BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8
(50 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3V0Q1|DYH12_MOUSE Dynein heavy chain 12, axonemal OS=Mus musculus GN=Dnah12 PE=1 SV=2
Length = 3086
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 40/49 (81%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
MQN+ARK TIPID L ++F V+ + S+ PPEDGVY +GL+LDGARWDR
Sbjct: 2951 MQNFARKYTIPIDLLGYEFEVIPFDYSDTPPEDGVYIHGLYLDGARWDR 2999
>sp|Q923J6|DYH12_RAT Dynein heavy chain 12, axonemal OS=Rattus norvegicus GN=Dnah12 PE=2
SV=2
Length = 3092
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT 50
MQNYARK TIPID L ++F V+ + + PPEDGVY +GL+LDGARW+RT
Sbjct: 2958 MQNYARKYTIPIDLLGYEFEVIPSDNATNPPEDGVYIHGLYLDGARWNRT 3007
>sp|Q6ZR08|DYH12_HUMAN Dynein heavy chain 12, axonemal OS=Homo sapiens GN=DNAH12 PE=2 SV=2
Length = 3092
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
MQNYARK T PID L ++F V+ + S+ PEDGVY +GL+LDGARWDR
Sbjct: 2957 MQNYARKYTTPIDLLGYEFEVIPSDTSDTSPEDGVYIHGLYLDGARWDR 3005
>sp|Q8WXX0|DYH7_HUMAN Dynein heavy chain 7, axonemal OS=Homo sapiens GN=DNAH7 PE=1 SV=2
Length = 4024
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 2 QNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
QNYARK TIPID L FD+ V++ + + PPEDGV+ +GLFLDGA W+R
Sbjct: 3890 QNYARKYTIPIDLLGFDYEVMEDKEYKHPPEDGVFIHGLFLDGASWNR 3937
>sp|Q63170|DYH7_RAT Dynein heavy chain 7, axonemal OS=Rattus norvegicus GN=Dnah7 PE=2
SV=2
Length = 4057
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 36/48 (75%)
Query: 2 QNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
QNYARK TIPID L FD+ V+ + + PEDGVY +GLFLDGA W+R
Sbjct: 3923 QNYARKFTIPIDLLGFDYEVMDDKEYKNAPEDGVYIHGLFLDGASWNR 3970
>sp|Q8TD57|DYH3_HUMAN Dynein heavy chain 3, axonemal OS=Homo sapiens GN=DNAH3 PE=2 SV=1
Length = 4116
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 2 QNYARKMTIPIDHLTFDF-VVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
QNYARK TIPIDH+ F+F V Q E PEDG Y GLFL+GARWDR
Sbjct: 3981 QNYARKYTIPIDHIGFEFEVTPQETVMENNPEDGAYIKGLFLEGARWDR 4029
>sp|Q8BW94|DYH3_MOUSE Dynein heavy chain 3, axonemal OS=Mus musculus GN=Dnah3 PE=1 SV=2
Length = 4083
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 2 QNYARKMTIPIDHLTFDFVVLQINKS-EAPPEDGVYCYGLFLDGARWDRT 50
QNYARK TIPIDH+ F+F V + E PEDG Y GLFL+GARWDR+
Sbjct: 3948 QNYARKYTIPIDHIGFEFEVTPKETTMENIPEDGAYIKGLFLEGARWDRS 3997
>sp|Q63164|DYH1_RAT Dynein heavy chain 1, axonemal OS=Rattus norvegicus GN=Dnah1 PE=2
SV=2
Length = 4516
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSEAP--PEDGVYCYGLFLDGARWD 48
+QN+ARK I ID +TFDF VL SE P G Y YGLFL+GARWD
Sbjct: 4379 LQNFARKFVISIDTITFDFKVLSYASSEIAERPSTGCYIYGLFLEGARWD 4428
>sp|Q9MBF8|DYH1B_CHLRE Dynein-1-beta heavy chain, flagellar inner arm I1 complex
OS=Chlamydomonas reinhardtii GN=DHC10 PE=1 SV=1
Length = 4513
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSE--APPEDGVYCYGLFLDGARWD 48
+Q ARK ++PID L+F+F ++ +++ E APP++GVY GLFL+GA WD
Sbjct: 4379 LQTTARKASVPIDTLSFEFSIINLDEREINAPPKEGVYIKGLFLEGAGWD 4428
>sp|Q9P2D7|DYH1_HUMAN Dynein heavy chain 1, axonemal OS=Homo sapiens GN=DNAH1 PE=2 SV=4
Length = 4330
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSEAP--PEDGVYCYGLFLDGARWD 48
+QN+ARK I ID ++FDF V+ SE P+ G Y +GLFL+GARWD
Sbjct: 4193 LQNFARKFVISIDTISFDFKVMFEAPSELTQRPQVGCYIHGLFLEGARWD 4242
>sp|Q9UFH2|DYH17_HUMAN Dynein heavy chain 17, axonemal OS=Homo sapiens GN=DNAH17 PE=1 SV=2
Length = 4485
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSE--APPEDGVYCYGLFLDGARWD 48
MQ+ ARK P+D + V + N+ + APP +G Y YGLF++GARWD
Sbjct: 4359 MQSMARKNEWPLDKMCLSVEVTKKNREDMTAPPREGSYVYGLFMEGARWD 4408
>sp|Q69Z23|DYH17_MOUSE Dynein heavy chain 17, axonemal OS=Mus musculus GN=Dnah17 PE=2 SV=2
Length = 4481
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSE--APPEDGVYCYGLFLDGARWD 48
MQ+ ARK P+D + V + N+ + APP +G Y YGLF++GARWD
Sbjct: 4355 MQSMARKNEWPLDKMCLSVEVTKKNREDMTAPPREGSYVYGLFMEGARWD 4404
>sp|P0C6F1|DYH2_MOUSE Dynein heavy chain 2, axonemal OS=Mus musculus GN=Dnah2 PE=2 SV=1
Length = 4456
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSEA--PPEDGVYCYGLFLDGARWDR 49
+Q+ AR+ I +D L+++F+V ++ S PP+DGV+ GL+L+GA WDR
Sbjct: 4322 LQSAARQNNISVDSLSWEFIVSTVDDSNLVYPPKDGVWVRGLYLEGAGWDR 4372
>sp|Q9P225|DYH2_HUMAN Dynein heavy chain 2, axonemal OS=Homo sapiens GN=DNAH2 PE=2 SV=3
Length = 4427
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSEA--PPEDGVYCYGLFLDGARWDR 49
+Q+ AR+ + +D L+++F+V ++ S PP+DGV+ GL+L+GA WDR
Sbjct: 4293 LQSSARQNNVSVDSLSWEFIVSTVDDSNLVYPPKDGVWVRGLYLEGAGWDR 4343
>sp|Q9C0G6|DYH6_HUMAN Dynein heavy chain 6, axonemal OS=Homo sapiens GN=DNAH6 PE=1 SV=3
Length = 4158
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 22/70 (31%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSEA----------------------PPEDGVYCY 38
+QN+ARK +PID L+F + V+ + +A PEDGV +
Sbjct: 4002 LQNHARKYNLPIDELSFKYSVIPTYRDQAAVIEAAKTVQFGQELPMDMELPSPEDGVLVH 4061
Query: 39 GLFLDGARWD 48
G+F+D +RWD
Sbjct: 4062 GMFMDASRWD 4071
>sp|P39057|DYHC_HELCR Dynein beta chain, ciliary OS=Heliocidaris crassispina PE=1 SV=1
Length = 4466
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSE--APPEDGVYCYGLFLDGARWD 48
MQ+ ARK P+D + V + NK + + P +G Y +GLF++GARWD
Sbjct: 4340 MQSMARKNEWPLDKMCLQCDVTKKNKEDFSSAPREGSYVHGLFMEGARWD 4389
>sp|P23098|DYHC_TRIGR Dynein beta chain, ciliary OS=Tripneustes gratilla PE=1 SV=1
Length = 4466
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSE--APPEDGVYCYGLFLDGARWD 48
MQ+ ARK P+D + V + NK + + P +G Y +GLF++GARWD
Sbjct: 4340 MQSMARKNEWPLDKMCLQCDVTKKNKEDFSSAPREGSYVHGLFMEGARWD 4389
>sp|Q9NYC9|DYH9_HUMAN Dynein heavy chain 9, axonemal OS=Homo sapiens GN=DNAH9 PE=1 SV=3
Length = 4486
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSE--APPEDGVYCYGLFLDGARWD 48
MQ+ ARK P+D + + + N+ E +PP +G Y +GLF++GA WD
Sbjct: 4360 MQSTARKNEWPLDQMALQCDMTKKNREEFRSPPREGAYIHGLFMEGACWD 4409
>sp|Q96DT5|DYH11_HUMAN Dynein heavy chain 11, axonemal OS=Homo sapiens GN=DNAH11 PE=1 SV=3
Length = 4523
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSE--APPEDGVYCYGLFLDGARWD 48
MQ ARK P+D V + K + PP +G Y +GLF++GARWD
Sbjct: 4397 MQTMARKNEWPLDKTRLTADVTKKTKEDYGHPPREGAYLHGLFMEGARWD 4446
>sp|Q39610|DYHA_CHLRE Dynein alpha chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA11 PE=3 SV=2
Length = 4499
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 1 MQNYARKMTIPIDHLTFDFVVLQINKSEAPPED---GVYCYGLFLDGARWDR 49
MQ +AR +P+D + F V ++ E E GVY +GL L+GARWDR
Sbjct: 4365 MQTFARANKLPLDVMKFMTEVTRMTSPEQVTEAAPLGVYVHGLVLEGARWDR 4416
>sp|Q91XQ0|DYH8_MOUSE Dynein heavy chain 8, axonemal OS=Mus musculus GN=Dnahc8 PE=2 SV=2
Length = 4731
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 12 IDHLTFDFVVLQINKSE--APPEDGVYCYGLFLDGARWDR 49
+D +T VL+ K E PP +GVY YGL++DGA WDR
Sbjct: 4614 LDTVTIHNEVLRQTKEEIITPPAEGVYIYGLYMDGASWDR 4653
>sp|Q96JB1|DYH8_HUMAN Dynein heavy chain 8, axonemal OS=Homo sapiens GN=DNAH8 PE=1 SV=2
Length = 4490
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 12 IDHLTFDFVVLQINKSE--APPEDGVYCYGLFLDGARWDR 49
+D +T VL+ K E +PP +GVY YGL++DGA WDR
Sbjct: 4373 LDTVTIHNEVLRQTKEEITSPPGEGVYIYGLYMDGAAWDR 4412
>sp|Q0VDD8|DYH14_HUMAN Dynein heavy chain 14, axonemal OS=Homo sapiens GN=DNAH14 PE=2 SV=3
Length = 3507
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 22/71 (30%)
Query: 1 MQNYARKMTIPIDHLTFD----------------FVVLQIN------KSEAPPEDGVYCY 38
+Q+Y R I +D LTF F+ ++N K A GVY +
Sbjct: 3340 LQDYGRSRGIAVDALTFTHHVISNTTDKDEKFSVFMPKKLNIVRRAFKGSASSHTGVYIF 3399
Query: 39 GLFLDGARWDR 49
GLF++GARW+R
Sbjct: 3400 GLFIEGARWNR 3410
>sp|Q8TE73|DYH5_HUMAN Dynein heavy chain 5, axonemal OS=Homo sapiens GN=DNAH5 PE=1 SV=3
Length = 4624
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 29 APPEDGVYCYGLFLDGARWDR 49
APP +GVY YGL+L+GA WD+
Sbjct: 4527 APPTEGVYVYGLYLEGAGWDK 4547
>sp|Q8VHE6|DYH5_MOUSE Dynein heavy chain 5, axonemal OS=Mus musculus GN=Dnah5 PE=1 SV=2
Length = 4621
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 29 APPEDGVYCYGLFLDGARWDR 49
APP +GVY YGL+L+GA WD+
Sbjct: 4524 APPTEGVYVYGLYLEGAGWDK 4544
>sp|Q39565|DYHB_CHLRE Dynein beta chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA4 PE=3 SV=1
Length = 4568
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 1 MQNYARKMTIPIDH--LTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWD 48
MQ AR+ P+D + + Q ++ EA DG + +GL L+GARWD
Sbjct: 4441 MQATARRNDWPLDKTVIITEVTKKQPDQIEANSRDGAFIHGLTLEGARWD 4490
>sp|Q8IID4|DYHC2_PLAF7 Dynein heavy chain-like protein PF11_0240 OS=Plasmodium falciparum
(isolate 3D7) GN=PF11_0240 PE=3 SV=1
Length = 5251
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 2 QNYARKMTIPIDHLTFDFVVLQINKSE--APPEDGVYCYGLFLDGARW 47
Q +A++ +PID L + V I K E + +Y +GL+L GA W
Sbjct: 5099 QKFAQENKVPIDKLKLKWQVTNITKLEDLNNKNNALYIHGLYLQGASW 5146
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.142 0.462
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,658,497
Number of Sequences: 539616
Number of extensions: 519769
Number of successful extensions: 1053
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1014
Number of HSP's gapped (non-prelim): 27
length of query: 50
length of database: 191,569,459
effective HSP length: 23
effective length of query: 27
effective length of database: 179,158,291
effective search space: 4837273857
effective search space used: 4837273857
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)