RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy8002
(469 letters)
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading
enzyme, criptidase, kinins, hydrolase; 1.96A {Homo
sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A
3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A
2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ...
Length = 990
Score = 353 bits (907), Expect = e-112
Identities = 209/443 (47%), Positives = 301/443 (67%), Gaps = 6/443 (1%)
Query: 22 KSEFDKREYRGLELQNGMKKWTNPSPNEFIATDFSLLPSDPDISPHPTILYNSPLIRAWH 81
+ + K+ P+ NEFI T+F +LP + +P+P ++ ++ + + W
Sbjct: 473 QEAIPDAVIAKWQNAALNGKFKLPTKNEFIPTNFEILPLEAAATPYPALIKDTAMSKLWF 532
Query: 82 KQDDEYRVPKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLS 141
KQDD++ +PK N +FEF SP+AY+DP +NM +L++ L KD+LNEY+Y A+LAGL++DL
Sbjct: 533 KQDDKFFLPKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQ 592
Query: 142 NTKYGMMLGISGYSHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPY 201
NT YGM L + GY+ KQ +LL K+++K+A F ID R+EIIKE Y R L NF AEQP+
Sbjct: 593 NTIYGMYLSVKGYNDKQPILLKKIIEKMATF--EIDEARFEIIKEAYMRSLNNFRAEQPH 650
Query: 202 QHAIYSISLCLFERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGL 261
QHA+Y + L + E AW+K EL E+L +T +L F LLS++ IEAL+HGN KQ L
Sbjct: 651 QHAMYYLRLLMTEVAWTKDELKEALADVTLPRLKAFIPQLLSRLHIEALLHGNITKQAAL 710
Query: 262 SIVKMLEEKLQTKLKAKPLLPSQLLRFREIKIPEKSNLVYETQNAVHKSSCIEAYYQCGV 321
I++M+E+ L KPLLPSQL +RE+++P++ VY+ +N VH +S IE YYQ +
Sbjct: 711 GIMQMVEDTLIEHAHTKPLLPSQLAAYREVQLPDRGWFVYQQRNEVHNNSGIEIYYQTDM 770
Query: 322 QELRDNVLLELFYPIPDEHTHYQ----EQLGYIVVSGIRKSSGVQGLRIIVQSDKHPLFV 377
Q +N+ LELF I E EQLGYIV SG R+++G+QGLR I+QS+K P ++
Sbjct: 771 QSTSENMFLELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPHYL 830
Query: 378 DSRIEAFLAQMKDLISNMPDEEFQSHKEALSAQRLEKPKKLSGLSSRFWLEITTQQYNFD 437
+SR+EAFL M+ I +M +E FQ H +AL+ +RL+KPKKLS S+++W EI +QQYNFD
Sbjct: 831 ESRVEAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFD 890
Query: 438 RANIEVAYLKSVTKENVLKFYDK 460
R N EVAYLK++TK +++KFY +
Sbjct: 891 RDNTEVAYLKTLTKADIIKFYKE 913
Score = 36.0 bits (82), Expect = 0.033
Identities = 17/24 (70%), Positives = 19/24 (79%)
Query: 17 VNNIVKSEFDKREYRGLELQNGMK 40
N+I KS DKREYRGLEL NG+K
Sbjct: 22 GNHITKSPEDKREYRGLELANGIK 45
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP:
d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
Length = 939
Score = 320 bits (822), Expect = e-100
Identities = 87/443 (19%), Positives = 184/443 (41%), Gaps = 17/443 (3%)
Query: 24 EFDKREYRGLELQNGMKKWTNPSPNEFIATDFSLLPSDPDISPHPTILYNSPLIRAWHKQ 83
+ + + + + + P N +I DFSL+ S+ HP ++ + +R +
Sbjct: 457 KISAQTFADWQKKAADIALSLPELNPYIPDDFSLIKSEKK-YDHPELIVDESNLRVVYAP 515
Query: 84 DDEYRV-PKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLSN 142
+ PK + S +P A M L L AL++ S A + G+++ +
Sbjct: 516 SRYFASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTN- 574
Query: 143 TKYGMMLGISGYSHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPYQ 202
G+M+ +GY+ + L +L+ + + E K Y + + + E + ++
Sbjct: 575 ANNGLMVNANGYTQRLPQLFQALLEGYFSY--TATEDQLEQAKSWYNQMMDSAEKGKAFE 632
Query: 203 HAIYSISLCLFERAWSKTELLESLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLS 262
AI + +S+ E + L IT ++++ + L S E ++ GN + +
Sbjct: 633 QAIMPAQMLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATT 692
Query: 263 IVKMLEEKLQTKLKAKPLLPSQLLRFREIKIPEKSNLVYETQNAVHKSSCIEAYYQCGVQ 322
+ + ++++L S+ R +++ + +K ++++E S+ + G
Sbjct: 693 LARDVQKQLGAD-------GSEWCRNKDVVVDKKQSVIFEKAGNSTDSALAAVFVPTGYD 745
Query: 323 ELRDNVLLELFYPIPDEHTHYQ----EQLGYIVVSGIRKSSGVQGLRIIVQSDKH-PLFV 377
E + L I + Q EQLGY V + G+ ++QS+ P F+
Sbjct: 746 EYTSSAYSSLLGQIVQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFL 805
Query: 378 DSRIEAFLAQMKDLISNMPDEEFQSHKEALSAQRLEKPKKLSGLSSRFWLEITTQQYNFD 437
R +AF + + M +EF ++A+ Q L+ P+ L +S+ + FD
Sbjct: 806 WERYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFD 865
Query: 438 RANIEVAYLKSVTKENVLKFYDK 460
+ VA +K +T + + F+ +
Sbjct: 866 SRDKIVAQIKLLTPQKLADFFHQ 888
Score = 36.3 bits (83), Expect = 0.023
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 18 NNIVKSEFDKREYRGLELQNGMKKWTNPSPNE 49
I KS+ D R+Y+ + L NGM P
Sbjct: 9 ETIRKSDKDNRQYQAIRLDNGMVVLLVSDPQA 40
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 57.4 bits (138), Expect = 7e-09
Identities = 61/423 (14%), Positives = 116/423 (27%), Gaps = 147/423 (34%)
Query: 34 ELQNGMKKWT--NPSPNEFIATDFSLLPSDPDISPHPTILYNSPL-IRAWHKQ-----DD 85
EL+ + + + I L + ++ L I W + D
Sbjct: 172 ELR---DLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDK 228
Query: 86 EY--RVPKLNASFEFI-----------------SPYAYLDPECTNMTH-------LFISL 119
+Y +P S I +P H + I+
Sbjct: 229 DYLLSIP---ISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAE 285
Query: 120 FK--DALNEYSYDAKLAGLAW--------------DLSNTKYGM---------MLGISGY 154
++ A + L + S + + ML IS
Sbjct: 286 TDSWESFFVSVRKA-ITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNL 344
Query: 155 SHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPYQHAI--YSISLCL 212
+ +Q + + +N P +Q L N + SL
Sbjct: 345 TQEQ-------VQDYVNKTNSHLPAG-----KQVEISLVN----GAKNLVVSGPPQSLYG 388
Query: 213 FERAWSKTELLESLDGITR----EKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKMLE 268
K + LD +R E+ ++FS+ L + + H S +L
Sbjct: 389 LNLTLRKAKAPSGLD-QSRIPFSERKLKFSNRFLP---VASPFH---------S--HLLV 433
Query: 269 EKLQTKLKAKPLLPSQLLR----FR--EIKIPEKSNLVYETQNAVHKSSCIEAYYQCGVQ 322
A L+ L++ F +I+IP VY+T + ++
Sbjct: 434 P-------ASDLINKDLVKNNVSFNAKDIQIP-----VYDTFDGSD------------LR 469
Query: 323 ELRDNVLLELFYPIPDEHTHYQEQLG----YIVVSGIRKSSGV----------QGLRIIV 368
L ++ + I ++ +I+ G +SG+ G+R+IV
Sbjct: 470 VLSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTGVRVIV 529
Query: 369 QSD 371
Sbjct: 530 AGT 532
Score = 39.3 bits (91), Expect = 0.003
Identities = 51/329 (15%), Positives = 103/329 (31%), Gaps = 134/329 (40%)
Query: 129 YDA-KLAGLAWDLSNTKYGMMLGISGYSHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQ 187
Y K A W+ ++ + G S +L V++ + + H ++ + I+E
Sbjct: 1636 YKTSKAAQDVWNRADNHFKDTYGFS--------ILDIVINNPVNLTIHFGGEKGKRIREN 1687
Query: 188 Y----YRGLKN--------------------FEAE----------QPYQHAIYSISLCLF 213
Y + + + F +E QP A+ + F
Sbjct: 1688 YSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQP---ALTLMEKAAF 1744
Query: 214 ERAWSKTELLE-------SLDGITREKLVEFSHDLLSKMFIEALIHGNANKQVGLSIVKM 266
E SK + SL G E++ AL A+ +S
Sbjct: 1745 EDLKSKGLIPADATFAGHSL-G-------EYA----------ALASL-AD---VMS---- 1778
Query: 267 LEEKLQTKLKAKPLLPSQLLRFR----EIKIPE----KSN--LVYETQNAVHKSSCIEAY 316
+E + +++ +R ++ +P +SN ++ V S EA
Sbjct: 1779 IESLV------------EVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEAL 1826
Query: 317 YQCGVQEL--RDNVLLELF-YPIPDEHTHYQEQLGYIVVSG----------IRKSSGVQG 363
V+ + R L+E+ Y + ++ Q V +G + +Q
Sbjct: 1827 QYV-VERVGKRTGWLVEIVNYNVENQ----Q-----YVAAGDLRALDTVTNVLNFIKLQK 1876
Query: 364 LRIIVQSDKHPLFVDSRIEAFLAQMKDLI 392
+ II L +E +++ +
Sbjct: 1877 IDII------ELQKSLSLE----EVEGHL 1895
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 51.8 bits (123), Expect = 4e-07
Identities = 63/424 (14%), Positives = 136/424 (32%), Gaps = 107/424 (25%)
Query: 102 YAYLDPECTNMTHLF---ISLFKDALNEYSYDAK-----LAGLAWDLSNTKYGMMLGISG 153
+ ++D E + + +S+F+DA + ++D K + LS + ++
Sbjct: 4 HHHMDFETGEHQYQYKDILSVFEDAFVD-NFDCKDVQDMPKSI---LSKEEIDHIIMSKD 59
Query: 154 YSHKQSVLLSKVLDK----LADFSNHIDPKRYEIIKEQYYRGLKNFEAEQPYQHAIYSIS 209
L +L K + F + Y+ + E QP I
Sbjct: 60 AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI-----KTEQRQPSMMTRMYIE 114
Query: 210 LCLFERAWSKTELLESLDGITREKLVEFSHDLLSKM----FIEALIHG--NANKQVGLSI 263
+R ++ ++ + ++R + L ++ + LI G + K +++
Sbjct: 115 --QRDRLYNDNQVFAKYN-VSRLQPYLKLRQALLELRPAKNV--LIDGVLGSGKTW-VAL 168
Query: 264 VKMLEEKLQTKLKAKPLLPSQL--LRFREIKIPEK-----SNLVYE-TQNAVHKSSCIEA 315
L K+Q K + ++ L + PE L+Y+ N +S
Sbjct: 169 DVCLSYKVQCK------MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222
Query: 316 YYQCGVQELRDNVLLELFYPIPDEHTHYQEQLGYIVVSGIRKSSGVQGL----RIIVQSD 371
+ ++ L L + Y+ L +V+ ++ + +I++ +
Sbjct: 223 IKL-RIHSIQAE-LRRLL-----KSKPYENCL--LVLLNVQNAKAWNAFNLSCKILLTTR 273
Query: 372 KHPLFVDSRIEAFL--AQMKDLISNMPDEEFQSHKEALS--AQRLE-KPKKLS------- 419
++ FL A + + + E S + L+ +P+ L
Sbjct: 274 ------FKQVTDFLSAATTTHISLDHHSMTL-TPDEVKSLLLKYLDCRPQDLPREVLTTN 326
Query: 420 -------GLSSR-------FWLEITTQQYNFDRAN--IEVAYLKSVTKENVLKFYDKRNY 463
S R W + N D+ IE + NVL+ + R
Sbjct: 327 PRRLSIIAESIRDGLATWDNW-----KHVNCDKLTTIIESSL-------NVLEPAEYRKM 374
Query: 464 TESL 467
+ L
Sbjct: 375 FDRL 378
Score = 43.3 bits (101), Expect = 2e-04
Identities = 47/287 (16%), Positives = 79/287 (27%), Gaps = 111/287 (38%)
Query: 14 KARVNNIVKSEFDKREYRGLELQNGMKKWTNP-SPNEFIA--TDFSLLPSDPDISPHPTI 70
A +N DK L ++ N P E+ S+ P I P +
Sbjct: 341 LATWDNWKHVNCDK-------LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI-PTILL 392
Query: 71 ------------------LYNSPLIRAW-------------------------HKQ-DDE 86
L+ L+ H+ D
Sbjct: 393 SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH 452
Query: 87 YRVPKLNASFEFISP------YAYL-----DPECTNMTHLFISLFKDALNEYSY-DAKL- 133
Y +PK S + I P Y+++ + E LF +F D + + + K+
Sbjct: 453 YNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLD----FRFLEQKIR 508
Query: 134 -AGLAWDLSNTKYGMMLGISGYSHKQSVLLSKVLDKLADF---SNHI---DPKRYEIIKE 186
AW+ S +L+ L +I DPK E
Sbjct: 509 HDSTAWNAS---------------------GSILNTLQQLKFYKPYICDNDPKY-----E 542
Query: 187 QYYRGLKNFEAEQPYQHAIYSISLCLFERAWSKTELLESLDGITREK 233
+ + +F + ++ I S L A L+ + I E
Sbjct: 543 RLVNAILDF-LPKIEENLICSKYTDLLRIA-----LMAEDEAIFEEA 583
>1k32_A Tricorn protease; protein degradation, substrate gating, serine
protease, beta propeller, proteasome, hydrolase; 2.00A
{Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1
b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Length = 1045
Score = 33.6 bits (76), Expect = 0.17
Identities = 21/244 (8%), Positives = 65/244 (26%), Gaps = 30/244 (12%)
Query: 76 LIRAWHKQDDEYRVPKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAG 135
++R + + + K + L + ++ +A
Sbjct: 623 MVRKDDGKIYTFPLEKPEDERTVETDKRPLVSSIHEEFLQMYDEAWKLARDNYWNEAVAK 682
Query: 136 LAWDLSNTKYGMMLGISGYSHKQSVLLSKVLDKLADFSNHIDPKRYEIIKEQYYRGLKNF 195
+ KY ++ + + S ++ ++ + ++ + +
Sbjct: 683 EISERIYEKYRNLVPLCKTRYDLSNVIVEMQGEYRTSHSYEMGGTFTDKDPFRSGRIA-- 740
Query: 196 EAEQPYQHAIYSISLCLFERAWSKTE--------------LLESLDGITREKLVEFSHDL 241
+ Y ++ ++ E L+E +DG +
Sbjct: 741 -CDFKLDGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPTGYLIEDIDG----------ETV 789
Query: 242 LSKMFIEALIHGNANKQVGLSIVKMLEEKLQTKLKAKPLLPSQLLRFREIKIPEKSNLVY 301
+ I ++ A + + +K + L + +R+R + V+
Sbjct: 790 GAGSNIYRVLSEKAGTSARIRLSGKGGDKRDLMI--DILDDDRFIRYR-SWVEANRRYVH 846
Query: 302 ETQN 305
E
Sbjct: 847 ERSK 850
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family,
PFL_5859, structural genomics, PSI-2, structure
initiative; 1.90A {Pseudomonas fluorescens}
Length = 434
Score = 31.9 bits (73), Expect = 0.50
Identities = 28/171 (16%), Positives = 49/171 (28%), Gaps = 16/171 (9%)
Query: 77 IRAWHKQDDEYRVPKLNASFEFISPYAYLDPECTNMTHLFISLFK---DALNEYSYDAKL 133
+ + E +P + F + + D + L ++ + +
Sbjct: 23 AKVLFVEARE--LPMFDLRLIFAAGSSQ-DGNAPGVALLTNAMLNEGVAGKDVGAIAQGF 79
Query: 134 AGLAWDLSNTKYGMMLGISGYSHKQSVLLSKVLDKLADFSNH--IDPKRYEIIKEQYYRG 191
GL D N Y M S S L A+ IK Q G
Sbjct: 80 EGLGADFGNGAYKDMAVASLRSLSAVDKREPALKLFAEVVGKPTFPADSLARIKNQMLAG 139
Query: 192 LKNFEAEQPYQHAIYSISLCLFE-----RAWSKTELLESLDGITREKLVEF 237
+ + + P + A + L+ A +S+ IT +L F
Sbjct: 140 FEY-QKQNPGKLASLELMKRLYGTHPYAHASDGDA--KSIPPITLAQLKAF 187
>3izx_A Structural protein VP3; cytoplasmic polyhedrosis virus, 3D
reconstruction, cryoem, F model; 3.10A {Bombyx mori
cypovirus 1} PDB: 3iz3_A 3j17_A* 3cnf_T
Length = 1058
Score = 29.2 bits (64), Expect = 3.4
Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 13/108 (12%)
Query: 61 DPDISPHPTILYNSPLIRAWHKQDDEYRVPKLNASFEFISPYAYLDPECTNMTHLFISL- 119
DP + TI + + + + + + + + P+ Y + T+ H L
Sbjct: 16 DPKPNQIRTITKPNTVPQLGTDYLYTFNSQRRSHTLRLLGPFQYFNFSETDRGHPLFRLP 75
Query: 120 ------------FKDALNEYSYDAKLAGLAWDLSNTKYGMMLGISGYS 155
D L+ + L + + + +Y MLG+ S
Sbjct: 76 LKYPSKAIPADELIDNLHSWMRSVHLLHVRSEDNTLRYNWMLGVYARS 123
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 28.0 bits (61), Expect = 4.5
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 13/30 (43%)
Query: 257 KQVGLSIVKMLEEKLQTKLK-----AKPLL 281
KQ ++ +KLQ LK + P L
Sbjct: 19 KQ---AL-----KKLQASLKLYADDSAPAL 40
Score = 27.2 bits (59), Expect = 7.7
Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 10/27 (37%)
Query: 82 KQDDEYRVPKLNASFEFISPYAYLDPE 108
KQ + KL AS + YA +
Sbjct: 19 KQA----LKKLQASLK---LYA---DD 35
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP
synthesys, open alpha/beta sheet, phosphotransferase,
transferase; HET: ADP; 1.39A {Enterococcus faecalis}
PDB: 1b7b_A 2we4_A*
Length = 310
Score = 28.3 bits (63), Expect = 5.6
Identities = 13/72 (18%), Positives = 28/72 (38%)
Query: 334 YPIPDEHTHYQEQLGYIVVSGIRKSSGVQGLRIIVQSDKHPLFVDSRIEAFLAQMKDLIS 393
P+ Q +GY + + + + G++ V + + VD EAF K +
Sbjct: 73 MPLDTCVAMTQGSIGYWLSNALNQELNKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGP 132
Query: 394 NMPDEEFQSHKE 405
+ + E + +
Sbjct: 133 FLTEAEAKEAMQ 144
>1co6_A Protein (cytochrome C2); electron transport(heme protein); HET:
HEM; 1.60A {Blastochloris viridis} SCOP: a.3.1.1 PDB:
1cry_A* 1io3_A*
Length = 107
Score = 26.4 bits (59), Expect = 8.5
Identities = 3/17 (17%), Positives = 9/17 (52%), Gaps = 1/17 (5%)
Query: 437 DRANIEVAYLKSVTKEN 453
+++ +AY+K +
Sbjct: 89 KVSDL-IAYIKQFNADG 104
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.134 0.391
Gapped
Lambda K H
0.267 0.0646 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,181,468
Number of extensions: 433310
Number of successful extensions: 846
Number of sequences better than 10.0: 1
Number of HSP's gapped: 836
Number of HSP's successfully gapped: 33
Length of query: 469
Length of database: 6,701,793
Length adjustment: 97
Effective length of query: 372
Effective length of database: 3,993,456
Effective search space: 1485565632
Effective search space used: 1485565632
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (26.7 bits)