BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7993
(300 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DG43|UBTD2_DANRE Ubiquitin domain-containing protein 2 OS=Danio rerio GN=ubtd2 PE=2
SV=1
Length = 240
Score = 213 bits (543), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/281 (42%), Positives = 167/281 (59%), Gaps = 58/281 (20%)
Query: 1 MGSCLSIRRRNHPDHRNSF-DNANAPNAGLRKNHPLCHEIIRWKSDVPLTEGQLRSKRDE 59
MG C+ +H D S +N++ L +N PL E +WKSD P+T+GQLRSKRDE
Sbjct: 1 MGGCVG----SHHDSSGSLNENSDGTGVALGRNQPLKREKPKWKSDYPMTDGQLRSKRDE 56
Query: 60 FWDTAPAFEGRKEIWDALHAAASAAEGNDFQLAQAILDGANISVPNGFLTESYDELGNKY 119
FWDTAPAFEGRKEIWDAL AAA A E ND +LAQAI+DGA+I++P+G LTE YDELGN+Y
Sbjct: 57 FWDTAPAFEGRKEIWDALKAAAQAFESNDHELAQAIIDGASITLPHGALTECYDELGNRY 116
Query: 120 MVPVYCLSYLKFLLLHMSQPLRHVLVCANCYFPHPGFLTESYDELGNKYMVPVYCLSYPI 179
+PVYCL S P+
Sbjct: 117 QLPVYCL-------------------------------------------------SPPV 127
Query: 180 NITKETSGRDSPIEVFDLEEGVGGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSL 239
N+ +E S ++ IEV + GQE L+LRLS T +D+R+ V T ++V +K+RLQ+
Sbjct: 128 NMIEEKSESET-IEVPEA-PASEGQECQLRLRLS-TGRDLRLAVRTSDSVQQMKRRLQTQ 184
Query: 240 EGIETSKQRWYYGGKLLSDKMKISDIQNLASGFVIQVIINN 280
EG+ + QRW++ G+ L+DKMK+ +++ ++ +V+QVI++
Sbjct: 185 EGVAATSQRWFFSGRPLTDKMKLEELK-ISRDYVVQVIVSQ 224
>sp|Q6PGH0|UBTD2_MOUSE Ubiquitin domain-containing protein 2 OS=Mus musculus GN=Ubtd2 PE=2
SV=1
Length = 234
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/282 (41%), Positives = 162/282 (57%), Gaps = 60/282 (21%)
Query: 1 MGSCLSIRRRNHPDHRNSFDNANAPNAGLRKNHPLCHEIIRWKSDVPLTEGQLRSKRDEF 60
MG C+ + H + +N++ L +N PL E +WKSD P+T+GQLRSKRDEF
Sbjct: 1 MGGCVGAQ---HDSSGSLNENSDGTGVALGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEF 57
Query: 61 WDTAPAFEGRKEIWDALHAAASAAEGNDFQLAQAILDGANISVPNGFLTESYDELGNKYM 120
WDTAPAFEGRKEIWDAL AAA A E ND +LAQAI+DGANI++P+G LTE YDELGN+Y
Sbjct: 58 WDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQ 117
Query: 121 VPVYCLSYLKFLLLHMSQPLRHVLVCANCYFPHPGFLTESYDELGNKYMVPVYCLSYPIN 180
+PVYCL + PIN
Sbjct: 118 LPVYCL-------------------------------------------------APPIN 128
Query: 181 ITKETSGRDSPIEVFDLEEGV--GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQS 238
+ +E S IE D+ E G E L+LRLS T +D+R+ V + +TV +K+RL +
Sbjct: 129 MIEEKSD----IETLDIPEPPPNSGHESQLRLRLS-TGKDLRLVVRSTDTVFHMKRRLHA 183
Query: 239 LEGIETSKQRWYYGGKLLSDKMKISDIQNLASGFVIQVIINN 280
EG+E QRW++ G+ L+DKMK+ +++ + +V+QVI++
Sbjct: 184 TEGVEPGSQRWFFSGRPLTDKMKLEELK-IPKDYVVQVIVSQ 224
>sp|Q640W6|UBTD1_XENLA Ubiquitin domain-containing protein 1 OS=Xenopus laevis GN=ubtd1
PE=2 SV=1
Length = 234
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/282 (42%), Positives = 164/282 (58%), Gaps = 62/282 (21%)
Query: 1 MGSCLSIRRRNHPDHRNSF-DNANAPNAGLRKNHPLCHEIIRWKSDVPLTEGQLRSKRDE 59
MG C+ H D S +N++ L +N PL + +WKSD P+T+GQLRSKRDE
Sbjct: 1 MGGCVG----THHDSSGSLNENSDGTGVALGRNQPLKKDKPKWKSDYPMTDGQLRSKRDE 56
Query: 60 FWDTAPAFEGRKEIWDALHAAASAAEGNDFQLAQAILDGANISVPNGFLTESYDELGNKY 119
FWDTAPAFEGRKEIWDAL AAA A E ND +LAQAI+DGA+I++P+G LTE YDELGN+Y
Sbjct: 57 FWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGASITLPHGALTECYDELGNRY 116
Query: 120 MVPVYCLSYLKFLLLHMSQPLRHVLVCANCYFPHPGFLTESYDELGNKYMVPVYCLSYPI 179
+PVYCL + PI
Sbjct: 117 QLPVYCL-------------------------------------------------APPI 127
Query: 180 NITKETSGRDSPIEVFDLEEGV--GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQ 237
N+ +E S DS E D+ E G E L+LRLS T +D+R+ V + +TV +K+RL
Sbjct: 128 NMIEEKS--DS--ETLDIPEPPPNSGHECQLRLRLS-TGKDLRLMVRSADTVYHMKRRLH 182
Query: 238 SLEGIETSKQRWYYGGKLLSDKMKISDIQNLASGFVIQVIIN 279
+ EG+E + QRW++ G+ L+DKM++ +++ + FV+QVI++
Sbjct: 183 AAEGVEPASQRWFFSGRPLTDKMRLEELK-IPKDFVVQVIVS 223
>sp|Q8WUN7|UBTD2_HUMAN Ubiquitin domain-containing protein 2 OS=Homo sapiens GN=UBTD2 PE=1
SV=2
Length = 234
Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 160/281 (56%), Gaps = 60/281 (21%)
Query: 1 MGSCLSIRRRNHPDHRNSFDNANAPNAGLRKNHPLCHEIIRWKSDVPLTEGQLRSKRDEF 60
MG C+ + H + +N+ L +N PL E +WKSD P+T+GQLRSKRDEF
Sbjct: 1 MGGCVGAQ---HDSSGSLNENSEGTGVALGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEF 57
Query: 61 WDTAPAFEGRKEIWDALHAAASAAEGNDFQLAQAILDGANISVPNGFLTESYDELGNKYM 120
WDTAPAFEGRKEIWDAL AAA A E ND +LAQAI+DGANI++P+G LTE YDELGN+Y
Sbjct: 58 WDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQ 117
Query: 121 VPVYCLSYLKFLLLHMSQPLRHVLVCANCYFPHPGFLTESYDELGNKYMVPVYCLSYPIN 180
+PVYCL + PIN
Sbjct: 118 LPVYCL-------------------------------------------------APPIN 128
Query: 181 ITKETSGRDSPIEVFDLEEGV--GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQS 238
+ +E S IE D+ E G E L+LRLS T +D+++ V + +TV +K+RL +
Sbjct: 129 MIEEKSD----IETLDIPEPPPNSGYECQLRLRLS-TGKDLKLVVRSTDTVFHMKRRLHA 183
Query: 239 LEGIETSKQRWYYGGKLLSDKMKISDIQNLASGFVIQVIIN 279
EG+E QRW++ G+ L+DKMK +++ + +V+QVI++
Sbjct: 184 AEGVEPGSQRWFFSGRPLTDKMKFEELK-IPKDYVVQVIVS 223
>sp|Q5EAE3|UBTD2_BOVIN Ubiquitin domain-containing protein 2 OS=Bos taurus GN=UBTD2 PE=2
SV=1
Length = 234
Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 162/281 (57%), Gaps = 60/281 (21%)
Query: 1 MGSCLSIRRRNHPDHRNSFDNANAPNAGLRKNHPLCHEIIRWKSDVPLTEGQLRSKRDEF 60
MG C+ + H + +N+ L +N PL E +WKSD P+T+GQLRSKRDEF
Sbjct: 1 MGGCVGAQ---HDSSGSLNENSEGTGVALGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEF 57
Query: 61 WDTAPAFEGRKEIWDALHAAASAAEGNDFQLAQAILDGANISVPNGFLTESYDELGNKYM 120
WDTAPAFEGRKEIWDAL AAA A E ND +LAQAI+DGANI++P+G LTE YDELGN+Y
Sbjct: 58 WDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQ 117
Query: 121 VPVYCLSYLKFLLLHMSQPLRHVLVCANCYFPHPGFLTESYDELGNKYMVPVYCLSYPIN 180
+PVYCL + PIN
Sbjct: 118 LPVYCL-------------------------------------------------APPIN 128
Query: 181 ITKETSGRDSPIEVFDLEEGV--GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQS 238
+ +E S IE D+ E G E L+LRLS T +D+++ V + +TV +K+RL +
Sbjct: 129 MIEEKSD----IETLDIPEPPPNSGYESQLRLRLS-TGKDLKLVVRSTDTVYHMKRRLHA 183
Query: 239 LEGIETSKQRWYYGGKLLSDKMKISDIQNLASGFVIQVIIN 279
EG+E + QRW++ G+ L+DKM++ +++ + +V+QVI++
Sbjct: 184 AEGVEPASQRWFFSGRPLTDKMRLEELK-IPKDYVVQVIMS 223
>sp|Q4V8W7|UBTD1_DANRE Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2
SV=1
Length = 227
Score = 201 bits (511), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 156/284 (54%), Gaps = 62/284 (21%)
Query: 1 MGSCLSIRRRNHPDHRNSFDNANAPNAGLRKNHPLCHEIIRWKSDVPLTEGQLRSKRDEF 60
MG C+ R + R G +N PL + +WKSD P+TEGQLRSKRDEF
Sbjct: 1 MGGCVG---RERAETRGRGSRTQRKRGG--RNEPLKKDKPKWKSDYPMTEGQLRSKRDEF 55
Query: 61 WDTAPAFEGRKEIWDALHAAASAAEGNDFQLAQAILDGANISVPNGFLTESYDELGNKYM 120
WDTAPAFEGRKEIWDAL AAA A E +D +LAQAI+DGANI++P+G LTE YDELGN+Y
Sbjct: 56 WDTAPAFEGRKEIWDALKAAAVALECSDHELAQAIVDGANITLPHGSLTECYDELGNRYQ 115
Query: 121 VPVYCLSYLKFLLLHMSQPLRHVLVCANCYFPHPGFLTESYDELGNKYMVPVYCLSYPIN 180
+PVYCL + P+N
Sbjct: 116 LPVYCL-------------------------------------------------APPVN 126
Query: 181 ITKETSGRDSPIEVFDLEEGVGGQ--EIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQS 238
+ E S D + D E Q E LK+RLS T +D+R+ +T+ ++KK+LQ+
Sbjct: 127 LISERSEED----LTDNPEPQTAQKKEFQLKVRLS-TGKDLRLNASMSDTIGLLKKQLQA 181
Query: 239 LEGIETSKQRWYYGGKLLSDKMKISDIQNLASGFVIQVIINNLA 282
E I+ S QRW++ GKLL+DK ++ D + + FVIQVI+N A
Sbjct: 182 QEDIDISHQRWFFSGKLLTDKTRLQDTK-IQKDFVIQVIVNQPA 224
>sp|Q9HAC8|UBTD1_HUMAN Ubiquitin domain-containing protein 1 OS=Homo sapiens GN=UBTD1 PE=1
SV=1
Length = 227
Score = 171 bits (432), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 149/285 (52%), Gaps = 59/285 (20%)
Query: 1 MGSCLSIRRRNHPDHRNSFDNANAPNAGLRKNHPLCHEIIRWKSDVPLTEGQLRSKRDEF 60
MG+C+ +RR P P +N PL E ++WKSD P+T+GQLRSKRDEF
Sbjct: 1 MGNCVGRQRRERPA------APGHPRKRAGRNEPLKKERLKWKSDYPMTDGQLRSKRDEF 54
Query: 61 WDTAPAFEGRKEIWDALHAAASAAEGNDFQLAQAILDGANISVPNGFLTESYDELGNKYM 120
WDTAPAFEGRKEIWDAL AAA AAE ND +LAQAILDGA+I++P+G L E YDELGN+Y
Sbjct: 55 WDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRYQ 114
Query: 121 VPVYCLSYLKFLLLHMSQPLRHVLVCANCYFPHPGFLTESYDELGNKYMVPVYCLSYPIN 180
+P+YCLS LLL ++ +P+
Sbjct: 115 LPIYCLSPPVNLLLEHTEEESLEPPEPPPSVRR----------------------EFPLK 152
Query: 181 ITKETSGRDSPIEVFDLEEGVGGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLE 240
+ T G+++ L L +T ++ ++ Q E
Sbjct: 153 VRLST-----------------GKDVRLSASLPDTVGQLKRQLHAQ-------------E 182
Query: 241 GIETSKQRWYYGGKLLSDKMKISDIQNLASGFVIQVIINNLAGPK 285
GIE S QRW++ GKLL+D+ ++ + + + FVIQVIIN P+
Sbjct: 183 GIEPSWQRWFFSGKLLTDRTRLQETK-IQKDFVIQVIINQPPPPQ 226
>sp|Q3ZBQ1|UBTD1_BOVIN Ubiquitin domain-containing protein 1 OS=Bos taurus GN=UBTD1 PE=2
SV=1
Length = 227
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 152/285 (53%), Gaps = 59/285 (20%)
Query: 1 MGSCLSIRRRNHPDHRNSFDNANAPNAGLRKNHPLCHEIIRWKSDVPLTEGQLRSKRDEF 60
MG+C+ +RR P P +N PL E ++WKSD P+T+GQLRSKRDEF
Sbjct: 1 MGNCVGRQRRERPT------APGHPRKRAGRNEPLKKERLKWKSDYPMTDGQLRSKRDEF 54
Query: 61 WDTAPAFEGRKEIWDALHAAASAAEGNDFQLAQAILDGANISVPNGFLTESYDELGNKYM 120
WDTAPAFEGRKEIWDAL AAA AAE ND +LAQAILDGA+I++P+G L E YDELGN+Y
Sbjct: 55 WDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRYQ 114
Query: 121 VPVYCLSYLKFLLLHMSQPLRHVLVCANCYFPHPGFLTESYDELGNKYMVPVYCLSYPIN 180
+P+YCLS LLL ++ +P+
Sbjct: 115 LPIYCLSPPVNLLLEHTEEESLEPPEPTPSVRR----------------------EFPLK 152
Query: 181 ITKETSGRDSPIEVFDLEEGVGGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLE 240
+ + ++G+D + L L +T ++ ++ TQ E
Sbjct: 153 V-RLSTGKD----------------VRLSASLPDTVGQLKRQLHTQ-------------E 182
Query: 241 GIETSKQRWYYGGKLLSDKMKISDIQNLASGFVIQVIINNLAGPK 285
GIE S QRW++ GKLL+D+ ++ + + + FVIQVIIN P+
Sbjct: 183 GIEPSWQRWFFSGKLLTDRTRLQETK-IQKDFVIQVIINQPPPPQ 226
>sp|Q6GL38|UBTD1_XENTR Ubiquitin domain-containing protein 1 OS=Xenopus tropicalis
GN=ubtd1 PE=2 SV=1
Length = 240
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 133/251 (52%), Gaps = 54/251 (21%)
Query: 1 MGSCLSIRRRNHPDHRNSFDNANAPNAGLRKNHPLCHEIIRWKSDVPLTEGQLRSKRDEF 60
MG C+ + ++ AG +N PL E RWKSD P+T+GQLRSKRDEF
Sbjct: 1 MGGCVGRPQGESQRSQSRASGQQRKRAG--RNEPLKKERPRWKSDYPMTDGQLRSKRDEF 58
Query: 61 WDTAPAFEGRKEIWDALHAAASAAEGNDFQLAQAILDGANISVPNGFLTESYDELGNKYM 120
WDTAPAFEGRKEIWDAL AAA A E ND +LAQAI+DGA+I++P+G LTE YDELG +Y
Sbjct: 59 WDTAPAFEGRKEIWDALKAAAFAVEANDHELAQAIVDGASITLPHGSLTECYDELGTRYQ 118
Query: 121 VPVYCLSYLKFLLLHMSQPLRHVLVCANCYFPHPGFLTESYDELGNKYMVPVYCLSYPIN 180
+PVYCL+ P + E +E G + P N
Sbjct: 119 LPVYCLA------------------------PPVNLIMERSEEDGTDALEPA------PN 148
Query: 181 ITKETSGRDSPIEVFDLEEGVGGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLE 240
+ E LK+RLS T +DV++ +T+ +KK+L ++E
Sbjct: 149 TRR---------------------EFQLKVRLS-TGKDVKLNASMVDTIGQLKKQLHAVE 186
Query: 241 GIETSKQRWYY 251
GIE QRW++
Sbjct: 187 GIEPCWQRWFF 197
>sp|Q68FV8|UBTD1_RAT Ubiquitin domain-containing protein 1 OS=Rattus norvegicus GN=Ubtd1
PE=2 SV=1
Length = 227
Score = 168 bits (426), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 153/285 (53%), Gaps = 59/285 (20%)
Query: 1 MGSCLSIRRRNHPDHRNSFDNANAPNAGLRKNHPLCHEIIRWKSDVPLTEGQLRSKRDEF 60
MG+C+ +RR P P +N PL E ++WKSD P+T+GQLRSKRDEF
Sbjct: 1 MGNCVGRQRRERPA------APGHPRKRAGRNEPLKKERLKWKSDYPMTDGQLRSKRDEF 54
Query: 61 WDTAPAFEGRKEIWDALHAAASAAEGNDFQLAQAILDGANISVPNGFLTESYDELGNKYM 120
WDTAPAFEGRKEIWDAL AAA AAE ND +LAQAILDGA+I++P+G L E YDELGN+Y
Sbjct: 55 WDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRYQ 114
Query: 121 VPVYCLSYLKFLLLHMSQPLRHVLVCANCYFPHPGFLTESYDELGNKYMVPVYCLSYPIN 180
+P+YCLS LLL + S
Sbjct: 115 LPIYCLSPPVNLLLEHT-----------------------------------EEESLEPP 139
Query: 181 ITKETSGRDSPIEVFDLEEGVGGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLE 240
+ R+ P++V L G +++ L L +T ++ ++ +QE
Sbjct: 140 EPTPSVRREFPLKV-RLSTG---KDVRLSASLPDTVGQLKRQLHSQE------------- 182
Query: 241 GIETSKQRWYYGGKLLSDKMKISDIQNLASGFVIQVIINNLAGPK 285
GIE S QRW++ GKLL+D+ ++ + + + FVIQVIIN P+
Sbjct: 183 GIEPSWQRWFFSGKLLTDRTRLQETK-IQKDFVIQVIINQPPPPQ 226
>sp|Q91WB7|UBTD1_MOUSE Ubiquitin domain-containing protein 1 OS=Mus musculus GN=Ubtd1 PE=2
SV=1
Length = 227
Score = 168 bits (425), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 153/285 (53%), Gaps = 59/285 (20%)
Query: 1 MGSCLSIRRRNHPDHRNSFDNANAPNAGLRKNHPLCHEIIRWKSDVPLTEGQLRSKRDEF 60
MG+C+ +RR P P +N PL E ++WKSD P+T+GQLRSKRDEF
Sbjct: 1 MGNCVGRQRRERPA------APGHPRKRAGRNEPLKKERLKWKSDYPMTDGQLRSKRDEF 54
Query: 61 WDTAPAFEGRKEIWDALHAAASAAEGNDFQLAQAILDGANISVPNGFLTESYDELGNKYM 120
WDTAPAFEGRKEIWDAL AAA AAE ND +LAQAILDGA+I++P+G L E YDELGN+Y
Sbjct: 55 WDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRYQ 114
Query: 121 VPVYCLSYLKFLLLHMSQPLRHVLVCANCYFPHPGFLTESYDELGNKYMVPVYCLSYPIN 180
+P+YCLS LLL + S
Sbjct: 115 LPIYCLSPPVNLLLEHT-----------------------------------EEESLEPP 139
Query: 181 ITKETSGRDSPIEVFDLEEGVGGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLE 240
+ R+ P++V L G +++ L L +T ++ ++ +QE
Sbjct: 140 EPTPSVRREFPLKV-RLSTG---KDVRLNASLPDTVGQLKRQLHSQE------------- 182
Query: 241 GIETSKQRWYYGGKLLSDKMKISDIQNLASGFVIQVIINNLAGPK 285
GIE S QRW++ GKLL+D+ ++ + + + FVIQVIIN P+
Sbjct: 183 GIEPSWQRWFFSGKLLTDRTRLQETK-IQKDFVIQVIINQPPPPQ 226
>sp|Q9HDW4|YFW7_SCHPO Uncharacterized protein PB2B4.07 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAPB2B4.07 PE=1 SV=1
Length = 239
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 48 LTEGQLRSKRDEFWDTAPAFEGRKEIWDALHAAASAAEGNDFQLAQAILDGANISVPNGF 107
LT+ ++ +R+EFW+T A+ G KEIWD LH + + + A + A++++P
Sbjct: 39 LTKEEVEVRRNEFWETCWAYGGSKEIWDVLHKVVTLLYEGNAEAATEMALAADLTIPEND 98
Query: 108 LTES-YDELGNKYMVP 122
+++ YD G Y +P
Sbjct: 99 ISKGVYDSKGTFYEIP 114
>sp|P42739|UBIQP_ACECL Polyubiquitin (Fragment) OS=Acetabularia cliftonii PE=3 SV=2
Length = 423
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +TV +K ++Q EGI +QR + GK L D +
Sbjct: 40 GGMQIFVK---TLTGKTITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLT 96
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES +V
Sbjct: 97 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTV 140
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +TV +K ++Q EGI +QR + GK L D
Sbjct: 116 GGMQIFVK---TLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 172
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES +V
Sbjct: 173 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTV 216
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +TV +K ++Q EGI +QR + GK L D
Sbjct: 192 GGMQIFVK---TLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 248
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES +V
Sbjct: 249 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTV 292
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +TV +K ++Q EGI +QR + GK L D
Sbjct: 268 GGMQIFVK---TLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 324
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES +V
Sbjct: 325 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTV 368
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +TV +K ++Q EGI +QR + GK L D
Sbjct: 344 GGMQIFVK---TLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRIIFAGKQLEDGRT 400
Query: 262 ISD 264
++D
Sbjct: 401 LAD 403
>sp|Q9FHQ6|UBQ9_ARATH Polyubiquitin 9 OS=Arabidopsis thaliana GN=UBQ9 PE=3 SV=1
Length = 322
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD-------IQN 267
T + + + V + +T+ +K ++Q +EGI +QR + GKLL D ++D I +
Sbjct: 11 TEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDSILH 70
Query: 268 LASGFV--IQVIINNLAGPKLVPPVESMKSV 296
LA +Q+ + L G + VES ++
Sbjct: 71 LALRLRGGMQIFVKTLTGKTITLEVESSDTI 101
Score = 38.9 bits (89), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I ++ + T + + ++V + +T +K ++Q EGI +QR + GK L D
Sbjct: 153 GGMQIFVR---TLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 209
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ +N L G + VES ++
Sbjct: 210 LADYNIQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTI 253
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EG+ +QR + GK L D
Sbjct: 77 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRT 133
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVES 292
++D IQ ++ ++ Q+ + L + VES
Sbjct: 134 LADYNIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVES 173
>sp|P0CG70|UBI4P_NEUCR Polyubiquitin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=ubi-4 PE=1 SV=1
Length = 305
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K+++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K+++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K+++Q EGI +QR + GK L D +SD IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K+++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD 264
+SD
Sbjct: 284 LSD 286
>sp|P0CG73|UBI1P_CANAX Polyubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1
Length = 229
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQN----- 267
T + + ++V + +T+ +K ++Q EGI +QR + GK L D +SD IQ
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
Query: 268 --LASGFVIQVIINNLAGPKLVPPVESMKSV 296
L S +Q+ + L G + VES ++
Sbjct: 69 LVLRSRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 35.8 bits (81), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD 264
+SD
Sbjct: 208 LSD 210
>sp|P42740|UBIQP_AGLNE Polyubiquitin OS=Aglaothamnion neglectum PE=2 SV=2
Length = 457
Score = 39.7 bits (91), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TITGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 303 GGMQIFVK---TLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 403
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISDIQNLASGFV- 273
T + + ++V + +T+ +K ++Q EGI +QR + GK L D +SD N +
Sbjct: 9 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNNQKESTLH 68
Query: 274 --------IQVIINNLAGPKLVPPVESMKSV 296
+Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 16/106 (15%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD-----------IQNLASGFVIQVIINNLAGPKLVPPVESMKSV 296
+SD + L G +Q+ + L G + VES ++
Sbjct: 284 LSDYNLQKESTLHLVLRLRGG--MQIFVKTLTGKTITLEVESSDTI 327
Score = 38.5 bits (88), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + + G + VES ++
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTITGKTITLEVESSDTI 175
Score = 35.4 bits (80), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 379 GGMQIFVK---TLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 435
Query: 262 ISD 264
+SD
Sbjct: 436 LSD 438
>sp|P69315|UBIQP_LINUS Polyubiquitin (Fragment) OS=Linum usitatissimum PE=3 SV=2
Length = 305
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I LK + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 40 GGMQIFLK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 96
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 97 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 140
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 116 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 172
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 173 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 216
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 192 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 248
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 249 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 292
>sp|Q39256|UBQ8_ARATH Polyubiquitin 8 OS=Arabidopsis thaliana GN=UBQ8 PE=3 SV=1
Length = 631
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISDIQNLASGFVI 274
TC+ + ++V + +T+ +K ++Q GI +QR +GG++L + D N+ G I
Sbjct: 484 TCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDY-NIQKGSTI 542
Query: 275 ----------QVIINNLAGPKLVPPVESMKSV 296
Q+ I L G ++ VES ++
Sbjct: 543 HQLFLQRGGMQIFIKTLTGKTIILEVESSDTI 574
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + + V T +++ +K ++Q+ EGI +QR + GK L D + ++D IQ ++
Sbjct: 11 TEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLH 70
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + V+S ++
Sbjct: 71 LVLRLRGGMQIFVQTLTGKTITLEVKSSDTI 101
Score = 35.4 bits (80), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I ++ + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 77 GGMQIFVQ---TLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRT 133
Query: 262 ISDIQNLASGFVIQVIINNLAGPKLVPPVESMKSVTSSS 300
++D N+ + +++ G ++ S K+ TS +
Sbjct: 134 LADY-NIQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDT 171
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+A +K+++Q EGI+ +Q + G+ L D +
Sbjct: 550 GGMQIFIK---TLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVT 606
Query: 262 ISD 264
+ D
Sbjct: 607 LGD 609
>sp|P0CG74|UBI4P_CANAX Polyubiquitin OS=Candida albicans GN=UBI4 PE=1 SV=1
Length = 305
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D +SD IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 35.4 bits (80), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD 264
+SD
Sbjct: 284 LSD 286
>sp|P0CG72|UBI4P_SCHPO Polyubiquitin OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=ubi4 PE=1 SV=1
Length = 382
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 327
Score = 38.1 bits (87), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D +SD IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 35.4 bits (80), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 303 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 262 ISD 264
+SD
Sbjct: 360 LSD 362
>sp|P0CG63|UBI4P_YEAST Polyubiquitin OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=UBI4 PE=1 SV=1
Length = 381
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 327
Score = 38.1 bits (87), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D +SD IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 303 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 262 ISD 264
+SD
Sbjct: 360 LSD 362
>sp|P0CG75|UBI4P_KLULA Polyubiquitin OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359
/ DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ubi4
PE=1 SV=1
Length = 381
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VES ++
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 327
Score = 37.7 bits (86), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D +SD IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 35.4 bits (80), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 303 GGMQIFVK---TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 262 ISD 264
+SD
Sbjct: 360 LSD 362
>sp|Q3E7K8|UBQ12_ARATH Polyubiquitin 12 OS=Arabidopsis thaliana GN=UBQ12 PE=3 SV=1
Length = 230
Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 221 MKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGFVI---- 274
++V + +T+ +K ++Q +EGI + R + GK L D ++D +Q ++ ++
Sbjct: 15 LEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLLLRFR 74
Query: 275 ---QVIINNLAGPKLVPPVESMKSV 296
Q+ + L G + VES ++
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTI 99
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRT 207
Query: 262 ISD 264
++D
Sbjct: 208 LAD 210
>sp|P0CH33|UBQ11_ARATH Polyubiquitin 11 OS=Arabidopsis thaliana GN=UBQ11 PE=1 SV=1
Length = 229
Score = 38.5 bits (88), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 34.7 bits (78), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD 264
++D
Sbjct: 208 LAD 210
>sp|Q2T9Q2|UBL4B_BOVIN Ubiquitin-like protein 4B OS=Bos taurus GN=UBL4B PE=2 SV=1
Length = 165
Score = 38.5 bits (88), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 206 IALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISDI 265
+ +KL L C +KV QE+VAM+KK + + +Q + G+LL+D ++SD
Sbjct: 3 LTVKLLLGRRCS---LKVSGQESVAMLKKLVSERLHVPEEQQHLLFRGQLLADDKRLSDY 59
Query: 266 QNLASGFVIQVIINNLAGP 284
+ + I V++ L P
Sbjct: 60 R-IGPNASISVVVRPLEKP 77
>sp|P0CH27|RL402_TRYCR Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi PE=2 SV=1
Length = 356
Score = 38.5 bits (88), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTI 175
Score = 38.5 bits (88), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTI 251
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D IQ ++
Sbjct: 9 TGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTIALEVESSDTI 99
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISDIQNLASGFVIQVIINNLAGPKLVPPVESM 293
++D N+ + +++ L G + P +E++
Sbjct: 284 LADY-NIQKESTLHLVL-RLRGGVMEPTLEAL 313
>sp|Q1EC66|UBQ3_ARATH Polyubiquitin 3 OS=Arabidopsis thaliana GN=UBQ3 PE=1 SV=1
Length = 306
Score = 38.5 bits (88), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 38.5 bits (88), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 34.7 bits (78), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD 264
++D
Sbjct: 284 LAD 286
>sp|P0CG83|UBIQP_HORVU Polyubiquitin (Fragment) OS=Hordeum vulgare PE=2 SV=1
Length = 171
Score = 38.5 bits (88), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 17 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 73
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 74 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 117
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 93 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 149
Query: 262 ISD 264
++D
Sbjct: 150 LAD 152
>sp|P0CG84|UBI4P_NICSY Polyubiquitin (Fragment) OS=Nicotiana sylvestris GN=UBI4 PE=2 SV=1
Length = 377
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 71 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 127
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 128 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 171
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 147 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 203
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 204 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 247
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 223 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 279
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 280 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 323
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D IQ ++
Sbjct: 5 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 64
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 65 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 95
Score = 34.7 bits (78), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 299 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 355
Query: 262 ISD 264
++D
Sbjct: 356 LAD 358
>sp|Q3E7T8|UBQ14_ARATH Polyubiquitin 14 OS=Arabidopsis thaliana GN=UBQ14 PE=1 SV=2
Length = 305
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 34.7 bits (78), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD 264
++D
Sbjct: 284 LAD 286
>sp|P69325|UBIQP_SOYBN Polyubiquitin OS=Glycine max GN=SUBI-1 PE=2 SV=2
Length = 305
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 34.7 bits (78), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD 264
++D
Sbjct: 284 LAD 286
>sp|P0CH32|UBQ4_ARATH Polyubiquitin 4 OS=Arabidopsis thaliana GN=UBQ4 PE=1 SV=1
Length = 382
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 327
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 303 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 262 ISD 264
++D
Sbjct: 360 LAD 362
>sp|P0CH05|UBI2P_PETCR Polyubiquitin OS=Petroselinum crispum GN=PCUBI4-2 PE=3 SV=1
Length = 458
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 327
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 303 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 403
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 379 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435
Query: 262 ISD 264
++D
Sbjct: 436 LAD 438
>sp|P0CH04|UBI1P_PETCR Polyubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=2 SV=1
Length = 458
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 327
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 303 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 403
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 379 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435
Query: 262 ISD 264
++D
Sbjct: 436 LAD 438
>sp|P69322|UBIQP_PEA Polyubiquitin OS=Pisum sativum GN=PU1 PE=2 SV=2
Length = 381
Score = 38.5 bits (88), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 38.5 bits (88), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 38.5 bits (88), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 327
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 303 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 262 ISD 264
++D
Sbjct: 360 LAD 362
>sp|Q58G87|UBQ3_ORYSJ Polyubiquitin 3 OS=Oryza sativa subsp. japonica GN=UBQ3 PE=2 SV=2
Length = 381
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 327
Score = 35.0 bits (79), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V +T+ +K ++Q EGI +QR + GK L D ++D IQ ++
Sbjct: 9 TGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 303 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 262 ISD 264
++D
Sbjct: 360 LAD 362
>sp|Q8H159|UBQ10_ARATH Polyubiquitin 10 OS=Arabidopsis thaliana GN=UBQ10 PE=1 SV=2
Length = 457
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 327
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 303 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 403
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 379 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435
Query: 262 ISD 264
++D
Sbjct: 436 LAD 438
>sp|P0CG85|UBI1P_NICSY Polyubiquitin OS=Nicotiana sylvestris GN=UBI11 PE=2 SV=1
Length = 457
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 327
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 303 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 403
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 379 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435
Query: 262 ISD 264
++D
Sbjct: 436 LAD 438
>sp|P69309|UBIQP_AVEFA Polyubiquitin OS=Avena fatua PE=2 SV=2
Length = 305
Score = 38.5 bits (88), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Score = 38.5 bits (88), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
++D IQ ++ ++ Q+ + L G + VES ++
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D IQ ++
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VES ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V + +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD 264
++D
Sbjct: 284 LAD 286
>sp|A3KMV2|RD23A_BOVIN UV excision repair protein RAD23 homolog A OS=Bos taurus GN=RAD23A
PE=2 SV=1
Length = 362
Score = 38.1 bits (87), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 217 QDVRMKVFTQETVAMIKKRLQSLEGIET---SKQRWYYGGKLLSDKMKISDIQNLASGFV 273
Q ++++ ETV ++K+++++ +G + + Q+ Y GK+LSD + I D + FV
Sbjct: 13 QTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDYRIDEKNFV 72
Query: 274 IQVIINNLAGPKLVPPVESMKSVTSSS 300
+ ++ P P E+ + T S
Sbjct: 73 VVMVTKAKTSPGTSVPSEASPTATPES 99
>sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A OS=Caenorhabditis elegans GN=ubq-1 PE=2 SV=1
Length = 838
Score = 38.1 bits (87), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 379 GGMQIFVKTLIGKT---ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI 479
Score = 37.7 bits (86), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI 175
Score = 37.7 bits (86), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI 251
Score = 37.7 bits (86), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI 327
Score = 37.7 bits (86), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 455 GGMQIFVK---TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI 555
Score = 37.7 bits (86), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 531 GGMQIFVK---TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI 631
Score = 37.7 bits (86), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 607 GGMQIFVK---TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI 707
Score = 37.7 bits (86), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 683 GGMQIFVK---TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI 783
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 303 GGMQIFVK---TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTI 403
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V +T+ +K ++Q EGI +QR + GK L D +SD IQ ++
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VE+ ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVEASDTI 99
Score = 35.0 bits (79), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 759 GGMQIFVK---TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 815
Query: 262 ISD 264
+SD
Sbjct: 816 LSD 818
>sp|P54725|RD23A_HUMAN UV excision repair protein RAD23 homolog A OS=Homo sapiens
GN=RAD23A PE=1 SV=1
Length = 363
Score = 38.1 bits (87), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 217 QDVRMKVFTQETVAMIKKRLQSLEGIET---SKQRWYYGGKLLSDKMKISDIQNLASGFV 273
Q ++++ ETV ++K+++++ +G + + Q+ Y GK+LSD + I D + FV
Sbjct: 13 QTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDYRIDEKNFV 72
Query: 274 IQVIINNLAGPKLVPPVESMKSVTSSS 300
+ ++ AG P E+ + S
Sbjct: 73 VVMVTKTKAGQGTSAPPEASPTAAPES 99
>sp|P59669|UBIQP_GEOCY Polyubiquitin OS=Geodia cydonium PE=2 SV=2
Length = 457
Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI 175
Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI 251
Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 284 LSDYNIQKESTLHLVVRLRGGMQIFVKTLTGKTITLEVEASDTI 327
Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 303 GGMQIFVK---TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI 403
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V +T+ +K ++Q EGI +QR + GK L D +SD IQ ++
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VE+ ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVEASDTI 99
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 379 GGMQIFVK---TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435
Query: 262 ISD 264
+SD
Sbjct: 436 LSD 438
>sp|Q8MKD1|UBB_HORSE Polyubiquitin-B OS=Equus caballus GN=UBB PE=2 SV=3
Length = 305
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR+ + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE ++
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 251
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE ++
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 175
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + ++V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD 264
+SD
Sbjct: 284 LSD 286
Score = 35.0 bits (79), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + ++V +T+ +K ++Q EGI +QR + GK L D +SD IQ ++
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VE ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 99
>sp|O14399|UBL1_SCHPO Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ubl1 PE=3 SV=1
Length = 78
Score = 37.7 bits (86), Expect = 0.12, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISDIQNLASGFVI 274
T +++ + + + V+ IK+R++ EGI S+QR Y GK ++D K ++ +L G V+
Sbjct: 9 TGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADD-KNAESYHLEGGSVL 67
Query: 275 QVII 278
+++
Sbjct: 68 HLVL 71
>sp|P0CG82|UBIQP_TETPY Polyubiquitin OS=Tetrahymena pyriformis GN=TU20 PE=3 SV=1
Length = 381
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + + V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 75 GGMQIFVK---TLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTI 175
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + + V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 151 GGMQIFVK---TLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTI 251
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + + V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 227 GGMQIFVK---TLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 262 ISD--IQNLASGFVI-------QVIINNLAGPKLVPPVESMKSV 296
+SD IQ ++ ++ Q+ + L G + VE+ ++
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTI 327
Score = 35.8 bits (81), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD--IQNLASGF 272
T + + + V +T+ +K ++Q EGI +QR + GK L D +SD IQ ++
Sbjct: 9 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
Query: 273 VI-------QVIINNLAGPKLVPPVESMKSV 296
++ Q+ + L G + VE+ ++
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLDVEASDTI 99
Score = 34.7 bits (78), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG +I +K + T + + + V +T+ +K ++Q EGI +QR + GK L D
Sbjct: 303 GGMQIFVK---TLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 262 ISD 264
+SD
Sbjct: 360 LSD 362
>sp|P0C032|RUB3_ORYSJ Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sativa
subsp. japonica GN=RUB3 PE=3 SV=2
Length = 154
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISDIQNLASGFVI 274
T +++ + + +TV IK+R++ EGI +QR YGGK L+D D + + +G V+
Sbjct: 85 TGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYK-IEAGSVL 143
Query: 275 QVII 278
+++
Sbjct: 144 HLVL 147
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD 264
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D
Sbjct: 9 TGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLAD 58
>sp|P0C030|RUB1_ORYSJ Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica
GN=RUB1 PE=2 SV=2
Length = 153
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG I +K + T +++ + + +T+ IK+R++ EGI +QR Y GK L+D
Sbjct: 75 GGTMIKVK---TLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 131
Query: 262 ISDIQNLASGFVIQVII 278
D N+ G V+ +++
Sbjct: 132 AKDY-NIEGGSVLHLVL 147
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD 264
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 58
>sp|Q9SHE7|RUB1_ARATH Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1
PE=1 SV=3
Length = 156
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 202 GGQEIALKLRLSNTCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMK 261
GG I +K + T +++ + + +T+ IK+R++ EGI +QR Y GK L+D
Sbjct: 75 GGTMIKVK---TLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 131
Query: 262 ISDIQNLASGFVIQVII 278
D N+ G V+ +++
Sbjct: 132 AKDY-NIEGGSVLHLVL 147
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 215 TCQDVRMKVFTQETVAMIKKRLQSLEGIETSKQRWYYGGKLLSDKMKISD 264
T + + ++V + +T+ +K ++Q EGI +QR + GK L D ++D
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 58
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,890,541
Number of Sequences: 539616
Number of extensions: 4810286
Number of successful extensions: 10424
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 9959
Number of HSP's gapped (non-prelim): 479
length of query: 300
length of database: 191,569,459
effective HSP length: 117
effective length of query: 183
effective length of database: 128,434,387
effective search space: 23503492821
effective search space used: 23503492821
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)