RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8012
(271 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 76.6 bits (187), Expect = 1e-16
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Query: 108 ALIYAAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNV 167
L A++ G+ IV LL GA N + T LHMA R + + + LL++ A N
Sbjct: 3 PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTE-VAKYLLQNKAKVNA 61
Query: 168 VDGKTGKTPLLHA-GKGAREVNTVLLYFIHEIFKLMANN 205
K +TPL A G + +LL
Sbjct: 62 KA-KDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAG 99
Score = 68.8 bits (167), Expect = 5e-14
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 80 VRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGADVNFKSATGF 139
VK ++ GA NVS+ + + L AA G+ E+ LL N A VN K+
Sbjct: 8 SFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQ 67
Query: 140 TALHMACRFHDDDSIVRKLLRHGA 163
T LH A R + +V+ LL + A
Sbjct: 68 TPLHCAARIGHTN-MVKLLLENNA 90
Score = 64.6 bits (156), Expect = 2e-12
Identities = 33/161 (20%), Positives = 53/161 (32%), Gaps = 28/161 (17%)
Query: 11 YEDHKPIAIAIQIGDPQIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLL 70
P+ + Q G + L HG +D
Sbjct: 262 KSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTP--------------------- 300
Query: 71 RLNLDFLKNVRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGAD 130
VK ++ A +N ++ S L AA +G+ +IV LLL NGA
Sbjct: 301 -----LHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGAS 355
Query: 131 VNFKSATGFTALHMACRFHDDD--SIVRKLLRHGAYYNVVD 169
N S+ G T L +A R +++ + ++ V D
Sbjct: 356 PNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSD 396
Score = 62.3 bits (150), Expect = 1e-11
Identities = 51/277 (18%), Positives = 93/277 (33%), Gaps = 40/277 (14%)
Query: 14 HKPIAIAIQIGDPQIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLLRLN 73
P+ +A + G ++ + L A + + K H A+ + LL
Sbjct: 133 FTPLHVAAKYGKVRVAELLLERDAHPN----AAGKNGLTPLHVAVHHNNLDIVKLLLPRG 188
Query: 74 LD-----------FLKNVRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVD 122
+ N+ + + ++ G N S + + L AA +G+ E+V
Sbjct: 189 GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVA 248
Query: 123 LLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHAGK 182
LLL A+ N + +G T LH+ + + L++HG + + G TPL A
Sbjct: 249 LLLSKQANGNLGNKSGLTPLHLVAQEGHVP-VADVLIKHGVMVDATT-RMGYTPLHVASH 306
Query: 183 GAREVNTVLLYFIHEIFKLMANNDTTIL------DRLDEMKSLILEGTKEFGPGDYNNFS 236
L + L D + L+ G N
Sbjct: 307 YGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG------ASPN--- 357
Query: 237 LLKVTKNDAGETILDIAKKRGFP----LLEELEKKLA 269
+ G T L IAK+ G+ +L+ + + +
Sbjct: 358 ----EVSSDGTTPLAIAKRLGYISVTDVLKVVTDETS 390
Score = 60.8 bits (146), Expect = 3e-11
Identities = 42/206 (20%), Positives = 70/206 (33%), Gaps = 9/206 (4%)
Query: 12 EDHKPIAIAIQIGDPQIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLLR 71
+D P+ A +IG +VK L + A + + + A +
Sbjct: 65 DDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEAS 124
Query: 72 LNL-------DFLKNVRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLL 124
+ K + +E A N + + + L A +IV LL
Sbjct: 125 QACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL 184
Query: 125 LDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHAGKGA 184
L G + + G+T LH+A + + + + R LL++G N G TPL A +
Sbjct: 185 LPRGGSPHSPAWNGYTPLHIAAKQNQVE-VARSLLQYGGSANAES-VQGVTPLHLAAQEG 242
Query: 185 REVNTVLLYFIHEIFKLMANNDTTIL 210
LL L + T L
Sbjct: 243 HAEMVALLLSKQANGNLGNKSGLTPL 268
Score = 53.1 bits (126), Expect = 1e-08
Identities = 42/198 (21%), Positives = 64/198 (32%), Gaps = 61/198 (30%)
Query: 16 PIAIAIQIGDPQIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLLRLNLD 75
P+ +A +G IVK L GA + N H A
Sbjct: 3 PLHVASFMGHLPIVKNLLQRGASPNV----SNVKVETPLHMA------------------ 40
Query: 76 FLKNVRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDN-------- 127
R+ + K +++ A +N ++ + L AA G+ +V LLL+N
Sbjct: 41 ----ARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLAT 96
Query: 128 -------------------------GADVNFKSATGFTALHMACRFHDDDSIVRKLLRHG 162
A + GFT LH+A ++ + LL
Sbjct: 97 TAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVR-VAELLLERD 155
Query: 163 AYYNVVDGKTGKTPLLHA 180
A+ N K G TPL A
Sbjct: 156 AHPNAAG-KNGLTPLHVA 172
Score = 40.7 bits (94), Expect = 1e-04
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 140 TALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHA-GKGAREVNTVLL 192
T LH+A IV+ LL+ GA NV + +TPL A G EV LL
Sbjct: 2 TPLHVASF-MGHLPIVKNLLQRGASPNVSN-VKVETPLHMAARAGHTEVAKYLL 53
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 67.7 bits (164), Expect = 8e-14
Identities = 33/156 (21%), Positives = 57/156 (36%), Gaps = 25/156 (16%)
Query: 16 PIAIAIQIGDPQIVKEL-QNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLLRLNL 74
+ A + G +++K L GA ++ A S+ + + + L
Sbjct: 151 ALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLL----- 205
Query: 75 DFLKNVRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLD-NGADVNF 133
++ GA +NV ER + LI A K + +V LL+ ++N
Sbjct: 206 -----------------LDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIND 248
Query: 134 KSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVD 169
+ G TAL +A I L + GA + D
Sbjct: 249 TDSDGKTALLLAVELKLKK-IAELLCKRGASTDCGD 283
Score = 55.7 bits (133), Expect = 1e-09
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 7/119 (5%)
Query: 80 VRSNKYDEVKKNI-EDGACINVSSERCGSALIYAAWKG----YEEIVDLLLDNGADVNFK 134
+ +K + E GA +N +ALI+A E I LLLD+GADVN +
Sbjct: 156 AEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVR 215
Query: 135 SATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHA-GKGAREVNTVLL 192
G T L +A + R L + N D GKT LL A +++ +L
Sbjct: 216 GERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTD-SDGKTALLLAVELKLKKIAELLC 273
Score = 54.2 bits (129), Expect = 3e-09
Identities = 38/91 (41%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 107 SALIYAAWKGYEEIVDLLLDN-GADVNFKSATGFTALHMACRFHDD---DSIVRKLLRHG 162
+AL+ AA KG+ E++ +LLD GADVN G AL A DD ++I LL HG
Sbjct: 150 TALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG 209
Query: 163 AYYNVVDGKTGKTPLLHAG-KGAREVNTVLL 192
A NV + GKTPL+ A K + LL
Sbjct: 210 ADVNVRG-ERGKTPLILAVEKKHLGLVQRLL 239
Score = 51.1 bits (121), Expect = 3e-08
Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 4/154 (2%)
Query: 107 SALIYAAWKGYEEIVDLLLDNGADVNFK-SATGFTALHMACRFHDDDSIVRKLLRHGAYY 165
LI A ++V LL+ GA+VNF+ G+T LH A + +D IV LLRHGA
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSRED-IVELLLRHGADP 65
Query: 166 NVVDGKTGKTPLLHAGKGAREVNTVLLYFIHEIFKLMANNDTTILD--RLDEMKSLILEG 223
+ LL A G+ ++ + L ++ + T ++ ++K+L
Sbjct: 66 VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLY 125
Query: 224 TKEFGPGDYNNFSLLKVTKNDAGETILDIAKKRG 257
+ + G T L A ++G
Sbjct: 126 KRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 159
Score = 43.0 bits (100), Expect = 2e-05
Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 20/177 (11%)
Query: 12 EDHKPIAIAIQIGDPQIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLLR 71
ED+ + A+Q D +V++L GA ++ + A + + +
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63
Query: 72 LNLDFLKN--------VRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDL 123
+ KN + +K + GA +N +A + AA G + +
Sbjct: 64 DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123
Query: 124 LLDNGADVNFKSAT----------GFTALHMACRFHDDDSIVRKLLRH-GAYYNVVD 169
L GA+VN + T G TAL A +++ LL GA N D
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAE-KGHVEVLKILLDEMGADVNACD 179
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 63.8 bits (154), Expect = 8e-13
Identities = 28/133 (21%), Positives = 46/133 (34%), Gaps = 33/133 (24%)
Query: 92 IEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGADVNFKSATGFTALH-------- 143
+ GA +N ++ + L YAA K EI +LL+ GA+ + K TA+H
Sbjct: 90 LGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNL 149
Query: 144 ------------------------MACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLH 179
+ + L+ GA + + K KTPL
Sbjct: 150 KMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIEN-KEEKTPLQV 208
Query: 180 AGKGAREVNTVLL 192
A G + ++
Sbjct: 209 AKGGLGLILKRMV 221
Score = 59.6 bits (143), Expect = 2e-11
Identities = 48/232 (20%), Positives = 77/232 (33%), Gaps = 55/232 (23%)
Query: 73 NLDFLKNVRSNKYDEVKKNI-EDGACINVSSERCGSALIYAAWKGYEE------------ 119
NL S K +E+K++I D + + + +AL +A G+ E
Sbjct: 4 NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 63
Query: 120 ---------------------IVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKL 158
IV LL GA VN + G T LH A + + I L
Sbjct: 64 NDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHE-IAVML 122
Query: 159 LRHGAYYNVVDGKTGKTPLLHAGKGAREVNTVLLYFIHEIFKLMANNDTTIL------DR 212
L GA + D T + A +L + + T L +R
Sbjct: 123 LEGGANPDAKD-HYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEER 181
Query: 213 LDEMKSLILEGTKEFGPGDYNNFSLLKVTKNDAGETILDIAKKRGFPLLEEL 264
++E K L+ +G +N +T L +AK +L+ +
Sbjct: 182 VEEAKLLVSQGA------SIY-------IENKEEKTPLQVAKGGLGLILKRM 220
Score = 34.9 bits (79), Expect = 0.005
Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 8/118 (6%)
Query: 16 PIAIAIQIGDPQIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLLRLNL- 74
P+ A +I L GA D + + + A R A + N+
Sbjct: 106 PLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQ 165
Query: 75 ------DFLKNVRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLD 126
+ +E K + GA I + ++ + L A G I+ +++
Sbjct: 166 DTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAK-GGLGLILKRMVE 222
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 61.3 bits (147), Expect = 1e-11
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 95 GACINVSSERCGSALIYAAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSI 154
G+ + E + ++ AA +G E+V L+ GA V AT TA +A + + I
Sbjct: 211 GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHN-I 269
Query: 155 VRKLLR 160
V R
Sbjct: 270 VDIFDR 275
Score = 45.1 bits (105), Expect = 3e-06
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 127 NGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHA 180
G++ + + G T + +A + + +V L++ GA VD T T A
Sbjct: 210 KGSNKDKQDEDGKTPIMLAAQEGRIE-VVMYLIQQGASVEAVD-ATDHTARQLA 261
Score = 43.2 bits (100), Expect = 1e-05
Identities = 15/82 (18%), Positives = 26/82 (31%), Gaps = 10/82 (12%)
Query: 80 VRSNKYDEVKKNIEDGACINVSSERCG-SALIYAAWKGYEEIVDLLLDN--------GAD 130
+ + + I +N+ R + L + A E + L+ + GAD
Sbjct: 8 TEAAGSYAITEPITR-ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD 66
Query: 131 VNFKSATGFTALHMACRFHDDD 152
VN T L +A
Sbjct: 67 VNAMDCDENTPLMLAVLARRRR 88
Score = 38.9 bits (89), Expect = 4e-04
Identities = 9/46 (19%), Positives = 17/46 (36%)
Query: 80 VRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLL 125
+ + + V I+ GA + +A A + IVD+
Sbjct: 229 AQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 274
Score = 38.9 bits (89), Expect = 4e-04
Identities = 8/54 (14%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Query: 140 TALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHA-GKGAREVNTVLL 192
+ + + +I + R N++D + +T L + E + L+
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESV--NIIDPRHNRTVLHWIASNSSAEKSEDLI 53
Score = 26.6 bits (57), Expect = 3.6
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 16 PIAIAIQIGDPQIVKELQNHGAQIDK 41
PI +A Q G ++V L GA ++
Sbjct: 224 PIMLAAQEGRIEVVMYLIQQGASVEA 249
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 60.9 bits (146), Expect = 1e-11
Identities = 26/182 (14%), Positives = 48/182 (26%), Gaps = 23/182 (12%)
Query: 4 PYDPYVPYEDHKPIAIAIQIGDPQIVKELQNHGAQIDKEIYSKNKAAARIA------HSA 57
H + +A ++ L ++ ++ A
Sbjct: 69 AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPA 128
Query: 58 LELEERKAINDLLRLNLDFLKNVRSNKYDEVKKNIEDGACINVSSERCG----------- 106
+ N+ + D+ + + YD + R
Sbjct: 129 AVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPE 188
Query: 107 -----SALIYAAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRH 161
+ L A +++LLL GAD + G T L A + + R L H
Sbjct: 189 PTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPI-LARLLRAH 247
Query: 162 GA 163
GA
Sbjct: 248 GA 249
Score = 50.5 bits (119), Expect = 4e-08
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 107 SALIYAAWKGYEEIVDLLLDNGAD---VNFKSATGFTALHMACRFHD 150
+AL A +E +D LL A ++ ++ G TALH+A +
Sbjct: 11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGE 57
Score = 45.1 bits (105), Expect = 3e-06
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 132 NFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKT--GKTPLLHA 180
+ + G TALH+A H + + LL A + +D + G+T L A
Sbjct: 3 GYVTEDGDTALHLAVI-HQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLA 52
Score = 43.9 bits (102), Expect = 8e-06
Identities = 9/54 (16%), Positives = 18/54 (33%)
Query: 79 NVRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGADVN 132
V + ++ ++ GA + L A + + LL +GA
Sbjct: 199 AVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252
Score = 38.1 bits (87), Expect = 5e-04
Identities = 35/263 (13%), Positives = 68/263 (25%), Gaps = 45/263 (17%)
Query: 16 PIAIAIQIGDPQIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLLRLNLD 75
+ +A+ + L A + + +N H A
Sbjct: 12 ALHLAVIHQHEPFLDFLLGFSAGHE-YLDLQNDLGQTALHLA------------------ 52
Query: 76 FLKNVRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGADVNFKS 135
+ V+K GA + V+ +AL A +LL +
Sbjct: 53 ----AILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDA 108
Query: 136 A-------------TGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHAGK 182
+ T + + + ++ + + +
Sbjct: 109 SDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIH 168
Query: 183 GAREVNTVLLYFIHEIFKLMANNDTTILDRLDEMKSL-ILEGTKEFGPGDYNNFSLLKVT 241
E+ +L ++ K T L E ++ +LE + G D
Sbjct: 169 KDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG-ADPT-------A 220
Query: 242 KNDAGETILDIAKKRGFPLLEEL 264
+ G T L A R P+L L
Sbjct: 221 RMYGGRTPLGSALLRPNPILARL 243
Score = 28.5 bits (62), Expect = 0.83
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 16 PIAIAIQIGDPQIVKELQNHGAQIDKE 42
P+ A+ +P + + L+ HGA ++
Sbjct: 228 PLGSALLRPNPILARLLRAHGAPEPED 254
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 60.9 bits (146), Expect = 2e-11
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 93 EDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHDDD 152
++ G+AL AA KGY E++ LL+ DVN K G+T LH A + ++
Sbjct: 187 SGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEE 246
Query: 153 SIVRKLLRHGAYYNVVDGKTGKTPLLHA 180
R L+ + V+ K G+T A
Sbjct: 247 -ACRILVENLCDMEAVN-KVGQTAFDVA 272
Score = 59.3 bits (142), Expect = 5e-11
Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Query: 81 RSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGADVNFKSATGFT 140
+ +K I+ +N+ + L AA G EE +L++N D+ + G T
Sbjct: 208 AKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQT 267
Query: 141 ALHMACRFHDDDSIVRKLLRHGAYYNVV 168
A +A I+ L N++
Sbjct: 268 AFDVADE-----DILGYLEELQKKQNLL 290
Score = 52.0 bits (123), Expect = 2e-08
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 106 GSALIYAAWKGYEEIVDLLLDNGADVNFKSATGFTALHMAC 146
G+ + A G E V LL+ GAD+N+ + G TALH AC
Sbjct: 41 GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQAC 81
Score = 39.7 bits (91), Expect = 2e-04
Identities = 48/268 (17%), Positives = 84/268 (31%), Gaps = 26/268 (9%)
Query: 9 VPYEDHKPIAIAIQIGDPQIVKELQNHGAQIDKEIYSKNKA---AARIAHSALELEERKA 65
V ++D A GD + V L GA I+ A A + + +
Sbjct: 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVEN 95
Query: 66 INDLLRLNLDFLKNVRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLL 125
++ + + + + + E S EE ++ LL
Sbjct: 96 GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELL 155
Query: 126 DNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPL-LHAGKGA 184
N + D R+ L G +V K+G T L + A KG
Sbjct: 156 QNEVNRQGVDIEAARKEEERIMLRD----ARQWLNSGHINDVRHAKSGGTALHVAAAKGY 211
Query: 185 REVNTVLLYFIHEIFKLMANNDTTIL-----DRLDEMKSLILEGTKEFGPGDYNNFSLLK 239
EV +L+ +++ + T + + + + L+ D
Sbjct: 212 TEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL------CDME------ 259
Query: 240 VTKNDAGETILDIAKKRGFPLLEELEKK 267
N G+T D+A + LEEL+KK
Sbjct: 260 -AVNKVGQTAFDVADEDILGYLEELQKK 286
Score = 27.0 bits (58), Expect = 2.8
Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 9/66 (13%)
Query: 10 PYEDHKPIAIAIQIGDPQIVKELQNHGAQIDKEIYSKNKAAARIAHSALE-----LEERK 64
Y+ P+ A G + + L + ++ NK A E LEE +
Sbjct: 229 DYDGWTPLHAAAHWGKEEACRILVENLCDMEA----VNKVGQTAFDVADEDILGYLEELQ 284
Query: 65 AINDLL 70
+LL
Sbjct: 285 KKQNLL 290
Score = 25.5 bits (54), Expect = 7.6
Identities = 8/54 (14%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Query: 80 VRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGADVNF 133
K + + +E+ + ++ +A A E+I+ L + N
Sbjct: 240 AHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD----EDILGYLEELQKKQNL 289
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 59.9 bits (144), Expect = 4e-11
Identities = 14/124 (11%), Positives = 30/124 (24%), Gaps = 5/124 (4%)
Query: 73 NLDFLKNVRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVD---LLLDNGA 129
+ + + + + + + AA G +D LLL +
Sbjct: 58 MEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDE 117
Query: 130 DVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDG-KTGKTPLLHAGKGAREVN 188
V A + A +A ++ +L + A +
Sbjct: 118 IVKVIQAENYQAFRLAAENGHLH-VLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHV 176
Query: 189 TVLL 192
L
Sbjct: 177 LNRL 180
Score = 44.9 bits (105), Expect = 4e-06
Identities = 18/157 (11%), Positives = 38/157 (24%), Gaps = 16/157 (10%)
Query: 11 YEDHKPIAIAIQIGDPQIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLL 70
+ A+ G ++ L + + + + +N L
Sbjct: 195 ENYYAFRWAAVGRGHHNVINFLLDCPVMLAY----AEIHEFEYGEKYVNPFIARHVNRLK 250
Query: 71 RLNLDFLKNVRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGAD 130
++ F + +D V K+ + LI + + + LL
Sbjct: 251 EMHDAFKLSNPDGVFDLVTKSECLQGFYMLR------NLIRRNDEVLLDDIRFLLSIPGI 304
Query: 131 VNFKSA-----TGFTALHMACRFHDDDSIVRKLLRHG 162
L +A R + LL
Sbjct: 305 KALAPTATIPGDANELLRLALR-LGNQGACALLLSIP 340
Score = 37.2 bits (85), Expect = 0.002
Identities = 12/85 (14%), Positives = 19/85 (22%), Gaps = 14/85 (16%)
Query: 109 LIYAAWKGYEEIVDLLLDNGADVN-----------FKSATGFTALHMACRFHDDDS--IV 155
+ K E++ LL A N K +A + +
Sbjct: 50 IFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTL 109
Query: 156 RKLLRHGAYYNVVDGKTGKTPLLHA 180
LL V+ A
Sbjct: 110 CLLLTSDEIVKVIQ-AENYQAFRLA 133
Score = 34.9 bits (79), Expect = 0.008
Identities = 27/249 (10%), Positives = 64/249 (25%), Gaps = 48/249 (19%)
Query: 12 EDHKPIAIAIQIGDPQIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLLR 71
E+++ +A + G ++ L + A +
Sbjct: 125 ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLH--------- 175
Query: 72 LNLDFLKNVRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGADV 131
L+ L + + + + A A +G+ +++ LLD +
Sbjct: 176 -VLNRLCELAPTEATAMIQAENYYAF-----------RWAAVGRGHHNVINFLLDCPVML 223
Query: 132 NFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHAGKGARE---VN 188
A + + + + RH +
Sbjct: 224 A-------YAEIHEFEYGEKY-VNPFIARHVNRLK-----EMHDAFKLSNPDGVFDLVTK 270
Query: 189 TVLLYFIHEIFKLMANNDTTILDRLDEMKSLILEGTKEFGPGDYNNFSLLKVTKNDAGET 248
+ L + + L+ ND LD+++ L+ + D
Sbjct: 271 SECLQGFYMLRNLIRRNDE---VLLDDIRFLL-------SIPGIKALAPTATIPGD-ANE 319
Query: 249 ILDIAKKRG 257
+L +A + G
Sbjct: 320 LLRLALRLG 328
Score = 32.9 bits (74), Expect = 0.038
Identities = 13/124 (10%), Positives = 33/124 (26%), Gaps = 8/124 (6%)
Query: 10 PYEDHKPIAIAIQIGDPQIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDL 69
P + G+ + + H ++ + + + +L +
Sbjct: 220 PVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNP---DGVFDLVTKSECLQG 276
Query: 70 LRLNLDFLKNVRSNKYDEVK-----KNIEDGACINVSSERCGSALIYAAWKGYEEIVDLL 124
+ + ++ D+++ I+ A L A G + LL
Sbjct: 277 FYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALL 336
Query: 125 LDNG 128
L
Sbjct: 337 LSIP 340
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 57.4 bits (137), Expect = 3e-10
Identities = 33/192 (17%), Positives = 66/192 (34%), Gaps = 29/192 (15%)
Query: 16 PIAIAIQIGDPQIVKELQNHGAQIDK--EIYSKNKAAARIAHSALELEERKAINDLLR-- 71
P+ I + ++VK L HG+ + A + + + +A+ D L
Sbjct: 110 PLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC 169
Query: 72 -----------LNLDFLKNVRSNKYDEVKKNIE---------DGACINVSSERCGSALIY 111
L+ + + + K ++ I + S
Sbjct: 170 LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND 229
Query: 112 AAWKGYEEIVDLLLDN---GADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVV 168
+ + I++ L +N + + G T L++A R + SIV LL +GA +
Sbjct: 230 KNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAAR-LGNISIVDALLDYGADPFIA 288
Query: 169 DGKTGKTPLLHA 180
+ K+G P+
Sbjct: 289 N-KSGLRPVDFG 299
Score = 49.7 bits (117), Expect = 1e-07
Identities = 33/251 (13%), Positives = 81/251 (32%), Gaps = 20/251 (7%)
Query: 27 QIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLLRLNLDFLKNVRSNKYD 86
+I+K L + +++ R+ ++ ND N + + + ++
Sbjct: 20 KIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHV 79
Query: 87 EVKKNIEDGAC--------INVSSERCG-SALIYAAWKGYEEIVDLLLDNGADVNFKSAT 137
+++ +N+ + G + L + E+V L+ +G++ +
Sbjct: 80 SFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNM 139
Query: 138 GFTALHMACRFHD--DDSIVRKLLRHGAYYNVVDGKTGKTPLLHAGKGARE--VNTVLLY 193
G + L A + + D LL + +++ +T L H + + Y
Sbjct: 140 GESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKY 199
Query: 194 FIHEIFKLMANNDTTILDRLDEMKSLILEGTKEFGPGDYNNFSLLKV-------TKNDAG 246
++ + + + K LK ++ G
Sbjct: 200 YLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNG 259
Query: 247 ETILDIAKKRG 257
+T L+IA + G
Sbjct: 260 DTCLNIAARLG 270
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 56.4 bits (134), Expect = 3e-10
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 80 VRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGADVNFKSATGF 139
V +N V+ ++ GA +N SAL A+ +G +V L+ +GAD + K+
Sbjct: 152 VENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHND 211
Query: 140 TALHMACRFHDDDSIVR 156
T L +A D I+R
Sbjct: 212 TPLMVARSRRVID-ILR 227
Score = 47.9 bits (112), Expect = 3e-07
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
Query: 107 SALIYAAWKGYEEIVDLLLD----NGADVNFKSATGFTALHMACRFH 149
+ L A +G V L++ G +++ + T LH+A
Sbjct: 5 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITT 51
Score = 43.7 bits (101), Expect = 8e-06
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 109 LIYAAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVV 168
LI+A +V LLL +GA+VN + +G +ALH A +VR L+R GA ++
Sbjct: 148 LIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLP-LVRTLVRSGADSSLK 206
Query: 169 DGKTGKTPLLHA 180
+ TPL+ A
Sbjct: 207 N-CHNDTPLMVA 217
Score = 39.1 bits (89), Expect = 2e-04
Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 138 GFTALHMACRFHDDD---SIVRKLLRHGAYYNVVDGKTGKTPLLHA 180
G T LH+A + +V + G ++ + +TPL A
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYN-NLRQTPLHLA 47
Score = 25.2 bits (53), Expect = 8.5
Identities = 7/37 (18%), Positives = 10/37 (27%)
Query: 4 PYDPYVPYEDHKPIAIAIQIGDPQIVKELQNHGAQID 40
Y + A G +V+ L GA
Sbjct: 168 ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS 204
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 52.2 bits (123), Expect = 4e-09
Identities = 28/152 (18%), Positives = 51/152 (33%), Gaps = 9/152 (5%)
Query: 106 GSALIYAAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYY 165
G+ L AA +G E + LL N +VN ++ G TAL + + + + L
Sbjct: 2 GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDL 61
Query: 166 NVVDGKTGKTPLLHAGKGAREVNTVLLYFIHEIFKLMANNDTTILDRLDEMKSLILEGTK 225
G AG + + + A+ + + + EG
Sbjct: 62 KDRTGFAVIHDAARAGFL---------DTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHL 112
Query: 226 EFGPGDYNNFSLLKVTKNDAGETILDIAKKRG 257
+ + +N G+T D+A+ G
Sbjct: 113 RVVEFLVKHTASNVGHRNHKGDTACDLARLYG 144
Score = 35.6 bits (80), Expect = 0.002
Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 8/151 (5%)
Query: 19 IAIQIGDPQIVKELQNHGAQIDK------EIYSKNKAAARIAHSALELEERKAINDLLRL 72
A GD + + L + ++ K L L
Sbjct: 7 SAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKDRTG 66
Query: 73 NLDFLKNVRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYE-EIVDLLLDNGADV 131
R+ D ++ +E A +N+ L AA +G+ + L+ ++V
Sbjct: 67 FAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNV 126
Query: 132 NFKSATGFTALHMACRFHDDDSIVRKLLRHG 162
++ G TA +A + ++ +V + +G
Sbjct: 127 GHRNHKGDTACDLARLYGRNE-VVSLMQANG 156
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 49.5 bits (116), Expect = 4e-08
Identities = 29/152 (19%), Positives = 60/152 (39%), Gaps = 8/152 (5%)
Query: 15 KPIAIAIQIGDPQIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLLRLNL 74
K + A + G V+ L +GA + + + E + R
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63
Query: 75 DFLKNVRSNKYDE------VKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNG 128
+ + V+ ++ GA +N +AL +A ++E+V+LL+ G
Sbjct: 64 TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123
Query: 129 ADVNFKSATGFTALHMACRFHDDDSIVRKLLR 160
ADV+ +S TA ++ ++D + ++L+
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNED--LAEILQ 153
Score = 42.2 bits (97), Expect = 1e-05
Identities = 29/152 (19%), Positives = 47/152 (30%), Gaps = 10/152 (6%)
Query: 106 GSALIYAAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYY 165
G L+ AA G ++ V +L+ NGA G + LH+A ++ +
Sbjct: 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVL--LRAGVS 59
Query: 166 NVVDGKTGKTPLLHAGKGAREVNTVLLYFIHEIFKLMANNDTTILDRLDEMKSLILEGTK 225
K +TPL A +L T L E +
Sbjct: 60 RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELL 119
Query: 226 EFGPGDYNNFSLLKVTKNDAGETILDIAKKRG 257
D + T++ +T DI+ G
Sbjct: 120 IKYGADVH-------TQSKFCKTAFDISIDNG 144
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 49.1 bits (115), Expect = 1e-07
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 81 RSNKYDEVKKNIEDGACINVSSERCG-SALIYAAWKGYEEIVDLLLDNGADVNFKSATGF 139
V+ + GA +N G +AL A ++V LLL GADVN + G+
Sbjct: 120 IHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGY 179
Query: 140 TALHMACRFHDDDSIVRKLLRHGA 163
+ + I ++L +
Sbjct: 180 SPYQLTWGRPSTR-IQQQLGQLTL 202
Score = 47.2 bits (110), Expect = 4e-07
Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 107 SALIYAAWKGY----EEIVDLLLDNGADVNFKSATGFTALHMACRFH 149
S L A E++ + + A +NF++ T LH+A +
Sbjct: 4 SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITN 50
Score = 41.4 bits (95), Expect = 4e-05
Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 138 GFTALHMACRFHDDDS---IVRKLLRHGAYYNVVDGKTGKTPLLHA 180
G + LH+A + ++R++ A+ N + +TPL A
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQN-NLQQTPLHLA 46
Score = 36.4 bits (82), Expect = 0.002
Identities = 8/46 (17%), Positives = 15/46 (32%)
Query: 85 YDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGAD 130
D V ++ GA +N + + S + I L +
Sbjct: 158 PDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 28.3 bits (61), Expect = 0.94
Identities = 4/38 (10%), Positives = 13/38 (34%)
Query: 11 YEDHKPIAIAIQIGDPQIVKELQNHGAQIDKEIYSKNK 48
Y+ + P + +I ++L + + +
Sbjct: 176 YQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESED 213
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 49.0 bits (115), Expect = 1e-07
Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Query: 83 NKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGADVNFKSATGFTAL 142
N + V + A + ++ + L AA +G E LLDN A+
Sbjct: 134 NNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPR 193
Query: 143 HMACRFHDDDSIVRKL 158
+A D IVR L
Sbjct: 194 DVASERLHHD-IVRLL 208
Score = 46.3 bits (108), Expect = 9e-07
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 119 EIVDLLLDNGADVNFKS-ATGFTALHMACRFHDDDSIVRKLLRHGAYYN 166
+++ LL GA++N TG T+LH+A RF D ++LL GA N
Sbjct: 3 QVISDLLAQGAELNATMDKTGETSLHLAARFARAD-AAKRLLDAGADAN 50
Score = 33.6 bits (75), Expect = 0.015
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 154 IVRKLLRHGAYYNVVDGKTGKTPLLHA 180
++ LL GA N KTG+T L A
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLA 30
Score = 33.2 bits (74), Expect = 0.020
Identities = 8/38 (21%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 88 VKKNIEDGACINVSSERCG-SALIYAAWKGYEEIVDLL 124
+ + GA +N + ++ G ++L AA + L
Sbjct: 5 ISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRL 42
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 47.9 bits (112), Expect = 3e-07
Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Query: 108 ALIYAAWKGYEEIVDLLLD-NGADVNFKSATGFTALHMACRF 148
L A + V LL + + K G LH + F
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSF 44
Score = 47.5 bits (111), Expect = 4e-07
Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 97 CINVSSERCGSALIYAAWKGYEEIVDLLLDN-GADVNFKSATGFTALHMACRFHDDDSIV 155
+N ++ + L +A +G+ + LL++ GA+ + G A +A ++ +
Sbjct: 164 AVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL----NEQVK 219
Query: 156 RKLLRHGA 163
+ L +
Sbjct: 220 KFFLNNVV 227
Score = 39.0 bits (89), Expect = 2e-04
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 92 IEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGAD-VNFKSATGFTALHMACRFHD 150
IE+GA + + + L AA G ++++LL G VN++ G+T L A
Sbjct: 125 IENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGH 184
Query: 151 DDSIVRKLLRHGAYYNVVDGKTGKTPLLHA 180
D+ V + ++GA Y++VD G A
Sbjct: 185 GDAAVLLVEKYGAEYDLVD-NKGAKAEDVA 213
Score = 37.1 bits (84), Expect = 0.001
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 140 TALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHA 180
LH AC ++ + L + D + G+ PL +
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKD-QDGRIPLHWS 41
Score = 32.5 bits (72), Expect = 0.034
Identities = 8/36 (22%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Query: 95 GACINVSSERCGSALIYAAWKGYEEIVDLLLDNGAD 130
GA ++ + A A E++ L+N D
Sbjct: 196 GAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVVD 228
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 39.7 bits (91), Expect = 6e-05
Identities = 16/121 (13%), Positives = 36/121 (29%), Gaps = 35/121 (28%)
Query: 107 SALIYAAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDS------------- 153
+ L+ ++ +G ++V ++ D + + G TALH A +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 154 -------------------IVRKLLRHGAYYNVVDGKTGKTPL-LH--AGKGAREVNTVL 191
+ + L+ GA + +T +G + + L
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122
Query: 192 L 192
Sbjct: 123 Y 123
Score = 38.1 bits (87), Expect = 2e-04
Identities = 11/122 (9%), Positives = 28/122 (22%), Gaps = 10/122 (8%)
Query: 20 AIQIGDPQIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLLRLNLDFLKN 79
+ G+ +V+ + A + + + + +N
Sbjct: 8 SSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDG 67
Query: 80 VRSNKYDEVKKN-------IEDGACINVSSERCG---SALIYAAWKGYEEIVDLLLDNGA 129
N +E GA + + + +GY + L
Sbjct: 68 WTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQE 127
Query: 130 DV 131
+
Sbjct: 128 KM 129
Score = 26.6 bits (57), Expect = 2.3
Identities = 16/135 (11%), Positives = 47/135 (34%), Gaps = 14/135 (10%)
Query: 140 TALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHAGKGAREVNTVLLYFIHEIF 199
L + + +V++++ ++ + + G E+ L+ F +
Sbjct: 3 ALLLDSSL-EGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN 61
Query: 200 KLMANNDTTILDRLDEMKSLILEGTKEFGPGDYNNFSLLKVTKNDAGETILDIAK--KRG 257
++ T + + + E G ++ +T +D +T D + + G
Sbjct: 62 AADSDGWTPLHCAASCNNVQVCKFLVESGA------AVFAMTYSD-MQTAADKCEEMEEG 114
Query: 258 FP----LLEELEKKL 268
+ L +++K+
Sbjct: 115 YTQCSQFLYGVQEKM 129
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 39.6 bits (91), Expect = 1e-04
Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 12/123 (9%)
Query: 80 VRSNKYDEVKKNIEDGACINVS------SERCGSALIYAAW---KGYEEIVDLLLDNGAD 130
V++ + + DG + E +AL A + IVD L+ N +
Sbjct: 14 VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN 73
Query: 131 VNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHA-GKGAREVNT 189
++ ++ G TA C D+ ++ LLR A + + ++G+TPL A
Sbjct: 74 LDKQTGKGSTA-LHYCCLTDNAECLKLLLRGKASIEIAN-ESGETPLDIAKRLKHEHCEE 131
Query: 190 VLL 192
+L
Sbjct: 132 LLT 134
Score = 37.6 bits (86), Expect = 4e-04
Identities = 18/127 (14%), Positives = 38/127 (29%), Gaps = 16/127 (12%)
Query: 20 AIQIGDPQIVKELQNHGAQIDKEIYSKNKAA----ARIAHSALELEERKAINDLLR---- 71
A++ D + + G + ++I N A I D L
Sbjct: 13 AVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG 72
Query: 72 --------LNLDFLKNVRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDL 123
+ ++ + +K + A I +++E + L A +E +L
Sbjct: 73 NLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEEL 132
Query: 124 LLDNGAD 130
L +
Sbjct: 133 LTQALSG 139
Score = 36.1 bits (82), Expect = 0.001
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 8/64 (12%)
Query: 108 ALIYAAWKGYEEIVDLLLDNGADVNFK------SATGFTALHMACRFHDDDS--IVRKLL 159
+L A + +G D+ K TALH+A R D S IV L+
Sbjct: 9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLV 68
Query: 160 RHGA 163
++
Sbjct: 69 QNSG 72
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 38.3 bits (87), Expect = 3e-04
Identities = 13/47 (27%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 104 RCGSALIYAAWKGYEEIVDLLLD-NGADVNFKSATGFTALHMACRFH 149
R G L AA +G + V LL + + G TAL +
Sbjct: 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGS 47
Score = 37.9 bits (86), Expect = 4e-04
Identities = 31/149 (20%), Positives = 49/149 (32%), Gaps = 9/149 (6%)
Query: 20 AIQIGDPQIVKEL-QNHGAQID------KEIYSKNKAAARIAHSALELEERKAINDLLRL 72
A GD Q V+ L D K + L +
Sbjct: 9 AAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQDTSG 68
Query: 73 NLDFLKNVRSNKYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGADVN 132
R+ D +K +E GA +NV + A +G+ +V L +D++
Sbjct: 69 TSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH 127
Query: 133 FKSATGFTALHMACRFHDDDSIVRKLLRH 161
+ A G T L +A + D +V L H
Sbjct: 128 RRDARGLTPLELALQRGAQD-LVDILQGH 155
Score = 27.1 bits (58), Expect = 1.5
Identities = 9/39 (23%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 138 GFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTP 176
L A D + R L R + + ++ + GKT
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALN-RFGKTA 39
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 36.5 bits (82), Expect = 8e-04
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 103 ERCGSALIYAAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFH 149
E L AA +G E V LL+ GA+ N ++ G + +
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGS 47
Score = 34.5 bits (77), Expect = 0.003
Identities = 15/115 (13%), Positives = 31/115 (26%), Gaps = 7/115 (6%)
Query: 19 IAIQIGDPQIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLLRLNLDFLK 78
A G + V+ L GA + + + + + E ++ D
Sbjct: 9 TAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCADPAT 68
Query: 79 NVRSNKYDEVKKN-------IEDGACINVSSERCGSALIYAAWKGYEEIVDLLLD 126
R + GA ++V + A G+ ++ L
Sbjct: 69 LTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123
Score = 31.1 bits (68), Expect = 0.050
Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 140 TALHMACRFHDDDSIVRKLLRHGAYYN 166
L A + VR LL GA N
Sbjct: 5 DWLATAAARGRVE-EVRALLEAGANPN 30
Score = 27.2 bits (58), Expect = 1.2
Identities = 6/28 (21%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
Query: 132 NFKSATGFTALHMACRFHDDDSIVRKLL 159
+ + A G + +A D + R L
Sbjct: 96 DVRDAWGRLPVDLAEELGHRD-VARYLR 122
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 31.0 bits (68), Expect = 0.051
Identities = 12/45 (26%), Positives = 16/45 (35%)
Query: 105 CGSALIYAAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFH 149
C ++A G + V + G DVN G LH A
Sbjct: 2 CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCG 46
>d1jeya1 b.131.1.1 (A:254-534) Ku70 subunit middle domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 281
Score = 29.1 bits (65), Expect = 0.48
Identities = 26/149 (17%), Positives = 50/149 (33%), Gaps = 15/149 (10%)
Query: 134 KSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHAGKGAREVNTVL-- 191
S+T F+AL + C + ++ R R V + L L
Sbjct: 124 GSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGFQLVF 183
Query: 192 LYFIHEIFKLMANNDTTILDR-LDEMKSLILEGTKEFGPGDYNNFSLLKVTKN------- 243
L F + K+ + +MK+++ + + + N L + +N
Sbjct: 184 LPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALD 243
Query: 244 -DAGETILDIAKKRGFPLLEELEKKLAEL 271
E +D+ P +E + K+L L
Sbjct: 244 LMEPEQAVDLTL----PKVEAMNKRLGSL 268
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis
cinerea) [TaxId: 5346]}
Length = 150
Score = 26.0 bits (57), Expect = 3.6
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 125 LDNGAD---VNFKSATGFTALHMACRFHDDDSIVR 156
++ NF SA LH++ R ++ IV
Sbjct: 30 FNSKGGTTVFNFLSAGENILLHISIRP-GENVIVF 63
>d1ko7a1 c.98.2.1 (A:1-129) HPr kinase/phoshatase HprK N-terminal
domain {Staphylococcus xylosus [TaxId: 1288]}
Length = 129
Score = 25.7 bits (56), Expect = 3.6
Identities = 8/84 (9%), Positives = 30/84 (35%), Gaps = 6/84 (7%)
Query: 179 HAGKGAREVNTVLLYFIHEIFKLMANNDTTILDRLDEMKSL-ILEGTKEFGPGDYNNFSL 237
+ E+ ++ + +L+ + + + L + + + ++
Sbjct: 30 DISRPGLEMAGYFSHYASDRIQLLGTTELSFYNLLPDEERKGRMRKLCRPETP-----AI 84
Query: 238 LKVTKNDAGETILDIAKKRGFPLL 261
+ + E +++ AK+ PL+
Sbjct: 85 IVTRDLEPPEELIEAAKEHETPLI 108
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment
{Human (Homo sapiens) [TaxId: 9606]}
Length = 579
Score = 26.7 bits (58), Expect = 3.9
Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 21/141 (14%)
Query: 26 PQIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLLRLNLDFLKNVRSN-- 83
Q++ EL+ + ++D + K A +E + ++ LL L + V
Sbjct: 349 AQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAI 408
Query: 84 --------KYDEVKKNIEDGACINVSSERCGSALIYAAWKGYEEIVDLLLDNGADVNFKS 135
KY ++I C N+ S A W E +DN ++ +S
Sbjct: 409 VVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYA--ERIDNADEL-LES 465
Query: 136 ATGFTALHMACRFHDDDSIVR 156
FHD+ + V+
Sbjct: 466 --------FLEGFHDESTQVQ 478
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 584
Score = 26.7 bits (58), Expect = 4.1
Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Query: 27 QIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLLRLNLDFLKNVRSNKYD 86
QIV E+ ++ D I + + ++A A + + L+ ++ +
Sbjct: 396 QIVAEMLSYLETADYSI--REEIVLKVAILAEKYAV--DYTWYVDTILNLIRIAGDYVSE 451
Query: 87 EVKKNIED 94
EV +
Sbjct: 452 EVWYRVIQ 459
>d1hlca_ b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo sapiens)
[TaxId: 9606]}
Length = 129
Score = 25.2 bits (55), Expect = 5.6
Identities = 8/26 (30%), Positives = 11/26 (42%), Gaps = 1/26 (3%)
Query: 131 VNFKSATGFTALHMACRFHDDDSIVR 156
+N T LH RF + +IV
Sbjct: 30 INLGQGTDKLNLHFNPRF-SESTIVC 54
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 167
Score = 25.3 bits (54), Expect = 6.0
Identities = 13/60 (21%), Positives = 24/60 (40%)
Query: 25 DPQIVKELQNHGAQIDKEIYSKNKAAARIAHSALELEERKAINDLLRLNLDFLKNVRSNK 84
D Q L N +N++ R+ S +E R +++ L N + ++ R K
Sbjct: 108 DNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASMEARHRVSEALERNYERVRLRRLGK 167
>d2fi0a1 a.248.1.1 (A:3-81) Hypothetical protein SPr0485/SP0561
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 79
Score = 24.3 bits (53), Expect = 6.8
Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 7/60 (11%)
Query: 110 IYAAWKGYEEIVDLLLDNGAD-----VNFKSATGFTALHMACRFH--DDDSIVRKLLRHG 162
+ + E++++L++ G + + +L + D IVR L +G
Sbjct: 13 VAEVVDKHPEVLEILVELGFKPLANPLMRNTVGRKVSLKQGSKLAGTPMDKIVRTLEANG 72
>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase,
HppD {Streptomyces avermitilis [TaxId: 33903]}
Length = 163
Score = 25.2 bits (54), Expect = 7.2
Identities = 6/27 (22%), Positives = 10/27 (37%)
Query: 138 GFTALHMACRFHDDDSIVRKLLRHGAY 164
G + +A D + + HGA
Sbjct: 82 GDGVVDLAIEVPDARAAHAYAIEHGAR 108
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.137 0.394
Gapped
Lambda K H
0.267 0.0500 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,045,593
Number of extensions: 50365
Number of successful extensions: 410
Number of sequences better than 10.0: 1
Number of HSP's gapped: 339
Number of HSP's successfully gapped: 105
Length of query: 271
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 187
Effective length of database: 1,254,276
Effective search space: 234549612
Effective search space used: 234549612
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.4 bits)