BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8005
(91 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 80.5 bits (197), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 52/72 (72%)
Query: 7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQ 66
+K GK+A VR+C + G +YAAKFL+K+RR D +AEILHE+AVLE + R++
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 67 LHQVFESSHDMI 78
LH+V+E++ ++I
Sbjct: 94 LHEVYENTSEII 105
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
GK+A V++CR++ G QYAAKF++K+R + + +I EV++L+ + + ++ LH
Sbjct: 22 GKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
+V+E+ D+I
Sbjct: 81 EVYENKTDVI 90
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
G++A VR+CR + G +YAAKF++K+R S+ + EI EV +L R + I+ LH
Sbjct: 23 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLH 81
Query: 69 QVFESSHDMI 78
+FE+ D++
Sbjct: 82 DIFENKTDVV 91
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G QYAAKF++K+R + + +I EV++L+ + + ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
+V+E+ D+I
Sbjct: 81 EVYENKTDVI 90
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G QYAAKF++K+R + + +I EV++L+ + + ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
+V+E+ D+I
Sbjct: 81 EVYENKTDVI 90
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein
Kinase 3 (Dapk3) In Complex With A Beta-Carboline
Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein
Kinase 3 (Dapk3) In Complex With An Imidazo-Pyridazine
Ligand
Length = 283
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
G++A VR+CR + G +YAAKF++K+R S+ + EI EV +L R + I+ LH
Sbjct: 16 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLH 74
Query: 69 QVFESSHDMI 78
+FE+ D++
Sbjct: 75 DIFENKTDVV 84
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G QYAAKF++K+R + + +I EV++L+ + + ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
+V+E+ D+I
Sbjct: 81 EVYENKTDVI 90
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G QYAAKF++K+R + + +I EV++L+ + + ++ LH
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 79
Query: 69 QVFESSHDMI 78
+V+E+ D+I
Sbjct: 80 EVYENKTDVI 89
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With
N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G QYAAKF++K+R + + +I EV++L+ + + ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
+V+E+ D+I
Sbjct: 81 EVYENKTDVI 90
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1)
In Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G QYAAKF++K+R + + +I EV++L+ + + ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
+V+E+ D+I
Sbjct: 81 EVYENKTDVI 90
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G QYAAKF++K+R + + +I EV++L+ + + ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
+V+E+ D+I
Sbjct: 81 EVYENKTDVI 90
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain
Of Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G QYAAKF++K+R + + +I EV++L+ + + ++ LH
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 79
Query: 69 QVFESSHDMI 78
+V+E+ D+I
Sbjct: 80 EVYENKTDVI 89
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G QYAAKF++K+R + + +I EV++L+ + + ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
+V+E+ D+I
Sbjct: 81 EVYENKTDVI 90
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G QYAAKF++K+R + + +I EV++L+ + + ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
+V+E+ D+I
Sbjct: 81 EVYENKTDVI 90
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
G++A VR+CR + G +YAAKF++K+R R + EI EV +L R + I+ LH
Sbjct: 37 GQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR-HPNIITLH 95
Query: 69 QVFESSHDMI 78
+FE+ D++
Sbjct: 96 DIFENKTDVV 105
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G QYAAKF++K+R + + +I EV++L+ + + ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
+V+E+ D+I
Sbjct: 81 EVYENKTDVI 90
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G QYAAKF++K+R + + +I EV++L+ + + ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
+V+E+ D+I
Sbjct: 81 EVYENKTDVI 90
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
G +A V++CR++ G QYAAKF++K+R + + +I EV++L+ + + ++ LH
Sbjct: 22 GVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
+V+E+ D+I
Sbjct: 81 EVYENKTDVI 90
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G +YAAKF++K++ R + EI EV++L + ++ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLH 81
Query: 69 QVFESSHDMI 78
V+E+ D++
Sbjct: 82 DVYENRTDVV 91
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2 In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2 In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2 In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2 In Complex With Amp
Length = 361
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G +YAAKF++K++ R + EI EV++L + I+ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLH 81
Query: 69 QVFESSHDMI 78
V+E+ D++
Sbjct: 82 DVYENRTDVV 91
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G +YAAKF++K++ R + EI EV++L + ++ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLH 81
Query: 69 QVFESSHDMI 78
V+E+ D++
Sbjct: 82 DVYENRTDVV 91
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G +YAAKF++K++ R + EI EV++L + ++ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLH 81
Query: 69 QVFESSHDMI 78
V+E+ D++
Sbjct: 82 DVYENRTDVV 91
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G +YAAKF++K++ R + EI EV++L + ++ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLH 81
Query: 69 QVFESSHDMI 78
V+E+ D++
Sbjct: 82 DVYENRTDVV 91
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
G++A V++CR++ G +YAAKF++K++ R + EI EV++L + ++ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLH 81
Query: 69 QVFESSHDMI 78
V+E+ D++
Sbjct: 82 DVYENRTDVV 91
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
G++ V +C + G + AAK + K R K E+ +E++V+ ++ ++QL+ FE
Sbjct: 100 GRFGQVHKCEETATGLKLAAKII--KTRGMKDKEEVKNEISVMNQLD-HANLIQLYDAFE 156
Query: 73 SSHDMI 78
S +D++
Sbjct: 157 SKNDIV 162
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 37.7 bits (86), Expect = 0.001, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQL 67
K G Y V CRD+ + A K +RK ST +++L EVAVL+ + I++L
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD-HPNIMKL 101
Query: 68 HQVFESSHD 76
+ FE +
Sbjct: 102 YDFFEDKRN 110
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of
Msk1 In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of
Msk1 In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of
Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of
Msk1
Length = 325
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Query: 8 KSFPLGK--YATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIV 65
K PLG+ ++ R+C +K+ +A K + K+ ++A E+ L+ C + IV
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIV 69
Query: 66 QLHQVFESSHDMI 78
+LH+VF HD +
Sbjct: 70 KLHEVF---HDQL 79
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
G YA V+ +NG +YA K + K+ + ++ + EV L C+ N I++L + FE
Sbjct: 24 GAYAKVQGAVSLQNGKEYAVKIIEKQAGHS--RSRVFREVETLYQCQGNKNILELIEFFE 81
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
G + V R +R G +AAKF+ S K + E+ + R + +V LH FE
Sbjct: 168 GAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLR-HPTLVNLHDAFE 224
Query: 73 SSHDMI 78
++M+
Sbjct: 225 DDNEMV 230
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 35.4 bits (80), Expect = 0.009, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
G + V R +R G +AAKF+ S K + E+ + R + +V LH FE
Sbjct: 62 GAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLR-HPTLVNLHDAFE 118
Query: 73 SSHDMI 78
++M+
Sbjct: 119 DDNEMV 124
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 6 ITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIV 65
I + G++ V RC + + Y AKF++ K TD + + E+++L R + I+
Sbjct: 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK--GTD-QVLVKKEISILNIAR-HRNIL 64
Query: 66 QLHQVFESSHDMI 78
LH+ FES +++
Sbjct: 65 HLHESFESMEELV 77
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 32.7 bits (73), Expect = 0.048, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQ 66
K G Y V C+D+ G + A K ++K +T +L EVAVL+ + I++
Sbjct: 27 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HPNIMK 85
Query: 67 LHQVFESSHD 76
L++ FE +
Sbjct: 86 LYEFFEDKRN 95
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 32.7 bits (73), Expect = 0.056, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQ 66
K G Y V C+D+ G + A K ++K +T +L EVAVL+ + I++
Sbjct: 10 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HPNIMK 68
Query: 67 LHQVFESSHD 76
L++ FE +
Sbjct: 69 LYEFFEDKRN 78
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.3 bits (72), Expect = 0.061, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
G + V +C+DR +YA K + K + IL EV +L+ + I++L ++ E
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLFEILE 91
Query: 73 SS 74
S
Sbjct: 92 DS 93
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 32.3 bits (72), Expect = 0.064, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
G + V +C+DR +YA K + K + IL EV +L+ + I++L ++ E
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLFEILE 91
Query: 73 SS 74
S
Sbjct: 92 DS 93
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of
Cryptosporidium Parvum Calcium Dependent Protein Kinase
In Complex With 3- Mb-Pp1
Length = 287
Score = 32.3 bits (72), Expect = 0.065, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
G + V +C+DR +YA K + K + IL EV +L+ + I++L ++ E
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLFEILE 91
Query: 73 SS 74
S
Sbjct: 92 DS 93
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
G + V RC ++ G + AKF+ K + +E++++ + +++ LH FE
Sbjct: 62 GAFGVVHRCVEKATGRVFVAKFINTPYPLD--KYTVKNEISIMNQLH-HPKLINLHDAFE 118
Query: 73 SSHDMI 78
++M+
Sbjct: 119 DKYEMV 124
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC--NSRIVQLH 68
G ++ VRRC G +YAAK + K+ S ++ E + CR + IV+LH
Sbjct: 15 GAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARI---CRLLKHPNIVRLH 69
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC--NSRIVQLH 68
G ++ VRRC G +YAAK + K+ S ++ E + CR +S IV+LH
Sbjct: 15 GAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARI---CRLLKHSNIVRLH 69
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 31.2 bits (69), Expect = 0.15, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 12/72 (16%)
Query: 13 GKYATVRRCRDRKNGTQYA------AKFLRKKRRST-DLKAE-----ILHEVAVLEACRC 60
G ++ VRRC +R+ G Q+A AKF ST DLK E +L ++E
Sbjct: 35 GAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLET 94
Query: 61 NSRIVQLHQVFE 72
S L+ VFE
Sbjct: 95 YSSDGMLYMVFE 106
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 31.2 bits (69), Expect = 0.15, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 12/72 (16%)
Query: 13 GKYATVRRCRDRKNGTQYA------AKFLRKKRRST-DLKAE-----ILHEVAVLEACRC 60
G ++ VRRC +R+ G Q+A AKF ST DLK E +L ++E
Sbjct: 37 GPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLET 96
Query: 61 NSRIVQLHQVFE 72
S L+ VFE
Sbjct: 97 YSSDGMLYMVFE 108
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 31.2 bits (69), Expect = 0.16, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 12/72 (16%)
Query: 13 GKYATVRRCRDRKNGTQYA------AKFLRKKRRST-DLKAE-----ILHEVAVLEACRC 60
G ++ VRRC +R+ G Q+A AKF ST DLK E +L ++E
Sbjct: 35 GPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLET 94
Query: 61 NSRIVQLHQVFE 72
S L+ VFE
Sbjct: 95 YSSDGMLYMVFE 106
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 31.2 bits (69), Expect = 0.16, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC--NSRIVQLH 68
G ++ VRRC G +YAAK + K+ S ++ E + CR + IV+LH
Sbjct: 15 GAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARI---CRLLKHPNIVRLH 69
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 30.8 bits (68), Expect = 0.18, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNS 62
N + + G ++ VRRC + G ++AAK + K+ S ++ E + + +
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HP 64
Query: 63 RIVQLHQVF--ESSHDMI 78
IV+LH ES H ++
Sbjct: 65 NIVRLHDSIQEESFHYLV 82
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 30.8 bits (68), Expect = 0.18, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNS 62
N + + G ++ VRRC + G ++AAK + K+ S ++ E + + +
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HP 65
Query: 63 RIVQLHQVF--ESSHDMI 78
IV+LH ES H ++
Sbjct: 66 NIVRLHDSIQEESFHYLV 83
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 30.8 bits (68), Expect = 0.22, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNS 62
N + + G ++ VRRC + G ++AAK + K+ S ++ E + + +
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HP 88
Query: 63 RIVQLHQVF--ESSHDMI 78
IV+LH ES H ++
Sbjct: 89 NIVRLHDSIQEESFHYLV 106
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6
Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6
Kinase
Length = 330
Score = 30.4 bits (67), Expect = 0.24, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 6 ITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEIL 49
+ ++ +G Y+ +RC + +YA K + K +R + EIL
Sbjct: 31 VKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL 74
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 30.4 bits (67), Expect = 0.29, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 6 ITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEIL 49
+ ++ +G Y+ +RC + +YA K + K +R + EIL
Sbjct: 31 VKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL 74
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 30.0 bits (66), Expect = 0.31, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC--NSRIVQLH-Q 69
G ++ VRRC G +YAAK + K+ S ++ E + CR + IV+LH
Sbjct: 33 GAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARI---CRLLKHPNIVRLHDS 89
Query: 70 VFESSH 75
+ E H
Sbjct: 90 ISEEGH 95
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST 42
N + + G ++ VRRC + G ++AAK + K+ S
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA 46
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 28.5 bits (62), Expect = 0.94, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 5 KITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEIL 49
++ + +G Y+ +RC + ++A K + K +R + EIL
Sbjct: 25 EVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEIL 69
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 28.5 bits (62), Expect = 0.95, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 5 KITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEIL 49
++ + +G Y+ +RC + ++A K + K +R + EIL
Sbjct: 25 EVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEIL 69
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 4 TKITKSFPL------GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEA 57
T+ T+ + L G ++ VRRC G +YAA + K+ S ++ E +
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARI--- 63
Query: 58 CRC--NSRIVQLH-QVFESSH 75
CR + IV+LH + E H
Sbjct: 64 CRLLKHPNIVRLHDSISEEGH 84
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein
Kinase Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 5 KITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKK 38
+I ++ G + V R R NG YA K L+K+
Sbjct: 9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKE 42
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
G + + ++G QY K + R S+ + E EVAVL + + IVQ + FE
Sbjct: 35 GSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK-HPNIVQYRESFE 93
Query: 73 SS 74
+
Sbjct: 94 EN 95
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 13 GKYATVRRCRDRKNGTQYAA-KFLRKKRRSTDLKAEILHEVAVL 55
G Y V + RD KNG ++ A K +R + + + EVAVL
Sbjct: 22 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With
The Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 26.9 bits (58), Expect = 2.6, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 13 GKYATVRRCRDRKNGTQYAA-KFLRKKRRSTDLKAEILHEVAVL 55
G Y V + RD KNG ++ A K +R + + + EVAVL
Sbjct: 22 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 26.9 bits (58), Expect = 2.6, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 13 GKYATVRRCRDRKNGTQYAA-KFLRKKRRSTDLKAEILHEVAVL 55
G Y V + RD KNG ++ A K +R + + + EVAVL
Sbjct: 22 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRS 41
G ++ VRRC + +YAAK + K+ S
Sbjct: 42 GAFSVVRRCVKKTPTQEYAAKIINTKKLS 70
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
G Y V +CR+R G A K + +K L E+ +L+ + + +V L +VF
Sbjct: 14 GSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK-HPNLVNLLEVF 71
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 26.9 bits (58), Expect = 3.1, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 5 KITKSFPLGKYATVRRCRDRKNGTQYAAKFLRK-----KRRSTDLKAEILHEVAVLEACR 59
K+ + GK VR+ G YA K L+K K ++T+ E VLE R
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTE---HTRTERQVLEHIR 116
Query: 60 CNSRIVQLHQVFES 73
+ +V LH F++
Sbjct: 117 QSPFLVTLHYAFQT 130
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 26.6 bits (57), Expect = 4.2, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
G Y V + R +++G YA K R +A L EV E + V+L Q +E
Sbjct: 68 GSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE 127
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 25.8 bits (55), Expect = 6.7, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKK-----RRSTDLK------AEILHEVAVLEACRCN 61
G Y V C+++ ++ A K ++K R S D K EI +E+++L++ +
Sbjct: 47 GAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD-H 105
Query: 62 SRIVQLHQVFE 72
I++L VFE
Sbjct: 106 PNIIKLFDVFE 116
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 25.8 bits (55), Expect = 6.7, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 12 LGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVL 55
+G Y TV + RD +G A K +R L + EVA+L
Sbjct: 14 VGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALL 57
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 25.8 bits (55), Expect = 6.7, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 12 LGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVL 55
+G Y TV + RD +G A K +R L + EVA+L
Sbjct: 14 VGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALL 57
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 25.8 bits (55), Expect = 6.7, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 12 LGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVL 55
+G Y TV + RD +G A K +R L + EVA+L
Sbjct: 14 VGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALL 57
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.131 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,131,669
Number of Sequences: 62578
Number of extensions: 56234
Number of successful extensions: 274
Number of sequences better than 100.0: 73
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 199
Number of HSP's gapped (non-prelim): 73
length of query: 91
length of database: 14,973,337
effective HSP length: 58
effective length of query: 33
effective length of database: 11,343,813
effective search space: 374345829
effective search space used: 374345829
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)