BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7994
(230 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase
20beta-Hydroxysteroid Dehydrogenase
Length = 288
Score = 201 bits (512), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 148/232 (63%), Gaps = 10/232 (4%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
VTGANKGIG+ IV+ L +QF G + LTARD +RGQ A+++LQ +LDI+D S
Sbjct: 9 VTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDIIDLQS 68
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
I+AL D L E+GG+DVLVNNAAIAF++++ PF QA TM+TN+ +VC L PL+
Sbjct: 69 IRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCTELLPLI 128
Query: 112 RSHGRVVNVSSSCG-HLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
+ GRVVNVSS+ G + S L++K E + EEL LMN+FVE ++G H K GW
Sbjct: 129 KPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVEDTKNGVHRKEGW 188
Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGP 222
+S Y TK+GV+ LS + L + + +++N PG+V TDM K P
Sbjct: 189 SDSTYGVTKIGVSVLSRIYARKLREQRAGDKILLNACCPGWVRTDMGGPKAP 240
>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp
pdb|3BHI|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Nadp
pdb|3BHJ|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Glutathione
pdb|3BHM|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With S-Hydroxymethylglutathione
Length = 276
Score = 201 bits (511), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 144/231 (62%), Gaps = 12/231 (5%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
VTG NKGIG IV+ L + F G + LTARD +RGQ A+++LQ +LDI D S
Sbjct: 9 VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQS 68
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
I+AL D L E+GG+DVLVNNA IAFKV PF QA TM+TN+F DVC L PL+
Sbjct: 69 IRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI 128
Query: 112 RSHGRVVNVSS--SCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
+ GRVVNVSS S L + E L++K E + EEL LMN+FVE + G H K G
Sbjct: 129 KPQGRVVNVSSIMSVRALKSCSPE-LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEG 187
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
WP+SAY TK+GVT LS + LS+ + +++N PG+V TDM+ K
Sbjct: 188 WPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK 238
>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2
Length = 276
Score = 197 bits (500), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 143/231 (61%), Gaps = 12/231 (5%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
VTG NKGIG IV+ L + F G + LTARD +RGQ A+++LQ +LDI D S
Sbjct: 9 VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQS 68
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
I+AL D L E+GG+DVLVNNA IAFKV PF QA TM+TN+F DV L PL+
Sbjct: 69 IRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVXTELLPLI 128
Query: 112 RSHGRVVNVSS--SCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
+ GRVVNVSS S L + E L++K E + EEL LMN+FVE + G H K G
Sbjct: 129 KPQGRVVNVSSIMSVRALKSCSPE-LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEG 187
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
WP+SAY TK+GVT LS + LS+ + +++N PG+V TDM+ K
Sbjct: 188 WPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK 238
>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed
With Nadp+
Length = 274
Score = 187 bits (476), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 145/237 (61%), Gaps = 10/237 (4%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
VTGAN+GIG I + L +QF G + LTARD +RGQ A+++LQ +LDI D S
Sbjct: 7 VTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDDLQS 66
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
I+AL D L E+GG++VLVNNAA+AFK + PF +A T++TN+FA ++C+ L P++
Sbjct: 67 IRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFDIKAEMTLKTNFFATRNMCNELLPIM 126
Query: 112 RSHGRVVNVSS-SCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
+ HGRVVN+SS C SE L+++ E + +L LM +FVE ++ H + GW
Sbjct: 127 KPHGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKFVEDTKNEVHEREGW 186
Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
PNS Y +KLGVT LS + L + + ++VN PG V TDM T+++
Sbjct: 187 PNSPYGVSKLGVTVLSRILARRLDEKRKADRILVNACCPGPVKTDMDGKDSIRTVEE 243
>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver
Somniferum
Length = 311
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 132/272 (48%), Gaps = 51/272 (18%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQ----------KLDILDK 49
VTG NKGIG+ I K L +GI + LT RD ++G EA+EKL+ +LD+ D
Sbjct: 17 VTGGNKGIGFEICKQLSS--NGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDP 74
Query: 50 -NSIKALHDHLEAEHGGVDVLVNNAAIA-FKVNS---------------------SEPFG 86
++ +L D ++ G +D+LVNNA +A F V++ +P
Sbjct: 75 IATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEA 134
Query: 87 SQ--------ALHTMRTNYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSE-AL 135
+ A ++ NY + V ++L PLL+ R+VNVSSS G L +V++E AL
Sbjct: 135 QELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETAL 194
Query: 136 KKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQ 195
+ + + E + ++N ++ ++ GWP+ A T +K + +
Sbjct: 195 EILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYT---TSKACLNAYTRVLA 251
Query: 196 DAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQ 227
+ I + VNCV PG V T+M+ G G T ++
Sbjct: 252 NKIPK-FQVNCVCPGLVKTEMNYGIGNYTAEE 282
>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASU|B Chain B, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASV|A Chain A, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|B Chain B, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|C Chain C, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|D Chain D, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|E Chain E, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|F Chain F, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
Length = 248
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKA 54
VTGA G G I + IQQ +I T R R QE ++L +LD+ ++ +I+
Sbjct: 5 VTGATAGFGECITRRFIQQGHKVI-ATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEE 63
Query: 55 LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTM-RTNYFALIDVCDILFPLL-- 111
+ L AE +D+LVNNA +A + + + TM TN L+ + + P +
Sbjct: 64 MLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVE 123
Query: 112 RSHGRVVNVSSSCG 125
R+HG ++N+ S+ G
Sbjct: 124 RNHGHIINIGSTAG 137
>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
pdb|1VL8|B Chain B, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
Length = 267
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 58/230 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKN 50
VTG ++G+G+GI +GL + ++ + +R+ EA +KL + D+ +
Sbjct: 26 VTGGSRGLGFGIAQGLAEAGCSVV-VASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYE 84
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
+K L + ++ + G +D +VN A I + + E + + N F VC F L
Sbjct: 85 EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL 144
Query: 111 LRS--HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
LR + ++N+ S +VEE++
Sbjct: 145 LRESDNPSIINIGSL---------------------TVEEVTM----------------- 166
Query: 169 GWPN-SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
PN SAYAA+K GV L+ L+++ R + VN + PG+ T M+
Sbjct: 167 --PNISAYAASKGGVASLT----KALAKEWGRYGIRVNVIAPGWYRTKMT 210
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 59/228 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
VTGA++GIG I + L ++ +I ++ G +A+ K L++ + SI+
Sbjct: 17 VTGASRGIGKAIAELLAERGAKVIGTATSES--GAQAISDYLGDNGKGMALNVTNPESIE 74
Query: 54 ALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
A+ + E GGVD+LVNNAAI + E S + T T+ F L +L +
Sbjct: 75 AVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFRLSKA--VLRGM 132
Query: 111 LRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
++ GR++NV S G T G
Sbjct: 133 MKKRQGRIINVGSVVG----------------------------------------TMGN 152
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
+ YAA K GV + F + ++++ + VN V PG++ TDM+
Sbjct: 153 AGQANYAAAKAGV--IGFTKS--MAREVASRGVTVNTVAPGFIETDMT 196
>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|B Chain B, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|C Chain C, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|D Chain D, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
Length = 246
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 57/227 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL-----DILDKNSIKAL 55
VTGA G+G I + L Q + R+ + A E +++ ++ D+ ++KAL
Sbjct: 12 VTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSDREAVKAL 71
Query: 56 HDHLEAEHGGVDVLVNNAAI---AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL- 111
E E GGVD+LVNNA I V S+ L T+ F L ++ P++
Sbjct: 72 GQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTR--ELTHPMMR 129
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
R +GR++N++S G VT G P
Sbjct: 130 RRNGRIINITSIVG----VT-------------------------------------GNP 148
Query: 172 NSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
A Y A+K G+ S L+Q+ ++ VNC+ PG++ + M+
Sbjct: 149 GQANYCASKAGLIGFS----KSLAQEIASRNVTVNCIAPGFIESAMT 191
>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|B Chain B, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|C Chain C, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|D Chain D, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
Length = 249
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 57/227 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL-----DILDKNSIKAL 55
VTGA G+G I + L Q + R+ + A E +++ ++ D+ ++KAL
Sbjct: 15 VTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSDREAVKAL 74
Query: 56 HDHLEAEHGGVDVLVNNAAI---AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL- 111
E E GGVD+LVNNA I V S+ L T+ F L ++ P++
Sbjct: 75 GQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTR--ELTHPMMR 132
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
R +GR++N++S G VT G P
Sbjct: 133 RRNGRIINITSIVG----VT-------------------------------------GNP 151
Query: 172 NSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
A Y A+K G+ S L+Q+ ++ VNC+ PG++ + M+
Sbjct: 152 GQANYCASKAGLIGFS----KSLAQEIASRNVTVNCIAPGFIESAMT 194
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 59/228 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
VTGA++GIG I + L ++ +I ++ G +A+ K L++ + SI+
Sbjct: 17 VTGASRGIGKAIAELLAERGAKVIGTATSES--GAQAISDYLGDNGKGMALNVTNPESIE 74
Query: 54 ALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
A+ + E GGVD+LVNNA I + E S + T T+ F L +L +
Sbjct: 75 AVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKA--VLRGM 132
Query: 111 LRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
++ GR++NV S G T G
Sbjct: 133 MKKRQGRIINVGSVVG----------------------------------------TMGN 152
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
+ YAA K GV + F + ++++ + VN V PG++ TDM+
Sbjct: 153 AGQANYAAAKAGV--IGFTKS--MAREVASRGVTVNTVAPGFIETDMT 196
>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
pdb|3U09|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
Length = 251
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 59/228 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
VTGA++GIG I + L ++ +I ++ G +A+ K L++ + SI+
Sbjct: 17 VTGASRGIGKAIAELLAERGAKVIGTATSES--GAQAISDYLGDNGKGMALNVTNPESIE 74
Query: 54 ALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
A+ + E GGVD+LVNNA I + E S + T T+ F L +L +
Sbjct: 75 AVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFRLSKA--VLRGM 132
Query: 111 LRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
++ GR++NV S G T G
Sbjct: 133 MKKRQGRIINVGSVVG----------------------------------------TMGN 152
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
+ YAA K GV + F + ++++ + VN V PG++ TDM+
Sbjct: 153 AGQANYAAAKAGV--IGFTKS--MAREVASRGVTVNTVAPGFIETDMT 196
>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
Length = 251
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 95/228 (41%), Gaps = 59/228 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
VTGA++GIG I + L ++ +I ++ G +A+ K L++ + SI+
Sbjct: 17 VTGASRGIGKAIAELLAERGAKVIGTATSES--GAQAISDYLGDNGKGMALNVTNPESIE 74
Query: 54 ALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
A+ + E GGVD+LVNNA I + E S + T T+ F L +L +
Sbjct: 75 AVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKA--VLRGM 132
Query: 111 LRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
++ GR++NV S G T G
Sbjct: 133 MKKRQGRIINVGSVVG----------------------------------------TMGN 152
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
+ +AA K GV + F + ++++ + VN V PG++ TDM+
Sbjct: 153 AGQANFAAAKAGV--IGFTKS--MAREVASRGVTVNTVAPGFIETDMT 196
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 59/228 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
VTGA++GIG I + L ++ +I ++ G +A+ K L++ + SI+
Sbjct: 17 VTGASRGIGKAIAELLAERGAKVIGTATSES--GAQAISDYLGDNGKGMALNVTNPESIE 74
Query: 54 ALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
A+ + E GGVD+LVNNA I + E S + T T+ F L +L +
Sbjct: 75 AVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKA--VLRGM 132
Query: 111 LRS-HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
++ GR++NV S G T G
Sbjct: 133 MKKRQGRIINVGSVVG----------------------------------------TMGN 152
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
+ YAA K GV + F + ++++ + VN V PG + TDM+
Sbjct: 153 AGQANYAAAKAGV--IGFTKS--MAREVASRGVTVNTVAPGAIETDMT 196
>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|B Chain B, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|C Chain C, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|D Chain D, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
Length = 262
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 59/232 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR-----------GQEALEKLQKLDILDK 49
VTGA++GIG I + L + LTARD + G EA + D+
Sbjct: 34 VTGASRGIGAAIARKL-GSLGARVVLTARDVEKLRAVEREIVAAGGEA--ESHACDLSHS 90
Query: 50 NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
++I A + A HG DVLVNNA + + FG LHTM+ + + ++ P
Sbjct: 91 DAIAAFATGVLAAHGRCDVLVNNAGVGW-------FGGP-LHTMKPAEWDALIAVNLKAP 142
Query: 110 --LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
LLR+ + +++ GH+ +++S A K + DG
Sbjct: 143 YLLLRAFAPAM-IAAKRGHIINISSLAGKNPV---------------------ADG---- 176
Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
+AY A+K G+ L L Q +R V+ V PG V T+ G
Sbjct: 177 -----AAYTASKWGLNGLMTSAAEELRQHQVR----VSLVAPGSVRTEFGVG 219
>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From
Streptococcus Suis Type 2
pdb|3O03|A Chain A, Quaternary Complex Structure Of Gluconate 5-Dehydrogenase
From Streptococcus Suis Type 2
Length = 291
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIY--LTARDASRGQEALEKL------QKLDILDKNSI 52
VTGA+ GIG+ I + I++ + RG A + D+ D++ I
Sbjct: 39 VTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGI 98
Query: 53 KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL- 111
+A+ +E+E G +D+LVNNA I +V E +Q + + A V + P +
Sbjct: 99 QAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMI 158
Query: 112 -RSHGRVVNVSSSCGHLCHVTSEA 134
+ HG+++N+ S L T A
Sbjct: 159 KKGHGKIINICSMMSELGRETVSA 182
>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIV|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
Length = 267
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 62/231 (26%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE---------KLQKLDILDKNS 51
VTGA+KGIG I + L I RDA+ QE L +L D+ ++
Sbjct: 31 VTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQ 90
Query: 52 IKALHDHLEAEHGGVDVLVNNAAI----AFKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
+ + +H A+HG +V+NA I AF S++ + + +HT +++ +I C +
Sbjct: 91 CREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDA-VIHTNLDSFYNVIQPC--I 147
Query: 108 FPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
P++ R GR++ +SS G + +
Sbjct: 148 MPMIGARQGGRIITLSSVSGVMGN------------------------------------ 171
Query: 166 TKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
+G SA A +G TK L+ + + + VNC+ PG ++T M
Sbjct: 172 -RGQVNYSAAKAGIIGATK-------ALAIELAKRKITVNCIAPGLIDTGM 214
>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
Length = 270
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 56/230 (24%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDA-SRG------QEALE-KLQKLDILDKNSI 52
VTGA++GIG I L ++ +I +A + G Q LE + L++ D ++
Sbjct: 33 VTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAV 92
Query: 53 KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCD-ILFPLL 111
AL + E G ++VLVNNA I + + + TN A+ + +L P++
Sbjct: 93 DALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMM 152
Query: 112 RSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
++ GR+VN++S G G
Sbjct: 153 KARGGRIVNITSVVGS-----------------------------------------AGN 171
Query: 171 PNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
P YAA K GV ++ L+++ + VNCV PG+++TDM+ G
Sbjct: 172 PGQVNYAAAKAGVAGMTR----ALAREIGSRGITVNCVAPGFIDTDMTKG 217
>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 256
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 63/231 (27%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
VTG GIG I + L + ++ ++ R + LE + L ++ D +S
Sbjct: 18 VTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDS 77
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIA----FKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
K D ++AE G +DVLVNNA I F+ + E + QA+ + TN +L +V +
Sbjct: 78 TKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDW--QAV--IDTNLTSLFNVTKQV 133
Query: 108 FPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSH 165
+ R GR++N+SS G
Sbjct: 134 IDGMVERGWGRIINISSVNGQ--------------------------------------- 154
Query: 166 TKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
KG + + Y+ K G+ + L+Q+ + + VN V PGY+ TDM
Sbjct: 155 -KGQFGQTNYSTAKAGIHGFTM----SLAQEVATKGVTVNTVSPGYIGTDM 200
>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|B Chain B, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|C Chain C, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|D Chain D, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|E Chain E, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|F Chain F, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|G Chain G, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|H Chain H, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1Q7B|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|C Chain C, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|D Chain D, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
Length = 244
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 57/227 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
VTGA++GIG I + L + G + + G +A+ K L++ D SI+
Sbjct: 10 VTGASRGIGRAIAETLAAR--GAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIE 67
Query: 54 ALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
++ + + AE G VD+LVNNA I + + + + T ++ F L + +
Sbjct: 68 SVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAV-MRAMM 126
Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
+ HGR++ + S G + + GG
Sbjct: 127 KKRHGRIITIGSVVGTMGN--------------------------------------GGQ 148
Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
N YAA K G+ S L+++ + VN V PG++ TDM+
Sbjct: 149 AN--YAAAKAGLIGFS----KSLAREVASRGITVNVVAPGFIETDMT 189
>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
Length = 267
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 84/225 (37%), Gaps = 53/225 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
VTGA++GIG I L ++ A A+ +E K++ + D+ D +
Sbjct: 32 VTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAA 91
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
++ L E GGVDVLVNNA I +E + + N + L
Sbjct: 92 VRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRL 151
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
R GR++N S+S + LLH +
Sbjct: 152 RVGGRIINXSTS------------QVGLLHPSYGI------------------------- 174
Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
YAA K GV + +LS++ D+ VN V PG TD+
Sbjct: 175 ---YAAAKAGVEAXTH----VLSKELRGRDITVNAVAPGPTATDL 212
>pdb|1SNY|A Chain A, Carbonyl Reductase Sniffer Of D. Melanogaster
Length = 267
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 47/241 (19%)
Query: 1 VTGANKGIGYGIVKGLIQ--QFDGIIYLTARDASRGQEALEKLQK---------LDILDK 49
+TG N+G+G G+VK L+ Q ++ T R+ + +E LE L K +D+ +
Sbjct: 26 ITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDLRNF 84
Query: 50 NSIKALHDHLEA--EHGGVDVLVNNAAIAFKVNSSEPFGSQA-LHTMRTNYFALIDVCDI 106
++ L +E + G++VL NNA IA K SQ L T++TN I +
Sbjct: 85 DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIXLAKA 144
Query: 107 LFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
PLL+ + N S G +A++N L +T
Sbjct: 145 CLPLLKKAAK-ANESQPXG---------------------VGRAAIINXSSILGSIQGNT 182
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHAL--LSQDAIREDLVVNCVHPGYVNTDMSSGKGPLT 224
GG AY +K S L A LS D + + +HPG+V TD PL
Sbjct: 183 DGG--XYAYRTSK------SALNAATKSLSVDLYPQRIXCVSLHPGWVKTDXGGSSAPLD 234
Query: 225 I 225
+
Sbjct: 235 V 235
>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|B Chain B, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|C Chain C, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|D Chain D, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
Length = 287
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 20/149 (13%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------------LD 45
+TGA+ GIG ++ +G + L A+R E LE+L+K LD
Sbjct: 38 ITGASAGIGKATALEYLEASNGDMKLIL--AARRLEKLEELKKTIDQEFPNAKVHVAQLD 95
Query: 46 ILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVC 104
I IK ++L E +D+LVNNA A + ++ + TN ALI++
Sbjct: 96 ITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINIT 155
Query: 105 DILFPLL--RSHGRVVNVSSSCGHLCHVT 131
+ P+ ++ G +VN+ S G + T
Sbjct: 156 QAVLPIFQAKNSGDIVNLGSIAGRDAYPT 184
>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
pdb|1Q7C|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
Length = 244
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 61/229 (26%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
VTGA++GIG I + L + G + + G +A+ K L++ D SI+
Sbjct: 10 VTGASRGIGRAIAETLAAR--GAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIE 67
Query: 54 ALHDHLEAEHGGVDVLVNNAAIA-----FKVNSSEPFGSQALHTMRTNYFALIDVCDILF 108
++ + + AE G VD+LVNNA I ++ E + + T ++ F L +
Sbjct: 68 SVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEW--NDIIETNLSSVFRLSKAV-MRA 124
Query: 109 PLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
+ + HGR++ + S G + + G
Sbjct: 125 MMKKRHGRIITIGSVVGTMGN--------------------------------------G 146
Query: 169 GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
G N +AA K G+ S L+++ + VN V PG++ TDM+
Sbjct: 147 GQAN--FAAAKAGLIGFS----KSLAREVASRGITVNVVAPGFIETDMT 189
>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|B Chain B, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|C Chain C, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|D Chain D, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
Length = 244
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 33/161 (20%)
Query: 1 VTGANKGIGYGIVKGLIQ------QFDGIIYLTARDAS---------RGQEALEKLQKLD 45
+TGA KGIG I + F+ ++ L++R A+ R + AL D
Sbjct: 7 ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITAD 66
Query: 46 ILDKNSIKALHDHLEAEHGGVDVLVNNAAI----AFKVNSSEPFGSQALHTMRTNYFALI 101
I D ++ L H+ +G +D LVNNA + A + E F +TM TN
Sbjct: 67 ISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFD----YTMNTNLKGTF 122
Query: 102 DVCDILFPLL-RSHGRVVNVSSSCGHLCHVTSEALKKKLLH 141
+ LF L+ R H GH+ +TS A K H
Sbjct: 123 FLTQALFALMERQHS---------GHIFFITSVAATKAFRH 154
>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
pdb|2NM0|B Chain B, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
Length = 253
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 53/221 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
VTG N+GIG I + D + +T R + L K DI D ++ + +E
Sbjct: 26 VTGGNRGIGLAIARAFADAGDKV-AITYRSGEPPEGFLA--VKCDITDTEQVEQAYKEIE 82
Query: 61 AEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS-HGR 116
HG V+VL+ NA + + SE + + T T F ++ + +LR+ GR
Sbjct: 83 ETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRAN--RAMLRAKKGR 140
Query: 117 VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYA 176
VV +SS G L G + YA
Sbjct: 141 VVLISSVVGLL----------------------------------------GSAGQANYA 160
Query: 177 ATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
A+K G+ + F + L+++ ++ N V PG+V+TDM+
Sbjct: 161 ASKAGL--VGFARS--LARELGSRNITFNVVAPGFVDTDMT 197
>pdb|3OP4|A Chain A, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
pdb|3OP4|B Chain B, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
Length = 248
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 88/227 (38%), Gaps = 57/227 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
VTGA++GIG I + L ++ +I ++ G +A+ K L++ + SI+
Sbjct: 14 VTGASRGIGKAIAELLAERGAKVIGTATSES--GAQAISDYLGDNGKGXALNVTNPESIE 71
Query: 54 ALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
A+ + E GGVD+LVNNA I E S T T+ F L +
Sbjct: 72 AVLKAITDEFGGVDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFRLSKAV-LRGXX 130
Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
+ GR++NV S G T G
Sbjct: 131 KKRQGRIINVGSVVG----------------------------------------TXGNA 150
Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
+ YAA K GV + F + +++ + VN V PG++ TD +
Sbjct: 151 GQANYAAAKAGV--IGFTKSX--AREVASRGVTVNTVAPGFIETDXT 193
>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI1|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI2|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|H Chain H, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|D Chain D, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|F Chain F, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
Length = 263
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 86/224 (38%), Gaps = 53/224 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKN 50
+TG++ GIG I +G ++ I+ L AR R EA L++ +D+
Sbjct: 12 ITGSSSGIGLAIAEGFAKEGAHIV-LVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPE 70
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
+ A+ + + + GG D+LVNNA E + + A + + L P
Sbjct: 71 GVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELHVMAAVRLARGLVPG 130
Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
+R+ G G + H S I +V+ L W
Sbjct: 131 MRARG--------GGAIIHNAS----------ICAVQPL--------------------W 152
Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
Y TK + S L+ + I++++ VNC++PG + T
Sbjct: 153 YEPIYNVTKAALMMFS----KTLATEVIKDNIRVNCINPGLILT 192
>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|B Chain B, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|C Chain C, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|D Chain D, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|E Chain E, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|F Chain F, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|G Chain G, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|H Chain H, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
Length = 246
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 89/230 (38%), Gaps = 59/230 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
VTGA++GIG I L +Q ++ A + + E +++++KL D+ +
Sbjct: 9 VTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAED 68
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDIL---F 108
+ + G VD+LVNNA + K N + T+ + +C F
Sbjct: 69 VTNMVKQTVDVFGQVDILVNNAGVT-KDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRF 127
Query: 109 PLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
+ + HGR+VN++S G VT
Sbjct: 128 MMRQRHGRIVNIASVVG----VT------------------------------------- 146
Query: 169 GWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
G P A Y A K GV L+ L+ ++ VN + PG++ TDM+
Sbjct: 147 GNPGQANYVAAKAGVIGLTKTSAKELAS----RNITVNAIAPGFIATDMT 192
>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
Length = 263
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 85/224 (37%), Gaps = 53/224 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKN 50
+TG++ GIG I +G ++ I+ L AR R EA L++ +D+
Sbjct: 12 ITGSSSGIGLAIAEGFAKEGAHIV-LVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPE 70
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
+ A+ + + + GG D+LVNNA E + A + + L P
Sbjct: 71 GVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPG 130
Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
+R+ G G + H S I +V+ L W
Sbjct: 131 MRARG--------GGAIIHNAS----------ICAVQPL--------------------W 152
Query: 171 PNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
Y TK + S L+ + I++++ VNC++PG + T
Sbjct: 153 YEPIYNVTKAALMMFS----KTLATEVIKDNIRVNCINPGLILT 192
>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DBZ|B Chain B, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
VTGA GIG I + L ++ G+ +++ AR + L++L++ D+
Sbjct: 31 VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
I+AL + +G VDVLVNNA ++E L + TN + V +
Sbjct: 89 EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 148
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
L R GR+VN++S+ G K+ L+H
Sbjct: 149 GGMLERGTGRIVNIASTGG----------KQGLVHA------------------------ 174
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
+ Y+A+K GV + L + R + VN V PG+V T M++
Sbjct: 175 ------APYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 216
>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Paratuberculosis
Length = 291
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 25/133 (18%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDILDKNSIKA 54
+TGAN G+G + L ++ +I + RD +G+ A + ++LD+ D +S++
Sbjct: 21 ITGANSGLGAVTARELARRGATVI-MAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRR 79
Query: 55 LHDHLEAEHGGVDVLVNNAAI-----AFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
D + G DVL+NNA I A V+ F SQ + TN+ + ++L P
Sbjct: 80 FADGVS----GADVLINNAGIMAVPYALTVDG---FESQ----IGTNHLGHFALTNLLLP 128
Query: 110 LLRSHGRVVNVSS 122
L RVV VSS
Sbjct: 129 RLTD--RVVTVSS 139
>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTD|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTE|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTE|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTX|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
pdb|2DTX|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
Length = 264
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
VTGA+ GIG I + + + +I L+ D G+ + ++ D+ + + +KA DH+
Sbjct: 13 VTGASMGIGRAIAERFVDEGSKVIDLSIHDP--GEAKYDHIE-CDVTNPDQVKASIDHIF 69
Query: 61 AEHGGVDVLVNNAAI 75
E+G + VLVNNA I
Sbjct: 70 KEYGSISVLVNNAGI 84
>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of
Thermoplasma Acidophilum Aldohexose Dehydrogenase
(Aldt)
pdb|2ZK7|B Chain B, Structure Of A C-Terminal Deletion Mutant Of
Thermoplasma Acidophilum Aldohexose Dehydrogenase
(Aldt)
Length = 257
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
VTGA+ GIG I + + + +I L+ D G+ + ++ D+ + + +KA DH+
Sbjct: 20 VTGASMGIGRAIAERFVDEGSKVIDLSIHDP--GEAKYDHIE-CDVTNPDQVKASIDHIF 76
Query: 61 AEHGGVDVLVNNAAI 75
E+G + VLVNNA I
Sbjct: 77 KEYGSISVLVNNAGI 91
>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC0|B Chain B, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
VTGA GIG I + L ++ G+ +++ AR + L++L++ D+
Sbjct: 31 VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
I+AL + +G VDVLVNNA ++E L + TN + V +
Sbjct: 89 EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 148
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
L R GR+VN++S+ G K+ ++H
Sbjct: 149 GGMLERGTGRIVNIASTGG----------KQGVVH------------------------- 173
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
+ Y+A+K GV + L + R + VN V PG+V T M++
Sbjct: 174 -----AAPYSASKHGVVGFT----KALGLELARTGITVNAVCPGWVETPMAA 216
>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC1|B Chain B, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
VTGA GIG I + L ++ G+ +++ AR + L++L++ D+
Sbjct: 31 VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
I+AL + +G VDVLVNNA ++E L + TN + V +
Sbjct: 89 EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 148
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
L R GR+VN++S+ G K+ ++H
Sbjct: 149 GGMLERGTGRIVNIASTGG----------KQGVVHA------------------------ 174
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
+ Y+A+K GV + L + R + VN V PG+V T M++
Sbjct: 175 ------APYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 216
>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase
pdb|1W4Z|B Chain B, Structure Of Actinorhodin Polyketide (Actiii) Reductase
Length = 281
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
VTGA GIG I + L ++ G+ +++ AR + L++L++ D+
Sbjct: 31 VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
I+AL + +G VDVLVNNA ++E L + TN + V +
Sbjct: 89 EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 148
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
L R GR+VN++S+ G K+ ++H
Sbjct: 149 GGMLERGTGRIVNIASTGG----------KQGVVHA------------------------ 174
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
+ Y+A+K GV + L + R + VN V PG+V T M++
Sbjct: 175 ------APYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 216
>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RH4|B Chain B, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RHC|B Chain B, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
pdb|2RHC|A Chain A, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
Length = 277
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
VTGA GIG I + L ++ G+ +++ AR + L++L++ D+
Sbjct: 27 VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
I+AL + +G VDVLVNNA ++E L + TN + V +
Sbjct: 85 EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 144
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
L R GR+VN++S+ G K+ ++H
Sbjct: 145 GGMLERGTGRIVNIASTGG----------KQGVVH------------------------- 169
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
+ Y+A+K GV + L + R + VN V PG+V T M++
Sbjct: 170 -----AAPYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 212
>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7G|B Chain B, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7H|A Chain A, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1X7H|B Chain B, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1XR3|A Chain A, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
pdb|1XR3|B Chain B, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
Length = 261
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
VTGA GIG I + L ++ G+ +++ AR + L++L++ D+
Sbjct: 11 VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 68
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
I+AL + +G VDVLVNNA ++E L + TN + V +
Sbjct: 69 EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 128
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
L R GR+VN++S+ G K+ ++H
Sbjct: 129 GGMLERGTGRIVNIASTGG----------KQGVVH------------------------- 153
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
+ Y+A+K GV + L + R + VN V PG+V T M++
Sbjct: 154 -----AAPYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 196
>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|E Chain E, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|F Chain F, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|G Chain G, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|H Chain H, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
Length = 255
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIY--------LTARDASRGQEALEKLQKLDILDKNSI 52
VTG+ GIG GI + L + I+ A A G +A+ D+ D I
Sbjct: 9 VTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVH--HPADLSDVAQI 66
Query: 53 KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL-HTMRTNYFALIDVCDILFPLL 111
+AL E E GGVD+LVNNA I V E F ++ + N A+ + P +
Sbjct: 67 EALFALAEREFGGVDILVNNAGIQ-HVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGM 125
Query: 112 RSH--GRVVNVSSSCG 125
R+ GR++N++S G
Sbjct: 126 RARNWGRIINIASVHG 141
>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
Length = 317
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 47/179 (26%)
Query: 42 QKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALI 101
++ D+ D S++A+ D AE G +D+LV+N I+ + Q ++TN
Sbjct: 112 RQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAW 171
Query: 102 DVCDILFPLLRSHGR---VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE 158
C + P + G+ V+ VSS+ G
Sbjct: 172 HACRAVLPSMIERGQGGSVIFVSSTVG--------------------------------- 198
Query: 159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
+G S YAA+K GV L L+ + R ++ VN V+PG VNT+M+
Sbjct: 199 -------LRGAPGQSHYAASKHGVQGLML----SLANEVGRHNIRVNSVNPGAVNTEMA 246
>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
pdb|2RHR|A Chain A, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
Length = 277
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
VTGA GIG I + L ++ G+ +++ AR + L++L++ D+
Sbjct: 27 VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
I+AL + +G VDVLVNNA ++E L + TN + V +
Sbjct: 85 EIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 144
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
L R GR+VN++S+ G K+ ++H
Sbjct: 145 GGMLERGTGRIVNIASTGG----------KQGVVHA------------------------ 170
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
+ Y+A+K GV + L + R + VN V PG+V T M++
Sbjct: 171 ------APYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 212
>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3CSD|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3QRW|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3QRW|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3RI3|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3RI3|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
Length = 281
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 60/232 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK---------LDILDKN 50
VTGA GIG I + L ++ G+ +++ AR + L++L++ D+
Sbjct: 31 VTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
I+AL + +G VDVLVNNA ++E L + TN + V +
Sbjct: 89 EIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 148
Query: 110 ---LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHT 166
L R GR+VN++S+ G K+ ++H
Sbjct: 149 GGMLERGTGRIVNIASTGG----------KQGVVHA------------------------ 174
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
+ Y+A+K GV + L + R + VN V PG+V T M++
Sbjct: 175 ------APYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 216
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 92/228 (40%), Gaps = 56/228 (24%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
VTGA +GIG I K L + +I ++ R +++++ D+ K
Sbjct: 49 VTGAGRGIGREIAKMLAKSVSHVICIS-RTQKSCDSVVDEIKSFGYESSGYAGDVSKKEE 107
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
I + + + EH VD+LVNNA I + +RTN +L + + +
Sbjct: 108 ISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRM 167
Query: 112 --RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
+GR++N+SS G +V G
Sbjct: 168 INNRYGRIINISSIVGLTGNV--------------------------------------G 189
Query: 170 WPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
N Y+++K GV + F + L+++ ++ VN + PG++++DM+
Sbjct: 190 QAN--YSSSKAGV--IGFTKS--LAKELASRNITVNAIAPGFISSDMT 231
>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|B Chain B, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|C Chain C, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|D Chain D, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
Length = 266
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 86/241 (35%), Gaps = 85/241 (35%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK------LDILDKNSIKA 54
VTGA GIG I + Q I+ L + +E L K ++ D+ SIK
Sbjct: 32 VTGATGGIGEAIARCFHAQ-GAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQ 90
Query: 55 LHDHLEAEHGGVDVLVNNAAI------------------AFKVNSSEPFGSQALHTMRTN 96
L + E E G+D+LVNNA I A + ++ + +H+M
Sbjct: 91 LAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSM--- 147
Query: 97 YFALIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEF 156
+ R +GR++N++S G +
Sbjct: 148 -------------MRRRYGRIINITSIVGVV----------------------------- 165
Query: 157 VELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
G + Y A K G+ S L+Q+ ++ VNC+ PG++ + M
Sbjct: 166 -----------GNPGQTNYCAAKAGLIGFS----KALAQEIASRNITVNCIAPGFIKSAM 210
Query: 217 S 217
+
Sbjct: 211 T 211
>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp
pdb|1AE1|B Chain B, Tropinone Reductase-I Complex With Nadp
Length = 273
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 13/137 (9%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
VTG +KGIGY IV+ L +Y +R+ E LE ++ + + S+ L E
Sbjct: 26 VTGGSKGIGYAIVEEL-AGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTE 84
Query: 61 AEH----------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
+ G +++LVNNA + + + M TN+ A + I +PL
Sbjct: 85 RDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPL 144
Query: 111 LRS--HGRVVNVSSSCG 125
L++ +G V+ +SS G
Sbjct: 145 LKASQNGNVIFLSSIAG 161
>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|B Chain B, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|C Chain C, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|D Chain D, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
Length = 254
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 68/188 (36%), Gaps = 54/188 (28%)
Query: 40 KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA----FKVNSSEPFGSQALHTMRT 95
+ Q LD+ + + + + E G VD LVNNA I+ + S E F +
Sbjct: 54 RYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERF----RKVVEI 109
Query: 96 NYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM 153
N + + P ++ G +VN+SS+ G + +
Sbjct: 110 NLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT--------------------- 148
Query: 154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVN 213
S+Y A+K GV LS L L D IR VN VHPG
Sbjct: 149 -------------------SSYGASKWGVRGLSKLAAVELGTDRIR----VNSVHPGMTY 185
Query: 214 TDMSSGKG 221
T M++ G
Sbjct: 186 TPMTAETG 193
>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|B Chain B, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|C Chain C, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|D Chain D, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
Length = 253
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 68/188 (36%), Gaps = 54/188 (28%)
Query: 40 KLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIA----FKVNSSEPFGSQALHTMRT 95
+ Q LD+ + + + + E G VD LVNNA I+ + S E F +
Sbjct: 54 RYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERF----RKVVEI 109
Query: 96 NYFALIDVCDILFPLLR--SHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALM 153
N + + P ++ G +VN+SS+ G + +
Sbjct: 110 NLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT--------------------- 148
Query: 154 NEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVN 213
S+Y A+K GV LS L L D IR VN VHPG
Sbjct: 149 -------------------SSYGASKWGVRGLSKLAAVELGTDRIR----VNSVHPGMTY 185
Query: 214 TDMSSGKG 221
T M++ G
Sbjct: 186 TPMTAETG 193
>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|A Chain A, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|B Chain B, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|C Chain C, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
Length = 255
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 59/231 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
VTG+ +G+G+ +GL +I R A+ E+++ L + D+ D+ +
Sbjct: 14 VTGSARGLGFAYAEGLAAAGARVILNDIR-ATLLAESVDTLTRKGYDAHGVAFDVTDELA 72
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDV-CDILFPL 110
I+A L+AE VD+L+NNA I ++ +P L N+ +ID F +
Sbjct: 73 IEAAFSKLDAEGIHVDILINNAGIQYR----KPMVELELE----NWQKVIDTNLTSAFLV 124
Query: 111 LRSHGRVVNVSSSCGHLCHV---TSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
RS + + +S G + ++ TS+A + +
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAARPTV---------------------------- 156
Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
+ Y A K G+ L+ A +Q I+ N + PGY+ TDM++
Sbjct: 157 -----APYTAAKGGIKMLTCSMAAEWAQFNIQ----TNAIGPGYILTDMNT 198
>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|B Chain B, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|C Chain C, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|D Chain D, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 269
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 71/190 (37%), Gaps = 50/190 (26%)
Query: 29 RDASRGQEALEKLQKLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQ 88
RDA R +A +D+ D S + + + A+ G VDVL+NNA I +
Sbjct: 71 RDAGRDFKAY----AVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGD 126
Query: 89 ALHTMRTNYFALIDVCDILFPLL--RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSV 146
MRT+ A+ +V + R GR+VN+ S G
Sbjct: 127 WDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNG--------------------- 165
Query: 147 EELSALMNEFVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNC 206
++G + + YA+ K G+ + L+ + + + VN
Sbjct: 166 -------------------SRGAFGQANYASAKAGIHGFT----KTLALETAKRGITVNT 202
Query: 207 VHPGYVNTDM 216
V PGY+ T M
Sbjct: 203 VSPGYLATAM 212
>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
pdb|2B4Q|B Chain B, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
Length = 276
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSI 52
VTG ++GIG I +GL++ +++ ARDA + +L D+ +
Sbjct: 34 VTGGSRGIGQMIAQGLLEA-GARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGA 92
Query: 53 KALHDHLEAEHGGVDVLVNNAAIAFKVN-SSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
+ L L +D+LVNNA ++ S P S M+ N ++ L PLL
Sbjct: 93 RRLAQALGELSARLDILVNNAGTSWGAALESYPV-SGWEKVMQLNVTSVFSCIQQLLPLL 151
Query: 112 R------SHGRVVNVSSSCG 125
R + RV+N+ S G
Sbjct: 152 RRSASAENPARVINIGSVAG 171
>pdb|3TFO|A Chain A, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|B Chain B, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|C Chain C, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|D Chain D, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
Length = 264
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 86/242 (35%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGI----IYLTARDASRGQEALEKL---------QKLDIL 47
+TGA+ GIG GI + L G+ I L AR +R + ++ Q LD+
Sbjct: 9 ITGASGGIGEGIAREL-----GVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVT 63
Query: 48 DKNSIKALHDHLEAEHGGVDVLVNNAAI-------AFKVNSSEPFGSQALHTMRTNYFAL 100
D++S+ A G +DVLVNNA + A KV+ E + N +
Sbjct: 64 DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWE-------RMIDVNIKGV 116
Query: 101 IDVCDILFPLLRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVE 158
+ + P++ + G+++N+ S G L V + A+
Sbjct: 117 LWGIGAVLPIMEAQRSGQIINI-GSIGALSVVPTAAV----------------------- 152
Query: 159 LAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIRED---LVVNCVHPGYVNTD 215
Y ATK V +S D +R++ + V CV+PG V ++
Sbjct: 153 ----------------YCATKFAVRAIS---------DGLRQESTNIRVTCVNPGVVESE 187
Query: 216 MS 217
++
Sbjct: 188 LA 189
>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain
Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein]
Reductase From Mycobacterium Paratuberculosis Atcc
Baa-968 K-10
pdb|3QIV|B Chain B, Crystal Structure Of A Putative Short-Chain
Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein]
Reductase From Mycobacterium Paratuberculosis Atcc
Baa-968 K-10
Length = 253
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-------------LDIL 47
VTG+ GIG + L ++ ++ A EA E + K +D+
Sbjct: 14 VTGSGGGIGQAYAEALAREGAAVVV-----ADINAEAAEAVAKQIVADGGTAISVAVDVS 68
Query: 48 DKNSIKALHDHLEAEHGGVDVLVNNAAI 75
D S KA+ D AE GG+D LVNNAAI
Sbjct: 69 DPESAKAMADRTLAEFGGIDYLVNNAAI 96
>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 264
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 45 DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMR-----TNYFA 99
DI D + L D +G VDV++NN AF+V S +PF + MR T + A
Sbjct: 68 DITDDAQVAHLVDETMKAYGRVDVVINN---AFRVPSMKPFANTTFEHMRDAIELTVFGA 124
Query: 100 LIDVCDILFPLLRSHGRVVNVSS 122
L + L S G VVNV+S
Sbjct: 125 LRLIQGFTPALEESKGAVVNVNS 147
>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|B Chain B, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|C Chain C, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|D Chain D, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
Length = 247
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 84/230 (36%), Gaps = 60/230 (26%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKN 50
VTGA++GIG+ + L + ++ AS E E K L+I D
Sbjct: 10 VTGASRGIGFEVAHALASKGATVVGTATSQAS--AEKFENSXKEKGFKARGLVLNISDIE 67
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
SI+ ++AE+ +D+LVNNA I SE ++T ++ F C +
Sbjct: 68 SIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSEDEWQSVINTNLSSIFRXSKEC-VR 126
Query: 108 FPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
+ GR++++ S G +
Sbjct: 127 GXXKKRWGRIISIGSVVG----------------------------------------SA 146
Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
G + Y A K GV S L+ + ++ VN V PG++ TD +
Sbjct: 147 GNPGQTNYCAAKAGVIGFS----KSLAYEVASRNITVNVVAPGFIATDXT 192
>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE2|B Chain B, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE1|A Chain A, Tropinone Reductase-Ii
Length = 260
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
VTG ++GIGYGIV+ L +Y +R+ + L + + + S+ L E
Sbjct: 14 VTGGSRGIGYGIVEEL-ASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSE 72
Query: 61 AE----------HGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
+ HG +++LVNNA I + + M N+ A + + P
Sbjct: 73 RQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPF 132
Query: 111 LRS--HGRVVNVSSSCGHL 127
L++ G VV +SS G L
Sbjct: 133 LKASERGNVVFISSVSGAL 151
>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPE|B Chain B, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPF|A Chain A, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
pdb|1IPF|B Chain B, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
Length = 259
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
VTG ++GIGYGIV+ L +Y +R+ + L + + + S+ L E
Sbjct: 13 VTGGSRGIGYGIVEEL-ASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSE 71
Query: 61 AE----------HGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
+ HG +++LVNNA I + + M N+ A + + P
Sbjct: 72 RQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPF 131
Query: 111 LRS--HGRVVNVSSSCGHL 127
L++ G VV +SS G L
Sbjct: 132 LKASERGNVVFISSVSGAL 150
>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|B Chain B, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|C Chain C, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|D Chain D, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
Length = 279
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 1 VTGANKGIGYGIVKGLIQQ----------FDGIIYLTARDASRGQEALEKLQKLDILDKN 50
VTGA+ GIG + + L+QQ I L A S G + D+ ++
Sbjct: 37 VTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEE 96
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIA 76
I ++ + ++H GVD+ +NNA +A
Sbjct: 97 DILSMFSAIRSQHSGVDICINNAGLA 122
>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l
pdb|2NTN|B Chain B, Crystal Structure Of Maba-c60v/g139a/s144l
Length = 267
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 55/222 (24%)
Query: 1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARD--ASRGQEALEKLQKLDILDKNSIKALHD 57
VTG N+GIG I + L DG + +T R A +G +E +D+ D +++
Sbjct: 40 VTGGNRGIGLAIAQRLAA--DGHKVAVTHRGSGAPKGLFGVE----VDVTDSDAVDRAFT 93
Query: 58 HLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRV 117
+E G V+VLV+NA + S++ F L M F +V
Sbjct: 94 AVEEHQGPVEVLVSNAGL-----SADAF----LMRMTEEKFE----------------KV 128
Query: 118 VNVS-SSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSA-Y 175
+N + + + S ++++ + + +S L G N A Y
Sbjct: 129 INANLTGAFRVAQRASRSMQRNKFGRMIFIASVSGLW---------------GIGNQANY 173
Query: 176 AATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
AA+K GV ++ ++++ + ++ N V PGY++TDM+
Sbjct: 174 AASKAGVIGMA----RSIARELSKANVTANVVAPGYIDTDMT 211
>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZM|B Chain B, Maba From Mycobacterium Tuberculosis
pdb|1UZN|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZN|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 55/222 (24%)
Query: 1 VTGANKGIGYGIVKGLIQQFDG-IIYLTARD--ASRGQEALEKLQKLDILDKNSIKALHD 57
VTG N+GIG I + L DG + +T R A +G +E +D+ D +++
Sbjct: 20 VTGGNRGIGLAIAQRLAA--DGHKVAVTHRGSGAPKGLFGVE----VDVTDSDAVDRAFT 73
Query: 58 HLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRV 117
+E G V+VLV+NA + S++ F L M F +V
Sbjct: 74 AVEEHQGPVEVLVSNAGL-----SADAF----LMRMTEEKFE----------------KV 108
Query: 118 VNVS-SSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSA-Y 175
+N + + + S ++++ + + +S L G N A Y
Sbjct: 109 INANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW---------------GIGNQANY 153
Query: 176 AATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
AA+K GV ++ ++++ + ++ N V PGY++TDM+
Sbjct: 154 AASKAGVIGMA----RSIARELSKANVTANVVAPGYIDTDMT 191
>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2PNF|B Chain B, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2P68|A Chain A, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
pdb|2P68|B Chain B, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
Length = 248
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 92/231 (39%), Gaps = 59/231 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKN 50
VTG+ +GIG I + L +I +T R + E++ ++++L +
Sbjct: 12 VTGSTRGIGRAIAEKLASAGSTVI-ITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEE 70
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIA---FKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
SI + + G+D+LVNNA I + S + L T F L+ +
Sbjct: 71 SINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTF-LVTQNSLR 129
Query: 108 FPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
+ + GR+VN+SS G +V
Sbjct: 130 KMIKQRWGRIVNISSVVGFTGNV------------------------------------- 152
Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
G N Y+ TK G+ + F + L+++ +++VN V PG++ TDM++
Sbjct: 153 -GQVN--YSTTKAGL--IGFTKS--LAKELAPRNVLVNAVAPGFIETDMTA 196
>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AG3|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
Length = 269
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 66/233 (28%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
VTGA++GIG I L + ++ TA AS ++ E L+ LD+ S
Sbjct: 32 VTGASRGIGQAIALEL-GRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDES 90
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIA-----FKVNSSEPFGSQALHTMRTNYFALIDVCD- 105
+ A +H++ G ++VNNA I ++ E F + TN +L +
Sbjct: 91 VAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWF-----DVVNTNLNSLYRLSKA 145
Query: 106 ILFPLLRSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
+L + ++ GR++N+ S G + +
Sbjct: 146 VLRGMTKARWGRIINIGSVVGAMGNA---------------------------------- 171
Query: 165 HTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
G N YAA K G L AL + R + VN V PG+++TDM+
Sbjct: 172 ----GQTN--YAAAKAG---LEGFTRALAREVGSRA-ITVNAVAPGFIDTDMT 214
>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|B Chain B, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|C Chain C, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|D Chain D, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
Length = 247
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 43 KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALID 102
+LD+ D+ + A GG+D+LVNNA I + + + TN L+
Sbjct: 62 ELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMY 121
Query: 103 VCDILFP-LLRSHGRVVNVSSSCGHL 127
+ P LLRS G VV +SS G +
Sbjct: 122 MTRAALPHLLRSKGTVVQMSSIAGRV 147
>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|B Chain B, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|C Chain C, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|D Chain D, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
Length = 271
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 85/230 (36%), Gaps = 60/230 (26%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
VTG+++G+G + +GL I + D SR + +++ + + D+ ++
Sbjct: 31 VTGSSRGLGRAMAEGLAVA-GARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESE 89
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALI----DVCDIL 107
I L+ + VD+LVNNA I F+ E + + TN + + +
Sbjct: 90 IIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRM 149
Query: 108 FPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTK 167
P R +G++VN+ S L T
Sbjct: 150 IP--RGYGKIVNIGSLTSELARATV----------------------------------- 172
Query: 168 GGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
+ Y K G+ L+ A +Q I+ N + PGY+ TDM+
Sbjct: 173 -----APYTVAKGGIKMLTRAMAAEWAQYGIQ----ANAIGPGYMLTDMN 213
>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
pdb|3SJ7|B Chain B, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
Length = 252
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
VTGA++GIG I L ++ + A + + +E+++ + ++ D +
Sbjct: 15 VTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADE 74
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL-HTMRTNYFALIDVCDILFP- 109
+KA+ + ++ G +DVLVNNA I + N Q + TN + + P
Sbjct: 75 VKAMIKEVVSQFGSLDVLVNNAGIT-RDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQ 133
Query: 110 LLRSH-GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
+LR G ++N+SS G +
Sbjct: 134 MLRQRSGAIINLSSVVGAV----------------------------------------- 152
Query: 169 GWPNSA-YAATKLGVTKLSFLQHALLSQDAIRE----DLVVNCVHPGYVNTDMS 217
G P A Y ATK GV L++ A RE + VN V PG++ +DM+
Sbjct: 153 GNPGQANYVATKAGVIG--------LTKSAARELASRGITVNAVAPGFIVSDMT 198
>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|N Chain N, Architecture Of Mammalian Fatty Acid Synthase
Length = 226
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 85/221 (38%), Gaps = 60/221 (27%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-------KLQKLDILDKNSIK 53
VTGA++GIG I + L + G + + G +A+ K L++ D SI+
Sbjct: 10 VTGASRGIGRAIAETLAAR--GAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIE 67
Query: 54 ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRS 113
++ + + AE G VD+LVNNA I L M+ + DI+ L
Sbjct: 68 SVLEKIRAEFGEVDILVNNAGITR---------DNLLMRMKDEEW-----NDIIETNL-- 111
Query: 114 HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNS 173
SS L A+ KK I ++ GG N
Sbjct: 112 --------SSVFRLSKAVMRAMMKKRHGRIITI---------------------GGQAN- 141
Query: 174 AYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
YAA K G+ S L+++ + VN V PG++ T
Sbjct: 142 -YAAAKAGLIGFS----KSLAREVASRGITVNVVAPGFIET 177
>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
pdb|4HP8|B Chain B, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
Length = 247
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 64/227 (28%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKA------ 54
VTGAN G+G I GL ++ AR A + LDI+ K+ A
Sbjct: 14 VTGANTGLGQAIAVGLAAAGAEVV-CAARRAPD--------ETLDIIAKDGGNASALLID 64
Query: 55 LHDHLEAE----HGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
D L A+ G D+LVNNA I + +S E F+ +D +++
Sbjct: 65 FADPLAAKDSFTDAGFDILVNNAGIIRRADSVE--------------FSELDWDEVMDVN 110
Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKS--VEELSALMNEFVELAQDGSHTKG 168
L++ T++A K+LL + +S V +++L++ +G
Sbjct: 111 LKA--------------LFFTTQAFAKELLAKGRSGKVVNIASLLS-----------FQG 145
Query: 169 GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD 215
G +Y A K GV L+ LL+ + + + VN + PGY+ T+
Sbjct: 146 GIRVPSYTAAKHGVAGLT----KLLANEWAAKGINVNAIAPGYIETN 188
>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|B Chain B, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|C Chain C, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|D Chain D, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3RWB|A Chain A, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|B Chain B, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|C Chain C, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|D Chain D, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
Length = 247
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIY-------LTARDASRGQEALEKLQKLDILDKNSIK 53
VTGA +GIG I L +I A AS G++A + DI D S+K
Sbjct: 11 VTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKA--RAIAADISDPGSVK 68
Query: 54 ALHDHLEAEHGGVDVLVNNAAI 75
AL ++A GG+D+LVNNA+I
Sbjct: 69 ALFAEIQALTGGIDILVNNASI 90
>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
Length = 281
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 43 KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALID 102
K+D+ D+ ++++ E GG+D+ + NA I+ E +Q + TN +
Sbjct: 77 KVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFN 136
Query: 103 VCDILFP--LLRSHGRVVNVSSSCGH 126
+ P + R++GR+V VSS GH
Sbjct: 137 TIAAVAPGMIKRNYGRIVTVSSMLGH 162
>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NDR|B Chain B, Crystal Structure Of Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NDR|C Chain C, Crystal Structure Of Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NDR|D Chain D, Crystal Structure Of Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
Length = 247
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIY-------LTARDASRGQEALEKLQKLDILDKNSIK 53
VTGA +GIG I L +I A AS G++A + DI D S+K
Sbjct: 11 VTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKA--RAIAADISDPGSVK 68
Query: 54 ALHDHLEAEHGGVDVLVNNAAI 75
AL ++A GG+D+LVNNA+I
Sbjct: 69 ALFAEIQALTGGIDILVNNASI 90
>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZL|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 53/221 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
VTG N+GIG I + L DG S + L ++ D+ D +++ +E
Sbjct: 20 VTGGNRGIGLAIAQRLAA--DGHKVAVTHRGSGAPKGLFGVE-CDVTDSDAVDRAFTAVE 76
Query: 61 AEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVNV 120
G V+VLV+NA + S++ F L M F +V+N
Sbjct: 77 EHQGPVEVLVSNAGL-----SADAF----LMRMTEEKFE----------------KVINA 111
Query: 121 S-SSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW--PNSA-YA 176
+ + + S ++++ N+F + GS G W N A YA
Sbjct: 112 NLTGAFRVAQRASRSMQR----------------NKFGRMIFIGS-VSGSWGIGNQANYA 154
Query: 177 ATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
A+K GV ++ ++++ + ++ N V PGY++TDM+
Sbjct: 155 ASKAGVIGMA----RSIARELSKANVTANVVAPGYIDTDMT 191
>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM
SINORHIZOBIUM Meliloti 1021
Length = 271
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 84/232 (36%), Gaps = 56/232 (24%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
VTG ++GIG I K L + + A R Q + +++ + D D +
Sbjct: 36 VTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEA 95
Query: 52 I-KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
I +A+ + +EA GG+D+LVN+A I E + N+ A
Sbjct: 96 IEQAIRETVEA-LGGLDILVNSAGIWHSAPLEETTVADFDEVXAVNFRAPFVAIRSASRH 154
Query: 111 LRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGW 170
L GR++ + S+ L W
Sbjct: 155 LGDGGRIITIGSNLAELVP----------------------------------------W 174
Query: 171 PN-SAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG 221
P S Y+A+K + L+ L++D + VN VHPG +TD + G
Sbjct: 175 PGISLYSASKAALAGLT----KGLARDLGPRGITVNIVHPGSTDTDXNPADG 222
>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2
From Pseudomonas Aeruginosa Pao1 Containing An Atypical
Catalytic Center
pdb|3LF1|B Chain B, Apo Structure Of The Short Chain Oxidoreductase Q9hya2
From Pseudomonas Aeruginosa Pao1 Containing An Atypical
Catalytic Center
pdb|3LF2|A Chain A, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|B Chain B, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|C Chain C, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|D Chain D, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
Length = 265
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK-----------LDILDK 49
VTG + GIG V+ L++ + + ARD R + A L++ D+LD
Sbjct: 13 VTGGSSGIGLATVELLLEAGAAVAF-CARDGERLRAAESALRQRFPGARLFASVCDVLDA 71
Query: 50 NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP 109
++A + E G +LVNNA +E ++ +F++I P
Sbjct: 72 LQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLP 131
Query: 110 LLRSHG 115
L S
Sbjct: 132 QLESRA 137
>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|B Chain B, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|C Chain C, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|D Chain D, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|E Chain E, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|F Chain F, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|G Chain G, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|H Chain H, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|I Chain I, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|J Chain J, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
Length = 281
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 60/141 (42%), Gaps = 19/141 (13%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKN 50
VTGA+ G G I + + D +I +R EAL+ L LD+ D
Sbjct: 10 VTGASSGFGRAIAEAAVAAGDTVI-----GTARRTEALDDLVAAYPDRAEAISLDVTDGE 64
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTM-RTNYFALIDVCDILFP 109
I + + A +G VDVLVNNA +V + E + L + + F + L P
Sbjct: 65 RIDVVAADVLARYGRVDVLVNNAGRT-QVGAFEETTERELRDLFELHVFGPARLTRALLP 123
Query: 110 LLRSH--GRVVNVSSSCGHLC 128
R G VVN+SS G L
Sbjct: 124 QXRERGSGSVVNISSFGGQLS 144
>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|B Chain B, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|C Chain C, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|D Chain D, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
Length = 446
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 54/227 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSI 52
VTGA +GIG I + + DG ++ A D E L + LD+ +++
Sbjct: 210 VTGAARGIGATIAE--VFARDGA-HVVAIDVESAAENLAETASKVGGTALWLDVTADDAV 266
Query: 53 KALHDHLEAEHGG-VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
+ +HL HGG D+LVNNA I + L M + + ++L PL
Sbjct: 267 DKISEHLRDHHGGKADILVNNAGITR---------DKLLANMDDARWDAVLAVNLLAPLR 317
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
+ G V N S + E V LS++ +A + T
Sbjct: 318 LTEGLVGNGS------------------IGEGGRVIGLSSIAG----IAGNRGQTN---- 351
Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
YA TK G+ ++ L+ + + +N V PG++ T M++
Sbjct: 352 ---YATTKAGMIGIT----QALAPGLAAKGITINAVAPGFIETQMTA 391
>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme
pdb|1PR9|B Chain B, Human L-Xylulose Reductase Holoenzyme
pdb|1WNT|A Chain A, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|B Chain B, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|C Chain C, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|D Chain D, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
Length = 244
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 61/138 (44%), Gaps = 21/138 (15%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
VTGA KGIG G V+ L ++ + SR Q L+ L + + L D
Sbjct: 12 VTGAGKGIGRGTVQALHATGARVVAV-----SRTQADLDSLVRECPGIEPVCVDLGDWEA 66
Query: 61 AEH-----GGVDVLVNNAAIAFKVNSSEPF---GSQAL-HTMRTNYFALIDVCDILFPLL 111
E G VD+LVNNAA+A +PF +A + N A+I V I+ L
Sbjct: 67 TERALGSVGPVDLLVNNAAVALL----QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGL 122
Query: 112 RSH---GRVVNVSSSCGH 126
+ G +VNVSS C
Sbjct: 123 IARGVPGAIVNVSSQCSQ 140
>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|B Chain B, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|C Chain C, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|D Chain D, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|E Chain E, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|F Chain F, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|G Chain G, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|H Chain H, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
Length = 256
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 23/144 (15%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSI 52
VTGA +GIG I L++ + DA+ A E Q K+D+ D++ +
Sbjct: 7 VTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQV 66
Query: 53 KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLR 112
A + GG DV+VNNA +A S P S + Y I+V +++ +
Sbjct: 67 FAAVEQARKTLGGFDVIVNNAGVA----PSTPIESITPEIVDKVYN--INVKGVIWGIQA 120
Query: 113 S---------HGRVVNVSSSCGHL 127
+ G+++N S GH+
Sbjct: 121 AVEAFKKEGHGGKIINACSQAGHV 144
>pdb|3D3W|B Chain B, Structure Of L-Xylulose Reductase With Bound Coenzyme,
Phosphate And Hydroxide
Length = 245
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 61/136 (44%), Gaps = 21/136 (15%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
VTGA KGIG G V+ L ++ + SR Q L+ L + + L D
Sbjct: 12 VTGAGKGIGRGTVQALHATGARVVAV-----SRTQADLDSLVRECPGIEPVCVDLGDWEA 66
Query: 61 AEH-----GGVDVLVNNAAIAFKVNSSEPF---GSQAL-HTMRTNYFALIDVCDILFPLL 111
E G VD+LVNNAA+A +PF +A + N A+I V I+ L
Sbjct: 67 TERALGSVGPVDLLVNNAAVALL----QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGL 122
Query: 112 RSH---GRVVNVSSSC 124
+ G +VNVSS C
Sbjct: 123 IARGVPGAIVNVSSQC 138
>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|B Chain B, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|C Chain C, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|D Chain D, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
Length = 247
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 43 KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALID 102
+LD+ D+ + A GG+D+LVNNA I + + + TN L
Sbjct: 62 ELDVADRQGVDAAVASTVEALGGLDILVNNAGIXLLGPVEDADTTDWTRXIDTNLLGLXY 121
Query: 103 VCDILFP-LLRSHGRVVNVSSSCGHL 127
P LLRS G VV SS G +
Sbjct: 122 XTRAALPHLLRSKGTVVQXSSIAGRV 147
>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GED|B Chain B, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GEG|A Chain A, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
pdb|3GEG|B Chain B, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
Length = 247
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 52/220 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL----DILDKNSIKALH 56
VTG GIG I ++ D + ++ + A E+ D+ D ++K
Sbjct: 7 VTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFV 66
Query: 57 DHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILF-PLLRSHG 115
++ + +DVLVNNA K S + + + A ++ + L+++ G
Sbjct: 67 EYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKG 126
Query: 116 RVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNS-A 174
R++N++S+ A +E P+S A
Sbjct: 127 RIINIAST--------------------------RAFQSE---------------PDSEA 145
Query: 175 YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
YA+ K G+ L+ HAL ++ D++VNC+ PG++N
Sbjct: 146 YASAKGGIVALT---HALAM--SLGPDVLVNCIAPGWINV 180
>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
pdb|3M1L|B Chain B, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
Length = 432
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 54/227 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSI 52
VTGA +GIG I + + DG ++ A D E L + LD+ +++
Sbjct: 202 VTGAARGIGATIAE--VFARDGA-HVVAIDVESAAENLAETASKVGGTALWLDVTADDAV 258
Query: 53 KALHDHLEAEHGG-VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
+ +HL HGG D+LVNNA I + L M + + ++L PL
Sbjct: 259 DKISEHLRDHHGGKADILVNNAGITR---------DKLLANMDDARWDAVLAVNLLAPLR 309
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
+ G V N S + E V LS++ +A + T
Sbjct: 310 LTEGLVGNGS------------------IGEGGRVIGLSSIAG----IAGNRGQTN---- 343
Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
YA TK G+ ++ L+ + + +N V PG++ T M++
Sbjct: 344 ---YATTKAGMIGIT----QALAPGLAAKGITINAVAPGFIETQMTA 383
>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
pdb|3LLS|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
Length = 475
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 54/227 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSI 52
VTGA +GIG I + + DG ++ A D E L + LD+ +++
Sbjct: 239 VTGAARGIGATIAE--VFARDGA-HVVAIDVESAAENLAETASKVGGTALWLDVTADDAV 295
Query: 53 KALHDHLEAEHGG-VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
+ +HL HGG D+LVNNA I + L M + + ++L PL
Sbjct: 296 DKISEHLRDHHGGKADILVNNAGITR---------DKLLANMDDARWDAVLAVNLLAPLR 346
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
+ G V N S + E V LS++ +A + T
Sbjct: 347 LTEGLVGNGS------------------IGEGGRVIGLSSIAG----IAGNRGQTN---- 380
Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
YA TK G+ ++ L+ + + +N V PG++ T M++
Sbjct: 381 ---YATTKAGMIGIT----QALAPGLAAKGITINAVAPGFIETQMTA 420
>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|B Chain B, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|C Chain C, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|D Chain D, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
Length = 454
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 54/227 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSI 52
VTGA +GIG I + + DG ++ A D E L + LD+ +++
Sbjct: 218 VTGAARGIGATIAE--VFARDGA-HVVAIDVESAAENLAETASKVGGTALWLDVTADDAV 274
Query: 53 KALHDHLEAEHGG-VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
+ +HL HGG D+LVNNA I + L M + + ++L PL
Sbjct: 275 DKISEHLRDHHGGKADILVNNAGITR---------DKLLANMDDARWDAVLAVNLLAPLR 325
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
+ G V N S + E V LS++ +A + T
Sbjct: 326 LTEGLVGNGS------------------IGEGGRVIGLSSIAG----IAGNRGQTN---- 359
Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
YA TK G+ ++ L+ + + +N V PG++ T M++
Sbjct: 360 ---YATTKAGMIGIT----QALAPGLAAKGITINAVAPGFIETQMTA 399
>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1T|D Chain D, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1U|A Chain A, Crystal Structure Of A Beta-Ketoacyl Reductase Fabg4 From
Mycobacterium Tuberculosis H37rv Complexed With Nad+ And
Hexanoyl-Coa At 2.5 Angstrom Resolution
Length = 462
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 54/227 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK--------LDILDKNSI 52
VTGA +GIG I + + DG ++ A D E L + LD+ +++
Sbjct: 226 VTGAARGIGATIAE--VFARDGA-HVVAIDVESAAENLAETASKVGGTALWLDVTADDAV 282
Query: 53 KALHDHLEAEHGG-VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
+ +HL HGG D+LVNNA I + L M + + ++L PL
Sbjct: 283 DKISEHLRDHHGGKADILVNNAGITR---------DKLLANMDDARWDAVLAVNLLAPLR 333
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
+ G V N S + E V LS++ +A + T
Sbjct: 334 LTEGLVGNGS------------------IGEGGRVIGLSSIAG----IAGNRGQTN---- 367
Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
YA TK G+ ++ L+ + + +N V PG++ T M++
Sbjct: 368 ---YATTKAGMIGIT----QALAPGLAAKGITINAVAPGFIETQMTA 407
>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|B Chain B, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|C Chain C, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|D Chain D, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
Length = 272
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 13/144 (9%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSI 52
+TGA G G + + ++ LT R R Q +L LD+ D+ +
Sbjct: 26 ITGATSGFGEACARRFAEAGWSLV-LTGRREERLQALAGELSAKTRVLPLTLDVRDRAAX 84
Query: 53 KALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILFPLL 111
A D+L E + L+NNA +A + ++ T + TN L+ +L P L
Sbjct: 85 SAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLLLPRL 144
Query: 112 RSHG---RVVNVSSSCGHLCHVTS 132
+HG +VN+ S G + S
Sbjct: 145 IAHGAGASIVNLGSVAGKWPYPGS 168
>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|D Chain D, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|A Chain A, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|B Chain B, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|E Chain E, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|F Chain F, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|G Chain G, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|H Chain H, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
Length = 258
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 14/88 (15%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL-------QK-----LDILD 48
VTG +GIG GI + L DG A + ++A E + QK LD+ D
Sbjct: 7 VTGGAQGIGRGISEKLAA--DGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD 64
Query: 49 KNSIKALHDHLEAEHGGVDVLVNNAAIA 76
K + + D + GG DVLVNNA IA
Sbjct: 65 KANFDSAIDEAAEKLGGFDVLVNNAGIA 92
>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
Length = 280
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 26/143 (18%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDK--NSIKA---- 54
+TG++ GIG L Q + +T R + R +E + + K + +K NS+ A
Sbjct: 11 ITGSSNGIGRTTAI-LFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT 69
Query: 55 ------LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL--------HTMRTNYFAL 100
+ + + G +DVLVNNA A + FG+ T++ N A+
Sbjct: 70 EDGQDQIINSTLKQFGKIDVLVNNAGAAIP----DAFGTTGTDQGIDIYHKTLKLNLQAV 125
Query: 101 IDVCDILFP-LLRSHGRVVNVSS 122
I++ + P L+ S G +VNVSS
Sbjct: 126 IEMTKKVKPHLVASKGEIVNVSS 148
>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium
Smegmatis
Length = 454
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 89/226 (39%), Gaps = 54/226 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------KLDILDKNSI 52
VTGA +GIG I + + DG + A D E L+++ LD+ +++
Sbjct: 218 VTGAARGIGATIAE--VFARDGAT-VVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAV 274
Query: 53 KALHDHLEAEHGG-VDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
+ H+ HGG VD+LVNNA I + L M + + ++L P
Sbjct: 275 DKITAHVTEHHGGKVDILVNNAGITR---------DKLLANMDEKRWDAVIAVNLLAPQR 325
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
+ G V N + + E V LS++ +A + T
Sbjct: 326 LTEGLVGNGT------------------IGEGGRVIGLSSMAG----IAGNRGQTN---- 359
Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
YA TK G+ L+ +L+ I +N V PG++ T M+
Sbjct: 360 ---YATTKAGMIGLAEALAPVLADKGI----TINAVAPGFIETKMT 398
>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
pdb|3ICC|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
Length = 255
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 94/239 (39%), Gaps = 71/239 (29%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL------------DILD 48
VTGA++GIG I K L DG + + +R +EA E + ++ ++
Sbjct: 12 VTGASRGIGRAIAKRLAN--DGAL-VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES 68
Query: 49 KNSIKALHDHLEAE------HGGVDVLVNNAAI---AFKVNSSEPFGSQALHTMRTNYFA 99
+ ++AL+ L+ E D+L+NNA I AF ++E F + + F
Sbjct: 69 LHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRXVSVNAKAPFF 128
Query: 100 LIDVCDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVEL 159
+I LR + R++N+SS+ + + +F+
Sbjct: 129 IIQQA---LSRLRDNSRIINISSAATRIS------------------------LPDFI-- 159
Query: 160 AQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
AY+ TK + +F L++ + VN + PG+V TD ++
Sbjct: 160 --------------AYSXTKGAINTXTF----TLAKQLGARGITVNAILPGFVKTDXNA 200
>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
pdb|1YB1|B Chain B, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
Length = 272
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 44 LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDV 103
+D ++ I + ++AE G V +LVNNA + + + Q T N A
Sbjct: 87 VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWT 146
Query: 104 CDILFPLL--RSHGRVVNVSSSCGHL 127
P + +HG +V V+S+ GH+
Sbjct: 147 TKAFLPAMTKNNHGHIVTVASAAGHV 172
>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|B Chain B, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|C Chain C, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|D Chain D, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
Length = 277
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 175 YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSG 219
Y A+K VT L+ A L + +IR VN VHPG VNT M SG
Sbjct: 174 YTASKHAVTGLARAFAAELGKHSIR----VNSVHPGPVNTPMGSG 214
>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
pdb|3OSU|B Chain B, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
Length = 246
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 87/233 (37%), Gaps = 65/233 (27%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
VTGA++GIG I L ++ + A + + +E+++ + ++ D +
Sbjct: 9 VTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADE 68
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP-- 109
+KA + ++ G +DVLVNNA I + + TN + + P
Sbjct: 69 VKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQKATPQX 128
Query: 110 LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGG 169
L + G ++N+SS G + G
Sbjct: 129 LRQRSGAIINLSSVVGAV-----------------------------------------G 147
Query: 170 WPNSA-YAATKLGVTKLSFLQHALLSQDAIRE----DLVVNCVHPGYVNTDMS 217
P A Y ATK GV L++ A RE + VN V PG++ +D +
Sbjct: 148 NPGQANYVATKAGVIG--------LTKSAARELASRGITVNAVAPGFIVSDXT 192
>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|B Chain B, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|C Chain C, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|D Chain D, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
Length = 250
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 93/246 (37%), Gaps = 64/246 (26%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------------KL 44
+TGA++GIG I GL ++ + +R ++ LEK+ L
Sbjct: 12 ITGASQGIGAVIAAGLATDGYRVVLI-----ARSKQNLEKVHDEIXRSNKHVQEPIVLPL 66
Query: 45 DILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVC 104
DI D + ++G VD+LVN AA + SEP N+ + ++
Sbjct: 67 DITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPV---------DNFRKIXEI- 116
Query: 105 DILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGS 164
NV + G L VT EI V++ + N A+ G
Sbjct: 117 --------------NVIAQYGILKTVT----------EIXKVQKNGYIFNVASRAAKYGF 152
Query: 165 HTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLT 224
G Y +TK + L+ + L+ IR V + PG+VNTD + G
Sbjct: 153 ADGG-----IYGSTKFALLGLAESLYRELAPLGIR----VTTLCPGWVNTDXAKKAGTPF 203
Query: 225 IDQDNI 230
D++ I
Sbjct: 204 KDEEXI 209
>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|B Chain B, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|C Chain C, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|D Chain D, Improved Nadph-Dependent Blue Fluorescent Protein
Length = 266
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 18/136 (13%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-------KLDILDKNSIK 53
+TGA+ GIG I + ++ ++ L +R E L+ L ++D+ DK +
Sbjct: 21 ITGASSGIGEAIARRFSEEGHPLLLL-----ARRVERLKALNLPNTLCAQVDVTDKYTFD 75
Query: 54 ALHDHLEAEHGGVDVLVNNAAIAF--KVNSSEPFGSQALHTMRTNYFALID-VCDILFPL 110
E +G D +VNNA + ++++ E Q + + N L++ + +L P+
Sbjct: 76 TAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDV--NVLGLLNGMQAVLAPM 133
Query: 111 -LRSHGRVVNVSSSCG 125
R+ G ++N+SS G
Sbjct: 134 KARNCGTIINISSIAG 149
>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From
Arabidopsis Thaliana Gene At1g07440
pdb|2Q45|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Putative Tropinone Reductase From Arabidopsis Thaliana
Gene At1g07440
Length = 266
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 27/148 (18%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSI-------- 52
VTG KGIG+ IV+ F +I+ AR+ E L K QK S+
Sbjct: 19 VTGGTKGIGHAIVEEF-AGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPE 77
Query: 53 -KALHDHLEAEHGG-VDVLVNN-AAIAFKVN---SSEPFGSQALHTMRTNYFALIDVCDI 106
+ L + + GG +D+L+NN AI K ++E F + H + TN + + +
Sbjct: 78 REKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDF---SFH-ISTNLESAYHLSQL 133
Query: 107 LFPLLRSHGRVVNVSSSCGHLCHVTSEA 134
PLL++ G CG++ ++S A
Sbjct: 134 AHPLLKASG--------CGNIIFMSSIA 153
>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus
Thermophilus Hb8
pdb|2EKP|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|B Chain B, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|C Chain C, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|D Chain D, Structure Of Tt0495 Protein From Thermus Thermophilus
Length = 239
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 91/223 (40%), Gaps = 53/223 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDI---LDKNSIKALHD 57
VTG ++GIG I + L+ + Y A + +EA + L + + L+K+ K L
Sbjct: 7 VTGGSRGIGRAIAEALVARG----YRVAIASRNPEEAAQSLGAVPLPTDLEKDDPKGLVK 62
Query: 58 HLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRV 117
GG+ VLV+ AA VN +P + R + +DV +L
Sbjct: 63 RALEALGGLHVLVHAAA----VNVRKPALELSYEEWRRVLYLHLDVAFLL---------- 108
Query: 118 VNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYAA 177
++ H+ +EA ++L I SV +A G P AY
Sbjct: 109 --AQAAAPHM----AEAGWGRVLF-IGSVTTFTA---------------GGPVPIPAYTT 146
Query: 178 TK---LGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
K LG+T+ L+++ R + VN + PGYV T+ +
Sbjct: 147 AKTALLGLTR-------ALAKEWARLGIRVNLLCPGYVETEFT 182
>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein
Reductase From Brassica Napus Complexed With Nadp+
pdb|2CDH|G Chain G, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|H Chain H, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|I Chain I, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|J Chain J, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|K Chain K, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|L Chain L, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution
Length = 244
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 90/230 (39%), Gaps = 57/230 (24%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
VTGA++GIG I L + ++ AR A +E ++++ D+ +
Sbjct: 6 VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEAD 65
Query: 52 IKALHDHLEAEHGGVDVLVNNAAI---AFKVNSSEPFGSQALHTMRTNYFALIDVCDILF 108
++A+ G +DV+VNNA I + + + + T F +
Sbjct: 66 VEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIM 125
Query: 109 PLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
+ + GR++N++S G + ++
Sbjct: 126 -MKKRKGRIINIASVVGLIGNI-------------------------------------- 146
Query: 169 GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
G N YAA K GV + F + A +++ ++ VN V PG++ +DM++
Sbjct: 147 GQAN--YAAAKAGV--IGFSKTA--AREGASRNINVNVVCPGFIASDMTA 190
>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|B Chain B, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|C Chain C, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|D Chain D, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
Length = 277
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 84/221 (38%), Gaps = 47/221 (21%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-----KLQKLDILDKNSIKAL 55
VTGA GIG + + L + ++ + A + ++D+ D+ I A+
Sbjct: 34 VTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAM 93
Query: 56 HDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHG 115
D A GGVD LV NA + + +LID +
Sbjct: 94 VDACVAAFGGVDKLVANAGV-------------------VHLASLIDT------TVEDFD 128
Query: 116 RVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAY 175
RV+ ++ LC T A + + ++ LS+L + GG AY
Sbjct: 129 RVIAINLRGAWLC--TKHAAPRMIERGGGAIVNLSSLAGQV---------AVGG--TGAY 175
Query: 176 AATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
+K G+ +LS + A L IR N + P +V+T M
Sbjct: 176 GMSKAGIIQLSRITAAELRSSGIRS----NTLLPAFVDTPM 212
>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1
Length = 260
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
VTGA++GIG GI L + +Y+T R + ++ Q L D ++
Sbjct: 10 VTGASRGIGRGIALQLCKA-GATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESE 68
Query: 52 IKALHDHLEAEHGG-VDVLVNNA 73
+++L + ++ E G +DVLVNNA
Sbjct: 69 VRSLFEQVDREQQGRLDVLVNNA 91
>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase
(Saro_0793) From Novosphingobium Aromaticivorans
pdb|3IOY|B Chain B, Structure Of Putative Short-Chain Dehydrogenase
(Saro_0793) From Novosphingobium Aromaticivorans
Length = 319
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 12/86 (13%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ-----------KLDILDK 49
VTG G+G G+V+ L+ Q + R S +AL L+ +LD+ +
Sbjct: 13 VTGGANGVGIGLVRQLLNQGCKVAIADIRQDSI-DKALATLEAEGSGPEVMGVQLDVASR 71
Query: 50 NSIKALHDHLEAEHGGVDVLVNNAAI 75
K D +EA G V +L NNA +
Sbjct: 72 EGFKMAADEVEARFGPVSILCNNAGV 97
>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida
Tropicalis Peroxisomal Multifunctional Enzyme Type 2
Length = 604
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 67/136 (49%), Gaps = 16/136 (11%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSI----KALH 56
+TGA G+G K + ++ +DA++ + ++ D++ + +A+
Sbjct: 327 ITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAII 386
Query: 57 DHLEAEHGGVDVLVNNAAI----AFKVNSSEPFGS-QALHTMRTNYFALIDVCDILFPLL 111
++ ++G +D+LVNNA I +F S + + S Q +H + T ++ + +P
Sbjct: 387 KNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGT-----FNLSRLAWPYF 441
Query: 112 --RSHGRVVNVSSSCG 125
+ GR++N++S+ G
Sbjct: 442 VEKQFGRIINITSTSG 457
>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1WMB|B Chain B, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1X1T|A Chain A, Crystal Structure Of D-3-hydroxybutyrate Dehydrogenase
From Pseudomonas Fragi Complexed With Nad+
pdb|2ZTL|A Chain A, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|B Chain B, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|C Chain C, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|D Chain D, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTV|A Chain A, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|B Chain B, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|C Chain C, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|D Chain D, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
Length = 260
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 14/147 (9%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR------GQEALEKLQKL----DILDKN 50
VTG+ GIG GI L Q I+ DA+ G A ++ L D+
Sbjct: 9 VTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGE 68
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILFP 109
+++ L D+ + G +D+LVNNA I E F ++ + N A+ P
Sbjct: 69 AVRGLVDNAVRQMGRIDILVNNAGIQHTA-LIEDFPTEKWDAILALNLSAVFHGTAAALP 127
Query: 110 LLRSH--GRVVNVSSSCGHLCHVTSEA 134
++ GR++N++S+ G + A
Sbjct: 128 HMKKQGFGRIINIASAHGLVASANKSA 154
>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|B Chain B, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|C Chain C, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|D Chain D, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
Length = 260
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 14/147 (9%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR------GQEALEKLQKL----DILDKN 50
VTG+ GIG GI L Q I+ DA+ G A ++ L D+
Sbjct: 9 VTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGE 68
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILFP 109
+++ L D+ + G +D+LVNNA I E F ++ + N A+ P
Sbjct: 69 AVRGLVDNAVRQMGRIDILVNNAGIQHTA-LIEDFPTEKWDAILALNLSAVFHGTAAALP 127
Query: 110 LLRSH--GRVVNVSSSCGHLCHVTSEA 134
++ GR++N++S+ G + A
Sbjct: 128 HMKKQGFGRIINIASAHGLVASANKSA 154
>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme,
Phosphate And Hydroxide
Length = 244
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
VTGA KGIG G V+ L ++ + SR Q L+ L + + L D
Sbjct: 12 VTGAGKGIGRGTVQALHATGARVVAV-----SRTQADLDSLVRECPGIEPVCVDLGDWEA 66
Query: 61 AEH-----GGVDVLVNNAAIAFKVNSSEPF---GSQAL-HTMRTNYFALIDVCDILFPLL 111
E G VD+LVNNAA+A +PF +A + N A+I V I+ L
Sbjct: 67 TERALGSVGPVDLLVNNAAVALL----QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGL 122
Query: 112 RSH---GRVVNVSS 122
+ G +VNVSS
Sbjct: 123 IARGVPGAIVNVSS 136
>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|B Chain B, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|C Chain C, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|D Chain D, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Length = 260
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 14/147 (9%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASR------GQEALEKLQKL----DILDKN 50
VTG+ GIG GI L Q I+ DA+ G A ++ L D+
Sbjct: 9 VTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGE 68
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILFP 109
+++ L D+ + G +D+LVNNA I E F ++ + N A+ P
Sbjct: 69 AVRGLVDNAVRQMGRIDILVNNAGIQHTA-LIEDFPTEKWDAILALNLSAVFHGTAAALP 127
Query: 110 LLRSH--GRVVNVSSSCGHLCHVTSEA 134
++ GR++N++S+ G + A
Sbjct: 128 HMKKQGFGRIINIASAHGLVASANKSA 154
>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DMM|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
Length = 269
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 71/187 (37%), Gaps = 64/187 (34%)
Query: 43 KLDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALID 102
K D+ ++ ++AL + G +DVLVNNA I + L R ++ +++D
Sbjct: 84 KADVSQESEVEALFAAVIERWGRLDVLVNNAGITRD--------TLLLRMKRDDWQSVLD 135
Query: 103 -------VCD---ILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSAL 152
+C L + GR++N++S G +
Sbjct: 136 LNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM------------------------- 170
Query: 153 MNEFVELAQDGSHTKGGWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGY 211
G P A Y+A K GV L+ ++++ + VN V PG+
Sbjct: 171 ----------------GNPGQANYSAAKAGVIGLT----KTVAKELASRGITVNAVAPGF 210
Query: 212 VNTDMSS 218
+ TDM+S
Sbjct: 211 IATDMTS 217
>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of
Caenorhabditis Elegans In The Apo-Form
Length = 278
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKN--------SI 52
+TG++ GIG L + + +T R A R +E +++ + ++N +
Sbjct: 11 ITGSSNGIGRATAV-LFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT 69
Query: 53 KALHDHLEA----EHGGVDVLVNNAAIAFKVNSSEPFGSQALH----TMRTNYFALIDVC 104
A D + + + G +D+LVNNA A + S+ +Q++ T+ N ++I +
Sbjct: 70 DAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALT 129
Query: 105 DILFPLLRS-HGRVVNVSS 122
P L S G +VN+SS
Sbjct: 130 KKAVPHLSSTKGEIVNISS 148
>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Apo Form)
pdb|3OIC|D Chain D, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Apo Form)
pdb|3OID|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|B Chain B, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|C Chain C, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|D Chain D, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
Length = 258
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 13/154 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
VTG+++G+G L + I+ AR E E+++KL ++
Sbjct: 9 VTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAK 68
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
IK + ++ G +DV VNNAA E + TM N AL+ L+
Sbjct: 69 IKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLM 128
Query: 112 RSH--GRVVNVSS--SCGHLCHVTSEALKKKLLH 141
+ G +V++SS S +L + T+ + K L
Sbjct: 129 EKNGGGHIVSISSLGSIRYLENYTTVGVSKAALE 162
>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|B Chain B, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|C Chain C, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|D Chain D, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
Length = 250
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 72/174 (41%), Gaps = 39/174 (22%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYL---------TARDASRGQEALEKLQKL--DILDK 49
VTGA+ G G I + + D + L TAR + +K+ ++ D+ D+
Sbjct: 7 VTGASSGNGLAIATRFLARGDRVAALDLSAETLEETAR--THWHAYADKVLRVRADVADE 64
Query: 50 NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT---------MRTNYFAL 100
+ A + G +DVLVNNA I +SE + LHT M N +
Sbjct: 65 GDVNAAIAATMEQFGAIDVLVNNAGI---TGNSE---AGVLHTTPVEQFDKVMAVNVRGI 118
Query: 101 IDVCDILFP--LLRSHGRVVNVSSSC------GHLCHVTSEALKKKLLHEIKSV 146
C + P LL+ G +VN++S G + TS K +L KSV
Sbjct: 119 FLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTS---KGAVLQLTKSV 169
>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|B Chain B, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|C Chain C, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|D Chain D, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
Length = 259
Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
+TG+ +GIG + +++ + + D R ++A ++ + D+ ++SI A
Sbjct: 13 ITGSARGIGRAFAEAYVRE-GATVAIADIDIERARQAAAEIGPAAYAVQXDVTRQDSIDA 71
Query: 55 LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFAL--IDVCDILFPLLR 112
GG+D+LVNNAA+ F + + + R +Y L I+V LF L
Sbjct: 72 AIAATVEHAGGLDILVNNAAL-FDL-------APIVEITRESYEKLFAINVAGTLFTLQA 123
Query: 113 SH---------GRVVNVSSSCGH 126
+ G+++N +S G
Sbjct: 124 AARQXIAQGRGGKIINXASQAGR 146
>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|B Chain B, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|C Chain C, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|D Chain D, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
Length = 303
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ--------------KLDI 46
VTG GIG IVK L++ ++ + +R R + A ++LQ + +I
Sbjct: 23 VTGGATGIGKAIVKELLELGSNVV-IASRKLERLKSAADELQANLPPTKQARVIPIQCNI 81
Query: 47 LDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCD 105
++ + L G ++ LVNN F ++ +E S+ H + TN +C
Sbjct: 82 RNEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCK 140
Query: 106 ILF-PLLRSH-GRVVN--VSSSCGHLCHVTSEALKKKLLHEIKSV 146
++ ++ H G +VN V + G V S A + + + KS+
Sbjct: 141 AVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSL 185
>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
pdb|1K2W|B Chain B, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
Length = 256
Score = 33.5 bits (75), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 50/237 (21%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGI----IYLTARDASRGQEALEKLQ-KLDILDKNSIKAL 55
+TG+ +GIG + +++ + I L A A+ + LD+ D+ SI
Sbjct: 10 ITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRC 69
Query: 56 HDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFAL--IDVCDILFPLLRS 113
L G +D+LVNNAA+ F + + + R +Y L I+V LF ++++
Sbjct: 70 VAELLDRWGSIDILVNNAAL-FDL-------APIVEITRESYDRLFAINVSGTLF-MMQA 120
Query: 114 HGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNS 173
R + G + ++ S+A ++ E L +
Sbjct: 121 VARAMIAGGRGGKIINMASQAGRRG--------EALVGV--------------------- 151
Query: 174 AYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKGPLTIDQDNI 230
Y ATK V +S Q A L + IR + VN + PG V+ + G D +N+
Sbjct: 152 -YCATKAAV--ISLTQSAGL--NLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENL 203
>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy
Benzoate Dehydrogenase
Length = 250
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 82/220 (37%), Gaps = 52/220 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALE-KLQKLDILDKNSIKALHDHL 59
VTGA KGIGY + + +T D + QE + +D+ D + + L
Sbjct: 12 VTGAGKGIGYATALAFV---EAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRL 68
Query: 60 EAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGRVVN 119
AE +D LVN A I ++ +++ + FA VN
Sbjct: 69 LAETERLDALVNAAGI-LRMGATDQLSKEDWQ----QTFA------------------VN 105
Query: 120 VSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPN---SAYA 176
V + +L T +++ I V +A D +HT P SAY
Sbjct: 106 VGGAF-NLFQQTMNQFRRQRGGAI-------------VTVASDAAHT----PRIGMSAYG 147
Query: 177 ATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
A+K + L+ L+ +R N V PG +TDM
Sbjct: 148 ASKAALKSLALSVGLELAGSGVR----CNVVSPGSTDTDM 183
>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|B Chain B, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|C Chain C, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|D Chain D, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
Length = 256
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 48/219 (21%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----KLDILDKNSIKALH 56
VTG +GIG I + ++ G + G+E E + ++D+ D+
Sbjct: 11 VTGGARGIGRAIAQAFARE--GALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFV 68
Query: 57 DHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGR 116
+ G VDVLVNNAAIA AL + +++V ++ P+
Sbjct: 69 EEAAYALGRVDVLVNNAAIAAP--------GSALTVRLPEWRRVLEV-NLTAPM------ 113
Query: 117 VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYA 176
HL + + ++K I +V + L E Q+ N+AY
Sbjct: 114 ---------HLSALAAREMRKVGGGAIVNVASVQGLFAE-----QE---------NAAYN 150
Query: 177 ATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTD 215
A+K G+ L+ L+ IR VN V PG + T+
Sbjct: 151 ASKGGLVNLTRSLALDLAPLRIR----VNAVAPGAIATE 185
>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon
Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp
Length = 235
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 13/88 (14%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK----------LDILDK 49
+TGA++GIG I + L + DG + L AR R ++ +L + LD+
Sbjct: 7 ITGASRGIGEAIARALAR--DGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKA 64
Query: 50 NSIKALHDHLEAEHGGVDVLVNNAAIAF 77
S++ + G VDV+V NA + +
Sbjct: 65 ESVEEFSKKVLERFGDVDVVVANAGLGY 92
>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|B Chain B, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|C Chain C, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|D Chain D, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
Length = 263
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 164 SHTKGGWPNSAYAATKLGVTKLS---------FLQHALLSQDAIREDLVVNCVHPGYVNT 214
S+TKG N+A A K+G L+ F L+++ +++ VNCV PG+V T
Sbjct: 135 SNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKT 194
Query: 215 DM 216
M
Sbjct: 195 AM 196
>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
pdb|3TN7|B Chain B, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
Length = 257
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 13/88 (14%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK----------LDILDK 49
+TGA++GIG I + L + DG + L AR R ++ +L + LD+
Sbjct: 29 ITGASRGIGEAIARALAR--DGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKA 86
Query: 50 NSIKALHDHLEAEHGGVDVLVNNAAIAF 77
S++ + G VDV+V NA + +
Sbjct: 87 ESVEEFSKKVLERFGDVDVVVANAGLGY 114
>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
Length = 277
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 21/142 (14%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ----------KLDILDKN 50
+TG GIG+ I + + + + +R R A KL +D+
Sbjct: 32 ITGGGSGIGFRIAE-IFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPP 90
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRT----NYFALIDVCDI 106
++ A D E G +D+L+N AA F P G+ + + +T + +V +
Sbjct: 91 AVMAAVDQALKEFGRIDILINCAAGNFLC----PAGALSFNAFKTVMDIDTSGTFNVSRV 146
Query: 107 LF-PLLRSHGRV-VNVSSSCGH 126
L+ R HG V VN++++ G+
Sbjct: 147 LYEKFFRDHGGVIVNITATLGN 168
>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|B Chain B, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|C Chain C, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|D Chain D, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
Length = 261
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 88/239 (36%), Gaps = 77/239 (32%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEALEKLQK--LDIL---------- 47
VT + GIG+ I + L Q DG + +++R +A+ LQ L +
Sbjct: 20 VTASTDGIGFAIARRLAQ--DGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAE 77
Query: 48 DKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDIL 107
D+ + A L HGG+D+LV+NAA+ PF
Sbjct: 78 DRERLVATAVKL---HGGIDILVSNAAV-------NPF---------------------- 105
Query: 108 FPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFV--ELAQDG-- 163
G + VT E K L +K+ ALM + V E+ + G
Sbjct: 106 ----------------FGSIMDVTEEVWDKTLDINVKA----PALMTKAVVPEMEKRGGG 145
Query: 164 -----SHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
S P+ ++ + T L L L + A R ++ VNC+ PG + T S
Sbjct: 146 SVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPR-NIRVNCLAPGLIKTSFS 203
>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|B Chain B, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|C Chain C, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|D Chain D, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|E Chain E, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|F Chain F, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|G Chain G, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|H Chain H, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|3VDR|A Chain A, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|B Chain B, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|C Chain C, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|D Chain D, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDQ|A Chain A, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|B Chain B, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|C Chain C, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|D Chain D, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
Length = 260
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 82/231 (35%), Gaps = 62/231 (26%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGII---YLTARDASRGQEALEK-------LQKLDILDKN 50
VTG+ GIG + L + ++ + D R + LE D+ D
Sbjct: 9 VTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLNADLSDAQ 68
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
+ + GG+D+LVNNA I E + + N A+ P+
Sbjct: 69 ATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAAALPI 128
Query: 111 LRSH--GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
++ GR++N++S+ G + V
Sbjct: 129 MQKQGWGRIINIASAHGLVASVN------------------------------------- 151
Query: 169 GWPNSAYAATK---LGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDM 216
SAY A K +G+TK++ L++A + + N + PG+V T +
Sbjct: 152 ---KSAYVAAKHGVVGLTKVTALENA-------GKGITCNAICPGWVRTPL 192
>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
pdb|1XHL|B Chain B, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
Length = 297
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 18/138 (13%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
+TG++ GIG + + + +T R+ R +E +++ K + + + D E
Sbjct: 31 ITGSSNGIGRSAAV-IFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE 89
Query: 61 A------------EHGGVDVLVNNAAIAF---KVNSSEPFGSQALHTMRTNYFALIDVCD 105
A + G +D+LVNNA N+ +P T + N+ A+I++
Sbjct: 90 ASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPV-ELYQKTFKLNFQAVIEMTQ 148
Query: 106 ILFP-LLRSHGRVVNVSS 122
L+++ G +VNVSS
Sbjct: 149 KTKEHLIKTKGEIVNVSS 166
>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
pdb|3KVO|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
Length = 346
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 19/91 (20%)
Query: 1 VTGANKGIGYGIVKGLIQ----------------QFDGIIYLTARD-ASRGQEALEKLQK 43
+TGA++GIG I + + G IY A + + G +AL +
Sbjct: 50 ITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCI-- 107
Query: 44 LDILDKNSIKALHDHLEAEHGGVDVLVNNAA 74
+D+ D+ I A + + GG+D+LVNNA+
Sbjct: 108 VDVRDEQQISAAVEKAIKKFGGIDILVNNAS 138
>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IJK|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Length = 271
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 57/230 (24%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGI-IYLTARDASRGQEAL-----EKLQKLDIL------D 48
+TGA+KGIG I K L G+ +++ R + +AL EK K ++ +
Sbjct: 34 ITGASKGIGAEIAKTLASM--GLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASE 91
Query: 49 KNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILF 108
+ I+A+ ++++ GG+ LVNNA + + M+T F
Sbjct: 92 SDFIEAIQTIVQSD-GGLSYLVNNAGVV---------RDKLAIKMKTEDF---------- 131
Query: 109 PLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
H + N +S C EALK SV +++++ E +G
Sbjct: 132 -----HHVIDNNLTSAFIGCR---EALKVMSKSRFGSVVNVASIIGE-----------RG 172
Query: 169 GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
+ Y+A+K G+ +S + + A+R ++ N V PG++ TDM++
Sbjct: 173 NMGQTNYSASKGGMIAMS---KSFAYEGALR-NIRFNSVTPGFIETDMNA 218
>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|B Chain B, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|C Chain C, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|D Chain D, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|A Chain A, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|B Chain B, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
Length = 249
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 53/135 (39%), Gaps = 8/135 (5%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
+TG GIG I + + I A + A+ L K D+ ++A
Sbjct: 12 ITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEA 71
Query: 55 LHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSH 114
+ + G D+LVNNA I + E Q T N + + P ++ +
Sbjct: 72 FGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN 131
Query: 115 --GRVVNVSSSCGHL 127
GR++N++S+ L
Sbjct: 132 GWGRIINLTSTTYWL 146
>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
Length = 245
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
VTGA G+G IVK L + D I+Y R+ AL +++ ++ ++ + +K +
Sbjct: 10 VTGATGGMGIEIVKDLSR--DHIVYALGRNPEH-LAALAEIEGVEPIESDIVKEV----- 61
Query: 61 AEHGGVDVLVN--------NAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILFPLL 111
E GGVD L N +AA + + E H + N ++ L P L
Sbjct: 62 LEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPAL 121
Query: 112 R-SHGRVVNVSSSCGHLCH 129
R + G V+ ++S G+ H
Sbjct: 122 RAASGCVIYINSGAGNGPH 140
>pdb|1YO6|A Chain A, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
pdb|1YO6|B Chain B, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
pdb|1YO6|C Chain C, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
pdb|1YO6|D Chain D, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
pdb|1YO6|E Chain E, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
pdb|1YO6|F Chain F, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
Length = 250
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 1 VTGANKGIGYGIVKGLIQQFD-GIIYLTARDASRGQE 36
VTGAN+GIG G+V+ L++ + I TARD + E
Sbjct: 8 VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE 44
>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFF|B Chain B, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFQ|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 86/223 (38%), Gaps = 49/223 (21%)
Query: 1 VTGANKGIGYGIVKGLIQQ-----FDGIIYLTARDASRGQEALEKLQKLDILDKNSIKAL 55
V+G +G+G V+ ++ + F I+ + + + LD+ KA
Sbjct: 12 VSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAA 71
Query: 56 HDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDV-CDILFPLLRSH 114
D GG+ VLVNNA I + + E + AL T + ++DV +F +R+
Sbjct: 72 VDTAVTAFGGLHVLVNNAGI-LNIGTIEDY---AL----TEWQRILDVNLTGVFLGIRA- 122
Query: 115 GRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSA 174
+ EA + +++ I S+E L+ + H
Sbjct: 123 ------------VVKPMKEAGRGSIIN-ISSIEGLAGTV---------ACH--------G 152
Query: 175 YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
Y ATK V L+ L IR VN +HPG V T M+
Sbjct: 153 YTATKFAVRGLTKSTALELGPSGIR----VNSIHPGLVKTPMT 191
>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
pdb|3DWF|B Chain B, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
pdb|3DWF|C Chain C, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
pdb|3DWF|D Chain D, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
Length = 276
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG I L + ++ +TAR Q+ + + +L + I ++ D
Sbjct: 16 VTGASKGIGREIAYHLAKMGAHVV-VTARSKEALQKVVARCLELGAASAHYIAGSMEDMT 74
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
AE GG+D+L+ N + ++ +M N+ + + + P
Sbjct: 75 FAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSFVVLSVAAMPM 134
Query: 110 LLRSHGRVVNVSSSCGHLCH 129
L++S G + VSS G + +
Sbjct: 135 LMQSQGSIAVVSSVAGKITY 154
>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
pdb|3G49|B Chain B, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
pdb|3G49|C Chain C, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
pdb|3G49|D Chain D, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
Length = 277
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG I L + ++ +TAR Q+ + + +L + I ++ D
Sbjct: 16 VTGASKGIGREIAYHLAKMGAHVV-VTARSKEALQKVVARCLELGAASAHYIAGSMEDMT 74
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
AE GG+D+L+ N + ++ +M N+ + + + P
Sbjct: 75 FAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSFVVLSVAAMPM 134
Query: 110 LLRSHGRVVNVSSSCGHLCH 129
L++S G + VSS G + +
Sbjct: 135 LMQSQGSIAVVSSVAGKITY 154
>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1
pdb|1XSE|B Chain B, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1
Length = 295
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG I L + ++ +TAR Q+ + + +L + I ++ D
Sbjct: 37 VTGASKGIGREIAYHLAKMGAHVV-VTARSKEALQKVVARCLELGAASAHYIAGSMEDMT 95
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
AE GG+D+L+ N + ++ +M N+ + + + P
Sbjct: 96 FAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSFVVLSVAAMPM 155
Query: 110 LLRSHGRVVNVSSSCGHLCH 129
L++S G + VSS G + +
Sbjct: 156 LMQSQGSIAVVSSVAGKITY 175
>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
pdb|3LZ6|B Chain B, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
pdb|3LZ6|C Chain C, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
pdb|3LZ6|D Chain D, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
Length = 263
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG I L + ++ +TAR Q+ + + +L + I ++ D
Sbjct: 14 VTGASKGIGREIAYHLAKMGAHVV-VTARSKEALQKVVARCLELGAASAHYIAGSMEDMT 72
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFP- 109
AE GG+D+L+ N + ++ +M N+ + + + P
Sbjct: 73 FAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSFVVLSVAAMPM 132
Query: 110 LLRSHGRVVNVSSSCGHLCH 129
L++S G + VSS G + +
Sbjct: 133 LMQSQGSIAVVSSVAGKITY 152
>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
pdb|3UF0|B Chain B, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
Length = 273
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 84/223 (37%), Gaps = 54/223 (24%)
Query: 1 VTGANKGIGYGIVKGLIQ---------QFDGIIYLTARDASRGQEALEKLQKLDILDKNS 51
VTGA GIG I G + + DG+ + A G A + D+ D
Sbjct: 36 VTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVA--DLADLEG 93
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
+ + L A VDVLVNNA I + + E + + N D + L
Sbjct: 94 AANVAEELAATRR-VDVLVNNAGIIARAPAEEVSLGRWREVLTVN-------LDAAWVLS 145
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWP 171
RS G + ++ G + + S M F +GG
Sbjct: 146 RSFGTAM-LAHGSGRIVTIAS--------------------MLSF----------QGGRN 174
Query: 172 NSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
+AYAA+K V L+ AL S+ A R + VN + PGYV T
Sbjct: 175 VAAYAASKHAVVGLT---RALASEWAGR-GVGVNALAPGYVVT 213
>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
Length = 262
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 17/141 (12%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL----------DILDKN 50
VTG KGIG GI + + + + R + + L +L D+ D+
Sbjct: 15 VTGGTKGIGRGIAT-VFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRA 73
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAI----AFKVNSSEPFGSQALHTMRTNYFALIDVCDI 106
AL E GG+DV+ NA + + E + ++A+ D
Sbjct: 74 QCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDA 133
Query: 107 LFPLLRSHGRVVNVSSSCGHL 127
L + GRVV SS G +
Sbjct: 134 L--IASGSGRVVLTSSITGPI 152
>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|B Chain B, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|C Chain C, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|D Chain D, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|E Chain E, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|F Chain F, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|G Chain G, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|H Chain H, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
Length = 291
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 10/132 (7%)
Query: 1 VTGANKGIGYGIVKGLIQQFD--GIIYLTAR-DASRGQEALEK------LQKLDILDKNS 51
+TG + GIG + ++ I YL DA+ ++ +EK L D+ D+
Sbjct: 52 ITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQH 111
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFPL 110
K + + G +++LVNN A + E ++ L T R N F+ V
Sbjct: 112 CKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSH 171
Query: 111 LRSHGRVVNVSS 122
L+ ++N +S
Sbjct: 172 LKQGDVIINTAS 183
>pdb|3N58|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
pdb|3N58|B Chain B, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
pdb|3N58|C Chain C, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
pdb|3N58|D Chain D, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
Length = 464
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 89 ALHTMR-TNYFALIDVCDILFP-----LLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHE 142
AL ++ TN +D+ I FP +L S GR++N+ ++ GH V S + ++L +
Sbjct: 344 ALRNLKWTNVKPQVDL--IEFPDGKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQ 401
Query: 143 IKSVEELSALMNEFVELAQ 161
I+ A NE L +
Sbjct: 402 IELFTRTDAYKNEVYVLPK 420
>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|B Chain B, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|C Chain C, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|D Chain D, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|E Chain E, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|F Chain F, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|G Chain G, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|H Chain H, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
Length = 291
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 10/132 (7%)
Query: 1 VTGANKGIGYGIVKGLIQQFD--GIIYLTAR-DASRGQEALEK------LQKLDILDKNS 51
+TG + GIG + ++ I YL DA+ ++ +EK L D+ D+
Sbjct: 52 ITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQH 111
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALH-TMRTNYFALIDVCDILFPL 110
K + + G +++LVNN A + E ++ L T R N F+ V
Sbjct: 112 CKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSH 171
Query: 111 LRSHGRVVNVSS 122
L+ ++N +S
Sbjct: 172 LKQGDVIINTAS 183
>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|B Chain B, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|C Chain C, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|D Chain D, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|E Chain E, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|F Chain F, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|G Chain G, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|H Chain H, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|I Chain I, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|J Chain J, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|K Chain K, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|L Chain L, Mannitol Dehydrogenase From Agaricus Bisporus
Length = 265
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 90/230 (39%), Gaps = 49/230 (21%)
Query: 1 VTGANKGIGYGIVK--GLIQQFDGIIYLTARDASRGQEAL-------EKLQKLDILDKNS 51
VTG N+GIG + +IY +A DA E + K + D+ + +
Sbjct: 19 VTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDI 78
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
+ ++A+ G + L+ NA ++ ++E N F + + C + L
Sbjct: 79 VTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLW 138
Query: 112 ---RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKG 168
+ G +V SS ++S+ + + L +GS T+
Sbjct: 139 LQKQQKGSIVVTSS-------MSSQIINQSSL---------------------NGSLTQV 170
Query: 169 GWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSS 218
+ +S A + L V L+ A + IR VN + PGYVNTD ++
Sbjct: 171 FYNSSKAACSNL-VKGLA----AEWASAGIR----VNALSPGYVNTDQTA 211
>pdb|3IPW|A Chain A, Crystal Structure Of Hydrolase Tatd Family Protein From
Entamoeba Histolytica
Length = 325
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 5 NKGIGYGIVKGLIQQFDGI------IYLTARDASRGQEALEKLQKLDILDKNSIKALHDH 58
NK +GY KG++ FDG I D +L+ ++ L+++ + I+ LH
Sbjct: 186 NKELGYNGCKGVVHCFDGTEEEMNQILNEGWDIGVTGNSLQSIELLNVMKQIPIERLHIE 245
Query: 59 LEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNY 97
+ + G + + FK + FG + R Y
Sbjct: 246 TDCPYCG----IKKTSAGFKYLKEKDFGVKVEKYQRNKY 280
>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Sulfone Inhibitor
Length = 275
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG + L + ++ +TAR Q+ + +L + I + D
Sbjct: 29 VTGASKGIGREMAYHLAKMGAHVV-VTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 87
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
AE GG+D+L+ N +N +M N+ + + + P+
Sbjct: 88 FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM 147
Query: 111 LR-SHGRVVNVSSSCGHLCH 129
L+ S+G +V VSS G + +
Sbjct: 148 LKQSNGSIVVVSSLAGKVAY 167
>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|B Chain B, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|C Chain C, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|D Chain D, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|E Chain E, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|F Chain F, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|G Chain G, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|H Chain H, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
Length = 264
Score = 30.4 bits (67), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG + L + ++ +TAR Q+ + +L + I + D
Sbjct: 14 VTGASKGIGREMAYHLAKMGAHVV-VTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 72
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
AE GG+D+L+ N +N +M N+ + + + P+
Sbjct: 73 FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM 132
Query: 111 LR-SHGRVVNVSSSCGHLCH 129
L+ S+G +V VSS G + +
Sbjct: 133 LKQSNGSIVVVSSLAGKVAY 152
>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|B Chain B, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|C Chain C, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|D Chain D, Crystal Structure Of A Mammalian Reductase
Length = 260
Score = 30.4 bits (67), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 33/144 (22%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKL------QKLDIL------- 47
VT + GIG I + L Q ++ +SR QE +++ + L +
Sbjct: 19 VTASTDGIGLAIARRLAQDGAHVVV-----SSRKQENVDRTVATLQGEGLSVTGTVCHVG 73
Query: 48 ---DKNSIKALHDHLEAEHGGVDVLVNNAAI----AFKVNSSEPFGSQALHTMRTNYFAL 100
D+ + A+ +L HGGVD+LV+NAA+ ++++E + LH N A
Sbjct: 74 KAEDRERLVAMAVNL---HGGVDILVSNAAVNPFFGNIIDATEEVWDKILH---VNVKAT 127
Query: 101 IDVCDILFPLL--RSHGRVVNVSS 122
+ + + P + R G V+ VSS
Sbjct: 128 VLMTKAVVPEMEKRGGGSVLIVSS 151
>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|B Chain B, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|C Chain C, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|D Chain D, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
Length = 269
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 22/133 (16%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
VTG + GIG +V L++ ++ ++ + S + K+D+ ++ +K +
Sbjct: 19 VTGGSSGIGLAVVDALVRYGAKVVSVSLDEKS--DVNVSDHFKIDVTNEEEVKEAVEKTT 76
Query: 61 AEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTN-YFALIDV--------CDILFPLL 111
++G +D+LVNNA I E + LH T + +IDV P++
Sbjct: 77 KKYGRIDILVNNAGI-------EQY--SPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVM 127
Query: 112 RS--HGRVVNVSS 122
+ HG ++N++S
Sbjct: 128 LAIGHGSIINIAS 140
>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB6|B Chain B, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
Length = 292
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG + L + ++ +TAR Q+ + +L + I + D
Sbjct: 39 VTGASKGIGREMAYHLAKMGAHVV-VTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 97
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
AE GG+D+L+ N +N +M N+ + + + P+
Sbjct: 98 FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM 157
Query: 111 LR-SHGRVVNVSSSCGHLCH 129
L+ S+G +V VSS G + +
Sbjct: 158 LKQSNGSIVVVSSLAGKVAY 177
>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|B Chain B, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|C Chain C, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|D Chain D, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
Length = 272
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG + L + ++ +TAR Q+ + +L + I + D
Sbjct: 19 VTGASKGIGREMAYHLAKMGAHVV-VTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 77
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
AE GG+D+L+ N +N +M N+ + + + P+
Sbjct: 78 FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM 137
Query: 111 LR-SHGRVVNVSSSCGHLCH 129
L+ S+G +V VSS G + +
Sbjct: 138 LKQSNGSIVVVSSLAGKVAY 157
>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|B Chain B, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|C Chain C, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|D Chain D, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU9|A Chain A, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|B Chain B, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|C Chain C, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|D Chain D, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|3BZU|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3CZR|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With
Arylsulfonylpiperazine Inhibitor
pdb|3CZR|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With
Arylsulfonylpiperazine Inhibitor
pdb|3D3E|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D4N|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3FRJ|A Chain A, Crystal Structure Of 11b-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Piperidyl Benzamide Inhibitor
pdb|3FRJ|B Chain B, Crystal Structure Of 11b-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Piperidyl Benzamide Inhibitor
pdb|3HFG|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3FCO|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Benzamide Inhibitor
pdb|3FCO|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Benzamide Inhibitor
pdb|3H6K|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3OQ1|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|C Chain C, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|D Chain D, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3QQP|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|C Chain C, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|D Chain D, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
Length = 286
Score = 30.4 bits (67), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG + L + ++ +TAR Q+ + +L + I + D
Sbjct: 33 VTGASKGIGREMAYHLAKMGAHVV-VTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 91
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
AE GG+D+L+ N +N +M N+ + + + P+
Sbjct: 92 FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM 151
Query: 111 LR-SHGRVVNVSSSCGHLCH 129
L+ S+G +V VSS G + +
Sbjct: 152 LKQSNGSIVVVSSLAGKVAY 171
>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase 1 (11b-Hsd1) In Complex With
4,4-Disubstituted Cyclohexylbenzamide Inhibitor
pdb|3PDJ|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase 1 (11b-Hsd1) In Complex With
4,4-Disubstituted Cyclohexylbenzamide Inhibitor
Length = 273
Score = 30.4 bits (67), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG + L + ++ +TAR Q+ + +L + I + D
Sbjct: 20 VTGASKGIGREMAYHLAKMGAHVV-VTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 78
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
AE GG+D+L+ N +N +M N+ + + + P+
Sbjct: 79 FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM 138
Query: 111 LR-SHGRVVNVSSSCGHLCH 129
L+ S+G +V VSS G + +
Sbjct: 139 LKQSNGSIVVVSSLAGKVAY 158
>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In
Complex With An Orally Bioavailable Acidic Inhibitor
Azd4017.
pdb|4HFR|B Chain B, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In
Complex With An Orally Bioavailable Acidic Inhibitor
Azd4017
Length = 272
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG + L + ++ +TAR Q+ + +L + I + D
Sbjct: 19 VTGASKGIGREMAYHLAKMGAHVV-VTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 77
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
AE GG+D+L+ N +N +M N+ + + + P+
Sbjct: 78 FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM 137
Query: 111 LR-SHGRVVNVSSSCGHLCH 129
L+ S+G +V VSS G + +
Sbjct: 138 LKQSNGSIVVVSSLAGKVAY 157
>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|B Chain B, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|C Chain C, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|D Chain D, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|3BYZ|A Chain A, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|B Chain B, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|C Chain C, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|D Chain D, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3EY4|A Chain A, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|B Chain B, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|C Chain C, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|D Chain D, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
Length = 275
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG + L + ++ +TAR Q+ + +L + I + D
Sbjct: 22 VTGASKGIGREMAYHLAKMGAHVV-VTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 80
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
AE GG+D+L+ N +N +M N+ + + + P+
Sbjct: 81 FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM 140
Query: 111 LR-SHGRVVNVSSSCGHLCH 129
L+ S+G +V VSS G + +
Sbjct: 141 LKQSNGSIVVVSSLAGKVAY 160
>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|B Chain B, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|C Chain C, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|D Chain D, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
Length = 292
Score = 30.0 bits (66), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG + L + ++ +TAR Q+ + +L + I + D
Sbjct: 39 VTGASKGIGREMAYHLAKMGAHVV-VTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 97
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
AE GG+D+L+ N +N +M N+ + + + P+
Sbjct: 98 FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM 157
Query: 111 LR-SHGRVVNVSSSCGHLCH 129
L+ S+G +V VSS G + +
Sbjct: 158 LKQSNGSIVVVSSLAGKVAY 177
>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|B Chain B, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|D Chain D, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|E Chain E, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3TFQ|A Chain A, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|B Chain B, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|D Chain D, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|E Chain E, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
Length = 286
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG + L + ++ +TAR Q+ + +L + I + D
Sbjct: 33 VTGASKGIGREMAYHLAKMGAHVV-VTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 91
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
AE GG+D+L+ N +N +M N+ + + + P+
Sbjct: 92 FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM 151
Query: 111 LR-SHGRVVNVSSSCGHLCH 129
L+ S+G +V VSS G + +
Sbjct: 152 LKQSNGSIVVVSSLAGKVAY 171
>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|B Chain B, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|C Chain C, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|D Chain D, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
Length = 283
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG + L + ++ +TAR Q+ + +L + I + D
Sbjct: 36 VTGASKGIGREMAYHLAKMGAHVV-VTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 94
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPL 110
AE GG+D+L+ N +N +M N+ + + + P+
Sbjct: 95 FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM 154
Query: 111 LR-SHGRVVNVSSSCGHLCH 129
L+ S+G +V VSS G + +
Sbjct: 155 LKQSNGSIVVVSSLAGKVAY 174
>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHI|B Chain B, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHH|A Chain A, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1AHH|B Chain B, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1FMC|A Chain A, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
pdb|1FMC|B Chain B, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
Length = 255
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 17/127 (13%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
+TGA GIG I ++ ++ +A ++++Q+L DI +
Sbjct: 16 ITGAGAGIGKEIAITFATAGASVV-VSDINADAANHVVDEIQQLGGQAFACRCDITSEQE 74
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRT---NYFALIDVCDILF 108
+ AL D ++ G VD+LVNNA +PF R N F+ + ++
Sbjct: 75 LSALADFAISKLGKVDILVNNAG----GGGPKPFDMPMADFRRAYELNVFSFFHLSQLVA 130
Query: 109 PLLRSHG 115
P + +G
Sbjct: 131 PEMEKNG 137
>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL
Dehydrogenase From Clostridium Thermocellum
Length = 247
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 17/139 (12%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEK----------LQKLDILDKN 50
VTG+++G+G I L I L AS +A + + K D+ +
Sbjct: 10 VTGSSRGLGKAIAWKL-GNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPE 68
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAI---AFKVNSSEPFGSQALHT-MRTNYFALIDVCDI 106
++ + G +D+LVNNA I + SE L+T +++ Y V I
Sbjct: 69 DVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKI 128
Query: 107 LFPLLRSHGRVVNVSSSCG 125
+ L + G+++N++S G
Sbjct: 129 M--LKQKSGKIINITSIAG 145
>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
pdb|4E3Z|B Chain B, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
Length = 272
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 56/235 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQ--FDGIIYLTARDAS---------RGQEALEKLQKLDILDK 49
VTG ++GIG + + +Q G+ Y R+A+ G EA+ D+ +
Sbjct: 31 VTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAI--PGDVGNA 88
Query: 50 NSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDI--L 107
I A ++ + G +D LVNNA I +Y +D + +
Sbjct: 89 ADIAAXFSAVDRQFGRLDGLVNNAGI-------------------VDYPQRVDEXSVERI 129
Query: 108 FPLLRSHGRVVNVSSSCGHLCHVTSEALKK-KLLHEIKSVEELSALMNEFVELAQDGSHT 166
LR VNV+ S LC +EA+++ L+ + A++N A GS T
Sbjct: 130 ERXLR-----VNVTGSI--LC--AAEAVRRXSRLYSGQG----GAIVNVSSXAAILGSAT 176
Query: 167 KGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGKG 221
+ YAA+K + + L+++ E + VN V PG + TD+ + G
Sbjct: 177 Q----YVDYAASKAAIDTFTIG----LAREVAAEGIRVNAVRPGIIETDLHASGG 223
>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|D Chain D, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|C Chain C, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|F Chain F, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|E Chain E, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|H Chain H, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|G Chain G, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 271
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 19/148 (12%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIY-------LTARDASRGQEALEKLQKLDILDKNSIK 53
+TGA GIG + L + ++ L AS G+ A+ + +D+ ++ S++
Sbjct: 16 ITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHV--VDLTNEVSVR 73
Query: 54 ALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL-----HTMRTNYFALIDVCDILF 108
AL D G +D++ NNAA + ++ +Q T N + +C
Sbjct: 74 ALIDFTIDTFGRLDIVDNNAA---HSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAI 130
Query: 109 PLLRSHG--RVVNVSSSCGHLCHVTSEA 134
P L S G +VN+SS+ H + S A
Sbjct: 131 PRLISAGGGAIVNISSATAHAAYDMSTA 158
>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
SDR FROM Xanthobacter Autotrophicus Py2
Length = 272
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ------KLDILDKNSIKA 54
VTGA G+G + L G+ L R QE ++ D+ D +S++A
Sbjct: 33 VTGAGSGVGRAVAVALAGAGYGVA-LAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRA 91
Query: 55 LHDHLEAEHGGVDVLVNNA 73
L + G VDVL NNA
Sbjct: 92 LFTATVEKFGRVDVLFNNA 110
>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
Length = 261
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 95/231 (41%), Gaps = 54/231 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
+TG++ G+G + + ++ LE+++K+ D+ ++
Sbjct: 12 ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESD 71
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
+ L E G +DV++NNA +A V+S H M L
Sbjct: 72 VINLVQSAIKEFGKLDVMINNAGLANPVSS---------HEMS----------------L 106
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK-SVEELSALMNEFVELAQDGSHTKGGW 170
+V++ + + L + EA+K + ++IK +V +S++ H K W
Sbjct: 107 SDWNKVIDTNLTGAFLG--SREAIKYFVENDIKGTVINMSSV------------HEKIPW 152
Query: 171 PNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
P YAA+K G+ L L+ + + + VN + PG +NT +++ K
Sbjct: 153 PLFVHYAASKGGMK----LMTETLALEYAPKGIRVNNIGPGAINTPINAEK 199
>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|B Chain B, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|C Chain C, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|D Chain D, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|E Chain E, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|F Chain F, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|G Chain G, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|H Chain H, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
Length = 266
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK----------LDILDKN 50
+TGA KGIG I + ++ L+ RD S A L + +D+ + +
Sbjct: 25 ITGATKGIGADIARAFAAAGARLV-LSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPD 83
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIA 76
+ L GG+DVLVNNA I+
Sbjct: 84 APAELARRAAEAFGGLDVLVNNAGIS 109
>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|B Chain B, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|C Chain C, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|D Chain D, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|E Chain E, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|F Chain F, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|G Chain G, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|H Chain H, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
Length = 264
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 20/144 (13%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG + L + + LTAR Q+ + + +L + I + D
Sbjct: 14 VTGASKGIGREMAYHL-SKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMT 72
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMR----TNYFALIDVCDI 106
AE GG+D+L+ N +S +H++R N+ + + +
Sbjct: 73 FAEQFIVKAGKLMGGLDMLILNHI----TQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTA 128
Query: 107 LFPLLR-SHGRVVNVSSSCGHLCH 129
P+L+ S+G + +SS G + +
Sbjct: 129 ALPMLKQSNGSIAVISSLAGKVTY 152
>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid
Dehydrogenase: An Important Therapeutic Target For
Diabetes
pdb|1Y5M|B Chain B, The Crystal Structure Of Murine 11b-Hydroxysteroid
Dehydrogenase: An Important Therapeutic Target For
Diabetes
pdb|1Y5R|A Chain A, The Crystal Structure Of Murine 11b-hydroxysteroid
Dehydrogenase Complexed With Corticosterone
pdb|1Y5R|B Chain B, The Crystal Structure Of Murine 11b-hydroxysteroid
Dehydrogenase Complexed With Corticosterone
Length = 276
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIK-ALHDHL 59
VTGA+KGIG + L + + LTAR Q+ + + +L + I + D
Sbjct: 23 VTGASKGIGREMAYHL-SKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMT 81
Query: 60 EAEH---------GGVDVLVNNAAIAFKVNSSEPFGSQALHTMR----TNYFALIDVCDI 106
AE GG+D+L+ N +S +H++R N+ + + +
Sbjct: 82 FAEQFIVKAGKLMGGLDMLILNHI----TQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTA 137
Query: 107 LFPLLR-SHGRVVNVSSSCGHLCH 129
P+L+ S+G + +SS G +
Sbjct: 138 ALPMLKQSNGSIAVISSLAGKMTQ 161
>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein)
Reductase (target Efi-506442) From Agrobacterium
Tumefaciens C58 With Nadp Bound
pdb|4IMR|B Chain B, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein)
Reductase (target Efi-506442) From Agrobacterium
Tumefaciens C58 With Nadp Bound
Length = 275
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 49/227 (21%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKLDILDKNSIKALHDHLE 60
VTG+++GIG I +GL +I + S +Q+ I + + L L
Sbjct: 38 VTGSSRGIGAAIAEGLAGAGAHVILHGVKPGS-----TAAVQQRIIASGGTAQELAGDLS 92
Query: 61 AEHGGVDVLVNNAAIA----FKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLLRSHGR 116
G D++ AIA +N+S + L + N D+ F L
Sbjct: 93 EAGAGTDLIERAEAIAPVDILVINASAQINA-TLSALTPN--------DLAFQL------ 137
Query: 117 VVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQDGSHTKGGWPNSAYA 176
VN+ S+ L + + +K + S+ ++ L + V +AYA
Sbjct: 138 AVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRPKSVV--------------TAYA 182
Query: 177 ATKLGVTKLSFLQHALL---SQDAIREDLVVNCVHPGYVNTDMSSGK 220
ATK QH L+ ++D +++++N + PG V+TD ++ +
Sbjct: 183 ATKAA-------QHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADR 222
>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2
Homolog) Mycobacterium Thermoresistibile
pdb|3SC4|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2
Homolog) Mycobacterium Thermoresistibile
Length = 285
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 19/91 (20%)
Query: 1 VTGANKGIGYGIVKGLI----------------QQFDGIIYLTARDASR-GQEALEKLQK 43
++G ++GIG I K + + G IY A++ G +AL +
Sbjct: 14 ISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVG- 72
Query: 44 LDILDKNSIKALHDHLEAEHGGVDVLVNNAA 74
DI D +++ A + GG+D+ VNNA+
Sbjct: 73 -DIRDGDAVAAAVAKTVEQFGGIDICVNNAS 102
>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
pdb|3F9I|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
Length = 249
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 169 GWPNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
G P A Y A+K G+ ++ LS + + VN V PG++ +DM+
Sbjct: 149 GNPGQANYCASKAGLIGMT----KSLSYEVATRGITVNAVAPGFIKSDMT 194
>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6
pdb|2AG5|B Chain B, Crystal Structure Of Human Dhrs6
pdb|2AG5|C Chain C, Crystal Structure Of Human Dhrs6
pdb|2AG5|D Chain D, Crystal Structure Of Human Dhrs6
Length = 246
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 156 FVELAQDGSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
+ ++ S KG Y+ TK V L+ ++ D I++ + NCV PG V+T
Sbjct: 128 IINMSSVASSVKGVVNRCVYSTTKAAVIGLT----KSVAADFIQQGIRCNCVCPGTVDT 182
>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|B Chain B, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|C Chain C, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|D Chain D, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|E Chain E, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|F Chain F, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|G Chain G, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|H Chain H, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|I Chain I, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|J Chain J, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|K Chain K, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|L Chain L, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|M Chain M, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|N Chain N, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|O Chain O, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|P Chain P, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
Length = 270
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 8/122 (6%)
Query: 13 VKGLIQQFDGIIYLTARDASRGQEALEKLQK-----LDILDKNSIKALHDHLEAEHGGVD 67
V+ + ++ + +D S G+ ++L D+ ++ +K L G +D
Sbjct: 26 VRAFVNSGARVV-ICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLD 84
Query: 68 VLVNNAAIAFKVNSSEPFGSQALHT-MRTNYFALIDVCDILFPLLR-SHGRVVNVSSSCG 125
+VNNA E +Q + N + + P LR S G V+N+SS G
Sbjct: 85 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG 144
Query: 126 HL 127
+
Sbjct: 145 AI 146
>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|B Chain B, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|C Chain C, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|D Chain D, Carbonyl Reductase Complexed With Nadph And 2-Propanol
Length = 244
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 60/147 (40%), Gaps = 35/147 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQK---------LDILDKNS 51
VTGA KGIG VK L ++ +T R L L K +D+ D
Sbjct: 12 VTGAGKGIGRDTVKALHASGAKVVAVT-----RTNSDLVSLAKECPGIEPVCVDLGD--- 63
Query: 52 IKALHDHLEAEHGG---VDVLVNNAAIAFKVNSSEPF---GSQAL-HTMRTNYFALIDVC 104
D E GG VD+LVNNAA+ +PF +A + N ++ V
Sbjct: 64 ----WDATEKALGGIGPVDLLVNNAALVIM----QPFLEVTKEAFDRSFSVNLRSVFQVS 115
Query: 105 DILFPLLRSH---GRVVNVSSSCGHLC 128
++ + + G +VNVSS H+
Sbjct: 116 QMVARDMINRGVPGSIVNVSSMVAHVT 142
>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|B Chain B, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|C Chain C, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|D Chain D, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
Length = 254
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 13/137 (9%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQ---------KLDILDKNS 51
VTGA GIG I K D I+ R + +++L+ K D+ K
Sbjct: 12 VTGAGSGIGRAIAKKFALN-DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKD 70
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQAL-HTMRTNYFALIDVCDILFPL 110
++ + +DVL NNA I V + + N ++ + P+
Sbjct: 71 VEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPI 130
Query: 111 LRSHGR--VVNVSSSCG 125
+ G+ +VN +S G
Sbjct: 131 MLKQGKGVIVNTASIAG 147
>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|B Chain B, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|C Chain C, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|D Chain D, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
Length = 294
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 54/137 (39%), Gaps = 19/137 (13%)
Query: 1 VTGANKGIGYGIVKGLIQQFD--GIIYLTAR--DASRGQEALEK------LQKLDILDKN 50
VTG + GIG ++ I YL A DA + + +E+ L D+ D++
Sbjct: 54 VTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDES 113
Query: 51 SIKALHDHLEAEHGGVDVLV-----NNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCD 105
++L GG+D+L A K +SE F T N FAL +
Sbjct: 114 FARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQF----QQTFAVNVFALFWITQ 169
Query: 106 ILFPLLRSHGRVVNVSS 122
PLL ++ SS
Sbjct: 170 EAIPLLPKGASIITTSS 186
>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|B Chain B, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|E Chain E, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|F Chain F, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
Length = 261
Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 96/234 (41%), Gaps = 60/234 (25%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
+TG++ G+G + + ++ LE+++K+ D+ ++
Sbjct: 12 ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESD 71
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
+ L E G +DV++NNA + V+S H M L
Sbjct: 72 VINLVQSAIKEFGKLDVMINNAGLENPVSS---------HEMS----------------L 106
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK-SVEELSALMNEFVELAQDGSHTKGGW 170
+V++ + + L + EA+K + ++IK +V +S++ H K W
Sbjct: 107 SDWNKVIDTNLTGAFLG--SREAIKYFVENDIKGTVINMSSV------------HEKIPW 152
Query: 171 PNSA-YAATKLG---VTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
P YAA+K G +TK L++A IR VN + PG +NT +++ K
Sbjct: 153 PLFVHYAASKGGMKLMTKTLALEYA---PKGIR----VNNIGPGAINTPINAEK 199
>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
pdb|3V2H|B Chain B, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
Length = 281
Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 54/147 (36%), Gaps = 32/147 (21%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIY---------LTARDASRGQEALEKLQ-KLDILDKN 50
+TG+ GIG I + L + I+ T D G + L D +
Sbjct: 30 ITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADXTKPS 89
Query: 51 SIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFG------------SQALHTMRTNYF 98
I + GG D+LVNNA + F V E F S + HT+R
Sbjct: 90 EIADXXAXVADRFGGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLSSSFHTIR---- 144
Query: 99 ALIDVCDILFPLLRSHGRVVNVSSSCG 125
I + GR++N++S+ G
Sbjct: 145 -----GAIPPXKKKGWGRIINIASAHG 166
>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase
Type1, Complexed With Nad+
Length = 267
Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 175 YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNT 214
Y A+K G+ + F + A L+ + + + +N + PG+VNT
Sbjct: 153 YCASKHGI--VGFTRSAALAANLMNSGVRLNAICPGFVNT 190
>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|B Chain B, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|E Chain E, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|F Chain F, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
Length = 261
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 94/231 (40%), Gaps = 54/231 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
+TG++ G+G + + ++ LE+++K+ D+ ++
Sbjct: 12 ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESD 71
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
+ L E G +DV++NNA + V+S H M L
Sbjct: 72 VINLVQSAIKEFGKLDVMINNAGLENPVSS---------HEMS----------------L 106
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK-SVEELSALMNEFVELAQDGSHTKGGW 170
+V++ + + L + EA+K + ++IK +V +S++ H K W
Sbjct: 107 SDWNKVIDTNLTGAFLG--SREAIKYFVENDIKGTVINMSSV------------HEKIPW 152
Query: 171 PNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
P YAA+K G+ L L+ + + + VN + PG +NT +++ K
Sbjct: 153 PLFVHYAASKGGMK----LMTETLALEYAPKGIRVNNIGPGAINTPINAEK 199
>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
Length = 261
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 94/231 (40%), Gaps = 54/231 (23%)
Query: 1 VTGANKGIGYGIVKGLIQQFDGIIYLTARDASRGQEALEKLQKL---------DILDKNS 51
+TG++ G+G + + ++ LE+++K+ D+ ++
Sbjct: 12 ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESD 71
Query: 52 IKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDVCDILFPLL 111
+ L E G +DV++NNA + V+S H M L
Sbjct: 72 VINLVQSAIKEFGKLDVMINNAGLENPVSS---------HEMS----------------L 106
Query: 112 RSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIK-SVEELSALMNEFVELAQDGSHTKGGW 170
+V++ + + L + EA+K + ++IK +V +S++ H K W
Sbjct: 107 SDWNKVIDTNLTGAFLG--SREAIKYFVENDIKGTVINMSSV------------HEKIPW 152
Query: 171 PNSA-YAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMSSGK 220
P YAA+K G+ L L+ + + + VN + PG +NT +++ K
Sbjct: 153 PLFVHYAASKGGMK----LMTETLALEYAPKGIRVNNIGPGAINTPINAEK 199
>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|B Chain B, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|C Chain C, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|D Chain D, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
Length = 257
Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 24 IYLTARDASRGQEALEKLQKL---------DILDKNSIKALHDHLEAEHGGVDVLVNNAA 74
+ +T R + +EA ++++ D+ + + I+ + ++ + G +D+L+NNAA
Sbjct: 33 VVITGRTKEKLEEAKLEIEQFPGQILTVQXDVRNTDDIQKXIEQIDEKFGRIDILINNAA 92
Query: 75 IAF 77
F
Sbjct: 93 GNF 95
>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 26.9 bits (58), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 67/175 (38%), Gaps = 44/175 (25%)
Query: 44 LDILDKNSIKALHDHLEAEHGGVDVLVNNAAIAFKVNSSEPFGSQALHTMRTNYFALIDV 103
LD+ KA D GG+ VLVNNA I + + E + AL T + ++DV
Sbjct: 60 LDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGI-LNIGTIEDY---AL----TEWQRILDV 111
Query: 104 -CDILFPLLRSHGRVVNVSSSCGHLCHVTSEALKKKLLHEIKSVEELSALMNEFVELAQD 162
+F +R+ + EA + +++ I S+E L+ +
Sbjct: 112 NLTGVFLGIRA-------------VVKPXKEAGRGSIIN-ISSIEGLAGTV--------- 148
Query: 163 GSHTKGGWPNSAYAATKLGVTKLSFLQHALLSQDAIREDLVVNCVHPGYVNTDMS 217
H Y ATK V L+ L IR VN +HPG V T +
Sbjct: 149 ACH--------GYTATKFAVRGLTKSTALELGPSGIR----VNSIHPGLVKTPXT 191
>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
pdb|3E03|B Chain B, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
pdb|3E03|C Chain C, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
Length = 274
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 43 KLDILDKNSIKALHDHLEAEHGGVDVLVNNAA 74
K DI +++ ++A GG+D+LVNNA+
Sbjct: 68 KCDIREEDQVRAAVAATVDTFGGIDILVNNAS 99
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,658,874
Number of Sequences: 62578
Number of extensions: 247101
Number of successful extensions: 1093
Number of sequences better than 100.0: 190
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 885
Number of HSP's gapped (non-prelim): 241
length of query: 230
length of database: 14,973,337
effective HSP length: 96
effective length of query: 134
effective length of database: 8,965,849
effective search space: 1201423766
effective search space used: 1201423766
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)