Query psy7998
Match_columns 142
No_of_seqs 134 out of 1250
Neff 10.5
Searched_HMMs 46136
Date Sat Aug 17 00:10:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7998.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7998hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02395 glutathione S-transfe 100.0 2.8E-28 6.1E-33 162.4 13.7 141 1-142 47-197 (215)
2 PRK09481 sspA stringent starva 100.0 2.6E-28 5.7E-33 162.2 13.5 134 1-142 53-189 (211)
3 PRK10542 glutathionine S-trans 100.0 3.6E-28 7.7E-33 160.4 12.1 136 1-142 46-184 (201)
4 PLN02473 glutathione S-transfe 100.0 1.3E-27 2.8E-32 159.2 14.2 141 1-142 48-198 (214)
5 TIGR01262 maiA maleylacetoacet 100.0 4.8E-27 1E-31 156.0 14.5 139 1-142 46-191 (210)
6 PRK13972 GSH-dependent disulfi 100.0 2.4E-27 5.2E-32 158.0 12.1 137 1-142 46-192 (215)
7 COG0625 Gst Glutathione S-tran 99.9 1.1E-26 2.4E-31 154.4 13.6 138 1-142 45-191 (211)
8 KOG0868|consensus 99.9 4.6E-26 1E-30 142.4 11.6 138 1-141 52-193 (217)
9 PRK15113 glutathione S-transfe 99.9 9.6E-26 2.1E-30 150.2 13.9 137 1-142 53-195 (214)
10 PRK10357 putative glutathione 99.9 1.3E-25 2.9E-30 148.3 12.8 139 1-142 43-187 (202)
11 PRK11752 putative S-transferas 99.9 2.9E-25 6.3E-30 151.9 14.0 137 1-142 95-245 (264)
12 KOG0406|consensus 99.9 2.5E-25 5.5E-30 146.3 11.4 136 2-142 53-198 (231)
13 KOG0867|consensus 99.9 3.7E-25 8.1E-30 148.2 12.0 141 1-142 48-196 (226)
14 PTZ00057 glutathione s-transfe 99.9 1E-24 2.3E-29 144.4 12.2 131 1-142 53-186 (205)
15 TIGR00862 O-ClC intracellular 99.9 6.3E-23 1.4E-27 137.5 13.0 129 1-142 53-207 (236)
16 PLN02378 glutathione S-transfe 99.9 1E-22 2.2E-27 135.6 11.0 125 1-142 54-186 (213)
17 KOG1695|consensus 99.9 4.6E-22 1E-26 130.0 11.7 136 2-142 47-187 (206)
18 PRK10387 glutaredoxin 2; Provi 99.9 2.3E-22 5.1E-27 133.5 10.2 135 1-142 42-200 (210)
19 PLN02817 glutathione dehydroge 99.9 1.2E-21 2.7E-26 133.7 12.1 125 1-142 107-238 (265)
20 TIGR02182 GRXB Glutaredoxin, G 99.9 2.5E-21 5.3E-26 128.6 8.7 134 1-142 41-199 (209)
21 PLN02907 glutamate-tRNA ligase 99.9 1.1E-20 2.4E-25 143.1 12.7 117 2-142 33-153 (722)
22 KOG4420|consensus 99.7 3.2E-17 6.8E-22 108.6 10.0 140 1-142 72-274 (325)
23 cd03189 GST_C_GTT1_like GST_C 99.7 8.5E-16 1.8E-20 93.4 9.0 102 40-142 2-114 (119)
24 cd03177 GST_C_Delta_Epsilon GS 99.6 2.5E-15 5.4E-20 91.3 8.9 97 45-142 2-99 (118)
25 cd03196 GST_C_5 GST_C family, 99.6 3.3E-15 7.2E-20 90.4 9.0 100 41-142 2-104 (115)
26 cd03188 GST_C_Beta GST_C famil 99.6 1.5E-15 3.2E-20 91.5 7.4 97 45-142 2-103 (114)
27 cd03182 GST_C_GTT2_like GST_C 99.6 4.9E-15 1.1E-19 89.7 8.5 100 42-142 1-110 (117)
28 cd03180 GST_C_2 GST_C family, 99.6 1E-14 2.3E-19 87.3 8.6 97 45-142 2-103 (110)
29 cd03179 GST_C_1 GST_C family, 99.6 2.4E-15 5.2E-20 89.4 5.7 97 45-142 2-103 (105)
30 cd03191 GST_C_Zeta GST_C famil 99.6 8.9E-15 1.9E-19 89.2 8.0 98 44-142 2-106 (121)
31 cd03200 GST_C_JTV1 GST_C famil 99.6 5E-15 1.1E-19 86.8 6.5 91 24-142 1-92 (96)
32 cd03186 GST_C_SspA GST_N famil 99.6 1.2E-14 2.6E-19 86.7 8.1 93 44-142 2-96 (107)
33 KOG1422|consensus 99.6 5.1E-14 1.1E-18 90.8 10.5 128 1-141 55-191 (221)
34 cd03178 GST_C_Ure2p_like GST_C 99.6 1.1E-14 2.3E-19 87.7 6.6 96 46-142 2-101 (113)
35 cd03187 GST_C_Phi GST_C family 99.6 3.4E-14 7.4E-19 86.1 8.1 98 45-142 2-107 (118)
36 PF13410 GST_C_2: Glutathione 99.6 1E-14 2.2E-19 80.4 5.3 64 79-142 3-69 (69)
37 KOG3027|consensus 99.5 1.6E-13 3.5E-18 88.3 10.5 138 1-142 62-244 (257)
38 KOG4244|consensus 99.5 1.5E-13 3.3E-18 91.5 9.6 137 2-142 89-269 (281)
39 cd03185 GST_C_Tau GST_C family 99.5 7.1E-14 1.5E-18 85.7 7.4 94 44-142 2-102 (126)
40 cd03190 GST_C_ECM4_like GST_C 99.5 9.2E-14 2E-18 87.0 7.7 94 45-142 4-105 (142)
41 cd03192 GST_C_Sigma_like GST_C 99.5 7.9E-14 1.7E-18 82.8 6.4 97 45-142 2-103 (104)
42 PF00043 GST_C: Glutathione S- 99.5 9.8E-14 2.1E-18 81.0 6.2 64 79-142 25-90 (95)
43 cd00299 GST_C_family Glutathio 99.5 7.1E-14 1.5E-18 82.0 5.5 93 50-142 2-99 (100)
44 cd03181 GST_C_EFB1gamma GST_C 99.5 1.9E-13 4.2E-18 83.4 7.4 97 46-142 2-103 (123)
45 cd03206 GST_C_7 GST_C family, 99.5 1.5E-13 3.3E-18 81.0 6.2 91 50-142 2-93 (100)
46 cd03183 GST_C_Theta GST_C fami 99.5 2.4E-13 5.3E-18 83.4 7.1 96 46-142 2-107 (126)
47 cd03209 GST_C_Mu GST_C family, 99.5 3.8E-13 8.2E-18 82.1 7.3 94 45-142 2-96 (121)
48 cd03184 GST_C_Omega GST_C fami 99.5 5.4E-13 1.2E-17 81.7 7.9 91 45-142 2-100 (124)
49 PF14497 GST_C_3: Glutathione 99.4 2.2E-13 4.8E-18 80.2 4.5 63 78-142 31-96 (99)
50 cd03202 GST_C_etherase_LigE GS 99.4 9.9E-13 2.2E-17 80.5 6.9 63 80-142 56-120 (124)
51 cd03207 GST_C_8 GST_C family, 99.4 6.1E-13 1.3E-17 78.8 5.6 87 51-142 3-89 (103)
52 cd03208 GST_C_Alpha GST_C fami 99.4 1.4E-12 3E-17 81.2 7.0 59 84-142 41-102 (137)
53 cd03210 GST_C_Pi GST_C family, 99.4 2.6E-12 5.6E-17 78.9 7.5 93 45-142 3-99 (126)
54 cd03198 GST_C_CLIC GST_C famil 99.4 4.6E-12 9.9E-17 78.1 7.9 66 77-142 24-111 (134)
55 cd03204 GST_C_GDAP1 GST_C fami 99.4 4.1E-12 8.8E-17 76.0 6.7 67 75-142 22-104 (111)
56 cd03193 GST_C_Metaxin GST_C fa 99.3 4.7E-12 1E-16 72.9 6.0 62 81-142 18-86 (88)
57 cd03195 GST_C_4 GST_C family, 99.3 1.2E-11 2.7E-16 74.6 8.0 95 44-142 2-100 (114)
58 cd03203 GST_C_Lambda GST_C fam 99.3 4.1E-11 9E-16 73.0 9.0 88 42-142 1-98 (120)
59 COG0435 ECM4 Predicted glutath 99.3 8.4E-12 1.8E-16 83.8 5.3 130 5-141 128-272 (324)
60 cd03211 GST_C_Metaxin2 GST_C f 99.2 1.8E-11 3.9E-16 75.1 4.8 64 79-142 54-124 (126)
61 KOG2903|consensus 99.2 6.7E-12 1.4E-16 83.6 2.9 131 4-141 121-273 (319)
62 cd03205 GST_C_6 GST_C family, 99.2 1.2E-10 2.6E-15 68.4 6.8 63 77-142 32-97 (98)
63 cd03197 GST_C_mPGES2 GST_C fam 99.2 1.2E-10 2.6E-15 72.6 6.7 62 81-142 78-142 (149)
64 KOG3028|consensus 99.2 9.3E-10 2E-14 75.3 11.5 139 2-142 45-230 (313)
65 cd03201 GST_C_DHAR GST_C famil 99.2 1.5E-10 3.3E-15 70.5 6.5 62 81-142 29-97 (121)
66 cd03194 GST_C_3 GST_C family, 99.1 3.1E-10 6.8E-15 68.5 7.6 59 80-142 39-101 (114)
67 COG2999 GrxB Glutaredoxin 2 [P 99.1 8.7E-10 1.9E-14 69.8 7.7 134 4-141 45-199 (215)
68 cd03212 GST_C_Metaxin1_3 GST_C 99.1 3.9E-10 8.5E-15 70.1 5.8 63 80-142 62-131 (137)
69 PF13417 GST_N_3: Glutathione 99.1 2.1E-10 4.6E-15 64.1 3.9 33 1-33 41-73 (75)
70 KOG3029|consensus 99.0 1.5E-09 3.3E-14 73.4 8.1 59 83-141 289-350 (370)
71 cd03061 GST_N_CLIC GST_N famil 99.0 5.1E-10 1.1E-14 64.4 4.3 32 1-32 56-87 (91)
72 cd03046 GST_N_GTT1_like GST_N 99.0 5.3E-10 1.1E-14 62.5 4.3 32 1-32 45-76 (76)
73 cd03080 GST_N_Metaxin_like GST 99.0 5.2E-10 1.1E-14 62.5 4.1 32 1-32 44-75 (75)
74 cd03050 GST_N_Theta GST_N fami 99.0 5.3E-10 1.1E-14 62.6 4.0 31 1-31 46-76 (76)
75 cd03052 GST_N_GDAP1 GST_N fami 99.0 3.9E-10 8.4E-15 62.7 3.3 28 1-28 46-73 (73)
76 cd03057 GST_N_Beta GST_N famil 99.0 5.5E-10 1.2E-14 62.6 3.8 32 1-32 45-77 (77)
77 cd03075 GST_N_Mu GST_N family, 99.0 6.4E-10 1.4E-14 63.2 4.0 29 3-31 54-82 (82)
78 cd03076 GST_N_Pi GST_N family, 99.0 7E-10 1.5E-14 61.7 3.8 30 1-30 44-73 (73)
79 cd03048 GST_N_Ure2p_like GST_N 99.0 8.8E-10 1.9E-14 62.4 4.1 32 1-32 46-80 (81)
80 cd03077 GST_N_Alpha GST_N fami 99.0 1.2E-09 2.7E-14 61.6 4.6 31 2-32 47-77 (79)
81 cd03038 GST_N_etherase_LigE GS 98.9 1.1E-09 2.3E-14 62.6 3.5 32 1-32 52-84 (84)
82 cd03059 GST_N_SspA GST_N famil 98.9 1.7E-09 3.7E-14 59.9 4.1 31 1-31 43-73 (73)
83 cd03039 GST_N_Sigma_like GST_N 98.9 2.3E-09 5E-14 59.3 3.8 29 1-29 44-72 (72)
84 cd03053 GST_N_Phi GST_N family 98.9 2.4E-09 5.2E-14 59.8 3.8 30 1-30 47-76 (76)
85 PF13409 GST_N_2: Glutathione 98.9 2.2E-09 4.8E-14 59.2 3.5 30 1-30 40-70 (70)
86 PF02798 GST_N: Glutathione S- 98.9 3.3E-09 7.2E-14 59.4 4.2 29 1-29 46-76 (76)
87 cd03045 GST_N_Delta_Epsilon GS 98.9 2.9E-09 6.2E-14 59.2 3.7 29 1-29 46-74 (74)
88 cd03047 GST_N_2 GST_N family, 98.9 2.6E-09 5.6E-14 59.3 3.4 28 1-28 46-73 (73)
89 cd03058 GST_N_Tau GST_N family 98.8 4.3E-09 9.3E-14 58.5 3.8 31 1-31 43-74 (74)
90 cd03079 GST_N_Metaxin2 GST_N f 98.8 4.9E-09 1.1E-13 58.1 3.7 30 1-30 45-74 (74)
91 cd03041 GST_N_2GST_N GST_N fam 98.8 5.3E-09 1.2E-13 58.7 3.8 31 1-31 45-77 (77)
92 cd03043 GST_N_1 GST_N family, 98.8 6E-09 1.3E-13 57.9 3.5 28 1-28 46-73 (73)
93 cd03044 GST_N_EF1Bgamma GST_N 98.8 8.9E-09 1.9E-13 57.4 3.3 29 1-29 45-74 (75)
94 cd03042 GST_N_Zeta GST_N famil 98.7 1.1E-08 2.4E-13 56.6 3.3 28 1-28 46-73 (73)
95 cd03056 GST_N_4 GST_N family, 98.7 1.3E-08 2.9E-13 56.2 3.4 28 1-28 46-73 (73)
96 cd03054 GST_N_Metaxin GST_N fa 98.7 2.6E-08 5.7E-13 55.0 3.6 30 1-30 43-72 (72)
97 cd03060 GST_N_Omega_like GST_N 98.6 2.8E-08 6.1E-13 54.8 3.1 27 1-27 43-70 (71)
98 cd03040 GST_N_mPGES2 GST_N fam 98.6 4.6E-08 1E-12 54.7 3.7 31 2-32 43-77 (77)
99 cd03037 GST_N_GRX2 GST_N famil 98.6 4.8E-08 1E-12 53.8 3.1 29 1-29 42-71 (71)
100 cd03049 GST_N_3 GST_N family, 98.6 4.2E-08 9.1E-13 54.3 2.7 28 1-28 45-73 (73)
101 cd03051 GST_N_GTT2_like GST_N 98.6 5.7E-08 1.2E-12 53.7 2.9 28 1-28 46-74 (74)
102 cd00570 GST_N_family Glutathio 98.3 7.4E-07 1.6E-11 48.2 3.5 28 1-28 44-71 (71)
103 PF14834 GST_C_4: Glutathione 98.2 1.6E-05 3.6E-10 47.2 8.0 82 42-124 1-85 (117)
104 cd03078 GST_N_Metaxin1_like GS 98.2 2.6E-06 5.6E-11 47.2 3.7 29 2-30 44-72 (73)
105 KOG1147|consensus 97.9 1E-05 2.2E-10 59.8 2.8 104 13-141 44-150 (712)
106 PF04399 Glutaredoxin2_C: Glut 97.7 0.00021 4.6E-09 44.0 6.3 61 80-142 57-117 (132)
107 PF10568 Tom37: Outer mitochon 97.5 0.0002 4.3E-09 39.5 3.4 27 1-27 44-71 (72)
108 cd03199 GST_C_GRX2 GST_C famil 97.2 0.0022 4.8E-08 39.3 6.2 60 81-142 59-118 (128)
109 PF11801 Tom37_C: Tom37 C-term 95.6 0.038 8.3E-07 35.6 4.9 37 87-123 113-153 (168)
110 TIGR02190 GlrX-dom Glutaredoxi 94.6 0.049 1.1E-06 30.3 2.9 27 2-28 53-79 (79)
111 cd03029 GRX_hybridPRX5 Glutare 92.6 0.17 3.8E-06 27.4 2.9 26 3-28 47-72 (72)
112 TIGR02183 GRXA Glutaredoxin, G 88.0 1.2 2.5E-05 25.2 3.7 28 5-32 56-83 (86)
113 PRK10638 glutaredoxin 3; Provi 87.5 1.1 2.4E-05 25.0 3.3 27 2-28 48-74 (83)
114 TIGR02196 GlrX_YruB Glutaredox 86.4 1.2 2.6E-05 23.6 3.0 26 2-27 46-73 (74)
115 PRK11200 grxA glutaredoxin 1; 85.8 2 4.3E-05 24.0 3.8 28 5-32 57-84 (85)
116 cd02066 GRX_family Glutaredoxi 84.3 1.4 3E-05 23.1 2.7 25 2-26 46-70 (72)
117 cd02976 NrdH NrdH-redoxin (Nrd 82.0 1.4 3.1E-05 23.2 2.1 19 2-20 46-64 (73)
118 PF09635 MetRS-N: MetRS-N bind 81.3 1.4 3E-05 26.9 1.9 31 2-32 31-63 (122)
119 KOG1668|consensus 75.8 1.1 2.5E-05 30.3 0.5 49 88-140 10-58 (231)
120 TIGR02681 phage_pRha phage reg 75.4 4.4 9.4E-05 24.2 2.9 26 7-32 2-28 (108)
121 cd03419 GRX_GRXh_1_2_like Glut 61.8 15 0.00032 19.9 3.1 26 4-29 51-76 (82)
122 cd03418 GRX_GRXb_1_3_like Glut 61.2 16 0.00035 19.4 3.2 23 6-28 51-73 (75)
123 TIGR01764 excise DNA binding d 57.9 20 0.00044 17.0 3.4 25 4-28 24-48 (49)
124 cd03027 GRX_DEP Glutaredoxin ( 55.7 17 0.00036 19.5 2.6 23 2-24 47-69 (73)
125 TIGR02180 GRX_euk Glutaredoxin 54.3 25 0.00055 19.0 3.3 24 5-28 53-76 (84)
126 TIGR02181 GRX_bact Glutaredoxi 48.3 33 0.00073 18.5 3.1 26 4-29 47-72 (79)
127 PRK10329 glutaredoxin-like pro 47.0 25 0.00055 19.5 2.5 16 2-17 46-61 (81)
128 TIGR02200 GlrX_actino Glutared 43.9 15 0.00032 19.5 1.2 19 3-21 48-67 (77)
129 COG0695 GrxC Glutaredoxin and 43.0 46 0.00099 18.4 3.1 25 2-26 49-73 (80)
130 PF12622 NpwBP: mRNA biogenesi 40.8 16 0.00034 18.4 0.9 10 1-10 11-20 (48)
131 PF00392 GntR: Bacterial regul 40.5 40 0.00087 17.5 2.5 29 89-117 4-33 (64)
132 PF12728 HTH_17: Helix-turn-he 39.4 50 0.0011 16.1 3.6 27 4-30 24-50 (51)
133 PF09098 Dehyd-heme_bind: Quin 38.3 25 0.00054 22.7 1.7 15 18-32 54-68 (167)
134 cd03028 GRX_PICOT_like Glutare 34.4 81 0.0018 17.7 3.3 25 4-28 61-85 (90)
135 PF04564 U-box: U-box domain; 33.3 43 0.00094 18.1 2.0 24 6-30 15-38 (73)
136 PF03711 OKR_DC_1_C: Orn/Lys/A 29.7 31 0.00068 21.5 1.1 24 7-30 89-112 (136)
137 PHA02776 E7 protein; Provision 28.8 19 0.00041 21.3 0.0 13 104-116 1-13 (101)
138 PF12290 DUF3802: Protein of u 24.9 1.7E+02 0.0037 17.7 3.5 38 81-121 63-100 (113)
139 PF09849 DUF2076: Uncharacteri 24.8 2.5E+02 0.0054 19.6 7.1 65 21-98 7-71 (247)
140 PF13227 DUF4035: Protein of u 24.2 56 0.0012 16.8 1.2 13 106-118 30-42 (53)
141 cd08200 catalase_peroxidase_2 23.4 1.7E+02 0.0037 21.1 3.9 40 86-125 73-114 (297)
142 COG3646 Uncharacterized phage- 23.1 60 0.0013 21.1 1.5 23 10-32 7-29 (167)
143 TIGR02189 GlrX-like_plant Glut 22.6 1.7E+02 0.0036 16.9 3.4 22 4-25 59-80 (99)
144 PF15471 TMEM171: Transmembran 21.2 2E+02 0.0044 20.4 3.8 23 101-123 98-120 (319)
145 PF10990 DUF2809: Protein of u 20.9 82 0.0018 18.1 1.7 17 102-118 71-87 (91)
146 PHA03050 glutaredoxin; Provisi 20.6 1.7E+02 0.0036 17.3 3.0 22 4-25 67-88 (108)
147 PRK14476 nitrogenase molybdenu 20.3 3.9E+02 0.0084 20.4 5.5 12 22-33 247-258 (455)
No 1
>PLN02395 glutathione S-transferase
Probab=99.96 E-value=2.8e-28 Score=162.44 Aligned_cols=141 Identities=21% Similarity=0.403 Sum_probs=111.0
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcCCC-CCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhh-----h-
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYGMN-SSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMV-----Y- 73 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~- 73 (142)
+||.|+||+|+++|.+|+||.+|++||+++++.. +. ++|.++.+++++++|+.+....+.+.+........ .
T Consensus 47 ~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~-l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (215)
T PLN02395 47 LQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRSQGPD-LLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGF 125 (215)
T ss_pred hCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCCCCcC-cCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccC
Confidence 5999999999999999999999999999999743 35 89999999999999999888776655433221111 1
Q ss_pred cCcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCC---CccccHHHHHhHhC
Q psy7998 74 EGQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLP---EVESYWKIQAWIKR 142 (142)
Q Consensus 74 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~---~~~~~p~l~~~~~r 142 (142)
....+..+...+.+.+.++.||++|++++|++|+++|+||+++++++.++....+ .+..||+|.+|++|
T Consensus 126 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~ 197 (215)
T PLN02395 126 PADEKVIKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDD 197 (215)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHH
Confidence 1112233556778899999999999988999999999999999998887633222 36789999999975
No 2
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.96 E-value=2.6e-28 Score=162.22 Aligned_cols=134 Identities=18% Similarity=0.320 Sum_probs=107.2
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCcccch
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTIL 80 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (142)
+||+|+||+|+++|.+|+||.+|++||+++++ .+. ++|.++.+++.++.|+.+....+...... .....+...
T Consensus 53 ~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~-~~~-l~p~~~~~ra~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 125 (211)
T PRK09481 53 LNPYQSVPTLVDRELTLYESRIIMEYLDERFP-HPP-LMPVYPVARGESRLMMHRIEKDWYSLMNK-----IVNGSASEA 125 (211)
T ss_pred hCCCCCCCEEEECCEEeeCHHHHHHHHHHhCC-CCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHH-----HhcCCHHHH
Confidence 59999999999999999999999999999998 466 89988999999999988765443222111 111222334
Q ss_pred HHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCC-Cc--cccHHHHHhHhC
Q psy7998 81 EDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLP-EV--ESYWKIQAWIKR 142 (142)
Q Consensus 81 ~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~-~~--~~~p~l~~~~~r 142 (142)
+...+.+...+..+|++|++++|++|+++|+||+++++.+.++. ..+ +. ..||+|.+|++|
T Consensus 126 ~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~-~~~~~~~~~~~p~l~~w~~~ 189 (211)
T PRK09481 126 DAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLP-VLGIELSGPGAKELKGYMTR 189 (211)
T ss_pred HHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHH-hcCCCCCCCCChhHHHHHHH
Confidence 55677888999999999998999999999999999999998774 334 43 579999999975
No 3
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.96 E-value=3.6e-28 Score=160.40 Aligned_cols=136 Identities=22% Similarity=0.383 Sum_probs=107.6
Q ss_pred CCCCCCCCeee-eCCEEeeehHHHHHHHHhhcCCCCCCCC-cccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCccc
Q psy7998 1 MNPLKKVPVLN-DNGIYISDSHAILTYLTSQYGMNSSHLY-PRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTT 78 (142)
Q Consensus 1 ~nP~g~vP~L~-~~~~~l~es~~I~~yl~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (142)
+||.|+||+|+ +||.+|+||.+|++||+++++. +. +. |.++.+++++++|+.+..+.+.+.+...+.+ ...+.
T Consensus 46 ~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~-~~-l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 120 (201)
T PRK10542 46 INPKGQVPALLLDDGTLLTEGVAIMQYLADSVPD-RQ-LLAPVGSLSRYHTIEWLNYIATELHKGFTPLFRP---DTPEE 120 (201)
T ss_pred hCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcc-cc-cCCCCCcHHHHHHHHHHHHHHhhhhhhhhhccCC---CChHH
Confidence 69999999997 5889999999999999999984 44 55 6677889999999988876665544333221 11122
Q ss_pred chHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCC-CccccHHHHHhHhC
Q psy7998 79 ILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 79 ~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~-~~~~~p~l~~~~~r 142 (142)
......+.+.+.++.+|++|++++|++|+++|+||+++++.+.+.. ..+ +.+.||+|.+|++|
T Consensus 121 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~-~~~~~~~~~p~l~~w~~~ 184 (201)
T PRK10542 121 YKPTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAY-AVKLNLEGLEHIAAYMQR 184 (201)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhh-ccCCCcccchHHHHHHHH
Confidence 2345567899999999999998899999999999999999998873 345 67789999999875
No 4
>PLN02473 glutathione S-transferase
Probab=99.96 E-value=1.3e-27 Score=159.18 Aligned_cols=141 Identities=22% Similarity=0.392 Sum_probs=109.6
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcCCC-CCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhh-hhh---cC
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYGMN-SSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRP-MVY---EG 75 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~ 75 (142)
+||+|+||+|+++|.+|+||.+|++||+++++.. .+ +.|.++.+++++++|+.+..+.+.......... .+. ..
T Consensus 48 ~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~~~~-l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (214)
T PLN02473 48 RQPFGQVPAIEDGDLKLFESRAIARYYATKYADQGTD-LLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGE 126 (214)
T ss_pred hCCCCCCCeEEECCEEEEehHHHHHHHHHHcCCcCCC-CCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccC
Confidence 5999999999999999999999999999999743 35 889889999999999988877665433222111 111 11
Q ss_pred --cccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCC---CccccHHHHHhHhC
Q psy7998 76 --QTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLP---EVESYWKIQAWIKR 142 (142)
Q Consensus 76 --~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~---~~~~~p~l~~~~~r 142 (142)
.....+....++.+.++.+|++|++++|++|+++|+||+++++.+.++..... ..+.||+|.+|++|
T Consensus 127 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~ 198 (214)
T PLN02473 127 PCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNE 198 (214)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHH
Confidence 11233445678889999999999988999999999999999999987643322 26789999999975
No 5
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.95 E-value=4.8e-27 Score=155.99 Aligned_cols=139 Identities=23% Similarity=0.273 Sum_probs=108.0
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhh----hcCc
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMV----YEGQ 76 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 76 (142)
+||+|+||+|+++|.+|+||.+|++||+++++ ++. +.|.++.+++++++|+.+....+.+.......... ....
T Consensus 46 ~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~-~~~-l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (210)
T TIGR01262 46 LNPQGLVPTLDIDGEVLTQSLAIIEYLEETYP-DPP-LLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEE 123 (210)
T ss_pred cCCCCcCCEEEECCEEeecHHHHHHHHHHhCC-CCC-CCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCH
Confidence 59999999999999999999999999999997 456 89988999999999998887655543221111111 1111
Q ss_pred ccchHHHHHHHHHHHHHHHhhccC--CceeccCCccHHHHHHHHHHHHHhhhCC-CccccHHHHHhHhC
Q psy7998 77 TTILEDKKKIALEALDFVEGLLKQ--TEWVAGDKMTVADFSLVATVTSLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 77 ~~~~~~~~~~~~~~l~~le~~L~~--~~fl~G~~~s~aD~~~~~~l~~~~~~~~-~~~~~p~l~~~~~r 142 (142)
....+...+.+.+.|+.||++|++ ++|++|+++|+|||++++.+.++. ..+ ..+.||+|.+|++|
T Consensus 124 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~-~~~~~~~~~p~l~~~~~~ 191 (210)
T TIGR01262 124 EARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAE-RFGVDLTPYPTLRRIAAA 191 (210)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHH-HcCCCcccchHHHHHHHH
Confidence 212233456789999999999986 359999999999999999998874 445 67889999999975
No 6
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.95 E-value=2.4e-27 Score=158.04 Aligned_cols=137 Identities=21% Similarity=0.356 Sum_probs=104.9
Q ss_pred CCCCCCCCeeee-----CC--EEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhH-hhhh
Q psy7998 1 MNPLKKVPVLND-----NG--IYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANII-RPMV 72 (142)
Q Consensus 1 ~nP~g~vP~L~~-----~~--~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 72 (142)
+||.|+||+|++ || .+|+||.+|++||+++++ . +.|.++.++++++.|+.|..+.+.+.+.... ....
T Consensus 46 iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~~~~~---~-l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (215)
T PRK13972 46 ISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTG---L-FLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHA 121 (215)
T ss_pred hCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHHHhcC---C-CCCCCHHHHHHHHHHHHHHhhccCcceeeeeeeecc
Confidence 699999999986 45 479999999999999985 2 6777888999999999998877765442211 0000
Q ss_pred -hcCcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCC-CccccHHHHHhHhC
Q psy7998 73 -YEGQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 73 -~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~-~~~~~p~l~~~~~r 142 (142)
....+...+....++.+.+..||++|++++|++|+++|+|||++++.+..... .+ ..+.||+|.+|++|
T Consensus 122 ~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~-~~~~~~~~P~l~~w~~r 192 (215)
T PRK13972 122 APQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTR-QRIDLAMYPAVKNWHER 192 (215)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhh-cCCcchhCHHHHHHHHH
Confidence 01112233455677889999999999988999999999999999988754422 24 67889999999975
No 7
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.1e-26 Score=154.44 Aligned_cols=138 Identities=33% Similarity=0.525 Sum_probs=113.3
Q ss_pred CCCCCCCCeeeeCCE-EeeehHHHHHHHHhhcCCCCCCCCcccHH---HHHHHHHHHhhhccccchhhhHhHhhhhhcC-
Q psy7998 1 MNPLKKVPVLNDNGI-YISDSHAILTYLTSQYGMNSSHLYPRDLK---KRAIVDSRLHFDNGVLFPSLANIIRPMVYEG- 75 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~-~l~es~~I~~yl~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 75 (142)
+||.|+||+|++++. +|+||.+|++||+++++ .++ ++|.++. +++.+..|+.+....+.+.+....... ...
T Consensus 45 ~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~-~~~-l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 121 (211)
T COG0625 45 LNPLGKVPALVDDDGEVLTESGAILEYLAERYP-GPP-LLPADPLARRARALLLWWLFFAASDLHPVIGQRRRAL-LGSE 121 (211)
T ss_pred cCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCC-CCC-cCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhh-cccc
Confidence 699999999997665 89999999999999998 566 8887764 788888999988888887776655443 211
Q ss_pred ---cccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCC-CccccHHHHHhHhC
Q psy7998 76 ---QTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 76 ---~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~-~~~~~p~l~~~~~r 142 (142)
.....+...+.+...+..+|+.|++++|++|+++|+||+++++.+.++ ...+ ..+.||++.+|++|
T Consensus 122 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~-~~~~~~~~~~p~l~~w~~r 191 (211)
T COG0625 122 PELLEAALEAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRL-ALLGEELADYPALKAWYER 191 (211)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHh-hhcCcccccChHHHHHHHH
Confidence 123446677889999999999999999999999999999999999986 4434 56889999999975
No 8
>KOG0868|consensus
Probab=99.94 E-value=4.6e-26 Score=142.36 Aligned_cols=138 Identities=25% Similarity=0.359 Sum_probs=116.5
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCcc-cc
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQT-TI 79 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 79 (142)
+||.++||+|++||.+|+||.||++||++++| +++ |+|.++..|+.+++....+.+.+.+.....+......... ..
T Consensus 52 iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P-~pp-LLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~ 129 (217)
T KOG0868|consen 52 INPMEKVPTLVIDGLTLTESLAIIEYLEETYP-DPP-LLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYG 129 (217)
T ss_pred cCchhhCCeEEECCEEeehHHHHHHHHHhcCC-CCC-CCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchh
Confidence 69999999999999999999999999999999 788 9999999999999999999988887766655544443222 11
Q ss_pred hHHHHHHHHHHHHHHHhhccC--CceeccCCccHHHHHHHHHHHHHhhhCC-CccccHHHHHhHh
Q psy7998 80 LEDKKKIALEALDFVEGLLKQ--TEWVAGDKMTVADFSLVATVTSLATLLP-EVESYWKIQAWIK 141 (142)
Q Consensus 80 ~~~~~~~~~~~l~~le~~L~~--~~fl~G~~~s~aD~~~~~~l~~~~~~~~-~~~~~p~l~~~~~ 141 (142)
.......+.+.+..||+.|.. ++|.+||++|+||+++.+.++.+ ..+. +++.||.+.+..+
T Consensus 130 ~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA-~rf~vdl~PYPti~ri~e 193 (217)
T KOG0868|consen 130 DQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNA-NRFHVDLTPYPTITRINE 193 (217)
T ss_pred hHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhh-hhccccCCcCchHHHHHH
Confidence 345667789999999999974 58999999999999999999998 5556 8999998877543
No 9
>PRK15113 glutathione S-transferase; Provisional
Probab=99.94 E-value=9.6e-26 Score=150.22 Aligned_cols=137 Identities=22% Similarity=0.288 Sum_probs=104.0
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcCCCC--CCCCcccHHHHHHHHHHHhhhccccchhhhHhH-hhhhh-cCc
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYGMNS--SHLYPRDLKKRAIVDSRLHFDNGVLFPSLANII-RPMVY-EGQ 76 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~ 76 (142)
+||.|+||+|++||.+|+||.+|++||+++++... + ++|.++.+++++++|+.+..+.+........ ...+. ...
T Consensus 53 ~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~~-l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (214)
T PRK15113 53 YSLTRRVPTLQHDDFELSESSAIAEYLEERFAPPAWER-IYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKK 131 (214)
T ss_pred cCCCCCCCEEEECCEEEecHHHHHHHHHHHcCCCCccc-cCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCC
Confidence 69999999999999999999999999999997432 4 7899999999999999988766554321110 00111 112
Q ss_pred ccchHHHHHHHHHHHHHHHhhccC-CceeccCCccHHHHHHHHHHHHHhhhCC-CccccHHHHHhHhC
Q psy7998 77 TTILEDKKKIALEALDFVEGLLKQ-TEWVAGDKMTVADFSLVATVTSLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 77 ~~~~~~~~~~~~~~l~~le~~L~~-~~fl~G~~~s~aD~~~~~~l~~~~~~~~-~~~~~p~l~~~~~r 142 (142)
....+...+++.+.++.+|++|++ +.|++|+ +|+|||++++.+.++.. .+ ... |+|.+|++|
T Consensus 132 ~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~-~~~~~~--p~l~~~~~r 195 (214)
T PRK15113 132 APLSEAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVL-HGDEVP--ERLADYATF 195 (214)
T ss_pred CcccHHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHH-cCCCCC--HHHHHHHHH
Confidence 233456777899999999999975 4799995 99999999999987733 34 332 899999875
No 10
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.94 E-value=1.3e-25 Score=148.27 Aligned_cols=139 Identities=20% Similarity=0.236 Sum_probs=106.3
Q ss_pred CCCCCCCCeee-eCCEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcC--cc
Q psy7998 1 MNPLKKVPVLN-DNGIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEG--QT 77 (142)
Q Consensus 1 ~nP~g~vP~L~-~~~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 77 (142)
+||.|+||+|+ ++|.+|+||.+|++||+++++ .++ ++|.++.+++++++|..+..+.+............... .+
T Consensus 43 ~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~-~~~-l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (202)
T PRK10357 43 YNPLGKVPALVTEEGECWFDSPIIAEYIELLNV-APA-MLPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSE 120 (202)
T ss_pred cCCccCCCeEEeCCCCeeecHHHHHHHHHHhCC-CCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccH
Confidence 59999999997 678999999999999999986 466 99999889999999988776655443322221111111 12
Q ss_pred cchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhh-CC--CccccHHHHHhHhC
Q psy7998 78 TILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATL-LP--EVESYWKIQAWIKR 142 (142)
Q Consensus 78 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~-~~--~~~~~p~l~~~~~r 142 (142)
...+...+++...|+.||++|++++ ++|+++|+||+++++.+.++... .. ....||+|.+|++|
T Consensus 121 ~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~ 187 (202)
T PRK10357 121 DELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVEN 187 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhcccCcchhhcChHHHHHHHH
Confidence 2234566789999999999998778 99999999999999999877432 12 25779999999975
No 11
>PRK11752 putative S-transferase; Provisional
Probab=99.93 E-value=2.9e-25 Score=151.94 Aligned_cols=137 Identities=29% Similarity=0.436 Sum_probs=103.0
Q ss_pred CCCCCCCCeeeeC----CEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhh--c
Q psy7998 1 MNPLKKVPVLNDN----GIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVY--E 74 (142)
Q Consensus 1 ~nP~g~vP~L~~~----~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 74 (142)
+||.|+||+|+++ +.+|+||.+|++||+++++ + |.|.++.++++++.|+.+..+.+ ......+...+. .
T Consensus 95 iNP~GkVP~Lv~~dg~~~~~L~ES~AIl~YL~~~~~---~-L~P~~~~era~v~~wl~~~~~~~-~~~~~~~~~~~~~~~ 169 (264)
T PRK11752 95 INPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFG---A-FLPKDLAARTETLNWLFWQQGSA-PFLGGGFGHFYAYAP 169 (264)
T ss_pred hCCCCCCCEEEeCCCCCCeEEEcHHHHHHHHHHhcC---C-cCCCCHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHhCC
Confidence 6999999999874 3699999999999999986 3 88988999999999999876543 111111111111 1
Q ss_pred C-cccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhh----C-C--CccccHHHHHhHhC
Q psy7998 75 G-QTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATL----L-P--EVESYWKIQAWIKR 142 (142)
Q Consensus 75 ~-~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~----~-~--~~~~~p~l~~~~~r 142 (142)
. .....+....++.+.|+.||++|++++|++|+++|+|||++++++.++... . . +.+.||+|.+|++|
T Consensus 170 ~~~~~~~~~~~~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~r 245 (264)
T PRK11752 170 EKIEYAINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKE 245 (264)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHH
Confidence 1 122234556678899999999999889999999999999999988766321 1 1 36789999999975
No 12
>KOG0406|consensus
Probab=99.93 E-value=2.5e-25 Score=146.29 Aligned_cols=136 Identities=24% Similarity=0.297 Sum_probs=112.5
Q ss_pred C-CCCCCCeeeeCCEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCcccch
Q psy7998 2 N-PLKKVPVLNDNGIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTIL 80 (142)
Q Consensus 2 n-P~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (142)
| |.++||||+++|..|+||..|++||+++++++++ ++|+|+.+|++++.|.++++..+......+.. ....+..
T Consensus 53 np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~~~-iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~----~~~~e~~ 127 (231)
T KOG0406|consen 53 NPVHKKVPVLEHNGKPICESLIIVEYIDETWPSGPP-ILPSDPYERAQARFWAEYIDKKVFFVGRFVVA----AKGGEEQ 127 (231)
T ss_pred ccccccCCEEEECCceehhhHHHHHHHHhhccCCCC-CCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHh----hcCchHH
Confidence 6 8999999999999999999999999999997688 99999999999999999998766444333321 1223445
Q ss_pred HHHHHHHHHHHHHHHhhcc-CCceeccCCccHHHHHHHHHHHHHhhh----CC----CccccHHHHHhHhC
Q psy7998 81 EDKKKIALEALDFVEGLLK-QTEWVAGDKMTVADFSLVATVTSLATL----LP----EVESYWKIQAWIKR 142 (142)
Q Consensus 81 ~~~~~~~~~~l~~le~~L~-~~~fl~G~~~s~aD~~~~~~l~~~~~~----~~----~~~~~p~l~~~~~r 142 (142)
+...+++...|..||+.|. +++|+.|+++++.|+++++++.++... .+ ..+.+|+|.+|.+|
T Consensus 128 ~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~ 198 (231)
T KOG0406|consen 128 EAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKR 198 (231)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHH
Confidence 7778899999999999998 779999999999999999777766332 22 36779999999875
No 13
>KOG0867|consensus
Probab=99.93 E-value=3.7e-25 Score=148.15 Aligned_cols=141 Identities=42% Similarity=0.703 Sum_probs=118.9
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcC-CCCCCCCcccHHHHHHHHHHHhhhccccchhh--hHhHhh-hhhcC-
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYG-MNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSL--ANIIRP-MVYEG- 75 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~- 75 (142)
+||.|+||+|+++|..++||.+|+.||.++|. .+.. ++|.+..+++.+++|+.+.++.+.+.. ..++.+ .....
T Consensus 48 ~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~~~~~-l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~ 126 (226)
T KOG0867|consen 48 LNPLGKVPALEDGGLTLWESHAILRYLAEKYGPLGGI-LLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPL 126 (226)
T ss_pred cCcCCCCCeEecCCeEEeeHHHHHHHHHHHcCCCCcc-cCCcCHHHHHHHHHHHHhhhcccccccccceeeecceecccC
Confidence 69999999999999999999999999999997 2344 899999999999999999998888773 344444 22222
Q ss_pred cccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHh-hhC-C-CccccHHHHHhHhC
Q psy7998 76 QTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLA-TLL-P-EVESYWKIQAWIKR 142 (142)
Q Consensus 76 ~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~-~~~-~-~~~~~p~l~~~~~r 142 (142)
+..........+...++.+|..|.++.|++|+++|+||+.+.+.+..+. ... . ...+||++.+|+++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~ 196 (226)
T KOG0867|consen 127 NPTAVKELEAKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYER 196 (226)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHH
Confidence 3455678899999999999999999999999999999999999999873 333 3 68999999999975
No 14
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.93 E-value=1e-24 Score=144.37 Aligned_cols=131 Identities=18% Similarity=0.274 Sum_probs=93.7
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCcccch
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTIL 80 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (142)
+||+|+||+|++||.+|+||.+|++||+++++ +.+.+..++..+........ .+...+ ....... +...
T Consensus 53 ~nP~g~vP~L~~~~~~l~eS~AI~~YLa~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~--~~~~ 121 (205)
T PTZ00057 53 DTPFEQVPILEMDNIIFAQSQAIVRYLSKKYK-----ICGESELNEFYADMIFCGVQ-DIHYKF---NNTNLFK--QNET 121 (205)
T ss_pred CCCCCCCCEEEECCEEEecHHHHHHHHHHHcC-----CCCCCHHHHHHHHHHHHHHH-HHHHHH---hhhHHHH--HHHH
Confidence 49999999999999999999999999999997 55555444444443332211 111111 1000000 1122
Q ss_pred HHHHHHHHHHHHHHHhhccCC--ceeccCCccHHHHHHHHHHHHHhhhCC-CccccHHHHHhHhC
Q psy7998 81 EDKKKIALEALDFVEGLLKQT--EWVAGDKMTVADFSLVATVTSLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 81 ~~~~~~~~~~l~~le~~L~~~--~fl~G~~~s~aD~~~~~~l~~~~~~~~-~~~~~p~l~~~~~r 142 (142)
+...+.+.+.+..||+.|+++ +|++|+++|+||+++++.+.++....+ +++.||+|.+|++|
T Consensus 122 ~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~~~~~l~~~P~l~~~~~r 186 (205)
T PTZ00057 122 TFLNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETKYPNSLKNFPLLKAHNEF 186 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHhChhhhccChhHHHHHHH
Confidence 445678899999999999754 799999999999999999988754446 78999999999875
No 15
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.90 E-value=6.3e-23 Score=137.54 Aligned_cols=129 Identities=17% Similarity=0.282 Sum_probs=93.4
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcCCC--CCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCccc
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYGMN--SSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTT 78 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (142)
+||.|+||||+++|.+|+||.+|++||+++++.+ +. +.|.++..+..... +...+..+. ....+.
T Consensus 53 inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~-l~p~~~~~~~~~~~--------l~~~~~~~~----~~~~~~ 119 (236)
T TIGR00862 53 LAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPK-LSPKHPESNTAGLD--------IFAKFSAYI----KNSNPE 119 (236)
T ss_pred HCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCC-CCCCCHHHHHHHHH--------HHHHHHHHH----HcCCHH
Confidence 5999999999999999999999999999999732 44 55555544332211 111111111 111122
Q ss_pred chHHHHHHHHHHHHHHHhhcc------------------CCceeccCCccHHHHHHHHHHHHHhhh----CC-C-ccccH
Q psy7998 79 ILEDKKKIALEALDFVEGLLK------------------QTEWVAGDKMTVADFSLVATVTSLATL----LP-E-VESYW 134 (142)
Q Consensus 79 ~~~~~~~~~~~~l~~le~~L~------------------~~~fl~G~~~s~aD~~~~~~l~~~~~~----~~-~-~~~~p 134 (142)
..+...+++.+.++.||++|. +++|+.|+++|+|||++++.+.++... .+ + .+.||
T Consensus 120 ~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~p 199 (236)
T TIGR00862 120 ANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIPAEFT 199 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCccccCc
Confidence 234455678899999999986 468999999999999999999988643 24 5 68899
Q ss_pred HHHHhHhC
Q psy7998 135 KIQAWIKR 142 (142)
Q Consensus 135 ~l~~~~~r 142 (142)
+|.+|++|
T Consensus 200 ~l~~w~~~ 207 (236)
T TIGR00862 200 GVWRYLSN 207 (236)
T ss_pred hHHHHHHH
Confidence 99999975
No 16
>PLN02378 glutathione S-transferase DHAR1
Probab=99.89 E-value=1e-22 Score=135.61 Aligned_cols=125 Identities=23% Similarity=0.411 Sum_probs=90.3
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCcccch
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTIL 80 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (142)
+||.|+||+|+++|.+|+||.+|++||+++++ ++. +. ++.+++.+...+. ..+..... ... ..
T Consensus 54 inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~-~~~-l~--~~~~~a~i~~~~~-------~~~~~~~~----~~~--~~ 116 (213)
T PLN02378 54 ISPQGKVPVLKIDDKWVTDSDVIVGILEEKYP-DPP-LK--TPAEFASVGSNIF-------GTFGTFLK----SKD--SN 116 (213)
T ss_pred hCCCCCCCEEEECCEEecCHHHHHHHHHHhCC-CCC-CC--CHHHHHHHHHHHH-------HHHHHHHh----cCC--hh
Confidence 69999999999999999999999999999998 344 53 4555665544321 11111111 111 11
Q ss_pred HHHHHHHHHHHHHHHhhcc--CCceeccCCccHHHHHHHHHHHHHhhh---C-C-C-ccccHHHHHhHhC
Q psy7998 81 EDKKKIALEALDFVEGLLK--QTEWVAGDKMTVADFSLVATVTSLATL---L-P-E-VESYWKIQAWIKR 142 (142)
Q Consensus 81 ~~~~~~~~~~l~~le~~L~--~~~fl~G~~~s~aD~~~~~~l~~~~~~---~-~-~-~~~~p~l~~~~~r 142 (142)
+...+.+.+.|..+|+.|+ +++|++|+++|+||+++++++.++... . . . .+.||+|.+|++|
T Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~ 186 (213)
T PLN02378 117 DGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKT 186 (213)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHH
Confidence 3345677888999999997 468999999999999999998875322 1 1 2 4779999999975
No 17
>KOG1695|consensus
Probab=99.89 E-value=4.6e-22 Score=129.96 Aligned_cols=136 Identities=24% Similarity=0.370 Sum_probs=103.9
Q ss_pred CCCCCCCeeeeCCEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCcccchH
Q psy7998 2 NPLKKVPVLNDNGIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTILE 81 (142)
Q Consensus 2 nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (142)
.|+|++|+|..||..|.||.+|++||+++|+ +.|.++.+.++++++.+...+.....+...+........+...+
T Consensus 47 ~pfgqlP~l~vDg~~i~QS~AI~RyLArk~g-----l~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~~~~~~~ 121 (206)
T KOG1695|consen 47 MPFGQLPVLEVDGKKLVQSRAILRYLARKFG-----LAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGKSEEELD 121 (206)
T ss_pred CCCCCCCEEeECCEeeccHHHHHHHHHHHhC-----cCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhccchhhhh
Confidence 4999999999999999999999999999999 99999999999999988766554433333332211111111111
Q ss_pred -HHHHHHHHHHHHHHhhcc--CCceeccCCccHHHHHHHHHHHHHhhhC-C-CccccHHHHHhHhC
Q psy7998 82 -DKKKIALEALDFVEGLLK--QTEWVAGDKMTVADFSLVATVTSLATLL-P-EVESYWKIQAWIKR 142 (142)
Q Consensus 82 -~~~~~~~~~l~~le~~L~--~~~fl~G~~~s~aD~~~~~~l~~~~~~~-~-~~~~~p~l~~~~~r 142 (142)
.........+..+++.|. +++|++||++|+||+.++..+..+.... + ....+|+|.++.+|
T Consensus 122 ~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~~~~~~~~~~P~L~a~~~k 187 (206)
T KOG1695|consen 122 KLYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEELLDPSALDHFPKLKAFKER 187 (206)
T ss_pred hhhccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHhcCchhhccChHHHHHHHH
Confidence 556678888999999887 4579999999999999999999886643 3 46677888777654
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.88 E-value=2.3e-22 Score=133.49 Aligned_cols=135 Identities=19% Similarity=0.228 Sum_probs=95.1
Q ss_pred CCCCCCCCee-eeCCEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhh--------
Q psy7998 1 MNPLKKVPVL-NDNGIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPM-------- 71 (142)
Q Consensus 1 ~nP~g~vP~L-~~~~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 71 (142)
+||.|+||+| +++|.+|+||.+|++||+++|+ ++. +.+. +++.+++|+.+....+...+...+...
T Consensus 42 ~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~-~~~-l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (210)
T PRK10387 42 MIGQKQVPILQKDDGSYMPESLDIVHYIDELDG-KPL-LTGK---RSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATP 116 (210)
T ss_pred hcCCcccceEEecCCeEecCHHHHHHHHHHhCC-Ccc-CCCc---ccHHHHHHHHHHHHHhhcchhcccccCCCcccCCH
Confidence 4899999999 5889999999999999999998 344 4322 466777777765443332221111000
Q ss_pred -----h------hcCc-c---cchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCCCccccHHH
Q psy7998 72 -----V------YEGQ-T---TILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLPEVESYWKI 136 (142)
Q Consensus 72 -----~------~~~~-~---~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~~~~~~p~l 136 (142)
+ .... + +......+.+.+.|+.+|++|++ +|++|+++|+||+++++++.++....+ ...+|+|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~~-~~~~p~l 194 (210)
T PRK10387 117 SARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVKG-IEWPPRV 194 (210)
T ss_pred HHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeecC-CCCCHHH
Confidence 0 0000 0 11135567899999999999986 999999999999999999998854322 2357999
Q ss_pred HHhHhC
Q psy7998 137 QAWIKR 142 (142)
Q Consensus 137 ~~~~~r 142 (142)
.+|++|
T Consensus 195 ~~w~~r 200 (210)
T PRK10387 195 ADYRDN 200 (210)
T ss_pred HHHHHH
Confidence 999986
No 19
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.88 E-value=1.2e-21 Score=133.74 Aligned_cols=125 Identities=21% Similarity=0.360 Sum_probs=91.4
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCcccch
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTIL 80 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (142)
+||.|+||+|+++|.+|+||.+|++||+++++ ++. +. ++.+++.++.++. ..+...+ ..... .
T Consensus 107 iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p-~~~-L~--~~~era~i~~~l~-------~~~~~~~----~~~~~--~ 169 (265)
T PLN02817 107 ISPEGKVPVVKLDEKWVADSDVITQALEEKYP-DPP-LA--TPPEKASVGSKIF-------STFIGFL----KSKDP--G 169 (265)
T ss_pred hCCCCCCCEEEECCEEEecHHHHHHHHHHHCC-CCC-CC--CHHHHHHHHHHHH-------HHHHHHh----ccCCc--c
Confidence 69999999999988999999999999999998 345 53 4566777766432 1111111 11111 1
Q ss_pred HHHHHHHHHHHHHHHhhccC-CceeccCCccHHHHHHHHHHHHHhhh----CC-C-ccccHHHHHhHhC
Q psy7998 81 EDKKKIALEALDFVEGLLKQ-TEWVAGDKMTVADFSLVATVTSLATL----LP-E-VESYWKIQAWIKR 142 (142)
Q Consensus 81 ~~~~~~~~~~l~~le~~L~~-~~fl~G~~~s~aD~~~~~~l~~~~~~----~~-~-~~~~p~l~~~~~r 142 (142)
+...+.+...+..||++|++ ++|++|+++|+|||++++.+.++... .+ + .+.||+|.+|++|
T Consensus 170 ~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~r 238 (265)
T PLN02817 170 DGTEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKN 238 (265)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHH
Confidence 22345677889999999974 69999999999999999999876432 12 2 4779999999975
No 20
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.86 E-value=2.5e-21 Score=128.58 Aligned_cols=134 Identities=16% Similarity=0.239 Sum_probs=90.3
Q ss_pred CCCCCCCCeee-eCCEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHh----h-----
Q psy7998 1 MNPLKKVPVLN-DNGIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIR----P----- 70 (142)
Q Consensus 1 ~nP~g~vP~L~-~~~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----- 70 (142)
+||.|+||+|+ +||.+++||.+|++||+++|+. +. +.+. .+..+++|+.+....+...+...+. +
T Consensus 41 ~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~-~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (209)
T TIGR02182 41 MIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGE-PL-LTGK---VSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFATQ 115 (209)
T ss_pred hcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCC-cc-CCCC---ChHHHHHHHHHHHHHhhhhhccccccCCCcccCCH
Confidence 58999999997 8899999999999999999973 33 4332 3445566665543333221111000 0
Q ss_pred ----hhhcCc----------ccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCCCccccH-H
Q psy7998 71 ----MVYEGQ----------TTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLPEVESYW-K 135 (142)
Q Consensus 71 ----~~~~~~----------~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~~~~~~p-~ 135 (142)
.+.... ........+.+.+.|+.+|++|++++|+.| ++|+||+++++.+.++....+ . .+| +
T Consensus 116 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~~-~-~~p~~ 192 (209)
T TIGR02182 116 SARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVAG-I-NWPSR 192 (209)
T ss_pred HHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeecC-C-CCChH
Confidence 000000 001135567889999999999999999854 799999999999988743322 1 256 9
Q ss_pred HHHhHhC
Q psy7998 136 IQAWIKR 142 (142)
Q Consensus 136 l~~~~~r 142 (142)
|.+|++|
T Consensus 193 l~~w~~R 199 (209)
T TIGR02182 193 VADYLDN 199 (209)
T ss_pred HHHHHHH
Confidence 9999986
No 21
>PLN02907 glutamate-tRNA ligase
Probab=99.85 E-value=1.1e-20 Score=143.11 Aligned_cols=117 Identities=17% Similarity=0.319 Sum_probs=96.3
Q ss_pred CCCCCCCeee-eCCEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCcccch
Q psy7998 2 NPLKKVPVLN-DNGIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTIL 80 (142)
Q Consensus 2 nP~g~vP~L~-~~~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (142)
||.|+||+|+ ++|.+|+||.+|++||++.++ ... |+|.++.+++++++|+.+......
T Consensus 33 ~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p-~~~-L~p~d~~erAqV~qWL~~~~~~~~------------------- 91 (722)
T PLN02907 33 LKSGSAPTLLFSSGEKLTGTNVLLRYIARSAS-LPG-FYGQDAFESSQVDEWLDYAPTFSS------------------- 91 (722)
T ss_pred CCCCCCcEEEECCCCEEECHHHHHHHHHHhCC-CcC-CCCCCHHHHHHHHHHHHHHhhccc-------------------
Confidence 7999999998 588999999999999999997 566 899999999999999987653210
Q ss_pred HHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHh-hhCC--CccccHHHHHhHhC
Q psy7998 81 EDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLA-TLLP--EVESYWKIQAWIKR 142 (142)
Q Consensus 81 ~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~-~~~~--~~~~~p~l~~~~~r 142 (142)
...+...++.||++|+.++|++|+++|+||+++++.+.... .... ..+.||+|.+|+++
T Consensus 92 ---~~~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~er 153 (722)
T PLN02907 92 ---GSEFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNS 153 (722)
T ss_pred ---HHHHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhhhhcccccccCHHHHHHHHH
Confidence 01356678999999999999999999999999999987652 2222 36789999999974
No 22
>KOG4420|consensus
Probab=99.74 E-value=3.2e-17 Score=108.57 Aligned_cols=140 Identities=30% Similarity=0.403 Sum_probs=91.4
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcCCCCCCCCcc-cHHHHHHHHH---HH------hhhcc-ccchhh-----
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYGMNSSHLYPR-DLKKRAIVDS---RL------HFDNG-VLFPSL----- 64 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~~~~l~~~-~~~~~~~~~~---~~------~~~~~-~~~~~~----- 64 (142)
+||.|.||||++|..+|.|+.-|++|++++|..+.. |.|. +..+..++.. .+ .|..+ .+++.+
T Consensus 72 lNp~gevPVl~~g~~II~d~tqIIdYvErtf~ger~-l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~ 150 (325)
T KOG4420|consen 72 LNPGGEVPVLIHGDNIISDYTQIIDYVERTFTGERV-LMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSM 150 (325)
T ss_pred cCCCCCCceEecCCeecccHHHHHHHHHHhhccccc-ccccccccccHHHHHHHHHHHhcCcchhhccccccchhhcccc
Confidence 599999999999999999999999999999986666 7773 2222222211 11 11111 122211
Q ss_pred ----hHhHhhhhh----------c-----------------------CcccchHHHHHHHHHHHHHHHhhccC----Cce
Q psy7998 65 ----ANIIRPMVY----------E-----------------------GQTTILEDKKKIALEALDFVEGLLKQ----TEW 103 (142)
Q Consensus 65 ----~~~~~~~~~----------~-----------------------~~~~~~~~~~~~~~~~l~~le~~L~~----~~f 103 (142)
..+...... . ++..........+...|..+|+.|.+ ..|
T Consensus 151 iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~w 230 (325)
T KOG4420|consen 151 IPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYLAKQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELW 230 (325)
T ss_pred CcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhcccccee
Confidence 111100000 0 00111234455677788888888887 479
Q ss_pred eccCCccHHHHHHHHHHHHHhhhCC------CccccHHHHHhHhC
Q psy7998 104 VAGDKMTVADFSLVATVTSLATLLP------EVESYWKIQAWIKR 142 (142)
Q Consensus 104 l~G~~~s~aD~~~~~~l~~~~~~~~------~~~~~p~l~~~~~r 142 (142)
+||+.+|+||+++...|+++... + ...+.|||..|++|
T Consensus 231 L~G~efslADVsLg~~LhRL~~L-g~e~~yw~~gsrpnle~Yf~r 274 (325)
T KOG4420|consen 231 LCGCEFSLADVSLGATLHRLKFL-GLEKKYWEDGSRPNLESYFER 274 (325)
T ss_pred eccccchHHHHHHHHHHHHHHHc-ccHHHhcccCCCccHHHHHHH
Confidence 99999999999999999998443 3 24578999999875
No 23
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.66 E-value=8.5e-16 Score=93.39 Aligned_cols=102 Identities=25% Similarity=0.319 Sum_probs=78.4
Q ss_pred cccHHHHHHHHHHHhhhccccchhhhHhHh-hhhhc---------CcccchHHHHHHHHHHHHHHHhhccCCceeccCCc
Q psy7998 40 PRDLKKRAIVDSRLHFDNGVLFPSLANIIR-PMVYE---------GQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKM 109 (142)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~ 109 (142)
|.++.+++++++|+.+.++.+.+.+..... ..... ......+....++.+.++.+|++|++++|++|+++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~ 81 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKL 81 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCC
Confidence 457889999999999999888877654322 22111 11222344567899999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhhhCC-CccccHHHHHhHhC
Q psy7998 110 TVADFSLVATVTSLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 110 s~aD~~~~~~l~~~~~~~~-~~~~~p~l~~~~~r 142 (142)
|+|||++++.+.++. ..+ ....||+|.+|++|
T Consensus 82 t~ADi~l~~~~~~~~-~~~~~~~~~p~l~~w~~~ 114 (119)
T cd03189 82 TAADIMMSFPLEAAL-ARGPLLEKYPNIAAYLER 114 (119)
T ss_pred CHHHHHHHHHHHHHH-HcCcccccCchHHHHHHH
Confidence 999999999988873 334 57889999999875
No 24
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.64 E-value=2.5e-15 Score=91.29 Aligned_cols=97 Identities=46% Similarity=0.829 Sum_probs=78.1
Q ss_pred HHHHHHHHHhhhccccchhhhHhHhhhhhcCcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHh
Q psy7998 45 KRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLA 124 (142)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~ 124 (142)
+++++++|+++..+.+.+.+...+.+.+... ....+...+++.+.++.+|+.|++++|++|+++|+||+++++.+.++.
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~ 80 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGG-AEPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLE 80 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHH
Confidence 5788899999998888877766655543322 234567788999999999999988899999999999999999999885
Q ss_pred hhCC-CccccHHHHHhHhC
Q psy7998 125 TLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 125 ~~~~-~~~~~p~l~~~~~r 142 (142)
...+ +...||+|.+|++|
T Consensus 81 ~~~~~~~~~~p~l~~w~~~ 99 (118)
T cd03177 81 ALLPLDLSKYPNVRAWLER 99 (118)
T ss_pred HhcCCChhhCchHHHHHHH
Confidence 4245 66789999999875
No 25
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.63 E-value=3.3e-15 Score=90.37 Aligned_cols=100 Identities=18% Similarity=0.221 Sum_probs=79.3
Q ss_pred ccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHH
Q psy7998 41 RDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATV 120 (142)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l 120 (142)
.++..++.+++|+.+..+.+.+.+........... +..+...+.+.+.++.+|++|++++|++|+++|+|||++++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l 79 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADRYPE--ESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFV 79 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhhcCc--ccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHH
Confidence 36778999999999999888877765544332222 2356778899999999999999999999999999999999988
Q ss_pred HHHhhhC--C-CccccHHHHHhHhC
Q psy7998 121 TSLATLL--P-EVESYWKIQAWIKR 142 (142)
Q Consensus 121 ~~~~~~~--~-~~~~~p~l~~~~~r 142 (142)
.++.... . ....||+|.+|++|
T Consensus 80 ~~~~~~~~~~~~~~~~P~L~~w~~r 104 (115)
T cd03196 80 RQFAHVDPKWFDQSPYPRLRRWLNG 104 (115)
T ss_pred HHHHHhhhcccCcccCHHHHHHHHH
Confidence 7664322 2 36889999999975
No 26
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.63 E-value=1.5e-15 Score=91.53 Aligned_cols=97 Identities=18% Similarity=0.300 Sum_probs=75.5
Q ss_pred HHHHHHHHHhhhccccchhhhHhHhhhhhcC----cccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHH
Q psy7998 45 KRAIVDSRLHFDNGVLFPSLANIIRPMVYEG----QTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATV 120 (142)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l 120 (142)
+++++++|+.|.++.+.+.+........... .+...+...+.+.+.++.+|+.|++++|++|+++|+|||++++.+
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~ 81 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVL 81 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHH
Confidence 4788999999998888877754443322111 122345567789999999999999889999999999999999999
Q ss_pred HHHhhhCC-CccccHHHHHhHhC
Q psy7998 121 TSLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 121 ~~~~~~~~-~~~~~p~l~~~~~r 142 (142)
.++ ...+ ..+.||+|.+|++|
T Consensus 82 ~~~-~~~~~~~~~~p~l~~w~~~ 103 (114)
T cd03188 82 RWA-PGVGLDLSDWPNLAAYLAR 103 (114)
T ss_pred HHH-hhcCCChhhChHHHHHHHH
Confidence 877 3345 67789999999875
No 27
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.62 E-value=4.9e-15 Score=89.74 Aligned_cols=100 Identities=19% Similarity=0.228 Sum_probs=76.6
Q ss_pred cHHHHHHHHHHHhhhccccchhhhHhHhhhhh--c------CcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHH
Q psy7998 42 DLKKRAIVDSRLHFDNGVLFPSLANIIRPMVY--E------GQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVAD 113 (142)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD 113 (142)
++.+++.+++|+.+..+.+.+.+...+..... . ..+...+....++.+.++.||++|++++|++|+++|+||
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aD 80 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIAD 80 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHH
Confidence 35689999999999887777665544432111 1 112334667788999999999999988999999999999
Q ss_pred HHHHHHHHHHhhhCC-C-ccccHHHHHhHhC
Q psy7998 114 FSLVATVTSLATLLP-E-VESYWKIQAWIKR 142 (142)
Q Consensus 114 ~~~~~~l~~~~~~~~-~-~~~~p~l~~~~~r 142 (142)
|++++.+.++.. .+ + ...||+|.+|++|
T Consensus 81 i~l~~~~~~~~~-~~~~~~~~~p~l~~w~~~ 110 (117)
T cd03182 81 ITAFVGLDFAKV-VKLRVPEELTHLRAWYDR 110 (117)
T ss_pred HHHHHHhHHHHh-cCCCCccccHHHHHHHHH
Confidence 999999998743 34 4 4689999999975
No 28
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.60 E-value=1e-14 Score=87.26 Aligned_cols=97 Identities=20% Similarity=0.325 Sum_probs=74.2
Q ss_pred HHHHHHHHHhhhccccchhhhHhHhhhhhcC----cccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHH
Q psy7998 45 KRAIVDSRLHFDNGVLFPSLANIIRPMVYEG----QTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATV 120 (142)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l 120 (142)
+++++++|+.+..+.+.+.+...+.+..... .+...+...+++.+.++.+|++|++++|++|+++|+||+++++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~ 81 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSA 81 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHH
Confidence 4788899999998888888765544332211 122334567789999999999999889999999999999999988
Q ss_pred HHHhhhCC-CccccHHHHHhHhC
Q psy7998 121 TSLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 121 ~~~~~~~~-~~~~~p~l~~~~~r 142 (142)
..... .+ ....||+|.+|++|
T Consensus 82 ~~~~~-~~~~~~~~p~l~~~~~~ 103 (110)
T cd03180 82 YRWFE-LPIERPPLPHLERWYAR 103 (110)
T ss_pred HHHHH-cccccccCchHHHHHHH
Confidence 64422 23 57889999999875
No 29
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.60 E-value=2.4e-15 Score=89.37 Aligned_cols=97 Identities=27% Similarity=0.333 Sum_probs=75.0
Q ss_pred HHHHHHHHHhhhccccchhhhHhHhhhh----hcCcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHH
Q psy7998 45 KRAIVDSRLHFDNGVLFPSLANIIRPMV----YEGQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATV 120 (142)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l 120 (142)
+++++++|+.+.++.+.+.+........ ....++..+...+++.+.++.||+.|++++|++|+++|+||+++++.+
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~ 81 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYT 81 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHH
Confidence 4788999999988888776654322211 112233456678889999999999998889999999999999999999
Q ss_pred HHHhhhCC-CccccHHHHHhHhC
Q psy7998 121 TSLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 121 ~~~~~~~~-~~~~~p~l~~~~~r 142 (142)
.++. ..+ +...+|+|.+|++|
T Consensus 82 ~~~~-~~~~~~~~~p~l~~~~~~ 103 (105)
T cd03179 82 HVAD-EGGFDLADYPAIRAWLAR 103 (105)
T ss_pred Hhcc-ccCCChHhCccHHHHHHh
Confidence 9873 335 67789999999975
No 30
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.59 E-value=8.9e-15 Score=89.19 Aligned_cols=98 Identities=21% Similarity=0.181 Sum_probs=72.3
Q ss_pred HHHHHHHHHHhhhccccchhhhHhHhhhhh-c-C--cccchHHHHHHHHHHHHHHHhhcc--CCceeccCCccHHHHHHH
Q psy7998 44 KKRAIVDSRLHFDNGVLFPSLANIIRPMVY-E-G--QTTILEDKKKIALEALDFVEGLLK--QTEWVAGDKMTVADFSLV 117 (142)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~--~~~~~~~~~~~~~~~l~~le~~L~--~~~fl~G~~~s~aD~~~~ 117 (142)
.+++.+++|+.+..+.+.+........... . . .+...+...+.+.+.|..+|++|+ +++|++|+++|+||++++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~ 81 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLV 81 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHH
Confidence 468999999999998888764333222211 1 1 112223345678999999999998 447999999999999999
Q ss_pred HHHHHHhhhCC-CccccHHHHHhHhC
Q psy7998 118 ATVTSLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 118 ~~l~~~~~~~~-~~~~~p~l~~~~~r 142 (142)
+.+.++.. .+ +...||+|.+|++|
T Consensus 82 ~~~~~~~~-~~~~~~~~p~l~~w~~~ 106 (121)
T cd03191 82 PQVYNARR-FGVDLSPYPTIARINEA 106 (121)
T ss_pred HHHHHHHH-hCCCcccCcHHHHHHHH
Confidence 99987643 35 67889999999975
No 31
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.59 E-value=5e-15 Score=86.76 Aligned_cols=91 Identities=21% Similarity=0.271 Sum_probs=71.1
Q ss_pred HHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCcccchHHHHHHHHHHHHHHHhhccCCce
Q psy7998 24 LTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTILEDKKKIALEALDFVEGLLKQTEW 103 (142)
Q Consensus 24 ~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~f 103 (142)
++||++..+ ++|.++.+...++.|++.....+. . ...+++.+.++.+|++|++++|
T Consensus 1 ~r~~~~~~~-----~~~~~~~~~~~vd~~~d~~~~~l~------------~-------~~~~~~~~~l~~le~~L~~~~f 56 (96)
T cd03200 1 ARFLYRLLG-----PAPNAPNAATNIDSWVDTAIFQLA------------E-------GSSKEKAAVLRALNSALGRSPW 56 (96)
T ss_pred CchHHHHhc-----ccCCCchHHHHHHHHHHHHHHHHh------------c-------CCHHHHHHHHHHHHHHHcCCCc
Confidence 478888743 899999999999999985432211 0 1234555788899999999999
Q ss_pred eccCCccHHHHHHHHHHHHHhhhCC-CccccHHHHHhHhC
Q psy7998 104 VAGDKMTVADFSLVATVTSLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 104 l~G~~~s~aD~~~~~~l~~~~~~~~-~~~~~p~l~~~~~r 142 (142)
++|+++|+|||++++.+.+. + ....||+|.+|++|
T Consensus 57 l~Gd~~tiADi~l~~~l~~~----~~~~~~~p~l~~w~~r 92 (96)
T cd03200 57 LVGSEFTVADIVSWCALLQT----GLASAAPANVQRWLKS 92 (96)
T ss_pred cCCCCCCHHHHHHHHHHHHc----ccccccChHHHHHHHH
Confidence 99999999999999988643 3 45789999999985
No 32
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.59 E-value=1.2e-14 Score=86.74 Aligned_cols=93 Identities=16% Similarity=0.202 Sum_probs=73.7
Q ss_pred HHHHHHHHHHhhhccccchhhhHhHhhhhhcCcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHH
Q psy7998 44 KKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSL 123 (142)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~ 123 (142)
.++++++.|+.++++.+.+.+.....+ .++..+...+.+.+.+..+|++|++++|++|+++|+|||++++.+.++
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~ 76 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIEKG-----RKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRL 76 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHH
Confidence 468999999999998877766544321 123345677889999999999999999999999999999999998765
Q ss_pred hhhCC-C-ccccHHHHHhHhC
Q psy7998 124 ATLLP-E-VESYWKIQAWIKR 142 (142)
Q Consensus 124 ~~~~~-~-~~~~p~l~~~~~r 142 (142)
...+ . ...+|+|.+|++|
T Consensus 77 -~~~~~~~~~~~p~l~~w~~~ 96 (107)
T cd03186 77 -PALGIELPKQAKPLKDYMER 96 (107)
T ss_pred -HHcCCCCcccchHHHHHHHH
Confidence 3344 3 3579999999875
No 33
>KOG1422|consensus
Probab=99.57 E-value=5.1e-14 Score=90.81 Aligned_cols=128 Identities=23% Similarity=0.341 Sum_probs=90.4
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCcccch
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTIL 80 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (142)
+.|.|++|+|..++..++||..|-++|+++++ ++. +.-..+.|.+.+-. .++..+..+ .....+...
T Consensus 55 ~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~-~p~-~~~~~~~E~asag~-------diF~kF~~f----i~ksk~~~n 121 (221)
T KOG1422|consen 55 ISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLP-PPK-LPTLAPPESASAGS-------DIFAKFSAF----IKKSKDAAN 121 (221)
T ss_pred hCCCCCCCeEEeCCceeccHHHHHHHHHHhcC-CCC-CcccCCHHHHhhHH-------HHHHHHHHH----HhCchhhcc
Confidence 47999999999999999999999999999998 343 32222333322211 111112111 122333344
Q ss_pred HHHHHHHHHHHHHHHhhccC---CceeccCCccHHHHHHHHHHHHHhhhCC-----C-ccccHHHHHhHh
Q psy7998 81 EDKKKIALEALDFVEGLLKQ---TEWVAGDKMTVADFSLVATVTSLATLLP-----E-VESYWKIQAWIK 141 (142)
Q Consensus 81 ~~~~~~~~~~l~~le~~L~~---~~fl~G~~~s~aD~~~~~~l~~~~~~~~-----~-~~~~p~l~~~~~ 141 (142)
+.....+...|..|+++|.. ++|+.|+++|+|||.+.+-|+-++...+ + .+..+.+.+|++
T Consensus 122 ~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~ 191 (221)
T KOG1422|consen 122 DGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLK 191 (221)
T ss_pred chHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHH
Confidence 56677888899999999985 6999999999999999999998855433 2 566788888875
No 34
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.57 E-value=1.1e-14 Score=87.73 Aligned_cols=96 Identities=21% Similarity=0.317 Sum_probs=74.8
Q ss_pred HHHHHHHHhhhccccchhhhHhHhhhhhc--CcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHH
Q psy7998 46 RAIVDSRLHFDNGVLFPSLANIIRPMVYE--GQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSL 123 (142)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~ 123 (142)
++++++|+.|.++.+.+.+.......... ..+...+....++...++.+|+.|++++|++|+++|+|||++++.+.+.
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~ 81 (113)
T cd03178 2 RYEVLQWLFFQMGGLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRL 81 (113)
T ss_pred hHHHHHHHHHHHccCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHH
Confidence 67889999999988888765443222111 1233445677889999999999999889999999999999999999987
Q ss_pred hhhCC-C-ccccHHHHHhHhC
Q psy7998 124 ATLLP-E-VESYWKIQAWIKR 142 (142)
Q Consensus 124 ~~~~~-~-~~~~p~l~~~~~r 142 (142)
... + . .+.||++.+|++|
T Consensus 82 ~~~-~~~~~~~~p~l~~w~~~ 101 (113)
T cd03178 82 EWI-GIDDLDDFPNVKRWLDR 101 (113)
T ss_pred Hhc-cccchhhchHHHHHHHH
Confidence 433 4 4 7789999999874
No 35
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.55 E-value=3.4e-14 Score=86.09 Aligned_cols=98 Identities=24% Similarity=0.387 Sum_probs=72.6
Q ss_pred HHHHHHHHHhhhccccchhhhHhHh-----hhhhc-CcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHH
Q psy7998 45 KRAIVDSRLHFDNGVLFPSLANIIR-----PMVYE-GQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVA 118 (142)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~ 118 (142)
+++++.+|+.+..+.+.+.+..... +.... ......+....++.+.++.||++|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~ 81 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLP 81 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHH
Confidence 4778889999988888776654322 11111 11223345677899999999999998899999999999999999
Q ss_pred HHHHHhhhC-C-CccccHHHHHhHhC
Q psy7998 119 TVTSLATLL-P-EVESYWKIQAWIKR 142 (142)
Q Consensus 119 ~l~~~~~~~-~-~~~~~p~l~~~~~r 142 (142)
++.++.... + ..+.+|+|.+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~p~l~~~~~~ 107 (118)
T cd03187 82 YLQYLMATPFAKLFDSRPHVKAWWED 107 (118)
T ss_pred HHHHHHHccchhhhhcCchHHHHHHH
Confidence 998874322 2 36789999999875
No 36
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.55 E-value=1e-14 Score=80.36 Aligned_cols=64 Identities=28% Similarity=0.460 Sum_probs=54.1
Q ss_pred chHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCC--C-ccccHHHHHhHhC
Q psy7998 79 ILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLP--E-VESYWKIQAWIKR 142 (142)
Q Consensus 79 ~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~--~-~~~~p~l~~~~~r 142 (142)
..++..+++.+.++.||++|++++|++|++||+||+++++++.++..... . .+.+|+|.+|++|
T Consensus 3 ~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 3 AVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 34677889999999999999999999999999999999999999855532 2 6889999999986
No 37
>KOG3027|consensus
Probab=99.54 E-value=1.6e-13 Score=88.27 Aligned_cols=138 Identities=15% Similarity=0.212 Sum_probs=102.2
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcCCCCCCCCc-ccHHHHHHHHHHHhhhccccchhhhHhH-----------
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYGMNSSHLYP-RDLKKRAIVDSRLHFDNGVLFPSLANII----------- 68 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 68 (142)
++|.|+||.|..|..+++|-.+|..++.++-. . |.+ .+..+++.++..++++++.+.-+-..+.
T Consensus 62 mSP~G~vPllr~g~~~~aef~pIV~fVeak~~---~-l~s~lsE~qkadmra~vslVen~~t~aEl~~s~~de~ty~~vT 137 (257)
T KOG3027|consen 62 MSPGGKVPLLRIGKTLFAEFEPIVDFVEAKGV---T-LTSWLSEDQKADMRAYVSLVENLLTTAELYVSWNDEETYDEVT 137 (257)
T ss_pred cCCCCCCceeeecchhhhhhhHHHHHHHHhcc---c-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHh
Confidence 58999999999999999999999999998743 2 332 4556788888888877765421111000
Q ss_pred ---h------------h---hhh--------cCcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHH
Q psy7998 69 ---R------------P---MVY--------EGQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTS 122 (142)
Q Consensus 69 ---~------------~---~~~--------~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~ 122 (142)
+ + ++. .-+....+...+++.+.++.|+.+|+.++||.|++||-+|..+|+.+..
T Consensus 138 ~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlyt 217 (257)
T KOG3027|consen 138 ALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYT 217 (257)
T ss_pred hhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHH
Confidence 0 0 000 1113345777889999999999999999999999999999999999998
Q ss_pred Hhhh-CC------CccccHHHHHhHhC
Q psy7998 123 LATL-LP------EVESYWKIQAWIKR 142 (142)
Q Consensus 123 ~~~~-~~------~~~~~p~l~~~~~r 142 (142)
+... .+ ..++|++|.+++.|
T Consensus 218 ilTt~Lpn~ela~~lkkys~Llefcrr 244 (257)
T KOG3027|consen 218 ILTTRLPNMELANILKKYSNLLEFCRR 244 (257)
T ss_pred hhhhcCCcHHHHHHHHHhHHHHHHHHH
Confidence 7543 23 27889999998875
No 38
>KOG4244|consensus
Probab=99.52 E-value=1.5e-13 Score=91.53 Aligned_cols=137 Identities=18% Similarity=0.266 Sum_probs=92.9
Q ss_pred CCCCCCCeeeeCCEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccc--------------------
Q psy7998 2 NPLKKVPVLNDNGIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLF-------------------- 61 (142)
Q Consensus 2 nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------------- 61 (142)
++.|++|.++.+|..+.||.-|..+|.++++-+.. |-+ .++++.++...++++.+.
T Consensus 89 Sr~G~lPFIELNGe~iaDS~~I~~~L~~hf~~~~~-L~~---e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~ 164 (281)
T KOG4244|consen 89 SRNGTLPFIELNGEHIADSDLIEDRLRKHFKIPDD-LSA---EQRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKL 164 (281)
T ss_pred ccCCCcceEEeCCeeccccHHHHHHHHHHcCCCCC-CCH---HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhc
Confidence 67899999999999999999999999999984433 333 234444333332221110
Q ss_pred --------hhhhHhH-hhhhhc--------C-cccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHH
Q psy7998 62 --------PSLANII-RPMVYE--------G-QTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSL 123 (142)
Q Consensus 62 --------~~~~~~~-~~~~~~--------~-~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~ 123 (142)
+.+...+ ...+.. . ..-..++..+.+.+.|+.++..|++++|+.|+++|-+|+.+|+.|..+
T Consensus 165 ~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~IG~f~~~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v 244 (281)
T KOG4244|consen 165 IGLPGFLFPLLLPLFWKAIFGKKVYKRSTGAIGDFESAEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQV 244 (281)
T ss_pred cCccccchHHHHHHHHHHHHHHHHHHHhhccccCcCHHHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhhe
Confidence 0111111 110100 0 011235577788999999999999999999999999999999999977
Q ss_pred hhhCC-C-----ccccHHHHHhHhC
Q psy7998 124 ATLLP-E-----VESYWKIQAWIKR 142 (142)
Q Consensus 124 ~~~~~-~-----~~~~p~l~~~~~r 142 (142)
..-+. . .+.+|||.+|++|
T Consensus 245 ~YP~~~~i~d~le~d~p~l~eYceR 269 (281)
T KOG4244|consen 245 YYPFRSHISDLLEGDFPNLLEYCER 269 (281)
T ss_pred eccCCCcHHHHHhhhchHHHHHHHH
Confidence 44222 1 5669999999986
No 39
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.52 E-value=7.1e-14 Score=85.69 Aligned_cols=94 Identities=24% Similarity=0.286 Sum_probs=73.5
Q ss_pred HHHHHHHHHHhhhccccchhhhHhHhhhhhcCcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHH
Q psy7998 44 KKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSL 123 (142)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~ 123 (142)
.+++++++|+.+.++.+.+.+...+.. . +...+.....+.+.++.+|++|++++|++|+++|+|||++++.+.++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~ 76 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLAA----K-GEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWF 76 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHcc----c-hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHH
Confidence 468899999999988887766554422 1 23345677889999999999999889999999999999999999887
Q ss_pred hhh---CC-C---ccccHHHHHhHhC
Q psy7998 124 ATL---LP-E---VESYWKIQAWIKR 142 (142)
Q Consensus 124 ~~~---~~-~---~~~~p~l~~~~~r 142 (142)
... .+ . .+.+|++.+|+++
T Consensus 77 ~~~~~~~~~~~~~~~~~p~l~~w~~~ 102 (126)
T cd03185 77 RAYEEVGGVKLLDEEKTPLLAAWAER 102 (126)
T ss_pred HHHHHHcCccccCcccCchHHHHHHH
Confidence 432 22 2 4779999999874
No 40
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.51 E-value=9.2e-14 Score=87.04 Aligned_cols=94 Identities=19% Similarity=0.323 Sum_probs=71.9
Q ss_pred HHHHHHHHHhhhccccchhhhHhHhhhhhcCcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHh
Q psy7998 45 KRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLA 124 (142)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~ 124 (142)
.++.+++|++|....+.+.+.... ...+++..+....++...|+.||++|++++|++|+++|+||+++++.+.++.
T Consensus 4 ~~a~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~ 79 (142)
T cd03190 4 LRSEIDELNEWIYDNINNGVYKAG----FATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFD 79 (142)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHH
Confidence 477899999998877765543221 1233444567788999999999999998999999999999999999987653
Q ss_pred hh----C--C--CccccHHHHHhHhC
Q psy7998 125 TL----L--P--EVESYWKIQAWIKR 142 (142)
Q Consensus 125 ~~----~--~--~~~~~p~l~~~~~r 142 (142)
.. . + .++.||+|.+|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~P~L~~w~~r 105 (142)
T cd03190 80 AVYVQHFKCNLKRIRDYPNLWNYLRR 105 (142)
T ss_pred HHhhhhcccccchhhhCchHHHHHHH
Confidence 21 1 1 25689999999975
No 41
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.50 E-value=7.9e-14 Score=82.78 Aligned_cols=97 Identities=25% Similarity=0.230 Sum_probs=68.9
Q ss_pred HHHHHHHHHhhhccccchhhhHhHhhhhh-cCcccchHHHHHHHHHHHHHHHhhccC--CceeccCCccHHHHHHHHHHH
Q psy7998 45 KRAIVDSRLHFDNGVLFPSLANIIRPMVY-EGQTTILEDKKKIALEALDFVEGLLKQ--TEWVAGDKMTVADFSLVATVT 121 (142)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~le~~L~~--~~fl~G~~~s~aD~~~~~~l~ 121 (142)
++.+++++++..... ...+...+++... ...+.......+.+.+.++.||++|++ ++|++|+++|+||+++++.+.
T Consensus 2 e~~~v~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~ 80 (104)
T cd03192 2 EAARVDALVDTIADL-RAEFAKYFYEKDGEEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLD 80 (104)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHhhcCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHH
Confidence 456777777764432 2333333322110 001334466778899999999999987 899999999999999999999
Q ss_pred HHhhhCC-C-ccccHHHHHhHhC
Q psy7998 122 SLATLLP-E-VESYWKIQAWIKR 142 (142)
Q Consensus 122 ~~~~~~~-~-~~~~p~l~~~~~r 142 (142)
++....+ . ...||+|.+|++|
T Consensus 81 ~~~~~~~~~~~~~~p~l~~~~~~ 103 (104)
T cd03192 81 YLLYLDPKLLLKKYPKLKALRER 103 (104)
T ss_pred HHHhhCchhhHHhChhHHHHHHh
Confidence 8855544 4 7889999999986
No 42
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.49 E-value=9.8e-14 Score=81.00 Aligned_cols=64 Identities=30% Similarity=0.519 Sum_probs=55.9
Q ss_pred chHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCC-Cc-cccHHHHHhHhC
Q psy7998 79 ILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLP-EV-ESYWKIQAWIKR 142 (142)
Q Consensus 79 ~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~-~~-~~~p~l~~~~~r 142 (142)
..+.....+.+.|+.+|+.|++++|++|+++|+||+++++.+.++..... .. ++||+|.+|++|
T Consensus 25 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~ 90 (95)
T PF00043_consen 25 MVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDFLFEKFPKLKKWYER 90 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTTTHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCcccccCHHHHHHHHH
Confidence 45667888999999999999999999999999999999999999966655 45 899999999975
No 43
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.49 E-value=7.1e-14 Score=81.96 Aligned_cols=93 Identities=24% Similarity=0.398 Sum_probs=68.6
Q ss_pred HHHHhhhccccchhhhHhHhhhhhc--CcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhC
Q psy7998 50 DSRLHFDNGVLFPSLANIIRPMVYE--GQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLL 127 (142)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~ 127 (142)
+.|+.+....+.+.+.....+.... ..++..+...+++.+.++.||++|++++|++|+++|+||+++++++.++....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~ 81 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFVGPEVDEAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLG 81 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhh
Confidence 3566666665555554443332211 12334566788899999999999998999999999999999999999985543
Q ss_pred CC---ccccHHHHHhHhC
Q psy7998 128 PE---VESYWKIQAWIKR 142 (142)
Q Consensus 128 ~~---~~~~p~l~~~~~r 142 (142)
.. .+.+|++.+|++|
T Consensus 82 ~~~~~~~~~p~l~~~~~~ 99 (100)
T cd00299 82 PLLGLLDEYPRLAAWYDR 99 (100)
T ss_pred hhhhhhccCccHHHHHHh
Confidence 33 6889999999975
No 44
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.48 E-value=1.9e-13 Score=83.40 Aligned_cols=97 Identities=20% Similarity=0.259 Sum_probs=74.5
Q ss_pred HHHHHHHHhhhccccchhhhHhHhhhhhc--CcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHH
Q psy7998 46 RAIVDSRLHFDNGVLFPSLANIIRPMVYE--GQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSL 123 (142)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~ 123 (142)
++.+++|+.+..+.+++.+...+.+.... .+....+...+.+...++.+|+.|+.++|++|+++|+||+++++.+.++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~ 81 (123)
T cd03181 2 EAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLG 81 (123)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHH
Confidence 67889999999888888776555443321 1223445677889999999999999889999999999999999999887
Q ss_pred hhh-CC--CccccHHHHHhHhC
Q psy7998 124 ATL-LP--EVESYWKIQAWIKR 142 (142)
Q Consensus 124 ~~~-~~--~~~~~p~l~~~~~r 142 (142)
... .. ....+|++.+|++|
T Consensus 82 ~~~~~~~~~~~~~p~l~~w~~~ 103 (123)
T cd03181 82 FTYVFDKEWRAKYPNVTRWFNT 103 (123)
T ss_pred HHHHcCHHHHHhChHHHHHHHH
Confidence 433 22 24679999999864
No 45
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.47 E-value=1.5e-13 Score=81.05 Aligned_cols=91 Identities=23% Similarity=0.300 Sum_probs=64.4
Q ss_pred HHHHhhhccccchhhhHhHhhhhhcCcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCC-
Q psy7998 50 DSRLHFDNGVLFPSLANIIRPMVYEGQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLP- 128 (142)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~- 128 (142)
++|+.+..+.+.+............. ....+....++...++.+|+.|++++|++|+++|+||+++++++.+. ...+
T Consensus 2 ~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~-~~~~~ 79 (100)
T cd03206 2 QRWLSVAAGEIANGPAAARLITLFGA-PLDKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALA-PEGGV 79 (100)
T ss_pred ceehhhhhhhcccchhHHHHHHHhCC-HhHHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHH-hccCC
Confidence 35666666666544322221111111 11235567889999999999999999999999999999999998765 3334
Q ss_pred CccccHHHHHhHhC
Q psy7998 129 EVESYWKIQAWIKR 142 (142)
Q Consensus 129 ~~~~~p~l~~~~~r 142 (142)
..+.||+|.+|++|
T Consensus 80 ~~~~~p~l~~~~~~ 93 (100)
T cd03206 80 DLEDYPAIRRWLAR 93 (100)
T ss_pred ChhhCcHHHHHHHH
Confidence 57889999999975
No 46
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.47 E-value=2.4e-13 Score=83.38 Aligned_cols=96 Identities=27% Similarity=0.354 Sum_probs=68.3
Q ss_pred HHHHHHHHhhhccccchhhhHhHhhh-----hh--cCcccchHHHHHHHHHHHHHHHhh-ccCCceeccCCccHHHHHHH
Q psy7998 46 RAIVDSRLHFDNGVLFPSLANIIRPM-----VY--EGQTTILEDKKKIALEALDFVEGL-LKQTEWVAGDKMTVADFSLV 117 (142)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~l~~le~~-L~~~~fl~G~~~s~aD~~~~ 117 (142)
++++++|+.|..+.+.+.+...+... .. ...++..+...+++.+.++.+|++ +++++|++|+++|+|||+++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~ 81 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAV 81 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHH
Confidence 45678888888777766544322211 11 112333455677899999999997 55578999999999999999
Q ss_pred HHHHHHhhhCC-C-ccccHHHHHhHhC
Q psy7998 118 ATVTSLATLLP-E-VESYWKIQAWIKR 142 (142)
Q Consensus 118 ~~l~~~~~~~~-~-~~~~p~l~~~~~r 142 (142)
+.+.+... .+ + .+.||+|.+|++|
T Consensus 82 ~~~~~~~~-~~~~~~~~~p~l~~w~~~ 107 (126)
T cd03183 82 CEIMQPEA-AGYDVFEGRPKLAAWRKR 107 (126)
T ss_pred HHHHHHHh-cCCcccccCchHHHHHHH
Confidence 98877743 34 4 5889999999975
No 47
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.46 E-value=3.8e-13 Score=82.05 Aligned_cols=94 Identities=21% Similarity=0.307 Sum_probs=66.6
Q ss_pred HHHHHHHHHhhhccccchhhhHhHhhhhhcCcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHh
Q psy7998 45 KRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLA 124 (142)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~ 124 (142)
+++.++++++.+.+.. ..+..+... ...+...+...+.+.+.+..||++|++++|++|+++|+||+++++.+.++.
T Consensus 2 e~~~id~~~~~~~d~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~ 77 (121)
T cd03209 2 ERIRVDMLEQQAMDLR-MGLARICYS---PDFEKLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHR 77 (121)
T ss_pred chHHHHHHHHHHHHHH-HHHHHhhcC---cchHHHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHH
Confidence 3566777666555332 222222111 111233455677889999999999998899999999999999999999885
Q ss_pred hhCC-CccccHHHHHhHhC
Q psy7998 125 TLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 125 ~~~~-~~~~~p~l~~~~~r 142 (142)
.... ..+.||+|.+|++|
T Consensus 78 ~~~~~~~~~~P~l~~~~~r 96 (121)
T cd03209 78 IFEPDCLDAFPNLKDFLER 96 (121)
T ss_pred HhCccccccChHHHHHHHH
Confidence 4333 57889999999875
No 48
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.45 E-value=5.4e-13 Score=81.69 Aligned_cols=91 Identities=20% Similarity=0.285 Sum_probs=68.5
Q ss_pred HHHHHHHHHhhhccccchhhhHhHhhhhhcCcccchHHHHHHHHHHHHHHHhhccC--CceeccCCccHHHHHHHHHHHH
Q psy7998 45 KRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTILEDKKKIALEALDFVEGLLKQ--TEWVAGDKMTVADFSLVATVTS 122 (142)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~fl~G~~~s~aD~~~~~~l~~ 122 (142)
+|++.+.|+.+++..+ ..+..... . ++..+...+.+...+..+|+.|++ ++|++|+++|+||+++++++.+
T Consensus 2 ~ra~~r~~~~~~~~~~-~~~~~~~~----~--~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~ 74 (124)
T cd03184 2 EKAQQKLLLERFSKVV-SAFYKLLG----A--PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFER 74 (124)
T ss_pred hHHHHHHHHHHHhhhh-HHHHHHHh----c--cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHH
Confidence 4788889998887443 33332222 1 334467788999999999999985 7999999999999999999987
Q ss_pred HhhhC-----C-CccccHHHHHhHhC
Q psy7998 123 LATLL-----P-EVESYWKIQAWIKR 142 (142)
Q Consensus 123 ~~~~~-----~-~~~~~p~l~~~~~r 142 (142)
+.... . ..+.||+|.+|++|
T Consensus 75 ~~~~~~~~~~~~~~~~~p~l~~w~~r 100 (124)
T cd03184 75 LEALKLLLGYEFPLDRFPKLKKWMDA 100 (124)
T ss_pred HHHHHhhccccCCcccChHHHHHHHH
Confidence 64331 1 36889999999975
No 49
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.42 E-value=2.2e-13 Score=80.24 Aligned_cols=63 Identities=24% Similarity=0.366 Sum_probs=51.4
Q ss_pred cchHHHHHHHHHHHHHHHhhccCCc--eeccCCccHHHHHHHHHHHHHhhhCCCc-cccHHHHHhHhC
Q psy7998 78 TILEDKKKIALEALDFVEGLLKQTE--WVAGDKMTVADFSLVATVTSLATLLPEV-ESYWKIQAWIKR 142 (142)
Q Consensus 78 ~~~~~~~~~~~~~l~~le~~L~~~~--fl~G~~~s~aD~~~~~~l~~~~~~~~~~-~~~p~l~~~~~r 142 (142)
...+...+.+.+.++.+|+.|+++. |++|++||+||+++|+.|..+... .+ +.||+|.+|++|
T Consensus 31 ~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~--~~~~~~p~L~~w~~r 96 (99)
T PF14497_consen 31 ASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWA--DFPKDYPNLVRWYER 96 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCC--HHTTTCHHHHHHHHH
T ss_pred hhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhc--ccccccHHHHHHHHh
Confidence 3456778899999999999999887 999999999999999999766422 23 589999999986
No 50
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.41 E-value=9.9e-13 Score=80.54 Aligned_cols=63 Identities=19% Similarity=0.236 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCC-C-ccccHHHHHhHhC
Q psy7998 80 LEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLP-E-VESYWKIQAWIKR 142 (142)
Q Consensus 80 ~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~-~-~~~~p~l~~~~~r 142 (142)
.+...+.+...++.+|++|++++|++|+++|+||+++++.+.++....+ + .+.||+|.+|++|
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~~~~~~~~~p~l~~W~~r 120 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVSPFPLLEEDDPVYDWFER 120 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcCcccccccCChHHHHHHH
Confidence 4567888999999999999999999999999999999999998865445 5 6789999999986
No 51
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.41 E-value=6.1e-13 Score=78.83 Aligned_cols=87 Identities=18% Similarity=0.162 Sum_probs=65.4
Q ss_pred HHHhhhccccchhhhHhHhhhhhcCcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCCCc
Q psy7998 51 SRLHFDNGVLFPSLANIIRPMVYEGQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLPEV 130 (142)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~~~ 130 (142)
+|+.|..+.+++.+...+.+. .+...+....++...++.+|++|++++|++|+++|+|||++++.+.++... +..
T Consensus 3 ~w~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~-~~~ 77 (103)
T cd03207 3 RWLFFYAGVVEPALIAKAMGI----EEPARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQF-GLL 77 (103)
T ss_pred eeeeeccccccHHHHHHHcCC----CcchhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHc-CCC
Confidence 455666666666654433221 122345567889999999999999889999999999999999999987443 335
Q ss_pred cccHHHHHhHhC
Q psy7998 131 ESYWKIQAWIKR 142 (142)
Q Consensus 131 ~~~p~l~~~~~r 142 (142)
..+|+|.+|++|
T Consensus 78 ~~~p~l~~w~~~ 89 (103)
T cd03207 78 PERPAFDAYIAR 89 (103)
T ss_pred CCChHHHHHHHH
Confidence 789999999975
No 52
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.40 E-value=1.4e-12 Score=81.21 Aligned_cols=59 Identities=24% Similarity=0.390 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHhhcc--CCceeccCCccHHHHHHHHHHHHHhhhCC-CccccHHHHHhHhC
Q psy7998 84 KKIALEALDFVEGLLK--QTEWVAGDKMTVADFSLVATVTSLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 84 ~~~~~~~l~~le~~L~--~~~fl~G~~~s~aD~~~~~~l~~~~~~~~-~~~~~p~l~~~~~r 142 (142)
.+.+.+.+..||++|+ +++|++|+++|+||+++++.+.++....+ .+..||+|.+|++|
T Consensus 41 ~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~~~~l~~~P~l~~~~~r 102 (137)
T cd03208 41 EKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELDPSLLSDFPLLQAFKTR 102 (137)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhchhhhccChHHHHHHHH
Confidence 3456799999999998 67899999999999999999998754434 57889999999875
No 53
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.38 E-value=2.6e-12 Score=78.92 Aligned_cols=93 Identities=22% Similarity=0.282 Sum_probs=64.4
Q ss_pred HHHHHHHHHhhhccccchhhhHhHhhhhhcCcccchHHHHHHHHHHHHHHHhhccC---CceeccCCccHHHHHHHHHHH
Q psy7998 45 KRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTILEDKKKIALEALDFVEGLLKQ---TEWVAGDKMTVADFSLVATVT 121 (142)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~---~~fl~G~~~s~aD~~~~~~l~ 121 (142)
+.+.++++++.+.+.. ..+...+.. ..+...+...+.+...+..||+.|++ ++|++|+++|+||+++++.+.
T Consensus 3 e~~~vd~~~~~~~d~~-~~~~~~~~~----~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~ 77 (126)
T cd03210 3 EAALIDMVNDGVEDLR-LKYVRMIYQ----NYEAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLD 77 (126)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHhcC----cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHH
Confidence 4566666666544322 222222211 11222345667788999999999974 589999999999999999998
Q ss_pred HHhhhCC-CccccHHHHHhHhC
Q psy7998 122 SLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 122 ~~~~~~~-~~~~~p~l~~~~~r 142 (142)
++....+ ..+.||+|.+|++|
T Consensus 78 ~~~~~~~~~~~~~P~l~~~~~r 99 (126)
T cd03210 78 IHLVLAPGCLDAFPLLKAFVER 99 (126)
T ss_pred HHHHhChHhhhcChHHHHHHHH
Confidence 8854444 57889999999975
No 54
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.37 E-value=4.6e-12 Score=78.08 Aligned_cols=66 Identities=21% Similarity=0.344 Sum_probs=54.8
Q ss_pred ccchHHHHHHHHHHHHHHHhhccC----------------CceeccCCccHHHHHHHHHHHHHhhh----CC-C-ccccH
Q psy7998 77 TTILEDKKKIALEALDFVEGLLKQ----------------TEWVAGDKMTVADFSLVATVTSLATL----LP-E-VESYW 134 (142)
Q Consensus 77 ~~~~~~~~~~~~~~l~~le~~L~~----------------~~fl~G~~~s~aD~~~~~~l~~~~~~----~~-~-~~~~p 134 (142)
.+..+...+.+...|+.||++|++ ++|++|+++|+|||++++.+.++... .+ . .+.||
T Consensus 24 ~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~~P 103 (134)
T cd03198 24 PALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPADLT 103 (134)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCccccCH
Confidence 444577788999999999999986 67999999999999999999877432 24 4 47899
Q ss_pred HHHHhHhC
Q psy7998 135 KIQAWIKR 142 (142)
Q Consensus 135 ~l~~~~~r 142 (142)
+|.+|++|
T Consensus 104 ~L~aw~~r 111 (134)
T cd03198 104 GLWRYLKN 111 (134)
T ss_pred HHHHHHHH
Confidence 99999975
No 55
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.35 E-value=4.1e-12 Score=75.98 Aligned_cols=67 Identities=28% Similarity=0.342 Sum_probs=55.4
Q ss_pred CcccchHHHHHHHHHHHHHHHhhccCC----------ceeccCCccHHHHHHHHHHHHHhhhCC-C-----ccccHHHHH
Q psy7998 75 GQTTILEDKKKIALEALDFVEGLLKQT----------EWVAGDKMTVADFSLVATVTSLATLLP-E-----VESYWKIQA 138 (142)
Q Consensus 75 ~~~~~~~~~~~~~~~~l~~le~~L~~~----------~fl~G~~~s~aD~~~~~~l~~~~~~~~-~-----~~~~p~l~~ 138 (142)
++.+..+....++...++.||++|+++ +|++|+++|+|||++++.+.++.. .+ + ...||+|.+
T Consensus 22 ~~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~-~~~~~~~~~~~~~P~l~~ 100 (111)
T cd03204 22 DNVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKF-LGLSRRYWGNGKRPNLEA 100 (111)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHH-cCccccccccccChHHHH
Confidence 445556778899999999999999765 499999999999999999998843 23 3 367999999
Q ss_pred hHhC
Q psy7998 139 WIKR 142 (142)
Q Consensus 139 ~~~r 142 (142)
|++|
T Consensus 101 w~~r 104 (111)
T cd03204 101 YFER 104 (111)
T ss_pred HHHH
Confidence 9975
No 56
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.33 E-value=4.7e-12 Score=72.94 Aligned_cols=62 Identities=23% Similarity=0.352 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhh-CC------CccccHHHHHhHhC
Q psy7998 81 EDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATL-LP------EVESYWKIQAWIKR 142 (142)
Q Consensus 81 ~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~-~~------~~~~~p~l~~~~~r 142 (142)
....+++.+.++.+|+.|++++|++|+++|+|||++++.+.++... .+ ..+.||+|.+|++|
T Consensus 18 ~~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r 86 (88)
T cd03193 18 REIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCER 86 (88)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHH
Confidence 3667789999999999999999999999999999999999887532 11 14679999999986
No 57
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.33 E-value=1.2e-11 Score=74.63 Aligned_cols=95 Identities=18% Similarity=0.202 Sum_probs=69.1
Q ss_pred HHHHHHHHHHhhhccccchhhhHhHhhh-hh-cCcccchHHHHHHHHHHHHHHHhhcc-CCceeccCCccHHHHHHHHHH
Q psy7998 44 KKRAIVDSRLHFDNGVLFPSLANIIRPM-VY-EGQTTILEDKKKIALEALDFVEGLLK-QTEWVAGDKMTVADFSLVATV 120 (142)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~le~~L~-~~~fl~G~~~s~aD~~~~~~l 120 (142)
.++++.+.|+.+..+.+++......... +. ...+...+...+.+.+.++.+|..|+ +++|++| ++|+||+++++.+
T Consensus 2 ~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~ 80 (114)
T cd03195 2 RQRARARQVQAWLRSDLLPIRVERSTEVVFAGAKAEPLSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALML 80 (114)
T ss_pred HhhHHHHHHHHHHHhhHHHHHHhCCccceecCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHH
Confidence 4789999999999998887522111011 11 11122446678888999999999995 4489999 6999999999999
Q ss_pred HHHhhhCC-CccccHHHHHhHhC
Q psy7998 121 TSLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 121 ~~~~~~~~-~~~~~p~l~~~~~r 142 (142)
.++ ...+ +++ |++.+|++|
T Consensus 81 ~~~-~~~g~~l~--p~l~ay~~r 100 (114)
T cd03195 81 NRL-VLNGDPVP--ERLRDYARR 100 (114)
T ss_pred HHH-HHcCCCCC--HHHHHHHHH
Confidence 988 4445 564 999999875
No 58
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.29 E-value=4.1e-11 Score=72.96 Aligned_cols=88 Identities=23% Similarity=0.462 Sum_probs=59.7
Q ss_pred cHHHHHHHHHHHhhhccccchhhhHhH-hhhhhcCcccchHHHHHHHHHHHHHHHhhcc---CCceeccCCccHHHHHHH
Q psy7998 42 DLKKRAIVDSRLHFDNGVLFPSLANII-RPMVYEGQTTILEDKKKIALEALDFVEGLLK---QTEWVAGDKMTVADFSLV 117 (142)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~fl~G~~~s~aD~~~~ 117 (142)
|+..|+.+++++.+. ..+...+ .+.+. +.. .+++...++.||+.|+ +++|++| ++|+|||+++
T Consensus 1 d~~~ra~~~~~~~~~-----~~~~~~~~~~~~~-~~~------~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~ 67 (120)
T cd03203 1 DPAKREFADELLAYT-----DAFTKALYSSLIK-GDP------SAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYV 67 (120)
T ss_pred CHHHHHHHHHHHHHH-----HHHHHHHHHHHhc-CCc------hHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHH
Confidence 356789999998872 2222222 22221 111 2344667778888776 4799999 9999999999
Q ss_pred HHHHHHhh----hCC-C-ccccHHHHHhHhC
Q psy7998 118 ATVTSLAT----LLP-E-VESYWKIQAWIKR 142 (142)
Q Consensus 118 ~~l~~~~~----~~~-~-~~~~p~l~~~~~r 142 (142)
+++.++.. ..+ + .+.||+|.+|++|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~ 98 (120)
T cd03203 68 PFIERFQIFLSELFNYDITEGRPNLAAWIEE 98 (120)
T ss_pred HHHHHHHHHHHHhcCccccccCcHHHHHHHH
Confidence 99986632 234 4 3689999999875
No 59
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=8.4e-12 Score=83.83 Aligned_cols=130 Identities=23% Similarity=0.368 Sum_probs=92.5
Q ss_pred CCCCeeeeC--CE-EeeehHHHHHHHHhhcC----CCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCcc
Q psy7998 5 KKVPVLNDN--GI-YISDSHAILTYLTSQYG----MNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQT 77 (142)
Q Consensus 5 g~vP~L~~~--~~-~l~es~~I~~yl~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (142)
-+||||-|. .+ +=.||..|++-+-..|. .... ++|.+ .+.+++.+.+++-..+. ..++..-....+
T Consensus 128 vTVPVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~d-lyP~~--Lr~eId~~n~~Iy~~vN----NGVYk~GFA~tq 200 (324)
T COG0435 128 VTVPVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVD-LYPEA--LRTEIDELNKWIYDTVN----NGVYKAGFATTQ 200 (324)
T ss_pred eeEEEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccc-cCCHH--HHHHHHHHHhhhccccc----CceeeecccchH
Confidence 478999653 33 44799999998865543 2344 78854 47778777776554443 332222223334
Q ss_pred cchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhC----C----CccccHHHHHhHh
Q psy7998 78 TILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLL----P----EVESYWKIQAWIK 141 (142)
Q Consensus 78 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~----~----~~~~~p~l~~~~~ 141 (142)
++-++....+-..|+.||+.|+++.|++|+++|.||+-+|+.|.++.... . .+..||+|..|+.
T Consensus 201 ~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr 272 (324)
T COG0435 201 EAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLR 272 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHH
Confidence 45566777888899999999999999999999999999999998874331 1 3677999999975
No 60
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.22 E-value=1.8e-11 Score=75.15 Aligned_cols=64 Identities=19% Similarity=0.233 Sum_probs=55.0
Q ss_pred chHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhh-C---C---CccccHHHHHhHhC
Q psy7998 79 ILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATL-L---P---EVESYWKIQAWIKR 142 (142)
Q Consensus 79 ~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~-~---~---~~~~~p~l~~~~~r 142 (142)
..++......+.++.|++.|++++|++|++||.+|+++++++.++... . + ..+.||||.+|++|
T Consensus 54 ~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~R 124 (126)
T cd03211 54 TLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRR 124 (126)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHh
Confidence 346778889999999999999999999999999999999999877533 1 1 27789999999987
No 61
>KOG2903|consensus
Probab=99.22 E-value=6.7e-12 Score=83.61 Aligned_cols=131 Identities=25% Similarity=0.373 Sum_probs=91.6
Q ss_pred CCCCCeeeeC---CEEeeehHHHHHHHHhhc---CC-----CCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhh
Q psy7998 4 LKKVPVLNDN---GIYISDSHAILTYLTSQY---GM-----NSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMV 72 (142)
Q Consensus 4 ~g~vP~L~~~---~~~l~es~~I~~yl~~~~---~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (142)
..+||||=|- ..+=.||..|++.+-..| .. .-. |+|.+ .+++++.+.+|+-..+. ..++..-
T Consensus 121 rfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lD-L~P~~--L~~~Ide~N~wvy~~IN----NGVYk~G 193 (319)
T KOG2903|consen 121 RFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLD-LYPSS--LRAQIDETNSWVYDKIN----NGVYKCG 193 (319)
T ss_pred eEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccc-cCCHH--HHHHHhhhhceeccccc----Cceeeec
Confidence 3478999542 344589999999997323 21 123 56644 57788888776655443 3333222
Q ss_pred hcCcccchHHHHHHHHHHHHHHHhhccCCc--eeccCCccHHHHHHHHHHHHHhhhC----C----C-ccccHHHHHhHh
Q psy7998 73 YEGQTTILEDKKKIALEALDFVEGLLKQTE--WVAGDKMTVADFSLVATVTSLATLL----P----E-VESYWKIQAWIK 141 (142)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~--fl~G~~~s~aD~~~~~~l~~~~~~~----~----~-~~~~p~l~~~~~ 141 (142)
.+...+.-+...+++-..|+.+|+.|+++. |++|+++|.||+.+|+.+.++.... . . ..+||+|..|.+
T Consensus 194 FA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk 273 (319)
T KOG2903|consen 194 FAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLK 273 (319)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHHH
Confidence 234455556677888889999999999886 9999999999999999998774432 1 1 558999999976
No 62
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.18 E-value=1.2e-10 Score=68.36 Aligned_cols=63 Identities=22% Similarity=0.271 Sum_probs=53.0
Q ss_pred ccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhh-CC-C-ccccHHHHHhHhC
Q psy7998 77 TTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATL-LP-E-VESYWKIQAWIKR 142 (142)
Q Consensus 77 ~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~-~~-~-~~~~p~l~~~~~r 142 (142)
+...+...+++.+.+..+|++|++++| +++|+|||++++.+.+.... .+ . .+.||+|.+|++|
T Consensus 32 ~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 97 (98)
T cd03205 32 QPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHPDLDWRAAHPALAAWYAR 97 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHccCcchhhhChHHHHHHHh
Confidence 344567788999999999999998888 89999999999999988543 23 3 5889999999986
No 63
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=99.17 E-value=1.2e-10 Score=72.60 Aligned_cols=62 Identities=23% Similarity=0.358 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHhhc-cCCceeccCCccHHHHHHHHHHHHHhhhCC--CccccHHHHHhHhC
Q psy7998 81 EDKKKIALEALDFVEGLL-KQTEWVAGDKMTVADFSLVATVTSLATLLP--EVESYWKIQAWIKR 142 (142)
Q Consensus 81 ~~~~~~~~~~l~~le~~L-~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~--~~~~~p~l~~~~~r 142 (142)
+..++.+...++.+=+.+ .+++|+.|++||+||+++++.+..+....+ ++..||+|.+|++|
T Consensus 78 ~D~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~~~~Dl~~~p~I~~W~eR 142 (149)
T cd03197 78 DDVREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGHPAFKDMVEETKIGEWYER 142 (149)
T ss_pred chHHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhccccchhhCcCHHHHHHH
Confidence 334556666666553434 456899999999999999999998865534 68899999999986
No 64
>KOG3028|consensus
Probab=99.17 E-value=9.3e-10 Score=75.33 Aligned_cols=139 Identities=22% Similarity=0.224 Sum_probs=96.9
Q ss_pred CCCCCCCeeee-CCEEeeehHHHHHHHHhhcCCCCCCCCc-ccHHHHHHHHHHHhhhccccchhhhHhHhhh--------
Q psy7998 2 NPLKKVPVLND-NGIYISDSHAILTYLTSQYGMNSSHLYP-RDLKKRAIVDSRLHFDNGVLFPSLANIIRPM-------- 71 (142)
Q Consensus 2 nP~g~vP~L~~-~~~~l~es~~I~~yl~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 71 (142)
.|.|++|+|+. +|..+..-.-|..+|.+.-. +-. +-+ ....+.+....++.++.+.+.+++...++-.
T Consensus 45 s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~-ky~-~d~dl~~kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~T 122 (313)
T KOG3028|consen 45 SPSGKLPYLITDNGTKVAGPVKIVQFLKKNTK-KYN-LDADLSAKQLADTLAFMSLLEENLEPALLYTFWVDTENYNEVT 122 (313)
T ss_pred CCCCCCCeEEecCCceeccHHHHHHHHHHhcc-cCC-cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHh
Confidence 68899999975 56999999999999987311 111 222 2256777888888888877766554322100
Q ss_pred ---hh---------------------------cCcccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHH
Q psy7998 72 ---VY---------------------------EGQTTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVT 121 (142)
Q Consensus 72 ---~~---------------------------~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~ 121 (142)
+. +...+..++......+++..|++.|++++|++|++||.-|+.+++.+.
T Consensus 123 kk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la 202 (313)
T KOG3028|consen 123 KKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLA 202 (313)
T ss_pred HHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHH
Confidence 00 111122355667778899999999999999999999999999999999
Q ss_pred HHhhh-CC-C-----ccccHHHHHhHhC
Q psy7998 122 SLATL-LP-E-----VESYWKIQAWIKR 142 (142)
Q Consensus 122 ~~~~~-~~-~-----~~~~p~l~~~~~r 142 (142)
.+... .+ + +...+||.+|++|
T Consensus 203 ~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~ 230 (313)
T KOG3028|consen 203 ILLQVALPNDSLQVHLLAHKNLVRYVER 230 (313)
T ss_pred HHHhccCCchhHHHHHHhcchHHHHHHH
Confidence 85333 22 1 4448888888764
No 65
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.15 E-value=1.5e-10 Score=70.53 Aligned_cols=62 Identities=24% Similarity=0.446 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHhhccC-CceeccCCccHHHHHHHHHHHHHhhhC----C-C-ccccHHHHHhHhC
Q psy7998 81 EDKKKIALEALDFVEGLLKQ-TEWVAGDKMTVADFSLVATVTSLATLL----P-E-VESYWKIQAWIKR 142 (142)
Q Consensus 81 ~~~~~~~~~~l~~le~~L~~-~~fl~G~~~s~aD~~~~~~l~~~~~~~----~-~-~~~~p~l~~~~~r 142 (142)
++..+.+.+.+..||+.|++ ++|++|+++|+||+++++++.++.... + . .+.+|+|.+|++|
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~r 97 (121)
T cd03201 29 DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKA 97 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHH
Confidence 44567788999999999984 799999999999999999877664221 2 2 3789999999975
No 66
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.15 E-value=3.1e-10 Score=68.46 Aligned_cols=59 Identities=17% Similarity=0.143 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHHhhc---cCCceeccCCccHHHHHHHHHHHHHhhhCC-CccccHHHHHhHhC
Q psy7998 80 LEDKKKIALEALDFVEGLL---KQTEWVAGDKMTVADFSLVATVTSLATLLP-EVESYWKIQAWIKR 142 (142)
Q Consensus 80 ~~~~~~~~~~~l~~le~~L---~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~-~~~~~p~l~~~~~r 142 (142)
.+...+.+.+.+..+|..+ ++++|++|+ +|+||+++++.+.++. ..+ +. .|+|.+|++|
T Consensus 39 ~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~-~~~~~~--~P~l~~~~~r 101 (114)
T cd03194 39 SEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFR-TYGLPL--SPAAQAYVDA 101 (114)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHH-HcCCCC--CHHHHHHHHH
Confidence 3455666666666666665 467899999 9999999999999884 334 43 3999999875
No 67
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=8.7e-10 Score=69.77 Aligned_cols=134 Identities=18% Similarity=0.229 Sum_probs=83.8
Q ss_pred CCCCCeee-eCCEEeeehHHHHHHHHhhcCCCCCCCCc-ccHHHHHHHHHHHhhhccccchhhhHhHhhhhh--------
Q psy7998 4 LKKVPVLN-DNGIYISDSHAILTYLTSQYGMNSSHLYP-RDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVY-------- 73 (142)
Q Consensus 4 ~g~vP~L~-~~~~~l~es~~I~~yl~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 73 (142)
.++||+|+ ++|..+.||.+|.+|+++..+ .+- +.+ ..+...++.+....+.+..+.|.+..+-.+.+.
T Consensus 45 ~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~-~~~-lt~~~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf 122 (215)
T COG2999 45 QKQVPILQKEDGRAMPESLDIVHYVDELDG-KPL-LTGKVRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYF 122 (215)
T ss_pred ccccceEEccccccchhhhHHHHHHHHhcC-chh-hccCcCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHH
Confidence 46899996 789999999999999999987 232 333 234444444444444444444444332222111
Q ss_pred -cCc----------ccchHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCCCccccHHHHHhHh
Q psy7998 74 -EGQ----------TTILEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLPEVESYWKIQAWIK 141 (142)
Q Consensus 74 -~~~----------~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~~~~~~p~l~~~~~ 141 (142)
..+ -........++...++.+++.+.+..-+ ...+|.-|+.+|+.|+.+ .......--.++..|+.
T Consensus 123 ~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l~~Li~~~s~~-n~~l~~ddi~vFplLRnl-t~v~gi~wps~v~dy~~ 199 (215)
T COG2999 123 TDKKEASEGSFESLLNHTAQYLKRIQADLRALDKLIVGPSAV-NGELSEDDILVFPLLRNL-TLVAGIQWPSRVADYRD 199 (215)
T ss_pred HhhhhhccccHHHHHhchHHHHHHHHHHHHHHHHHhcCcchh-ccccchhhhhhhHHhccc-eecccCCCcHHHHHHHH
Confidence 000 0123556778889999999988765423 347999999999999977 33222332336666654
No 68
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=99.07 E-value=3.9e-10 Score=70.13 Aligned_cols=63 Identities=19% Similarity=0.249 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhh-hCC------CccccHHHHHhHhC
Q psy7998 80 LEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLAT-LLP------EVESYWKIQAWIKR 142 (142)
Q Consensus 80 ~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~-~~~------~~~~~p~l~~~~~r 142 (142)
.++..+++.+.++.||+.|++++|++|+++|.+|+++++++..+.. ..+ ....||||.+|++|
T Consensus 62 ~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~r 131 (137)
T cd03212 62 EAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDR 131 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHH
Confidence 4667788889999999999999999999999999999999887643 222 26789999999986
No 69
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.06 E-value=2.1e-10 Score=64.07 Aligned_cols=33 Identities=48% Similarity=0.765 Sum_probs=31.0
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcCC
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYGM 33 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~~ 33 (142)
+||.|+||+|+++|.+++||.+|++||+++++.
T Consensus 41 ~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~ 73 (75)
T PF13417_consen 41 LNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPG 73 (75)
T ss_dssp HSTTSBSSEEEETTEEEESHHHHHHHHHHHSTS
T ss_pred hcccccceEEEECCEEEeCHHHHHHHHHHHcCC
Confidence 489999999999999999999999999999983
No 70
>KOG3029|consensus
Probab=99.05 E-value=1.5e-09 Score=73.40 Aligned_cols=59 Identities=20% Similarity=0.295 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHhhc-cCCceeccCCccHHHHHHHHHHHHHhhhCC--CccccHHHHHhHh
Q psy7998 83 KKKIALEALDFVEGLL-KQTEWVAGDKMTVADFSLVATVTSLATLLP--EVESYWKIQAWIK 141 (142)
Q Consensus 83 ~~~~~~~~l~~le~~L-~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~--~~~~~p~l~~~~~ 141 (142)
.++.+..+++.+-..| .+++|+.|++|++||+++|+.|..+..+-. +.-.-.+|.+|+-
T Consensus 289 ~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~afkd~~q~t~I~eW~~ 350 (370)
T KOG3029|consen 289 EREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQAFKDCLQNTSIGEWYY 350 (370)
T ss_pred HHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhHHHHHHhcchHHHHHH
Confidence 4555666666665556 467999999999999999999998855532 3444567777764
No 71
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.02 E-value=5.1e-10 Score=64.44 Aligned_cols=32 Identities=25% Similarity=0.336 Sum_probs=30.7
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcC
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYG 32 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~ 32 (142)
+||.|++|+|+++|.+++||.+|++||+++++
T Consensus 56 ~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~ 87 (91)
T cd03061 56 LAPGTQPPFLLYNGEVKTDNNKIEEFLEETLC 87 (91)
T ss_pred hCCCCCCCEEEECCEEecCHHHHHHHHHHHcc
Confidence 59999999999999999999999999999987
No 72
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.02 E-value=5.3e-10 Score=62.47 Aligned_cols=32 Identities=50% Similarity=0.915 Sum_probs=30.0
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcC
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYG 32 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~ 32 (142)
+||.+++|+|+++|..++||.+|++||+++++
T Consensus 45 ~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 45 INPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred cCCCCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 58999999999999999999999999999874
No 73
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.01 E-value=5.2e-10 Score=62.50 Aligned_cols=32 Identities=38% Similarity=0.598 Sum_probs=30.0
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhcC
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQYG 32 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~ 32 (142)
+||.|++|+|+++|.++.||.+|++||+++|+
T Consensus 44 ~~p~g~vPvl~~~g~~l~eS~~I~~yL~~~~~ 75 (75)
T cd03080 44 RSPKGKLPFIELNGEKIADSELIIDHLEEKYG 75 (75)
T ss_pred CCCCCCCCEEEECCEEEcCHHHHHHHHHHHcC
Confidence 58999999999999999999999999999874
No 74
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.00 E-value=5.3e-10 Score=62.58 Aligned_cols=31 Identities=39% Similarity=0.750 Sum_probs=28.9
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhc
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQY 31 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~ 31 (142)
+||.|++|+|+++|.+++||.+|++||++++
T Consensus 46 ~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 46 INPFGKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred hCcCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 5899999999999999999999999999864
No 75
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.00 E-value=3.9e-10 Score=62.69 Aligned_cols=28 Identities=39% Similarity=0.634 Sum_probs=26.6
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHH
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLT 28 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~ 28 (142)
+||.|+||+|+++|.+++||.+|++||+
T Consensus 46 inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 46 LNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred hCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 5999999999999999999999999985
No 76
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=98.99 E-value=5.5e-10 Score=62.64 Aligned_cols=32 Identities=38% Similarity=0.546 Sum_probs=29.3
Q ss_pred CCCCCCCCeeeeC-CEEeeehHHHHHHHHhhcC
Q psy7998 1 MNPLKKVPVLNDN-GIYISDSHAILTYLTSQYG 32 (142)
Q Consensus 1 ~nP~g~vP~L~~~-~~~l~es~~I~~yl~~~~~ 32 (142)
+||.|++|+|+++ |..++||.+|++||+++||
T Consensus 45 ~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 45 INPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred hCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 5999999999876 8999999999999999875
No 77
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=98.99 E-value=6.4e-10 Score=63.20 Aligned_cols=29 Identities=24% Similarity=0.487 Sum_probs=27.4
Q ss_pred CCCCCCeeeeCCEEeeehHHHHHHHHhhc
Q psy7998 3 PLKKVPVLNDNGIYISDSHAILTYLTSQY 31 (142)
Q Consensus 3 P~g~vP~L~~~~~~l~es~~I~~yl~~~~ 31 (142)
|+|+||+|++||.+++||.||++||++++
T Consensus 54 P~g~vP~L~~~g~~l~ES~AIl~YLa~~~ 82 (82)
T cd03075 54 DFPNLPYYIDGDVKLTQSNAILRYIARKH 82 (82)
T ss_pred cCCCCCEEEECCEEEeehHHHHHHHhhcC
Confidence 99999999999999999999999999864
No 78
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=98.98 E-value=7e-10 Score=61.65 Aligned_cols=30 Identities=23% Similarity=0.369 Sum_probs=27.9
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhh
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQ 30 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~ 30 (142)
+||.|++|+|+++|.+++||.+|++||+++
T Consensus 44 ~~p~~~vP~l~~~~~~l~es~aI~~yL~~~ 73 (73)
T cd03076 44 KMLFGQLPCFKDGDLTLVQSNAILRHLGRK 73 (73)
T ss_pred cCCCCCCCEEEECCEEEEcHHHHHHHHhcC
Confidence 599999999999999999999999999863
No 79
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=98.97 E-value=8.8e-10 Score=62.44 Aligned_cols=32 Identities=34% Similarity=0.667 Sum_probs=29.7
Q ss_pred CCCCCCCCeeeeC---CEEeeehHHHHHHHHhhcC
Q psy7998 1 MNPLKKVPVLNDN---GIYISDSHAILTYLTSQYG 32 (142)
Q Consensus 1 ~nP~g~vP~L~~~---~~~l~es~~I~~yl~~~~~ 32 (142)
+||.|+||+|+++ |..|+||.+|++||+++++
T Consensus 46 ~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~~ 80 (81)
T cd03048 46 INPNGRIPAIVDHNGTPLTVFESGAILLYLAEKYD 80 (81)
T ss_pred hCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHhC
Confidence 5999999999986 8999999999999999886
No 80
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=98.97 E-value=1.2e-09 Score=61.61 Aligned_cols=31 Identities=26% Similarity=0.616 Sum_probs=28.9
Q ss_pred CCCCCCCeeeeCCEEeeehHHHHHHHHhhcC
Q psy7998 2 NPLKKVPVLNDNGIYISDSHAILTYLTSQYG 32 (142)
Q Consensus 2 nP~g~vP~L~~~~~~l~es~~I~~yl~~~~~ 32 (142)
+|+|+||+|++||.+|+||.||++||+++++
T Consensus 47 ~~~g~vP~L~~~g~~l~ES~AI~~YL~~~~~ 77 (79)
T cd03077 47 LMFQQVPMVEIDGMKLVQTRAILNYIAGKYN 77 (79)
T ss_pred CCCCCCCEEEECCEEEeeHHHHHHHHHHHcC
Confidence 3689999999999999999999999999987
No 81
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=98.93 E-value=1.1e-09 Score=62.56 Aligned_cols=32 Identities=41% Similarity=0.568 Sum_probs=29.6
Q ss_pred CCCCCCCCeeeeC-CEEeeehHHHHHHHHhhcC
Q psy7998 1 MNPLKKVPVLNDN-GIYISDSHAILTYLTSQYG 32 (142)
Q Consensus 1 ~nP~g~vP~L~~~-~~~l~es~~I~~yl~~~~~ 32 (142)
+||.|++|+|+++ |.+++||.+|++||+++|+
T Consensus 52 ~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 52 SGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 4899999999988 8999999999999999874
No 82
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=98.93 E-value=1.7e-09 Score=59.92 Aligned_cols=31 Identities=32% Similarity=0.685 Sum_probs=28.9
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhhc
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQY 31 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~~ 31 (142)
+||.|++|+|+++|..+.||.+|++||+++|
T Consensus 43 ~~p~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 43 LNPYGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred hCCCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 5899999999999999999999999999874
No 83
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=98.89 E-value=2.3e-09 Score=59.34 Aligned_cols=29 Identities=38% Similarity=0.643 Sum_probs=27.2
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHh
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTS 29 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~ 29 (142)
+||.|++|+|+++|..++||.+|++||++
T Consensus 44 ~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 44 TLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 59999999999999999999999999974
No 84
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=98.89 E-value=2.4e-09 Score=59.83 Aligned_cols=30 Identities=33% Similarity=0.647 Sum_probs=27.9
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhh
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQ 30 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~ 30 (142)
+||.|++|+|+++|..++||.+|++||+++
T Consensus 47 ~~P~~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 47 RNPFGQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred hCCCCCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 599999999999999999999999999863
No 85
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=98.88 E-value=2.2e-09 Score=59.15 Aligned_cols=30 Identities=57% Similarity=0.832 Sum_probs=26.3
Q ss_pred CCCCCCCCeeee-CCEEeeehHHHHHHHHhh
Q psy7998 1 MNPLKKVPVLND-NGIYISDSHAILTYLTSQ 30 (142)
Q Consensus 1 ~nP~g~vP~L~~-~~~~l~es~~I~~yl~~~ 30 (142)
+||.|+||+|++ +|.++.||.+|++||++.
T Consensus 40 ~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 40 LNPRGKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp HSTT-SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred cCcCeEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 489999999996 789999999999999863
No 86
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=98.88 E-value=3.3e-09 Score=59.39 Aligned_cols=29 Identities=48% Similarity=0.910 Sum_probs=27.1
Q ss_pred CCCC-CCCCeeeeC-CEEeeehHHHHHHHHh
Q psy7998 1 MNPL-KKVPVLNDN-GIYISDSHAILTYLTS 29 (142)
Q Consensus 1 ~nP~-g~vP~L~~~-~~~l~es~~I~~yl~~ 29 (142)
+||. |++|+|+++ |..++||.||++||++
T Consensus 46 ~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 46 INPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp HTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred cccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 4899 999999998 9999999999999985
No 87
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=98.87 E-value=2.9e-09 Score=59.18 Aligned_cols=29 Identities=52% Similarity=0.842 Sum_probs=27.2
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHh
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTS 29 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~ 29 (142)
+||.|++|+|+++|.+|+||.+|++||++
T Consensus 46 ~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 46 LNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred hCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 59999999999999999999999999974
No 88
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=98.86 E-value=2.6e-09 Score=59.29 Aligned_cols=28 Identities=50% Similarity=0.796 Sum_probs=26.4
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHH
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLT 28 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~ 28 (142)
+||.|++|+|+++|..|+||.+|++||+
T Consensus 46 ~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 46 MNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred hCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 5999999999999999999999999984
No 89
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=98.84 E-value=4.3e-09 Score=58.54 Aligned_cols=31 Identities=42% Similarity=0.705 Sum_probs=28.2
Q ss_pred CCCC-CCCCeeeeCCEEeeehHHHHHHHHhhc
Q psy7998 1 MNPL-KKVPVLNDNGIYISDSHAILTYLTSQY 31 (142)
Q Consensus 1 ~nP~-g~vP~L~~~~~~l~es~~I~~yl~~~~ 31 (142)
+||. |++|+|+++|.+++||.+|++||++++
T Consensus 43 ~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 43 SNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred hCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 4895 999999999999999999999999864
No 90
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.83 E-value=4.9e-09 Score=58.08 Aligned_cols=30 Identities=23% Similarity=0.463 Sum_probs=27.3
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhh
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQ 30 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~ 30 (142)
.+|.|+||+|++||.+|+||.+|+.||.++
T Consensus 45 ~~P~GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 45 MSPSGKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred cCCCCcccEEEECCEEEeCHHHHHHHHhcC
Confidence 378999999999999999999999999863
No 91
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.82 E-value=5.3e-09 Score=58.67 Aligned_cols=31 Identities=32% Similarity=0.505 Sum_probs=27.7
Q ss_pred CCCCCCCCeeee--CCEEeeehHHHHHHHHhhc
Q psy7998 1 MNPLKKVPVLND--NGIYISDSHAILTYLTSQY 31 (142)
Q Consensus 1 ~nP~g~vP~L~~--~~~~l~es~~I~~yl~~~~ 31 (142)
+||.|+||+|++ +|..+.||.+|++||+++|
T Consensus 45 ~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 45 KGGKVQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred hCCCCcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 589999999986 4689999999999999875
No 92
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.80 E-value=6e-09 Score=57.87 Aligned_cols=28 Identities=54% Similarity=0.758 Sum_probs=26.3
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHH
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLT 28 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~ 28 (142)
+||+|++|+|+++|.+++||.+|++||+
T Consensus 46 ~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 46 FSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred hCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999984
No 93
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=98.76 E-value=8.9e-09 Score=57.44 Aligned_cols=29 Identities=34% Similarity=0.611 Sum_probs=26.5
Q ss_pred CCCCCCCCeeee-CCEEeeehHHHHHHHHh
Q psy7998 1 MNPLKKVPVLND-NGIYISDSHAILTYLTS 29 (142)
Q Consensus 1 ~nP~g~vP~L~~-~~~~l~es~~I~~yl~~ 29 (142)
+||.|++|+|++ +|.+++||.+|++||++
T Consensus 45 ~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 45 KFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred hCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 599999999996 58899999999999975
No 94
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=98.74 E-value=1.1e-08 Score=56.57 Aligned_cols=28 Identities=39% Similarity=0.659 Sum_probs=26.3
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHH
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLT 28 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~ 28 (142)
+||.|++|+|+++|..++||.+|++||+
T Consensus 46 ~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 46 LNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred hCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 4899999999999999999999999985
No 95
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.73 E-value=1.3e-08 Score=56.23 Aligned_cols=28 Identities=46% Similarity=0.770 Sum_probs=26.2
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHH
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLT 28 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~ 28 (142)
+||.|++|+|+++|..+.||.+|++||+
T Consensus 46 ~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 46 LNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred hCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999984
No 96
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=98.68 E-value=2.6e-08 Score=55.05 Aligned_cols=30 Identities=40% Similarity=0.620 Sum_probs=27.9
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHHhh
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLTSQ 30 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~~~ 30 (142)
+||.|++|+|+++|..+.||.+|++||+++
T Consensus 43 ~~p~g~vP~l~~~g~~l~es~~I~~yL~~~ 72 (72)
T cd03054 43 RSPTGKLPFLELNGEKIADSEKIIEYLKKK 72 (72)
T ss_pred cCCCcccCEEEECCEEEcCHHHHHHHHhhC
Confidence 589999999999999999999999999874
No 97
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=98.65 E-value=2.8e-08 Score=54.77 Aligned_cols=27 Identities=37% Similarity=0.519 Sum_probs=24.8
Q ss_pred CCCCCCCCeeee-CCEEeeehHHHHHHH
Q psy7998 1 MNPLKKVPVLND-NGIYISDSHAILTYL 27 (142)
Q Consensus 1 ~nP~g~vP~L~~-~~~~l~es~~I~~yl 27 (142)
+||.|+||+|++ +|..|+||.+|++|+
T Consensus 43 ~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 43 ASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred HCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 599999999987 489999999999996
No 98
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=98.63 E-value=4.6e-08 Score=54.73 Aligned_cols=31 Identities=35% Similarity=0.566 Sum_probs=27.5
Q ss_pred CCCCCCCeeeeC----CEEeeehHHHHHHHHhhcC
Q psy7998 2 NPLKKVPVLNDN----GIYISDSHAILTYLTSQYG 32 (142)
Q Consensus 2 nP~g~vP~L~~~----~~~l~es~~I~~yl~~~~~ 32 (142)
||.++||+|+++ |.+|.||.+|++||+++.+
T Consensus 43 ~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~~ 77 (77)
T cd03040 43 SSYKKVPILRVESGGDGQQLVDSSVIISTLKTYLG 77 (77)
T ss_pred hCCCccCEEEECCCCCccEEEcHHHHHHHHHHHcC
Confidence 799999999854 7899999999999998753
No 99
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=98.59 E-value=4.8e-08 Score=53.83 Aligned_cols=29 Identities=28% Similarity=0.642 Sum_probs=26.0
Q ss_pred CCCCCCCCeeeeC-CEEeeehHHHHHHHHh
Q psy7998 1 MNPLKKVPVLNDN-GIYISDSHAILTYLTS 29 (142)
Q Consensus 1 ~nP~g~vP~L~~~-~~~l~es~~I~~yl~~ 29 (142)
.||.+++|+|+++ |..+.||.+|++||++
T Consensus 42 ~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 42 MIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred hcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 4799999999875 8999999999999974
No 100
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.58 E-value=4.2e-08 Score=54.34 Aligned_cols=28 Identities=46% Similarity=0.739 Sum_probs=25.5
Q ss_pred CCCCCCCCeee-eCCEEeeehHHHHHHHH
Q psy7998 1 MNPLKKVPVLN-DNGIYISDSHAILTYLT 28 (142)
Q Consensus 1 ~nP~g~vP~L~-~~~~~l~es~~I~~yl~ 28 (142)
+||.|++|+|+ ++|..+.||.+|++||+
T Consensus 45 ~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 45 VNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred hCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 58999999997 57899999999999985
No 101
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=98.56 E-value=5.7e-08 Score=53.73 Aligned_cols=28 Identities=50% Similarity=0.758 Sum_probs=25.4
Q ss_pred CCCCCCCCeee-eCCEEeeehHHHHHHHH
Q psy7998 1 MNPLKKVPVLN-DNGIYISDSHAILTYLT 28 (142)
Q Consensus 1 ~nP~g~vP~L~-~~~~~l~es~~I~~yl~ 28 (142)
+||.|++|+|+ ++|..++||.+|++||+
T Consensus 46 ~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 46 KNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred hCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 58999999997 57889999999999985
No 102
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=98.33 E-value=7.4e-07 Score=48.22 Aligned_cols=28 Identities=57% Similarity=0.987 Sum_probs=26.0
Q ss_pred CCCCCCCCeeeeCCEEeeehHHHHHHHH
Q psy7998 1 MNPLKKVPVLNDNGIYISDSHAILTYLT 28 (142)
Q Consensus 1 ~nP~g~vP~L~~~~~~l~es~~I~~yl~ 28 (142)
++|.+++|+|+++|..+.||.+|++||+
T Consensus 44 ~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 44 LNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred cCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 4799999999999999999999999984
No 103
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.25 E-value=1.6e-05 Score=47.20 Aligned_cols=82 Identities=18% Similarity=0.221 Sum_probs=53.9
Q ss_pred cHHHHHHHHHHHhhhccccchhhhHhHhhhhhcC--cccchHHHHHHHHHHHHHHHhhccC-CceeccCCccHHHHHHHH
Q psy7998 42 DLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEG--QTTILEDKKKIALEALDFVEGLLKQ-TEWVAGDKMTVADFSLVA 118 (142)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~le~~L~~-~~fl~G~~~s~aD~~~~~ 118 (142)
|..+|++.+++..|.-+.+.+.-...-....... .....+.....+.+.+...+.+|.. ++|++| ..|+||..+.+
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFG-ewsIAD~dlA~ 79 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLADGGPNLFG-EWSIADADLAL 79 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT--SSTTS-S--HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCccc-cchHHHHHHHH
Confidence 3567899999999888777654443322222111 1334566777888888889998875 589998 89999999999
Q ss_pred HHHHHh
Q psy7998 119 TVTSLA 124 (142)
Q Consensus 119 ~l~~~~ 124 (142)
++.++.
T Consensus 80 ml~Rl~ 85 (117)
T PF14834_consen 80 MLNRLV 85 (117)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999884
No 104
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=98.19 E-value=2.6e-06 Score=47.21 Aligned_cols=29 Identities=38% Similarity=0.603 Sum_probs=27.0
Q ss_pred CCCCCCCeeeeCCEEeeehHHHHHHHHhh
Q psy7998 2 NPLKKVPVLNDNGIYISDSHAILTYLTSQ 30 (142)
Q Consensus 2 nP~g~vP~L~~~~~~l~es~~I~~yl~~~ 30 (142)
+|.|++|+|+++|..+.||..|++||.++
T Consensus 44 sp~gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 44 SPTGKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CCCCccCEEEECCEEecChHHHHHHHHHc
Confidence 58999999999999999999999999864
No 105
>KOG1147|consensus
Probab=97.87 E-value=1e-05 Score=59.78 Aligned_cols=104 Identities=15% Similarity=0.302 Sum_probs=67.5
Q ss_pred CCEEeeehHHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCcccchHHHHHHHHHHHH
Q psy7998 13 NGIYISDSHAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTILEDKKKIALEALD 92 (142)
Q Consensus 13 ~~~~l~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 92 (142)
++..+..+..+..|....-...+. +++.+ .++.+++.|+++... .....+...+.
T Consensus 44 d~~~l~~a~~~~~~~~~~~~~~~~-lf~~~-~d~~~vd~w~~~s~~-----------------------~~~~~~s~~~~ 98 (712)
T KOG1147|consen 44 DGRKLNGATEPVVYSAALAKADPK-LFGNN-IDRSQVDHWVSFSST-----------------------FSFDEISSSLS 98 (712)
T ss_pred ccccccCCccchhhhhhhcccCHh-HcCCc-ccHHHHHHHHHHhhh-----------------------cchHHHHHHHH
Confidence 345555555555555433222334 55554 567777777765542 12345666778
Q ss_pred HHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCC---CccccHHHHHhHh
Q psy7998 93 FVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLP---EVESYWKIQAWIK 141 (142)
Q Consensus 93 ~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~---~~~~~p~l~~~~~ 141 (142)
.++.+|.-+.|++|.++|+||+++|+.+..-..+.+ ....+-++.+|++
T Consensus 99 ~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~ 150 (712)
T KOG1147|consen 99 ELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLKAKKDYQNVERWYD 150 (712)
T ss_pred HHHhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHHHhhCCchhhhhhcC
Confidence 888888888999999999999999999985422222 2445778888864
No 106
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.70 E-value=0.00021 Score=44.02 Aligned_cols=61 Identities=23% Similarity=0.305 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCCCccccHHHHHhHhC
Q psy7998 80 LEDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLPEVESYWKIQAWIKR 142 (142)
Q Consensus 80 ~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~~~~~~p~l~~~~~r 142 (142)
..+...+++..|..||.++.......| ++|+.|+.+|+.|+.+ .+...+.--|++.+|+++
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~L-tivkgi~~P~~V~~Y~~~ 117 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSL-TIVKGIQWPPKVRAYMDR 117 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHH-CTCTTS---HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhh-hhccCCcCCHHHHHHHHH
Confidence 366788999999999999986555444 9999999999999988 554345545689999863
No 107
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=97.46 E-value=0.0002 Score=39.48 Aligned_cols=27 Identities=33% Similarity=0.696 Sum_probs=25.1
Q ss_pred CCCCCCCCeeee-CCEEeeehHHHHHHH
Q psy7998 1 MNPLKKVPVLND-NGIYISDSHAILTYL 27 (142)
Q Consensus 1 ~nP~g~vP~L~~-~~~~l~es~~I~~yl 27 (142)
++|.|++|+|.+ ++..+.+-..|++||
T Consensus 44 ~Sptg~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 44 LSPTGELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCCCCCCCEEEECCCcEEECHHHHHHhh
Confidence 479999999998 899999999999997
No 108
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.20 E-value=0.0022 Score=39.28 Aligned_cols=60 Identities=18% Similarity=0.229 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCCCccccHHHHHhHhC
Q psy7998 81 EDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLPEVESYWKIQAWIKR 142 (142)
Q Consensus 81 ~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~~~~~~p~l~~~~~r 142 (142)
.....+++..|..++..+..... ++..+|+.|+.+|+.|+.+ .+.....--|++.+|+++
T Consensus 59 ~~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~L-t~vkgi~~P~~V~~Y~~~ 118 (128)
T cd03199 59 PQYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNL-TLVKGLVFPPKVKAYLER 118 (128)
T ss_pred HHHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhh-hhhcCCCCCHHHHHHHHH
Confidence 56778899999999999854443 4568999999999999988 443345445689999864
No 109
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=95.59 E-value=0.038 Score=35.64 Aligned_cols=37 Identities=30% Similarity=0.376 Sum_probs=32.2
Q ss_pred HHHHHHHHHhhccCC---ceeccCC-ccHHHHHHHHHHHHH
Q psy7998 87 ALEALDFVEGLLKQT---EWVAGDK-MTVADFSLVATVTSL 123 (142)
Q Consensus 87 ~~~~l~~le~~L~~~---~fl~G~~-~s~aD~~~~~~l~~~ 123 (142)
..+.+..|++.|+.. +|+.|+. +|..||.+++.|.-+
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~ 153 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHH
Confidence 556788889999888 8999987 999999999999865
No 110
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=94.55 E-value=0.049 Score=30.32 Aligned_cols=27 Identities=26% Similarity=0.338 Sum_probs=23.9
Q ss_pred CCCCCCCeeeeCCEEeeehHHHHHHHH
Q psy7998 2 NPLKKVPVLNDNGIYISDSHAILTYLT 28 (142)
Q Consensus 2 nP~g~vP~L~~~~~~l~es~~I~~yl~ 28 (142)
++..++|++..+|..+.++..|.+||+
T Consensus 53 ~g~~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 53 TGATTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred HCCCCcCeEEECCEEEcCHHHHHHHhC
Confidence 356789999999999999999999984
No 111
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=92.65 E-value=0.17 Score=27.39 Aligned_cols=26 Identities=23% Similarity=0.305 Sum_probs=22.6
Q ss_pred CCCCCCeeeeCCEEeeehHHHHHHHH
Q psy7998 3 PLKKVPVLNDNGIYISDSHAILTYLT 28 (142)
Q Consensus 3 P~g~vP~L~~~~~~l~es~~I~~yl~ 28 (142)
...++|++..||..+.++..|.+||+
T Consensus 47 g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 47 GAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred CCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 34579999999999999999999974
No 112
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=87.95 E-value=1.2 Score=25.19 Aligned_cols=28 Identities=7% Similarity=0.169 Sum_probs=25.3
Q ss_pred CCCCeeeeCCEEeeehHHHHHHHHhhcC
Q psy7998 5 KKVPVLNDNGIYISDSHAILTYLTSQYG 32 (142)
Q Consensus 5 g~vP~L~~~~~~l~es~~I~~yl~~~~~ 32 (142)
..||++..+|..+..+..|..++.++++
T Consensus 56 ~tVP~ifi~g~~igG~~dl~~~~~~~~~ 83 (86)
T TIGR02183 56 ETVPQIFVDEKHVGGCTDFEQLVKENFD 83 (86)
T ss_pred CCcCeEEECCEEecCHHHHHHHHHhccc
Confidence 5799999999999999999999988775
No 113
>PRK10638 glutaredoxin 3; Provisional
Probab=87.45 E-value=1.1 Score=25.01 Aligned_cols=27 Identities=11% Similarity=0.076 Sum_probs=22.5
Q ss_pred CCCCCCCeeeeCCEEeeehHHHHHHHH
Q psy7998 2 NPLKKVPVLNDNGIYISDSHAILTYLT 28 (142)
Q Consensus 2 nP~g~vP~L~~~~~~l~es~~I~~yl~ 28 (142)
+|..++|++..+|..+.....+..+-.
T Consensus 48 ~g~~~vP~i~~~g~~igG~~~~~~~~~ 74 (83)
T PRK10638 48 SGRTTVPQIFIDAQHIGGCDDLYALDA 74 (83)
T ss_pred hCCCCcCEEEECCEEEeCHHHHHHHHH
Confidence 578899999999999999888777654
No 114
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=86.37 E-value=1.2 Score=23.59 Aligned_cols=26 Identities=23% Similarity=0.155 Sum_probs=18.3
Q ss_pred CCCCCCCeeeeCCEEe--eehHHHHHHH
Q psy7998 2 NPLKKVPVLNDNGIYI--SDSHAILTYL 27 (142)
Q Consensus 2 nP~g~vP~L~~~~~~l--~es~~I~~yl 27 (142)
++.+.+|+++.+|..+ .++..|.++|
T Consensus 46 ~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 46 LGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred hCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 4667899998888776 5555555554
No 115
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=85.85 E-value=2 Score=24.05 Aligned_cols=28 Identities=18% Similarity=0.293 Sum_probs=25.1
Q ss_pred CCCCeeeeCCEEeeehHHHHHHHHhhcC
Q psy7998 5 KKVPVLNDNGIYISDSHAILTYLTSQYG 32 (142)
Q Consensus 5 g~vP~L~~~~~~l~es~~I~~yl~~~~~ 32 (142)
..+|++..+|..+.....|..++.++++
T Consensus 57 ~~vP~ifi~g~~igg~~~~~~~~~~~~~ 84 (85)
T PRK11200 57 ETVPQIFVDQKHIGGCTDFEAYVKENLG 84 (85)
T ss_pred CcCCEEEECCEEEcCHHHHHHHHHHhcc
Confidence 4799999999999999999999988875
No 116
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=84.28 E-value=1.4 Score=23.10 Aligned_cols=25 Identities=20% Similarity=0.272 Sum_probs=20.8
Q ss_pred CCCCCCCeeeeCCEEeeehHHHHHH
Q psy7998 2 NPLKKVPVLNDNGIYISDSHAILTY 26 (142)
Q Consensus 2 nP~g~vP~L~~~~~~l~es~~I~~y 26 (142)
++..++|++..+|..+.++..|.+.
T Consensus 46 ~~~~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 46 SGWPTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred hCCCCcCEEEECCEEEecHHHHHHh
Confidence 5678999999999999999887653
No 117
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=81.98 E-value=1.4 Score=23.21 Aligned_cols=19 Identities=26% Similarity=0.232 Sum_probs=14.9
Q ss_pred CCCCCCCeeeeCCEEeeeh
Q psy7998 2 NPLKKVPVLNDNGIYISDS 20 (142)
Q Consensus 2 nP~g~vP~L~~~~~~l~es 20 (142)
||.+++|+++++|..+...
T Consensus 46 ~~~~~vP~i~~~~~~i~g~ 64 (73)
T cd02976 46 NGYRSVPVVVIGDEHLSGF 64 (73)
T ss_pred cCCcccCEEEECCEEEecC
Confidence 6889999999888766543
No 118
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=81.31 E-value=1.4 Score=26.85 Aligned_cols=31 Identities=26% Similarity=0.523 Sum_probs=14.2
Q ss_pred CCCCCCCeee--eCCEEeeehHHHHHHHHhhcC
Q psy7998 2 NPLKKVPVLN--DNGIYISDSHAILTYLTSQYG 32 (142)
Q Consensus 2 nP~g~vP~L~--~~~~~l~es~~I~~yl~~~~~ 32 (142)
|....-|-|. -+|..+.|+.||++|+..-|.
T Consensus 31 ~ed~~~~~L~~~~~gF~L~e~NAIvrYl~nDF~ 63 (122)
T PF09635_consen 31 NEDESGPLLKDKKSGFELFEPNAIVRYLANDFE 63 (122)
T ss_dssp -SS--S--EEE-S--S----HHHHHHHHTT--T
T ss_pred CCccccceeeecCCceEEecccHHHHHHHhhcC
Confidence 3344557784 367899999999999998776
No 119
>KOG1668|consensus
Probab=75.81 E-value=1.1 Score=30.26 Aligned_cols=49 Identities=12% Similarity=0.260 Sum_probs=35.8
Q ss_pred HHHHHHHHhhccCCceeccCCccHHHHHHHHHHHHHhhhCCCccccHHHHHhH
Q psy7998 88 LEALDFVEGLLKQTEWVAGDKMTVADFSLVATVTSLATLLPEVESYWKIQAWI 140 (142)
Q Consensus 88 ~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~~~~~~~~~~~~~p~l~~~~ 140 (142)
...+..++..|+++.|..|.+++-+|+.+|..+..-. ....+++..+|+
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~ep----~s~~~v~~~~w~ 58 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGVEP----QSARLVNAERWY 58 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhcccCc----chhhhhHHHHHH
Confidence 5678889999999999999999999999887653210 134455555555
No 120
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=75.38 E-value=4.4 Score=24.18 Aligned_cols=26 Identities=12% Similarity=0.235 Sum_probs=21.2
Q ss_pred CCee-eeCCEEeeehHHHHHHHHhhcC
Q psy7998 7 VPVL-NDNGIYISDSHAILTYLTSQYG 32 (142)
Q Consensus 7 vP~L-~~~~~~l~es~~I~~yl~~~~~ 32 (142)
+|.+ ..+|.++++|..|++++.+++.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 4666 4789999999999999988654
No 121
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=61.84 E-value=15 Score=19.93 Aligned_cols=26 Identities=19% Similarity=0.337 Sum_probs=20.4
Q ss_pred CCCCCeeeeCCEEeeehHHHHHHHHh
Q psy7998 4 LKKVPVLNDNGIYISDSHAILTYLTS 29 (142)
Q Consensus 4 ~g~vP~L~~~~~~l~es~~I~~yl~~ 29 (142)
...+|++..+|..+..+..|.++..+
T Consensus 51 ~~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 51 QRTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred CCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 35789988888888888888877654
No 122
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=61.23 E-value=16 Score=19.39 Aligned_cols=23 Identities=13% Similarity=0.176 Sum_probs=19.5
Q ss_pred CCCeeeeCCEEeeehHHHHHHHH
Q psy7998 6 KVPVLNDNGIYISDSHAILTYLT 28 (142)
Q Consensus 6 ~vP~L~~~~~~l~es~~I~~yl~ 28 (142)
.+|++..+|..+.....+.++-.
T Consensus 51 ~vP~v~i~g~~igg~~~~~~~~~ 73 (75)
T cd03418 51 TVPQIFIGDVHIGGCDDLYALER 73 (75)
T ss_pred ccCEEEECCEEEeChHHHHHHHh
Confidence 79999999999999888877643
No 123
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=57.88 E-value=20 Score=17.01 Aligned_cols=25 Identities=16% Similarity=0.201 Sum_probs=18.7
Q ss_pred CCCCCeeeeCCEEeeehHHHHHHHH
Q psy7998 4 LKKVPVLNDNGIYISDSHAILTYLT 28 (142)
Q Consensus 4 ~g~vP~L~~~~~~l~es~~I~~yl~ 28 (142)
.|.+|....++..+.....|.+|+.
T Consensus 24 ~g~i~~~~~g~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 24 EGELPAYRVGRHYRIPREDVDEYLE 48 (49)
T ss_pred cCCCCeEEeCCeEEEeHHHHHHHHh
Confidence 3677877667778888888888775
No 124
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=55.75 E-value=17 Score=19.46 Aligned_cols=23 Identities=13% Similarity=0.037 Sum_probs=17.3
Q ss_pred CCCCCCCeeeeCCEEeeehHHHH
Q psy7998 2 NPLKKVPVLNDNGIYISDSHAIL 24 (142)
Q Consensus 2 nP~g~vP~L~~~~~~l~es~~I~ 24 (142)
+|..++|++..+|..|..-....
T Consensus 47 ~g~~~vP~v~i~~~~iGg~~~~~ 69 (73)
T cd03027 47 TGSSVVPQIFFNEKLVGGLTDLK 69 (73)
T ss_pred hCCCCcCEEEECCEEEeCHHHHH
Confidence 56788999998888877655543
No 125
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=54.25 E-value=25 Score=18.98 Aligned_cols=24 Identities=25% Similarity=0.452 Sum_probs=14.7
Q ss_pred CCCCeeeeCCEEeeehHHHHHHHH
Q psy7998 5 KKVPVLNDNGIYISDSHAILTYLT 28 (142)
Q Consensus 5 g~vP~L~~~~~~l~es~~I~~yl~ 28 (142)
..+|.+..+|..+..+..+.++..
T Consensus 53 ~~vP~v~i~g~~igg~~~~~~~~~ 76 (84)
T TIGR02180 53 RTVPNIFINGKFIGGCSDLLALYK 76 (84)
T ss_pred CCCCeEEECCEEEcCHHHHHHHHH
Confidence 356666666666666666655543
No 126
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=48.29 E-value=33 Score=18.47 Aligned_cols=26 Identities=8% Similarity=0.138 Sum_probs=19.3
Q ss_pred CCCCCeeeeCCEEeeehHHHHHHHHh
Q psy7998 4 LKKVPVLNDNGIYISDSHAILTYLTS 29 (142)
Q Consensus 4 ~g~vP~L~~~~~~l~es~~I~~yl~~ 29 (142)
...+|++..+|..+.....+..+..+
T Consensus 47 ~~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 47 RRTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CCCcCEEEECCEEEcChHHHHHHHHc
Confidence 45789998888888887777666543
No 127
>PRK10329 glutaredoxin-like protein; Provisional
Probab=46.96 E-value=25 Score=19.50 Aligned_cols=16 Identities=13% Similarity=0.343 Sum_probs=12.0
Q ss_pred CCCCCCCeeeeCCEEe
Q psy7998 2 NPLKKVPVLNDNGIYI 17 (142)
Q Consensus 2 nP~g~vP~L~~~~~~l 17 (142)
++..++|+++.++..+
T Consensus 46 ~g~~~vPvv~i~~~~~ 61 (81)
T PRK10329 46 QGFRQLPVVIAGDLSW 61 (81)
T ss_pred cCCCCcCEEEECCEEE
Confidence 3667999998877554
No 128
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=43.93 E-value=15 Score=19.54 Aligned_cols=19 Identities=16% Similarity=0.461 Sum_probs=13.8
Q ss_pred CCCCCCeee-eCCEEeeehH
Q psy7998 3 PLKKVPVLN-DNGIYISDSH 21 (142)
Q Consensus 3 P~g~vP~L~-~~~~~l~es~ 21 (142)
+...+|+++ ++|..+.++.
T Consensus 48 ~~~~vP~i~~~~g~~l~~~~ 67 (77)
T TIGR02200 48 GNMTVPTVKFADGSFLTNPS 67 (77)
T ss_pred CCceeCEEEECCCeEecCCC
Confidence 778999996 5677765543
No 129
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=43.05 E-value=46 Score=18.41 Aligned_cols=25 Identities=12% Similarity=0.158 Sum_probs=16.9
Q ss_pred CCCCCCCeeeeCCEEeeehHHHHHH
Q psy7998 2 NPLKKVPVLNDNGIYISDSHAILTY 26 (142)
Q Consensus 2 nP~g~vP~L~~~~~~l~es~~I~~y 26 (142)
++..+||++..|+..+.-...+.++
T Consensus 49 ~g~~tvP~I~i~~~~igg~~d~~~~ 73 (80)
T COG0695 49 KGQRTVPQIFIGGKHVGGCDDLDAL 73 (80)
T ss_pred CCCCCcCEEEECCEEEeCcccHHHH
Confidence 3667899999888766644444433
No 130
>PF12622 NpwBP: mRNA biogenesis factor
Probab=40.77 E-value=16 Score=18.37 Aligned_cols=10 Identities=50% Similarity=0.664 Sum_probs=7.1
Q ss_pred CCCCCCCCee
Q psy7998 1 MNPLKKVPVL 10 (142)
Q Consensus 1 ~nP~g~vP~L 10 (142)
.||+|+.|--
T Consensus 11 ~NP~G~~P~g 20 (48)
T PF12622_consen 11 LNPLGKPPPG 20 (48)
T ss_pred cCCCCCCCCC
Confidence 4888887753
No 131
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=40.54 E-value=40 Score=17.53 Aligned_cols=29 Identities=10% Similarity=0.207 Sum_probs=19.6
Q ss_pred HHHHHHHhhccCCceeccCCc-cHHHHHHH
Q psy7998 89 EALDFVEGLLKQTEWVAGDKM-TVADFSLV 117 (142)
Q Consensus 89 ~~l~~le~~L~~~~fl~G~~~-s~aD~~~~ 117 (142)
+..+.+.+.+..+.|-.|+.+ |..+++--
T Consensus 4 ~i~~~l~~~I~~g~~~~g~~lps~~~la~~ 33 (64)
T PF00392_consen 4 QIYDQLRQAILSGRLPPGDRLPSERELAER 33 (64)
T ss_dssp HHHHHHHHHHHTTSS-TTSBE--HHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCEeCCHHHHHHH
Confidence 445666677777788889987 98887643
No 132
>PF12728 HTH_17: Helix-turn-helix domain
Probab=39.40 E-value=50 Score=16.13 Aligned_cols=27 Identities=11% Similarity=0.155 Sum_probs=19.7
Q ss_pred CCCCCeeeeCCEEeeehHHHHHHHHhh
Q psy7998 4 LKKVPVLNDNGIYISDSHAILTYLTSQ 30 (142)
Q Consensus 4 ~g~vP~L~~~~~~l~es~~I~~yl~~~ 30 (142)
.|.+|....|+.....-..|.+|+.++
T Consensus 24 ~g~i~~~~~g~~~~~~~~~l~~~~~~~ 50 (51)
T PF12728_consen 24 QGKIPPFKIGRKWRIPKSDLDRWLERR 50 (51)
T ss_pred cCCCCeEEeCCEEEEeHHHHHHHHHhC
Confidence 356777777777778888888887653
No 133
>PF09098 Dehyd-heme_bind: Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding; InterPro: IPR015182 Quinohemoprotein amine dehydrogenases (QHNDH) 1.4.99 from EC) are enzymes produced in the periplasmic space of certain Gram-negative bacteria, such as Paracoccus denitrificans and Pseudomonas putida, in response to primary amines, including n-butylamine and benzylamine. QHNDH catalyses the oxidative deamination of a wide range of aliphatic and aromatic amines through formation of a Schiff-base intermediate involving one of the quinone O atoms []. Catalysis requires the presence of a novel redox cofactor, cysteine tryptophylquinone (CTQ). CTQ is derived from the post-translational modification of specific residues, which involves the oxidation of the indole ring of a tryptophan residue to form tryptophylquinone, followed by covalent cross-linking with a cysteine residue []. There is one CTQ per subunit in QHNDH. In addition to CTQ, two haem c cofactors are present in QHNDH that mediate the transfer of the substrate-derived electrons from CTQ to an external electron acceptor, cytochrome c-550 [, ]. QHNDH is a heterotrimer of alpha, beta and gamma subunits. The alpha and beta subunits contain signal peptides necessary for the translocation of QHNDH to the periplasm. The alpha subunit is composed of four domains - domain 1 forming a dihaem cytochrome, and domains 2-4 forming antiparallel beta-barrel structures; the beta subunit is a 7-bladed beta-propeller that provides part of the active site; and the small, catalytic gamma subunit contains the novel cross-linked CTQ cofactor, in addition to additional thioester cross-links between Cys and Asp/Glu residues that encage CTQ. The gamma subunit assumes a globular secondary structure with two short alpha-helices having many turns and bends []. This entry represents the dihaem cytochrome c domain of the QHNDH alpha subunit. The domain contain two cysteine residues that are involved in thioether linkages to haem []. ; PDB: 1PBY_A 1JJU_A 1JMZ_A 1JMX_A.
Probab=38.35 E-value=25 Score=22.72 Aligned_cols=15 Identities=27% Similarity=0.634 Sum_probs=12.2
Q ss_pred eehHHHHHHHHhhcC
Q psy7998 18 SDSHAILTYLTSQYG 32 (142)
Q Consensus 18 ~es~~I~~yl~~~~~ 32 (142)
.|-.+|++||++++|
T Consensus 54 eer~avVkYLAd~~G 68 (167)
T PF09098_consen 54 EERRAVVKYLADTQG 68 (167)
T ss_dssp HHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHccC
Confidence 356899999999998
No 134
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=34.36 E-value=81 Score=17.70 Aligned_cols=25 Identities=16% Similarity=0.194 Sum_probs=19.1
Q ss_pred CCCCCeeeeCCEEeeehHHHHHHHH
Q psy7998 4 LKKVPVLNDNGIYISDSHAILTYLT 28 (142)
Q Consensus 4 ~g~vP~L~~~~~~l~es~~I~~yl~ 28 (142)
..++|++..+|..|.....+.....
T Consensus 61 ~~tvP~vfi~g~~iGG~~~l~~l~~ 85 (90)
T cd03028 61 WPTFPQLYVNGELVGGCDIVKEMHE 85 (90)
T ss_pred CCCCCEEEECCEEEeCHHHHHHHHH
Confidence 4578999888888888887776543
No 135
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=33.29 E-value=43 Score=18.13 Aligned_cols=24 Identities=25% Similarity=0.380 Sum_probs=19.8
Q ss_pred CCCeeeeCCEEeeehHHHHHHHHhh
Q psy7998 6 KVPVLNDNGIYISDSHAILTYLTSQ 30 (142)
Q Consensus 6 ~vP~L~~~~~~l~es~~I~~yl~~~ 30 (142)
+=||+..+| ...|-.+|.+||.+.
T Consensus 15 ~dPVi~~~G-~tyer~~I~~~l~~~ 38 (73)
T PF04564_consen 15 RDPVILPSG-HTYERSAIERWLEQN 38 (73)
T ss_dssp SSEEEETTS-EEEEHHHHHHHHCTT
T ss_pred hCceeCCcC-CEEcHHHHHHHHHcC
Confidence 448888777 789999999999883
No 136
>PF03711 OKR_DC_1_C: Orn/Lys/Arg decarboxylase, C-terminal domain; InterPro: IPR008286 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 3Q16_C 3N75_A 2X3L_A 2VYC_D.
Probab=29.69 E-value=31 Score=21.51 Aligned_cols=24 Identities=21% Similarity=0.433 Sum_probs=15.9
Q ss_pred CCeeeeCCEEeeehHHHHHHHHhh
Q psy7998 7 VPVLNDNGIYISDSHAILTYLTSQ 30 (142)
Q Consensus 7 vP~L~~~~~~l~es~~I~~yl~~~ 30 (142)
+|+|..|..+=.++..|++||...
T Consensus 89 IPll~pGE~it~~~~~~i~yl~~l 112 (136)
T PF03711_consen 89 IPLLVPGERITEETEEIIDYLLAL 112 (136)
T ss_dssp S-SB-TTEEB-STTHHHHHHHHHH
T ss_pred CcEECCccccccchHHHHHHHHHH
Confidence 788877655556689999999653
No 137
>PHA02776 E7 protein; Provisional
Probab=28.75 E-value=19 Score=21.25 Aligned_cols=13 Identities=31% Similarity=0.480 Sum_probs=11.2
Q ss_pred eccCCccHHHHHH
Q psy7998 104 VAGDKMTVADFSL 116 (142)
Q Consensus 104 l~G~~~s~aD~~~ 116 (142)
|-|.++|+-||.+
T Consensus 1 M~G~~pTl~DIvL 13 (101)
T PHA02776 1 MHGKHPTLKDIVL 13 (101)
T ss_pred CCCCCCcHhHeee
Confidence 4689999999987
No 138
>PF12290 DUF3802: Protein of unknown function (DUF3802); InterPro: IPR020979 This family of proteins is found in bacteria and are typically between 114 and 143 amino acids in length. There is a conserved KNLFD sequence motif. The annotation with this family suggests that it may be the B subunit of bacterial type IIA DNA topoisomerase but there is no evidence to support this annotation.
Probab=24.87 E-value=1.7e+02 Score=17.70 Aligned_cols=38 Identities=16% Similarity=0.059 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHhhccCCceeccCCccHHHHHHHHHHH
Q psy7998 81 EDKKKIALEALDFVEGLLKQTEWVAGDKMTVADFSLVATVT 121 (142)
Q Consensus 81 ~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~~~~~l~ 121 (142)
-...+++.....-||+.|++ ..+..+|-.-..+..-..
T Consensus 63 ~~iirE~Daiv~DLeEVLa~---V~~~~aT~eQ~~Fi~Ef~ 100 (113)
T PF12290_consen 63 FQIIREADAIVYDLEEVLAS---VWNQKATNEQIAFIEEFI 100 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHcCCCCHHHHHHHHHHH
Confidence 44567777788888888874 335567777666554333
No 139
>PF09849 DUF2076: Uncharacterized protein conserved in bacteria (DUF2076); InterPro: IPR018648 This family of hypothetical prokaryotic proteins has no known function but includes putative perimplasmic ligand-binding sensor proteins.
Probab=24.80 E-value=2.5e+02 Score=19.62 Aligned_cols=65 Identities=17% Similarity=0.179 Sum_probs=35.8
Q ss_pred HHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHHhhhccccchhhhHhHhhhhhcCcccchHHHHHHHHHHHHHHHhhc
Q psy7998 21 HAILTYLTSQYGMNSSHLYPRDLKKRAIVDSRLHFDNGVLFPSLANIIRPMVYEGQTTILEDKKKIALEALDFVEGLL 98 (142)
Q Consensus 21 ~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 98 (142)
..|-..+.+.... . .-|.|+.....|...+...-.-.+-....++ ..+...+++...++.||.+|
T Consensus 7 qLI~~lf~RL~~a-e--~~prD~eAe~lI~~~~~~qP~A~Y~laQ~vl----------vQE~AL~~a~~ri~eLe~ql 71 (247)
T PF09849_consen 7 QLIDDLFSRLKQA-E--AQPRDPEAEALIAQALARQPDAPYYLAQTVL----------VQEQALKQAQARIQELEAQL 71 (247)
T ss_pred HHHHHHHHHHHhc-c--CCCCCHHHHHHHHHHHHhCCchHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHH
Confidence 3444455554431 2 3467777677777666544433332222222 23566777777778888876
No 140
>PF13227 DUF4035: Protein of unknown function (DUF4035)
Probab=24.25 E-value=56 Score=16.82 Aligned_cols=13 Identities=31% Similarity=0.396 Sum_probs=9.9
Q ss_pred cCCccHHHHHHHH
Q psy7998 106 GDKMTVADFSLVA 118 (142)
Q Consensus 106 G~~~s~aD~~~~~ 118 (142)
|.++++.|++++.
T Consensus 30 g~k~~l~D~mp~w 42 (53)
T PF13227_consen 30 GKKPKLSDFMPFW 42 (53)
T ss_pred CCCCcHHHHHhhc
Confidence 4569999988763
No 141
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=23.43 E-value=1.7e+02 Score=21.05 Aligned_cols=40 Identities=20% Similarity=0.357 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhhccCCc--eeccCCccHHHHHHHHHHHHHhh
Q psy7998 86 IALEALDFVEGLLKQTE--WVAGDKMTVADFSLVATVTSLAT 125 (142)
Q Consensus 86 ~~~~~l~~le~~L~~~~--fl~G~~~s~aD~~~~~~l~~~~~ 125 (142)
++.+.+..||..-.+-+ --.|.++|+||+.+..-...++.
T Consensus 73 ~L~~~~~~Le~ik~~~~~~~~~~~~vS~ADLivLaG~vAiE~ 114 (297)
T cd08200 73 ELAKVLAVLEGIQKEFNESQSGGKKVSLADLIVLGGCAAVEK 114 (297)
T ss_pred HHHHHHHHHHHHHHHhcccccCCccccHHHHHHHHhHHHHHH
Confidence 46666666666432211 12345799999988777665543
No 142
>COG3646 Uncharacterized phage-encoded protein [Function unknown]
Probab=23.07 E-value=60 Score=21.11 Aligned_cols=23 Identities=13% Similarity=0.329 Sum_probs=18.8
Q ss_pred eeeCCEEeeehHHHHHHHHhhcC
Q psy7998 10 LNDNGIYISDSHAILTYLTSQYG 32 (142)
Q Consensus 10 L~~~~~~l~es~~I~~yl~~~~~ 32 (142)
|.-++.+++.|..|+++.+.++.
T Consensus 7 i~~N~~i~t~S~~IAe~~gkrH~ 29 (167)
T COG3646 7 IDSNKLIVTNSREIAEMVGKRHD 29 (167)
T ss_pred hhcCCceeecHHHHHHHHhhhhh
Confidence 33456689999999999999876
No 143
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=22.61 E-value=1.7e+02 Score=16.86 Aligned_cols=22 Identities=14% Similarity=0.256 Sum_probs=13.5
Q ss_pred CCCCCeeeeCCEEeeehHHHHH
Q psy7998 4 LKKVPVLNDNGIYISDSHAILT 25 (142)
Q Consensus 4 ~g~vP~L~~~~~~l~es~~I~~ 25 (142)
..++|.+..+|..|.....+..
T Consensus 59 ~~tvP~Vfi~g~~iGG~ddl~~ 80 (99)
T TIGR02189 59 SPAVPAVFVGGKLVGGLENVMA 80 (99)
T ss_pred CCCcCeEEECCEEEcCHHHHHH
Confidence 4567777666666666655544
No 144
>PF15471 TMEM171: Transmembrane protein family 171
Probab=21.17 E-value=2e+02 Score=20.43 Aligned_cols=23 Identities=17% Similarity=0.293 Sum_probs=19.7
Q ss_pred CceeccCCccHHHHHHHHHHHHH
Q psy7998 101 TEWVAGDKMTVADFSLVATVTSL 123 (142)
Q Consensus 101 ~~fl~G~~~s~aD~~~~~~l~~~ 123 (142)
+-|+||+.--+|.+.+|.+|--.
T Consensus 98 ~~f~CgesrQFaQ~LIFGFLFLT 120 (319)
T PF15471_consen 98 TAFFCGESRQFAQFLIFGFLFLT 120 (319)
T ss_pred ceEEecCCcchhHHHHHHHHHHh
Confidence 46999999999999999988743
No 145
>PF10990 DUF2809: Protein of unknown function (DUF2809); InterPro: IPR021257 Some members in this family of proteins are annotated as yjgA however currently no function for the protein is known.
Probab=20.86 E-value=82 Score=18.11 Aligned_cols=17 Identities=24% Similarity=0.182 Sum_probs=14.6
Q ss_pred ceeccCCccHHHHHHHH
Q psy7998 102 EWVAGDKMTVADFSLVA 118 (142)
Q Consensus 102 ~fl~G~~~s~aD~~~~~ 118 (142)
..+.|..++..|+..+.
T Consensus 71 ~lvLG~~F~w~Dll~Y~ 87 (91)
T PF10990_consen 71 RLVLGSTFDWWDLLAYA 87 (91)
T ss_pred HhhcCCCCCHHHHHHHH
Confidence 46889999999998875
No 146
>PHA03050 glutaredoxin; Provisional
Probab=20.57 E-value=1.7e+02 Score=17.28 Aligned_cols=22 Identities=18% Similarity=0.126 Sum_probs=17.5
Q ss_pred CCCCCeeeeCCEEeeehHHHHH
Q psy7998 4 LKKVPVLNDNGIYISDSHAILT 25 (142)
Q Consensus 4 ~g~vP~L~~~~~~l~es~~I~~ 25 (142)
..+||.+..+|..|.....+..
T Consensus 67 ~~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 67 GRTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred CCCcCEEEECCEEEeChHHHHH
Confidence 4589999998988888777665
No 147
>PRK14476 nitrogenase molybdenum-cofactor biosynthesis protein NifN; Provisional
Probab=20.26 E-value=3.9e+02 Score=20.43 Aligned_cols=12 Identities=17% Similarity=0.227 Sum_probs=10.1
Q ss_pred HHHHHHHhhcCC
Q psy7998 22 AILTYLTSQYGM 33 (142)
Q Consensus 22 ~I~~yl~~~~~~ 33 (142)
.++++|+++|+.
T Consensus 247 ~~a~~Lee~~Gi 258 (455)
T PRK14476 247 KAAEALEARTGV 258 (455)
T ss_pred HHHHHHHHHhCC
Confidence 678999999984
Done!