BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8015
(165 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P22062|PIMT_RAT Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus
norvegicus GN=Pcmt1 PE=1 SV=2
Length = 227
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 76 LIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDT-KQQMLTIYDKF 134
++ DGR F + PYDAIHVGAA P P+ I LK GGRL++P+G QML YDK
Sbjct: 139 VVGDGRMGFAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKL 198
Query: 135 HNGTIDIQ 142
+G++ ++
Sbjct: 199 QDGSVKMK 206
>sp|P22061|PIMT_HUMAN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Homo
sapiens GN=PCMT1 PE=1 SV=4
Length = 227
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 76 LIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDT-KQQMLTIYDKF 134
++ DGR + + PYDAIHVGAA P P+ I LK GGRL++P+G QML YDK
Sbjct: 139 VVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKL 198
Query: 135 HNGTIDIQ 142
+G+I ++
Sbjct: 199 QDGSIKMK 206
>sp|Q5F3N1|PIMT_CHICK Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus
gallus GN=PCMT1 PE=2 SV=3
Length = 228
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 76 LIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDT-KQQMLTIYDKF 134
++ DGR + + PYDAIHVGAA P P+ I LK GGRL++P+G QML YDK
Sbjct: 139 IVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKL 198
Query: 135 HNGTIDIQ 142
+G++ ++
Sbjct: 199 EDGSVKMK 206
>sp|Q4R5H0|PIMT_MACFA Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Macaca
fascicularis GN=PCMT1 PE=2 SV=3
Length = 227
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 76 LIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDT-KQQMLTIYDKF 134
++ DGR + + PYDAIHVGAA P P+ I LK GGRL++P+G QML YDK
Sbjct: 139 VVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKL 198
Query: 135 HNGTIDIQ 142
+G++ ++
Sbjct: 199 QDGSVKMK 206
>sp|P23506|PIMT_MOUSE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus
musculus GN=Pcmt1 PE=1 SV=3
Length = 227
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 76 LIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDT-KQQMLTIYDKF 134
++ DGR + + PYDAIHVGAA P P+ I LK GGRL++P+G QML YDK
Sbjct: 139 VVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKL 198
Query: 135 HNGTIDIQ 142
+G++ ++
Sbjct: 199 QDGSVKMK 206
>sp|P80895|PIMT_PIG Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus
scrofa GN=PCMT1 PE=1 SV=3
Length = 227
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 76 LIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDT-KQQMLTIYDKF 134
++ DGR + + PYDAIHVGAA P P+ I LK GGRL++P+G QML YDK
Sbjct: 139 VVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKL 198
Query: 135 HNGTIDIQ 142
+G++ ++
Sbjct: 199 QDGSVKMK 206
>sp|Q5RA89|PIMT_PONAB Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Pongo
abelii GN=PCMT1 PE=2 SV=3
Length = 227
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 76 LIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDT-KQQMLTIYDKF 134
++ DGR + + PYDAIHVGAA P P+ I LK GGRL++P+G QML YDK
Sbjct: 139 VVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKL 198
Query: 135 HNGTIDIQ 142
+G++ ++
Sbjct: 199 QDGSVKMK 206
>sp|Q92047|PIMT_DANRE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio
rerio GN=pcmt PE=2 SV=3
Length = 228
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 76 LIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDT-KQQMLTIYDKF 134
++ DGR F + PYDAIHVGAA P P+ + LK GGRL++P+G QML YDK
Sbjct: 139 IVGDGRMGFTEEAPYDAIHVGAAAPTVPQALLDQLKPGGRLILPVGPAGGNQMLEQYDKL 198
Query: 135 HNGTIDIQ 142
+G+ ++
Sbjct: 199 EDGSTKMK 206
>sp|Q42539|PIMT_ARATH Protein-L-isoaspartate O-methyltransferase OS=Arabidopsis thaliana
GN=PCM PE=2 SV=3
Length = 230
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 77 IADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFHN 136
+ DGR + + PYDAIHVGAA P PE I LK GGRLVIP+G+ Q L + DK +
Sbjct: 146 VGDGRQGWAEFAPYDAIHVGAAAPEIPEALIDQLKPGGRLVIPVGNIFQD-LQVVDKNSD 204
Query: 137 GTIDIQ 142
G++ I+
Sbjct: 205 GSVSIK 210
>sp|P15246|PIMT_BOVIN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos
taurus GN=PCMT1 PE=1 SV=2
Length = 227
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 76 LIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDT-KQQMLTIYDKF 134
++ DGR + PYDAIHVGAA P P+ I LK GGRL++P+G QML YDK
Sbjct: 139 VVGDGRMGYAAEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKL 198
Query: 135 HNGTIDIQ 142
+G++ ++
Sbjct: 199 QDGSVKMK 206
>sp|Q43209|PIMT_WHEAT Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum
GN=PCM PE=1 SV=1
Length = 230
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 77 IADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFHN 136
++DGR + D PYDAIHVGAA P P + LK GGR+VIP+G T Q L + DK +
Sbjct: 146 VSDGRLGWPDAAPYDAIHVGAAAPEIPRPLLEQLKPGGRMVIPVG-TYSQDLQVIDKSAD 204
Query: 137 GTIDIQH 143
G+ +++
Sbjct: 205 GSTSVRN 211
>sp|Q27869|PIMT_DROME Protein-L-isoaspartate(D-aspartate) O-methyltransferase
OS=Drosophila melanogaster GN=Pcmt PE=1 SV=2
Length = 226
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIG-DTKQQMLTIYDKFHNG 137
DGR + N PY+AIHVGAA P P I+ L SGGRL++P+G D Q + YDK NG
Sbjct: 147 DGRKGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANG 206
Query: 138 TIDIQH-WGVVQVGL 151
+++ GV+ V L
Sbjct: 207 KVEMTRLMGVMYVPL 221
>sp|O27962|PIMT2_ARCFU Protein-L-isoaspartate O-methyltransferase 2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=pcm2 PE=3 SV=1
Length = 219
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 76 LIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFH 135
++ DG + PYD I+V AA P P+ I LK GR+VIP+GD+ Q L I +K
Sbjct: 132 IVGDGSKGYEKEAPYDKIYVTAAAPDIPKPLIEQLKPRGRMVIPVGDS-VQWLIIVEKDE 190
Query: 136 NGTIDIQHWGVVQ 148
+G + ++WG V+
Sbjct: 191 SGNVRKKNWGSVR 203
>sp|A3QC83|PIMT_SHELP Protein-L-isoaspartate O-methyltransferase OS=Shewanella loihica
(strain ATCC BAA-1088 / PV-4) GN=pcm PE=3 SV=2
Length = 211
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIY---DKFH 135
DG + + GP+DAI V AA P+ + L GG LVIP+G+ QQ++ + D+FH
Sbjct: 134 DGWQGWANKGPFDAIMVTAAASSVPQALLQQLADGGVLVIPVGEETQQLMRVVRMGDQFH 193
Query: 136 NGTIDI 141
+ TI++
Sbjct: 194 SQTIEM 199
>sp|Q2SKW3|PIMT_HAHCH Protein-L-isoaspartate O-methyltransferase OS=Hahella chejuensis
(strain KCTC 2396) GN=pcm PE=3 SV=1
Length = 211
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 77 IADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDK 133
++DGR + + GP+DAI V AA + P + L GGRLVIP+G +QML +Y +
Sbjct: 131 LSDGRWGWPEQGPFDAIMVTAAPEQTPSELLEQLADGGRLVIPVGSGSEQMLKVYKR 187
>sp|B4SR93|PIMT_STRM5 Protein-L-isoaspartate O-methyltransferase OS=Stenotrophomonas
maltophilia (strain R551-3) GN=pcm PE=3 SV=1
Length = 225
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 64 LSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDT 123
L I HD DGR + ++GP+DAI V AA P ++ I L GGRLV P+G
Sbjct: 136 LGMNIRTKHD-----DGRVGWAEHGPFDAIVVTAAAPALVDVLIEQLAEGGRLVAPVGGP 190
Query: 124 KQQMLTIYDKFHNGTIDIQH 143
Q L D+ +G+I+ QH
Sbjct: 191 SAQSLVQLDRRADGSIE-QH 209
>sp|Q74CZ5|PIMT_GEOSL Protein-L-isoaspartate O-methyltransferase OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=pcm PE=3 SV=2
Length = 207
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 77 IADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFHN 136
++DG + D P+DAI V A P P+ +I LK GGRLVIP+G +Q+L K +
Sbjct: 122 MSDGTVGWEDEAPFDAIIVTAGAPDIPQQYIDQLKPGGRLVIPVGTQFEQVLVRVVKQED 181
Query: 137 GTIDIQH 143
G+++ ++
Sbjct: 182 GSVEREN 188
>sp|B7VK62|PIMT_VIBSL Protein-L-isoaspartate O-methyltransferase OS=Vibrio splendidus
(strain LGP32) GN=pcm PE=3 SV=1
Length = 208
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIY---DKFH 135
DG + P+DAI V AA P+ + LK GGRL+IP+GD +QQ+L I D+F
Sbjct: 131 DGWQGWSSKAPFDAIIVTAAAESIPQALLQQLKDGGRLLIPVGDDEQQLLKIVRHGDEFL 190
Query: 136 NGTIDI 141
+ I++
Sbjct: 191 SSVIEM 196
>sp|B3E6I4|PIMT_GEOLS Protein-L-isoaspartate O-methyltransferase OS=Geobacter lovleyi
(strain ATCC BAA-1151 / DSM 17278 / SZ) GN=pcm PE=3 SV=1
Length = 217
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%)
Query: 77 IADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFHN 136
+ DG + + GP+DAI V A P PE L GGRLVIP+GD Q L K +
Sbjct: 132 VGDGTLGWPEEGPFDAILVTAGAPAVPETLAAQLAPGGRLVIPVGDESNQTLLRIRKAAD 191
Query: 137 GTI 139
GT+
Sbjct: 192 GTL 194
>sp|Q8TYL4|PIMT_METKA Protein-L-isoaspartate O-methyltransferase OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pcm
PE=3 SV=1
Length = 226
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 76 LIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFH 135
L+ DG + PYD I V A P PE + LK GG++VIP+GD Q L + +K
Sbjct: 139 LVGDGTKGYPPEAPYDRILVTAGAPDVPESLLEQLKPGGKMVIPVGDRHMQELWLVEKTE 198
Query: 136 NGTIDIQHWG 145
+G I + G
Sbjct: 199 DGEIRRRRHG 208
>sp|B6EKL2|PIMT_ALISL Protein-L-isoaspartate O-methyltransferase OS=Aliivibrio
salmonicida (strain LFI1238) GN=pcm PE=3 SV=1
Length = 208
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 78 ADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIY---DKF 134
ADG + P+DAI V AA P ++ LK GGRLVIPIG QQ+L I D+F
Sbjct: 130 ADGWNGWPSKSPFDAIIVTAAAESIPNDLLYQLKEGGRLVIPIGTESQQLLRITRHGDEF 189
Query: 135 HNGTID 140
H+ I+
Sbjct: 190 HSEVIE 195
>sp|Q87LQ6|PIMT_VIBPA Protein-L-isoaspartate O-methyltransferase OS=Vibrio
parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
GN=pcm PE=3 SV=1
Length = 208
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDK 133
DG + GP+DAI V AA P+ + LK GG++VIP+GD +QQ+L I K
Sbjct: 131 DGWLGWETKGPFDAIIVTAAAEVIPQALLSQLKDGGKMVIPVGDAEQQLLRIERK 185
>sp|B2FK95|PIMT_STRMK Protein-L-isoaspartate O-methyltransferase OS=Stenotrophomonas
maltophilia (strain K279a) GN=pcm PE=3 SV=1
Length = 225
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 64 LSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDT 123
L I HD DGRA + ++GP+DAI V AA P + + L GGRLV P+G
Sbjct: 136 LGMNIRTKHD-----DGRAGWAEHGPFDAIVVTAAAPALVDELVGQLAEGGRLVAPVGGP 190
Query: 124 KQQMLTIYDKFHNGTID 140
Q L D+ +G+I+
Sbjct: 191 GGQSLVQLDRRADGSIE 207
>sp|A1S4E3|PIMT_SHEAM Protein-L-isoaspartate O-methyltransferase OS=Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B) GN=pcm PE=3
SV=1
Length = 211
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDK 133
DG + + GP+DAI V AA P + L GGRL+IP+G+ QQ+L I K
Sbjct: 134 DGWLGWPNRGPFDAIMVTAAAASLPTALLEQLSEGGRLIIPVGEDAQQLLAITRK 188
>sp|Q9UXX0|PIMT_PYRAB Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=pcm PE=3 SV=2
Length = 216
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 76 LIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGD--TKQQMLTIYDK 133
++ DG F PYD I V A P+ PE + LK GGRL+IP+G Q++L + K
Sbjct: 131 ILGDGSKGFPPKAPYDVIIVTAGAPKVPEPLVEQLKPGGRLIIPVGSYHLWQELLEVVKK 190
Query: 134 FHNGTIDIQ-HWGVVQVGLL 152
+G I ++ H GV V L+
Sbjct: 191 -KSGEIKVRNHGGVAFVPLI 209
>sp|A5CYQ6|PIMT_PELTS Protein-L-isoaspartate O-methyltransferase OS=Pelotomaculum
thermopropionicum (strain DSM 13744 / JCM 10971 / SI)
GN=pcm PE=3 SV=1
Length = 229
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 40 STTLPTFIPNSFNINVYYYLSGGPLS--STIDPDHDYDLIADGRASFGDNGPYDAIHVGA 97
+ L + + I + L+ G S ++ D+ Y DG + + P+D I V A
Sbjct: 105 AAVLSRIVSVVYTIERFDSLARGARSLFQSLKYDNIYVRTGDGTKGWPEAAPFDGIIVSA 164
Query: 98 AYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFHNGTIDIQHWGVV 147
P P+ LK GGRLV P+GD + Q L + + +G +++ G V
Sbjct: 165 GAPAVPQTLCGQLKPGGRLVAPVGDKRWQELLVVRRALDGGYNVKKLGTV 214
>sp|B4RZG8|PIMT_ALTMD Protein-L-isoaspartate O-methyltransferase OS=Alteromonas macleodii
(strain DSM 17117 / Deep ecotype) GN=pcm1 PE=3 SV=1
Length = 211
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTI 130
DG + GPYDAI V AA P+ LK GGRL+IP+G+ +Q +L I
Sbjct: 134 DGWKGWASKGPYDAIIVTAAAASLPQDLCDQLKEGGRLIIPVGNEQQSLLCI 185
>sp|A0LL58|PIMT1_SYNFM Protein-L-isoaspartate O-methyltransferase 1 OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=pcm1 PE=3 SV=1
Length = 214
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 77 IADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFHN 136
+ADG + D P+DAI V A P+ P+ + L GGRLV+P+GD Q L + +
Sbjct: 132 VADGTLGWPDEAPFDAILVTAGTPKIPQPLLDQLAEGGRLVVPVGDRLAQELVLVESGPE 191
Query: 137 G 137
G
Sbjct: 192 G 192
>sp|A7MTT6|PIMT_VIBHB Protein-L-isoaspartate O-methyltransferase OS=Vibrio harveyi
(strain ATCC BAA-1116 / BB120) GN=pcm PE=3 SV=1
Length = 208
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTI 130
DG + GP+DAI V AA P+ + LK GG+++IP+G+ +QQ+L I
Sbjct: 131 DGWLGWEAKGPFDAIIVTAAAESVPQALLSQLKEGGKMIIPVGEEEQQLLKI 182
>sp|Q5GYL2|PIMT_XANOR Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas oryzae
pv. oryzae (strain KACC10331 / KXO85) GN=pcm PE=3 SV=1
Length = 225
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFHNGT 138
DGR + ++GPYDAI V AA P + + L GGRLV P+G Q L + +GT
Sbjct: 146 DGRIGWHEHGPYDAIVVTAAAPALVDALVDQLAVGGRLVAPVGGASSQSLVQLTRGADGT 205
Query: 139 IDIQ 142
I+ Q
Sbjct: 206 IEQQ 209
>sp|B2SUB3|PIMT_XANOP Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas oryzae
pv. oryzae (strain PXO99A) GN=pcm PE=3 SV=1
Length = 225
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFHNGT 138
DGR + ++GPYDAI V AA P + + L GGRLV P+G Q L + +GT
Sbjct: 146 DGRIGWHEHGPYDAIVVTAAAPALVDALVDQLAVGGRLVAPVGGASSQSLVQLTRGADGT 205
Query: 139 IDIQ 142
I+ Q
Sbjct: 206 IEQQ 209
>sp|Q2P1L5|PIMT_XANOM Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas oryzae
pv. oryzae (strain MAFF 311018) GN=pcm PE=3 SV=1
Length = 225
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFHNGT 138
DGR + ++GPYDAI V AA P + + L GGRLV P+G Q L + +GT
Sbjct: 146 DGRIGWHEHGPYDAIVVTAAAPALVDALVDQLAVGGRLVAPVGGASSQSLVQLTRGADGT 205
Query: 139 IDIQ 142
I+ Q
Sbjct: 206 IEQQ 209
>sp|A6WR22|PIMT_SHEB8 Protein-L-isoaspartate O-methyltransferase OS=Shewanella baltica
(strain OS185) GN=pcm PE=3 SV=1
Length = 211
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTI---YDKFH 135
DG + + P+DAI V AA PE + L GG LV+P+G+ QQ++ I D+F
Sbjct: 134 DGWLGWANRSPFDAIMVTAAASTIPEALLSQLAEGGVLVLPVGEDTQQLMRITRTADRFS 193
Query: 136 NGTID 140
+ TI+
Sbjct: 194 SETIE 198
>sp|A3D789|PIMT_SHEB5 Protein-L-isoaspartate O-methyltransferase OS=Shewanella baltica
(strain OS155 / ATCC BAA-1091) GN=pcm PE=3 SV=1
Length = 211
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTI---YDKFH 135
DG + + P+DAI V AA PE + L GG LV+P+G+ QQ++ I D+F
Sbjct: 134 DGWLGWANRSPFDAIMVTAAASTIPEALLSQLAEGGVLVLPVGEDTQQLMRITRTADRFS 193
Query: 136 NGTID 140
+ TI+
Sbjct: 194 SETIE 198
>sp|B8E8T7|PIMT_SHEB2 Protein-L-isoaspartate O-methyltransferase OS=Shewanella baltica
(strain OS223) GN=pcm PE=3 SV=1
Length = 211
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTI---YDKFH 135
DG + + P+DAI V AA PE + L GG LV+P+G+ QQ++ I D+F
Sbjct: 134 DGWLGWANRSPFDAIMVTAAASTIPEALLSQLAEGGVLVLPVGEDTQQLMRITRTADRFS 193
Query: 136 NGTID 140
+ TI+
Sbjct: 194 SETIE 198
>sp|Q1INS6|PIMT_KORVE Protein-L-isoaspartate O-methyltransferase OS=Koribacter versatilis
(strain Ellin345) GN=pcm PE=3 SV=1
Length = 222
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDK 133
DG D P+D I V AA P +P H L GGR+VIP+G + Q L + K
Sbjct: 140 DGSEGLADQAPFDVILVAAAVPDFPPALFHQLAEGGRMVIPVGSPELQALYVVRK 194
>sp|B1KPT0|PIMT_SHEWM Protein-L-isoaspartate O-methyltransferase OS=Shewanella woodyi
(strain ATCC 51908 / MS32) GN=pcm PE=3 SV=1
Length = 211
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIY---DKFH 135
DG + + GP+DAI V AA PE + L G L+IP+GDT QQ+L + ++F
Sbjct: 134 DGWKGWPNKGPFDAIMVTAAAATVPEALLGQLVDNGVLIIPVGDTSQQLLKVVRHGEQFS 193
Query: 136 NGTIDI 141
+ ++I
Sbjct: 194 SEVVEI 199
>sp|Q0VQD1|PIMT_ALCBS Protein-L-isoaspartate O-methyltransferase OS=Alcanivorax
borkumensis (strain SK2 / ATCC 700651 / DSM 11573)
GN=pcm PE=3 SV=1
Length = 220
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 78 ADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDK---- 133
ADG + P+DAI A PE + L GGRLV+P+G +QQ+LT+ D+
Sbjct: 141 ADGGFGWTAEAPFDAILAACARVDIPEGLLSQLADGGRLVMPVGGDRQQVLTVVDRDGDQ 200
Query: 134 FHNGTIDIQHWGVVQVGLL 152
F + T+D + Q G+L
Sbjct: 201 FRSQTLDSVRFVPFQRGVL 219
>sp|Q8PLR3|PIMT_XANAC Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas
axonopodis pv. citri (strain 306) GN=pcm PE=3 SV=1
Length = 225
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFHNGT 138
DGR + ++GPYDAI V AA P + I L GGRLV P+G Q L + +G
Sbjct: 146 DGRIGWPEHGPYDAIVVTAAAPALVDALIDQLAVGGRLVAPVGGASSQSLVQLTRGADGA 205
Query: 139 IDIQ 142
I+ Q
Sbjct: 206 IEQQ 209
>sp|O59534|PIMT_PYRHO Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=pcm PE=3 SV=2
Length = 220
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 76 LIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGD--TKQQMLTIYDK 133
++ DG F PYDAI V A P P+ + LK GG+L+IP+G Q++L + K
Sbjct: 135 ILGDGSKGFPPKSPYDAIIVTAGAPEIPKPLVEQLKPGGKLIIPVGSYHLWQELLEVI-K 193
Query: 134 FHNGTIDIQ-HWGVVQVGLL 152
+G+I I+ H GV V L+
Sbjct: 194 REDGSIKIKNHGGVAFVPLI 213
>sp|A8H1T1|PIMT_SHEPA Protein-L-isoaspartate O-methyltransferase OS=Shewanella pealeana
(strain ATCC 700345 / ANG-SQ1) GN=pcm PE=3 SV=1
Length = 211
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIY---DKFH 135
DG + GPYDAI V AA PE + L GG LVIP+G+ QQ+L + ++F
Sbjct: 134 DGWQGWPSKGPYDAIMVTAAASSVPEALVAQLADGGVLVIPVGELSQQLLKLTRVGNQFT 193
Query: 136 NGTID 140
+ I+
Sbjct: 194 SEVIE 198
>sp|A2BKH8|PIMT_HYPBU Protein-L-isoaspartate O-methyltransferase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=pcm PE=3 SV=1
Length = 241
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 76 LIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFH 135
++ DG + + PYD I V AA P P I LK GG++VIPIGD Q L + K
Sbjct: 149 IVGDGSRGYPEKAPYDRIIVTAAAPDIPGPLIDQLKPGGKMVIPIGDRYLQHLYVVVKTR 208
Query: 136 NGTID 140
+G I+
Sbjct: 209 DGKIE 213
>sp|B3EEX3|PIMT_CHLL2 Protein-L-isoaspartate O-methyltransferase OS=Chlorobium limicola
(strain DSM 245 / NBRC 103803) GN=pcm PE=3 SV=1
Length = 217
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 77 IADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDK 133
+ DG + + P+D I V AA PR PE + L G LVIP+G+ Q +T+Y +
Sbjct: 136 VGDGSLGWEEEAPFDGIMVTAAAPRCPEHLLEQLGDNGCLVIPVGEHNMQQMTVYRR 192
>sp|Q7MHQ8|PIMT_VIBVY Protein-L-isoaspartate O-methyltransferase OS=Vibrio vulnificus
(strain YJ016) GN=pcm PE=3 SV=1
Length = 208
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIY---DKFH 135
DG + + GP+DAI V AA P + + L GGR+V+P+G +QQ++ I D+F
Sbjct: 131 DGWLGWENKGPFDAIIVTAAAESVPPVLLQQLNDGGRMVLPVGTDEQQLILIERQKDQFV 190
Query: 136 NGTID 140
+ I+
Sbjct: 191 SQVIE 195
>sp|Q8DC56|PIMT_VIBVU Protein-L-isoaspartate O-methyltransferase OS=Vibrio vulnificus
(strain CMCP6) GN=pcm PE=3 SV=1
Length = 208
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIY---DKFH 135
DG + + GP+DAI V AA P + + L GGR+V+P+G +QQ++ I D+F
Sbjct: 131 DGWLGWENKGPFDAIIVTAAAESVPPVLLQQLNDGGRMVLPVGTDEQQLILIERQKDQFV 190
Query: 136 NGTID 140
+ I+
Sbjct: 191 SQVIE 195
>sp|B0TK10|PIMT_SHEHH Protein-L-isoaspartate O-methyltransferase OS=Shewanella
halifaxensis (strain HAW-EB4) GN=pcm PE=3 SV=1
Length = 211
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIY---DKFH 135
DG + GPYDAI V AA P+ + L GG LVIP+G+ QQ+L + DK+
Sbjct: 134 DGWEGWPSKGPYDAIMVTAAASSIPDALVSQLADGGILVIPVGEIAQQLLKVTRSGDKYR 193
Query: 136 NGTID 140
+ ++
Sbjct: 194 SEVVE 198
>sp|A0B9U1|PIMT_METTP Protein-L-isoaspartate O-methyltransferase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=pcm PE=3 SV=1
Length = 210
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 76 LIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFH 135
++ DG + + PYD I V A+ P PE L+ GGR+VIP+G Q +L + K H
Sbjct: 126 ILGDGTLGYSEQAPYDRISVAASAPDIPEPLKEQLRPGGRMVIPVGSYSQDLLVV-TKNH 184
Query: 136 NGTIDIQHWGVVQVGLL 152
+ ++ + GV+ V L+
Sbjct: 185 DIRVE-RAMGVIFVPLI 200
>sp|A1ASL8|PIMT1_PELPD Protein-L-isoaspartate O-methyltransferase 1 OS=Pelobacter
propionicus (strain DSM 2379) GN=pcm1 PE=3 SV=1
Length = 215
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 84 FGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFHNGTID 140
+ + P+DAI V A P P++ L GRLVIP+GD ++Q L + ++GT++
Sbjct: 141 WDEEAPFDAIIVTAGAPAVPQVLTDQLAVDGRLVIPVGDEREQRLVKIVRKNDGTLE 197
>sp|A9KYG4|PIMT_SHEB9 Protein-L-isoaspartate O-methyltransferase OS=Shewanella baltica
(strain OS195) GN=pcm PE=3 SV=1
Length = 211
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIY---DKFH 135
DG + + P+DAI V AA PE + L GG LV+P+G+ QQ++ I ++F
Sbjct: 134 DGWLGWANRSPFDAIMVTAAASTIPEALLSQLAEGGVLVLPVGEDTQQLMRITRTGERFS 193
Query: 136 NGTID 140
+ TI+
Sbjct: 194 SETIE 198
>sp|B6YX51|PIMT_THEON Protein-L-isoaspartate O-methyltransferase OS=Thermococcus
onnurineus (strain NA1) GN=pcm PE=3 SV=1
Length = 220
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 71 DHDYDLIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTK-QQMLT 129
D + +I DG F PYD I V A P PE + LK GG+L+IP+G Q L
Sbjct: 130 DRVHVIIGDGTKGFPPKAPYDRILVAAGAPNVPEPLVEQLKPGGKLIIPVGSYHLWQELY 189
Query: 130 IYDKFHNGTIDIQ-HWGVVQVGLL 152
K +G++ ++ H GV V L+
Sbjct: 190 EVIKLKDGSVKVKRHGGVAFVPLI 213
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.140 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,831,158
Number of Sequences: 539616
Number of extensions: 2960112
Number of successful extensions: 5559
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 5236
Number of HSP's gapped (non-prelim): 332
length of query: 165
length of database: 191,569,459
effective HSP length: 109
effective length of query: 56
effective length of database: 132,751,315
effective search space: 7434073640
effective search space used: 7434073640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)