BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8013
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P37287|PIGA_HUMAN Phosphatidylinositol N-acetylglucosaminyltransferase subunit A
OS=Homo sapiens GN=PIGA PE=1 SV=1
Length = 484
Score = 253 bits (647), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 153/193 (79%)
Query: 1 MVSDFFYPNVGGVEEHIFNLSQCLLQRGHKVIVLTHSYKDRVGIRYMTNGLKVYYCPIKT 60
MVSDFFYPN+GGVE HI+ LSQCL++RGHKVI++TH+Y +R GIRY+T+GLKVYY P+K
Sbjct: 37 MVSDFFYPNMGGVESHIYQLSQCLIERGHKVIIVTHAYGNRKGIRYLTSGLKVYYLPLKV 96
Query: 61 FYNQSILPTMVCSIPLVRHILLREEISIVHGHSAFSALAHETMMIARLLGLKTVFTDHSL 120
YNQS T+ S+PL+R+I +RE ++I+H HS+FSA+AH+ + A+ +GL+TVFTDHSL
Sbjct: 97 MYNQSTATTLFHSLPLLRYIFVRERVTIIHSHSSFSAMAHDALFHAKTMGLQTVFTDHSL 156
Query: 121 FGFADSSAIVTNKCLEISLAGCNHCICVSHIGKENTVLRARVNHYNVSVIPNAVDTTVFV 180
FGFAD S+++TNK L +SL NH ICVS+ KENTVLRA +N VSVIPNAVD T F
Sbjct: 157 FGFADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAVDPTDFT 216
Query: 181 PDVSRRSHNETLI 193
PD RR + T++
Sbjct: 217 PDPFRRHDSITIV 229
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 190 ETLIAGIESAISDLKNGRAISPFKCHETVKSLYNWVDVSERTEIVYKRVTQE 241
++L G+E AI LK+G +P H VK+ Y W +V+ERTE VY RV+ E
Sbjct: 353 KSLCEGLEKAIFQLKSGTLPAPENIHNIVKTFYTWRNVAERTEKVYDRVSVE 404
>sp|Q64323|PIGA_MOUSE N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein
OS=Mus musculus GN=Piga PE=2 SV=1
Length = 485
Score = 253 bits (647), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 117/186 (62%), Positives = 148/186 (79%)
Query: 1 MVSDFFYPNVGGVEEHIFNLSQCLLQRGHKVIVLTHSYKDRVGIRYMTNGLKVYYCPIKT 60
MVSDFFYPN+GGVE HI+ LSQCL++RGHKVI +TH+Y +R G+RY+TNGLKVYY P++
Sbjct: 37 MVSDFFYPNMGGVESHIYQLSQCLIERGHKVITVTHAYGNRKGVRYLTNGLKVYYLPLRV 96
Query: 61 FYNQSILPTMVCSIPLVRHILLREEISIVHGHSAFSALAHETMMIARLLGLKTVFTDHSL 120
YNQS T+ S+PL+R+I +RE I+I+H HS+FSA+AH+ + A+ +GL+TVFTDHSL
Sbjct: 97 MYNQSTATTLFHSLPLLRYIFVRERITIIHSHSSFSAMAHDALFHAKTMGLQTVFTDHSL 156
Query: 121 FGFADSSAIVTNKCLEISLAGCNHCICVSHIGKENTVLRARVNHYNVSVIPNAVDTTVFV 180
FGFAD S+++TNK L +SL NH ICVS+ KENTVLRA +N VSVIPNAVD T F
Sbjct: 157 FGFADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAVDPTDFT 216
Query: 181 PDVSRR 186
PD RR
Sbjct: 217 PDPFRR 222
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 190 ETLIAGIESAISDLKNGRAISPFKCHETVKSLYNWVDVSERTEIVYKRVTQE 241
++L G+E AI +K+G +P H VK+ Y W +V+ERTE VY+RV++E
Sbjct: 354 KSLCDGLEKAIFQVKSGTLPAPENIHNVVKTFYTWRNVAERTEKVYERVSKE 405
>sp|P87172|GPI3_SCHPO Phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=gpi3 PE=3 SV=1
Length = 456
Score = 221 bits (564), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/189 (57%), Positives = 139/189 (73%)
Query: 1 MVSDFFYPNVGGVEEHIFNLSQCLLQRGHKVIVLTHSYKDRVGIRYMTNGLKVYYCPIKT 60
MVSDFF+P GG+E HIF LSQ L+ GHKVIV+TH+YKDRVG+RY+TNGL VYY P+ T
Sbjct: 1 MVSDFFFPQPGGIESHIFQLSQRLIDLGHKVIVITHAYKDRVGVRYLTNGLTVYYVPLHT 60
Query: 61 FYNQSILPTMVCSIPLVRHILLREEISIVHGHSAFSALAHETMMIARLLGLKTVFTDHSL 120
Y ++ P+ P+ R+I++RE I IVHGH + S L H+ ++ AR +GLKT FTDHSL
Sbjct: 61 VYRETTFPSFFSFFPIFRNIVIRENIEIVHGHGSLSFLCHDAILHARTMGLKTCFTDHSL 120
Query: 121 FGFADSSAIVTNKCLEISLAGCNHCICVSHIGKENTVLRARVNHYNVSVIPNAVDTTVFV 180
FGFAD+ +IVTNK L+ +++ NH ICVSH +ENTVLRA +N VSVIPNA+ F
Sbjct: 121 FGFADAGSIVTNKLLKFTMSDVNHVICVSHTCRENTVLRAVLNPKRVSVIPNALVAENFQ 180
Query: 181 PDVSRRSHN 189
PD S+ S +
Sbjct: 181 PDPSKASKD 189
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 186 RSHNETLIAGIESAISDLKNGRAISPFKCHETVKSLYNWVDVSERTEIVYKRVTQEETKS 245
R + L + S I+D + + I HE VK +Y+W+DV+ERTE VY + E
Sbjct: 314 RPEEDDLADTLSSVITDYLDHK-IKTETFHEEVKQMYSWIDVAERTEKVYDSICSENNLR 372
Query: 246 VSEILK 251
+ + LK
Sbjct: 373 LIDRLK 378
>sp|A6ZW78|GPI3_YEAS7 Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit
OS=Saccharomyces cerevisiae (strain YJM789) GN=SPT14
PE=3 SV=1
Length = 452
Score = 194 bits (494), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 135/197 (68%), Gaps = 4/197 (2%)
Query: 1 MVSDFFYPNVGGVEEHIFNLSQCLLQRGHKVIVLTHSYKDRVGIRYMTNGLKVYYCPIKT 60
M+ DFFYP +GGVE HI++LSQ L+ GH V+++TH+YKDRVG+R++TNGLKVY+ P
Sbjct: 7 MLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRHLTNGLKVYHVPFFV 66
Query: 61 FYNQSILPTMVCSIPLVRHILLREEISIVHGHSAFSALAHETMMIARLLGLKTVFTDHSL 120
+ ++ PT+ + P++R+ILLRE+I IVH H + S AHE ++ A +GL+TVFTDHSL
Sbjct: 67 IFRETTFPTVFSTFPIIRNILLREQIQIVHSHGSASTFAHEGILHANTMGLRTVFTDHSL 126
Query: 121 FGFADSSAIVTNKCLEISLAGCNHCICVSHIGKENTVLRARVNHYNVSVIPNAVDTTVFV 180
+GF + ++I NK L +L + ICVS+ KEN ++R ++ +SVIPNAV + F
Sbjct: 127 YGFNNLTSIWVNKLLTFTLTNIDRVICVSNTCKENMIVRTELSPDIISVIPNAVVSEDFK 186
Query: 181 P----DVSRRSHNETLI 193
P D ++R + I
Sbjct: 187 PRDPTDSTKRKQSRDKI 203
Score = 34.3 bits (77), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 137 ISLAGCNHCICVSHIGKENTVLRARVNHYNVSVIPNAVDTTVFVPDVSRRSHNETLIAGI 196
+ A CN I + +G VL PN + TV+ + ++ L+
Sbjct: 296 VEAASCNLLIVTTQVGGIPEVL------------PN--EMTVY----AEQTSVSDLVQAT 337
Query: 197 ESAISDLKNGRAISPFKCHETVKSLYNWVDVSERTEIVYKRVTQEETKSVSEILK 251
AI+ +++ +A+ H++V +Y+W+DV++RT +Y ++ + + +K
Sbjct: 338 NKAINIIRS-KALDTSSFHDSVSKMYDWMDVAKRTVEIYTNISSTSSADDKDWMK 391
>sp|P32363|GPI3_YEAST Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SPT14 PE=1 SV=4
Length = 452
Score = 194 bits (493), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 129/181 (71%)
Query: 1 MVSDFFYPNVGGVEEHIFNLSQCLLQRGHKVIVLTHSYKDRVGIRYMTNGLKVYYCPIKT 60
M+ DFFYP +GGVE HI++LSQ L+ GH V+++TH+YKDRVG+R++TNGLKVY+ P
Sbjct: 7 MLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRHLTNGLKVYHVPFFV 66
Query: 61 FYNQSILPTMVCSIPLVRHILLREEISIVHGHSAFSALAHETMMIARLLGLKTVFTDHSL 120
+ ++ PT+ + P++R+ILLRE+I IVH H + S AHE ++ A +GL+TVFTDHSL
Sbjct: 67 IFRETTFPTVFSTFPIIRNILLREQIQIVHSHGSASTFAHEGILHANTMGLRTVFTDHSL 126
Query: 121 FGFADSSAIVTNKCLEISLAGCNHCICVSHIGKENTVLRARVNHYNVSVIPNAVDTTVFV 180
+GF + ++I NK L +L + ICVS+ KEN ++R ++ +SVIPNAV + F
Sbjct: 127 YGFNNLTSIWVNKLLTFTLTNIDRVICVSNTCKENMIVRTELSPDIISVIPNAVVSEDFK 186
Query: 181 P 181
P
Sbjct: 187 P 187
Score = 34.7 bits (78), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 137 ISLAGCNHCICVSHIGKENTVLRARVNHYNVSVIPNAVDTTVFVPDVSRRSHNETLIAGI 196
+ A CN I + +G VL PN + TV+ + ++ L+
Sbjct: 296 VEAASCNLLIVTTQVGGIPEVL------------PN--EMTVY----AEQTSVSDLVQAT 337
Query: 197 ESAISDLKNGRAISPFKCHETVKSLYNWVDVSERTEIVYKRVTQEETKSVSEILK 251
AI+ +++ +A+ H++V +Y+W+DV++RT +Y ++ + + +K
Sbjct: 338 NKAINIIRS-KALDTSSFHDSVSKMYDWMDVAKRTVEIYTNISSTSSADDKDWMK 391
>sp|B5VSZ6|GPI3_YEAS6 Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit
OS=Saccharomyces cerevisiae (strain AWRI1631) GN=SPT14
PE=3 SV=2
Length = 452
Score = 194 bits (493), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 129/181 (71%)
Query: 1 MVSDFFYPNVGGVEEHIFNLSQCLLQRGHKVIVLTHSYKDRVGIRYMTNGLKVYYCPIKT 60
M+ DFFYP +GGVE HI++LSQ L+ GH V+++TH+YKDRVG+R++TNGLKVY+ P
Sbjct: 7 MLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRHLTNGLKVYHVPFFV 66
Query: 61 FYNQSILPTMVCSIPLVRHILLREEISIVHGHSAFSALAHETMMIARLLGLKTVFTDHSL 120
+ ++ PT+ + P++R+ILLRE+I IVH H + S AHE ++ A +GL+TVFTDHSL
Sbjct: 67 IFRETTFPTVFSTFPIIRNILLREQIQIVHSHGSASTFAHEGILHANTMGLRTVFTDHSL 126
Query: 121 FGFADSSAIVTNKCLEISLAGCNHCICVSHIGKENTVLRARVNHYNVSVIPNAVDTTVFV 180
+GF + ++I NK L +L + ICVS+ KEN ++R ++ +SVIPNAV + F
Sbjct: 127 YGFNNLTSIWVNKLLTFTLTNIDRVICVSNTCKENMIVRTELSPDIISVIPNAVVSEDFK 186
Query: 181 P 181
P
Sbjct: 187 P 187
Score = 34.7 bits (78), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 137 ISLAGCNHCICVSHIGKENTVLRARVNHYNVSVIPNAVDTTVFVPDVSRRSHNETLIAGI 196
+ A CN I + +G VL PN + TV+ + ++ L+
Sbjct: 296 VEAASCNLLIVTTQVGGIPEVL------------PN--EMTVY----AEQTSVSDLVQAT 337
Query: 197 ESAISDLKNGRAISPFKCHETVKSLYNWVDVSERTEIVYKRVTQEETKSVSEILK 251
AI+ +++ +A+ H++V +Y+W+DV++RT +Y ++ + + +K
Sbjct: 338 NKAINIIRS-KALDTSSFHDSVSKMYDWMDVAKRTVEIYTNISSTSSADDKDWMK 391
>sp|B3LKQ3|GPI3_YEAS1 Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit
OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SPT14
PE=3 SV=1
Length = 452
Score = 194 bits (493), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 129/181 (71%)
Query: 1 MVSDFFYPNVGGVEEHIFNLSQCLLQRGHKVIVLTHSYKDRVGIRYMTNGLKVYYCPIKT 60
M+ DFFYP +GGVE HI++LSQ L+ GH V+++TH+YKDRVG+R++TNGLKVY+ P
Sbjct: 7 MLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRHLTNGLKVYHVPFFV 66
Query: 61 FYNQSILPTMVCSIPLVRHILLREEISIVHGHSAFSALAHETMMIARLLGLKTVFTDHSL 120
+ ++ PT+ + P++R+ILLRE+I IVH H + S AHE ++ A +GL+TVFTDHSL
Sbjct: 67 IFRETTFPTVFSTFPIIRNILLREQIQIVHSHGSASTFAHEGILHANTMGLRTVFTDHSL 126
Query: 121 FGFADSSAIVTNKCLEISLAGCNHCICVSHIGKENTVLRARVNHYNVSVIPNAVDTTVFV 180
+GF + ++I NK L +L + ICVS+ KEN ++R ++ +SVIPNAV + F
Sbjct: 127 YGFNNLTSIWVNKLLTFTLTNIDRVICVSNTCKENMIVRTELSPDIISVIPNAVVSEDFK 186
Query: 181 P 181
P
Sbjct: 187 P 187
Score = 34.7 bits (78), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 137 ISLAGCNHCICVSHIGKENTVLRARVNHYNVSVIPNAVDTTVFVPDVSRRSHNETLIAGI 196
+ A CN I + +G VL PN + TV+ + ++ L+
Sbjct: 296 VEAASCNLLIVTTQVGGIPEVL------------PN--EMTVY----AEQTSVSDLVQAT 337
Query: 197 ESAISDLKNGRAISPFKCHETVKSLYNWVDVSERTEIVYKRVTQEETKSVSEILK 251
AI+ +++ +A+ H++V +Y+W+DV++RT +Y ++ + + +K
Sbjct: 338 NKAINIIRS-KALDTSSFHDSVSKMYDWMDVAKRTVEIYTNISSTSSADDKDWMK 391
>sp|O06423|MGTA_MYCTU GDP-mannose-dependent alpha-mannosyltransferase OS=Mycobacterium
tuberculosis GN=mgtA PE=1 SV=1
Length = 378
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 1 MVSDFFYPNVGGVEEHIFNLSQCLLQRGHKVIVL---THSYKDRVGIRYMTNGLKVYYCP 57
+V++ F P V GV + + + L + GH+ +V+ T +DR + +G++V+ P
Sbjct: 8 IVAESFLPQVNGVSNSVVKVLEHLRRTGHEALVIAPDTPPGEDRA--ERLHDGVRVHRVP 65
Query: 58 IKTFYNQSILPTMVCSIPLVRHILLREEISIVHGHSAFSALAHETMMIARLLGLKTVFTD 117
+ F + LP V + ++R L + +VH S + L + + AR LG+ TV
Sbjct: 66 SRMFPKVTTLPLGVPTFRMLR-ALRGFDPDVVHLASP-ALLGYGGLHAARRLGVPTVAVY 123
Query: 118 HS-LFGFADSSAI 129
+ + GFA S I
Sbjct: 124 QTDVPGFASSYGI 136
>sp|A0QRG8|MGTA_MYCS2 GDP-mannose-dependent alpha-mannosyltransferase OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=mgtA PE=3
SV=1
Length = 375
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 1 MVSDFFYPNVGGVEEHIFNLSQCLLQRGHKVIVLT-HSYKDRVGIRYMTNGLKVYYCPIK 59
+V++ F PNV GV + + L + GH+V+V+ + + + + +G++V+ P +
Sbjct: 5 IVAESFLPNVNGVTNSVLRVIDHLRRTGHEVLVIAPDTPRGQPPADRIHDGVRVHRVPSR 64
Query: 60 TFYNQSILPTMVCSIPLVRHILLREEISIVHGHSAFSALAHETMMIARLLGLKTVFT-DH 118
F + LP V P + +L + +VH S + L + + AR LG+ +V
Sbjct: 65 MFPKITSLPLGVPR-PRMIGVLRGFDPDVVHLASP-ALLGYGGLHAARHLGVPSVAVFQT 122
Query: 119 SLFGFADS 126
+ GFA+S
Sbjct: 123 DVAGFAES 130
>sp|Q48454|YC08_KLEPN Uncharacterized 42.6 kDa protein in cps region OS=Klebsiella
pneumoniae PE=4 SV=1
Length = 373
Score = 37.4 bits (85), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MVSDFFYP-NVGGVEEHIFNLSQCLLQRGHKVIVLT-HSYKDRVGIRYMTNGLKVYYCPI 58
+V+ +YP +GG E + L++ L+++GH V V++ H + +R + NG+K+ Y P
Sbjct: 5 LVNTLYYPYKIGGAEVSVQILAESLIEKGHSVTVVSIHEHNERKDTEH--NGVKIIYLPY 62
Query: 59 KTFY 62
Y
Sbjct: 63 SNIY 66
>sp|O53279|GLGSY_MYCTU Glycogen synthase OS=Mycobacterium tuberculosis GN=Rv3032 PE=1 SV=1
Length = 414
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 32/143 (22%)
Query: 1 MVSDFFYPNV--GGVEEHIFNLSQCLLQRGHKVIVL----------THSYKDRVGIRYMT 48
MVS + YP V GG+ H+ +LS L GH V+VL TH D V T
Sbjct: 5 MVS-WEYPPVVIGGLGRHVHHLSTALAAAGHDVVVLSRCPSGTDPSTHPSSDEV-----T 58
Query: 49 NGLKVYYCPIK----TFYNQSILPTMVCSIPLVRHILLREEIS--------IVHGHSAFS 96
G++V TF N + T+ ++R L +++ +VH H
Sbjct: 59 EGVRVIAAAQDPHEFTFGNDMMAWTLAMGHAMIRAGLRLKKLGTDRSWRPDVVHAHDWL- 117
Query: 97 ALAHETMMIARLLGLKTVFTDHS 119
+AH + +A+ + V T H+
Sbjct: 118 -VAHPAIALAQFYDVPMVSTIHA 139
>sp|B1YJZ8|SYFA_EXIS2 Phenylalanine--tRNA ligase alpha subunit OS=Exiguobacterium
sibiricum (strain DSM 17290 / JCM 13490 / 255-15)
GN=pheS PE=3 SV=1
Length = 340
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 19/147 (12%)
Query: 13 VEEHIFNLSQCLLQRGHKVIVLTHSY--KDRVGIRYMTNGLKVY------------YCPI 58
VE+ +FN L + H + S+ D + +R T+ ++ CP
Sbjct: 134 VEQDLFNFEMLNLPKDHPARDMQDSFYITDEILMRTHTSPVQARTMLASKGEPIRILCPG 193
Query: 59 KTFYNQSILPTMVCSIPLVRHILLREEISIVHGHSAFSALAHETMMIARLLGLKTVFTDH 118
K + T V +++ EEIS+ A + AR + L+ F
Sbjct: 194 KVYRRDEDDATHSHQFMQVEGLVVGEEISMADLKGTLEAFVKQMFGEAREIRLRPSF--- 250
Query: 119 SLFGFADSSAIVTNKCLEISLAGCNHC 145
F F + S V C + GCN C
Sbjct: 251 --FPFTEPSVEVDVSCFKCGGKGCNIC 275
>sp|Q6LUJ8|FTSH_PHOPR ATP-dependent zinc metalloprotease FtsH OS=Photobacterium profundum
GN=ftsH PE=3 SV=1
Length = 696
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 31/196 (15%)
Query: 70 MVCSIPLVRHILLREEISIVHGHSAFSALAHETMMIARL------LGLKTVFTDHSLFGF 123
+V +P VR RE+I VH E +IAR L + + +LF
Sbjct: 344 VVVGLPDVRG---REQILKVHMRKVPLEGDVEPSLIARGTPGFSGADLANLVNEAALFAA 400
Query: 124 ADSSAIVTNKCLEIS-----LAGCNHCICVSHIGKENT---------VLRARVNH---YN 166
+ +V+ + E++ + + +S KE+T + R +H Y
Sbjct: 401 RGNKRVVSMQEFELAKDKIMMGAERKSMVMSEDQKESTAYHEAGHAIIGRLVPDHDPVYK 460
Query: 167 VSVIPN--AVDTTVFVPDVSRRSHNETLIAGIESAISDLKNGRAISPFKCHETVKSLYNW 224
VS+IP A+ T+++P+ R SH+ +ES +S L GR S
Sbjct: 461 VSIIPRGRALGVTMYLPEKDRISHSREF---LESMLSSLYGGRLAEELIYGVDKVSTGAS 517
Query: 225 VDVSERTEIVYKRVTQ 240
D+ T+I K VTQ
Sbjct: 518 NDIERATDIARKMVTQ 533
>sp|B2HP18|PCP_MYCMM Pyrrolidone-carboxylate peptidase OS=Mycobacterium marinum (strain
ATCC BAA-535 / M) GN=pcp PE=3 SV=1
Length = 222
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 142 CNHCI--CVSHIGKENTVLRARVNHYNVSVIPNAVDTTVFVPDVSRRSHNETLIAGIESA 199
CNH + + HI +N +RA H + A+D + VP +S + L+AGIE+A
Sbjct: 146 CNHLMYGVLHHIATQNLPIRAGWVHLPCLPMVAALDRNLGVPSMSVETAVAGLVAGIEAA 205
Query: 200 ISDLKNGRAISPFKCH 215
+ + R P +
Sbjct: 206 VQHSADTREPVPSRLQ 221
>sp|B2VK11|ADD_ERWT9 Adenosine deaminase OS=Erwinia tasmaniensis (strain DSM 17950 /
Et1/99) GN=add PE=3 SV=1
Length = 332
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 57 PIKTFYNQSILPTMVCSIPLVRHILLREEISIVHGHSAFSALAHETMMIARLLGLKTVF 115
P+KTF N IL T+ P V+ I + E H + + L+ + M +A+ GLK F
Sbjct: 262 PLKTFLNHGILATINTDDPAVQGIEIEHE---YHVAAPAAGLSVQQMRVAQENGLKIAF 317
>sp|A0QWG6|PIMA_MYCS2 GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol
mannosyltransferase OS=Mycobacterium smegmatis (strain
ATCC 700084 / mc(2)155) GN=pimA PE=1 SV=1
Length = 386
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 1 MVSDFFYPNVGGVEEHIFNLSQCLLQRGHKVIVLTHSYKDRVGIRYMTNGLKVYYCPIKT 60
MV + + GGV+ H+ L++ L GH+V VL + Y+ +G K P
Sbjct: 5 MVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIP--- 61
Query: 61 FYNQSI 66
YN S+
Sbjct: 62 -YNGSV 66
>sp|A8FDV4|IOLA_BACP2 Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus
pumilus (strain SAFR-032) GN=iolA PE=3 SV=1
Length = 486
Score = 32.0 bits (71), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 155 NTVLRARVNHYNVSVIPNAVDTTVFVPDVSRRSHNETLI----AGIESAISDLKNGRAIS 210
+ +++ V+ N VI N ++ VF+ V R H E + +GIE S +++GR
Sbjct: 300 DDLIQKLVDESNELVIGNGINEEVFLGPVIREEHKERTLQYIQSGIEEGASLIRDGR--- 356
Query: 211 PFKCHETVKSLY 222
K HET Y
Sbjct: 357 --KDHETNGKGY 366
>sp|O74412|CBF12_SCHPO Transcription factor cbf12 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=cbf12 PE=2 SV=1
Length = 963
Score = 30.8 bits (68), Expect = 9.2, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 159 RARVNHYNVSVIPNAVDTTVFVPDVSRRSHNETLIAGIESAISDLKNGRAISPFKCHETV 218
R++V N+ +I + T V P + + H+ ++ A S+ N + F+CHET
Sbjct: 724 RSKVLCSNMVIILVSKITGVQSPPLILKKHDNWKVSLSSRAPSEAINCLSKLAFQCHETK 783
Query: 219 KSLYNWVDVSERTEIVYKRVTQE------ETKSVSEILKW 252
+ LY +D + +EI + E TK+ +L W
Sbjct: 784 RFLY--IDEKQSSEISFTSGELEYSDPNDPTKATHSVLPW 821
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,095,137
Number of Sequences: 539616
Number of extensions: 3278917
Number of successful extensions: 8278
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 8264
Number of HSP's gapped (non-prelim): 30
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)