BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8011
(102 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6QM00|GADL1_BOVIN Glutamate decarboxylase-like protein 1 OS=Bos taurus GN=GADL1 PE=2
SV=2
Length = 521
Score = 112 bits (281), Expect = 6e-25, Method: Composition-based stats.
Identities = 48/76 (63%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQS-VLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 85
ADSV WNPHK+L A QC FL + +S +L C+SA+ASYLFQ+DKFYD YD+GDK IQ
Sbjct: 324 ADSVAWNPHKMLMAGIQCCAFLVKDKSDLLKRCYSANASYLFQQDKFYDVSYDTGDKSIQ 383
Query: 86 CGRKPDVLKFWFMWKA 101
C R+PD KFW WKA
Sbjct: 384 CSRRPDAFKFWLAWKA 399
>sp|Q28D99|GADL1_XENTR Glutamate decarboxylase-like protein 1 (Fragment) OS=Xenopus
tropicalis GN=gadl1 PE=2 SV=2
Length = 511
Score = 110 bits (276), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/76 (63%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQS-VLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 85
ADSV WNPHK+L A QC L R S +L CHSA A+YLFQ+DKFYD +YD+GDK IQ
Sbjct: 314 ADSVAWNPHKMLMAGIQCCALLVRDNSGLLKRCHSAEATYLFQQDKFYDVQYDTGDKSIQ 373
Query: 86 CGRKPDVLKFWFMWKA 101
C R+ D KFW MWKA
Sbjct: 374 CSRRADAFKFWMMWKA 389
>sp|Q80WP8|GADL1_MOUSE Glutamate decarboxylase-like protein 1 OS=Mus musculus GN=Gadl1
PE=2 SV=3
Length = 550
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQS-VLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 85
ADSV WNPHK+L A QCS L + +S +L +C+SA A+YLFQ+DKFYD YD+GDK IQ
Sbjct: 353 ADSVAWNPHKMLMAGIQCSALLVKDKSDLLKKCYSAKATYLFQQDKFYDVSYDTGDKSIQ 412
Query: 86 CGRKPDVLKFWFMWKA 101
C R+PD KFW WKA
Sbjct: 413 CSRRPDAFKFWMTWKA 428
>sp|P48319|DCE1_PIG Glutamate decarboxylase 1 OS=Sus scrofa GN=GAD1 PE=2 SV=1
Length = 594
Score = 106 bits (265), Expect = 4e-23, Method: Composition-based stats.
Identities = 44/76 (57%), Positives = 52/76 (68%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
ADSVTWNPHK++ QCS L + + +L C+ A YLFQ DK YD YD+GDK IQC
Sbjct: 396 ADSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQC 455
Query: 87 GRKPDVLKFWFMWKAK 102
GR D+ KFW MWKAK
Sbjct: 456 GRHVDIFKFWLMWKAK 471
>sp|Q9DBE0|CSAD_MOUSE Cysteine sulfinic acid decarboxylase OS=Mus musculus GN=Csad PE=2
SV=1
Length = 493
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQS-VLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 85
ADSV WNPHKLL A QCS L R S +L CH + ASYLFQ+DKFYD D+GDK +Q
Sbjct: 296 ADSVAWNPHKLLAAGLQCSALLLRDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQ 355
Query: 86 CGRKPDVLKFWFMWKAK 102
CGR+ D LK W MWKA+
Sbjct: 356 CGRRVDCLKLWLMWKAQ 372
>sp|Q6ZQY3|GADL1_HUMAN Glutamate decarboxylase-like protein 1 OS=Homo sapiens GN=GADL1
PE=2 SV=4
Length = 521
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQS-VLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 85
ADSV WNPHK+L A QC L + +S +L +C+SA ASYLFQ+DKFYD YD+GDK IQ
Sbjct: 324 ADSVAWNPHKMLMAGIQCCALLVKDKSDLLKKCYSAKASYLFQQDKFYDVSYDTGDKSIQ 383
Query: 86 CGRKPDVLKFWFMWKA 101
C R+PD KFW WKA
Sbjct: 384 CSRRPDAFKFWMTWKA 399
>sp|Q05329|DCE2_HUMAN Glutamate decarboxylase 2 OS=Homo sapiens GN=GAD2 PE=1 SV=1
Length = 585
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
A+SVTWNPHK++ P QCS L R + ++ C+ ASYLFQ+DK YD YD+GDK +QC
Sbjct: 387 ANSVTWNPHKMMGVPLQCSALLVREEGLMQNCNQMHASYLFQQDKHYDLSYDTGDKALQC 446
Query: 87 GRKPDVLKFWFMWKAK 102
GR DV K W MW+AK
Sbjct: 447 GRHVDVFKLWLMWRAK 462
>sp|Q05683|DCE2_RAT Glutamate decarboxylase 2 OS=Rattus norvegicus GN=Gad2 PE=1 SV=1
Length = 585
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
A+SVTWNPHK++ P QCS L R + ++ C+ ASYLFQ+DK YD YD+GDK +QC
Sbjct: 387 ANSVTWNPHKMMGVPLQCSALLVREEGLMQSCNQMHASYLFQQDKHYDLSYDTGDKALQC 446
Query: 87 GRKPDVLKFWFMWKAK 102
GR DV K W MW+AK
Sbjct: 447 GRHVDVFKLWLMWRAK 462
>sp|P48321|DCE2_PIG Glutamate decarboxylase 2 OS=Sus scrofa GN=GAD2 PE=2 SV=1
Length = 585
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
A+SVTWNPHK++ P QCS L R + ++ C+ ASYLFQ+DK YD YD+GDK +QC
Sbjct: 387 ANSVTWNPHKMMGVPLQCSALLVREEGLMQSCNQMHASYLFQQDKHYDLSYDTGDKALQC 446
Query: 87 GRKPDVLKFWFMWKAK 102
GR DV K W MW+AK
Sbjct: 447 GRHVDVFKLWLMWRAK 462
>sp|Q4PRC2|DCE2_CANFA Glutamate decarboxylase 2 OS=Canis familiaris GN=GAD2 PE=2 SV=1
Length = 585
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
A+SVTWNPHK++ P QCS L R + ++ C+ ASYLFQ+DK YD YD+GDK +QC
Sbjct: 387 ANSVTWNPHKMMGVPLQCSALLVREEGLMQSCNQMHASYLFQQDKHYDLSYDTGDKALQC 446
Query: 87 GRKPDVLKFWFMWKAK 102
GR DV K W MW+AK
Sbjct: 447 GRHVDVFKLWLMWRAK 462
>sp|P48320|DCE2_MOUSE Glutamate decarboxylase 2 OS=Mus musculus GN=Gad2 PE=2 SV=1
Length = 585
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
A+SVTWNPHK++ P QCS L R + ++ C+ ASYLFQ+DK YD YD+GDK +QC
Sbjct: 387 ANSVTWNPHKMMGVPLQCSALLVREEGLMQSCNQMHASYLFQQDKHYDLSYDTGDKALQC 446
Query: 87 GRKPDVLKFWFMWKAK 102
GR DV K W MW+AK
Sbjct: 447 GRHVDVFKLWLMWRAK 462
>sp|Q64611|CSAD_RAT Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus GN=Csad
PE=1 SV=1
Length = 493
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQS-VLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 85
ADSV WNPHKLL A QCS L R S +L CH + ASYLFQ+DKFY+ D+GDK +Q
Sbjct: 296 ADSVAWNPHKLLAAGLQCSALLLRDTSNLLKRCHGSQASYLFQQDKFYNVALDTGDKVVQ 355
Query: 86 CGRKPDVLKFWFMWKAK 102
CGR+ D LK W MWKA+
Sbjct: 356 CGRRVDCLKLWLMWKAQ 372
>sp|Q9Y600|CSAD_HUMAN Cysteine sulfinic acid decarboxylase OS=Homo sapiens GN=CSAD PE=1
SV=2
Length = 493
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQS-VLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 85
ADSV WNPHKLL A QCS L + S +L CH + ASYLFQ+DKFYD D+GDK +Q
Sbjct: 296 ADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQ 355
Query: 86 CGRKPDVLKFWFMWKAK 102
CGR+ D LK W MWKA+
Sbjct: 356 CGRRVDCLKLWLMWKAQ 372
>sp|P18088|DCE1_RAT Glutamate decarboxylase 1 OS=Rattus norvegicus GN=Gad1 PE=2 SV=1
Length = 593
Score = 105 bits (261), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/76 (56%), Positives = 52/76 (68%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
A+SVTWNPHK++ QCS L + + +L C+ A YLFQ DK YD YD+GDK IQC
Sbjct: 395 ANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQC 454
Query: 87 GRKPDVLKFWFMWKAK 102
GR D+ KFW MWKAK
Sbjct: 455 GRHVDIFKFWLMWKAK 470
>sp|P14748|DCE1_FELCA Glutamate decarboxylase 1 OS=Felis catus GN=GAD1 PE=2 SV=3
Length = 594
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/76 (56%), Positives = 52/76 (68%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
A+SVTWNPHK++ QCS L + + +L C+ A YLFQ DK YD YD+GDK IQC
Sbjct: 396 ANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQC 455
Query: 87 GRKPDVLKFWFMWKAK 102
GR D+ KFW MWKAK
Sbjct: 456 GRHVDIFKFWLMWKAK 471
>sp|A0PA85|DCE1_CANFA Glutamate decarboxylase 1 OS=Canis familiaris GN=GAD1 PE=2 SV=1
Length = 594
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/76 (56%), Positives = 52/76 (68%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
A+SVTWNPHK++ QCS L + + +L C+ A YLFQ DK YD YD+GDK IQC
Sbjct: 396 ANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQC 455
Query: 87 GRKPDVLKFWFMWKAK 102
GR D+ KFW MWKAK
Sbjct: 456 GRHVDIFKFWLMWKAK 471
>sp|Q99259|DCE1_HUMAN Glutamate decarboxylase 1 OS=Homo sapiens GN=GAD1 PE=1 SV=1
Length = 594
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/76 (56%), Positives = 52/76 (68%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
A+SVTWNPHK++ QCS L + + +L C+ A YLFQ DK YD YD+GDK IQC
Sbjct: 396 ANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQC 455
Query: 87 GRKPDVLKFWFMWKAK 102
GR D+ KFW MWKAK
Sbjct: 456 GRHVDIFKFWLMWKAK 471
>sp|Q5R7S7|DCE1_PONAB Glutamate decarboxylase 1 OS=Pongo abelii GN=GAD1 PE=2 SV=1
Length = 594
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/76 (56%), Positives = 52/76 (68%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
A+SVTWNPHK++ QCS L + + +L C+ A YLFQ DK YD YD+GDK IQC
Sbjct: 396 ANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQC 455
Query: 87 GRKPDVLKFWFMWKAK 102
GR D+ KFW MWKAK
Sbjct: 456 GRHVDIFKFWLMWKAK 471
>sp|Q0VCA1|DCE1_BOVIN Glutamate decarboxylase 1 OS=Bos taurus GN=GAD1 PE=2 SV=1
Length = 594
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/76 (56%), Positives = 52/76 (68%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
A+SVTWNPHK++ QCS L + + +L C+ A YLFQ DK YD YD+GDK IQC
Sbjct: 396 ANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQC 455
Query: 87 GRKPDVLKFWFMWKAK 102
GR D+ KFW MWKAK
Sbjct: 456 GRHVDIFKFWLMWKAK 471
>sp|P48318|DCE1_MOUSE Glutamate decarboxylase 1 OS=Mus musculus GN=Gad1 PE=2 SV=2
Length = 593
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/76 (56%), Positives = 52/76 (68%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
A+SVTWNPHK++ QCS L + + +L C+ A YLFQ DK YD YD+GDK IQC
Sbjct: 395 ANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQC 454
Query: 87 GRKPDVLKFWFMWKAK 102
GR D+ KFW MWKAK
Sbjct: 455 GRHVDIFKFWLMWKAK 470
>sp|Q5IS68|DCE1_PANTR Glutamate decarboxylase 1 OS=Pan troglodytes GN=GAD1 PE=2 SV=1
Length = 594
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/76 (56%), Positives = 52/76 (68%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
A+SVTWNPHK++ QCS L + + +L C+ A YLFQ DK YD YD+GDK IQC
Sbjct: 396 ANSVTWNPHKMMGVLLQCSAILIKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQC 455
Query: 87 GRKPDVLKFWFMWKAK 102
GR D+ KFW MWKAK
Sbjct: 456 GRHVDIFKFWLMWKAK 471
>sp|P20228|DCE_DROME Glutamate decarboxylase OS=Drosophila melanogaster GN=Gad1 PE=2
SV=2
Length = 510
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 49/76 (64%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
ADSVTWNPHKL+ A QCS + +L C+ SA YLF DK YD YD+GDK IQC
Sbjct: 313 ADSVTWNPHKLMGALLQCSTIHFKEDGLLISCNQMSAEYLFMTDKQYDISYDTGDKVIQC 372
Query: 87 GRKPDVLKFWFMWKAK 102
GR D+ K W W+AK
Sbjct: 373 GRHNDIFKLWLQWRAK 388
>sp|P14173|DDC_RAT Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus GN=Ddc
PE=1 SV=1
Length = 480
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 33/75 (44%)
Query: 26 LADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 85
ADS +NPHK L CS + ++ LTE + YL + D I
Sbjct: 293 FADSFNFNPHKWLLVNFDCSAMWVKKRTDLTEAFNMDPVYLRHSHQDSGLITDYRHWQIP 352
Query: 86 CGRKPDVLKFWFMWK 100
GR+ LK WF+++
Sbjct: 353 LGRRFRSLKMWFVFR 367
>sp|O88533|DDC_MOUSE Aromatic-L-amino-acid decarboxylase OS=Mus musculus GN=Ddc PE=2
SV=1
Length = 480
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 26 LADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 85
ADS +NPHK L CS + ++ LT + YL K D+ + + +H Q
Sbjct: 293 FADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFNMDPVYL--KHSHQDSGFITDYRHWQ 350
Query: 86 C--GRKPDVLKFWFMWK 100
GR+ LK WF+++
Sbjct: 351 IPLGRRFRSLKMWFVFR 367
>sp|P17770|DDC_CATRO Aromatic-L-amino-acid decarboxylase OS=Catharanthus roseus GN=TDC
PE=2 SV=1
Length = 500
Score = 38.1 bits (87), Expect = 0.014, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 28 DSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCG 87
DS++ +PHK L A C+ + +L + + YL K D D + I G
Sbjct: 311 DSLSLSPHKWLLAYLDCTCLWVKQPHLLLRALTTNPEYLKNKQSDLDKVVDFKNWQIATG 370
Query: 88 RKPDVLKFWFMWKA 101
RK LK W + ++
Sbjct: 371 RKFRSLKLWLILRS 384
>sp|Q9Z3R1|RHBB_RHIME L-2,4-diaminobutyrate decarboxylase OS=Rhizobium meliloti (strain
1021) GN=rhbB PE=3 SV=1
Length = 495
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 11 SQAGGLDHFHQPRQVLADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKD 70
S+ GL+H H S+T + HK+L P C V L R ++ S A YL +D
Sbjct: 295 SRLEGLEHAH--------SITLDFHKMLFQPISCGVLLLRDRADFAPLAS-KADYLNPED 345
Query: 71 KFYDTKYDSGDKHIQCGRKPDVLKFWFMWKA 101
+ + ++ +Q R+ D LK +A
Sbjct: 346 AVFADAPNLVERSMQTTRRADALKILMTMRA 376
>sp|P20711|DDC_HUMAN Aromatic-L-amino-acid decarboxylase OS=Homo sapiens GN=DDC PE=1
SV=2
Length = 480
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 26 LADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 85
ADS +NPHK L CS + ++ LT +YL K D+ + +H Q
Sbjct: 293 FADSFNFNPHKWLLVNFDCSAMWVKKRTDLTGAFRLDPTYL--KHSHQDSGLITDYRHWQ 350
Query: 86 C--GRKPDVLKFWFMWK 100
GR+ LK WF+++
Sbjct: 351 IPLGRRFRSLKMWFVFR 367
>sp|Q7XHL3|TYDC1_ORYSJ Tyrosine decarboxylase 1 OS=Oryza sativa subsp. japonica
GN=Os07g0437500 PE=2 SV=1
Length = 497
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
ADS N HK CS+ + +S L + S + +L K ++ D D I
Sbjct: 305 ADSFNMNAHKWFLTNFDCSLLWVKDRSFLIQSLSTNPEFLKNKASQANSVVDFKDWQIPL 364
Query: 87 GRKPDVLKFWFMWK 100
GR+ LK W + +
Sbjct: 365 GRRFRSLKLWMVLR 378
>sp|P27718|DDC_BOVIN Aromatic-L-amino-acid decarboxylase OS=Bos taurus GN=DDC PE=2 SV=2
Length = 487
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 26 LADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 85
ADS +NPHK L CS + ++ LT YL + D+ + +H Q
Sbjct: 293 FADSFNFNPHKWLLVNFDCSAMWVKKRTDLTGAFRLDPVYL--RHSHQDSGLITDYRHWQ 350
Query: 86 --CGRKPDVLKFWFMWK 100
GR+ LK WF+++
Sbjct: 351 LPLGRRFRSLKMWFVFR 367
>sp|Q9M0G4|TYDC2_ARATH Probable tyrosine decarboxylase 2 OS=Arabidopsis thaliana
GN=At4g28680 PE=2 SV=1
Length = 545
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
ADS N HK L A Q CS + + L + + YL K DT + D I
Sbjct: 352 ADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISL 411
Query: 87 GRKPDVLKFWFMWK 100
R+ LK W + +
Sbjct: 412 SRRFRSLKLWMVLR 425
>sp|Q8RY79|TYDC1_ARATH Tyrosine decarboxylase 1 OS=Arabidopsis thaliana GN=ELI5 PE=2 SV=1
Length = 490
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 30/74 (40%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
ADS N HK CS+ + Q LT S + +L K + D D I
Sbjct: 300 ADSFNMNAHKWFLTNFDCSLLWVKDQDSLTLALSTNPEFLKNKASQANLVVDYKDWQIPL 359
Query: 87 GRKPDVLKFWFMWK 100
GR+ LK W + +
Sbjct: 360 GRRFRSLKLWMVLR 373
>sp|P80041|DDC_PIG Aromatic-L-amino-acid decarboxylase OS=Sus scrofa GN=DDC PE=1 SV=2
Length = 486
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 31/75 (41%)
Query: 26 LADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 85
ADS +NPHK L CS + ++ LT YL + D +
Sbjct: 293 FADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLP 352
Query: 86 CGRKPDVLKFWFMWK 100
GR+ LK WF+++
Sbjct: 353 LGRRFRSLKMWFVFR 367
>sp|P22781|DDC_CAVPO Aromatic-L-amino-acid decarboxylase OS=Cavia porcellus GN=DDC PE=2
SV=1
Length = 480
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 26 LADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 85
ADS +NPHK L CS + ++ L YL K D+ + +H Q
Sbjct: 293 FADSFNFNPHKWLLVNFDCSAMWVKQRTDLIGAFKLDPVYL--KHGHQDSGLITDYRHWQ 350
Query: 86 C--GRKPDVLKFWFMWK 100
GR+ LK WF+++
Sbjct: 351 IPLGRRFRSLKMWFVFR 367
>sp|P54771|TYDC5_PAPSO Tyrosine/DOPA decarboxylase 5 OS=Papaver somniferum GN=TYDC5 PE=2
SV=1
Length = 523
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTK--YDSGDKHI 84
ADS + N HK C + + L + S S YL K+K D+K D D I
Sbjct: 312 ADSFSLNAHKWFFTTLDCCCLWVKDSNALVKALSTSPEYL--KNKATDSKQVIDYKDWQI 369
Query: 85 QCGRKPDVLKFWFMWKA 101
R+ +K W + ++
Sbjct: 370 ALSRRFRSMKLWLVLRS 386
>sp|Q06086|TYDC2_PETCR Tyrosine decarboxylase 2 OS=Petroselinum crispum GN=TYRDC-2 PE=2
SV=1
Length = 514
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 29/75 (38%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
ADS + N HK C R+ S L + S +L + D D I
Sbjct: 308 ADSFSLNAHKWFLTTLDCCCLWVRNPSALIKSLSTYPEFLKNNASETNKVVDYKDWQIML 367
Query: 87 GRKPDVLKFWFMWKA 101
R+ LK WF+ ++
Sbjct: 368 SRRFRALKLWFVLRS 382
>sp|Q06085|TYDC1_PETCR Tyrosine decarboxylase 1 (Fragment) OS=Petroselinum crispum
GN=TYRDC-1 PE=2 SV=1
Length = 432
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 28/75 (37%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
ADS + N HK C R S L + S +L + D D I
Sbjct: 285 ADSFSLNAHKWFLTTLDCCCLWVRDPSALIKSLSTYPEFLKNNASETNKVVDYKDWQIML 344
Query: 87 GRKPDVLKFWFMWKA 101
R+ LK WF+ ++
Sbjct: 345 SRRFRALKLWFVLRS 359
>sp|P54768|TYDC1_PAPSO Tyrosine/DOPA decarboxylase 1 OS=Papaver somniferum GN=TYDC1 PE=2
SV=1
Length = 518
Score = 32.3 bits (72), Expect = 0.97, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTK--YDSGDKHI 84
ADS + N HK C + L + S S YL K+K D+K D D I
Sbjct: 312 ADSFSLNAHKWFFTTLDCCCLWVKDSDSLVKALSTSPEYL--KNKATDSKQVIDYKDWQI 369
Query: 85 QCGRKPDVLKFWFMWKA 101
R+ +K W + ++
Sbjct: 370 ALSRRFRSMKLWLVLRS 386
>sp|Q06088|TYDC4_PETCR Tyrosine decarboxylase 4 OS=Petroselinum crispum GN=TYRDC-4 PE=2
SV=1
Length = 508
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 28/75 (37%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
ADS + N HK C R S L + S +L + D D I
Sbjct: 309 ADSFSLNAHKWFLTTLDCCCLWVRDPSALIKSLSTYPEFLKNNASETNKVVDYKDWQIML 368
Query: 87 GRKPDVLKFWFMWKA 101
R+ LK WF+ ++
Sbjct: 369 SRRFRALKLWFVLRS 383
>sp|Q06087|TYDC3_PETCR Tyrosine decarboxylase 3 OS=Petroselinum crispum GN=TYRDC-3 PE=2
SV=1
Length = 516
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 28/75 (37%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
ADS + N HK C R S L + S +L + D D I
Sbjct: 310 ADSFSLNAHKWFLTTLDCCCLWVRDPSALIKSLSTYPEFLKNNASETNKVVDYKDWQIML 369
Query: 87 GRKPDVLKFWFMWKA 101
R+ LK WF+ ++
Sbjct: 370 SRRFRALKLWFVLRS 384
>sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2 OS=Papaver somniferum GN=TYDC2 PE=2
SV=1
Length = 531
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 28/75 (37%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
ADS + N HK C + S L + S + YL K D D I
Sbjct: 310 ADSFSLNAHKWFFTTLDCCCLWVKDPSALVKALSTNPEYLRNKATESRQVVDYKDWQIAL 369
Query: 87 GRKPDVLKFWFMWKA 101
R+ LK W + ++
Sbjct: 370 SRRFRSLKLWMVLRS 384
>sp|P05031|DDC_DROME Aromatic-L-amino-acid decarboxylase OS=Drosophila melanogaster
GN=Ddc PE=1 SV=4
Length = 510
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
ADS +NPHK + CS + S + + YL K + D I
Sbjct: 328 ADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYL--KHDMQGSAPDYRHWQIPL 385
Query: 87 GRKPDVLKFWFMWK 100
GR+ LK WF+ +
Sbjct: 386 GRRFRALKLWFVLR 399
>sp|O96567|DDC_DROSI Aromatic-L-amino-acid decarboxylase OS=Drosophila simulans GN=Ddc
PE=3 SV=2
Length = 510
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
ADS +NPHK + CS + S + + YL K + D I
Sbjct: 328 ADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYL--KHDMQGSAPDYRHWQIPL 385
Query: 87 GRKPDVLKFWFMWK 100
GR+ LK WF+ +
Sbjct: 386 GRRFRALKLWFVLR 399
>sp|P48861|DDC_MANSE Aromatic-L-amino-acid decarboxylase OS=Manduca sexta GN=Ddc PE=2
SV=1
Length = 508
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
ADS +NPHK + CS + + + + YL K + + D I
Sbjct: 294 ADSFNFNPHKWMLVNFDCSAMWLKQPRWIVDAFNVDPLYL--KHEQQGSAPDYRHWQIPL 351
Query: 87 GRKPDVLKFWFMWK 100
GR+ LK WF+ +
Sbjct: 352 GRRFRSLKLWFVLR 365
>sp|O96571|DDC_DROLE Aromatic-L-amino-acid decarboxylase (Fragment) OS=Drosophila
lebanonensis GN=Ddc PE=3 SV=1
Length = 403
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 27 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 86
ADS +NPHK + CS + S + + YL K + D I
Sbjct: 220 ADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYL--KHDMQGSAPDYRHWQIPI 277
Query: 87 GRKPDVLKFWFMWK 100
GR+ LK WF+ +
Sbjct: 278 GRRFRALKLWFVLR 291
>sp|A9WML8|LEU1_RENSM 2-isopropylmalate synthase OS=Renibacterium salmoninarum (strain
ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB
2235) GN=leuA PE=3 SV=1
Length = 582
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 5 PAALPVSQAGGLDHFHQPRQVLADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASAS 64
P+ +PV + FH+ +V TW ++ TAP+ C+V L L + S +
Sbjct: 7 PSGMPVHR---YLPFHEQIEVELPDRTWPTKRITTAPRWCAVDLRDGNQALIDPMSPA-- 61
Query: 65 YLFQKDKFYDTKYDSGDKHIQCG 87
+K K ++ G K I+ G
Sbjct: 62 ---RKLKMFELLVKMGYKEIEVG 81
>sp|P20127|POLR_OYMV RNA replicase polyprotein OS=Ononis yellow mosaic virus PE=3 SV=1
Length = 1776
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 13/69 (18%)
Query: 7 ALPVSQAGGLDHFHQPRQVLADSVTWNPHKLLTAPQQCSVFLTRHQ-------SVLTECH 59
AL +S + G+ + P VL D H LL PQ V LTR + S+ T
Sbjct: 1082 ALTISSSQGMT-YSDPVTVLLDR-----HSLLITPQTALVALTRSRSGIYFIGSMYTASG 1135
Query: 60 SASASYLFQ 68
SA SY+F
Sbjct: 1136 SAGTSYMFS 1144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.133 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,180,735
Number of Sequences: 539616
Number of extensions: 1320063
Number of successful extensions: 2595
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2553
Number of HSP's gapped (non-prelim): 50
length of query: 102
length of database: 191,569,459
effective HSP length: 71
effective length of query: 31
effective length of database: 153,256,723
effective search space: 4750958413
effective search space used: 4750958413
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)