e-52 1
UNIPROTKB|B5MCT8 - symbol:RPS9 "40S ribosomal protein S9"... 543 2.1e-52 1
UNIPROTKB|C9JM19 - symbol:RPS9 "Ribosomal protein S9, iso... 543 2.1e-52 1
UNIPROTKB|P46781 - symbol:RPS9 "40S ribosomal protein S9"... 543 2.1e-52 1
UNIPROTKB|A9L913 - symbol:RPS9 "40S ribosomal protein S9"... 543 2.1e-52 1
MGI|MGI:1924096 - symbol:Rps9 "ribosomal protein S9" spec... 543 2.1e-52 1
RGD|2320851 - symbol:LOC100364509 "ribosomal protein S9-l... 543 2.1e-52 1
RGD|619889 - symbol:Rps9 "ribosomal protein S9" species:1... 543 2.1e-52 1
ZFIN|ZDB-GENE-010724-15 - symbol:rps9 "ribosomal protein ... 541 3.5e-52 1
UNIPROTKB|Q29197 - symbol:RPS9 "40S ribosomal protein S9"... 516 1.5e-49 1
RGD|1566136 - symbol:RGD1566136 "similar to 40S ribosomal... 516 1.5e-49 1
ASPGD|ASPL0000071451 - symbol:AN4803 species:162425 "Emer... 509 8.5e-49 1
WB|WBGene00004478 - symbol:rps-9 species:6239 "Caenorhabd... 500 7.7e-48 1
UNIPROTKB|I3LEX0 - symbol:RPS9 "40S ribosomal protein S9"... 481 7.9e-46 1
POMBASE|SPBC29A3.12 - symbol:rps902 "40S ribosomal protei... 480 1.0e-45 1
POMBASE|SPAC24H6.07 - symbol:rps901 "40S ribosomal protei... 477 2.1e-45 1
SGD|S000000393 - symbol:RPS9B "Protein component of the s... 466 3.1e-44 1
SGD|S000006002 - symbol:RPS9A "Protein component of the s... 463 6.4e-44 1
UNIPROTKB|F1LY44 - symbol:F1LY44 "Uncharacterized protein... 453 7.3e-43 1
DICTYBASE|DDB_G0289877 - symbol:rps9 "40S ribosomal prote... 446 4.0e-42 1
TAIR|locus:2178082 - symbol:AT5G39850 species:3702 "Arabi... 442 1.1e-41 1
TAIR|locus:2150976 - symbol:AT5G15200 species:3702 "Arabi... 440 1.7e-41 1
RGD|1594500 - symbol:LOC365692 "similar to ribosomal prot... 316 2.4e-28 1
UNIPROTKB|A8MXK4 - symbol:RPS9 "40S ribosomal protein S9"... 273 8.7e-24 1
UNIPROTKB|F2Z3C0 - symbol:RPS9 "40S ribosomal protein S9"... 273 8.7e-24 1
RGD|1306825 - symbol:Imp3 "IMP3, U3 small nucleolar ribon... 109 2.2e-06 1
ZFIN|ZDB-GENE-040426-1062 - symbol:imp3 "IMP3, U3 small n... 101 2.0e-05 1
MGI|MGI:1916119 - symbol:Imp3 "IMP3, U3 small nucleolar r... 100 2.7e-05 1
UNIPROTKB|F1MZR5 - symbol:IMP3 "U3 small nucleolar ribonu... 96 7.9e-05 1
UNIPROTKB|Q9NV31 - symbol:IMP3 "U3 small nucleolar ribonu... 96 7.9e-05 1
UNIPROTKB|Q3T0M3 - symbol:IMP3 "U3 small nucleolar ribonu... 95 0.00021 1
UNIPROTKB|F1SJ73 - symbol:IMP3 "Uncharacterized protein" ... 94 0.00041 1
>FB|FBgn0010408 [details] [associations]
symbol:RpS9 "Ribosomal protein S9" species:7227 "Drosophila
melanogaster" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0005840 "ribosome" evidence=IDA;NAS]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 EMBL:AE014296
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
GO:GO:0000022 GO:GO:0015935 Gene3D:3.10.290.10 eggNOG:COG0522
InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997 OMA:QTIVYRK
TIGRFAMs:TIGR01018 GeneTree:ENSGT00550000074829 CTD:6203
EMBL:X69677 EMBL:AY231798 RefSeq:NP_524004.2 RefSeq:NP_729506.1
UniGene:Dm.6943 ProteinModelPortal:P55935 SMR:P55935 IntAct:P55935
STRING:P55935 PaxDb:P55935 PRIDE:P55935 EnsemblMetazoa:FBtr0076423
EnsemblMetazoa:FBtr0076425 GeneID:39108 KEGG:dme:Dmel_CG3395
FlyBase:FBgn0010408 InParanoid:P55935 OrthoDB:EOG4N2Z52
PhylomeDB:P55935 ChiTaRS:RPS9 GenomeRNAi:39108 NextBio:811958
Bgee:P55935 GermOnline:CG3395 Uniprot:P55935
Length = 195
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 123/136 (90%), Positives = 127/136 (93%)
Query: 1 MVNNRVPSVHSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60
MVN R+PSV SKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE
Sbjct: 1 MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60
Query: 61 LLTLDEKEHR-----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGL 115
LLTLDEK+ + NALLRRLVRIGVLDES+MKLDYV GLKIEDFLERRLQTQVFKLGL
Sbjct: 61 LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120
Query: 116 AKSIHHARVLIRQRHI 131
AKSIHHARVLIRQRHI
Sbjct: 121 AKSIHHARVLIRQRHI 136
>UNIPROTKB|A6QLG5 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9913 "Bos
taurus" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0030529 GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 EMBL:BC147956 EMBL:BC148016
IPI:IPI00694565 RefSeq:NP_001094622.1 UniGene:Bt.52718
ProteinModelPortal:A6QLG5 SMR:A6QLG5 STRING:A6QLG5 PRIDE:A6QLG5
Ensembl:ENSBTAT00000008502 GeneID:533892 KEGG:bta:533892 CTD:6203
HOVERGEN:HBG001135 InParanoid:A6QLG5 OrthoDB:EOG4MW876
NextBio:20876183 Uniprot:A6QLG5
Length = 194
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 110/125 (88%), Positives = 116/125 (92%)
Query: 12 KTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHR- 70
KTYVTPRRP+EK+RLDQELK+IGEYGLRNKREVWRVK+ LAKIRKAARELLTLDEK+ R
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 71 ----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 126
NALLRRLVRIGVLDE KMKLDY+ GLKIEDFLERRLQTQVFKLGLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 127 RQRHI 131
RQRHI
Sbjct: 131 RQRHI 135
>UNIPROTKB|E2R8R8 [details] [associations]
symbol:RPS9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 CTD:6203 EMBL:AAEX03000741
RefSeq:XP_533590.2 ProteinModelPortal:E2R8R8 SMR:E2R8R8
PRIDE:E2R8R8 Ensembl:ENSCAFT00000004179 GeneID:476387
KEGG:cfa:476387 NextBio:20852054 Uniprot:E2R8R8
Length = 194
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 110/125 (88%), Positives = 116/125 (92%)
Query: 12 KTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHR- 70
KTYVTPRRP+EK+RLDQELK+IGEYGLRNKREVWRVK+ LAKIRKAARELLTLDEK+ R
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 71 ----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 126
NALLRRLVRIGVLDE KMKLDY+ GLKIEDFLERRLQTQVFKLGLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 127 RQRHI 131
RQRHI
Sbjct: 131 RQRHI 135
>UNIPROTKB|B5MCT8 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
EMBL:CH471135 GO:GO:0015935 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 EMBL:AC010492 EMBL:AC012314 HOGENOM:HOG000194525
TIGRFAMs:TIGR01018 HOVERGEN:HBG001135 ChiTaRS:RPS9
UniGene:Hs.467284 UniGene:Hs.546288 HGNC:HGNC:10442 IPI:IPI00879238
SMR:B5MCT8 STRING:B5MCT8 Ensembl:ENST00000402367
Ensembl:ENST00000436445 Ensembl:ENST00000445961 Uniprot:B5MCT8
Length = 139
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 110/125 (88%), Positives = 116/125 (92%)
Query: 12 KTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHR- 70
KTYVTPRRP+EK+RLDQELK+IGEYGLRNKREVWRVK+ LAKIRKAARELLTLDEK+ R
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 71 ----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 126
NALLRRLVRIGVLDE KMKLDY+ GLKIEDFLERRLQTQVFKLGLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 127 RQRHI 131
RQRHI
Sbjct: 131 RQRHI 135
>UNIPROTKB|C9JM19 [details] [associations]
symbol:RPS9 "Ribosomal protein S9, isoform CRA_e"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
EMBL:CH471135 GO:GO:0015935 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 EMBL:AC010492 EMBL:AC012314 HOGENOM:HOG000194525
TIGRFAMs:TIGR01018 ChiTaRS:RPS9 UniGene:Hs.467284 UniGene:Hs.546288
HGNC:HGNC:10442 IPI:IPI00925580 SMR:C9JM19 STRING:C9JM19
Ensembl:ENST00000441429 UCSC:uc002qeb.3 Uniprot:C9JM19
Length = 156
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 110/125 (88%), Positives = 116/125 (92%)
Query: 12 KTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHR- 70
KTYVTPRRP+EK+RLDQELK+IGEYGLRNKREVWRVK+ LAKIRKAARELLTLDEK+ R
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 71 ----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 126
NALLRRLVRIGVLDE KMKLDY+ GLKIEDFLERRLQTQVFKLGLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 127 RQRHI 131
RQRHI
Sbjct: 131 RQRHI 135
>UNIPROTKB|P46781 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IDA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IMP] [GO:0006412 "translation"
evidence=IC;IMP;TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0045182 "translation
regulator activity" evidence=IMP] [GO:0005840 "ribosome"
evidence=NAS] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0006417 "regulation of translation" evidence=IMP]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 Reactome:REACT_116125 GO:GO:0005730
GO:GO:0000184 GO:GO:0006413 GO:GO:0008284 GO:GO:0045182
GO:GO:0003735 GO:GO:0019843 EMBL:CH471135 GO:GO:0006415
GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0019083 Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 EMBL:CU151838 EMBL:CU457734
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018 CTD:6203
HOVERGEN:HBG001135 OrthoDB:EOG4MW876 ChiTaRS:RPS9 EMBL:U14971
EMBL:AB061839 EMBL:BC000802 EMBL:BC007410 EMBL:BC007434
EMBL:BC007857 EMBL:BC068055 EMBL:BC071940 EMBL:BC096756
EMBL:AB007150 IPI:IPI00221088 PIR:S55917 RefSeq:NP_001004.2
UniGene:Hs.467284 UniGene:Hs.546288 ProteinModelPortal:P46781
SMR:P46781 IntAct:P46781 MINT:MINT-5001013 STRING:P46781
PhosphoSite:P46781 DMDM:20178311 PaxDb:P46781 PeptideAtlas:P46781
PRIDE:P46781 DNASU:6203 Ensembl:ENST00000302907
Ensembl:ENST00000391752 Ensembl:ENST00000391753
Ensembl:ENST00000573353 Ensembl:ENST00000573511
Ensembl:ENST00000574910 Ensembl:ENST00000575726
Ensembl:ENST00000575746 Ensembl:ENST00000576887 GeneID:6203
KEGG:hsa:6203 UCSC:uc002qdx.3 GeneCards:GC19P054828 HGNC:HGNC:10442
HPA:HPA048746 MIM:603631 neXtProt:NX_P46781 PharmGKB:PA34857
InParanoid:P46781 PhylomeDB:P46781 GenomeRNAi:6203 NextBio:24091
ArrayExpress:P46781 Bgee:P46781 CleanEx:HS_RPS9
Genevestigator:P46781 GermOnline:ENSG00000170889 Uniprot:P46781
Length = 194
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 110/125 (88%), Positives = 116/125 (92%)
Query: 12 KTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHR- 70
KTYVTPRRP+EK+RLDQELK+IGEYGLRNKREVWRVK+ LAKIRKAARELLTLDEK+ R
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 71 ----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 126
NALLRRLVRIGVLDE KMKLDY+ GLKIEDFLERRLQTQVFKLGLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 127 RQRHI 131
RQRHI
Sbjct: 131 RQRHI 135
>UNIPROTKB|A9L913 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9555 "Papio
anubis" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 GO:GO:0006412 GO:GO:0003735
GO:GO:0030529 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
InterPro:IPR022801 PANTHER:PTHR11831 TIGRFAMs:TIGR01018 CTD:6203
HOVERGEN:HBG001135 EMBL:DP000506 RefSeq:NP_001162349.1
UniGene:Pan.54 ProteinModelPortal:A9L913 SMR:A9L913 PRIDE:A9L913
GeneID:100137341 Uniprot:A9L913
Length = 194
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 110/125 (88%), Positives = 116/125 (92%)
Query: 12 KTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHR- 70
KTYVTPRRP+EK+RLDQELK+IGEYGLRNKREVWRVK+ LAKIRKAARELLTLDEK+ R
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 71 ----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 126
NALLRRLVRIGVLDE KMKLDY+ GLKIEDFLERRLQTQVFKLGLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 127 RQRHI 131
RQRHI
Sbjct: 131 RQRHI 135
>MGI|MGI:1924096 [details] [associations]
symbol:Rps9 "ribosomal protein S9" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=ISO] [GO:0006417
"regulation of translation" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=ISO]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 MGI:MGI:1924096 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0030529 GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 CTD:6203 HOVERGEN:HBG001135
OrthoDB:EOG4MW876 ChiTaRS:RPS9 EMBL:AK050591 EMBL:AK081889
EMBL:AK150800 EMBL:AK150988 EMBL:AK151029 EMBL:AK151621
EMBL:BC031746 IPI:IPI00420726 RefSeq:NP_084043.1 UniGene:Mm.13944
ProteinModelPortal:Q6ZWN5 SMR:Q6ZWN5 STRING:Q6ZWN5
PhosphoSite:Q6ZWN5 PaxDb:Q6ZWN5 PRIDE:Q6ZWN5
Ensembl:ENSMUST00000006496 Ensembl:ENSMUST00000108625 GeneID:76846
KEGG:mmu:76846 UCSC:uc009ewa.1 InParanoid:Q6ZWN5 NextBio:345919
Bgee:Q6ZWN5 CleanEx:MM_RPS9 Genevestigator:Q6ZWN5
GermOnline:ENSMUSG00000006333 Uniprot:Q6ZWN5
Length = 194
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 110/125 (88%), Positives = 116/125 (92%)
Query: 12 KTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHR- 70
KTYVTPRRP+EK+RLDQELK+IGEYGLRNKREVWRVK+ LAKIRKAARELLTLDEK+ R
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 71 ----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 126
NALLRRLVRIGVLDE KMKLDY+ GLKIEDFLERRLQTQVFKLGLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 127 RQRHI 131
RQRHI
Sbjct: 131 RQRHI 135
>RGD|2320851 [details] [associations]
symbol:LOC100364509 "ribosomal protein S9-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 RGD:2320851 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 TIGRFAMs:TIGR01018 EMBL:AC126217 IPI:IPI00391036
ProteinModelPortal:D3ZF87 SMR:D3ZF87 PRIDE:D3ZF87
Ensembl:ENSRNOT00000035413 ArrayExpress:D3ZF87 Uniprot:D3ZF87
Length = 139
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 110/125 (88%), Positives = 116/125 (92%)
Query: 12 KTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHR- 70
KTYVTPRRP+EK+RLDQELK+IGEYGLRNKREVWRVK+ LAKIRKAARELLTLDEK+ R
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 71 ----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 126
NALLRRLVRIGVLDE KMKLDY+ GLKIEDFLERRLQTQVFKLGLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 127 RQRHI 131
RQRHI
Sbjct: 131 RQRHI 135
>RGD|619889 [details] [associations]
symbol:Rps9 "ribosomal protein S9" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006412 "translation" evidence=IEA;ISO]
[GO:0006417 "regulation of translation" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008284 "positive regulation
of cell proliferation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO;IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO;ISS] [GO:0045182 "translation regulator activity"
evidence=ISO] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 RGD:619889
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 GO:GO:0022627
Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 OMA:QTIVYRK
TIGRFAMs:TIGR01018 GeneTree:ENSGT00550000074829 CTD:6203
HOVERGEN:HBG001135 OrthoDB:EOG4MW876 EMBL:X66370 EMBL:BC060560
IPI:IPI00421626 PIR:JN0587 RefSeq:NP_112370.2 RefSeq:XP_003748763.1
UniGene:Rn.109735 UniGene:Rn.225908 ProteinModelPortal:P29314
SMR:P29314 IntAct:P29314 STRING:P29314 PRIDE:P29314
Ensembl:ENSRNOT00000015234 GeneID:100909466 GeneID:81772
KEGG:rno:100909466 KEGG:rno:81772 UCSC:RGD:619889 InParanoid:P29314
NextBio:615589 ArrayExpress:P29314 Genevestigator:P29314
GermOnline:ENSRNOG00000011355 Uniprot:P29314
Length = 194
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 110/125 (88%), Positives = 116/125 (92%)
Query: 12 KTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHR- 70
KTYVTPRRP+EK+RLDQELK+IGEYGLRNKREVWRVK+ LAKIRKAARELLTLDEK+ R
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 71 ----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 126
NALLRRLVRIGVLDE KMKLDY+ GLKIEDFLERRLQTQVFKLGLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 127 RQRHI 131
RQRHI
Sbjct: 131 RQRHI 135
>ZFIN|ZDB-GENE-010724-15 [details] [associations]
symbol:rps9 "ribosomal protein S9" species:7955
"Danio rerio" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 ZFIN:ZDB-GENE-010724-15 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
EMBL:BX511250 HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 CTD:6203 HOVERGEN:HBG001135
EMBL:CU693477 EMBL:BC059492 EMBL:BC062833 IPI:IPI00487430
RefSeq:NP_957146.1 UniGene:Dr.75119 STRING:Q6P5M3
Ensembl:ENSDART00000129698 GeneID:114420 KEGG:dre:114420
InParanoid:Q6P5M3 NextBio:20796909 Uniprot:Q6P5M3
Length = 194
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 109/128 (85%), Positives = 118/128 (92%)
Query: 9 VHSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKE 68
V SKTYVTPRRP+EK+RLDQEL++IGEYGLRNKREVWRVK+ LAKIRKAARELLTLDEK+
Sbjct: 8 VCSKTYVTPRRPFEKSRLDQELRLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 69 HR-----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHAR 123
+ NALLRRLVRIGVLDE KMKLDY+ GLK+EDFLERRLQTQVFKLGLAKSIHHAR
Sbjct: 68 PKRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 124 VLIRQRHI 131
VLIRQRHI
Sbjct: 128 VLIRQRHI 135
>UNIPROTKB|Q29197 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9823 "Sus
scrofa" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001912 InterPro:IPR005710 Pfam:PF00163
PROSITE:PS00632 PROSITE:PS50889 GO:GO:0006412 GO:GO:0003735
GO:GO:0030529 GO:GO:0019843 GO:GO:0015935 InterPro:IPR022801
PANTHER:PTHR11831 TIGRFAMs:TIGR01018 HOVERGEN:HBG001135 EMBL:F14517
PRIDE:Q29197 Uniprot:Q29197
Length = 130
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 105/122 (86%), Positives = 111/122 (90%)
Query: 12 KTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHR- 70
KTYVTPRRP+EK+RLDQELK+IGEYGLRNKREVWRVK+ LAKIRKAARELLTLDEK+ R
Sbjct: 9 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 68
Query: 71 ----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 126
NALLRRLVRIGVLDE KMKLDY+ GLKIEDFLERRLQTQVFKLGLA SIHH RVLI
Sbjct: 69 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAXSIHHXRVLI 128
Query: 127 RQ 128
RQ
Sbjct: 129 RQ 130
>RGD|1566136 [details] [associations]
symbol:RGD1566136 "similar to 40S ribosomal protein S9"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] InterPro:IPR001912
InterPro:IPR002942 InterPro:IPR005710 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 RGD:1566136 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
InterPro:IPR022801 PANTHER:PTHR11831 TIGRFAMs:TIGR01018 OMA:QDFMERR
GeneTree:ENSGT00550000074829 OrthoDB:EOG4MW876 IPI:IPI00368950
RefSeq:XP_001056883.1 RefSeq:XP_213106.1 PRIDE:D3ZV50
Ensembl:ENSRNOT00000060001 GeneID:300278 KEGG:rno:300278 CTD:300278
NextBio:646699 Uniprot:D3ZV50
Length = 194
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 106/125 (84%), Positives = 112/125 (89%)
Query: 12 KTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHR- 70
KTYVTPRRP+EK+RLDQELK+IGEYGLRNK EVWRVK+ LAKIRKAARELLTLDEK+ R
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 71 ----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 126
NALLRRLVRI VLDE KMKLDY+ GLKIEDFLERRLQTQVFKL LAKSIHHA VLI
Sbjct: 71 LFEGNALLRRLVRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLI 130
Query: 127 RQRHI 131
RQRHI
Sbjct: 131 RQRHI 135
>ASPGD|ASPL0000071451 [details] [associations]
symbol:AN4803 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0045903
"positive regulation of translational fidelity" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 GO:GO:0006412 GO:GO:0003735
EMBL:BN001303 GO:GO:0019843 EMBL:AACD01000081 GO:GO:0015935
Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 OMA:QTIVYRK
TIGRFAMs:TIGR01018 OrthoDB:EOG4Q886R RefSeq:XP_662407.1
ProteinModelPortal:Q5B3S7 STRING:Q5B3S7
EnsemblFungi:CADANIAT00005618 GeneID:2872602 KEGG:ani:AN4803.2
Uniprot:Q5B3S7
Length = 193
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 101/131 (77%), Positives = 116/131 (88%)
Query: 6 VPSVHSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLD 65
VP V+SKTY PRRP+E ARLD ELKI+GEYGLRNKREVWRV++ L+KIR+AARELLTLD
Sbjct: 4 VPRVYSKTYKVPRRPFESARLDSELKIVGEYGLRNKREVWRVQFTLSKIRRAARELLTLD 63
Query: 66 EKEHR-----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIH 120
EK+ + NAL+RRLVRIGVLDES+MKLDYV L++EDFLERRLQT V+KLGLAKSIH
Sbjct: 64 EKDPKRLFEGNALIRRLVRIGVLDESRMKLDYVLALRVEDFLERRLQTCVYKLGLAKSIH 123
Query: 121 HARVLIRQRHI 131
HARVLI+QRHI
Sbjct: 124 HARVLIKQRHI 134
>WB|WBGene00004478 [details] [associations]
symbol:rps-9 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0032502
"developmental process" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 GO:GO:0010171 GO:GO:0000003
GO:GO:0003735 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 EMBL:Z69302 PIR:T22034
RefSeq:NP_496384.1 ProteinModelPortal:Q20228 SMR:Q20228
DIP:DIP-25908N MINT:MINT-1122534 STRING:Q20228 PaxDb:Q20228
PRIDE:Q20228 EnsemblMetazoa:F40F8.10.1 EnsemblMetazoa:F40F8.10.2
GeneID:174699 KEGG:cel:CELE_F40F8.10 UCSC:F40F8.10.1 CTD:174699
WormBase:F40F8.10 InParanoid:Q20228 NextBio:885126 Uniprot:Q20228
Length = 189
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 99/132 (75%), Positives = 116/132 (87%)
Query: 5 RVPSVHSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTL 64
R+ +V SK +PRRP+EK RLDQELK+IG +GL+NKREVWRVKY LAK+RKAARELLTL
Sbjct: 3 RLKTVQSKVTKSPRRPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTL 62
Query: 65 DEKEHR-----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSI 119
++K+ + NALLRRLV+IGVLDE+KMKLDYV GLK+EDFLERRLQTQVFKLGLAKSI
Sbjct: 63 EDKDPKRLFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSI 122
Query: 120 HHARVLIRQRHI 131
HHAR+LI+Q HI
Sbjct: 123 HHARILIKQHHI 134
>UNIPROTKB|I3LEX0 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9823 "Sus
scrofa" [GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 EMBL:FP476135
Ensembl:ENSSSCT00000027911 Uniprot:I3LEX0
Length = 193
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 102/127 (80%), Positives = 109/127 (85%)
Query: 12 KTYVTPRRPYEK-ARLDQEL-KIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEH 69
KTYVTPRRP+E A E +++ EYGLRNKREVWRVK+ LAKIRKAARELLTLDEK+
Sbjct: 8 KTYVTPRRPFESLASTRAEADRLVREYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDP 67
Query: 70 R-----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARV 124
R NALLRRLVRIGVLDE KMKLDY+ GLKIEDFLERRLQTQVFKLGLAKSIHHARV
Sbjct: 68 RRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARV 127
Query: 125 LIRQRHI 131
LIRQRHI
Sbjct: 128 LIRQRHI 134
>POMBASE|SPBC29A3.12 [details] [associations]
symbol:rps902 "40S ribosomal protein S9 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 PomBase:SPBC29A3.12 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 OMA:QTIVYRK
TIGRFAMs:TIGR01018 EMBL:AB027929 OrthoDB:EOG4Q886R EMBL:AB029515
PIR:T40083 PIR:T43516 RefSeq:NP_595840.1 ProteinModelPortal:O59675
STRING:O59675 PRIDE:O59675 EnsemblFungi:SPBC29A3.12.1
GeneID:2540367 KEGG:spo:SPBC29A3.12 NextBio:20801495 Uniprot:O59675
Length = 192
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 96/130 (73%), Positives = 109/130 (83%)
Query: 7 PSVHSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDE 66
P SKTY PRRP+E ARLD ELK+ GEYGLRNK E+WRV L+KIR+AARELLTLDE
Sbjct: 5 PRKQSKTYKVPRRPFESARLDAELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDE 64
Query: 67 KEHR-----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHH 121
K+ + NA++RRLVR+G+LDES+MKLDYV L+IEDFLERRLQTQVFKLGLAKSIHH
Sbjct: 65 KDPKRLFEGNAIIRRLVRLGILDESRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHH 124
Query: 122 ARVLIRQRHI 131
ARVLI QRHI
Sbjct: 125 ARVLIFQRHI 134
>POMBASE|SPAC24H6.07 [details] [associations]
symbol:rps901 "40S ribosomal protein S9" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 PomBase:SPAC24H6.07 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 TIGRFAMs:TIGR01018
EMBL:AB027929 EMBL:AB011008 PIR:S62409 PIR:T43321
RefSeq:NP_592945.1 ProteinModelPortal:Q09757 STRING:Q09757
PRIDE:Q09757 EnsemblFungi:SPAC24H6.07.1 GeneID:2542629
KEGG:spo:SPAC24H6.07 OMA:QDFMERR OrthoDB:EOG4Q886R NextBio:20803678
Uniprot:Q09757
Length = 191
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 95/130 (73%), Positives = 109/130 (83%)
Query: 7 PSVHSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDE 66
P SKTY PRRP+E ARLD ELK+ GEYGLRNK E+WRV L+KIR+AARELLTLDE
Sbjct: 5 PRKQSKTYKVPRRPFESARLDAELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDE 64
Query: 67 KEHR-----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHH 121
K+ + NA++RRLVR+G+LDE++MKLDYV L+IEDFLERRLQTQVFKLGLAKSIHH
Sbjct: 65 KDPKRLFEGNAIIRRLVRLGILDETRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHH 124
Query: 122 ARVLIRQRHI 131
ARVLI QRHI
Sbjct: 125 ARVLIFQRHI 134
>SGD|S000000393 [details] [associations]
symbol:RPS9B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0045903 "positive regulation of translational fidelity"
evidence=IMP] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 SGD:S000000393
GO:GO:0005730 GO:GO:0006412 EMBL:BK006936 GO:GO:0003735
RefSeq:NP_009753.3 GeneID:852493 KEGG:sce:YBR194W GO:GO:0019843
GO:GO:0030686 GO:GO:0032040 GO:GO:0045903 GO:GO:0000462
GO:GO:0022627 EMBL:U02073 Gene3D:3.10.290.10 eggNOG:COG0522
InterPro:IPR022801 PANTHER:PTHR11831 RefSeq:NP_009748.3
GeneID:852487 KEGG:sce:YBR189W KO:K02997 HOGENOM:HOG000194525
OMA:QTIVYRK TIGRFAMs:TIGR01018 OrthoDB:EOG4Q886R
GeneTree:ENSGT00550000074829 EMBL:M88650 EMBL:Z36058 PIR:S31287
ProteinModelPortal:P05755 SMR:P05755 IntAct:P05755
MINT:MINT-2786155 STRING:P05755 PaxDb:P05755 PeptideAtlas:P05755
EnsemblFungi:YBR189W NextBio:971471 Genevestigator:P05755
GermOnline:YBR189W Uniprot:P05755
Length = 195
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 90/132 (68%), Positives = 110/132 (83%)
Query: 5 RVPSVHSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTL 64
R P +SKTY TP+RPYE +RLD ELK+ GE+GL+NKRE++R+ + L+KIR+AAR+LLT
Sbjct: 3 RAPRTYSKTYSTPKRPYESSRLDAELKLAGEFGLKNKREIYRISFQLSKIRRAARDLLTR 62
Query: 65 DEKEHR-----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSI 119
DEK+ + NAL+RRLVR+GVL E K KLDYV LK+EDFLERRLQTQV+KLGLAKS+
Sbjct: 63 DEKDPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSV 122
Query: 120 HHARVLIRQRHI 131
HHARVLI QRHI
Sbjct: 123 HHARVLITQRHI 134
>SGD|S000006002 [details] [associations]
symbol:RPS9A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IGI] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA;IMP;IDA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IDA] [GO:0002181 "cytoplasmic
translation" evidence=IC] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 SGD:S000006002
GO:GO:0005730 EMBL:BK006949 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 EMBL:U41849 GO:GO:0030686 GO:GO:0032040 GO:GO:0000462
PDB:1S1H PDBsum:1S1H GO:GO:0022627 PDB:3IZB PDB:3O2Z PDB:3O30
PDB:3U5C PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3U5C
PDBsum:3U5G Gene3D:3.10.290.10 InterPro:IPR022801 PANTHER:PTHR11831
KO:K02997 PDB:1K5X PDBsum:1K5X HOGENOM:HOG000194525
TIGRFAMs:TIGR01018 OMA:RTKRELW OrthoDB:EOG4Q886R EMBL:D00724
PIR:S16822 RefSeq:NP_015244.1 ProteinModelPortal:O13516 SMR:O13516
IntAct:O13516 MINT:MINT-2786178 STRING:O13516 PeptideAtlas:O13516
PRIDE:O13516 EnsemblFungi:YPL081W GeneID:856024 KEGG:sce:YPL081W
GeneTree:ENSGT00550000074829 EvolutionaryTrace:O13516
NextBio:980938 Genevestigator:O13516 GermOnline:YPL081W
Uniprot:O13516
Length = 197
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 89/132 (67%), Positives = 110/132 (83%)
Query: 5 RVPSVHSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTL 64
R P +SKTY TP+RPYE +RLD ELK+ GE+GL+NK+E++R+ + L+KIR+AAR+LLT
Sbjct: 3 RAPRTYSKTYSTPKRPYESSRLDAELKLAGEFGLKNKKEIYRISFQLSKIRRAARDLLTR 62
Query: 65 DEKEHR-----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSI 119
DEK+ + NAL+RRLVR+GVL E K KLDYV LK+EDFLERRLQTQV+KLGLAKS+
Sbjct: 63 DEKDPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSV 122
Query: 120 HHARVLIRQRHI 131
HHARVLI QRHI
Sbjct: 123 HHARVLITQRHI 134
>UNIPROTKB|F1LY44 [details] [associations]
symbol:F1LY44 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 Pfam:PF00163 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 TIGRFAMs:TIGR01018 IPI:IPI00370527
Ensembl:ENSRNOT00000048196 Uniprot:F1LY44
Length = 189
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 94/125 (75%), Positives = 106/125 (84%)
Query: 12 KTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHR- 70
KT VTP+RP+EK+RLDQ LK+IGEYGLRNKREVW+VK+ LAKIRK A ELLTLDEK+ +
Sbjct: 8 KTDVTPQRPFEKSRLDQGLKLIGEYGLRNKREVWKVKFTLAKIRKPALELLTLDEKDPQP 67
Query: 71 ----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 126
NALLR+LV G L+E KMKLDY+ GLKIEDFLER LQTQVFKL LAKSIHHARVLI
Sbjct: 68 LFEGNALLRQLVHFGELEEGKMKLDYILGLKIEDFLERWLQTQVFKLDLAKSIHHARVLI 127
Query: 127 RQRHI 131
+RHI
Sbjct: 128 CRRHI 132
>DICTYBASE|DDB_G0289877 [details] [associations]
symbol:rps9 "40S ribosomal protein S9" species:44689
"Dictyostelium discoideum" [GO:0031982 "vesicle" evidence=IDA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001912
InterPro:IPR002942 InterPro:IPR005710 InterPro:IPR018079
Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632 PROSITE:PS50889
SMART:SM00363 dictyBase:DDB_G0289877 GO:GO:0006412
GenomeReviews:CM000154_GR GO:GO:0003735 EMBL:AAFI02000149
GO:GO:0031982 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
TIGRFAMs:TIGR01018 OMA:QDFMERR EMBL:X06636 EMBL:X15384 PIR:S01093
RefSeq:XP_635999.1 ProteinModelPortal:P14132 STRING:P14132
PRIDE:P14132 EnsemblProtists:DDB0191528 GeneID:8627414
KEGG:ddi:DDB_G0289877 ProtClustDB:PTZ00155 Uniprot:P14132
Length = 185
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 89/129 (68%), Positives = 109/129 (84%)
Query: 8 SVHSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEK 67
S +SKT TPRRP+EK R+D ELK++GE+GL+NK EVWRV+YALAKIRKAARELL LDEK
Sbjct: 3 SNYSKTSHTPRRPFEKERIDAELKVVGEFGLKNKNEVWRVQYALAKIRKAARELLVLDEK 62
Query: 68 EHR-----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHA 122
+ + +ALLRRL ++GV++ESK KLDY+ LK++DF+ERRLQT VFK GLAKSIHHA
Sbjct: 63 DPKRIFEGSALLRRLHKLGVMEESKNKLDYILNLKVQDFMERRLQTLVFKNGLAKSIHHA 122
Query: 123 RVLIRQRHI 131
RVLI+ RHI
Sbjct: 123 RVLIKGRHI 131
>TAIR|locus:2178082 [details] [associations]
symbol:AT5G39850 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005829
GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016020
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 GO:GO:0015935
EMBL:AB010077 Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525
ProtClustDB:PLN00189 TIGRFAMs:TIGR01018 EMBL:BT024915 EMBL:AY088109
IPI:IPI00526550 RefSeq:NP_198801.1 UniGene:At.43632
ProteinModelPortal:Q9FLF0 SMR:Q9FLF0 STRING:Q9FLF0 PaxDb:Q9FLF0
PRIDE:Q9FLF0 EnsemblPlants:AT5G39850.1 GeneID:833981
KEGG:ath:AT5G39850 TAIR:At5g39850 InParanoid:Q9FLF0 OMA:RTKRELW
PhylomeDB:Q9FLF0 Genevestigator:Q9FLF0 GermOnline:AT5G39850
Uniprot:Q9FLF0
Length = 197
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 92/136 (67%), Positives = 107/136 (78%)
Query: 1 MVNNRVPSVHSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60
MVN R + KT+ PRRPYEK RLD ELK++GEYGLR KRE+WRV+Y L++IR AARE
Sbjct: 1 MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60
Query: 61 LLTLDEKEHRN-----ALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGL 115
LLTLDEK R ALLRR+ R G+LDE++ KLDYV L +E+FLERRLQT VFK G+
Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120
Query: 116 AKSIHHARVLIRQRHI 131
AKSIHHARVLIRQRHI
Sbjct: 121 AKSIHHARVLIRQRHI 136
>TAIR|locus:2150976 [details] [associations]
symbol:AT5G15200 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0009506
GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0009507 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:AL353993 GO:GO:0022627 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
EMBL:BT010847 EMBL:BT011315 EMBL:AK228437 IPI:IPI00534338
PIR:T49955 RefSeq:NP_197024.1 UniGene:At.1767
ProteinModelPortal:Q9LXG1 SMR:Q9LXG1 STRING:Q9LXG1 PaxDb:Q9LXG1
PRIDE:Q9LXG1 EnsemblPlants:AT5G15200.1 GeneID:831372
KEGG:ath:AT5G15200 TAIR:At5g15200 HOGENOM:HOG000194525
InParanoid:Q9LXG1 OMA:QTIVYRK PhylomeDB:Q9LXG1 ProtClustDB:PLN00189
Genevestigator:Q9LXG1 GermOnline:AT5G15200 TIGRFAMs:TIGR01018
Uniprot:Q9LXG1
Length = 198
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 88/127 (69%), Positives = 105/127 (82%)
Query: 10 HSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEH 69
+ KT+ PRRPYEK RLD ELK++GEYGLRNKRE+WRV+Y+L++IR AAR+LLTLDEK
Sbjct: 10 YGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARDLLTLDEKSP 69
Query: 70 RN-----ALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARV 124
R ALLRR+ R G+LDES+ KLDYV L +E+FLERRLQT VFK G+AKSIHH+RV
Sbjct: 70 RRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHSRV 129
Query: 125 LIRQRHI 131
LIRQRHI
Sbjct: 130 LIRQRHI 136
>RGD|1594500 [details] [associations]
symbol:LOC365692 "similar to ribosomal protein S9" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR005710
Pfam:PF00163 RGD:1594500 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0015935 InterPro:IPR022801 PANTHER:PTHR11831
TIGRFAMs:TIGR01018 GeneTree:ENSGT00550000074829 OrthoDB:EOG4MW876
IPI:IPI00563280 Ensembl:ENSRNOT00000031124 OMA:RRCHIRI
Uniprot:D3ZTT5
Length = 136
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 76/130 (58%), Positives = 94/130 (72%)
Query: 9 VHSKTYVTPRRPYEKARLDQELKIIG-EYGLRNKREV-WRVKYALAKIRKAARELLTLDE 66
V KT VT +RP EK L+QELK+IG ++ + + + V WR +KI KAARELLTL+E
Sbjct: 8 VRCKTCVTSQRPLEKLCLNQELKLIGGDWRVHSGKNVRWRGSNLPSKIFKAARELLTLEE 67
Query: 67 KEHR-----NALLRRLVRIGVLDESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHH 121
K+ + NALLR LVR+G+LDE KMKLDY+ GLK E+FLER VF+LGLAKSIHH
Sbjct: 68 KDPQCLFEGNALLRGLVRVGMLDEGKMKLDYILGLKSENFLER-----VFQLGLAKSIHH 122
Query: 122 ARVLIRQRHI 131
A VLIR+ HI
Sbjct: 123 AHVLIRRCHI 132
>UNIPROTKB|A8MXK4 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR001912 InterPro:IPR005710 Pfam:PF00163
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 GO:GO:0015935
InterPro:IPR022801 PANTHER:PTHR11831 EMBL:AC010492 EMBL:AC012314
TIGRFAMs:TIGR01018 ChiTaRS:RPS9 HGNC:HGNC:10442 IPI:IPI00853062
ProteinModelPortal:A8MXK4 SMR:A8MXK4 STRING:A8MXK4 PRIDE:A8MXK4
Ensembl:ENST00000391751 UCSC:uc002qdy.3 HOGENOM:HOG000015367
ArrayExpress:A8MXK4 Bgee:A8MXK4 Uniprot:A8MXK4
Length = 79
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 52/59 (88%), Positives = 57/59 (96%)
Query: 12 KTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHR 70
KTYVTPRRP+EK+RLDQELK+IGEYGLRNKREVWRVK+ LAKIRKAARELLTLDEK+ R
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69
>UNIPROTKB|F2Z3C0 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR001912 InterPro:IPR005710 Pfam:PF00163
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 GO:GO:0015935
InterPro:IPR022801 PANTHER:PTHR11831 EMBL:AC010492 EMBL:AC012314
TIGRFAMs:TIGR01018 ChiTaRS:RPS9 HGNC:HGNC:10442 IPI:IPI00879512
ProteinModelPortal:F2Z3C0 SMR:F2Z3C0 PRIDE:F2Z3C0
Ensembl:ENST00000448962 ArrayExpress:F2Z3C0 Bgee:F2Z3C0
Uniprot:F2Z3C0
Length = 77
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 52/59 (88%), Positives = 57/59 (96%)
Query: 12 KTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHR 70
KTYVTPRRP+EK+RLDQELK+IGEYGLRNKREVWRVK+ LAKIRKAARELLTLDEK+ R
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69
>RGD|1306825 [details] [associations]
symbol:Imp3 "IMP3, U3 small nucleolar ribonucleoprotein, homolog
(yeast)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 RGD:1306825 GO:GO:0005730
GO:GO:0030529 GO:GO:0019843 EMBL:CH473975 GO:GO:0006364
Gene3D:3.10.290.10 CTD:55272 eggNOG:COG0522 HOGENOM:HOG000213883
HOVERGEN:HBG052121 KO:K14560 OrthoDB:EOG4GB779 InterPro:IPR022801
PANTHER:PTHR11831 OMA:FIEQGHV GeneTree:ENSGT00550000075090
EMBL:BC166985 IPI:IPI00369733 RefSeq:NP_001101622.1 UniGene:Rn.3787
SMR:B2RZ12 STRING:B2RZ12 Ensembl:ENSRNOT00000023456 GeneID:315697
KEGG:rno:315697 UCSC:RGD:1306825 NextBio:669686
Genevestigator:B2RZ12 Uniprot:B2RZ12
Length = 184
Score = 109 (43.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 30/108 (27%), Positives = 53/108 (49%)
Query: 29 ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHRN-----ALLRRLVRIGVL 83
EL+++ YGL+ + E R +R+ AR L L E++ ALL +L +G++
Sbjct: 30 ELRVLRRYGLQRREEYTRYNQLSRAVRELARRLRDLPERDPFRVRASAALLDKLYALGLV 89
Query: 84 DESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 131
++ L+ + F RRL T + KL +A+ + A + Q H+
Sbjct: 90 P-TRGSLELCDSVSASSFCRRRLPTLLLKLRMAQHLQAAVAFVEQGHV 136
>ZFIN|ZDB-GENE-040426-1062 [details] [associations]
symbol:imp3 "IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast)" species:7955 "Danio rerio"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002942
Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
ZFIN:ZDB-GENE-040426-1062 GO:GO:0003723 GO:GO:0030529
Gene3D:3.10.290.10 eggNOG:COG0522 HOGENOM:HOG000213883
HOVERGEN:HBG052121 OrthoDB:EOG4GB779 InterPro:IPR022801
PANTHER:PTHR11831 OMA:FIEQGHV GeneTree:ENSGT00550000075090
EMBL:CR956623 IPI:IPI00512987 UniGene:Dr.113818 SMR:A5WV64
Ensembl:ENSDART00000100709 Uniprot:A5WV64
Length = 183
Score = 101 (40.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 29/108 (26%), Positives = 54/108 (50%)
Query: 29 ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKE----HRNAL-LRRLVRIGVL 83
E+K++ +Y + + + + IR+ A+++ LD K+ AL L +L +G++
Sbjct: 29 EVKVLRKYHIEKREDYTKYNKLSRNIRELAQKIRDLDAKDGFRSQSTALFLEKLYSVGLI 88
Query: 84 DESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 131
+K L + F RRL T + KL +A+++ +A I Q HI
Sbjct: 89 P-TKQNLSLANEVSASAFCRRRLPTIMLKLRMAQNLRNAITFIEQGHI 135
>MGI|MGI:1916119 [details] [associations]
symbol:Imp3 "IMP3, U3 small nucleolar ribonucleoprotein,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO;ISA] [GO:0006364 "rRNA processing" evidence=IGI]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0030519 "snoRNP
binding" evidence=ISA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 MGI:MGI:1916119
GO:GO:0005730 GO:GO:0030529 GO:GO:0019843 GO:GO:0030519
GO:GO:0006364 Gene3D:3.10.290.10 CTD:55272 eggNOG:COG0522
HOGENOM:HOG000213883 HOVERGEN:HBG052121 KO:K14560 OrthoDB:EOG4GB779
InterPro:IPR022801 PANTHER:PTHR11831 OMA:FIEQGHV EMBL:BC009145
IPI:IPI00122383 RefSeq:NP_598737.1 UniGene:Mm.12864
ProteinModelPortal:Q921Y2 SMR:Q921Y2 STRING:Q921Y2
PhosphoSite:Q921Y2 PaxDb:Q921Y2 PRIDE:Q921Y2
Ensembl:ENSMUST00000034827 GeneID:102462 KEGG:mmu:102462
UCSC:uc009ptq.1 GeneTree:ENSGT00550000075090 InParanoid:Q921Y2
NextBio:355498 Bgee:Q921Y2 Genevestigator:Q921Y2
GermOnline:ENSMUSG00000032288 Uniprot:Q921Y2
Length = 184
Score = 100 (40.3 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 29/108 (26%), Positives = 52/108 (48%)
Query: 29 ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHRN-----ALLRRLVRIGVL 83
EL+++ Y L+ + E R +R+ AR L L E++ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREEYTRYNQLSRAVRELARRLRDLPERDPFRVRASAALLDKLYAMGLV 89
Query: 84 DESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 131
++ L+ + F RRL T + KL +A+ + A + Q H+
Sbjct: 90 P-TRGSLELCDSVSASSFCRRRLPTLLLKLRMAQHLQAAVAFVEQGHV 136
>UNIPROTKB|F1MZR5 [details] [associations]
symbol:IMP3 "U3 small nucleolar ribonucleoprotein protein
IMP3" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 GO:GO:0005730 GO:GO:0019843
GO:GO:0006364 Gene3D:3.10.290.10 IPI:IPI00712796 UniGene:Bt.49031
InterPro:IPR022801 PANTHER:PTHR11831 OMA:FIEQGHV
GeneTree:ENSGT00550000075090 EMBL:DAAA02052486
Ensembl:ENSBTAT00000016179 Uniprot:F1MZR5
Length = 184
Score = 96 (38.9 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 29/108 (26%), Positives = 54/108 (50%)
Query: 29 ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEH---RN--ALLRRLVRIGVL 83
EL+++ Y L+ + + R +R+ AR L L E++ R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDPFRVRSSAALLDKLYALGLV 89
Query: 84 DESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 131
++ L+ + F RRL T + KL +A+ + A + Q H+
Sbjct: 90 P-TRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHV 136
>UNIPROTKB|Q9NV31 [details] [associations]
symbol:IMP3 "U3 small nucleolar ribonucleoprotein protein
IMP3" species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR002942 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005730
EMBL:CH471136 GO:GO:0030529 GO:GO:0019843 GO:GO:0006364
Gene3D:3.10.290.10 CleanEx:HS_IMP3 CTD:55272 eggNOG:COG0522
HOGENOM:HOG000213883 HOVERGEN:HBG052121 KO:K14560 OrthoDB:EOG4GB779
InterPro:IPR022801 PANTHER:PTHR11831 EMBL:AY050497 EMBL:AL136913
EMBL:AK001830 EMBL:AK057531 EMBL:AK223121 EMBL:BC006487
EMBL:BC011745 IPI:IPI00019488 RefSeq:NP_060755.1 UniGene:Hs.513043
PDB:2CQJ PDBsum:2CQJ ProteinModelPortal:Q9NV31 SMR:Q9NV31
IntAct:Q9NV31 MINT:MINT-1449196 STRING:Q9NV31 PhosphoSite:Q9NV31
DMDM:52783099 PaxDb:Q9NV31 PeptideAtlas:Q9NV31 PRIDE:Q9NV31
DNASU:55272 Ensembl:ENST00000314852 Ensembl:ENST00000403490
GeneID:55272 KEGG:hsa:55272 UCSC:uc002bat.2 GeneCards:GC15M075931
H-InvDB:HIX0172858 HGNC:HGNC:14497 MIM:612980 neXtProt:NX_Q9NV31
PharmGKB:PA25517 InParanoid:Q9NV31 OMA:FIEQGHV PhylomeDB:Q9NV31
ChiTaRS:IMP3 EvolutionaryTrace:Q9NV31 GenomeRNAi:55272
NextBio:59389 ArrayExpress:Q9NV31 Bgee:Q9NV31 Genevestigator:Q9NV31
GermOnline:ENSG00000177971 Uniprot:Q9NV31
Length = 184
Score = 96 (38.9 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 28/108 (25%), Positives = 52/108 (48%)
Query: 29 ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHRN-----ALLRRLVRIGVL 83
EL+++ Y L+ + + R +R+ AR L L E++ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 84 DESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 131
++ L+ + F RRL T + KL +A+ + A + Q H+
Sbjct: 90 P-TRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHV 136
>UNIPROTKB|Q3T0M3 [details] [associations]
symbol:IMP3 "U3 small nucleolar ribonucleoprotein protein
IMP3" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
Pfam:PF00163 Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
GO:GO:0005730 GO:GO:0030529 GO:GO:0019843 GO:GO:0006364
Gene3D:3.10.290.10 EMBL:BC102331 IPI:IPI00712796
RefSeq:NP_001073056.1 UniGene:Bt.49031 ProteinModelPortal:Q3T0M3
SMR:Q3T0M3 STRING:Q3T0M3 GeneID:511560 KEGG:bta:511560 CTD:55272
eggNOG:COG0522 HOGENOM:HOG000213883 HOVERGEN:HBG052121
InParanoid:Q3T0M3 KO:K14560 OrthoDB:EOG4GB779 NextBio:20869987
InterPro:IPR022801 PANTHER:PTHR11831 Uniprot:Q3T0M3
Length = 184
Score = 95 (38.5 bits), Expect = 0.00021, P = 0.00021
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 29 ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEH---RN--ALLRRLVRIGVL 83
EL+++ Y L+ + + R +R+ AR L L E++ R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDPFRVRSSAALLDKLYALGLV 89
Query: 84 DE--SKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 131
S+ D+V F RRL T + KL +A+ + A + Q H+
Sbjct: 90 PTRGSQELCDFVTA---SSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHV 136
>UNIPROTKB|F1SJ73 [details] [associations]
symbol:IMP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
Pfam:PF00163 Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
GO:GO:0005730 GO:GO:0019843 GO:GO:0006364 Gene3D:3.10.290.10
CTD:55272 KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831
OMA:FIEQGHV GeneTree:ENSGT00550000075090 EMBL:CU582918
RefSeq:NP_001230221.1 UniGene:Ssc.2208 Ensembl:ENSSSCT00000002101
GeneID:100151831 KEGG:ssc:100151831 Uniprot:F1SJ73
Length = 184
Score = 94 (38.1 bits), Expect = 0.00041, P = 0.00041
Identities = 28/108 (25%), Positives = 52/108 (48%)
Query: 29 ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEHRN-----ALLRRLVRIGVL 83
EL+++ Y L+ + + R +R+ AR L L E++ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDPFRVRASAALLDKLYALGLV 89
Query: 84 DESKMKLDYVWGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 131
++ L+ + F RRL T + KL +A+ + A + Q H+
Sbjct: 90 P-TRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVTFVEQGHV 136
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.139 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 131 131 0.00091 102 3 11 22 0.49 30
29 0.42 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 540 (57 KB)
Total size of DFA: 119 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 15.28u 0.07s 15.35t Elapsed: 00:00:10
Total cpu time: 15.28u 0.07s 15.35t Elapsed: 00:00:13
Start: Thu Aug 15 14:38:24 2013 End: Thu Aug 15 14:38:37 2013