BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8002
(469 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2WBY|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Insulin
pdb|2WBY|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Insulin
pdb|2WC0|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Iodinated Insulin
pdb|2WC0|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Iodinated Insulin
pdb|3H44|A Chain A, Crystal Structure Of Insulin Degrading Enzyme In Complex
With Macrophage Inflammatory Protein 1 Alpha
pdb|3H44|B Chain B, Crystal Structure Of Insulin Degrading Enzyme In Complex
With Macrophage Inflammatory Protein 1 Alpha
pdb|3OFI|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Ubiquitin
pdb|3OFI|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Ubiquitin
pdb|3N56|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human B-Type Natriuretic Peptide (Bnp)
pdb|3N56|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human B-Type Natriuretic Peptide (Bnp)
pdb|3N57|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human Atrial Natriuretic Peptide (Anp)
pdb|3N57|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human Atrial Natriuretic Peptide (Anp)
pdb|2YPU|A Chain A, Human Insulin Degrading Enzyme E111q In Complex With
Inhibitor Compound 41367
pdb|2YPU|B Chain B, Human Insulin Degrading Enzyme E111q In Complex With
Inhibitor Compound 41367
Length = 990
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/433 (49%), Positives = 308/433 (71%), Gaps = 15/433 (3%)
Query: 39 MKKWTN---------PSPNEFIATDFSLLPSDPDISPHPTILYNSPLIRAWHKQDDEYRV 89
+KKW N P+ NEFI T+F +LP + + +P+P ++ ++ + + W KQDD++ +
Sbjct: 481 IKKWQNADLNGKFKLPTKNEFIPTNFEILPLEKEATPYPALIKDTAMSKLWFKQDDKFFL 540
Query: 90 PKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLSNTKYGMML 149
PK N +FEF SP+AY+DP +NM +L++ L KD+LNEY+Y A+LAGL++DL NT YGM L
Sbjct: 541 PKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYL 600
Query: 150 GISGYSHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPYQHAIYSIS 209
+ GY+ KQ +LL K+++K+A F ID KR+EIIKE Y R L NF AEQP+QHA+Y +
Sbjct: 601 SVKGYNDKQPILLKKIIEKMATFE--IDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLR 658
Query: 210 LCLFERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKMLEE 269
L + E AW+K EL E+LD +T +L F LLS++ IEAL+HGN KQ L I++M+E+
Sbjct: 659 LLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVED 718
Query: 270 KLQTKLKAKPLLPSQLLRFREIKIPEKSNLVYETQNAVHKSSCIEAYYQCGVQELRDNVL 329
L KPLLPSQL+R+RE+++P++ VY+ +N VH +S IE YYQ +Q +N+
Sbjct: 719 TLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNSGIEIYYQTDMQSTSENMF 778
Query: 330 LELFYPIPDEHT----HYQEQLGYIVVSGIRKSSGVQGLRIIVQSDKHPLFVDSRIEAFL 385
LELF I E +EQLGYIV SG R+++G+QGLR I+QS+K P +++SR+EAFL
Sbjct: 779 LELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVEAFL 838
Query: 386 AQMKDLISNMPDEEFQSHKEALSAQRLEKPKKLSGLSSRFWLEITTQQYNFDRANIEVAY 445
M+ I +M +E FQ H +AL+ +RL+KPKKLS S+++W EI +QQYNFDR N EVAY
Sbjct: 839 ITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNTEVAY 898
Query: 446 LKSVTKENVLKFY 458
LK++TKE+++KFY
Sbjct: 899 LKTLTKEDIIKFY 911
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 12 ACKARVNNIVKSEFDKREYRGLELQNGMK 40
A K N+I KS DKREYRGLEL NG+K
Sbjct: 17 AIKRIGNHITKSPEDKREYRGLELANGIK 45
>pdb|3QZ2|A Chain A, The Structure Of Cysteine-Free Human Insulin Degrading
Enzyme
pdb|3QZ2|B Chain B, The Structure Of Cysteine-Free Human Insulin Degrading
Enzyme
pdb|4DTT|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme (ide)
In Complex With Compund 41367
pdb|4DTT|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme (ide)
In Complex With Compund 41367
Length = 990
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/433 (49%), Positives = 308/433 (71%), Gaps = 15/433 (3%)
Query: 39 MKKWTN---------PSPNEFIATDFSLLPSDPDISPHPTILYNSPLIRAWHKQDDEYRV 89
+KKW N P+ NEFI T+F +LP + + +P+P ++ ++ + + W KQDD++ +
Sbjct: 481 IKKWQNADLNGKFKLPTKNEFIPTNFEILPLEKEATPYPALIKDTAMSKLWFKQDDKFFL 540
Query: 90 PKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLSNTKYGMML 149
PK N +FEF SP+AY+DP +NM +L++ L KD+LNEY+Y A+LAGL++DL NT YGM L
Sbjct: 541 PKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYL 600
Query: 150 GISGYSHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPYQHAIYSIS 209
+ GY+ KQ +LL K+++K+A F ID KR+EIIKE Y R L NF AEQP+QHA+Y +
Sbjct: 601 SVKGYNDKQPILLKKIIEKMATFE--IDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLR 658
Query: 210 LCLFERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKMLEE 269
L + E AW+K EL E+LD +T +L F LLS++ IEAL+HGN KQ L I++M+E+
Sbjct: 659 LLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVED 718
Query: 270 KLQTKLKAKPLLPSQLLRFREIKIPEKSNLVYETQNAVHKSSCIEAYYQCGVQELRDNVL 329
L KPLLPSQL+R+RE+++P++ VY+ +N VH +S IE YYQ +Q +N+
Sbjct: 719 TLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNSGIEIYYQTDMQSTSENMF 778
Query: 330 LELFYPIPDEHT----HYQEQLGYIVVSGIRKSSGVQGLRIIVQSDKHPLFVDSRIEAFL 385
LELF I E +EQLGYIV SG R+++G+QGLR I+QS+K P +++SR+EAFL
Sbjct: 779 LELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVEAFL 838
Query: 386 AQMKDLISNMPDEEFQSHKEALSAQRLEKPKKLSGLSSRFWLEITTQQYNFDRANIEVAY 445
M+ I +M +E FQ H +AL+ +RL+KPKKLS S+++W EI +QQYNFDR N EVAY
Sbjct: 839 ITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNTEVAY 898
Query: 446 LKSVTKENVLKFY 458
LK++TKE+++KFY
Sbjct: 899 LKTLTKEDIIKFY 911
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 12 ACKARVNNIVKSEFDKREYRGLELQNGMK 40
A K N+I KS DKREYRGLEL NG+K
Sbjct: 17 AIKRIGNHITKSPEDKREYRGLELANGIK 45
>pdb|3HGZ|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|3HGZ|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
Length = 969
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/433 (49%), Positives = 308/433 (71%), Gaps = 15/433 (3%)
Query: 39 MKKWTN---------PSPNEFIATDFSLLPSDPDISPHPTILYNSPLIRAWHKQDDEYRV 89
+KKW N P+ NEFI T+F +LP + + +P+P ++ ++ + + W KQDD++ +
Sbjct: 468 IKKWQNADLNGKFKLPTKNEFIPTNFEILPLEKEATPYPALIKDTAMSKLWFKQDDKFFL 527
Query: 90 PKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLSNTKYGMML 149
PK N +FEF SP+AY+DP +NM +L++ L KD+LNEY+Y A+LAGL++DL NT YGM L
Sbjct: 528 PKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYL 587
Query: 150 GISGYSHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPYQHAIYSIS 209
+ GY+ KQ +LL K+++K+A F ID KR+EIIKE Y R L NF AEQP+QHA+Y +
Sbjct: 588 SVKGYNDKQPILLKKIIEKMATFE--IDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLR 645
Query: 210 LCLFERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKMLEE 269
L + E AW+K EL E+LD +T +L F LLS++ IEAL+HGN KQ L I++M+E+
Sbjct: 646 LLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVED 705
Query: 270 KLQTKLKAKPLLPSQLLRFREIKIPEKSNLVYETQNAVHKSSCIEAYYQCGVQELRDNVL 329
L KPLLPSQL+R+RE+++P++ VY+ +N VH +S IE YYQ +Q +N+
Sbjct: 706 TLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNSGIEIYYQTDMQSTSENMF 765
Query: 330 LELFYPIPDEHT----HYQEQLGYIVVSGIRKSSGVQGLRIIVQSDKHPLFVDSRIEAFL 385
LELF I E +EQLGYIV SG R+++G+QGLR I+QS+K P +++SR+EAFL
Sbjct: 766 LELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVEAFL 825
Query: 386 AQMKDLISNMPDEEFQSHKEALSAQRLEKPKKLSGLSSRFWLEITTQQYNFDRANIEVAY 445
M+ I +M +E FQ H +AL+ +RL+KPKKLS S+++W EI +QQYNFDR N EVAY
Sbjct: 826 ITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNTEVAY 885
Query: 446 LKSVTKENVLKFY 458
LK++TKE+++KFY
Sbjct: 886 LKTLTKEDIIKFY 898
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 12 ACKARVNNIVKSEFDKREYRGLELQNGMK 40
A K N+I KS DKREYRGLEL NG+K
Sbjct: 4 AIKRIGNHITKSPEDKREYRGLELANGIK 32
>pdb|3E4A|A Chain A, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution
pdb|3E4A|B Chain B, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution
pdb|2WK3|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-42)
pdb|2WK3|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-42)
Length = 1019
Score = 444 bits (1143), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/433 (49%), Positives = 308/433 (71%), Gaps = 15/433 (3%)
Query: 39 MKKWTN---------PSPNEFIATDFSLLPSDPDISPHPTILYNSPLIRAWHKQDDEYRV 89
+KKW N P+ NEFI T+F +LP + + +P+P ++ ++ + + W KQDD++ +
Sbjct: 510 IKKWQNADLNGKFKLPTKNEFIPTNFEILPLEKEATPYPALIKDTAMSKLWFKQDDKFFL 569
Query: 90 PKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLSNTKYGMML 149
PK N +FEF SP+AY+DP +NM +L++ L KD+LNEY+Y A+LAGL++DL NT YGM L
Sbjct: 570 PKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYL 629
Query: 150 GISGYSHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPYQHAIYSIS 209
+ GY+ KQ +LL K+++K+A F ID KR+EIIKE Y R L NF AEQP+QHA+Y +
Sbjct: 630 SVKGYNDKQPILLKKIIEKMATFE--IDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLR 687
Query: 210 LCLFERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKMLEE 269
L + E AW+K EL E+LD +T +L F LLS++ IEAL+HGN KQ L I++M+E+
Sbjct: 688 LLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVED 747
Query: 270 KLQTKLKAKPLLPSQLLRFREIKIPEKSNLVYETQNAVHKSSCIEAYYQCGVQELRDNVL 329
L KPLLPSQL+R+RE+++P++ VY+ +N VH +S IE YYQ +Q +N+
Sbjct: 748 TLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNSGIEIYYQTDMQSTSENMF 807
Query: 330 LELFYPIPDEHT----HYQEQLGYIVVSGIRKSSGVQGLRIIVQSDKHPLFVDSRIEAFL 385
LELF I E +EQLGYIV SG R+++G+QGLR I+QS+K P +++SR+EAFL
Sbjct: 808 LELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVEAFL 867
Query: 386 AQMKDLISNMPDEEFQSHKEALSAQRLEKPKKLSGLSSRFWLEITTQQYNFDRANIEVAY 445
M+ I +M +E FQ H +AL+ +RL+KPKKLS S+++W EI +QQYNFDR N EVAY
Sbjct: 868 ITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNTEVAY 927
Query: 446 LKSVTKENVLKFY 458
LK++TKE+++KFY
Sbjct: 928 LKTLTKEDIIKFY 940
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 12 ACKARVNNIVKSEFDKREYRGLELQNGMK 40
A K N+I KS DKREYRGLEL NG+K
Sbjct: 46 AIKRIGNHITKSPEDKREYRGLELANGIK 74
>pdb|3E4Z|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Insulin-Like Growth Factor Ii
pdb|3E4Z|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Insulin-Like Growth Factor Ii
Length = 990
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/433 (49%), Positives = 308/433 (71%), Gaps = 15/433 (3%)
Query: 39 MKKWTN---------PSPNEFIATDFSLLPSDPDISPHPTILYNSPLIRAWHKQDDEYRV 89
+KKW N P+ NEFI T+F +LP + + +P+P ++ ++ + + W KQDD++ +
Sbjct: 481 IKKWQNADLNGKFKLPTKNEFIPTNFEILPLEKEATPYPALIKDTAMSKLWFKQDDKFFL 540
Query: 90 PKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLSNTKYGMML 149
PK N +FEF SP+AY+DP +NM +L++ L KD+LNEY+Y A+LAGL++DL NT YGM L
Sbjct: 541 PKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYL 600
Query: 150 GISGYSHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPYQHAIYSIS 209
+ GY+ KQ +LL K+++K+A F ID KR+EIIKE Y R L NF AEQP+QHA+Y +
Sbjct: 601 SVKGYNDKQPILLKKIIEKMATFE--IDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLR 658
Query: 210 LCLFERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKMLEE 269
L + E AW+K EL E+LD +T +L F LLS++ IEAL+HGN KQ L I++M+E+
Sbjct: 659 LLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVED 718
Query: 270 KLQTKLKAKPLLPSQLLRFREIKIPEKSNLVYETQNAVHKSSCIEAYYQCGVQELRDNVL 329
L KPLLPSQL+R+RE+++P++ VY+ +N VH +S IE YYQ +Q +N+
Sbjct: 719 TLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNSGIEIYYQTDMQSTSENMF 778
Query: 330 LELFYPIPDEHT----HYQEQLGYIVVSGIRKSSGVQGLRIIVQSDKHPLFVDSRIEAFL 385
LELF I E +EQLGYIV SG R+++G+QGLR I+QS+K P +++SR+EAFL
Sbjct: 779 LELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVEAFL 838
Query: 386 AQMKDLISNMPDEEFQSHKEALSAQRLEKPKKLSGLSSRFWLEITTQQYNFDRANIEVAY 445
M+ I +M +E FQ H +AL+ +RL+KPKKLS S++++ EI +QQYNFDR N EVAY
Sbjct: 839 ITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYYGEIISQQYNFDRDNTEVAY 898
Query: 446 LKSVTKENVLKFY 458
LK++TKE+++KFY
Sbjct: 899 LKTLTKEDIIKFY 911
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 12 ACKARVNNIVKSEFDKREYRGLELQNGMK 40
A K N+I KS DKREYRGLEL NG+K
Sbjct: 17 AIKRIGNHITKSPEDKREYRGLELANGIK 45
>pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-40)
pdb|2G47|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-40)
pdb|2G48|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|2G48|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|2G49|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Glucagon
pdb|2G49|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Glucagon
pdb|2G54|A Chain A, Crystal Structure Of Zn-Bound Human Insulin-Degrading
Enzyme In Complex With Insulin B Chain
pdb|2G54|B Chain B, Crystal Structure Of Zn-Bound Human Insulin-Degrading
Enzyme In Complex With Insulin B Chain
pdb|2G56|A Chain A, Crystal Structure Of Human Insulin-degrading Enzyme In
Complex With Insulin B Chain
pdb|2G56|B Chain B, Crystal Structure Of Human Insulin-degrading Enzyme In
Complex With Insulin B Chain
pdb|2JBU|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme
Complexed With Co-Purified Peptides.
pdb|2JBU|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme
Complexed With Co-Purified Peptides.
pdb|3E50|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Transforming Growth Factor-Alpha
pdb|3E50|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Transforming Growth Factor-Alpha
Length = 990
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/433 (49%), Positives = 304/433 (70%), Gaps = 15/433 (3%)
Query: 39 MKKWTN---------PSPNEFIATDFSLLPSDPDISPHPTILYNSPLIRAWHKQDDEYRV 89
+KKW N P+ NEFI T+F +LP + + +P+P ++ ++ + + W KQDD++ +
Sbjct: 481 IKKWQNADLNGKFKLPTKNEFIPTNFEILPLEKEATPYPALIKDTAMSKLWFKQDDKFFL 540
Query: 90 PKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLSNTKYGMML 149
PK +FEF SP+AY+DP NM +L++ L KD+LNEY+Y A+LAGL++DL NT YGM L
Sbjct: 541 PKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYL 600
Query: 150 GISGYSHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPYQHAIYSIS 209
+ GY+ KQ +LL K+++K+A F ID KR+EIIKE Y R L NF AEQP+QHA+Y +
Sbjct: 601 SVKGYNDKQPILLKKIIEKMATFE--IDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLR 658
Query: 210 LCLFERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKMLEE 269
L + E AW+K EL E+LD +T +L F LLS++ IEAL+HGN KQ L I++M+E+
Sbjct: 659 LLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVED 718
Query: 270 KLQTKLKAKPLLPSQLLRFREIKIPEKSNLVYETQNAVHKSSCIEAYYQCGVQELRDNVL 329
L KPLLPSQL+R+RE+++P++ VY+ +N VH + IE YYQ +Q +N+
Sbjct: 719 TLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNCGIEIYYQTDMQSTSENMF 778
Query: 330 LELFYPIPDEHT----HYQEQLGYIVVSGIRKSSGVQGLRIIVQSDKHPLFVDSRIEAFL 385
LELF I E +EQLGYIV SG R+++G+QGLR I+QS+K P +++SR+EAFL
Sbjct: 779 LELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVEAFL 838
Query: 386 AQMKDLISNMPDEEFQSHKEALSAQRLEKPKKLSGLSSRFWLEITTQQYNFDRANIEVAY 445
M+ I +M +E FQ H +AL+ +RL+KPKKLS +++W EI +QQYNFDR N EVAY
Sbjct: 839 ITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNFDRDNTEVAY 898
Query: 446 LKSVTKENVLKFY 458
LK++TKE+++KFY
Sbjct: 899 LKTLTKEDIIKFY 911
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 12 ACKARVNNIVKSEFDKREYRGLELQNGMK 40
A K N+I KS DKREYRGLEL NG+K
Sbjct: 17 AIKRIGNHITKSPEDKREYRGLELANGIK 45
>pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation
pdb|2JG4|B Chain B, Substrate-Free Ide Structure In Its Closed Conformation
Length = 990
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/433 (48%), Positives = 304/433 (70%), Gaps = 15/433 (3%)
Query: 39 MKKWTN---------PSPNEFIATDFSLLPSDPDISPHPTILYNSPLIRAWHKQDDEYRV 89
+KKW N P+ NEFI T+F +LP + + +P+P ++ ++ + + W KQDD++ +
Sbjct: 481 IKKWQNADLNGKFKLPTKNEFIPTNFEILPLEKEATPYPALIKDTAMSKLWFKQDDKFFL 540
Query: 90 PKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLSNTKYGMML 149
PK +FEF SP+AY+DP NM +L++ L KD+LNEY+Y A+LAGL++DL NT YGM L
Sbjct: 541 PKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYL 600
Query: 150 GISGYSHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPYQHAIYSIS 209
+ GY+ KQ +LL K+++K+A F ID KR+EIIKE Y R L NF AEQP+QHA+Y +
Sbjct: 601 SVKGYNDKQPILLKKIIEKMATFE--IDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLR 658
Query: 210 LCLFERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKMLEE 269
L + E AW+K EL E+LD +T +L F LLS++ IEAL+HGN KQ L I++M+E+
Sbjct: 659 LLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVED 718
Query: 270 KLQTKLKAKPLLPSQLLRFREIKIPEKSNLVYETQNAVHKSSCIEAYYQCGVQELRDNVL 329
L KPLLPSQL+R+RE+++P++ VY+ +N VH + IE YYQ +Q +N+
Sbjct: 719 TLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNCGIEIYYQTDMQSTSENMF 778
Query: 330 LELFYPIPDEHT----HYQEQLGYIVVSGIRKSSGVQGLRIIVQSDKHPLFVDSRIEAFL 385
LELF I E +EQLG+IV SG R+++G+QGLR I+QS+K P +++SR+EAFL
Sbjct: 779 LELFCQIISEPCFNTLRTKEQLGFIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVEAFL 838
Query: 386 AQMKDLISNMPDEEFQSHKEALSAQRLEKPKKLSGLSSRFWLEITTQQYNFDRANIEVAY 445
M+ I +M +E FQ H +AL+ +RL+KPKKLS +++W EI +QQYNFDR N EVAY
Sbjct: 839 ITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNFDRDNTEVAY 898
Query: 446 LKSVTKENVLKFY 458
LK++TKE+++KFY
Sbjct: 899 LKTLTKEDIIKFY 911
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 12 ACKARVNNIVKSEFDKREYRGLELQNGMK 40
A K N+I KS DKREYRGLEL NG+K
Sbjct: 17 AIKRIGNHITKSPEDKREYRGLELANGIK 45
>pdb|3CWW|A Chain A, Crystal Structure Of Ide-Bradykinin Complex
pdb|3CWW|B Chain B, Crystal Structure Of Ide-Bradykinin Complex
Length = 990
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/433 (48%), Positives = 301/433 (69%), Gaps = 15/433 (3%)
Query: 39 MKKWTN---------PSPNEFIATDFSLLPSDPDISPHPTILYNSPLIRAWHKQDDEYRV 89
+ KW N P+ NEFI T+F +LP + +P+P ++ ++ + + W KQDD++ +
Sbjct: 481 IAKWQNAALNGKFKLPTKNEFIPTNFEILPLEAAATPYPALIKDTAMSKLWFKQDDKFFL 540
Query: 90 PKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLSNTKYGMML 149
PK N +FEF SP+AY+DP +NM +L++ L KD+LNEY+Y A+LAGL++DL NT YGM L
Sbjct: 541 PKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYL 600
Query: 150 GISGYSHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPYQHAIYSIS 209
+ GY+ KQ +LL K+++K+A F ID R+EIIKE Y R L NF AEQP+QHA+Y +
Sbjct: 601 SVKGYNDKQPILLKKIIEKMATFE--IDEARFEIIKEAYMRSLNNFRAEQPHQHAMYYLR 658
Query: 210 LCLFERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKMLEE 269
L + E AW+K EL E+L +T +L F LLS++ IEAL+HGN KQ L I++M+E+
Sbjct: 659 LLMTEVAWTKDELKEALADVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVED 718
Query: 270 KLQTKLKAKPLLPSQLLRFREIKIPEKSNLVYETQNAVHKSSCIEAYYQCGVQELRDNVL 329
L KPLLPSQL +RE+++P++ VY+ +N VH +S IE YYQ +Q +N+
Sbjct: 719 TLIEHAHTKPLLPSQLAAYREVQLPDRGWFVYQQRNEVHNNSGIEIYYQTDMQSTSENMF 778
Query: 330 LELFYPIPDEHT----HYQEQLGYIVVSGIRKSSGVQGLRIIVQSDKHPLFVDSRIEAFL 385
LELF I E +EQLGYIV SG R+++G+QGLR I+QS+K P +++SR+EAFL
Sbjct: 779 LELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVEAFL 838
Query: 386 AQMKDLISNMPDEEFQSHKEALSAQRLEKPKKLSGLSSRFWLEITTQQYNFDRANIEVAY 445
M+ I +M +E FQ H +AL+ +RL+KPKKLS S+++W EI +QQYNFDR N EVAY
Sbjct: 839 ITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNTEVAY 898
Query: 446 LKSVTKENVLKFY 458
LK++TK +++KFY
Sbjct: 899 LKTLTKADIIKFY 911
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 12 ACKARVNNIVKSEFDKREYRGLELQNGMK 40
A K N+I KS DKREYRGLEL NG+K
Sbjct: 17 AIKRIGNHITKSPEDKREYRGLELANGIK 45
>pdb|3P7O|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) E111f Mutant With
Two Bound Peptides
Length = 1019
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/436 (47%), Positives = 305/436 (69%), Gaps = 15/436 (3%)
Query: 36 QNGMKKWTN---------PSPNEFIATDFSLLPSDPDISPHPTILYNSPLIRAWHKQDDE 86
++ ++KW N P+ NEFI T+F +L + D +P+P ++ ++ + + W KQDD+
Sbjct: 507 EDVIQKWQNADLNGKFKLPTKNEFIPTNFEILALEKDATPYPALIKDTAMSKLWFKQDDK 566
Query: 87 YRVPKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLSNTKYG 146
+ +PK +FEF SP+AY+DP NM +L++ L KD+LNEY+Y A+LAGL++DL NT YG
Sbjct: 567 FFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYG 626
Query: 147 MMLGISGYSHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPYQHAIY 206
M L + GY+ KQ +LL K+ +K+A F ID KR+EIIKE Y R L NF AEQP+QHA+Y
Sbjct: 627 MYLSVKGYNDKQPILLKKITEKMATFE--IDKKRFEIIKEAYMRSLNNFRAEQPHQHAMY 684
Query: 207 SISLCLFERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKM 266
+ L + E AW+K EL E+LD +T +L F LLS++ IEAL+HGN KQ L +++M
Sbjct: 685 YLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGVMQM 744
Query: 267 LEEKLQTKLKAKPLLPSQLLRFREIKIPEKSNLVYETQNAVHKSSCIEAYYQCGVQELRD 326
+E+ L KPLLPSQL+R+RE+++P++ VY+ +N VH + IE YYQ +Q +
Sbjct: 745 VEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQRRNEVHNNCGIEIYYQTDMQSTSE 804
Query: 327 NVLLELFYPIPDEHT----HYQEQLGYIVVSGIRKSSGVQGLRIIVQSDKHPLFVDSRIE 382
N+ LELF I E +EQLGYIV SG R+++G+QGLR I+QS+K P +++SR+E
Sbjct: 805 NMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVE 864
Query: 383 AFLAQMKDLISNMPDEEFQSHKEALSAQRLEKPKKLSGLSSRFWLEITTQQYNFDRANIE 442
AFL M+ I +M +E FQ H +AL+ +RL+KPKKLS +++W EI +QQYN+DR NIE
Sbjct: 865 AFLITMEKAIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNYDRDNIE 924
Query: 443 VAYLKSVTKENVLKFY 458
VAYLK+++K++++KFY
Sbjct: 925 VAYLKTLSKDDIIKFY 940
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 20/23 (86%)
Query: 18 NNIVKSEFDKREYRGLELQNGMK 40
++IVKS DKREYRGLEL NG+K
Sbjct: 52 DHIVKSPEDKREYRGLELANGIK 74
>pdb|3P7L|A Chain A, Rat Insulin Degrading Enzyme (Insulysin)
Length = 978
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/436 (47%), Positives = 305/436 (69%), Gaps = 15/436 (3%)
Query: 36 QNGMKKWTN---------PSPNEFIATDFSLLPSDPDISPHPTILYNSPLIRAWHKQDDE 86
++ ++KW N P+ NEFI T+F +L + D +P+P ++ ++ + + W KQDD+
Sbjct: 466 EDVIQKWQNADLNGKFKLPTKNEFIPTNFEILALEKDATPYPALIKDTAMSKLWFKQDDK 525
Query: 87 YRVPKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLSNTKYG 146
+ +PK +FEF SP+AY+DP NM +L++ L KD+LNEY+Y A+LAGL++DL NT YG
Sbjct: 526 FFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYG 585
Query: 147 MMLGISGYSHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPYQHAIY 206
M L + GY+ KQ +LL K+ +K+A F ID KR+EIIKE Y R L NF AEQP+QHA+Y
Sbjct: 586 MYLSVKGYNDKQPILLKKITEKMATFE--IDKKRFEIIKEAYMRSLNNFRAEQPHQHAMY 643
Query: 207 SISLCLFERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKM 266
+ L + E AW+K EL E+LD +T +L F LLS++ IEAL+HGN KQ L +++M
Sbjct: 644 YLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGVMQM 703
Query: 267 LEEKLQTKLKAKPLLPSQLLRFREIKIPEKSNLVYETQNAVHKSSCIEAYYQCGVQELRD 326
+E+ L KPLLPSQL+R+RE+++P++ VY+ +N VH + IE YYQ +Q +
Sbjct: 704 VEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQRRNEVHNNCGIEIYYQTDMQSTSE 763
Query: 327 NVLLELFYPIPDEHT----HYQEQLGYIVVSGIRKSSGVQGLRIIVQSDKHPLFVDSRIE 382
N+ LELF I E +EQLGYIV SG R+++G+QGLR I+QS+K P +++SR+E
Sbjct: 764 NMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVE 823
Query: 383 AFLAQMKDLISNMPDEEFQSHKEALSAQRLEKPKKLSGLSSRFWLEITTQQYNFDRANIE 442
AFL M+ I +M +E FQ H +AL+ +RL+KPKKLS +++W EI +QQYN+DR NIE
Sbjct: 824 AFLITMEKAIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNYDRDNIE 883
Query: 443 VAYLKSVTKENVLKFY 458
VAYLK+++K++++KFY
Sbjct: 884 VAYLKTLSKDDIIKFY 899
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 20/23 (86%)
Query: 18 NNIVKSEFDKREYRGLELQNGMK 40
++IVKS DKREYRGLEL NG+K
Sbjct: 11 DHIVKSPEDKREYRGLELANGIK 33
>pdb|3TUV|A Chain A, Crystal Structure Of Insulysin With Bound Atp
Length = 1019
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/436 (47%), Positives = 305/436 (69%), Gaps = 15/436 (3%)
Query: 36 QNGMKKWTN---------PSPNEFIATDFSLLPSDPDISPHPTILYNSPLIRAWHKQDDE 86
++ ++KW N P+ NEFI T+F +L + D +P+P ++ ++ + + W KQDD+
Sbjct: 507 EDVIQKWQNADLNGKFKLPTKNEFIPTNFEILALEKDATPYPALIKDTAMSKLWFKQDDK 566
Query: 87 YRVPKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLSNTKYG 146
+ +PK +FEF SP+AY+DP NM +L++ L KD+LNEY+Y A+LAGL++DL NT YG
Sbjct: 567 FFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYG 626
Query: 147 MMLGISGYSHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPYQHAIY 206
M L + GY+ KQ +LL K+ +K+A F ID KR+EIIKE Y R L NF AEQP+QHA+Y
Sbjct: 627 MYLSVKGYNDKQPILLKKITEKMATFE--IDKKRFEIIKEAYMRSLNNFRAEQPHQHAMY 684
Query: 207 SISLCLFERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKM 266
+ L + E AW+K EL E+LD +T +L F LLS++ IEAL+HGN KQ L +++M
Sbjct: 685 YLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGVMQM 744
Query: 267 LEEKLQTKLKAKPLLPSQLLRFREIKIPEKSNLVYETQNAVHKSSCIEAYYQCGVQELRD 326
+E+ L KPLLPSQL+R+RE+++P++ VY+ +N VH + IE YYQ +Q +
Sbjct: 745 VEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQRRNEVHNNCGIEIYYQTDMQSTSE 804
Query: 327 NVLLELFYPIPDEHT----HYQEQLGYIVVSGIRKSSGVQGLRIIVQSDKHPLFVDSRIE 382
N+ LELF I E +EQLGYIV SG R+++G+QGLR I+QS+K P +++SR+E
Sbjct: 805 NMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVE 864
Query: 383 AFLAQMKDLISNMPDEEFQSHKEALSAQRLEKPKKLSGLSSRFWLEITTQQYNFDRANIE 442
AFL M+ I +M +E FQ H +AL+ +RL+KPKKLS +++W EI +QQYN+DR NIE
Sbjct: 865 AFLITMEKAIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNYDRDNIE 924
Query: 443 VAYLKSVTKENVLKFY 458
VAYLK+++K++++KFY
Sbjct: 925 VAYLKTLSKDDIIKFY 940
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 20/23 (86%)
Query: 18 NNIVKSEFDKREYRGLELQNGMK 40
++IVKS DKREYRGLEL NG+K
Sbjct: 52 DHIVKSPEDKREYRGLELANGIK 74
>pdb|1Q2L|A Chain A, Crystal Structure Of Pitrilysin
Length = 939
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 185/421 (43%), Gaps = 19/421 (4%)
Query: 45 PSPNEFIATDFSLLPSDPDISPHPTILYNSPLIRAWHKQDDEYRV-PKLNASFEFISPYA 103
P N +I DFSL+ S+ HP ++ + +R + + PK + S +P A
Sbjct: 478 PELNPYIPDDFSLIKSEKKYD-HPELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKA 536
Query: 104 YLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLSNTKYGMMLGISGYSHKQSVLLS 163
M L L AL++ S A + G+++ +N G+M+ +GY+ + L
Sbjct: 537 MDSARNQVMFALNDYLAGLALDQLSNQASVGGISFS-TNANNGLMVNANGYTQRLPQLFQ 595
Query: 164 KVLDKLADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPYQHAIYSISLCLFERAWSKTELL 223
+L+ FS + E K Y + + + E + ++ AI + +S+ E
Sbjct: 596 ALLEGY--FSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERR 653
Query: 224 ESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKMLEEKLQTKLKAKPLLPS 283
+ L IT ++++ + L S E ++ GN + ++ + ++++L S
Sbjct: 654 KILPSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGAD-------GS 706
Query: 284 QLLRFREIKIPEKSNLVYETQNAVHKSSCIEAYYQCGVQELRDN----VLLELFYPIPDE 339
+ R +++ + +K ++++E S+ + G E + +L ++ P
Sbjct: 707 EWCRNKDVVVDKKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYN 766
Query: 340 HTHYQEQLGYIVVSGIRKSSGVQ-GLRIIVQS-DKHPLFVDSRIEAFLAQMKDLISNMPD 397
+EQLGY V + S G Q G+ ++QS DK P F+ R +AF + + M
Sbjct: 767 QLRTEEQLGYAVFA-FPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKP 825
Query: 398 EEFQSHKEALSAQRLEKPKKLSGLSSRFWLEITTQQYNFDRANIEVAYLKSVTKENVLKF 457
+EF ++A+ Q L+ P+ L +S+ + FD + VA +K +T + + F
Sbjct: 826 DEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADF 885
Query: 458 Y 458
+
Sbjct: 886 F 886
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 214 ERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKML 267
E + + ELL+ L + ++LVE D++SK+ E + GN +K + I +L
Sbjct: 182 EASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLL 235
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 214 ERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKML 267
E + + ELL+ L + ++LVE D++SK+ E + GN +K + I +L
Sbjct: 182 EASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLL 235
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 214 ERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKML 267
E + + ELL+ L + ++LVE D++SK+ E + GN +K + I +L
Sbjct: 182 EASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLL 235
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 214 ERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKML 267
E + + ELL+ L + ++LVE D++SK+ E + GN +K + I +L
Sbjct: 182 EASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLL 235
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 214 ERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKML 267
E + + ELL+ L + ++LVE D++SK+ E + GN +K + I +L
Sbjct: 182 EASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLL 235
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 214 ERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKML 267
E + + ELL+ L + ++LVE D++SK+ E + GN +K + I +L
Sbjct: 182 EASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLL 235
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 214 ERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKML 267
E + + ELL+ L + ++LVE D++SK+ E + GN +K + I +L
Sbjct: 184 EASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLL 237
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 214 ERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKML 267
E + + ELL+ L + ++LVE D++SK+ E + GN +K + I +L
Sbjct: 183 EASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLL 236
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 214 ERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKML 267
E + + ELL+ L + ++LVE D++SK+ E + GN +K + I +L
Sbjct: 183 EASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLL 236
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 214 ERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKML 267
E + + ELL+ L + ++LVE D++SK+ E + GN +K + I +L
Sbjct: 182 EASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLL 235
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 214 ERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKML 267
E + + ELL+ L + ++LVE D++SK+ E + GN +K + I +L
Sbjct: 183 EASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLL 236
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 214 ERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKML 267
+ + + ELL+ L + ++LVE D++SK+ E + GN +K + I +L
Sbjct: 183 QASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLL 236
>pdb|2CQO|A Chain A, Solution Structure Of The S1 Rna Binding Domain Of Human
Hypothetical Protein Flj11067
Length = 119
Score = 28.5 bits (62), Expect = 8.6, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 403 HKEALSAQRLEKPKKLSGLSSRFWLEITTQQYNFDRANIEVAYLKSVTKENVLKFYDKRN 462
H+ +S+ R++KP ++ + + W+++ ++ DR I+V+ V + K D N
Sbjct: 52 HRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDR--IKVSLSMKVVNQGTGKDLDPNN 109
>pdb|2XZM|D Chain D, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
pdb|2XZN|D Chain D, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
Length = 181
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 19/118 (16%)
Query: 191 GLKNFEAEQPYQHAIYSISLCLFERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEAL 250
GLKN + ++ + + L + + ELL +LD +L E S LL +MF L
Sbjct: 35 GLKN-------KREVWRVQMILAKFRKAARELL-TLDPKDPRRLFEGS-ALLRRMFKYGL 85
Query: 251 IHGNANK---QVGLSIVKMLEEKLQTKLKAKPLLPS-----QLLRFREIKIPEKSNLV 300
+ K +GL+I K++E +LQT++ L S L+R R IK+ + NLV
Sbjct: 86 LSEQERKLDYVLGLTIHKLMERRLQTRVFKLNLANSIHHSRVLIRQRHIKVGK--NLV 141
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,829,045
Number of Sequences: 62578
Number of extensions: 570212
Number of successful extensions: 1558
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1500
Number of HSP's gapped (non-prelim): 38
length of query: 469
length of database: 14,973,337
effective HSP length: 102
effective length of query: 367
effective length of database: 8,590,381
effective search space: 3152669827
effective search space used: 3152669827
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)