Query psy8011
Match_columns 102
No_of_seqs 102 out of 1055
Neff 6.4
Searched_HMMs 29240
Date Sat Aug 17 00:32:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8011.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8011hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e1o_A HDC, histidine decarbox 99.7 3.4E-17 1.1E-21 128.7 5.8 86 13-101 287-372 (481)
2 3vp6_A Glutamate decarboxylase 99.7 9.6E-17 3.3E-21 127.4 8.4 89 12-101 293-381 (511)
3 3k40_A Aromatic-L-amino-acid d 99.6 8E-17 2.7E-21 126.7 4.1 86 13-101 280-365 (475)
4 2okj_A Glutamate decarboxylase 99.6 1E-15 3.5E-20 120.1 8.2 88 13-101 291-378 (504)
5 2jis_A Cysteine sulfinic acid 99.6 3.3E-15 1.1E-19 117.9 7.5 89 12-101 304-393 (515)
6 1js3_A DDC;, DOPA decarboxylas 99.5 5E-15 1.7E-19 115.4 5.4 88 13-101 281-368 (486)
7 2qma_A Diaminobutyrate-pyruvat 99.5 4.4E-14 1.5E-18 110.7 6.0 81 16-101 306-386 (497)
8 2dgk_A GAD-beta, GADB, glutama 98.7 6.2E-09 2.1E-13 80.2 2.9 70 23-101 249-319 (452)
9 3hbx_A GAD 1, glutamate decarb 98.6 2.1E-08 7.1E-13 79.2 3.4 70 23-101 264-334 (502)
10 3bc8_A O-phosphoseryl-tRNA(SEC 98.2 1.9E-07 6.6E-12 74.3 0.6 43 16-58 244-288 (450)
11 3hl2_A O-phosphoseryl-tRNA(SEC 97.4 7.2E-05 2.5E-09 60.4 3.4 54 26-101 274-328 (501)
12 3mc6_A Sphingosine-1-phosphate 97.3 0.00022 7.6E-09 55.1 4.8 67 25-100 269-336 (497)
13 3mad_A Sphingosine-1-phosphate 97.0 0.00055 1.9E-08 53.3 3.8 67 25-100 301-368 (514)
14 2z67_A O-phosphoseryl-tRNA(SEC 96.0 0.0028 9.7E-08 48.8 2.1 30 26-55 288-317 (456)
15 3f9t_A TDC, L-tyrosine decarbo 94.7 0.027 9.3E-07 40.9 3.8 64 26-100 236-300 (397)
16 3m5u_A Phosphoserine aminotran 87.3 0.28 9.5E-06 37.2 2.2 30 23-53 181-210 (361)
17 1wyu_B Glycine dehydrogenase s 86.7 0.37 1.3E-05 37.0 2.6 27 26-52 256-287 (474)
18 2yrr_A Aminotransferase, class 83.3 0.63 2.2E-05 33.0 2.4 26 27-52 177-202 (353)
19 1iug_A Putative aspartate amin 82.0 0.7 2.4E-05 32.9 2.2 27 26-52 175-201 (352)
20 3nnk_A Ureidoglycine-glyoxylat 81.7 0.7 2.4E-05 33.7 2.1 27 26-52 190-216 (411)
21 2bkw_A Alanine-glyoxylate amin 81.6 0.74 2.5E-05 33.2 2.2 27 26-52 191-217 (385)
22 3isl_A Purine catabolism prote 80.9 0.78 2.7E-05 33.5 2.2 27 26-52 188-214 (416)
23 3qm2_A Phosphoserine aminotran 80.5 1 3.5E-05 34.4 2.7 28 25-53 211-238 (386)
24 2dr1_A PH1308 protein, 386AA l 78.5 1.2 4E-05 32.1 2.4 27 26-52 198-224 (386)
25 2x3l_A ORN/Lys/Arg decarboxyla 78.4 1.1 3.7E-05 34.3 2.3 26 27-52 202-227 (446)
26 3ffr_A Phosphoserine aminotran 76.5 1.9 6.6E-05 30.6 3.1 29 24-52 179-207 (362)
27 2z9v_A Aspartate aminotransfer 76.3 1.6 5.3E-05 31.7 2.6 26 27-52 187-212 (392)
28 1m32_A 2-aminoethylphosphonate 76.3 1.6 5.4E-05 31.0 2.6 27 26-52 183-209 (366)
29 3e77_A Phosphoserine aminotran 75.9 1.9 6.5E-05 32.9 3.0 28 25-53 196-223 (377)
30 1elu_A L-cysteine/L-cystine C- 75.7 2 7E-05 30.9 3.1 27 26-52 210-236 (390)
31 3zrp_A Serine-pyruvate aminotr 75.5 1.5 5.2E-05 31.5 2.3 27 26-52 179-205 (384)
32 2huf_A Alanine glyoxylate amin 74.6 1.7 5.8E-05 31.5 2.4 26 26-51 196-221 (393)
33 3ke3_A Putative serine-pyruvat 74.5 1.7 5.8E-05 32.0 2.4 27 26-52 189-215 (379)
34 1vjo_A Alanine--glyoxylate ami 74.1 1.9 6.4E-05 31.4 2.5 27 26-52 211-237 (393)
35 2e7j_A SEP-tRNA:Cys-tRNA synth 73.9 1.5 5.3E-05 31.4 2.0 26 27-52 200-225 (371)
36 3kgw_A Alanine-glyoxylate amin 72.3 2.2 7.7E-05 30.6 2.5 27 26-52 200-226 (393)
37 1qz9_A Kynureninase; kynurenin 72.1 2.8 9.5E-05 30.7 3.0 26 27-52 218-244 (416)
38 1rv3_A Serine hydroxymethyltra 71.2 2.9 0.0001 32.2 3.1 27 25-52 245-271 (483)
39 3f0h_A Aminotransferase; RER07 69.9 2.6 8.9E-05 30.3 2.4 26 27-52 197-222 (376)
40 3e9k_A Kynureninase; kynurenin 69.0 3.5 0.00012 31.1 3.0 27 26-52 266-293 (465)
41 2ch1_A 3-hydroxykynurenine tra 68.6 2.9 9.9E-05 30.3 2.5 25 27-51 196-220 (396)
42 2oqx_A Tryptophanase; lyase, p 68.5 3.6 0.00012 30.7 3.0 27 25-52 255-281 (467)
43 1svv_A Threonine aldolase; str 68.2 2.8 9.4E-05 29.7 2.2 27 25-52 205-231 (359)
44 2fyf_A PSAT, phosphoserine ami 67.4 3.2 0.00011 30.5 2.5 29 24-52 210-238 (398)
45 1ax4_A Tryptophanase; tryptoph 66.8 5.6 0.00019 29.7 3.8 27 25-52 255-281 (467)
46 1v72_A Aldolase; PLP-dependent 66.6 3.3 0.00011 29.4 2.4 24 26-50 202-225 (356)
47 2c0r_A PSAT, phosphoserine ami 65.2 5.1 0.00017 28.8 3.2 28 24-52 185-212 (362)
48 3a9z_A Selenocysteine lyase; P 63.8 4.6 0.00016 29.8 2.8 26 26-53 237-262 (432)
49 4eb5_A Probable cysteine desul 59.9 7.5 0.00026 27.7 3.3 26 26-52 189-214 (382)
50 2a7v_A Serine hydroxymethyltra 59.2 6.7 0.00023 30.8 3.1 27 25-52 255-281 (490)
51 2vyc_A Biodegradative arginine 59.0 6.6 0.00022 32.5 3.1 26 27-52 371-402 (755)
52 1wyu_A Glycine dehydrogenase ( 58.5 6.2 0.00021 29.5 2.7 27 25-52 246-277 (438)
53 4hvk_A Probable cysteine desul 55.2 9.4 0.00032 27.0 3.1 27 26-53 189-215 (382)
54 2vi8_A Serine hydroxymethyltra 52.0 12 0.00041 27.0 3.2 27 23-50 213-239 (405)
55 1jg8_A L-ALLO-threonine aldola 51.1 15 0.00052 25.9 3.6 26 26-53 193-218 (347)
56 2fnu_A Aminotransferase; prote 48.7 15 0.00051 26.1 3.3 24 26-51 173-196 (375)
57 3lvm_A Cysteine desulfurase; s 46.2 15 0.00051 26.7 3.0 26 26-52 215-240 (423)
58 1eg5_A Aminotransferase; PLP-d 46.0 15 0.00051 26.1 2.9 26 26-52 193-218 (384)
59 1t3i_A Probable cysteine desul 45.8 11 0.00039 27.1 2.3 24 27-51 222-245 (420)
60 1pff_A Methionine gamma-lyase; 45.8 13 0.00046 26.1 2.6 28 26-53 135-164 (331)
61 3cai_A Possible aminotransfera 44.0 10 0.00036 27.4 1.8 23 27-51 218-241 (406)
62 3pj0_A LMO0305 protein; struct 43.8 24 0.00082 25.0 3.7 28 25-54 197-224 (359)
63 1c4k_A Protein (ornithine deca 42.6 13 0.00044 30.8 2.4 28 26-53 341-372 (730)
64 2cb1_A O-acetyl homoserine sul 41.4 20 0.00068 26.5 3.1 26 26-51 192-218 (412)
65 1gc0_A Methionine gamma-lyase; 41.1 16 0.00053 26.9 2.4 27 26-52 201-229 (398)
66 1w23_A Phosphoserine aminotran 40.7 16 0.00054 25.9 2.3 25 27-52 187-211 (360)
67 3ou5_A Serine hydroxymethyltra 40.0 21 0.00072 28.7 3.2 28 24-52 254-281 (490)
68 1kmj_A Selenocysteine lyase; p 38.6 17 0.00058 26.0 2.2 25 26-51 216-240 (406)
69 2dkj_A Serine hydroxymethyltra 37.3 32 0.0011 24.7 3.6 29 25-54 215-243 (407)
70 1cs1_A CGS, protein (cystathio 37.1 31 0.0011 25.0 3.5 27 26-52 188-216 (386)
71 2rfv_A Methionine gamma-lyase; 36.2 22 0.00075 26.0 2.6 27 26-52 200-228 (398)
72 3vax_A Putative uncharacterize 36.1 23 0.00079 25.4 2.6 25 27-52 211-236 (400)
73 3acz_A Methionine gamma-lyase; 35.8 26 0.00091 25.7 3.0 26 26-51 195-222 (389)
74 1o69_A Aminotransferase; struc 35.3 31 0.0011 25.1 3.3 30 25-55 173-202 (394)
75 2c81_A Glutamine-2-deoxy-scyll 35.1 27 0.00093 25.6 2.9 27 26-53 182-208 (418)
76 3lws_A Aromatic amino acid bet 33.2 47 0.0016 23.4 3.9 28 25-54 195-222 (357)
77 2ez2_A Beta-tyrosinase, tyrosi 32.2 44 0.0015 24.6 3.7 28 26-54 247-274 (456)
78 2ctz_A O-acetyl-L-homoserine s 29.2 40 0.0014 25.0 3.1 25 26-50 196-221 (421)
79 3n0l_A Serine hydroxymethyltra 26.8 68 0.0023 23.0 3.9 29 24-53 215-243 (417)
80 1ibj_A CBL, cystathionine beta 24.7 66 0.0022 24.6 3.6 28 26-53 268-297 (464)
81 1vef_A Acetylornithine/acetyl- 24.6 41 0.0014 24.2 2.3 24 27-52 247-270 (395)
82 3gbx_A Serine hydroxymethyltra 24.5 59 0.002 23.3 3.1 27 24-51 220-246 (420)
83 1e5e_A MGL, methionine gamma-l 24.4 43 0.0015 24.7 2.4 27 26-52 199-227 (404)
84 3n75_A LDC, lysine decarboxyla 23.9 37 0.0013 28.2 2.1 26 27-52 355-383 (715)
85 3uwc_A Nucleotide-sugar aminot 23.9 88 0.003 22.0 4.0 28 27-54 176-205 (374)
86 3qhx_A Cystathionine gamma-syn 22.9 83 0.0028 23.0 3.7 28 26-53 202-231 (392)
87 3nyt_A Aminotransferase WBPE; 20.1 90 0.0031 22.2 3.4 27 28-54 175-203 (367)
No 1
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.67 E-value=3.4e-17 Score=128.67 Aligned_cols=86 Identities=23% Similarity=0.363 Sum_probs=75.7
Q ss_pred CCcccccccCCCCcCCeeeecccccCCCCCCceeEEEeCchHHHHHhhCCCccccccCccCCCcccCCCcccCCCCCcCh
Q psy8011 13 AGGLDHFHQPRQVLADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDV 92 (102)
Q Consensus 13 ~~ef~~~~~~gie~ADSis~D~HK~L~~P~~cg~ll~rd~~~l~~~~~~~a~Yl~~~~~~~~~~~d~~~~tle~SRr~~a 92 (102)
+|+++++. .|++.||||++|+||||++|++||++++|++..+..++...+.|+..... +..+++++|++++||++++
T Consensus 287 ~~~~~~~~-~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~~r~~~~ 363 (481)
T 4e1o_A 287 CPEFRGFL-KGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANS--GVATDFMHWQIPLSRRFRS 363 (481)
T ss_dssp SGGGGGGG-TTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTT--TTSCCGGGGSSSSCCCCTH
T ss_pred ChhhHHHh-cCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCccc--CCCCCcccccccCCCCccH
Confidence 57788888 69999999999999999999999999999998887778888999977543 3456888999999999999
Q ss_pred HHHHHhhhc
Q psy8011 93 LKFWFMWKA 101 (102)
Q Consensus 93 LklW~~lr~ 101 (102)
+++|++|+.
T Consensus 364 l~~~~al~~ 372 (481)
T 4e1o_A 364 VKLWFVIRS 372 (481)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999874
No 2
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.67 E-value=9.6e-17 Score=127.36 Aligned_cols=89 Identities=49% Similarity=0.921 Sum_probs=78.2
Q ss_pred CCCcccccccCCCCcCCeeeecccccCCCCCCceeEEEeCchHHHHHhhCCCccccccCccCCCcccCCCcccCCCCCcC
Q psy8011 12 QAGGLDHFHQPRQVLADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPD 91 (102)
Q Consensus 12 ~~~ef~~~~~~gie~ADSis~D~HK~L~~P~~cg~ll~rd~~~l~~~~~~~a~Yl~~~~~~~~~~~d~~~~tle~SRr~~ 91 (102)
-+|+|++.. .|++.|||+++|+||||++|++||++++|++..+..++...+.|+.+........++++++++++||+++
T Consensus 293 ~~~~~~~~~-~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~ 371 (511)
T 3vp6_A 293 MSRKHRHKL-NGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVD 371 (511)
T ss_dssp GCTTTGGGG-TTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCC
T ss_pred hChhhhhhc-cCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchH
Confidence 357888888 7999999999999999999999999999999888778888999998765433456788899999999999
Q ss_pred hHHHHHhhhc
Q psy8011 92 VLKFWFMWKA 101 (102)
Q Consensus 92 aLklW~~lr~ 101 (102)
++++|++|+.
T Consensus 372 al~~~~al~~ 381 (511)
T 3vp6_A 372 IFKFWLMWKA 381 (511)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999974
No 3
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.64 E-value=8e-17 Score=126.66 Aligned_cols=86 Identities=24% Similarity=0.388 Sum_probs=54.5
Q ss_pred CCcccccccCCCCcCCeeeecccccCCCCCCceeEEEeCchHHHHHhhCCCccccccCccCCCcccCCCcccCCCCCcCh
Q psy8011 13 AGGLDHFHQPRQVLADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDV 92 (102)
Q Consensus 13 ~~ef~~~~~~gie~ADSis~D~HK~L~~P~~cg~ll~rd~~~l~~~~~~~a~Yl~~~~~~~~~~~d~~~~tle~SRr~~a 92 (102)
+|+++++. .|++.||||++|+||||++|++||++++|++..+..++...+.|+.+... +..+++++|++++||++++
T Consensus 280 ~~~~~~~~-~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~sr~~~~ 356 (475)
T 3k40_A 280 CPEYRHLM-KGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQ--GSAPDYRHWQIPLGRRFRA 356 (475)
T ss_dssp SGGGGGGG-TTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC-----------------------------CCCGGGTH
T ss_pred CHhhHHHh-cCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCcC--CCCCCcccccccCCCcccH
Confidence 46778877 69999999999999999999999999999998877778888999976532 2357788999999999999
Q ss_pred HHHHHhhhc
Q psy8011 93 LKFWFMWKA 101 (102)
Q Consensus 93 LklW~~lr~ 101 (102)
+++|++|+.
T Consensus 357 l~l~~al~~ 365 (475)
T 3k40_A 357 LKLWFVLRL 365 (475)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999874
No 4
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.61 E-value=1e-15 Score=120.14 Aligned_cols=88 Identities=49% Similarity=0.912 Sum_probs=73.9
Q ss_pred CCcccccccCCCCcCCeeeecccccCCCCCCceeEEEeCchHHHHHhhCCCccccccCccCCCcccCCCcccCCCCCcCh
Q psy8011 13 AGGLDHFHQPRQVLADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDV 92 (102)
Q Consensus 13 ~~ef~~~~~~gie~ADSis~D~HK~L~~P~~cg~ll~rd~~~l~~~~~~~a~Yl~~~~~~~~~~~d~~~~tle~SRr~~a 92 (102)
+++|++.. .|++.||||++|+|||+++|++||++++|++..+..++...+.|+.......+..++++++++++|||+++
T Consensus 291 ~~~~~~~~-~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~ 369 (504)
T 2okj_A 291 SRKHRHKL-NGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDI 369 (504)
T ss_dssp CTTTGGGG-TTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCH
T ss_pred CHhhHhhc-CCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccH
Confidence 57788877 69999999999999999999999999999987676667788899965432222346788999999999999
Q ss_pred HHHHHhhhc
Q psy8011 93 LKFWFMWKA 101 (102)
Q Consensus 93 LklW~~lr~ 101 (102)
+++|++++.
T Consensus 370 l~~~a~l~~ 378 (504)
T 2okj_A 370 FKFWLMWKA 378 (504)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999874
No 5
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.57 E-value=3.3e-15 Score=117.88 Aligned_cols=89 Identities=53% Similarity=0.960 Sum_probs=66.8
Q ss_pred CCCcccccccCCCCcCCeeeecccccCCCCCCceeEEEeCc-hHHHHHhhCCCccccccCccCCCcccCCCcccCCCCCc
Q psy8011 12 QAGGLDHFHQPRQVLADSVTWNPHKLLTAPQQCSVFLTRHQ-SVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP 90 (102)
Q Consensus 12 ~~~ef~~~~~~gie~ADSis~D~HK~L~~P~~cg~ll~rd~-~~l~~~~~~~a~Yl~~~~~~~~~~~d~~~~tle~SRr~ 90 (102)
..++|++.. .|++.|||+++|+|||+++|++||++++|++ ..+..++...+.|+..........++++.++++++||+
T Consensus 304 ~~~~~~~~~-~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~ 382 (515)
T 2jis_A 304 LSQTHRHLL-DGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRV 382 (515)
T ss_dssp GCTTTGGGG-TTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCC
T ss_pred hChhhHhhc-CCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcc
Confidence 356788877 6999999999999999999999999999998 55666677788999654322223467888999999999
Q ss_pred ChHHHHHhhhc
Q psy8011 91 DVLKFWFMWKA 101 (102)
Q Consensus 91 ~aLklW~~lr~ 101 (102)
+++++|++++.
T Consensus 383 ~al~~~~~l~~ 393 (515)
T 2jis_A 383 DCLKLWLMWKA 393 (515)
T ss_dssp CHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 99999999874
No 6
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.54 E-value=5e-15 Score=115.42 Aligned_cols=88 Identities=25% Similarity=0.401 Sum_probs=65.0
Q ss_pred CCcccccccCCCCcCCeeeecccccCCCCCCceeEEEeCchHHHHHhhCCCccccccCccCCCcccCCCcccCCCCCcCh
Q psy8011 13 AGGLDHFHQPRQVLADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDV 92 (102)
Q Consensus 13 ~~ef~~~~~~gie~ADSis~D~HK~L~~P~~cg~ll~rd~~~l~~~~~~~a~Yl~~~~~~~~~~~d~~~~tle~SRr~~a 92 (102)
.|+++++. .|++.||||++|+|||+++|++||++++|++..+.+.+...+.|+.......+...++.++++++|||+++
T Consensus 281 ~~~~~~~~-~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~ 359 (486)
T 1js3_A 281 CPEFRHLL-NGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRS 359 (486)
T ss_dssp STTTGGGG-TTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTH
T ss_pred CHHHHHHh-cCccccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhH
Confidence 46788877 68999999999999999999999999999987666677777889866432112346677899999999999
Q ss_pred HHHHHhhhc
Q psy8011 93 LKFWFMWKA 101 (102)
Q Consensus 93 LklW~~lr~ 101 (102)
+++|.+++.
T Consensus 360 ~~~~~al~~ 368 (486)
T 1js3_A 360 LKMWFVFRM 368 (486)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999874
No 7
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.47 E-value=4.4e-14 Score=110.67 Aligned_cols=81 Identities=21% Similarity=0.231 Sum_probs=54.1
Q ss_pred ccccccCCCCcCCeeeecccccCCCCCCceeEEEeCchHHHHHhhCCCccccccCccCCCcccCCCcccCCCCCcChHHH
Q psy8011 16 LDHFHQPRQVLADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKF 95 (102)
Q Consensus 16 f~~~~~~gie~ADSis~D~HK~L~~P~~cg~ll~rd~~~l~~~~~~~a~Yl~~~~~~~~~~~d~~~~tle~SRr~~aLkl 95 (102)
|++.. .|++.+|||++|+|||+++|++||++++|++..+ ..+...+.|+..... ...++..+++++||+++++++
T Consensus 306 ~~~~~-~gi~~~D~i~~s~hK~l~~p~~~G~l~~~~~~~~-~~~~~~~~yl~~~~~---~~~~~~~~~~~~~r~~~al~~ 380 (497)
T 2qma_A 306 HKSRL-KGVERAHSISVDFHKLFYQTISCGALLVNDKSNF-KFLLHHADYLNREHD---ELPNLVDKSIATTKRFDALKV 380 (497)
T ss_dssp TGGGG-TTGGGCSEEEEETTTTTCCCSSCEEEEESCGGGG-GGGCC-----------------------CCSCCCTHHHH
T ss_pred chHhh-cCcccCCEEEEcchhccCCCcceEEEEEeCHHHH-HHhcCCchhcCCccc---cCCCccccCCCCCCchhHHHH
Confidence 66666 6999999999999999999999999999998755 456666788865321 235677899999999999999
Q ss_pred HHhhhc
Q psy8011 96 WFMWKA 101 (102)
Q Consensus 96 W~~lr~ 101 (102)
|++++.
T Consensus 381 ~~~l~~ 386 (497)
T 2qma_A 381 FMTMQN 386 (497)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=98.69 E-value=6.2e-09 Score=80.23 Aligned_cols=70 Identities=21% Similarity=0.281 Sum_probs=55.2
Q ss_pred CCCcCCeeeecccccCCCCCCceeEEEeCchHHHHHhhCCCccccccCccCCCcccCCCcccCCCCCc-ChHHHHHhhhc
Q psy8011 23 RQVLADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP-DVLKFWFMWKA 101 (102)
Q Consensus 23 gie~ADSis~D~HK~L~~P~~cg~ll~rd~~~l~~~~~~~a~Yl~~~~~~~~~~~d~~~~tle~SRr~-~aLklW~~lr~ 101 (102)
.++.+||+++++|||++.|..||++++|++..+...+...+.|+... ..+++++++|++ .++++|.+++.
T Consensus 249 ~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~r~~~~~~~~~aal~~ 319 (452)
T 2dgk_A 249 RLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQ---------IGTFAINFSRPAGQVIAQYYEFLR 319 (452)
T ss_dssp TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCC---------EEECCSCCSCBCHHHHHHHHHHHH
T ss_pred CCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCC---------CCCcccCCCChhHHHHHHHHHHHH
Confidence 37789999999999999999999999998765534555556676421 235678999998 89999998863
No 9
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=98.59 E-value=2.1e-08 Score=79.16 Aligned_cols=70 Identities=16% Similarity=0.115 Sum_probs=57.8
Q ss_pred CCCcCCeeeecccccCCCCCCceeEEEeCchHHHHHhhCCCccccccCccCCCcccCCCcccCCCCCc-ChHHHHHhhhc
Q psy8011 23 RQVLADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP-DVLKFWFMWKA 101 (102)
Q Consensus 23 gie~ADSis~D~HK~L~~P~~cg~ll~rd~~~l~~~~~~~a~Yl~~~~~~~~~~~d~~~~tle~SRr~-~aLklW~~lr~ 101 (102)
+++.+||+++++|||++.|.+||+++++++..+...+...+.|+.... ..+++++||+. .++++|.+++.
T Consensus 264 ~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~---------~~~~~~~sr~~~~~~a~~~al~~ 334 (502)
T 3hbx_A 264 RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQ---------PTFTLNFSKGSSQVIAQYYQLIR 334 (502)
T ss_dssp TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCE---------EECCSCCSCBSHHHHHHHHHHHH
T ss_pred CCCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCC---------CCccccCCchHHHHHHHHHHHHH
Confidence 478999999999999999999999999998776566666778876532 25778899986 89999998863
No 10
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=98.22 E-value=1.9e-07 Score=74.29 Aligned_cols=43 Identities=12% Similarity=0.086 Sum_probs=35.4
Q ss_pred ccccccCCC--CcCCeeeecccccCCCCCCceeEEEeCchHHHHH
Q psy8011 16 LDHFHQPRQ--VLADSVTWNPHKLLTAPQQCSVFLTRHQSVLTEC 58 (102)
Q Consensus 16 f~~~~~~gi--e~ADSis~D~HK~L~~P~~cg~ll~rd~~~l~~~ 58 (102)
+.++.+.++ ++||++++|+||||.+|++|+++++||+..+...
T Consensus 244 ~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~ 288 (450)
T 3bc8_A 244 CMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDI 288 (450)
T ss_dssp HHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHH
T ss_pred hHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHH
Confidence 444444466 8899999999999999999999999998776544
No 11
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=97.45 E-value=7.2e-05 Score=60.41 Aligned_cols=54 Identities=13% Similarity=0.090 Sum_probs=41.8
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCchHHHHHhhCCCccccccCccCCCcccCCCcccCCCC-CcChHHHHHhhhc
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGR-KPDVLKFWFMWKA 101 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~~~l~~~~~~~a~Yl~~~~~~~~~~~d~~~~tle~SR-r~~aLklW~~lr~ 101 (102)
+||.++.++||++++|++++++++||+..+.... ..|. +.+ .+.++++|++++.
T Consensus 274 rAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~---~~yP-------------------Gr~S~Spsldl~~tLL~ 328 (501)
T 3hl2_A 274 RIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEIS---KMYP-------------------GRASASPSLDVLITLLS 328 (501)
T ss_dssp CCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHHH---HTSC-------------------SCBCSHHHHHHHHHHHH
T ss_pred CCcEEEecccccceeecCceEEEeCCHHHHHHHH---HhCC-------------------CCCCCcHHHHHHHHHHH
Confidence 5999999999999999999999999987664431 1221 222 4789999999874
No 12
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=97.33 E-value=0.00022 Score=55.08 Aligned_cols=67 Identities=18% Similarity=0.167 Sum_probs=42.9
Q ss_pred CcCCeeeecccccCCCCCCceeEEEeCchHHHHHhhCCCccccccCccCCCcccCCCcccCCCCCc-ChHHHHHhhh
Q psy8011 25 VLADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP-DVLKFWFMWK 100 (102)
Q Consensus 25 e~ADSis~D~HK~L~~P~~cg~ll~rd~~~l~~~~~~~a~Yl~~~~~~~~~~~d~~~~tle~SRr~-~aLklW~~lr 100 (102)
..+|+++.++||+++.|.+||+++++++......+.....|+.. .++..++.++|.. ..+.+|.+++
T Consensus 269 ~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~~a~~aal~ 336 (497)
T 3mc6_A 269 PGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGG---------LYGSPTLAGSRPGAIVVGCWATMV 336 (497)
T ss_dssp TTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTS---------CBCCSSSCSSCBHHHHHHHHHHHH
T ss_pred CCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCC---------CcCCcCcccCCcchhHHHHHHHHH
Confidence 44799999999999999999999999875432111112222211 1245566666552 3455888775
No 13
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=96.97 E-value=0.00055 Score=53.35 Aligned_cols=67 Identities=18% Similarity=0.029 Sum_probs=44.5
Q ss_pred CcCCeeeecccccCCCCCCceeEEEeCchHHHHHhhCCCccccccCccCCCcccCCCcccCCCCCcC-hHHHHHhhh
Q psy8011 25 VLADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPD-VLKFWFMWK 100 (102)
Q Consensus 25 e~ADSis~D~HK~L~~P~~cg~ll~rd~~~l~~~~~~~a~Yl~~~~~~~~~~~d~~~~tle~SRr~~-aLklW~~lr 100 (102)
..+|+++.++||+++.|++||+++++++......+.....|... .....++.++|... .+.+|.+++
T Consensus 301 ~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~gs~~~~~~~a~~aal~ 368 (514)
T 3mad_A 301 EGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGG---------LYFSPTFAGSRPGALSATAWAAML 368 (514)
T ss_dssp TTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTC---------SEEESSSCSSCCHHHHHHHHHHHH
T ss_pred CCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCC---------cccCCccCCCCchHHHHHHHHHHH
Confidence 45699999999999999999999999876432111111111110 12235667888854 688998875
No 14
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=95.96 E-value=0.0028 Score=48.80 Aligned_cols=30 Identities=17% Similarity=0.208 Sum_probs=27.4
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCchHH
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQSVL 55 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~~~l 55 (102)
.+|++++++|||++.|.+||++++|++..+
T Consensus 288 ~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~ 317 (456)
T 2z67_A 288 RVDAVVSSSDKNLLTPIGGGLVYSTDAEFI 317 (456)
T ss_dssp CCSEEEEEHHHHHCCCSSCEEEEESCHHHH
T ss_pred CCCEEEEcCCCCcCCCCCeEEEEEcCHHHH
Confidence 799999999999999999999999887654
No 15
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=94.71 E-value=0.027 Score=40.87 Aligned_cols=64 Identities=20% Similarity=0.187 Sum_probs=43.2
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCchHHHHHhhCCCccccccCccCCCcccCCCcccCCCCC-cChHHHHHhhh
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK-PDVLKFWFMWK 100 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~~~l~~~~~~~a~Yl~~~~~~~~~~~d~~~~tle~SRr-~~aLklW~~lr 100 (102)
.+|+++.++||++..|..+|.++++++... ..+.....|+.... ..++.++|. ...+.+|.+++
T Consensus 236 ~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~a~~~ 300 (397)
T 3f9t_A 236 GVDSITIDPHKMGHCPIPSGGILFKDIGYK-RYLDVDAPYLTETR----------QATILGTRVGFGGACTYAVLR 300 (397)
T ss_dssp TCSEEECCTTTTTCCCSSCEEEEESSGGGG-GGTCEECTTSSSSE----------ECSSCSSCCSHHHHHHHHHHH
T ss_pred cCCeEEEccccccCCCCCceEEEEeCHHHH-HhhccCCccccCCC----------ccccccccccchHHHHHHHHH
Confidence 689999999999999999999999887643 33333345553321 234456665 35666666654
No 16
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=87.34 E-value=0.28 Score=37.21 Aligned_cols=30 Identities=10% Similarity=-0.149 Sum_probs=25.6
Q ss_pred CCCcCCeeeecccccCCCCCCceeEEEeCch
Q psy8011 23 RQVLADSVTWNPHKLLTAPQQCSVFLTRHQS 53 (102)
Q Consensus 23 gie~ADSis~D~HK~L~~P~~cg~ll~rd~~ 53 (102)
.++..|-++..+|||++ |.+.|++++|+..
T Consensus 181 d~~~~d~~~~s~~K~~g-p~G~g~l~~~~~~ 210 (361)
T 3m5u_A 181 DFSNIALFYGGVQKNAG-ISGLSCIFIRKDM 210 (361)
T ss_dssp CCTTEEEEEEETTTTSS-CTTCEEEEEEHHH
T ss_pred CcccCCEEEEechhccC-CCccEEEEEcHHH
Confidence 35567999999999997 9999999998753
No 17
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=86.70 E-value=0.37 Score=37.01 Aligned_cols=27 Identities=26% Similarity=0.233 Sum_probs=24.2
Q ss_pred cCCeeeecccccCCCCC-----CceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQ-----QCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~-----~cg~ll~rd~ 52 (102)
.+|.++.++||++..|+ .+|.+++++.
T Consensus 256 g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~ 287 (474)
T 1wyu_B 256 GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH 287 (474)
T ss_dssp TCSEEECCTTTTTCCCCTTSCCCCCCEEECGG
T ss_pred CCcEEEEeCccccccCCCCCCCCeEEEEEcHH
Confidence 48999999999999997 6999999875
No 18
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=83.26 E-value=0.63 Score=33.00 Aligned_cols=26 Identities=19% Similarity=0.170 Sum_probs=23.2
Q ss_pred CCeeeecccccCCCCCCceeEEEeCc
Q psy8011 27 ADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 27 ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
+|.++.++||+++.|.++|.+++++.
T Consensus 177 ~d~~~~s~~K~~~~~~g~G~~~~~~~ 202 (353)
T 2yrr_A 177 VDYAFTGSQKCLSAPPGLAPIAASLE 202 (353)
T ss_dssp CSEEECCTTSTTCCCSSCEEEEECHH
T ss_pred ceEEEecCcccccCCCceEEEEECHH
Confidence 69999999999999999999988764
No 19
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=82.04 E-value=0.7 Score=32.91 Aligned_cols=27 Identities=15% Similarity=0.086 Sum_probs=23.8
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
.+|.++.++||+++.|.++|.+++++.
T Consensus 175 ~~d~~~~s~~K~~~~~~g~G~~~~~~~ 201 (352)
T 1iug_A 175 GVDAAASGSQKGLMCPPGLGFVALSPR 201 (352)
T ss_dssp TCSEEEEESSSTTCCCSCEEEEEECHH
T ss_pred CeeEEEecCcccccCCCceeEEEECHH
Confidence 479999999999999999999998654
No 20
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=81.72 E-value=0.7 Score=33.74 Aligned_cols=27 Identities=22% Similarity=0.143 Sum_probs=23.9
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
.+|.++.++||+++.|.++|++++++.
T Consensus 190 ~~d~~~~s~~K~l~~~~g~g~~~~~~~ 216 (411)
T 3nnk_A 190 GLDAVSAGMQKCLGGPSGTSPITLSAR 216 (411)
T ss_dssp TCSEEECCSTTTTCCCSSEEEEEECHH
T ss_pred CCcEEEecCccccCCCCceEEEEECHH
Confidence 479999999999999999999888654
No 21
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=81.58 E-value=0.74 Score=33.22 Aligned_cols=27 Identities=22% Similarity=0.154 Sum_probs=23.6
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
.+|.++.++||+++.|.++|.+++++.
T Consensus 191 ~~d~~~~s~~K~~~~~~G~G~~~~~~~ 217 (385)
T 2bkw_A 191 GVDFALTASQKAIGAPAGLSISLCSSR 217 (385)
T ss_dssp TCSEEEEESSSTTCCCSCEEEEEECHH
T ss_pred CceEEEecCccccccCCcceEEEEcHH
Confidence 379999999999999989999888764
No 22
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=80.94 E-value=0.78 Score=33.55 Aligned_cols=27 Identities=15% Similarity=0.157 Sum_probs=24.0
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
.+|.++.++||+++.|.++|.+++++.
T Consensus 188 ~~d~~~~s~~K~l~g~~g~g~~~~~~~ 214 (416)
T 3isl_A 188 KIDAAIGGTQKCLSVPSGMAPITYNER 214 (416)
T ss_dssp TCSEEECCSSSTTCCCSSEEEEEECHH
T ss_pred CCCEEEecCccccCCCCCeEEEEECHH
Confidence 479999999999999999999888664
No 23
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=80.53 E-value=1 Score=34.36 Aligned_cols=28 Identities=11% Similarity=0.122 Sum_probs=22.4
Q ss_pred CcCCeeeecccccCCCCCCceeEEEeCch
Q psy8011 25 VLADSVTWNPHKLLTAPQQCSVFLTRHQS 53 (102)
Q Consensus 25 e~ADSis~D~HK~L~~P~~cg~ll~rd~~ 53 (102)
+..|=++..+|||++ |.+.|+|++|+..
T Consensus 211 ~~~~~~~~s~hK~lG-P~G~g~l~v~~~~ 238 (386)
T 3qm2_A 211 SRYGVIYAGAQKNIG-PAGLTLVIVREDL 238 (386)
T ss_dssp GGCSEEEEETTTTTC-CTTEEEEEEEGGG
T ss_pred cccCEEEEecccccC-CCccEEEEECHHH
Confidence 333456789999997 9999999998753
No 24
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=78.53 E-value=1.2 Score=32.15 Aligned_cols=27 Identities=15% Similarity=0.048 Sum_probs=23.9
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
.+|.++.++||++..|.++|.+++++.
T Consensus 198 ~~di~~~s~sK~~~~~~g~G~~~~~~~ 224 (386)
T 2dr1_A 198 GLDVVFSSSQKAFGVPPGLAIGAFSER 224 (386)
T ss_dssp TCSEEEEETTSTTCCCSSCEEEEECHH
T ss_pred CCcEEEEeccccccCCCceEEEEECHH
Confidence 479999999999999989999998753
No 25
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=78.36 E-value=1.1 Score=34.32 Aligned_cols=26 Identities=35% Similarity=0.271 Sum_probs=24.0
Q ss_pred CCeeeecccccCCCCCCceeEEEeCc
Q psy8011 27 ADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 27 ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
+|.++.++||+++.+.++|.+++++.
T Consensus 202 ~Di~~~S~~K~l~~~~g~g~l~~~~~ 227 (446)
T 2x3l_A 202 ADYVVQSFHKTLPALTMGSVLYIHKN 227 (446)
T ss_dssp CSEEEECHHHHSSSCTTCEEEEEETT
T ss_pred CCEEEECCccccccccccEEEEEcCC
Confidence 79999999999999999999999875
No 26
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=76.54 E-value=1.9 Score=30.62 Aligned_cols=29 Identities=21% Similarity=0.275 Sum_probs=24.4
Q ss_pred CCcCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 24 QVLADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 24 ie~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
+..+|.++.++||++..|.++|++++++.
T Consensus 179 ~~~~d~~~~s~~K~~~~~~G~g~~~~~~~ 207 (362)
T 3ffr_A 179 WTKIDSVFFSVQKCFGLPAGLGVWILNDR 207 (362)
T ss_dssp TTSCSEEEEETTSTTCCCSCCEEEEEEHH
T ss_pred hhHCcEEEEecccccCCCCceEEEEECHH
Confidence 34489999999999998999999888654
No 27
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=76.31 E-value=1.6 Score=31.70 Aligned_cols=26 Identities=27% Similarity=0.307 Sum_probs=23.1
Q ss_pred CCeeeecccccCCCCCCceeEEEeCc
Q psy8011 27 ADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 27 ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
+|.++.++||+++.|.++|.+++++.
T Consensus 187 ~d~~~~s~sK~~~~~~g~G~l~~~~~ 212 (392)
T 2z9v_A 187 ADIYVTGPNKCLGAPPGLTMMGVSER 212 (392)
T ss_dssp CSEEEECSSSTTCCCSCCEEEEECHH
T ss_pred ceEEEecCcccccCCCceeEEEECHH
Confidence 79999999999999999999988653
No 28
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=76.25 E-value=1.6 Score=31.04 Aligned_cols=27 Identities=15% Similarity=0.176 Sum_probs=23.5
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
.+|.++.++||+++.|.++|.+++++.
T Consensus 183 ~~di~~~s~~K~~~~~~g~G~~~~~~~ 209 (366)
T 1m32_A 183 HIDYLISSANKCIQGVPGFAFVIAREQ 209 (366)
T ss_dssp TCSEEEEESSSTTCCCSSEEEEEEEHH
T ss_pred CccEEEecCcccccCCCceEEEEECHH
Confidence 379999999999999999999998763
No 29
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=75.92 E-value=1.9 Score=32.87 Aligned_cols=28 Identities=11% Similarity=0.058 Sum_probs=22.8
Q ss_pred CcCCeeeecccccCCCCCCceeEEEeCch
Q psy8011 25 VLADSVTWNPHKLLTAPQQCSVFLTRHQS 53 (102)
Q Consensus 25 e~ADSis~D~HK~L~~P~~cg~ll~rd~~ 53 (102)
+..|=++..+|||++ |.+.|++++|+..
T Consensus 196 ~~~~~~~~s~~K~~g-p~G~g~l~~~~~~ 223 (377)
T 3e77_A 196 SKFGVIFAGAQKNVG-SAGVTVVIVRDDL 223 (377)
T ss_dssp GGCSEEEEEGGGTTS-CTTCEEEEEETTS
T ss_pred hhcCEEEEecccccC-CCccEEEEEcHHH
Confidence 334457899999996 9999999998764
No 30
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=75.71 E-value=2 Score=30.89 Aligned_cols=27 Identities=15% Similarity=0.233 Sum_probs=23.9
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
.+|.++.++|||++.|.++|.+++++.
T Consensus 210 ~~d~~~~s~~K~~~~~~g~G~~~~~~~ 236 (390)
T 1elu_A 210 EVDYYAFTGHKWFAGPAGVGGLYIHGD 236 (390)
T ss_dssp CCSEEEEESSSTTCCCTTCEEEEECTT
T ss_pred CCCEEEccccccccCCCceEEEEECHH
Confidence 468999999999999999999999753
No 31
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=75.54 E-value=1.5 Score=31.45 Aligned_cols=27 Identities=15% Similarity=0.087 Sum_probs=23.8
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
.+|.++.++||+++.|.++|.+++++.
T Consensus 179 ~~d~~~~s~~K~~~~~~g~g~~~~~~~ 205 (384)
T 3zrp_A 179 NVDVYLTASQKALGSAAGLGLLLLSPK 205 (384)
T ss_dssp TCSEEEEETTSTTCCCSSEEEEEECHH
T ss_pred CCCEEEecCcccccCCCceEEEEECHH
Confidence 479999999999998999999988664
No 32
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=74.61 E-value=1.7 Score=31.51 Aligned_cols=26 Identities=23% Similarity=0.224 Sum_probs=22.8
Q ss_pred cCCeeeecccccCCCCCCceeEEEeC
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRH 51 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd 51 (102)
.+|.++.++||+++.|.++|.+++++
T Consensus 196 ~~d~~~~s~sK~l~g~~G~G~~~~~~ 221 (393)
T 2huf_A 196 EIDAMYTGSQKVLGAPPGITPVSFSH 221 (393)
T ss_dssp TCSEEECCSSSTTCCCSSCEEEEECH
T ss_pred CccEEEECCCcccccCCCeEEEEECH
Confidence 37999999999999899999988863
No 33
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=74.51 E-value=1.7 Score=31.95 Aligned_cols=27 Identities=11% Similarity=0.079 Sum_probs=24.1
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
.+|-++...||+++.|.++|++++++.
T Consensus 189 ~~d~~~~s~~K~l~~~~g~g~~~~~~~ 215 (379)
T 3ke3_A 189 GIDVLISAPQKGWSSTPCAGLVMLSAA 215 (379)
T ss_dssp TCSEEEECTTTTTCSCCCEEEEEECHH
T ss_pred CCCEEEecchhhcCCCCceEEEEECHH
Confidence 479999999999999999999988764
No 34
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=74.12 E-value=1.9 Score=31.36 Aligned_cols=27 Identities=19% Similarity=0.021 Sum_probs=23.8
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
.+|.++.++||+++.|..+|.+++++.
T Consensus 211 ~~di~~~s~sK~l~~~~~~G~l~~~~~ 237 (393)
T 1vjo_A 211 GVDLAYSCSQKGLGCSPGASPFTMSSR 237 (393)
T ss_dssp TCSEEECCSSSTTCSCSSCEEEEECHH
T ss_pred CccEEEEcCcccccCCCceEEEEECHH
Confidence 469999999999999999999998754
No 35
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=73.94 E-value=1.5 Score=31.41 Aligned_cols=26 Identities=23% Similarity=0.244 Sum_probs=23.6
Q ss_pred CCeeeecccccCCCCCCceeEEEeCc
Q psy8011 27 ADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 27 ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
+|.++.++||+++.|..+|.+++++.
T Consensus 200 ~di~~~s~sK~~~~~~~~G~~~~~~~ 225 (371)
T 2e7j_A 200 ADFIVGSGHKSMAASGPIGVMGMKEE 225 (371)
T ss_dssp CSEEEEEHHHHSSCCSSCEEEEECTT
T ss_pred CCEEEecCCcCCCCCCCcEEEEEech
Confidence 68999999999999999999999765
No 36
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=72.26 E-value=2.2 Score=30.64 Aligned_cols=27 Identities=22% Similarity=0.208 Sum_probs=23.6
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
.+|.++.++||+++.|.++|.+++++.
T Consensus 200 ~~d~~~~s~sK~~~~~~g~g~~~~~~~ 226 (393)
T 3kgw_A 200 GIDIMYSSSQKVLNAPPGISLISFNDK 226 (393)
T ss_dssp TCCEEEEESSSTTCCCSSCEEEEECHH
T ss_pred CCCEEEecCcccccCCCceeEEEECHH
Confidence 469999999999999999999988654
No 37
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=72.08 E-value=2.8 Score=30.66 Aligned_cols=26 Identities=19% Similarity=0.057 Sum_probs=22.9
Q ss_pred CCeeeecccccCCCCCCc-eeEEEeCc
Q psy8011 27 ADSVTWNPHKLLTAPQQC-SVFLTRHQ 52 (102)
Q Consensus 27 ADSis~D~HK~L~~P~~c-g~ll~rd~ 52 (102)
+|.++.++||+++.+..+ |++++++.
T Consensus 218 ~d~~~~s~~K~l~~g~~~~g~l~~~~~ 244 (416)
T 1qz9_A 218 ADYAIGCTYKYLNGGPGSQAFVWVSPQ 244 (416)
T ss_dssp CSEEEECSSSTTCCCTTCCCEEEECTT
T ss_pred CCEEEecCcccCCCCCCCeEEEEECHH
Confidence 799999999999888888 99988765
No 38
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=71.21 E-value=2.9 Score=32.20 Aligned_cols=27 Identities=22% Similarity=0.210 Sum_probs=23.7
Q ss_pred CcCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 25 VLADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 25 e~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
+.+|-++..+||+|.-|.+ |++++++.
T Consensus 245 ~~~div~~s~~K~l~Gprg-G~i~~~~~ 271 (483)
T 1rv3_A 245 EHCHVVTTTTHKTLRGCRA-GMIFYRRG 271 (483)
T ss_dssp GTCSEEEEESSGGGCCCSC-EEEEEECS
T ss_pred CCCcEEEecCcccCCCCCc-eEEEEcch
Confidence 3689999999999988988 99999875
No 39
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=69.93 E-value=2.6 Score=30.31 Aligned_cols=26 Identities=27% Similarity=0.359 Sum_probs=22.7
Q ss_pred CCeeeecccccCCCCCCceeEEEeCc
Q psy8011 27 ADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 27 ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
+|.++..+||++..|.++|++++++.
T Consensus 197 ~d~~~~s~~K~l~~~~G~g~~~~~~~ 222 (376)
T 3f0h_A 197 ADVMITGSQKVLACPPGISVIVLAPR 222 (376)
T ss_dssp CSEEEEETTTTTCCCSSCEEEEECHH
T ss_pred ccEEEecCcccccCCCceEEEEECHH
Confidence 68999999999998889999877654
No 40
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=68.99 E-value=3.5 Score=31.09 Aligned_cols=27 Identities=15% Similarity=0.158 Sum_probs=22.9
Q ss_pred cCCeeeecccccCC-CCCCceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLT-APQQCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~-~P~~cg~ll~rd~ 52 (102)
.+|.+++++||+++ .|.++|.+++++.
T Consensus 266 ~~D~~~~s~~K~l~~gp~~~g~l~~~~~ 293 (465)
T 3e9k_A 266 GVDFACWCSYKYLNAGAGGIAGAFIHEK 293 (465)
T ss_dssp TCCEEEECSSSTTCCCTTCCCEEEECGG
T ss_pred CCCEEEECcccccccCCCceEEEEEcHH
Confidence 47999999999995 7888999988654
No 41
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=68.57 E-value=2.9 Score=30.28 Aligned_cols=25 Identities=24% Similarity=0.231 Sum_probs=21.3
Q ss_pred CCeeeecccccCCCCCCceeEEEeC
Q psy8011 27 ADSVTWNPHKLLTAPQQCSVFLTRH 51 (102)
Q Consensus 27 ADSis~D~HK~L~~P~~cg~ll~rd 51 (102)
+|.++.++||+++.|.++|++++++
T Consensus 196 ~d~~~~s~~K~~~~~~g~g~~~~~~ 220 (396)
T 2ch1_A 196 IDAVYTGAQKVLGAPPGITPISISP 220 (396)
T ss_dssp CCEEECCCC-CCCCCSSCEEEEECH
T ss_pred cCEEEEcCCccccCCCCeEEEEECH
Confidence 6888999999999999999888866
No 42
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=68.45 E-value=3.6 Score=30.74 Aligned_cols=27 Identities=15% Similarity=0.204 Sum_probs=20.7
Q ss_pred CcCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 25 VLADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 25 e~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
+.+|.+++.+||++..|.+ |++..++.
T Consensus 255 ~~~d~~~~s~sK~~g~~~G-g~~~~~~~ 281 (467)
T 2oqx_A 255 KYADMLAMSAKKDAMVPMG-GLLCMKDD 281 (467)
T ss_dssp GGCSEEEEESSSTTCCSSC-EEEEECSG
T ss_pred ccCCeEEEecccccCCCCc-eEEEecCh
Confidence 5689999999999998854 55555554
No 43
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=68.24 E-value=2.8 Score=29.74 Aligned_cols=27 Identities=11% Similarity=-0.045 Sum_probs=21.6
Q ss_pred CcCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 25 VLADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 25 e~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
..+|++++.+||+++ |.++|++++++.
T Consensus 205 ~~~d~~~~s~~K~g~-~~~~g~l~~~~~ 231 (359)
T 1svv_A 205 RLTDMFYIGATKAGG-MFGEALIILNDA 231 (359)
T ss_dssp HHCSEEEEECTTTTC-SSCEEEEECSGG
T ss_pred hcCCEEEEecccCCC-CCceEEEEEccc
Confidence 367999999999865 788898887543
No 44
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=67.41 E-value=3.2 Score=30.51 Aligned_cols=29 Identities=10% Similarity=0.088 Sum_probs=23.6
Q ss_pred CCcCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 24 QVLADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 24 ie~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
++.+|.++..+||++..|-.+|.+++++.
T Consensus 210 ~~~~di~~~s~sK~~~~~gg~g~l~~~~~ 238 (398)
T 2fyf_A 210 IAETDAYYFAPQKNFASDGGLWLAIMSPA 238 (398)
T ss_dssp GGGCSEEEECTTSTTCSCSSEEEEEECHH
T ss_pred cccCcEEEEecCcccCCCCceEEEEECHH
Confidence 44589999999999999966888877653
No 45
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=66.76 E-value=5.6 Score=29.69 Aligned_cols=27 Identities=19% Similarity=0.107 Sum_probs=20.4
Q ss_pred CcCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 25 VLADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 25 e~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
+.+|.++..+||++..|.+ |++..+|+
T Consensus 255 ~~~d~~~~s~sK~~g~~~G-g~~~~~d~ 281 (467)
T 1ax4_A 255 KYADALTMSAKKDPLLNIG-GLVAIRDN 281 (467)
T ss_dssp GGCSEEEEETTSTTCCSSC-EEEEESSC
T ss_pred cccceEEEeccccCCCCcc-eEEEeCCH
Confidence 4689999999999998844 55555645
No 46
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=66.57 E-value=3.3 Score=29.37 Aligned_cols=24 Identities=13% Similarity=0.123 Sum_probs=20.1
Q ss_pred cCCeeeecccccCCCCCCceeEEEe
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTR 50 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~r 50 (102)
.+|.+++.+||+ +.|.++|+++.+
T Consensus 202 ~~d~~~~s~sK~-g~~~G~g~~~~~ 225 (356)
T 1v72_A 202 GVDALSFGATKN-GVLAAEAIVLFN 225 (356)
T ss_dssp TCCEEEECCGGG-TCSSCEEEEESS
T ss_pred cCCEEEEecccC-CCcCccEEEEEC
Confidence 789999999999 568888887763
No 47
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=65.22 E-value=5.1 Score=28.78 Aligned_cols=28 Identities=21% Similarity=0.166 Sum_probs=22.7
Q ss_pred CCcCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 24 QVLADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 24 ie~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
++..|-++..+||++. |.++|.+++++.
T Consensus 185 ~~~~d~~~~s~~K~~g-~~G~G~l~~~~~ 212 (362)
T 2c0r_A 185 LNQFGLVYAGAQKNLG-PSGVTVVIVRED 212 (362)
T ss_dssp GGGCSEEEEETTTTTC-CSSCEEEEEEGG
T ss_pred hhHCcEEEEecccccc-CcCcEEEEEcHH
Confidence 4445999999999997 778999888754
No 48
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=63.80 E-value=4.6 Score=29.78 Aligned_cols=26 Identities=23% Similarity=0.247 Sum_probs=21.5
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCch
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQS 53 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~~ 53 (102)
.+|.++.++||+++ |. +|.+++++..
T Consensus 237 ~~d~~~~s~~K~~g-~~-~G~~~~~~~~ 262 (432)
T 3a9z_A 237 GVDFLTIVGHKFYG-PR-IGALYVRGVG 262 (432)
T ss_dssp CCSEEEEEGGGTTC-CS-CEEEEETTBT
T ss_pred CCCEEEEehhHhcC-Cc-ceEEEEcccc
Confidence 47999999999876 66 9999998653
No 49
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=59.94 E-value=7.5 Score=27.73 Aligned_cols=26 Identities=19% Similarity=0.316 Sum_probs=21.5
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
.+|.++.++||+ +.|.++|.+++++.
T Consensus 189 ~~di~~~s~sK~-~g~~g~G~~~~~~~ 214 (382)
T 4eb5_A 189 GADMLTISSNDI-YGPKGVGALWIRKE 214 (382)
T ss_dssp TCSEEEEETGGG-TCCSSCEEEEEETT
T ss_pred CCCEEEeehHHh-cCCCceEEEEEccc
Confidence 479999999998 55778999999875
No 50
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=59.15 E-value=6.7 Score=30.84 Aligned_cols=27 Identities=30% Similarity=0.329 Sum_probs=22.5
Q ss_pred CcCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 25 VLADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 25 e~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
+.+|.++..+||.|.-|.+ |+++.++.
T Consensus 255 ~~aDiv~~S~hK~l~Gp~G-G~i~~~~~ 281 (490)
T 2a7v_A 255 KHADIVTTTTHKTLRGARS-GLIFYRKG 281 (490)
T ss_dssp GTCSEEEEESSGGGCSCSC-EEEEEECS
T ss_pred CCCCEEEECCcccCccccc-hheeeccc
Confidence 4689999999999988865 88888764
No 51
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=58.99 E-value=6.6 Score=32.52 Aligned_cols=26 Identities=38% Similarity=0.428 Sum_probs=23.5
Q ss_pred CCe------eeecccccCCCCCCceeEEEeCc
Q psy8011 27 ADS------VTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 27 ADS------is~D~HK~L~~P~~cg~ll~rd~ 52 (102)
+|. ++.++||+|..|-.+|++++++.
T Consensus 371 aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~ 402 (755)
T 2vyc_A 371 GDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_dssp CCCSSBEEEEEEETTTSSSCCTTCEEEEEECC
T ss_pred CCccCCCeEEEECccccccCcCCeeeeeecCc
Confidence 788 99999999999999999999876
No 52
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=58.54 E-value=6.2 Score=29.55 Aligned_cols=27 Identities=15% Similarity=0.122 Sum_probs=22.0
Q ss_pred CcCCeeeecccc-----cCCCCCCceeEEEeCc
Q psy8011 25 VLADSVTWNPHK-----LLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 25 e~ADSis~D~HK-----~L~~P~~cg~ll~rd~ 52 (102)
..+|.++.+.|| |++.| .+|++++++.
T Consensus 246 ~g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~ 277 (438)
T 1wyu_A 246 YGADIAVGDGQSLGLPMGFGGP-HFGFLATKKA 277 (438)
T ss_dssp HTCSEEEEECTTTTCCCGGGCS-CCEEEEECGG
T ss_pred CCCCEEEECCcccCCCccCCCC-CeeEEEEcHH
Confidence 358999999888 67778 8999888764
No 53
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=55.24 E-value=9.4 Score=27.01 Aligned_cols=27 Identities=19% Similarity=0.318 Sum_probs=22.2
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCch
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQS 53 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~~ 53 (102)
.+|.++.++||+ +.|.++|++++++..
T Consensus 189 ~~d~~~~s~~K~-~g~~g~g~~~~~~~~ 215 (382)
T 4hvk_A 189 GADMLTISSNDI-YGPKGVGALWIRKEA 215 (382)
T ss_dssp TCSEEEEESGGG-TSCTTCEEEEEETTC
T ss_pred CCCEEEEeHHHh-cCCCceEEEEEcCcc
Confidence 479999999997 457789999998753
No 54
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=51.98 E-value=12 Score=27.03 Aligned_cols=27 Identities=30% Similarity=0.336 Sum_probs=21.7
Q ss_pred CCCcCCeeeecccccCCCCCCceeEEEe
Q psy8011 23 RQVLADSVTWNPHKLLTAPQQCSVFLTR 50 (102)
Q Consensus 23 gie~ADSis~D~HK~L~~P~~cg~ll~r 50 (102)
+++.+|-++..+||++..|.+ |.++++
T Consensus 213 ~~~~~di~~~s~sK~~~g~~g-G~~~~~ 239 (405)
T 2vi8_A 213 PVPYAHFVTTTTHKTLRGPRG-GMILCQ 239 (405)
T ss_dssp STTTCSEEEEESSSTTCCCSC-EEEEEC
T ss_pred ccccCCEEEEeccccCCCCCC-eEEEEc
Confidence 345689888999999987777 887776
No 55
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=51.08 E-value=15 Score=25.89 Aligned_cols=26 Identities=31% Similarity=0.321 Sum_probs=19.1
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCch
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQS 53 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~~ 53 (102)
.+|.+++.+||++..|. |.+++.++.
T Consensus 193 ~~d~~~~s~sK~l~~~~--G~~~~~~~~ 218 (347)
T 1jg8_A 193 YADSVMFCLSKGLCAPV--GSVVVGDRD 218 (347)
T ss_dssp TCSEEEEESSSTTCCSS--CEEEEECHH
T ss_pred cccEEEEecccccCCCc--eEEEEcCHH
Confidence 57899999999999874 544555543
No 56
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=48.67 E-value=15 Score=26.14 Aligned_cols=24 Identities=17% Similarity=0.156 Sum_probs=18.9
Q ss_pred cCCeeeecccccCCCCCCceeEEEeC
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRH 51 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd 51 (102)
.++.+++.+||++. | ++|.+++.+
T Consensus 173 ~i~~~s~s~~K~~~-~-g~g~~~~~~ 196 (375)
T 2fnu_A 173 LASVFSFHAIKPIT-T-AEGGAVVTN 196 (375)
T ss_dssp SEEEEECCTTSSSC-C-SSCEEEEES
T ss_pred CeEEEeCCCCCCcc-c-cCceEEEeC
Confidence 47788899999984 4 788888853
No 57
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=46.24 E-value=15 Score=26.73 Aligned_cols=26 Identities=19% Similarity=0.431 Sum_probs=21.5
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
.+|.++.++||+ +.|.++|++++++.
T Consensus 215 ~~di~~~s~sK~-~g~~g~G~~~~~~~ 240 (423)
T 3lvm_A 215 KVDLMSFSGHKI-YGPKGIGALYVRRK 240 (423)
T ss_dssp CCSEEEEESTTT-TSCSSCEEEEECBT
T ss_pred CCCEEEechHHh-cCCCCeEEEEEecc
Confidence 379999999995 56788999998754
No 58
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=46.03 E-value=15 Score=26.10 Aligned_cols=26 Identities=19% Similarity=0.358 Sum_probs=20.8
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
.+|.++.++||++. |.++|.+++++.
T Consensus 193 ~~di~~~s~sK~~g-~~G~G~~~~~~~ 218 (384)
T 1eg5_A 193 EVDYASFSAHKFHG-PKGVGITYIRKG 218 (384)
T ss_dssp CCSEEEEEGGGGTS-CTTCEEEEECTT
T ss_pred CCCEEEecHHHhcC-CCceEEEEEcCC
Confidence 47999999999854 556899888764
No 59
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=45.80 E-value=11 Score=27.15 Aligned_cols=24 Identities=21% Similarity=0.325 Sum_probs=19.9
Q ss_pred CCeeeecccccCCCCCCceeEEEeC
Q psy8011 27 ADSVTWNPHKLLTAPQQCSVFLTRH 51 (102)
Q Consensus 27 ADSis~D~HK~L~~P~~cg~ll~rd 51 (102)
+|.++.++|| ++.|.++|.+++++
T Consensus 222 ~di~~~s~sK-~~~~~g~G~~~~~~ 245 (420)
T 1t3i_A 222 CDWLVASGHK-MCAPTGIGFLYGKE 245 (420)
T ss_dssp CSEEEEEGGG-TTSCTTCEEEEECH
T ss_pred CCEEEEehhh-hcCCCceEEEEEch
Confidence 7999999999 55677889888864
No 60
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=45.76 E-value=13 Score=26.10 Aligned_cols=28 Identities=14% Similarity=0.177 Sum_probs=22.7
Q ss_pred cCCeeeecccccCCCCCC--ceeEEEeCch
Q psy8011 26 LADSVTWNPHKLLTAPQQ--CSVFLTRHQS 53 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~--cg~ll~rd~~ 53 (102)
.+|-++..+||++..|-. +|.++.+++.
T Consensus 135 ~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~ 164 (331)
T 1pff_A 135 GVDIVVHSATKYINGHTDVVAGLVCSRADI 164 (331)
T ss_dssp TCSEEEEETTTTTSSSSSCCCEEEEECHHH
T ss_pred CCcEEEEECccccCCCCCceEEEEEeCcHH
Confidence 379999999999999887 7787776533
No 61
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=44.00 E-value=10 Score=27.42 Aligned_cols=23 Identities=30% Similarity=0.316 Sum_probs=18.7
Q ss_pred CCeeeecccccCCCCCCce-eEEEeC
Q psy8011 27 ADSVTWNPHKLLTAPQQCS-VFLTRH 51 (102)
Q Consensus 27 ADSis~D~HK~L~~P~~cg-~ll~rd 51 (102)
+|.++.++||++. |. +| .+++++
T Consensus 218 ~d~~~~s~~K~~g-~~-~G~~~~~~~ 241 (406)
T 3cai_A 218 ADVVTVNAHAWGG-PP-IGAMVFRDP 241 (406)
T ss_dssp CSEEEEEGGGGTS-CS-CEEEEESCH
T ss_pred CCEEEeehhhhcC-CC-cCeEEEEeh
Confidence 7999999999875 65 88 777765
No 62
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=43.77 E-value=24 Score=24.96 Aligned_cols=28 Identities=21% Similarity=0.087 Sum_probs=20.6
Q ss_pred CcCCeeeecccccCCCCCCceeEEEeCchH
Q psy8011 25 VLADSVTWNPHKLLTAPQQCSVFLTRHQSV 54 (102)
Q Consensus 25 e~ADSis~D~HK~L~~P~~cg~ll~rd~~~ 54 (102)
..+|.+++.+||++..|.+ .+++.++..
T Consensus 197 ~~~d~~~~s~sK~~~~~~g--g~~~~~~~l 224 (359)
T 3pj0_A 197 ALFDSVYVSFYKGIGGIAG--AILAGNDDF 224 (359)
T ss_dssp TTCSEEEEESSSTTCCSSC--EEEEECHHH
T ss_pred ccCCEEEEeccccCCCcce--EEEECCHHH
Confidence 3579999999999999855 445556543
No 63
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=42.57 E-value=13 Score=30.82 Aligned_cols=28 Identities=18% Similarity=0.065 Sum_probs=24.1
Q ss_pred cCC----eeeecccccCCCCCCceeEEEeCch
Q psy8011 26 LAD----SVTWNPHKLLTAPQQCSVFLTRHQS 53 (102)
Q Consensus 26 ~AD----Sis~D~HK~L~~P~~cg~ll~rd~~ 53 (102)
.+| .++..+||+|..|-.+|++++++..
T Consensus 341 g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~ 372 (730)
T 1c4k_A 341 GPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSH 372 (730)
T ss_dssp CTTSCEEEEEECHHHHSSCCTTCEEEEEECGG
T ss_pred CCCCCCEEEEECCCCCCCCCCCEEEEEecchh
Confidence 467 8999999999999999999888763
No 64
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=41.37 E-value=20 Score=26.52 Aligned_cols=26 Identities=12% Similarity=-0.120 Sum_probs=21.7
Q ss_pred cCCeeeecccccCCCCCC-ceeEEEeC
Q psy8011 26 LADSVTWNPHKLLTAPQQ-CSVFLTRH 51 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~-cg~ll~rd 51 (102)
.+|-++..+||++..|.. .|.+++.+
T Consensus 192 ~~di~~~S~~K~~~~~~~~~G~~~~~~ 218 (412)
T 2cb1_A 192 GAHVVVESLTKWASGHGSVLGGAVLSR 218 (412)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred CCeEEEECCcccccCCCCcEEEEEEec
Confidence 489999999999999887 67777665
No 65
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=41.15 E-value=16 Score=26.91 Aligned_cols=27 Identities=19% Similarity=0.220 Sum_probs=22.4
Q ss_pred cCCeeeecccccCCCCCC--ceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQ--CSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~--cg~ll~rd~ 52 (102)
.+|-++..+||++..|.. +|+++.++.
T Consensus 201 ~~d~~~~S~sK~~~~~~~~~~G~l~~~~~ 229 (398)
T 1gc0_A 201 GADLVVHSATKYLSGHGDITAGIVVGSQA 229 (398)
T ss_dssp TCSEEEEETTTTTTCSSSCCCEEEEECHH
T ss_pred CceEEEECCccccCCCCCCeEEEEEEChH
Confidence 479999999999999987 688777654
No 66
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=40.68 E-value=16 Score=25.88 Aligned_cols=25 Identities=16% Similarity=0.239 Sum_probs=20.7
Q ss_pred CCeeeecccccCCCCCCceeEEEeCc
Q psy8011 27 ADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 27 ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
.|-++..+||++. |.++|.+++++.
T Consensus 187 ~di~~~s~sK~~~-~~G~G~~~~~~~ 211 (360)
T 1w23_A 187 FGMIYAGAQKNLG-PSGVTVVIVKKD 211 (360)
T ss_dssp CSEEEEETTTTTS-CTTCEEEEEEHH
T ss_pred CCEEEEEcccccC-CCCcEEEEEcHH
Confidence 3889999999887 668999988754
No 67
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=40.00 E-value=21 Score=28.66 Aligned_cols=28 Identities=29% Similarity=0.285 Sum_probs=24.3
Q ss_pred CCcCCeeeecccccCCCCCCceeEEEeCc
Q psy8011 24 QVLADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 24 ie~ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
++.||-||...||.|.=|- +|++++|+.
T Consensus 254 ~~~ADvVTtTTHKTLrGPr-GG~Il~~~~ 281 (490)
T 3ou5_A 254 FKHADIVTTTTHKTLRGAR-SGLIFYRKG 281 (490)
T ss_dssp GGTCSEEEEESSSTTCSCS-CEEEEEECS
T ss_pred cccceEEeccccccccCCC-ceEEEeccc
Confidence 6789999999999999998 577788763
No 68
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=38.65 E-value=17 Score=26.01 Aligned_cols=25 Identities=20% Similarity=0.375 Sum_probs=20.4
Q ss_pred cCCeeeecccccCCCCCCceeEEEeC
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRH 51 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd 51 (102)
.+|-++..+||.+ .|.++|.+++++
T Consensus 216 ~~d~~~~s~~K~~-g~~G~G~~~~~~ 240 (406)
T 1kmj_A 216 DCDFYVFSGHKLY-GPTGIGILYVKE 240 (406)
T ss_dssp TCSEEEEEGGGTT-SCTTCEEEEECH
T ss_pred CCCEEEEEchhcc-CCCCcEEEEEeH
Confidence 3789999999977 566789988863
No 69
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=37.25 E-value=32 Score=24.67 Aligned_cols=29 Identities=28% Similarity=0.400 Sum_probs=22.5
Q ss_pred CcCCeeeecccccCCCCCCceeEEEeCchH
Q psy8011 25 VLADSVTWNPHKLLTAPQQCSVFLTRHQSV 54 (102)
Q Consensus 25 e~ADSis~D~HK~L~~P~~cg~ll~rd~~~ 54 (102)
+.+|-++..+||+|.-+.. |.++++++..
T Consensus 215 ~~~di~~~s~sK~l~g~~~-G~~~~~~~~~ 243 (407)
T 2dkj_A 215 PYAHVVTSTTHKTLRGPRG-GLILSNDPEL 243 (407)
T ss_dssp TTCSEEEEESSGGGCCCSC-EEEEESCHHH
T ss_pred ccccEEEEeccccCCCCCc-eEEEECCHHH
Confidence 3579999999999887765 8888875443
No 70
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=37.05 E-value=31 Score=24.98 Aligned_cols=27 Identities=22% Similarity=0.222 Sum_probs=22.4
Q ss_pred cCCeeeecccccCCCCCCc--eeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQC--SVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~c--g~ll~rd~ 52 (102)
.+|-++..+||++..|... |.++++++
T Consensus 188 ~~di~~~s~sK~~~~~~~~~~G~~~~~~~ 216 (386)
T 1cs1_A 188 GADLVLHSCTKYLNGHSDVVAGVVIAKDP 216 (386)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEESSH
T ss_pred CceEEEEcCcccccCCCCceeEEEEeCcH
Confidence 3788999999999999873 88888764
No 71
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=36.16 E-value=22 Score=25.97 Aligned_cols=27 Identities=15% Similarity=0.211 Sum_probs=22.2
Q ss_pred cCCeeeecccccCCCCCC--ceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQ--CSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~--cg~ll~rd~ 52 (102)
.+|-++..+||++..|.. +|.++.++.
T Consensus 200 ~~di~~~s~sK~~~~~g~~~~G~~~~~~~ 228 (398)
T 2rfv_A 200 GADIVVHSVTKYINGHGDVIGGIIVGKQE 228 (398)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEECHH
T ss_pred CCcEEEEeCcccccCCCCceEEEEEECHH
Confidence 379999999999999887 688777653
No 72
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=36.11 E-value=23 Score=25.41 Aligned_cols=25 Identities=24% Similarity=0.496 Sum_probs=21.3
Q ss_pred CCeeeecccccCCCCCCceeEE-EeCc
Q psy8011 27 ADSVTWNPHKLLTAPQQCSVFL-TRHQ 52 (102)
Q Consensus 27 ADSis~D~HK~L~~P~~cg~ll-~rd~ 52 (102)
+|.++.++|| ++.|.++|+++ ++++
T Consensus 211 ~d~~~~s~~K-~~g~~g~g~~~~~~~~ 236 (400)
T 3vax_A 211 IDMISISGHK-IGAPKGVGALVTRRRE 236 (400)
T ss_dssp CSEEEEETGG-GTSCSSCEEEEECBCS
T ss_pred CcEEEEeHHH-hCCCCceEEEEEecch
Confidence 8999999999 45688899999 8873
No 73
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=35.78 E-value=26 Score=25.66 Aligned_cols=26 Identities=15% Similarity=0.047 Sum_probs=22.8
Q ss_pred cCCeeeecccccCCCCCC--ceeEEEeC
Q psy8011 26 LADSVTWNPHKLLTAPQQ--CSVFLTRH 51 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~--cg~ll~rd 51 (102)
.+|-++..+||++..|.. +|.++.++
T Consensus 195 ~~di~~~S~sK~~~~~~~~~~G~v~~~~ 222 (389)
T 3acz_A 195 GADIALHSVSKYINGHGDVIGGVSSAKT 222 (389)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEESS
T ss_pred CCeEEEECChhhccCCCCceeEEEEECc
Confidence 479999999999999988 78888876
No 74
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=35.31 E-value=31 Score=25.11 Aligned_cols=30 Identities=10% Similarity=0.220 Sum_probs=23.4
Q ss_pred CcCCeeeecccccCCCCCCceeEEEeCchHH
Q psy8011 25 VLADSVTWNPHKLLTAPQQCSVFLTRHQSVL 55 (102)
Q Consensus 25 e~ADSis~D~HK~L~~P~~cg~ll~rd~~~l 55 (102)
..+|.+++++||.+. |..+|.++++++...
T Consensus 173 ~~~~~~s~s~~K~l~-~~~~G~~~~~~~~l~ 202 (394)
T 1o69_A 173 GEFGVYSYNGNKIIT-TSGGGMLIGKNKEKI 202 (394)
T ss_dssp SSEEEEECCTTSSSC-CSSCEEEEESCHHHH
T ss_pred cCcEEEEEeCCccCC-CCCceEEEECCHHHH
Confidence 357899999999775 778999998765543
No 75
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=35.07 E-value=27 Score=25.55 Aligned_cols=27 Identities=19% Similarity=0.254 Sum_probs=20.4
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCch
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQS 53 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~~ 53 (102)
.++.+++++||++..+ .+|.++.+++.
T Consensus 182 ~~~~~s~s~~K~~~~g-~~g~~~~~~~~ 208 (418)
T 2c81_A 182 DIGAFSCQQGKVLTAG-EGGIIVTKNPR 208 (418)
T ss_dssp SEEEEECCTTSSSCSS-SCEEEEESCHH
T ss_pred ceEEEeccCCcccCCC-CeEEEEECCHH
Confidence 4778888889999885 67777665554
No 76
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=33.19 E-value=47 Score=23.40 Aligned_cols=28 Identities=21% Similarity=0.070 Sum_probs=20.8
Q ss_pred CcCCeeeecccccCCCCCCceeEEEeCchH
Q psy8011 25 VLADSVTWNPHKLLTAPQQCSVFLTRHQSV 54 (102)
Q Consensus 25 e~ADSis~D~HK~L~~P~~cg~ll~rd~~~ 54 (102)
+.+|.++..+||++..|.+ |. ++.++..
T Consensus 195 ~~~d~~~~s~sK~~~~~~g-g~-~~~~~~~ 222 (357)
T 3lws_A 195 GLFDSIYISFYKGLGGIAG-AI-LAGPAAF 222 (357)
T ss_dssp TTSSEEEEESSSTTCCSSC-EE-EEECHHH
T ss_pred hcCCEEEEeccccCCCCce-EE-EEcCHHH
Confidence 4579999999999988877 55 4555543
No 77
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=32.23 E-value=44 Score=24.64 Aligned_cols=28 Identities=14% Similarity=0.055 Sum_probs=20.6
Q ss_pred cCCeeeecccccCCCCCCceeEEEeCchH
Q psy8011 26 LADSVTWNPHKLLTAPQQCSVFLTRHQSV 54 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~cg~ll~rd~~~ 54 (102)
.+|.++++.||++..| .+|.++.+++..
T Consensus 247 ~~d~~~~S~kk~~~~~-~gG~~~~~~~~~ 274 (456)
T 2ez2_A 247 YADGCTMSGKKDCLVN-IGGFLCMNDDEM 274 (456)
T ss_dssp TCSEEEEETTTTTCCS-SCEEEEESCHHH
T ss_pred cCCEEEEeCcccCCCC-ceeEEEECCHHH
Confidence 4688888899998866 567766655543
No 78
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=29.23 E-value=40 Score=25.03 Aligned_cols=25 Identities=16% Similarity=-0.033 Sum_probs=20.5
Q ss_pred cCCeeeecccccCCCCCC-ceeEEEe
Q psy8011 26 LADSVTWNPHKLLTAPQQ-CSVFLTR 50 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~-cg~ll~r 50 (102)
.+|-++..+||++..|.. .|.+++.
T Consensus 196 ~~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 196 GAALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred CCeEEEECCcccccCCCCcEEEEEEe
Confidence 389999999999999875 6666675
No 79
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=26.80 E-value=68 Score=23.00 Aligned_cols=29 Identities=24% Similarity=0.361 Sum_probs=21.8
Q ss_pred CCcCCeeeecccccCCCCCCceeEEEeCch
Q psy8011 24 QVLADSVTWNPHKLLTAPQQCSVFLTRHQS 53 (102)
Q Consensus 24 ie~ADSis~D~HK~L~~P~~cg~ll~rd~~ 53 (102)
++.+|-++..+||++..|. +|.++.+++.
T Consensus 215 ~~~~di~~~s~sK~l~g~~-~G~~~~~~~~ 243 (417)
T 3n0l_A 215 FPYAHVVSSTTHKTLRGPR-GGIIMTNDEE 243 (417)
T ss_dssp TTTCSEEEEESSTTTCSCS-CEEEEESCHH
T ss_pred cccceEEEeeCccccCCCC-eeEEEECCHH
Confidence 3457999999999997666 4777776544
No 80
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=24.73 E-value=66 Score=24.60 Aligned_cols=28 Identities=18% Similarity=0.247 Sum_probs=23.0
Q ss_pred cCCeeeecccccCCCCCCc--eeEEEeCch
Q psy8011 26 LADSVTWNPHKLLTAPQQC--SVFLTRHQS 53 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~c--g~ll~rd~~ 53 (102)
.+|-++..+||+++.|.++ |.++++++.
T Consensus 268 ~~div~~S~sK~~~g~~Gl~~G~l~~~~~~ 297 (464)
T 1ibj_A 268 GADIVMHSATKFIAGHSDVMAGVLAVKGEK 297 (464)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEECSHH
T ss_pred CCEEEEECCcccccCCCCCcEEEEEEChHH
Confidence 3799999999999998764 988888643
No 81
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=24.64 E-value=41 Score=24.16 Aligned_cols=24 Identities=25% Similarity=0.225 Sum_probs=19.8
Q ss_pred CCeeeecccccCCCCCCceeEEEeCc
Q psy8011 27 ADSVTWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 27 ADSis~D~HK~L~~P~~cg~ll~rd~ 52 (102)
+|.+++ ||++..+..+|.+++++.
T Consensus 247 ~d~~s~--sK~~~~g~~~G~~~~~~~ 270 (395)
T 1vef_A 247 PDILTL--AKALGGGVPLGVAVMREE 270 (395)
T ss_dssp CSEEEE--CGGGGTTSSCEEEEEEHH
T ss_pred CCEEEE--cccccCCCceEEEEehHH
Confidence 576654 999999999999999764
No 82
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=24.54 E-value=59 Score=23.30 Aligned_cols=27 Identities=30% Similarity=0.369 Sum_probs=20.3
Q ss_pred CCcCCeeeecccccCCCCCCceeEEEeC
Q psy8011 24 QVLADSVTWNPHKLLTAPQQCSVFLTRH 51 (102)
Q Consensus 24 ie~ADSis~D~HK~L~~P~~cg~ll~rd 51 (102)
++.+|-++..+||++..|.+ |.++.++
T Consensus 220 ~~~~di~~~s~sK~~~g~~g-g~~~~~~ 246 (420)
T 3gbx_A 220 VPHAHVVTTTTHKTLAGPRG-GLILAKG 246 (420)
T ss_dssp TTTSSEEEEESSGGGCSCSC-EEEEESS
T ss_pred cccCCEEEeecccCCCCCCc-eEEEEcC
Confidence 44589999999999976664 6666654
No 83
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=24.44 E-value=43 Score=24.72 Aligned_cols=27 Identities=11% Similarity=0.170 Sum_probs=22.5
Q ss_pred cCCeeeecccccCCCCCC--ceeEEEeCc
Q psy8011 26 LADSVTWNPHKLLTAPQQ--CSVFLTRHQ 52 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~--cg~ll~rd~ 52 (102)
.+|-++..+||++..|-. +|.++.++.
T Consensus 199 ~~di~~~S~sK~~~~~g~ri~G~~~~~~~ 227 (404)
T 1e5e_A 199 GVDVVVHSATKYINGHTDVVAGLICGKAD 227 (404)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEECHH
T ss_pred CCEEEEEcCccccCCCCCCeEEEEEECHH
Confidence 379999999999999987 688877654
No 84
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=23.94 E-value=37 Score=28.15 Aligned_cols=26 Identities=35% Similarity=0.377 Sum_probs=23.0
Q ss_pred CCee---eecccccCCCCCCceeEEEeCc
Q psy8011 27 ADSV---TWNPHKLLTAPQQCSVFLTRHQ 52 (102)
Q Consensus 27 ADSi---s~D~HK~L~~P~~cg~ll~rd~ 52 (102)
+|-+ +..+||+|..+-.+|.+.+++.
T Consensus 355 aD~vii~~~S~hKtL~gltqgs~i~v~~~ 383 (715)
T 3n75_A 355 EGKVIYETQSTHKLLAAFSQASMIHVKGD 383 (715)
T ss_dssp TTCEEEEEECHHHHSSCCTTCEEEEEESC
T ss_pred CCEEEEEEecccccccCCCCeeEEEeCch
Confidence 6876 8999999999999999999865
No 85
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=23.94 E-value=88 Score=22.05 Aligned_cols=28 Identities=18% Similarity=0.220 Sum_probs=20.8
Q ss_pred CCeeeeccc--ccCCCCCCceeEEEeCchH
Q psy8011 27 ADSVTWNPH--KLLTAPQQCSVFLTRHQSV 54 (102)
Q Consensus 27 ADSis~D~H--K~L~~P~~cg~ll~rd~~~ 54 (102)
+|-++..+| |++..+-.+|+++.+++..
T Consensus 176 ~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~ 205 (374)
T 3uwc_A 176 GQFACFSLHPLKNLNVWSDAGVIITHSDEY 205 (374)
T ss_dssp SSEEEEECSSSSSSCCSSCCEEEEESCHHH
T ss_pred ccEEEEeCCCCCcCCccceeEEEEeCCHHH
Confidence 599999988 9997733477777776543
No 86
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=22.87 E-value=83 Score=23.04 Aligned_cols=28 Identities=18% Similarity=0.198 Sum_probs=22.5
Q ss_pred cCCeeeecccccCCCCCC--ceeEEEeCch
Q psy8011 26 LADSVTWNPHKLLTAPQQ--CSVFLTRHQS 53 (102)
Q Consensus 26 ~ADSis~D~HK~L~~P~~--cg~ll~rd~~ 53 (102)
.+|-++...||++..+-+ +|+++.+++.
T Consensus 202 ~~di~~~S~sK~lg~~g~~~~G~v~~~~~~ 231 (392)
T 3qhx_A 202 GADVVLHSTTKYIGGHSDVVGGALVTNDEE 231 (392)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEESCHH
T ss_pred CCcEEEEcCccccCCCCCceEEEEEECcHH
Confidence 479999999999998854 8888777644
No 87
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=20.06 E-value=90 Score=22.19 Aligned_cols=27 Identities=11% Similarity=0.107 Sum_probs=17.9
Q ss_pred Ceeeec--ccccCCCCCCceeEEEeCchH
Q psy8011 28 DSVTWN--PHKLLTAPQQCSVFLTRHQSV 54 (102)
Q Consensus 28 DSis~D--~HK~L~~P~~cg~ll~rd~~~ 54 (102)
|-++.. +||++..+-.+|+++.+++..
T Consensus 175 di~~~Sf~~~K~l~~~g~gg~~~~~~~~l 203 (367)
T 3nyt_A 175 TVACTSFFPSAPLGCYGDGGAIFTNDDEL 203 (367)
T ss_dssp SEEEEECCTTSSSCCSSCCEEEEESCHHH
T ss_pred CEEEEECCCCCcCCCcCceeEEEeCCHHH
Confidence 545554 799998843477777766554
Done!