BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8001
(172 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|340715105|ref|XP_003396060.1| PREDICTED: hypothetical protein LOC100651995 [Bombus terrestris]
Length = 801
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 105/178 (58%), Gaps = 19/178 (10%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSH 60
+DLYDD I + S G D T P E G +P +H+ +
Sbjct: 27 VDLYDDVIAAPAGGNGGVSTGNSGDGAGD--------TTSPNEETNGSAP----YHQLGN 74
Query: 61 HHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVT 120
+ LYVGNLTWWT++ D++DA++SIGV DF++VKFFEN +NGQSKGFC ++
Sbjct: 75 NIQPNQIGRRHQLYVGNLTWWTSDQDITDAVQSIGVSDFVEVKFFENRANGQSKGFCVIS 134
Query: 121 LGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQ-------NPLRSRSRRSY 171
LGSE+SM + MERLP ELHG+ P+V +PT+ L QFE+Q P +S+S+R +
Sbjct: 135 LGSEQSMRICMERLPKKELHGQNPVVTFPTKQALNQFESQCKTRPAPAPQQSQSQRPH 192
>gi|350397432|ref|XP_003484878.1| PREDICTED: hypothetical protein LOC100749581 [Bombus impatiens]
Length = 801
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 105/178 (58%), Gaps = 19/178 (10%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSH 60
+DLYDD I + S G D T P E G +P +H+ +
Sbjct: 27 VDLYDDVIAAPAGGNGGVSTGNSGDGAGD--------TTSPNEETNGSAP----YHQLGN 74
Query: 61 HHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVT 120
+ LYVGNLTWWT++ D++DA++SIGV DF++VKFFEN +NGQSKGFC ++
Sbjct: 75 NIQPNQIGRRHQLYVGNLTWWTSDQDITDAVQSIGVSDFVEVKFFENRANGQSKGFCVIS 134
Query: 121 LGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQ-------NPLRSRSRRSY 171
LGSE+SM + MERLP ELHG+ P+V +PT+ L QFE+Q P +S+S+R +
Sbjct: 135 LGSEQSMRICMERLPKKELHGQNPVVTFPTKQALNQFESQCKTRPAPAPQQSQSQRPH 192
>gi|328782249|ref|XP_624359.3| PREDICTED: hypothetical protein LOC551973 [Apis mellifera]
Length = 801
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 105/178 (58%), Gaps = 19/178 (10%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSH 60
+DLYDD I + S G D T P E G +P +H+ +
Sbjct: 27 VDLYDDVIAAPAGGNGGVSTGNSGDGGGD--------TTSPNEETNGSAP----YHQLGN 74
Query: 61 HHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVT 120
+ LYVGNLTWWT++ D++DA++SIGV DF++VKFFEN +NGQSKGFC ++
Sbjct: 75 NIQPNQIGRRHQLYVGNLTWWTSDQDITDAVQSIGVSDFVEVKFFENRANGQSKGFCVIS 134
Query: 121 LGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQ-------NPLRSRSRRSY 171
LGSE+SM + MERLP ELHG+ P+V +PT+ L QFE+Q P +S+S+R +
Sbjct: 135 LGSEQSMRICMERLPKKELHGQNPVVTFPTKQALNQFESQCKTRPAPAPQQSQSQRPH 192
>gi|345490306|ref|XP_003426348.1| PREDICTED: hypothetical protein LOC100121979 isoform 2 [Nasonia
vitripennis]
Length = 713
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 97/160 (60%), Gaps = 12/160 (7%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSH 60
+DLYDD I N G S+E D D E G +P +H+ +
Sbjct: 29 VDLYDDVIAA---APGNNERGTSESSERGDRDRETSNE-----ETNGNAP----YHQLGN 76
Query: 61 HHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVT 120
+ LYVGNLTWWT++ D++DA+ +IGVPDFI+VKFFEN +NG+SKGFC ++
Sbjct: 77 NIQPNQIGRRHQLYVGNLTWWTSDQDIADAVANIGVPDFIEVKFFENRANGRSKGFCVIS 136
Query: 121 LGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQ 160
LGSE+SM + MERLP ELHG+ P V YP++ L QFE+Q
Sbjct: 137 LGSEQSMRMCMERLPKKELHGQHPQVTYPSKQALNQFESQ 176
>gi|158292471|ref|XP_313937.4| AGAP005062-PA [Anopheles gambiae str. PEST]
gi|157017007|gb|EAA09472.4| AGAP005062-PA [Anopheles gambiae str. PEST]
Length = 644
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 92/146 (63%), Gaps = 10/146 (6%)
Query: 29 DDIDLYDDVTLQPFP-EHTGRSPARYRHHRYS-----HHHSQATSSSHC----NLYVGNL 78
D DLYDDV + + GR P+ R HHH A S SH LYVGNL
Sbjct: 28 DSGDLYDDVIVPSGDRNNAGRGPSMDRGDGVDTNGSYHHHPGAWSLSHIPRRHQLYVGNL 87
Query: 79 TWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLE 138
WWTT+ D++D++ +GV DF +VKFFEN +NGQSKGFC ++LGSE SM LVMERLP E
Sbjct: 88 PWWTTDQDITDSVADVGVNDFQEVKFFENRANGQSKGFCVISLGSENSMRLVMERLPKKE 147
Query: 139 LHGRKPMVAYPTRNVLYQFEAQNPLR 164
LHG+ P+V PT+ L QFE+Q R
Sbjct: 148 LHGQNPVVTLPTKQALNQFESQQKTR 173
>gi|345490304|ref|XP_001605581.2| PREDICTED: hypothetical protein LOC100121979 isoform 1 [Nasonia
vitripennis]
Length = 748
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 97/160 (60%), Gaps = 12/160 (7%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSH 60
+DLYDD I N G S+E D D E G +P +H+ +
Sbjct: 29 VDLYDDVIAA---APGNNERGTSESSERGDRDRETSNE-----ETNGNAP----YHQLGN 76
Query: 61 HHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVT 120
+ LYVGNLTWWT++ D++DA+ +IGVPDFI+VKFFEN +NG+SKGFC ++
Sbjct: 77 NIQPNQIGRRHQLYVGNLTWWTSDQDIADAVANIGVPDFIEVKFFENRANGRSKGFCVIS 136
Query: 121 LGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQ 160
LGSE+SM + MERLP ELHG+ P V YP++ L QFE+Q
Sbjct: 137 LGSEQSMRMCMERLPKKELHGQHPQVTYPSKQALNQFESQ 176
>gi|383855542|ref|XP_003703269.1| PREDICTED: uncharacterized protein LOC100878557 [Megachile
rotundata]
Length = 800
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 104/178 (58%), Gaps = 19/178 (10%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSH 60
+DLYDD I + S G D T P E G +P +H+ +
Sbjct: 27 VDLYDDVIAAPAGGNGGVSTGNSGDGGGD--------TTSPNEETNGSAP----YHQLGN 74
Query: 61 HHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVT 120
+ LYVGNLTWWT++ D++DA++SIGV DF++VKFFEN +NGQSKGFC ++
Sbjct: 75 NIQPNQIGRRHQLYVGNLTWWTSDQDITDAVQSIGVSDFVEVKFFENRANGQSKGFCVIS 134
Query: 121 LGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQ-------NPLRSRSRRSY 171
LGSE+SM MERLP ELHG+ P+V +PT+ L QFE+Q P +S+S+R +
Sbjct: 135 LGSEQSMRTCMERLPKKELHGQNPVVTFPTKQALNQFESQCKTRPAPAPQQSQSQRPH 192
>gi|403182456|gb|EJY57399.1| AAEL017164-PA [Aedes aegypti]
Length = 615
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 94/145 (64%), Gaps = 13/145 (8%)
Query: 32 DLYDDVTLQPFPEH----TGRSPARYR------HHRYSHHHSQATS--SSHCNLYVGNLT 79
DLYDDV + P +H +GR P+ R + Y HH S + + LYVGNL+
Sbjct: 31 DLYDDV-ITPSGDHGRNSSGRGPSMERLDGVDTNGAYHHHGSGPMNHMARRFQLYVGNLS 89
Query: 80 WWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLEL 139
WWTT+ D++DAI +GV DF +VKFFEN +NGQSKGFC V+LGSE SM VMERLP EL
Sbjct: 90 WWTTDQDIADAIAEVGVNDFQEVKFFENRANGQSKGFCVVSLGSENSMRYVMERLPKKEL 149
Query: 140 HGRKPMVAYPTRNVLYQFEAQNPLR 164
HG+ P+V PT+ L QFE+Q R
Sbjct: 150 HGQNPVVTLPTKQALNQFESQQKTR 174
>gi|242022595|ref|XP_002431725.1| Cleavage and polyadenylation specificity factor, putative
[Pediculus humanus corporis]
gi|212517040|gb|EEB18987.1| Cleavage and polyadenylation specificity factor, putative
[Pediculus humanus corporis]
Length = 535
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 102/176 (57%), Gaps = 19/176 (10%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRH----- 55
+D+Y D I + T+ GE +D +DLYDDV P +P R
Sbjct: 7 IDIYGDDI------EPETATGEM--DIYDGVDLYDDVIAAPQGSEENVNPNRIPQGAPPV 58
Query: 56 ------HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENAS 109
+ + LYVGNLTWWTT+ D++DA+ SIGV DF++VKFFEN +
Sbjct: 59 TPGPSPNGLAFPPKNPQILQRFQLYVGNLTWWTTDQDITDAVLSIGVTDFMEVKFFENRA 118
Query: 110 NGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRS 165
NGQSKGFC ++LGSE SM + +ERLP ELHG+ P+V +P++ L QFE+Q+ RS
Sbjct: 119 NGQSKGFCVISLGSEPSMRICLERLPKKELHGQLPVVTFPSKQALSQFESQSKTRS 174
>gi|170037453|ref|XP_001846572.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880680|gb|EDS44063.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 633
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 93/145 (64%), Gaps = 13/145 (8%)
Query: 32 DLYDDVTLQPFPEH----TGRSPARYR----HHRYSHHHSQATSSSHC----NLYVGNLT 79
DLYDDV + P +H +GR P+ R +HH + S +H LY+GNL+
Sbjct: 31 DLYDDV-ITPSGDHGRNNSGRGPSMDRLDGSDRNGDYHHHGSGSMNHIARRHQLYIGNLS 89
Query: 80 WWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLEL 139
WWTT+ D++D I +GV DF +VKFFEN +NGQSKGFC V+LGSE SM VMERLP EL
Sbjct: 90 WWTTDQDIADVIGDVGVNDFQEVKFFENRANGQSKGFCVVSLGSENSMRYVMERLPKKEL 149
Query: 140 HGRKPMVAYPTRNVLYQFEAQNPLR 164
HG+ P+V PT+ L QFE+Q R
Sbjct: 150 HGQNPVVTLPTKQALNQFESQQKTR 174
>gi|307179431|gb|EFN67755.1| Cleavage and polyadenylation specificity factor subunit 6
[Camponotus floridanus]
Length = 703
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 100/172 (58%), Gaps = 33/172 (19%)
Query: 29 DDIDLYDDVTLQPFP----------------------EHTGRSPARYRHHRYSHHHSQAT 66
D +DLYDDV P E G +P +H+ ++
Sbjct: 25 DGVDLYDDVIAAPAGGNGGVSSGNTGDGGGDTTSPNEETNGNAP----YHQLGNNIQPNQ 80
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
LYVGNLTWWT++ D++DA++SIGV DF +VKFFEN +NGQSKGFC ++LGSE+S
Sbjct: 81 IGRRHQLYVGNLTWWTSDQDITDAVQSIGVTDFAEVKFFENRANGQSKGFCVISLGSEQS 140
Query: 127 MSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQ-------NPLRSRSRRSY 171
M + MERLP ELHG+ P+V +PT+ L QFE+Q P +S+S+R +
Sbjct: 141 MRICMERLPKKELHGQNPVVTFPTKQALNQFESQCKTRPAPAPQQSQSQRPH 192
>gi|357602141|gb|EHJ63283.1| hypothetical protein KGM_19550 [Danaus plexippus]
Length = 690
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 95/152 (62%), Gaps = 15/152 (9%)
Query: 29 DDIDLYDDVTLQP-FPEHTGRSPARYRHHRYSH----------HHSQATSSSH----CNL 73
+++DLYDDV P G P +SH +H+ A S H L
Sbjct: 28 ENVDLYDDVIAAPTVKTEDGDGPPNSSAAPHSHPPEETNGSVPYHNNAPSHGHHGRRFQL 87
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
YVGNLTWW T+ D+++AI IGV DF DVKFFEN +NGQSKGFC V+LGS++S+ +VM+R
Sbjct: 88 YVGNLTWWATDQDIANAIADIGVTDFQDVKFFENRANGQSKGFCVVSLGSDQSIRMVMDR 147
Query: 134 LPTLELHGRKPMVAYPTRNVLYQFEAQNPLRS 165
LP E+HG+ P+V PT+ L QFE+Q+ RS
Sbjct: 148 LPKKEIHGQHPVVTLPTKQALNQFESQSKTRS 179
>gi|328707203|ref|XP_001951351.2| PREDICTED: hypothetical protein LOC100167151 [Acyrthosiphon pisum]
Length = 669
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 75/92 (81%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNLTWWTT+ D++D++ SIGV DFI+VKFFEN NGQSKGFC VTLGSE S+ +VM+
Sbjct: 89 LYIGNLTWWTTDQDITDSVTSIGVSDFIEVKFFENRGNGQSKGFCVVTLGSEHSLRMVMD 148
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQNPLR 164
RLP ELHG+ P+V +PT+ L QFE+Q+ R
Sbjct: 149 RLPKKELHGQSPVVTFPTKQALLQFESQSKTR 180
>gi|322800486|gb|EFZ21490.1| hypothetical protein SINV_13495 [Solenopsis invicta]
Length = 507
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 90/151 (59%), Gaps = 26/151 (17%)
Query: 29 DDIDLYDDV----------------------TLQPFPEHTGRSPARYRHHRYSHHHSQAT 66
D +DLYDDV T P E G +P +H+ ++
Sbjct: 7 DGVDLYDDVIAAPAGGNGGVSSGNTTEGGGDTTSPNEETNGNAP----YHQLGNNIQPNQ 62
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
LYVGNLTWWT++ D++DA++SIGV DF++VKFFEN +NGQSKGFC ++LGSE+S
Sbjct: 63 IGRRHQLYVGNLTWWTSDQDITDAVQSIGVTDFVEVKFFENRANGQSKGFCVISLGSEQS 122
Query: 127 MSLVMERLPTLELHGRKPMVAYPTRNVLYQF 157
M + MERLP ELHG+ P+V +PT+ L Q
Sbjct: 123 MRICMERLPKKELHGQNPVVTFPTKQALNQV 153
>gi|312372914|gb|EFR20768.1| hypothetical protein AND_19486 [Anopheles darlingi]
Length = 693
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 77/111 (69%), Gaps = 4/111 (3%)
Query: 58 YSHHHSQATSSSHC----NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQS 113
Y HH + H LYVGNL WWTT+ D++D++ ++GV DF +VKFFEN +NGQS
Sbjct: 76 YHHHAPGGWALGHAPRRHQLYVGNLPWWTTDQDIADSVANVGVNDFQEVKFFENRANGQS 135
Query: 114 KGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLR 164
KGFC ++LGSE SM LVMERLP ELHG+ P+V PT+ L QFE+Q R
Sbjct: 136 KGFCVISLGSETSMRLVMERLPKKELHGQNPVVTLPTKQALNQFESQQKTR 186
>gi|427788199|gb|JAA59551.1| Putative mrna cleavage factor i subunit/cpsf subunit [Rhipicephalus
pulchellus]
Length = 633
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 91/138 (65%), Gaps = 7/138 (5%)
Query: 26 TEHD-DIDLYDDVTLQPFPE-HTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTT 83
EHD ++DLYDDV P + +T P + + H S+ + LY+GNLTWWTT
Sbjct: 24 NEHDANVDLYDDVIAAPSSDGNTDEVPGIGNQSQGNSHPSKRVA-----LYIGNLTWWTT 78
Query: 84 EADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRK 143
+ D++DAI ++GV D +D+KFFEN +NGQSKGFC VTLGS+ ++ VME+LP +LHG+
Sbjct: 79 DQDVTDAISAVGVNDVLDIKFFENRANGQSKGFCIVTLGSDSAVRAVMEKLPKKDLHGQN 138
Query: 144 PMVAYPTRNVLYQFEAQN 161
P+V +R L FE Q+
Sbjct: 139 PVVTTCSRQHLNHFEMQS 156
>gi|332024022|gb|EGI64240.1| Cleavage and polyadenylation specificity factor subunit [Acromyrmex
echinatior]
Length = 799
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 97/172 (56%), Gaps = 33/172 (19%)
Query: 29 DDIDLYDDV----------------------TLQPFPEHTGRSPARYRHHRYSHHHSQAT 66
D +DLYDDV T P E G +P +H+ ++
Sbjct: 25 DGVDLYDDVIAAPAGGNGGVSSGNTGEGGGDTTSPSEETNGNAP----YHQLGNNIQPNQ 80
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
LYVGNLTWWT++ D++DA++SIGV DF +VKFFEN +NGQSKGFC ++LGSE+S
Sbjct: 81 IGRRHQLYVGNLTWWTSDQDITDAVQSIGVTDFAEVKFFENRANGQSKGFCVISLGSEQS 140
Query: 127 MSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQ-------NPLRSRSRRSY 171
M + MERLP ELHG+ P+V V +FE+Q P +S+S+R +
Sbjct: 141 MRICMERLPKKELHGQNPVVTLVCIIVHCEFESQCKTRPAPAPQQSQSQRPH 192
>gi|242002256|ref|XP_002435771.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
gi|215499107|gb|EEC08601.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
Length = 540
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 88/149 (59%), Gaps = 16/149 (10%)
Query: 26 TEHD-DIDLYDDVTLQPFPEHTGRSPARYRHHR------------YSHHHSQATSSSHCN 72
+HD ++DLYDDV P + A HR +HH A
Sbjct: 24 NDHDQNVDLYDDVIAAPSSDGNSDERALKIAHRTKPPVGGMMGQNQGNHHLPA---KRVG 80
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+Y+GNLTWWTT+ D++DAI ++GV D +D+KFFEN +NGQSKGFC VTLGS+ S VM+
Sbjct: 81 IYIGNLTWWTTDQDVTDAISAVGVNDVLDIKFFENRANGQSKGFCIVTLGSDSSFRAVMD 140
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+LP ELHG+ P+V +R L FE Q+
Sbjct: 141 KLPKKELHGQNPVVTPCSRQHLNHFEMQS 169
>gi|195427469|ref|XP_002061799.1| GK16997 [Drosophila willistoni]
gi|194157884|gb|EDW72785.1| GK16997 [Drosophila willistoni]
Length = 660
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 70/88 (79%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVGNLTWWTT+ D+S+A+R IGV D +VKFFEN +NGQSKGF ++LGSE+S+ V+
Sbjct: 97 QLYVGNLTWWTTDQDISNALRDIGVADLQEVKFFENRANGQSKGFSVISLGSEQSLRAVL 156
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEA 159
E+LP E+HG+ P+V YP++ L QFE+
Sbjct: 157 EQLPKKEMHGQTPVVTYPSKQALTQFES 184
>gi|321469371|gb|EFX80351.1| hypothetical protein DAPPUDRAFT_224649 [Daphnia pulex]
Length = 421
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
Query: 60 HHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTV 119
H + ++ S LYVGNLTWWTT+AD+ +AI +IGV D ++V+F EN +NGQSKGFC +
Sbjct: 79 HGSNSSSQSKRIQLYVGNLTWWTTDADVENAISAIGVQDLVEVRFHENRANGQSKGFCVI 138
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRR 169
T+GSE S M++LP +LHG+ P+V + ++ L QFEAQ+ +SR R
Sbjct: 139 TVGSEISARQCMDKLPKKDLHGQTPIVTFTSKQALNQFEAQS--KSRPSR 186
>gi|307198915|gb|EFN79667.1| Cleavage and polyadenylation specificity factor subunit 6
[Harpegnathos saltator]
Length = 598
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 82/139 (58%), Gaps = 26/139 (18%)
Query: 29 DDIDLYDDVTLQPFP----------------------EHTGRSPARYRHHRYSHHHSQAT 66
D +DLYDDV P E G +P +H+ ++
Sbjct: 25 DGVDLYDDVIAAPAGGNGGVSSGNTGDGGGDTTSPNEETNGNAP----YHQLGNNIQPNQ 80
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
LYVGNLTWWT++ D++DA++SIGV DF++VKFFEN +NGQSKGFC ++LGSE+S
Sbjct: 81 IGRRHQLYVGNLTWWTSDQDITDAVQSIGVTDFVEVKFFENRANGQSKGFCVISLGSEQS 140
Query: 127 MSLVMERLPTLELHGRKPM 145
M + MERLP ELHG+ P+
Sbjct: 141 MRICMERLPKKELHGQNPI 159
>gi|194752081|ref|XP_001958351.1| GF23561 [Drosophila ananassae]
gi|190625633|gb|EDV41157.1| GF23561 [Drosophila ananassae]
Length = 650
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 70/88 (79%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVGNLTWWTT+ D+++A+R IGV D +VKFFEN +NGQSKGF ++LGSE S+ V+
Sbjct: 94 QLYVGNLTWWTTDQDIANALRDIGVNDLQEVKFFENRANGQSKGFSVISLGSESSLRSVL 153
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEA 159
++LP +E+HG+ P+V YP++ L QFE+
Sbjct: 154 DQLPKVEMHGQAPVVTYPSKQALTQFES 181
>gi|195325965|ref|XP_002029701.1| GM24949 [Drosophila sechellia]
gi|194118644|gb|EDW40687.1| GM24949 [Drosophila sechellia]
Length = 652
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 98/163 (60%), Gaps = 15/163 (9%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSH 60
+DLYDD +G GPT++ S G T D + +P ++G Y
Sbjct: 30 VDLYDD--IG-GPTESAASGGGGGGTPSAD-GAAGPGSGEPGERNSGGPNGVY------- 78
Query: 61 HHSQATSSSHCN----LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGF 116
H S + + N LYVGNLTWWTT+ D+S+++R IGV D +VKFFEN +NGQSKGF
Sbjct: 79 HQSSGSLTPTMNRRYQLYVGNLTWWTTDQDISNSLRDIGVSDLQEVKFFENRANGQSKGF 138
Query: 117 CTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEA 159
++LGSE S+ V+++LP E+HG+ P+V YP++ L QFE+
Sbjct: 139 SVISLGSESSLRAVLDQLPKKEMHGQAPVVTYPSKQALTQFES 181
>gi|291244836|ref|XP_002742300.1| PREDICTED: cleavage and polyadenylation specificity factor,
putative-like [Saccoglossus kowalevskii]
Length = 634
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 84/134 (62%), Gaps = 7/134 (5%)
Query: 30 DIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHS-----QATSSSHCNLYVGNLTWWTTE 84
++DLYDDV P G+ + +S + Q +S +LYVGNLTWWTT+
Sbjct: 30 NVDLYDDVITAP--ASNGQGVENFSDGVHSKAPTTPTSLQTSSGKRVSLYVGNLTWWTTD 87
Query: 85 ADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKP 144
D++D+I S+GV D ++KF+EN +NGQSKGFC V +GSE S L+M++LP ELHG+ P
Sbjct: 88 QDLADSIMSVGVNDLQEIKFYENRANGQSKGFCAVHVGSENSYRLIMDKLPKRELHGQLP 147
Query: 145 MVAYPTRNVLYQFE 158
+V R L QFE
Sbjct: 148 VVTPCNRVSLNQFE 161
>gi|198466934|ref|XP_001354190.2| GA20165 [Drosophila pseudoobscura pseudoobscura]
gi|198149431|gb|EAL31242.2| GA20165 [Drosophila pseudoobscura pseudoobscura]
Length = 649
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 69/88 (78%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVGNLTWWTT+ D+S+A+R IGV D +VKFFEN +NGQSKGF ++LG+E S+ V+
Sbjct: 94 QLYVGNLTWWTTDQDISNALRDIGVNDLQEVKFFENRANGQSKGFSVISLGTESSLRAVL 153
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEA 159
++LP E+HG+ P+V YP++ L QFE+
Sbjct: 154 DQLPKKEMHGQAPVVTYPSKQALTQFES 181
>gi|386770785|ref|NP_001246665.1| CG7185, isoform B [Drosophila melanogaster]
gi|383291808|gb|AFH04336.1| CG7185, isoform B [Drosophila melanogaster]
Length = 605
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 98/163 (60%), Gaps = 15/163 (9%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSH 60
+DLYDD +G GPT++ S G T D + +P ++G Y
Sbjct: 30 VDLYDD--IG-GPTESAASGGGGGGTPSAD-GAAGPGSGEPGERNSGGPNGVY------- 78
Query: 61 HHSQATSSSHCN----LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGF 116
H S + + N LYVGNLTWWTT+ D+++++R IGV D +VKFFEN +NGQSKGF
Sbjct: 79 HQSSGSLTPTMNRRYQLYVGNLTWWTTDQDIANSLRDIGVSDLQEVKFFENRANGQSKGF 138
Query: 117 CTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEA 159
++LGSE S+ V+++LP E+HG+ P+V YP++ L QFE+
Sbjct: 139 SVISLGSESSLRAVLDQLPKKEMHGQAPVVTYPSKQALTQFES 181
>gi|195588703|ref|XP_002084097.1| GD13000 [Drosophila simulans]
gi|194196106|gb|EDX09682.1| GD13000 [Drosophila simulans]
Length = 661
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 98/163 (60%), Gaps = 15/163 (9%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSH 60
+DLYDD +G GPT++ S G T D + +P ++G Y
Sbjct: 30 VDLYDD--IG-GPTESAASGGGGGGTPSAD-GAAGPGSGEPGERNSGGPNGVY------- 78
Query: 61 HHSQATSSSHCN----LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGF 116
H S + + N LYVGNLTWWTT+ D+++++R IGV D +VKFFEN +NGQSKGF
Sbjct: 79 HQSSGSLTPTMNRRYQLYVGNLTWWTTDQDIANSLRDIGVSDLQEVKFFENRANGQSKGF 138
Query: 117 CTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEA 159
++LGSE S+ V+++LP E+HG+ P+V YP++ L QFE+
Sbjct: 139 SVISLGSESSLRAVLDQLPKKEMHGQAPVVTYPSKQALTQFES 181
>gi|21355973|ref|NP_648206.1| CG7185, isoform A [Drosophila melanogaster]
gi|75027435|sp|Q9VSH4.2|CPSF6_DROME RecName: Full=Cleavage and polyadenylation specificity factor
subunit CG7185
gi|16198023|gb|AAL13792.1| LD25239p [Drosophila melanogaster]
gi|23093944|gb|AAF50445.2| CG7185, isoform A [Drosophila melanogaster]
gi|220945874|gb|ACL85480.1| CG7185-PA [synthetic construct]
gi|220955546|gb|ACL90316.1| CG7185-PA [synthetic construct]
Length = 652
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 98/163 (60%), Gaps = 15/163 (9%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSH 60
+DLYDD +G GPT++ S G T D + +P ++G Y
Sbjct: 30 VDLYDD--IG-GPTESAASGGGGGGTPSAD-GAAGPGSGEPGERNSGGPNGVY------- 78
Query: 61 HHSQATSSSHCN----LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGF 116
H S + + N LYVGNLTWWTT+ D+++++R IGV D +VKFFEN +NGQSKGF
Sbjct: 79 HQSSGSLTPTMNRRYQLYVGNLTWWTTDQDIANSLRDIGVSDLQEVKFFENRANGQSKGF 138
Query: 117 CTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEA 159
++LGSE S+ V+++LP E+HG+ P+V YP++ L QFE+
Sbjct: 139 SVISLGSESSLRAVLDQLPKKEMHGQAPVVTYPSKQALTQFES 181
>gi|194865934|ref|XP_001971676.1| GG15090 [Drosophila erecta]
gi|190653459|gb|EDV50702.1| GG15090 [Drosophila erecta]
Length = 651
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 69/88 (78%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVGNLTWWTT+ D+++++R IGV D +VKFFEN +NGQSKGF ++LGSE S+ V+
Sbjct: 93 QLYVGNLTWWTTDQDIANSLRDIGVSDLQEVKFFENRANGQSKGFSVISLGSESSLRAVL 152
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEA 159
++LP E+HG+ P+V YP++ L QFE+
Sbjct: 153 DQLPKKEMHGQAPVVTYPSKQALTQFES 180
>gi|195491244|ref|XP_002093479.1| GE21315 [Drosophila yakuba]
gi|194179580|gb|EDW93191.1| GE21315 [Drosophila yakuba]
Length = 652
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 69/88 (78%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVGNLTWWTT+ D+++++R IGV D +VKFFEN +NGQSKGF ++LGSE S+ V+
Sbjct: 94 QLYVGNLTWWTTDQDIANSLRDIGVSDLQEVKFFENRANGQSKGFSVISLGSESSLRAVL 153
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEA 159
++LP E+HG+ P+V YP++ L QFE+
Sbjct: 154 DQLPKKEMHGQAPVVTYPSKQALTQFES 181
>gi|270005896|gb|EFA02344.1| hypothetical protein TcasGA2_TC008014 [Tribolium castaneum]
Length = 651
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 68/88 (77%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNLTWWTT+ D+++A+ IGV DF +VKFFE+ +NGQSKGFC ++LGSE SM L M+
Sbjct: 83 LYVGNLTWWTTDQDIANAVHDIGVNDFHEVKFFEHRANGQSKGFCVISLGSETSMRLCMD 142
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQ 160
LP E++G+ P+V PT+ L FE+Q
Sbjct: 143 HLPKKEINGQNPVVTLPTKQALSNFESQ 170
>gi|189236387|ref|XP_969901.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 620
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 68/88 (77%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNLTWWTT+ D+++A+ IGV DF +VKFFE+ +NGQSKGFC ++LGSE SM L M+
Sbjct: 83 LYVGNLTWWTTDQDIANAVHDIGVNDFHEVKFFEHRANGQSKGFCVISLGSETSMRLCMD 142
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQ 160
LP E++G+ P+V PT+ L FE+Q
Sbjct: 143 HLPKKEINGQNPVVTLPTKQALSNFESQ 170
>gi|443691923|gb|ELT93659.1| hypothetical protein CAPTEDRAFT_113010, partial [Capitella teleta]
Length = 152
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 86/149 (57%), Gaps = 18/149 (12%)
Query: 30 DIDLYDDVTLQP------FPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTT 83
D DLYDDV +P P +SP Y+ +YVGNL+WWTT
Sbjct: 9 DGDLYDDVLTRPSNDSASTPIKEEKSPPAGTPVNYT--------GKKVAIYVGNLSWWTT 60
Query: 84 EADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRK 143
+ D++DAI ++G+ D +++KF+EN NGQSKGF TV GS+ S + M+RLP ELHG+
Sbjct: 61 DQDLTDAISALGISDLLEIKFYENRINGQSKGFATVVFGSDSSSRITMDRLPKKELHGQN 120
Query: 144 PMVAYPTRNVLYQFEAQ----NPLRSRSR 168
P+V + + L QFE Q NP ++ +R
Sbjct: 121 PVVTWANKQTLQQFENQARKDNPQQNGTR 149
>gi|256069988|ref|XP_002571337.1| hypothetical protein [Schistosoma mansoni]
Length = 557
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Query: 29 DDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMS 88
D +LYDDV E++ P+ H YS S A ++YVGNLTWWTT+ D+
Sbjct: 24 DLTELYDDVIAPIKSENSSGVPSMATKHSYS---SSAHPGRRVSVYVGNLTWWTTDLDLL 80
Query: 89 DAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
+A IG+ D I++KF EN NGQSKGFC + GSE+SM L M++ P ++LHG+ P+V
Sbjct: 81 EAASGIGINDVIEIKFHENRQNGQSKGFCVMVFGSEQSMRLAMDKFPKIDLHGQNPVVTS 140
Query: 149 PTRNVLYQFE 158
T++ L FE
Sbjct: 141 YTKHNLSVFE 150
>gi|256069986|ref|XP_002571336.1| hypothetical protein [Schistosoma mansoni]
Length = 567
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Query: 29 DDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMS 88
D +LYDDV E++ P+ H YS S A ++YVGNLTWWTT+ D+
Sbjct: 24 DLTELYDDVIAPIKSENSSGVPSMATKHSYS---SSAHPGRRVSVYVGNLTWWTTDLDLL 80
Query: 89 DAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
+A IG+ D I++KF EN NGQSKGFC + GSE+SM L M++ P ++LHG+ P+V
Sbjct: 81 EAASGIGINDVIEIKFHENRQNGQSKGFCVMVFGSEQSMRLAMDKFPKIDLHGQNPVVTS 140
Query: 149 PTRNVLYQFE 158
T++ L FE
Sbjct: 141 YTKHNLSVFE 150
>gi|350854455|emb|CCD58292.1| hypothetical protein Smp_120640.2 [Schistosoma mansoni]
Length = 557
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Query: 29 DDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMS 88
D +LYDDV E++ P+ H YS S A ++YVGNLTWWTT+ D+
Sbjct: 24 DLTELYDDVIAPIKSENSSGVPSMATKHSYS---SSAHPGRRVSVYVGNLTWWTTDLDLL 80
Query: 89 DAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
+A IG+ D I++KF EN NGQSKGFC + GSE+SM L M++ P ++LHG+ P+V
Sbjct: 81 EAASGIGINDVIEIKFHENRQNGQSKGFCVMVFGSEQSMRLAMDKFPKIDLHGQNPVVTS 140
Query: 149 PTRNVLYQFE 158
T++ L FE
Sbjct: 141 YTKHNLSVFE 150
>gi|350854454|emb|CCD58291.1| hypothetical protein Smp_120640.3 [Schistosoma mansoni]
Length = 556
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Query: 29 DDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMS 88
D +LYDDV E++ P+ H YS S A ++YVGNLTWWTT+ D+
Sbjct: 24 DLTELYDDVIAPIKSENSSGVPSMATKHSYS---SSAHPGRRVSVYVGNLTWWTTDLDLL 80
Query: 89 DAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
+A IG+ D I++KF EN NGQSKGFC + GSE+SM L M++ P ++LHG+ P+V
Sbjct: 81 EAASGIGINDVIEIKFHENRQNGQSKGFCVMVFGSEQSMRLAMDKFPKIDLHGQNPVVTS 140
Query: 149 PTRNVLYQFE 158
T++ L FE
Sbjct: 141 YTKHNLSVFE 150
>gi|350854456|emb|CAZ39021.2| hypothetical protein Smp_120640.1 [Schistosoma mansoni]
Length = 567
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Query: 29 DDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMS 88
D +LYDDV E++ P+ H YS S A ++YVGNLTWWTT+ D+
Sbjct: 24 DLTELYDDVIAPIKSENSSGVPSMATKHSYS---SSAHPGRRVSVYVGNLTWWTTDLDLL 80
Query: 89 DAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
+A IG+ D I++KF EN NGQSKGFC + GSE+SM L M++ P ++LHG+ P+V
Sbjct: 81 EAASGIGINDVIEIKFHENRQNGQSKGFCVMVFGSEQSMRLAMDKFPKIDLHGQNPVVTS 140
Query: 149 PTRNVLYQFE 158
T++ L FE
Sbjct: 141 YTKHNLSVFE 150
>gi|195376167|ref|XP_002046868.1| GJ13124 [Drosophila virilis]
gi|194154026|gb|EDW69210.1| GJ13124 [Drosophila virilis]
Length = 652
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 68/87 (78%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNLTWWTT+ D+S+A+R IGV D +VKFFEN +NGQSKGF ++LGSE S+ V++
Sbjct: 95 LYVGNLTWWTTDQDISNALREIGVNDLQEVKFFENRANGQSKGFSVISLGSEPSLRTVLD 154
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEA 159
+LP E+HG+ +V YP++ L QFE+
Sbjct: 155 QLPKKEMHGQTVVVTYPSKQALTQFES 181
>gi|195013075|ref|XP_001983799.1| GH15377 [Drosophila grimshawi]
gi|193897281|gb|EDV96147.1| GH15377 [Drosophila grimshawi]
Length = 655
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 68/87 (78%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNLTWWTT+ D+S+A+R IGV D +VKFFEN +NGQSKGF ++LGSE S+ V++
Sbjct: 95 LYVGNLTWWTTDQDISNALREIGVNDLQEVKFFENRANGQSKGFSVISLGSEPSLRTVLD 154
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEA 159
+LP E+HG+ +V YP++ L QFE+
Sbjct: 155 QLPKKEMHGQTVVVTYPSKQALTQFES 181
>gi|195126058|ref|XP_002007491.1| GI12981 [Drosophila mojavensis]
gi|193919100|gb|EDW17967.1| GI12981 [Drosophila mojavensis]
Length = 652
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 68/87 (78%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNLTWWTT+ D+S+A+R IGV D +VKFFEN +NGQSKGF ++LGSE S+ V++
Sbjct: 95 LYVGNLTWWTTDQDISNALREIGVNDLQEVKFFENRANGQSKGFSVISLGSEPSLRTVLD 154
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEA 159
+LP E+HG+ +V YP++ L QFE+
Sbjct: 155 QLPKKEMHGQTVVVTYPSKQALTQFES 181
>gi|328723827|ref|XP_003247950.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7-like [Acyrthosiphon pisum]
Length = 391
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 67/88 (76%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L++GNLTWWTT+ D+ D+I GV DF+D+KFFEN NGQ KGFCTVTL SE+S+ +++
Sbjct: 67 LFIGNLTWWTTDQDIIDSIIGTGVHDFVDIKFFENRGNGQFKGFCTVTLESEKSVKQILK 126
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQ 160
+LP +HGRKP+V +P+ + FE++
Sbjct: 127 KLPNELIHGRKPVVTFPSLRAYFMFESE 154
>gi|260827038|ref|XP_002608472.1| hypothetical protein BRAFLDRAFT_60947 [Branchiostoma floridae]
gi|229293823|gb|EEN64482.1| hypothetical protein BRAFLDRAFT_60947 [Branchiostoma floridae]
Length = 467
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 12/147 (8%)
Query: 27 EHDDIDLYDDV-TLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEA 85
E D DLY+DV T P+ G + + + S +Y+GNLTWWTT+A
Sbjct: 23 EFGDADLYNDVITGNAGPDGEGGEGLSKKDDLGVAYQGRRWS-----VYIGNLTWWTTDA 77
Query: 86 DMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPM 145
D+S+AI S+GV D +++KF+EN +NGQSKGFC GSE+S ++M++LP +LHG+ P+
Sbjct: 78 DLSEAILSVGVKDLLEIKFYENRANGQSKGFCVCHFGSEQSPRMLMDKLPRKDLHGQNPV 137
Query: 146 VAYPTRNVLYQFEAQNPLRSRSRRSYR 172
V R L +FE Q SR+S++
Sbjct: 138 VRPCNRQSLNEFEMQ------SRKSFQ 158
>gi|387912668|gb|AFK10203.1| cleavage and polyadenylation specificity factor subunit 7
[Callorhinchus milii]
Length = 500
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 70/98 (71%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNLTWWTT+ D++DA+ S+GV D +++KF+EN +NGQSKGF V LGSE S+ +ME
Sbjct: 80 VYVGNLTWWTTDQDVADAVHSVGVQDLLEIKFYENRANGQSKGFAEVYLGSESSVRRLME 139
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRS 170
LP ELHG+ P V + L QFEAQ+ R +RS
Sbjct: 140 LLPQRELHGQHPEVMPCNKQNLNQFEAQSKKRQNPQRS 177
>gi|405963736|gb|EKC29289.1| Cleavage and polyadenylation specificity factor subunit 6
[Crassostrea gigas]
Length = 257
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 85/151 (56%), Gaps = 8/151 (5%)
Query: 30 DIDLYDDVTLQPFP---EHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEAD 86
D DLY+DV P + P S + +LYVGNLTWWTT+ D
Sbjct: 27 DDDLYNDVITAPSSGDNAEVKQEPDTPTKTTPSVTVPSGYTGRRISLYVGNLTWWTTDQD 86
Query: 87 MSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMV 146
+ D++ +IGV D +++KF+EN +NGQSKGF V +GS+ S L+ E+LP E+HG+ P +
Sbjct: 87 LIDSLAAIGVTDLVEIKFYENRANGQSKGFAVVVVGSDNSSRLIFEKLPKKEIHGQVPQI 146
Query: 147 AYPTRNVLYQFEAQN-----PLRSRSRRSYR 172
+ R L QFEAQ P ++ +R Y+
Sbjct: 147 SNCNRQALSQFEAQARKGEPPAQNVRKRKYK 177
>gi|63055061|ref|NP_001017993.1| cleavage and polyadenylation specificity factor subunit 6 [Danio
rerio]
gi|37681771|gb|AAQ97763.1| cleavage and polyadenylation specific factor 6, 68kDa [Danio rerio]
Length = 558
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 91/157 (57%), Gaps = 17/157 (10%)
Query: 28 HDDIDLYDDVTLQPFPEHTGRSPAR--YRHHRYSHHHSQATSSSHCN-----------LY 74
HD IDLYDDV + P + G +P Y + ++ + + N LY
Sbjct: 27 HDQIDLYDDV-ISPS-ANNGDAPEDRDYLDSLPAPGGNEGSKGAPANVVYTYNGKRIALY 84
Query: 75 VGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
+GNLTWWTT+ D++DAIRSIG+ D +++KFFEN +NGQSKGF V +GS+ S +M+ L
Sbjct: 85 IGNLTWWTTDEDLTDAIRSIGINDVLEIKFFENRANGQSKGFALVCVGSDSSSRKLMDLL 144
Query: 135 PTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRSY 171
ELHG+ P+V + L QFE Q+ R RR +
Sbjct: 145 SKRELHGQNPIVTPCNKQSLSQFEMQS--RKSERRGF 179
>gi|323463106|pdb|3Q2S|C Chain C, Crystal Structure Of Cfim68 RrmCFIM25 COMPLEX
gi|323463107|pdb|3Q2S|D Chain D, Crystal Structure Of Cfim68 RrmCFIM25 COMPLEX
gi|323463110|pdb|3Q2T|C Chain C, Crystal Structure Of Cfim68 RrmCFIM25RNA COMPLEX
gi|323463111|pdb|3Q2T|D Chain D, Crystal Structure Of Cfim68 RrmCFIM25RNA COMPLEX
Length = 229
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 15 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 66
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 67 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 126
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 127 KLMDLLPKRELHGQNPVVTPVNKQFLSQFEMQS 159
>gi|410918765|ref|XP_003972855.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like isoform 2 [Takifugu rubripes]
Length = 482
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 87/147 (59%), Gaps = 15/147 (10%)
Query: 28 HDDIDLYDDVTLQPFPEHTGRSPA--RYRHHRYSHHHSQATSSSHCN-----------LY 74
H+ IDLYDDV + P + G +P Y + ++ S+ N LY
Sbjct: 27 HEQIDLYDDV-ISPS-ANNGDAPEDRDYMDTLPASGGTEGGKSAPPNMPFNYTGKRIALY 84
Query: 75 VGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
+GNLTWWTT+ D+++AIRSIG+ D I++KF+EN +NGQSKGF V +GSE S +ME L
Sbjct: 85 IGNLTWWTTDEDLTEAIRSIGISDVIEIKFYENRANGQSKGFALVCVGSEASSRKLMELL 144
Query: 135 PTLELHGRKPMVAYPTRNVLYQFEAQN 161
P ELH + P+V + L QFE Q+
Sbjct: 145 PKRELHSQNPIVTPCNKQSLSQFEMQS 171
>gi|410918763|ref|XP_003972854.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like isoform 1 [Takifugu rubripes]
Length = 547
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 87/147 (59%), Gaps = 15/147 (10%)
Query: 28 HDDIDLYDDVTLQPFPEHTGRSPA--RYRHHRYSHHHSQATSSSHCN-----------LY 74
H+ IDLYDDV + P + G +P Y + ++ S+ N LY
Sbjct: 27 HEQIDLYDDV-ISPS-ANNGDAPEDRDYMDTLPASGGTEGGKSAPPNMPFNYTGKRIALY 84
Query: 75 VGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
+GNLTWWTT+ D+++AIRSIG+ D I++KF+EN +NGQSKGF V +GSE S +ME L
Sbjct: 85 IGNLTWWTTDEDLTEAIRSIGISDVIEIKFYENRANGQSKGFALVCVGSEASSRKLMELL 144
Query: 135 PTLELHGRKPMVAYPTRNVLYQFEAQN 161
P ELH + P+V + L QFE Q+
Sbjct: 145 PKRELHSQNPIVTPCNKQSLSQFEMQS 171
>gi|226483403|emb|CAX74002.1| cleavage and polyadenylation specific factor 6 [Schistosoma
japonicum]
gi|226483405|emb|CAX74003.1| cleavage and polyadenylation specific factor 6 [Schistosoma
japonicum]
Length = 555
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Query: 29 DDIDLYDDVTLQPFPEHTGRSPARY-RHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADM 87
D +LYDDV E++ P+ H + +S A S ++YVGNLTWWTT+ D+
Sbjct: 24 DLTELYDDVIAPIKSENSSGVPSSMASKHSF---NSAAHSGRRVSVYVGNLTWWTTDLDL 80
Query: 88 SDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVA 147
+A +G+ D +++KF EN NGQSKGFC + GSE+SM L M++ P ++LHG+ P+V
Sbjct: 81 LEAAAGVGINDVVEIKFHENRQNGQSKGFCVMVFGSEQSMRLAMDKFPKIDLHGQNPVVT 140
Query: 148 YPTRNVLYQFE 158
T++ L FE
Sbjct: 141 SYTKHNLSVFE 151
>gi|73968733|ref|XP_531671.2| PREDICTED: uncharacterized protein LOC474441 [Canis lupus
familiaris]
Length = 611
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 86/160 (53%), Gaps = 27/160 (16%)
Query: 21 GEHVSTEHDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHH 61
GE HD IDLYDDV TL P + G+ A + Y+
Sbjct: 43 GEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT-- 100
Query: 62 HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +
Sbjct: 101 ------GKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGV 154
Query: 122 GSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
GSE S +M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 155 GSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 194
>gi|82237275|sp|Q6NWC6.1|CPSF6_DANRE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 6
gi|45768544|gb|AAH67642.1| Cpsf6 protein [Danio rerio]
Length = 545
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 87/147 (59%), Gaps = 15/147 (10%)
Query: 28 HDDIDLYDDVTLQPFPEHTGRSPAR--YRHHRYSHHHSQATSSSHCN-----------LY 74
HD IDLYDDV + P + G +P Y + ++ + + N LY
Sbjct: 27 HDQIDLYDDV-ISPS-ANNGDAPEDRDYLDSLPAPGGNEGSKGAPANVVYTYNGKRIALY 84
Query: 75 VGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
+GNLTWWTT+ D++DAIRSIG+ D +++KFFEN +NGQSKGF V +GS+ S +M+ L
Sbjct: 85 IGNLTWWTTDEDLTDAIRSIGINDVLEIKFFENRANGQSKGFALVCVGSDSSSRKLMDLL 144
Query: 135 PTLELHGRKPMVAYPTRNVLYQFEAQN 161
ELHG+ P+V + L QFE Q+
Sbjct: 145 SKRELHGQNPIVTPCNKQSLSQFEMQS 171
>gi|338726203|ref|XP_001917105.2| PREDICTED: hypothetical protein LOC100059688 [Equus caballus]
Length = 522
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 18 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 69
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 70 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 129
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 130 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 162
>gi|348514969|ref|XP_003445012.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Oreochromis niloticus]
Length = 549
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 86/147 (58%), Gaps = 15/147 (10%)
Query: 28 HDDIDLYDDVTLQPFPEHTGRSPAR--YRHHRYSHHHSQATSSSHCN-----------LY 74
HD IDLYDDV + P + G +P Y + ++ S+ N LY
Sbjct: 27 HDQIDLYDDV-ISPS-ANNGDAPEDRDYLDSLPAPGGTEGGKSAPPNVVYTYTGKRIALY 84
Query: 75 VGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
+GNLTWWTT+ D+++AIR IG+ D +++KFFEN +NGQSKGF V +GSE S +ME L
Sbjct: 85 IGNLTWWTTDEDLTEAIRVIGITDVLEIKFFENRANGQSKGFALVCVGSEASSRKLMELL 144
Query: 135 PTLELHGRKPMVAYPTRNVLYQFEAQN 161
ELHG+ P+V + L QFE Q+
Sbjct: 145 SKRELHGQNPIVTPCNKQSLSQFEMQS 171
>gi|403272130|ref|XP_003927937.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Saimiri boliviensis boliviensis]
Length = 552
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 28 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 79
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 80 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 139
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 140 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 172
>gi|198434835|ref|XP_002121579.1| PREDICTED: similar to Cleavage and polyadenylation specificity
factor subunit 6 [Ciona intestinalis]
Length = 532
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 90/145 (62%), Gaps = 13/145 (8%)
Query: 28 HDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN-------LYVGNLTW 80
++ +DLYDD+ +QP R+ + R + ++ S A S N +YVGNLTW
Sbjct: 24 YNSVDLYDDM-IQP----ASRTNSVSRQNS-TNGISAAPGSLQYNYHGKKVSIYVGNLTW 77
Query: 81 WTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELH 140
WTT+ D+ +AI S+GV D +++KF+EN +NGQSKGF V L SE S +VM++LP +LH
Sbjct: 78 WTTDKDVQNAINSLGVTDLVEIKFYENRANGQSKGFALVHLASETSSRIVMDKLPHKDLH 137
Query: 141 GRKPMVAYPTRNVLYQFEAQNPLRS 165
G+ P+V R L QFE Q+ +S
Sbjct: 138 GQSPVVTPCNRQSLNQFEQQSKAQS 162
>gi|444726503|gb|ELW67034.1| Cleavage and polyadenylation specificity factor subunit 6 [Tupaia
chinensis]
Length = 577
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 52 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 103
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 104 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 163
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 164 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 196
>gi|26338454|dbj|BAC32898.1| unnamed protein product [Mus musculus]
Length = 551
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDKDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQSPVVTPCNKQFLSQFEMQS 171
>gi|351703707|gb|EHB06626.1| Cleavage and polyadenylation specificity factor subunit 6
[Heterocephalus glaber]
Length = 556
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 31 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 82
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 83 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 142
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 143 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 175
>gi|410965104|ref|XP_003989092.1| PREDICTED: uncharacterized protein LOC101101394 [Felis catus]
Length = 590
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 29 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 80
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 81 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 140
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 141 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 173
>gi|305855176|ref|NP_001182260.1| cleavage and polyadenylation specificity factor subunit 6 [Sus
scrofa]
gi|285818464|gb|ADC38905.1| cleavage and polyadenylation specific factor 6 [Sus scrofa]
Length = 551
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|348580755|ref|XP_003476144.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like isoform 1 [Cavia porcellus]
Length = 551
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|13436464|gb|AAH05000.1| CPSF6 protein [Homo sapiens]
Length = 478
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|119617623|gb|EAW97217.1| cleavage and polyadenylation specific factor 6, 68kDa, isoform
CRA_c [Homo sapiens]
Length = 480
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|301773612|ref|XP_002922225.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Ailuropoda melanoleuca]
Length = 551
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYLDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|162329583|ref|NP_008938.2| cleavage and polyadenylation specificity factor subunit 6 [Homo
sapiens]
gi|291389535|ref|XP_002711368.1| PREDICTED: cleavage and polyadenylation specific factor 6, 68 kD
subunit [Oryctolagus cuniculus]
gi|332220785|ref|XP_003259535.1| PREDICTED: uncharacterized protein LOC100589466 isoform 1 [Nomascus
leucogenys]
gi|332840015|ref|XP_003313896.1| PREDICTED: uncharacterized protein LOC452068 [Pan troglodytes]
gi|344266351|ref|XP_003405244.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform 1 [Loxodonta africana]
gi|390467925|ref|XP_003733846.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Callithrix jacchus]
gi|402886798|ref|XP_003906806.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform 1 [Papio anubis]
gi|426373398|ref|XP_004053591.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform 1 [Gorilla gorilla gorilla]
gi|88909266|sp|Q16630.2|CPSF6_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 6; AltName: Full=Cleavage and polyadenylation
specificity factor 68 kDa subunit; Short=CFIm68;
Short=CPSF 68 kDa subunit; AltName: Full=Pre-mRNA
cleavage factor Im 68 kDa subunit; AltName: Full=Protein
HPBRII-4/7
gi|62898868|dbj|BAD97288.1| cleavage and polyadenylation specific factor 6, 68 kD subunit
variant [Homo sapiens]
gi|119617621|gb|EAW97215.1| cleavage and polyadenylation specific factor 6, 68kDa, isoform
CRA_a [Homo sapiens]
gi|158257480|dbj|BAF84713.1| unnamed protein product [Homo sapiens]
gi|296487694|tpg|DAA29807.1| TPA: cleavage and polyadenylation specificity factor subunit 6 [Bos
taurus]
gi|380783421|gb|AFE63586.1| cleavage and polyadenylation specificity factor subunit 6 [Macaca
mulatta]
gi|380783423|gb|AFE63587.1| cleavage and polyadenylation specificity factor subunit 6 [Macaca
mulatta]
gi|383409383|gb|AFH27905.1| cleavage and polyadenylation specificity factor subunit 6 [Macaca
mulatta]
gi|384942278|gb|AFI34744.1| cleavage and polyadenylation specificity factor subunit 6 [Macaca
mulatta]
gi|410220024|gb|JAA07231.1| cleavage and polyadenylation specific factor 6, 68kDa [Pan
troglodytes]
gi|410267354|gb|JAA21643.1| cleavage and polyadenylation specific factor 6, 68kDa [Pan
troglodytes]
gi|410292728|gb|JAA24964.1| cleavage and polyadenylation specific factor 6, 68kDa [Pan
troglodytes]
gi|410355179|gb|JAA44193.1| cleavage and polyadenylation specific factor 6, 68kDa [Pan
troglodytes]
Length = 551
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|119617622|gb|EAW97216.1| cleavage and polyadenylation specific factor 6, 68kDa, isoform
CRA_b [Homo sapiens]
Length = 552
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|118151280|ref|NP_001071574.1| cleavage and polyadenylation specificity factor subunit 6 [Bos
taurus]
gi|122143234|sp|Q0P5D2.1|CPSF6_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 6
gi|112362313|gb|AAI20213.1| Cleavage and polyadenylation specific factor 6, 68kDa [Bos taurus]
Length = 551
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|348580757|ref|XP_003476145.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like isoform 2 [Cavia porcellus]
Length = 588
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|148689891|gb|EDL21838.1| cleavage and polyadenylation specific factor 6, isoform CRA_b [Mus
musculus]
Length = 532
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 7 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 58
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 59 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 118
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 119 KLMDLLPKRELHGQSPVVTPCNKQFLSQFEMQS 151
>gi|148689890|gb|EDL21837.1| cleavage and polyadenylation specific factor 6, isoform CRA_a [Mus
musculus]
gi|148689893|gb|EDL21840.1| cleavage and polyadenylation specific factor 6, isoform CRA_a [Mus
musculus]
Length = 531
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 7 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 58
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 59 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 118
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 119 KLMDLLPKRELHGQSPVVTPCNKQFLSQFEMQS 151
>gi|871299|emb|CAA47752.1| Human pre-mRNA cleavage factor I 68 kDa subunit [Homo sapiens]
gi|871301|emb|CAA47751.1| HPBRII-7 [Homo sapiens]
Length = 551
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|157818555|ref|NP_001100255.1| cleavage and polyadenylation specificity factor subunit 6 [Rattus
norvegicus]
gi|149066887|gb|EDM16620.1| cleavage and polyadenylation specific factor 6, 68kDa (predicted),
isoform CRA_b [Rattus norvegicus]
gi|149066888|gb|EDM16621.1| cleavage and polyadenylation specific factor 6, 68kDa (predicted),
isoform CRA_b [Rattus norvegicus]
gi|149066889|gb|EDM16622.1| cleavage and polyadenylation specific factor 6, 68kDa (predicted),
isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|26339442|dbj|BAC33392.1| unnamed protein product [Mus musculus]
Length = 551
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQSPVVTPCNKQFLSQFEMQS 171
>gi|62909983|ref|NP_001013409.1| cleavage and polyadenylation specificity factor subunit 6 [Mus
musculus]
gi|81911157|sp|Q6NVF9.1|CPSF6_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 6
gi|45768342|gb|AAH68133.1| Cleavage and polyadenylation specific factor 6 [Mus musculus]
gi|74220046|dbj|BAE40600.1| unnamed protein product [Mus musculus]
Length = 551
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQSPVVTPCNKQFLSQFEMQS 171
>gi|148689892|gb|EDL21839.1| cleavage and polyadenylation specific factor 6, isoform CRA_c [Mus
musculus]
Length = 569
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 7 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 58
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 59 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 118
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 119 KLMDLLPKRELHGQSPVVTPCNKQFLSQFEMQS 151
>gi|61372674|gb|AAX43887.1| cleavage and polyadenylation specific factor 6 68kDa [synthetic
construct]
Length = 589
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|417402668|gb|JAA48173.1| Putative mrna cleavage factor i subunit/cpsf subunit [Desmodus
rotundus]
Length = 552
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|149066886|gb|EDM16619.1| cleavage and polyadenylation specific factor 6, 68kDa (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 588
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|417403073|gb|JAA48360.1| Putative mrna cleavage factor i subunit/cpsf subunit [Desmodus
rotundus]
Length = 589
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|47218483|emb|CAF97217.1| unnamed protein product [Tetraodon nigroviridis]
Length = 528
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 87/147 (59%), Gaps = 15/147 (10%)
Query: 28 HDDIDLYDDVTLQPFPEHTGRSPAR--YRHHRYSHHHSQATSSSHCN-----------LY 74
H+ IDLYDDV + P + G +P Y + ++ S+ N LY
Sbjct: 27 HEQIDLYDDV-ISPS-ANNGDAPEDRDYMDALPAPGSAEGGKSAPPNMPFNYTGKRIALY 84
Query: 75 VGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
+GNLTWWTT+ D+++AIRSIG+ D I++KF+EN +NGQSKGF V +GSE S +M+ L
Sbjct: 85 IGNLTWWTTDEDLTEAIRSIGISDVIEIKFYENRANGQSKGFALVCVGSEASSRKLMDLL 144
Query: 135 PTLELHGRKPMVAYPTRNVLYQFEAQN 161
P ELH + P+V + L QFE Q+
Sbjct: 145 PKRELHSQNPIVTPCNKQSLSQFEMQS 171
>gi|440913306|gb|ELR62771.1| Cleavage and polyadenylation specificity factor subunit 6, partial
[Bos grunniens mutus]
Length = 571
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 9 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 60
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 61 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 120
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 121 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 153
>gi|426226735|ref|XP_004007494.1| PREDICTED: uncharacterized protein LOC101114513 [Ovis aries]
Length = 820
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 259 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 310
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 311 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 370
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 371 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 403
>gi|281339057|gb|EFB14641.1| hypothetical protein PANDA_011183 [Ailuropoda melanoleuca]
Length = 571
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 9 HDQIDLYDDVISPSANNGDAPEDRDYLDTLPPTVGDDVGKGAAPNVVYTYT--------G 60
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 61 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 120
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 121 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 153
>gi|355564453|gb|EHH20953.1| hypothetical protein EGK_03914, partial [Macaca mulatta]
gi|355786297|gb|EHH66480.1| hypothetical protein EGM_03483, partial [Macaca fascicularis]
Length = 570
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 9 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 60
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 61 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 120
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 121 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 153
>gi|119617625|gb|EAW97219.1| cleavage and polyadenylation specific factor 6, 68kDa, isoform
CRA_e [Homo sapiens]
Length = 589
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|109097742|ref|XP_001117360.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Macaca mulatta]
gi|344266353|ref|XP_003405245.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform 2 [Loxodonta africana]
gi|402886800|ref|XP_003906807.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform 2 [Papio anubis]
gi|426373400|ref|XP_004053592.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform 2 [Gorilla gorilla gorilla]
gi|12653847|gb|AAH00714.1| CPSF6 protein [Homo sapiens]
gi|119617624|gb|EAW97218.1| cleavage and polyadenylation specific factor 6, 68kDa, isoform
CRA_d [Homo sapiens]
gi|123982688|gb|ABM83085.1| cleavage and polyadenylation specific factor 6, 68kDa [synthetic
construct]
gi|157928386|gb|ABW03489.1| cleavage and polyadenylation specific factor 6, 68kDa [synthetic
construct]
Length = 588
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|288856363|ref|NP_001165832.1| cleavage and polyadenylation specificity factor subunit 6
[Monodelphis domestica]
Length = 551
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 81/149 (54%), Gaps = 19/149 (12%)
Query: 28 HDDIDLYDDVT---------------LQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN 72
HD IDLYDDV + P G + + ++
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDALPPSVGDDVGKGSAPNVVYTYT----GKRIA 82
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S +M+
Sbjct: 83 LYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMD 142
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
LP ELHG+ P+V + L QFE Q+
Sbjct: 143 LLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|354469556|ref|XP_003497194.1| PREDICTED: hypothetical protein LOC100773290 [Cricetulus griseus]
Length = 617
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 56 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 107
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 108 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 167
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 168 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 200
>gi|449282594|gb|EMC89419.1| Cleavage and polyadenylation specificity factor subunit 6, partial
[Columba livia]
Length = 532
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 81/149 (54%), Gaps = 19/149 (12%)
Query: 28 HDDIDLYDDVT---------------LQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN 72
HD IDLYDDV + P G + + ++
Sbjct: 7 HDQIDLYDDVISPSANNGDAPEDRDYMDSLPPSVGDDVGKGAAPNVVYTYT----GKRIA 62
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S +M+
Sbjct: 63 LYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMD 122
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
LP ELHG+ P+V + L QFE Q+
Sbjct: 123 LLPKRELHGQNPVVTPCNKQFLSQFEMQS 151
>gi|326911550|ref|XP_003202121.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like, partial [Meleagris gallopavo]
Length = 513
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 81/149 (54%), Gaps = 19/149 (12%)
Query: 28 HDDIDLYDDVT---------------LQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN 72
HD IDLYDDV + P G + + ++
Sbjct: 7 HDQIDLYDDVISPSANNGDAPEDRDYMDSLPPSVGDDVGKGAAPNVVYTYT----GKRIA 62
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S +M+
Sbjct: 63 LYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMD 122
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
LP ELHG+ P+V + L QFE Q+
Sbjct: 123 LLPKRELHGQNPVVTPCNKQFLSQFEMQS 151
>gi|395537841|ref|XP_003770897.1| PREDICTED: uncharacterized protein LOC100919609 [Sarcophilus
harrisii]
Length = 586
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 81/149 (54%), Gaps = 19/149 (12%)
Query: 28 HDDIDLYDDVT---------------LQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN 72
HD IDLYDDV + P G + + ++
Sbjct: 25 HDQIDLYDDVISPSANNGDAPEDRDYMDALPPSVGDDVGKGSAPNVVYTYT----GKRIA 80
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S +M+
Sbjct: 81 LYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMD 140
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
LP ELHG+ P+V + L QFE Q+
Sbjct: 141 LLPKRELHGQNPVVTPCNKQFLSQFEMQS 169
>gi|86129442|ref|NP_001034360.1| cleavage and polyadenylation specificity factor subunit 6 [Gallus
gallus]
gi|82233874|sp|Q5ZL34.1|CPSF6_CHICK RecName: Full=Cleavage and polyadenylation specificity factor
subunit 6
gi|53130460|emb|CAG31559.1| hypothetical protein RCJMB04_7p13 [Gallus gallus]
Length = 551
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 81/149 (54%), Gaps = 19/149 (12%)
Query: 28 HDDIDLYDDVT---------------LQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN 72
HD IDLYDDV + P G + + ++
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDSLPPSVGDDVGKGAAPNVVYTYT----GKRIA 82
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S +M+
Sbjct: 83 LYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMD 142
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
LP ELHG+ P+V + L QFE Q+
Sbjct: 143 LLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|432942948|ref|XP_004083081.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like isoform 3 [Oryzias latipes]
Length = 475
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 86/148 (58%), Gaps = 17/148 (11%)
Query: 28 HDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--------------L 73
H+ IDLYDDV + P + G +P R + S S + N L
Sbjct: 27 HEQIDLYDDV-ISPS-ANNGDAPED-RDYMDSMPPSGGSDGGKSNPPNVVYTYTGKRIAL 83
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
Y+GNLTWWTT+ D+++AIRS+G+ D +++KFFEN +NGQSKGF V +GSE S +M+
Sbjct: 84 YIGNLTWWTTDEDLTEAIRSVGITDVLEIKFFENRANGQSKGFALVCVGSEGSSRKLMDL 143
Query: 134 LPTLELHGRKPMVAYPTRNVLYQFEAQN 161
L ELHG+ P+V + L QFE Q+
Sbjct: 144 LSKRELHGQNPIVTPCNKQSLSQFEMQS 171
>gi|431892036|gb|ELK02483.1| Cleavage and polyadenylation specificity factor subunit 6 [Pteropus
alecto]
Length = 561
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 112 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 163
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 164 KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 223
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 224 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 256
>gi|432942944|ref|XP_004083079.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like isoform 1 [Oryzias latipes]
Length = 551
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 86/148 (58%), Gaps = 17/148 (11%)
Query: 28 HDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--------------L 73
H+ IDLYDDV + P + G +P R + S S + N L
Sbjct: 27 HEQIDLYDDV-ISPS-ANNGDAPED-RDYMDSMPPSGGSDGGKSNPPNVVYTYTGKRIAL 83
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
Y+GNLTWWTT+ D+++AIRS+G+ D +++KFFEN +NGQSKGF V +GSE S +M+
Sbjct: 84 YIGNLTWWTTDEDLTEAIRSVGITDVLEIKFFENRANGQSKGFALVCVGSEGSSRKLMDL 143
Query: 134 LPTLELHGRKPMVAYPTRNVLYQFEAQN 161
L ELHG+ P+V + L QFE Q+
Sbjct: 144 LSKRELHGQNPIVTPCNKQSLSQFEMQS 171
>gi|395850649|ref|XP_003797891.1| PREDICTED: uncharacterized protein LOC100942110 [Otolemur
garnettii]
Length = 587
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 81/149 (54%), Gaps = 19/149 (12%)
Query: 28 HDDIDLYDDVT---------------LQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN 72
HD IDLYDDV + P G + + ++
Sbjct: 26 HDQIDLYDDVISPSANNGDAPEDRDYMDALPPTVGDDVGKGAAPNVVYTYT----GKRIA 81
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S +M+
Sbjct: 82 LYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSETSSKKLMD 141
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
LP ELHG+ P+V + L QFE Q+
Sbjct: 142 LLPKRELHGQNPVVTPCNKQFLSQFEMQS 170
>gi|432942946|ref|XP_004083080.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like isoform 2 [Oryzias latipes]
Length = 564
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 86/148 (58%), Gaps = 17/148 (11%)
Query: 28 HDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--------------L 73
H+ IDLYDDV + P + G +P R + S S + N L
Sbjct: 27 HEQIDLYDDV-ISP-SANNGDAPED-RDYMDSMPPSGGSDGGKSNPPNVVYTYTGKRIAL 83
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
Y+GNLTWWTT+ D+++AIRS+G+ D +++KFFEN +NGQSKGF V +GSE S +M+
Sbjct: 84 YIGNLTWWTTDEDLTEAIRSVGITDVLEIKFFENRANGQSKGFALVCVGSEGSSRKLMDL 143
Query: 134 LPTLELHGRKPMVAYPTRNVLYQFEAQN 161
L ELHG+ P+V + L QFE Q+
Sbjct: 144 LSKRELHGQNPIVTPCNKQSLSQFEMQS 171
>gi|449481596|ref|XP_002189508.2| PREDICTED: uncharacterized protein LOC100220791 [Taeniopygia
guttata]
Length = 575
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 81/149 (54%), Gaps = 19/149 (12%)
Query: 28 HDDIDLYDDVT---------------LQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN 72
HD IDLYDDV + P G + + ++
Sbjct: 50 HDQIDLYDDVISPSANNGDAPEDRDYMDSLPPSVGDDVGKGAAPNVVYTYT----GKRIA 105
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKG+ V +GSE S +M+
Sbjct: 106 LYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGYALVGVGSEASSKKLMD 165
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
LP ELHG+ P+V + L QFE Q+
Sbjct: 166 LLPKRELHGQNPVVTPCNKQFLSQFEMQS 194
>gi|156371737|ref|XP_001628918.1| predicted protein [Nematostella vectensis]
gi|156215907|gb|EDO36855.1| predicted protein [Nematostella vectensis]
Length = 502
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 94/170 (55%), Gaps = 19/170 (11%)
Query: 2 DLYDDAILGMGPTDTNTSPGEHVSTEH-DDIDLYDDVTLQPFPEHTGRSPARYRHHRYSH 60
DLYDD + TS + E I Y +QP E + + Y + Y+
Sbjct: 30 DLYDDTL--------TTSAEQQAEDEALQGIVSYSGDLVQPPTEASSGPGSNYEYKSYTT 81
Query: 61 HHSQATSSSHCN----------LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASN 110
H ++ +S LYVGNLTWWTT+ +++A++ GV D I++KFF+N +N
Sbjct: 82 VHPKSAASLAAQSSYERPRGKPLYVGNLTWWTTDQQLTEALQECGVTDLINIKFFDNRTN 141
Query: 111 GQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQ 160
GQSKGF + LGS++S+ +V ERLP ++ G+ P+V T+ L++FEAQ
Sbjct: 142 GQSKGFAMIELGSDKSIEMVTERLPKFDIEGQNPVVTPATKQHLHEFEAQ 191
>gi|444732733|gb|ELW73008.1| Cleavage and polyadenylation specificity factor subunit 6 [Tupaia
chinensis]
Length = 552
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 84/152 (55%), Gaps = 24/152 (15%)
Query: 28 HDDIDLYDDV------------------TLQPFPEHTGRSPARYRHHRYSHHHSQATSSS 69
HD IDLYDDV TL P + + Y++ + T
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDCDYMDTLPPTVGDDVGNKGAAPNVVYTYTGKRIT--- 83
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 84 ---LYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVDVGSEASSKK 140
Query: 130 VMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 141 LMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 172
>gi|148224239|ref|NP_001086745.1| cleavage and polyadenylation specificity factor subunit 6 [Xenopus
laevis]
gi|82235770|sp|Q6DDW4.1|CPSF6_XENLA RecName: Full=Cleavage and polyadenylation specificity factor
subunit 6
gi|50417498|gb|AAH77388.1| Cpsf6-prov protein [Xenopus laevis]
Length = 548
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 85/147 (57%), Gaps = 15/147 (10%)
Query: 28 HDDIDLYDDVTLQPFPEHTGRSPA--RYRHHRYSHHHSQATSSSHCN-----------LY 74
HD I+LY+DV L P + G +P Y + + S N LY
Sbjct: 27 HDQIELYEDV-LSPS-ANNGDAPEDRDYMDNLAASVGDDVVKGSVPNIVYTYTGKRIALY 84
Query: 75 VGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
+GNLTWWTT+ D++DA+ S+GV D +++KFFEN +NGQSKGF + + SE S +M+ L
Sbjct: 85 IGNLTWWTTDEDLTDAVHSLGVNDILEIKFFENRANGQSKGFALICVSSESSSKKLMDLL 144
Query: 135 PTLELHGRKPMVAYPTRNVLYQFEAQN 161
P E+HG+KP+V + L QFE Q+
Sbjct: 145 PKREMHGQKPIVTPCNKQFLSQFEMQS 171
>gi|62857453|ref|NP_001015917.1| cleavage and polyadenylation specific factor 6, 68kDa [Xenopus
(Silurana) tropicalis]
gi|89268093|emb|CAJ83785.1| cleavage and polyadenylation specific factor 6, 68kDa [Xenopus
(Silurana) tropicalis]
Length = 547
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 65/89 (73%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNLTWWTT+ D++DA+ S+GV D +++KFFEN +NGQSKGF + + SE S +M+
Sbjct: 83 LYIGNLTWWTTDEDLTDAVHSLGVNDILEIKFFENRANGQSKGFALICVSSESSSKKLMD 142
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
LP E+HG+KP+V + L QFE Q+
Sbjct: 143 LLPKREMHGQKPIVTPCNKQFLSQFEMQS 171
>gi|432096556|gb|ELK27203.1| Cleavage and polyadenylation specificity factor subunit 6 [Myotis
davidii]
Length = 500
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 65/89 (73%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S +M+
Sbjct: 31 LYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMD 90
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
LP ELHG+ P+V + L QFE Q+
Sbjct: 91 LLPKRELHGQNPVVTPCNKQFLSQFEMQS 119
>gi|344239912|gb|EGV96015.1| Cleavage and polyadenylation specificity factor subunit 6
[Cricetulus griseus]
Length = 500
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 65/89 (73%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S +M+
Sbjct: 31 LYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMD 90
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
LP ELHG+ P+V + L QFE Q+
Sbjct: 91 LLPKRELHGQNPVVTPCNKQFLSQFEMQS 119
>gi|358254749|dbj|GAA56285.1| cleavage and polyadenylation specificity factor subunit 6/7,
partial [Clonorchis sinensis]
Length = 810
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 79/146 (54%), Gaps = 12/146 (8%)
Query: 32 DLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAI 91
+LYDDV +T P SH S YVGNLTWWTT+ D+ +
Sbjct: 7 ELYDDVIAPGAQSNTASKPESPVVGFASH------SGKRVETYVGNLTWWTTDQDLLETT 60
Query: 92 RSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTR 151
++G+ D +++KF EN NGQSKGFC + GS++S ME+LP E+HG+ P+V + T+
Sbjct: 61 NALGINDVVEIKFHENRQNGQSKGFCVMVFGSDQSARTAMEKLPKTEIHGQNPVVTHCTK 120
Query: 152 NVLYQFE------AQNPLRSRSRRSY 171
+ L FE Q RSRS SY
Sbjct: 121 HNLSIFEKAAGGDGQPTTRSRSDESY 146
>gi|197101387|ref|NP_001127689.1| cleavage and polyadenylation specificity factor subunit 6 [Pongo
abelii]
gi|75070329|sp|Q5NVH8.1|CPSF6_PONAB RecName: Full=Cleavage and polyadenylation specificity factor
subunit 6
gi|56403796|emb|CAI29685.1| hypothetical protein [Pongo abelii]
Length = 552
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 83/153 (54%), Gaps = 27/153 (17%)
Query: 28 HDDIDLYDDV------------------TLQP-FPEHTGRSPARYRHHRYSHHHSQATSS 68
HD IDLYDDV TL P + G+ A + Y+
Sbjct: 27 HDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYT--------G 78
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
LY+GNLT WTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 79 KRIALYIGNLTRWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK 138
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+M+ LP ELHG+ P+V + L QFE Q+
Sbjct: 139 KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS 171
>gi|390342237|ref|XP_782654.3| PREDICTED: uncharacterized protein LOC577326 [Strongylocentrotus
purpuratus]
Length = 943
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 22 EHVSTEHDDIDLYDDVTLQPF------PEHT--GRSPARYRHHRYSHHHSQATSSS--HC 71
E ++ +DLYDDV P P++ G ++ R H H+S S S
Sbjct: 23 EQYNSSSGGVDLYDDVITAPSDGGGGKPQNVSGGGDASKARRHSSDQHNSNQPSYSGKRV 82
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+LYVGNLTWWTT+ D+ A+ +GV D ++KFFEN +NGQSKGF V + S+ S L+M
Sbjct: 83 SLYVGNLTWWTTDMDLKQAVNELGVKDLHEIKFFENRANGQSKGFAAVHVSSDNSYRLLM 142
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFE 158
L E+HG+ PMV + QF+
Sbjct: 143 HNLGKKEIHGQLPMVTQYNKQNFGQFD 169
>gi|195539805|gb|AAI67918.1| hypothetical protein LOC548671 [Xenopus (Silurana) tropicalis]
Length = 547
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 64/89 (71%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNLTWWTT+ D++DA+ S+GV D +++KFFEN +N QSKGF + + SE S +M+
Sbjct: 83 LYIGNLTWWTTDEDLTDAVHSLGVNDILEIKFFENRANCQSKGFALICVSSESSSKKLMD 142
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
LP E+HG+KP+V + L QFE Q+
Sbjct: 143 LLPKREMHGQKPIVTPCNKQFLSQFEMQS 171
>gi|310942952|pdb|3P5T|L Chain L, Cfim25-Cfim68 Complex
gi|310942953|pdb|3P5T|M Chain M, Cfim25-Cfim68 Complex
gi|310942954|pdb|3P5T|N Chain N, Cfim25-Cfim68 Complex
gi|310942955|pdb|3P5T|O Chain O, Cfim25-Cfim68 Complex
gi|310942956|pdb|3P5T|P Chain P, Cfim25-Cfim68 Complex
gi|310942957|pdb|3P5T|Q Chain Q, Cfim25-Cfim68 Complex
gi|310942964|pdb|3P6Y|C Chain C, Cf Im25-Cf Im68-Uguaa Complex
gi|310942965|pdb|3P6Y|D Chain D, Cf Im25-Cf Im68-Uguaa Complex
gi|310942968|pdb|3P6Y|G Chain G, Cf Im25-Cf Im68-Uguaa Complex
gi|310942969|pdb|3P6Y|H Chain H, Cf Im25-Cf Im68-Uguaa Complex
gi|310942972|pdb|3P6Y|K Chain K, Cf Im25-Cf Im68-Uguaa Complex
gi|310942973|pdb|3P6Y|L Chain L, Cf Im25-Cf Im68-Uguaa Complex
gi|310942976|pdb|3P6Y|O Chain O, Cf Im25-Cf Im68-Uguaa Complex
gi|310942977|pdb|3P6Y|P Chain P, Cf Im25-Cf Im68-Uguaa Complex
Length = 90
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 58/74 (78%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S +M+
Sbjct: 4 LYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMD 63
Query: 133 RLPTLELHGRKPMV 146
LP ELHG+ P+V
Sbjct: 64 LLPKRELHGQNPVV 77
>gi|313239073|emb|CBY14054.1| unnamed protein product [Oikopleura dioica]
Length = 242
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 29 DDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMS 88
D++DLY DV P +Y +H Q TSS ++YVGNLTWWT++ D+
Sbjct: 3 DEVDLYKDVDKIP----------KYEAFEKMNHFEQITSSI-VSIYVGNLTWWTSDFDLE 51
Query: 89 DAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
AIR +GV D +DV E +NGQSKGF V + +E S VME+LP EL+G +P+V
Sbjct: 52 MAIRRLGVYDILDVYIHECNANGQSKGFARVDVKTEASAKQVMEKLPRGELNGVRPVVTP 111
Query: 149 PTRNVLYQF 157
+ L +F
Sbjct: 112 ANKGTLKEF 120
>gi|301781694|ref|XP_002926261.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7-like [Ailuropoda melanoleuca]
gi|345783290|ref|XP_533274.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 3 [Canis lupus familiaris]
gi|410974081|ref|XP_003993476.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 2 [Felis catus]
Length = 462
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 94/188 (50%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ S A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKSPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ P
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIP 177
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 178 PRAHSRDS 185
>gi|74354623|gb|AAI02468.1| FLJ12529 protein [Bos taurus]
Length = 237
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 94/188 (50%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ P
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIP 177
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 178 PRAHSRDS 185
>gi|348560391|ref|XP_003465997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7-like [Cavia porcellus]
Length = 462
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 93/188 (49%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQAT-------SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A S +YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRSRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ P
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIP 177
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 178 PRAHSRDS 185
>gi|355680870|gb|AER96666.1| cleavage and polyadenylation specific factor 7, 59kDa [Mustela
putorius furo]
Length = 488
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 92/186 (49%), Gaps = 28/186 (15%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 26 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 75
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ S A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 76 EPSPKPNNKSPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 135
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSR 166
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ +R
Sbjct: 136 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----AR 191
Query: 167 SRRSYR 172
R R
Sbjct: 192 KRECVR 197
>gi|149725208|ref|XP_001502146.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 1 [Equus caballus]
Length = 462
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 94/188 (50%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ P
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIP 177
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 178 PRAHSRDS 185
>gi|345783292|ref|XP_003432395.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 1 [Canis lupus familiaris]
gi|345783294|ref|XP_003432396.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 2 [Canis lupus familiaris]
gi|410974079|ref|XP_003993475.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 1 [Felis catus]
gi|410974083|ref|XP_003993477.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 3 [Felis catus]
Length = 471
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 92/186 (49%), Gaps = 28/186 (15%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ S A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKSPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSR 166
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ +R
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----AR 173
Query: 167 SRRSYR 172
R R
Sbjct: 174 KRECVR 179
>gi|344296000|ref|XP_003419698.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7-like [Loxodonta africana]
Length = 462
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 94/188 (50%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ P
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIP 177
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 178 PRAHSRDS 185
>gi|194679606|ref|XP_881359.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 4 [Bos taurus]
gi|297492033|ref|XP_002699327.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 1 [Bos taurus]
gi|426251854|ref|XP_004019636.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 2 [Ovis aries]
gi|296471671|tpg|DAA13786.1| TPA: cleavage and polyadenylation specific factor 7, 59kDa [Bos
taurus]
Length = 462
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 94/188 (50%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ P
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIP 177
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 178 PRAHSRDS 185
>gi|194377642|dbj|BAG57769.1| unnamed protein product [Homo sapiens]
Length = 462
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 94/188 (50%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATPQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ P
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIP 177
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 178 PRAHSRDS 185
>gi|190691157|gb|ACE87353.1| pre-mRNA cleavage factor I, 59 kDa subunit protein [synthetic
construct]
Length = 462
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 94/188 (50%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ P
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIP 177
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 178 PRAHSRDS 185
>gi|395852540|ref|XP_003798796.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 1 [Otolemur garnettii]
gi|431910402|gb|ELK13475.1| Cleavage and polyadenylation specificity factor subunit 7 [Pteropus
alecto]
Length = 462
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 94/188 (50%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ P
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIP 177
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 178 PRAHSRDS 185
>gi|217035107|ref|NP_001136037.1| cleavage and polyadenylation specificity factor subunit 7 isoform 3
[Homo sapiens]
gi|332249892|ref|XP_003274088.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 1 [Nomascus leucogenys]
gi|332836628|ref|XP_003313120.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 1 [Pan troglodytes]
gi|390470641|ref|XP_003734324.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 2 [Callithrix jacchus]
gi|395742669|ref|XP_002821727.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 [Pongo abelii]
gi|397516572|ref|XP_003828498.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 1 [Pan paniscus]
gi|402893176|ref|XP_003909777.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 1 [Papio anubis]
gi|119594351|gb|EAW73945.1| pre-mRNA cleavage factor I, 59 kDa subunit [Homo sapiens]
Length = 462
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 94/188 (50%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ P
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIP 177
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 178 PRAHSRDS 185
>gi|311247524|ref|XP_003122682.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 1 [Sus scrofa]
Length = 462
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 94/188 (50%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ P
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIP 177
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 178 PRAHSRDS 185
>gi|190689789|gb|ACE86669.1| pre-mRNA cleavage factor I, 59 kDa subunit protein [synthetic
construct]
Length = 462
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 94/188 (50%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ P
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIP 177
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 178 PRAHSRDS 185
>gi|31873900|emb|CAD97884.1| hypothetical protein [Homo sapiens]
Length = 500
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 94/188 (50%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 46 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 95
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 96 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 155
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ P
Sbjct: 156 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIP 215
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 216 PRAHSRDS 223
>gi|444513061|gb|ELV10253.1| Cleavage and polyadenylation specificity factor subunit 7 [Tupaia
chinensis]
Length = 361
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 92/186 (49%), Gaps = 28/186 (15%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSR 166
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ +R
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----AR 173
Query: 167 SRRSYR 172
R R
Sbjct: 174 KRECVR 179
>gi|417411008|gb|JAA51966.1| Putative mrna cleavage factor i subunit/cpsf subunit, partial
[Desmodus rotundus]
Length = 475
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 93/188 (49%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS--PARYRH 55
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 21 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 70
Query: 56 HRYSHHHSQATS---------SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
+S+ + + +YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 71 EPSPKPNSKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 130
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V T+ L QFEAQ P
Sbjct: 131 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATKQNLSQFEAQARKRIP 190
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 191 PRAHSRES 198
>gi|395852542|ref|XP_003798797.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 2 [Otolemur garnettii]
Length = 471
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 92/186 (49%), Gaps = 28/186 (15%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSR 166
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ +R
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----AR 173
Query: 167 SRRSYR 172
R R
Sbjct: 174 KRECVR 179
>gi|209862881|ref|NP_001129512.1| cleavage and polyadenylation specificity factor subunit 7 isoform 2
[Homo sapiens]
gi|114637904|ref|XP_508475.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 3 [Pan troglodytes]
gi|296218444|ref|XP_002755455.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 1 [Callithrix jacchus]
gi|332249894|ref|XP_003274089.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 2 [Nomascus leucogenys]
gi|390470643|ref|XP_003734325.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 3 [Callithrix jacchus]
gi|390470645|ref|XP_003734326.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 4 [Callithrix jacchus]
gi|397516574|ref|XP_003828499.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 2 [Pan paniscus]
gi|402893178|ref|XP_003909778.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 2 [Papio anubis]
gi|402893180|ref|XP_003909779.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 3 [Papio anubis]
gi|402893182|ref|XP_003909780.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 4 [Papio anubis]
gi|403255028|ref|XP_003920251.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 [Saimiri boliviensis boliviensis]
gi|74759932|sp|Q8N684.1|CPSF7_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 7; AltName: Full=Cleavage and polyadenylation
specificity factor 59 kDa subunit; Short=CFIm59;
Short=CPSF 59 kDa subunit; AltName: Full=Pre-mRNA
cleavage factor Im 59 kDa subunit
gi|22450806|gb|AAH18135.1| Pre-mRNA cleavage factor I, 59 kDa subunit [Homo sapiens]
gi|27526485|emb|CAC81661.1| pre-mRNA cleavage factor I, 59 kDa subunit [Homo sapiens]
gi|193788372|dbj|BAG53266.1| unnamed protein product [Homo sapiens]
gi|261861452|dbj|BAI47248.1| cleavage and polyadenylation specific factor 7, 59kDa [synthetic
construct]
Length = 471
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 92/186 (49%), Gaps = 28/186 (15%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSR 166
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ +R
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----AR 173
Query: 167 SRRSYR 172
R R
Sbjct: 174 KRECVR 179
>gi|338712474|ref|XP_003362717.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 2 [Equus caballus]
Length = 471
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 92/186 (49%), Gaps = 28/186 (15%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSR 166
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ +R
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----AR 173
Query: 167 SRRSYR 172
R R
Sbjct: 174 KRECVR 179
>gi|440893102|gb|ELR46005.1| Cleavage and polyadenylation specificity factor subunit 7, partial
[Bos grunniens mutus]
Length = 489
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 92/186 (49%), Gaps = 28/186 (15%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 26 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 75
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 76 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 135
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSR 166
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ +R
Sbjct: 136 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----AR 191
Query: 167 SRRSYR 172
R R
Sbjct: 192 KRECVR 197
>gi|358419678|ref|XP_003584298.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 [Bos taurus]
gi|358419680|ref|XP_003584299.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 [Bos taurus]
gi|359081146|ref|XP_003588081.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 2 [Bos taurus]
gi|359081149|ref|XP_003588082.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 3 [Bos taurus]
gi|426251852|ref|XP_004019635.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 1 [Ovis aries]
Length = 471
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 92/186 (49%), Gaps = 28/186 (15%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSR 166
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ +R
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----AR 173
Query: 167 SRRSYR 172
R R
Sbjct: 174 KRECVR 179
>gi|311247526|ref|XP_003122683.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 2 [Sus scrofa]
Length = 471
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 92/186 (49%), Gaps = 28/186 (15%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSR 166
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ +R
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----AR 173
Query: 167 SRRSYR 172
R R
Sbjct: 174 KRECVR 179
>gi|334331803|ref|XP_003341523.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 2 [Monodelphis domestica]
Length = 462
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS--PARYRH 55
+D+Y D P +N D IDLYDDV + QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFSNA----------DQIDLYDDVLAASSQPSDDRSSSAEPPPPIRQ 57
Query: 56 HRYSHHHSQATS---------SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
+ +S++ + + +YVG+ +WWTT+ + IRS+GV D +++KF E
Sbjct: 58 EQSPKPNSKSPAILYTYSGLRNKRAAVYVGSFSWWTTDQQLIQIIRSVGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ P
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKILNGEKVDVRLATRQNLSQFEAQARKRVP 177
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 178 PRAHSRDS 185
>gi|326919937|ref|XP_003206233.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 7-like [Meleagris gallopavo]
Length = 427
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 84/160 (52%), Gaps = 18/160 (11%)
Query: 29 DDIDLYDDV-------------TLQPFPEHTGRSPARYRHHRYSHHHS-QATSSSHCNLY 74
D +DLYDDV +L+P PE P + + ++ + +Y
Sbjct: 26 DQMDLYDDVLTASSQPPESRTSSLEPTPEIRQEPPPKLNSKAPAILYTYSGLRNKRAAVY 85
Query: 75 VGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
VG+ +WWTT+ + IRS+GV D +++KF EN +NGQSKG+ V + SE S+ ++E L
Sbjct: 86 VGSFSWWTTDQQLIQTIRSVGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELL 145
Query: 135 PTLELHGRKPMVAYPTRNVLYQFEAQN----PLRSRSRRS 170
P L+G K V TR L QFEAQ P R+ SR S
Sbjct: 146 PGKVLNGDKVEVRLATRQNLSQFEAQARKRVPPRAHSRDS 185
>gi|332249896|ref|XP_003274090.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 3 [Nomascus leucogenys]
Length = 514
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 92/186 (49%), Gaps = 28/186 (15%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 51 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 100
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 101 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 160
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSR 166
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ +R
Sbjct: 161 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----AR 216
Query: 167 SRRSYR 172
R R
Sbjct: 217 KRECVR 222
>gi|217035102|ref|NP_079087.3| cleavage and polyadenylation specificity factor subunit 7 isoform 1
[Homo sapiens]
Length = 514
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 92/186 (49%), Gaps = 28/186 (15%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 51 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 100
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 101 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 160
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSR 166
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ +R
Sbjct: 161 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----AR 216
Query: 167 SRRSYR 172
R R
Sbjct: 217 KRECVR 222
>gi|332836631|ref|XP_003313121.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 2 [Pan troglodytes]
Length = 514
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 92/186 (49%), Gaps = 28/186 (15%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 51 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 100
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 101 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 160
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSR 166
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ +R
Sbjct: 161 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----AR 216
Query: 167 SRRSYR 172
R R
Sbjct: 217 KRECVR 222
>gi|351699153|gb|EHB02072.1| Cleavage and polyadenylation specificity factor subunit 7
[Heterocephalus glaber]
Length = 466
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 92/193 (47%), Gaps = 42/193 (21%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTL--------------------- 39
+D+Y D P NT D IDLYDDV
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSAEPPPPILQ 57
Query: 40 QPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDF 99
+P P+ ++PA + YS S+ + +YVG+ +WWTT+ + IRSIGV D
Sbjct: 58 EPSPKPNNKTPAIL--YTYSGLRSRRAA-----VYVGSFSWWTTDQQLIQVIRSIGVYDV 110
Query: 100 IDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEA 159
+++KF EN +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEA
Sbjct: 111 VELKFAENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEA 170
Query: 160 QNPLRSRSRRSYR 172
Q +R R R
Sbjct: 171 Q----ARKRECVR 179
>gi|62079221|ref|NP_001014267.1| cleavage and polyadenylation specificity factor subunit 7 [Rattus
norvegicus]
gi|81910351|sp|Q5XI29.1|CPSF7_RAT RecName: Full=Cleavage and polyadenylation specificity factor
subunit 7
gi|53734290|gb|AAH83864.1| Similar to RIKEN cDNA 5730453I16 [Rattus norvegicus]
Length = 462
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 93/175 (53%), Gaps = 22/175 (12%)
Query: 1 MDLYDDAILGMG-PTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYS 59
+DLYDD + P+D +S STE V +P P+ ++PA + YS
Sbjct: 28 IDLYDDVLTAASQPSDDRSS-----STEPPP-----PVRQEPAPKPNNKTPAIL--YTYS 75
Query: 60 HHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTV 119
S+ +YVG+ +WWTT+ + IRSIGV D +++KF EN +NGQSKG+ V
Sbjct: 76 GLRSR-----RAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEV 130
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----PLRSRSRRS 170
+ SE S+ ++E LP L+G K V TR L QFEAQ P R+ SR S
Sbjct: 131 VVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIPPRAHSRDS 185
>gi|363733967|ref|XP_003641319.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7-like isoform 1 [Gallus gallus]
Length = 462
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 93/174 (53%), Gaps = 20/174 (11%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSH 60
MDLYDD + T ++ P S+ ++ ++ +P P+ ++PA + YS
Sbjct: 28 MDLYDDVL-----TASSQPPESRTSS----LEPPPEIRQEPPPKPNSKAPAIL--YTYS- 75
Query: 61 HHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVT 120
+ +YVG+ +WWTT+ + IRS+GV D +++KF EN +NGQSKG+ V
Sbjct: 76 ----GLRNKRAAVYVGSFSWWTTDQQLIQTIRSVGVYDVVELKFAENRANGQSKGYAEVV 131
Query: 121 LGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----PLRSRSRRS 170
+ SE S+ ++E LP L+G K V TR L QFEAQ P R+ SR S
Sbjct: 132 VASENSVHKLLELLPGKVLNGDKVEVRLATRQNLSQFEAQARKRVPPRAHSRDS 185
>gi|256665245|ref|NP_001157744.1| cleavage and polyadenylation specificity factor subunit 7 isoform 2
[Mus musculus]
gi|24416453|gb|AAH38812.1| 5730453I16Rik protein [Mus musculus]
Length = 462
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 93/175 (53%), Gaps = 22/175 (12%)
Query: 1 MDLYDDAILGMG-PTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYS 59
+DLYDD + P+D +S STE V +P P+ ++PA + YS
Sbjct: 28 IDLYDDVLTAASQPSDDRSS-----STEPPP-----PVRQEPAPKPNNKTPAIL--YTYS 75
Query: 60 HHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTV 119
S+ +YVG+ +WWTT+ + IRSIGV D +++KF EN +NGQSKG+ V
Sbjct: 76 GLRSR-----RAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEV 130
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----PLRSRSRRS 170
+ SE S+ ++E LP L+G K V TR L QFEAQ P R+ SR S
Sbjct: 131 VVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIPPRAHSRDS 185
>gi|147902071|ref|NP_001090367.1| pre-mRNA cleavage factor I, 59 kDa subunit [Xenopus laevis]
gi|114107885|gb|AAI23247.1| MGC154500 protein [Xenopus laevis]
Length = 464
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
++Y+GN +WWTT+ + IRS+G+ D +++KF EN +NGQSKGF VTL SE SM+L+
Sbjct: 93 VSMYIGNFSWWTTDQQLLTLIRSLGIKDHVEIKFAENRANGQSKGFAEVTLSSESSMNLI 152
Query: 131 MERLPTLELHGRKPMVAYPTRNVLYQFEA----QNPLRSRSRRS 170
+E LP +L+G+K V R L FEA + P R+ S+ S
Sbjct: 153 LEHLPQKKLNGKKLDVRPANRQNLSFFEALSRKKIPPRANSKSS 196
>gi|354502499|ref|XP_003513323.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 2 [Cricetulus griseus]
Length = 462
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 85/160 (53%), Gaps = 18/160 (11%)
Query: 29 DDIDLYDDV---TLQPFPEHTGRS----PARYRHHRYSHHHSQAT-------SSSHCNLY 74
D IDLYDDV T QP + + + P R ++ + A S +Y
Sbjct: 26 DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQEPSPKPNNKTPAILYTYSGLRSRRAAVY 85
Query: 75 VGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
VG+ +WWTT+ + IRSIGV D +++KF EN +NGQSKG+ V + SE S+ ++E L
Sbjct: 86 VGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELL 145
Query: 135 PTLELHGRKPMVAYPTRNVLYQFEAQN----PLRSRSRRS 170
P L+G K V TR L QFEAQ P R+ SR S
Sbjct: 146 PGKVLNGEKVDVRPATRQNLSQFEAQARKRIPPRAHSRDS 185
>gi|126333398|ref|XP_001367827.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 1 [Monodelphis domestica]
Length = 471
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 93/186 (50%), Gaps = 28/186 (15%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS--PARYRH 55
+D+Y D P +N D IDLYDDV + QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFSNA----------DQIDLYDDVLAASSQPSDDRSSSAEPPPPIRQ 57
Query: 56 HRYSHHHSQATS---------SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
+ +S++ + + +YVG+ +WWTT+ + IRS+GV D +++KF E
Sbjct: 58 EQSPKPNSKSPAILYTYSGLRNKRAAVYVGSFSWWTTDQQLIQIIRSVGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSR 166
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ +R
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKILNGEKVDVRLATRQNLSQFEAQ----AR 173
Query: 167 SRRSYR 172
R R
Sbjct: 174 KRECVR 179
>gi|344249372|gb|EGW05476.1| Cleavage and polyadenylation specificity factor subunit 7
[Cricetulus griseus]
Length = 361
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 83/158 (52%), Gaps = 18/158 (11%)
Query: 29 DDIDLYDDV---TLQPFPEHTGRS----PARYRHHRYSHHHSQAT-------SSSHCNLY 74
D IDLYDDV T QP + + + P R ++ + A S +Y
Sbjct: 26 DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQEPSPKPNNKTPAILYTYSGLRSRRAAVY 85
Query: 75 VGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
VG+ +WWTT+ + IRSIGV D +++KF EN +NGQSKG+ V + SE S+ ++E L
Sbjct: 86 VGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELL 145
Query: 135 PTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRSYR 172
P L+G K V TR L QFEAQ +R R R
Sbjct: 146 PGKVLNGEKVDVRPATRQNLSQFEAQ----ARKRECVR 179
>gi|417411098|gb|JAA51999.1| Putative mrna cleavage factor i subunit/cpsf subunit, partial
[Desmodus rotundus]
Length = 484
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 91/186 (48%), Gaps = 28/186 (15%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS--PARYRH 55
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 21 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 70
Query: 56 HRYSHHHSQATS---------SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
+S+ + + +YVG+ +WWTT+ + IRSIGV D +++KF E
Sbjct: 71 EPSPKPNSKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 130
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSR 166
N +NGQSKG+ V + SE S+ ++E LP L+G K V T+ L QFEAQ +R
Sbjct: 131 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATKQNLSQFEAQ----AR 186
Query: 167 SRRSYR 172
R R
Sbjct: 187 KRECVR 192
>gi|281345360|gb|EFB20944.1| hypothetical protein PANDA_015893 [Ailuropoda melanoleuca]
Length = 453
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 84/158 (53%), Gaps = 18/158 (11%)
Query: 29 DDIDLYDDV---TLQPFPEHTGRS----PARYRHHRYSHHHSQATSSSHCNL-------Y 74
D IDLYDDV T QP + + + P R ++ S A ++ L Y
Sbjct: 8 DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQEPSPKPNNKSPAILYTYSGLRNRRAAVY 67
Query: 75 VGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
VG+ +WWTT+ + IRSIGV D +++KF EN +NGQSKG+ V + SE S+ ++E L
Sbjct: 68 VGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELL 127
Query: 135 PTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRSYR 172
P L+G K V TR L QFEAQ +R R R
Sbjct: 128 PGKVLNGEKVDVRPATRQNLSQFEAQ----ARKRECVR 161
>gi|324512080|gb|ADY45013.1| Cleavage and polyadenylation specificity factor subunit 6, partial
[Ascaris suum]
gi|324512083|gb|ADY45014.1| Cleavage and polyadenylation specificity factor subunit 6, partial
[Ascaris suum]
Length = 550
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 81/154 (52%), Gaps = 25/154 (16%)
Query: 29 DDIDLYDDVTLQPFPEHTG-------RSPARYRHHR-----YSHHHSQATS-----SSHC 71
+D DLYD ++P +H +P+ R S H +QA S +S+
Sbjct: 62 NDTDLYD-AAIEPSGQHASSAMSIKSETPSMSRQTSNASVTQSTHPTQAQSLPALGASNQ 120
Query: 72 N-------LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
N Y+GN+TWWTT+ D+ I S G D ID+KF+EN +NGQSKGF G E
Sbjct: 121 NQGGRRYCCYIGNMTWWTTDVDLQTLILSCGASDLIDIKFYENRNNGQSKGFALAVFGVE 180
Query: 125 ESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFE 158
++ VME+LP LHG++ +V T+ L +FE
Sbjct: 181 SAVKTVMEKLPQKTLHGQQLVVLPYTKASLAKFE 214
>gi|395544372|ref|XP_003774085.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 [Sarcophilus harrisii]
Length = 472
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 87/160 (54%), Gaps = 18/160 (11%)
Query: 29 DDIDLYDDV---TLQPFPEHTGRS--PARYRHHRYSHHHSQATS---------SSHCNLY 74
D IDLYDDV + QP + + + P R + +S++ + + +Y
Sbjct: 36 DQIDLYDDVLAASSQPSDDRSSSAEPPPPIRQEQSPKPNSKSPAILYTYSGLRNKRAAVY 95
Query: 75 VGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
VG+ +WWTT+ + IRS+GV D +++KF EN +NGQSKG+ V + SE S+ ++E L
Sbjct: 96 VGSFSWWTTDQQLIQIIRSVGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELL 155
Query: 135 PTLELHGRKPMVAYPTRNVLYQFEAQN----PLRSRSRRS 170
P L+G K V TR L QFEAQ P R+ SR S
Sbjct: 156 PGKILNGEKVDVRLATRQNLSQFEAQARKRVPPRAHSRDS 195
>gi|148709412|gb|EDL41358.1| mCG145657 [Mus musculus]
Length = 407
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 87/161 (54%), Gaps = 18/161 (11%)
Query: 1 MDLYDDAILGMG-PTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYS 59
+DLYDD + P+D +S STE V +P P+ ++PA + YS
Sbjct: 67 IDLYDDVLTAASQPSDDRSS-----STEPPP-----PVRQEPAPKPNNKTPAIL--YTYS 114
Query: 60 HHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTV 119
S+ +YVG+ +WWTT+ + IRSIGV D +++KF EN +NGQSKG+ V
Sbjct: 115 GLRSR-----RAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEV 169
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQ 160
+ SE S+ ++E LP L+G K V TR L QFEAQ
Sbjct: 170 VVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ 210
>gi|26353634|dbj|BAC40447.1| unnamed protein product [Mus musculus]
Length = 471
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 91/173 (52%), Gaps = 22/173 (12%)
Query: 1 MDLYDDAILGMG-PTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYS 59
+DLYDD + P+D +S STE V +P P+ ++PA + YS
Sbjct: 28 IDLYDDVLTAASQPSDDRSS-----STEPPP-----PVRQEPAPKPNNKTPAIL--YTYS 75
Query: 60 HHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTV 119
S+ +YVG+ +WWTT+ + IRSIGV D +++KF EN +NGQSKG+ V
Sbjct: 76 GLRSR-----RAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEV 130
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRSYR 172
+ SE S+ ++E LP L+G K V TR L QFEAQ +R R R
Sbjct: 131 VVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----ARKRECVR 179
>gi|149062394|gb|EDM12817.1| similar to RIKEN cDNA 5730453I16 [Rattus norvegicus]
Length = 363
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 91/173 (52%), Gaps = 22/173 (12%)
Query: 1 MDLYDDAILGMG-PTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYS 59
+DLYDD + P+D +S STE V +P P+ ++PA + YS
Sbjct: 28 IDLYDDVLTAASQPSDDRSS-----STEPPP-----PVRQEPAPKPNNKTPAIL--YTYS 75
Query: 60 HHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTV 119
S+ +YVG+ +WWTT+ + IRSIGV D +++KF EN +NGQSKG+ V
Sbjct: 76 GLRSR-----RAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEV 130
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRSYR 172
+ SE S+ ++E LP L+G K V TR L QFEAQ +R R R
Sbjct: 131 VVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----ARKRECVR 179
>gi|256665243|ref|NP_758506.3| cleavage and polyadenylation specificity factor subunit 7 isoform 1
[Mus musculus]
gi|88909267|sp|Q8BTV2.2|CPSF7_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 7
gi|74222505|dbj|BAE38138.1| unnamed protein product [Mus musculus]
Length = 471
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 91/173 (52%), Gaps = 22/173 (12%)
Query: 1 MDLYDDAILGMG-PTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYS 59
+DLYDD + P+D +S STE V +P P+ ++PA + YS
Sbjct: 28 IDLYDDVLTAASQPSDDRSS-----STEPPP-----PVRQEPAPKPNNKTPAIL--YTYS 75
Query: 60 HHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTV 119
S+ +YVG+ +WWTT+ + IRSIGV D +++KF EN +NGQSKG+ V
Sbjct: 76 GLRSR-----RAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEV 130
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRSYR 172
+ SE S+ ++E LP L+G K V TR L QFEAQ +R R R
Sbjct: 131 VVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----ARKRECVR 179
>gi|118403900|ref|NP_001072264.1| cleavage and polyadenylation specific factor 7, 59kDa [Xenopus
(Silurana) tropicalis]
gi|111305517|gb|AAI21254.1| hypothetical protein MGC145258 [Xenopus (Silurana) tropicalis]
Length = 320
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 25/164 (15%)
Query: 29 DDIDLYDDV------------------TLQPFPEHTGRSPARYRHHRYSHHHSQATSSSH 70
+ +DLYDDV L+P SP +HS +
Sbjct: 25 EQVDLYDDVLAVPAISSSHVESNRNSSALEPTSPVQSTSPMSNNKTPEVLYHS---GRNR 81
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
++Y+GN +WWTT+ + IRS+G+ D +++KF EN +NGQSKGF V L SE SM+L+
Sbjct: 82 VSMYIGNFSWWTTDQQLLALIRSVGIKDHVEIKFAENRANGQSKGFAEVILSSESSMNLI 141
Query: 131 MERLPTLELHGRKPMVAYPTRNVLYQFEA----QNPLRSRSRRS 170
+E LP +L+G+K V R L FEA + P R+ S+ S
Sbjct: 142 LEHLPQKKLNGKKLDVRPANRQNLSFFEALSRKKIPPRANSKSS 185
>gi|354502497|ref|XP_003513322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 1 [Cricetulus griseus]
Length = 471
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 83/158 (52%), Gaps = 18/158 (11%)
Query: 29 DDIDLYDDV---TLQPFPEHTGRS----PARYRHHRYSHHHSQAT-------SSSHCNLY 74
D IDLYDDV T QP + + + P R ++ + A S +Y
Sbjct: 26 DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQEPSPKPNNKTPAILYTYSGLRSRRAAVY 85
Query: 75 VGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
VG+ +WWTT+ + IRSIGV D +++KF EN +NGQSKG+ V + SE S+ ++E L
Sbjct: 86 VGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELL 145
Query: 135 PTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRSYR 172
P L+G K V TR L QFEAQ +R R R
Sbjct: 146 PGKVLNGEKVDVRPATRQNLSQFEAQ----ARKRECVR 179
>gi|189441997|gb|AAI67355.1| MGC145258 protein [Xenopus (Silurana) tropicalis]
Length = 195
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 77/149 (51%), Gaps = 21/149 (14%)
Query: 29 DDIDLYDDV------------------TLQPFPEHTGRSPARYRHHRYSHHHSQATSSSH 70
+ +DLYDDV L+P SP +HS +
Sbjct: 25 EQVDLYDDVLAVPAISSSHVESNRNSSALEPTSPVQSTSPMSNNKTPEVLYHS---GRNR 81
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
++Y+GN +WWTT+ + IRS+G+ D +++KF EN +NGQSKGF V L SE SM+L+
Sbjct: 82 VSMYIGNFSWWTTDQQLLALIRSVGIKDHVEIKFAENRANGQSKGFAEVILSSESSMNLI 141
Query: 131 MERLPTLELHGRKPMVAYPTRNVLYQFEA 159
+E LP +L+G+K V R L FEA
Sbjct: 142 LEHLPQKKLNGKKLDVRPANRQNLSFFEA 170
>gi|363733969|ref|XP_423693.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
7-like isoform 2 [Gallus gallus]
Length = 471
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 87/160 (54%), Gaps = 16/160 (10%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSH 60
MDLYDD + T ++ P S+ ++ ++ +P P+ ++PA + YS
Sbjct: 28 MDLYDDVL-----TASSQPPESRTSS----LEPPPEIRQEPPPKPNSKAPAIL--YTYS- 75
Query: 61 HHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVT 120
+ +YVG+ +WWTT+ + IRS+GV D +++KF EN +NGQSKG+ V
Sbjct: 76 ----GLRNKRAAVYVGSFSWWTTDQQLIQTIRSVGVYDVVELKFAENRANGQSKGYAEVV 131
Query: 121 LGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQ 160
+ SE S+ ++E LP L+G K V TR L QFEAQ
Sbjct: 132 VASENSVHKLLELLPGKVLNGDKVEVRLATRQNLSQFEAQ 171
>gi|432089483|gb|ELK23424.1| Cleavage and polyadenylation specificity factor subunit 7 [Myotis
davidii]
Length = 500
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 84/158 (53%), Gaps = 18/158 (11%)
Query: 29 DDIDLYDDV---TLQPFPEHTGRS----PARYRHHRYSHHHSQATSSSHCNL-------Y 74
D IDLYDDV T QP + + + P R ++ + A ++ L Y
Sbjct: 55 DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQEPSPKPNNKTPAILYTYSGLRTRRAAVY 114
Query: 75 VGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
VG+ +WWTT+ + IRSIGV D +++KF EN +NGQSKG+ + + SE S+ ++E L
Sbjct: 115 VGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEIVVASENSVHKLLELL 174
Query: 135 PTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRSYR 172
P L+G K V TR L QFEAQ +R R R
Sbjct: 175 PGKVLNGEKVDVRPATRQNLSQFEAQ----ARKRECVR 208
>gi|291190686|ref|NP_001167169.1| Cleavage and polyadenylation specificity factor subunit 7 [Salmo
salar]
gi|223648440|gb|ACN10978.1| Cleavage and polyadenylation specificity factor subunit 7 [Salmo
salar]
Length = 467
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 4/102 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGN +WWT++ D+ + R++GV D +++KF EN +NGQS+G+ V + +EES+ ++E
Sbjct: 91 VYVGNFSWWTSDKDLINVARTLGVKDIVEIKFAENRANGQSRGYAEVVVATEESLQRLLE 150
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQN----PLRSRSRRS 170
LP ++G K + TR L FEAQ P RS S+ S
Sbjct: 151 TLPNCHVNGEKVDCRFATRQNLAVFEAQANKRVPQRSNSKES 192
>gi|449501834|ref|XP_004174466.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 7 [Taeniopygia guttata]
Length = 457
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 93/188 (49%), Gaps = 28/188 (14%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS--PARYRH 55
+D+Y D P +N D +DLYDDV + QP + + S P R
Sbjct: 8 IDIYADEEFTQDPEFSNA----------DQMDLYDDVLAASSQPQEKRSSSSEAPPEIRQ 57
Query: 56 HRYSHHHSQATS---------SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
+S+ + + +Y+G+ +WWTT+ + IRS+GV D +++KF E
Sbjct: 58 EPSPKPNSKPPAILYTYSGLRNKRAAVYIGSFSWWTTDQQLIQTIRSVGVYDVVELKFAE 117
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----P 162
N +NGQSKG+ V + SE S+ ++E LP L+G K V TR L QFEAQ P
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKILNGDKVEVRLATRQNLSQFEAQARKRVP 177
Query: 163 LRSRSRRS 170
R+ SR S
Sbjct: 178 PRAHSRDS 185
>gi|312077511|ref|XP_003141336.1| hypothetical protein LOAG_05751 [Loa loa]
Length = 536
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 79/157 (50%), Gaps = 19/157 (12%)
Query: 2 DLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHH 61
DLYD AI G+ V TE + + VT P + PA +
Sbjct: 68 DLYDAAI---------EPSGQIVKTES--LLVKSSVTATPQESQSKALPALGVNQNN--- 113
Query: 62 HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
T +C Y+GN+TWWTT+ D+ I S G + ID+KF+EN +NGQSKGF
Sbjct: 114 ----TGRRYC-CYIGNMTWWTTDVDLQTMILSCGATNLIDIKFYENRNNGQSKGFALAVF 168
Query: 122 GSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFE 158
+E S+ VME+LP LHG++ +V T+ L +FE
Sbjct: 169 TAESSVKTVMEKLPQKTLHGQQLVVLPYTKASLAKFE 205
>gi|268535660|ref|XP_002632965.1| Hypothetical protein CBG21723 [Caenorhabditis briggsae]
Length = 496
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 12 GPTDTNTSPGEHVSTEHDDIDLYDDVTL----QPFPEHTGRSPARYRHHRYSHHHSQATS 67
GP D N E V E D DLY++ Q P SP + + A
Sbjct: 19 GPIDENELLDEKVLKEEDPDDLYEEAIAPTSHQEEPAKLVDSPVAVTAPVVATKPAAAPE 78
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVP--DFIDVKFFENASNGQSKGFCTVTLGSEE 125
Y+GNL W+TT+AD+ AI S G+ F D+KFFEN +NGQSKG+ + L S+
Sbjct: 79 GRKYCCYIGNLLWYTTDADLLKAIASTGLSRSQFADMKFFENRTNGQSKGYALLVLNSDA 138
Query: 126 SMSLVMERLPTLELHGRKPMV-AYPTRN--VLYQFEAQNPLRSRSRR 169
++ +ME LP+ +HG+ P V AY N L + +A+N R ++
Sbjct: 139 AVKQIMETLPSKPIHGQSPTVLAYNKTNQAKLEEVQAKNQTRPDVKK 185
>gi|393908399|gb|EFO22735.2| hypothetical protein LOAG_05751 [Loa loa]
Length = 546
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 79/157 (50%), Gaps = 19/157 (12%)
Query: 2 DLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHH 61
DLYD AI G+ V TE + + VT P + PA +
Sbjct: 68 DLYDAAI---------EPSGQIVKTES--LLVKSSVTATPQESQSKALPALGVNQNN--- 113
Query: 62 HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
T +C Y+GN+TWWTT+ D+ I S G + ID+KF+EN +NGQSKGF
Sbjct: 114 ----TGRRYC-CYIGNMTWWTTDVDLQTMILSCGATNLIDIKFYENRNNGQSKGFALAVF 168
Query: 122 GSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFE 158
+E S+ VME+LP LHG++ +V T+ L +FE
Sbjct: 169 TAESSVKTVMEKLPQKTLHGQQLVVLPYTKASLAKFE 205
>gi|402585640|gb|EJW79579.1| hypothetical protein WUBG_09506 [Wuchereria bancrofti]
Length = 233
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 19 SPGEHVSTEHDDIDLYDD--------VTLQPFPEH----TGRSPARYRHHRYSHHHSQAT 66
S + V +E +D DLYD V + P T ++ + + T
Sbjct: 54 SEAKVVKSEVNDTDLYDAAIEPSGQVVKAESLPSKSNIITTPQGSQSKALPALGVNQNNT 113
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
+C Y+GN+TWWTT+ D+ I S G + ID+KF+EN +NGQSKGF +E S
Sbjct: 114 GRRYC-CYIGNMTWWTTDVDLQTMILSCGATNLIDIKFYENRNNGQSKGFALAVFTAESS 172
Query: 127 MSLVMERLPTLELHGRKPMVAYPTRNVLYQFE 158
+ VME+LP LHG++ +V T+ L +FE
Sbjct: 173 VKTVMEKLPQKTLHGQQLVVLPYTKASLAKFE 204
>gi|170594021|ref|XP_001901762.1| Conserved hypothetical protein [Brugia malayi]
gi|158590706|gb|EDP29321.1| Conserved hypothetical protein, putative [Brugia malayi]
Length = 545
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
T +C Y+GN+TWWTT+ D+ I S G + ID+KF+EN +NGQSKGF +E
Sbjct: 113 TGRRYC-CYIGNMTWWTTDVDLQTMILSCGATNLIDIKFYENRNNGQSKGFALAVFTAES 171
Query: 126 SMSLVMERLPTLELHGRKPMVAYPTRNVLYQFE 158
S+ VME+LP LHG++ +V T+ L +FE
Sbjct: 172 SVKTVMEKLPQKTLHGQQLVVLPYTKASLAKFE 204
>gi|148222516|ref|NP_001088183.1| cleavage and polyadenylation specific factor 7, 59kDa [Xenopus
laevis]
gi|54035266|gb|AAH84095.1| LOC495008 protein [Xenopus laevis]
Length = 453
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 61/91 (67%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
+ ++Y+GN +WWTT+ + IRS+G+ D +++KF EN +NGQSKGF V + SE SM+
Sbjct: 80 NRVSMYIGNFSWWTTDQQLLALIRSVGIKDHVELKFAENRANGQSKGFAEVIVSSESSMN 139
Query: 129 LVMERLPTLELHGRKPMVAYPTRNVLYQFEA 159
L++E LP +L+G+K V R L FEA
Sbjct: 140 LILEHLPQKKLNGKKLDVRPANRQNLSFFEA 170
>gi|349802915|gb|AEQ16930.1| hypothetical protein [Pipa carvalhoi]
Length = 126
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 60/89 (67%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
++Y+GN +WWTT+ + AIRS+GV D +++KF EN NGQSKG+ V + SE SM+L+
Sbjct: 35 LSMYIGNFSWWTTDQQLLSAIRSVGVRDHVELKFAENRVNGQSKGYAEVIVSSESSMNLI 94
Query: 131 MERLPTLELHGRKPMVAYPTRNVLYQFEA 159
+E+LP +L+G K V R L FEA
Sbjct: 95 LEQLPQKKLNGEKLDVRPVNRQNLSFFEA 123
>gi|301016061|pdb|3N9U|C Chain C, Crystal Structure Of The Complex Between The 25 Kda
Subunit And The 59 Kda Subunit (Rrm Domain) Of Human
Cleavage Factor Im
gi|301016062|pdb|3N9U|I Chain I, Crystal Structure Of The Complex Between The 25 Kda
Subunit And The 59 Kda Subunit (Rrm Domain) Of Human
Cleavage Factor Im
Length = 156
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 77/136 (56%), Gaps = 11/136 (8%)
Query: 37 VTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGV 96
V +P P+ ++PA + YS ++ + +YVG+ +WWTT+ + IRSIGV
Sbjct: 29 VRQEPSPKPNNKTPAIL--YTYSGLRNRRAA-----VYVGSFSWWTTDQQLIQVIRSIGV 81
Query: 97 PDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQ 156
D +++KF EN +NGQSKG+ V + SE S+ ++E LP L+G K V TR L Q
Sbjct: 82 YDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQ 141
Query: 157 FEAQNPLRSRSRRSYR 172
FEAQ +R R R
Sbjct: 142 FEAQ----ARKRECVR 153
>gi|339235037|ref|XP_003379073.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316978345|gb|EFV61346.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 468
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 57/86 (66%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
YVGNLTWWTT D+ +A++SIG+ D ++V+F EN +NGQSKGF +V SE S+ +E
Sbjct: 109 YVGNLTWWTTYFDLQNALQSIGITDLVEVRFNENRANGQSKGFASVGFASEASVRKCLES 168
Query: 134 LPTLELHGRKPMVAYPTRNVLYQFEA 159
L T +HG P+V ++ L+ +
Sbjct: 169 LSTQNIHGMTPIVMPFNKSSLHSLDV 194
>gi|341883368|gb|EGT39303.1| hypothetical protein CAEBREN_25209 [Caenorhabditis brenneri]
Length = 492
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 77/148 (52%), Gaps = 27/148 (18%)
Query: 2 DLYDDAILGMGPTDTN-TSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSH 60
DLYD A+ PT T E V+T + + + + +P GR
Sbjct: 39 DLYDVAL---APTTTEEIKVKEQVTTPNSVVTPTNTLMAKPAASSEGRK----------- 84
Query: 61 HHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVP--DFIDVKFFENASNGQSKGFCT 118
+C YVGNL W+TT+AD+ AI S G+P F D+KFFEN +NGQSKG+
Sbjct: 85 ---------YC-CYVGNLLWYTTDADLMKAIISTGLPRSQFADMKFFENRTNGQSKGYAL 134
Query: 119 VTLGSEESMSLVMERLPTLELHGRKPMV 146
+ L S+ ++ +ME+LPT +HG+ P V
Sbjct: 135 LVLNSDSAVKQIMEQLPTKTIHGQSPTV 162
>gi|341901494|gb|EGT57429.1| hypothetical protein CAEBREN_18741 [Caenorhabditis brenneri]
Length = 492
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVP--DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
YVGNL W+TT+AD+ AI S G+P F D+KFFEN +NGQSKG+ + L S+ ++ +M
Sbjct: 88 YVGNLLWYTTDADLMKAIISTGLPRSQFADMKFFENRTNGQSKGYALLVLNSDSAVKQIM 147
Query: 132 ERLPTLELHGRKPMV 146
E+LPT +HG+ P V
Sbjct: 148 EQLPTKTIHGQSPTV 162
>gi|340374246|ref|XP_003385649.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7-like [Amphimedon queenslandica]
Length = 349
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 59/90 (65%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
++++GNLTWWTT+ D+ A+R G+ + +KF++N +NGQSKGF V L SE
Sbjct: 54 SVFIGNLTWWTTDMDVLSAVREAGLGEVKSLKFYDNRTNGQSKGFTMVELTSEAVALGAP 113
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
++L + +HGRK + AY R + QFEA++
Sbjct: 114 DKLQMITVHGRKLVAAYAGRMSVAQFEAKS 143
>gi|308452783|ref|XP_003089178.1| hypothetical protein CRE_04437 [Caenorhabditis remanei]
gi|308242527|gb|EFO86479.1| hypothetical protein CRE_04437 [Caenorhabditis remanei]
Length = 511
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 83/166 (50%), Gaps = 13/166 (7%)
Query: 12 GPTDTNTSPGEHVSTEHDDIDLYDDVTLQPF----PEHTGRSPAR-YRHHRYSHHHSQAT 66
GP D N D DLYDD + P P + PA S AT
Sbjct: 19 GPIDENALLDAKDFKVEDPDDLYDDA-IAPTSLEEPLKSSSPPATPVTAPTVSLTAKPAT 77
Query: 67 SS---SHCNLYVGNLTWWTTEADMSDAIRSIGVP--DFIDVKFFENASNGQSKGFCTVTL 121
SS +C YVGNL W+TT+AD+ AI + G+ F D+KFFEN +NGQSKG+ + L
Sbjct: 78 SSEGRKYC-CYVGNLLWYTTDADLMKAISTTGLARSQFADMKFFENRTNGQSKGYALLVL 136
Query: 122 GSEESMSLVMERLPTLELHGRKPMV-AYPTRNVLYQFEAQNPLRSR 166
S+ ++ +ME LP+ +HG+ P V AY N E Q ++R
Sbjct: 137 NSDAAVKQIMETLPSKSIHGQSPTVLAYNKTNQAKLEEVQAKSQTR 182
>gi|308468060|ref|XP_003096274.1| hypothetical protein CRE_25790 [Caenorhabditis remanei]
gi|308243317|gb|EFO87269.1| hypothetical protein CRE_25790 [Caenorhabditis remanei]
Length = 497
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 83/166 (50%), Gaps = 13/166 (7%)
Query: 12 GPTDTNTSPGEHVSTEHDDIDLYDDVTLQPF----PEHTGRSPAR-YRHHRYSHHHSQAT 66
GP D N D DLYDD + P P + PA S AT
Sbjct: 19 GPIDENALLDAKDFKVEDPDDLYDDA-IAPTSLEEPLKSSSPPATPVTAPTVSLTAKPAT 77
Query: 67 SS---SHCNLYVGNLTWWTTEADMSDAIRSIGVP--DFIDVKFFENASNGQSKGFCTVTL 121
SS +C YVGNL W+TT+AD+ AI + G+ F D+KFFEN +NGQSKG+ + L
Sbjct: 78 SSEGRKYC-CYVGNLLWYTTDADLMKAISTTGLARSQFADMKFFENRTNGQSKGYALLVL 136
Query: 122 GSEESMSLVMERLPTLELHGRKPMV-AYPTRNVLYQFEAQNPLRSR 166
S+ ++ +ME LP+ +HG+ P V AY N E Q ++R
Sbjct: 137 NSDAAVKQIMETLPSKSIHGQSPTVLAYNKTNQAKLEEVQAKSQTR 182
>gi|410913047|ref|XP_003970000.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7-like [Takifugu rubripes]
Length = 443
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
T+ +LY+GN WWT+++D+ + +GV D D+KF EN NGQS+GF +++ SE
Sbjct: 82 GTAKRKLSLYIGNFPWWTSDSDLVCLAQRLGVKDVTDIKFAENRVNGQSRGFAEMSVTSE 141
Query: 125 ESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN----PLRSRSRRS 170
ES+ +++E++P LHG + T L FE + PLR S+ S
Sbjct: 142 ESLKILLEKVPDCILHGETIDCRFATLQNLSIFEEKASQRVPLRLHSKDS 191
>gi|432851762|ref|XP_004067072.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7-like [Oryzias latipes]
Length = 458
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 57/96 (59%)
Query: 63 SQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLG 122
+Q S +Y+GN WWT++ D+ + +GV D +++F EN NGQS+G+ + +
Sbjct: 80 AQGNSKRRLAIYIGNFPWWTSDKDLMSMAQKLGVKDVTEIRFAENKINGQSRGYAELVVE 139
Query: 123 SEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFE 158
+EES+ ++ER+P +++G + + TR L FE
Sbjct: 140 TEESLKKMLERIPKCKINGERIDCRFATRQNLVMFE 175
>gi|392899873|ref|NP_001255355.1| Protein CFIM-2, isoform a [Caenorhabditis elegans]
gi|26985809|emb|CAA92294.2| Protein CFIM-2, isoform a [Caenorhabditis elegans]
Length = 489
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Query: 65 ATSS---SHCNLYVGNLTWWTTEADMSDAIRSIGVP--DFIDVKFFENASNGQSKGFCTV 119
ATSS +C YVGNL W+TT+AD+ A++S G+ F D+KFFEN +NGQSKG+ +
Sbjct: 76 ATSSEGRKYC-CYVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALL 134
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMV 146
L S+ ++ ME LPT +HG+ P V
Sbjct: 135 VLNSDAAVKQTMEILPTKTIHGQSPTV 161
>gi|392899871|ref|NP_001255354.1| Protein CFIM-2, isoform c [Caenorhabditis elegans]
gi|242340209|emb|CAZ65481.1| Protein CFIM-2, isoform c [Caenorhabditis elegans]
Length = 491
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Query: 65 ATSS---SHCNLYVGNLTWWTTEADMSDAIRSIGVP--DFIDVKFFENASNGQSKGFCTV 119
ATSS +C YVGNL W+TT+AD+ A++S G+ F D+KFFEN +NGQSKG+ +
Sbjct: 76 ATSSEGRKYC-CYVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALL 134
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMV 146
L S+ ++ ME LPT +HG+ P V
Sbjct: 135 VLNSDAAVKQTMEILPTKTIHGQSPTV 161
>gi|392899869|ref|NP_001255353.1| Protein CFIM-2, isoform b [Caenorhabditis elegans]
gi|225878059|emb|CAX65053.1| Protein CFIM-2, isoform b [Caenorhabditis elegans]
Length = 491
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Query: 65 ATSS---SHCNLYVGNLTWWTTEADMSDAIRSIGVP--DFIDVKFFENASNGQSKGFCTV 119
ATSS +C YVGNL W+TT+AD+ A++S G+ F D+KFFEN +NGQSKG+ +
Sbjct: 78 ATSSEGRKYC-CYVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALL 136
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMV 146
L S+ ++ ME LPT +HG+ P V
Sbjct: 137 VLNSDAAVKQTMEILPTKTIHGQSPTV 163
>gi|402577735|gb|EJW71691.1| hypothetical protein WUBG_17401, partial [Wuchereria bancrofti]
Length = 225
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 78 LTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTL 137
+TWWTT+ D+ I S G + ID+KF+EN +NGQSKGF +E S+ VME+LP
Sbjct: 1 MTWWTTDVDLQTMILSCGATNLIDIKFYENRNNGQSKGFALAVFTAESSVKTVMEKLPQK 60
Query: 138 ELHGRKPMVAYPTRNVLYQFE 158
LHG++ +V T+ L +FE
Sbjct: 61 TLHGQQLVVLPYTKASLAKFE 81
>gi|355680863|gb|AER96664.1| cleavage and polyadenylation specific factor 6, 68kDa [Mustela
putorius furo]
Length = 88
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 46/60 (76%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
+ LY+GNLTWWTT+ D+++A+ S+GV D +++KFFEN +NGQSKGF V +GSE S
Sbjct: 29 TGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEAS 88
>gi|320165151|gb|EFW42050.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 535
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A S ++Y+G +TWWTT+ D+ DA+ ++G+ D + +F+E S+G+S+G + SE
Sbjct: 168 AGSGKKGSIYIGGMTWWTTDKDIIDALAALGIVDVMSTRFYEERSSGKSRGVAYIEFASE 227
Query: 125 ESMSLVMERLPTLELHGR 142
ES +ERLP+ +HG+
Sbjct: 228 ESARSAIERLPSHPVHGK 245
>gi|348509801|ref|XP_003442435.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7-like [Oreochromis niloticus]
Length = 454
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
++YVG+ WW T+ D+ + +GV + D+KF E+ SNG S+GF V + S+ES+ L++
Sbjct: 90 SVYVGHFPWWVTDKDLISMAKGLGVKNITDIKFAEDRSNGVSRGFAEVVITSDESLKLML 149
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEAQN----PLRS 165
E+ P +++G + Y T L FE + PLR+
Sbjct: 150 EKAPQCKINGERIDCRYATCQNLAFFEEEANKRVPLRA 187
>gi|301618291|ref|XP_002938557.1| PREDICTED: hypothetical protein LOC100493613 [Xenopus (Silurana)
tropicalis]
Length = 502
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
LY+GNLTWWTT+ D++DA+ S+GV D +++KFFEN +NGQSKG T + S
Sbjct: 83 LYIGNLTWWTTDEDLTDAVHSLGVNDILEIKFFENRANGQSKGHSPTTQAGQMS 136
>gi|351697895|gb|EHB00814.1| Cleavage and polyadenylation specificity factor subunit 7
[Heterocephalus glaber]
Length = 345
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 18/117 (15%)
Query: 1 MDLYDDAILGMG-PTDTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYS 59
+DLYDD + P+D +S E + +P P+ ++PA + YS
Sbjct: 28 IDLYDDVLTATSQPSDDRSSSAEPSPP----------ILQEPSPKPNNKTPAIL--YMYS 75
Query: 60 HHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGF 116
S +YVG+ WWTT+ + IRSIGV D +++KF EN +NGQSKGF
Sbjct: 76 -----GLRSRRAAVYVGSFFWWTTDQQLIQVIRSIGVYDVVELKFAENQANGQSKGF 127
>gi|440803034|gb|ELR23948.1| RNA recognition domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 440
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNLTWWTT+ D+ D G VKFFEN NG+SKG+ V E+ E
Sbjct: 60 LYIGNLTWWTTDQDLEDVCSQFG--KVKQVKFFENKQNGRSKGYALVEYYDAEASRQAKE 117
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQF 157
+L +H ++ MV + + L +
Sbjct: 118 KLQGYTIHDKQVMVNFVSPQTLAEL 142
>gi|393235142|gb|EJD42699.1| hypothetical protein AURDEDRAFT_114941 [Auricularia delicata
TFB-10046 SS5]
Length = 367
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LY+G+L WWTT+AD+ A +GV +F DV F E+ NG+SKG V GS ++ + +
Sbjct: 105 LYIGDLQWWTTDADLRKAAGQLGVNIEFRDVTFSEHKVNGKSKGIAYVECGSADNAATLK 164
Query: 132 ERLPTLELHGRKPMVAYPT 150
T E GRK + A PT
Sbjct: 165 AWFDTNEFQGRK-VTATPT 182
>gi|242080119|ref|XP_002444828.1| hypothetical protein SORBIDRAFT_07g028810 [Sorghum bicolor]
gi|241941178|gb|EES14323.1| hypothetical protein SORBIDRAFT_07g028810 [Sorghum bicolor]
Length = 592
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG+L WWTT+AD+ + G +V+FF+ ++G+SKG+C V + + E
Sbjct: 189 LFVGDLHWWTTDADLEAELSKYGP--VKEVRFFDEKASGKSKGYCQVDFYDPAAAAACKE 246
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQF-EAQ 160
+ HGR +VA+ + N + + EAQ
Sbjct: 247 GMNGYSFHGRPCVVAFASPNTVRRMGEAQ 275
>gi|357148236|ref|XP_003574683.1| PREDICTED: uncharacterized protein LOC100827188 [Brachypodium
distachyon]
Length = 586
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG+L WWTT+AD+ + G+ +V+FF+ ++G+SKG+C V ++S E
Sbjct: 188 LFVGDLHWWTTDADLEAELSKYGL--VKEVRFFDEKASGKSKGYCQVDFFDHVAVSACKE 245
Query: 133 RLPTLELHGRKPMVAYPT-RNVLYQFEAQ 160
+ HGR +VAY + NV E+Q
Sbjct: 246 GMNGHLFHGRPCVVAYASPSNVRRMGESQ 274
>gi|281206591|gb|EFA80777.1| hypothetical protein PPL_06363 [Polysphondylium pallidum PN500]
Length = 710
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+V NL WWTTE ++ G ++K FEN +NG+SKG+ V L S + E
Sbjct: 173 LFVANLEWWTTEQNLEQLFSEFGK--LKNLKIFENETNGKSKGYAFVELQSHDIARQAKE 230
Query: 133 RLPTLELHGR----KPMVAYPTRNVLYQFE 158
+L EL+G+ K M + + VL F+
Sbjct: 231 KLNNKELNGKTIIIKSMNQHTYQQVLLAFK 260
>gi|168038070|ref|XP_001771525.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677252|gb|EDQ63725.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 82
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L WWTT+A++ A+ G ++KFFE ++G+SKG+C V ++ + E
Sbjct: 4 LFVGELQWWTTDAELEAALSEYGRIK--NLKFFEEKASGKSKGYCQVEFFDSQAARVCKE 61
Query: 133 RLPTLELHGRKPMVAYPT 150
++ +GR +VA+ +
Sbjct: 62 KMDGRVFNGRACVVAFAS 79
>gi|255547966|ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein, putative [Ricinus communis]
Length = 644
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVG L WWTT+A++ + + G+ ++KFF+ ++G+SKG+C V + + E
Sbjct: 222 LYVGELHWWTTDAELENVLSQYGM--VKEIKFFDERASGKSKGYCQVEFYDAAAAAACKE 279
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEA 159
+ +GR +VA+ ++ L Q A
Sbjct: 280 GMNGHLFNGRACVVAFASQQTLKQMGA 306
>gi|384245484|gb|EIE18978.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 339
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 46 TGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFF 105
G P R S + + + +YVGNL WWTT+A + + G +FF
Sbjct: 105 AGEGPVVKRGSAASSSRGEPSYGTIDAVYVGNLQWWTTDAQIEELCSQFG--SVQKFRFF 162
Query: 106 ENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
E+ +NG+SKG+ VT S ++ E L + G+K +V +
Sbjct: 163 EDKANGKSKGYVLVTFDSPKAAYTCKEGLDGTMVDGKKCVVTF 205
>gi|326431188|gb|EGD76758.1| hypothetical protein PTSG_08110 [Salpingoeca sp. ATCC 50818]
Length = 508
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
++YVGNL WWTT+ D+ DA R V D ++ +E+ NG+SKGF V+ + S V+
Sbjct: 99 SVYVGNLCWWTTDKDIYDACRRCNVNDVESIEVYEDRRNGRSKGFAIVSCKNSASCH-VL 157
Query: 132 ER 133
ER
Sbjct: 158 ER 159
>gi|240282206|gb|EER45709.1| RRM domain-containing protein [Ajellomyces capsulatus H143]
gi|325088343|gb|EGC41653.1| RRM domain-containing protein [Ajellomyces capsulatus H88]
Length = 417
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 57 RYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKG 115
+ SH + A S+ L+V +L WWTT+ D+ + GV D + DV F E+ NG+SKG
Sbjct: 106 KESHDNQAADPSATTALFVSDLYWWTTDDDIRGWVNQAGVEDELKDVTFSEHKVNGKSKG 165
Query: 116 FCTVTLGSEESMSLVMERLPTLELH--GRKPMVAY--PTRNVLYQFEAQNPLRSRSRRSY 171
V S ++ + ++ + RK V Y P N NP+R + R
Sbjct: 166 QAFVEFRSSQAATATKHKIESFNTQQSSRKYTVTYTHPNTNPFRTLPKDNPMRGKDDRQA 225
Query: 172 R 172
R
Sbjct: 226 R 226
>gi|154273939|ref|XP_001537821.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415429|gb|EDN10782.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 417
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 57 RYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKG 115
+ SH + A S+ L+V +L WWTT+ D+ + GV D + DV F E+ NG+SKG
Sbjct: 106 KESHDNQAADPSATTALFVSDLYWWTTDDDIRGWVNQAGVEDELKDVTFSEHKVNGKSKG 165
Query: 116 FCTVTLGSEESMSLVMERLPTLELH--GRKPMVAY--PTRNVLYQFEAQNPLRSRSRRSY 171
V S ++ + ++ + RK V Y P N NP+R + R
Sbjct: 166 QAFVEFRSSQAATATKHKIESFNTQQSSRKYTVTYTHPNTNPFRTLPKDNPMRGKDDRQA 225
Query: 172 R 172
R
Sbjct: 226 R 226
>gi|413925203|gb|AFW65135.1| hypothetical protein ZEAMMB73_625740 [Zea mays]
gi|413925204|gb|AFW65136.1| hypothetical protein ZEAMMB73_625740 [Zea mays]
Length = 603
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L WWTT+AD+ + G +V+FF+ ++G+SKG+C V + + E
Sbjct: 181 LFVGELHWWTTDADLESELSKYGP--VKEVRFFDEKASGKSKGYCQVDFYDPGAAAACKE 238
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQF-EAQ 160
+ +GR +VA+ T N + + EAQ
Sbjct: 239 GMNGHTFNGRPCVVAFATPNSVRRMGEAQ 267
>gi|225559272|gb|EEH07555.1| RRM domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 417
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 57 RYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKG 115
+ SH + A S+ L+V +L WWTT+ D+ + GV D + DV F E+ NG+SKG
Sbjct: 106 KESHDNQAADPSATTALFVSDLYWWTTDDDIRGWVNQAGVEDELKDVTFSEHKVNGKSKG 165
Query: 116 FCTVTLGSEESMSLVMERLPTLELH--GRKPMVAY--PTRNVLYQFEAQNPLRSRSRRSY 171
V S ++ + ++ + RK V Y P N NP+R + R
Sbjct: 166 QAFVEFRSSQAATATKHKIESFNTQQSSRKYTVTYTHPNTNPFRTLPKDNPMRGKDDRQA 225
Query: 172 R 172
R
Sbjct: 226 R 226
>gi|414869231|tpg|DAA47788.1| TPA: hypothetical protein ZEAMMB73_344252 [Zea mays]
Length = 592
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG+L WWTT+AD+ + G +V+FF+ ++G+SKG+C V + + E
Sbjct: 197 LFVGDLHWWTTDADLEAELSKYGT--VKEVRFFDEKASGKSKGYCQVDFYDPGAAASCKE 254
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQF-EAQ 160
+ +GR +VA+ + N + + EAQ
Sbjct: 255 GMNGHSFNGRPCVVAFASPNTVRRMGEAQ 283
>gi|328766214|gb|EGF76270.1| hypothetical protein BATDEDRAFT_92860 [Batrachochytrium
dendrobatidis JAM81]
Length = 666
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Query: 61 HHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVK---FFENASNGQSKGFC 117
HHS++ + V +L+WWT++ ++ D +R+ GV D + V+ F E +NG+SKG C
Sbjct: 144 HHSRS-------IVVQDLSWWTSDQNIFDILRAAGVYDQLVVREFGFSEIKANGKSKGIC 196
Query: 118 TVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
+ + + + E +++HG+ P V Y
Sbjct: 197 YIQFDTSTAATKAKEFFERIDIHGKPPSVKY 227
>gi|168015686|ref|XP_001760381.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688395|gb|EDQ74772.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L WWTT+A++ A+ G ++KFFE ++G+SKG+C V ++ L E
Sbjct: 2 LFVGELQWWTTDAELEAALSEYGRIK--NLKFFEEKASGKSKGYCQVEFFDSQAARLCKE 59
Query: 133 RLPTLELHGRKPMV 146
++ +GR +V
Sbjct: 60 KMDGRVFNGRACVV 73
>gi|414869233|tpg|DAA47790.1| TPA: hypothetical protein ZEAMMB73_970575 [Zea mays]
Length = 596
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L WWTT+AD+ + G +V+FF+ ++G+SKG+C V + + E
Sbjct: 178 LFVGELHWWTTDADLESELIKYG--SVKEVRFFDEKASGKSKGYCQVDFYDPGAAAACKE 235
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQF-EAQ 160
+ +GR +VA+ T N + + EAQ
Sbjct: 236 AMNGHTFNGRPCVVAFATPNSVRRMGEAQ 264
>gi|326499740|dbj|BAJ86181.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523525|dbj|BAJ92933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 602
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG+L WWTT+AD+ + G +V+FF+ ++G+SKG+C V + + E
Sbjct: 179 LFVGDLHWWTTDADLEAELVKYG--HVKEVRFFDEKASGKSKGYCQVDFFDPGAAAACKE 236
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQF-EAQ 160
+ +GR +VA+ + N + + EAQ
Sbjct: 237 GMNGHPFNGRPCVVAFASPNTVRRMGEAQ 265
>gi|359473131|ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
vinifera]
gi|359473133|ref|XP_003631251.1| PREDICTED: uncharacterized protein LOC100268141 isoform 2 [Vitis
vinifera]
Length = 647
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A + L+VG L WWTT+A++ + G ++KFF+ ++G+SKG+C V
Sbjct: 223 AVDNGATMLFVGELHWWTTDAELESVLSQYGR--VKEIKFFDERASGKSKGYCQVEFYDA 280
Query: 125 ESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEA 159
+ + E + +GR +VA+ + L Q A
Sbjct: 281 SAAAACKEGMNGYIFNGRACVVAFASPQTLKQMGA 315
>gi|315047080|ref|XP_003172915.1| RRM domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311343301|gb|EFR02504.1| RRM domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 418
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGV-PDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV- 130
LY+ +L WWTT+ ++ I GV D DV F E+ NG+SKG V S ++ ++
Sbjct: 121 LYISDLHWWTTDDEVRGWINQAGVEADLKDVTFSEHKVNGKSKGQAFVEFTSAQAATIAK 180
Query: 131 --MERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRS 165
+E + + GRK VAY P N +NP+R
Sbjct: 181 HKIEEMNNAQQGGRKYAVAYTQPNVNPFKTLPKENPMRG 219
>gi|357158938|ref|XP_003578288.1| PREDICTED: uncharacterized protein LOC100838039 isoform 1
[Brachypodium distachyon]
gi|357158941|ref|XP_003578289.1| PREDICTED: uncharacterized protein LOC100838039 isoform 2
[Brachypodium distachyon]
gi|357158944|ref|XP_003578290.1| PREDICTED: uncharacterized protein LOC100838039 isoform 3
[Brachypodium distachyon]
Length = 600
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG+L WWTT+AD+ + G +V+FF+ ++G+SKG+C V + + E
Sbjct: 187 LFVGDLHWWTTDADLEAELVKYG--HVKEVRFFDEKASGKSKGYCQVDFFDPGAAAACKE 244
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQF-EAQ 160
+ +GR +VA+ + N + + EAQ
Sbjct: 245 GMNGHLFNGRPCVVAFASPNTVRRMGEAQ 273
>gi|393221429|gb|EJD06914.1| hypothetical protein FOMMEDRAFT_131707 [Fomitiporia mediterranea
MF3/22]
Length = 368
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 49 SPARYRHHRYSHHHSQATSSSHCN---LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKF 104
+PA H + + S+ N LY+G+L WWTT+ D+ A +IGV + D+ F
Sbjct: 80 NPANLGHGAMNGNLGAGLSNMPSNMDALYIGDLQWWTTDEDLRKATLNIGVNIELKDITF 139
Query: 105 FENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRK 143
E+ NG+SKG V S E+ +L+ + GR+
Sbjct: 140 SEHKVNGKSKGIAYVECHSPENANLIKNWFDKNDFQGRR 178
>gi|302767344|ref|XP_002967092.1| hypothetical protein SELMODRAFT_7063 [Selaginella moellendorffii]
gi|300165083|gb|EFJ31691.1| hypothetical protein SELMODRAFT_7063 [Selaginella moellendorffii]
Length = 105
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+ + L WWTT+A++ A+ G +KFFE ++G+SKG C V L E
Sbjct: 1 IVISELQWWTTDAELEGALAEFG--KIKGIKFFEERASGKSKGLCQVDFFEPLPAQLCKE 58
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQ 156
L +GR +VAY T +L Q
Sbjct: 59 NLHGRVFNGRPCVVAYATPQILKQ 82
>gi|224110826|ref|XP_002315647.1| predicted protein [Populus trichocarpa]
gi|222864687|gb|EEF01818.1| predicted protein [Populus trichocarpa]
Length = 573
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVG L WWTT+A++ G ++KFF+ ++G+SKG+C V + + E
Sbjct: 174 LYVGELHWWTTDAELESVASQYGR--VKEIKFFDERASGKSKGYCQVDFYEAAAAAACKE 231
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEA 159
+ +GR +VA+ + L Q A
Sbjct: 232 GMNEHVFNGRPCVVAFASAQTLKQMGA 258
>gi|255563498|ref|XP_002522751.1| RNA-binding protein, putative [Ricinus communis]
gi|223537989|gb|EEF39602.1| RNA-binding protein, putative [Ricinus communis]
Length = 702
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L WWTT+A++ + GV +VKFF+ ++G+SKG+C V + + E
Sbjct: 224 LFVGELHWWTTDAELEAELCKYGV--VKEVKFFDEKASGKSKGYCQVEFFDPAAAAACKE 281
Query: 133 RLPTLELHGRKPMVAYPT 150
+ +GR +VA+ T
Sbjct: 282 GMNGHLFNGRPCVVAFAT 299
>gi|390594646|gb|EIN04056.1| hypothetical protein PUNSTDRAFT_116765 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 336
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEES 126
S + LY+G+L WWTT+ D+ ++GV D D+ F E+ NG+SKG + GS E+
Sbjct: 111 SGYDALYIGDLQWWTTDEDLRQVALNVGVTIDHKDITFSEHKVNGKSKGIAYIECGSPEN 170
Query: 127 MSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRS 165
+ + E + R+ A PT + NP R+
Sbjct: 171 AAALKEWFDNNDFQNRR-ATATPTNSA-----QGNPFRT 203
>gi|295667359|ref|XP_002794229.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286335|gb|EEH41901.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 416
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 49 SPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFEN 107
SP + + SH + L+V +L WWTT+ D+ + GV D DV F E+
Sbjct: 98 SPQQGVKRKESHDDRSMDPDATTALFVSDLYWWTTDDDIRGWVNQAGVENDLKDVTFSEH 157
Query: 108 ASNGQSKGFCTVTLGSEESMSLVMERLPTLELH--GRKPMVAY--PTRNVLYQFEAQNPL 163
NG+SKG V S ++ + ++ + GRK V Y P+ N NP+
Sbjct: 158 KVNGKSKGQAFVEFRSPQAATATKHKIESFNTQQSGRKYTVTYTHPSTNPFRTLPKDNPM 217
Query: 164 RSR 166
R++
Sbjct: 218 RAK 220
>gi|15222208|ref|NP_172778.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|4850402|gb|AAD31072.1|AC007357_21 Contains similarity to gb|Y12424 SGRP-1 protein frm Solanum
commersonii and contains a PF|00076 RNA rocognition
motif [Arabidopsis thaliana]
gi|17064902|gb|AAL32605.1| Unknown protein [Arabidopsis thaliana]
gi|27311939|gb|AAO00935.1| Unknown protein [Arabidopsis thaliana]
gi|332190860|gb|AEE28981.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 573
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L WWTT+A++ + G ++KFF+ +G+SKG+C V + + E
Sbjct: 204 LFVGELHWWTTDAEIESVLSQYGR--VKEIKFFDERVSGKSKGYCQVEFYDSAAAAACKE 261
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQF--------EAQNPLRSR 166
+ +G+ +VA+ + L Q + QN +++R
Sbjct: 262 GMNGFIFNGKACVVAFASPETLKQMGANFTGRNQGQNQIQNR 303
>gi|444335495|ref|YP_007391864.1| RNP-1 RNA-binding protein [Blattabacterium sp. (Blatta orientalis)
str. Tarazona]
gi|444299874|gb|AGD98111.1| RNP-1 RNA-binding protein [Blattabacterium sp. (Blatta orientalis)
str. Tarazona]
Length = 90
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+ LYVGNL++ TE ++ + SIG + F E+ SN +SKGF + + +EE+
Sbjct: 3 NTKLYVGNLSYEMTEQELKNYFESIGEVTHAKIIFDESTSNKRSKGFGFIEMSNEENAKQ 62
Query: 130 VMERLPTLELHGRKPMVA 147
+E+L E GR +V+
Sbjct: 63 AIEKLNGTEFMGRNIIVS 80
>gi|302754990|ref|XP_002960919.1| hypothetical protein SELMODRAFT_7061 [Selaginella moellendorffii]
gi|300171858|gb|EFJ38458.1| hypothetical protein SELMODRAFT_7061 [Selaginella moellendorffii]
Length = 105
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+ + L WWTT+A++ A+ G +KFFE ++G+SKG C V L E
Sbjct: 1 IVISELQWWTTDAELEGALAEFG--KIKGIKFFEERASGKSKGLCQVDFFEPLPAQLCKE 58
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQ 156
L +GR +VAY T +L Q
Sbjct: 59 NLHGRVFNGRPCVVAYATPQMLKQ 82
>gi|225680012|gb|EEH18296.1| RRM domain-containing protein [Paracoccidioides brasiliensis Pb03]
Length = 418
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 50 PARYRHH--------------RYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIG 95
PA+ +HH + SH + L+V +L WWTT+ D+ + G
Sbjct: 84 PAKQQHHQPQVQAPPQQGVKRKESHDDRSMDPDATTALFVSDLYWWTTDDDIRGWVNQAG 143
Query: 96 VP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELH--GRKPMVAY--PT 150
V D DV F E+ NG+SKG V S ++ + ++ + GRK V Y P+
Sbjct: 144 VENDLKDVTFSEHKVNGKSKGQAFVEFRSPQAATATKHKIESFNTQQSGRKYTVTYTHPS 203
Query: 151 RNVLYQFEAQNPLRSR 166
N NP+R++
Sbjct: 204 TNPFRTLPKDNPMRAK 219
>gi|226291794|gb|EEH47222.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 416
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 50 PARYRHH--------------RYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIG 95
PA+ +HH + SH + L+V +L WWTT+ D+ + G
Sbjct: 84 PAKQQHHQPQVQAPPQQGVKRKESHDDRSMDPDATTALFVSDLYWWTTDDDIRGWVNQAG 143
Query: 96 VP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELH--GRKPMVAY--PT 150
V D DV F E+ NG+SKG V S ++ + ++ + GRK V Y P+
Sbjct: 144 VENDLKDVTFSEHKVNGKSKGQAFVEFRSPQAATATKHKIESFNTQQSGRKYTVTYTHPS 203
Query: 151 RNVLYQFEAQNPLRSR 166
N NP+R++
Sbjct: 204 TNPFRTLPKDNPMRAK 219
>gi|326471529|gb|EGD95538.1| hypothetical protein TESG_03014 [Trichophyton tonsurans CBS 112818]
Length = 434
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGV-PDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV- 130
LYV +L WWTT+ ++ + GV D DV F E+ NG+SKG V S ++ ++
Sbjct: 139 LYVSDLHWWTTDDEVRGWVNKAGVEADLKDVTFSEHKVNGKSKGQAFVEFTSAQAATIAK 198
Query: 131 --MERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRS 165
+E + + + GRK V Y P N +NP+R
Sbjct: 199 HKIEEMNSAQQGGRKYSVTYTQPNINPFKTLPKENPMRG 237
>gi|357421081|ref|YP_004928530.1| RNP-1 RNA-binding protein [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
gi|354803591|gb|AER40705.1| RNP-1 RNA-binding protein [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
Length = 89
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+ LYVGNL++ TE ++ + SIG + F E+ SN +SKGF + + +EE+
Sbjct: 3 NTKLYVGNLSYEMTEQELKEHFESIGEVTHAKIIFDESTSNKRSKGFGFIEMSNEENAKK 62
Query: 130 VMERLPTLELHGRKPMVA 147
+E+L E GR +V+
Sbjct: 63 AIEKLNGTEFMGRNIIVS 80
>gi|326481829|gb|EGE05839.1| RRM domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 426
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGV-PDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV- 130
LYV +L WWTT+ ++ + GV D DV F E+ NG+SKG V S ++ ++
Sbjct: 131 LYVSDLHWWTTDDEVRGWVNKAGVEADLKDVTFSEHKVNGKSKGQAFVEFTSAQAATIAK 190
Query: 131 --MERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRS 165
+E + + + GRK V Y P N +NP+R
Sbjct: 191 HKIEEMNSAQQGGRKYSVTYTQPNINPFKTLPKENPMRG 229
>gi|224102367|ref|XP_002312652.1| predicted protein [Populus trichocarpa]
gi|222852472|gb|EEE90019.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVG L WWTT+A++ G ++KFF+ ++G+SKG+C V + + E
Sbjct: 219 LYVGELHWWTTDAELESFASQFGR--VKEIKFFDERASGKSKGYCQVDFYEAAAAAACKE 276
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEA 159
+ +GR +VA+ + L Q A
Sbjct: 277 GMNGHVFNGRPCVVAFASPQTLKQMGA 303
>gi|261749498|ref|YP_003257184.1| RNP-1 RNA-binding protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497591|gb|ACX84041.1| RNP-1 RNA-binding protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 90
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+ LYVGNL++ TE ++ SIG + F E+ SN +SKGF + + +EE+
Sbjct: 3 NTKLYVGNLSYEMTEQELKKYFESIGEVTHAKIIFDESTSNKRSKGFGFIEMSNEENAKQ 62
Query: 130 VMERLPTLELHGRKPMVA 147
+E+L E GR +V+
Sbjct: 63 AIEKLNGTEFMGRNIIVS 80
>gi|334188430|ref|NP_001190548.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009283|gb|AED96666.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 585
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG+L WWTT+A++ + G +VKFF+ ++G+SKG+C V + S +
Sbjct: 236 LFVGDLHWWTTDAELEAELCKYGA--VKEVKFFDEKASGKSKGYCQVEFYDPVAASACKD 293
Query: 133 RLPTLELHGRKPMVAYPT 150
L +GR +V Y +
Sbjct: 294 ALNGYPFNGRPCVVEYAS 311
>gi|327305963|ref|XP_003237673.1| hypothetical protein TERG_02389 [Trichophyton rubrum CBS 118892]
gi|326460671|gb|EGD86124.1| hypothetical protein TERG_02389 [Trichophyton rubrum CBS 118892]
Length = 416
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGV-PDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV- 130
LYV +L WWTT+ ++ + GV D DV F E+ NG+SKG V S ++ ++
Sbjct: 121 LYVSDLHWWTTDDEVRGWVNKAGVEADLKDVTFSEHKVNGKSKGQAFVEFTSAQAATIAK 180
Query: 131 --MERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRS 165
+E + + GRK V Y P N +NP+R
Sbjct: 181 HKIEEMNNAQQGGRKYSVTYTQPNINPFKTLPKENPMRG 219
>gi|395332243|gb|EJF64622.1| hypothetical protein DICSQDRAFT_166787 [Dichomitus squalens
LYAD-421 SS1]
Length = 384
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
H LY+G+L WWTT+ D+ S+GV D D+ F E+ NG+SKG V + E+ +
Sbjct: 115 HDALYIGDLQWWTTDEDLRQVAHSLGVNIDHKDITFSEHKVNGKSKGVAYVECHNPENAT 174
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
++ + R+ Y T
Sbjct: 175 ILKNWFDNNDFQNRRASANYTT 196
>gi|297844222|ref|XP_002889992.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335834|gb|EFH66251.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 573
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L WWTT+A++ + G ++KFF+ +G+SKG+C V + + E
Sbjct: 205 LFVGELHWWTTDAEIESVLSQYGR--VKEIKFFDERVSGKSKGYCQVEFYDSAAAASCKE 262
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSR 168
+ +G+ +VA+ + L Q A R++ +
Sbjct: 263 GMNGYIFNGKACVVAFASPETLKQMGANFTGRNQGQ 298
>gi|262340986|ref|YP_003283841.1| RNA-binding protein [Blattabacterium sp. (Blattella germanica) str.
Bge]
gi|262272323|gb|ACY40231.1| putative RNA-binding protein [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 90
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+ LYVGNL++ TE ++ SIG + F E+ SN +SKGF + + +EE+
Sbjct: 3 NTKLYVGNLSYDMTEQELKKYFESIGEVTHAKIIFDESTSNKRSKGFGFIEMSNEENAKQ 62
Query: 130 VMERLPTLELHGRKPMVA 147
+E+L E GR +V+
Sbjct: 63 AIEKLNGTEFMGRNIIVS 80
>gi|297796445|ref|XP_002866107.1| hypothetical protein ARALYDRAFT_495654 [Arabidopsis lyrata subsp.
lyrata]
gi|297311942|gb|EFH42366.1| hypothetical protein ARALYDRAFT_495654 [Arabidopsis lyrata subsp.
lyrata]
Length = 706
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L WWTT+A++ + G +VKFF+ ++G+SKGFC V + S +
Sbjct: 233 LFVGELHWWTTDAELEAELCKYGA--VKEVKFFDEKASGKSKGFCQVEFYDPMAASACKD 290
Query: 133 RLPTLELHGRKPMVAYPT 150
+ +GR +V Y +
Sbjct: 291 GMNGYAFNGRPCVVDYAS 308
>gi|301115672|ref|XP_002905565.1| RNA binding protein, putative [Phytophthora infestans T30-4]
gi|262110354|gb|EEY68406.1| RNA binding protein, putative [Phytophthora infestans T30-4]
Length = 322
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 49 SPARYRHHRYSHH-HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFEN 107
SP + RH R + TSS +YVGNL+W D+ D +++ G D V +
Sbjct: 51 SPYQARHVRNEEDVEMEQTSSVGSRVYVGNLSWSIKGQDLKDHMQAAGPVDLATVLEW-- 108
Query: 108 ASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRS 167
NG+SKG VT +EE+ + L EL GRK V EAQ ++
Sbjct: 109 --NGRSKGCGIVTYATEEAAQNAIATLNDTELGGRKIFVREDR-------EAQPTATTKP 159
Query: 168 RRSYR 172
+R YR
Sbjct: 160 KRGYR 164
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL+W ++ D +++ G DV +NG+SKG V +E+ + +
Sbjct: 165 VYVGNLSWNVKWQELKDHMKTAGTVVHADVLEL---ANGRSKGCGLVEYATEDEAAKAIA 221
Query: 133 RLPTLELHGR 142
L EL GR
Sbjct: 222 ELNNTELEGR 231
>gi|15240556|ref|NP_200378.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758601|dbj|BAB09234.1| unnamed protein product [Arabidopsis thaliana]
gi|332009282|gb|AED96665.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 710
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG+L WWTT+A++ + G +VKFF+ ++G+SKG+C V + S +
Sbjct: 236 LFVGDLHWWTTDAELEAELCKYGA--VKEVKFFDEKASGKSKGYCQVEFYDPVAASACKD 293
Query: 133 RLPTLELHGRKPMVAY 148
L +GR +V Y
Sbjct: 294 ALNGYPFNGRPCVVEY 309
>gi|356524362|ref|XP_003530798.1| PREDICTED: uncharacterized protein LOC100782869 [Glycine max]
Length = 668
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG+L WWTT+A++ + G +VKFF+ ++G+SKG+C V + + E
Sbjct: 203 LFVGDLHWWTTDAELETELSKYGP--VKEVKFFDEKASGKSKGYCQVEFFDPSAATACKE 260
Query: 133 RLPTLELHGRKPMVAYPT 150
+ +GR +VA+ +
Sbjct: 261 GMNGHVFNGRPCVVAFAS 278
>gi|242042437|ref|XP_002468613.1| hypothetical protein SORBIDRAFT_01g048990 [Sorghum bicolor]
gi|241922467|gb|EER95611.1| hypothetical protein SORBIDRAFT_01g048990 [Sorghum bicolor]
Length = 253
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 48 RSPARYRHHRYSHHHSQATSSSHC-NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
R A R + + S C + YVGNL+W TE D+ D RS + V+F
Sbjct: 150 RVTATSNKKRKAEFQTDPKKSEGCLSAYVGNLSWNVTEKDLRDFFRSSKI---ASVRFAI 206
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRN 152
+ G S+GFC V +ES+ + + EL GR VAY N
Sbjct: 207 DKRTGGSRGFCHVDFQDDESLEKAVA-MNQSELQGRPVKVAYSVSN 251
>gi|387907184|ref|YP_006337520.1| RNA-binding protein [Blattabacterium sp. (Blaberus giganteus)]
gi|387582077|gb|AFJ90855.1| RNA-binding protein [Blattabacterium sp. (Blaberus giganteus)]
Length = 90
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+ LYVGNL++ TE ++ S+G + + F E+ S+ +SKGF + + +EE+
Sbjct: 3 NTKLYVGNLSYDMTEQELKKYFESVGEVTHVKIIFDESTSSKRSKGFGFIEMSNEENAKQ 62
Query: 130 VMERLPTLELHGRKPMVA 147
+E+L EL GR +V+
Sbjct: 63 AIEKLNGTELMGRNIIVS 80
>gi|302657210|ref|XP_003020332.1| hypothetical protein TRV_05576 [Trichophyton verrucosum HKI 0517]
gi|291184156|gb|EFE39714.1| hypothetical protein TRV_05576 [Trichophyton verrucosum HKI 0517]
Length = 414
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGV-PDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV- 130
LYV +L WWTT+ ++ + GV D DV F E+ NG+SKG V S ++ ++
Sbjct: 119 LYVSDLHWWTTDDEVRGWVNKAGVEADLKDVTFSEHKVNGKSKGQAFVEFTSAQAATIAK 178
Query: 131 --MERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRS 165
+E + + GRK V Y P N +NP+R
Sbjct: 179 HKIEEMNNSQQGGRKYSVTYTQPNINPFKTLPKENPMRG 217
>gi|294894762|ref|XP_002774943.1| splice factor, putative [Perkinsus marinus ATCC 50983]
gi|294949797|ref|XP_002786345.1| splice factor, putative [Perkinsus marinus ATCC 50983]
gi|239880718|gb|EER06759.1| splice factor, putative [Perkinsus marinus ATCC 50983]
gi|239900565|gb|EER18141.1| splice factor, putative [Perkinsus marinus ATCC 50983]
Length = 250
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
H +YVGNL W T D+ D R G D I V E +G+SKGF T+ E
Sbjct: 131 HRLIYVGNLPWRTAWQDLKDLFRECG--DVIRVDMAE-GWDGRSKGFATILFQDPEGAQK 187
Query: 130 VMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRS 170
+E+ EL GRK V QF ++ +RSRRS
Sbjct: 188 AIEKYNGYELQGRKLFVRED------QFLKEDGTYTRSRRS 222
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
C +YVG+L + TE+ + D ++S G + +D+ +G+SKG V +EE+
Sbjct: 6 CCVYVGSLDFEVTESQLGDHMKSAGDVESVDILV---RRDGKSKGCALVEYKTEEAAEKA 62
Query: 131 MERLPTLELHGRKPMV 146
++ L E+ RK V
Sbjct: 63 IDTLNDTEVGKRKIFV 78
>gi|392594588|gb|EIW83912.1| hypothetical protein CONPUDRAFT_50628 [Coniophora puteana
RWD-64-598 SS2]
Length = 311
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+Y+G L WWTT+ D+ +++GV D D+ F E+ NG+SKG V GS ++ + V
Sbjct: 85 IYIGELQWWTTDEDLRQIAQNVGVSIDHRDITFSEHKVNGKSKGVAYVECGSFDNANTVK 144
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRS 165
+ H R+ V L NP R+
Sbjct: 145 NWFENNDFHNRRATV------TLTSSANGNPFRT 172
>gi|302505108|ref|XP_003014775.1| hypothetical protein ARB_07336 [Arthroderma benhamiae CBS 112371]
gi|291178081|gb|EFE33872.1| hypothetical protein ARB_07336 [Arthroderma benhamiae CBS 112371]
Length = 413
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGV-PDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV- 130
LYV +L WWTT+ ++ + GV D DV F E+ NG+SKG V S ++ ++
Sbjct: 118 LYVSDLHWWTTDDEVRGWVNKAGVEADLKDVTFSEHKVNGKSKGQAFVEFTSAQAATIAK 177
Query: 131 --MERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRS 165
+E + + GRK V Y P N +NP+R
Sbjct: 178 HKIEEMNNSQQGGRKYSVTYTQPNINPFKTLPKENPMRG 216
>gi|115477030|ref|NP_001062111.1| Os08g0490300 [Oryza sativa Japonica Group]
gi|42408488|dbj|BAD09668.1| putative cleavage and polyadenylation specific factor [Oryza sativa
Japonica Group]
gi|113624080|dbj|BAF24025.1| Os08g0490300 [Oryza sativa Japonica Group]
gi|125561991|gb|EAZ07439.1| hypothetical protein OsI_29693 [Oryza sativa Indica Group]
gi|125603835|gb|EAZ43160.1| hypothetical protein OsJ_27752 [Oryza sativa Japonica Group]
gi|215694980|dbj|BAG90171.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 603
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L WWTT+AD+ + G +V+FF+ ++G+SKG+C V + E
Sbjct: 185 LFVGELHWWTTDADLEAELIKYGP--VKEVRFFDEKASGKSKGYCQVDFYDPAVATACKE 242
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQF-EAQ 160
+ +GR +VA+ + N + + EAQ
Sbjct: 243 AMNGHLFNGRPCVVAFASPNSVRRMGEAQ 271
>gi|374290274|ref|YP_005037327.1| putative RNA-binding protein [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
gi|358377066|gb|AEU09254.1| putative RNA-binding protein [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
Length = 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+ LYVGNL++ TE ++ + SIG + F E+ SN +SKGF + + +EE+
Sbjct: 3 YTKLYVGNLSYDMTEQELKEYFESIGEVINAKIIFDESTSNKRSKGFGFIEMSNEENAKQ 62
Query: 130 VMERLPTLELHGRKPMVA 147
+E+L E GR +V+
Sbjct: 63 AIEKLNGTEFMGRNIIVS 80
>gi|115479739|ref|NP_001063463.1| Os09g0476100 [Oryza sativa Japonica Group]
gi|52077336|dbj|BAD46377.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113631696|dbj|BAF25377.1| Os09g0476100 [Oryza sativa Japonica Group]
gi|125606072|gb|EAZ45108.1| hypothetical protein OsJ_29744 [Oryza sativa Japonica Group]
gi|215712236|dbj|BAG94363.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 604
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L WWTT+AD+ + G +V+FF+ ++G+SKG+C V + + E
Sbjct: 187 LFVGELHWWTTDADLEAELSKYG--QVKEVRFFDEKASGKSKGYCQVDFYDPGAAASCKE 244
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQF-EAQ 160
+ +GR +VA+ + + + + EAQ
Sbjct: 245 GMNGHLFNGRPCVVAFASPHTVRRMGEAQ 273
>gi|125564102|gb|EAZ09482.1| hypothetical protein OsI_31754 [Oryza sativa Indica Group]
Length = 604
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L WWTT+AD+ + G +V+FF+ ++G+SKG+C V + + E
Sbjct: 187 LFVGELHWWTTDADLEAELSKYG--QVKEVRFFDEKASGKSKGYCQVDFYDPGAAASCKE 244
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQF-EAQ 160
+ +GR +VA+ + + + + EAQ
Sbjct: 245 GMNGHLFNGRPCVVAFASPHTVRRMGEAQ 273
>gi|356527151|ref|XP_003532176.1| PREDICTED: uncharacterized protein LOC100813702 [Glycine max]
Length = 693
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG+L WWTT+A++ + G +VKFF+ ++G+SKG+C V + + E
Sbjct: 228 LFVGDLHWWTTDAELEAELSKYGS--VKEVKFFDEKASGKSKGYCQVEFYEAFAATACKE 285
Query: 133 RLPTLELHGRKPMVAYPT 150
+ +GR +VA+ +
Sbjct: 286 GMNGHVFNGRPCVVAFAS 303
>gi|356566435|ref|XP_003551437.1| PREDICTED: uncharacterized protein LOC100811056 [Glycine max]
Length = 698
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG+L WWTT+A++ + G +VKFF+ ++G+SKG+C V + + E
Sbjct: 231 LFVGDLHWWTTDAELETELSRYGP--VKEVKFFDEKASGKSKGYCQVEFFDPSAATACKE 288
Query: 133 RLPTLELHGRKPMVAYPT 150
+ +GR +VA+ +
Sbjct: 289 GMNGHVFNGRPCVVAFAS 306
>gi|356566441|ref|XP_003551440.1| PREDICTED: uncharacterized protein LOC100813748 [Glycine max]
Length = 696
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG+L WWTT+A++ + G +VKFF+ ++G+SKG+C V + + E
Sbjct: 231 LFVGDLHWWTTDAELETELSRYGP--VKEVKFFDEKASGKSKGYCQVEFFDPSAATACKE 288
Query: 133 RLPTLELHGRKPMVAYPT 150
+ +GR +VA+ +
Sbjct: 289 GMNGHVFNGRPCVVAFAS 306
>gi|328865125|gb|EGG13511.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 662
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+Y+ +L WWTTE + G +K FEN NG+SKG+ V L S E E
Sbjct: 139 VYISSLDWWTTEQQLETFFAEFG--KLKTLKIFENELNGKSKGYAFVELSSNEQALQAKE 196
Query: 133 RLPTLELHGRK 143
+L +++GR+
Sbjct: 197 KLSDKQINGRE 207
>gi|169859840|ref|XP_001836557.1| hypothetical protein CC1G_10051 [Coprinopsis cinerea okayama7#130]
gi|116502370|gb|EAU85265.1| hypothetical protein CC1G_10051 [Coprinopsis cinerea okayama7#130]
Length = 305
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 63 SQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTL 121
+ ++ H +Y+G+L WWTT+ D+ S+GV D+ D+ F E+ NG+SKG +
Sbjct: 78 TDSSGGVHDAVYLGDLQWWTTDEDLRKVAASVGVNIDYKDITFSEHKVNGKSKGIAYIEC 137
Query: 122 GSEESMSLVMERLPTLELHGRK 143
S ++ + + + E R+
Sbjct: 138 HSPQAAATLKQWFDNNEFQNRR 159
>gi|239614137|gb|EEQ91124.1| RRM domain-containing protein [Ajellomyces dermatitidis ER-3]
gi|327353907|gb|EGE82764.1| RRM domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
Length = 419
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 57 RYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKG 115
+ SH A + L+V +L WWTT+ D+ + GV + + DV F E+ NG+SKG
Sbjct: 106 KESHDDRTADPDATTALFVSDLYWWTTDDDIRGWVNQAGVENELKDVTFSEHKVNGKSKG 165
Query: 116 FCTVTLGSEESMSLVMERLPTLELH--GRKPMVAY--PTRNVLYQFEAQNPLRSRSRRSY 171
V S ++ + ++ + RK V Y P N NP+R + R
Sbjct: 166 QAFVEFKSPQAATAAKHKIESFNTQQSSRKHTVTYTHPHTNPFRTLPKDNPMRGKDDRQA 225
Query: 172 R 172
R
Sbjct: 226 R 226
>gi|294924561|ref|XP_002778836.1| splice factor, putative [Perkinsus marinus ATCC 50983]
gi|239887640|gb|EER10631.1| splice factor, putative [Perkinsus marinus ATCC 50983]
Length = 247
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
H +YVGNL W T D+ D R G +DV +G+SKGF T+ E
Sbjct: 132 HRLIYVGNLPWRTAWQDLKDLFRECGEMIRVDVA---EGWDGRSKGFATILFQDAEGAQK 188
Query: 130 VMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRS 170
+E+ E GRK V QF ++ +RSRRS
Sbjct: 189 AIEKFNGYEFQGRKMFVRED------QFLKEDGTYTRSRRS 223
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
C +YVG+L + TE + D ++S G + +D+ +G+SKG V +EE+
Sbjct: 6 CCVYVGSLDFEVTETQLGDHMKSAGEVESVDIL---TRRDGRSKGCALVEYKTEEAAEKA 62
Query: 131 MERLPTLELHGRKPMV 146
++ L E+ RK V
Sbjct: 63 IDTLNDTEVGTRKIFV 78
>gi|294931650|ref|XP_002779959.1| splice factor, putative [Perkinsus marinus ATCC 50983]
gi|239889720|gb|EER11754.1| splice factor, putative [Perkinsus marinus ATCC 50983]
Length = 247
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
H +YVGNL W T D+ D R G +DV +G+SKGF T+ E
Sbjct: 132 HRLIYVGNLPWRTAWQDLKDLFRECGEMIRVDVA---EGWDGRSKGFATILFQDAEGAQK 188
Query: 130 VMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRS 170
+E+ E GRK V QF ++ +RSRRS
Sbjct: 189 AIEKFNGYEFQGRKMFVRED------QFLKEDGTYTRSRRS 223
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
C +YVG+L + TE + D ++S G + +D+ +G+SKG V +EE+
Sbjct: 6 CCVYVGSLDFEVTETQLGDHMKSAGEVESVDIL---TRRDGRSKGCALVEYKTEEAAEKA 62
Query: 131 MERLPTLELHGRKPMV 146
++ L E+ RK V
Sbjct: 63 IDTLNDTEVGTRKIFV 78
>gi|261204649|ref|XP_002629538.1| RRM domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239587323|gb|EEQ69966.1| RRM domain-containing protein [Ajellomyces dermatitidis SLH14081]
Length = 419
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 57 RYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKG 115
+ SH A + L+V +L WWTT+ D+ + GV + + DV F E+ NG+SKG
Sbjct: 106 KESHDDRTADPDATTALFVSDLYWWTTDDDIRGWVNQAGVENELKDVTFSEHKVNGKSKG 165
Query: 116 FCTVTLGSEESMSLVMERLPTLELH--GRKPMVAY--PTRNVLYQFEAQNPLRSRSRRSY 171
V S ++ + ++ + RK V Y P N NP+R + R
Sbjct: 166 QAFVEFKSPQAATAAKHKIESFNTQQSSRKHTVTYTHPHTNPFRTLPKDNPMRGKDDRQA 225
Query: 172 R 172
R
Sbjct: 226 R 226
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + ++ A G + +D K + G+S+GF VT GSEESM +E
Sbjct: 9 FVGGLAWATDDNNLQQAFSQYG--EILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 67 MNGKELDGRNITV 79
>gi|449462395|ref|XP_004148926.1| PREDICTED: uncharacterized protein LOC101212739 [Cucumis sativus]
Length = 699
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG+L WWTT+A++ + G +VKF++ ++G+SKG+C V + + E
Sbjct: 222 LFVGDLHWWTTDAELEVELCKYGP--LKEVKFYDEKASGKSKGYCQVEFYDSSAATACKE 279
Query: 133 RLPTLELHGRKPMVAY 148
+ +GR +VAY
Sbjct: 280 GMNGHIFNGRPCVVAY 295
>gi|66811328|ref|XP_639372.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60468005|gb|EAL66016.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 952
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+ L WWTT+ + + G + +K FEN +NG+SKG+ V E L
Sbjct: 165 LYISGLEWWTTDQQLENVFLEFGK--IVTLKIFENENNGKSKGYAFVEFEHIEQAQLAKS 222
Query: 133 RLPTLELHGRKPMV 146
+ E++G++ +
Sbjct: 223 KTEKKEINGKEMTI 236
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + ++ A G + +D K + G+S+GF VT GSEESM +E
Sbjct: 9 FVGGLAWATDDHNLQAAFSQYG--EILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 134 LPTLELHGRKPMV 146
+ EL GR+ V
Sbjct: 67 MNGKELDGRQVTV 79
>gi|145352538|ref|XP_001420598.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580833|gb|ABO98891.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 231
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YV +LTWWTT+A++ + G + FF + + G+SKG C V + ++ + E
Sbjct: 63 VYVASLTWWTTDAELEAILGEFG--RVKSLTFFADKATGKSKGCCAVEFATADAAAQCKE 120
Query: 133 RLPTLELHGRKPMVAY 148
L E++G+ +V +
Sbjct: 121 NLHGKEINGKSCVVTF 136
>gi|449506411|ref|XP_004162742.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101212739
[Cucumis sativus]
Length = 724
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG+L WWTT+A++ + G +VKF++ ++G+SKG+C V + + E
Sbjct: 247 LFVGDLHWWTTDAELEVELCKYGP--LKEVKFYDEKASGKSKGYCQVEFYDSSAATACKE 304
Query: 133 RLPTLELHGRKPMVAY 148
+ +GR +VAY
Sbjct: 305 GMNGHIFNGRPCVVAY 320
>gi|449462397|ref|XP_004148927.1| PREDICTED: uncharacterized protein LOC101212980 [Cucumis sativus]
Length = 697
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG+L WWTT+A++ + G +VKF++ ++G+SKG+C V + + E
Sbjct: 222 LFVGDLHWWTTDAELEVELCKYGP--LKEVKFYDEKASGKSKGYCQVEFYDPSAATACKE 279
Query: 133 RLPTLELHGRKPMVAY 148
+ +GR +VAY
Sbjct: 280 GMNGHIFNGRPCVVAY 295
>gi|449516543|ref|XP_004165306.1| PREDICTED: uncharacterized LOC101212980 [Cucumis sativus]
Length = 697
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG+L WWTT+A++ + G +VKF++ ++G+SKG+C V + + E
Sbjct: 222 LFVGDLHWWTTDAELEVELCKYGP--LKEVKFYDEKASGKSKGYCQVEFYDPSAATACKE 279
Query: 133 RLPTLELHGRKPMVAYPT 150
+ +GR +VAY +
Sbjct: 280 GMNGHIFNGRPCVVAYAS 297
>gi|449668086|ref|XP_004206708.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7-like [Hydra magnipapillata]
Length = 106
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 81 WTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
WT + ++S+AIR GV D +++KFFEN NGQSKG
Sbjct: 72 WTNDEELSNAIRECGVNDLLNIKFFENRINGQSKG 106
>gi|115450405|ref|NP_001048803.1| Os03g0123200 [Oryza sativa Japonica Group]
gi|25446691|gb|AAN74838.1| Unknown protein [Oryza sativa Japonica Group]
gi|108705923|gb|ABF93718.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113547274|dbj|BAF10717.1| Os03g0123200 [Oryza sativa Japonica Group]
gi|125584746|gb|EAZ25410.1| hypothetical protein OsJ_09226 [Oryza sativa Japonica Group]
gi|215694916|dbj|BAG90107.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 252
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 48 RSPARYRHHRYSHHHSQATSSSHC-NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
R A + R + + C + YVGNL W TE D+ D +S+ + ++F
Sbjct: 149 RLAAGSKRKRTVEFQTDPKKADGCLSAYVGNLKWDVTETDLRDFFKSLKIS---SIRFAI 205
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRN 152
N G S+GFC V +ES+ + + EL GR ++Y N
Sbjct: 206 NKRTGDSRGFCHVDFEDDESLEKAVG-MNQSELRGRPIKISYAVSN 250
>gi|302754352|ref|XP_002960600.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
gi|302771648|ref|XP_002969242.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300162718|gb|EFJ29330.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300171539|gb|EFJ38139.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
Length = 197
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+ LYVGN+ W ++D +G+ + +V + + G+S+GF VTL +E++
Sbjct: 17 NTKLYVGNIAWNVDSKMLADCFNGVGITELEEVMY--DRMLGKSRGFAFVTLSTEDAAKT 74
Query: 130 VMERLPTLELHGRKPMVAYP 149
+E+L EL GR V YP
Sbjct: 75 AIEKLDGHELEGRPLRVNYP 94
>gi|345565930|gb|EGX48877.1| hypothetical protein AOL_s00079g98 [Arthrobotrys oligospora ATCC
24927]
Length = 460
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 5 DDAILGMGPTDTNTSP--GEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHH 62
DD G ++ N + G T + ++ D+V +P P+ + + +H H
Sbjct: 36 DDGKPDTGKSNGNAAAANGTTEDTNMEGANVTDNVKQEPIPQPPQHNSLKRKHPDNRHVD 95
Query: 63 SQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTL 121
AT++ LY+ L WWTT+ D+ IR D + D+ F E+ NG+SKG V
Sbjct: 96 VNATTA----LYISELNWWTTDDDIRGWIRQADCEDELKDITFSEHKVNGKSKGVAFVEF 151
Query: 122 GSEESMSLVMERL 134
+ ++ S ++
Sbjct: 152 TTTQASSATKAKI 164
>gi|125542191|gb|EAY88330.1| hypothetical protein OsI_09789 [Oryza sativa Indica Group]
Length = 252
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 48 RSPARYRHHRYSHHHSQATSSSHC-NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
R A + R + + C + YVGNL W TE D+ D +S+ + ++F
Sbjct: 149 RLAAGSKRKRTVEFQTDPKKADGCLSAYVGNLKWDVTETDLRDFFKSLKIS---SIRFAI 205
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRN 152
N G S+GFC V +ES+ + + EL GR ++Y N
Sbjct: 206 NKRTGDSRGFCHVDFEDDESLEKAVG-MNQSELRGRPIKISYAVSN 250
>gi|168029395|ref|XP_001767211.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681466|gb|EDQ67892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 192
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LY+GNL W A ++ + G + ++V + + +G+S+GF VT+ ++E V+
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIY--DQESGRSRGFAFVTMATQEDAENVI 58
Query: 132 ERLPTLELHGRKPMVAYP 149
ERL ++ GR V++P
Sbjct: 59 ERLDGHDVGGRPLKVSFP 76
>gi|328772428|gb|EGF82466.1| hypothetical protein BATDEDRAFT_86274 [Batrachochytrium
dendrobatidis JAM81]
Length = 586
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 52 RYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNG 111
R+ H + + A +S L+VGNL + ++ D RS+G+P ++ +S+G
Sbjct: 396 RHEHGYGNRSENYAMKNSGITLFVGNLVYSVIWQELKDLFRSVGIPTKAEIV---TSSSG 452
Query: 112 QSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMV 146
+S+GF VT+ ++E + ++ L E GRK V
Sbjct: 453 RSRGFGFVTMATQEDANKAIKELNGTEFRGRKIEV 487
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 60 HHHSQATSSSHCNLYVGNLTWWTTEADMSDAI-RSIGVPDFIDVKFFENASNGQSKGFCT 118
HHH + +++GNL + D+ D ++ GV VK + NG+S+GF
Sbjct: 8 HHHGNDQPVAGRQVFIGNLPFTMQSKDLKDVFNKTAGV---TSVKVMSHG-NGRSRGFGL 63
Query: 119 VTLGSEESMSLVMERLPTLELHGRKPMV 146
V + E ++ + LEL GR+ V
Sbjct: 64 VYCDTPEIAQSIITQFQGLELKGRQIEV 91
>gi|296413429|ref|XP_002836416.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630234|emb|CAZ80607.1| unnamed protein product [Tuber melanosporum]
Length = 433
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYV +L WWTT+ D+ + G D + D+ F E+ NG+SKG V S ++ + V
Sbjct: 97 LYVADLHWWTTDDDIRGWVNECGCEDELKDITFSEHKVNGKSKGVAFVEFTSPQAATAVK 156
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRS 165
+ +E+ G +P V Y + NP R+
Sbjct: 157 NK---IEVGGSQPAYMGKRHTVSYTNPSINPFRT 187
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + ++ A G + +D K + G+S+GF VT GSEESM +E
Sbjct: 9 FVGGLAWATDDHNLQAAFSQYG--EILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 67 MNGKELDGRSITV 79
>gi|426199020|gb|EKV48945.1| hypothetical protein AGABI2DRAFT_191111 [Agaricus bisporus var.
bisporus H97]
Length = 328
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTV 119
SH LYVG+L WWTT+ D+ +IG+ D D+ F E+ NG+SKG V
Sbjct: 108 AGQSHDALYVGDLQWWTTDEDLRQVALTIGITIDHKDITFSEHKVNGKSKGIAYV 162
>gi|409077685|gb|EKM78050.1| hypothetical protein AGABI1DRAFT_114885 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 329
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTV 119
SH LYVG+L WWTT+ D+ +IG+ D D+ F E+ NG+SKG V
Sbjct: 108 AGQSHDALYVGDLQWWTTDEDLRQVALTIGITIDHKDITFSEHKVNGKSKGIAYV 162
>gi|328860469|gb|EGG09575.1| hypothetical protein MELLADRAFT_115746 [Melampsora larici-populina
98AG31]
Length = 465
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
C LYV L W+T++ D+ +GV D+ F E+ NG+SKG + S+
Sbjct: 156 CGLYVAELQWYTSDEDLRKMAEELGVRIAHRDITFSEHKVNGKSKGIAYMEFASQADADK 215
Query: 130 VMERLPTLELHGRK-------PMVAYPTRNV 153
V L E+H RK PM P RN
Sbjct: 216 VKRWLDVNEIHDRKSQCNLSPPMNGMPFRNA 246
>gi|392564164|gb|EIW57342.1| hypothetical protein TRAVEDRAFT_29466 [Trametes versicolor
FP-101664 SS1]
Length = 373
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LY+G+L WWTT+ D+ ++GV D D+ F E+ NG+SKG + + + +
Sbjct: 115 LYIGDLQWWTTDEDLRQVALTLGVVLDHKDITFSEHKVNGKSKGIAYIECHGAANATTLK 174
Query: 132 ERLPTLELHGRKPMVAY 148
E + E R+ Y
Sbjct: 175 EWFDSNEFQNRRASATY 191
>gi|389749777|gb|EIM90948.1| hypothetical protein STEHIDRAFT_107644 [Stereum hirsutum FP-91666
SS1]
Length = 398
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVG+L WWTT+ D+ ++ V D D+ F E+ NG+SKG + GS E+ +
Sbjct: 110 LYVGDLQWWTTDEDLRKVALNVNVTVDHKDITFSEHKVNGKSKGVAYIECGSHENALALK 169
Query: 132 ERLPTLELHGRK 143
L + R+
Sbjct: 170 NWLDNNDFQNRR 181
>gi|133249|sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|100390|pir||S12111 ribonucleoprotein, 33K, precursor - common tobacco
gi|20005|emb|CAA37879.1| unnamed protein product [Nicotiana tabacum]
Length = 324
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYV NL+W T + DA P F+ K + S+G+S+GF +T S E+M+ +
Sbjct: 218 KLYVANLSWALTSQGLRDAFAD--QPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSAL 275
Query: 132 ERLPTLELHGR 142
+ + +EL GR
Sbjct: 276 DTMNEVELEGR 286
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL + T + +S+ G +++ + + +S+GF VT+GS E +
Sbjct: 116 LYVGNLPFSMTSSQLSEIFAEAGTVANVEIVY--DRVTDRSRGFAFVTMGSVEEAKEAIR 173
Query: 133 RLPTLELHGRKPMVAYP 149
++ GR V +P
Sbjct: 174 LFDGSQVGGRTVKVNFP 190
>gi|302762759|ref|XP_002964801.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
gi|300167034|gb|EFJ33639.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
Length = 127
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R + +A C LYV L W + + A G D ID K N G+SKG
Sbjct: 5 NRVLRNRPKARYMRACKLYVNGLAWGVDDLSLRGAFEEFG--DVIDTKVMTNPDTGRSKG 62
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNP 162
F VT E+ +E + + GR V Y Q QNP
Sbjct: 63 FGFVTFKREDEAKEALESMDGKDFAGRSIRVDYAKTQKEMQ---QNP 106
>gi|311952|emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
Length = 319
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYV NL+W T + DA P F+ K + S+G+S+GF +T S E+M +
Sbjct: 213 KLYVANLSWALTSQGLRDAFAD--QPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMKSAL 270
Query: 132 ERLPTLELHGR 142
+ + +EL GR
Sbjct: 271 DTMNEVELEGR 281
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL + T + +S+ G +++ + + +S+GF VT+GS E +
Sbjct: 111 LYVGNLPFSMTSSQLSEIFAEAGTVANVEIVY--DRVTDRSRGFAFVTMGSVEEAKEAIR 168
Query: 133 RLPTLELHGRKPMVAYP 149
++ GR V +P
Sbjct: 169 LFDGSQVGGRTVKVNFP 185
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++GNL+W TT+ + DA R G + + K + +G+S+GF VT ++ M +E
Sbjct: 9 CFIGNLSWSTTDESLKDAFRKFG--NVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIE 66
Query: 133 RLPTLELHGR-------KPMVAYPTRNVLYQFEAQNPLRS 165
+ L+L GR +P A RN ++ R+
Sbjct: 67 DMNGLDLDGRAITVDKAQPQGAGRDRNGDRDYDRDRGSRN 106
>gi|302684967|ref|XP_003032164.1| hypothetical protein SCHCODRAFT_85193 [Schizophyllum commune H4-8]
gi|300105857|gb|EFI97261.1| hypothetical protein SCHCODRAFT_85193 [Schizophyllum commune H4-8]
Length = 335
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LY+G+L WWTT+ D+ ++GV D + F E+ NG+SKG + GS E+ + +
Sbjct: 106 LYIGDLQWWTTDEDLRQVALNVGVNIDHKYITFSEHKVNGKSKGIAYIECGSHENAAAIK 165
Query: 132 ERLPTLELHGRKPMVAY 148
+ R+ ++
Sbjct: 166 NWFDNNDFQNRRANASF 182
>gi|294871774|ref|XP_002766035.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239866600|gb|EEQ98752.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 224
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL W T D+ D R G +D+ +G+SKGF TV EE + +E
Sbjct: 147 VYVGNLPWRTAWQDLKDLFRECGEVIRVDIA---EGWDGRSKGFATVLFEDEEGTAKAIE 203
Query: 133 RLPTLELHGRKPMV 146
+ + GRK +V
Sbjct: 204 KFNEYDFQGRKLLV 217
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
S C +YVGNL W TE ++ D ++++G +++ +G+SKG V
Sbjct: 2 ASQEKC-VYVGNLDWTITEDELGDHMKAVGPVVSVEIM---TRHDGKSKGCGIVEFKEAS 57
Query: 126 SMSLVMERLPTLELHGRKPMV 146
S+ ++ L +L RK V
Sbjct: 58 SVDKAIDTLNETQLGERKIFV 78
>gi|336370383|gb|EGN98723.1| hypothetical protein SERLA73DRAFT_54767 [Serpula lacrymans var.
lacrymans S7.3]
Length = 323
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
LY+G+L WWTT+ D+ ++GV D D+ F E+ NG+SKG + S E+ + V
Sbjct: 93 LYIGDLQWWTTDEDLRQVAHNVGVSIDHKDITFSEHKVNGKSKGIAYIECDSYENAAAV 151
>gi|119192012|ref|XP_001246612.1| hypothetical protein CIMG_00383 [Coccidioides immitis RS]
gi|392864156|gb|EJB10760.1| RRM domain-containing protein [Coccidioides immitis RS]
Length = 406
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLV- 130
LY+ +L WWTT+ ++ I + G + DV F E+ NG+SKG V S ++ +
Sbjct: 111 LYISDLYWWTTDDEIRGWINAAGCEGELKDVTFSEHKVNGKSKGQAFVEFTSPQAATAAK 170
Query: 131 --MERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSRRS 170
+E L + RK V Y P N NP+R + RS
Sbjct: 171 HQIESLNAAQQSARKYSVNYTQPHTNPFRTLPKDNPMRGKDDRS 214
>gi|353237393|emb|CCA69367.1| related to heterogeneous nuclear ribonucleoprotein HRP1
[Piriformospora indica DSM 11827]
Length = 297
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LY+G+L WWTT+ D+ +G+ D+ F E+ NG+SKG + S E+ +++
Sbjct: 75 LYLGDLNWWTTDEDLRGVASQVGIELSLKDITFSEHKVNGKSKGIAYIECHSHENATILK 134
Query: 132 ERLPTLELHGRK 143
E RK
Sbjct: 135 EFFDNNTFQNRK 146
>gi|171684531|ref|XP_001907207.1| hypothetical protein [Podospora anserina S mat+]
gi|170942226|emb|CAP67878.1| unnamed protein product [Podospora anserina S mat+]
Length = 324
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 73 LYVGNLTWWTTEADMSD-AIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + L WWTT+ D+ A+++ + D+ F E+ NG+SKG V S+++ + V
Sbjct: 41 LLINELNWWTTDDDIRGWAVQAQCEAELKDITFSEHKVNGKSKGQAYVEFTSQQAATAVK 100
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRS 165
R+ +L +P PT +Y + NP R+
Sbjct: 101 HRIESLANEPNQPASKRPT--AIYNNPSFNPFRT 132
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + ++ A + G + +D K ++ G+S+GF VT +EESM +E
Sbjct: 7 FVGGLAWATDDHNLQSAFSNFG--EILDAKIIQDRETGRSRGFGFVTFATEESMQAAIEG 64
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 65 MNGKELDGRSITV 77
>gi|344299844|gb|EGW30197.1| hypothetical protein SPAPADRAFT_63810 [Spathaspora passalidarum
NRRL Y-27907]
Length = 433
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
C ++VGNL + + D +R G DV+ + G+S+GF TV G+EE +
Sbjct: 229 CEIFVGNLPFSINWQALKDLMRKAGDVIRADVRM---DNWGKSRGFGTVVFGTEEEANKA 285
Query: 131 MERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRSYR 172
+E E+ GRK + P RN Q A N + R SYR
Sbjct: 286 VEMFQGYEIEGRK-LDTRPGRN---QSSASNGSNTSDRSSYR 323
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L++G L W T E + DA S G DVK + G+S+GF V S +
Sbjct: 43 SSSKLFIGGLAWATDENTLRDAFGSFGTV--TDVKIILDRDTGRSRGFGFVNFTSPQEAE 100
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
+ ++ + EL GR+ V Y T
Sbjct: 101 VALQEMDGRELAGRQIRVDYAT 122
>gi|308809864|ref|XP_003082241.1| hydroxymethylpyrimidine kinase (ISS) [Ostreococcus tauri]
gi|116060709|emb|CAL57187.1| hydroxymethylpyrimidine kinase (ISS) [Ostreococcus tauri]
Length = 669
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YV +LTWWTT+A++ + G + FF + + G+SKG C V + ++ + E
Sbjct: 159 VYVASLTWWTTDAELEGILAEFG--RVKSLTFFADKATGKSKGCCAVEFTTSDAAAACKE 216
Query: 133 RLPTLELHGRKPMVAY 148
+L +++G+ +V +
Sbjct: 217 KLHGRQINGKACVVTF 232
>gi|294941778|ref|XP_002783235.1| RNA recognition motif, putative [Perkinsus marinus ATCC 50983]
gi|239895650|gb|EER15031.1| RNA recognition motif, putative [Perkinsus marinus ATCC 50983]
Length = 139
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL W T D+ D R G +D+ +G+SKGF TV EE + +E
Sbjct: 62 VYVGNLPWRTAWQDLKDLFRECGEVIRVDIA---EGWDGRSKGFATVLFEDEEGTAKAIE 118
Query: 133 RLPTLELHGRKPMV 146
+ + GRK +V
Sbjct: 119 KFNEYDFQGRKLLV 132
>gi|328350511|emb|CCA36911.1| Polyadenylate-binding protein 1 [Komagataella pastoris CBS 7435]
Length = 413
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++VGNL + T D++D G D++D++ G+SKGF TV E ++ ++
Sbjct: 193 IFVGNLPFRTQRKDLADLFGRFGGIDYVDIRL---DRLGRSKGFGTVVFKKPEDSAIALK 249
Query: 133 RLPTLELHGRK 143
L +L GRK
Sbjct: 250 ELQGFQLDGRK 260
>gi|254565999|ref|XP_002490110.1| Poly(A+) RNA-binding protein, involved in the export of mRNAs from
the nucleus to the cytoplasm [Komagataella pastoris
GS115]
gi|238029906|emb|CAY67829.1| Poly(A+) RNA-binding protein, involved in the export of mRNAs from
the nucleus to the cytoplasm [Komagataella pastoris
GS115]
Length = 445
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++VGNL + T D++D G D++D++ G+SKGF TV E ++ ++
Sbjct: 225 IFVGNLPFRTQRKDLADLFGRFGGIDYVDIRL---DRLGRSKGFGTVVFKKPEDSAIALK 281
Query: 133 RLPTLELHGRK 143
L +L GRK
Sbjct: 282 ELQGFQLDGRK 292
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
Query: 42 FPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFID 101
F HTG P R + +++ +++GNL + + + D SIG D
Sbjct: 95 FKAHTGGPPGRDFKMKSDRDYTKG-------VFIGNLPFQCSWQQLKDHFSSIGEVHRAD 147
Query: 102 VKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
+ G+S+G TV +EE + L +E+L
Sbjct: 148 IV----TERGRSRGMGTVEFVNEEDVKLAIEKL 176
>gi|291286869|ref|YP_003503685.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884029|gb|ADD67729.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
Length = 89
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+YVGNL++ T E D+S IG D V+ + G+SKGF V + + + +
Sbjct: 2 NIYVGNLSYSTNEDDISALFSKIGEVD--SVRIITDRDTGRSKGFGFVEMANSDQAKAAI 59
Query: 132 ERLPTLELHGRKPMV--AYPTRN 152
++L EL GR V A P N
Sbjct: 60 DKLNETELDGRNLTVNEAKPKNN 82
>gi|348666125|gb|EGZ05953.1| hypothetical protein PHYSODRAFT_348578 [Phytophthora sojae]
Length = 356
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 21/115 (18%)
Query: 49 SPARYRHHRYSHHHSQA-----------------TSSSHCNLYVGNLTWWTTEADMSDAI 91
SP RH R+ QA ++ C +YVGNL+W D+ D +
Sbjct: 50 SPYPARHARHGTQQQQAGPILEQRGEDDDVDMEQAAAVGCRVYVGNLSWSIKWQDLKDHM 109
Query: 92 RSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMV 146
++ G + V SNG+SKG VT +EE+ + L EL GRK V
Sbjct: 110 QAAGPVELATVL----ESNGRSKGCGIVTYETEEAAQNAIATLNDTELGGRKIFV 160
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVGNL W T + D R++G + D+ + +G+S+GF + + +
Sbjct: 279 QLYVGNLPWETNWQQLKDLFRTVGDVERADIAEY---PDGRSRGFGIIRYTNAADAWQAI 335
Query: 132 ERLPTLELHGR 142
ERL LE+ GR
Sbjct: 336 ERLNGLEIEGR 346
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 54 RHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQS 113
R R + S +YVGNL+W ++ D ++ G DV NG+S
Sbjct: 161 REDREAQPVSAVKPKRGFRVYVGNLSWNVKWQELKDHMKKAGTVVHADVL---EEPNGRS 217
Query: 114 KGFCTVTLGSEESMSLVMERLPTLELHGR 142
KG V ++E + + L EL GR
Sbjct: 218 KGCGLVEYATQEEAAKAIAELNNTELEGR 246
>gi|402072834|gb|EJT68520.1| RRM domain-containing protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 418
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGV-PDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+ + L WWTT+ D+ IR G + D+ F E+ NG+SKG + L S+++ + V
Sbjct: 95 IMISELNWWTTDDDIRGWIRDAGCEAELKDITFSEHKVNGKSKGQVYIELKSQQAATAVK 154
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRS 165
R+ + T VLY NP R+
Sbjct: 155 HRVEAQQSDDANAQTKRQT--VLYSPPTVNPFRT 186
>gi|357119387|ref|XP_003561423.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 161
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + DA S G + ID K + G+S+GF VT SE+SM +E
Sbjct: 9 FVGGLAWATDDRGLQDAFSSFG--EIIDSKIINDRETGRSRGFGFVTFASEQSMRDAIEG 66
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 67 MNGKDLDGRNITV 79
>gi|225433269|ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
Length = 751
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A S + LY GNL + A ++ I++ G P+ ++V + N G+S+GF VT+ S
Sbjct: 105 AESPVNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLY--NRDTGRSRGFAFVTMSSV 162
Query: 125 ESMSLVMERLPTLELHGRKPMVAY 148
E + V+E L E GR V +
Sbjct: 163 EDCNAVIENLDGSEYGGRTLRVNF 186
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VGNL+W T ++ + G + I + + G+S+G+ V ++ M +E
Sbjct: 204 LFVGNLSWSVTSESLNQVFQEYG--NVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALE 261
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQNP 162
L +EL GR V YQ Q P
Sbjct: 262 SLNGVELEGRAIRVGAYFVGQYYQVLQQQP 291
>gi|303313175|ref|XP_003066599.1| hypothetical protein CPC735_058240 [Coccidioides posadasii C735
delta SOWgp]
gi|240106261|gb|EER24454.1| hypothetical protein CPC735_058240 [Coccidioides posadasii C735
delta SOWgp]
gi|320036509|gb|EFW18448.1| hypothetical protein CPSG_05134 [Coccidioides posadasii str.
Silveira]
Length = 406
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGV-PDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV- 130
LY+ +L WWTT+ ++ + + G + DV F E+ NG+SKG V S ++ +
Sbjct: 111 LYISDLYWWTTDDEIRGWVNAAGCESELKDVTFSEHKVNGKSKGQAFVEFTSPQAATAAK 170
Query: 131 --MERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSRRS 170
+E L + RK V Y P N NP+R + RS
Sbjct: 171 HQIESLNAAQQSARKYSVNYTQPHTNPFRTLPKDNPMRGKDDRS 214
>gi|388583201|gb|EIM23503.1| hypothetical protein WALSEDRAFT_67167 [Wallemia sebi CBS 633.66]
Length = 89
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIG-VPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
+ +Y+ NL+W T + D++ A G + D+I +K + G+S+GF VT ++ S
Sbjct: 4 NSKIYISNLSWSTNDEDLARAFSPFGQISDYIVMK---DRQTGRSRGFGFVTYANDREAS 60
Query: 129 LVMERLPTLELHGRKPMVAYP 149
+E + +EL GR+ V Y
Sbjct: 61 SALESMNEVELDGRRIRVNYA 81
>gi|168054234|ref|XP_001779537.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669018|gb|EDQ55613.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 194
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL W A +++ I + +DV + + +G+S+GF VT+ + E V++
Sbjct: 2 LYVGNLPWTCDSAQLAEICGDISSVEAVDVVY--DQQSGRSRGFAFVTMSTNEGAQSVID 59
Query: 133 RLPTLELHGRKPMVAYP 149
RL + GR V++P
Sbjct: 60 RLDGSDFGGRPLKVSFP 76
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 54 RHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQS 113
R R S + +++GNL+W + G +D K + G+S
Sbjct: 97 RSDRPPRQGSDRVLDNTNKMFIGNLSWSCDADALVQVFSEYG--SVVDAKVVYDRDTGKS 154
Query: 114 KGFCTVTLGSEESMSLVMERLPTLELHGRKPMVA 147
+GF VT+ + +S ++ L E GR+ V+
Sbjct: 155 RGFGFVTMSAASEVSNAVQNLDGAEFEGREMRVS 188
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L+VG L W TT+ ++ +A + G + +VK + G+S+GF VT +++
Sbjct: 40 SGSKLFVGGLAWGTTDDNIKEAFSAFG--EVTEVKIICDRDTGRSRGFGFVTFATDQDAE 97
Query: 129 LVMERLPTLELHGRKPMVAYPTRN 152
++ L +L GR V Y T+
Sbjct: 98 AALQALDGRDLAGRTIRVNYATKQ 121
>gi|449018258|dbj|BAM81660.1| similar to nucleolar RNA-binding protein [Cyanidioschyzon merolae
strain 10D]
Length = 406
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
++++GN+ + E ++ G ++V+ +A G KGF VT E +M L +
Sbjct: 185 SIFIGNVPFTANEEEIRSVFSDCGA--ILNVRIVRDAQTGMGKGFAYVTFAPEANMDLAL 242
Query: 132 ERLPTLELHGR 142
R T++LHGR
Sbjct: 243 SRHETVQLHGR 253
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L+VG L W TT+ ++ +A + G + +VK + G+S+GF VT +++
Sbjct: 40 SGSKLFVGGLAWGTTDDNIKEAFSAFG--EVTEVKIICDRDTGRSRGFGFVTFATDQDAE 97
Query: 129 LVMERLPTLELHGRKPMVAYPTRN 152
++ L +L GR V Y T+
Sbjct: 98 AALQALDGRDLAGRTIRVNYATKQ 121
>gi|116781814|gb|ABK22250.1| unknown [Picea sitchensis]
Length = 355
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 42 FPE----HTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVP 97
FPE GRSPAR + S H +YVGNL W T + +A+ G
Sbjct: 242 FPEVPRLQNGRSPARS-----PSNFGGFVDSPH-KVYVGNLAWSVTSETLREALNGKG-- 293
Query: 98 DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGR 142
+ + K ++ G+S+GF V+ SE + + + LE+ GR
Sbjct: 294 NVLGAKVIQDRETGRSRGFGFVSFSSEAEVEAAVSEMDGLEVEGR 338
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVGNL + ++ GV + ++V + + S+G+S+GF VT+ + E +
Sbjct: 168 KLYVGNLPFDIDSEGLAKMFDESGVVEMVEVIY--DRSSGRSRGFAFVTMSTVEEAEAAI 225
Query: 132 ERLPTLELHGRKPMVAYP 149
++ E+ GR V +P
Sbjct: 226 KKFNGFEIDGRSLRVNFP 243
>gi|296804226|ref|XP_002842965.1| RRM domain-containing protein [Arthroderma otae CBS 113480]
gi|238845567|gb|EEQ35229.1| RRM domain-containing protein [Arthroderma otae CBS 113480]
Length = 412
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGV-PDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV- 130
LY+ +L WWTT+ ++ + G D DV F E+ NG+SKG V S ++ +
Sbjct: 116 LYISDLHWWTTDDEIRGWVNQAGAEADLKDVTFSEHKVNGKSKGQAFVEFTSAQAATAAK 175
Query: 131 --MERLPTLELHGRKPMVAYPTRNV--LYQFEAQNPLRS 165
+E + + RK VAY N+ +NP+R
Sbjct: 176 HRIEEMNNAQQGARKYAVAYTQANINPFKTLPKENPMRG 214
>gi|294948938|ref|XP_002785970.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239900078|gb|EER17766.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 240
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL W T D+ D R G +D+ +G+S+GF TV EES + +E
Sbjct: 163 IYVGNLPWRTAWQDLKDLFRECGEVIRVDIA---EGWDGRSRGFATVLFEDEESTTKAIE 219
Query: 133 RLPTLELHGRKPMV 146
+ + GRK +V
Sbjct: 220 KYNEYDFEGRKLLV 233
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
S C +YVGNL W TTE ++ D ++ +G +D+ ++G+SKG V
Sbjct: 2 ASQEKC-VYVGNLDWTTTEDELGDHMKKVGPVVSVDIM---TRNDGKSKGCGIVEFKEAS 57
Query: 126 SMSLVMERLPTLELHGRKPMV 146
S++ ++ L +L RK V
Sbjct: 58 SVAKAIDTLNETQLGERKIFV 78
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S S L+VG +++ T + + ++ G + IDVK + G+S+GF VT + E
Sbjct: 36 SMSSAKLFVGGISYSTDDMSLRESFARYG--EVIDVKVIMDRETGRSRGFGFVTFATSED 93
Query: 127 MSLVMERLPTLELHGRKPMVAYPT 150
S ++ + +LHGR+ V Y T
Sbjct: 94 ASSAIQGMDGQDLHGRRIRVNYAT 117
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S S L+VG +++ T + + ++ G + IDVK + G+S+GF VT + E
Sbjct: 36 SMSSAKLFVGGISYSTDDMSLRESFARYG--EVIDVKVIMDRETGRSRGFGFVTFATSED 93
Query: 127 MSLVMERLPTLELHGRKPMVAYPT 150
S ++ + +LHGR+ V Y T
Sbjct: 94 ASSAIQGMDGQDLHGRRIRVNYAT 117
>gi|116793682|gb|ABK26841.1| unknown [Picea sitchensis]
Length = 347
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 42 FPE----HTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVP 97
FPE GRSPAR + S H +YVGNL W T + +A+ G
Sbjct: 234 FPEVPRLQNGRSPARS-----PSNFGGFVDSPH-KVYVGNLAWSVTSETLREALNGKG-- 285
Query: 98 DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGR 142
+ + K ++ G+S+GF V+ SE + + + LE+ GR
Sbjct: 286 NVLGAKVIQDRETGRSRGFGFVSFSSEAEVEAAVSEMDGLEVEGR 330
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVGNL + ++ GV + ++V + + S+G+S+GF VT+ + E +
Sbjct: 160 KLYVGNLPFDIDSEGLAKMFDESGVVEMVEVIY--DRSSGRSRGFAFVTMSTVEEAEAAI 217
Query: 132 ERLPTLELHGRKPMVAYP 149
++ E+ GR V +P
Sbjct: 218 KKFNGFEIDGRSLRVNFP 235
>gi|365122662|ref|ZP_09339562.1| hypothetical protein HMPREF1033_02908 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642168|gb|EHL81535.1| hypothetical protein HMPREF1033_02908 [Tannerella sp.
6_1_58FAA_CT1]
Length = 81
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+Y+GNL + EAD+ I G + VK ++ G+SKGF + + ++ +
Sbjct: 2 NIYIGNLNYRVKEADLQQVIEEYGAVE--SVKIIKDRETGKSKGFAFIEMNNDAQAKQAI 59
Query: 132 ERLPTLELHGRKPMV 146
E L E GR +V
Sbjct: 60 EELNGSEFEGRTMIV 74
>gi|389646767|ref|XP_003721015.1| RRM domain-containing protein [Magnaporthe oryzae 70-15]
gi|86196444|gb|EAQ71082.1| hypothetical protein MGCH7_ch7g489 [Magnaporthe oryzae 70-15]
gi|351638407|gb|EHA46272.1| RRM domain-containing protein [Magnaporthe oryzae 70-15]
gi|440466941|gb|ELQ36182.1| RRM domain-containing protein [Magnaporthe oryzae Y34]
gi|440488100|gb|ELQ67844.1| RRM domain-containing protein [Magnaporthe oryzae P131]
Length = 424
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+ + L WW T+ D+ IR G + + D+ F E+ NG+SKG + L S+++ + V
Sbjct: 99 ILISELQWWITDDDIRGWIREAGCEEELKDITFSEHKVNGKSKGQVYIELTSQQAATAVK 158
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRS 165
RL + G A + V+Y NP R+
Sbjct: 159 HRLESSGEDG--ASQAGRKQQVIYSSPTMNPFRT 190
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L+VG L++ T E + DA G + ID K + G+S+GF +T +EE S
Sbjct: 29 SSSKLFVGGLSYTTDEGSLRDAFSHYG--EIIDAKIIVDRDTGRSRGFGFITYAAEEQAS 86
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
+ L +LHGR V+ T
Sbjct: 87 SAIMALDGKDLHGRNLRVSAAT 108
>gi|443898362|dbj|GAC75697.1| mRNA cleavage factor I subunit [Pseudozyma antarctica T-34]
Length = 395
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSE 124
+Y+G+L WW+T+ ++ S+GVP D+ F E+ NG+SKG V SE
Sbjct: 139 VYIGDLNWWSTDEEIRQIAASVGVPLSLNDITFSEHKVNGKSKGVAYVETDSE 191
>gi|168036414|ref|XP_001770702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678063|gb|EDQ64526.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+VG L+W TT+ + + R G + ++ K + G S+GF V G E SM +E
Sbjct: 9 CFVGGLSWNTTDKGLEEEFRHFG--NVLEAKVIVDKETGHSRGFGFVNFGDERSMEEAIE 66
Query: 133 RLPTLELHGR 142
RL EL GR
Sbjct: 67 RLHGKELDGR 76
>gi|443920482|gb|ELU40392.1| hypothetical protein AG1IA_05582 [Rhizoctonia solani AG-1 IA]
Length = 457
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGV-PDFIDVKFFENASNGQSKGFCTVTL 121
LY+G L WWTT+ D+ A +IGV + D+ F E+ NG+SKG TL
Sbjct: 97 LYIGELQWWTTDEDVRQAAHNIGVMIEHKDITFSEHKVNGKSKGLAANTL 146
>gi|449543127|gb|EMD34104.1| hypothetical protein CERSUDRAFT_86854 [Ceriporiopsis subvermispora
B]
Length = 339
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTL-GSEESMSL 129
LY+G+L WWTT+ D+ ++GV D D+ F E+ NG+SKG + G E +M++
Sbjct: 118 LYIGDLQWWTTDEDLRQVALNVGVNLDHKDITFSEHKVNGKSKGIAYIECHGHENAMTM 176
>gi|83643344|ref|YP_431779.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631387|gb|ABC27354.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 92
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+YVGNL++ TE D+ +A + G D +V + GQSKGF V +
Sbjct: 1 MNIYVGNLSYQVTEDDLREAFAAYG--DISNVNIIRDRDTGQSKGFGFVEMSDNGQAEEA 58
Query: 131 MERLPTLELHGR-------KPMVAYPTRN 152
+++L L GR +P P RN
Sbjct: 59 IQKLNESNLKGRNMKVNEARPREEKPKRN 87
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S S L+VG L+W T E + +A G + I+ + + G+S+GF V+ S E
Sbjct: 36 SMSSSKLFVGGLSWGTDETSLKEAFSQHG--EVIEARVIMDRDTGRSRGFGFVSFTSTEE 93
Query: 127 MSLVMERLPTLELHGRKPMVAYPTRNV 153
+ + L +LHGR+ V Y T +
Sbjct: 94 AASALTALDGQDLHGRQIRVNYATEKL 120
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S S L+VG +++ T + + ++ G + IDVK + G+S+GF +T + E
Sbjct: 36 SMSSAKLFVGGISYSTDDMSLRESFARYG--EVIDVKVIMDRETGRSRGFGFITFATSED 93
Query: 127 MSLVMERLPTLELHGRKPMVAYPT 150
S ++ + +LHGR+ V Y T
Sbjct: 94 ASSAIQGMDGQDLHGRRIRVNYAT 117
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora indica
DSM 11827]
Length = 236
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
+YVGNL+W TT+ + +A R G + +D + G+S+GF VT SEE S
Sbjct: 3 AKIYVGNLSWNTTDDTLREAFRQYG--NVVDSIVMRDRETGRSRGFGFVTYSSEEEASNA 60
Query: 131 MERLPTLELHGRKPMV 146
+ L L GR+ V
Sbjct: 61 ISGLNETSLDGRQIKV 76
>gi|168008942|ref|XP_001757165.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691663|gb|EDQ78024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 161
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+VG L+W TT+ + + R G + ++ K + G S+GF V G E SM +E
Sbjct: 9 CFVGGLSWNTTDKGLEEEFRRFG--NVLEAKVIVDKETGHSRGFGFVNFGDERSMDEAIE 66
Query: 133 RLPTLELHGR 142
RL EL GR
Sbjct: 67 RLHGKELDGR 76
>gi|71000447|ref|XP_754917.1| RRM domain protein [Aspergillus fumigatus Af293]
gi|66852554|gb|EAL92879.1| RRM domain protein [Aspergillus fumigatus Af293]
gi|159127930|gb|EDP53045.1| RRM domain protein [Aspergillus fumigatus A1163]
Length = 396
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 67/160 (41%), Gaps = 15/160 (9%)
Query: 15 DTNTSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLY 74
D+ + GEHV+ H + + P P+ + R H + + L
Sbjct: 65 DSTGTNGEHVTQAHA-VQQQEASQAAPAPQQGVK--------RKEHDDRPSDPDATTALL 115
Query: 75 VGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTV---TLGSEESMSLV 130
+ +L WWTT+ D+ I + G D + DV F E+ NG+SKG V TL + +
Sbjct: 116 ISDLYWWTTDDDIRGWINAAGCEDELKDVTFSEHKVNGKSKGQAFVEFTTLQAATAAKHQ 175
Query: 131 MERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSR 168
+E L GRK MV Y P N P+R ++
Sbjct: 176 IENLNVSSQGGRKYMVHYTNPHTNPFRTLPKDAPMRKDNQ 215
>gi|66362402|ref|XP_628165.1| Gbp1/Gbp2p-like single stranded G-strand telomeric DNA-binding
protein [Cryptosporidium parvum Iowa
gi|67605728|ref|XP_666700.1| single-stranded G-strand telomeric DNA-binding protein
[Cryptosporidium hominis TU502]
gi|28395327|gb|AAO39067.1| putative single stranded G-strand telomeric DNA-binding protein
[Cryptosporidium parvum]
gi|46227370|gb|EAK88305.1| Gbp1/Gbp2p-like, putative single stranded G-strand telomeric
DNA-binding protein [Cryptosporidium parvum Iowa II]
gi|54657743|gb|EAL36470.1| single-stranded G-strand telomeric DNA-binding protein
[Cryptosporidium hominis]
gi|323508647|dbj|BAJ77217.1| cgd1_3530 [Cryptosporidium parvum]
Length = 198
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++V NL W TT+ D++ A IG + +V +FE +G+S+G T+ L +E
Sbjct: 124 VFVTNLAWKTTQEDLAKAFNEIGPLESCEVFYFE---DGRSRGIATIVFTDPNHAQLAVE 180
Query: 133 RLPTLELHGRKPMV 146
+L E+ GR+ +V
Sbjct: 181 KLNDREIDGREILV 194
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S S L+VG L++ T E+ + +A G D I+ + + G+S+GF ++ S E
Sbjct: 36 SMSSSKLFVGGLSYGTDESSLKEAFSQYG--DVIEARVIMDRDTGRSRGFGFISFPSSEE 93
Query: 127 MSLVMERLPTLELHGRKPMVAYPT 150
+ ++ + +LHGR+ V Y T
Sbjct: 94 AASALQAMDGQDLHGRRIRVNYAT 117
>gi|149392545|gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 205
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 31 IDLYDDVTLQ--PFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMS 88
I+ ++ T Q P ++G P R S + S LYVGNL W + +
Sbjct: 79 IEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLE 138
Query: 89 DAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMV 146
+ G +D K + +G+S+GF VT GS E ++ + L ++L GR+ V
Sbjct: 139 NLFSEQGT--VLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRV 194
>gi|261855638|ref|YP_003262921.1| RNP-1 like RNA-binding protein [Halothiobacillus neapolitanus c2]
gi|261836107|gb|ACX95874.1| RNP-1 like RNA-binding protein [Halothiobacillus neapolitanus c2]
Length = 98
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+YVGNL++ + +AD+ A + G + K ++ + G+SKGF V + + +
Sbjct: 2 INIYVGNLSYQSGDADVRSAFEAFG--EVKSAKVIQDMATGRSKGFAFVEMADKAAGMTA 59
Query: 131 MERLPTLELHGRKPMV 146
+E+L +L+GR V
Sbjct: 60 IEQLDNTDLNGRNIRV 75
>gi|326512286|dbj|BAJ96124.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 48 RSPARYRHHRYSHHHSQATSSSHC-NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
R A + + + S C + YVGNL+W +E D+ D +S + ++F
Sbjct: 133 RITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFKSSRIA---SIRFAI 189
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRN 152
+ G S+GFC V +ES+ + + EL GR +AY N
Sbjct: 190 DKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYAIIN 234
>gi|355566431|gb|EHH22810.1| Cleavage and polyadenylation specificity factor 59 kDa subunit
[Macaca mulatta]
gi|355752050|gb|EHH56170.1| Cleavage and polyadenylation specificity factor 59 kDa subunit
[Macaca fascicularis]
Length = 473
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 79/191 (41%), Gaps = 36/191 (18%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +WW AI + + + + FE
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWVV---AFSAILLLPLTLGLYLSVFE 114
Query: 107 ---NASNGQSK--GFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQN 161
+ S QS + V + SE S+ ++E LP L+G K V TR L QFEAQ
Sbjct: 115 LMTSQSKWQSNFLRYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ- 173
Query: 162 PLRSRSRRSYR 172
+R R R
Sbjct: 174 ---ARKRECVR 181
>gi|296081401|emb|CBI16834.3| unnamed protein product [Vitis vinifera]
Length = 491
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
L+VG L WWTT+A++ + G ++KFF+ ++G+SKG+C V
Sbjct: 213 LFVGELHWWTTDAELESVLSQYG--RVKEIKFFDERASGKSKGYCQVEF 259
>gi|261351264|gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
Length = 202
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++GNL+W T++ + DA G + +D K + +G+S+GF VT + +M +E
Sbjct: 9 CFIGNLSWSTSDRGLKDAFEKFG--NLVDAKVVLDKFSGRSRGFGFVTFDDKRAMEDAIE 66
Query: 133 RLPTLELHGRKPMV 146
+ ++L GR V
Sbjct: 67 AMNGMDLDGRAITV 80
>gi|71020371|ref|XP_760416.1| hypothetical protein UM04269.1 [Ustilago maydis 521]
gi|46100085|gb|EAK85318.1| hypothetical protein UM04269.1 [Ustilago maydis 521]
Length = 374
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Query: 28 HDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADM 87
H D L +L P +T P R + + +Y+G+L WW+T+ ++
Sbjct: 73 HQDEPLSAGPSLPAIPNNTAAPPVRSTMSTLAGRPKVTDPNIQNAVYIGDLNWWSTDEEI 132
Query: 88 SDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMV 146
S+GV D+ F E+ NG+SKG V SE + + H ++ V
Sbjct: 133 RQIASSVGVTLSLNDITFSEHKVNGKSKGVAYVETESEADARKIKTWFEENDFHFKRANV 192
Query: 147 AYPT 150
T
Sbjct: 193 TLTT 196
>gi|388853710|emb|CCF52678.1| related to HRB1-Poly(A+) RNA-binding protein, involved in the
export of mRNAs from the nucleus to the cytoplasm
[Ustilago hordei]
Length = 514
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 50 PARYRHHR-----YSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKF 104
PAR H R ++ H + S +C +YVGNL++ + D +R G F +V
Sbjct: 53 PARNFHDRAVASQHAAHEASRKSQKNCRVYVGNLSYGVKWNTLKDFMREAGNVVFSEVLT 112
Query: 105 FENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMV 146
NG SKG V S E + +L EL GR+ V
Sbjct: 113 L---PNGSSKGCGIVEYSSSEEAQKAISQLTNKELEGRQVFV 151
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L++G L W T E + DA S G +VK + G+S+GF V S E
Sbjct: 43 SSSKLFIGGLAWATDENTLRDAFSSFGT--VTEVKIILDRDTGRSRGFGFVNFTSPEEAE 100
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
+ ++ + EL GR+ V Y T
Sbjct: 101 VALQEMDGRELAGRQIRVDYAT 122
>gi|168033890|ref|XP_001769447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679367|gb|EDQ65816.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL W A +++ G D ++V + + +G+S+GF VT+ + E V+
Sbjct: 46 LYVGNLPWTCDSAQLAEICSDHGTVDVVEVIY--DKISGRSRGFAFVTMATPEDAQAVIN 103
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRR 169
L ++ GR V YP Q + P RS R
Sbjct: 104 ALDGTDMGGRPLKVNYP------QSQKDKPRVERSER 134
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VGNL+W EA + G +D K + +G+S+GF VT+ S + + +E
Sbjct: 142 LFVGNLSWGCDEAALYSFFSEYGT--VVDAKVVFDRDSGRSRGFGFVTMESAAAANAAIE 199
Query: 133 RLPTLELHGRKPMV 146
L EL GR+ V
Sbjct: 200 NLDGAELDGRRLRV 213
>gi|225156280|ref|ZP_03724758.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
gi|224803012|gb|EEG21257.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
Length = 106
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+ LYVGNL++ T+EAD+ A + G DV + G+ +GF VT + E L
Sbjct: 2 NSKLYVGNLSFNTSEADLRTAFSTCGT--LTDVFLATDRETGRPRGFAFVTFDTAEESQL 59
Query: 130 VMERLPTLELHGRKPMV 146
E+L +L GR V
Sbjct: 60 ATEKLNGTDLGGRAITV 76
>gi|296083731|emb|CBI23720.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A S + LY GNL + A ++ I++ G P+ ++V + N G+S+GF VT+ S
Sbjct: 105 AESPVNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLY--NRDTGRSRGFAFVTMSSV 162
Query: 125 ESMSLVMERLPTLELHGRKPMVAY 148
E + V+E L E GR V +
Sbjct: 163 EDCNAVIENLDGSEYGGRTLRVNF 186
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VGNL+W T ++ + G + I + + G+S+G+ V ++ M +
Sbjct: 203 KLFVGNLSWSVTSESLNQVFQEYG--NVIGARVLYDGETGRSRGYGFVCYSTKAEMDTAL 260
Query: 132 ERLPTLELHGR 142
E L +EL GR
Sbjct: 261 ESLNGVELEGR 271
>gi|338706322|ref|YP_004673090.1| putative RNA-binding protein [Treponema paraluiscuniculi Cuniculi
A]
gi|378972859|ref|YP_005221463.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|378973926|ref|YP_005222532.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|378974988|ref|YP_005223596.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
DAL-1]
gi|378981835|ref|YP_005230140.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. CDC2]
gi|384421880|ref|YP_005631239.1| glycine-rich RNA-binding protein 2 [Treponema pallidum subsp.
pallidum str. Chicago]
gi|291059746|gb|ADD72481.1| glycine-rich RNA-binding protein 2 [Treponema pallidum subsp.
pallidum str. Chicago]
gi|335344383|gb|AEH40299.1| probable RNA-binding protein [Treponema paraluiscuniculi Cuniculi
A]
gi|374677182|gb|AEZ57475.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|374678252|gb|AEZ58544.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. CDC2]
gi|374679321|gb|AEZ59612.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|374680386|gb|AEZ60676.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
DAL-1]
Length = 89
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
+YVGNL + TTEA ++ G + + V ++ +SKGF V + S ES LV
Sbjct: 3 AKIYVGNLNYATTEAGLASLFSQFG--EVLSVAVIKDKLTQRSKGFGFVEMESAESAELV 60
Query: 131 MERLPTLELHGRKPMVAYP 149
+ L E GR+ V Y
Sbjct: 61 INELNEKEFEGRRLRVNYA 79
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++GNL+W TT+ + DA G + + K + +G+S+GF VT +++M +E
Sbjct: 9 CFIGNLSWSTTDESLKDAFSKFG--NLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIE 66
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRS 167
+ L+L GR V + + Q P R R+
Sbjct: 67 GMNGLDLDGRNITVD--------KAQPQGPGRDRN 93
>gi|258573489|ref|XP_002540926.1| predicted protein [Uncinocarpus reesii 1704]
gi|237901192|gb|EEP75593.1| predicted protein [Uncinocarpus reesii 1704]
Length = 393
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LY+ +L WWTT+ ++ + D + DV F E+ NG+SKG V S ++ +
Sbjct: 112 LYISDLYWWTTDDEIRGWVNEASCEDELKDVTFSEHKVNGKSKGQAFVEFRSPQAATAAK 171
Query: 132 ERLPTL---ELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSRRS 170
++ +L + + RK V Y P N NP+R + RS
Sbjct: 172 RKIESLNSNQQNARKYSVNYTQPHANPFRTLPKDNPMRGKDDRS 215
>gi|297837519|ref|XP_002886641.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
gi|297332482|gb|EFH62900.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
Length = 252
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VGNL+W T +++A R G D + + + G+S+G+ V S+ M +E
Sbjct: 173 LFVGNLSWTVTSESLAEAFRECG--DVVGARVVYDGDTGRSRGYGFVCYSSKAEMETALE 230
Query: 133 RLPTLELHGR 142
L EL GR
Sbjct: 231 SLDGFELEGR 240
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
++ + LY GNL + A ++ I+ P+ ++V + N GQS+GF VT+ + E
Sbjct: 75 AAINTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLY--NRDTGQSRGFAFVTMSNVED 132
Query: 127 MSLVMERLPTLELHGRKPMVAY-----PTRNVLY 155
+++++ L E GR V + P + LY
Sbjct: 133 CNIIIDNLDGTEYLGRALKVNFADKPKPNKEPLY 166
>gi|357137588|ref|XP_003570382.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 305
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VGNL+W T ++DA + G D + + + G+S+G+ V ++E M +
Sbjct: 225 KLFVGNLSWTVTPEMLTDAFQQCG--DVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAI 282
Query: 132 ERLPTLELHGRKPMV 146
E L E+ GR+ V
Sbjct: 283 ETLNGTEIEGREIRV 297
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
SS LY GNL + A ++ ++ P+ ++V + + + G+S+GF VT+ + E
Sbjct: 130 SSATKLYFGNLPYNCDSALLAGIVQDHATPEMVEVLY--DRTTGRSRGFAFVTMSTLEDC 187
Query: 128 SLVMERLPTLELHGR 142
V++ L GR
Sbjct: 188 ERVIKNLDGTLYSGR 202
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S S L++G +++ T E + +A G D +D K + G+S+GF +T + E
Sbjct: 36 SMSSAKLFIGGVSYSTDETGLREAFSRYG--DVLDAKIIMDRDTGRSRGFGFITFATSEE 93
Query: 127 MSLVMERLPTLELHGRKPMVAYPT 150
S ++ + EL GR V Y T
Sbjct: 94 ASSALQAMDNKELDGRTVRVNYAT 117
>gi|15639347|ref|NP_218796.1| RNA-binding protein, [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025589|ref|YP_001933361.1| RNA-binding protein [Treponema pallidum subsp. pallidum SS14]
gi|408502236|ref|YP_006869680.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
str. Mexico A]
gi|3322634|gb|AAC65342.1| RNA-binding protein, putative [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018164|gb|ACD70782.1| possible RNA-binding protein [Treponema pallidum subsp. pallidum
SS14]
gi|408475599|gb|AFU66364.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
str. Mexico A]
Length = 105
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
+YVGNL + TTEA ++ G + + V ++ +SKGF V + S ES LV
Sbjct: 19 AKIYVGNLNYATTEAGLASLFSQFG--EVLSVAVIKDKLTQRSKGFGFVEMESAESAELV 76
Query: 131 MERLPTLELHGRKPMVAY 148
+ L E GR+ V Y
Sbjct: 77 INELNEKEFEGRRLRVNY 94
>gi|421976742|gb|AFX73254.1| glycine rich RNA binding protein 1a [Solanum lycopersicum]
Length = 164
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ +SDA + G + +D K + G+S+GF VT E+SM +
Sbjct: 10 FVGGLAWATTDRTLSDAFSTYG--EVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAISG 67
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 68 MNGQELDGRNITV 80
>gi|1934994|emb|CAA73034.1| SGRP-1 [Solanum commersonii]
Length = 162
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ +SDA + G + +D K + G+S+GF VT E+SM +
Sbjct: 10 FVGGLAWATTDRTLSDAFSTYG--EVVDSKIINDRETGRSRGFGFVTFKDEKSMKEAISG 67
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 68 MNGSELDGRNITV 80
>gi|424513641|emb|CCO66263.1| predicted protein [Bathycoccus prasinos]
Length = 339
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YV NLTWWT++ + G+ I +FF NG+SKG V S +S L E
Sbjct: 89 VYVANLTWWTSDKQIEQLASEFGITKSI--QFFTEKKNGKSKGCAIVEFTSSQSALLCAE 146
Query: 133 RLPTLELHGRKPMV 146
L + G+ +V
Sbjct: 147 NLNKRAIDGKACVV 160
>gi|156367093|ref|XP_001627254.1| predicted protein [Nematostella vectensis]
gi|156214158|gb|EDO35154.1| predicted protein [Nematostella vectensis]
Length = 139
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
C Y+GNL + EAD+ D D +DV+ + + +GF VT GS+++M
Sbjct: 4 ECKCYIGNLDFKVNEADLQDRFSRY---DVVDVQVISDRETQRPRGFAFVTFGSKKNMED 60
Query: 130 VMERLPTLELHGRKPMV 146
+ L E GR V
Sbjct: 61 AINELDGQEFDGRSMKV 77
>gi|255563618|ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 134
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L++G L++ T + + DA G D + + + G+S+GF V S +S S
Sbjct: 34 SSSKLFIGGLSYGTNDDSLKDAFSGFG--DVVTARVITDRDTGRSRGFGFVDFSSVDSAS 91
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
+ + ELHGR V+Y T
Sbjct: 92 SALSAMDGQELHGRNIRVSYAT 113
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+VGNL+W TT+ + DA G + K + +G+S+GF VT +++M +E
Sbjct: 9 CFVGNLSWSTTDESLKDAFSKYGK--VTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIE 66
Query: 133 RLPTLELHGRKPMV 146
+ L+L GR V
Sbjct: 67 DMNGLDLEGRAITV 80
>gi|399931801|gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goodspeedii]
Length = 144
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T + + DA+ + G D +D + + +G+S+GF V +ES + ++
Sbjct: 40 LFVGGLSWGTDDQSLRDALATFG--DVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 133 RLPTLELHGRKPMV 146
+ EL GR V
Sbjct: 98 AMDGQELQGRNIRV 111
>gi|170098751|ref|XP_001880594.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644119|gb|EDR08369.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 367
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTV 119
LY+G+L WWTT+ D+ S+G+ D D+ F E+ NG+SKG +
Sbjct: 101 LYIGDLQWWTTDEDLRQVALSVGLTIDHKDITFSEHKVNGKSKGIAYI 148
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L++G L++ T + + +A G + I+ + + G+S+GF VT S E S
Sbjct: 38 SSSKLFIGGLSYSTDDTSLREAFHKYG--EVIEARVIVDRETGRSRGFGFVTFTSSEEAS 95
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
++ L +LHGR+ V Y T
Sbjct: 96 SAIQALDGQDLHGRRVRVNYAT 117
>gi|1395193|dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
gi|1435062|dbj|BAA06012.1| RNA binding protein RZ-1 [Nicotiana sylvestris]
Length = 209
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++GNL+W T++ + DA G + +D K + +G+S+GF VT + +M +E
Sbjct: 8 CFIGNLSWSTSDRGLKDAFEKFG--NLVDAKVVLDKFSGRSRGFGFVTFDEKRAMEDAIE 65
Query: 133 RLPTLELHGRKPMV 146
+ ++L GR V
Sbjct: 66 AMNGVDLDGRDITV 79
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++VGNL+W T ++DA G + +D ++ G+S+GF VT S ES S ++
Sbjct: 13 VFVGNLSWGTDNNSLADAFSQFG--EVVDSIVLKDRETGRSRGFGFVTFSSPESASAAVD 70
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQ 160
+ +L+GR V Y AQ
Sbjct: 71 AMNGQDLNGRNIRVNLANERPAYGGGAQ 98
>gi|408393961|gb|EKJ73218.1| hypothetical protein FPSE_06642 [Fusarium pseudograminearum CS3096]
Length = 112
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNL+W TT+ + +A + G+ ID + G+S+GF VT GS E +
Sbjct: 5 LYIGNLSWNTTDDTLRNACQEFGM--IIDSIVMRDRDTGRSRGFGFVTFGSVEEAENAVN 62
Query: 133 RLPTLELHGRKPMV 146
L EL GR+ V
Sbjct: 63 GLNEQELDGRRIKV 76
>gi|356531425|ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYV NL+W T AD++D G DV+ ++ +G+SKG+ VT+ S E +
Sbjct: 74 KLYVVNLSWSLTAADITDLFAQCGT--VTDVEIIKS-KDGRSKGYAFVTMASGEEAQAAV 130
Query: 132 ERLPTLELHGRKPMVAYPTR 151
++ + EL GR V R
Sbjct: 131 DKFDSYELSGRIIRVELAKR 150
>gi|443921112|gb|ELU40879.1| splicing factor, CC1-like family protein [Rhizoctonia solani AG-1
IA]
Length = 399
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVG+L + TE+D+ G DF+D + + G+SKG+C + E + +
Sbjct: 171 QLYVGSLHFNLTESDIRQVFEPFGELDFVD--LHRDPATGKSKGYCFIQYKRPEDARMAL 228
Query: 132 ERLPTLELHGRKPMV 146
E++ EL GR+ V
Sbjct: 229 EQMEGFELAGRQLRV 243
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T + + +A S G D +D K + +G+S+GF V E+ M
Sbjct: 41 LFVGGLSWGTDDQSLKEAFTSFG--DVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAMN 98
Query: 133 RLPTLELHGRKPMV 146
+ +LHGR V
Sbjct: 99 AMDGQQLHGRNIRV 112
>gi|298528813|ref|ZP_07016217.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298512465|gb|EFI36367.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
NLYVGNL+W TTE + D+ G + K E+ G+S+GF V + E
Sbjct: 2 TNLYVGNLSWNTTETQLRDSFAEFG--EVSSAKIIEDRETGRSRGFGFVEM--ENGADEA 57
Query: 131 MERLPTLELHGR--KPMVAYPTR 151
+E+L + GR K VA P R
Sbjct: 58 VEKLNGKDFDGRTIKVNVAKPKR 80
>gi|150003039|ref|YP_001297783.1| RNA-binding protein rbpA [Bacteroides vulgatus ATCC 8482]
gi|212690527|ref|ZP_03298655.1| hypothetical protein BACDOR_00009 [Bacteroides dorei DSM 17855]
gi|237708016|ref|ZP_04538497.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265754197|ref|ZP_06089386.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|294775663|ref|ZP_06741171.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|319642186|ref|ZP_07996846.1| RNA-binding protein [Bacteroides sp. 3_1_40A]
gi|345515924|ref|ZP_08795421.1| hypothetical protein BSEG_02772 [Bacteroides dorei 5_1_36/D4]
gi|345518203|ref|ZP_08797658.1| hypothetical protein BSFG_02926 [Bacteroides sp. 4_3_47FAA]
gi|423229914|ref|ZP_17216319.1| hypothetical protein HMPREF1063_02139 [Bacteroides dorei
CL02T00C15]
gi|423241567|ref|ZP_17222679.1| hypothetical protein HMPREF1065_03302 [Bacteroides dorei
CL03T12C01]
gi|423247004|ref|ZP_17228055.1| hypothetical protein HMPREF1064_04261 [Bacteroides dorei
CL02T12C06]
gi|423314856|ref|ZP_17292788.1| hypothetical protein HMPREF1058_03400 [Bacteroides vulgatus
CL09T03C04]
gi|149931463|gb|ABR38161.1| putative RNA-binding protein rbpA [Bacteroides vulgatus ATCC 8482]
gi|212666876|gb|EEB27448.1| hypothetical protein BACDOR_00009 [Bacteroides dorei DSM 17855]
gi|229436554|gb|EEO46631.1| hypothetical protein BSEG_02772 [Bacteroides dorei 5_1_36/D4]
gi|229458002|gb|EEO63723.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|254836470|gb|EET16779.1| hypothetical protein BSFG_02926 [Bacteroides sp. 4_3_47FAA]
gi|263234906|gb|EEZ20461.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|294450507|gb|EFG18999.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|317386172|gb|EFV67091.1| RNA-binding protein [Bacteroides sp. 3_1_40A]
gi|392632705|gb|EIY26663.1| hypothetical protein HMPREF1063_02139 [Bacteroides dorei
CL02T00C15]
gi|392633765|gb|EIY27703.1| hypothetical protein HMPREF1064_04261 [Bacteroides dorei
CL02T12C06]
gi|392641153|gb|EIY34938.1| hypothetical protein HMPREF1065_03302 [Bacteroides dorei
CL03T12C01]
gi|392681038|gb|EIY74400.1| hypothetical protein HMPREF1058_03400 [Bacteroides vulgatus
CL09T03C04]
Length = 81
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+YVGNL + E D+ A+ + GV VK ++ G+SKGF V + ++ + M
Sbjct: 2 NMYVGNLNYRVKEGDLEQAMAAYGV--VTSVKVIKDRETGKSKGFAFVEMENDAEAAQAM 59
Query: 132 ERLPTLELHGRKPMV 146
L E GR+ ++
Sbjct: 60 NELNGSEFMGRQLVI 74
>gi|326515712|dbj|BAK07102.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 104
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + +A G D ID K + G+S+GF VT S+E+M +E
Sbjct: 9 FVGGLAWATDDQSLQNAFSKYG--DVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 67 MNGQDLDGRNITV 79
>gi|330791951|ref|XP_003284054.1| hypothetical protein DICPUDRAFT_12561 [Dictyostelium purpureum]
gi|325085983|gb|EGC39380.1| hypothetical protein DICPUDRAFT_12561 [Dictyostelium purpureum]
Length = 89
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+ L WWT + ++ G + +K FEN +NG+SKG+ + +++S
Sbjct: 20 LYISGLEWWTKDQELEKIFSEFG--KIVTLKIFENENNGKSKGYAFIEFQNQDSAQQAKS 77
Query: 133 RLPTLELHGR 142
+L ++G+
Sbjct: 78 KLDRKSINGK 87
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L++G L++ T + + +A G + I+ + + G+S+GF VT S E S
Sbjct: 38 SSSKLFIGGLSYSTDDTSLREAFHKYG--EVIEARVIVDRETGRSRGFGFVTFTSSEEAS 95
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
++ L +LHGR+ V Y T
Sbjct: 96 SAIQALDGQDLHGRRVRVNYAT 117
>gi|125559266|gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indica Group]
Length = 259
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 31 IDLYDDVTLQ--PFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMS 88
++ ++ T Q P ++G P R S + S LYVGNL W + +
Sbjct: 133 VEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLE 192
Query: 89 DAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRK 143
+ G +D K + +G+S+GF VT GS E ++ + L ++L GR+
Sbjct: 193 NLFSEQGT--VLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQ 245
>gi|115473531|ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|22296371|dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A, chloroplast precursor [Oryza
sativa Japonica Group]
gi|113611900|dbj|BAF22278.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|125601192|gb|EAZ40768.1| hypothetical protein OsJ_25244 [Oryza sativa Japonica Group]
Length = 264
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 31 IDLYDDVTLQ--PFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMS 88
++ ++ T Q P ++G P R S + S LYVGNL W + +
Sbjct: 138 VEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLE 197
Query: 89 DAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRK 143
+ G +D K + +G+S+GF VT GS E ++ + L ++L GR+
Sbjct: 198 NLFSEQGT--VLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQ 250
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++GNL+W TT+ + DA G + + K + +G+S+GF VT +++M +E
Sbjct: 9 CFIGNLSWSTTDESLKDAFSKFG--NLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIE 66
Query: 133 RLPTLELHGRKPMV 146
+ L+L GR V
Sbjct: 67 GMNGLDLDGRNITV 80
>gi|259482354|tpe|CBF76757.1| TPA: RRM domain protein (AFU_orthologue; AFUA_3G06890) [Aspergillus
nidulans FGSC A4]
Length = 391
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLV- 130
L + L WWTT+ D+ R G D + DV F E+ NG+SKG + S + +
Sbjct: 111 LLISELHWWTTDDDIRGWTREAGCEDELKDVTFSEHKVNGKSKGQAFLEFTSLPAATATK 170
Query: 131 --MERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSRRS 170
++ L T GRK +V Y P N NP+R + R+
Sbjct: 171 HHIDSLSTTGQSGRKFLVNYTSPIPNPFRTLPKDNPMRKDNART 214
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++GNL+W TT+ + DA G + + K + +G+S+GF VT +++M +E
Sbjct: 9 CFIGNLSWSTTDESLKDAFGKFG--NLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIE 66
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRS 167
+ L+L GR V + + Q P R R+
Sbjct: 67 GMNGLDLDGRAITVD--------KAQPQGPGRDRN 93
>gi|353238006|emb|CCA69965.1| related to splicing factor HCC1 [Piriformospora indica DSM 11827]
Length = 543
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
ATS LYVG+L + TE ++ G +F+D + + G+SKG+C +
Sbjct: 299 ATSHGPMQLYVGSLHFQLTEEEIKQVFEPFGELEFVD--LHRDPATGRSKGYCFIQYRRP 356
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
E + +E++ EL GR+ V
Sbjct: 357 EDAKMALEQMDGFELAGRQLRV 378
>gi|67537258|ref|XP_662403.1| hypothetical protein AN4799.2 [Aspergillus nidulans FGSC A4]
gi|40741179|gb|EAA60369.1| hypothetical protein AN4799.2 [Aspergillus nidulans FGSC A4]
Length = 375
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLV- 130
L + L WWTT+ D+ R G D + DV F E+ NG+SKG + S + +
Sbjct: 111 LLISELHWWTTDDDIRGWTREAGCEDELKDVTFSEHKVNGKSKGQAFLEFTSLPAATATK 170
Query: 131 --MERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSRRS 170
++ L T GRK +V Y P N NP+R + R+
Sbjct: 171 HHIDSLSTTGQSGRKFLVNYTSPIPNPFRTLPKDNPMRKDNART 214
>gi|312282683|dbj|BAJ34207.1| unnamed protein product [Thellungiella halophila]
Length = 166
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T +AD+ G + ID K + G+S+GF VT E+SM +E
Sbjct: 10 FVGGLAWATADADLERTFSQFG--EVIDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEE 67
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 68 MNGKELDGRSITV 80
>gi|409048273|gb|EKM57751.1| hypothetical protein PHACADRAFT_251579 [Phanerochaete carnosa
HHB-10118-sp]
Length = 386
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LY+G+L WWTT+ D+ + V D D+ F E+ NG+SKG V E+ + +
Sbjct: 113 LYIGDLQWWTTDEDLRQVAAKLNVNLDHKDITFSEHKVNGKSKGIAYVECRGHENATTLK 172
Query: 132 ERLPTLELHGRKPMVAY 148
+ RK ++
Sbjct: 173 NWFDNNDFQNRKASASF 189
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T + + DA + G D +D + + +G+S+GF V +ES + ++
Sbjct: 40 LFVGGLSWGTDDQSLRDAFATFG--DVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 133 RLPTLELHGRKPMVAYP 149
+ EL GR V+
Sbjct: 98 AMDGQELQGRNIRVSIA 114
>gi|399931811|gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T + + DA + G D +D + + +G+S+GF V +ES + ++
Sbjct: 40 LFVGGLSWGTDDQSLRDAFATFG--DVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 133 RLPTLELHGRKPMVA 147
+ EL GR V+
Sbjct: 98 AMDGQELQGRNIRVS 112
>gi|75319742|sp|Q43472.1|GRP_HORVU RecName: Full=Glycine-rich RNA-binding protein blt801; AltName:
Full=Low temperature-responsive RNA-binding protein
gi|1229138|gb|AAB07749.1| low temperature-responsive RNA-binding protein [Hordeum vulgare
subsp. vulgare]
Length = 161
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + +A G D ID K + G+S+GF VT S+E+M +E
Sbjct: 9 FVGGLRWATDDQSLQNAFSKYG--DVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 67 MNGQDLDGRNITV 79
>gi|326487468|dbj|BAJ89718.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510625|dbj|BAJ87529.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518508|dbj|BAJ88283.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520529|dbj|BAK07523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527353|dbj|BAK04618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + +A G D ID K + G+S+GF VT S+E+M +E
Sbjct: 9 FVGGLAWATDDQSLQNAFSKYG--DVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 67 MNGQDLDGRNITV 79
>gi|114145394|dbj|BAF30986.1| glycine-rich RNA-binding protein [Triticum aestivum]
Length = 163
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + +A G D ID K + G+S+GF VT S+E+M +E
Sbjct: 9 FVGGLAWATDDQSLQNAFSKYG--DVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 67 MNGQDLDGRNITV 79
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+VGNL+W TT+ + DA G + K + +G+S+GF VT +++M +E
Sbjct: 45 CFVGNLSWSTTDESLKDAFSKYG--KVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIE 102
Query: 133 RLPTLELHGRKPMV 146
+ L+L GR V
Sbjct: 103 DMNGLDLEGRAITV 116
>gi|407918423|gb|EKG11694.1| Nucleotide-binding alpha-beta plait [Macrophomina phaseolina MS6]
Length = 420
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPD-FIDVKFFENASNGQSKGFCTVTLGSEESMSLV- 130
L + +L WWT E D+ G D +DV F E+ NG+SKG C V + S ++ + +
Sbjct: 120 LLISDLHWWTNEDDIRGWANQSGCEDELVDVTFNEHKVNGKSKGQCFVEMASPQAATALK 179
Query: 131 --MERLPTLELHGRKPMVAYPTRNV 153
+E + + +K +Y NV
Sbjct: 180 HTIESFGQGQQYAKKHSASYHAPNV 204
>gi|399931807|gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T + + DA + G D +D + + +G+S+GF V +ES + ++
Sbjct: 40 LFVGGLSWGTDDQSLRDAFATFG--DVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 133 RLPTLELHGRKPMVA 147
+ EL GR V+
Sbjct: 98 AMDGQELQGRNIRVS 112
>gi|399931799|gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T + + DA + G D +D + + +G+S+GF V +ES + ++
Sbjct: 40 LFVGGLSWGTDDQSLRDAFATFG--DVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 133 RLPTLELHGRKPMVA 147
+ EL GR V+
Sbjct: 98 AMDGQELQGRNIRVS 112
>gi|405973847|gb|EKC38537.1| Serine/threonine-protein kinase PAK 6 [Crassostrea gigas]
Length = 1486
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+++VGNL E D+ S G +V+ ++ +G KG C VT S++S+ L M
Sbjct: 377 SIFVGNLPLDIKEEDVRSHFESCG--KIRNVRVIRDSKSGVGKGICYVTFKSKDSVGLAM 434
Query: 132 ERLPTLELHGRKPMVAY 148
+L EL GRK + Y
Sbjct: 435 -KLKGTELSGRKARIEY 450
>gi|15218972|ref|NP_176208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|13194798|gb|AAK15561.1|AF348590_1 putative nucleic acid-binding protein [Arabidopsis thaliana]
gi|4249379|gb|AAD14476.1| Strong similarity to gb|X82030 chloroplast RNA binding protein
(RNP1) from Phaseolus vulgaris [Arabidopsis thaliana]
gi|21593720|gb|AAM65687.1| nucleic acid-binding protein, putative [Arabidopsis thaliana]
gi|222423361|dbj|BAH19654.1| AT1G60000 [Arabidopsis thaliana]
gi|332195527|gb|AEE33648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 258
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VGNL+W T ++ A R G D + + + G+S+G+ V S+ M +E
Sbjct: 179 LFVGNLSWTVTSESLAGAFRECG--DVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALE 236
Query: 133 RLPTLELHGR 142
L EL GR
Sbjct: 237 SLDGFELEGR 246
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
++ + LY GNL + A ++ I+ P+ ++V + N GQS+GF VT+ + E
Sbjct: 81 AAVNTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLY--NRDTGQSRGFAFVTMSNVED 138
Query: 127 MSLVMERLPTLELHGRKPMVAY-----PTRNVLY 155
+++++ L E GR V + P + LY
Sbjct: 139 CNIIIDNLDGTEYLGRALKVNFADKPKPNKEPLY 172
>gi|262199927|ref|YP_003271136.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262083274|gb|ACY19243.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 207
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSI---GVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
LYVGNL++ TTE +A+RS+ G + V + G+S+GF V + SE++
Sbjct: 3 SKLYVGNLSYSTTE----EALRSVFEEGGKEVRSVAIILDRETGRSRGFAFVQMASEDAA 58
Query: 128 SLVMERLPTLELHGRK 143
ME L EL GR+
Sbjct: 59 REAMESLDGRELDGRQ 74
>gi|357144334|ref|XP_003573255.1| PREDICTED: uncharacterized protein LOC100824407 [Brachypodium
distachyon]
Length = 226
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+VG+L+W TT+ D+ DA G + K + +G+S+GF VT +++M +E
Sbjct: 9 CFVGSLSWSTTDVDLKDAFGKFGR--VTETKVVLDKYSGRSRGFGFVTFDDKKAMEEAVE 66
Query: 133 RLPTLELHGRKPMV 146
+ ++L GR V
Sbjct: 67 AMNGIDLDGRNITV 80
>gi|403418291|emb|CCM04991.1| predicted protein [Fibroporia radiculosa]
Length = 389
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LY+G+L WWTT+ D+ ++GV D D+ F E+ NG+SKG V + + + +
Sbjct: 123 LYIGDLQWWTTDEDVRQVALNVGVTLDHKDITFSEHKVNGKSKGMAYVECHNCDHAAALK 182
Query: 132 ERLPTLELHGRKPMVAY 148
+ R+ V++
Sbjct: 183 NWFDNNDFQNRRATVSF 199
>gi|320586544|gb|EFW99214.1| rrm domain containing protein [Grosmannia clavigera kw1407]
Length = 578
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+ V L+WW T+ D+ IR++ D + D+ F E+ NG+SKG + S+++ +
Sbjct: 100 IMVSELSWWITDDDLRGWIRAVQCEDKLKDITFSEHKVNGKSKGQAYIEFTSQQAATASK 159
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRS 165
++ +L +P +V+Y NP R+
Sbjct: 160 HKIESLATGEYQP--GQKKHSVIYSSPTANPFRT 191
>gi|399931805|gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T + + DA + G D +D + + +G+S+GF V +ES + ++
Sbjct: 40 LFVGGLSWGTDDQSLRDAFATFG--DVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 133 RLPTLELHGRKPMV 146
+ EL GR V
Sbjct: 98 AMDGQELQGRNIRV 111
>gi|363814334|ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycine max]
gi|255639879|gb|ACU20232.1| unknown [Glycine max]
Length = 289
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYV NL+W T AD++D G DV+ ++ +G+SKG+ VT+ S E +
Sbjct: 81 KLYVVNLSWSLTAADINDLFAQSGT--VTDVEIIKS-KDGRSKGYAFVTMASGEEAQAAV 137
Query: 132 ERLPTLELHGRKPMVAYPTR 151
++ + EL GR V R
Sbjct: 138 DKFDSYELSGRIIRVELAKR 157
>gi|297839301|ref|XP_002887532.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
gi|297333373|gb|EFH63791.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
Length = 292
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S ++VG +++ T E + +A G + +D K + G+S+GF VT S E S
Sbjct: 32 SSSKIFVGGISYSTDEFGLREAFSKYG--EVVDAKIIVDRETGRSRGFAFVTFTSTEEAS 89
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
M+ L +LHGR+ V Y T
Sbjct: 90 NAMQ-LDGQDLHGRRIRVNYAT 110
>gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
gi|12324900|gb|AAG52402.1|AC020579_4 putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gi|25083154|gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|30023780|gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gi|332197447|gb|AEE35568.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
Length = 289
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S ++VG +++ T E + +A G + +D K + G+S+GF VT S E S
Sbjct: 32 SSSKIFVGGISYSTDEFGLREAFSKYG--EVVDAKIIVDRETGRSRGFAFVTFTSTEEAS 89
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
M+ L +LHGR+ V Y T
Sbjct: 90 NAMQ-LDGQDLHGRRIRVNYAT 110
>gi|168039508|ref|XP_001772239.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676409|gb|EDQ62892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 507
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++VG +T TTE D+ S G D +V+ ++ GQ+KG+ VT +EE +E
Sbjct: 127 IFVGGITRDTTEEDLRTLCSSCG--DVYEVRLLKDKDTGQNKGYAFVTFLNEECAEKAIE 184
Query: 133 RLPTLELHGRK 143
L E+ GRK
Sbjct: 185 TLNDSEVKGRK 195
>gi|313204169|ref|YP_004042826.1| rnp-1 like RNA-binding protein [Paludibacter propionicigenes WB4]
gi|312443485|gb|ADQ79841.1| RNP-1 like RNA-binding protein [Paludibacter propionicigenes WB4]
Length = 81
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+YVGNL++ E D+ I G + K ++ G+SKGF V + + + + V+
Sbjct: 2 NIYVGNLSYKVRENDLQGVIEEYGQVE--SCKIIKDRETGKSKGFAFVEMADDAAAAKVI 59
Query: 132 ERLPTLELHGRKPMV 146
E L E GR +V
Sbjct: 60 EELNGAEFDGRSMVV 74
>gi|168988195|gb|ACA35266.1| nuclear transport family protein [Cucumis sativus]
Length = 565
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VGNL+W T ++ A + G + + + + G+S+G+ V+ ++ M +E
Sbjct: 27 LFVGNLSWSVTSEILTQAFQEYG--NVVGARVIYDGETGKSRGYGFVSYSTKSEMETALE 84
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQNP 162
+ LEL GR V YQ Q P
Sbjct: 85 TINELELEGRVIRVGTYFVGQYYQVLQQQP 114
>gi|332028567|gb|EGI68604.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 316
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 26 TEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEA 85
+ ++ D DD+ Q F E G + ++ ++ S L+VG L+W TT+
Sbjct: 2 ADQENKDFSDDIAEQNFAEQNGEAENNGENNVAENNQE---SQEDRKLFVGGLSWETTDK 58
Query: 86 DMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
++ + + G + I+VK + + G+S+GF + ES+ +M
Sbjct: 59 ELREHFSAYGDIESINVK--TDPNTGRSRGFAFIVFAKAESLDKIM 102
>gi|320581591|gb|EFW95811.1| Subunit of cleavage factor I [Ogataea parapolymorpha DL-1]
Length = 431
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S +++G L W TTE M + G D ID+ ++ + G+S+GF +T S S
Sbjct: 102 SKDQGKMFIGGLNWETTEESMKNYFSQFG--DVIDLTIMKDNATGRSRGFGFLTFASSSS 159
Query: 127 MSLVMERLPTLELHGRKPMVAYP 149
+ V+++ L+ P A P
Sbjct: 160 VDEVLKKTHVLDGKLIDPKRAIP 182
>gi|393230075|gb|EJD37686.1| hypothetical protein AURDEDRAFT_173201 [Auricularia delicata
TFB-10046 SS5]
Length = 280
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
+L++G L WWT++AD+ + ++GV + + F E+ NG+SKG + GS E+ ++
Sbjct: 99 SLFIGELQWWTSDADLFKLVVALGVDIELKHITFSEHKVNGKSKGIAYIECGSLENALVI 158
>gi|393218616|gb|EJD04104.1| splicing factor, CC1-like protein [Fomitiporia mediterranea MF3/22]
Length = 464
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
S LYVG+L + TE+D+ G DF+D+ ++++ G+SKG+ +
Sbjct: 232 GASGRGATLYVGSLHFNLTESDIKQVFEPFGELDFVDL--HKDSATGRSKGYAFIHYKRA 289
Query: 125 ESMSLVMERLPTLELHGR 142
E + +E++ EL GR
Sbjct: 290 EDAKMALEQMEGFELAGR 307
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L++G L++ + + DA G D +D K + +G+S+GF V ++ES S
Sbjct: 34 SSSKLFIGGLSYGVDDQSLKDAFSGFG--DVVDAKVITDRDSGRSRGFGFVNFSNDESAS 91
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
+ + +L+GR V+Y
Sbjct: 92 SALSAMDGKDLNGRSIRVSYAN 113
>gi|291288414|ref|YP_003505230.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
gi|290885574|gb|ADD69274.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
Length = 94
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+YVGNL++ E ++ D +S G D V+ + G+SKGF V + +E
Sbjct: 1 MNIYVGNLSYKAMEDEIRDMFQSFG--DVASVRIITDHETGRSKGFGFVEMEDDEQAKAA 58
Query: 131 MERLPTLELHGR 142
+E L +E+ GR
Sbjct: 59 IEELNGVEMLGR 70
>gi|281200597|gb|EFA74815.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 425
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++VG ++ TE D+ S+G ++ +N NG+SKG+ +T + S + +E
Sbjct: 49 VFVGGVSKNVTEDDLQSVFNSVG--SVRQIRLMKNKLNGESKGYAFITFEDKSSCQMAVE 106
Query: 133 RLPTLELHGRKPMVAY 148
++ EL G+ V Y
Sbjct: 107 KISNKELKGKSLRVKY 122
>gi|119493013|ref|XP_001263762.1| RRM domain protein [Neosartorya fischeri NRRL 181]
gi|119411922|gb|EAW21865.1| RRM domain protein [Neosartorya fischeri NRRL 181]
Length = 398
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTV---TLGSEESMS 128
L + +L WWTT+ D+ I + G D + DV F E+ NG+SKG V TL + +
Sbjct: 114 LLISDLYWWTTDDDIRGWINAAGCEDELKDVTFSEHKVNGKSKGQAFVEFTTLQAATAAK 173
Query: 129 LVMERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSR 168
+E L GRK MV Y P N P+R ++
Sbjct: 174 HQIENLNVSSQGGRKYMVHYTNPHTNPFRTLPKDAPMRKDNQ 215
>gi|331241775|ref|XP_003333535.1| hypothetical protein PGTG_14957 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312525|gb|EFP89116.1| small subunit ribosomal protein S19 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 206
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VGNL W T + A G D +D ++ G+S+GF +T E + +E
Sbjct: 34 LFVGNLAWTTDSGSLKSAFGQFG--DVVDAIVMQDRETGRSRGFGFITFKEEAAAPGAIE 91
Query: 133 RLPTLELHGRKPMVAY 148
L EL GR+ V Y
Sbjct: 92 ALNGQELDGREIRVNY 107
>gi|2645699|gb|AAC61787.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 165
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ + +A G + +D K + G+S+GF VT +E+SM ++
Sbjct: 10 FVGGLAWATTDQSLQEAFSPYG--EILDSKIINDRETGRSRGFGFVTFNNEKSMRDAIQG 67
Query: 134 LPTLELHGRKPMV 146
+ + EL GR V
Sbjct: 68 MNSQELDGRNTTV 80
>gi|384493186|gb|EIE83677.1| hypothetical protein RO3G_08382 [Rhizopus delemar RA 99-880]
Length = 413
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
NLY+ NL T AD++ R G + + NA+ GQSKG+ V+ G E + +
Sbjct: 29 NLYIKNLDPNITNADLNHLFRKFG--RIVSARVMTNAATGQSKGYGFVSFGKSEEAAAAL 86
Query: 132 ERLPTLELHGRKPMVAY 148
+ + ++ R +VAY
Sbjct: 87 KEMNGYIVNDRPLIVAY 103
>gi|388855597|emb|CCF50820.1| uncharacterized protein [Ustilago hordei]
Length = 415
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+Y+G+L WW+T+ ++ ++GV D+ F E+ NG+SKG V SE+ +
Sbjct: 130 VYIGDLNWWSTDEEIRQIAANLGVTVSLNDITFSEHKVNGKSKGVAYVETDSEQDAKKIK 189
Query: 132 ERLPTLELHGRKPMVAYPT 150
+ + R+ V T
Sbjct: 190 QWFEENDFQFRRANVTLTT 208
>gi|111162637|gb|ABH07505.1| glycine-rich RNA-binding protein [Nicotiana attenuata]
Length = 152
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ + DA G + +D K + G+S+GF VT E++M +E
Sbjct: 9 FVGGLAWATTDQTLGDAFSQFG--EILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEG 66
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 67 MKGQDLDGRNITV 79
>gi|21388660|dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+VG L W TT+ + +A R G + + K + G+S+GF VT E SM+ ++
Sbjct: 7 CFVGGLAWATTDGSLEEAFRPFG--EVVQCKVITDRETGRSRGFGFVTFADENSMNEAIK 64
Query: 133 RLPTLELHGRKPMV 146
+ EL GR V
Sbjct: 65 DMNGKELDGRNITV 78
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A++ +VG L W T D+ A G D ++ K + G+S+GF VT SE
Sbjct: 2 ASADVEYRCFVGGLAWATDNYDLEKAFSQYG--DVVESKIINDRETGRSRGFGFVTFASE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
+SM +E + L GR V
Sbjct: 60 DSMRDAIEGMNGQNLDGRNITV 81
>gi|146328793|ref|YP_001209360.1| RNA recognition motif-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146232263|gb|ABQ13241.1| RNA recognition motif protein [Dichelobacter nodosus VCS1703A]
Length = 95
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+YVGNL++ TTE ++ +A G D + ++ +G+SKGF V + E+
Sbjct: 2 TNIYVGNLSYRTTEDELRNAFSQFG--DVQNASIIKDRDSGRSKGFGFVEMPDAEAAKKA 59
Query: 131 MERLPTLELHGR 142
+E L +L GR
Sbjct: 60 IESLNDKDLGGR 71
>gi|298528142|ref|ZP_07015546.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511794|gb|EFI35696.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
NLYVGNL W TTEA + D+ G + K E+ G+S+GF V + E
Sbjct: 2 TNLYVGNLPWSTTEAQLRDSFAEFG--EVSSAKIIEDRETGRSRGFGFVEM--ENGADEA 57
Query: 131 MERLPTLELHGR--KPMVAYPTR 151
+E L + GR K VA P R
Sbjct: 58 IEALNGKDYGGRSIKVNVAKPKR 80
>gi|50553814|ref|XP_504318.1| YALI0E23628p [Yarrowia lipolytica]
gi|49650187|emb|CAG79917.1| YALI0E23628p [Yarrowia lipolytica CLIB122]
Length = 621
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGN+ + TE ++ + G +F D+ + G+SKG+C + + + +E
Sbjct: 448 LYVGNIYFGVTEGEIIQIFEAFGPIEFADL---QKEKTGKSKGYCFIQYVNPDDAKTALE 504
Query: 133 RLPTLELHGRKPMVA 147
++ EL GRK V
Sbjct: 505 KMNGFELAGRKLRVG 519
>gi|194334049|ref|YP_002015909.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
gi|194311867|gb|ACF46262.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 90
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+Y+GNL + TE D+ +A G D + G+SKGF V + S + + +
Sbjct: 2 NIYIGNLDYGVTEEDLREAFGEFG--DVSSANIITDKFTGRSKGFGFVEMSSSDDANEAI 59
Query: 132 ERLPTLELHGR-------KPMVAYPTRNVLY 155
E L +L+GR KP P R Y
Sbjct: 60 ESLNDTDLNGRTIKVNEAKPRAERPARRYQY 90
>gi|410095935|ref|ZP_11290927.1| hypothetical protein HMPREF1076_00105 [Parabacteroides goldsteinii
CL02T12C30]
gi|409227966|gb|EKN20861.1| hypothetical protein HMPREF1076_00105 [Parabacteroides goldsteinii
CL02T12C30]
Length = 81
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+Y+GNL + E D+ + GV D VK ++ G+SKGF V + + +
Sbjct: 1 MNIYIGNLNYRVREEDLKQVMEEYGVVD--SVKIIKDRETGKSKGFAFVEMPDDAAAKKA 58
Query: 131 MERLPTLELHGRKPMV 146
+ L E GR+ +V
Sbjct: 59 IGELNEAEFEGRQMVV 74
>gi|168015710|ref|XP_001760393.1| predicted protein [Physcomitrella patens subsp. patens]
gi|21388658|dbj|BAC00785.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|76262794|gb|ABA41484.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|162688407|gb|EDQ74784.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ + A R G + + K + G+S+GF VT E SM+ ++
Sbjct: 10 FVGGLAWATTDGRLEGAFRPFG--EVVQSKVISDRETGRSRGFGFVTFADENSMNAAIKE 67
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 68 MNGQELDGRNITV 80
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 66 TSSSHCN------LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTV 119
T+S+H N LYVGN+ + TE D+ G +F+ + + NG+S+G+ V
Sbjct: 268 TTSAHPNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQL---QKDDNGRSRGYGFV 324
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMVAY--------PTRNVLYQFEAQNP 162
+E++ +L GR V T N+L +F QNP
Sbjct: 325 QYREASQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANILQRFPGQNP 375
>gi|224105391|ref|XP_002313795.1| predicted protein [Populus trichocarpa]
gi|222850203|gb|EEE87750.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ + +A G + ID K + G+S+GF VT G+E++M ++
Sbjct: 9 FVGGLAWATTDQVLQEAFSQYG--EIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDG 66
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 67 MNGQDLDGRNITV 79
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L++G L++ T + + +A G + I+ + + G+S+GF VT S E S
Sbjct: 38 SSSKLFIGGLSYSTDDTSLREAFYKYG--EVIEARVIVDRETGRSRGFGFVTFTSSEEAS 95
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
++ L +LHGR+ V Y T
Sbjct: 96 SAIQALDGQDLHGRRVRVNYAT 117
>gi|829254|emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L++G L+W T +A + DA G D +D K + G+S+GF V E + + +
Sbjct: 18 LFIGGLSWGTDDASLRDAFAHFG--DVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 75
Query: 133 RLPTLELHGR 142
+ EL+GR
Sbjct: 76 EMDGKELNGR 85
>gi|331241781|ref|XP_003333538.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312528|gb|EFP89119.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 179
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VGNL W T + A G D ID ++ G+S+GF +T E +E
Sbjct: 10 LFVGNLAWTTDSGSLKSAFGQFG--DVIDAIVMQDRETGRSRGFGFITFKEEADAPGAIE 67
Query: 133 RLPTLELHGRKPMVAYP 149
L EL GR+ V Y
Sbjct: 68 ALNGQELDGREIRVNYA 84
>gi|313203177|ref|YP_004041834.1| rnp-1 like RNA-binding protein [Paludibacter propionicigenes WB4]
gi|312442493|gb|ADQ78849.1| RNP-1 like RNA-binding protein [Paludibacter propionicigenes WB4]
Length = 81
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+YVGNL++ E D+ +AI G D K + +SKGF V + EE+ V+
Sbjct: 2 NIYVGNLSYNVRENDLQEAIAEYGQVD--SCKLIMDRETRRSKGFAFVEMSDEEAAKKVI 59
Query: 132 ERLPTLELHGRKPMV--AYPTR 151
L E GR +V A P +
Sbjct: 60 AELNGAEFDGRAMVVKEALPKK 81
>gi|294948928|ref|XP_002785965.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239900073|gb|EER17761.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 229
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL W T D+ D R G +D+ +G+S+GF TV ++ + +E
Sbjct: 153 IYVGNLPWRTAWQDLKDLFRECGEVIRVDIA---EGWDGRSRGFATVLFEEIDNAANAIE 209
Query: 133 RLPTLELHGRKPMV 146
+ E GRK +V
Sbjct: 210 KFNEYEFQGRKLLV 223
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
S C +YVGNL W TTE ++ D ++ +G +D+ ++G+SKG V E
Sbjct: 2 ASQEKC-VYVGNLDWTTTEDELGDHMKKVGPVVSVDIM---TRNDGKSKGCGIVEFKDTE 57
Query: 126 SMSLVMERLPTLELHGRKPMV 146
S++ +E L +L R+ V
Sbjct: 58 SVAKAIETLNDTKLGERQIFV 78
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVG+L + TE+D+ G +F+D+ + G+SKG+C + E + +
Sbjct: 209 QLYVGSLHFNLTESDIKQVFEPFGELEFVDL--HRDPMTGRSKGYCFIQYKRAEDAKMAL 266
Query: 132 ERLPTLELHGR 142
E++ EL GR
Sbjct: 267 EQMEGFELAGR 277
>gi|118489085|gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 171
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ + +A G + ID K + G+S+GF VT G+E++M ++
Sbjct: 10 FVGGLAWATTDQVLQEAFSQYG--EIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDG 67
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 68 MNGQDLDGRNITV 80
>gi|118481677|gb|ABK92779.1| unknown [Populus trichocarpa]
gi|118481702|gb|ABK92791.1| unknown [Populus trichocarpa]
gi|118482754|gb|ABK93295.1| unknown [Populus trichocarpa]
gi|118483202|gb|ABK93505.1| unknown [Populus trichocarpa]
Length = 170
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ + +A G + ID K + G+S+GF VT G+E++M ++
Sbjct: 10 FVGGLAWATTDQVLQEAFSQYG--EIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDG 67
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 68 MNGQDLDGRNITV 80
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L+VG +++ T + + +A G + ++ + + G+S+GF VT S E S
Sbjct: 38 SSSKLFVGGISFQTDDNSLKEAFDKYG--NVVEARIIMDRETGRSRGFGFVTYTSSEEAS 95
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
++ L +LHGR+ V Y T
Sbjct: 96 SAIQALDGQDLHGRRVRVNYAT 117
>gi|146197797|dbj|BAF57616.1| pRM10 protein [Dugesia japonica]
Length = 325
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W TTE D+ + + G +K + G S+GF VT+ +E+S+ V+E
Sbjct: 74 LFVGGLSWETTEEDLKNYFETWGKVAHCVIKL--DKMTGNSRGFGFVTMDTEDSLKKVLE 131
Query: 133 RLPTLELHGRK--PMVAYPTR 151
+P L +K P A PT+
Sbjct: 132 -VPEHRLKNKKIDPKPAKPTK 151
>gi|365982363|ref|XP_003668015.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
gi|343766781|emb|CCD22772.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
Length = 552
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S C L++G L W TTE + D G + +D+K ++A++G+S+GF ++ S
Sbjct: 225 SKESCKLFIGGLNWETTEEKLKDYFSKYG--NVVDLKIMKDANSGRSRGFGFLSFEHPSS 282
Query: 127 MSLVMERLPTLELHGRKPMVAYP 149
+ V++ L+ P A P
Sbjct: 283 VDEVVKSQHILDGKVIDPKRAIP 305
>gi|406993247|gb|EKE12437.1| Glycine-rich RNA-binding protein GRP1A [uncultured bacterium]
Length = 86
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
L+VGNL W T D+ G +D + G+S+GF VT+GS+
Sbjct: 2 QSKLFVGNLAWEVTVEDLKALFAGAG--SVVDAAVITDRMTGRSRGFGFVTMGSDAEAQT 59
Query: 130 VMERLPTLELHGRK 143
+E+ +L GRK
Sbjct: 60 AVEKFNQYDLKGRK 73
>gi|302695543|ref|XP_003037450.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
gi|300111147|gb|EFJ02548.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
Length = 409
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVG+L + TEAD+ G +F+D + + G+SKG+ V E + M
Sbjct: 183 QLYVGSLHFNLTEADIKQVFEPFGELEFVD--LHRDPTTGRSKGYAFVQYKRAEDARMAM 240
Query: 132 ERLPTLELHGRKPMV 146
E++ EL GR+ V
Sbjct: 241 EQMEGFELAGRQLKV 255
>gi|289740797|gb|ADD19146.1| RNA-binding protein ELAV/HU [Glossina morsitans morsitans]
Length = 343
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
+SS HC L++G+L + TE + A R +G D V+ N G+ G+C V ++E
Sbjct: 2 SSSVHCQLWMGSLEPYMTENFIIAAFRKMG-EDPTTVRLMRNKYTGEPAGYCFVNFATDE 60
Query: 126 SMSLVMERLPTLELHGRKPMVAY 148
M +L + G P+V +
Sbjct: 61 QAMDAMHKLNGKPIPGTNPIVRF 83
>gi|6911142|gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A++ +VG L W TT+ +S+A G + ++ K + G+S+GF VT G E
Sbjct: 2 ASADVEFRCFVGGLAWATTDQSLSEAFSQYG--EVLESKIINDRETGRSRGFGFVTFGDE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
+SM +E + L GR V
Sbjct: 60 KSMKDAIEGMNGQTLDGRNVTV 81
>gi|402224872|gb|EJU04934.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 380
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVG L WWTT+ D+ +++GV + ++ F E+ NG+SKG + + + V
Sbjct: 122 LYVGELHWWTTDEDLRQVAQNLGVQLEHKNITFSEHKVNGKSKGIAYIQFENADEAQKVK 181
Query: 132 ERLPTLELHGRKPMV 146
+ + + G + V
Sbjct: 182 DWFDSNDFQGHRANV 196
>gi|226532108|ref|NP_001142375.1| uncharacterized protein LOC100274547 [Zea mays]
gi|194708524|gb|ACF88346.1| unknown [Zea mays]
Length = 163
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Query: 37 VTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGV 96
V P P G +P R S + +YVGNL W + + + G
Sbjct: 46 VNCGPPPPRDGSAPRAPRGGGGGGGGGSFVDSGN-KVYVGNLAWGVDNSTLENLFSEQG- 103
Query: 97 PDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMV 146
+D K + +G+S+GF VT GS E ++ + L ++L GR+ V
Sbjct: 104 -QVLDAKVIYDRDSGRSRGFGFVTYGSAEEVNNAISNLDGIDLDGRQIRV 152
>gi|209882353|ref|XP_002142613.1| RNA recognition domain-containing protein [Cryptosporidium muris
RN66]
gi|209558219|gb|EEA08264.1| RNA recognition domain-containing protein [Cryptosporidium muris
RN66]
Length = 199
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
++V NL W TT D++ IG D +V +F+ +G+S+G TV L +
Sbjct: 124 QVFVTNLAWKTTRDDLAKVFSEIGPLDSCEVFYFD---DGRSRGIATVVFKDLSHAQLAV 180
Query: 132 ERLPTLELHGRKPMV 146
E+L E+ GR+ +V
Sbjct: 181 EKLNDREVDGREILV 195
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T+ + +A S G + +D K + G+S+GF VT SE SM +E
Sbjct: 11 FVGGLAWATSNESLENAFASYG--EILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|224128992|ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus trichocarpa]
gi|222839293|gb|EEE77630.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L++G L W T + + DA G + + + + G+S+GF V+ S ES S
Sbjct: 34 SSSKLFIGGLAWSTDDQSLKDAFSGFG--EVTEARVITDRDTGRSRGFGFVSYESTESAS 91
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
+ + EL GR V Y T
Sbjct: 92 EALSAMDGQELGGRNIRVGYAT 113
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S S L+VG L++ T E+ + + G + I+ + + G+S+GF ++ S E
Sbjct: 36 SMSSSKLFVGGLSYGTDESSLKETFSQYG--EVIEARVILDRETGRSRGFGFISFPSSEE 93
Query: 127 MSLVMERLPTLELHGRKPMVAYPT 150
+ M+ + +LHGR+ V Y T
Sbjct: 94 ATSAMQAMDGQDLHGRRIKVNYAT 117
>gi|168035555|ref|XP_001770275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678492|gb|EDQ64950.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ + +A R G + + K + G+S+GF VT E SM+ ++
Sbjct: 5 FVGGLAWATTDGSLEEAFRPFG--EVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKD 62
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 63 MNGKELDGRNITV 75
>gi|346320404|gb|EGX90004.1| RRM domain protein [Cordyceps militaris CM01]
Length = 471
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGV-PDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+ + + WWTT+ D+ R+ D D+ F E+ NG+SKG V S ++ +
Sbjct: 98 IMISEMNWWTTDDDIRGWSRAADAEKDIKDITFSEHKINGKSKGQAFVEFNSRQAATATK 157
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRS 165
L L + A+ V+Y +QNP ++
Sbjct: 158 HHLDKLSA--EESQGAHKKLTVMYWNASQNPFKT 189
>gi|469071|dbj|BAA03742.1| RNA-binding glycine-rich protein-1b [Nicotiana sylvestris]
gi|295393565|gb|ADG03638.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 148
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+ +VG L W TT+ ++DA + G + +D K + G+S+GF VT E+ M +
Sbjct: 7 SCFVGGLAWATTDRTLADAFGTYG--EVLDSKIINDRETGRSRGFGFVTFKDEKCMRDAI 64
Query: 132 ERLPTLELHGRKPMV 146
E + EL GR V
Sbjct: 65 EGMNGQELDGRSITV 79
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L+VG L+W T + + DA S G + D K + G+S+GF V E+
Sbjct: 33 SSSRLFVGGLSWGTDDQSLKDAFSSFG--EVTDAKVITDRETGRSRGFGFVNFVDNEAAG 90
Query: 129 LVMERLPTLELHGRKPMVAYP 149
+ + +EL+GR V++
Sbjct: 91 SALSSMDGVELNGRSIRVSFA 111
>gi|187373099|gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ + DA G + +D K + G+S+GF VT E++M +E
Sbjct: 9 FVGGLAWATTDQTLGDAFSQYG--EIVDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 67 MNGQDLDGRNITV 79
>gi|388851938|emb|CCF54532.1| related to Transformer-2 protein [Ustilago hordei]
Length = 358
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L V L+ T EAD+ D +I D + V + +A +G+S+GF VT+ + S +E
Sbjct: 132 LGVFGLSIRTVEADLKDEFEAIAPVDKVVVVY--DARSGRSRGFGFVTMRDVDGASAAIE 189
Query: 133 RLPTLELHGRKPMVAYPT 150
L +LHGRK V + T
Sbjct: 190 ALNGKDLHGRKIRVDFST 207
>gi|168026220|ref|XP_001765630.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683056|gb|EDQ69469.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 86
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL W EAD++ + + V D V+ + +S+GF VT+ + + ++
Sbjct: 8 LYVGNLAWSVGEADLAKVCQGLHVGDVKKVEVIYDQQRRKSRGFAFVTMATNDDAHALIS 67
Query: 133 RLPTLELHGRKPMVAYP 149
L + GR V +
Sbjct: 68 ALDGFYMRGRALKVNFA 84
>gi|298528161|ref|ZP_07015565.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511813|gb|EFI35715.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
NLYVGNL W TTEA + D G + K E+ G+S+GF V + E
Sbjct: 2 TNLYVGNLPWSTTEAQLRDLFAEYG--EVSSAKIIEDRETGRSRGFGFVEM--ENGADEA 57
Query: 131 MERLPTLELHGR--KPMVAYPTRNVLY 155
+E L + GR K VA P R +
Sbjct: 58 IESLNGTDFGGRNIKVNVAKPKREARF 84
>gi|2674201|gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 164
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ + +A G + +D K + G+S+GF VT +E+SM ++
Sbjct: 10 FVGGLAWATTDQSLQEAFSPYG--EILDSKIINDRETGRSRGFGFVTFNNEKSMRDAIQG 67
Query: 134 LPTLELHGRKPMV 146
+ + EL GR V
Sbjct: 68 MNSQELDGRNITV 80
>gi|2826811|emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L++G L+W T +A + DA G D +D K + G+S+GF V E + + +
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFG--DVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 94
Query: 133 RLPTLELHGR 142
+ EL+GR
Sbjct: 95 EMDGKELNGR 104
>gi|451997206|gb|EMD89671.1| hypothetical protein COCHEDRAFT_1177462 [Cochliobolus
heterostrophus C5]
Length = 407
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPD-FIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + ++ WW +E D+ G D I+V F E+ NG+SKG L S ++ + +
Sbjct: 122 LMINDVNWWISEEDIRGWANQSGCEDELIEVTFNEHKVNGKSKGQVFTLLNSPQAATALK 181
Query: 132 ERLPTL---ELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSR 168
++ TL + H +KP + P N P R + R
Sbjct: 182 HQIETLFKDQAHTKKPTAIFSPPHVNPFKTLPKDVPARDKGR 223
>gi|406983427|gb|EKE04629.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 96
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
L++GNL + T+E D+ + ++ G + ++ ++ G+SKGF V + ++E V
Sbjct: 1 MKLFIGNLNFKTSEEDLMELLKEYG--EVKSLQIIKDRDTGRSKGFGFVEMATKEQAESV 58
Query: 131 MERLPTLELHGRKPMVAYP 149
ME L E G+ V Y
Sbjct: 59 MENLNGAEFDGKVLKVDYA 77
>gi|451852471|gb|EMD65766.1| hypothetical protein COCSADRAFT_87301 [Cochliobolus sativus ND90Pr]
Length = 406
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPD-FIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + ++ WW +E D+ G D I+V F E+ NG+SKG L S ++ + +
Sbjct: 122 LMINDVNWWISEEDIRGWANQSGCEDELIEVTFNEHKVNGKSKGQVFTLLNSPQAATALK 181
Query: 132 ERLPTL---ELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSR 168
++ TL + H +KP + P N P R + R
Sbjct: 182 HQIETLFKDQAHTKKPTAIFSPPHVNPFKTLPKDVPARDKGR 223
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T+ + +A S G + +D K + G+S+GF VT SE SM +E
Sbjct: 11 FVGGLAWATSNESLENAFASYG--EILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T+ + +A S G + +D K + G+S+GF VT SE SM +E
Sbjct: 11 FVGGLAWATSNESLENAFASYG--EILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T+ + +A S G + +D K + G+S+GF VT SE SM +E
Sbjct: 11 FVGGLAWATSNESLENAFASYG--EILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|195645042|gb|ACG41989.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 142
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T+ + +A S G + +D K + G+S+GF VT SE SM +E
Sbjct: 11 FVGGLAWATSNESLENAFASYG--EILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|194700358|gb|ACF84263.1| unknown [Zea mays]
gi|413933458|gb|AFW68009.1| responsive to abscisic acid15 [Zea mays]
Length = 140
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T+ + +A S G + +D K + G+S+GF VT SE SM +E
Sbjct: 11 FVGGLAWATSNESLENAFASYG--EILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L++G L++ + + DA G D +D K + +G+S+GF V ++ES S
Sbjct: 34 SSSKLFIGGLSYGVDDQSLKDAFSGFG--DVVDAKVITDRDSGRSRGFGFVNFSNDESAS 91
Query: 129 LVMERLPTLELHGRKPMVAYP 149
+ + +L GR V+Y
Sbjct: 92 SALSAMDGKDLDGRSIRVSYA 112
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 51 ARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASN 110
AR HHH T+ H LYVGN+ + TE D+++ G +F+ ++ E
Sbjct: 256 ARNTESTSGHHH---TAPFH-RLYVGNVHFSITEEDLTNVFEPFGELEFVQLQKDE---T 308
Query: 111 GQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVA 147
G+SKG+ V + E +E++ EL GR V
Sbjct: 309 GRSKGYAFVQFANPEQARDALEKMNGFELAGRAIRVG 345
>gi|367042234|ref|XP_003651497.1| hypothetical protein THITE_2111882 [Thielavia terrestris NRRL 8126]
gi|346998759|gb|AEO65161.1| hypothetical protein THITE_2111882 [Thielavia terrestris NRRL 8126]
Length = 408
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L V L WW T+ D+ +R G + ++ F E+ NG+SKG V ++++ +
Sbjct: 104 LLVSELNWWNTDDDIRGWVRQAGCEHELKEITFSEHKINGKSKGQAYVEFTTQQAATATK 163
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRS 165
R+ L +P +V+Y + NP R+
Sbjct: 164 HRIDALANETNQP--GQKRHSVIYSSPSHNPFRT 195
>gi|30682622|ref|NP_849377.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657934|gb|AEE83334.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 153
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L++G L+W T +A + DA G D +D K + G+S+GF V E + + +
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFG--DVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 94
Query: 133 RLPTLELHGR 142
+ EL+GR
Sbjct: 95 EMDGKELNGR 104
>gi|30692254|ref|NP_849523.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661645|gb|AEE87045.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 126
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + D+ G D ID K + +G+S+GF VT E++M +E
Sbjct: 9 FVGGLAWATNDEDLQRTFSQFG--DVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 67 MNGKELDGRVITV 79
>gi|15236359|ref|NP_193121.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|25090505|sp|Q9SVM8.1|GRP2_ARATH RecName: Full=Glycine-rich RNA-binding protein 2, mitochondrial;
Short=AtGRP2; Flags: Precursor
gi|4455314|emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|7268089|emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|18252853|gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|21553749|gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|25084267|gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|332657933|gb|AEE83333.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 158
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L++G L+W T +A + DA G D +D K + G+S+GF V E + + +
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFG--DVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 94
Query: 133 RLPTLELHGR 142
+ EL+GR
Sbjct: 95 EMDGKELNGR 104
>gi|15235002|ref|NP_195637.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|544425|sp|Q03251.1|GRP8_ARATH RecName: Full=Glycine-rich RNA-binding protein 8; AltName:
Full=Protein CCR1
gi|16305|emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
gi|166658|gb|AAA20201.1| ORF [Arabidopsis thaliana]
gi|166839|gb|AAA32854.1| RNA-binding protein [Arabidopsis thaliana]
gi|4914438|emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|7270909|emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|222423067|dbj|BAH19515.1| AT4G39260 [Arabidopsis thaliana]
gi|332661644|gb|AEE87044.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 169
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + D+ G D ID K + +G+S+GF VT E++M +E
Sbjct: 9 FVGGLAWATNDEDLQRTFSQFG--DVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 67 MNGKELDGRVITV 79
>gi|351725383|ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+++TTE +S+A + G I+ K + + +SKGF VT S++ +E
Sbjct: 31 LFVGGLSFYTTENALSEAFSNYG--QVIEAKIVTDRVSDRSKGFGFVTFASQDEAENAIE 88
Query: 133 RLPTLELHGRKPMVAYPTRNV 153
+ L+GR V Y N+
Sbjct: 89 DMKGKTLNGRVIFVDYAKPNI 109
>gi|168037600|ref|XP_001771291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677380|gb|EDQ63851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 87
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ + A R G D I K + G+S+GF +T E +M+ ++
Sbjct: 5 FVGGLAWATTDDRLEQAFRPFG--DVIQSKVISDRETGRSRGFGFITFADENAMNEAIKE 62
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 63 MNGKELDGRNITV 75
>gi|145333039|ref|NP_001078385.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657935|gb|AEE83335.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 144
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L++G L+W T +A + DA G D +D K + G+S+GF V E + + +
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFG--DVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 94
Query: 133 RLPTLELHGR 142
+ EL+GR
Sbjct: 95 EMDGKELNGR 104
>gi|389741761|gb|EIM82949.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 145
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
+YVGNL+W TT+ + A G +D + G+S+GF VT G+ E
Sbjct: 3 AKVYVGNLSWNTTDDTLRQAFSEFGA--ILDSIVMRDRETGRSRGFGFVTFGTPEEADAA 60
Query: 131 MERLPTLELHGRKPMV 146
+ L EL GR+ V
Sbjct: 61 INNLNEQELDGRRIRV 76
>gi|326428383|gb|EGD73953.1| hypothetical protein PTSG_05647 [Salpingoeca sp. ATCC 50818]
Length = 372
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
++YVGNL+W TT + + + IG F DV NG+SKG V G E+ + +
Sbjct: 59 SVYVGNLSWSTTWPRLKEFMSEIGHVAFADVL---RDMNGRSKGCGIVVFGDVETANRAI 115
Query: 132 ERLPTLELHGRKPMV 146
+ EL GR+ MV
Sbjct: 116 AEMSGRELDGRQIMV 130
>gi|242055771|ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
gi|241929006|gb|EES02151.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
Length = 146
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
NL++G L++ T E + DA G D I V+ + + G+SKGF V SE + +
Sbjct: 60 NLFIGGLSYDTNETALKDAFSQYG--DVIAVRVICHPTTGKSKGFGFVKFSSENQAAAAL 117
Query: 132 ERLPTLELHGRKPMVAYP 149
++L L GR V Y
Sbjct: 118 QKLNGQVLDGRNIRVHYA 135
>gi|169596040|ref|XP_001791444.1| hypothetical protein SNOG_00769 [Phaeosphaeria nodorum SN15]
gi|160701215|gb|EAT92264.2| hypothetical protein SNOG_00769 [Phaeosphaeria nodorum SN15]
Length = 410
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + ++ WW +E D+ G D + +V F E+ NG+SKG V L S ++ + +
Sbjct: 122 LMINDVNWWVSEEDIRGWANQSGCEDELNEVTFNEHKVNGKSKGQVYVQLQSPQAATALK 181
Query: 132 ERLPTL---ELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSR 168
++ L + H +KP + P N P R + R
Sbjct: 182 HQIDNLFKDQAHAKKPTAIFNPPQHNPFKTLPKDVPARDKGR 223
>gi|399886791|gb|AFP52931.1| RBP1 [Hordeum vulgare]
Length = 162
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG+L+W T + + A S G + +D K + G+S+GF V+ +E++M +E
Sbjct: 12 FVGSLSWNTDDRGLEAAFSSFG--EILDAKIINDRETGRSRGFGFVSFSNEQAMQDAIEG 69
Query: 134 LPTLELHGRKPMV 146
+ EL GR +V
Sbjct: 70 MNGKELDGRSIVV 82
>gi|393245114|gb|EJD52625.1| hypothetical protein AURDEDRAFT_111257 [Auricularia delicata
TFB-10046 SS5]
Length = 103
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL+W TT+ + A + G +D + G+S+GF VT GS + ++
Sbjct: 5 VYVGNLSWNTTDETLRSAFQDFG--QILDSIVMRDRDTGRSRGFGFVTFGSPQEADSAIQ 62
Query: 133 RLPTLELHGRKPMV 146
L EL GR+ V
Sbjct: 63 ALNDQELDGRRIKV 76
>gi|359806610|ref|NP_001241528.1| uncharacterized protein LOC100820203 [Glycine max]
gi|255645445|gb|ACU23218.1| unknown [Glycine max]
gi|255645775|gb|ACU23380.1| unknown [Glycine max]
Length = 289
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 64 QATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGS 123
Q + SS LY GNL + A ++ I+ G + I+V + + G+S+GF VT+
Sbjct: 110 QDSDSSATKLYFGNLPYSVDSAKLAGLIQDFGSAELIEVLY--DRDTGKSRGFAFVTMSC 167
Query: 124 EESMSLVMERLPTLELHGRKPMVAYPTR 151
E + V+E L E GR V + ++
Sbjct: 168 IEDCNAVIENLDGKEFLGRTLRVNFSSK 195
>gi|30692256|ref|NP_849524.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661646|gb|AEE87046.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 92
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + D+ G D ID K + +G+S+GF VT E++M +E
Sbjct: 9 FVGGLAWATNDEDLQRTFSQFG--DVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 67 MNGKELDGRVITV 79
>gi|391863124|gb|EIT72438.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 398
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + +L WWTT+ D+ +R D + DV F E+ NG+SKG + + ++ +
Sbjct: 114 LLISDLYWWTTDDDIRGWVREADCEDELKDVTFSEHKVNGKSKGQAFIEFTTLQAATATK 173
Query: 132 ERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSR 168
+L + GRK V Y P N P+R ++
Sbjct: 174 HKLESSSTTGRKYSVNYTNPQPNPFRTLPKDAPMRKDNQ 212
>gi|356534904|ref|XP_003535991.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 64 QATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGS 123
Q + SS LY GNL + A ++ I+ G + I+V + + +G+S+GF VT+
Sbjct: 103 QDSDSSATKLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLY--DRDSGKSRGFAFVTMSC 160
Query: 124 EESMSLVMERLPTLELHGRKPMVAYPTR 151
E + V+E L E GR V + ++
Sbjct: 161 IEDCNAVIENLDGKEFLGRTLRVNFSSK 188
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VGNL+W T ++ A + G + + + G+S+G+ V ++ M +
Sbjct: 202 KLFVGNLSWSVTNEILTQAFQEYGT--VVGARVLYDGETGRSRGYGFVCYSTQAEMEAAV 259
Query: 132 ERLPTLELHGRKPMVA 147
L +EL GR V+
Sbjct: 260 AALNDVELEGRAMRVS 275
>gi|326523287|dbj|BAJ88684.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VGNL+W T ++DA + G + + + + G+S+G+ V ++E M +
Sbjct: 342 KLFVGNLSWTVTPEMLTDAFQRCG--NVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAI 399
Query: 132 ERLPTLELHGRK 143
E L E+ GR+
Sbjct: 400 ETLNGTEIEGRE 411
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LY GNL + A ++ ++ VP+ ++V + + + G+S+GF VT+ + E V+
Sbjct: 251 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLY--DRTTGRSRGFAFVTMSTLEDCERVI 308
Query: 132 ERLPTLELHGR 142
+ L GR
Sbjct: 309 KNLDGTLYSGR 319
>gi|12659074|gb|AAK01176.1| RNA-binding protein [Triticum aestivum]
Length = 183
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+VG+L+W TT+ D+ DA G + K + +G+S+GF VT +++M +E
Sbjct: 9 CFVGSLSWNTTDVDLKDAFGKFGR--VTETKVVLDKFSGRSRGFGFVTFDDKKAMEEAVE 66
Query: 133 RLPTLELHGRKPMV 146
+ ++L GR V
Sbjct: 67 AMNGIDLDGRNITV 80
>gi|78356222|ref|YP_387671.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
gi|78218627|gb|ABB37976.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
Length = 114
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+YVGNL++ +E D+ A G D V+ + G+SKGF V + + + +
Sbjct: 2 NIYVGNLSYQMSEDDLRGAFEEFGAVD--KVRIITDHDTGRSKGFGFVEMAEDSEANAAI 59
Query: 132 ERLPTLELHGRKPMV 146
E L E+ GR V
Sbjct: 60 EALNGREMGGRSITV 74
>gi|2226370|gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ + DA G + +D K + G+S+GF VT E++M +E
Sbjct: 9 FVGGLAWATTDQTLGDAFSQYG--EILDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 67 MNGQDLDGRNITV 79
>gi|407929152|gb|EKG21988.1| MFS pantothenate transporter [Macrophomina phaseolina MS6]
Length = 345
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L++GN+++ ++ D++D R+I + +DV+ + GQ +GF E S + E
Sbjct: 262 LFIGNMSFEMSDRDLNDLFRNIR--NVLDVRVAIDRRTGQPRGFAHADFIDETSATKAKE 319
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQ 156
L EL+GR+ V Y N Q
Sbjct: 320 LLSQKELYGRRLRVDYTESNKTNQ 343
>gi|121704890|ref|XP_001270708.1| RRM domain protein [Aspergillus clavatus NRRL 1]
gi|119398854|gb|EAW09282.1| RRM domain protein [Aspergillus clavatus NRRL 1]
Length = 400
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 7/132 (5%)
Query: 44 EHTGRSPARYRH-HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFI-D 101
E T +PA + R H + + L + +L WWTT+ D+ I G D + D
Sbjct: 84 ESTHETPAPQQGVKRKEHDDRPSDPDATTALLISDLYWWTTDDDIRGWINEAGCEDELKD 143
Query: 102 VKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLEL---HGRKPMVAY--PTRNVLYQ 156
V F E+ NG+SKG + + ++ + ++ L L GRK M+ Y P N
Sbjct: 144 VTFSEHKVNGKSKGQAFIEFTTLQAATASKHKIENLNLAGQGGRKYMIHYTNPHTNPFRT 203
Query: 157 FEAQNPLRSRSR 168
P+R ++
Sbjct: 204 LPKDAPMRKDNQ 215
>gi|2366750|dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931789|gb|AFP57444.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich protein [Nicotiana acuminata]
gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich protein [Nicotiana alata]
gi|399931809|gb|AFP57454.1| RNA-binding glycine-rich protein [Nicotiana sylvestris]
Length = 144
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T + + DA + G D +D + + +G+S+GF V +E + ++
Sbjct: 40 LFVGGLSWGTDDQSLRDAFATFG--DVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIK 97
Query: 133 RLPTLELHGRKPMVA 147
+ EL GR V+
Sbjct: 98 AMDGQELQGRNIRVS 112
>gi|145333041|ref|NP_001078386.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657936|gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 129
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L++G L+W T +A + DA G D +D K + G+S+GF V E + + +
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFG--DVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 94
Query: 133 RLPTLELHGR 142
+ EL+GR
Sbjct: 95 EMDGKELNGR 104
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
L++G L W T E + DA G + I+V+ ++ G+S+GF V+ +++
Sbjct: 37 SKLFIGGLAWGTEERGLRDAFSPFG--EIIEVRVIQDRETGRSRGFGFVSYITDQEAQKA 94
Query: 131 MERLPTLELHGRKPMVAYPTR 151
ME + L GR V Y T+
Sbjct: 95 MEAMDGRVLDGRTIRVNYATQ 115
>gi|121534066|ref|ZP_01665891.1| RNP-1 like RNA-binding protein [Thermosinus carboxydivorans Nor1]
gi|121307169|gb|EAX48086.1| RNP-1 like RNA-binding protein [Thermosinus carboxydivorans Nor1]
Length = 83
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL W TTEA ++DA R G + + G+S+GF V + E++ +V
Sbjct: 5 LYVGNLPWGTTEAALADAFRPYGT--VYSSRIIMDKETGRSRGFGFVEVADEDAEKMVTA 62
Query: 133 RLPTLELHGRKPMV 146
+ EL GR+ +V
Sbjct: 63 -MNGSELGGRQIVV 75
>gi|388521331|gb|AFK48727.1| unknown [Lotus japonicus]
Length = 285
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYV NL W + AD+ D G DV+ +G+ KG+ VT+ S E +
Sbjct: 87 KLYVFNLPWSMSAADIKDLFGQCGT--VTDVEII-RGKDGRGKGYAFVTMASGEEAQAAV 143
Query: 132 ERLPTLELHGRKPMVAYPTR 151
++ TLEL GR V R
Sbjct: 144 DKFDTLELSGRILRVELAKR 163
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 59 SHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCT 118
S H ++S LYVG+L + TE+D+ G +F+D+ ++ G+SKG+
Sbjct: 343 SLHLPPGVTASGAILYVGSLHFNLTESDIKQVFEPFGELEFVDL--HKDPMTGRSKGYAF 400
Query: 119 VTLGSEESMSLVMERLPTLELHGR 142
V E + +E++ EL GR
Sbjct: 401 VQYKRAEDARMALEQMEGFELAGR 424
>gi|326487400|dbj|BAJ89684.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511469|dbj|BAJ87748.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511763|dbj|BAJ92026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514088|dbj|BAJ92194.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527877|dbj|BAJ88990.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534068|dbj|BAJ89384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VGNL+W T ++DA + G + + + + G+S+G+ V ++E M +
Sbjct: 226 KLFVGNLSWTVTPEMLTDAFQRCG--NVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAI 283
Query: 132 ERLPTLELHGRK 143
E L E+ GR+
Sbjct: 284 ETLNGTEIEGRE 295
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LY GNL + A ++ ++ VP+ ++V + + + G+S+GF VT+ + E V+
Sbjct: 135 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLY--DRTTGRSRGFAFVTMSTLEDCERVI 192
Query: 132 ERLPTLELHGR 142
+ L GR
Sbjct: 193 KNLDGTLYSGR 203
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A + G + +D K + G+S+GF VT SE+SM +E
Sbjct: 11 FVGGLAWATDDRSLEAAFSTYG--EILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 66 TSSSHCN------LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTV 119
T+++H N LYVGN+ + TE D+ G +F+ + + NG+S+G+ V
Sbjct: 268 TTAAHPNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQL---QKDDNGRSRGYGFV 324
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMVAY--------PTRNVLYQFEAQNP 162
+E++ +L GR V T N+L +F QNP
Sbjct: 325 QYREASQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANILQRFPGQNP 375
>gi|344302744|gb|EGW33018.1| hypothetical protein SPAPADRAFT_60343 [Spathaspora passalidarum
NRRL Y-27907]
Length = 457
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 54 RHHRYSHHHSQATSSSHCNLYVGNL-TWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQ 112
R + YS H S+ T + L++G+L + WT EA D I + V + VK + N
Sbjct: 72 RQNVYSQHSSRYTQDNQFQLWMGDLDSNWTEEA--IDYIWASLVEKPVSVKIIRDKLNPT 129
Query: 113 SKGFCTVTLGSEESMSLVMER 133
G+C VT +++S+ L M+R
Sbjct: 130 KPGYCFVTFNNQKSVDLAMQR 150
>gi|393785537|ref|ZP_10373687.1| hypothetical protein HMPREF1071_04555 [Bacteroides salyersiae
CL02T12C01]
gi|392662292|gb|EIY55856.1| hypothetical protein HMPREF1071_04555 [Bacteroides salyersiae
CL02T12C01]
Length = 81
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+YVGNL + EAD+ + G VK + G+SKGF + + + + S +
Sbjct: 2 NIYVGNLNYRVKEADLQQVMEDYGTVS--SVKVIMDRETGRSKGFAFIEMEDDAAASKAI 59
Query: 132 ERLPTLELHGRKPMV 146
L E HGR +V
Sbjct: 60 AELNGAEYHGRTMVV 74
>gi|78185978|ref|YP_374021.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78165880|gb|ABB22978.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 99
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+Y+GNL + +E D+ DA G D ++ + +G+SKGF V + S+E+
Sbjct: 10 MNIYIGNLPYSVSEDDLRDAFSQFGQVDSANI--IMDKFSGRSKGFGFVDMSSDEAGRAA 67
Query: 131 MERLPTLELHGRKPMV 146
+E + E GR V
Sbjct: 68 IEAMNEQEFKGRTIKV 83
>gi|393789438|ref|ZP_10377559.1| hypothetical protein HMPREF1068_03839 [Bacteroides nordii
CL02T12C05]
gi|392650886|gb|EIY44552.1| hypothetical protein HMPREF1068_03839 [Bacteroides nordii
CL02T12C05]
Length = 81
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+YVGNL + EAD+ + G VK + G+SKGF + + + + S +
Sbjct: 2 NIYVGNLNYRVKEADLQQVMEDYGTVS--SVKVIMDRETGRSKGFAFIEMEDDTAASKAI 59
Query: 132 ERLPTLELHGRKPMV 146
L E HGR +V
Sbjct: 60 AELNGAEYHGRTMVV 74
>gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ + +A G + ++ K + G+S+GF VT G E+SM +E
Sbjct: 9 FVGGLAWATTDRTLGEAFSQYG--EVLESKIINDRETGRSRGFGFVTFGDEKSMRDAIEG 66
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 67 MNGQDLDGRNITV 79
>gi|357112177|ref|XP_003557886.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
[Brachypodium distachyon]
Length = 272
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 5/113 (4%)
Query: 37 VTLQPFPEHTGRSPARYRHHR---YSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRS 93
V P P SP +R + S+ S +YVGNL+W ++ +++
Sbjct: 150 VNSGPPPPRDQSSPRGFREQSSGGFRQQSSRGPSGGDNRVYVGNLSWNVDDSALANLFNE 209
Query: 94 IGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMV 146
G + + + +G+S+GF VT GS E + + L +L GR+ V
Sbjct: 210 QG--SVLGARVIYDRESGRSRGFGFVTYGSSEEVEKAVSNLDGTDLDGRQIRV 260
>gi|317151414|ref|XP_003190517.1| RRM domain protein [Aspergillus oryzae RIB40]
Length = 398
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + +L WWTT+ D+ +R D + DV F E+ NG+SKG + + ++ +
Sbjct: 114 LLISDLYWWTTDDDIRGWVREADCEDELKDVTFSEHKVNGKSKGQAFIEFTTLQAATATK 173
Query: 132 ERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSR 168
+L + GRK V Y P N P+R ++
Sbjct: 174 HKLESSGTTGRKYSVNYTNPQPNPFRTLPKDAPMRKDNQ 212
>gi|189202440|ref|XP_001937556.1| RRM domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984655|gb|EDU50143.1| RRM domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 402
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 6/102 (5%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPD-FIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + ++ WW +E D+ G D I+V F E+ NG+SKG + S ++ + +
Sbjct: 117 LMINDVNWWVSEEDIRGWANQSGCEDELIEVSFSEHKVNGKSKGQVFALMNSPQAATALK 176
Query: 132 ERLPTL---ELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSR 168
++ L + H +KP + P N P R + R
Sbjct: 177 HKIENLFKDQAHTKKPTAIFSPPHVNPFKTLPKDVPTRDKGR 218
>gi|24214620|ref|NP_712101.1| RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45657838|ref|YP_001924.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116328465|ref|YP_798185.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116331197|ref|YP_800915.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|359685806|ref|ZP_09255807.1| RNA-binding protein [Leptospira santarosai str. 2000030832]
gi|359726906|ref|ZP_09265602.1| RNA-binding protein [Leptospira weilii str. 2006001855]
gi|386074008|ref|YP_005988325.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|398332637|ref|ZP_10517342.1| RNA-binding protein [Leptospira alexanderi serovar Manhao 3 str. L
60]
gi|410450551|ref|ZP_11304588.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|417760452|ref|ZP_12408475.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|417765544|ref|ZP_12413504.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417775540|ref|ZP_12423393.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|417781669|ref|ZP_12429418.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|417783687|ref|ZP_12431403.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|418668620|ref|ZP_13230020.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418672853|ref|ZP_13234186.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|418684012|ref|ZP_13245203.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418693004|ref|ZP_13254073.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|418696158|ref|ZP_13257167.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|418699596|ref|ZP_13260554.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418704274|ref|ZP_13265152.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418710854|ref|ZP_13271620.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418716814|ref|ZP_13276777.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|418719262|ref|ZP_13278462.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|418726301|ref|ZP_13284912.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|418734639|ref|ZP_13291080.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|418739027|ref|ZP_13295420.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|418744825|ref|ZP_13301171.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|418755775|ref|ZP_13311971.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|421084617|ref|ZP_15545475.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|421094388|ref|ZP_15555106.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|421100627|ref|ZP_15561250.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|421103448|ref|ZP_15564047.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421113326|ref|ZP_15573770.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|421118783|ref|ZP_15579118.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421119714|ref|ZP_15580032.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|421126199|ref|ZP_15586437.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421137268|ref|ZP_15597355.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|422004225|ref|ZP_16351446.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|24195595|gb|AAN49119.1|AE011365_5 RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45601078|gb|AAS70561.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116121209|gb|ABJ79252.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116124886|gb|ABJ76157.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|353457797|gb|AER02342.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|400324233|gb|EJO76531.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400352243|gb|EJP04441.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400357111|gb|EJP13258.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|409943682|gb|EKN89276.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|409953074|gb|EKO07577.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|409955687|gb|EKO14619.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|409960211|gb|EKO23965.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|409963980|gb|EKO31880.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|410009807|gb|EKO67963.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410015637|gb|EKO77732.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|410018482|gb|EKO85320.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410347480|gb|EKO98377.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|410362810|gb|EKP13845.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|410366693|gb|EKP22082.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432901|gb|EKP77254.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|410436289|gb|EKP85407.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410574865|gb|EKQ37894.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|410580163|gb|EKQ47991.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|410744415|gb|EKQ93156.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|410745725|gb|EKQ98635.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410755352|gb|EKR16982.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410761438|gb|EKR27618.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410766007|gb|EKR36696.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410768454|gb|EKR43701.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410772759|gb|EKR52798.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|410778400|gb|EKR63029.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|410787585|gb|EKR81317.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|410794311|gb|EKR92220.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|410796430|gb|EKR98566.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|410801100|gb|EKS07274.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|417257025|gb|EKT86432.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|455666044|gb|EMF31517.1| hypothetical protein LEP1GSC201_1675 [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455791968|gb|EMF43753.1| hypothetical protein LEP1GSC067_3245 [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456821541|gb|EMF70047.1| hypothetical protein LEP1GSC148_0536 [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456861145|gb|EMF79850.1| hypothetical protein LEP1GSC188_1846 [Leptospira weilii serovar
Topaz str. LT2116]
gi|456874070|gb|EMF89395.1| hypothetical protein LEP1GSC005_1881 [Leptospira santarosai str.
ST188]
gi|456887997|gb|EMF99005.1| hypothetical protein LEP1GSC123_3441 [Leptospira borgpetersenii
str. 200701203]
Length = 91
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+Y+GNL + TE D+ A S G + V+ + +G+S+G V + ++E + +
Sbjct: 2 NIYIGNLAYQATEDDLRKAFESFG--EVTSVRIITDKLSGKSRGLAFVEMANKEEGNAAI 59
Query: 132 ERLPTLELHGRKPMV--AYPTRNVLYQFEAQNPLRSRSR 168
+ L ++ GR+ V A P + P +SRSR
Sbjct: 60 DGLNGTQIRGREIKVNEALPKKPF--------PEKSRSR 90
>gi|116193433|ref|XP_001222529.1| hypothetical protein CHGG_06434 [Chaetomium globosum CBS 148.51]
gi|88182347|gb|EAQ89815.1| hypothetical protein CHGG_06434 [Chaetomium globosum CBS 148.51]
Length = 397
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + L WW T+ D+ + +G + + D+ F E+ NG+SKG V S+++ +
Sbjct: 110 LMISELNWWNTDDDIRGWVHQVGCENELKDITFSEHKINGKSKGQAYVEFTSQQAATATK 169
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRS 165
+ +L +P T V+Y NP R+
Sbjct: 170 HHVDSLTNEYSQPGQKRHT--VIYSAPTHNPFRT 201
>gi|399931791|gb|AFP57445.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 144
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T + + DA + G D +D + +G+S+GF V +E + ++
Sbjct: 40 LFVGGLSWGTDDQSLRDAFATFG--DVVDAGVIVDGDSGRSRGFGFVNFSDDECANEAIK 97
Query: 133 RLPTLELHGRKPMVA 147
+ EL GR V+
Sbjct: 98 AMDGQELQGRNIRVS 112
>gi|169780358|ref|XP_001824643.1| RRM domain protein [Aspergillus oryzae RIB40]
gi|238505520|ref|XP_002383982.1| RRM domain protein [Aspergillus flavus NRRL3357]
gi|83773383|dbj|BAE63510.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220690096|gb|EED46446.1| RRM domain protein [Aspergillus flavus NRRL3357]
Length = 400
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + +L WWTT+ D+ +R D + DV F E+ NG+SKG + + ++ +
Sbjct: 114 LLISDLYWWTTDDDIRGWVREADCEDELKDVTFSEHKVNGKSKGQAFIEFTTLQAATATK 173
Query: 132 ERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSR 168
+L + GRK V Y P N P+R ++
Sbjct: 174 HKLESSGTTGRKYSVNYTNPQPNPFRTLPKDAPMRKDNQ 212
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 16/122 (13%)
Query: 21 GEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTW 80
G+ + ++D+ QP PE R + SQ +++ L+VGNL+W
Sbjct: 173 GKQIDGREVNVDISQ--PRQPNPEK--------RAQVFGDSESQPSTT----LFVGNLSW 218
Query: 81 WTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELH 140
TTE + A G D V+ + +G+ KGF V G +E + E + +L
Sbjct: 219 NTTEDGLWTAFGEFG--DVTHVRLPTDQESGKPKGFGYVEFGDQEGATKAYEAMKGKDLD 276
Query: 141 GR 142
GR
Sbjct: 277 GR 278
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A + G + +D K + G+S+GF VT SE+SM +E
Sbjct: 11 FVGGLAWATDDRSLEAAFSTYG--EILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A + G + +D K + G+S+GF VT SE+SM +E
Sbjct: 11 FVGGLAWATDDRSLEAAFSTYG--EILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + A + G ID K + G+S+GF VT SE+SM +E
Sbjct: 11 FVGGLAWATNNETLEQAFANFG--QVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|149924767|ref|ZP_01913111.1| probable nucleic acid-binding protein [Plesiocystis pacifica SIR-1]
gi|149814351|gb|EDM73949.1| probable nucleic acid-binding protein [Plesiocystis pacifica SIR-1]
Length = 155
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 59 SHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSI--GVPDFIDVKFFENASNGQSKGF 116
+ S C L+VG L+W T SD++R + V +D + G S+GF
Sbjct: 64 KEREAGGNSGPPCRLFVGGLSWDTE----SDSLRELFAKVGAVVDAMIVTDRDTGDSRGF 119
Query: 117 CTVTLGSEESMSLVMERLPTLELHGRKPMVAYPT 150
VT+ + + + M+ L EL GR + T
Sbjct: 120 GFVTMANRKDATKAMKELGGTELDGRSIRIDLAT 153
>gi|302791061|ref|XP_002977297.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
gi|300154667|gb|EFJ21301.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
Length = 180
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++G L+W TT+ + A R G I+ K + +S+GF VT EESM +
Sbjct: 7 CFIGGLSWSTTDRSLETAFRPYG--SIIEAKVVFDRETNRSRGFGFVTFEDEESMENAIR 64
Query: 133 RLPTLELHGRKPMVA 147
++ EL GR V+
Sbjct: 65 KMHNQELEGRSITVS 79
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
LYVG+L + TEAD+ G +F+D+ +++ G+SKG+ V E +
Sbjct: 135 MQLYVGSLHFNLTEADIKQVFEPFGDLEFVDL--HRDSTTGRSKGYAFVQYKRPEDAKMA 192
Query: 131 MERLPTLELHGR 142
+E++ EL GR
Sbjct: 193 LEQMDGFELAGR 204
>gi|440796891|gb|ELR17992.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 147
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
L+VG L+W T + + A G + +D K ++ G+S+GF VT S +
Sbjct: 3 AKLFVGGLSWGTDDNSLRSAFEQHG--EVVDAKVIQDRDTGKSRGFGFVTFASADEAEAA 60
Query: 131 MERLPTLELHGRKPMV 146
L EL GR+ V
Sbjct: 61 KNALNQTELDGREIRV 76
>gi|414887732|tpg|DAA63746.1| TPA: hypothetical protein ZEAMMB73_977373 [Zea mays]
Length = 267
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Query: 37 VTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGV 96
V P P G +P R S + +YVGNL W + + + G
Sbjct: 150 VNCGPPPPRDGSAPRAPRGGGGGGGGGSFVDSGN-KVYVGNLAWGVDNSTLENLFSEQG- 207
Query: 97 PDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRK 143
+D K + +G+S+GF VT GS E ++ + L ++L GR+
Sbjct: 208 -QVLDAKVIYDRDSGRSRGFGFVTYGSAEEVNNAISNLDGIDLDGRQ 253
>gi|206901421|ref|YP_002251463.1| RNA-binding region RNP-1 [Dictyoglomus thermophilum H-6-12]
gi|206740524|gb|ACI19582.1| RNA-binding region RNP-1 [Dictyoglomus thermophilum H-6-12]
Length = 96
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL+W TTE D+ G + V+ + + G+SKGF V +EE +++
Sbjct: 5 LYVGNLSWQTTEEDIKGLFG--GEGEIQSVRLITDRNTGRSKGFAFVET-TEEVAQKLID 61
Query: 133 RLPTLELHGRKPMVA 147
E +GRK +V+
Sbjct: 62 SYNGYEFNGRKIVVS 76
>gi|302780311|ref|XP_002971930.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
gi|300160229|gb|EFJ26847.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
Length = 173
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++G L+W TT+ + A R G I+ K + +S+GF VT EESM +
Sbjct: 7 CFIGGLSWSTTDRSLETAFRPYG--SIIEAKVVFDRETNRSRGFGFVTFEDEESMENAIR 64
Query: 133 RLPTLELHGRKPMVA 147
++ EL GR V+
Sbjct: 65 KMHNQELEGRSITVS 79
>gi|224069480|ref|XP_002326357.1| predicted protein [Populus trichocarpa]
gi|222833550|gb|EEE72027.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
S L+VGNL + A ++D +S G + ++VK+ + G+S+GF VT+ + E +
Sbjct: 88 SPDLQLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKY--DKVTGRSRGFGFVTMSTIEEV 145
Query: 128 SLVMERLPTLELHGR 142
++ EL GR
Sbjct: 146 EAASQQFNGYELDGR 160
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
T S +YVGNL+W ++ + R G +D K + +G+SKGF VT S E
Sbjct: 197 TFDSSNRVYVGNLSWNVDDSALESLFREKG--KVMDAKVVYDRDSGRSKGFGFVTYSSAE 254
Query: 126 SMSLVMERLPTLELHGRKPMVA 147
+ ++ L EL GR V+
Sbjct: 255 EVEDAVDSLNGAELDGRAIRVS 276
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 61 HHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVT 120
S A+S +VG L W T + + A G + ++ K + G+S+GF VT
Sbjct: 34 QFSMASSDVEYRCFVGGLAWATDDQALERAFSQYG--EIVETKIINDRETGRSRGFGFVT 91
Query: 121 LGSEESMSLVMERLPTLELHGRKPMV 146
SE+SM +E + L GR V
Sbjct: 92 FASEQSMKDAIEGMNGQNLDGRNITV 117
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL+W TT+ + G + D + G+++GF VT +EE + ++
Sbjct: 4 LYVGNLSWNTTDETLRQTFSEFG--EVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVD 61
Query: 133 RLPTLELHGRKPMV 146
L EL GR+ V
Sbjct: 62 ALNEQELDGRRIRV 75
>gi|401406015|ref|XP_003882457.1| GA11385, related [Neospora caninum Liverpool]
gi|325116872|emb|CBZ52425.1| GA11385, related [Neospora caninum Liverpool]
Length = 564
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
C +YVG+L ++ TE ++ ++ G +D+ +SKGFC V S E+ +
Sbjct: 77 CRIYVGSLDYYLTELEIKSVFQAFGTIVSVDMP----KEGDRSKGFCFVEYASPEAAEMA 132
Query: 131 MERLPTLELHGRKPMVAYPT 150
+ + L GR V PT
Sbjct: 133 LSTMQNFVLKGRTIKVGRPT 152
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L+W T + +++A G + D K + G+S+GF VT +E+SM ++
Sbjct: 9 FVGGLSWGTDDRSLAEAFNKFG--EVTDSKIINDRETGRSRGFGFVTFANEQSMRDAIDE 66
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 67 MNGKELDGRSITV 79
>gi|449486948|ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S ++VG L++ T + +++A G + ++ + + G+S+GF VT G+ E S
Sbjct: 38 SSSKVFVGGLSYGTDDQRLTEAFTKYG--EVVEARVIMDRDTGRSRGFGFVTFGASEDAS 95
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
++ L +L GR+ +Y T
Sbjct: 96 SAIQALDGQDLDGRRIRCSYAT 117
>gi|449439323|ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S ++VG L++ T + +++A G + ++ + + G+S+GF VT G+ E S
Sbjct: 38 SSSKVFVGGLSYGTDDQRLTEAFTKYG--EVVEARVIMDRDTGRSRGFGFVTFGASEDAS 95
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
++ L +L GR+ +Y T
Sbjct: 96 SAIQALDGQDLDGRRIRCSYAT 117
>gi|226532724|ref|NP_001151236.1| RNA binding protein [Zea mays]
gi|195645238|gb|ACG42087.1| RNA binding protein [Zea mays]
Length = 257
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 48 RSPARYRHHRYSHHHSQATSSSHC-NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
R A R + + S C + YVGNL+W E D+ G V+F
Sbjct: 154 RVTATSNKKRKAEFETDPKKSEGCLSAYVGNLSWNVDENDLRGFF---GPSKIASVRFAV 210
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRN 152
+ G S+GFC V +ES+ + + +L GR VAY N
Sbjct: 211 DKRTGGSRGFCHVEFQDDESLEKAIA-MNQSKLQGRPVKVAYSVSN 255
>gi|194697124|gb|ACF82646.1| unknown [Zea mays]
gi|414864467|tpg|DAA43024.1| TPA: RNA binding protein [Zea mays]
Length = 257
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 48 RSPARYRHHRYSHHHSQATSSSHC-NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
R A R + + S C + YVGNL+W E D+ G V+F
Sbjct: 154 RVTATSNKKRKAEFETDPKKSEGCLSAYVGNLSWNVDENDLRGFF---GPSKIASVRFAV 210
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRN 152
+ G S+GFC V +ES+ + + +L GR VAY N
Sbjct: 211 DKRTGGSRGFCHVEFQDDESLEKAIA-MNQSKLQGRPVKVAYSVSN 255
>gi|408392248|gb|EKJ71606.1| hypothetical protein FPSE_08245 [Fusarium pseudograminearum CS3096]
Length = 361
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + L WW T+ D+ R G D I D+ F E+ NG+SKG + S ++ +
Sbjct: 93 LMISELNWWNTDDDIRGWAREAGCEDEIKDITFSEHKVNGKSKGQAYIEFYSPQASTATK 152
Query: 132 ERLPTL----ELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSR 168
R+ + + +K +AY P N P RS+ +
Sbjct: 153 HRIEQILAESQAAQKKVTLAYWNPNINPFKTLPKDAPTRSKDQ 195
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S +YVGNL+W TT+ + DA G +D ++ G+S+GF VT + E
Sbjct: 2 SGAKVYVGNLSWNTTDDTLRDAFMQFG--QVLDSIVMKDRETGRSRGFGFVTFSTAEEAE 59
Query: 129 LVMERLPTLELHGRKPMV 146
+ ++++ L GR V
Sbjct: 60 ISIQQMNEQPLDGRNIRV 77
>gi|237836525|ref|XP_002367560.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211965224|gb|EEB00420.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|221484014|gb|EEE22318.1| hypothetical protein TGGT1_018190 [Toxoplasma gondii GT1]
gi|221505287|gb|EEE30941.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 532
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
C +YVG+L ++ TE ++ ++ G +D+ +SKGFC V S E+ +
Sbjct: 75 CRIYVGSLDYYLTELEIKSVFQAFGTIVSVDMP----KEGDRSKGFCFVEYASPEAAEMA 130
Query: 131 MERLPTLELHGRKPMVAYPT 150
+ + L GR V PT
Sbjct: 131 LSTMQNFVLKGRTIKVGRPT 150
>gi|189239005|ref|XP_974444.2| PREDICTED: similar to tRNA selenocysteine associated protein
(secp43) [Tribolium castaneum]
Length = 299
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
HC L++G+L + TE + A R +G + ++VK N G++ G+C V ++E
Sbjct: 11 HCQLWMGSLEPYMTETFIISAFRKMG-ENPLNVKVMRNKFTGEAAGYCFVHFANDEEAID 69
Query: 130 VMERLPTLELHGRKPMVAYPTRNV 153
M +L + G P+V + N
Sbjct: 70 AMHKLNGKPIPGTTPVVRFRLNNA 93
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A + G + +D K + G+S+GF VT SE+SM +E
Sbjct: 11 FVGGLAWATDDRSLEAAFSTYG--EILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 65 ATSSSH--CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLG 122
S+SH LYVG+L + TE+D+ G +F+D+ + G+SKG+ V
Sbjct: 389 GVSASHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDL--HRDPMTGRSKGYAFVQYK 446
Query: 123 SEESMSLVMERLPTLELHGR 142
E + +E++ EL GR
Sbjct: 447 RSEDARMALEQMEGFELAGR 466
>gi|221055439|ref|XP_002258858.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193808928|emb|CAQ39631.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 287
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 62 HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
H Q SS+ +Y+GNL TE D+ G P IDV + G+SKG+C ++
Sbjct: 29 HDQYKDSSY--IYIGNLDSRLTEGDIVIVFSQFGEP--IDVNLVRDKETGKSKGYCFLSY 84
Query: 122 GSEESMSLVMERLPTLELHGRKPMVA 147
+ S L ++ +L R P+V
Sbjct: 85 EDQRSTVLAVDNFNGYKLLDR-PLVV 109
>gi|194337130|ref|YP_002018924.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309607|gb|ACF44307.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 90
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPD---FIDVKFFENASNGQSKGFCTVTLGSEESMS 128
N+Y+GNL + TE D+ DA G + I+ KF +G+SKGF V + +E
Sbjct: 2 NIYIGNLAYTVTEDDLRDAFSEFGQVESASIINDKF-----SGRSKGFGFVDMPNESEAR 56
Query: 129 LVMERLPTLELHGR-------KPMVAYPTRNVLY 155
+E + +L+GR KP P R Y
Sbjct: 57 EAIESMNEKDLNGRTIKVNEAKPREERPARRDRY 90
>gi|270010282|gb|EFA06730.1| hypothetical protein TcasGA2_TC009661 [Tribolium castaneum]
Length = 294
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
HC L++G+L + TE + A R +G + ++VK N G++ G+C V ++E
Sbjct: 6 HCQLWMGSLEPYMTETFIISAFRKMG-ENPLNVKVMRNKFTGEAAGYCFVHFANDEEAID 64
Query: 130 VMERLPTLELHGRKPMVAYPTRNV 153
M +L + G P+V + N
Sbjct: 65 AMHKLNGKPIPGTTPVVRFRLNNA 88
>gi|308504790|ref|XP_003114578.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
gi|308258760|gb|EFP02713.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
Length = 84
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S S ++YVGN T+ TTE ++ D ++G +V+ + G+ +GF V E
Sbjct: 2 SGSGFSVYVGNATYQTTEQELGDYFSTVG--QVTNVRIVCDRETGRPRGFAFVEFADEAG 59
Query: 127 MSLVMERLPTLELHGRKPMVAYPTR 151
++L ++ +GR+ V TR
Sbjct: 60 AQRACDQLNGVDFNGRQLRVNLATR 84
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S+ LYVGN+++ T+E ++ A G + DV + G+ +GF VT+ + E
Sbjct: 2 SNSKLYVGNMSFKTSEDELRSAFGQFG--NVTDVYVAMDKMTGRPRGFAFVTMSTPEEAK 59
Query: 129 LVMERLPTLELHGR 142
+ E+L ++L GR
Sbjct: 60 IAAEKLNGVDLGGR 73
>gi|164662807|ref|XP_001732525.1| hypothetical protein MGL_0300 [Malassezia globosa CBS 7966]
gi|159106428|gb|EDP45311.1| hypothetical protein MGL_0300 [Malassezia globosa CBS 7966]
Length = 410
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 78 LTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTL 137
L+ TTE D+ D G + V +A G+S+GF +T+ E+ + +E+L +
Sbjct: 139 LSIRTTERDLEDEFARAG--EVEKVVIVYDARTGRSRGFGFITMKDIETATRAIEQLNNV 196
Query: 138 ELHGRKPMVAY 148
ELHGR+ V Y
Sbjct: 197 ELHGRRIRVDY 207
>gi|332027282|gb|EGI67366.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 306
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 24 VSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTT 83
++ + ++ D DDV Q F E G + + + S L+VG L+W TT
Sbjct: 1 MADQQENKDFSDDVAEQNF-EKNGEAESGTGGGGGDAVENGQDSQEDRKLFVGGLSWETT 59
Query: 84 EADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+ ++ + + G + I+VK + + G+S+GF + E++ +M
Sbjct: 60 DKELREHFSTYGDIESINVK--TDPNTGRSRGFAFIVFAKAEALDKIM 105
>gi|544426|sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus carota]
gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A G D D K + G+S+GF VT E+SM +E
Sbjct: 9 FVGGLAWATNDESLEQAFSQFG--DITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEG 66
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 67 MNGQELDGRNITV 79
>gi|6273331|gb|AAF06329.1|AF191305_1 glycine-rich RNA binding protein, partial [Medicago sativa]
Length = 105
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + A G + +D K + G+S+GF VT +E+SM+ V+E
Sbjct: 9 FVGGLAWATDNDALEKAFSQYG--EIVDSKIINDRETGRSRGFGFVTFANEKSMNDVIEA 66
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 67 MNGQDLDGRNITV 79
>gi|115470657|ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113610463|dbj|BAF20841.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|125557292|gb|EAZ02828.1| hypothetical protein OsI_24955 [Oryza sativa Indica Group]
gi|215695203|dbj|BAG90394.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740788|dbj|BAG96944.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 348
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSI--GVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+Y GNL W +DA+R+ G P +D + +G+S+GF V+ + E
Sbjct: 221 KIYAGNLGWGV----RADALRAAFEGQPGLLDARVIFERDSGRSRGFGFVSFRTAEDAQA 276
Query: 130 VMERLPTLELHGR 142
+E L +EL GR
Sbjct: 277 ALEALDGVELEGR 289
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ + +A G + ID K + G+S+GF VT +E++M ++
Sbjct: 10 FVGGLAWATTDQSLQEAFSQYG--EIIDSKIINDRETGRSRGFGFVTFNNEKAMRDAIDG 67
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 68 MNGQDLDGRNITV 80
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
T+S LYVG+L + TE+D+ G +F+D+ + G+SKG+ V E
Sbjct: 217 TASHGAILYVGSLHFNLTESDIKQVFEPFGELEFVDL--HRDPMTGRSKGYAFVQYKRSE 274
Query: 126 SMSLVMERLPTLELHGR 142
+ +E++ EL GR
Sbjct: 275 DARMALEQMEGFELAGR 291
>gi|90704785|dbj|BAE92287.1| putative glycine-rich RNA binding protein [Cryptomeria japonica]
Length = 181
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A++ +VG L+W T + + DA + G + +D K + G+S+GF VT E
Sbjct: 2 ASADVEFRCFVGGLSWSTDDRSLKDAFTAFG--EVMDSKVVSDRETGRSRGFGFVTFMDE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
+SM +E + +L GR V
Sbjct: 60 QSMRDAIEGMNGRDLDGRNITV 81
>gi|427787637|gb|JAA59270.1| Putative transformer 2 alpha log [Rhipicephalus pulchellus]
Length = 267
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S+S C L V L+ +T E D+ + G DV+ +A +G+S+GF V S +
Sbjct: 120 STSRC-LGVFGLSLYTQERDLKEVFSKYGP--LEDVQVVYDAQSGRSRGFAFVYFESVDD 176
Query: 127 MSLVMERLPTLELHGRKPMVAY 148
+ +R LE+ GRK V Y
Sbjct: 177 AKMAKDRCNGLEIDGRKIRVDY 198
>gi|156096969|ref|XP_001614518.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148803392|gb|EDL44791.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 299
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 62 HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
H Q SS+ +Y+GNL TE D+ G P IDV + G+SKG+C ++
Sbjct: 29 HDQYKDSSY--IYIGNLDSRLTEGDIVIVFSQFGEP--IDVNLVRDKETGKSKGYCFLSY 84
Query: 122 GSEESMSLVMERLPTLELHGRKPMVA 147
+ S L ++ +L R P+V
Sbjct: 85 EDQRSTVLAVDNFNGYKLLDR-PLVV 109
>gi|414878515|tpg|DAA55646.1| TPA: hypothetical protein ZEAMMB73_431003 [Zea mays]
Length = 113
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
NL+VG L++ T E + D G D I K + ++G+SKGF V S+ +
Sbjct: 34 NLFVGGLSYDTNETALKDVFSQCG--DVIAAKVICHPTSGKSKGFGFVKFSSQNQADAAL 91
Query: 132 ERLPTLELHGRKPMVAYP 149
+++ L GRK V Y
Sbjct: 92 QKMNGQVLDGRKIRVHYA 109
>gi|417409283|gb|JAA51156.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 279
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 42 FPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFID 101
FP H+ SP H + A +++G L+W TT+ D+ D G + +D
Sbjct: 1 FPSHSNSSP--------RHSEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFG--EVVD 50
Query: 102 VKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+ G+S+GF V ES+ VM++
Sbjct: 51 CTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 82
>gi|125599171|gb|EAZ38747.1| hypothetical protein OsJ_23149 [Oryza sativa Japonica Group]
Length = 220
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSI--GVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+Y GNL W +DA+R+ G P +D + +G+S+GF V+ + E
Sbjct: 93 KIYAGNLGWGV----RADALRAAFEGQPGLLDARVIFERDSGRSRGFGFVSFRTAEDAQA 148
Query: 130 VMERLPTLELHGRKPMVAYPTRN 152
+E L +EL GR ++ +N
Sbjct: 149 ALEALDGVELEGRPLRLSMAEQN 171
>gi|308272084|emb|CBX28692.1| Glycine-rich RNA-binding protein 8 [uncultured Desulfobacterium
sp.]
Length = 127
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL++ E D+ A +G D V + +G+SKGF V + S+ +E
Sbjct: 3 IYVGNLSYEVNEDDLRQAFEQLGKVD--SVSIINDKYSGRSKGFGFVEMSSDAEAQAAIE 60
Query: 133 RLPTLELHGR 142
L EL GR
Sbjct: 61 GLNGKELKGR 70
>gi|404484957|ref|ZP_11020161.1| hypothetical protein HMPREF9448_00570 [Barnesiella intestinihominis
YIT 11860]
gi|404339962|gb|EJZ66393.1| hypothetical protein HMPREF9448_00570 [Barnesiella intestinihominis
YIT 11860]
Length = 81
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+Y+GNL + E D+ + G D VK + +G+SKGF + +E+ +
Sbjct: 2 NIYLGNLNYGVKEQDLQTLLEGFGAID--SVKIIVDRESGRSKGFGFAEMSDDEAAKRAI 59
Query: 132 ERLPTLELHGRKPMV 146
E L E GR ++
Sbjct: 60 EELSGKEFAGRALVI 74
>gi|17064758|gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana]
Length = 329
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
S LYVGNL + T +++S G +DV+ + +S+GF VT+GS E
Sbjct: 111 ASGEEGRLYVGNLPYTITSSELSQIFGEAGT--VVDVQIVYDKVTDRSRGFGFVTMGSIE 168
Query: 126 SMSLVMERLPTLELHGRKPMVAYP 149
M+ + ++ GR V +P
Sbjct: 169 EAKGAMQMFNSSQIGGRTVKVNFP 192
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+Y GNL W T + DA P + K + G+S+GF ++ S E++ +
Sbjct: 221 VYAGNLGWDLTSQGLKDAFGD--QPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALA 278
Query: 133 RLPTLELHGR-----------KPMVAYPT 150
+ +E+ GR KP V+ P+
Sbjct: 279 TMNGVEVEGRALRLNLASEREKPTVSPPS 307
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 52 RYRHHRYSHHHSQATSSSH---CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENA 108
R R H H SSH LYVG+L + TE+D+ G +F+D+ +
Sbjct: 336 RNRTHAGDSLHLPPGVSSHHGGMQLYVGSLHFNLTESDIRQVFEPFGELEFVDL--HRDP 393
Query: 109 SNGQSKGFCTVTLGSEESMSLVMERLPTLELHGR 142
G+SKG+ V E + +E++ EL GR
Sbjct: 394 MTGRSKGYAFVQYKRGEDAKMALEQMEGFELAGR 427
>gi|255014055|ref|ZP_05286181.1| RNA binding protein [Bacteroides sp. 2_1_7]
gi|262382108|ref|ZP_06075246.1| RNA binding protein [Bacteroides sp. 2_1_33B]
gi|301310681|ref|ZP_07216620.1| RNA-binding protein [Bacteroides sp. 20_3]
gi|410101712|ref|ZP_11296640.1| hypothetical protein HMPREF0999_00412 [Parabacteroides sp. D25]
gi|423336932|ref|ZP_17314679.1| hypothetical protein HMPREF1059_00631 [Parabacteroides distasonis
CL09T03C24]
gi|262297285|gb|EEY85215.1| RNA binding protein [Bacteroides sp. 2_1_33B]
gi|300832255|gb|EFK62886.1| RNA-binding protein [Bacteroides sp. 20_3]
gi|409239510|gb|EKN32294.1| hypothetical protein HMPREF0999_00412 [Parabacteroides sp. D25]
gi|409239951|gb|EKN32734.1| hypothetical protein HMPREF1059_00631 [Parabacteroides distasonis
CL09T03C24]
Length = 81
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+Y+GNL++ E+D+ + GV D VK + +SKGF + + + +
Sbjct: 2 NIYIGNLSYRVRESDLQQVLEEYGVVD--SVKLIVDRDTRRSKGFAFAEMPNVDEAQKAI 59
Query: 132 ERLPTLELHGRKPMV--AYPTR 151
E L E GR+ +V A P R
Sbjct: 60 EELNQAEYEGRQMVVKEAIPRR 81
>gi|218262316|ref|ZP_03476830.1| hypothetical protein PRABACTJOHN_02504 [Parabacteroides johnsonii
DSM 18315]
gi|423343074|ref|ZP_17320788.1| hypothetical protein HMPREF1077_02218 [Parabacteroides johnsonii
CL02T12C29]
gi|218223467|gb|EEC96117.1| hypothetical protein PRABACTJOHN_02504 [Parabacteroides johnsonii
DSM 18315]
gi|409216750|gb|EKN09733.1| hypothetical protein HMPREF1077_02218 [Parabacteroides johnsonii
CL02T12C29]
Length = 80
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+YVGNL + E D+ + G + VK ++ G+SKGF V + +E+ +
Sbjct: 2 NIYVGNLNYRVREDDLKQVMEEYGTVE--SVKIIKDRETGKSKGFGFVEMPDDEAAKKAI 59
Query: 132 ERLPTLELHGRKPMV 146
L E GR+ +V
Sbjct: 60 AELNEAEYEGRQMVV 74
>gi|15231200|ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
gi|681910|dbj|BAA06522.1| RNA-binding protein cp33 [Arabidopsis thaliana]
gi|4886289|emb|CAB43448.1| RNA-binding protein cp33 precursor [Arabidopsis thaliana]
gi|14517544|gb|AAK62662.1| AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|18700226|gb|AAL77723.1| AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|21553418|gb|AAM62511.1| RNA-binding protein cp33 [Arabidopsis thaliana]
gi|332645419|gb|AEE78940.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
Length = 329
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
S LYVGNL + T +++S G +DV+ + +S+GF VT+GS E
Sbjct: 111 ASGEEGRLYVGNLPYTITSSELSQIFGEAGT--VVDVQIVYDKVTDRSRGFGFVTMGSIE 168
Query: 126 SMSLVMERLPTLELHGRKPMVAYP 149
M+ + ++ GR V +P
Sbjct: 169 EAKEAMQMFNSSQIGGRTVKVNFP 192
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+Y GNL W T + DA P + K + G+S+GF ++ S E++ +
Sbjct: 221 VYAGNLGWNLTSQGLKDAFGD--QPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALA 278
Query: 133 RLPTLELHGR-----------KPMVAYPT 150
+ +E+ GR KP V+ P+
Sbjct: 279 TMNGVEVEGRALRLNLASEREKPTVSPPS 307
>gi|357167780|ref|XP_003581329.1| PREDICTED: uncharacterized protein LOC100827743 [Brachypodium
distachyon]
Length = 483
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 56 HRYSHHHSQATS--SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQS 113
H+ HH + S ++ LY+ +L WWTT+ ++ A+ G D+ FF + +G+S
Sbjct: 155 HQPPHHIALGASLPTTTLALYIADLPWWTTDEEVEAALEPHGA--LQDLHFFADKFSGRS 212
Query: 114 KGFC 117
+GFC
Sbjct: 213 RGFC 216
>gi|46115998|ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
Length = 1163
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+YVGNL W TT+ + +A + G +D + G+S+GF VT GS + +
Sbjct: 4 KVYVGNLGWNTTDDSLRNAFQDYG--QILDSIVMRDRDTGRSRGFGFVTFGSSQEAETAI 61
Query: 132 ERLPTLELHGRKPMV 146
L EL GR+ V
Sbjct: 62 ISLNEQELDGRRIKV 76
>gi|225464938|ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Vitis
vinifera]
Length = 503
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVG ++ +E D+ S+G + +V+ + +G++KGF VT + E S +E
Sbjct: 126 VYVGGISQDASEEDLKSFCESVG--EVTEVRIMKGKDSGENKGFAFVTFRNVELASKAIE 183
Query: 133 RLPTLELHGRK 143
L E GRK
Sbjct: 184 ELNNTEFKGRK 194
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A LYVG+L + TE D+ G DF+D + G+SKG+ V
Sbjct: 348 APQGGAMQLYVGSLHFNLTEQDIKQVFEPFGELDFVD--LHRDPGTGRSKGYAFVQYKRA 405
Query: 125 ESMSLVMERLPTLELHGR 142
E + +E++ EL GR
Sbjct: 406 EDAKMALEQMDGFELAGR 423
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
+YVGNL+W TT+ + +A G +D + G+S+GF VT SE+
Sbjct: 3 TKVYVGNLSWSTTDDTLREAFSEYG--QVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAA 60
Query: 131 MERLPTLELHGRKPMV 146
+ L +L GR+ V
Sbjct: 61 INSLHEQDLDGRRIKV 76
>gi|297825019|ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
gi|297326231|gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A++ +VG L W T + + A G D +D K + G+S+GF VT E
Sbjct: 2 ASADVEYRCFVGGLAWATDDRALETAFSQYG--DVVDSKIINDRETGRSRGFGFVTFKDE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
+SM +E + EL GR V
Sbjct: 60 KSMKDAIEGMNGQELDGRSITV 81
>gi|168054274|ref|XP_001779557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669038|gb|EDQ55633.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VGN+ W EA M+ G +D K + +G+S+GF VT+ M
Sbjct: 128 KLFVGNIPWGCDEAAMTSLFSPYG--SVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTAM 185
Query: 132 ERLPTLELHGRKPMVAY 148
E L EL GR+ V +
Sbjct: 186 ENLDGTELDGRELRVNF 202
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+YVGNL W A +++ G D ++V + + +G+S+GF VT+ S + ++
Sbjct: 24 KVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIY--DKLSGRSRGFAFVTMASHDDAQALI 81
Query: 132 ERLPTLELHGRKPMVAYP 149
L ++ GR V +P
Sbjct: 82 NALDGSDMGGRALKVNFP 99
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum CS3096]
Length = 128
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL+W TT+ + G + D + G+++GF VT +EE + ++
Sbjct: 4 LYVGNLSWNTTDDTLRQTFSEFG--EVTDSIIMRDRETGRARGFGFVTFSTEEQANAAVD 61
Query: 133 RLPTLELHGRKPMV 146
L EL GR+ V
Sbjct: 62 ALNEQELDGRRIRV 75
>gi|124505047|ref|XP_001351265.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|4494008|emb|CAB39067.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 309
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 62 HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
H Q SS+ +Y+GNL TE D+ G P IDV + G+SKG+C ++
Sbjct: 29 HDQYRDSSY--IYIGNLDNRLTEGDIVIVFSQYGEP--IDVNLVRDNETGKSKGYCFLSY 84
Query: 122 GSEESMSLVMERLPTLELHGRKPMVA 147
+ S L ++ +L R P+V
Sbjct: 85 ADQRSTILAVDNFNGYKLLER-PLVV 109
>gi|799015|emb|CAA89058.1| putative glycine rich RNA binding protein [Solanum tuberosum]
Length = 175
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ +SDA + ++ K + G+S+GF VT E++M +E
Sbjct: 9 FVGGLAWATTDQTLSDAFSQY--AEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 67 MNRQDLDGRNITV 79
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 56 HRYSHHHSQA----TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNG 111
HR S SQA +S ++VG +++ T + + +A G + I+ + + G
Sbjct: 24 HRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLREAFTKYG--EVIEARVIVDRETG 81
Query: 112 QSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYP 149
+S+GF VT S E S ++ L +LHGR+ V Y
Sbjct: 82 RSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYA 119
>gi|70946190|ref|XP_742836.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56522033|emb|CAH76281.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 288
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 62 HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
H Q SS+ +Y+GNL TE D+ G P IDV + G+SKG+C +
Sbjct: 29 HDQYKESSY--IYIGNLDNRLTEGDIVIVFSQFGEP--IDVNLVRDKETGKSKGYCFLAY 84
Query: 122 GSEESMSLVMERLPTLELHGRKPMVA 147
+ S L ++ +L KP+V
Sbjct: 85 EDQRSTILAVDNFNGFKLLD-KPLVV 109
>gi|254576977|ref|XP_002494475.1| ZYRO0A02398p [Zygosaccharomyces rouxii]
gi|238937364|emb|CAR25542.1| ZYRO0A02398p [Zygosaccharomyces rouxii]
Length = 410
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
NL+VG+L+ + + +A RS P FI + G S+G+ V+ G +E L M
Sbjct: 145 NLFVGDLSVDVDDETLCNAFRSF--PSFIQGHVMWDMQTGGSRGYGFVSFGDQEQAQLAM 202
Query: 132 ERLPTLELHGR 142
+ + + EL+GR
Sbjct: 203 DSMQSQELNGR 213
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S +++G +++ T + + +A G + ++ + + G+S+GF VT S E S
Sbjct: 38 SSSKIFIGGISFQTDDNGLKEAFDKYG--NVVEARIIMDRDTGRSRGFGFVTYTSSEEAS 95
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
++ + +LHGR+ V Y T
Sbjct: 96 SAIQAMDGQDLHGRRVRVNYAT 117
>gi|7024451|dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A++ +VG L W TT++ + +A + G D ++ K + G+S+GF VT E
Sbjct: 2 ASADVEFRCFVGGLAWATTDSSLHEAFSAYG--DILESKIINDRETGRSRGFGFVTFRDE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
+SM +E + L GR V
Sbjct: 60 KSMRDAIEGMNGQNLDGRNITV 81
>gi|407004871|gb|EKE21139.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 109
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIG-VPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
LY+GNL + TE D+ + G V ++F +G+SKGF V + +EE+
Sbjct: 4 KLYIGNLLYEITEDDLKEYFGQAGSVASATVIRF----QDGKSKGFAFVEMETEEAAQKA 59
Query: 131 MERLPTLELHGRKPMVA 147
++ L + GRK +VA
Sbjct: 60 IDTLNGQDYKGRKIVVA 76
>gi|366988347|ref|XP_003673940.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
gi|342299803|emb|CCC67559.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
Length = 506
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S C L++G L W TTE + D G + +D+K ++ + G+S+GF +T S
Sbjct: 189 SKECCKLFIGGLNWETTEDKLKDYFSKYG--NVVDLKIMKDNATGRSRGFGFLTFELSSS 246
Query: 127 MSLVMERLPTLELHGRKPMVAYP 149
+ V++ L+ P A P
Sbjct: 247 VDEVVKTQHILDGKVIDPKRAIP 269
>gi|313147072|ref|ZP_07809265.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423277356|ref|ZP_17256270.1| hypothetical protein HMPREF1203_00487 [Bacteroides fragilis HMW
610]
gi|424663466|ref|ZP_18100503.1| hypothetical protein HMPREF1205_03852 [Bacteroides fragilis HMW
616]
gi|313135839|gb|EFR53199.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404577156|gb|EKA81894.1| hypothetical protein HMPREF1205_03852 [Bacteroides fragilis HMW
616]
gi|404587105|gb|EKA91655.1| hypothetical protein HMPREF1203_00487 [Bacteroides fragilis HMW
610]
Length = 81
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+Y+GNL++ EAD+ + G D VK + +SKGF V + +++ V
Sbjct: 1 MNMYIGNLSYRVKEADLRQVMEEYGTVD--SVKLITDRETRKSKGFAFVEMPNDDEAKNV 58
Query: 131 MERLPTLELHGRKPMV 146
+ L E GR+ +V
Sbjct: 59 IAELNGAEYEGRQMVV 74
>gi|115402479|ref|XP_001217316.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189162|gb|EAU30862.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 395
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + +L WWTT+ D+ +R D + DV F E+ NG+SKG V S ++ +
Sbjct: 113 LLISDLFWWTTDDDIRGWVRQADCEDELKDVTFSEHKVNGKSKGQVFVEFTSLQAATATK 172
Query: 132 ERLPTLEL---HGRKPMVAY--PTRNVLYQFEAQNPLRSRSR 168
++ + + GRK V Y P N P+R ++
Sbjct: 173 HKIESFNITGQTGRKHTVTYTSPQPNPFRTLPKDAPIRKDNQ 214
>gi|425780996|gb|EKV18978.1| hypothetical protein PDIG_04750 [Penicillium digitatum PHI26]
gi|425783259|gb|EKV21116.1| hypothetical protein PDIP_09420 [Penicillium digitatum Pd1]
Length = 399
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + +L+WWTT+ D+ + GV + + DV F E+ NG+SKG V + ++ +
Sbjct: 108 LLISDLSWWTTDDDIRGWVNQAGVENQLKDVTFSEHKVNGKSKGQAFVEFSTAKAATATK 167
Query: 132 ERLPTLELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSRRS 170
+ RK V Y P +N P+R+ R
Sbjct: 168 HNIERNGGPARKHTVHYTSPHQNPFKTLPKDAPMRNAGGRG 208
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
+S+ + L+VG +++ T E +SDA G +D + + +G+SKGF VT + E
Sbjct: 39 SSTPNTKLFVGGISYNTDEQSLSDAFSKYG--QVLDARIIMDRESGRSKGFGFVTYNTVE 96
Query: 126 SMSLVMERLPTLELHGRKPMV 146
S ++ L +L+GR+ V
Sbjct: 97 EASSAIQALDGQDLYGRRVGV 117
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 56 HRYSHHHSQA----TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNG 111
HR S SQA +S ++VG +++ T + + +A G + I+ + + G
Sbjct: 24 HRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLREAFTKYG--EVIEARVIVDRETG 81
Query: 112 QSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYP 149
+S+GF VT S E S ++ L +LHGR+ V Y
Sbjct: 82 RSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYA 119
>gi|303272625|ref|XP_003055674.1| RNA binding protein [Micromonas pusilla CCMP1545]
gi|226463648|gb|EEH60926.1| RNA binding protein [Micromonas pusilla CCMP1545]
Length = 310
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYV NL+W + D+ D R G + I K G+SKG V +G+ + + +E
Sbjct: 45 LYVHNLSWRVSWQDLKDHFRQAG--EVIHAKIMTEGPGGRSKGCGIVEMGTVDEAANAIE 102
Query: 133 RLPTLELHGRKPMV 146
L +L+GR ++
Sbjct: 103 MLNDTDLNGRNILI 116
>gi|326507732|dbj|BAJ86609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 100
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S LYVGNL+W + + + G +D K + +G+S+GF VT GS + ++
Sbjct: 12 SANKLYVGNLSWGVDNSTLENLFSEQG--KVLDAKVIYDRDSGRSRGFGFVTYGSADEVN 69
Query: 129 LVMERLPTLELHGRKPMV 146
+ L ++L GR+ V
Sbjct: 70 NAISNLDGVDLDGRQIRV 87
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S ++VG +++ T + + +A G + I+ + + G+S+GF VT S E S
Sbjct: 38 SSSKVFVGGISYQTDDTSLREAFGKYG--EVIEARVIIDRETGRSRGFAFVTYTSSEEAS 95
Query: 129 LVMERLPTLELHGRKPMVAYP 149
++ L +LHGR+ V Y
Sbjct: 96 SAIQALDGQDLHGRRVRVNYA 116
>gi|357114300|ref|XP_003558938.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 255
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
YVGNL+W TE D+ D +S + V+F + G S+GF + +ES+ +
Sbjct: 179 YVGNLSWNVTEKDLRDFFKSSRIA---SVRFAIDKRTGDSRGFGHIDFEDDESLEKAVG- 234
Query: 134 LPTLELHGRKPMVAYPTRN 152
+ EL GR +AY N
Sbjct: 235 MNQSELRGRPVKIAYAISN 253
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 17/110 (15%)
Query: 66 TSSSHCN------LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTV 119
TS H N LYVGN+ + TE D+ + G +F+ + + NG+S+G+ V
Sbjct: 271 TSGHHPNSIPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQL---QKDDNGRSRGYGFV 327
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMVAY--------PTRNVLYQFEAQN 161
+E++ +L GR V T N+L +F+ QN
Sbjct: 328 QFRDAGQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQN 377
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 17/110 (15%)
Query: 66 TSSSHCN------LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTV 119
TS H N LYVGN+ + TE D+ + G +F+ + + NG+S+G+ V
Sbjct: 270 TSGHHPNSIPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQL---QKDDNGRSRGYGFV 326
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMVAY--------PTRNVLYQFEAQN 161
+E++ +L GR V T N+L +F+ QN
Sbjct: 327 QFRDAGQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQN 376
>gi|406907930|gb|EKD48603.1| RNA-binding protein [uncultured bacterium]
Length = 100
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+YVGNL + TE + + G D K + +G+SKGF V + ++E
Sbjct: 1 MNIYVGNLPYSITEDSLRELFEQFG--DVSSTKVVVDQISGRSKGFAFVDMSNDEEGEAA 58
Query: 131 MERLPTLELHGRKPMV 146
+E+L EL GR +V
Sbjct: 59 IEKLNGHELDGRTIVV 74
>gi|170029244|ref|XP_001842503.1| RNA-binding post-transcriptional regulator csx1 [Culex
quinquefasciatus]
gi|167881606|gb|EDS44989.1| RNA-binding post-transcriptional regulator csx1 [Culex
quinquefasciatus]
Length = 326
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
SS C L++G+L + TEA + A R +G D VK N G G+C V+ ++++
Sbjct: 2 SSIQCQLWMGSLESYMTEAFILAAFRKMG-EDPSTVKLMRNKYTGDPAGYCFVSFKTDDA 60
Query: 127 MSLVMERLPTLELHGRKPMVAY 148
M +L + G P+V +
Sbjct: 61 ALDAMHKLNGKPIPGTNPLVRF 82
>gi|681912|dbj|BAA06523.1| RNA-binding protein cp33 [Arabidopsis thaliana]
Length = 321
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL + T +++S G +DV+ + +S+GF VT+GS E M+
Sbjct: 110 LYVGNLPYTITSSELSQIFGEAGT--VVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQ 167
Query: 133 RLPTLELHGRKPMVAYP 149
+ ++ GR V +P
Sbjct: 168 MFNSSQIGGRTVKVNFP 184
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+Y GNL W T + DA P + K + G+S+GF ++ S E++ +
Sbjct: 213 VYAGNLGWNLTSQGLKDAFGD--QPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALA 270
Query: 133 RLPTLELHGR-----------KPMVAYPT 150
+ +E+ GR KP V+ P+
Sbjct: 271 TMNGVEVEGRALRLNLASEREKPTVSPPS 299
>gi|254579563|ref|XP_002495767.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
gi|238938658|emb|CAR26834.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
Length = 543
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
C +++G L W TTE + D G ID+K ++ + G+S+GF +T S S+ V
Sbjct: 159 CKMFIGGLNWETTEDTLRDYFSKYGR--VIDLKIMKDTNTGRSRGFGFLTFDSSSSVDEV 216
Query: 131 MERLPTLELHGRKPMVAYP 149
++ L+ P A P
Sbjct: 217 VKTQHILDGKVIDPKRAIP 235
>gi|88911212|gb|ABD58896.1| chloroplast single strand DNA binding protein [Mesostigma viride]
Length = 299
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 62 HSQATS-SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVT 120
QATS ++ LYVGNL W + ++ A G +V + +G+S+GF VT
Sbjct: 80 QDQATSTAASTKLYVGNLAWSCDDEMLNQAFSQFGEVKAAEVVL--DRESGRSRGFAFVT 137
Query: 121 LGSEESMSLVMERLPTLELHGRKPMVAYP 149
+ S ++ L EL GR V +P
Sbjct: 138 MASPDAAEKARRGLDGTELAGRAIRVNFP 166
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL W + + D G ++ V + +G+S+GF V L + E + M
Sbjct: 206 LYVGNLPWSMDDGMLEDLFMEFGTVNYARVVM--DRDSGRSRGFAFVALSTPEEANEAMA 263
Query: 133 RLPTLELHGRKPMVAYPTRN 152
L E+ GR V T++
Sbjct: 264 NLDGEEIGGRTIRVNLATKS 283
>gi|196234692|ref|ZP_03133505.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196221240|gb|EDY15797.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 126
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVGNL++ TTE D+ DA G +V ++ G+S+GF VT+ + + +
Sbjct: 4 KLYVGNLSFDTTEVDLQDAFAEAGTVQ--EVALMQDKFTGRSRGFAFVTMATPDEAQKAI 61
Query: 132 ERLPTLELHGR 142
L GR
Sbjct: 62 SIFHGKTLQGR 72
>gi|154494359|ref|ZP_02033679.1| hypothetical protein PARMER_03714 [Parabacteroides merdae ATCC
43184]
gi|423346931|ref|ZP_17324618.1| hypothetical protein HMPREF1060_02290 [Parabacteroides merdae
CL03T12C32]
gi|423725455|ref|ZP_17699592.1| hypothetical protein HMPREF1078_03481 [Parabacteroides merdae
CL09T00C40]
gi|154085803|gb|EDN84848.1| hypothetical protein PARMER_03714 [Parabacteroides merdae ATCC
43184]
gi|409218592|gb|EKN11560.1| hypothetical protein HMPREF1060_02290 [Parabacteroides merdae
CL03T12C32]
gi|409234579|gb|EKN27407.1| hypothetical protein HMPREF1078_03481 [Parabacteroides merdae
CL09T00C40]
Length = 80
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+YVGNL + E D+ + G + VK ++ G+SKGF V + +E+ +
Sbjct: 2 NIYVGNLNYRVREDDLKQVMEEYGTVE--SVKIIKDRETGKSKGFGFVEMPDDEAAKKAI 59
Query: 132 ERLPTLELHGRKPMV 146
L E GR+ ++
Sbjct: 60 AELNEAEYEGRQIVI 74
>gi|90265701|dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+VG L W T + + A G + D K + G+S+GF VT S ESM +E
Sbjct: 7 CFVGGLAWATNDQSLEQAFSQFG--EITDCKIINDRETGRSRGFGFVTFSSSESMKNAIE 64
Query: 133 RLPTLELHGRKPMV 146
+ +L GR V
Sbjct: 65 GMNGQDLDGRNITV 78
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVG+L + TE+D+ G +F+D+ +A G+SKG+ V E + ++
Sbjct: 339 LYVGSLHFNLTESDIKQVFEVFGELEFVDL--HRDAMTGRSKGYAFVQYKRAEDARMALQ 396
Query: 133 RLPTLELHGR 142
++ EL GR
Sbjct: 397 QMEGFELAGR 406
>gi|209877655|ref|XP_002140269.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555875|gb|EEA05920.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 207
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 62 HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
HS +S++ +Y+G L + TE D+ G P IDV + G+SKGFC +
Sbjct: 30 HSTYRNSAY--IYIGGLNYGLTEGDIVIVFSQWGEP--IDVNLIRDPKTGKSKGFCFLAY 85
Query: 122 GSEESMSLVMERLPTLELHGRKPMV 146
++S L ++ + L G K V
Sbjct: 86 EDQQSTILAVDNANDMILLGNKLKV 110
>gi|322792842|gb|EFZ16675.1| hypothetical protein SINV_08972 [Solenopsis invicta]
Length = 335
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 26 TEHDDIDLYDDVTLQPFPEHTGR-------SPARYRHHRYSHHHSQATSSSHCN--LYVG 76
+ ++ D DD+ Q F E G S A +A+ S + L+VG
Sbjct: 2 ADQENKDFSDDIAEQNFAEQNGEAENNGDNSIADNNQESQEDRSVRASQDSLNDRKLFVG 61
Query: 77 NLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+W TT+ ++ + + G + I+VK + + G+S+GF + ES+ +M
Sbjct: 62 GLSWETTDKELREHFSAYGDIESINVK--TDPNTGRSRGFAFIVFAKAESLDKIM 114
>gi|387861095|gb|AFK08577.1| glycine-rich RNA binding protein 2b [Camelina sativa]
gi|387861101|gb|AFK08580.1| glycine-rich RNA binding protein 2b [Camelina sativa]
Length = 156
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T +A + DA G + +D K + G+S+GF V E + S +
Sbjct: 38 LFVGGLSWGTDDASLRDAFAHFG--EVVDAKVIVDRETGRSRGFGFVNFSDETAASAAIS 95
Query: 133 RLPTLELHGRKPMV 146
+ +L+GR V
Sbjct: 96 EMDGKDLNGRNIRV 109
>gi|296084906|emb|CBI28315.3| unnamed protein product [Vitis vinifera]
Length = 434
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVG ++ +E D+ S+G + +V+ + +G++KGF VT + E S +E
Sbjct: 57 VYVGGISQDASEEDLKSFCESVG--EVTEVRIMKGKDSGENKGFAFVTFRNVELASKAIE 114
Query: 133 RLPTLELHGRK 143
L E GRK
Sbjct: 115 ELNNTEFKGRK 125
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
+S+ L++G +++ T E + +A G + +D + + G+S+GF +T S E
Sbjct: 37 SSAPSTKLFIGGVSYSTDEQSLREAFSKYG--EVVDARIIMDRETGRSRGFGFITYTSVE 94
Query: 126 SMSLVMERLPTLELHGRKPMVAY 148
S ++ L +LHGR V Y
Sbjct: 95 EASSAIQALDGQDLHGRPIRVNY 117
>gi|241655012|ref|XP_002411352.1| transformer-2 protein C, putative [Ixodes scapularis]
gi|215503982|gb|EEC13476.1| transformer-2 protein C, putative [Ixodes scapularis]
Length = 258
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Query: 48 RSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFEN 107
RSP R S ++S C L V L+ +T E D+ + G DV+ +
Sbjct: 83 RSPMSNRRRHIGSRVSDNPNASRC-LGVFGLSLYTQERDLKEVFSKYG--PLEDVQVVYD 139
Query: 108 ASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
A +G+S+GF V + E +R LE+ GRK V Y
Sbjct: 140 AQSGRSRGFSFVYFENVEDAKAAKDRCNGLEIDGRKIRVDY 180
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 17/110 (15%)
Query: 66 TSSSHCN------LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTV 119
TS H N LYVGN+ + TE D+ + G +F+ + + NG+S+G+ V
Sbjct: 271 TSGHHPNSIPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQL---QKDDNGRSRGYGFV 327
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMVAY--------PTRNVLYQFEAQN 161
+E++ +L GR V T N+L +F+ QN
Sbjct: 328 QFRDAGQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQN 377
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGN+ + E+D+ D G +F+ + + G+SKG+ V + + +E
Sbjct: 313 LYVGNIHFSIEESDLRDVFEPFGELEFVQL---QKEDTGRSKGYGFVQFAKSDEAKIALE 369
Query: 133 RLPTLELHGR 142
++ E+ GR
Sbjct: 370 KMNGFEVAGR 379
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 17/110 (15%)
Query: 66 TSSSHCN------LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTV 119
TS H N LYVGN+ + TE D+ + G +F+ + + NG+S+G+ V
Sbjct: 271 TSGHHPNSIPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQL---QKDDNGRSRGYGFV 327
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMVAY--------PTRNVLYQFEAQN 161
+E++ +L GR V T N+L +F+ QN
Sbjct: 328 QFRDAGQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQN 377
>gi|426195272|gb|EKV45202.1| hypothetical protein AGABI2DRAFT_120172 [Agaricus bisporus var.
bisporus H97]
Length = 853
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A+SSS NL+VGNL + D+ D R G DV +G+S+GF TV +E
Sbjct: 206 ASSSSCRNLFVGNLPFHCQWQDLKDLFRQAGTIMRADVAL---GPDGRSRGFGTVVFATE 262
Query: 125 ESMSLVMERLPTLELHGR 142
+ ++ E +GR
Sbjct: 263 QDAERAVKMFNGYEYNGR 280
>gi|297267715|ref|XP_001082435.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 [Macaca mulatta]
Length = 455
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 76/186 (40%), Gaps = 44/186 (23%)
Query: 1 MDLYDDAILGMGPTDTNTSPGEHVSTEHDDIDLYDDV---TLQPFPEHTGRS----PARY 53
+D+Y D P NT D IDLYDDV T QP + + + P R
Sbjct: 8 IDIYADEEFNQDPEFNNT----------DQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 54 RHHRYSHHHSQATSSSHCNL-------YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFE 106
++ + A ++ L YVG+ +W S+G + V + E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWV-----------SVGNQKCLWVGWRE 106
Query: 107 NASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSR 166
S G+ + V + SE S+ ++E LP L+G K V TR L QFEAQ +R
Sbjct: 107 --STGR---YAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQ----AR 157
Query: 167 SRRSYR 172
R R
Sbjct: 158 KRECVR 163
>gi|223940412|ref|ZP_03632265.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223890907|gb|EEF57415.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 118
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
L+VGNL + TTE D+ D G I V ++ + G+S+GF + +GS+
Sbjct: 3 TKLFVGNLPFSTTENDLQDHFSGAGT--VIAVNIMQDRATGRSRGFAFIEMGSQAEADAA 60
Query: 131 MERLPTLELHGRKPMV 146
+ + E GR V
Sbjct: 61 VAQYHGKEFQGRALTV 76
>gi|50308683|ref|XP_454345.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643480|emb|CAG99432.1| KLLA0E08779p [Kluyveromyces lactis]
Length = 475
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 58 YSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFC 117
++ Q S NL+VG+L +A ++ + P FI + +G+S+G+
Sbjct: 171 WAFQSQQVNSDETFNLFVGDLNVDVDDATLAGTFKEF--PSFIQAHVMWDMQSGRSRGYG 228
Query: 118 TVTLGSEESMSLVMERLPTLELHGRKPMVAYPTR 151
V+ G ++ + ME EL+GR + + ++
Sbjct: 229 FVSFGEQDQAQVAMETKQGFELNGRALRINWASK 262
>gi|45201486|ref|NP_987056.1| AGR390Cp [Ashbya gossypii ATCC 10895]
gi|44986420|gb|AAS54880.1| AGR390Cp [Ashbya gossypii ATCC 10895]
gi|374110307|gb|AEY99212.1| FAGR390Cp [Ashbya gossypii FDAG1]
Length = 378
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Query: 58 YSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFC 117
++ Q +S NL+VG+L + +S + P FI + +G+S+G+
Sbjct: 109 WAFQSQQVSSDDTFNLFVGDLNVDVDDETLSSTFKEF--PTFIQAHVMWDMQSGRSRGYG 166
Query: 118 TVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRS 170
V+ G +E M+ L+GR V + + E+Q+ R RS R
Sbjct: 167 FVSFGEQEEAQKAMDAKQGFNLNGRAIRVNWAAKR-----ESQHAARPRSNRG 214
>gi|297802026|ref|XP_002868897.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
gi|297314733|gb|EFH45156.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
Length = 164
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + D+ G D +D K + G+S+GF VT E++M +E
Sbjct: 9 FVGGLAWATQDHDLERTFSQFG--DVLDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 67 MNGKELDGRTITV 79
>gi|1009363|dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
Length = 144
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VG L+W T + + DA + G D +D + + +G+S+GF V +E + +
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFG--DVVDARVIVDRDSGRSRGFGFVNFSDDECANEAI 96
Query: 132 ERLPTLELHGRKPMV 146
+ + EL GR V
Sbjct: 97 KAMDGQELQGRNIRV 111
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVG+L + TE+D+ G +F+D+ +A G+SKG+ V E + ++
Sbjct: 339 LYVGSLHFNLTESDIKQVFEVFGELEFVDL--HRDAMTGRSKGYAFVQYKRAEDARMALQ 396
Query: 133 RLPTLELHGR 142
++ EL GR
Sbjct: 397 QMEGFELAGR 406
>gi|440796160|gb|ELR17269.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1122
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
++VG L EAD+ A ++G + +++ ++A+ G+SKG+ V S + L
Sbjct: 401 SEVFVGGLGKDVNEADLYSAFANVG--EIFEIRLMKDATTGESKGYAFVRFTSPKFAKLA 458
Query: 131 MERLPTLELHGRK 143
++++ L GRK
Sbjct: 459 VQQVDGAVLKGRK 471
>gi|150007319|ref|YP_001302062.1| RNA binding protein [Parabacteroides distasonis ATCC 8503]
gi|256839608|ref|ZP_05545117.1| RNA binding protein [Parabacteroides sp. D13]
gi|298375305|ref|ZP_06985262.1| RNA-binding protein [Bacteroides sp. 3_1_19]
gi|423332150|ref|ZP_17309934.1| hypothetical protein HMPREF1075_01947 [Parabacteroides distasonis
CL03T12C09]
gi|149935743|gb|ABR42440.1| RNA binding protein [Parabacteroides distasonis ATCC 8503]
gi|256738538|gb|EEU51863.1| RNA binding protein [Parabacteroides sp. D13]
gi|298267805|gb|EFI09461.1| RNA-binding protein [Bacteroides sp. 3_1_19]
gi|409229991|gb|EKN22863.1| hypothetical protein HMPREF1075_01947 [Parabacteroides distasonis
CL03T12C09]
Length = 81
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+Y+GNL++ E+D+ + G+ D VK + +SKGF + + +
Sbjct: 1 MNIYIGNLSYRVRESDLQQVLEEYGIVD--SVKLIVDRDTRRSKGFAFAEMPNVDEAQKA 58
Query: 131 MERLPTLELHGRKPMV--AYPTR 151
+E L E GR+ +V A P R
Sbjct: 59 IEELNQAEYEGRQMVVKEAIPRR 81
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ +S+A G + ++ K + G+S+GF VT E+SM +E
Sbjct: 11 FVGGLAWATTDQSLSEAFSQYG--EILESKIINDRETGRSRGFGFVTFKDEQSMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ L GR V
Sbjct: 69 MNGQTLDGRNITV 81
>gi|409076926|gb|EKM77294.1| hypothetical protein AGABI1DRAFT_130386 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 853
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A+SSS NL+VGNL + D+ D R G DV +G+S+GF TV +E
Sbjct: 206 ASSSSCRNLFVGNLPFHCQWQDLKDLFRQAGTIMRADVAL---GPDGRSRGFGTVVFATE 262
Query: 125 ESMSLVMERLPTLELHGR 142
+ ++ E +GR
Sbjct: 263 QDAERAVKMFNGYEYNGR 280
>gi|444314863|ref|XP_004178089.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
gi|387511128|emb|CCH58570.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
Length = 472
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S C +++G L W TTE + G + IDVK + NG+S+GF +T + S
Sbjct: 146 SKDSCKMFIGGLNWDTTEDVLRQYFNKYG--NVIDVKIMTDGHNGKSRGFGFLTFENSSS 203
Query: 127 MSLVMERLPTLELHGRKPMVAYP 149
+ V++ L+ P A P
Sbjct: 204 VDEVVKTQHILDGKVIDPKRAIP 226
>gi|4544401|gb|AAD22311.1| putative glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 185
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+VG L W T E + G + D K + G+SKGF VT E+SM ++
Sbjct: 46 CFVGGLAWATDEQSIERCFNEFG--EVFDSKIIIDRETGRSKGFRFVTFKDEDSMRTAID 103
Query: 133 RLPTLELHGR 142
R+ EL GR
Sbjct: 104 RMNGQELDGR 113
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 64 QATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGS 123
Q + + ++G L W T++ + DA G ++ K + +G+S+GF VT
Sbjct: 222 QMSDTDEFRCFIGGLAWSTSDRRLKDAFEKYG--KLVEAKVVVDKFSGRSRGFGFVTFDD 279
Query: 124 EESMSLVMERLPTLELHGRKPMV 146
+E+M +E + ++L GR V
Sbjct: 280 KEAMEEAIEAMNGIDLDGRTITV 302
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L+VG L++ T E + DA G + ++ + + +G+S+GF +T S E S
Sbjct: 30 SSSKLFVGGLSFATDETTLKDAFSEFG--NVLEARIIIDRESGRSRGFGFITFTSTEEAS 87
Query: 129 LVMERLPTLELHGRKPMV 146
M + EL GR V
Sbjct: 88 AAMTSMDGKELQGRNIRV 105
>gi|156554677|ref|XP_001600539.1| PREDICTED: RNA-binding protein squid-like [Nasonia vitripennis]
Length = 338
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Query: 26 TEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSH-HHSQATSSSHCN--------LYVG 76
TE ++ D +DV Q F ++ + SQ S+ N L+VG
Sbjct: 2 TEQENKDFSEDVAEQNFEQNGEAENGGGGGDATENGQESQEDRSAQGNQDSLNDRKLFVG 61
Query: 77 NLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+W TT+ ++ D + G + I+VK + + G+S+GF + ES+ M
Sbjct: 62 GLSWETTDKELRDHFSTFGDIESINVK--TDPTTGRSRGFAFIVFAKAESLDKAM 114
>gi|212722336|ref|NP_001132163.1| uncharacterized protein LOC100193584 [Zea mays]
gi|194693616|gb|ACF80892.1| unknown [Zea mays]
Length = 234
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L G L W T+ + +A S G + +D K + G+S+GF VT SE SM +E
Sbjct: 85 LPSGGLAWATSNESLENAFASYG--EILDSKVITDRETGRSRGFGFVTFSSENSMLDAIE 142
Query: 133 RLPTLELHGRKPMV 146
+ EL GR V
Sbjct: 143 NMNGKELDGRNITV 156
>gi|336389603|gb|EGO30746.1| hypothetical protein SERLADRAFT_455043 [Serpula lacrymans var.
lacrymans S7.9]
Length = 583
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
LYVG+L + TE+D+ G +F+D+ + G+SKG+ V E +
Sbjct: 358 MQLYVGSLHFNLTESDIKQVFEPFGELEFVDL--HRDPMTGRSKGYAFVQYKRAEDARMA 415
Query: 131 MERLPTLELHGR 142
+E++ EL GR
Sbjct: 416 LEQMEGFELAGR 427
>gi|336376609|gb|EGO04944.1| hypothetical protein SERLA73DRAFT_174031 [Serpula lacrymans var.
lacrymans S7.3]
Length = 583
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
LYVG+L + TE+D+ G +F+D+ + G+SKG+ V E +
Sbjct: 358 MQLYVGSLHFNLTESDIKQVFEPFGELEFVDL--HRDPMTGRSKGYAFVQYKRAEDARMA 415
Query: 131 MERLPTLELHGR 142
+E++ EL GR
Sbjct: 416 LEQMEGFELAGR 427
>gi|255573485|ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532973|gb|EEF34739.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 278
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYV NL W + D+ + G DV+ + NG+S+GF VTL S E +
Sbjct: 84 KLYVFNLPWSLSVVDIKNLFGQCGT--VTDVEIIKQ-KNGRSRGFAFVTLASGEEAQAAI 140
Query: 132 ERLPTLELHGRKPMVAYPTR 151
++L + E+ GR V + R
Sbjct: 141 DKLDSHEVSGRIIRVEFAKR 160
>gi|68069647|ref|XP_676735.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56496565|emb|CAH99460.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 189
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 62 HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
H Q SS+ +Y+GNL TE D+ G P IDV + G+SKG+C +
Sbjct: 29 HDQYKESSY--IYIGNLDTRLTEGDIVIVFSQFGEP--IDVNLVRDKETGKSKGYCFLAY 84
Query: 122 GSEESMSLVMERLPTLELHGRKPMVA 147
+ S L ++ +L KP+V
Sbjct: 85 EDQRSTILAVDNFNGFKLLD-KPLVV 109
>gi|213515188|ref|NP_001133716.1| transformer-2 protein homolog beta [Salmo salar]
gi|209155068|gb|ACI33766.1| Splicing factor, arginine/serine-rich 10 [Salmo salar]
Length = 302
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H ++A +C L V L+ +TTE D+ D G DV + + +S+G
Sbjct: 105 NRRRHIGNRANPDPNCCLGVFGLSLYTTERDLRDVFSKYGP--LADVSIVYDQQSRRSRG 162
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V E + ER +EL GR+ V +
Sbjct: 163 FAFVYFEVREDANGAKERANGMELDGRRIRVDF 195
>gi|469070|dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 156
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ + +A G + +D K + G+S+GF VT E++M +E
Sbjct: 9 FVGGLAWATTDQTLGEAFSQFG--EILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEG 66
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 67 MNGQDLDGRNITV 79
>gi|389583407|dbj|GAB66142.1| RNA-binding protein [Plasmodium cynomolgi strain B]
Length = 208
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 62 HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
H Q SS+ +Y+GNL TE D+ G P IDV + G+SKG+C ++
Sbjct: 29 HDQYKDSSY--IYIGNLDSRLTEGDIVIVFSQFGEP--IDVNLVRDKETGKSKGYCFLSY 84
Query: 122 GSEESMSLVMERLPTLELHGRKPMVA 147
+ S L ++ +L R P+V
Sbjct: 85 EDQRSTVLAVDNFNGYKLLDR-PLVV 109
>gi|345887600|ref|ZP_08838771.1| hypothetical protein HMPREF0178_01545 [Bilophila sp. 4_1_30]
gi|345041635|gb|EGW45774.1| hypothetical protein HMPREF0178_01545 [Bilophila sp. 4_1_30]
Length = 106
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 54 RHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQS 113
RHH + H + + +LYVGNL W TE D+ D G + VK + G++
Sbjct: 3 RHHVFLFLHKVSFFMTK-SLYVGNLPWSATEDDVRDLFAPYG--EVTSVKLVSDRETGRA 59
Query: 114 KGFCTVTLGSEESMSLVMERLPTLELHGRKPMV 146
+GF V + S E + +E L GR V
Sbjct: 60 RGFGFVEMAS-EGVQAAVEALDNFSFSGRNLKV 91
>gi|326510421|dbj|BAJ87427.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510771|dbj|BAJ91733.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S LYVGNL+W + + + G +D K + +G+S+GF VT GS + ++
Sbjct: 190 SANKLYVGNLSWGVDNSTLENLFSEQG--KVLDAKVIYDRDSGRSRGFGFVTYGSADEVN 247
Query: 129 LVMERLPTLELHGRKPMV 146
+ L ++L GR+ V
Sbjct: 248 NAISNLDGVDLDGRQIRV 265
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 63 SQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLG 122
S+A S ++VGNL + A ++ G + ++V + + G+S+GF VT+G
Sbjct: 79 SEAEYSEDLKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVY--DRMTGRSRGFGFVTMG 136
Query: 123 SEESMSLVMERLPTLELHGR 142
S E ++ +E+ GR
Sbjct: 137 SVEEVAAAVEQFNGYTFQGR 156
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L+VG L++ T E + DA G + ++ + + +G+S+GF +T S E S
Sbjct: 30 SSSKLFVGGLSFATDETTLKDAFSEFG--NVLEARIIIDRESGRSRGFGFITFTSTEEAS 87
Query: 129 LVMERLPTLELHGRKPMV 146
M + EL GR V
Sbjct: 88 AAMTSMDGKELQGRNIRV 105
>gi|388858327|emb|CCF48115.1| related to glycine-rich RNA-binding protein [Ustilago hordei]
Length = 193
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIG-VPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+YVGNL+W TT+ ++ A + G + D+I +K E G+S+GF VT ++
Sbjct: 3 AKVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRE---TGRSRGFGFVTFATQGEADA 59
Query: 130 VMERLPTLELHGRKPMV 146
+ L EL GR+ V
Sbjct: 60 AIAALNEQELDGRRIRV 76
>gi|255574887|ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 285
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+ LY GNL + A ++ I+ G P+ ++V + + G+S+GF VT+ + E +
Sbjct: 112 NTKLYFGNLPYNVDSAQLAGIIQDYGTPELVEVLY--DRDTGRSRGFAFVTMSTVEDCNA 169
Query: 130 VMERLPTLELHGR 142
V+E L + GR
Sbjct: 170 VIENLDGSQFMGR 182
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VGNL+W T + +A + G + + + + G+S+G+ V + M +
Sbjct: 205 KLFVGNLSWSVTSESLVEAFQEYG--NIVGARVLYDGETGRSRGYGFVCYATRSEMENAL 262
Query: 132 ERLPTLELHGRKPMVA 147
L +EL GR V+
Sbjct: 263 VSLNGVELEGRAMRVS 278
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W TT+ +S+A G + ++ K + G+S+GF VT E++M +E
Sbjct: 9 FVGGLAWATTDNTLSEAFSQYG--EVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 67 MNGQDLDGRNITV 79
>gi|224099981|ref|XP_002311696.1| predicted protein [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus trichocarpa]
gi|222851516|gb|EEE89063.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L++GNL+W T ++ A + G + + + + G+S+G+ V ++E + +
Sbjct: 199 KLFIGNLSWSVTSESLTQAFQEYG--NVVGARVLYDGETGKSRGYGFVCYSTKEELETAL 256
Query: 132 ERLPTLELHGR 142
+ L +EL GR
Sbjct: 257 QSLNGVELEGR 267
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LY GNL + A ++ I+ G P+ ++V + + G+S+GF VT+ S E V+
Sbjct: 108 KLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLY--HRETGRSRGFAFVTMSSIEDCETVI 165
Query: 132 ERLPTLELHGR 142
E L + GR
Sbjct: 166 ENLDGSQYMGR 176
>gi|398337153|ref|ZP_10521858.1| RNA-binding protein [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
gi|398339344|ref|ZP_10524047.1| RNA-binding protein [Leptospira kirschneri serovar Bim str. 1051]
gi|418679408|ref|ZP_13240671.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418686673|ref|ZP_13247838.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418742090|ref|ZP_13298463.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421090342|ref|ZP_15551136.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|421107449|ref|ZP_15568001.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|421132619|ref|ZP_15592785.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|400320299|gb|EJO68170.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410000920|gb|EKO51546.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|410007465|gb|EKO61175.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|410356002|gb|EKP03377.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|410738744|gb|EKQ83477.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410750448|gb|EKR07428.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 91
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+Y+GNL + TE D+ A S G + V+ + +G+S+G V + +++ + +
Sbjct: 2 NIYIGNLAYQATEDDLRKAFESFG--EVTSVRIITDKLSGKSRGLAFVEMANKDEGNAAI 59
Query: 132 ERLPTLELHGRKPMV--AYPTRNVLYQFEAQNPLRSRSR 168
+ L ++ GR+ V A P + P +SRSR
Sbjct: 60 DGLNGTQIRGREIKVNEALPKKPF--------PEKSRSR 90
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
Length = 117
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A + G + ++ K + G+S+GF VT SE++M +E
Sbjct: 11 FVGGLAWATDDRSLEAAFSTFG--EILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|345870896|ref|ZP_08822845.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921050|gb|EGV31774.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+YVGNL++ TT++D+ +A G + V + GQSKGF V + + +
Sbjct: 2 NIYVGNLSYNTTDSDLREAFAPFG--EVAQVNLISDKFTGQSKGFGFVEMPNNSHADAAI 59
Query: 132 ERLPTLELHGRKPMV 146
+ L +L GR V
Sbjct: 60 KGLNGTDLQGRSIKV 74
>gi|340383699|ref|XP_003390354.1| PREDICTED: RNA-binding protein 34-like [Amphimedon queenslandica]
Length = 305
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
T+ +HC+++VGN+ + T E + S G D ++ ++ G +KGF V
Sbjct: 153 TNDTHCSVFVGNVPFGTDEEKLRKVFESCGPID--GIRIIKDTRTGINKGFAYVKFKDSS 210
Query: 126 SMSLVMERLPTLELHGRK 143
S+ ++ +E+ GRK
Sbjct: 211 SVLFACKKNERIEVEGRK 228
>gi|449432502|ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449487476|ref|XP_004157645.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 276
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VGNL+W T ++ A + G + + + + G+S+G+ V+ ++ M +
Sbjct: 194 KLFVGNLSWSVTSEILTQAFQEYG--NVVGARVIYDGETGKSRGYGFVSYSTKSEMETAL 251
Query: 132 ERLPTLELHGR 142
E + LEL GR
Sbjct: 252 ETINELELEGR 262
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
S LY GNL + + ++ ++ G+ + I+V + N G+S+GF VT+ S E
Sbjct: 99 SGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRN--TGKSRGFAFVTMSSIEDC 156
Query: 128 SLVMERLPTLELHGR 142
+ V+E L GR
Sbjct: 157 NKVIENLDGSAYMGR 171
>gi|357152187|ref|XP_003576037.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 102
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + +A RS G + +D K + G+S+GF VT +E++M +
Sbjct: 7 FVGGLAWVTDDQSLENAFRSFG--EILDAKVIPDRETGRSRGFGFVTFTTEQAMQNAINA 64
Query: 134 LPTLELHGRKPMV 146
+ ++ GR V
Sbjct: 65 MNGKDIDGRTISV 77
>gi|351709446|gb|EHB12365.1| Heterogeneous nuclear ribonucleoprotein D0 [Heterocephalus glaber]
Length = 271
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 49 SPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENA 108
+PAR R + + + +++G L+W TT+ D+ D G + +D +
Sbjct: 87 TPARTRRMKTTQKAT--AQREEWKMFMGGLSWDTTKKDLKDCFSKFG--EVVDCTLKLDP 142
Query: 109 SNGQSKGFCTVTLGSEESMSLVMER 133
G+S+GF V L ES+ VM++
Sbjct: 143 ITGRSRGFGFVLLKESESVDKVMDQ 167
>gi|164659141|ref|XP_001730695.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
gi|159104592|gb|EDP43481.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
Length = 190
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIG-VPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+YVGNL+W TT+ ++ A G + D+I +K + +G+S+GF VT +++
Sbjct: 2 AKVYVGNLSWSTTDDGLAQAFSPYGQLTDYIVMK---DRDSGRSRGFGFVTFMTQQEADA 58
Query: 130 VMERLPTLELHGRK 143
+ L EL GR+
Sbjct: 59 AIMALNEQELDGRR 72
>gi|344234704|gb|EGV66572.1| hypothetical protein CANTEDRAFT_117619 [Candida tenuis ATCC 10573]
Length = 472
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Query: 40 QPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDF 99
QP + + R+P + S S ++VGNL + + D +R G +
Sbjct: 213 QPGEKFSNRTPPSRERYTSSVKQSPLVPEPGTEIFVGNLPYSMNWQALKDLMREAGEVER 272
Query: 100 IDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRK 143
DV+ + G+S G+ TV + E L + E+ GRK
Sbjct: 273 ADVRLDQ---KGKSMGYGTVVFKTPEEAKLALNTFADYEIEGRK 313
>gi|217968141|ref|YP_002353647.1| RNP-1 like RNA-binding protein [Dictyoglomus turgidum DSM 6724]
gi|217337240|gb|ACK43033.1| RNP-1 like RNA-binding protein [Dictyoglomus turgidum DSM 6724]
Length = 96
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL+W TTE D+ G + V+ + + G+SKGF V +EE +++
Sbjct: 5 LYVGNLSWQTTEEDIKGLFG--GEGEIQSVRLITDRNTGRSKGFAFVET-TEEVAQKLID 61
Query: 133 RLPTLELHGRKPMVA 147
E +GRK +V+
Sbjct: 62 SYNGYEFNGRKIVVS 76
>gi|53713556|ref|YP_099548.1| RNA binding protein [Bacteroides fragilis YCH46]
gi|60681841|ref|YP_211985.1| RNA binding protein [Bacteroides fragilis NCTC 9343]
gi|265763881|ref|ZP_06092449.1| RNA binding protein [Bacteroides sp. 2_1_16]
gi|375358652|ref|YP_005111424.1| RNA binding protein [Bacteroides fragilis 638R]
gi|383118522|ref|ZP_09939263.1| hypothetical protein BSHG_2523 [Bacteroides sp. 3_2_5]
gi|423250156|ref|ZP_17231172.1| hypothetical protein HMPREF1066_02182 [Bacteroides fragilis
CL03T00C08]
gi|423255659|ref|ZP_17236588.1| hypothetical protein HMPREF1067_03232 [Bacteroides fragilis
CL03T12C07]
gi|423257283|ref|ZP_17238206.1| hypothetical protein HMPREF1055_00483 [Bacteroides fragilis
CL07T00C01]
gi|423265747|ref|ZP_17244750.1| hypothetical protein HMPREF1056_02437 [Bacteroides fragilis
CL07T12C05]
gi|423271518|ref|ZP_17250488.1| hypothetical protein HMPREF1079_03570 [Bacteroides fragilis
CL05T00C42]
gi|423275577|ref|ZP_17254521.1| hypothetical protein HMPREF1080_03174 [Bacteroides fragilis
CL05T12C13]
gi|423284355|ref|ZP_17263239.1| hypothetical protein HMPREF1204_02777 [Bacteroides fragilis HMW
615]
gi|52216421|dbj|BAD49014.1| RNA binding protein [Bacteroides fragilis YCH46]
gi|60493275|emb|CAH08059.1| RNA binding protein [Bacteroides fragilis NCTC 9343]
gi|251945827|gb|EES86234.1| hypothetical protein BSHG_2523 [Bacteroides sp. 3_2_5]
gi|263256489|gb|EEZ27835.1| RNA binding protein [Bacteroides sp. 2_1_16]
gi|301163333|emb|CBW22883.1| RNA binding protein [Bacteroides fragilis 638R]
gi|387778759|gb|EIK40854.1| hypothetical protein HMPREF1055_00483 [Bacteroides fragilis
CL07T00C01]
gi|392650452|gb|EIY44120.1| hypothetical protein HMPREF1067_03232 [Bacteroides fragilis
CL03T12C07]
gi|392653731|gb|EIY47383.1| hypothetical protein HMPREF1066_02182 [Bacteroides fragilis
CL03T00C08]
gi|392697214|gb|EIY90400.1| hypothetical protein HMPREF1079_03570 [Bacteroides fragilis
CL05T00C42]
gi|392701244|gb|EIY94403.1| hypothetical protein HMPREF1080_03174 [Bacteroides fragilis
CL05T12C13]
gi|392703405|gb|EIY96549.1| hypothetical protein HMPREF1056_02437 [Bacteroides fragilis
CL07T12C05]
gi|404580023|gb|EKA84735.1| hypothetical protein HMPREF1204_02777 [Bacteroides fragilis HMW
615]
Length = 81
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+Y+GNL++ EAD+ + G D VK + +SKGF V + +++ V
Sbjct: 1 MNMYIGNLSYRVKEADLRQVMEEYGTVD--SVKLIIDRETRKSKGFAFVEMPNDDEAKNV 58
Query: 131 MERLPTLELHGRKPMV 146
+ L E GR+ +V
Sbjct: 59 ISELNGAEYEGRQMVV 74
>gi|1346181|sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 169
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T E + A G + +D K + G+S+GF VT E+SM +E
Sbjct: 11 FVGGLAWATDERSLETAFSQFG--ELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 69 MNGQDLDGRSITV 81
>gi|544416|sp|Q05966.1|GRP10_BRANA RecName: Full=Glycine-rich RNA-binding protein 10
gi|17819|emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
Length = 169
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T +A++ G + ID K + G+S+GF VT E+SM ++
Sbjct: 9 FVGGLAWATGDAELERTFSQFG--EVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 67 MNGKELDGRTITV 79
>gi|194741284|ref|XP_001953119.1| GF17370 [Drosophila ananassae]
gi|190626178|gb|EDV41702.1| GF17370 [Drosophila ananassae]
Length = 343
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 22 EHVSTEHDDIDLYDDVTLQ-PFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--LYVGNL 78
+ V TE + D DVT P G A + S + S A+ + L+VG L
Sbjct: 5 QQVDTEMNGEDFTKDVTADAPSSTENGEGNAAGSTNGASENQSGASGQRDDDRKLFVGGL 64
Query: 79 TWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
+W TTE ++ D G + I+VK + G+S+GF + + E++ V
Sbjct: 65 SWETTEKELRDHFGKFGEIESINVK--TDPQTGRSRGFAFIVFTTTEAIDKV 114
>gi|147859670|emb|CAN83111.1| hypothetical protein VITISV_026573 [Vitis vinifera]
Length = 355
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A S + LY GNL + A ++ I++ G P+ ++V + + G+S+GF VT+ S
Sbjct: 60 AESPVNTKLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLY--DRDTGRSRGFAFVTMSSV 117
Query: 125 ESMSLVMERLPTLELHGRKPMVAY 148
E + V+E L E GR V +
Sbjct: 118 EDCNAVIENLDGSEYGGRTLRVNF 141
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A + G + ++ K + G+S+GF VT SE++M +E
Sbjct: 11 FVGGLAWATDDRSLEAAFSTFG--EILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|15982706|gb|AAL09839.1| RNA binding protein [Bacteroides fragilis 638R]
Length = 80
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+Y+GNL++ EAD+ + G D VK + +SKGF V + +++ V+
Sbjct: 2 NMYIGNLSYRVKEADLRQVMEEYGTVD--SVKLIIDRETRKSKGFAFVEMPNDDEAKNVI 59
Query: 132 ERLPTLELHGRKPMV 146
L E GR+ +V
Sbjct: 60 SELNGAEYEGRQMVV 74
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGN+ + TE D+++ G +F+ ++ E G+SKG+ V + E +E
Sbjct: 267 LYVGNVHFSITEDDLTNVFEPFGELEFVQLQKDE---TGRSKGYAFVQFANPEQARDALE 323
Query: 133 RLPTLELHGRKPMVA 147
++ EL GR V
Sbjct: 324 KMNGFELAGRAIRVG 338
>gi|384246748|gb|EIE20237.1| hypothetical protein COCSUDRAFT_57959 [Coccomyxa subellipsoidea
C-169]
Length = 303
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIG-VPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
S ++VG ++W TT+ +++D P +D + + +S+GF VT ++E M
Sbjct: 18 SDFKVFVGGISWHTTDQELADTFSKYAQAP--VDARVMLDRITNRSRGFGFVTFDTKEDM 75
Query: 128 SLVMERLPTLELHGRK 143
+ +L EL GRK
Sbjct: 76 EECIAKLHATELDGRK 91
>gi|336463347|gb|EGO51587.1| hypothetical protein NEUTE1DRAFT_132485 [Neurospora tetrasperma
FGSC 2508]
gi|350297442|gb|EGZ78419.1| hypothetical protein NEUTE2DRAFT_102369 [Neurospora tetrasperma
FGSC 2509]
Length = 379
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + +L WWTT+ D+ +R + D+ F E+ NG+SKG V S+++ S
Sbjct: 100 LMISDLHWWTTDDDIRGWVRQANCESELKDITFSEHKVNGKSKGQAYVEFTSQQAASATK 159
Query: 132 ERLPTLELH-GRKPMVAYPTRNVLYQFEAQNPLRS 165
+ L G++P +V+Y NP R+
Sbjct: 160 HVIDNLSSEVGQQP--GQKRHSVIYSSPIVNPFRT 192
>gi|162455692|ref|YP_001618059.1| RNA recognition motif-containing protein [Sorangium cellulosum So
ce56]
gi|161166274|emb|CAN97579.1| RNA-binding region RNP-1 (RNA recognition motif) [Sorangium
cellulosum So ce56]
Length = 139
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL + T+A + A G + DV + +GQS+GF VT+G+ E +E
Sbjct: 5 LYVGNLPFSATKASVQAAFAQSG--EVTDVHIVTDRESGQSRGFGFVTMGTPEQAQQAIE 62
Query: 133 RLPTLELHGR 142
+ + GR
Sbjct: 63 NMNGAMMDGR 72
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGN+ + TEAD+ + G +F ++ E NG+SKG+ V +E
Sbjct: 337 LYVGNIHFSITEADLKNVFEPFGELEFAQLQKEE---NGRSKGYGFVQFIDPAQAKEALE 393
Query: 133 RLPTLELHGRKPMVAY--------PTRNVLYQFEAQNP 162
++ EL GR V T+ +L +F + P
Sbjct: 394 KMNGFELAGRPIRVGLGNDKFTTESTQTLLVKFGSHTP 431
>gi|302811189|ref|XP_002987284.1| hypothetical protein SELMODRAFT_37571 [Selaginella moellendorffii]
gi|300144919|gb|EFJ11599.1| hypothetical protein SELMODRAFT_37571 [Selaginella moellendorffii]
Length = 163
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+VG L+W T + + + R G ++ K + +G+S+GF VT + +M ++
Sbjct: 5 CFVGGLSWSTDDQALESSFRQFGR--ILEAKVIIDRGSGRSRGFGFVTFADQRAMDEAID 62
Query: 133 RLPTLELHGRKPMV 146
RL EL GR V
Sbjct: 63 RLHNKELDGRVVTV 76
>gi|156346232|ref|XP_001621481.1| hypothetical protein NEMVEDRAFT_v1g76367 [Nematostella vectensis]
gi|156207460|gb|EDO29381.1| predicted protein [Nematostella vectensis]
Length = 88
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
+ + C Y+GNL++ E + D V +DV + G+ +GF VT GS+E
Sbjct: 5 AENKC--YIGNLSYSVDEQALEDKFHGYNV---VDVNIITDRETGRPRGFGFVTFGSKEE 59
Query: 127 MSLVMERLPTLELHGRKPM 145
M ++ +L GR PM
Sbjct: 60 MEKAIDEFDGQDLDGR-PM 77
>gi|168034546|ref|XP_001769773.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678882|gb|EDQ65335.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 69 SHCNLYVG-NLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
S L++G L W T E + DA S G +VK + G+S+GF V S E
Sbjct: 43 SSSKLFIGAGLAWATDENTLRDAFSSFGT--VTEVKIILDRDTGRSRGFGFVNFTSPEEA 100
Query: 128 SLVMERLPTLELHGRKPMVAYPT 150
+ ++ + EL GR+ V Y T
Sbjct: 101 EVALQEMDGRELAGRQIRVDYAT 123
>gi|343425336|emb|CBQ68872.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 361
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Query: 38 TLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVP 97
TL P + +P R + S +Y+G+L WW T+ + S+GV
Sbjct: 88 TLPSHPSGSTSAPLRSTMSTLAGRPKVTDPSIQNAVYIGDLNWWATDEAIRQIAASVGVS 147
Query: 98 -DFIDVKFFENASNGQSKGFCTVTLGSE 124
D+ F E+ NG+SKG V SE
Sbjct: 148 VSLNDITFSEHKVNGKSKGVAYVETESE 175
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
+S+ L++G +++ T E + +A G + +D + + G+S+GF +T S E
Sbjct: 37 SSAPSTKLFIGGVSYSTDEQSLREAFSKYG--EVVDARIIMDRETGRSRGFGFITYTSVE 94
Query: 126 SMSLVMERLPTLELHGRKPMVAYPT 150
S ++ L +LHGR V Y
Sbjct: 95 EASSAIQALDGQDLHGRPIRVNYAN 119
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 46 TGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFF 105
TG +PA + R L+VG L+W T + + DA S G + ++ +
Sbjct: 22 TGSTPAMFNAARLMS----------TKLFVGGLSWGTDDQSLKDAFTSFG--EVVEARVI 69
Query: 106 ENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYP 149
+ G+S+GF V+ + + M + EL GR V +
Sbjct: 70 TDRDTGKSRGFGFVSFSNGDDAKNAMSSMDGQELEGRNIHVNFA 113
>gi|168047544|ref|XP_001776230.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672463|gb|EDQ59000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%)
Query: 62 HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
H A + LYVGNL +AD++ + + V D VK + + +S+GF VT+
Sbjct: 564 HKCAAAQFGSTLYVGNLARSVGKADLAKVCQGLHVDDVKRVKVIYDQQSRKSRGFAFVTM 623
Query: 122 GSEESMSLVMERLPTLELHGRKPMVAY 148
+ + ++ L ++ GR V +
Sbjct: 624 ATNDDAHALISALDGFDMRGRALKVNF 650
>gi|453079896|gb|EMF07948.1| hypothetical protein SEPMUDRAFT_152282 [Mycosphaerella populorum
SO2202]
Length = 401
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 59 SHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFC 117
S +Q ++ L + L WWTTE D+ + GV + +D+ F E+ NG+S+G
Sbjct: 115 SAATAQVDPNATLALKLSELHWWTTEEDLRSFCATAGVESELVDIAFGEHKINGKSRGEA 174
Query: 118 TVTLGSEESMSLVMERL 134
+ S E+ S V + +
Sbjct: 175 YLEFSSREACSAVKKAV 191
>gi|406946955|gb|EKD77999.1| glycine-rich RNA-binding protein, partial [uncultured bacterium]
Length = 107
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S +YVGNL++ TTE + D G + ++K + + G+SKGF +T GS +
Sbjct: 2 SQSKIYVGNLSYNTTEDGLRDYFSQYGTIE--EIKLIIDFNTGRSKGFGFITYGSAQDCE 59
Query: 129 LVMERLPTLELHGRKPMV 146
+ +EL GRK V
Sbjct: 60 NALA-ANGVELDGRKLKV 76
>gi|332019507|gb|EGI59986.1| Heterogeneous nuclear ribonucleoprotein 27C [Acromyrmex echinatior]
Length = 340
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W TT+ ++ G + ID +N+ +G+S+GF VT ++SLV++
Sbjct: 2 LFVGGLSWETTQENLQRYFGRYG--EVIDCVVMKNSESGRSRGFGFVTFSDPANVSLVLQ 59
Query: 133 RLPTLELHGR 142
P +L GR
Sbjct: 60 NGPH-QLDGR 68
>gi|302815033|ref|XP_002989199.1| hypothetical protein SELMODRAFT_37572 [Selaginella moellendorffii]
gi|300143099|gb|EFJ09793.1| hypothetical protein SELMODRAFT_37572 [Selaginella moellendorffii]
Length = 166
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+VG L+W T + + + R G ++ K + +G+S+GF VT + +M ++
Sbjct: 5 CFVGGLSWSTDDQALESSFRQFGR--ILEAKVIIDRGSGRSRGFGFVTFADQRAMDEAID 62
Query: 133 RLPTLELHGRKPMV 146
RL EL GR V
Sbjct: 63 RLHNKELDGRVVTV 76
>gi|67483728|ref|XP_657084.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474323|gb|EAL51698.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449705266|gb|EMD45349.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 136
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+G+L + T+ + A G D K + + +SKGF VT +E +E
Sbjct: 4 LYIGSLAYSVTDESLKAAFEKFGT--VTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIE 61
Query: 133 RLPTLELHGRKPMV 146
+ EL GR+ V
Sbjct: 62 EMNEQELEGRRIKV 75
>gi|150007850|ref|YP_001302593.1| RNA binding protein [Parabacteroides distasonis ATCC 8503]
gi|255013449|ref|ZP_05285575.1| RNA binding protein [Bacteroides sp. 2_1_7]
gi|256840108|ref|ZP_05545617.1| RNA binding protein [Parabacteroides sp. D13]
gi|262381649|ref|ZP_06074787.1| RNA binding protein [Bacteroides sp. 2_1_33B]
gi|298376789|ref|ZP_06986744.1| RNA-binding protein [Bacteroides sp. 3_1_19]
gi|301310122|ref|ZP_07216061.1| RNA-binding protein [Bacteroides sp. 20_3]
gi|410103697|ref|ZP_11298618.1| hypothetical protein HMPREF0999_02390 [Parabacteroides sp. D25]
gi|423331654|ref|ZP_17309438.1| hypothetical protein HMPREF1075_01451 [Parabacteroides distasonis
CL03T12C09]
gi|423336363|ref|ZP_17314110.1| hypothetical protein HMPREF1059_00062 [Parabacteroides distasonis
CL09T03C24]
gi|149936274|gb|ABR42971.1| RNA binding protein [Parabacteroides distasonis ATCC 8503]
gi|256739038|gb|EEU52363.1| RNA binding protein [Parabacteroides sp. D13]
gi|262296826|gb|EEY84756.1| RNA binding protein [Bacteroides sp. 2_1_33B]
gi|298266667|gb|EFI08325.1| RNA-binding protein [Bacteroides sp. 3_1_19]
gi|300831696|gb|EFK62327.1| RNA-binding protein [Bacteroides sp. 20_3]
gi|409230224|gb|EKN23092.1| hypothetical protein HMPREF1075_01451 [Parabacteroides distasonis
CL03T12C09]
gi|409236426|gb|EKN29233.1| hypothetical protein HMPREF0999_02390 [Parabacteroides sp. D25]
gi|409240838|gb|EKN33612.1| hypothetical protein HMPREF1059_00062 [Parabacteroides distasonis
CL09T03C24]
Length = 81
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+Y+GNL + E+D+ + GV D VK + +SKGF + + +
Sbjct: 2 NIYIGNLNYRVRESDLQQILEEYGVVD--SVKIIVDRDTKRSKGFAFAEMPNAAEAQKAI 59
Query: 132 ERLPTLELHGRKPMV--AYPTR 151
E L E GR+ +V A P R
Sbjct: 60 EELNQAEYEGRQMVVKEAIPRR 81
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A + G + ++ K + G+S+GF VT SE++M +E
Sbjct: 11 FVGGLAWATDDRSLEAAFSTFG--EILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|302758260|ref|XP_002962553.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
gi|300169414|gb|EFJ36016.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
Length = 177
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 34 YDDVTLQPFPEHTGRSPARYRHHRYSHHHSQA-------TSSSHCNLYVGNLTWWTTEAD 86
+ V +Q H R YS + +A ++SH +++GNL W +
Sbjct: 55 FAQVAVQKLDGHI--VQGRALKASYSQPYKKAGKEGPVEVAASHTKVFIGNLPWGVDDGS 112
Query: 87 MSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMV 146
+ + R+ G ++VK + G+S+GF VTL S + ++ L + GR+ V
Sbjct: 113 LEEFFRAHG--KVVEVKIVYDRDTGRSRGFGFVTLSSPKEADEAVKSLDGADCDGRRLRV 170
>gi|429328186|gb|AFZ79946.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 191
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
T SS C +YVGNL+W ++ D ++ +G D I E+ G+SKG V EE
Sbjct: 2 TRSSKCRVYVGNLSWKVKWQELKDHMKQVG--DVIRADIIEDYI-GRSKGCGIVEFADEE 58
Query: 126 SMSLVMERLPTLELHGRKPMV 146
+ + + L L R+ V
Sbjct: 59 TAARAISELNDTLLMDRQIFV 79
>gi|399931803|gb|AFP57451.1| RNA-binding glycine-rich protein [Nicotiana plumbaginifolia]
Length = 144
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T + + DA + G D +D + + +G+ +GF V +E + ++
Sbjct: 40 LFVGGLSWGTDDQSLRDAFATFG--DVVDARVIVDRDSGRPRGFGFVNFSDDECANEAIK 97
Query: 133 RLPTLELHGRKPMVA 147
+ EL GR V+
Sbjct: 98 AMDGQELQGRNIRVS 112
>gi|344284992|ref|XP_003414248.1| PREDICTED: hypothetical protein LOC100654996 [Loxodonta africana]
Length = 595
Score = 42.0 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 41 PFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFI 100
P P H+ SP H + +++G L+W TT+ D+ D G + +
Sbjct: 315 PLPSHSNSSP--------RHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG--EVV 364
Query: 101 DVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
D + G+S+GF V ES+ VM++
Sbjct: 365 DCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 397
>gi|322796762|gb|EFZ19195.1| hypothetical protein SINV_16494 [Solenopsis invicta]
Length = 138
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VG L+W TT+ ++ G + ID +N+ +G+S+GF VT ++SLV+
Sbjct: 8 KLFVGGLSWETTQENLQRYFGRYG--EVIDCVVMKNSESGRSRGFGFVTFSDPANVSLVL 65
Query: 132 ERLPTLELHGR 142
+ P +L GR
Sbjct: 66 QNGPH-QLDGR 75
>gi|430812740|emb|CCJ29861.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 185
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 62 HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
H+Q S++ +Y+G L + TE D+ G P +D+ + G+SKGFC +
Sbjct: 22 HAQYKDSAY--IYIGGLPYDLTEGDIICIFSQYGEP--LDINLIRDKKTGKSKGFCFLKY 77
Query: 122 GSEESMSLVMERLPTLELHGR 142
+ S L ++ L ++ GR
Sbjct: 78 EDQRSTILAVDNLSGAKVLGR 98
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
LYVG+L + TE+D+ G +F+D+ + G+SKG+ V E +
Sbjct: 373 MQLYVGSLHFNLTESDIKQVFEPFGELEFVDL--HRDPMTGRSKGYAFVQYKRAEDARMA 430
Query: 131 MERLPTLELHGR 142
+E++ EL GR
Sbjct: 431 LEQMEGFELAGR 442
>gi|241957041|ref|XP_002421240.1| poly(A+) RNA-binding protein, putative; single-strand telomeric
DNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223644584|emb|CAX40572.1| poly(A+) RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 460
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 47 GRSPARYRHHRYSHHHSQATSSSH--CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKF 104
GR RY+ R + +++ S +++GNL + + D +R G DV+
Sbjct: 226 GRYNDRYQSSRRNDNYAPPPPPSKPGTEVFIGNLPFSINWQALKDLMRDAGEVIRADVRL 285
Query: 105 FENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRK 143
+ G S+GF TV +EE + +E E+ GRK
Sbjct: 286 ---DNYGNSRGFGTVVFSTEEEAAKAVEMFQGYEIEGRK 321
>gi|268569436|ref|XP_002640522.1| Hypothetical protein CBG18684 [Caenorhabditis briggsae]
Length = 84
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S S ++YVGN + TTE +M D S+G +V+ + G+ +GF V ++S
Sbjct: 2 SGSGFSIYVGNAPYQTTEQEMGDFFSSVGT--VTNVRIVLDRETGRPRGFAFVEFSEQQS 59
Query: 127 MSLVMERLPTLELHGRKPMVAYPTR 151
+ L + +GR+ V +R
Sbjct: 60 AERAVNELNGADFNGRQLRVNIASR 84
>gi|396467794|ref|XP_003838028.1| predicted protein [Leptosphaeria maculans JN3]
gi|312214593|emb|CBX94584.1| predicted protein [Leptosphaeria maculans JN3]
Length = 403
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPD-FIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L V ++ WW +E D+ G D ++V F E+ NG+SKG V L + ++ + +
Sbjct: 113 LMVNDVNWWISEEDIRGWANQSGCEDELVEVTFNEHKVNGKSKGQVYVQLQTPQAATALK 172
Query: 132 ERLPTL---ELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSR 168
++ L + H +KP + P N P R + R
Sbjct: 173 HQIDNLFKDQAHTKKPTAIFNPPHVNPFKTLPKDVPAREKGR 214
>gi|116781810|gb|ABK22248.1| unknown [Picea sitchensis]
Length = 215
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+VG L+W T++ + DA G I+ K + G+S+GF VT ++SM ++
Sbjct: 9 CFVGGLSWSTSDRTLEDAFHKFGH--LIEAKVVVDRDTGRSRGFGFVTFDDKKSMEDAID 66
Query: 133 RLPTLELHGRKPMV 146
+ + L GR V
Sbjct: 67 SMHGMSLDGRSITV 80
>gi|157131106|ref|XP_001655804.1| tRNA selenocysteine associated protein (secp43) [Aedes aegypti]
gi|108871647|gb|EAT35872.1| AAEL011988-PA [Aedes aegypti]
Length = 318
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
SS C L++G+L + TE + A R +G D VK N G G+C V+ ++E+
Sbjct: 2 SSIQCQLWMGSLESYMTENFILAAFRKMG-EDPQTVKLMRNKYTGDPAGYCFVSFKTDEA 60
Query: 127 MSLVMERLPTLELHGRKPMVAY 148
M +L + G P+V +
Sbjct: 61 AIDAMHKLNGKPIPGTNPLVRF 82
>gi|67624203|ref|XP_668384.1| RNA-binding protein SiahBP [Cryptosporidium hominis TU502]
gi|54659576|gb|EAL38146.1| RNA-binding protein SiahBP [Cryptosporidium hominis]
Length = 615
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
SS +YVG+L + EAD+ S G ID+ N +SKGFC + S+ES
Sbjct: 208 SSQISRIYVGSLDYSLNEADLKQVFGSFGPIVNIDMPREGN----RSKGFCFIEYTSQES 263
Query: 127 MSLVMERLPTLELHGRKPMVAYPT 150
+ + + L GR V PT
Sbjct: 264 AEMALATMNRFVLKGRPIRVGRPT 287
>gi|340975724|gb|EGS22839.1| hypothetical protein CTHT_0013150 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 397
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + +L WW T+ D+ +R G + D+ F E+ NG+SKG V S+++ +
Sbjct: 108 LMIQDLNWWNTDDDIRGWVRQAGCEHELKDITFSEHKVNGKSKGQAYVEFTSQQAATATK 167
Query: 132 ERLPTLELHGRKPMVAYPTR--NVLYQFEAQNPLRS 165
+ + G++ R N +Y NP R+
Sbjct: 168 HVIDAI---GKQAESQPGGRRYNAIYTNPNHNPFRT 200
>gi|255080804|ref|XP_002503975.1| predicted protein [Micromonas sp. RCC299]
gi|226519242|gb|ACO65233.1| predicted protein [Micromonas sp. RCC299]
Length = 1399
Score = 42.0 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 78 LTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTL 137
LTWWTT+ D+ G FF SNG+SKG V + + E+LP
Sbjct: 1222 LTWWTTDVDIETYCAEYGTVK--SCVFFAEKSNGKSKGTVCVEFEDPAAARVCYEKLPYK 1279
Query: 138 ELHGRKPMVAYPTR 151
+ GR V Y +
Sbjct: 1280 RIRGRDISVKYAPK 1293
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + A + G +D K + G+S+GF VT SE+SM +E
Sbjct: 11 FVGGLAWATNNETLEHAFANFG--QVLDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|325179817|emb|CCA14220.1| RNA binding protein putative [Albugo laibachii Nc14]
Length = 360
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL+W D+ D +RS G D E G+SKG VT +E +E
Sbjct: 72 VYVGNLSWKVKWQDLKDHMRSAG--DVEHAVIME--VGGRSKGCGIVTYATESEAQNAIE 127
Query: 133 RLPTLELHGRKPMV 146
L EL GRK V
Sbjct: 128 TLNDTELDGRKIFV 141
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 46 TGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFF 105
GR P R H HS S +YVGNL W TT ++ + +S G + +V F
Sbjct: 264 AGRGP---REGNSGHSHS----SDVKQVYVGNLPWDTTSRNLENLFQSAGDVERAEVVEF 316
Query: 106 ENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTR 151
+G+S+GF V S ++ L E +GR+ V R
Sbjct: 317 ---PDGRSRGFGIVKFKSSSEAQCAIDELNGTEHNGRRLEVRLDKR 359
>gi|345327974|ref|XP_001505245.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Ornithorhynchus anatinus]
Length = 306
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 51 ARYRHHRYSHHHSQATSSS--HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENA 108
+ +RH S HS+A ++ +++G L+W TT+ D+ D G + +D +
Sbjct: 26 SNHRHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG--EVVDCTLKLDP 83
Query: 109 SNGQSKGFCTVTLGSEESMSLVMER 133
G+S+GF V ES+ VM++
Sbjct: 84 ITGRSRGFGFVLFKEAESVDKVMDQ 108
>gi|66362264|ref|XP_628096.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|46227417|gb|EAK88352.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|323508937|dbj|BAJ77361.1| cgd1_2730 [Cryptosporidium parvum]
gi|323510323|dbj|BAJ78055.1| cgd1_2730 [Cryptosporidium parvum]
Length = 693
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
SS +YVG+L + EAD+ S G ID+ N +SKGFC + S+ES
Sbjct: 286 SSQISRIYVGSLDYSLNEADLKQVFGSFGPIVNIDMPREGN----RSKGFCFIEYTSQES 341
Query: 127 MSLVMERLPTLELHGRKPMVAYPT 150
+ + + L GR V PT
Sbjct: 342 AEMALATMNRFVLKGRPIRVGRPT 365
>gi|393217699|gb|EJD03188.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 142
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
+YVGNL+W TT+ + A G +D + G+S+GF VT SE +
Sbjct: 3 AKVYVGNLSWNTTDDTLRKAFSDYG--QVVDSIVMRDRDTGRSRGFGFVTFSSETEATGA 60
Query: 131 MERLPTLELHGRKPMVAYP 149
+ L E GR+ V +
Sbjct: 61 ISALNEQEFEGRRIKVNFA 79
>gi|403173301|ref|XP_003332385.2| hypothetical protein PGTG_13770 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170218|gb|EFP87966.2| hypothetical protein PGTG_13770 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 965
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 53 YRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQ 112
+ H YS H Q S+ L+VGNL + D+ D R G DV + G+
Sbjct: 450 FNHAPYSSIHGQNVCSASRLLFVGNLPFNLQWQDLKDLFRQAGNILRADVA---TTAEGR 506
Query: 113 SKGFCTVTLGSEESMSLVMERLPTLELHGR 142
S+GF TV + E +E EL GR
Sbjct: 507 SRGFGTVLFATAEDAMKALEMYDGYELKGR 536
>gi|291287189|ref|YP_003504005.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884349|gb|ADD68049.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
Length = 94
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+YVGNL++ ++E ++ + ++G D + + G+SKGF V + E +
Sbjct: 2 NIYVGNLSYTSSEDELFELFENMGQVD--SARIITDRDTGRSKGFGFVEMADAEQAKAAI 59
Query: 132 ERLPTLELHGRKPMV--AYPTRN 152
E+L E GR V A P N
Sbjct: 60 EQLNGTEFGGRNLTVNEAKPRNN 82
>gi|297620951|ref|YP_003709088.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376252|gb|ADI38082.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293226|emb|CCB91217.1| putative RNA-binding protein rbpA [Waddlia chondrophila 2032/99]
Length = 92
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVGNL++ +E D S G + + K + GQSKGF V +E+ +
Sbjct: 2 KLYVGNLSYRVSEDQFKDYFASFG--EVLSAKIITDRFTGQSKGFGFVEFADKEAAEEAI 59
Query: 132 ERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSR 168
+ L GR +V N E + P RS++R
Sbjct: 60 KELNGSNFEGRSIVV-----NEAKPMEDRPPRRSKTR 91
>gi|195437766|ref|XP_002066811.1| GK24678 [Drosophila willistoni]
gi|194162896|gb|EDW77797.1| GK24678 [Drosophila willistoni]
Length = 357
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
SS HC L++G+L + TE + A R +G D V+ N G+ G+C V S++
Sbjct: 2 SSVHCQLWMGSLESYMTENFIIAAFRKMG-EDPTTVRLMRNKYTGEPAGYCFVNFISDDH 60
Query: 127 MSLVMERLPTLELHGRKPMVAY 148
M +L + G P+V +
Sbjct: 61 ALDAMHKLNGKPIPGTNPIVRF 82
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + A G + +D K + G+S+GF VT +E+SM+ +E
Sbjct: 9 FVGGLAWATDNEALEKAFSQYG--EIVDSKIINDRETGRSRGFGFVTFANEKSMNDAIEA 66
Query: 134 LPTLELHGRKPMV 146
+ +L GR V
Sbjct: 67 MNGQDLDGRNITV 79
>gi|209881578|ref|XP_002142227.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557833|gb|EEA07878.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 533
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVG+L + +EAD+ S G ID+ N +SKGFC + ++ES + +
Sbjct: 158 IYVGSLDYSLSEADLRQVFGSFGTIVNIDMPREGN----RSKGFCFIEYTTQESAEMALA 213
Query: 133 RLPTLELHGRKPMVAYPTRNVL 154
+ L GR V PT ++
Sbjct: 214 TMNRFVLKGRPIKVGRPTNAIV 235
>gi|167537650|ref|XP_001750493.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771033|gb|EDQ84707.1| predicted protein [Monosiga brevicollis MX1]
Length = 382
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+Y+G L + TE D+ G P D+ + +G+SKGFC + + S L ++
Sbjct: 34 IYIGGLDYRFTEGDVLSVFSQYGEP--TDINLVRDKDSGKSKGFCFLAYEDQRSTILAVD 91
Query: 133 RLPTLELHGRKPMV 146
++L GR V
Sbjct: 92 NFNGVKLAGRTIRV 105
>gi|422295561|gb|EKU22860.1| glycine-rich rna-binding protein 4 [Nannochloropsis gaditana
CCMP526]
Length = 186
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 63 SQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLG 122
S S L+VGNL++ T A + +A G F V EN GQS+GF V
Sbjct: 22 SPGQSEEGYKLFVGNLSFRTESAALREAFEPFGRIVFSTV--IENRETGQSRGFGFVVYE 79
Query: 123 SEESMSLVMERLPTLELHGR 142
+ + R+ EL GR
Sbjct: 80 QKHEADAAISRMDNAELDGR 99
>gi|311780287|gb|ADQ08684.1| putative glycine-rich RNA-binding protein 1 [Malus hupehensis]
Length = 164
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A++ +VG L W T + A G + I+ K + G+S+GF VT GSE
Sbjct: 2 ASAEIEFRCFVGGLAWATDNEALERAFSQYG--EIIESKIINDRETGRSRGFGFVTFGSE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
++M +E + L GR V
Sbjct: 60 QAMRDAIEGMNGQNLDGRNITV 81
>gi|296142019|gb|ADG96008.1| putative glycine-rich RNA-binding protein 1 [Malus prunifolia]
Length = 171
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A++ +VG L W T + A G + I+ K + G+S+GF VT GSE
Sbjct: 2 ASAEIEFRCFVGGLAWATDNEALERAFSQYG--EIIESKIINDRETGRSRGFGFVTFGSE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
++M +E + L GR V
Sbjct: 60 QAMRDAIEGMNGQNLDGRNITV 81
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 54 RHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQS 113
R S +Q + +Y+GNL+W E +++ G + +D K + G+S
Sbjct: 199 RDKSRSEQRNQTNNDGQHRVYIGNLSWDVNEEILNEVFSEHG--NLLDAKIVFDRETGRS 256
Query: 114 KGFCTVTLGSEESMSLVMERLPTLELHGRKPMV--AYPTRNV 153
+GF +T ++ + L EL GR V A +RN+
Sbjct: 257 RGFGFITFSTQSEAEAAVASLNGKELEGRAMRVDLALSSRNI 298
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+Y+GNL + A+++ I+ G + ++V + +N G+S+GF T+ S E + ++E
Sbjct: 113 VYLGNLPFSCDSAELAGIIQEHGSVEMVEVIYDQN--TGRSRGFAFATMSSVEDANALVE 170
Query: 133 RLPTLELHGR 142
L + GR
Sbjct: 171 NLDGSQYGGR 180
>gi|427777737|gb|JAA54320.1| Putative glycine rich protein [Rhipicephalus pulchellus]
Length = 355
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
T+ L+VG ++W T D+ + GV +DV + + G+S+GF VT +++
Sbjct: 56 TNEDERKLFVGGISWDTDNKDLREYFSKFGV--VVDVNIKTDPTTGKSRGFGFVTFNAKD 113
Query: 126 SMSLVMERLP 135
++ V++ P
Sbjct: 114 AIEAVLKATP 123
>gi|6911146|gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A++ +VG L W TT+ +S+A G + ++ K + G+S+GF VT G E
Sbjct: 2 ASADVEFRCFVGGLAWATTDQSLSEAFSQYG--EVLESKVINDRETGRSRGFGFVTFGDE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
+SM + + L GR V
Sbjct: 60 KSMKDAIVGMNGQTLDGRNITV 81
>gi|406911424|gb|EKD51218.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 125
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNL + +A + + G + + + ++ NG+SKGF V + ++E ++
Sbjct: 5 LYIGNLPYSVDDAQLESMAVAFG--EVVSAQVIQDKFNGRSKGFGFVEMANDEEAQKAID 62
Query: 133 RLPTLELHGRKPMV 146
L E+ GRK +V
Sbjct: 63 DLNNKEIDGRKIIV 76
>gi|449437482|ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449528229|ref|XP_004171108.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+Y GNL W T + DA + P + K + ++G+S+GF V+ + E +
Sbjct: 219 KIYAGNLGWGLTSQSLRDAFEN--QPGILSAKIIYDRASGKSRGFGFVSFETAEDAESAL 276
Query: 132 ERLPTLELHGR 142
E + +E+ GR
Sbjct: 277 ESMNGVEVEGR 287
>gi|367014029|ref|XP_003681514.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
gi|359749175|emb|CCE92303.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
Length = 547
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
C +++G L W TTE + D G ID+K ++ + G+S+GF +T S+ V
Sbjct: 157 CKMFIGGLNWETTEDTLRDYFSKYG--KVIDLKIMKDTNTGRSRGFGFLTFDEPSSVDEV 214
Query: 131 MERLPTLELHGRKPMVAYP 149
++ L+ P A P
Sbjct: 215 VKTQHILDGKVIDPKRAIP 233
>gi|357121842|ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 275
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S LYVGNL+W + + + G +D K + +G+S+GF VT GS + ++
Sbjct: 187 SGNKLYVGNLSWGVDNSTLENLFSEQG--KVLDAKVIYDRDSGRSRGFGFVTYGSADEVN 244
Query: 129 LVMERLPTLELHGRKPMV 146
+ L ++L GR+ V
Sbjct: 245 NAISNLDGVDLDGRQIRV 262
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
S L+VGNL + A ++ G + ++V + + G+S+GF VT+ + E +
Sbjct: 81 SEDLKLFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVY--DRMTGRSRGFGFVTMSTAEEV 138
Query: 128 SLVMERLPTLELHGR 142
S +E+ GR
Sbjct: 139 SAAVEQFNGYTFQGR 153
>gi|346466281|gb|AEO32985.1| hypothetical protein [Amblyomma maculatum]
Length = 321
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
T+ L+VG ++W T D+ + GV +DV + + G+S+GF VT +++
Sbjct: 27 TNEDERKLFVGGISWDTDNKDLREYFSKFGV--VVDVNIKTDPTTGKSRGFGFVTFNAKD 84
Query: 126 SMSLVMERLP 135
++ V++ P
Sbjct: 85 AIEAVLKATP 94
>gi|386346963|ref|YP_006045212.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|339411930|gb|AEJ61495.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 100
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL + TTE + G + VK + +G SKGF V + SEE+ +
Sbjct: 5 IYVGNLNYQTTEDTLRQLFEQYGEVE--SVKIITDRDSGFSKGFGFVEMASEEAGEAAIS 62
Query: 133 RLPTLELHGRKPMV 146
L EL GR+ V
Sbjct: 63 ALNQHELEGRQLRV 76
>gi|41055184|ref|NP_957491.1| transformer-2 protein homolog beta [Danio rerio]
gi|29124601|gb|AAH49051.1| Splicing factor, arginine/serine-rich, 10 [Danio rerio]
Length = 278
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H +A +C L V L+ +TTE D+ + G DV + + +S+G
Sbjct: 108 NRRRHIGDRANPDPNCCLGVFGLSLYTTERDLREVFSKYGP--LSDVCIVYDQQSRRSRG 165
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + E ER +EL GR+ V Y
Sbjct: 166 FALVYFENREDSKEAKERANGMELDGRRIRVDY 198
>gi|34540433|ref|NP_904912.1| RNA-binding protein [Porphyromonas gingivalis W83]
gi|188994532|ref|YP_001928784.1| RNA-binding protein [Porphyromonas gingivalis ATCC 33277]
gi|334147542|ref|YP_004510471.1| RNA-binding protein [Porphyromonas gingivalis TDC60]
gi|419970956|ref|ZP_14486425.1| hypothetical protein HMPREF1322_0287 [Porphyromonas gingivalis W50]
gi|34396746|gb|AAQ65811.1| RNA-binding protein [Porphyromonas gingivalis W83]
gi|188594212|dbj|BAG33187.1| RNA-binding protein [Porphyromonas gingivalis ATCC 33277]
gi|333804698|dbj|BAK25905.1| RNA-binding protein [Porphyromonas gingivalis TDC60]
gi|392609600|gb|EIW92405.1| hypothetical protein HMPREF1322_0287 [Porphyromonas gingivalis W50]
Length = 97
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+YVGNL + E D++ ++ G + + G+S+GF V + E
Sbjct: 3 MNIYVGNLNYRVREEDLTGLLQQYGA--VTSARVITDRETGRSRGFGFVEMEDENDARRA 60
Query: 131 MERLPTLELHGRKPMV 146
+E L E GRK +V
Sbjct: 61 IEELFDQEFQGRKLIV 76
>gi|384485550|gb|EIE77730.1| hypothetical protein RO3G_02434 [Rhizopus delemar RA 99-880]
Length = 169
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 63 SQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTL 121
+Q TSS +Y+G L W+TT+ D+ + + D + ++ FFE NG+SKG +
Sbjct: 95 NQPTSS----IYLGELHWYTTDKDIKSLLEKANLIDHLKELTFFEYKMNGKSKGIVFLEF 150
Query: 122 GSEESMS 128
+EE S
Sbjct: 151 DNEEYAS 157
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Query: 66 TSSSHCN------LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTV 119
S+SH N LYVGN+ + TE D+ + G +F+ ++ E G+S+G+ V
Sbjct: 257 ASTSHHNSVPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDE---TGRSRGYGFV 313
Query: 120 TLGSEESMSLVMERLPTLELHGRKPMVAY--------PTRNVLYQFEAQN 161
+E++ +L GR V T N+L +F+ QN
Sbjct: 314 QFRDPNQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQN 363
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 46 TGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFF 105
G +PA + R+ + L+VG L+W T + + +A S G + + +
Sbjct: 22 AGSAPAMFNAARFMSNK----------LFVGGLSWGTNDGSLKEAFSSFG--EVYEARVI 69
Query: 106 ENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYP 149
+ G+S+GF V +EE + EL GR V +
Sbjct: 70 TDRETGRSRGFGFVEFSNEEDAKKAASSMDGQELDGRSVRVNFA 113
>gi|359482021|ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VG L+++TTE +S+ G ++ K + + +SKGF VT SEE
Sbjct: 35 KLFVGGLSFYTTEKGLSEHFSQYG--QVVEAKIVMDRVSDRSKGFGFVTFASEEEAQKAR 92
Query: 132 ERLPTLELHGRKPMVAY 148
+ EL+GR V Y
Sbjct: 93 TEMDGKELNGRTIFVDY 109
>gi|209976406|gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Chorispora bungeana]
Length = 175
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A++ +VG L W T + + A G D +D K + G+S+GF VT E
Sbjct: 2 ASADVEFRCFVGGLAWATDDRALETAFSQYG--DVVDSKIINDRETGRSRGFGFVTFKDE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
+SM +E + +L GR V
Sbjct: 60 KSMKDAIEGMNGQDLDGRSITV 81
>gi|46129370|ref|XP_389046.1| hypothetical protein FG08870.1 [Gibberella zeae PH-1]
Length = 929
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSL 129
+L + L WW T+ D+ R G D I D+ F E+ NG+SKG + S ++ +
Sbjct: 91 TSLMISELNWWNTDDDIRGWAREAGCEDEIKDITFSEHKVNGKSKGQAYIEFYSPQASTA 150
Query: 130 VMERLPTL----ELHGRKPMVAY--PTRNVLYQFEAQNPLRSRSR 168
R+ + + +K +AY P N P RS+ +
Sbjct: 151 TKHRIEQILAESQAAQKKVTLAYWNPHINPFKTLPKDAPTRSKDQ 195
>gi|449301994|gb|EMC98003.1| hypothetical protein BAUCODRAFT_410594 [Baudoinia compniacensis
UAMH 10762]
Length = 272
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 43 PEHTGRSPA-----RYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGV- 96
P H G +PA H +Y ++ L + +L WWTTE D+ GV
Sbjct: 89 PHHNGTAPASDNNNNNDHQQYPDDRPLEPGATPA-LKLTDLHWWTTEEDLRSLCSRAGVG 147
Query: 97 ---PDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERL 134
+ +D+ F E+ NG+SKG + S ++ S V +
Sbjct: 148 VVEEELLDLSFAEHKINGKSKGEAYLEFASPQAASAVKREV 188
>gi|332249061|ref|XP_003273679.1| PREDICTED: RNA-binding protein 39 [Nomascus leucogenys]
Length = 432
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 43 PEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVP--DFI 100
P +SPA ++ Q S+ LYVG+L + TE D +R I P
Sbjct: 130 PFRKDKSPAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITE----DMLRGIFEPFGRIE 185
Query: 101 DVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPT 150
++ ++ G+SKG+ +T E +E+L EL GR V + T
Sbjct: 186 SIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVT 235
>gi|336258532|ref|XP_003344078.1| hypothetical protein SMAC_09061 [Sordaria macrospora k-hell]
gi|380093052|emb|CCC09289.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 378
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + +L WWTT+ D+ +R + D+ F E+ NG+SKG V S+++ S
Sbjct: 99 LMISDLHWWTTDDDIRGWVRQANCESEMKDITFSEHKVNGKSKGQAYVEFTSQQAASATK 158
Query: 132 ERLPTLELH-GRKPMVAYPTRNVLYQFEAQNPLRS 165
+ L G++P +V+Y NP R+
Sbjct: 159 HVIDNLSSEIGQQP--GQKRHSVIYSSPVVNPFRT 191
>gi|255717440|ref|XP_002555001.1| KLTH0F18766p [Lachancea thermotolerans]
gi|238936384|emb|CAR24564.1| KLTH0F18766p [Lachancea thermotolerans CBS 6340]
Length = 588
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
C +++G L W TTE ++ D G D+K + + G+S+GF +T S+ V
Sbjct: 208 CKMFIGGLNWETTEDNLKDYFSKYG--QVTDLKIMRDNATGRSRGFGFLTFAEASSVDEV 265
Query: 131 MERLPTLELHGRKPMVAYP 149
++ L+ P A P
Sbjct: 266 VKTQHILDGKVIDPKRAIP 284
>gi|255716984|ref|XP_002554773.1| KLTH0F13442p [Lachancea thermotolerans]
gi|238936156|emb|CAR24336.1| KLTH0F13442p [Lachancea thermotolerans CBS 6340]
Length = 134
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 11/98 (11%)
Query: 49 SPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENA 108
SP HH Y +Y+G L TE D+ GVP +D+ +
Sbjct: 21 SPKASWHHEYR---------DQAYVYIGGLNKELTEGDVLTVFSQYGVP--VDINLVRDR 69
Query: 109 SNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMV 146
G+SKGFC + + S L ++ L + GR V
Sbjct: 70 ETGESKGFCYLKFEDQRSSILAVDNLNGAVVAGRAIKV 107
>gi|405117757|gb|AFR92532.1| transformer-2-beta isoform 3 [Cryptococcus neoformans var. grubii
H99]
Length = 214
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L V L+ TTE D+ D G + I + + + G+S+GF +T+ S E + ++
Sbjct: 43 LGVFGLSVRTTERDLQDEFSRHGKIEKIVIVY--DQRTGRSRGFAFITMRSIEDATQCID 100
Query: 133 RLPTLELHGRKPMVAY 148
RL L +HGR V Y
Sbjct: 101 RLNGLTIHGRNIRVDY 116
>gi|383851133|ref|XP_003701094.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Megachile
rotundata]
Length = 338
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 26 TEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--------LYVGN 77
+ ++ D +D+ Q F E G + + SQ S+ N L+VG
Sbjct: 2 ADQENKDFSEDIADQNF-EQNGEAENGGGDAAENGQESQEDRSTGGNQDSLNDRKLFVGG 60
Query: 78 LTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+W TT+ ++ D + G + I+VK + + G+S+GF + ES+ +M
Sbjct: 61 LSWETTDKELRDHFGTYGDIESINVK--TDPNTGRSRGFAFIVFAKAESLDKIM 112
>gi|224107511|ref|XP_002314506.1| predicted protein [Populus trichocarpa]
gi|222863546|gb|EEF00677.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+ LY GNL + A ++ I+ G P+ ++V + + G+S+GF VT+ S E +
Sbjct: 106 NTKLYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLY--HRETGRSRGFAFVTMSSIEDCNA 163
Query: 130 VMERLPTLELHGR 142
V+E L + GR
Sbjct: 164 VIENLDESQYMGR 176
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VGNL+W T ++ A + G + + + + G+S+G+ V ++ M +
Sbjct: 199 KLFVGNLSWSATSESLTQAFQEYG--NVVGARVLYDGETGKSRGYGFVCYSTKAEMQTAL 256
Query: 132 ERLPTLELHGR 142
L +EL GR
Sbjct: 257 VSLDGVELEGR 267
>gi|406946237|gb|EKD77506.1| glycine-rich RNA-binding protein [uncultured bacterium]
Length = 113
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S +YVGNL++ TTE ++ D G + D+K + + G+SKGF +T S +
Sbjct: 2 SQSKIYVGNLSYNTTEDELRDYFSQFG--NIEDIKLIIDFNTGRSKGFGFITYASIQDCE 59
Query: 129 LVMERLPTLELHGRKPMV 146
+ +++ GRK V
Sbjct: 60 SAVTTANGVDMGGRKLKV 77
>gi|383142223|gb|AFG52471.1| Pinus taeda anonymous locus CL931Contig1_02 genomic sequence
Length = 85
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
S+ ++VGNL W A++++ + G D V+ + G+S+GF VT+ ++E
Sbjct: 14 SADIKVFVGNLPWSVDSAELAELFKDAG--DVTMVEVIYDRQTGRSRGFAFVTMATQEDA 71
Query: 128 SLVMERLPTLELHG 141
+E+L E G
Sbjct: 72 DSAVEKLNGYEYQG 85
>gi|115453241|ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|18921322|gb|AAL82527.1|AC084766_13 putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|108708430|gb|ABF96225.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548692|dbj|BAF12135.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|125586437|gb|EAZ27101.1| hypothetical protein OsJ_11032 [Oryza sativa Japonica Group]
gi|215697052|dbj|BAG91046.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766568|dbj|BAG98727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 60 HHHSQATSSSHCN-LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCT 118
SQ N +YVGNL+W A +++ G + ++ K + +G+S+GF
Sbjct: 168 EQSSQRAPRGEANRVYVGNLSWGVDNAALANLFSGEG--EVLEAKVIYDRESGRSRGFGF 225
Query: 119 VTLGSEESMSLVMERLPTLELHGRK 143
VT GS E + + L ++ GR+
Sbjct: 226 VTYGSAEEVENAVSNLDGADMDGRQ 250
>gi|388504962|gb|AFK40547.1| unknown [Lotus japonicus]
Length = 285
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYV L W + AD+ D G DV+ +G+ KG+ VT+ S E +
Sbjct: 87 KLYVFTLPWSMSAADIKDLFGQCGT--VTDVEII-RGKDGRGKGYAFVTMASGEEAQAAV 143
Query: 132 ERLPTLELHGRKPMVAYPTR 151
++ TLEL GR V R
Sbjct: 144 DKFDTLELSGRILRVELAKR 163
>gi|378727233|gb|EHY53692.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 381
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L++GN+++ T+ D+S+ R G+ + IDV+ + GQ +GF +S M+
Sbjct: 283 LFIGNMSFEMTDRDLSNLFR--GIRNVIDVRVAIDRRTGQPRGFAHADFIDVKSAMEAMK 340
Query: 133 RLPTLELHGRKPMVAY 148
L E++GR+ V Y
Sbjct: 341 VLSEKEIYGRRLRVDY 356
>gi|383850030|ref|XP_003700631.1| PREDICTED: uncharacterized protein LOC100880966 [Megachile
rotundata]
Length = 301
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S C L V L+ +TTE + G + + V F +A G+S+GFC V S E
Sbjct: 137 SRC-LGVFGLSIFTTEQQIYHIFSKHGPVERVQVVF--DAKTGRSRGFCFVYFESAEDAK 193
Query: 129 LVMERLPTLELHGRKPMVAY 148
+ E+ +E+ GR+ VA+
Sbjct: 194 VAREQCTGMEIDGRRIRVAF 213
>gi|452987975|gb|EME87730.1| hypothetical protein MYCFIDRAFT_120538, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 179
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L++GN+++ ++ D++D R I + +DV+ + +GQ +GF E S + E
Sbjct: 98 LFIGNMSYQMSDRDLNDLFRQI--RNVLDVRVAIDRRSGQPRGFAHADFVDEASATKAKE 155
Query: 133 RLPTLELHGRKPMVAYPT 150
L ++GR+ V Y T
Sbjct: 156 LLEQKVVYGRQLRVDYST 173
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A + G + ++ K + G+S+GF VT SE++M +E
Sbjct: 11 FVGGLAWATDDRSLEAAFSTYG--EILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A + G + ++ K + G+S+GF VT SE++M +E
Sbjct: 11 FVGGLAWATDDRSLEAAFSTYG--EILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|226502782|ref|NP_001151728.1| ribonucleoprotein A [Zea mays]
gi|195649373|gb|ACG44154.1| ribonucleoprotein A [Zea mays]
gi|414591006|tpg|DAA41577.1| TPA: ribonucleoprotein A [Zea mays]
Length = 268
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S +YVGNL W + + + G +D K + +G+S+GF VT GS + ++
Sbjct: 182 SANKVYVGNLAWGVDNSTLENLFSEQG--QVLDAKVIYDRDSGRSRGFGFVTYGSAQEVN 239
Query: 129 LVMERLPTLELHGRKPMV 146
+ L ++L GR+ V
Sbjct: 240 NAISNLDGIDLDGRQIRV 257
>gi|348522786|ref|XP_003448905.1| PREDICTED: transformer-2 protein homolog alpha-like [Oreochromis
niloticus]
Length = 279
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 104 NRRRHTGSRANPDPSTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVY--DQRTGRSRG 161
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V E MER +EL GR+ V Y
Sbjct: 162 FAFVYFERLEDSKEAMERANGMELDGRRIRVDY 194
>gi|443895166|dbj|GAC72512.1| hypothetical protein PANT_7d00134 [Pseudozyma antarctica T-34]
Length = 301
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIG-VPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+YVGNL+W TT+ ++ A + G + D+I +K + G+S+GF VT ++
Sbjct: 3 AKVYVGNLSWNTTDDSLAHAFSAFGQLTDYIVMK---DRETGRSRGFGFVTFATQGEADA 59
Query: 130 VMERLPTLELHGRKPMV 146
+ L EL GR+ V
Sbjct: 60 AIAALNEQELDGRRIRV 76
>gi|350396363|ref|XP_003484529.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
impatiens]
Length = 314
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 26 TEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--------LYVGN 77
+ ++ D +D+ Q F E G + + SQ S+ N L+VG
Sbjct: 2 ADQENKDFSEDIADQNF-EQNGEAENGGGDAAENGQESQEDRSTGGNQDSLNDRKLFVGG 60
Query: 78 LTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+W TT+ ++ D + G + I+VK + + G+S+GF + ES+ +M
Sbjct: 61 LSWETTDKELRDHFGTYGDIESINVK--TDPNTGRSRGFAFIVFAKAESLDKIM 112
>gi|302814001|ref|XP_002988685.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
gi|300143506|gb|EFJ10196.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
Length = 135
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A + +VG L+W TT+ ++ DA G I+ K + +S+GF VT G E
Sbjct: 2 AAAVDEFRCFVGGLSWATTDRNLEDAFSPYGT--VIEAKVVLDRDTERSRGFGFVTFGDE 59
Query: 125 ESMSLVMERLPTLELHGRKPMVA 147
SM ++ + +L GR V+
Sbjct: 60 NSMQDAIDGMHGKDLDGRSITVS 82
>gi|241627626|ref|XP_002408070.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215501115|gb|EEC10609.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 353
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
T+ L+VG ++W T D+ + GV +DV + + G+S+GF VT ++E
Sbjct: 56 TNEDERKLFVGGISWDTDNKDLREYFSKFGV--VVDVNIKTDPTTGKSRGFGFVTFTAKE 113
Query: 126 SMSLVMERLP 135
++ V++ P
Sbjct: 114 AIEAVLKATP 123
>gi|171912058|ref|ZP_02927528.1| RNA-binding region RNP-1 [Verrucomicrobium spinosum DSM 4136]
Length = 150
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 70 HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+ +YVGNL W TE D+ + G +V + G+ +GF V + ++E+M
Sbjct: 2 NTKMYVGNLAWSATEQDVRELFSQYGA--VTEVSLPTDRDTGRPRGFAFVAMDTKEAMDA 59
Query: 130 VMERLPTLELHGR 142
++ L LE GR
Sbjct: 60 AIKGLNGLEWMGR 72
>gi|156367097|ref|XP_001627256.1| predicted protein [Nematostella vectensis]
gi|156214160|gb|EDO35156.1| predicted protein [Nematostella vectensis]
Length = 86
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
Y+GNL++ E + + D +DVK + G+ +GF VT GS+E M ++
Sbjct: 7 CYIGNLSYSVDEQALEEKFHGC---DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAID 63
Query: 133 RLPTLELHGRKPM 145
+ GR PM
Sbjct: 64 EFDGQDFDGR-PM 75
>gi|393788085|ref|ZP_10376216.1| hypothetical protein HMPREF1068_02496 [Bacteroides nordii
CL02T12C05]
gi|392656298|gb|EIY49937.1| hypothetical protein HMPREF1068_02496 [Bacteroides nordii
CL02T12C05]
Length = 81
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+Y+GNL++ EAD+ + G D VK + +SKGF V + +++ V
Sbjct: 1 MNMYIGNLSYRVKEADLRQVMEEYGTVD--SVKLIIDRDTRKSKGFAFVEMPNDDEAKHV 58
Query: 131 MERLPTLELHGRKPMV 146
+ L E GR +V
Sbjct: 59 ISELNGAEYEGRAMVV 74
>gi|343427628|emb|CBQ71156.1| related to glycine-rich RNA-binding protein [Sporisorium reilianum
SRZ2]
Length = 175
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIG-VPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+YVGNL+W TT+ ++ A + G + D+I +K + G+S+GF VT ++
Sbjct: 3 AKVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMK---DRETGRSRGFGFVTFATQAEADA 59
Query: 130 VMERLPTLELHGRKPMV 146
+ L EL GR+ V
Sbjct: 60 AIAALHDQELDGRRIRV 76
>gi|119357086|ref|YP_911730.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
gi|119354435|gb|ABL65306.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
Length = 90
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPD---FIDVKFFENASNGQSKGFCTVTLGSEESMS 128
N+Y+GNL + +E D+ DA G D I+ KF +G+SKGF + + ++
Sbjct: 2 NIYIGNLAYTVSEDDLRDAFSQFGQVDSANIINDKF-----SGRSKGFGFIEMSNDSEAR 56
Query: 129 LVMERLPTLELHGRKPMV 146
+E + +L GR V
Sbjct: 57 EAIESMNDQDLKGRTIKV 74
>gi|395830899|ref|XP_003788550.1| PREDICTED: transformer-2 protein homolog alpha isoform 1 [Otolemur
garnettii]
gi|194385084|dbj|BAG60948.1| unnamed protein product [Homo sapiens]
Length = 180
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 3 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 60
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 61 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 93
>gi|195571113|ref|XP_002103548.1| GD20486 [Drosophila simulans]
gi|194199475|gb|EDX13051.1| GD20486 [Drosophila simulans]
Length = 345
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 22 EHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--LYVGNLT 79
+ V TE + D DVT G + A + S + S A+ + L+VG L+
Sbjct: 5 KQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGGLS 64
Query: 80 WWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLEL 139
W TTE ++ D G + I+VK + G+S+GF + + E+ +E++ +E
Sbjct: 65 WETTEKELRDHFGKYGEIESINVK--TDPQTGRSRGFAFIVFTNTEA----IEKVSAVEE 118
Query: 140 H 140
H
Sbjct: 119 H 119
>gi|395830901|ref|XP_003788551.1| PREDICTED: transformer-2 protein homolog alpha isoform 2 [Otolemur
garnettii]
gi|395830903|ref|XP_003788552.1| PREDICTED: transformer-2 protein homolog alpha isoform 3 [Otolemur
garnettii]
gi|90083128|dbj|BAE90646.1| unnamed protein product [Macaca fascicularis]
gi|194373917|dbj|BAG62271.1| unnamed protein product [Homo sapiens]
gi|194374591|dbj|BAG62410.1| unnamed protein product [Homo sapiens]
Length = 181
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 3 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 60
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 61 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 93
>gi|195329216|ref|XP_002031307.1| GM25920 [Drosophila sechellia]
gi|194120250|gb|EDW42293.1| GM25920 [Drosophila sechellia]
Length = 345
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 22 EHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--LYVGNLT 79
+ V TE + D DVT G + A + S + S A+ + L+VG L+
Sbjct: 5 KQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGGLS 64
Query: 80 WWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLEL 139
W TTE ++ D G + I+VK + G+S+GF + + E+ +E++ +E
Sbjct: 65 WETTEKELRDHFGKYGEIESINVK--TDPQTGRSRGFAFIVFTNTEA----IEKVSAVEE 118
Query: 140 H 140
H
Sbjct: 119 H 119
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
+S+ L++G +++ T E + +A G + +D + + G+S+GF +T S E
Sbjct: 37 SSAPSTKLFIGGVSYSTDEQSLREAFSKYG--EVVDARIIMDRETGRSRGFGFITYTSVE 94
Query: 126 SMSLVMERLPTLELHGRKPMVAYP 149
S ++ L +LHGR V Y
Sbjct: 95 EASSAIQALDGQDLHGRPIRVNYA 118
>gi|20009|emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]
Length = 292
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYV NL+W T + DA P F+ K + S+G+S+GF +T S E+M +
Sbjct: 207 KLYVANLSWALTSQGLRDAFAD--QPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMKSAL 264
Query: 132 ERL 134
+ +
Sbjct: 265 DTM 267
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL + T + +S+ G +++ + + +S+GF VT+GS E +
Sbjct: 105 LYVGNLPFSMTSSQLSEIFAEAGTVANVEIVY--DRVTDRSRGFAFVTMGSVEEAKEAIR 162
Query: 133 RLPTLELHGRKPMVAYP 149
++ GR V +P
Sbjct: 163 LFDGSQVGGRTVKVNFP 179
>gi|71013156|ref|XP_758559.1| hypothetical protein UM02412.1 [Ustilago maydis 521]
gi|46098217|gb|EAK83450.1| hypothetical protein UM02412.1 [Ustilago maydis 521]
Length = 192
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIG-VPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+YVGNL+W TT+ ++ A + G + D+I +K E G+S+GF VT ++
Sbjct: 3 AKVYVGNLSWNTTDDSLAHAFSTYGQLTDYIVMKDRE---TGRSRGFGFVTFATQAEADA 59
Query: 130 VMERLPTLELHGRKPMV 146
+ L EL GR+ V
Sbjct: 60 AIAALNEQELDGRRIRV 76
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 46 TGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFF 105
T SPA Y+ R S L+VG L++ T E + D + G I+ K
Sbjct: 15 TSSSPALYQSIR---------CMSSSKLFVGGLSYGTDEQSLRDTFANYG--QVIEAKII 63
Query: 106 ENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMV 146
+ G+S+GF +T S E S + L +L GR V
Sbjct: 64 NDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRV 104
>gi|343427629|emb|CBQ71155.1| related to glycine-rich RNA-binding protein [Sporisorium reilianum
SRZ2]
Length = 192
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIG-VPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+YVGNL+W TT+ ++ A + G + D+I +K E G+S+GF VT ++
Sbjct: 3 AKVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRE---TGRSRGFGFVTFATQAEADA 59
Query: 130 VMERLPTLELHGRKPMV 146
+ L EL GR+ V
Sbjct: 60 AIAALHDQELDGRRIRV 76
>gi|307718869|ref|YP_003874401.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
gi|306532594|gb|ADN02128.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
Length = 100
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL + TTE + G + VK + +G SKGF V + SEE+ +
Sbjct: 5 IYVGNLNYQTTEDTLRQLFEQYGEVE--SVKIITDRDSGFSKGFGFVEMSSEEAGEAAIS 62
Query: 133 RLPTLELHGRKPMV 146
L EL GR+ V
Sbjct: 63 ALNQHELEGRQLRV 76
>gi|323304472|gb|EGA58241.1| Ist3p [Saccharomyces cerevisiae FostersB]
gi|323308617|gb|EGA61859.1| Ist3p [Saccharomyces cerevisiae FostersO]
Length = 148
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+Y+GNL TE D+ GVP +DV + + G+S+GF + + S L ++
Sbjct: 33 IYIGNLNRELTEGDILTVFSEYGVP--VDVILSRDENTGESQGFAYLKYEDQRSTILAVD 90
Query: 133 RLPTLELHGRKPMVAY----PTRNVLYQFEA 159
L ++ GR + + P R++ +EA
Sbjct: 91 NLNGFKIGGRALKIDHTFYRPKRSLQKYYEA 121
>gi|291002051|ref|XP_002683592.1| RRM motif-containing protein [Naegleria gruberi]
gi|284097221|gb|EFC50848.1| RRM motif-containing protein [Naegleria gruberi]
Length = 284
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 59 SHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCT 118
S HH + +++ +Y+G L + TE D+ G + +D+ SKGFC
Sbjct: 25 SWHHQEKNRTAY--IYIGGLDFRLTEGDLLSVFSQYG--EIVDIDLVREEQELTSKGFCF 80
Query: 119 VTLGSEESMSLVMERLPTLELHGRKPMV----AYPTRNVLYQFEAQNPLRSRSRRS 170
+ S L ++ L +EL GR V Y + V E QN R+ R S
Sbjct: 81 IAYEDVRSTILAIDNLNGIELGGRIICVDHAPNYYKKIVEDPEEQQNSGRNGGRNS 136
>gi|340729954|ref|XP_003403258.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Bombus
terrestris]
Length = 314
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 27 EHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--------LYVGNL 78
+ ++ D +D+ Q F E G + + SQ S+ N L+VG L
Sbjct: 3 DQENKDFSEDIADQNF-EQNGEAENGGGDATENGQESQEDRSTGGNQDSLNDRKLFVGGL 61
Query: 79 TWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+W TT+ ++ D + G + I+VK + + G+S+GF + ES+ +M
Sbjct: 62 SWETTDKELRDHFGTYGDIESINVK--TDPNTGRSRGFAFIVFAKAESLDKIM 112
>gi|156348369|ref|XP_001621824.1| hypothetical protein NEMVEDRAFT_v1g143489 [Nematostella vectensis]
gi|156208104|gb|EDO29724.1| predicted protein [Nematostella vectensis]
Length = 89
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
Y+GNL++ E + + D +DVK + G+ +GF VT GS+E M ++
Sbjct: 7 CYIGNLSYSVDEQALEEKFHGC---DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAID 63
Query: 133 RLPTLELHGRKPM 145
+ GR PM
Sbjct: 64 EFDGQDFDGR-PM 75
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + A + G + ++ K + G+S+GF VT SE++M +E
Sbjct: 11 FVGGLAWATDNRSLEAAFSTYG--EILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MSGKELDGRNITV 81
>gi|344270299|ref|XP_003406983.1| PREDICTED: transformer-2 protein homolog alpha-like [Loxodonta
africana]
Length = 282
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 104 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 161
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 162 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 194
>gi|148666184|gb|EDK98600.1| RIKEN cDNA G430041M01, isoform CRA_a [Mus musculus]
Length = 281
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 102 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 159
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 160 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 192
>gi|145219698|ref|YP_001130407.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
gi|145205862|gb|ABP36905.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
Length = 90
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+YVGNL + +E D+ DA G + ++ + +G+SKGF V + +++
Sbjct: 1 MNIYVGNLPYTVSEDDLRDAFSEFGQVESANI--IMDKFSGRSKGFGFVEMSDDDAAREA 58
Query: 131 MERLPTLELHGRKPMV 146
+E + + GR MV
Sbjct: 59 IEAMHNKDFMGRSIMV 74
>gi|6322195|ref|NP_012270.1| Ist3p [Saccharomyces cerevisiae S288c]
gi|731908|sp|P40565.1|IST3_YEAST RecName: Full=U2 snRNP component IST3; AltName: Full=Increased
sodium tolerance protein 3; AltName: Full=U2 snRNP
protein SNU17
gi|557854|emb|CAA86207.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270052|gb|AAS56407.1| YIR005W [Saccharomyces cerevisiae]
gi|151943163|gb|EDN61498.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190406218|gb|EDV09485.1| U2 snRNP component IST3 [Saccharomyces cerevisiae RM11-1a]
gi|256274151|gb|EEU09061.1| Ist3p [Saccharomyces cerevisiae JAY291]
gi|259147264|emb|CAY80517.1| Ist3p [Saccharomyces cerevisiae EC1118]
gi|285812652|tpg|DAA08551.1| TPA: Ist3p [Saccharomyces cerevisiae S288c]
gi|323337228|gb|EGA78482.1| Ist3p [Saccharomyces cerevisiae Vin13]
gi|323348164|gb|EGA82418.1| Ist3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354514|gb|EGA86351.1| Ist3p [Saccharomyces cerevisiae VL3]
gi|346228216|gb|AEO21093.1| IST3 [synthetic construct]
gi|349578956|dbj|GAA24120.1| K7_Ist3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765028|gb|EHN06543.1| Ist3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298728|gb|EIW09824.1| Ist3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 148
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+Y+GNL TE D+ GVP +DV + + G+S+GF + + S L ++
Sbjct: 33 IYIGNLNRELTEGDILTVFSEYGVP--VDVILSRDENTGESQGFAYLKYEDQRSTILAVD 90
Query: 133 RLPTLELHGRKPMVAY----PTRNVLYQFEA 159
L ++ GR + + P R++ +EA
Sbjct: 91 NLNGFKIGGRALKIDHTFYRPKRSLQKYYEA 121
>gi|345489601|ref|XP_001600266.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Nasonia vitripennis]
Length = 376
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W TT+ ++ G + ID +N+ +G+S+GF VT ++ LV++
Sbjct: 15 LFVGGLSWETTQENLQRYFSRYG--EVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQ 72
Query: 133 RLPTLELHGR 142
P +L GR
Sbjct: 73 NGPH-QLDGR 81
>gi|195972819|ref|NP_001124409.1| transformer-2 protein homolog alpha [Ovis aries]
gi|193245518|gb|ACF16977.1| TRA2A [Ovis aries]
Length = 281
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 104 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 161
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 162 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 194
>gi|2331131|gb|AAB66884.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 162
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A + G + +D K + G+S GF +T SE+SM +E
Sbjct: 11 FVGGLAWATDDRSLEAAFSTYG--EILDSKIINDRETGRSLGFGFITFSSEQSMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L++G L++ + + DA S G + ++ + + G+S+GF V S+ES +
Sbjct: 34 SSSKLFIGGLSYGVDDQSLKDAFASYG--EVVEARVITDRDTGRSRGFGFVNFTSDESAT 91
Query: 129 LVMERLPTLELHGRKPMVAYP 149
+ + +L+GR V+Y
Sbjct: 92 SALSAMDGQDLNGRNIRVSYA 112
>gi|78186885|ref|YP_374928.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78166787|gb|ABB23885.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 90
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+YVGNL + +E D+ DA G + + +G+SKGF V + +++
Sbjct: 1 MNIYVGNLPYTISEDDLRDAFSEFG--EVASANIITDKFSGRSKGFGFVEMPDDDAAREA 58
Query: 131 MERLPTLELHGRKPMV 146
+E + + GR MV
Sbjct: 59 IESMHNKDFKGRSIMV 74
>gi|398810917|ref|ZP_10569726.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398081873|gb|EJL72641.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 134
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVGNL + + D+ A G + K G+SKGF V +GS+ +
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGA--IVSAKVMMERDTGRSKGFGFVEMGSDAEALAAI 61
Query: 132 ERLPTLELHGR-------KPMVAYPTR 151
E + L GR +PM A P R
Sbjct: 62 EAMNGHSLQGRALTVNEARPMEARPPR 88
>gi|319791037|ref|YP_004152677.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315593500|gb|ADU34566.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 138
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVGNL + + D+ A G + K G+SKGF V +GS+ +
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGA--IVSAKVMMERDTGRSKGFGFVEMGSDAEALAAI 61
Query: 132 ERLPTLELHGR-------KPMVAYPTR 151
E + L GR +PM A P R
Sbjct: 62 EAMNGHSLQGRALTVNEARPMEARPPR 88
>gi|399108266|gb|AFP20557.1| RNA-binding protein [uncultured bacterium]
Length = 114
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL + T A++ + G + V + GQSKGF V +GS + M
Sbjct: 5 LYVGNLNYRTNSAELEQLFAAYGTVKSVQV--ISDRHTGQSKGFGFVEMGSAQEAQAAMN 62
Query: 133 RLPTLELHGRKPMV 146
L + +GR V
Sbjct: 63 ALNGKDFNGRNLTV 76
>gi|224009309|ref|XP_002293613.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971013|gb|EED89349.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 189
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 45 HTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKF 104
H G R H S+ + + C L+VGNL+W T ++ D R G D +V
Sbjct: 86 HGGGGFNNQRSHNTSYMQG-SPAEEGCQLFVGNLSWETGWRELKDHFRQCGEVDRAEVA- 143
Query: 105 FENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGR 142
++G+ +GF V S + + +L ++ GR
Sbjct: 144 --EGNDGRKRGFGLVRFHSAKDAQAAIRKLNGVDFMGR 179
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL+W T D+ D +++ G D + + +G+SKG V S E + +E
Sbjct: 2 VYVGNLSWSTGWRDLKDHMKACG--DVLRADIMQ-THDGRSKGCGIVEYSSPEEAARAVE 58
Query: 133 RLPTLELHGRKPMV 146
L EL GR+ V
Sbjct: 59 ELNNSELSGRQIFV 72
>gi|194766221|ref|XP_001965223.1| GF24033 [Drosophila ananassae]
gi|190617833|gb|EDV33357.1| GF24033 [Drosophila ananassae]
Length = 339
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
+S HC L++G+L + TE + A R +G D V+ N G+ G+C V S++
Sbjct: 2 ASVHCQLWMGSLESYMTENFIIAAFRKMG-EDPTTVRLMRNKYTGEPAGYCFVNFISDDH 60
Query: 127 MSLVMERLPTLELHGRKPMVAY 148
M +L + G P+V +
Sbjct: 61 ALDAMHKLNGKPIPGTNPIVRF 82
>gi|148666187|gb|EDK98603.1| RIKEN cDNA G430041M01, isoform CRA_d [Mus musculus]
Length = 302
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 122 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 179
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 180 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 212
>gi|148666186|gb|EDK98602.1| RIKEN cDNA G430041M01, isoform CRA_c [Mus musculus]
Length = 300
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 122 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 179
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 180 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 212
>gi|430813000|emb|CCJ29603.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 327
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
LY+G + WW ++ D+ + + G+ + D+ F E+ NG+SKG V + ++ + V
Sbjct: 101 LYLGEMNWWNSDEDIRNVVLEAGIDCELKDITFNEHKVNGKSKGIAFVEFTTPQAATAV 159
>gi|114052084|ref|NP_001039845.1| transformer-2 protein homolog alpha [Bos taurus]
gi|345780251|ref|XP_539475.3| PREDICTED: transformer-2 protein homolog alpha isoform 1 [Canis
lupus familiaris]
gi|410952462|ref|XP_003982899.1| PREDICTED: transformer-2 protein homolog alpha [Felis catus]
gi|86821769|gb|AAI05490.1| Transformer 2 alpha homolog (Drosophila) [Bos taurus]
gi|296488601|tpg|DAA30714.1| TPA: transformer-2 alpha [Bos taurus]
Length = 281
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 104 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 161
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 162 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 194
>gi|51701959|sp|Q6PFR5.1|TRA2A_MOUSE RecName: Full=Transformer-2 protein homolog alpha; Short=TRA-2
alpha; Short=TRA2-alpha; AltName: Full=Transformer-2
protein homolog A
gi|34785414|gb|AAH57448.1| Transformer 2 alpha homolog (Drosophila) [Mus musculus]
Length = 281
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 102 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 159
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 160 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 192
>gi|384946690|gb|AFI36950.1| transformer-2 protein homolog alpha [Macaca mulatta]
Length = 280
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 104 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 161
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 162 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 194
>gi|355560756|gb|EHH17442.1| Transformer-2 protein-like protein alpha, partial [Macaca mulatta]
gi|355747772|gb|EHH52269.1| Transformer-2 protein-like protein alpha, partial [Macaca
fascicularis]
Length = 279
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 104 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 161
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 162 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 194
>gi|301771922|ref|XP_002921381.1| PREDICTED: hypothetical protein LOC100480496 [Ailuropoda
melanoleuca]
Length = 281
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 104 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 161
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 162 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 194
>gi|225453602|ref|XP_002264834.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Vitis
vinifera]
gi|296088998|emb|CBI38701.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+++G L E D+ D IG + ++V+ +N +G+SKG+ ++ ++E +E
Sbjct: 103 IFIGGLPREALEEDLRDLCEPIG--EALEVRLMKNRDSGESKGYAFISFKTKEIAQKAIE 160
Query: 133 RLPTLELHGR 142
L + E GR
Sbjct: 161 ELHSKEFKGR 170
>gi|116175271|ref|NP_001070691.1| transformer-2 protein homolog alpha [Sus scrofa]
gi|115371739|gb|ABI96194.1| TRA2A [Sus scrofa]
Length = 279
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 104 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 161
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 162 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 194
>gi|111160869|ref|NP_932770.2| transformer-2 protein homolog alpha [Mus musculus]
gi|171846642|gb|AAI61978.1| Tra2a protein [Rattus norvegicus]
Length = 282
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 102 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 159
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 160 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 192
>gi|9558733|ref|NP_037425.1| transformer-2 protein homolog alpha [Homo sapiens]
gi|281182542|ref|NP_001162359.1| transformer-2 protein homolog alpha [Papio anubis]
gi|384475793|ref|NP_001245042.1| transformer-2 protein homolog alpha [Macaca mulatta]
gi|114612370|ref|XP_001158245.1| PREDICTED: transformer-2 protein homolog alpha-like isoform 3 [Pan
troglodytes]
gi|297680857|ref|XP_002818189.1| PREDICTED: transformer-2 protein homolog alpha-like [Pongo abelii]
gi|332242557|ref|XP_003270451.1| PREDICTED: transformer-2 protein homolog alpha [Nomascus
leucogenys]
gi|403287930|ref|XP_003935172.1| PREDICTED: transformer-2 protein homolog alpha [Saimiri boliviensis
boliviensis]
gi|426355642|ref|XP_004045221.1| PREDICTED: transformer-2 protein homolog alpha-like [Gorilla
gorilla gorilla]
gi|4033480|sp|Q13595.1|TRA2A_HUMAN RecName: Full=Transformer-2 protein homolog alpha; Short=TRA-2
alpha; Short=TRA2-alpha; AltName: Full=Transformer-2
protein homolog A
gi|1256837|gb|AAC50658.1| transformer-2 alpha [Homo sapiens]
gi|16877711|gb|AAH17094.1| Transformer 2 alpha homolog (Drosophila) [Homo sapiens]
gi|31455551|dbj|BAC77401.1| putative MAPK activating protein [Homo sapiens]
gi|37674420|gb|AAQ96870.1| unknown [Homo sapiens]
gi|119614194|gb|EAW93788.1| transformer-2 alpha, isoform CRA_a [Homo sapiens]
gi|123983254|gb|ABM83368.1| transformer-2 alpha [synthetic construct]
gi|123997955|gb|ABM86579.1| transformer-2 alpha [synthetic construct]
gi|160904205|gb|ABX52190.1| transformer-2 alpha (predicted) [Papio anubis]
gi|189054556|dbj|BAG37329.1| unnamed protein product [Homo sapiens]
gi|261860348|dbj|BAI46696.1| transformer 2 alpha homolog [synthetic construct]
gi|351705767|gb|EHB08686.1| Transformer-2 protein-like protein alpha [Heterocephalus glaber]
gi|383417837|gb|AFH32132.1| transformer-2 protein homolog alpha [Macaca mulatta]
gi|384946688|gb|AFI36949.1| transformer-2 protein homolog alpha [Macaca mulatta]
gi|410214134|gb|JAA04286.1| transformer 2 alpha homolog [Pan troglodytes]
gi|410214136|gb|JAA04287.1| transformer 2 alpha homolog [Pan troglodytes]
gi|410249156|gb|JAA12545.1| transformer 2 alpha homolog [Pan troglodytes]
gi|410249158|gb|JAA12546.1| transformer 2 alpha homolog [Pan troglodytes]
gi|410300572|gb|JAA28886.1| transformer 2 alpha homolog [Pan troglodytes]
Length = 282
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 104 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 161
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 162 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 194
>gi|390432205|gb|AFL91694.1| glycine-rich RNA binding protein [Raphanus sativus var.
raphanistroides]
Length = 153
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A++ +VG L W T + + A G D +D K + G+S+GF VT E
Sbjct: 2 ASADVEYRCFVGGLAWATDDRALETAFSQYG--DVLDSKIINDRETGRSRGFGFVTFKDE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
+SM +E + +L GR V
Sbjct: 60 KSMRDAIEAMNGQDLDGRSITV 81
>gi|387861093|gb|AFK08576.1| glycine-rich RNA binding protein 2a [Camelina sativa]
gi|387861099|gb|AFK08579.1| glycine-rich RNA binding protein 2a [Camelina sativa]
Length = 160
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T + + DA G + +D K + G+S+GF V E + S +
Sbjct: 38 LFVGGLSWGTDDQSLRDAFAHFG--EVVDAKVIVDRETGRSRGFGFVNFSDETAASAAIS 95
Query: 133 RLPTLELHGRKPMV 146
+ +L+GR V
Sbjct: 96 EMDGKDLNGRNIRV 109
>gi|397472988|ref|XP_003808009.1| PREDICTED: transformer-2 protein homolog alpha [Pan paniscus]
Length = 297
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 104 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 161
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 162 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 194
>gi|387019387|gb|AFJ51811.1| Transformer-2 protein [Crotalus adamanteus]
Length = 187
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 57 RYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGF 116
R H ++A +C L V L+ +TTE D+ + G DV + + +S+GF
Sbjct: 4 RRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGP--IADVSIVYDQQSRRSRGF 61
Query: 117 CTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
V S + ER +EL GR+ V +
Sbjct: 62 AFVYFESVDDAKEAKERANGMELDGRRIRVDF 93
>gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S S +YVGNL W ++ + + G +D K + G+S+GF VT+ S+E
Sbjct: 206 SGSSFRIYVGNLPWQVDDSRLVELFSEHG--KVVDAKVVYDRDTGRSRGFGFVTMASQEE 263
Query: 127 MSLVMERLPTLELHGR 142
+ + L L GR
Sbjct: 264 LDDAIAALDGQSLEGR 279
>gi|195388164|ref|XP_002052753.1| GJ17734 [Drosophila virilis]
gi|194149210|gb|EDW64908.1| GJ17734 [Drosophila virilis]
Length = 345
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
+S HC L++G+L + TE + A R +G D V+ N G+ G+C V S++
Sbjct: 2 TSVHCQLWMGSLESYMTENFIIAAFRKMG-EDPTTVRLMRNKYTGEPAGYCFVNFISDDH 60
Query: 127 MSLVMERLPTLELHGRKPMVAY 148
M +L + G P+V +
Sbjct: 61 ALDAMHKLNGKPIPGTNPIVRF 82
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
LYVG+L + TE+D+ G +F+D+ + G+SKG+ V E +
Sbjct: 118 MQLYVGSLHFNLTESDIKQVFEPFGELEFVDLH--RDPMTGRSKGYAFVQYKRAEDAKMA 175
Query: 131 MERLPTLELHGR 142
+E++ EL GR
Sbjct: 176 LEQMEGFELAGR 187
>gi|194856103|ref|XP_001968677.1| GG24374 [Drosophila erecta]
gi|190660544|gb|EDV57736.1| GG24374 [Drosophila erecta]
Length = 336
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
+S HC L++G+L + TE + A R +G D V+ N G+ G+C V S++
Sbjct: 2 ASVHCQLWMGSLESYMTENFIIAAFRKMG-EDPTTVRLMRNKYTGEPAGYCFVNFISDDH 60
Query: 127 MSLVMERLPTLELHGRKPMVAY 148
M +L + G P+V +
Sbjct: 61 ALDAMHKLNGKPIPGTNPIVRF 82
>gi|110758129|ref|XP_392465.3| PREDICTED: RNA-binding protein squid-like isoform 1 [Apis
mellifera]
Length = 358
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 26 TEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--------LYVGN 77
+ ++ D +D+ Q F E G + + SQ S+ N L+VG
Sbjct: 2 ADQENKDFSEDIADQNF-EQNGEAENGGGDAAENGQESQEERSTGGNQDSLNDRKLFVGG 60
Query: 78 LTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+W TT+ ++ D + G + I+VK + + G+S+GF + ES+ +M
Sbjct: 61 LSWETTDKELRDHFGTYGDIESINVK--TDPNTGRSRGFAFIVFAKAESLDKIM 112
>gi|18103931|emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A + G + ++ K + G+S+GF VT SE++M +E
Sbjct: 11 FVGGLAWATDDRSLEAAFSTYG--EILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|407033602|gb|EKE36900.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 136
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+G+L + T+ + A G D K + + +SKGF VT +E +E
Sbjct: 4 LYIGSLAYSVTDESLKAAFEKFGT--VTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIE 61
Query: 133 RLPTLELHGRKPMV 146
+ EL GR+ V
Sbjct: 62 EMNEQELEGRRIKV 75
>gi|440901501|gb|ELR52432.1| Transformer-2 protein-like protein alpha, partial [Bos grunniens
mutus]
Length = 281
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 104 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 161
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 162 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 194
>gi|345489599|ref|XP_003426177.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Nasonia vitripennis]
Length = 445
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W TT+ ++ G + ID +N+ +G+S+GF VT ++ LV++
Sbjct: 15 LFVGGLSWETTQENLQRYFSRYG--EVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQ 72
Query: 133 RLPTLELHGR 142
P +L GR
Sbjct: 73 NGPH-QLDGR 81
>gi|148666185|gb|EDK98601.1| RIKEN cDNA G430041M01, isoform CRA_b [Mus musculus]
Length = 270
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 90 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 147
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 148 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 180
>gi|452851903|ref|YP_007493587.1| RNP-1 like RNA-binding protein [Desulfovibrio piezophilus]
gi|451895557|emb|CCH48436.1| RNP-1 like RNA-binding protein [Desulfovibrio piezophilus]
Length = 87
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
NLYVGNL+W TTE ++ A G + + VK E+ G+ +GF V + + +
Sbjct: 4 NLYVGNLSWSTTEDEVRAAFAEFG--EVLSVKLIEDRETGRPRGFGFVEM-DDNGAGDAV 60
Query: 132 ERLPTLELHGR--KPMVAYP 149
+ L +L GR K VA P
Sbjct: 61 DALDGKDLGGRNIKVNVAKP 80
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGN+ + TE D+ G +F+ ++ E NG+S+G+ V +E
Sbjct: 279 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDE---NGRSRGYGFVQFRDAGQAREALE 335
Query: 133 RLPTLELHGRKPMVAY--------PTRNVLYQFEAQN 161
++ +L GR V T N+L +F QN
Sbjct: 336 KMNGFDLAGRPIRVGLGNDKFTPESTANMLQRFSGQN 372
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVG+L + +E+D+ G +F+D+ + G+SKG+ V E + +
Sbjct: 399 QLYVGSLHFNLSESDIKQVFEPFGELEFVDL--HRDPVTGRSKGYAFVQYKRAEDAKMAL 456
Query: 132 ERLPTLELHGR 142
E++ EL GR
Sbjct: 457 EQMDGFELAGR 467
>gi|2293480|gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group]
Length = 161
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A + G + ++ K + G+S+GF VT SE++M +E
Sbjct: 11 FVGGLAWATDDRSLEAAFSTYG--EILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|383851135|ref|XP_003701095.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Megachile
rotundata]
Length = 362
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 26 TEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--------LYVGN 77
+ ++ D +D+ Q F E G + + SQ S+ N L+VG
Sbjct: 2 ADQENKDFSEDIADQNF-EQNGEAENGGGDAAENGQESQEDRSTGGNQDSLNDRKLFVGG 60
Query: 78 LTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+W TT+ ++ D + G + I+VK + + G+S+GF + ES+ +M
Sbjct: 61 LSWETTDKELRDHFGTYGDIESINVK--TDPNTGRSRGFAFIVFAKAESLDKIM 112
>gi|119358437|ref|YP_913081.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
gi|119355786|gb|ABL66657.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
Length = 90
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+Y+GNL + TE D+ DA G D ++ + +G+SKGF V + ++
Sbjct: 1 MNIYIGNLPYQVTEDDLRDAFSQFGQVDSANI--ITDKFSGRSKGFGFVDMPHDDEAREA 58
Query: 131 MERLPTLELHGRKPMV 146
+E + +L GR V
Sbjct: 59 IESMNDKDLKGRTIKV 74
>gi|340384626|ref|XP_003390812.1| PREDICTED: nucleolar protein 12-like, partial [Amphimedon
queenslandica]
Length = 224
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
T+ +HC+++VGN+ + E + S G D ++ ++ G +KGF V
Sbjct: 81 TNDTHCSVFVGNVPFGADEEKLRKVFESCGPID--GIRIIKDTRTGINKGFAYVKFKDSS 138
Query: 126 SMSLVMERLPTLELHGRKPMV 146
S+ ++ +E+ GRK V
Sbjct: 139 SVLFACKKNERIEVEGRKLRV 159
>gi|417409216|gb|JAA51125.1| Putative translation initiation factor 3 subunit g eif-3g, partial
[Desmodus rotundus]
Length = 269
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 92 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 149
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 150 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 182
>gi|388500434|gb|AFK38283.1| unknown [Lotus japonicus]
Length = 273
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
SS + LY GNL + A ++ I G + I+V + + +G+S+GF VT+ E
Sbjct: 97 SSVNTKLYFGNLPYSVDSAQLAGLIEEYGSAELIEVLY--DRDSGKSRGFAFVTMSCVED 154
Query: 127 MSLVMERLPTLELHGR 142
+ V+E L E GR
Sbjct: 155 CNTVIENLDGKEFLGR 170
>gi|355725835|gb|AES08679.1| transformer 2 alpha-like protein [Mustela putorius furo]
Length = 267
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 91 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 148
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 149 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 181
>gi|367034680|ref|XP_003666622.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
gi|347013895|gb|AEO61377.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
Length = 575
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 11/118 (9%)
Query: 52 RYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNG 111
+ R R S S LYVGN+ + TE D+ + G +F+ + + +G
Sbjct: 273 KNRQARNSESSGHPNSIPFHRLYVGNIHFSITETDLQNVFEPFGELEFVQL---QKDDSG 329
Query: 112 QSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAY--------PTRNVLYQFEAQN 161
+S+G+ V +E++ +L GR V T N+L F+ QN
Sbjct: 330 RSRGYGFVQFRDASQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLLRGFQGQN 387
>gi|328858559|gb|EGG07671.1| hypothetical protein MELLADRAFT_71659 [Melampsora larici-populina
98AG31]
Length = 163
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
S+ L+VGNL W T ++ A G + +D ++ G+S+GF +T +++
Sbjct: 2 SAGNKLFVGNLAWSTDTNSLTQAFNQYG--EVVDAIVMQDRETGRSRGFGFITFSNQDQA 59
Query: 128 SLVMERLPTLELHGRKPMVAYPT 150
++ L ++ GR V + T
Sbjct: 60 QAAIDALNEADVDGRNIRVNFAT 82
>gi|195113435|ref|XP_002001273.1| GI10695 [Drosophila mojavensis]
gi|193917867|gb|EDW16734.1| GI10695 [Drosophila mojavensis]
Length = 342
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 22 EHVSTEHDDIDLYDDVTLQPF--PEHTGRSPARYRHHRYSHHHSQATSSSHCN--LYVGN 77
+ V +E + D DVT PE+ +PA + S + + A++ + L+VG
Sbjct: 4 KQVDSEMNGEDFTKDVTTNDVASPENGESTPAAGAANGSSENTAPASNQRDDDRKLFVGG 63
Query: 78 LTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
L+W TTE ++ D G + I+VK + G+S+GF + + E++ V
Sbjct: 64 LSWETTEKELRDHFGKFGEIESINVK--TDPQTGRSRGFAFIVFTNTEAIDQV 114
>gi|195035701|ref|XP_001989310.1| GH11659 [Drosophila grimshawi]
gi|193905310|gb|EDW04177.1| GH11659 [Drosophila grimshawi]
Length = 364
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
+S HC L++G+L + TE + A R +G D V+ N G+ G+C V S++
Sbjct: 2 TSVHCQLWMGSLEPYMTENFIIAAFRKMG-EDPTTVRLMRNKYTGEPAGYCFVNFISDDH 60
Query: 127 MSLVMERLPTLELHGRKPMVAY 148
M +L + G P+V +
Sbjct: 61 ALDAMHKLNGKHIPGTNPIVRF 82
>gi|383142219|gb|AFG52469.1| Pinus taeda anonymous locus CL931Contig1_02 genomic sequence
Length = 85
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
S+ ++VGNL W A++++ + G D V+ + G+S+GF VT+ ++E
Sbjct: 14 SADIKVFVGNLPWSVDSAELAELFKDPG--DVTMVEVIYDRQTGRSRGFAFVTMATQEDA 71
Query: 128 SLVMERLPTLELHG 141
+E+L E G
Sbjct: 72 DSAVEKLNGYEYQG 85
>gi|347841962|emb|CCD56534.1| hypothetical protein [Botryotinia fuckeliana]
Length = 403
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + L WW T+ D+ I V D + D+ F E+ NG+SKG V S+++ + V
Sbjct: 117 LLISELHWWNTDDDIRGWINQAQVEDELKDMTFSEHKVNGKSKGQAYVEFTSQQAATAVK 176
Query: 132 ERLPTL-ELHG--RKPMVAYPTRNVLYQFEAQNPLRS 165
++ E H +K VA+ NV NP R+
Sbjct: 177 RKIDAFGEGHQYVKKQTVAFHNPNV-------NPFRT 206
>gi|344276873|ref|XP_003410230.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Loxodonta
africana]
Length = 303
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 62 HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
HSQ SS +++G L + TE D+ G + +++ N G+SKGFC +
Sbjct: 29 HSQYKDSSW--IFLGGLPYELTEGDILCVFSQYG--EIVNINLVRNRKTGKSKGFCFICY 84
Query: 122 GSEESMSLVMERLPTLELHGR 142
+ S L ++ +++ GR
Sbjct: 85 EDQRSTVLAVDNFNGIKIKGR 105
>gi|118474079|ref|YP_892397.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|424821065|ref|ZP_18246103.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
gi|118413305|gb|ABK81725.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|342327844|gb|EGU24328.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
Length = 82
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+YVGNL++ TE+++ + S G + K ++ +SKGF V + S+E
Sbjct: 2 INIYVGNLSYRMTESELREVFSSFG--EVTRAKIVKDKETNRSKGFGFVEMSSDEQAKKA 59
Query: 131 MERLPTLELHGR 142
+E E+ GR
Sbjct: 60 IEGTNGKEVGGR 71
>gi|148235297|ref|NP_001085979.1| MGC82977 protein [Xenopus laevis]
gi|49118619|gb|AAH73641.1| MGC82977 protein [Xenopus laevis]
Length = 276
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H+ S+A + + V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 97 NRRRHNGSRANPDPNICVGVFGLSLYTTERDLREVFSRYGPLSSVNVVY--DQRTGRSRG 154
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V E ME + +EL GRK V Y
Sbjct: 155 FAFVYFERMEDSREAMEHVNGMELDGRKLRVDY 187
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGN+ + TE D+ G +F+ ++ E NG+S+G+ V +E
Sbjct: 279 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDE---NGRSRGYGFVQFRDAGQAREALE 335
Query: 133 RLPTLELHGRKPMVAY--------PTRNVLYQFEAQN 161
++ +L GR V T N+L +F QN
Sbjct: 336 KMNGFDLAGRPIRVGLGNDKFTPESTANMLQRFSGQN 372
>gi|356537206|ref|XP_003537120.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 298
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 50 PARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENAS 109
P R + ++ S H +Y GNL W T D+ DA P F+ K +
Sbjct: 167 PKRGKRLVMGSNYRGFVDSPH-KIYAGNLGWGLTSQDLRDAFAE--QPGFLSAKVIYERN 223
Query: 110 NGQSKGFCTVTLGSEESMSLVMERLPTLELHGR 142
+G+S+G+ V+ + E + + + +E+ GR
Sbjct: 224 SGRSRGYGFVSFETAEDVEAALNSMNGVEVQGR 256
>gi|257043450|gb|ACV33079.1| glycine-rich RNA-binding protein [Limonium bicolor]
Length = 140
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S L++G L+W T + + DA S G D + + + + G+S+GF V ES S
Sbjct: 33 SSSKLFIGGLSWGTDDQSLKDAFASFG--DVTEARVIMDRNTGKSRGFGFVEYNDTESAS 90
Query: 129 LVMERLPTLELHGRKPMVAYPT 150
M + EL+GR V+Y T
Sbjct: 91 SAMSSMDGQELNGRNIRVSYAT 112
>gi|125544079|gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
Length = 265
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 45 HTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKF 104
++G P R + R +A +YVGNL+W A +++ G + ++ K
Sbjct: 160 NSGPPPPREQSSR------RAPRGEANRVYVGNLSWGVDNAALANLFSGEG--EVLEAKV 211
Query: 105 FENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRK 143
+ +G+S+GF VT GS E + + L ++ GR+
Sbjct: 212 IYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQ 250
>gi|147906061|ref|NP_001079913.1| RNA binding motif protein, X-linked 2 [Xenopus laevis]
gi|34783857|gb|AAH56844.1| MGC64376 protein [Xenopus laevis]
Length = 272
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+++G L + TE D+ G + +++ + S+G+S+GFC V + S L ++
Sbjct: 38 IFIGGLPFELTEGDVICVFSQYG--EVVNINLARDKSSGRSRGFCFVCFEDQRSTVLAVD 95
Query: 133 RLPTLELHGR 142
L ++L GR
Sbjct: 96 NLNGIKLKGR 105
>gi|12230584|sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor
gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL W + + G +D K + +G+S+GF VT S E ++ +E
Sbjct: 190 VYVGNLAWGVDQDALETLFSEQG--KVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIE 247
Query: 133 RLPTLELHGR----KPMVAYPTR 151
L ++L+GR P A P R
Sbjct: 248 SLDGVDLNGRAIRVSPAEARPPR 270
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
S ++VGNL + A +++ G + ++V + + G+S+GF VT+ S+E +
Sbjct: 84 SPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIY--DKLTGRSRGFGFVTMSSKEEV 141
Query: 128 SLVMERLPTLELHGR 142
++ EL GR
Sbjct: 142 EAACQQFNGYELDGR 156
>gi|357152395|ref|XP_003576105.1| PREDICTED: uncharacterized protein LOC100823193 [Brachypodium
distachyon]
Length = 267
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S ++VG L++ T E + +A G D ID K + + +S+GF +T +E+
Sbjct: 29 SSSKIFVGGLSYNTDETGLREAFTHYG--DIIDAKIIVDHESRRSRGFGFITYAAEDQAK 86
Query: 129 LVMERLPTLELHGRKPMVA 147
+ L ELHGR V+
Sbjct: 87 AAIMALDGKELHGRNIRVS 105
>gi|398396806|ref|XP_003851861.1| hypothetical protein MYCGRDRAFT_104845 [Zymoseptoria tritici
IPO323]
gi|339471741|gb|EGP86837.1| hypothetical protein MYCGRDRAFT_104845 [Zymoseptoria tritici
IPO323]
Length = 498
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++V NL W T+ D+ + ++IG D ++++ +NG+S+G V GS+ + +E
Sbjct: 403 IHVKNLPWSTSNDDLVELFQTIGTVDRAEIQY---EANGRSRGAGVVQFGSQGDAATAIE 459
Query: 133 RLPTLELHGR 142
+ GR
Sbjct: 460 KFQGYSYGGR 469
>gi|225561416|gb|EEH09696.1| RNA splicing factor Pad-1 [Ajellomyces capsulatus G186AR]
Length = 584
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGN+ + TE+D+ G DF+ ++ E G+S+G+ V +E
Sbjct: 291 LYVGNIHFSITESDLQKVFEPFGELDFVQLQKEE---GGRSRGYGFVQFRDPNQAREALE 347
Query: 133 RLPTLELHGRKPMVAY--------PTRNVLYQFEAQ 160
++ +L GR V T N+L +F+ Q
Sbjct: 348 KMNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQ 383
>gi|224138144|ref|XP_002326529.1| predicted protein [Populus trichocarpa]
gi|222833851|gb|EEE72328.1| predicted protein [Populus trichocarpa]
Length = 294
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+V NL W + D+ D G DV+ + NG+S+GF VT+ + E +
Sbjct: 95 KLFVVNLPWSFSVVDIKDLFGQCGTVS--DVEIIKQ-KNGRSRGFAFVTMTTGEEAQAAI 151
Query: 132 ERLPTLELHGRKPMVAYPTR 151
++ +LE+ GR V + R
Sbjct: 152 DKFNSLEVSGRIIRVEFAKR 171
>gi|154282581|ref|XP_001542086.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
gi|150410266|gb|EDN05654.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
Length = 585
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGN+ + TE+D+ G DF+ ++ E G+S+G+ V +E
Sbjct: 292 LYVGNIHFSITESDLQKVFEPFGELDFVQLQKEE---GGRSRGYGFVQFRDPNQAREALE 348
Query: 133 RLPTLELHGRKPMVAY--------PTRNVLYQFEAQ 160
++ +L GR V T N+L +F+ Q
Sbjct: 349 KMNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQ 384
>gi|325090859|gb|EGC44169.1| RNA splicing factor [Ajellomyces capsulatus H88]
Length = 585
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGN+ + TE+D+ G DF+ ++ E G+S+G+ V +E
Sbjct: 292 LYVGNIHFSITESDLQKVFEPFGELDFVQLQKEE---GGRSRGYGFVQFRDPNQAREALE 348
Query: 133 RLPTLELHGRKPMVAY--------PTRNVLYQFEAQ 160
++ +L GR V T N+L +F+ Q
Sbjct: 349 KMNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQ 384
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGN+ + TE D+ G +F+ ++ E NG+S+G+ V +E
Sbjct: 279 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDE---NGRSRGYGFVQFRDAGQAREALE 335
Query: 133 RLPTLELHGRKPMVAY--------PTRNVLYQFEAQN 161
++ +L GR V T N+L +F QN
Sbjct: 336 KMNGFDLAGRPIRVGLGNDKFTPESTANMLQRFSGQN 372
>gi|428173305|gb|EKX42208.1| hypothetical protein GUITHDRAFT_111772 [Guillardia theta CCMP2712]
Length = 156
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENA-SNGQSKGFCTVTLGSEE 125
++ C +YVGN+ E + + G D +F + GQ +G C + S E
Sbjct: 21 GNAECRVYVGNMDPRLNEGAIVKLFQQFGKLKRCDYLWFTSGPRRGQPRGICFLEFESAE 80
Query: 126 SMSLVMERLPTLELHGRKPMV 146
+ R+ ELHGRK +V
Sbjct: 81 GAEKAIARMNGKELHGRKIIV 101
>gi|387861097|gb|AFK08578.1| glycine-rich RNA binding protein 2c [Camelina sativa]
gi|387861103|gb|AFK08581.1| glycine-rich RNA binding protein 2c [Camelina sativa]
Length = 158
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T +A + DA G + +D K + G+ +GF V E + S +
Sbjct: 38 LFVGGLSWGTDDASLRDAFAHFG--EVVDAKVIVDRETGRPRGFGFVNFSDETAASAAIS 95
Query: 133 RLPTLELHGRKPMV 146
+ +L+GR V
Sbjct: 96 EMDGKDLNGRNIRV 109
>gi|74096251|ref|NP_001027768.1| glycine rich RNA binding protein [Ciona intestinalis]
gi|5911800|emb|CAB56042.1| glycine rich RNA binding protein [Ciona intestinalis]
Length = 162
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
++C ++VGNL++ TE D+ G + +V + G+S+GF VT SE +
Sbjct: 2 ANCKVFVGNLSYNATEDDLRKHFSGSGQVE--EVAIICDRETGRSRGFAFVTFSSEGEAN 59
Query: 129 LVMERLPTLELHGRKPMV 146
+E L ++ GR V
Sbjct: 60 DAIENLNESDVRGRNVSV 77
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + A + G + ++ K + G+S+GF VT SE++M +E
Sbjct: 11 FVGGLAWATDNRSLEAAFSTYG--EILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ EL GR V
Sbjct: 69 MNGKELDGRNITV 81
>gi|395540434|ref|XP_003772160.1| PREDICTED: transformer-2 protein homolog alpha [Sarcophilus
harrisii]
Length = 272
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 94 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 151
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 152 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 184
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 142
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
+YVGNL+W TT+ + A G + +D + G+S+GF VT + E
Sbjct: 3 AKVYVGNLSWNTTDDSLRQAFSQYG--NVLDSIVMRDRDTGRSRGFGFVTYSATEEADAA 60
Query: 131 MERLPTLELHGRKPMV 146
+ L EL GR+ V
Sbjct: 61 IASLHDQELDGRRIKV 76
>gi|195159506|ref|XP_002020619.1| GL15405 [Drosophila persimilis]
gi|198475233|ref|XP_001356977.2| GA13731 [Drosophila pseudoobscura pseudoobscura]
gi|194117569|gb|EDW39612.1| GL15405 [Drosophila persimilis]
gi|198138730|gb|EAL34043.2| GA13731 [Drosophila pseudoobscura pseudoobscura]
Length = 339
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
+S HC L++G+L + TE + A R +G D V+ N G+ G+C V S++
Sbjct: 2 TSVHCQLWMGSLESYMTENFIIAAFRKMG-EDPTTVRLMRNKYTGEPAGYCFVNFISDDH 60
Query: 127 MSLVMERLPTLELHGRKPMVAY 148
M +L + G P+V +
Sbjct: 61 ALDAMHKLNGKPIPGTNPIVRF 82
>gi|195117982|ref|XP_002003519.1| GI17961 [Drosophila mojavensis]
gi|193914094|gb|EDW12961.1| GI17961 [Drosophila mojavensis]
Length = 346
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
+S HC L++G+L + TE + A R +G D V+ N G+ G+C V S++
Sbjct: 2 TSVHCQLWMGSLEPYMTENFIIAAFRKMG-EDPTTVRLMRNKYTGEPAGYCFVNFISDDH 60
Query: 127 MSLVMERLPTLELHGRKPMVAY 148
M +L + G P+V +
Sbjct: 61 ALDAMHKLNGKPIPGTNPIVRF 82
>gi|118489861|gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 294
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+V NL W + D+ D G DV+ + NG+S+GF VT+ + E +
Sbjct: 95 KLFVVNLPWSFSVVDIKDLFGQCGTVS--DVEIIKQ-KNGRSRGFAFVTMTTGEEAQAAI 151
Query: 132 ERLPTLELHGRKPMVAYPTR 151
++ +LE+ GR V + R
Sbjct: 152 DKFNSLEVSGRIIRVEFAKR 171
>gi|358059890|dbj|GAA94320.1| hypothetical protein E5Q_00970 [Mixia osmundae IAM 14324]
Length = 173
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 59 SHHHSQATSSSHCN--LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGF 116
S ++QA+SSS + L+VG L W TT+ + A G + D ++ G+S+GF
Sbjct: 7 SGSYTQASSSSGMSQKLFVGGLAWATTDDSLFSAFSQYG--EVTDCIVMKDRETGRSRGF 64
Query: 117 CTVTLGSEESMSLVMERLPTLELHGRKPMV 146
VT+ + +E L +L GR+ V
Sbjct: 65 GFVTMSDPAAAEQAIEALNNGDLDGRQVRV 94
>gi|558629|emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus vulgaris]
Length = 287
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VGNL+W T ++ A + G + + + G+S+G+ V ++E M +
Sbjct: 205 KLFVGNLSWSVTNEILTQAFQEYGT--VVGARVLYDGETGRSRGYGFVCFSTKEEMEAAL 262
Query: 132 ERLPTLELHGRKPMVA 147
L +EL GR V+
Sbjct: 263 GALNDVELEGRAMRVS 278
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LY GNL + A ++ I+ G + I+V + + G+S+GF VT+ E + V+
Sbjct: 114 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLY--DRDTGKSRGFAFVTMSCIEDCNAVI 171
Query: 132 ERLPTLELHGRKPMVAYPTR 151
E L E GR V + +
Sbjct: 172 ENLDGKEYLGRTLRVNFSNK 191
>gi|254585211|ref|XP_002498173.1| ZYRO0G04004p [Zygosaccharomyces rouxii]
gi|238941067|emb|CAR29240.1| ZYRO0G04004p [Zygosaccharomyces rouxii]
Length = 167
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
+ +++G L TEAD+ GVP +D+K + NG+S+GF + + S
Sbjct: 32 NQAYIFIGGLHKELTEADVLTVFSQYGVP--VDLKLVRDRENGESRGFAYLKYEDQRSTV 89
Query: 129 LVMERLPTLELHGRKPMV 146
L ++ L + GR+ V
Sbjct: 90 LAVDNLNGAIVAGRRIRV 107
>gi|268569440|ref|XP_002640523.1| Hypothetical protein CBG18685 [Caenorhabditis briggsae]
Length = 84
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S S ++YVGN + TTE +M D + G + +V+ + G+ +GF V E
Sbjct: 2 SGSGFSVYVGNAPYQTTEQEMGDFFATAG--EVTNVRIVLDRETGRPRGFAFVEFAEEAG 59
Query: 127 MSLVMERLPTLELHGRKPMVAYPTR 151
+ +E+ + +GR V TR
Sbjct: 60 ANRAVEQFNGTDFNGRSLRVNLATR 84
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGN+ + TE D+ G +F+ ++ E NG+S+G+ V +E
Sbjct: 279 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDE---NGRSRGYGFVQFRDAGQAREALE 335
Query: 133 RLPTLELHGRKPMVAY--------PTRNVLYQFEAQN 161
++ +L GR V T N+L +F QN
Sbjct: 336 KMNGFDLAGRPIRVGLGNDKFTPESTANMLQRFSGQN 372
>gi|30681492|ref|NP_850017.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|330252116|gb|AEC07210.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 159
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A+ +VG L W T + + A G D ID K + G+S+GF VT E
Sbjct: 2 ASGDVEYRCFVGGLAWATDDRALETAFAQYG--DVIDSKIINDRETGRSRGFGFVTFKDE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
++M +E + +L GR V
Sbjct: 60 KAMKDAIEGMNGQDLDGRSITV 81
>gi|21553354|gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A+ +VG L W T + + A G D ID K + G+S+GF VT E
Sbjct: 2 ASGDVEYRCFVGGLAWATDDRALETAFAQYG--DVIDSKIINDRETGRSRGFGFVTFKDE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
++M +E + +L GR V
Sbjct: 60 KAMKDAIEGMNGQDLDGRSITV 81
>gi|227204227|dbj|BAH56965.1| AT2G21660 [Arabidopsis thaliana]
Length = 153
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A+ +VG L W T + + A G D ID K + G+S+GF VT E
Sbjct: 2 ASGDVEYRCFVGGLAWATDDRALETAFAQYG--DVIDSKIINDRETGRSRGFGFVTFKDE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
++M +E + +L GR V
Sbjct: 60 KAMKDAIEGMNGQDLDGRSITV 81
>gi|194901408|ref|XP_001980244.1| GG17035 [Drosophila erecta]
gi|190651947|gb|EDV49202.1| GG17035 [Drosophila erecta]
Length = 345
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 22 EHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--LYVGNLT 79
+ V TE + D DVT G + A + S + S A+ + L+VG L+
Sbjct: 5 KQVDTEMNGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSGASGQRDDDRKLFVGGLS 64
Query: 80 WWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
W TTE ++ D G + I+VK + G+S+GF + + E++ V
Sbjct: 65 WETTEKELRDHFGKYGEIESINVK--TDPQTGRSRGFAFIVFTNTEAIDKV 113
>gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum]
Length = 289
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 58 YSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFC 117
Y + S +YVGNL W + + G +D K + +G+S+GF
Sbjct: 191 YQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFSEQG--KVVDAKVVYDRDSGRSRGFG 248
Query: 118 TVTLGSEESMSLVMERLPTLELHGR----KPMVAYPTR 151
VT S + ++ +E L ++L GR P A P R
Sbjct: 249 FVTYSSAKEVNDAIESLDGVDLGGRAIRVSPAEARPPR 286
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 62 HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
+ + ++ ++VGNL + A +++ G + ++V + + G+S+GF VT+
Sbjct: 90 YEERNANPDLKIFVGNLPFSVDSAALAELFERAGDVEMVEVIY--DKLTGRSRGFGFVTM 147
Query: 122 GSEESMSLVMERLPTLELHGR 142
S+E++ ++ E+ GR
Sbjct: 148 SSKEAVEAACQQFNGYEIDGR 168
>gi|15226605|ref|NP_179760.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|544424|sp|Q03250.1|GRP7_ARATH RecName: Full=Glycine-rich RNA-binding protein 7
gi|16226372|gb|AAL16149.1|AF428381_1 At2g22292/F2G1.7_ [Arabidopsis thaliana]
gi|16301|emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gi|166837|gb|AAA32853.1| RNA-binding protein [Arabidopsis thaliana]
gi|4567224|gb|AAD23639.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
gi|15810032|gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis thaliana]
gi|330252115|gb|AEC07209.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 176
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A+ +VG L W T + + A G D ID K + G+S+GF VT E
Sbjct: 2 ASGDVEYRCFVGGLAWATDDRALETAFAQYG--DVIDSKIINDRETGRSRGFGFVTFKDE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
++M +E + +L GR V
Sbjct: 60 KAMKDAIEGMNGQDLDGRSITV 81
>gi|85113379|ref|XP_964511.1| hypothetical protein NCU02152 [Neurospora crassa OR74A]
gi|28926296|gb|EAA35275.1| predicted protein [Neurospora crassa OR74A]
Length = 379
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + +L WWTT+ D+ +R + D+ F E+ NG+SKG V S+++ S
Sbjct: 100 LTISDLHWWTTDDDIRGWVRQANCESELKDITFSEHKVNGKSKGQAYVEFTSQQAASATK 159
Query: 132 ERLPTLELH-GRKPMVAYPTRNVLYQFEAQNPLRS 165
+ L G++P V+Y NP R+
Sbjct: 160 HVIDNLSSEVGQQP--GQKRHAVIYSSPIINPFRT 192
>gi|356552894|ref|XP_003544797.1| PREDICTED: uncharacterized protein LOC100788516 [Glycine max]
Length = 274
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 58 YSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFC 117
Y H+ SQ ++ ++VG L W T +M G D ++ + S G+SKG+
Sbjct: 3 YPHYRSQFGDTTFTKVFVGGLAWETPTEEMRKYFEQFG--DILEAVIITDKSTGKSKGYG 60
Query: 118 TVTLGSEES 126
VT ES
Sbjct: 61 FVTFRDPES 69
>gi|354490714|ref|XP_003507501.1| PREDICTED: transformer-2 protein homolog alpha-like [Cricetulus
griseus]
Length = 283
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 103 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 160
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 161 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 193
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A G + ++ K + G+S+GF VT SE+SM +E
Sbjct: 11 FVGGLAWATDDQSLERAFSQFG--EILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ L GR V
Sbjct: 69 MNGQNLDGRNITV 81
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGN+ + TE+D+ G DF+ ++ E G+S+G+ V +E
Sbjct: 290 LYVGNIHFSITESDLQKVFEPFGELDFVQLQKEE---GGRSRGYGFVQFRDPNQAREALE 346
Query: 133 RLPTLELHGRKPMVAY--------PTRNVLYQFEAQ 160
++ +L GR V T N+L +F+ Q
Sbjct: 347 KMNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQ 382
>gi|255565552|ref|XP_002523766.1| dc50, putative [Ricinus communis]
gi|223536978|gb|EEF38615.1| dc50, putative [Ricinus communis]
Length = 210
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++G L+W T++ + +A G ++ K + +G+S+GF VT +++M +E
Sbjct: 9 CFIGGLSWSTSDRGLKEAFEKFG--HLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIE 66
Query: 133 RLPTLELHGRKPMV 146
+ ++L GR V
Sbjct: 67 EMNGMDLDGRTITV 80
>gi|68067995|ref|XP_675916.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56495364|emb|CAH97030.1| conserved hypothetical protein [Plasmodium berghei]
Length = 227
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
C +YVGNL W T + D ++ +G D + V FE+ + G+SKG V S E
Sbjct: 6 CRVYVGNLPWKVTWPVLKDHMKKVG--DVLRVDIFED-TQGRSKGCGIVEYSSCEEAQEA 62
Query: 131 MERLPTLELHGRKPMV 146
+ RL +L R V
Sbjct: 63 INRLNDSKLEDRLIFV 78
>gi|399216607|emb|CCF73294.1| unnamed protein product [Babesia microti strain RI]
Length = 158
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
C +Y+G L TE D+ G P ID+ ++ G+SKGFC + +++S L
Sbjct: 33 CYIYIGGLHKKLTEGDIIIVFSQFGEP--IDINLVRDSKTGESKGFCFLGYRNQKSTILA 90
Query: 131 MERLPTLEL 139
++ + +L
Sbjct: 91 VDNMNGYKL 99
>gi|195500849|ref|XP_002097550.1| GE24428 [Drosophila yakuba]
gi|194183651|gb|EDW97262.1| GE24428 [Drosophila yakuba]
Length = 345
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 22 EHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--LYVGNLT 79
+ V TE + D DVT G + A + S + S A+ + L+VG L+
Sbjct: 5 KQVDTEMNGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSGASGQRDDDRKLFVGGLS 64
Query: 80 WWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
W TTE ++ D G + I+VK + G+S+GF + + E++ V
Sbjct: 65 WETTEKELRDHFGKYGEIESINVK--TDPQTGRSRGFAFIVFTNTEAIDKV 113
>gi|187735468|ref|YP_001877580.1| RNP-1 like RNA-binding protein [Akkermansia muciniphila ATCC
BAA-835]
gi|187425520|gb|ACD04799.1| RNP-1 like RNA-binding protein [Akkermansia muciniphila ATCC
BAA-835]
Length = 221
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 51 ARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASN 110
AR R R S + S+ LYVGNL++ TE+D+ D + IG + +++ + N
Sbjct: 82 ARNRQDRVS---APKQPVSNRRLYVGNLSYEATESDLEDVFKGIGEVNSVEIIY--NPRT 136
Query: 111 GQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVA 147
+SKG+ V + E ++ L GR +V+
Sbjct: 137 HKSKGYAFVEMKKMEDAIRSVDILHNQPFMGRNLLVS 173
>gi|66576254|gb|AAY51685.1| RNA-binding protein [Chlorobium tepidum TLS]
Length = 90
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDV---KFFENASNGQSKGFCTVTLGSEESMS 128
N+Y+GNL + TEAD+S A G +V KF G+SKGF V + + +
Sbjct: 2 NIYIGNLDYNVTEADLSGAFGEFGTVSKANVIIDKF-----TGRSKGFGFVEMPDDAEAN 56
Query: 129 LVMERLPTLELHGRKPMV 146
+ +L L+GRK V
Sbjct: 57 EAISQLNESSLNGRKIRV 74
>gi|317485939|ref|ZP_07944796.1| RNA recognition domain-containing protein [Bilophila wadsworthia
3_1_6]
gi|316922807|gb|EFV44036.1| RNA recognition domain-containing protein [Bilophila wadsworthia
3_1_6]
Length = 90
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+LYVGNL W TE D+ D G + VK + G+++GF V + S E + +
Sbjct: 4 SLYVGNLPWSATEDDVRDLFAPYG--EVTSVKLVSDRETGRARGFGFVEMAS-EGVQAAV 60
Query: 132 ERLPTLELHGRKPMV 146
E L GR V
Sbjct: 61 EALDNFSFSGRNLKV 75
>gi|157889123|dbj|BAF81027.1| transformer-2 [Glandirana rugosa]
Length = 272
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H+ S+A S+ + V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 104 NRRRHNGSRANPDSNMCVGVFGLSLYTTERDLREVFSRYGPLGGVNVVY--DQRTGRSRG 161
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V E ME +EL GR+ V Y
Sbjct: 162 FAFVYFERIEDSRAAMEHANGMELDGRRIRVDY 194
>gi|397632370|gb|EJK70525.1| hypothetical protein THAOC_08111, partial [Thalassiosira oceanica]
Length = 548
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 45 HTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKF 104
HTG SP R R + NL++ +L T+AD++ A G + I K
Sbjct: 356 HTGPSPPRPRE-----------GPAGANLFIYHLPIDLTDADLATAFNPFG--NVISAKV 402
Query: 105 FENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRK 143
+ + G+SKGF V+ S S L +E++ ++ ++
Sbjct: 403 YVDRYTGESKGFGFVSYDSVMSAELAIEQMNGFQIGNKR 441
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A++ +VG L W T + + DA G + ++ K + G+S+GF VT E
Sbjct: 2 ASAEIEFRCFVGGLAWATDDRSLHDAFSPFG--EVLESKIVSDRETGRSRGFGFVTFSDE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
++M +E + EL GR V
Sbjct: 60 QAMMDAIEAMNGKELDGRNITV 81
>gi|302809382|ref|XP_002986384.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
gi|300145920|gb|EFJ12593.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
Length = 145
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+VG L+W TT+ ++ DA G I+ K + +S+GF VT G E SM ++
Sbjct: 4 CFVGGLSWATTDRNLEDAFSPYGT--VIEAKVVLDRDTERSRGFGFVTFGDENSMQDAID 61
Query: 133 RLPTLELHGRKPMVA 147
+ +L GR V+
Sbjct: 62 GMHGKDLDGRSITVS 76
>gi|256828609|ref|YP_003157337.1| RNP-1 like RNA-binding protein [Desulfomicrobium baculatum DSM
4028]
gi|256577785|gb|ACU88921.1| RNP-1 like RNA-binding protein [Desulfomicrobium baculatum DSM
4028]
Length = 85
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+YVGNL+W TT+AD+ G + E+ + G+S+GF V + +E +
Sbjct: 2 NIYVGNLSWSTTDADLKSLFSQYG--EVTSAHVIEDRATGRSRGFGFVEM-DDEGARKAI 58
Query: 132 ERLPTLELHGRKPMV 146
+ + +L GR V
Sbjct: 59 QAVNGTDLQGRTLKV 73
>gi|367010890|ref|XP_003679946.1| hypothetical protein TDEL_0B06060 [Torulaspora delbrueckii]
gi|359747604|emb|CCE90735.1| hypothetical protein TDEL_0B06060 [Torulaspora delbrueckii]
Length = 345
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 41/108 (37%), Gaps = 14/108 (12%)
Query: 41 PFPEHTGRSPARYRHHR------YSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSI 94
P PE P R R Y H A ++V NL + + D + +
Sbjct: 122 PPPESARERPPREARERVKARDQYPQHQYPAYE-----VFVANLPYSINWQALKDMFKEV 176
Query: 95 GVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGR 142
G DV+ NG S+GF T G+ E M +ER EL GR
Sbjct: 177 GNVIRADVEL---DRNGYSRGFGTAIFGTSEEMQAAIERYNGYELEGR 221
>gi|350396366|ref|XP_003484530.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Bombus
impatiens]
Length = 362
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 26 TEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--------LYVGN 77
+ ++ D +D+ Q F E G + + SQ S+ N L+VG
Sbjct: 2 ADQENKDFSEDIADQNF-EQNGEAENGGGDAAENGQESQEDRSTGGNQDSLNDRKLFVGG 60
Query: 78 LTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+W TT+ ++ D + G + I+VK + + G+S+GF + ES+ +M
Sbjct: 61 LSWETTDKELRDHFGTYGDIESINVK--TDPNTGRSRGFAFIVFAKAESLDKIM 112
>gi|373958223|ref|ZP_09618183.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
gi|373894823|gb|EHQ30720.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
Length = 104
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+++GNL + E+++ + G + +K + GQSKGF + ES
Sbjct: 1 MNIFIGNLPYKIQESELRELFEDYG--ELTSLKIITDKQTGQSKGFGFAEMPDRESALKA 58
Query: 131 MERLPTLELHGRKPMV 146
+E L E++GR +V
Sbjct: 59 LEDLNAAEIYGRNIVV 74
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A G + ++ K + G+S+GF VT SE+SM +E
Sbjct: 11 FVGGLAWATDDQSLERAFSQFG--EILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ L GR V
Sbjct: 69 MNGQNLDGRNITV 81
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 46 TGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFF 105
T SPA Y+ R S L+VG L++ T E + D + G I+ K
Sbjct: 15 TSSSPALYQSIR---------CMSSSKLFVGGLSYGTDEQSLRDTFANYG--QVIEAKII 63
Query: 106 ENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMV 146
+ G+S+GF +T S E S + L +L GR V
Sbjct: 64 NDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRV 104
>gi|45382747|ref|NP_990009.1| transformer-2 protein homolog beta [Gallus gallus]
gi|224059830|ref|XP_002195659.1| PREDICTED: transformer-2 protein homolog beta isoform 1
[Taeniopygia guttata]
gi|11494371|gb|AAG35783.1|AF282244_1 transformer-2 beta [Gallus gallus]
Length = 289
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 57 RYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGF 116
R H ++A +C L V L+ +TTE D+ + G DV + + +S+GF
Sbjct: 104 RRRHIGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGP--IADVSIVYDQQSRRSRGF 161
Query: 117 CTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
V + E ER +EL GR+ V +
Sbjct: 162 AFVYFENVEDAKEAKERANGMELDGRRIRVDF 193
>gi|298713553|emb|CBJ27081.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 437
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
++V N++W T + D + G F+++ E+A G+SKG+ TV GSE+ + +
Sbjct: 359 QVHVSNVSWETGWQSLKDHFKQCGRVQFVEIP--EDA-QGRSKGYATVRFGSEQDAADAI 415
Query: 132 ERLPTLELHGRKPMVAYPTR 151
+L +L GR+ V R
Sbjct: 416 NQLDGTDLDGRRIGVREDNR 435
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 45 HTGRSPARYRHHRYSHHHSQATSSSHCN--LYVGNLTWWTTEADMSDAIRSIGVPDFIDV 102
+TGR+ + + Y + + N +YVGNL W T ++ D + + G P +V
Sbjct: 37 NTGRASRQQQTQPYRQPAPKGSVGGGSNNRVYVGNLAWTVTWKELKDLMGTCG-PCKAEV 95
Query: 103 KFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGR 142
++G+S+G+ VT S S ++RL +L GR
Sbjct: 96 PC---GADGRSRGYGLVTFTSAAGASDAIDRLQDTDLMGR 132
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Query: 44 EHTGRSPARYRHHR--YSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFID 101
E GR P + R R +H ++ +YVGNL+W D+ D +R+ G F+D
Sbjct: 234 ELMGR-PIQVREERGDAGNHGRGVGGAAGAKVYVGNLSWECQWQDLKDHMRAAGSVKFVD 292
Query: 102 VKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGR 142
+ F E G+SKG V + + + L EL GR
Sbjct: 293 L-FQE--PGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGR 330
>gi|148907319|gb|ABR16796.1| unknown [Picea sitchensis]
Length = 387
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
LYVGNL A ++ + G + ++V N G S+GF VT+ + + +
Sbjct: 95 KLYVGNLPRSCDIAQLTQLFQEFGTVESVEV--VRNEETGISRGFAFVTMSTVKEAKSAI 152
Query: 132 ERLPTLELHGRKPMVAYPTR 151
E+L +L GR +V +P +
Sbjct: 153 EKLQGSDLGGRDMIVNFPAK 172
>gi|402084055|gb|EJT79073.1| nucleic acid-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 304
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 39 LQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPD 98
L+P ++ + AR R T S LY+GN+ + TT+ +++ RS+ +
Sbjct: 178 LKPTKDNRSQGEAREARERLPLAERVPTKS----LYIGNIPYETTDVELNKLFRSL--DN 231
Query: 99 FIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
DV+ + S G +GF SEE+ ++L + L GR+ + +
Sbjct: 232 VTDVRIAVDRSTGWPRGFAHADFSSEEAALAAGQKLEDMTLLGRQLRIDF 281
>gi|227206222|dbj|BAH57166.1| AT2G21660 [Arabidopsis thaliana]
Length = 99
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T + + A G D ID K + G+S+GF VT E++M +E
Sbjct: 11 FVGGLAWATDDRALETAFAQYG--DVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 134 LPTLELHGR 142
+ +L GR
Sbjct: 69 MNGQDLDGR 77
>gi|366992097|ref|XP_003675814.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
gi|342301679|emb|CCC69450.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S +C +++G L W TTE + + G + +++K ++ + G+S+GF +T + S
Sbjct: 192 SKDNCKMFIGGLNWETTEDGLKNYFSKYG--NVVELKIMKDGATGRSRGFGFLTFENPSS 249
Query: 127 MSLVME 132
+ V++
Sbjct: 250 VDEVVK 255
>gi|196476793|gb|ACG76260.1| heterogeneous nuclear ribonucleoprotein [Amblyomma americanum]
Length = 195
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
T+ L+VG ++W T D+ + GV +DV + + G+S+GF VT +++
Sbjct: 27 TNEDERKLFVGGISWDTDNKDLREYFSKFGV--VVDVNIKTDPTTGKSRGFGFVTFNAKD 84
Query: 126 SMSLVMERLP 135
++ V++ P
Sbjct: 85 AIEAVLKATP 94
>gi|195576533|ref|XP_002078130.1| GD22708 [Drosophila simulans]
gi|194190139|gb|EDX03715.1| GD22708 [Drosophila simulans]
Length = 336
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
+S HC L++G+L + TE + A R +G D V+ N G+ G+C V S++
Sbjct: 2 ASVHCQLWMGSLESYMTENFIIAAFRKMG-EDPTTVRLMRNKYTGEPAGYCFVNFISDDH 60
Query: 127 MSLVMERLPTLELHGRKPMVAY 148
M +L + G P+V +
Sbjct: 61 ALDAMHKLNGKPIPGTNPIVRF 82
>gi|238010804|gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 45 HTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKF 104
++G P R R R Q +YVGNL+W + +++ G + ++ +
Sbjct: 155 NSGPPPPRDRSSR----SPQRPRGDANRVYVGNLSWGVDNSALANLFSEQG--EVLEARI 208
Query: 105 FENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMV 146
+ +G+S+GF VT GS E + + L +L GR+ V
Sbjct: 209 IYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRV 250
>gi|28574707|ref|NP_608837.2| CG15440 [Drosophila melanogaster]
gi|19528537|gb|AAL90383.1| RE72132p [Drosophila melanogaster]
gi|28380262|gb|AAF51009.2| CG15440 [Drosophila melanogaster]
gi|220948848|gb|ACL86967.1| CG15440-PA [synthetic construct]
gi|220958268|gb|ACL91677.1| CG15440-PA [synthetic construct]
Length = 336
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
+S HC L++G+L + TE + A R +G D V+ N G+ G+C V S++
Sbjct: 2 ASVHCQLWMGSLESYMTENFIIAAFRKMG-EDPTTVRLMRNKYTGEPAGYCFVNFISDDH 60
Query: 127 MSLVMERLPTLELHGRKPMVAY 148
M +L + G P+V +
Sbjct: 61 ALDAMHKLNGKPIPGTNPIVRF 82
>gi|167393339|ref|XP_001740534.1| ribonucleoprotein, chloroplast [Entamoeba dispar SAW760]
gi|165895330|gb|EDR23049.1| ribonucleoprotein, chloroplast, putative [Entamoeba dispar SAW760]
Length = 198
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
+ + NLY+GN+ + +TE D+ + I+ D + + + G++KGF V + E
Sbjct: 10 NEYTNLYIGNIPYSSTEKDVKNFIQC----DECKITIVIDKNTGKTKGFGFVAFETHEQA 65
Query: 128 SLVMERLPTLELHGRKPMV 146
+ +L EL GR P++
Sbjct: 66 LEIKNKLQGKELEGR-PII 83
>gi|74272657|gb|ABA01124.1| G strand binding-protein 1/telomere binding-protein [Chlamydomonas
incerta]
Length = 225
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%)
Query: 62 HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTL 121
Q+T +VGNL W T+ D+ D R G + +V ++ +SKG+ V
Sbjct: 2 EDQSTIRLGKRCFVGNLAWKTSWQDLKDKFRECGNVVYTNVMRDDDGPGSRSKGWGIVEF 61
Query: 122 GSEESMSLVMERLPTLELHGRKPMV 146
S E ++ L EL GR+ +V
Sbjct: 62 ESPEEALHAIQTLNGAELGGRRILV 86
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T ++ + A S G + + + G+S+GF V+ E+S + ++
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTSFG--EVTEATVIADRETGRSRGFGFVSFSCEDSANNAIK 94
Query: 133 RLPTLELHGRKPMVAYPT 150
+ EL+GR+ V T
Sbjct: 95 EMDGKELNGRQIRVNLAT 112
>gi|15228191|ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana]
gi|2062166|gb|AAB63640.1| poly(A)-binding protein isolog [Arabidopsis thaliana]
gi|9279720|dbj|BAB01277.1| poly(A) binding protein-like [Arabidopsis thaliana]
gi|332642284|gb|AEE75805.1| poly(A) binding protein 6 [Arabidopsis thaliana]
Length = 537
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 59 SHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCT 118
+H HS S LYVG+L+ TE D+ D S+ VP + V N+ G+S +
Sbjct: 13 NHQHSSRFGS----LYVGDLSPDVTEKDLIDKF-SLNVP-VVSVHLCRNSVTGKSMCYAY 66
Query: 119 VTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQ 156
+ S S S M RL +L G+ + + R++ Y+
Sbjct: 67 INFDSPFSASNAMTRLNHSDLKGKAMRIMWSQRDLAYR 104
>gi|376297960|ref|YP_005169190.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
gi|323460522|gb|EGB16387.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
Length = 87
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+YVGNL W TE D+ A + G + I VK + G+ +GF V + + +++ +
Sbjct: 4 NIYVGNLPWSATEEDVRAAFETFG--EVISVKLVNDRETGRPRGFGFVEMDDQGALAAI- 60
Query: 132 ERLPTLELHGRKPMV 146
E L + GR V
Sbjct: 61 ESLDGSDFGGRNLKV 75
>gi|340729952|ref|XP_003403257.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
terrestris]
Length = 362
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 26 TEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--------LYVGN 77
+ ++ D +D+ Q F E G + + SQ S+ N L+VG
Sbjct: 2 ADQENKDFSEDIADQNF-EQNGEAENGGGDATENGQESQEDRSTGGNQDSLNDRKLFVGG 60
Query: 78 LTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+W TT+ ++ D + G + I+VK + + G+S+GF + ES+ +M
Sbjct: 61 LSWETTDKELRDHFGTYGDIESINVK--TDPNTGRSRGFAFIVFAKAESLDKIM 112
>gi|422295750|gb|EKU23049.1| hypothetical protein NGA_0682100 [Nannochloropsis gaditana CCMP526]
Length = 227
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
++VGNL+W TT ++ + + G + V+ ++ G+SKG+ VT + E S M
Sbjct: 4 TVFVGNLSWGTTADSLTAIMETAG--RVLGVEVQAHSDTGRSKGWALVTFETAEDASRAM 61
Query: 132 ERLPTLELHGR 142
E L E+ GR
Sbjct: 62 ELLCGREVEGR 72
>gi|392397594|ref|YP_006434195.1| RRM domain-containing RNA-binding protein [Flexibacter litoralis
DSM 6794]
gi|390528672|gb|AFM04402.1| RRM domain-containing RNA-binding protein [Flexibacter litoralis
DSM 6794]
Length = 97
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
NLYV NL + +E ++ +GV K + +S+GF V + SEE
Sbjct: 1 MNLYVSNLPYSISEEELEAVFSELGV--VTSTKIITDRETRRSRGFGFVEMESEEDGEAA 58
Query: 131 MERLPTLELHGRKPMV 146
+E L +EL GR+ V
Sbjct: 59 IEELNGVELKGREIQV 74
>gi|195342467|ref|XP_002037822.1| GM18090 [Drosophila sechellia]
gi|194132672|gb|EDW54240.1| GM18090 [Drosophila sechellia]
Length = 336
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
+S HC L++G+L + TE + A R +G D V+ N G+ G+C V S++
Sbjct: 2 ASVHCQLWMGSLESYMTENFIIAAFRKMG-EDPTTVRLMRNKYTGEPAGYCFVNFISDDH 60
Query: 127 MSLVMERLPTLELHGRKPMVAY 148
M +L + G P+V +
Sbjct: 61 ALDAMHKLNGKPIPGTNPIVRF 82
>gi|84996059|ref|XP_952751.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65303748|emb|CAI76125.1| hypothetical protein, conserved [Theileria annulata]
Length = 320
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 63 SQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLG 122
++ S+ C +YVGNL+W D+ D ++ +G + I E+ G+SKG V
Sbjct: 2 NRVCQSNKCRVYVGNLSWKVRWQDLKDHMKQVG--EVIRADIIEDYE-GKSKGCGIVEFA 58
Query: 123 SEESMSLVMERL 134
EES S + L
Sbjct: 59 DEESASRAIAEL 70
>gi|1350820|sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor
gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 41 PFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFI 100
P PE S R + S +YVGNL W + + G +
Sbjct: 164 PPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQG--KVV 221
Query: 101 DVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGR----KPMVAYPTR 151
D K + +G+S+GF VT S E ++ +E L ++L+GR P A P R
Sbjct: 222 DAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPR 276
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
S ++VGNL + A +++ G + ++V + + G+S+GF VT+ S+E +
Sbjct: 84 SPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIY--DKLTGRSRGFGFVTMSSKEEV 141
Query: 128 SLVMERLPTLELHGR 142
++ EL GR
Sbjct: 142 EAACQQFNGYELDGR 156
>gi|380471022|emb|CCF47477.1| RNA binding protein, partial [Colletotrichum higginsianum]
Length = 151
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGN+++ ++AD+++ ++ D DV+ + + G +GF S E+ E
Sbjct: 21 LYVGNISFEASDADLNNLFATL--KDVKDVRVAVDRATGWPRGFAHADFASVEAAQAGKE 78
Query: 133 RLPTLELHGRKPMVAY-PTRNVLYQFEAQN 161
L ++L GR+ ++Y P ++ + + N
Sbjct: 79 ALAGVQLGGRELKISYAPVKDQQFMSDGGN 108
>gi|195471272|ref|XP_002087929.1| GE14719 [Drosophila yakuba]
gi|194174030|gb|EDW87641.1| GE14719 [Drosophila yakuba]
Length = 338
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
+S HC L++G+L + TE + A R +G D V+ N G+ G+C V S++
Sbjct: 2 ASVHCQLWMGSLESYMTENFIIAAFRKMG-EDPTTVRLMRNKYTGEPAGYCFVNFISDDH 60
Query: 127 MSLVMERLPTLELHGRKPMVAY 148
M +L + G P+V +
Sbjct: 61 ALDAMHKLNGKPIPGTNPIVRF 82
>gi|182412766|ref|YP_001817832.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
gi|177839980|gb|ACB74232.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
Length = 117
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S+ LYVGNL++ TTE ++ A G DV + G+ +GF VT+G+ E
Sbjct: 2 SNSKLYVGNLSFKTTEEELRSAFGQFG--SVTDVYVAMDKMTGRPRGFAFVTMGTAEEAK 59
Query: 129 LVMERLPTLELHGRKPMV 146
E+L +L GR+ V
Sbjct: 60 AAAEKLNGTDLGGRQLTV 77
>gi|24646605|ref|NP_652209.1| squid, isoform C [Drosophila melanogaster]
gi|386765705|ref|NP_001247088.1| squid, isoform E [Drosophila melanogaster]
gi|23171183|gb|AAN13570.1| squid, isoform C [Drosophila melanogaster]
gi|73853364|gb|AAZ86753.1| LD29474p [Drosophila melanogaster]
gi|220951946|gb|ACL88516.1| sqd-PC [synthetic construct]
gi|383292688|gb|AFH06406.1| squid, isoform E [Drosophila melanogaster]
Length = 308
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 22 EHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--LYVGNLT 79
+ V TE + D DVT G + A + S + S A+ + L+VG L+
Sbjct: 5 KQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGGLS 64
Query: 80 WWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
W TTE ++ D G + I+VK + G+S+GF + + E++ V
Sbjct: 65 WETTEKELRDHFGKYGEIESINVK--TDPQTGRSRGFAFIVFTNTEAIDKV 113
>gi|392570008|gb|EIW63181.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 126
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL+W TT+ + A + G +D + G+S+GF VT S +
Sbjct: 5 VYVGNLSWNTTDDSLRSAFSNYG--QILDSIVMRDRDTGRSRGFGFVTFSSSGEAQTAIS 62
Query: 133 RLPTLELHGRKPMV 146
L EL GR+ V
Sbjct: 63 SLNEQELDGRRIKV 76
>gi|297804934|ref|XP_002870351.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
gi|297316187|gb|EFH46610.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T + + DA G + +D K + G+S+GF V E + S +
Sbjct: 37 LFVGGLSWGTDDQSLRDAFAHFG--EVVDAKVIVDRETGRSRGFGFVNFNDEGAASAAIS 94
Query: 133 RLPTLELHGRKPMV 146
+ +L+GR V
Sbjct: 95 EMDGKDLNGRNIRV 108
>gi|359807285|ref|NP_001240860.1| uncharacterized protein LOC100815224 [Glycine max]
gi|255645181|gb|ACU23088.1| unknown [Glycine max]
Length = 208
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++G L W T++ + D G I+ K + +G+S+GF VT +++M ++
Sbjct: 9 CFIGGLAWSTSDRKLKDTFEKFGK--LIEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAID 66
Query: 133 RLPTLELHGRKPMV 146
+ ++L GR V
Sbjct: 67 AMNGIDLDGRTITV 80
>gi|256421371|ref|YP_003122024.1| RNP-1 like RNA-binding protein [Chitinophaga pinensis DSM 2588]
gi|256036279|gb|ACU59823.1| RNP-1 like RNA-binding protein [Chitinophaga pinensis DSM 2588]
Length = 108
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+YV NL + +AD+ G + K ++ G+S+GF V + ++E S
Sbjct: 1 MNIYVANLHYRLNDADLHQIFSEFG--EVTSAKIIKDHETGRSRGFGFVEMPNQEEGSKA 58
Query: 131 MERLPTLELHGRKPMV 146
M+ L E+ G++ MV
Sbjct: 59 MDSLNGTEIEGKQLMV 74
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T + + +A S G D + + + +G+S+GF V+ + + M+
Sbjct: 39 LFVGGLSWNTNDDSLKEAFTSFG--DVTEARVINDRESGRSRGFGFVSFANGDDAKSAMD 96
Query: 133 RLPTLELHGRKPMVAYP 149
+ EL GR V +
Sbjct: 97 AMDGKELEGRSIRVNFA 113
>gi|385455|gb|AAB26989.1| SqdB [Drosophila melanogaster]
Length = 308
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 22 EHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--LYVGNLT 79
+ V TE + D DVT G + A + S + S A+ + L+VG L+
Sbjct: 5 KQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGGLS 64
Query: 80 WWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
W TTE ++ D G + I+VK + G+S+GF + + E++ V
Sbjct: 65 WETTEKELRDHFGKYGEIESINVK--TDPQTGRSRGFAFIVFTNTEAIDKV 113
>gi|156086376|ref|XP_001610597.1| single stranded G-strand telomeric DNA-binding protein [Babesia
bovis T2Bo]
gi|154797850|gb|EDO07029.1| single stranded G-strand telomeric DNA-binding protein, putative
[Babesia bovis]
Length = 196
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
+ S C +YVGNL+W D+ D ++ +G + I E+ +G+SKG V E
Sbjct: 2 SQDSKCRVYVGNLSWRVKWQDLKDHMKQVG--EVIRADIIEDF-DGKSKGCGIVEFVDEI 58
Query: 126 SMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRSY 171
+ M+ L L R P+ R Y F +N R R +
Sbjct: 59 TAQRAMDELNDTMLFDR-PIFVREDRENAYNF--RNTRRQNMNRDW 101
>gi|187282153|ref|NP_001119768.1| transformer-2 protein homolog alpha [Rattus norvegicus]
gi|149033412|gb|EDL88213.1| similar to RIKEN cDNA G430041M01 (predicted) [Rattus norvegicus]
Length = 235
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 102 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 159
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 160 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 192
>gi|11040|emb|CAA44504.1| hrp40.2 [Drosophila melanogaster]
Length = 345
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 22 EHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--LYVGNLT 79
+ V TE + D DVT G + A + S + S A+ + L+VG L+
Sbjct: 5 KQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGGLS 64
Query: 80 WWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
W TTE ++ D G + I+VK + G+S+GF + + E++ V
Sbjct: 65 WETTEKELRDHFGKYGEIESINVK--TDPQTGRSRGFAFIVFTNTEAIDKV 113
>gi|24646607|ref|NP_731825.1| squid, isoform B [Drosophila melanogaster]
gi|55584092|sp|Q08473.3|SQD_DROME RecName: Full=RNA-binding protein squid; AltName:
Full=Heterogeneous nuclear ribonucleoprotein 40;
Short=HNRNP 40
gi|23171184|gb|AAF54963.2| squid, isoform B [Drosophila melanogaster]
Length = 344
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 22 EHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--LYVGNLT 79
+ V TE + D DVT G + A + S + S A+ + L+VG L+
Sbjct: 5 KQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGGLS 64
Query: 80 WWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
W TTE ++ D G + I+VK + G+S+GF + + E++ V
Sbjct: 65 WETTEKELRDHFGKYGEIESINVK--TDPQTGRSRGFAFIVFTNTEAIDKV 113
>gi|70983602|ref|XP_747328.1| nucleic acid-binding protein [Aspergillus fumigatus Af293]
gi|66844954|gb|EAL85290.1| nucleic acid-binding protein [Aspergillus fumigatus Af293]
gi|159123666|gb|EDP48785.1| nucleic acid-binding protein [Aspergillus fumigatus A1163]
Length = 324
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LY+GNL++ T+ D+++ R I + IDV+ + GQ +GF ES E
Sbjct: 234 LYLGNLSFEMTDRDLNELFRDIN--NVIDVRVSVDRRTGQPRGFAHAEFLDVESAQKAFE 291
Query: 133 RLPTLELHGRKPMVAYPTRN 152
L +GR+ V Y + N
Sbjct: 292 ILSGKAPYGRRIRVDYSSTN 311
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL + T D+ + ++ GV + +D+ + G S+GF V S E+ +E
Sbjct: 146 VYVGNLFYDVTAEDLKNHMQQFGVVERVDLI---TDNRGLSRGFAYVHFDSIEAAKSCVE 202
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSRRSY 171
+ GR+ Y + PLR SR Y
Sbjct: 203 AMHLQIFEGRRITAQYASSG------GTRPLRPASRTLY 235
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W T ++ + A S G + + + G+S+GF V+ E+S + ++
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTSFG--EVTEATVIADRETGRSRGFGFVSFSCEDSANNAIK 94
Query: 133 RLPTLELHGRKPMVAYPT 150
+ EL+GR+ V T
Sbjct: 95 EMDGKELNGRQIRVNLAT 112
>gi|388852481|emb|CCF53883.1| related to RNA-binding region containing protein 2 [Ustilago
hordei]
Length = 678
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
++ LYVG+L + T+ ++ G +++D+ G+SKGFC + E
Sbjct: 424 NTEARLYVGSLHFSLTDENVKAVFEPFGEIEYVDL--HREPGTGKSKGFCFIQFKHAEDA 481
Query: 128 SLVMERLPTLELHGRKPMVA 147
+E++ EL GR V
Sbjct: 482 KKALEQMNGFELAGRAIRVG 501
>gi|383765116|ref|YP_005444097.1| RNA-binding protein [Phycisphaera mikurensis NBRC 102666]
gi|381385384|dbj|BAM02200.1| RNA-binding protein [Phycisphaera mikurensis NBRC 102666]
Length = 166
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+Y+GNL + T EAD++D G + + ++ G+S+GF V + + +L
Sbjct: 2 INIYIGNLPYKTGEADLADLFSRFGTVERATI--VKDRDTGRSRGFGFVEMEDHAAGTLA 59
Query: 131 MERLPTLELHGR 142
+E L E +GR
Sbjct: 60 IETLLAEEYNGR 71
>gi|307211208|gb|EFN87408.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 331
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 32 DLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAI 91
D +DV Q F ++ + + S L+VG L+W TT+ ++ D
Sbjct: 9 DFSEDVAEQNFDKNGDAESGDVGDGGDAVENGSQDSQEDRKLFVGGLSWETTDKELRDHF 68
Query: 92 RSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+ G + I+VK + + G+S+GF + E++ +M
Sbjct: 69 NTYGDIESINVK--TDPNTGRSRGFAFIVFAKAEALDKIM 106
>gi|296820488|ref|XP_002849949.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
gi|238837503|gb|EEQ27165.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
Length = 595
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 59 SHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCT 118
SH +S + LYVGN+ + TE+D+ + G DF+ ++ E G+SKG+
Sbjct: 290 SHANSNHQAIPFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREE---AGRSKGYGF 346
Query: 119 VTLGSEESMSLVMERLPTLELHGR 142
V +E++ +L GR
Sbjct: 347 VQFRDPNQAREALEKMNGFDLAGR 370
>gi|449544433|gb|EMD35406.1| hypothetical protein CERSUDRAFT_124727 [Ceriporiopsis subvermispora
B]
Length = 982
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
NL+VGNL + D+ D R G DV ++G+S+GF TV+ +E +
Sbjct: 266 NLFVGNLPFHIQWQDLKDLFRQAGAVQRADVAL---GADGRSRGFGTVSFANEADAERAV 322
Query: 132 ERLPTLELHGRKPMVAY 148
E +GR V Y
Sbjct: 323 RMFNGFEYNGRALKVHY 339
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+ G+L+W + + +A +S G + + + + + G+S+GF V G ES + E
Sbjct: 205 LFAGSLSWGVDDNALYEAFKSFG--NIVSARVVTDKNTGRSRGFGYVDFGDSESATKAYE 262
Query: 133 RLPTLELHGR 142
+ E+ GR
Sbjct: 263 AMQGQEIDGR 272
>gi|345329358|ref|XP_001513669.2| PREDICTED: transformer-2 protein homolog alpha-like
[Ornithorhynchus anatinus]
Length = 284
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 106 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 163
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 164 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 196
>gi|167385431|ref|XP_001733374.1| ribonucleoprotein, chloroplast [Entamoeba dispar SAW760]
gi|165899888|gb|EDR26376.1| ribonucleoprotein, chloroplast, putative [Entamoeba dispar SAW760]
Length = 249
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
+ + NLY+GN+ + +TE D+ + I+ D + + + G++KGF V + E
Sbjct: 31 NEYTNLYIGNIPYSSTEKDVKNFIQC----DECKITIVIDKNTGKTKGFGFVAFETHEQA 86
Query: 128 SLVMERLPTLELHGRKPMV 146
+ +L EL GR P++
Sbjct: 87 LEIKNKLQGKELEGR-PII 104
>gi|429328603|gb|AFZ80363.1| hypothetical protein BEWA_032160 [Babesia equi]
Length = 291
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 50/129 (38%), Gaps = 20/129 (15%)
Query: 18 TSPGEHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCNLYVGN 77
T PG ++S I ++ LQ TG H+RY C +Y+G
Sbjct: 4 TGPGANISA----IQRLSELELQ-----TGAIGESSWHNRYK---------DSCYIYIGG 45
Query: 78 LTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTL 137
L TE D+ G P ID+ N G+S G+C + + S L ++
Sbjct: 46 LDKRMTEGDIIIVFSQFGEP--IDINLKRNGKTGESLGYCFLGYKDQRSTILAVDNFNGS 103
Query: 138 ELHGRKPMV 146
L GR+ V
Sbjct: 104 TLLGRRIRV 112
>gi|326485177|gb|EGE09187.1| RNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 560
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 59 SHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCT 118
+H ++ S LYVGN+ + TE+D+ + G DF+ ++ E G+SKG+
Sbjct: 255 AHSNNNQQSIPFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREE---AGRSKGYGF 311
Query: 119 VTLGSEESMSLVMERLPTLELHGR 142
V +E++ +L GR
Sbjct: 312 VQFRDPNQAREALEKMNGFDLAGR 335
>gi|83643064|ref|YP_431499.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631107|gb|ABC27074.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 90
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+YVGNL + TE ++ +A S G + + + GQSKGF V + + +
Sbjct: 2 NIYVGNLAYGVTEEELREAFSSFG--EVTSANLIIDRNTGQSKGFAFVEMSNNSEADAAI 59
Query: 132 ERLPTLELHGRKPMV 146
+ L L GR V
Sbjct: 60 KGLNDTALKGRNIKV 74
>gi|9588100|dbj|BAB03467.1| RNA binding protein p40 AUF1 [Rattus norvegicus]
Length = 304
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 55 HHRYSHHHSQATSSS--HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQ 112
H S H++A ++ +++G L+W TT+ D+ D G D +D + G+
Sbjct: 77 HSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG--DVVDCTLKLDPITGR 134
Query: 113 SKGFCTVTLGSEESMSLVMER 133
S+GF V ES+ VM++
Sbjct: 135 SRGFGFVLFKESESVDKVMDQ 155
>gi|326925689|ref|XP_003209043.1| PREDICTED: transformer-2 protein homolog beta-like [Meleagris
gallopavo]
Length = 302
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 57 RYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGF 116
R H ++A +C L V L+ +TTE D+ + G DV + + +S+GF
Sbjct: 117 RRRHIGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYG--PIADVSIVYDQQSRRSRGF 174
Query: 117 CTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
V + E ER +EL GR+ V +
Sbjct: 175 AFVYFENVEDAKEAKERANGMELDGRRIRVDF 206
>gi|365760130|gb|EHN01872.1| Ist3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 167
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+Y+GNL TE D+ GVP +DV + + G+S+GF + + S L ++
Sbjct: 33 VYIGNLNKELTEGDILTVFSEYGVP--VDVMLSRDENTGESQGFAYLKYEDQRSTILAVD 90
Query: 133 RLPTLELHGR 142
L +++ GR
Sbjct: 91 NLNGVKVGGR 100
>gi|346471403|gb|AEO35546.1| hypothetical protein [Amblyomma maculatum]
Length = 271
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
++S C L V L+ +T E D+ + G DV+ +A +G+S+GF V + E
Sbjct: 122 NTSRC-LGVFGLSLYTQERDLKEVFSKYG--PLEDVQVVYDAQSGRSRGFAFVYFETVED 178
Query: 127 MSLVMERLPTLELHGRKPMVAY 148
+R LE+ GRK V Y
Sbjct: 179 AKAAKDRCNGLEIDGRKIRVDY 200
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSI--GVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+Y GNL W +D +R++ G +D + G+S+GF V+ + E
Sbjct: 212 KIYAGNLGWGV----RADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQA 267
Query: 130 VMERLPTLELHGR 142
+E L +EL GR
Sbjct: 268 ALESLDGVELEGR 280
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VGNL + T +++ G D D + + +S+GF VT+ + E + ++
Sbjct: 114 LFVGNLPYTYTSEELAQVFSEAGRVD--DAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQ 171
Query: 133 RLPTLELHGRKPMVAYP 149
L GR V YP
Sbjct: 172 MFDGALLGGRTARVNYP 188
>gi|327293227|ref|XP_003231310.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326466426|gb|EGD91879.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 592
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 59 SHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCT 118
+H ++ S LYVGN+ + TE+D+ + G DF+ ++ E G+SKG+
Sbjct: 287 AHSNNNQQSIPFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREE---TGRSKGYGF 343
Query: 119 VTLGSEESMSLVMERLPTLELHGR 142
V +E++ +L GR
Sbjct: 344 VQFRDPNQAREALEKMNGFDLAGR 367
>gi|242820506|ref|XP_002487523.1| nucleic acid-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218713988|gb|EED13412.1| nucleic acid-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 411
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL + T D+ + ++S GV I+ + + G SKGF VT S E+ ++
Sbjct: 210 VYVGNLFFDVTAEDLKNRMQSYGV---IEKATIIHDARGLSKGFGYVTFDSVEAAQRAID 266
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQFEAQNPLRSRSR 168
+ GR+ VL QF A P +SR
Sbjct: 267 EMSQQIYEGRR---------VLVQFSASGPSEKQSR 293
>gi|308807591|ref|XP_003081106.1| Ps16 protein (ISS) [Ostreococcus tauri]
gi|116059568|emb|CAL55275.1| Ps16 protein (ISS) [Ostreococcus tauri]
Length = 1094
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YVGNL+W T+ +++ D D ++ G+S+GF V++ +EE +
Sbjct: 916 VYVGNLSWGVTDESLAELFSEF---DVRDASVMKDRETGRSRGFAFVSMNNEEDVERASA 972
Query: 133 RLPTLELHGRK 143
L E+ GR+
Sbjct: 973 ALNGREVDGRE 983
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+Y GNL+W + D+ D G + D + + G+S+GF VT+ + V+
Sbjct: 1017 VYFGNLSWGMDQYDLQDLCSEFGSVE--DSRLITDRDTGRSRGFGFVTMSNTTEADEVVA 1074
Query: 133 RLPTLELHGRKPMVAYPTRN 152
+L ++ GR V T N
Sbjct: 1075 QLNGQDVDGRVLRVNIATSN 1094
>gi|410077429|ref|XP_003956296.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
gi|372462880|emb|CCF57161.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
Length = 479
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 61 HHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVT 120
H S +C +++G L W TTE + D G D+K ++++ G+S+GF +T
Sbjct: 84 HVKADISKDNCKMFIGGLNWETTEETLRDYFNKYG--HVTDLKIMKDSNTGRSRGFGFLT 141
Query: 121 LGSEESMSLVME 132
S+ V++
Sbjct: 142 FEHPSSVDEVVK 153
>gi|326503656|dbj|BAJ86334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 41 PFPEHTGRSPARYRHHR--YSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPD 98
P P SP +R + S+ S +YVGNL+W ++ +++ G
Sbjct: 151 PPPPKDQSSPRGFREQSGGFRQQSSRGPSGGDNRVYVGNLSWNVDDSALANLFNEQG--S 208
Query: 99 FIDVKFFENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRK 143
+ + + +G+S+GF VT G+ + + + L ++ GR+
Sbjct: 209 VLGARVIYDRESGRSRGFGFVTYGTSDEVQKAVSNLDGTDMDGRQ 253
>gi|307200669|gb|EFN80772.1| Splicing factor, arginine/serine-rich 10 [Harpegnathos saltator]
Length = 164
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S C L V L+ +TTE + G + + V +A G+S+GFC V GS E
Sbjct: 17 SRC-LGVFGLSIFTTEQQIHHIFSKYGPVERVQVVI--DAKTGRSRGFCFVYFGSSEDAK 73
Query: 129 LVMERLPTLELHGRKPMVAY 148
+ E+ +E+ GR+ V +
Sbjct: 74 VAKEQCTGMEIDGRRIRVDF 93
>gi|226497258|ref|NP_001140274.1| uncharacterized protein LOC100272318 [Zea mays]
gi|194698792|gb|ACF83480.1| unknown [Zea mays]
gi|414883568|tpg|DAA59582.1| TPA: ribonucleoprotein [Zea mays]
Length = 341
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSI--GVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSL 129
+Y GNL W +D +R++ G +D + G+S+GF V+ + E
Sbjct: 212 KIYAGNLGWGV----RADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQA 267
Query: 130 VMERLPTLELHGR 142
+E L +EL GR
Sbjct: 268 ALESLDGVELEGR 280
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VGNL + T +++ G D D + + +S+GF VT+ + E + ++
Sbjct: 114 LFVGNLPYTYTSEELAQVFSEAGRVD--DAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQ 171
Query: 133 RLPTLELHGRKPMVAYP 149
L GR V YP
Sbjct: 172 MFDGALLGGRTARVNYP 188
>gi|393783984|ref|ZP_10372153.1| hypothetical protein HMPREF1071_03021 [Bacteroides salyersiae
CL02T12C01]
gi|392667643|gb|EIY61150.1| hypothetical protein HMPREF1071_03021 [Bacteroides salyersiae
CL02T12C01]
Length = 81
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+Y+GNL++ EAD+ + G D VK + +SKGF V + ++ V+
Sbjct: 2 NMYIGNLSYRVKEADLRQVMEEYGTVD--SVKLIIDRDTRKSKGFAFVEMPNDAEAKNVI 59
Query: 132 ERLPTLELHGRKPMV 146
L E GR +V
Sbjct: 60 SELNGAEYEGRAMVV 74
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 17/109 (15%)
Query: 67 SSSHCN------LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVT 120
SS H N LYVGN+ + TE D+ + G +F+ + + +G+S+G+ V
Sbjct: 277 SSGHPNSVPFHRLYVGNIHFSITETDLQNVFEPFGELEFVQL---QKDDSGRSRGYGFVQ 333
Query: 121 LGSEESMSLVMERLPTLELHGRKPMVAY--------PTRNVLYQFEAQN 161
+E++ +L GR V T N+L F+ QN
Sbjct: 334 FRDAGQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLLRGFQGQN 382
>gi|285808363|gb|ADC35892.1| RNP-1 like RNA-binding protein [uncultured bacterium 246]
Length = 104
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N++VGN+++ TTE ++ A + G + ++ + GQ++GF V + ++E + +
Sbjct: 3 NVFVGNMSFQTTEGELRAAFETYG--EIARIQIMTDRDTGQARGFAFVEMTNDEDAAKAI 60
Query: 132 ERLPTLELHGR 142
L +L GR
Sbjct: 61 AGLNGTQLDGR 71
>gi|380017405|ref|XP_003692647.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
florea]
Length = 439
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W TT+ ++ G + ID +N+ +G+S+GF VT ++ LV++
Sbjct: 15 LFVGGLSWETTQENLQRYFGRYG--EVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQ 72
Query: 133 RLPTLELHGR 142
P +L GR
Sbjct: 73 NGPH-QLDGR 81
>gi|340519805|gb|EGR50043.1| predicted protein [Trichoderma reesei QM6a]
Length = 362
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Query: 46 TGRSPARYRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVP-DFIDVKF 104
+GRS R + + H+ + + + + L WWTT+ D+ +R + ++ F
Sbjct: 64 SGRSEDR-KSEEHEHNDRPVDNGATAAIMISELNWWTTDDDIRGWLRKANCEREVKELTF 122
Query: 105 FENASNGQSKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRNVLYQFEAQNPLR 164
E+ NG+SKG V + ++ + + T+ G +P T + Y NP R
Sbjct: 123 SEHKVNGKSKGQAYVEFHTRQASTAAKRYIDTVASEGVQPGQKKMT--ISYWNPGVNPFR 180
Query: 165 S 165
+
Sbjct: 181 T 181
>gi|281353862|gb|EFB29446.1| hypothetical protein PANDA_010269 [Ailuropoda melanoleuca]
Length = 157
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 48 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 105
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 106 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 138
>gi|390178414|ref|XP_001359012.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859439|gb|EAL28155.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 310
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 24 VSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--LYVGNLTWW 81
V +E + D DVT G + S H S ++ + L+VG L+W
Sbjct: 6 VDSEMNGEDFTKDVTTNDVSSENGDAAGAAGSTNGSEHTSAVSNQRDDDRKLFVGGLSWE 65
Query: 82 TTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
TTE ++ D G + I+VK + G+S+GF + + E++ V
Sbjct: 66 TTEKELRDHFGKFGEIESINVK--TDPQTGRSRGFAFIVFTNTEAIDKV 112
>gi|145354241|ref|XP_001421399.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581636|gb|ABO99692.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 288
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
C Y GNL W T+E ++ S GV + + + S G+SKG+ V + E
Sbjct: 112 CRCYFGNLAWETSEETLTSHCASFGV-NVVQCEVARQ-SGGRSKGWALVDFATPEEAQNA 169
Query: 131 MERLPTLELHGRKPMV 146
+E++ E+ GR +V
Sbjct: 170 IEQMHNSEIQGRSIIV 185
>gi|15231817|ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|186511018|ref|NP_850692.2| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein cp29; Flags: Precursor
gi|6729497|emb|CAB67653.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|18655393|gb|AAL76152.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|21593426|gb|AAM65393.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|332645568|gb|AEE79089.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645569|gb|AEE79090.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645570|gb|AEE79091.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 342
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL+W + + + G ++ + + +G+SKGF VTL S + + +
Sbjct: 259 LYVGNLSWGVDDMALENLFNEQG--KVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 316
Query: 133 RLPTLELHGRKPMVA 147
L +L GR+ V+
Sbjct: 317 SLNGADLDGRQIRVS 331
>gi|681902|dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 334
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL+W + + + G ++ + + +G+SKGF VTL S + + +
Sbjct: 251 LYVGNLSWGVDDMALENLFNEQG--KVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 308
Query: 133 RLPTLELHGRKPMVA 147
L +L GR+ V+
Sbjct: 309 SLNGADLDGRQIRVS 323
>gi|383142217|gb|AFG52468.1| Pinus taeda anonymous locus CL931Contig1_02 genomic sequence
Length = 85
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
S+ ++VGNL W A +++ + G D V+ + G+S+GF VT+ ++E
Sbjct: 14 SADIKVFVGNLPWSVDSAKLAELFKDPG--DVTMVEVIYDRQTGRSRGFAFVTMATQEDA 71
Query: 128 SLVMERLPTLELHG 141
+E+L E G
Sbjct: 72 DSAVEKLNGYEYQG 85
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
+YVGNL+W TT+ + A + G + +D + G+S+GF VT S +
Sbjct: 4 AKIYVGNLSWNTTDDTLRQAFSTFG--NVVDSVVMRDRDTGRSRGFGFVTYSSTQEAESA 61
Query: 131 MERLPTLELHGRKPMV 146
+ L +L GR+ V
Sbjct: 62 ISGLNDQDLDGRRIKV 77
>gi|299471941|emb|CBN79621.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 362
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
++VGNL+W TT D+ + S+G + + + +A +G+SKG+ VT +E
Sbjct: 54 VFVGNLSWGTTSEDLRTFMGSLG--EVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIE 111
Query: 133 RLPTLELHGR 142
+L +L GR
Sbjct: 112 QLNNADLGGR 121
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
C ++VGNL W TT+ D+ ++ G V+ A +G+SKG+ V S
Sbjct: 285 CTVFVGNLAWGTTDDDLLATFQTAGAVVSAHVQI---APSGRSKGWGLVKYSSPTETETA 341
Query: 131 MERLPTLELHGRKPMV 146
+ L LH R+ V
Sbjct: 342 VTELNNTMLHERRLTV 357
>gi|291401535|ref|XP_002717031.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Oryctolagus
cuniculus]
Length = 448
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 53 YRHHRYSHHHSQATSSS--HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASN 110
+ H S H++A ++ +++G L+W TT+ D+ D G + +D +
Sbjct: 170 FGHSNSSPRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFG--EVVDCTLKLDPIT 227
Query: 111 GQSKGFCTVTLGSEESMSLVMER 133
G+S+GF V ES+ VM++
Sbjct: 228 GRSRGFGFVLFKESESVDKVMDQ 250
>gi|681904|dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 326
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL+W + + + G ++ + + +G+SKGF VTL S + + +
Sbjct: 243 LYVGNLSWGVDDMALENLFNEQG--KVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 300
Query: 133 RLPTLELHGRKPMVA 147
L +L GR+ V+
Sbjct: 301 SLNGADLDGRQIRVS 315
>gi|74152700|dbj|BAE42623.1| unnamed protein product [Mus musculus]
Length = 212
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 102 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 159
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 160 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 192
>gi|302499164|ref|XP_003011578.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
gi|291175130|gb|EFE30938.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
Length = 594
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 59 SHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCT 118
+H ++ S LYVGN+ + TE+D+ + G DF+ ++ E G+SKG+
Sbjct: 289 AHSNNNQQSIPFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREE---AGRSKGYGF 345
Query: 119 VTLGSEESMSLVMERLPTLELHGR 142
V +E++ +L GR
Sbjct: 346 VQFRDPNQAREALEKMNGFDLAGR 369
>gi|116780918|gb|ABK21879.1| unknown [Picea sitchensis]
Length = 172
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A++ +VG L W T + + DA G + ++ K + G+S+GF VT E
Sbjct: 3 ASAEVEYRCFVGGLAWATDDRSLQDAFSPFG--EILESKIISDRETGRSRGFGFVTFSDE 60
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
+SM ++ + L GR V
Sbjct: 61 QSMRDAIDAMNGKVLDGRNITV 82
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
+YVGNL+W TT+ + A G +D + G+S+GF VT S
Sbjct: 3 AKVYVGNLSWNTTDDSLRTAFSQFG--QILDSIVMRDRDTGRSRGFGFVTFSSANEAQTA 60
Query: 131 MERLPTLELHGRKPMV 146
+ L EL GR+ V
Sbjct: 61 ITSLNEQELDGRRIRV 76
>gi|195156455|ref|XP_002019115.1| GL26194 [Drosophila persimilis]
gi|194115268|gb|EDW37311.1| GL26194 [Drosophila persimilis]
Length = 223
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W TT+ ++S G D ID +N +G+S+GF VT +++ V++
Sbjct: 9 LFVGGLSWETTQENLSRYFCRFG--DIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 133 RLP 135
P
Sbjct: 67 NGP 69
>gi|195144350|ref|XP_002013159.1| GL23974 [Drosophila persimilis]
gi|194102102|gb|EDW24145.1| GL23974 [Drosophila persimilis]
Length = 341
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 24 VSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--LYVGNLTWW 81
V +E + D DVT G + S H S ++ + L+VG L+W
Sbjct: 6 VDSEMNGEDFTKDVTTNDVSSENGDAAGAAGSTNGSEHTSAVSNQRDDDRKLFVGGLSWE 65
Query: 82 TTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
TTE ++ D G + I+VK + G+S+GF + + E++ V
Sbjct: 66 TTEKELRDHFGKFGEIESINVK--TDPQTGRSRGFAFIVFTNTEAIDKV 112
>gi|116786296|gb|ABK24055.1| unknown [Picea sitchensis]
Length = 299
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
S++ ++VGNL W A++++ + G D V+ + G+S+GF VT+ ++
Sbjct: 110 SANLKVFVGNLPWSVDSAELAELFKDSG--DVTMVEVIYDRQTGRSRGFAFVTMATQADA 167
Query: 128 SLVMERLPTLELHGR 142
+E+ E GR
Sbjct: 168 DEAVEKFNGYEYQGR 182
>gi|156837267|ref|XP_001642663.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113219|gb|EDO14805.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 526
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S C +++G L W TTE + D G +++K ++ + G+S+GF +T S
Sbjct: 152 SKDSCKMFIGGLNWETTEETLRDYFNKYGK--VVELKIMKDNNTGRSRGFGFLTFEDATS 209
Query: 127 MSLVMERLPTLELHGRKPMVAYP 149
+ V++ L+ P A P
Sbjct: 210 VDEVVKTQHILDGKVIDPKRAIP 232
>gi|127139464|ref|NP_001076009.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Rattus
norvegicus]
gi|149046817|gb|EDL99591.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_b [Rattus
norvegicus]
Length = 304
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 55 HHRYSHHHSQATSSS--HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQ 112
H S H++A ++ +++G L+W TT+ D+ D G D +D + G+
Sbjct: 77 HSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG--DVVDCTLKLDPITGR 134
Query: 113 SKGFCTVTLGSEESMSLVMER 133
S+GF V ES+ VM++
Sbjct: 135 SRGFGFVLFKESESVDKVMDQ 155
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T++ + +A + G + ++ K + G+S+GF VT +E+SM +E
Sbjct: 11 FVGGLAWATSDKALEEAFSAYG--EVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ L GR V
Sbjct: 69 MNGQNLDGRNITV 81
>gi|18076086|emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 74 YVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+VG L W T++ + +A + G + ++ K + G+S+GF VT +E+SM +E
Sbjct: 11 FVGGLAWATSDKALEEAFSAYG--EVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEG 68
Query: 134 LPTLELHGRKPMV 146
+ L GR V
Sbjct: 69 MNGQNLDGRNITV 81
>gi|403213324|emb|CCK67826.1| hypothetical protein KNAG_0A01370 [Kazachstania naganishii CBS
8797]
Length = 545
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S +C +++G L W TTE + + G ID+K ++ ++G+S+GF +T S
Sbjct: 153 SKDNCKMFIGGLNWETTEDGLREYFNKYG--HVIDLKIMKDPNSGRSRGFGFLTFEEPSS 210
Query: 127 MSLVME 132
+ V++
Sbjct: 211 VDEVVK 216
>gi|222101818|gb|ACM44033.1| hnRNPA/B-like 28 [Bombyx mori]
Length = 256
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VG L+W T++ ++ G + ID +N+ +G+S+GF VT ++LV+
Sbjct: 14 KLFVGGLSWETSQENLQRYFSRYG--EVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVL 71
Query: 132 ERLPTLELHGR 142
+ P +L GR
Sbjct: 72 QNGPH-QLDGR 81
>gi|154490181|ref|ZP_02030442.1| hypothetical protein PARMER_00413 [Parabacteroides merdae ATCC
43184]
gi|218259816|ref|ZP_03475388.1| hypothetical protein PRABACTJOHN_01047 [Parabacteroides johnsonii
DSM 18315]
gi|423344429|ref|ZP_17322141.1| hypothetical protein HMPREF1077_03571 [Parabacteroides johnsonii
CL02T12C29]
gi|423347880|ref|ZP_17325565.1| hypothetical protein HMPREF1060_03237 [Parabacteroides merdae
CL03T12C32]
gi|423721883|ref|ZP_17696059.1| hypothetical protein HMPREF1078_00122 [Parabacteroides merdae
CL09T00C40]
gi|154089073|gb|EDN88117.1| hypothetical protein PARMER_00413 [Parabacteroides merdae ATCC
43184]
gi|218224891|gb|EEC97541.1| hypothetical protein PRABACTJOHN_01047 [Parabacteroides johnsonii
DSM 18315]
gi|409212827|gb|EKN05861.1| hypothetical protein HMPREF1077_03571 [Parabacteroides johnsonii
CL02T12C29]
gi|409215366|gb|EKN08367.1| hypothetical protein HMPREF1060_03237 [Parabacteroides merdae
CL03T12C32]
gi|409242896|gb|EKN35655.1| hypothetical protein HMPREF1078_00122 [Parabacteroides merdae
CL09T00C40]
Length = 81
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+Y+GNL + E+D+ + G + VK + +SKGF L +E +
Sbjct: 2 NIYIGNLNYRVRESDLQQVLEEYGTVE--SVKLIIDRDTRRSKGFAFAELPNENEARNAI 59
Query: 132 ERLPTLELHGRKPMVAYPT 150
E L E GR+ +V T
Sbjct: 60 EELNGAEYEGRQMVVKEAT 78
>gi|426344801|ref|XP_004038942.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Gorilla gorilla gorilla]
Length = 291
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 47 GRSPARYR--HHRYSHHHSQATSSS--HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDV 102
G AR R H S HS+A ++ +++G L+W TT+ D+ D G + +D
Sbjct: 5 GAIKARRRQDHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG--EVVDC 62
Query: 103 KFFENASNGQSKGFCTVTLGSEESMSLVMER 133
+ G+S+GF V ES+ VM++
Sbjct: 63 TLKLDPITGRSRGFGFVLFKESESVDKVMDQ 93
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
gi|75337808|sp|Q9SX80.1|R47CP_ARATH RecName: Full=Polyadenylate-binding protein RBP47C';
Short=Poly(A)-binding protein RBP47C'; AltName:
Full=RNA-binding protein 47C'; Short=AtRBP47C prime;
Short=AtRBP47C'
gi|5668811|gb|AAD46037.1|AC007519_22 Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424
comes from this gene [Arabidopsis thaliana]
gi|110743035|dbj|BAE99410.1| hypothetical protein [Arabidopsis thaliana]
gi|124301030|gb|ABN04767.1| At1g47500 [Arabidopsis thaliana]
gi|332194057|gb|AEE32178.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 52 RYRHHRYSHH------HSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFF 105
+Y +H + HH H A + + ++VG+L W EA ++ A S + + +K
Sbjct: 78 QYPNHHHFHHQSRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVI 137
Query: 106 ENASNGQSKGFCTVTLGSEESMSLVMERL 134
N NG S+G+ V S + V++
Sbjct: 138 RNKHNGSSEGYGFVEFESHDVADKVLQEF 166
>gi|383857431|ref|XP_003704208.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Megachile rotundata]
Length = 443
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W TT+ ++ G + ID +N+ +G+S+GF VT ++ LV++
Sbjct: 15 LFVGGLSWETTQENLQRYFGRYG--EVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQ 72
Query: 133 RLPTLELHGR 142
P +L GR
Sbjct: 73 NGPH-QLDGR 81
>gi|359806184|ref|NP_001240946.1| uncharacterized protein LOC100812934 [Glycine max]
gi|255639723|gb|ACU20155.1| unknown [Glycine max]
Length = 279
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S S ++VGNL W + + R G ++ + + +G+S+GF VT GS +
Sbjct: 191 SDSENRVHVGNLAWGVDDVALESLFREQG-KKVLEARVIYDRESGRSRGFGFVTFGSPDE 249
Query: 127 MSLVMERLPTLELHGRKPMVA 147
+ ++ L ++L+GR V+
Sbjct: 250 VKSAIQSLDGVDLNGRAIRVS 270
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 68 SSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESM 127
S L+VGNL + A +++ S G + ++V + + + G+S+GF VT+ S E
Sbjct: 86 SRDLKLFVGNLPFSVDSARLAELFESAGNVEVVEVIY--DKTTGRSRGFGFVTMSSVEEA 143
Query: 128 SLVMERLPTLELHGRKPMVAY---PTRN 152
++ EL GR V P RN
Sbjct: 144 EAAAKQFNGYELDGRSLRVNSGPPPARN 171
>gi|291394539|ref|XP_002713870.1| PREDICTED: transformer-2 alpha [Oryctolagus cuniculus]
Length = 330
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 152 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 209
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 210 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 242
>gi|365153971|ref|ZP_09350405.1| hypothetical protein HMPREF1019_01088 [Campylobacter sp. 10_1_50]
gi|158605004|gb|EAT99377.3| 31 kDa ribonucleoprotein, (RNA-binding proteinRNP-T) (RNA-binding
protein 1/2/3) (AtRBP33) (RNA-binding proteincp31)
[Campylobacter concisus 13826]
gi|363650683|gb|EHL89770.1| hypothetical protein HMPREF1019_01088 [Campylobacter sp. 10_1_50]
Length = 81
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
N+YVGNL++ TTEA++ +A G + K ++ +SKGF V + +
Sbjct: 2 NIYVGNLSYRTTEAELKEAFAQFG--EVRRAKIVKDRETDRSKGFGFVEMDDANEGQKAI 59
Query: 132 ERLPTLELHGR 142
+ L EL GR
Sbjct: 60 DALNEKELGGR 70
>gi|122890334|emb|CAJ74077.1| RNA recognition motif 1 [Guillardia theta]
Length = 199
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W + + +A + G + K + +G+S+GF VT E S + +E
Sbjct: 90 LFVGGLSWEVDDQQLMEAFQEFGN---CEAKVMVDRYSGRSRGFGFVTFSEEHSAAKAIE 146
Query: 133 RLPTLELHGRKPMVAYPTRNVLYQ 156
+ EL GR+ V + + + Q
Sbjct: 147 EMNGRELLGRQITVTHARQKIYEQ 170
>gi|242063480|ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
gi|241932860|gb|EES06005.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
Length = 295
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VGNL+W T +++A G + + + + G+S+G+ V ++E M +
Sbjct: 216 KLFVGNLSWTVTSEMLTEAFGRCG--NVVGARVLYDGETGRSRGYGFVCYSTKEEMDEAI 273
Query: 132 ERLPTLELHGRKPMV 146
L EL GR+ V
Sbjct: 274 SSLNGTELEGREIRV 288
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A++++ LY GNL + A ++ ++ P+ ++V + + G+S+GF VT+ +
Sbjct: 118 ASTTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLY--DRITGRSRGFAFVTMTTV 175
Query: 125 ESMSLVMERLPTLELHGRKPMVAYPTR 151
+ LV++ L GR V + R
Sbjct: 176 QDCELVIKNLDGSLYGGRTMKVNFADR 202
>gi|297820076|ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
gi|297323759|gb|EFH54180.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL+W + + + G ++ + + +G+SKGF VTL S + + +
Sbjct: 256 LYVGNLSWGVDDMALENLFNEQG--KVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 313
Query: 133 RLPTLELHGRKPMVA 147
L +L GR+ V+
Sbjct: 314 SLNGADLDGRQIRVS 328
>gi|385454|gb|AAB26988.1| SqdA [Drosophila melanogaster]
Length = 321
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 22 EHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--LYVGNLT 79
+ V TE + D DVT G + A + S + S A+ + L+VG L+
Sbjct: 5 KQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGGLS 64
Query: 80 WWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
W TTE ++ D G + I+VK + G+S+GF + + E++ V
Sbjct: 65 WETTEKELRDHFGKYGEIESINVK--TDPQTGRSRGFAFIVFTNTEAIDKV 113
>gi|361125200|gb|EHK97251.1| putative Cleavage and polyadenylation specificity factor subunit 6
[Glarea lozoyensis 74030]
Length = 385
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFI-DVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L + +L WW T+ D+ + V D + D+ F E+ NG+SKG V S+++ +
Sbjct: 121 LLISDLHWWNTDDDIRGWVNQAQVEDELKDITFSEHKVNGKSKGQAYVEFSSQQAATAAK 180
Query: 132 ERLPTL---ELHGRKPMVAYPTRNVLYQFEAQNPLRS 165
++ + + +K V Y NV NP R+
Sbjct: 181 HKIDAFGEGQQYVKKHTVTYSNPNV-------NPFRT 210
>gi|356538789|ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 140
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+VG L W T + + A G + ++ K + G+S+GF VT SE SM +E
Sbjct: 10 CFVGGLAWATDDHALEKAFSHYG--NIVESKIINDRETGRSRGFGFVTFASENSMKDAIE 67
Query: 133 RLPTLELHGRKPMV 146
+ L GR V
Sbjct: 68 GMNGQNLDGRNITV 81
>gi|162462398|ref|NP_001104824.1| hnRNPA/B-like 28 [Bombyx mori]
gi|161334098|gb|ABX60898.1| hnRNPA/B-like protein [Bombyx mori]
Length = 250
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VG L+W T++ ++ G + ID +N+ +G+S+GF VT ++LV+
Sbjct: 8 KLFVGGLSWETSQENLQRYFSRYG--EVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVL 65
Query: 132 ERLPTLELHGR 142
+ P +L GR
Sbjct: 66 QNGPH-QLDGR 75
>gi|323448546|gb|EGB04443.1| hypothetical protein AURANDRAFT_32583 [Aureococcus anophagefferens]
Length = 240
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
++VGNL+W T+ D+ D R G + E G+SKG V S + +L +
Sbjct: 26 RVFVGNLSWQTSWQDLKDHFRQCGT--VVHASVMEE-RPGRSKGCGIVEFESADEAALAI 82
Query: 132 ERLPTLELHGRKPMV 146
E L +EL GR V
Sbjct: 83 ETLHDVELDGRPVQV 97
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
+YVGNL W T+ D+ D R G + K E G+SKG+ V + E +
Sbjct: 159 RVYVGNLAWGTSWQDLKDHFRQCG--SVVHAKVMEE-RPGRSKGWGIVEFEAPEEAVAAI 215
Query: 132 ERLPTLELHGR 142
E+L +L GR
Sbjct: 216 EQLNDSDLDGR 226
>gi|426232266|ref|XP_004010154.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Ovis aries]
Length = 421
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 55 HHRYSHHHSQATSSS--HCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQ 112
H S HS+A ++ +++G L+W TT+ D+ D G + +D + G+
Sbjct: 145 HSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG--EVVDCTLKLDPITGR 202
Query: 113 SKGFCTVTLGSEESMSLVMER 133
S+GF V ES+ VM++
Sbjct: 203 SRGFGFVLFKESESVDKVMDQ 223
>gi|24646609|ref|NP_731826.1| squid, isoform A [Drosophila melanogaster]
gi|11038|emb|CAA44503.1| hrp40.1 [Drosophila melanogaster]
gi|21428420|gb|AAM49870.1| LD09691p [Drosophila melanogaster]
gi|23171185|gb|AAF54964.2| squid, isoform A [Drosophila melanogaster]
gi|220943526|gb|ACL84306.1| sqd-PA [synthetic construct]
gi|220953540|gb|ACL89313.1| sqd-PA [synthetic construct]
Length = 321
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 22 EHVSTEHDDIDLYDDVTLQPFPEHTGRSPARYRHHRYSHHHSQATSSSHCN--LYVGNLT 79
+ V TE + D DVT G + A + S + S A+ + L+VG L+
Sbjct: 5 KQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGGLS 64
Query: 80 WWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
W TTE ++ D G + I+VK + G+S+GF + + E++ V
Sbjct: 65 WETTEKELRDHFGKYGEIESINVK--TDPQTGRSRGFAFIVFTNTEAIDKV 113
>gi|398394979|ref|XP_003850948.1| hypothetical protein MYCGRDRAFT_28783, partial [Zymoseptoria
tritici IPO323]
gi|339470827|gb|EGP85924.1| hypothetical protein MYCGRDRAFT_28783 [Zymoseptoria tritici IPO323]
Length = 90
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
+YV NL W T++ D+ + ++IG+ + +V++ +NG+ +G V GS+ + +
Sbjct: 15 IYVKNLPWATSDDDLVELFQTIGIVERAEVQY---KANGRHRGAGVVQFGSQGDATTAIM 71
Query: 133 RLPTLELHGR 142
RL GR
Sbjct: 72 RLQGYSYGGR 81
>gi|334185950|ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645571|gb|AEE79092.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 363
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL+W + + + G ++ + + +G+SKGF VTL S + + +
Sbjct: 280 LYVGNLSWGVDDMALENLFNEQG--KVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 337
Query: 133 RLPTLELHGRKPMVA 147
L +L GR+ V+
Sbjct: 338 SLNGADLDGRQIRVS 352
>gi|298714936|emb|CBJ27692.1| RNA recognition motif-containing protein [Ectocarpus siliculosus]
Length = 346
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Query: 53 YRHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQ 112
+ R + A + NL+VGN+ + +E D+ + G + NG
Sbjct: 190 WTEDRVAATAEAAKKFAGFNLFVGNIPFSVSEKDLGAIFGNFGE---VKSTALVTDENGD 246
Query: 113 SKGFCTVTLGSEESMSLVMERLPTLELHGRKPMVAYPTRN 152
S+G+ +V +G+EE ++ L +E+ GR +V N
Sbjct: 247 SRGYGSVKMGTEEDGRKAIKALNGIEIQGRSMLVKVGASN 286
>gi|146415164|ref|XP_001483552.1| hypothetical protein PGUG_04281 [Meyerozyma guilliermondii ATCC
6260]
Length = 264
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S ++VGNL + + ++ D +R G DVK S G+S+GF TV +EE
Sbjct: 68 GQSGPEVFVGNLPFSVSWQNLKDLMREAGNVIRADVK---TDSWGKSRGFGTVIFSTEEE 124
Query: 127 MSLVMERLPTLELHGRK 143
+ +E+ ++ GR+
Sbjct: 125 AAYAIEKFQGYDMGGRR 141
>gi|367007988|ref|XP_003688723.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
gi|357527033|emb|CCE66289.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
Length = 518
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S C +++G L W TTE + D G +++K ++ + G+S+GF +T + S
Sbjct: 160 SKDSCKMFIGGLNWETTEDTLRDYFNKYG--SVVELKIMKDNNTGRSRGFGFLTFENASS 217
Query: 127 MSLVMERLPTLELHGRKPMVAYP 149
+ V++ L+ P A P
Sbjct: 218 VDEVVKTQHILDGKVIDPKRAIP 240
>gi|345197228|ref|NP_001230808.1| transformer-2 protein homolog beta isoform 2 [Homo sapiens]
gi|410037850|ref|XP_003950298.1| PREDICTED: transformer-2 protein homolog beta [Pan troglodytes]
gi|426343201|ref|XP_004038203.1| PREDICTED: transformer-2 protein homolog beta isoform 2 [Gorilla
gorilla gorilla]
gi|441633316|ref|XP_004089753.1| PREDICTED: transformer-2 protein homolog beta isoform 2 [Nomascus
leucogenys]
gi|4377849|gb|AAD19278.1| transformer-2-beta isoform 3 [Homo sapiens]
gi|119598610|gb|EAW78204.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_a [Homo sapiens]
gi|119598611|gb|EAW78205.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_a [Homo sapiens]
gi|119598614|gb|EAW78208.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_a [Homo sapiens]
gi|194375203|dbj|BAG62714.1| unnamed protein product [Homo sapiens]
Length = 188
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 57 RYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGF 116
R H ++A +C L V L+ +TTE D+ + G DV + + +S+GF
Sbjct: 4 RRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGP--IADVSIVYDQQSRRSRGF 61
Query: 117 CTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
V + + ER +EL GR+ V +
Sbjct: 62 AFVYFENVDDAKEAKERANGMELDGRRIRVDF 93
>gi|4803739|dbj|BAA77512.1| cold-inducible RNA-binding protein [Ciona intestinalis]
Length = 158
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
++C ++VGNL++ TE D+ G + +V + G+S+GF VT SE +
Sbjct: 2 ANCKVFVGNLSYNATEDDLRKHFSGSGQVE--EVAIICDRETGRSRGFAFVTFSSEGEAN 59
Query: 129 LVMERLPTLELHGRKPMV 146
+E L ++ GR V
Sbjct: 60 DAIENLNESDVAGRNVSV 77
>gi|260829407|ref|XP_002609653.1| hypothetical protein BRAFLDRAFT_123569 [Branchiostoma floridae]
gi|229295015|gb|EEN65663.1| hypothetical protein BRAFLDRAFT_123569 [Branchiostoma floridae]
Length = 297
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L++G+L + E + +A S+G P I VK +N G GFC V G ++ +
Sbjct: 4 LWMGDLEPYMDEPFIMNAFASMGEP-IISVKLIKNRQTGGPAGFCFVDFGDQQLAERALT 62
Query: 133 RLPTLELHG 141
RL +L G
Sbjct: 63 RLSGKQLPG 71
>gi|196230311|ref|ZP_03129174.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196225908|gb|EDY20415.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 185
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 64 QATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENAS---NGQSKGFCTVT 120
+A + LYVGNL++ TE+D+S+ +G VK E S N +SKGF VT
Sbjct: 91 EAVEVTSPKLYVGNLSYDATESDLSELFNGVGT-----VKSAEIVSHKYNEKSKGFGFVT 145
Query: 121 LGSEESMSLVMERLPTLELHGRKPMVA 147
+ + + + L E GRK +V+
Sbjct: 146 MTTVDEAKRAVVELHDKEFMGRKLVVS 172
>gi|417408391|gb|JAA50749.1| Putative translation initiation factor 3 subunit g eif-3g, partial
[Desmodus rotundus]
Length = 180
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 70 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 127
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 128 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 160
>gi|406926747|gb|EKD62896.1| RNA-binding protein [uncultured bacterium]
Length = 134
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIG-VPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
LYVGNL++ T ++ G V D + + F + G+SKGF V + +EE+
Sbjct: 4 KLYVGNLSYTVTSDELRKLFAEAGTVVDAVVISFKDT---GRSKGFGFVEMETEEAAKAA 60
Query: 131 MERLPTLELHGRKPMV 146
+E+ ++ GRK +V
Sbjct: 61 IEKFNGSDMGGRKIIV 76
>gi|375148329|ref|YP_005010770.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361062375|gb|AEW01367.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 122
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 71 CNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLV 130
N+YVGNL+W T+ D+ G K ++ ++G+SKGF V + +
Sbjct: 1 MNIYVGNLSWQMTDEDLRTLFEQYG--SVTSAKIVKDKTSGRSKGFGFVEMPEDGEAQNA 58
Query: 131 MERLPTLELHGRKPMV 146
+ L E+ GRK +V
Sbjct: 59 LTSLYESEVLGRKIIV 74
>gi|298248948|ref|ZP_06972752.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
gi|297546952|gb|EFH80819.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
Length = 96
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
LYVGNL++ T+ ++ D IG V+ G+SKGF V + +E+ +E
Sbjct: 3 LYVGNLSYRITDQELGDFFAQIGRVQ--RVRVVTERETGRSKGFGFVDMLNEQDARAAIE 60
Query: 133 RLPTLELHGRKPMVA 147
+L L GR VA
Sbjct: 61 QLNGKRLGGRALTVA 75
>gi|255556984|ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 280
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 54 RHHRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQS 113
R R+ S LYVGNL+W + G +D K + +G+S
Sbjct: 179 RSPRFGGGGGGGESLEGNRLYVGNLSWSVDNLALESFFSEQG--KVVDAKVVYDRESGRS 236
Query: 114 KGFCTVTLGSEESMSLVMERLPTLELHGRKPMVA 147
+GF VT S E + ++ L EL GR V+
Sbjct: 237 RGFGFVTYSSAEEVENAIDSLNGAELDGRAIRVS 270
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 64 QATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGS 123
+++ S L+VGNL + A ++ S G + ++V + + G+S+GF VT+ S
Sbjct: 85 ESSFSQDLKLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIY--DKVTGRSRGFGFVTMSS 142
Query: 124 EESMSLVMERLPTLELHGR 142
+ + ++ EL GR
Sbjct: 143 IDEVEAAAQQFNGYELEGR 161
>gi|219363077|ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea mays]
gi|194698058|gb|ACF83113.1| unknown [Zea mays]
Length = 287
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 63 SQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLG 122
S A S++ LY GNL + A ++ ++ P+ ++V + + + G+S+GF VT+
Sbjct: 108 SVAASTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLY--DRTTGRSRGFAFVTMT 165
Query: 123 SEESMSLVMERLPTLELHGRKPMVAYPTR 151
+ + LV++ L GR V + R
Sbjct: 166 TVQDCELVIKNLDGSLYGGRTMKVNFADR 194
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VGNL+W T +++A G + + + G+S+G+ V + E M +
Sbjct: 208 KLFVGNLSWTVTSEMLTEAFGRCGT--VVGARVLYDGETGRSRGYGFVCYSTREEMDEAL 265
Query: 132 ERLPTLELHGRKPMV 146
L +E+ GR+ V
Sbjct: 266 SSLNGMEMEGREMRV 280
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 65 ATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSE 124
A++ +VG L W T + A G + ID K + G+S+GF VT E
Sbjct: 2 ASADVEYRCFVGGLAWATDSEALEKAFSQYG--EIIDSKIINDRETGRSRGFGFVTFADE 59
Query: 125 ESMSLVMERLPTLELHGRKPMV 146
+SM +E + ++ GR V
Sbjct: 60 KSMRDAIEGMNGQDMDGRNITV 81
>gi|154308771|ref|XP_001553721.1| hypothetical protein BC1G_07808 [Botryotinia fuckeliana B05.10]
gi|347831781|emb|CCD47478.1| hypothetical protein [Botryotinia fuckeliana]
Length = 381
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 69 SHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMS 128
S C L++GNL + ++AD++ R V + IDV+ + GQ +GF +S
Sbjct: 253 SKC-LFIGNLAFEMSDADLNSLFRE--VRNVIDVRVAIDRRTGQPRGFAHADFVDVDSAM 309
Query: 129 LVMERLPTLELHGRKPMVAY 148
+E+L E+ R+ V Y
Sbjct: 310 KALEQLQGKEVFNRRLRVDY 329
>gi|413939453|gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]
Length = 287
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 63 SQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLG 122
S A S++ LY GNL + A ++ ++ P+ ++V + + + G+S+GF VT+
Sbjct: 108 SVAASTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLY--DRTTGRSRGFAFVTMT 165
Query: 123 SEESMSLVMERLPTLELHGRKPMVAYPTR 151
+ + LV++ L GR V + R
Sbjct: 166 TVQDCELVIKNLDGSLYGGRTMKVNFADR 194
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 72 NLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVM 131
L+VGNL+W T +++A G + + + G+S+G+ V + E M +
Sbjct: 208 KLFVGNLSWTVTSEMLTEAFGRCGT--VVGARVLYDGETGRSRGYGFVCYSTREEMDEAL 265
Query: 132 ERLPTLELHGRKPMV 146
L +E+ GR+ V
Sbjct: 266 SSLNGMEMEGREMRV 280
>gi|326493824|dbj|BAJ85374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S S +YVGNL W ++ + + G +D + + G+S+GF VT+ S+E
Sbjct: 206 SGSSFRIYVGNLPWQVDDSRLVELFSEHG--KVVDARVVYDRDTGRSRGFGFVTMASQEE 263
Query: 127 MSLVMERLPTLELHGR 142
+ + L L GR
Sbjct: 264 LDDAIAALDGQSLEGR 279
>gi|190347835|gb|EDK40183.2| hypothetical protein PGUG_04281 [Meyerozyma guilliermondii ATCC
6260]
Length = 264
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 67 SSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEES 126
S ++VGNL + + ++ D +R G DVK S G+S+GF TV +EE
Sbjct: 68 GQSGPEVFVGNLPFSVSWQNLKDLMREAGNVIRADVK---TDSWGKSRGFGTVIFSTEEE 124
Query: 127 MSLVMERLPTLELHGRK 143
+ +E+ ++ GR+
Sbjct: 125 AAYAIEKFQGYDMGGRR 141
>gi|449266970|gb|EMC77948.1| Transformer-2 like protein beta, partial [Columba livia]
Length = 156
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 57 RYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGF 116
R H ++A +C L V L+ +TTE D+ + G DV + + +S+GF
Sbjct: 48 RRRHIGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYG--PIADVSIVYDQQSRRSRGF 105
Query: 117 CTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
V + E ER +EL GR+ V +
Sbjct: 106 AFVYFENVEDAKEAKERANGMELDGRRIRVDF 137
>gi|348564374|ref|XP_003467980.1| PREDICTED: transformer-2 protein homolog alpha-like [Cavia
porcellus]
Length = 393
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 56 HRYSHHHSQATSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKG 115
+R H S+A + L V L+ +TTE D+ + G ++V + + G+S+G
Sbjct: 109 NRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY--DQRTGRSRG 166
Query: 116 FCTVTLGSEESMSLVMERLPTLELHGRKPMVAY 148
F V + MER +EL GR+ V Y
Sbjct: 167 FAFVYFERIDDSKEAMERANGMELDGRRIRVDY 199
>gi|328779568|ref|XP_393451.4| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
mellifera]
Length = 442
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 73 LYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEESMSLVME 132
L+VG L+W TT+ ++ G + ID +N+ +G+S+GF VT ++ LV++
Sbjct: 15 LFVGGLSWETTQENLQRYFGRYG--EVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQ 72
Query: 133 RLPTLELHGR 142
P +L GR
Sbjct: 73 NGPH-QLDGR 81
>gi|302822192|ref|XP_002992755.1| hypothetical protein SELMODRAFT_4991 [Selaginella moellendorffii]
gi|300139400|gb|EFJ06141.1| hypothetical protein SELMODRAFT_4991 [Selaginella moellendorffii]
Length = 177
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 66 TSSSHCNLYVGNLTWWTTEADMSDAIRSIGVPDFIDVKFFENASNGQSKGFCTVTLGSEE 125
++SH +++GNL W + + + R+ G ++ K + G+S+GF VTL S +
Sbjct: 92 VAASHTKVFIGNLPWGVDDGSLEEFFRAHG--KVVEAKIVYDRDTGRSRGFGFVTLSSPK 149
Query: 126 SMSLVMERLPTLELHGRKPMV 146
++ L + GR+ V
Sbjct: 150 EADEAVKSLDGADCDGRRLRV 170
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,881,668,920
Number of Sequences: 23463169
Number of extensions: 118290720
Number of successful extensions: 331969
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 2090
Number of HSP's that attempted gapping in prelim test: 329543
Number of HSP's gapped (non-prelim): 3044
length of query: 172
length of database: 8,064,228,071
effective HSP length: 132
effective length of query: 40
effective length of database: 9,262,057,059
effective search space: 370482282360
effective search space used: 370482282360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)