Query psy8015
Match_columns 165
No_of_seqs 166 out of 1199
Neff 7.9
Searched_HMMs 29240
Date Sat Aug 17 00:38:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8015.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8015hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lbf_A Protein-L-isoaspartate 99.9 6.4E-25 2.2E-29 167.0 14.3 145 9-156 61-208 (210)
2 1r18_A Protein-L-isoaspartate( 99.9 1.1E-24 3.9E-29 168.1 11.5 145 8-152 65-227 (227)
3 1jg1_A PIMT;, protein-L-isoasp 99.9 1.5E-23 5.3E-28 162.7 14.8 147 9-157 75-226 (235)
4 2pbf_A Protein-L-isoaspartate 99.9 5.5E-24 1.9E-28 163.8 11.9 146 8-154 61-226 (227)
5 2yxe_A Protein-L-isoaspartate 99.9 9.7E-23 3.3E-27 155.4 13.9 148 9-160 61-214 (215)
6 1i1n_A Protein-L-isoaspartate 99.9 6.7E-23 2.3E-27 157.6 12.6 152 9-160 59-223 (226)
7 1dl5_A Protein-L-isoaspartate 99.9 5.2E-21 1.8E-25 155.1 12.7 150 5-156 55-212 (317)
8 1vbf_A 231AA long hypothetical 99.8 1.8E-20 6.2E-25 144.2 14.6 146 9-159 54-202 (231)
9 3njr_A Precorrin-6Y methylase; 99.8 3.3E-19 1.1E-23 136.1 8.2 149 11-163 41-197 (204)
10 3e05_A Precorrin-6Y C5,15-meth 99.8 3.4E-18 1.2E-22 129.4 9.4 151 11-163 26-187 (204)
11 3mti_A RRNA methylase; SAM-dep 99.7 8.4E-17 2.9E-21 119.7 9.7 96 25-121 21-136 (185)
12 3dr5_A Putative O-methyltransf 99.7 2.3E-17 8E-22 127.6 6.6 109 10-118 37-161 (221)
13 1pjz_A Thiopurine S-methyltran 99.7 3.9E-17 1.3E-21 124.3 7.6 111 8-119 5-139 (203)
14 1xxl_A YCGJ protein; structura 99.7 1.3E-16 4.5E-21 123.6 10.6 114 7-121 3-125 (239)
15 1vl5_A Unknown conserved prote 99.7 1.6E-16 5.3E-21 124.2 10.7 108 12-120 24-140 (260)
16 3hm2_A Precorrin-6Y C5,15-meth 99.7 2.2E-16 7.6E-21 116.1 10.9 110 11-122 11-129 (178)
17 3ntv_A MW1564 protein; rossman 99.7 6.7E-17 2.3E-21 125.2 7.8 106 13-118 58-174 (232)
18 3tfw_A Putative O-methyltransf 99.7 1.3E-16 4.6E-21 124.9 9.5 110 10-119 47-169 (248)
19 3duw_A OMT, O-methyltransferas 99.7 4.2E-17 1.4E-21 124.8 6.0 110 10-119 42-166 (223)
20 3f4k_A Putative methyltransfer 99.7 3.5E-16 1.2E-20 121.6 11.3 111 10-120 30-150 (257)
21 4hg2_A Methyltransferase type 99.7 6.7E-16 2.3E-20 122.2 12.4 105 11-121 26-136 (257)
22 3fpf_A Mtnas, putative unchara 99.7 3.6E-16 1.2E-20 126.1 10.6 103 16-121 113-223 (298)
23 1nkv_A Hypothetical protein YJ 99.7 4.1E-16 1.4E-20 121.2 10.4 110 9-120 20-140 (256)
24 2gb4_A Thiopurine S-methyltran 99.7 3.7E-16 1.3E-20 123.2 10.2 107 13-119 55-190 (252)
25 1sui_A Caffeoyl-COA O-methyltr 99.7 1.1E-16 3.8E-21 125.6 6.7 110 10-119 63-189 (247)
26 3r3h_A O-methyltransferase, SA 99.7 2.7E-17 9.2E-22 128.8 2.7 110 10-119 44-169 (242)
27 3ou2_A SAM-dependent methyltra 99.7 1.2E-15 4.1E-20 115.4 11.7 107 14-123 34-149 (218)
28 2p7i_A Hypothetical protein; p 99.6 7E-16 2.4E-20 118.5 10.4 107 13-122 29-143 (250)
29 2bm8_A Cephalosporin hydroxyla 99.6 8.4E-16 2.9E-20 119.8 10.7 105 11-119 67-186 (236)
30 3cvo_A Methyltransferase-like 99.6 7.9E-16 2.7E-20 117.9 10.1 107 9-118 15-152 (202)
31 3p9n_A Possible methyltransfer 99.6 4.5E-16 1.5E-20 116.5 8.5 112 11-122 27-155 (189)
32 3tr6_A O-methyltransferase; ce 99.6 8.5E-17 2.9E-21 123.1 4.4 110 10-119 48-173 (225)
33 4gek_A TRNA (CMO5U34)-methyltr 99.6 1.5E-15 5.1E-20 120.3 11.5 94 25-120 69-178 (261)
34 3u81_A Catechol O-methyltransf 99.6 2.5E-16 8.4E-21 120.9 6.4 111 10-120 42-170 (221)
35 3kkz_A Uncharacterized protein 99.6 1.4E-15 4.8E-20 119.4 10.8 112 10-121 30-151 (267)
36 3ofk_A Nodulation protein S; N 99.6 1.3E-15 4.3E-20 115.7 9.8 105 15-120 40-154 (216)
37 3jwg_A HEN1, methyltransferase 99.6 3.5E-15 1.2E-19 113.6 11.8 108 13-121 17-142 (219)
38 4df3_A Fibrillarin-like rRNA/T 99.6 1.8E-15 6E-20 118.4 10.1 97 24-120 75-182 (233)
39 1dus_A MJ0882; hypothetical pr 99.6 3.5E-15 1.2E-19 110.4 11.1 110 12-123 39-160 (194)
40 3jwh_A HEN1; methyltransferase 99.6 4.9E-15 1.7E-19 112.8 12.1 107 14-121 18-142 (217)
41 3vc1_A Geranyl diphosphate 2-C 99.6 1.8E-15 6.3E-20 121.6 10.0 108 14-121 105-222 (312)
42 3c3y_A Pfomt, O-methyltransfer 99.6 3E-16 1E-20 122.2 5.1 110 10-119 54-180 (237)
43 3id6_C Fibrillarin-like rRNA/T 99.6 1.5E-15 5E-20 118.8 8.7 111 9-121 57-182 (232)
44 3ujc_A Phosphoethanolamine N-m 99.6 2.3E-15 7.9E-20 117.1 9.8 109 12-121 42-160 (266)
45 3dh0_A SAM dependent methyltra 99.6 1.2E-15 4E-20 116.0 7.7 106 14-120 26-143 (219)
46 3dtn_A Putative methyltransfer 99.6 4.1E-15 1.4E-19 114.2 10.7 108 12-120 30-148 (234)
47 2hnk_A SAM-dependent O-methylt 99.6 2.5E-16 8.5E-21 122.2 3.8 107 14-120 48-181 (239)
48 3evz_A Methyltransferase; NYSG 99.6 3.3E-15 1.1E-19 114.6 10.0 96 24-121 53-180 (230)
49 1nt2_A Fibrillarin-like PRE-rR 99.6 1.8E-15 6.1E-20 116.0 8.3 95 24-120 55-161 (210)
50 3c3p_A Methyltransferase; NP_9 99.6 8.3E-16 2.9E-20 116.8 6.2 109 10-119 40-159 (210)
51 3mb5_A SAM-dependent methyltra 99.6 4.4E-15 1.5E-19 115.6 10.1 110 11-122 79-196 (255)
52 2ift_A Putative methylase HI07 99.6 1.3E-15 4.3E-20 115.7 6.5 113 11-123 38-166 (201)
53 3hem_A Cyclopropane-fatty-acyl 99.6 7.6E-15 2.6E-19 117.3 11.3 103 15-121 62-184 (302)
54 1l3i_A Precorrin-6Y methyltran 99.6 6.2E-15 2.1E-19 108.9 10.0 111 10-121 18-135 (192)
55 3m33_A Uncharacterized protein 99.6 1.1E-14 3.7E-19 112.0 11.7 105 11-120 35-142 (226)
56 3mgg_A Methyltransferase; NYSG 99.6 3.1E-15 1.1E-19 117.7 8.8 97 25-121 36-143 (276)
57 3bus_A REBM, methyltransferase 99.6 9.1E-15 3.1E-19 114.7 11.4 106 14-120 50-166 (273)
58 2b25_A Hypothetical protein; s 99.6 5.7E-15 1.9E-19 120.1 10.3 112 10-122 90-221 (336)
59 3hnr_A Probable methyltransfer 99.6 8.9E-15 3E-19 111.2 10.8 103 14-120 34-145 (220)
60 2yqz_A Hypothetical protein TT 99.6 1E-14 3.4E-19 113.4 11.2 111 11-121 20-142 (263)
61 2o57_A Putative sarcosine dime 99.6 6.9E-15 2.4E-19 116.9 10.4 110 12-121 65-188 (297)
62 4htf_A S-adenosylmethionine-de 99.6 4.3E-15 1.5E-19 117.6 9.1 104 16-121 60-174 (285)
63 3gu3_A Methyltransferase; alph 99.6 7.6E-15 2.6E-19 116.6 10.5 109 12-122 8-128 (284)
64 2fpo_A Methylase YHHF; structu 99.6 1.8E-15 6.3E-20 114.9 6.6 113 10-122 38-162 (202)
65 2yvl_A TRMI protein, hypotheti 99.6 2.2E-14 7.6E-19 110.8 12.8 111 11-122 77-192 (248)
66 2xvm_A Tellurite resistance pr 99.6 7.3E-15 2.5E-19 109.6 9.6 103 16-120 23-136 (199)
67 3kr9_A SAM-dependent methyltra 99.6 3.2E-15 1.1E-19 116.3 7.8 98 24-121 13-120 (225)
68 2pwy_A TRNA (adenine-N(1)-)-me 99.6 1.1E-14 3.8E-19 113.1 10.8 112 11-123 82-201 (258)
69 2p35_A Trans-aconitate 2-methy 99.6 6E-15 2.1E-19 114.6 9.3 107 10-121 18-133 (259)
70 3a27_A TYW2, uncharacterized p 99.6 6.7E-15 2.3E-19 116.9 9.7 101 21-122 114-221 (272)
71 3dlc_A Putative S-adenosyl-L-m 99.6 4.9E-15 1.7E-19 111.8 8.4 108 11-120 30-148 (219)
72 2gpy_A O-methyltransferase; st 99.6 2.2E-15 7.6E-20 116.1 6.6 109 10-119 39-159 (233)
73 2avd_A Catechol-O-methyltransf 99.6 1.5E-15 5.3E-20 116.3 5.7 110 10-119 53-178 (229)
74 1i9g_A Hypothetical protein RV 99.6 8.5E-15 2.9E-19 115.5 10.1 111 11-122 85-205 (280)
75 3ege_A Putative methyltransfer 99.6 2.2E-14 7.7E-19 112.4 12.2 107 10-122 19-132 (261)
76 2frn_A Hypothetical protein PH 99.6 7.8E-15 2.7E-19 116.8 9.7 106 12-121 114-226 (278)
77 3dmg_A Probable ribosomal RNA 99.6 5.1E-15 1.8E-19 123.2 8.8 113 10-123 212-343 (381)
78 3l8d_A Methyltransferase; stru 99.6 2.2E-14 7.6E-19 110.3 11.7 96 25-121 52-154 (242)
79 3eey_A Putative rRNA methylase 99.6 4.2E-15 1.4E-19 111.5 7.3 97 24-120 20-139 (197)
80 3cbg_A O-methyltransferase; cy 99.6 8.4E-16 2.9E-20 119.1 3.5 109 11-119 57-181 (232)
81 3dxy_A TRNA (guanine-N(7)-)-me 99.6 6.1E-15 2.1E-19 113.7 8.1 98 26-123 34-153 (218)
82 3g89_A Ribosomal RNA small sub 99.6 3.2E-15 1.1E-19 117.5 6.6 98 25-122 79-186 (249)
83 1yb2_A Hypothetical protein TA 99.6 1.1E-14 3.7E-19 115.4 9.6 107 15-123 100-214 (275)
84 3g5l_A Putative S-adenosylmeth 99.6 9.9E-15 3.4E-19 113.4 9.2 96 25-121 43-146 (253)
85 1yzh_A TRNA (guanine-N(7)-)-me 99.6 2.2E-14 7.5E-19 109.3 11.0 98 25-122 40-158 (214)
86 4dcm_A Ribosomal RNA large sub 99.6 4.8E-15 1.7E-19 123.0 7.8 117 5-123 202-337 (375)
87 3m70_A Tellurite resistance pr 99.6 1.3E-14 4.5E-19 114.8 10.0 104 15-121 110-224 (286)
88 2ex4_A Adrenal gland protein A 99.6 6.1E-15 2.1E-19 114.1 7.9 96 26-121 79-186 (241)
89 1ws6_A Methyltransferase; stru 99.6 3.2E-15 1.1E-19 109.0 5.7 114 10-124 24-151 (171)
90 1ve3_A Hypothetical protein PH 99.6 3.5E-14 1.2E-18 108.1 11.6 97 25-122 37-144 (227)
91 3grz_A L11 mtase, ribosomal pr 99.6 9E-15 3.1E-19 110.4 8.2 112 5-119 39-158 (205)
92 2fhp_A Methylase, putative; al 99.6 2.8E-15 9.5E-20 111.0 5.3 115 9-123 27-157 (187)
93 2esr_A Methyltransferase; stru 99.6 3.4E-15 1.2E-19 110.1 5.7 113 11-123 16-141 (177)
94 1xdz_A Methyltransferase GIDB; 99.6 3.7E-15 1.3E-19 115.7 6.1 97 25-122 69-176 (240)
95 3lec_A NADB-rossmann superfami 99.6 8.6E-15 3E-19 114.2 8.0 106 16-121 11-126 (230)
96 3h2b_A SAM-dependent methyltra 99.6 1.5E-14 5E-19 108.8 9.0 95 26-123 41-144 (203)
97 1zx0_A Guanidinoacetate N-meth 99.6 6.3E-15 2.2E-19 113.9 7.2 95 25-120 59-170 (236)
98 3gdh_A Trimethylguanosine synt 99.5 1.2E-15 4E-20 118.0 2.8 105 14-119 66-180 (241)
99 3dli_A Methyltransferase; PSI- 99.5 1.2E-14 4.3E-19 112.3 8.4 107 10-122 25-142 (240)
100 2p8j_A S-adenosylmethionine-de 99.5 1.7E-14 5.8E-19 108.6 8.9 109 12-121 9-129 (209)
101 3ccf_A Cyclopropane-fatty-acyl 99.5 2.1E-14 7E-19 113.5 9.6 104 14-122 46-156 (279)
102 1u2z_A Histone-lysine N-methyl 99.5 2.2E-14 7.4E-19 121.2 10.2 109 10-119 227-358 (433)
103 3e23_A Uncharacterized protein 99.5 1.6E-14 5.6E-19 109.3 8.5 101 17-122 34-143 (211)
104 1fbn_A MJ fibrillarin homologu 99.5 1.6E-14 5.6E-19 111.4 8.6 96 24-120 72-178 (230)
105 1ixk_A Methyltransferase; open 99.5 6.4E-15 2.2E-19 119.4 6.6 107 15-121 107-247 (315)
106 2yxd_A Probable cobalt-precorr 99.5 5.2E-14 1.8E-18 103.3 10.7 108 10-122 20-133 (183)
107 1jsx_A Glucose-inhibited divis 99.5 2.6E-14 9E-19 107.7 9.3 110 12-123 49-168 (207)
108 3g2m_A PCZA361.24; SAM-depende 99.5 2.6E-14 9E-19 114.0 9.8 110 10-122 68-192 (299)
109 2fca_A TRNA (guanine-N(7)-)-me 99.5 1.8E-14 6E-19 110.4 8.4 98 25-122 37-155 (213)
110 1xtp_A LMAJ004091AAA; SGPP, st 99.5 2.7E-14 9.2E-19 110.6 9.5 106 15-121 83-198 (254)
111 3gnl_A Uncharacterized protein 99.5 1.3E-14 4.5E-19 114.1 7.7 98 24-121 19-126 (244)
112 3orh_A Guanidinoacetate N-meth 99.5 1.6E-14 5.6E-19 112.3 8.2 94 25-119 59-169 (236)
113 3mq2_A 16S rRNA methyltransfer 99.5 1.4E-14 4.7E-19 110.3 7.6 114 6-121 8-141 (218)
114 3bkw_A MLL3908 protein, S-aden 99.5 3.8E-14 1.3E-18 108.9 10.1 104 16-121 34-145 (243)
115 3g5t_A Trans-aconitate 3-methy 99.5 3E-14 1E-18 113.7 9.8 106 12-118 23-147 (299)
116 3tma_A Methyltransferase; thum 99.5 2.7E-14 9.3E-19 117.0 9.6 110 13-123 191-320 (354)
117 3lpm_A Putative methyltransfer 99.5 2E-14 7E-19 112.8 8.4 109 15-123 37-179 (259)
118 3p2e_A 16S rRNA methylase; met 99.5 1.1E-14 3.9E-19 112.7 6.5 117 1-120 1-139 (225)
119 1o54_A SAM-dependent O-methylt 99.5 4.7E-14 1.6E-18 111.6 10.2 109 12-122 99-215 (277)
120 1y8c_A S-adenosylmethionine-de 99.5 5.1E-14 1.8E-18 108.1 9.9 108 12-121 22-143 (246)
121 3i9f_A Putative type 11 methyl 99.5 1.1E-14 3.7E-19 106.7 5.7 99 16-121 8-113 (170)
122 3lcc_A Putative methyl chlorid 99.5 3.9E-14 1.3E-18 109.0 9.1 106 13-121 55-172 (235)
123 3ggd_A SAM-dependent methyltra 99.5 3.6E-14 1.2E-18 109.7 8.9 97 24-121 54-164 (245)
124 2kw5_A SLR1183 protein; struct 99.5 9.1E-14 3.1E-18 104.4 10.8 105 13-122 20-133 (202)
125 1kpg_A CFA synthase;, cyclopro 99.5 7.7E-14 2.6E-18 110.3 10.8 94 25-121 63-169 (287)
126 3iv6_A Putative Zn-dependent a 99.5 5.8E-14 2E-18 111.4 9.8 108 12-122 32-150 (261)
127 3sm3_A SAM-dependent methyltra 99.5 6.3E-14 2.2E-18 106.8 9.6 96 25-120 29-141 (235)
128 3thr_A Glycine N-methyltransfe 99.5 1.5E-14 5E-19 114.7 6.2 107 14-121 46-176 (293)
129 3pfg_A N-methyltransferase; N, 99.5 7.3E-14 2.5E-18 109.2 10.1 103 14-120 37-151 (263)
130 4dzr_A Protein-(glutamine-N5) 99.5 3.1E-15 1E-19 112.6 1.9 86 13-99 17-111 (215)
131 2jjq_A Uncharacterized RNA met 99.5 1.3E-14 4.5E-19 122.3 5.5 135 12-155 276-417 (425)
132 2gs9_A Hypothetical protein TT 99.5 1E-13 3.5E-18 104.8 9.9 101 16-123 28-135 (211)
133 2pxx_A Uncharacterized protein 99.5 7.2E-14 2.4E-18 105.2 8.9 99 25-123 41-162 (215)
134 3ajd_A Putative methyltransfer 99.5 7.7E-15 2.6E-19 116.5 3.6 99 23-121 80-212 (274)
135 2fk8_A Methoxy mycolic acid sy 99.5 1.4E-13 4.6E-18 110.6 10.8 95 25-122 89-196 (318)
136 3g07_A 7SK snRNA methylphospha 99.5 3.8E-14 1.3E-18 113.3 7.6 94 26-119 46-219 (292)
137 3ckk_A TRNA (guanine-N(7)-)-me 99.5 7.8E-14 2.7E-18 108.7 8.6 98 25-122 45-170 (235)
138 3q87_B N6 adenine specific DNA 99.5 1.3E-13 4.4E-18 101.9 9.3 98 14-121 10-124 (170)
139 3htx_A HEN1; HEN1, small RNA m 99.5 1.8E-13 6.1E-18 122.8 11.7 108 12-121 708-835 (950)
140 1uwv_A 23S rRNA (uracil-5-)-me 99.5 3.3E-14 1.1E-18 119.8 6.6 137 14-154 275-421 (433)
141 1wzn_A SAM-dependent methyltra 99.5 1.9E-13 6.5E-18 105.9 10.3 95 25-121 40-146 (252)
142 3bkx_A SAM-dependent methyltra 99.5 1.4E-13 4.8E-18 108.0 9.5 109 12-121 30-160 (275)
143 1nv8_A HEMK protein; class I a 99.5 1.7E-13 5.9E-18 109.6 10.1 109 12-123 110-252 (284)
144 3d2l_A SAM-dependent methyltra 99.5 2.1E-13 7.3E-18 104.7 10.2 94 25-121 32-138 (243)
145 3ocj_A Putative exported prote 99.5 9.4E-14 3.2E-18 111.3 8.5 97 24-121 116-228 (305)
146 2nxc_A L11 mtase, ribosomal pr 99.5 4.5E-14 1.5E-18 111.0 6.4 113 4-120 98-218 (254)
147 3bt7_A TRNA (uracil-5-)-methyl 99.5 7.4E-14 2.5E-18 115.4 8.0 136 14-155 203-359 (369)
148 2ozv_A Hypothetical protein AT 99.5 2.2E-13 7.4E-18 107.4 10.2 107 17-123 27-173 (260)
149 2frx_A Hypothetical protein YE 99.5 4.8E-14 1.6E-18 120.5 6.9 99 23-121 112-247 (479)
150 2b3t_A Protein methyltransfera 99.5 1.1E-13 3.9E-18 109.4 8.4 108 13-123 98-241 (276)
151 3cgg_A SAM-dependent methyltra 99.5 5.3E-13 1.8E-17 98.7 11.5 104 15-123 37-150 (195)
152 1g8a_A Fibrillarin-like PRE-rR 99.5 1.1E-13 3.8E-18 106.1 8.0 110 10-121 55-179 (227)
153 3e8s_A Putative SAM dependent 99.5 2E-13 6.7E-18 103.4 9.1 102 15-121 42-153 (227)
154 3adn_A Spermidine synthase; am 99.5 3.1E-13 1.1E-17 108.8 10.5 97 25-121 82-199 (294)
155 1ri5_A MRNA capping enzyme; me 99.5 4.1E-13 1.4E-17 106.0 10.9 98 25-122 63-176 (298)
156 2igt_A SAM dependent methyltra 99.5 6.3E-14 2.1E-18 114.6 6.0 111 12-122 139-274 (332)
157 1p91_A Ribosomal RNA large sub 99.4 6.8E-13 2.3E-17 103.9 11.6 94 25-122 84-180 (269)
158 2vdv_E TRNA (guanine-N(7)-)-me 99.4 2E-13 6.7E-18 106.4 8.2 98 25-122 48-175 (246)
159 2yxl_A PH0851 protein, 450AA l 99.4 2E-13 7E-18 115.5 8.9 109 13-121 246-390 (450)
160 2ipx_A RRNA 2'-O-methyltransfe 99.4 1.6E-13 5.4E-18 105.8 7.2 111 10-122 59-184 (233)
161 3k6r_A Putative transferase PH 99.4 2.7E-13 9.3E-18 108.5 8.6 107 9-119 111-224 (278)
162 4fsd_A Arsenic methyltransfera 99.4 2.4E-13 8.1E-18 112.7 8.5 96 25-120 82-203 (383)
163 3uwp_A Histone-lysine N-methyl 99.4 2.3E-13 7.7E-18 114.3 8.2 108 10-119 158-287 (438)
164 1o9g_A RRNA methyltransferase; 99.4 6.7E-14 2.3E-18 109.1 4.5 94 26-119 51-213 (250)
165 2qe6_A Uncharacterized protein 99.4 1E-12 3.4E-17 104.5 10.9 110 13-122 64-198 (274)
166 2pjd_A Ribosomal RNA small sub 99.4 2.1E-13 7.2E-18 111.4 7.1 114 5-122 176-305 (343)
167 2avn_A Ubiquinone/menaquinone 99.4 6.5E-13 2.2E-17 103.9 9.5 101 15-121 45-153 (260)
168 2plw_A Ribosomal RNA methyltra 99.4 5.8E-13 2E-17 99.8 8.8 101 13-122 6-156 (201)
169 3bxo_A N,N-dimethyltransferase 99.4 5.6E-13 1.9E-17 102.1 8.8 92 25-120 39-141 (239)
170 2fyt_A Protein arginine N-meth 99.4 9.5E-13 3.2E-17 107.7 10.5 93 24-117 62-168 (340)
171 2b78_A Hypothetical protein SM 99.4 3.1E-13 1.1E-17 112.4 7.3 110 13-124 201-335 (385)
172 3m4x_A NOL1/NOP2/SUN family pr 99.4 6.4E-14 2.2E-18 119.0 3.2 104 18-121 97-235 (456)
173 2cmg_A Spermidine synthase; tr 99.4 9.3E-13 3.2E-17 104.4 9.4 95 25-122 71-173 (262)
174 3gru_A Dimethyladenosine trans 99.4 4.7E-13 1.6E-17 107.9 7.6 88 11-99 36-124 (295)
175 3m6w_A RRNA methylase; rRNA me 99.4 5.5E-14 1.9E-18 119.7 2.2 98 23-121 98-230 (464)
176 1wxx_A TT1595, hypothetical pr 99.4 1.6E-13 5.4E-18 113.8 4.5 103 20-123 204-328 (382)
177 2p41_A Type II methyltransfera 99.4 1E-12 3.4E-17 106.3 9.1 111 9-122 63-193 (305)
178 3opn_A Putative hemolysin; str 99.4 9.2E-14 3.1E-18 108.3 2.7 102 14-120 25-137 (232)
179 2i62_A Nicotinamide N-methyltr 99.4 5.6E-13 1.9E-17 103.6 7.2 97 25-121 55-199 (265)
180 3dou_A Ribosomal RNA large sub 99.4 1.2E-12 4E-17 99.0 8.5 104 10-122 6-141 (191)
181 1vlm_A SAM-dependent methyltra 99.4 1.5E-12 5E-17 99.3 8.9 89 25-122 46-141 (219)
182 3c0k_A UPF0064 protein YCCW; P 99.4 2.6E-13 8.8E-18 113.0 4.9 108 14-124 211-343 (396)
183 2yx1_A Hypothetical protein MJ 99.4 1.1E-12 3.7E-17 107.2 8.5 93 25-121 194-292 (336)
184 3q7e_A Protein arginine N-meth 99.4 1E-12 3.4E-17 107.8 8.3 92 25-117 65-170 (349)
185 1iy9_A Spermidine synthase; ro 99.4 8.6E-13 3E-17 105.0 7.5 98 25-122 74-191 (275)
186 3r0q_C Probable protein argini 99.4 2.1E-12 7.1E-17 107.0 9.8 92 25-118 62-167 (376)
187 1ej0_A FTSJ; methyltransferase 99.4 1.6E-12 5.5E-17 94.2 7.8 99 15-122 11-138 (180)
188 2h00_A Methyltransferase 10 do 99.4 1.3E-12 4.4E-17 101.8 7.7 74 26-99 65-150 (254)
189 1mjf_A Spermidine synthase; sp 99.4 1.1E-12 3.9E-17 104.5 7.4 97 24-121 73-194 (281)
190 3bgv_A MRNA CAP guanine-N7 met 99.4 2.9E-12 1E-16 102.8 9.7 109 14-122 21-157 (313)
191 2a14_A Indolethylamine N-methy 99.4 4.7E-13 1.6E-17 105.3 4.9 97 25-121 54-198 (263)
192 4dmg_A Putative uncharacterize 99.4 7.7E-13 2.6E-17 110.5 6.4 106 13-121 203-327 (393)
193 3cc8_A Putative methyltransfer 99.4 2.6E-12 8.8E-17 97.4 8.7 93 25-122 31-132 (230)
194 2o07_A Spermidine synthase; st 99.3 2.4E-12 8E-17 104.0 8.9 97 25-121 94-210 (304)
195 1sqg_A SUN protein, FMU protei 99.3 1.4E-12 4.9E-17 109.6 7.9 103 16-120 237-374 (429)
196 1xj5_A Spermidine synthase 1; 99.3 5.6E-13 1.9E-17 109.1 5.2 97 25-121 119-236 (334)
197 2y1w_A Histone-arginine methyl 99.3 3.5E-12 1.2E-16 104.5 9.9 101 16-119 41-154 (348)
198 3gjy_A Spermidine synthase; AP 99.3 1.5E-12 5.2E-17 105.9 7.6 95 28-122 91-202 (317)
199 1zq9_A Probable dimethyladenos 99.3 1.9E-12 6.6E-17 103.4 8.1 86 11-99 14-103 (285)
200 3bwc_A Spermidine synthase; SA 99.3 4E-12 1.4E-16 102.5 9.9 98 25-122 94-212 (304)
201 2vdw_A Vaccinia virus capping 99.3 1.8E-12 6.2E-17 104.5 7.9 97 26-122 48-171 (302)
202 2as0_A Hypothetical protein PH 99.3 4.7E-13 1.6E-17 111.3 4.6 99 25-123 216-338 (396)
203 3bzb_A Uncharacterized protein 99.3 9.2E-12 3.1E-16 99.0 11.8 98 25-122 78-207 (281)
204 3hp7_A Hemolysin, putative; st 99.3 1.8E-12 6.2E-17 104.3 7.6 108 10-121 66-186 (291)
205 3tm4_A TRNA (guanine N2-)-meth 99.3 3.5E-12 1.2E-16 105.5 9.4 108 11-122 204-331 (373)
206 3fzg_A 16S rRNA methylase; met 99.3 6.3E-13 2.2E-17 101.0 4.4 92 25-119 48-151 (200)
207 1uir_A Polyamine aminopropyltr 99.3 1.4E-12 4.7E-17 105.7 6.5 98 24-121 75-196 (314)
208 1inl_A Spermidine synthase; be 99.3 1.3E-12 4.5E-17 105.0 6.4 98 25-122 89-207 (296)
209 2f8l_A Hypothetical protein LM 99.3 1.3E-12 4.4E-17 106.7 6.4 109 10-120 114-256 (344)
210 2qm3_A Predicted methyltransfe 99.3 1E-11 3.5E-16 102.6 11.8 112 11-122 156-280 (373)
211 1g6q_1 HnRNP arginine N-methyl 99.3 6.8E-12 2.3E-16 102.0 10.3 92 25-117 37-142 (328)
212 2b2c_A Spermidine synthase; be 99.3 1.6E-12 5.3E-17 105.6 6.4 98 25-122 107-224 (314)
213 4e2x_A TCAB9; kijanose, tetron 99.3 1.7E-13 5.8E-18 114.2 0.6 104 15-121 97-209 (416)
214 2wa2_A Non-structural protein 99.3 5.4E-12 1.9E-16 100.7 9.1 108 9-121 63-194 (276)
215 2aot_A HMT, histamine N-methyl 99.3 9.9E-13 3.4E-17 104.7 4.7 97 25-121 51-173 (292)
216 2g72_A Phenylethanolamine N-me 99.3 3.4E-12 1.2E-16 101.2 7.7 107 14-120 58-215 (289)
217 2h1r_A Dimethyladenosine trans 99.3 4.3E-12 1.5E-16 102.1 8.3 88 10-100 27-117 (299)
218 2oxt_A Nucleoside-2'-O-methylt 99.3 5.4E-12 1.8E-16 100.1 8.7 106 10-121 56-186 (265)
219 2b9e_A NOL1/NOP2/SUN domain fa 99.3 3.2E-12 1.1E-16 103.6 7.5 77 23-99 99-184 (309)
220 3dp7_A SAM-dependent methyltra 99.3 2.3E-11 8E-16 99.9 12.8 95 25-120 178-287 (363)
221 1qzz_A RDMB, aclacinomycin-10- 99.3 6.8E-12 2.3E-16 102.8 9.3 102 16-121 173-288 (374)
222 3gwz_A MMCR; methyltransferase 99.3 1.6E-11 5.6E-16 101.0 11.6 101 16-120 193-307 (369)
223 2i7c_A Spermidine synthase; tr 99.3 3.9E-12 1.3E-16 101.5 7.6 97 25-121 77-193 (283)
224 1x19_A CRTF-related protein; m 99.3 1.6E-11 5.6E-16 100.3 11.3 103 14-120 179-295 (359)
225 2pt6_A Spermidine synthase; tr 99.3 9.2E-12 3.1E-16 101.2 8.9 98 25-122 115-232 (321)
226 2nyu_A Putative ribosomal RNA 99.3 9.1E-12 3.1E-16 92.8 8.2 101 13-122 6-147 (196)
227 3i53_A O-methyltransferase; CO 99.3 1.1E-11 3.7E-16 100.3 9.1 94 25-121 168-275 (332)
228 1af7_A Chemotaxis receptor met 99.3 1.4E-11 4.7E-16 98.3 9.0 97 26-122 105-254 (274)
229 2zfu_A Nucleomethylin, cerebra 99.3 1.6E-11 5.6E-16 92.9 8.9 91 15-121 56-152 (215)
230 1tw3_A COMT, carminomycin 4-O- 99.3 1.6E-11 5.6E-16 100.1 9.5 102 16-121 174-289 (360)
231 4hc4_A Protein arginine N-meth 99.3 1.1E-11 3.7E-16 103.0 8.5 91 25-117 82-186 (376)
232 2r3s_A Uncharacterized protein 99.3 2.1E-11 7.3E-16 98.2 10.0 105 14-121 152-272 (335)
233 3v97_A Ribosomal RNA large sub 99.3 1.2E-11 4E-16 110.1 9.2 108 13-123 529-660 (703)
234 4azs_A Methyltransferase WBDD; 99.3 5.2E-12 1.8E-16 109.7 6.3 95 25-119 65-172 (569)
235 1wy7_A Hypothetical protein PH 99.2 2.2E-10 7.6E-15 86.1 13.5 101 13-120 34-148 (207)
236 3lst_A CALO1 methyltransferase 99.2 5E-11 1.7E-15 97.2 10.6 100 16-120 175-286 (348)
237 2ip2_A Probable phenazine-spec 99.2 2.4E-11 8.2E-16 98.2 8.5 101 15-120 158-272 (334)
238 3tqs_A Ribosomal RNA small sub 99.2 1.4E-11 4.8E-16 97.3 6.9 84 11-96 15-103 (255)
239 3b3j_A Histone-arginine methyl 99.2 2E-11 7E-16 104.2 8.4 99 17-118 150-261 (480)
240 3mcz_A O-methyltransferase; ad 99.2 2.3E-11 7.7E-16 99.0 8.0 103 16-120 169-287 (352)
241 1ne2_A Hypothetical protein TA 99.2 7E-11 2.4E-15 88.6 10.0 105 12-122 35-148 (200)
242 2dul_A N(2),N(2)-dimethylguano 99.2 5.7E-12 1.9E-16 104.7 4.0 96 26-121 47-165 (378)
243 3axs_A Probable N(2),N(2)-dime 99.2 5.7E-12 1.9E-16 105.2 3.9 97 25-121 51-159 (392)
244 3fut_A Dimethyladenosine trans 99.2 6.9E-11 2.4E-15 94.1 9.5 98 11-111 33-132 (271)
245 1fp1_D Isoliquiritigenin 2'-O- 99.2 1.4E-10 4.7E-15 95.4 10.5 97 16-120 199-306 (372)
246 2okc_A Type I restriction enzy 99.2 1E-10 3.6E-15 98.7 9.8 106 14-121 160-308 (445)
247 1yub_A Ermam, rRNA methyltrans 99.2 1.8E-12 6.1E-17 101.1 -1.5 110 11-122 15-147 (245)
248 3reo_A (ISO)eugenol O-methyltr 99.2 2.3E-10 7.8E-15 94.2 10.9 89 25-121 202-301 (368)
249 3sso_A Methyltransferase; macr 99.1 3.3E-11 1.1E-15 100.8 5.9 97 13-119 205-323 (419)
250 3k0b_A Predicted N6-adenine-sp 99.1 8E-11 2.7E-15 98.2 7.7 111 12-124 188-354 (393)
251 3p9c_A Caffeic acid O-methyltr 99.1 3.9E-10 1.3E-14 92.8 11.7 97 16-120 191-298 (364)
252 3giw_A Protein of unknown func 99.1 5.4E-10 1.9E-14 89.2 11.8 109 14-122 66-202 (277)
253 2ih2_A Modification methylase 99.1 3.9E-10 1.3E-14 93.6 10.6 102 12-122 26-166 (421)
254 3ftd_A Dimethyladenosine trans 99.1 6.7E-10 2.3E-14 87.2 11.1 70 11-83 17-88 (249)
255 2qfm_A Spermine synthase; sper 99.1 1.7E-10 5.9E-15 95.2 8.0 99 26-124 188-318 (364)
256 3ll7_A Putative methyltransfer 99.1 3.4E-11 1.2E-15 101.0 3.7 85 12-98 81-172 (410)
257 1qam_A ERMC' methyltransferase 99.1 6E-10 2.1E-14 86.9 9.9 84 11-96 16-101 (244)
258 1fp2_A Isoflavone O-methyltran 99.1 5.3E-10 1.8E-14 91.2 10.0 88 25-120 187-288 (352)
259 3ldg_A Putative uncharacterize 99.1 1.1E-09 3.7E-14 91.2 11.8 111 12-124 181-347 (384)
260 3ldu_A Putative methylase; str 99.1 5.2E-10 1.8E-14 93.0 9.5 110 13-124 183-348 (385)
261 2xyq_A Putative 2'-O-methyl tr 99.1 3.7E-10 1.3E-14 90.7 7.9 93 15-121 48-172 (290)
262 2r6z_A UPF0341 protein in RSP 99.1 2.6E-11 8.9E-16 95.8 1.0 84 17-100 74-172 (258)
263 2ld4_A Anamorsin; methyltransf 99.0 7.8E-11 2.7E-15 86.7 2.4 81 24-120 10-101 (176)
264 1m6y_A S-adenosyl-methyltransf 99.0 4.3E-10 1.5E-14 90.8 6.5 90 9-100 10-109 (301)
265 4a6d_A Hydroxyindole O-methylt 99.0 2.9E-09 1E-13 87.2 11.6 93 25-120 178-283 (353)
266 1qyr_A KSGA, high level kasuga 99.0 5.8E-10 2E-14 87.8 6.6 69 11-82 7-78 (252)
267 2ar0_A M.ecoki, type I restric 99.0 7.5E-10 2.6E-14 95.8 7.4 107 14-121 158-313 (541)
268 3uzu_A Ribosomal RNA small sub 98.9 7.9E-10 2.7E-14 88.3 5.9 69 11-82 28-101 (279)
269 1zg3_A Isoflavanone 4'-O-methy 98.9 3.8E-09 1.3E-13 86.3 9.8 88 25-120 192-293 (358)
270 2wk1_A NOVP; transferase, O-me 98.9 1.9E-09 6.4E-14 86.3 6.8 103 16-118 96-242 (282)
271 2qy6_A UPF0209 protein YFCK; s 98.9 4.2E-10 1.4E-14 88.9 2.8 96 25-120 59-213 (257)
272 3lcv_B Sisomicin-gentamicin re 98.9 3E-09 1E-13 84.4 7.5 92 25-118 131-234 (281)
273 3v97_A Ribosomal RNA large sub 98.9 7.8E-09 2.7E-13 91.9 10.9 111 12-123 177-350 (703)
274 3frh_A 16S rRNA methylase; met 98.9 1E-08 3.5E-13 80.4 10.0 93 25-121 104-206 (253)
275 2oyr_A UPF0341 protein YHIQ; a 98.9 1.2E-09 4.1E-14 86.4 3.7 84 17-101 78-176 (258)
276 3o4f_A Spermidine synthase; am 98.8 2.8E-08 9.4E-13 79.9 11.3 98 24-121 81-199 (294)
277 4fzv_A Putative methyltransfer 98.8 2.5E-09 8.4E-14 88.3 5.0 104 18-121 140-285 (359)
278 3lkd_A Type I restriction-modi 98.8 1.3E-08 4.3E-13 88.2 8.9 98 25-122 220-360 (542)
279 3khk_A Type I restriction-modi 98.7 2.9E-08 9.8E-13 86.0 6.6 106 14-121 234-396 (544)
280 3s1s_A Restriction endonucleas 98.6 1.4E-07 4.9E-12 84.6 10.3 97 26-122 321-467 (878)
281 3evf_A RNA-directed RNA polyme 98.6 2.3E-07 7.8E-12 73.7 8.7 112 10-122 56-186 (277)
282 1wg8_A Predicted S-adenosylmet 98.4 5.4E-07 1.8E-11 71.9 6.2 88 10-100 7-100 (285)
283 3gcz_A Polyprotein; flavivirus 98.3 1.8E-06 6E-11 68.8 7.9 111 10-122 72-203 (282)
284 4auk_A Ribosomal RNA large sub 98.3 2.6E-06 8.8E-11 70.4 9.0 86 10-100 185-281 (375)
285 3ufb_A Type I restriction-modi 98.2 3E-06 1E-10 73.1 8.5 106 15-121 207-363 (530)
286 3c6k_A Spermine synthase; sper 98.2 3.3E-06 1.1E-10 70.0 7.8 97 25-121 204-332 (381)
287 2oo3_A Protein involved in cat 98.2 8.4E-07 2.9E-11 70.8 4.1 106 11-119 77-197 (283)
288 3p8z_A Mtase, non-structural p 98.2 1.3E-05 4.5E-10 62.5 10.6 107 10-119 60-185 (267)
289 2k4m_A TR8_protein, UPF0146 pr 98.2 1.7E-06 5.8E-11 62.7 5.1 85 25-122 34-124 (153)
290 4gqb_A Protein arginine N-meth 98.2 1.6E-06 5.6E-11 76.2 5.5 88 27-116 358-463 (637)
291 3ua3_A Protein arginine N-meth 98.1 1.4E-06 4.9E-11 77.2 3.9 91 27-117 410-531 (745)
292 2zig_A TTHA0409, putative modi 98.1 6.7E-06 2.3E-10 65.6 6.8 52 11-64 222-274 (297)
293 3eld_A Methyltransferase; flav 98.0 2.4E-05 8.2E-10 62.7 9.3 111 10-122 63-193 (300)
294 3lkz_A Non-structural protein 98.0 3.3E-05 1.1E-09 61.9 9.9 109 10-120 76-204 (321)
295 3tka_A Ribosomal RNA small sub 97.9 3.5E-05 1.2E-09 62.9 8.1 86 12-100 44-139 (347)
296 1i4w_A Mitochondrial replicati 97.9 2.8E-05 9.7E-10 63.9 7.3 69 12-82 39-116 (353)
297 2px2_A Genome polyprotein [con 97.8 6E-05 2E-09 59.3 8.1 110 8-120 53-183 (269)
298 1g60_A Adenine-specific methyl 97.7 7.5E-05 2.6E-09 58.4 6.1 52 11-64 199-251 (260)
299 3two_A Mannitol dehydrogenase; 97.3 0.0011 3.6E-08 53.5 9.2 89 23-119 173-264 (348)
300 2efj_A 3,7-dimethylxanthine me 97.3 0.0019 6.7E-08 53.5 10.5 74 27-101 53-161 (384)
301 3b5i_A S-adenosyl-L-methionine 97.2 0.00057 1.9E-08 56.5 6.4 95 27-121 53-226 (374)
302 1pl8_A Human sorbitol dehydrog 97.1 0.00048 1.6E-08 55.8 4.8 92 23-119 168-272 (356)
303 3fpc_A NADP-dependent alcohol 97.1 0.00049 1.7E-08 55.6 4.8 93 23-119 163-265 (352)
304 1e3j_A NADP(H)-dependent ketos 97.1 0.0011 3.7E-08 53.5 6.9 93 23-119 165-270 (352)
305 2dph_A Formaldehyde dismutase; 97.1 0.00048 1.6E-08 56.7 4.5 92 23-119 182-298 (398)
306 1uuf_A YAHK, zinc-type alcohol 97.0 0.00057 2E-08 55.8 4.3 91 23-119 191-287 (369)
307 1boo_A Protein (N-4 cytosine-s 96.9 0.0022 7.5E-08 51.6 6.8 67 11-80 239-308 (323)
308 3s2e_A Zinc-containing alcohol 96.8 0.00043 1.5E-08 55.6 2.2 93 23-119 163-262 (340)
309 1vj0_A Alcohol dehydrogenase, 96.8 0.00076 2.6E-08 55.2 3.7 92 24-119 193-297 (380)
310 1f8f_A Benzyl alcohol dehydrog 96.8 0.00019 6.6E-09 58.4 0.1 92 23-119 187-288 (371)
311 1m6e_X S-adenosyl-L-methionnin 96.7 0.0018 6.1E-08 53.2 5.1 95 27-121 52-210 (359)
312 4ej6_A Putative zinc-binding d 96.7 0.00067 2.3E-08 55.4 2.6 94 23-119 179-283 (370)
313 1eg2_A Modification methylase 96.5 0.0036 1.2E-07 50.5 5.8 52 11-64 229-284 (319)
314 1kol_A Formaldehyde dehydrogen 96.5 0.0026 9.1E-08 52.1 4.8 92 23-119 182-299 (398)
315 1piw_A Hypothetical zinc-type 96.4 0.0008 2.7E-08 54.6 1.3 91 23-119 176-275 (360)
316 3g7u_A Cytosine-specific methy 96.4 0.0063 2.2E-07 50.1 6.5 70 28-100 3-82 (376)
317 3m6i_A L-arabinitol 4-dehydrog 96.4 0.0092 3.2E-07 48.2 7.4 95 23-119 176-282 (363)
318 1cdo_A Alcohol dehydrogenase; 96.4 0.0018 6.1E-08 52.7 3.0 93 23-119 189-293 (374)
319 3tos_A CALS11; methyltransfera 96.4 0.0023 8E-08 50.2 3.5 94 26-119 69-216 (257)
320 3jv7_A ADH-A; dehydrogenase, n 96.3 0.0019 6.5E-08 51.9 3.0 93 23-119 168-269 (345)
321 3r24_A NSP16, 2'-O-methyl tran 96.3 0.007 2.4E-07 48.7 5.9 84 25-121 108-218 (344)
322 2h6e_A ADH-4, D-arabinose 1-de 96.3 0.0004 1.4E-08 56.0 -1.3 94 23-119 168-268 (344)
323 3uog_A Alcohol dehydrogenase; 96.3 0.0039 1.3E-07 50.5 4.6 93 23-120 186-287 (363)
324 1pqw_A Polyketide synthase; ro 96.3 0.0018 6.1E-08 47.8 2.2 93 23-119 35-136 (198)
325 3goh_A Alcohol dehydrogenase, 96.2 0.0017 5.7E-08 51.6 2.0 87 24-120 140-229 (315)
326 4a2c_A Galactitol-1-phosphate 96.2 0.0044 1.5E-07 49.6 4.3 94 23-120 157-260 (346)
327 2cf5_A Atccad5, CAD, cinnamyl 96.1 0.0046 1.6E-07 50.0 4.2 94 24-119 177-274 (357)
328 1p0f_A NADP-dependent alcohol 96.1 0.0022 7.4E-08 52.2 2.2 92 23-119 188-292 (373)
329 3uko_A Alcohol dehydrogenase c 96.1 0.0023 8E-08 52.1 2.3 92 23-119 190-294 (378)
330 2jhf_A Alcohol dehydrogenase E 96.1 0.0029 9.8E-08 51.5 2.8 92 23-119 188-292 (374)
331 1rjw_A ADH-HT, alcohol dehydro 96.0 0.0015 5.2E-08 52.5 1.0 91 23-119 161-260 (339)
332 1iz0_A Quinone oxidoreductase; 96.0 0.0038 1.3E-07 49.2 3.1 87 24-119 123-217 (302)
333 2eih_A Alcohol dehydrogenase; 96.0 0.0053 1.8E-07 49.3 3.9 92 23-119 163-264 (343)
334 1g55_A DNA cytosine methyltran 95.9 0.0045 1.5E-07 50.2 3.3 69 28-99 3-78 (343)
335 4eez_A Alcohol dehydrogenase 1 95.8 0.014 4.9E-07 46.6 5.6 96 23-120 160-263 (348)
336 3pvc_A TRNA 5-methylaminomethy 95.7 0.0057 2E-07 53.8 3.4 94 26-119 58-210 (689)
337 1jvb_A NAD(H)-dependent alcoho 95.7 0.0032 1.1E-07 50.6 1.5 94 23-119 167-270 (347)
338 2fzw_A Alcohol dehydrogenase c 95.7 0.0036 1.2E-07 50.8 1.7 93 23-119 187-291 (373)
339 1e3i_A Alcohol dehydrogenase, 95.6 0.0054 1.8E-07 49.9 2.5 93 23-119 192-296 (376)
340 1yqd_A Sinapyl alcohol dehydro 95.6 0.013 4.4E-07 47.5 4.7 93 24-119 184-281 (366)
341 3gms_A Putative NADPH:quinone 95.6 0.0022 7.4E-08 51.5 0.1 92 23-119 141-242 (340)
342 2b5w_A Glucose dehydrogenase; 95.5 0.0038 1.3E-07 50.4 1.5 89 24-119 164-272 (357)
343 3qwb_A Probable quinone oxidor 95.5 0.0063 2.2E-07 48.6 2.5 92 23-119 145-246 (334)
344 2hcy_A Alcohol dehydrogenase 1 95.4 0.024 8.3E-07 45.4 5.8 91 23-119 166-268 (347)
345 1v3u_A Leukotriene B4 12- hydr 95.3 0.021 7.1E-07 45.5 5.1 92 23-119 142-243 (333)
346 4eye_A Probable oxidoreductase 95.3 0.012 4.2E-07 47.2 3.7 91 24-119 157-256 (342)
347 4dvj_A Putative zinc-dependent 95.3 0.0041 1.4E-07 50.5 0.8 91 26-119 171-269 (363)
348 2c7p_A Modification methylase 95.3 0.032 1.1E-06 45.0 6.0 68 27-99 11-81 (327)
349 3jyn_A Quinone oxidoreductase; 95.3 0.0069 2.4E-07 48.2 2.1 93 23-120 137-239 (325)
350 3vyw_A MNMC2; tRNA wobble urid 95.2 0.015 5.2E-07 46.7 3.9 96 26-121 96-227 (308)
351 2d8a_A PH0655, probable L-thre 95.2 0.019 6.6E-07 46.0 4.4 90 26-119 167-266 (348)
352 2py6_A Methyltransferase FKBM; 95.1 0.025 8.6E-07 46.9 5.2 56 25-80 225-291 (409)
353 4b7c_A Probable oxidoreductase 95.1 0.0059 2E-07 48.8 1.3 93 23-119 146-247 (336)
354 1xa0_A Putative NADPH dependen 95.0 0.032 1.1E-06 44.2 5.2 92 24-119 146-245 (328)
355 3nx4_A Putative oxidoreductase 94.9 0.019 6.4E-07 45.5 3.7 86 29-119 149-240 (324)
356 2j3h_A NADP-dependent oxidored 94.8 0.039 1.3E-06 44.0 5.3 93 23-119 152-254 (345)
357 2dq4_A L-threonine 3-dehydroge 94.7 0.033 1.1E-06 44.6 4.7 91 23-119 162-261 (343)
358 3fwz_A Inner membrane protein 94.7 0.066 2.2E-06 37.2 5.7 89 28-122 8-107 (140)
359 2cdc_A Glucose dehydrogenase g 94.6 0.029 9.9E-07 45.4 4.2 85 27-119 181-277 (366)
360 3ip1_A Alcohol dehydrogenase, 94.5 0.014 4.8E-07 48.0 2.1 92 24-119 211-317 (404)
361 3fbg_A Putative arginate lyase 94.5 0.0054 1.9E-07 49.3 -0.5 90 26-120 150-248 (346)
362 2vn8_A Reticulon-4-interacting 94.4 0.016 5.6E-07 47.0 2.2 91 24-119 181-279 (375)
363 1wly_A CAAR, 2-haloacrylate re 94.4 0.016 5.6E-07 46.1 2.2 92 23-119 142-243 (333)
364 2vz8_A Fatty acid synthase; tr 94.4 0.034 1.1E-06 55.8 4.6 92 25-120 1239-1348(2512)
365 2j8z_A Quinone oxidoreductase; 94.2 0.097 3.3E-06 42.1 6.3 91 24-119 160-260 (354)
366 1qor_A Quinone oxidoreductase; 94.1 0.01 3.4E-07 47.2 0.4 93 23-119 137-238 (327)
367 2c0c_A Zinc binding alcohol de 93.9 0.021 7.3E-07 46.2 1.8 92 23-119 160-260 (362)
368 4dup_A Quinone oxidoreductase; 93.8 0.014 4.7E-07 47.1 0.5 93 23-120 164-265 (353)
369 3tqh_A Quinone oxidoreductase; 93.7 0.086 2.9E-06 41.7 5.1 91 23-119 149-244 (321)
370 3krt_A Crotonyl COA reductase; 93.7 0.015 5.2E-07 48.6 0.6 92 23-119 225-343 (456)
371 2zig_A TTHA0409, putative modi 93.5 0.04 1.4E-06 43.5 2.8 53 70-122 19-99 (297)
372 3gqv_A Enoyl reductase; medium 93.5 0.025 8.5E-07 45.9 1.6 89 25-119 163-262 (371)
373 3ubt_Y Modification methylase 93.3 0.11 3.7E-06 41.2 5.0 67 28-98 1-70 (331)
374 2qrv_A DNA (cytosine-5)-methyl 93.3 0.11 3.9E-06 41.2 5.1 70 25-97 14-91 (295)
375 4h0n_A DNMT2; SAH binding, tra 93.3 0.052 1.8E-06 43.9 3.1 69 28-99 4-79 (333)
376 1tt7_A YHFP; alcohol dehydroge 93.2 0.049 1.7E-06 43.2 2.9 92 24-119 147-246 (330)
377 3me5_A Cytosine-specific methy 93.2 0.079 2.7E-06 45.0 4.2 73 27-99 88-179 (482)
378 1yb5_A Quinone oxidoreductase; 93.0 0.019 6.4E-07 46.4 0.1 92 23-119 167-268 (351)
379 1boo_A Protein (N-4 cytosine-s 93.0 0.053 1.8E-06 43.4 2.8 54 70-123 12-87 (323)
380 4a27_A Synaptic vesicle membra 92.9 0.033 1.1E-06 44.7 1.5 90 23-119 139-237 (349)
381 3gaz_A Alcohol dehydrogenase s 92.8 0.03 1E-06 44.9 1.1 90 24-120 148-246 (343)
382 1zsy_A Mitochondrial 2-enoyl t 92.7 0.093 3.2E-06 42.2 3.9 92 23-119 164-269 (357)
383 4dcm_A Ribosomal RNA large sub 92.3 0.62 2.1E-05 38.0 8.4 101 13-120 25-136 (375)
384 3llv_A Exopolyphosphatase-rela 92.2 0.11 3.6E-06 35.9 3.2 88 28-122 7-105 (141)
385 3qv2_A 5-cytosine DNA methyltr 92.0 0.1 3.6E-06 42.0 3.4 73 26-102 9-89 (327)
386 4a0s_A Octenoyl-COA reductase/ 92.0 0.38 1.3E-05 39.8 6.9 92 23-119 217-335 (447)
387 1h2b_A Alcohol dehydrogenase; 91.9 0.047 1.6E-06 44.0 1.2 91 23-119 183-284 (359)
388 3ps9_A TRNA 5-methylaminomethy 91.8 0.086 3E-06 46.1 2.8 95 26-120 66-219 (676)
389 2zb4_A Prostaglandin reductase 91.5 0.062 2.1E-06 43.1 1.5 92 23-119 155-259 (357)
390 3c85_A Putative glutathione-re 91.1 0.41 1.4E-05 34.4 5.5 89 27-121 39-140 (183)
391 2aef_A Calcium-gated potassium 91.0 0.52 1.8E-05 35.3 6.2 89 27-122 9-107 (234)
392 3l9w_A Glutathione-regulated p 90.8 0.27 9.1E-06 40.8 4.8 83 34-121 10-103 (413)
393 2g1u_A Hypothetical protein TM 90.6 0.72 2.5E-05 32.2 6.3 92 25-121 17-119 (155)
394 3oig_A Enoyl-[acyl-carrier-pro 90.3 1.3 4.4E-05 33.5 8.0 74 26-99 6-97 (266)
395 3pi7_A NADH oxidoreductase; gr 89.8 0.03 1E-06 44.9 -1.8 88 25-119 162-262 (349)
396 1pjc_A Protein (L-alanine dehy 89.5 0.19 6.4E-06 40.8 2.7 91 27-120 167-267 (361)
397 3d4o_A Dipicolinate synthase s 89.2 2.4 8E-05 33.0 8.8 85 26-119 154-243 (293)
398 3ce6_A Adenosylhomocysteinase; 88.3 0.41 1.4E-05 40.8 4.0 84 25-119 272-360 (494)
399 3slk_A Polyketide synthase ext 88.3 0.39 1.3E-05 43.1 4.1 91 24-119 343-441 (795)
400 1gu7_A Enoyl-[acyl-carrier-pro 87.6 0.084 2.9E-06 42.4 -0.6 94 23-119 163-274 (364)
401 3ius_A Uncharacterized conserv 87.4 1.5 5.2E-05 33.2 6.6 65 28-100 6-74 (286)
402 3l4b_C TRKA K+ channel protien 87.2 1.1 3.7E-05 33.1 5.5 83 34-120 6-99 (218)
403 1lss_A TRK system potassium up 86.9 1.4 4.6E-05 29.5 5.4 88 28-121 5-103 (140)
404 3swr_A DNA (cytosine-5)-methyl 86.4 2.3 7.8E-05 39.3 8.1 71 26-99 539-628 (1002)
405 1id1_A Putative potassium chan 86.2 1.2 4.2E-05 30.8 5.0 91 28-122 4-107 (153)
406 2rir_A Dipicolinate synthase, 86.2 2.5 8.4E-05 33.0 7.3 85 26-119 156-245 (300)
407 2eez_A Alanine dehydrogenase; 86.1 0.57 2E-05 38.0 3.6 90 26-119 165-265 (369)
408 1lnq_A MTHK channels, potassiu 85.1 1.6 5.6E-05 34.4 5.8 83 34-122 121-213 (336)
409 2vhw_A Alanine dehydrogenase; 84.7 0.69 2.4E-05 37.7 3.5 91 26-120 167-268 (377)
410 3p2y_A Alanine dehydrogenase/p 84.6 2.8 9.5E-05 34.5 7.1 88 26-119 183-301 (381)
411 3trk_A Nonstructural polyprote 84.4 0.41 1.4E-05 37.9 1.8 39 82-120 203-259 (324)
412 1eg2_A Modification methylase 84.2 0.73 2.5E-05 36.8 3.4 51 73-123 39-109 (319)
413 1g60_A Adenine-specific methyl 84.1 0.48 1.6E-05 36.4 2.2 49 73-121 5-75 (260)
414 4dio_A NAD(P) transhydrogenase 83.5 3.3 0.00011 34.3 7.1 92 26-120 189-312 (405)
415 4gua_A Non-structural polyprot 83.0 0.67 2.3E-05 40.2 2.7 40 81-120 213-269 (670)
416 3dqp_A Oxidoreductase YLBE; al 82.1 3 0.0001 30.3 5.8 60 34-100 7-74 (219)
417 1zkd_A DUF185; NESG, RPR58, st 82.0 2.5 8.5E-05 34.8 5.8 70 5-76 52-140 (387)
418 3ew7_A LMO0794 protein; Q8Y8U8 80.4 6.3 0.00022 28.2 7.1 81 34-120 7-102 (221)
419 3oj0_A Glutr, glutamyl-tRNA re 80.3 6.9 0.00023 26.6 6.9 99 9-121 7-110 (144)
420 2hmt_A YUAA protein; RCK, KTN, 79.9 5 0.00017 26.7 6.0 88 27-121 6-105 (144)
421 3gvp_A Adenosylhomocysteinase 79.2 8 0.00027 32.3 8.0 82 26-118 219-305 (435)
422 3av4_A DNA (cytosine-5)-methyl 79.1 3.8 0.00013 39.0 6.5 71 26-99 850-939 (1330)
423 4ft4_B DNA (cytosine-5)-methyl 78.9 4 0.00014 36.2 6.4 39 26-64 211-257 (784)
424 3ic5_A Putative saccharopine d 78.8 3.8 0.00013 26.3 4.9 87 27-120 5-99 (118)
425 3grk_A Enoyl-(acyl-carrier-pro 78.6 4.8 0.00016 31.1 6.2 73 26-100 30-120 (293)
426 3nbm_A PTS system, lactose-spe 78.0 6.6 0.00022 26.2 6.0 82 25-121 4-85 (108)
427 3dmg_A Probable ribosomal RNA 77.4 2.2 7.6E-05 34.8 4.1 100 11-120 32-139 (381)
428 4g65_A TRK system potassium up 77.2 2.4 8.3E-05 35.4 4.4 59 34-96 9-75 (461)
429 3e8x_A Putative NAD-dependent 77.2 8 0.00027 28.3 6.9 70 26-100 20-95 (236)
430 3o26_A Salutaridine reductase; 77.1 5.2 0.00018 30.4 6.0 73 27-100 12-102 (311)
431 3eag_A UDP-N-acetylmuramate:L- 76.4 5.8 0.0002 31.3 6.2 94 27-124 4-118 (326)
432 3iup_A Putative NADPH:quinone 76.3 0.29 9.9E-06 39.7 -1.6 89 25-117 169-273 (379)
433 3hn7_A UDP-N-acetylmuramate-L- 76.0 5.8 0.0002 33.6 6.4 95 25-124 17-132 (524)
434 4f3n_A Uncharacterized ACR, CO 74.6 1.3 4.6E-05 37.0 2.0 58 5-63 112-182 (432)
435 3pxx_A Carveol dehydrogenase; 72.9 14 0.00049 27.7 7.5 73 26-99 9-109 (287)
436 1l7d_A Nicotinamide nucleotide 72.9 3.1 0.00011 33.8 3.8 92 26-120 171-294 (384)
437 4eso_A Putative oxidoreductase 71.8 6.8 0.00023 29.4 5.3 73 26-100 7-93 (255)
438 4dkj_A Cytosine-specific methy 71.4 2.9 9.9E-05 34.5 3.3 37 27-63 10-54 (403)
439 4hv4_A UDP-N-acetylmuramate--L 71.3 12 0.00041 31.4 7.2 93 25-124 20-132 (494)
440 3ond_A Adenosylhomocysteinase; 71.1 32 0.0011 29.1 9.7 82 26-118 264-350 (488)
441 1x13_A NAD(P) transhydrogenase 70.4 2.4 8.4E-05 34.8 2.7 89 26-120 171-292 (401)
442 1y1p_A ARII, aldehyde reductas 70.1 16 0.00054 28.0 7.3 74 26-100 10-94 (342)
443 3vtf_A UDP-glucose 6-dehydroge 69.1 3.1 0.0001 34.9 3.0 31 34-64 27-61 (444)
444 3k31_A Enoyl-(acyl-carrier-pro 68.6 8.2 0.00028 29.7 5.3 72 27-100 30-119 (296)
445 2gn4_A FLAA1 protein, UDP-GLCN 68.4 11 0.00038 29.6 6.1 75 26-102 20-104 (344)
446 2b69_A UDP-glucuronate decarbo 68.2 20 0.00068 27.7 7.5 72 26-100 26-102 (343)
447 3g0o_A 3-hydroxyisobutyrate de 67.6 11 0.00038 29.1 5.9 85 28-122 8-103 (303)
448 3dfz_A SIRC, precorrin-2 dehyd 67.5 29 0.00098 26.1 8.0 90 25-123 29-124 (223)
449 4g65_A TRK system potassium up 66.5 20 0.00067 29.9 7.5 69 25-97 233-308 (461)
450 2vz8_A Fatty acid synthase; tr 66.3 6.8 0.00023 39.7 5.2 94 24-119 1665-1769(2512)
451 3n58_A Adenosylhomocysteinase; 65.8 25 0.00085 29.6 7.9 85 25-121 245-334 (464)
452 3gpi_A NAD-dependent epimerase 65.1 3.8 0.00013 31.0 2.6 61 28-98 4-72 (286)
453 1tvm_A PTS system, galactitol- 64.8 19 0.00064 23.9 5.8 60 27-100 21-80 (113)
454 2hwk_A Helicase NSP2; rossman 64.6 4 0.00014 32.5 2.7 35 88-122 205-256 (320)
455 3o38_A Short chain dehydrogena 64.6 18 0.00062 26.9 6.4 73 27-99 22-111 (266)
456 3h9u_A Adenosylhomocysteinase; 64.6 15 0.00051 30.7 6.3 82 26-118 210-296 (436)
457 3qvo_A NMRA family protein; st 64.3 13 0.00043 27.3 5.4 85 29-119 25-123 (236)
458 3h2s_A Putative NADH-flavin re 64.1 12 0.0004 26.9 5.1 81 34-119 7-103 (224)
459 4a7p_A UDP-glucose dehydrogena 61.9 11 0.00039 31.3 5.2 31 34-64 14-48 (446)
460 1rpn_A GDP-mannose 4,6-dehydra 61.8 4.2 0.00014 31.4 2.4 76 25-100 12-97 (335)
461 1rjd_A PPM1P, carboxy methyl t 61.6 23 0.00078 28.2 6.7 94 25-119 96-231 (334)
462 3lk7_A UDP-N-acetylmuramoylala 60.7 12 0.0004 30.9 5.0 94 26-124 8-122 (451)
463 3gg2_A Sugar dehydrogenase, UD 60.7 10 0.00036 31.5 4.7 31 34-64 8-42 (450)
464 2c29_D Dihydroflavonol 4-reduc 60.2 14 0.00048 28.4 5.2 72 27-99 5-87 (337)
465 3ggo_A Prephenate dehydrogenas 59.9 14 0.00049 28.9 5.2 85 28-121 34-128 (314)
466 1e2b_A Enzyme IIB-cellobiose; 59.3 3.7 0.00013 27.2 1.4 68 28-110 4-71 (106)
467 3i83_A 2-dehydropantoate 2-red 59.3 20 0.0007 27.8 6.0 88 29-119 4-104 (320)
468 3ruf_A WBGU; rossmann fold, UD 58.8 11 0.00037 29.2 4.3 88 11-100 11-111 (351)
469 2ew2_A 2-dehydropantoate 2-red 58.8 8.6 0.00029 29.3 3.7 35 29-64 5-43 (316)
470 4fs3_A Enoyl-[acyl-carrier-pro 58.7 30 0.001 25.9 6.7 61 39-99 24-96 (256)
471 4fn4_A Short chain dehydrogena 58.7 28 0.00095 26.5 6.5 73 26-99 6-94 (254)
472 2rh8_A Anthocyanidin reductase 58.6 12 0.00041 28.8 4.5 72 27-99 9-90 (338)
473 2km1_A Protein DRE2; yeast, an 57.9 6.5 0.00022 27.6 2.5 62 56-118 21-96 (136)
474 1v8b_A Adenosylhomocysteinase; 57.1 31 0.001 29.1 7.0 85 26-122 256-345 (479)
475 3pk0_A Short-chain dehydrogena 57.0 27 0.00091 26.1 6.2 74 26-99 9-98 (262)
476 3g79_A NDP-N-acetyl-D-galactos 56.9 24 0.00082 29.7 6.3 37 26-63 17-63 (478)
477 4gx0_A TRKA domain protein; me 56.8 14 0.00046 31.3 4.9 86 28-123 349-445 (565)
478 4gx0_A TRKA domain protein; me 56.4 16 0.00053 30.9 5.2 59 34-96 133-199 (565)
479 1yqg_A Pyrroline-5-carboxylate 55.4 34 0.0012 25.3 6.5 77 34-120 6-87 (263)
480 3e48_A Putative nucleoside-dip 54.4 36 0.0012 25.4 6.6 63 34-101 7-77 (289)
481 3r3s_A Oxidoreductase; structu 54.0 36 0.0012 25.9 6.6 72 27-99 49-138 (294)
482 2f1k_A Prephenate dehydrogenas 53.7 21 0.00073 26.8 5.1 79 34-121 6-91 (279)
483 3is3_A 17BETA-hydroxysteroid d 53.0 34 0.0012 25.6 6.2 94 27-121 18-153 (270)
484 4e2x_A TCAB9; kijanose, tetron 52.8 81 0.0028 25.1 8.8 87 25-122 317-412 (416)
485 2dpm_A M.dpnii 1, protein (ade 52.8 19 0.00065 28.0 4.8 46 12-61 23-69 (284)
486 1ae1_A Tropinone reductase-I; 52.7 27 0.00093 26.2 5.6 72 27-99 21-109 (273)
487 3rih_A Short chain dehydrogena 52.5 31 0.0011 26.5 6.0 73 27-99 41-129 (293)
488 1z82_A Glycerol-3-phosphate de 52.5 29 0.001 27.0 5.9 87 28-121 15-111 (335)
489 1oju_A MDH, malate dehydrogena 52.2 62 0.0021 25.1 7.7 84 34-122 6-120 (294)
490 2g5c_A Prephenate dehydrogenas 52.2 19 0.00064 27.2 4.6 80 34-121 7-96 (281)
491 1ez4_A Lactate dehydrogenase; 52.0 65 0.0022 25.2 7.9 88 27-120 5-121 (318)
492 1wma_A Carbonyl reductase [NAD 51.6 40 0.0014 24.7 6.3 72 26-99 3-92 (276)
493 1mv8_A GMD, GDP-mannose 6-dehy 51.0 13 0.00045 30.4 3.8 31 34-64 6-40 (436)
494 3vku_A L-LDH, L-lactate dehydr 50.9 90 0.0031 24.6 9.2 92 25-121 7-126 (326)
495 1g0o_A Trihydroxynaphthalene r 50.5 42 0.0014 25.2 6.4 72 27-100 29-118 (283)
496 4ezb_A Uncharacterized conserv 49.0 23 0.0008 27.6 4.8 82 28-122 25-122 (317)
497 2xxj_A L-LDH, L-lactate dehydr 49.0 60 0.002 25.3 7.2 81 34-119 6-115 (310)
498 3snk_A Response regulator CHEY 48.7 32 0.0011 22.2 4.9 72 48-122 15-96 (135)
499 1hyh_A L-hicdh, L-2-hydroxyiso 48.4 47 0.0016 25.6 6.5 64 34-101 7-81 (309)
500 2ae2_A Protein (tropinone redu 48.2 31 0.0011 25.6 5.3 73 26-99 8-97 (260)
No 1
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.93 E-value=6.4e-25 Score=166.99 Aligned_cols=145 Identities=23% Similarity=0.299 Sum_probs=130.2
Q ss_pred CchHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC
Q psy8015 9 SVSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG 85 (165)
Q Consensus 9 ~~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~ 85 (165)
+.+..++++++.+. ..++.+|||+ ||+|+++..+++...+|+++|+++++++.|+ ++..+.+|++++.+|+.+.++
T Consensus 61 ~~~~~~~~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 139 (210)
T 3lbf_A 61 SQPYMVARMTELLE-LTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ 139 (210)
T ss_dssp CCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG
T ss_pred CCHHHHHHHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc
Confidence 46778889999885 4889999999 9999999999999899999999999999996 666788899999999987666
Q ss_pred CCCCccEEEEcCCCCCchHHHHhccccCcEEEEEecCCCceEEEEEEEccCCcEEEEEeeeEEEeeeccCC
Q psy8015 86 DNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFHNGTIDIQHWGVVQVGLLYDVK 156 (165)
Q Consensus 86 ~~~~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~~~pl~~~~ 156 (165)
+.++||+|+++...+++++.+.++|||||++++++++ +.+.+..++|.. +.|..+.++.++|.||+++.
T Consensus 140 ~~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~f~pl~~~~ 208 (210)
T 3lbf_A 140 ARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGE-EHQYLKRVRRRG-GEFIIDTVEAVRFVPLVKGE 208 (210)
T ss_dssp GGCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEECS-SSCEEEEEEEET-TEEEEEEEEECCCCBCCCSS
T ss_pred cCCCccEEEEccchhhhhHHHHHhcccCcEEEEEEcC-CceEEEEEEEcC-CeEEEEEeccEEEEEccCcc
Confidence 6689999999999999999999999999999999988 458888888864 57999999999999999875
No 2
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.92 E-value=1.1e-24 Score=168.12 Aligned_cols=145 Identities=29% Similarity=0.368 Sum_probs=126.1
Q ss_pred CCchHHHHHHHHHHh-cCCCCCeEEEE-ccccHHHHHHhccC--------CcEEEEeCCHHHHHhcc--cccCC-----C
Q psy8015 8 GSVSGAVAKYVTYLS-GHSKRLDCLAL-TSNTKQSTTLPTFI--------PNSFNINVYYYLSGGPL--SSTID-----P 70 (165)
Q Consensus 8 ~~~~~~~~~~l~~l~-~~~~~~~vLei-~GsG~~t~~la~~~--------~~V~aiD~~~~~~~~A~--~~~~~-----~ 70 (165)
.|.+..++++++++. ...++.+|||+ ||+|+++..+++.. ++|+++|+++++++.|+ ++..+ .
T Consensus 65 ~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~ 144 (227)
T 1r18_A 65 ISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDS 144 (227)
T ss_dssp ECCHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCC
Confidence 357888999999985 24788999999 99999999999864 38999999999999996 44444 5
Q ss_pred CCeEEEEccCCCCCCCCCCccEEEEcCCCCCchHHHHhccccCcEEEEEecCC-CceEEEEEEEccCCcEEEEEeeeEEE
Q psy8015 71 DHDYDLIADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDT-KQQMLTIYDKFHNGTIDIQHWGVVQV 149 (165)
Q Consensus 71 ~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~~~~~-~~~~~~~~~k~~~~~~~~~~l~~~~~ 149 (165)
+|++++.+|+.+.+++.++||+|+++...+++++.+.++|||||+++++++.. ..+.+..++|..++.|+.+.++++.|
T Consensus 145 ~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~ 224 (227)
T 1r18_A 145 GQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMY 224 (227)
T ss_dssp TSEEEEESCGGGCCGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEESCSSSCEEEEEEEECTTSCEEEEEEEEECC
T ss_pred CceEEEECCcccCCCcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEEecCCCceEEEEEEEcCCCcEEEEEeccEEE
Confidence 68999999998766655789999999999999999999999999999999864 34899999997777899999999999
Q ss_pred eee
Q psy8015 150 GLL 152 (165)
Q Consensus 150 ~pl 152 (165)
+||
T Consensus 225 ~p~ 227 (227)
T 1r18_A 225 VPL 227 (227)
T ss_dssp CCC
T ss_pred eeC
Confidence 996
No 3
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.91 E-value=1.5e-23 Score=162.69 Aligned_cols=147 Identities=24% Similarity=0.316 Sum_probs=129.6
Q ss_pred CchHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC
Q psy8015 9 SVSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF 84 (165)
Q Consensus 9 ~~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~ 84 (165)
+.+...+.+++.+. ..++.+|||+ ||+|+++..+++.. .+|+++|+++++++.|+ ++..+.+|++++.+|+...+
T Consensus 75 ~~~~~~~~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 153 (235)
T 1jg1_A 75 SAPHMVAIMLEIAN-LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF 153 (235)
T ss_dssp CCHHHHHHHHHHHT-CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC
T ss_pred ccHHHHHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCC
Confidence 46778889999885 4789999999 99999999999987 89999999999999996 56678888999999986566
Q ss_pred CCCCCccEEEEcCCCCCchHHHHhccccCcEEEEEecCCCc-eEEEEEEEccCCcEEEEEeeeEEEeeeccCCC
Q psy8015 85 GDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQ-QMLTIYDKFHNGTIDIQHWGVVQVGLLYDVKA 157 (165)
Q Consensus 85 ~~~~~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~~~~~~~-~~~~~~~k~~~~~~~~~~l~~~~~~pl~~~~~ 157 (165)
++..+||+|+++...+++++.+.++|||||+++++++.... +.+..++|. ++.|+.+.+++++|+|+++..+
T Consensus 154 ~~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~f~p~~~~~~ 226 (235)
T 1jg1_A 154 PPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVGSYHLWQELLEVRKT-KDGIKIKNHGGVAFVPLIGEYG 226 (235)
T ss_dssp GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEECSSSSCEEEEEEEEE-TTEEEEEEEEEECCCBCBSTTS
T ss_pred CCCCCccEEEECCcHHHHHHHHHHhcCCCcEEEEEEecCCCccEEEEEEEe-CCeEEEEEeccEEEEEccCCCc
Confidence 55567999999999999999999999999999999987665 888888885 5689999999999999999863
No 4
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.91 E-value=5.5e-24 Score=163.76 Aligned_cols=146 Identities=21% Similarity=0.151 Sum_probs=125.6
Q ss_pred CCchHHHHHHHHHHh-cCCCCCeEEEE-ccccHHHHHHhccCC-------cEEEEeCCHHHHHhcc--cccCC-----CC
Q psy8015 8 GSVSGAVAKYVTYLS-GHSKRLDCLAL-TSNTKQSTTLPTFIP-------NSFNINVYYYLSGGPL--SSTID-----PD 71 (165)
Q Consensus 8 ~~~~~~~~~~l~~l~-~~~~~~~vLei-~GsG~~t~~la~~~~-------~V~aiD~~~~~~~~A~--~~~~~-----~~ 71 (165)
.+.+...+++++++. ...++.+|||+ ||+|+++..+++..+ +|+++|+++++++.|+ ++..+ .+
T Consensus 61 ~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 140 (227)
T 2pbf_A 61 ISAPHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKID 140 (227)
T ss_dssp ECCHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSST
T ss_pred cCChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccC
Confidence 346778889999985 24789999999 999999999999875 9999999999999996 44445 57
Q ss_pred CeEEEEccCCCCC----CCCCCccEEEEcCCCCCchHHHHhccccCcEEEEEecCCCceEEEEEEEccCCcEEEEEeeeE
Q psy8015 72 HDYDLIADGRASF----GDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFHNGTIDIQHWGVV 147 (165)
Q Consensus 72 nV~~~~gD~~~~~----~~~~~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~~~~~~~~~~~~~~k~~~~~~~~~~l~~~ 147 (165)
|++++.+|+.+.+ ...++||+|+++...+++++.+.++|||||+++++++....+.+..++| .++.|+.+.++++
T Consensus 141 ~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 219 (227)
T 2pbf_A 141 NFKIIHKNIYQVNEEEKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPIEEDYTQVLYEITK-KNGKIIKDRLFDV 219 (227)
T ss_dssp TEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEEETTEEEEEEEEC-SCC-CEEEEEEEE
T ss_pred CEEEEECChHhcccccCccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEccCCceEEEEEEE-eCCeEEEEEeccE
Confidence 8999999998765 4457899999999999999999999999999999998755588888888 5678999999999
Q ss_pred EEeeecc
Q psy8015 148 QVGLLYD 154 (165)
Q Consensus 148 ~~~pl~~ 154 (165)
+|+||++
T Consensus 220 ~~~pl~~ 226 (227)
T 2pbf_A 220 CFVSLKK 226 (227)
T ss_dssp CCCBCCC
T ss_pred EEEeccC
Confidence 9999975
No 5
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.89 E-value=9.7e-23 Score=155.40 Aligned_cols=148 Identities=24% Similarity=0.325 Sum_probs=129.2
Q ss_pred CchHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCC
Q psy8015 9 SVSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRA 82 (165)
Q Consensus 9 ~~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~ 82 (165)
+.+...+.+++.+. ..++.+|||+ ||+|+++..+++.. .+|+++|+++++++.|+ ++..+.+|++++.+|+..
T Consensus 61 ~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 139 (215)
T 2yxe_A 61 SAIHMVGMMCELLD-LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTL 139 (215)
T ss_dssp CCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGG
T ss_pred CcHHHHHHHHHhhC-CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc
Confidence 34677888888885 4789999999 99999999999987 68999999999999996 555677889999999866
Q ss_pred CCCCCCCccEEEEcCCCCCchHHHHhccccCcEEEEEecCCCceEEEEEEEccCCcEEEEEeeeEEEeeeccCCCCCC
Q psy8015 83 SFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFHNGTIDIQHWGVVQVGLLYDVKAGYS 160 (165)
Q Consensus 83 ~~~~~~~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~~~pl~~~~~~~~ 160 (165)
.++..++||+|+++...+++++.+.++|||||++++.+++.+ +.+..+.|.. +.|..+.++.+.|.|+.+.. .|+
T Consensus 140 ~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~-~~~ 214 (215)
T 2yxe_A 140 GYEPLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVGRYL-QRLVLAEKRG-DEIIIKDCGPVAFVPLVGKE-GFQ 214 (215)
T ss_dssp CCGGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEESSSS-EEEEEEEEET-TEEEEEEEEEECCCBCBSTT-SBC
T ss_pred CCCCCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEECCCC-cEEEEEEEeC-CEEEEEEeccEEEEeccccc-cCC
Confidence 555457899999999999999999999999999999998877 8999998874 47999999999999999885 564
No 6
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.89 E-value=6.7e-23 Score=157.60 Aligned_cols=152 Identities=28% Similarity=0.430 Sum_probs=127.8
Q ss_pred CchHHHHHHHHHHh-cCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCC-----CCCeEEE
Q psy8015 9 SVSGAVAKYVTYLS-GHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTID-----PDHDYDL 76 (165)
Q Consensus 9 ~~~~~~~~~l~~l~-~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~-----~~nV~~~ 76 (165)
+.+...+.+++++. ...++.+|||+ ||+|+.+..+++.. ++|+++|+++++++.|+ ++..+ .+|++++
T Consensus 59 ~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~ 138 (226)
T 1i1n_A 59 SAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLV 138 (226)
T ss_dssp CCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEE
T ss_pred cCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEE
Confidence 46778888999885 23689999999 99999999999875 58999999999999996 44433 4689999
Q ss_pred EccCCCCCCCCCCccEEEEcCCCCCchHHHHhccccCcEEEEEecCCCc-eEEEEEEEccCCcEEEEEeeeEEEeeeccC
Q psy8015 77 IADGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQ-QMLTIYDKFHNGTIDIQHWGVVQVGLLYDV 155 (165)
Q Consensus 77 ~gD~~~~~~~~~~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~~~~~~~-~~~~~~~k~~~~~~~~~~l~~~~~~pl~~~ 155 (165)
.+|+.......++||+|+++...+++++.+.++|||||++++++.+... +.+..+.|..++.|+.+.++++.|+|+.+.
T Consensus 139 ~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~p~~~~ 218 (226)
T 1i1n_A 139 VGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSIKMKPLMGVIYVPLTDK 218 (226)
T ss_dssp ESCGGGCCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEESCTTSCEEEEEEEECTTSCEEEEEEEEECCCBCCCH
T ss_pred ECCcccCcccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEecCCCceEEEEEEEcCCCcEEEEEcCceEEEeccCC
Confidence 9998765554578999999999999999999999999999999987543 677778887677899999999999999987
Q ss_pred CCCCC
Q psy8015 156 KAGYS 160 (165)
Q Consensus 156 ~~~~~ 160 (165)
...|.
T Consensus 219 ~~~~~ 223 (226)
T 1i1n_A 219 EKQWS 223 (226)
T ss_dssp HHHCC
T ss_pred ccccc
Confidence 43454
No 7
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.85 E-value=5.2e-21 Score=155.10 Aligned_cols=150 Identities=15% Similarity=0.191 Sum_probs=127.6
Q ss_pred EecCCchHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCc---EEEEeCCHHHHHhcc--cccCCCCCeEEEEc
Q psy8015 5 FVSGSVSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPN---SFNINVYYYLSGGPL--SSTIDPDHDYDLIA 78 (165)
Q Consensus 5 ~~~~~~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~---V~aiD~~~~~~~~A~--~~~~~~~nV~~~~g 78 (165)
|...+.+...+.+++.+. ..++++|||| ||+|+++..+++..++ |+++|+++++++.|+ ++..+++|++++.+
T Consensus 55 ~q~~~~~~~~~~l~~~l~-~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~ 133 (317)
T 1dl5_A 55 YSTSSQPSLMALFMEWVG-LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG 133 (317)
T ss_dssp EEEECCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred ceeccCHHHHHHHHHhcC-CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 445567788899999885 4789999999 9999999999987655 999999999999996 56678888999999
Q ss_pred cCCCCCCCCCCccEEEEcCCCCCchHHHHhccccCcEEEEEecCCC--ceEEEEEEEccCCcEEEEEeeeEEEeeeccCC
Q psy8015 79 DGRASFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTK--QQMLTIYDKFHNGTIDIQHWGVVQVGLLYDVK 156 (165)
Q Consensus 79 D~~~~~~~~~~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~~~~~~--~~~~~~~~k~~~~~~~~~~l~~~~~~pl~~~~ 156 (165)
|+.+.++..++||+|+++...+++++.+.+.|||||++++.+++.. .+.+..+.+.. +.|..+.++...+.|+...-
T Consensus 134 d~~~~~~~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~p~~~~~ 212 (317)
T 1dl5_A 134 DGYYGVPEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPINLKLSRRQPAFLFKKKD-PYLVGNYKLETRFITAGGNL 212 (317)
T ss_dssp CGGGCCGGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEBCBGGGTBCEEEEEEEET-TEEEEEEEEECCCCBCCGGG
T ss_pred ChhhccccCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEECCCCcccceEEEEEEeC-CcEEEEEeccEEEEEccCcc
Confidence 9977555557899999999999999999999999999999987653 36777777765 47999999999999987653
No 8
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.85 E-value=1.8e-20 Score=144.21 Aligned_cols=146 Identities=18% Similarity=0.225 Sum_probs=124.4
Q ss_pred CchHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC
Q psy8015 9 SVSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG 85 (165)
Q Consensus 9 ~~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~ 85 (165)
+.+...+.+++.+. ..++.+|||+ ||+|+++..+++...+|+++|+++++++.|+ .+..+ |++++.+|+.+.++
T Consensus 54 ~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~ 130 (231)
T 1vbf_A 54 TALNLGIFMLDELD-LHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYE 130 (231)
T ss_dssp CCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCG
T ss_pred CCHHHHHHHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCcccccc
Confidence 35677888888885 4789999999 9999999999998899999999999999996 44444 89999999977555
Q ss_pred CCCCccEEEEcCCCCCchHHHHhccccCcEEEEEecCCCceEEEEEEEccCCcEEEEEeeeEEEeeeccCCCCC
Q psy8015 86 DNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTKQQMLTIYDKFHNGTIDIQHWGVVQVGLLYDVKAGY 159 (165)
Q Consensus 86 ~~~~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~~~pl~~~~~~~ 159 (165)
..++||+|+++...+++++.+.+.|||||++++.+++...+.+..+.+. .+.|+.+.++.+.|.|+.... +|
T Consensus 131 ~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-gf 202 (231)
T 1vbf_A 131 EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIGVGRVQKLYKVIKK-GNSPSLENLGEVMFGRIGGLY-GF 202 (231)
T ss_dssp GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEECSSSSEEEEEEECC-TTSCEEEEEEEECCCBCCSTT-SC
T ss_pred cCCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEEcCCCccEEEEEEEc-CCeeEEEEeccEEEEEcCCcc-ch
Confidence 4578999999999999999999999999999999987665777777765 357999999999999998774 55
No 9
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.78 E-value=3.3e-19 Score=136.14 Aligned_cols=149 Identities=15% Similarity=0.062 Sum_probs=111.5
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFGD 86 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~~ 86 (165)
....+.+++.+. ..++++|||+ ||+|+++..+++...+|+++|+++++++.|+ .+..+.+ |++++.+|+.+.++.
T Consensus 41 ~~~~~~~l~~l~-~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~ 119 (204)
T 3njr_A 41 SPMRALTLAALA-PRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD 119 (204)
T ss_dssp HHHHHHHHHHHC-CCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT
T ss_pred HHHHHHHHHhcC-CCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc
Confidence 344556777774 4789999999 9999999999998889999999999999996 5667887 899999999875555
Q ss_pred CCCccEEEEcCCCCC-chHHHHhccccCcEEEEEecCCC-ceEEEEEEEccCCcEEEEEeeeEEEeeeccCCCCCC--CC
Q psy8015 87 NGPYDAIHVGAAYPR-YPEIFIHHLKSGGRLVIPIGDTK-QQMLTIYDKFHNGTIDIQHWGVVQVGLLYDVKAGYS--MP 162 (165)
Q Consensus 87 ~~~fD~I~i~~~~~~-~p~~l~~~LkpgG~lvi~~~~~~-~~~~~~~~k~~~~~~~~~~l~~~~~~pl~~~~~~~~--~~ 162 (165)
..+||+|+++..... +.+.+.+.|||||++++...... ...+..+.+.. .+....+......++.... +|. +|
T Consensus 120 ~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~--g~~i~~i~~~~~~~~~~~~-~~~~~~P 196 (204)
T 3njr_A 120 LPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAVTLESETLLTQLHARH--GGQLLRIDIAQAEPLGRMR-GWSASRP 196 (204)
T ss_dssp SCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHH--CSEEEEEEEEEEEEETTEE-EECCCCC
T ss_pred CCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhC--CCcEEEEEeecccccCccc-eeecCCC
Confidence 568999999876532 55778899999999999876432 12222222322 2666666666777776654 554 66
Q ss_pred C
Q psy8015 163 I 163 (165)
Q Consensus 163 ~ 163 (165)
|
T Consensus 197 v 197 (204)
T 3njr_A 197 Q 197 (204)
T ss_dssp E
T ss_pred E
Confidence 5
No 10
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.75 E-value=3.4e-18 Score=129.40 Aligned_cols=151 Identities=13% Similarity=0.062 Sum_probs=105.7
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG 85 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~ 85 (165)
....+.+++.+. ..++.+|||+ ||+|+++..+++.. .+|+++|+++++++.|+ .+..+.+|++++.+|+.+.++
T Consensus 26 ~~i~~~~l~~l~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 104 (204)
T 3e05_A 26 QEVRAVTLSKLR-LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD 104 (204)
T ss_dssp HHHHHHHHHHTT-CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT
T ss_pred HHHHHHHHHHcC-CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh
Confidence 344466777774 4789999999 99999999999987 78999999999999996 555677889999999977666
Q ss_pred CCCCccEEEEcCCCCCch---HHHHhccccCcEEEEEecCCC-ceEEEEEEEccCCcEEEEEeeeEEEeeeccCCCCCC-
Q psy8015 86 DNGPYDAIHVGAAYPRYP---EIFIHHLKSGGRLVIPIGDTK-QQMLTIYDKFHNGTIDIQHWGVVQVGLLYDVKAGYS- 160 (165)
Q Consensus 86 ~~~~fD~I~i~~~~~~~p---~~l~~~LkpgG~lvi~~~~~~-~~~~~~~~k~~~~~~~~~~l~~~~~~pl~~~~~~~~- 160 (165)
..++||+|+++...+... +.+.+.|||||++++...... ...+..+.+..+-.+....+......++.... .|.
T Consensus 105 ~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 183 (204)
T 3e05_A 105 DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKGLTEYK-MFES 183 (204)
T ss_dssp TSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEEEEEEEEEEEC---CCC-BCEE
T ss_pred cCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCCceeEEEEEeecceEccceE-Eecc
Confidence 557899999998876444 567899999999999764321 12222222221112333444444555555543 553
Q ss_pred -CCC
Q psy8015 161 -MPI 163 (165)
Q Consensus 161 -~~~ 163 (165)
+|+
T Consensus 184 ~~Pv 187 (204)
T 3e05_A 184 HNPV 187 (204)
T ss_dssp CCCE
T ss_pred CCCe
Confidence 665
No 11
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.69 E-value=8.4e-17 Score=119.68 Aligned_cols=96 Identities=18% Similarity=0.207 Sum_probs=77.5
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCC--CCCCCCccEEEEcC-C
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRAS--FGDNGPYDAIHVGA-A 98 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~--~~~~~~fD~I~i~~-~ 98 (165)
.++++|||+ ||+|+++..+++...+|+++|+|++|++.|+ .+..+++|++++++|.... +. .++||+|+++. .
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~-~~~fD~v~~~~~~ 99 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYV-REPIRAAIFNLGY 99 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTC-CSCEEEEEEEEC-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhc-cCCcCEEEEeCCC
Confidence 689999999 9999999999999889999999999999996 5556778999999776542 33 56899999873 3
Q ss_pred CCC-------ch-------HHHHhccccCcEEEEEec
Q psy8015 99 YPR-------YP-------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 99 ~~~-------~p-------~~l~~~LkpgG~lvi~~~ 121 (165)
.+. .+ +++.+.|||||++++.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 332 33 567899999999999764
No 12
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.69 E-value=2.3e-17 Score=127.58 Aligned_cols=109 Identities=11% Similarity=0.035 Sum_probs=88.0
Q ss_pred chHHHHHHHHHHhcCCCCC---eEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCC--CeEEEEc
Q psy8015 10 VSGAVAKYVTYLSGHSKRL---DCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPD--HDYDLIA 78 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~---~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~--nV~~~~g 78 (165)
++...+.++..+....+.+ +|||| ||+|+.|.++++.. ++|+++|+++++++.|+ +++.|.. +++++.+
T Consensus 37 i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g 116 (221)
T 3dr5_A 37 PDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS 116 (221)
T ss_dssp CCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc
Confidence 4556666777665444444 99999 99999999999853 68999999999999996 6667775 7999999
Q ss_pred cCCCCCCC--CCCccEEEEcCCCCCch---HHHHhccccCcEEEE
Q psy8015 79 DGRASFGD--NGPYDAIHVGAAYPRYP---EIFIHHLKSGGRLVI 118 (165)
Q Consensus 79 D~~~~~~~--~~~fD~I~i~~~~~~~p---~~l~~~LkpgG~lvi 118 (165)
|+.+.++. .++||+||+++...+++ +.+.+.|||||++++
T Consensus 117 da~~~l~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 117 RPLDVMSRLANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp CHHHHGGGSCTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHhcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEE
Confidence 98664332 47899999998887665 467899999999998
No 13
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.69 E-value=3.9e-17 Score=124.30 Aligned_cols=111 Identities=11% Similarity=-0.052 Sum_probs=86.6
Q ss_pred CCchHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccc-cC-------------CCCC
Q psy8015 8 GSVSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSS-TI-------------DPDH 72 (165)
Q Consensus 8 ~~~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~-~~-------------~~~n 72 (165)
+.+.....++++.+. ..++.+|||+ ||+|..+..|++...+|+++|+|++|++.|+.+ .. ...|
T Consensus 5 ~~~~~~l~~~~~~l~-~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 83 (203)
T 1pjz_A 5 SEVNKDLQQYWSSLN-VVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPG 83 (203)
T ss_dssp SSSTHHHHHHHHHHC-CCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSS
T ss_pred ccCCHHHHHHHHhcc-cCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCc
Confidence 345556677777774 4688999999 999999999999888999999999999999722 11 2358
Q ss_pred eEEEEccCCCCCCCC-CCccEEEEcCCCCCchH--------HHHhccccCcEEEEE
Q psy8015 73 DYDLIADGRASFGDN-GPYDAIHVGAAYPRYPE--------IFIHHLKSGGRLVIP 119 (165)
Q Consensus 73 V~~~~gD~~~~~~~~-~~fD~I~i~~~~~~~p~--------~l~~~LkpgG~lvi~ 119 (165)
++++++|+.+..... ++||+|+..+..+++++ ++.+.|||||++++.
T Consensus 84 v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 84 IEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp SEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred cEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 999999987643332 68999999887766542 478999999994443
No 14
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.69 E-value=1.3e-16 Score=123.62 Aligned_cols=114 Identities=7% Similarity=0.054 Sum_probs=93.9
Q ss_pred cCCchHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCC
Q psy8015 7 SGSVSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRAS 83 (165)
Q Consensus 7 ~~~~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~ 83 (165)
|.|+......+++++. ..++.+|||+ ||+|.++..+++...+|+++|+++++++.|+ .+..+.+|++++.+|+...
T Consensus 3 ~~~~~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 81 (239)
T 1xxl_A 3 HHHHHHSLGLMIKTAE-CRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL 81 (239)
T ss_dssp ---CHHHHHHHHHHHT-CCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC
T ss_pred ccccCCCcchHHHHhC-cCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC
Confidence 4567777888999986 4899999999 9999999999998899999999999999996 4555777999999998764
Q ss_pred CCCCCCccEEEEcCCCCCch------HHHHhccccCcEEEEEec
Q psy8015 84 FGDNGPYDAIHVGAAYPRYP------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 84 ~~~~~~fD~I~i~~~~~~~p------~~l~~~LkpgG~lvi~~~ 121 (165)
..+.++||+|++....++++ .++.+.|||||++++...
T Consensus 82 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 82 PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 33457899999998776554 367899999999998643
No 15
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.68 E-value=1.6e-16 Score=124.25 Aligned_cols=108 Identities=12% Similarity=0.118 Sum_probs=89.8
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCC
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNG 88 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~ 88 (165)
.....+++.+. ..++.+|||+ ||+|.++..+++...+|+++|++++|++.|+ .+..+.+|++++.+|+.+...+.+
T Consensus 24 ~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~ 102 (260)
T 1vl5_A 24 SDLAKLMQIAA-LKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDE 102 (260)
T ss_dssp CCHHHHHHHHT-CCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTT
T ss_pred HHHHHHHHHhC-CCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCC
Confidence 34667778775 4789999999 9999999999998889999999999999996 555677799999999876333457
Q ss_pred CccEEEEcCCCCCch------HHHHhccccCcEEEEEe
Q psy8015 89 PYDAIHVGAAYPRYP------EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 89 ~fD~I~i~~~~~~~p------~~l~~~LkpgG~lvi~~ 120 (165)
+||+|++....++++ .++.+.|||||++++..
T Consensus 103 ~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 103 RFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 899999998887665 35789999999999863
No 16
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.68 E-value=2.2e-16 Score=116.12 Aligned_cols=110 Identities=13% Similarity=0.061 Sum_probs=90.4
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASF 84 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~ 84 (165)
....+.+++.+. ..++.+|||+ ||+|.++..+++. ..+|+++|+++++++.|+ ++..+.+ |+ ++.+|+.+.+
T Consensus 11 ~~~~~~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~ 88 (178)
T 3hm2_A 11 QHVRALAISALA-PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAF 88 (178)
T ss_dssp HHHHHHHHHHHC-CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGG
T ss_pred HHHHHHHHHHhc-ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhh
Confidence 445667777774 4789999999 9999999999987 468999999999999996 5667776 89 8899987655
Q ss_pred CCC-CCccEEEEcCCCCC--chHHHHhccccCcEEEEEecC
Q psy8015 85 GDN-GPYDAIHVGAAYPR--YPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 85 ~~~-~~fD~I~i~~~~~~--~p~~l~~~LkpgG~lvi~~~~ 122 (165)
+.. ++||+|+++...++ +.+.+.+.|||||++++....
T Consensus 89 ~~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 89 DDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp GGCCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEECS
T ss_pred hccCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEeec
Confidence 543 78999999988776 567889999999999987653
No 17
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.68 E-value=6.7e-17 Score=125.21 Aligned_cols=106 Identities=16% Similarity=0.108 Sum_probs=85.8
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCC-
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFG- 85 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~- 85 (165)
..+.++..+....++.+|||+ ||+|+.+..+++. ..+|+++|+++++++.|+ ++..++. |++++.+|+.+.++
T Consensus 58 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 137 (232)
T 3ntv_A 58 LTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFEN 137 (232)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHH
T ss_pred HHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh
Confidence 344444444334678999999 9999999999984 479999999999999996 6667775 79999999977544
Q ss_pred C-CCCccEEEEcCCCCCch---HHHHhccccCcEEEE
Q psy8015 86 D-NGPYDAIHVGAAYPRYP---EIFIHHLKSGGRLVI 118 (165)
Q Consensus 86 ~-~~~fD~I~i~~~~~~~p---~~l~~~LkpgG~lvi 118 (165)
. .++||+|+++.....++ +.+.+.|||||++++
T Consensus 138 ~~~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 138 VNDKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp HTTSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEE
T ss_pred hccCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEE
Confidence 1 47899999998877665 567899999999988
No 18
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.68 E-value=1.3e-16 Score=124.86 Aligned_cols=110 Identities=11% Similarity=0.054 Sum_probs=89.2
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRA 82 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~ 82 (165)
++...++++..+....++.+|||| ||+|+.+..+++. .++|+++|+++++++.|+ +++.+.. ||+++.+|+.+
T Consensus 47 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 47 VAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ 126 (248)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 446677777777545678999999 9999999999997 469999999999999996 6666775 79999999865
Q ss_pred CCC---CCCCccEEEEcCCCCCch---HHHHhccccCcEEEEE
Q psy8015 83 SFG---DNGPYDAIHVGAAYPRYP---EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 83 ~~~---~~~~fD~I~i~~~~~~~p---~~l~~~LkpgG~lvi~ 119 (165)
.++ ..++||+|++++..+..+ +.+.+.|||||++++.
T Consensus 127 ~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 127 SLESLGECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp HHHTCCSCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred HHHhcCCCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence 322 235899999998766554 4678999999999875
No 19
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.67 E-value=4.2e-17 Score=124.79 Aligned_cols=110 Identities=14% Similarity=0.049 Sum_probs=88.9
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRA 82 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~ 82 (165)
++...++++..+....++.+|||| ||+|+.+..+++. .++|+++|+++++++.|+ ++..+..+ ++++.+|+.+
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 42 VSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALD 121 (223)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 356677777777555678999999 9999999999998 469999999999999996 66677765 9999999865
Q ss_pred CCCC-----CCCccEEEEcCCCCCch---HHHHhccccCcEEEEE
Q psy8015 83 SFGD-----NGPYDAIHVGAAYPRYP---EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 83 ~~~~-----~~~fD~I~i~~~~~~~p---~~l~~~LkpgG~lvi~ 119 (165)
.++. .++||+||+++..+..+ +.+.+.|||||++++.
T Consensus 122 ~~~~~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 122 SLQQIENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp HHHHHHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred HHHHHHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEe
Confidence 3322 15799999998766554 4678999999988874
No 20
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.67 E-value=3.5e-16 Score=121.61 Aligned_cols=111 Identities=13% Similarity=0.072 Sum_probs=91.9
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCC-cEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIP-NSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRASF 84 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~-~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~~~ 84 (165)
-+....++++.+....++.+|||+ ||+|..+..+++..+ +|+++|+++.+++.|+ .+..++.+ ++++.+|+....
T Consensus 30 ~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 109 (257)
T 3f4k_A 30 SPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP 109 (257)
T ss_dssp CHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS
T ss_pred CHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 345667777777555788999999 999999999999875 9999999999999996 55667765 999999996543
Q ss_pred CCCCCccEEEEcCCCCCch-----HHHHhccccCcEEEEEe
Q psy8015 85 GDNGPYDAIHVGAAYPRYP-----EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 85 ~~~~~fD~I~i~~~~~~~p-----~~l~~~LkpgG~lvi~~ 120 (165)
.+.++||+|++....+++. ..+.+.|||||++++..
T Consensus 110 ~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 110 FQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp SCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 3457999999998887753 36789999999999976
No 21
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.67 E-value=6.7e-16 Score=122.15 Aligned_cols=105 Identities=11% Similarity=0.035 Sum_probs=84.6
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGP 89 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~ 89 (165)
|.....++.... ..+.+|||| ||+|..+..|++...+|+++|+|++|++.|+. ..|++++++|+.+...++++
T Consensus 26 p~~l~~~l~~~~--~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~----~~~v~~~~~~~e~~~~~~~s 99 (257)
T 4hg2_A 26 PRALFRWLGEVA--PARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALR----HPRVTYAVAPAEDTGLPPAS 99 (257)
T ss_dssp CHHHHHHHHHHS--SCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCC----CTTEEEEECCTTCCCCCSSC
T ss_pred HHHHHHHHHHhc--CCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhh----cCCceeehhhhhhhcccCCc
Confidence 344434444332 356899999 99999999999999999999999999998862 35899999999775445689
Q ss_pred ccEEEEcCCCCCch-----HHHHhccccCcEEEEEec
Q psy8015 90 YDAIHVGAAYPRYP-----EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 90 fD~I~i~~~~~~~p-----~~l~~~LkpgG~lvi~~~ 121 (165)
||+|++..+.+.++ .++.+.|||||+|++...
T Consensus 100 fD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 100 VDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp EEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEEC
Confidence 99999999888654 367899999999988654
No 22
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.66 E-value=3.6e-16 Score=126.13 Aligned_cols=103 Identities=8% Similarity=-0.036 Sum_probs=82.9
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHH-HHHhcc-CCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCCCc
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQS-TTLPTF-IPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNGPY 90 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t-~~la~~-~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~~f 90 (165)
+-.+++ .++++++|||| ||+|.+| ..+|+. ..+|+++|+|++|++.|| +++.|++|++++++|+.+ ++ .++|
T Consensus 113 ~E~~la-~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~-l~-d~~F 189 (298)
T 3fpf_A 113 NEAALG-RFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV-ID-GLEF 189 (298)
T ss_dssp HHHHHT-TCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG-GG-GCCC
T ss_pred HHHHHc-CCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh-CC-CCCc
Confidence 333443 56899999999 9998766 556664 569999999999999997 556677889999999976 34 5789
Q ss_pred cEEEEcCCCC---CchHHHHhccccCcEEEEEec
Q psy8015 91 DAIHVGAAYP---RYPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 91 D~I~i~~~~~---~~p~~l~~~LkpgG~lvi~~~ 121 (165)
|+|++.+..+ .+.+++.++|||||++++...
T Consensus 190 DvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 190 DVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp SEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 9999987765 345688999999999999764
No 23
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.66 E-value=4.1e-16 Score=121.18 Aligned_cols=110 Identities=15% Similarity=0.051 Sum_probs=90.1
Q ss_pred CchHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCC
Q psy8015 9 SVSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRAS 83 (165)
Q Consensus 9 ~~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~ 83 (165)
.-+.....+++.+. ..++.+|||| ||+|.++..+++.. .+|+++|+++++++.|+ .+..++. |++++.+|+.+.
T Consensus 20 ~~~~~~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~ 98 (256)
T 1nkv_A 20 FTEEKYATLGRVLR-MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY 98 (256)
T ss_dssp CCHHHHHHHHHHTC-CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC
T ss_pred CCHHHHHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC
Confidence 34556777777774 5789999999 99999999999875 59999999999999996 5556664 799999999764
Q ss_pred CCCCCCccEEEEcCCCCCch------HHHHhccccCcEEEEEe
Q psy8015 84 FGDNGPYDAIHVGAAYPRYP------EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 84 ~~~~~~fD~I~i~~~~~~~p------~~l~~~LkpgG~lvi~~ 120 (165)
.. .++||+|++....++++ .++.+.|||||++++..
T Consensus 99 ~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 99 VA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp CC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred Cc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 44 67899999987776553 46789999999999964
No 24
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.66 E-value=3.7e-16 Score=123.20 Aligned_cols=107 Identities=7% Similarity=-0.048 Sum_probs=82.1
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhccccc-C------------------CCCC
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSST-I------------------DPDH 72 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~-~------------------~~~n 72 (165)
...+++..+....++.+|||+ ||+|..+..||+.+.+|+++|+|+.|++.|+.+. . ...+
T Consensus 55 ~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (252)
T 2gb4_A 55 LLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGS 134 (252)
T ss_dssp HHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS
T ss_pred HHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCc
Confidence 344444443323578999999 9999999999998889999999999999996221 1 2358
Q ss_pred eEEEEccCCCCCCC-CCCccEEEEcCCCCCchH--------HHHhccccCcEEEEE
Q psy8015 73 DYDLIADGRASFGD-NGPYDAIHVGAAYPRYPE--------IFIHHLKSGGRLVIP 119 (165)
Q Consensus 73 V~~~~gD~~~~~~~-~~~fD~I~i~~~~~~~p~--------~l~~~LkpgG~lvi~ 119 (165)
++++++|+.+..+. .++||+|+..+....+++ ++.+.|||||++++.
T Consensus 135 i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 135 ISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp EEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred eEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 99999999764333 378999999888776642 478999999999643
No 25
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.66 E-value=1.1e-16 Score=125.62 Aligned_cols=110 Identities=14% Similarity=0.080 Sum_probs=88.4
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRA 82 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~ 82 (165)
++...++++..+....++++|||| ||+|+.+.++++. .++|+++|+++++++.|+ +++.|+. +++++.+|+.+
T Consensus 63 ~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 142 (247)
T 1sui_A 63 TSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALP 142 (247)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHH
Confidence 445666777766555678999999 9999999999987 469999999999999996 5666774 69999999865
Q ss_pred CCCC-------CCCccEEEEcCCCCCch---HHHHhccccCcEEEEE
Q psy8015 83 SFGD-------NGPYDAIHVGAAYPRYP---EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 83 ~~~~-------~~~fD~I~i~~~~~~~p---~~l~~~LkpgG~lvi~ 119 (165)
.++. .++||+||+++....++ +.+.+.|||||++++.
T Consensus 143 ~l~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 143 VLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp HHHHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred HHHHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence 3321 36899999998776554 4678999999999874
No 26
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.65 E-value=2.7e-17 Score=128.77 Aligned_cols=110 Identities=12% Similarity=0.126 Sum_probs=89.8
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRA 82 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~ 82 (165)
++...++++..+....++++|||| ||+|+.|..+|+.. ++|+++|+++++++.|+ ++..|+. +|+++.+|+.+
T Consensus 44 i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 123 (242)
T 3r3h_A 44 VAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALD 123 (242)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 556677777777655678999999 99999999999864 58999999999999996 6667775 79999999865
Q ss_pred CCCC------CCCccEEEEcCCCCCch---HHHHhccccCcEEEEE
Q psy8015 83 SFGD------NGPYDAIHVGAAYPRYP---EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 83 ~~~~------~~~fD~I~i~~~~~~~p---~~l~~~LkpgG~lvi~ 119 (165)
.++. .++||+||+++.....+ +.+.+.|||||++++.
T Consensus 124 ~l~~~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 124 TLHSLLNEGGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp HHHHHHHHHCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHhhccCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEE
Confidence 4332 37899999998766544 4678999999999984
No 27
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.65 E-value=1.2e-15 Score=115.40 Aligned_cols=107 Identities=12% Similarity=0.009 Sum_probs=90.7
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccE
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDA 92 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~ 92 (165)
..++++.+....++.+|||+ ||+|.++..+++...+|+++|+++++++.|+. .+..|++++.+|+.+. ...++||+
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~--~~~~~~~~~~~d~~~~-~~~~~~D~ 110 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR--HGLDNVEFRQQDLFDW-TPDRQWDA 110 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG--GCCTTEEEEECCTTSC-CCSSCEEE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh--cCCCCeEEEecccccC-CCCCceeE
Confidence 45677777656788999999 99999999999988899999999999999975 4567899999999765 45689999
Q ss_pred EEEcCCCCCchH--------HHHhccccCcEEEEEecCC
Q psy8015 93 IHVGAAYPRYPE--------IFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 93 I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~~~~ 123 (165)
|++....+++++ ++.+.|||||++++.....
T Consensus 111 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 111 VFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 999998887664 4679999999999986543
No 28
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.65 E-value=7e-16 Score=118.51 Aligned_cols=107 Identities=12% Similarity=0.027 Sum_probs=88.4
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCcc
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYD 91 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD 91 (165)
....+++.+....++.+|||| ||+|.++..+++...+|+++|+++++++.|+.+... +++++.+|+.+. .+.++||
T Consensus 29 ~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~--~v~~~~~d~~~~-~~~~~fD 105 (250)
T 2p7i_A 29 MHPFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD--GITYIHSRFEDA-QLPRRYD 105 (250)
T ss_dssp HHHHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS--CEEEEESCGGGC-CCSSCEE
T ss_pred HHHHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC--CeEEEEccHHHc-CcCCccc
Confidence 345677777655678999999 999999999999888999999999999999732211 899999998765 4467899
Q ss_pred EEEEcCCCCCch------HHHH-hccccCcEEEEEecC
Q psy8015 92 AIHVGAAYPRYP------EIFI-HHLKSGGRLVIPIGD 122 (165)
Q Consensus 92 ~I~i~~~~~~~p------~~l~-~~LkpgG~lvi~~~~ 122 (165)
+|++....++++ .++. +.|||||++++....
T Consensus 106 ~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 106 NIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp EEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 999999887765 3578 999999999998754
No 29
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.65 E-value=8.4e-16 Score=119.82 Aligned_cols=105 Identities=13% Similarity=0.014 Sum_probs=81.6
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc------CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF------IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS 83 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~------~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~ 83 (165)
+.....+.+++.. .++++|||| ||+|+.|..|++. .++|+++|++++|++.|+ .. .+||+++++|+.+.
T Consensus 67 p~~~~~l~~~l~~-~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~--~~-~~~v~~~~gD~~~~ 142 (236)
T 2bm8_A 67 PDTQAVYHDMLWE-LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA--SD-MENITLHQGDCSDL 142 (236)
T ss_dssp HHHHHHHHHHHHH-HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG--GG-CTTEEEEECCSSCS
T ss_pred HHHHHHHHHHHHh-cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh--cc-CCceEEEECcchhH
Confidence 5556666666643 467899999 9999999999987 479999999999999887 22 25899999999764
Q ss_pred --CC--CCCCccEEEEcCCCCCchH---HHHh-ccccCcEEEEE
Q psy8015 84 --FG--DNGPYDAIHVGAAYPRYPE---IFIH-HLKSGGRLVIP 119 (165)
Q Consensus 84 --~~--~~~~fD~I~i~~~~~~~p~---~l~~-~LkpgG~lvi~ 119 (165)
++ ...+||+|+++++..+++. ++.+ +|||||++++.
T Consensus 143 ~~l~~~~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 143 TTFEHLREMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp GGGGGGSSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEEC
T ss_pred HHHHhhccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEE
Confidence 22 2347999999887544443 4554 99999999993
No 30
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.64 E-value=7.9e-16 Score=117.93 Aligned_cols=107 Identities=7% Similarity=-0.041 Sum_probs=85.2
Q ss_pred CchHHHHHHHHHHhcCCCCCeEEEEccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccCCC---CCeEEEEccCCC
Q psy8015 9 SVSGAVAKYVTYLSGHSKRLDCLALTSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTIDP---DHDYDLIADGRA 82 (165)
Q Consensus 9 ~~~~~~~~~l~~l~~~~~~~~vLei~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~~~---~nV~~~~gD~~~ 82 (165)
.++...++++.... .+.++|||+ ||||.|.++|+. .++|+++|.|++.++.|+ +++.|. +||+++.||+.+
T Consensus 15 ~v~~~~~~~L~~~l--~~a~~VLEi-GtGySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~ 91 (202)
T 3cvo_A 15 TMPPAEAEALRMAY--EEAEVILEY-GSGGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGP 91 (202)
T ss_dssp CSCHHHHHHHHHHH--HHCSEEEEE-SCSHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSS
T ss_pred cCCHHHHHHHHHHh--hCCCEEEEE-CchHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchh
Confidence 36677888888753 578999999 558999999997 589999999999999997 777774 579999999754
Q ss_pred C--------------CC----------CCCCccEEEEcCCCC-CchHHHHhccccCcEEEE
Q psy8015 83 S--------------FG----------DNGPYDAIHVGAAYP-RYPEIFIHHLKSGGRLVI 118 (165)
Q Consensus 83 ~--------------~~----------~~~~fD~I~i~~~~~-~~p~~l~~~LkpgG~lvi 118 (165)
. ++ ..++||+||+++... ...+...++|+|||++++
T Consensus 92 ~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 92 TGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp BCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSHHHHHHHHHHHCSSCEEEEE
T ss_pred hhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCchhHHHHHHHhcCCCeEEEE
Confidence 3 21 237899999999754 222345699999999966
No 31
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.64 E-value=4.5e-16 Score=116.45 Aligned_cols=112 Identities=8% Similarity=-0.022 Sum_probs=86.4
Q ss_pred hHHHHHHHHHHhcC--CCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC
Q psy8015 11 SGAVAKYVTYLSGH--SKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF 84 (165)
Q Consensus 11 ~~~~~~~l~~l~~~--~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~ 84 (165)
+.....+++++... .++.+|||+ ||+|.++..++... .+|+++|+|+++++.|+ ++..+.+|++++++|+.+..
T Consensus 27 ~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 106 (189)
T 3p9n_A 27 DRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVV 106 (189)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHH
Confidence 44555666666432 578999999 99999999766654 58999999999999996 55566778999999986532
Q ss_pred C--CCCCccEEEEcCCCCCc-h------HHHHh--ccccCcEEEEEecC
Q psy8015 85 G--DNGPYDAIHVGAAYPRY-P------EIFIH--HLKSGGRLVIPIGD 122 (165)
Q Consensus 85 ~--~~~~fD~I~i~~~~~~~-p------~~l~~--~LkpgG~lvi~~~~ 122 (165)
+ +.++||+|+++...+.. + +.+.+ .|+|||++++....
T Consensus 107 ~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 107 AAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp HHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred hhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 1 24789999999877653 1 24566 89999999998754
No 32
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.64 E-value=8.5e-17 Score=123.12 Aligned_cols=110 Identities=11% Similarity=0.047 Sum_probs=88.2
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRA 82 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~ 82 (165)
++...+.++..+....++.+|||+ ||+|+.+..+++. ..+|+++|+++++++.|+ ++..+..+ ++++++|+.+
T Consensus 48 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 127 (225)
T 3tr6_A 48 TAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKD 127 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHH
Confidence 455667777777555678999999 9999999999987 569999999999999996 66667765 9999999855
Q ss_pred CCCC------CCCccEEEEcCCCCCch---HHHHhccccCcEEEEE
Q psy8015 83 SFGD------NGPYDAIHVGAAYPRYP---EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 83 ~~~~------~~~fD~I~i~~~~~~~p---~~l~~~LkpgG~lvi~ 119 (165)
.++. .++||+|+++......+ +.+.+.|||||++++.
T Consensus 128 ~~~~~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 128 TLAELIHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp HHHHHHTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHhhhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 3321 16899999988765444 5678999999999884
No 33
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.64 E-value=1.5e-15 Score=120.32 Aligned_cols=94 Identities=12% Similarity=-0.008 Sum_probs=78.4
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC----CcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCCCCCCCccEEEEc
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI----PNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASFGDNGPYDAIHVG 96 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~----~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~~~~~~fD~I~i~ 96 (165)
+|+.+|||+ ||+|..+..|++.. .+|+++|+|++|++.|| ++..+. .||+++++|+.+. + .++||+|++.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~-~-~~~~d~v~~~ 146 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI-A-IENASMVVLN 146 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC-C-CCSEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc-c-ccccccceee
Confidence 689999999 99999999999865 27999999999999996 455554 4799999998753 3 3579999999
Q ss_pred CCCCCchH--------HHHhccccCcEEEEEe
Q psy8015 97 AAYPRYPE--------IFIHHLKSGGRLVIPI 120 (165)
Q Consensus 97 ~~~~~~p~--------~l~~~LkpgG~lvi~~ 120 (165)
...+++++ ++.+.|||||++++..
T Consensus 147 ~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 147 FTLQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 88877652 5789999999999864
No 34
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.63 E-value=2.5e-16 Score=120.86 Aligned_cols=111 Identities=10% Similarity=0.022 Sum_probs=85.8
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRA 82 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~ 82 (165)
++...++++..+....++++|||+ ||+|+.+..+++. ..+|+++|+++++++.|+ ++..++. +++++.+|+.+
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (221)
T 3u81_A 42 VGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQD 121 (221)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHH
Confidence 344556666666554678999999 9999999999985 358999999999999996 5566765 59999999854
Q ss_pred CCCC------CCCccEEEEcCCCCCchH--HHH---hccccCcEEEEEe
Q psy8015 83 SFGD------NGPYDAIHVGAAYPRYPE--IFI---HHLKSGGRLVIPI 120 (165)
Q Consensus 83 ~~~~------~~~fD~I~i~~~~~~~p~--~l~---~~LkpgG~lvi~~ 120 (165)
.++. .++||+||++...+++++ .+. +.|||||++++.-
T Consensus 122 ~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~~LkpgG~lv~~~ 170 (221)
T 3u81_A 122 LIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLADN 170 (221)
T ss_dssp HGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHTTCCCTTCEEEESC
T ss_pred HHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhccccCCCeEEEEeC
Confidence 3221 158999999988776653 111 7999999998843
No 35
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.63 E-value=1.4e-15 Score=119.37 Aligned_cols=112 Identities=11% Similarity=0.036 Sum_probs=90.7
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCC-cEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIP-NSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASF 84 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~-~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~ 84 (165)
......++++.+....++.+|||| ||+|.++..+++... +|+++|+++.+++.|+ .+..+++ +++++.+|..+..
T Consensus 30 ~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 109 (267)
T 3kkz_A 30 SPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP 109 (267)
T ss_dssp CHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred CHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC
Confidence 345566777777545789999999 999999999998864 9999999999999996 5566764 5999999997643
Q ss_pred CCCCCccEEEEcCCCCCch-----HHHHhccccCcEEEEEec
Q psy8015 85 GDNGPYDAIHVGAAYPRYP-----EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 85 ~~~~~fD~I~i~~~~~~~p-----~~l~~~LkpgG~lvi~~~ 121 (165)
.+.++||+|++....+++. ..+.+.|||||++++...
T Consensus 110 ~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 110 FRNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp CCTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CCCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 3457899999998876552 367899999999999753
No 36
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.63 E-value=1.3e-15 Score=115.75 Aligned_cols=105 Identities=15% Similarity=0.055 Sum_probs=84.5
Q ss_pred HHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEE
Q psy8015 15 AKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAI 93 (165)
Q Consensus 15 ~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I 93 (165)
..++..+....++.+|||+ ||+|.++..+++...+|+++|+++++++.|+.+.....|++++.+|+.+.. ..++||+|
T Consensus 40 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v 118 (216)
T 3ofk_A 40 TQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLI 118 (216)
T ss_dssp HHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEE
T ss_pred HHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEE
Confidence 3444444344678999999 999999999999888999999999999999732223448999999997654 46899999
Q ss_pred EEcCCCCCchH---------HHHhccccCcEEEEEe
Q psy8015 94 HVGAAYPRYPE---------IFIHHLKSGGRLVIPI 120 (165)
Q Consensus 94 ~i~~~~~~~p~---------~l~~~LkpgG~lvi~~ 120 (165)
++....+++++ .+.+.|||||++++..
T Consensus 119 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 119 VVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp EEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 99988876652 4679999999999864
No 37
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.62 E-value=3.5e-15 Score=113.63 Aligned_cols=108 Identities=11% Similarity=-0.012 Sum_probs=84.8
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCC-----CeEEEEccCCC
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPD-----HDYDLIADGRA 82 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~-----nV~~~~gD~~~ 82 (165)
....+++.+.. .++.+|||+ ||+|.++..+++.. .+|+++|+|+++++.|+ ++..++. +++++.+|+..
T Consensus 17 ~~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 95 (219)
T 3jwg_A 17 RLGTVVAVLKS-VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVY 95 (219)
T ss_dssp HHHHHHHHHHH-TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSS
T ss_pred HHHHHHHHHhh-cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccc
Confidence 34556666654 678999999 99999999999876 59999999999999996 4433443 89999999855
Q ss_pred CCCCCCCccEEEEcCCCCCchH--------HHHhccccCcEEEEEec
Q psy8015 83 SFGDNGPYDAIHVGAAYPRYPE--------IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 83 ~~~~~~~fD~I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~~ 121 (165)
.....++||+|++....+++++ .+.+.|||||.++....
T Consensus 96 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 96 RDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp CCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 4333578999999988887763 36799999997666543
No 38
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.62 E-value=1.8e-15 Score=118.38 Aligned_cols=97 Identities=14% Similarity=0.170 Sum_probs=78.5
Q ss_pred CCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCC---CCCCCccEEEEc
Q psy8015 24 HSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASF---GDNGPYDAIHVG 96 (165)
Q Consensus 24 ~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~---~~~~~fD~I~i~ 96 (165)
++||++|||+ ||+|+++..+|+.+ ++|+|+|++++|++.++.+.....|+..+.+|+.... ...+.+|+||++
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d 154 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD 154 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe
Confidence 4899999999 99999999999975 6899999999999998633334569999999986421 224689999998
Q ss_pred CCCCCch----HHHHhccccCcEEEEEe
Q psy8015 97 AAYPRYP----EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 97 ~~~~~~p----~~l~~~LkpgG~lvi~~ 120 (165)
...+..+ .++.+.|||||++++.+
T Consensus 155 ~~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 155 VAQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp CCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 7766543 35678999999999975
No 39
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.62 E-value=3.5e-15 Score=110.40 Aligned_cols=110 Identities=14% Similarity=0.000 Sum_probs=90.9
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCC--eEEEEccCCCCCCC
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDH--DYDLIADGRASFGD 86 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~n--V~~~~gD~~~~~~~ 86 (165)
.....+++.+. ..++.+|||+ ||+|.++..+++...+|+++|+++++++.|+ .+..+.+| ++++.+|..+..+
T Consensus 39 ~~~~~l~~~~~-~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~- 116 (194)
T 1dus_A 39 KGTKILVENVV-VDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK- 116 (194)
T ss_dssp HHHHHHHHHCC-CCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT-
T ss_pred hHHHHHHHHcc-cCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc-
Confidence 56777888874 4689999999 9999999999988789999999999999996 55567777 9999999877544
Q ss_pred CCCccEEEEcCCCCCc-------hHHHHhccccCcEEEEEecCC
Q psy8015 87 NGPYDAIHVGAAYPRY-------PEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 87 ~~~fD~I~i~~~~~~~-------p~~l~~~LkpgG~lvi~~~~~ 123 (165)
.++||+|+++...+.. .+.+.+.|+|||++++.....
T Consensus 117 ~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 117 DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 5689999998776542 235678999999999987653
No 40
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.62 E-value=4.9e-15 Score=112.78 Aligned_cols=107 Identities=11% Similarity=-0.049 Sum_probs=85.0
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCC-----CeEEEEccCCCC
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPD-----HDYDLIADGRAS 83 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~-----nV~~~~gD~~~~ 83 (165)
...+++.+.. .++.+|||+ ||+|.++..+++.. .+|+++|+++++++.|+ ++..++. |++++.+|+...
T Consensus 18 ~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (217)
T 3jwh_A 18 MNGVVAALKQ-SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ 96 (217)
T ss_dssp HHHHHHHHHH-TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC
T ss_pred HHHHHHHHHh-cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc
Confidence 4556666654 678999999 99999999999876 58999999999999996 4445554 799999998643
Q ss_pred CCCCCCccEEEEcCCCCCchH--------HHHhccccCcEEEEEec
Q psy8015 84 FGDNGPYDAIHVGAAYPRYPE--------IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 84 ~~~~~~fD~I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~~ 121 (165)
....++||+|++....+++++ .+.+.|||||++++...
T Consensus 97 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 97 DKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp CGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 333478999999988876653 46789999997776543
No 41
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.61 E-value=1.8e-15 Score=121.64 Aligned_cols=108 Identities=12% Similarity=-0.027 Sum_probs=86.9
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCCCCC
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFGDNG 88 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~~~~ 88 (165)
..++++.+....++.+|||+ ||+|.++..+++. ..+|+++|+++++++.|+ .+..++. |++++.+|+.+...+.+
T Consensus 105 ~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 184 (312)
T 3vc1_A 105 AEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKG 184 (312)
T ss_dssp HHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred HHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCC
Confidence 34455665434789999999 9999999999987 679999999999999996 5556765 79999999976433457
Q ss_pred CccEEEEcCCCCCch-----HHHHhccccCcEEEEEec
Q psy8015 89 PYDAIHVGAAYPRYP-----EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 89 ~fD~I~i~~~~~~~p-----~~l~~~LkpgG~lvi~~~ 121 (165)
+||+|++....++++ +++.+.|||||++++...
T Consensus 185 ~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 185 AVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 999999987766543 367899999999998653
No 42
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.61 E-value=3e-16 Score=122.19 Aligned_cols=110 Identities=14% Similarity=0.073 Sum_probs=88.5
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRA 82 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~ 82 (165)
++...++++..+....++++|||| ||+|+.+.++++. .++|+++|+++++++.|+ +++.|.. +++++.+|+.+
T Consensus 54 ~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 133 (237)
T 3c3y_A 54 TSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAML 133 (237)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 445667777776555678999999 9999999999987 469999999999999996 5667775 59999999865
Q ss_pred CCC-------CCCCccEEEEcCCCCCch---HHHHhccccCcEEEEE
Q psy8015 83 SFG-------DNGPYDAIHVGAAYPRYP---EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 83 ~~~-------~~~~fD~I~i~~~~~~~p---~~l~~~LkpgG~lvi~ 119 (165)
.++ +.++||+||+++....++ +.+.+.|+|||++++.
T Consensus 134 ~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 134 ALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp HHHHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence 322 136899999998766544 4678999999999884
No 43
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.61 E-value=1.5e-15 Score=118.76 Aligned_cols=111 Identities=17% Similarity=0.158 Sum_probs=84.7
Q ss_pred CchHHHHHHHHHHhc--CCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccC
Q psy8015 9 SVSGAVAKYVTYLSG--HSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADG 80 (165)
Q Consensus 9 ~~~~~~~~~l~~l~~--~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~ 80 (165)
.++...++++..|.. ++|+++|||+ ||+|+.|..+|+.+ ++|+|+|+++.|++... .++ ..|++++.+|+
T Consensus 57 ~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~--r~nv~~i~~Da 134 (232)
T 3id6_C 57 FRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR--RPNIFPLLADA 134 (232)
T ss_dssp TTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH--CTTEEEEECCT
T ss_pred HHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh--cCCeEEEEccc
Confidence 467777888887742 4789999999 99999999999875 49999999998865432 121 26899999998
Q ss_pred CCCCC---CCCCccEEEEcCCCCCchH----HHHhccccCcEEEEEec
Q psy8015 81 RASFG---DNGPYDAIHVGAAYPRYPE----IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 81 ~~~~~---~~~~fD~I~i~~~~~~~p~----~l~~~LkpgG~lvi~~~ 121 (165)
..... ..++||+|+++.+.+..++ .+.+.|||||++++.+.
T Consensus 135 ~~~~~~~~~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 135 RFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp TCGGGTTTTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccchhhhccccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 75321 1368999999988765443 23458999999999863
No 44
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.61 E-value=2.3e-15 Score=117.07 Aligned_cols=109 Identities=12% Similarity=0.004 Sum_probs=87.1
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCC
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGP 89 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~ 89 (165)
.....+++.+. ..++.+|||+ ||+|.++..+++. ..+|+++|+|+++++.|+.+.....+++++.+|+.+...+.++
T Consensus 42 ~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~ 120 (266)
T 3ujc_A 42 EATKKILSDIE-LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENN 120 (266)
T ss_dssp HHHHHHTTTCC-CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTC
T ss_pred HHHHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCc
Confidence 34455666553 4688999999 9999999999986 6799999999999999972221227899999999764334679
Q ss_pred ccEEEEcCCCCCc--h------HHHHhccccCcEEEEEec
Q psy8015 90 YDAIHVGAAYPRY--P------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 90 fD~I~i~~~~~~~--p------~~l~~~LkpgG~lvi~~~ 121 (165)
||+|++....+++ + .++.+.|||||++++...
T Consensus 121 fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 121 FDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9999999988887 3 357899999999999753
No 45
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.61 E-value=1.2e-15 Score=116.00 Aligned_cols=106 Identities=12% Similarity=0.039 Sum_probs=88.3
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCC
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDN 87 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~ 87 (165)
..++++.+. ..++.+|||+ ||+|.++..+++.. .+|+++|+++++++.|+ ++..+.+|++++.+|+.+...+.
T Consensus 26 ~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 26 PEKVLKEFG-LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHHHT-CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCS
T ss_pred HHHHHHHhC-CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCC
Confidence 356777774 4789999999 99999999999876 69999999999999996 55567779999999987643345
Q ss_pred CCccEEEEcCCCCCch------HHHHhccccCcEEEEEe
Q psy8015 88 GPYDAIHVGAAYPRYP------EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 88 ~~fD~I~i~~~~~~~p------~~l~~~LkpgG~lvi~~ 120 (165)
++||+|++....++++ +++.+.|||||++++..
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 7899999998877654 36789999999999975
No 46
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.61 E-value=4.1e-15 Score=114.19 Aligned_cols=108 Identities=13% Similarity=-0.061 Sum_probs=85.1
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCC
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNG 88 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~ 88 (165)
.....+++++....++.+|||+ ||+|.++..+++. ..+|+++|+++++++.|+.+.....+++++.+|..+...+ +
T Consensus 30 ~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~ 108 (234)
T 3dtn_A 30 DFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-E 108 (234)
T ss_dssp HHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-S
T ss_pred HHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-C
Confidence 3345555555434678999999 9999999999998 4699999999999999972222223899999998764443 7
Q ss_pred CccEEEEcCCCCCchH--------HHHhccccCcEEEEEe
Q psy8015 89 PYDAIHVGAAYPRYPE--------IFIHHLKSGGRLVIPI 120 (165)
Q Consensus 89 ~fD~I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~ 120 (165)
+||+|++....+++++ ++.+.|||||++++..
T Consensus 109 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 109 KYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999999988876653 4678999999999865
No 47
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.60 E-value=2.5e-16 Score=122.17 Aligned_cols=107 Identities=13% Similarity=0.122 Sum_probs=84.6
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCCCCCC
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRASFGD 86 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~~~~~ 86 (165)
.+.++..+....++++|||| ||+|+.+..+++. ..+|+++|+++++++.|+ ++..+..+ ++++.+|+.+.++.
T Consensus 48 ~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~ 127 (239)
T 2hnk_A 48 EGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQV 127 (239)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHH
Confidence 33444444334678999999 9999999999987 469999999999999996 55667765 99999997543221
Q ss_pred ----------------C-CCccEEEEcCCCCCch---HHHHhccccCcEEEEEe
Q psy8015 87 ----------------N-GPYDAIHVGAAYPRYP---EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 87 ----------------~-~~fD~I~i~~~~~~~p---~~l~~~LkpgG~lvi~~ 120 (165)
. ++||+|+++...+.++ +.+.+.|+|||++++..
T Consensus 128 ~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 128 LIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 2 6899999998776665 67889999999999864
No 48
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.60 E-value=3.3e-15 Score=114.57 Aligned_cols=96 Identities=15% Similarity=0.113 Sum_probs=78.1
Q ss_pred CCCCCeEEEE-cc-ccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCC--CCCCCCCccEEEEc
Q psy8015 24 HSKRLDCLAL-TS-NTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRA--SFGDNGPYDAIHVG 96 (165)
Q Consensus 24 ~~~~~~vLei-~G-sG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~--~~~~~~~fD~I~i~ 96 (165)
..++.+|||+ || +|.++..+++. ..+|+++|+++++++.|+ ++..+. |++++++|+.. .++ .++||+|+++
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~-~~~fD~I~~n 130 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGVV-EGTFDVIFSA 130 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTTC-CSCEEEEEEC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhcc-cCceeEEEEC
Confidence 3689999999 99 99999999998 789999999999999996 555666 89999999642 333 3789999998
Q ss_pred CCCCC-------------------------chHHHHhccccCcEEEEEec
Q psy8015 97 AAYPR-------------------------YPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 97 ~~~~~-------------------------~p~~l~~~LkpgG~lvi~~~ 121 (165)
..... +.+.+.+.|||||++++.+.
T Consensus 131 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 131 PPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLP 180 (230)
T ss_dssp CCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 55421 22456789999999999664
No 49
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.60 E-value=1.8e-15 Score=116.03 Aligned_cols=95 Identities=16% Similarity=0.061 Sum_probs=74.3
Q ss_pred CCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCC---CCCCCCccEEEE
Q psy8015 24 HSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRAS---FGDNGPYDAIHV 95 (165)
Q Consensus 24 ~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~---~~~~~~fD~I~i 95 (165)
..++++|||+ ||+|+.+..+++.+ ++|+++|+|++|++.+. .++ ..|+.++.+|+... .+..++||+|++
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~--~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 132 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE--RNNIIPLLFDASKPWKYSGIVEKVDLIYQ 132 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH--CSSEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc--CCCeEEEEcCCCCchhhcccccceeEEEE
Confidence 3689999999 99999999999876 78999999999876442 222 35899999998653 222378999999
Q ss_pred cCCCCCc----hHHHHhccccCcEEEEEe
Q psy8015 96 GAAYPRY----PEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 96 ~~~~~~~----p~~l~~~LkpgG~lvi~~ 120 (165)
+...+.. ..++.+.|||||++++.+
T Consensus 133 ~~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 133 DIAQKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eccChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 8654432 246789999999999986
No 50
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.60 E-value=8.3e-16 Score=116.79 Aligned_cols=109 Identities=9% Similarity=-0.098 Sum_probs=84.9
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRA 82 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~ 82 (165)
++...+.++..+....++.+|||+ ||+|+.+..+++.. ++|+++|+++++++.|+ ++..+.. +++++.+|+.+
T Consensus 40 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 119 (210)
T 3c3p_A 40 VDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLG 119 (210)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHH
Confidence 444556666665444577899999 99999999999874 59999999999999996 4555654 59999999865
Q ss_pred CCCC-CCCccEEEEcCCCCCch---HHHHhccccCcEEEEE
Q psy8015 83 SFGD-NGPYDAIHVGAAYPRYP---EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 83 ~~~~-~~~fD~I~i~~~~~~~p---~~l~~~LkpgG~lvi~ 119 (165)
.++. .+ ||+|+++......+ +.+.+.|||||++++.
T Consensus 120 ~~~~~~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 120 IAAGQRD-IDILFMDCDVFNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp HHTTCCS-EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred HhccCCC-CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEE
Confidence 3222 35 99999997766554 4678999999999873
No 51
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.60 E-value=4.4e-15 Score=115.63 Aligned_cols=110 Identities=15% Similarity=0.002 Sum_probs=90.4
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRAS 83 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~~ 83 (165)
+...+.++..+. ..++.+|||+ ||+|.++..+++. ..+|+++|+++++++.|+ ++..+.+| ++++.+|+.+.
T Consensus 79 ~~~~~~i~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 157 (255)
T 3mb5_A 79 PKDAALIVAYAG-ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG 157 (255)
T ss_dssp HHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC
T ss_pred HhHHHHHHHhhC-CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc
Confidence 345556667664 5789999999 9999999999988 579999999999999996 55667776 99999999876
Q ss_pred CCCCCCccEEEEcCCCC-CchHHHHhccccCcEEEEEecC
Q psy8015 84 FGDNGPYDAIHVGAAYP-RYPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 84 ~~~~~~fD~I~i~~~~~-~~p~~l~~~LkpgG~lvi~~~~ 122 (165)
++ .++||+|+++...+ ...+.+.+.|+|||++++....
T Consensus 158 ~~-~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 158 IE-EENVDHVILDLPQPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp CC-CCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred cC-CCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEECC
Confidence 54 46799999976554 3567889999999999998753
No 52
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.59 E-value=1.3e-15 Score=115.71 Aligned_cols=113 Identities=8% Similarity=0.083 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccCCC--CCeEEEEccCCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTIDP--DHDYDLIADGRASF 84 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~~~--~nV~~~~gD~~~~~ 84 (165)
+.....+++++....++.+|||+ ||+|.++..++.. ..+|+++|+|++|++.|+ ++..++ +|++++.+|+.+..
T Consensus 38 ~~~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~ 117 (201)
T 2ift_A 38 DRVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFL 117 (201)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHT
T ss_pred HHHHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHH
Confidence 34455666666432268999999 9999999975554 468999999999999996 556677 68999999986543
Q ss_pred CC--CCC-ccEEEEcCCCCC--ch---HHH--HhccccCcEEEEEecCC
Q psy8015 85 GD--NGP-YDAIHVGAAYPR--YP---EIF--IHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 85 ~~--~~~-fD~I~i~~~~~~--~p---~~l--~~~LkpgG~lvi~~~~~ 123 (165)
+. .++ ||+|+++..+.. .+ +.+ .+.|+|||++++.....
T Consensus 118 ~~~~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 118 KQPQNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp TSCCSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred HhhccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 32 468 999999877431 12 234 34699999999987654
No 53
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.59 E-value=7.6e-15 Score=117.29 Aligned_cols=103 Identities=12% Similarity=0.054 Sum_probs=84.6
Q ss_pred HHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCCCCCC
Q psy8015 15 AKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFGDNGP 89 (165)
Q Consensus 15 ~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~~~~~ 89 (165)
..+++.+. ..++.+|||| ||+|.++..+++. ..+|+++|+|+++++.|+ .+..++. +++++.+|..+. .++
T Consensus 62 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~ 137 (302)
T 3hem_A 62 KLALDKLN-LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEP 137 (302)
T ss_dssp HHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCC
T ss_pred HHHHHHcC-CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCC
Confidence 34455442 3789999999 9999999999987 679999999999999996 5556765 799999998654 578
Q ss_pred ccEEEEcCCCCCch---------------HHHHhccccCcEEEEEec
Q psy8015 90 YDAIHVGAAYPRYP---------------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 90 fD~I~i~~~~~~~p---------------~~l~~~LkpgG~lvi~~~ 121 (165)
||+|++....+++| +++.+.|||||++++...
T Consensus 138 fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 138 VDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp CSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred ccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 99999998877662 357899999999999654
No 54
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.59 E-value=6.2e-15 Score=108.93 Aligned_cols=111 Identities=13% Similarity=0.061 Sum_probs=89.9
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASFG 85 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~~ 85 (165)
.......+++.+. ..++.+|||+ ||+|.++..+++...+|+++|+++++++.|+ ++..+. ++++++.+|..+.++
T Consensus 18 ~~~~~~~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 96 (192)
T 1l3i_A 18 AMEVRCLIMCLAE-PGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALC 96 (192)
T ss_dssp CHHHHHHHHHHHC-CCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHT
T ss_pred hHHHHHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcc
Confidence 3455566666664 5789999999 9999999999988899999999999999996 555666 689999999866444
Q ss_pred CCCCccEEEEcCCCCCch---HHHHhccccCcEEEEEec
Q psy8015 86 DNGPYDAIHVGAAYPRYP---EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 86 ~~~~fD~I~i~~~~~~~p---~~l~~~LkpgG~lvi~~~ 121 (165)
..++||+|+++...+++. +.+.+.|+|||++++...
T Consensus 97 ~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 97 KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 435899999988766544 467899999999999754
No 55
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.59 E-value=1.1e-14 Score=112.02 Aligned_cols=105 Identities=7% Similarity=-0.029 Sum_probs=85.7
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCC-C-C
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFG-D-N 87 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~-~-~ 87 (165)
......++..+. .++.+|||+ ||+|+++..+++...+|+++|+++.+++.|+.+ ..|++++++|+.+.++ + .
T Consensus 35 ~~l~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~~~~~~~~~d~~~~~~~~~~ 109 (226)
T 3m33_A 35 ELTFDLWLSRLL--TPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN---APHADVYEWNGKGELPAGLG 109 (226)
T ss_dssp THHHHHHHHHHC--CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH---CTTSEEEECCSCSSCCTTCC
T ss_pred HHHHHHHHHhcC--CCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh---CCCceEEEcchhhccCCcCC
Confidence 345555555542 678999999 999999999999888999999999999999744 4589999999965443 2 4
Q ss_pred CCccEEEEcCCCCCchHHHHhccccCcEEEEEe
Q psy8015 88 GPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 88 ~~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~~ 120 (165)
++||+|++......+..++.+.|||||+++...
T Consensus 110 ~~fD~v~~~~~~~~~l~~~~~~LkpgG~l~~~~ 142 (226)
T 3m33_A 110 APFGLIVSRRGPTSVILRLPELAAPDAHFLYVG 142 (226)
T ss_dssp CCEEEEEEESCCSGGGGGHHHHEEEEEEEEEEE
T ss_pred CCEEEEEeCCCHHHHHHHHHHHcCCCcEEEEeC
Confidence 789999998666677788999999999999443
No 56
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.59 E-value=3.1e-15 Score=117.66 Aligned_cols=97 Identities=14% Similarity=0.038 Sum_probs=83.0
Q ss_pred CCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAY 99 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~ 99 (165)
.++.+|||| ||+|.++..+++. ..+|+++|+++.+++.|+ ++..+.+|++++.+|+.+...+.++||+|++....
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 688999999 9999999999988 468999999999999996 55667789999999997644456799999999887
Q ss_pred CCch------HHHHhccccCcEEEEEec
Q psy8015 100 PRYP------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 100 ~~~p------~~l~~~LkpgG~lvi~~~ 121 (165)
++++ ..+.+.|||||++++...
T Consensus 116 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 116 EHLQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 7654 357899999999999764
No 57
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.59 E-value=9.1e-15 Score=114.66 Aligned_cols=106 Identities=14% Similarity=0.081 Sum_probs=85.6
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCCCCC
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFGDNG 88 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~~~~ 88 (165)
...+++.+. ..++.+|||| ||+|.++..+++. ..+|+++|+|+++++.|+ .+..++. +++++.+|+.+...+.+
T Consensus 50 ~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 128 (273)
T 3bus_A 50 TDEMIALLD-VRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDA 128 (273)
T ss_dssp HHHHHHHSC-CCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTT
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCC
Confidence 445555553 3689999999 9999999999875 569999999999999996 4555654 69999999876433457
Q ss_pred CccEEEEcCCCCCch------HHHHhccccCcEEEEEe
Q psy8015 89 PYDAIHVGAAYPRYP------EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 89 ~fD~I~i~~~~~~~p------~~l~~~LkpgG~lvi~~ 120 (165)
+||+|++....++++ .++.+.|||||++++..
T Consensus 129 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 129 SFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp CEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 899999999888775 35789999999999865
No 58
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.59 E-value=5.7e-15 Score=120.11 Aligned_cols=112 Identities=14% Similarity=0.115 Sum_probs=87.8
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCC-----------CCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTID-----------PDH 72 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~-----------~~n 72 (165)
.+...+.+++.+. ..++.+|||+ ||+|+++..+++.. ++|+++|+++++++.|+ ++.++ .+|
T Consensus 90 ~~~~~~~~l~~l~-~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~ 168 (336)
T 2b25_A 90 FPKDINMILSMMD-INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN 168 (336)
T ss_dssp CHHHHHHHHHHHT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCC
T ss_pred CHHHHHHHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCc
Confidence 3455777888884 5899999999 99999999999874 78999999999999996 33221 358
Q ss_pred eEEEEccCCCCCC--CCCCccEEEEcCCCC-CchHHHHhccccCcEEEEEecC
Q psy8015 73 DYDLIADGRASFG--DNGPYDAIHVGAAYP-RYPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 73 V~~~~gD~~~~~~--~~~~fD~I~i~~~~~-~~p~~l~~~LkpgG~lvi~~~~ 122 (165)
++++.+|+.+... +.++||+|+++...+ ...+.+.+.|||||++++....
T Consensus 169 v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 169 VDFIHKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp EEEEESCTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEESS
T ss_pred eEEEECChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9999999976532 245799999986655 4567899999999999998764
No 59
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.59 E-value=8.9e-15 Score=111.16 Aligned_cols=103 Identities=11% Similarity=-0.006 Sum_probs=85.8
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccE
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDA 92 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~ 92 (165)
...+++.+.. .++.+|||+ ||+|.++..+++...+|+++|+++++++.|+.+. . .+++++.+|+.+...+ ++||+
T Consensus 34 ~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~-~~~~~~~~d~~~~~~~-~~fD~ 109 (220)
T 3hnr_A 34 YEDILEDVVN-KSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKL-P-KEFSITEGDFLSFEVP-TSIDT 109 (220)
T ss_dssp HHHHHHHHHH-TCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHS-C-TTCCEESCCSSSCCCC-SCCSE
T ss_pred HHHHHHHhhc-cCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhC-C-CceEEEeCChhhcCCC-CCeEE
Confidence 4567777754 688999999 9999999999998889999999999999997322 1 5899999999774433 89999
Q ss_pred EEEcCCCCCchH--------HHHhccccCcEEEEEe
Q psy8015 93 IHVGAAYPRYPE--------IFIHHLKSGGRLVIPI 120 (165)
Q Consensus 93 I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~ 120 (165)
|++....+++++ ++.+.|||||++++..
T Consensus 110 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 110 IVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 999988876653 5678999999999975
No 60
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.59 E-value=1e-14 Score=113.41 Aligned_cols=111 Identities=14% Similarity=0.007 Sum_probs=87.6
Q ss_pred hHHHHHHHHHH----hcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccc-cCCCCCeEEEEccCCCCC
Q psy8015 11 SGAVAKYVTYL----SGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSS-TIDPDHDYDLIADGRASF 84 (165)
Q Consensus 11 ~~~~~~~l~~l----~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~-~~~~~nV~~~~gD~~~~~ 84 (165)
+.....+++.+ ....++.+|||+ ||+|.++..+++...+|+++|+|++|++.|+.+ ..+..|++++.+|+.+..
T Consensus 20 ~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 99 (263)
T 2yqz_A 20 PEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP 99 (263)
T ss_dssp HHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC
T ss_pred hHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC
Confidence 34455666665 123678999999 999999999999888999999999999999722 234568999999986643
Q ss_pred CCCCCccEEEEcCCCCCch------HHHHhccccCcEEEEEec
Q psy8015 85 GDNGPYDAIHVGAAYPRYP------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 85 ~~~~~fD~I~i~~~~~~~p------~~l~~~LkpgG~lvi~~~ 121 (165)
.+.++||+|++....++++ .++.+.|||||++++..+
T Consensus 100 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (263)
T 2yqz_A 100 LPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEGWD 142 (263)
T ss_dssp SCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEEec
Confidence 3457899999998877664 357899999999998743
No 61
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.58 E-value=6.9e-15 Score=116.93 Aligned_cols=110 Identities=14% Similarity=-0.013 Sum_probs=88.4
Q ss_pred HHHHHHHHHH---hcCCCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCC
Q psy8015 12 GAVAKYVTYL---SGHSKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRAS 83 (165)
Q Consensus 12 ~~~~~~l~~l---~~~~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~ 83 (165)
.....+++.+ ....++.+|||+ ||+|.++..+++. ..+|+++|+++.+++.|+ .+..+. ++++++.+|..+.
T Consensus 65 ~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 144 (297)
T 2o57_A 65 RTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI 144 (297)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC
Confidence 3456677777 245789999999 9999999999986 459999999999999996 444565 4799999998764
Q ss_pred CCCCCCccEEEEcCCCCCch------HHHHhccccCcEEEEEec
Q psy8015 84 FGDNGPYDAIHVGAAYPRYP------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 84 ~~~~~~fD~I~i~~~~~~~p------~~l~~~LkpgG~lvi~~~ 121 (165)
..+.++||+|++....++++ .++.+.|||||++++...
T Consensus 145 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 145 PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 33457899999998877654 367899999999999753
No 62
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.58 E-value=4.3e-15 Score=117.58 Aligned_cols=104 Identities=11% Similarity=0.068 Sum_probs=84.3
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCC-CCCCCc
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASF-GDNGPY 90 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~-~~~~~f 90 (165)
+++..+. .++.+|||| ||+|.++..+++...+|+++|+++++++.|+ ++..+. ++++++.+|+.+.. ...++|
T Consensus 60 ~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~f 137 (285)
T 4htf_A 60 RVLAEMG--PQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPV 137 (285)
T ss_dssp HHHHHTC--SSCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCE
T ss_pred HHHHhcC--CCCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCc
Confidence 4444442 347899999 9999999999998889999999999999996 555666 58999999987643 245789
Q ss_pred cEEEEcCCCCCch------HHHHhccccCcEEEEEec
Q psy8015 91 DAIHVGAAYPRYP------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 91 D~I~i~~~~~~~p------~~l~~~LkpgG~lvi~~~ 121 (165)
|+|++....++++ .++.+.|||||++++...
T Consensus 138 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 138 DLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred eEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9999998887655 367899999999999764
No 63
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.58 E-value=7.6e-15 Score=116.58 Aligned_cols=109 Identities=16% Similarity=0.057 Sum_probs=88.3
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG 85 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~ 85 (165)
.....+++.+....++.+|||| ||+|..+..+++. ..+|+++|+++.+++.|+ .+..+. |++++.+|+.+ ++
T Consensus 8 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~-~~ 85 (284)
T 3gu3_A 8 DYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATE-IE 85 (284)
T ss_dssp HHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTT-CC
T ss_pred HHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhh-cC
Confidence 4556666666555789999999 9999999999987 358999999999999996 344444 89999999976 34
Q ss_pred CCCCccEEEEcCCCCCch------HHHHhccccCcEEEEEecC
Q psy8015 86 DNGPYDAIHVGAAYPRYP------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 86 ~~~~fD~I~i~~~~~~~p------~~l~~~LkpgG~lvi~~~~ 122 (165)
..++||+|++....++++ .++.+.|||||++++....
T Consensus 86 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 86 LNDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CSSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 357899999998877665 3578999999999987654
No 64
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.58 E-value=1.8e-15 Score=114.87 Aligned_cols=113 Identities=8% Similarity=0.078 Sum_probs=84.4
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG 85 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~ 85 (165)
.......+++++....++.+|||+ ||+|.++..++... .+|+++|+|++|++.|+ ++..+.+|++++++|+.+.++
T Consensus 38 ~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~ 117 (202)
T 2fpo_A 38 TDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLA 117 (202)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHS
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHh
Confidence 445556677776431278999999 99999999765544 69999999999999996 555677789999999865332
Q ss_pred -CCCCccEEEEcCCCC--Cch---HHHHh--ccccCcEEEEEecC
Q psy8015 86 -DNGPYDAIHVGAAYP--RYP---EIFIH--HLKSGGRLVIPIGD 122 (165)
Q Consensus 86 -~~~~fD~I~i~~~~~--~~p---~~l~~--~LkpgG~lvi~~~~ 122 (165)
..++||+|+++..++ ... +.+.+ .|+|||++++.+..
T Consensus 118 ~~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 118 QKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SCCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred hcCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 346899999987743 222 23433 49999999998764
No 65
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.58 E-value=2.2e-14 Score=110.82 Aligned_cols=111 Identities=13% Similarity=0.053 Sum_probs=90.9
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASFGD 86 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~~~ 86 (165)
+...+.++..+. ..++++|||+ ||+|.++..+++...+|+++|+++++++.|+ .+..++ +|++++.+|..+...+
T Consensus 77 ~~~~~~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 155 (248)
T 2yvl_A 77 PKDSFYIALKLN-LNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP 155 (248)
T ss_dssp HHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC
T ss_pred chhHHHHHHhcC-CCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC
Confidence 455566666664 4789999999 9999999999988789999999999999996 455566 6899999999875524
Q ss_pred CCCccEEEEcCCCC-CchHHHHhccccCcEEEEEecC
Q psy8015 87 NGPYDAIHVGAAYP-RYPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 87 ~~~fD~I~i~~~~~-~~p~~l~~~LkpgG~lvi~~~~ 122 (165)
.+.||+|+++...+ ...+.+.+.|+|||++++....
T Consensus 156 ~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 156 EGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp TTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred CCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 46899999976544 5567889999999999998874
No 66
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.58 E-value=7.3e-15 Score=109.58 Aligned_cols=103 Identities=16% Similarity=-0.021 Sum_probs=84.0
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCCCccE
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNGPYDA 92 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~~fD~ 92 (165)
.+++.+. ..++.+|||+ ||+|.++..+++...+|+++|+++.+++.|+ .+..+.+|++++.+|..+... .++||+
T Consensus 23 ~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~ 100 (199)
T 2xvm_A 23 EVLEAVK-VVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDF 100 (199)
T ss_dssp HHHHHTT-TSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEE
T ss_pred HHHHHhh-ccCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceE
Confidence 4555654 3678899999 9999999999988779999999999999996 444566789999999876433 578999
Q ss_pred EEEcCCCCCch--------HHHHhccccCcEEEEEe
Q psy8015 93 IHVGAAYPRYP--------EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 93 I~i~~~~~~~p--------~~l~~~LkpgG~lvi~~ 120 (165)
|++....++++ +.+.+.|||||++++..
T Consensus 101 v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 101 ILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp EEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 99998776554 35789999999988754
No 67
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.58 E-value=3.2e-15 Score=116.31 Aligned_cols=98 Identities=14% Similarity=0.032 Sum_probs=81.5
Q ss_pred CCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCCCCCCccEEEEcC
Q psy8015 24 HSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFGDNGPYDAIHVGA 97 (165)
Q Consensus 24 ~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~~~~~fD~I~i~~ 97 (165)
..++.+|||| ||+|+++..+++.. .+|+++|+++.+++.|+ .+..|+. +|+++.+|+.+.+++.++||+|++.+
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 3688999999 99999999999975 48999999999999996 6777886 49999999987776544799999876
Q ss_pred CCC----CchHHHHhccccCcEEEEEec
Q psy8015 98 AYP----RYPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 98 ~~~----~~p~~l~~~LkpgG~lvi~~~ 121 (165)
... .+.+...+.|+|+|++|+.-.
T Consensus 93 ~Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 93 MGGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp ECHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred CChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 543 344567789999999998654
No 68
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.58 E-value=1.1e-14 Score=113.14 Aligned_cols=112 Identities=13% Similarity=0.010 Sum_probs=90.6
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcc--cccC-CCCCeEEEEccCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPL--SSTI-DPDHDYDLIADGRAS 83 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~--~~~~-~~~nV~~~~gD~~~~ 83 (165)
+...+.+++.+. ..++.+|||+ ||+|.++..+++. ..+|+++|+++++++.|+ ++.. |.+|++++.+|+.+.
T Consensus 82 ~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~ 160 (258)
T 2pwy_A 82 PKDASAMVTLLD-LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA 160 (258)
T ss_dssp HHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC
T ss_pred chHHHHHHHHcC-CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc
Confidence 445567777774 5789999999 9999999999987 469999999999999996 4444 667899999998765
Q ss_pred CCCCCCccEEEEcCCCC-CchHHHHhccccCcEEEEEecCC
Q psy8015 84 FGDNGPYDAIHVGAAYP-RYPEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 84 ~~~~~~fD~I~i~~~~~-~~p~~l~~~LkpgG~lvi~~~~~ 123 (165)
..+.++||+|+++...+ .+.+.+.+.|+|||++++.....
T Consensus 161 ~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 161 ELEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred CCCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 22346899999976544 56678899999999999988653
No 69
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.58 E-value=6e-15 Score=114.57 Aligned_cols=107 Identities=13% Similarity=0.080 Sum_probs=87.9
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGD 86 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~ 86 (165)
+.....++++.+. ..++.+|||+ ||+|.++..+++. ..+|+++|++++|++.|+.+ ..|++++.+|+.+.. .
T Consensus 18 ~~~~~~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~---~~~~~~~~~d~~~~~-~ 92 (259)
T 2p35_A 18 RTRPARDLLAQVP-LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR---LPNTNFGKADLATWK-P 92 (259)
T ss_dssp GGHHHHHHHTTCC-CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH---STTSEEEECCTTTCC-C
T ss_pred HHHHHHHHHHhcC-CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---CCCcEEEECChhhcC-c
Confidence 4455566666664 3678999999 9999999999987 67999999999999999743 458999999987643 5
Q ss_pred CCCccEEEEcCCCCCch------HHHHhccccCcEEEEEec
Q psy8015 87 NGPYDAIHVGAAYPRYP------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 87 ~~~fD~I~i~~~~~~~p------~~l~~~LkpgG~lvi~~~ 121 (165)
.++||+|++....++++ .++.+.|||||++++...
T Consensus 93 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 93 AQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp SSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 67899999998887664 357899999999999774
No 70
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.58 E-value=6.7e-15 Score=116.94 Aligned_cols=101 Identities=10% Similarity=-0.015 Sum_probs=84.3
Q ss_pred HhcCCCCCeEEEE-ccccHHHHHHhccCC--cEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCCCccEEEE
Q psy8015 21 LSGHSKRLDCLAL-TSNTKQSTTLPTFIP--NSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNGPYDAIHV 95 (165)
Q Consensus 21 l~~~~~~~~vLei-~GsG~~t~~la~~~~--~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i 95 (165)
+....++++|||+ ||+|.++..+|+.++ +|+++|+++++++.|+ ++..+++|++++.+|+.+. +..++||+|++
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~~~~~D~Vi~ 192 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-ELKDVADRVIM 192 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CCTTCEEEEEE
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-CccCCceEEEE
Confidence 4345789999999 999999999999865 9999999999999996 5666788999999999775 44568999999
Q ss_pred cCCC--CCchHHHHhccccCcEEEEEecC
Q psy8015 96 GAAY--PRYPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 96 ~~~~--~~~p~~l~~~LkpgG~lvi~~~~ 122 (165)
+... ..+.+.+.+.|+|||++++.+..
T Consensus 193 d~p~~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 193 GYVHKTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp CCCSSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred CCcccHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 8764 23446778999999999998753
No 71
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.58 E-value=4.9e-15 Score=111.79 Aligned_cols=108 Identities=12% Similarity=0.025 Sum_probs=86.2
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFG 85 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~ 85 (165)
+....++++.+. ..++ +|||+ ||+|.++..+++. ..+|+++|+++++++.|+ ++..+.. |++++.+|..+...
T Consensus 30 ~~~~~~~~~~~~-~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 107 (219)
T 3dlc_A 30 PIIAENIINRFG-ITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI 107 (219)
T ss_dssp HHHHHHHHHHHC-CCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS
T ss_pred HHHHHHHHHhcC-CCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC
Confidence 344566677664 3455 99999 9999999999987 458999999999999996 5555654 79999999976433
Q ss_pred CCCCccEEEEcCCCCCch------HHHHhccccCcEEEEEe
Q psy8015 86 DNGPYDAIHVGAAYPRYP------EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 86 ~~~~fD~I~i~~~~~~~p------~~l~~~LkpgG~lvi~~ 120 (165)
+.++||+|++....++++ .++.+.|||||++++..
T Consensus 108 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 108 EDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEe
Confidence 457899999998877654 36789999999999964
No 72
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.58 E-value=2.2e-15 Score=116.14 Aligned_cols=109 Identities=11% Similarity=0.091 Sum_probs=86.3
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRAS 83 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~ 83 (165)
.+.....+..++. ..++.+|||+ ||+|+.+..+++.. .+|+++|+++++++.|+ ++..+.. +++++.+|+.+.
T Consensus 39 ~~~~~~~l~~~~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 117 (233)
T 2gpy_A 39 DLLGMESLLHLLK-MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQL 117 (233)
T ss_dssp CHHHHHHHHHHHH-HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS
T ss_pred CHHHHHHHHHHHh-ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 3444444444443 3678999999 99999999999884 79999999999999996 5666764 699999998764
Q ss_pred CCC---CCCccEEEEcCCCCCch---HHHHhccccCcEEEEE
Q psy8015 84 FGD---NGPYDAIHVGAAYPRYP---EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 84 ~~~---~~~fD~I~i~~~~~~~p---~~l~~~LkpgG~lvi~ 119 (165)
++. .++||+|+++...+..+ +.+.+.|+|||++++.
T Consensus 118 ~~~~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 118 GEKLELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp HHHHTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHhcccCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 332 36899999998876554 5778999999999986
No 73
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.58 E-value=1.5e-15 Score=116.35 Aligned_cols=110 Identities=15% Similarity=0.081 Sum_probs=86.6
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRA 82 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~ 82 (165)
++...+.++..+....++.+|||+ ||+|+.+..+++. ..+|+++|+++++++.|+ ++..+. ++++++.+|+.+
T Consensus 53 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 132 (229)
T 2avd_A 53 MTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALE 132 (229)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHH
Confidence 444556666666555678999999 9999999999986 468999999999999996 556666 579999999854
Q ss_pred CCCC---C---CCccEEEEcCCCCCch---HHHHhccccCcEEEEE
Q psy8015 83 SFGD---N---GPYDAIHVGAAYPRYP---EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 83 ~~~~---~---~~fD~I~i~~~~~~~p---~~l~~~LkpgG~lvi~ 119 (165)
.++. . ++||+|+++.....++ +.+.+.|+|||++++.
T Consensus 133 ~~~~~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 133 TLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp HHHHHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 3221 1 6899999988765443 5678999999999884
No 74
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.58 E-value=8.5e-15 Score=115.48 Aligned_cols=111 Identities=14% Similarity=0.045 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcc--cccC-C--CCCeEEEEccCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPL--SSTI-D--PDHDYDLIADGR 81 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~--~~~~-~--~~nV~~~~gD~~ 81 (165)
+...+.+++.+. ..++.+|||+ ||+|.++..+++. ..+|+++|+++++++.|+ ++.. | .+|++++.+|+.
T Consensus 85 ~~~~~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~ 163 (280)
T 1i9g_A 85 PKDAAQIVHEGD-IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLA 163 (280)
T ss_dssp HHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGG
T ss_pred HHHHHHHHHHcC-CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchH
Confidence 455667777774 5789999999 9999999999986 469999999999999996 4444 4 568999999987
Q ss_pred CCCCCCCCccEEEEcCCCC-CchHHHHhccccCcEEEEEecC
Q psy8015 82 ASFGDNGPYDAIHVGAAYP-RYPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 82 ~~~~~~~~fD~I~i~~~~~-~~p~~l~~~LkpgG~lvi~~~~ 122 (165)
+...+.++||+|+++...+ .+.+.+.+.|+|||++++.+..
T Consensus 164 ~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 164 DSELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp GCCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred hcCCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 6543456899999976544 5667889999999999998764
No 75
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.57 E-value=2.2e-14 Score=112.45 Aligned_cols=107 Identities=9% Similarity=-0.003 Sum_probs=87.3
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNG 88 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~ 88 (165)
.+.....+++.+. ..++.+|||| ||+|.++..+++...+|+++|+|+.|++.|+.+. |++++.+|+.+...+.+
T Consensus 19 ~~~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~d~~~~~~~~~ 93 (261)
T 3ege_A 19 DIRIVNAIINLLN-LPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP----QVEWFTGYAENLALPDK 93 (261)
T ss_dssp CHHHHHHHHHHHC-CCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT----TEEEECCCTTSCCSCTT
T ss_pred cHHHHHHHHHHhC-CCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc----CCEEEECchhhCCCCCC
Confidence 4556677777774 4789999999 9999999999997789999999999999886432 89999999976433457
Q ss_pred CccEEEEcCCCCCch------HHHHhccccCcEEEEEecC
Q psy8015 89 PYDAIHVGAAYPRYP------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 89 ~fD~I~i~~~~~~~p------~~l~~~LkpgG~lvi~~~~ 122 (165)
+||+|++....++++ .++.+.|| ||++++....
T Consensus 94 ~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 94 SVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp CBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred CEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 999999998887654 36789999 9988876543
No 76
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.57 E-value=7.8e-15 Score=116.80 Aligned_cols=106 Identities=10% Similarity=-0.019 Sum_probs=85.2
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCC-cEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCCCCCC
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIP-NSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRASFGD 86 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~-~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~~~~~ 86 (165)
....++.+.+ +++++|||+ ||+|+++..+++... +|+++|+|+++++.|+ .+..+++| ++++++|+.+...
T Consensus 114 ~~~~~l~~~~---~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~- 189 (278)
T 2frn_A 114 KERVRMAKVA---KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG- 189 (278)
T ss_dssp HHHHHHHHHC---CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-
T ss_pred HHHHHHHHhC---CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-
Confidence 4445555543 579999999 999999999999876 5999999999999996 55557765 9999999987554
Q ss_pred CCCccEEEEcCCCC--CchHHHHhccccCcEEEEEec
Q psy8015 87 NGPYDAIHVGAAYP--RYPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 87 ~~~fD~I~i~~~~~--~~p~~l~~~LkpgG~lvi~~~ 121 (165)
.++||+|+++.... .+.+.+.+.|||||++++...
T Consensus 190 ~~~fD~Vi~~~p~~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 190 ENIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp CSCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred cCCccEEEECCchhHHHHHHHHHHHCCCCeEEEEEEe
Confidence 67899999976543 345678899999999999553
No 77
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.57 E-value=5.1e-15 Score=123.17 Aligned_cols=113 Identities=12% Similarity=0.072 Sum_probs=88.5
Q ss_pred chHHHHHHHHHHhc-----CCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCC
Q psy8015 10 VSGAVAKYVTYLSG-----HSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGR 81 (165)
Q Consensus 10 ~~~~~~~~l~~l~~-----~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~ 81 (165)
.......+++.+.. ..++.+|||+ ||+|.++..+++...+|+++|+|+.+++.|+ ++..+. +++++.+|+.
T Consensus 212 ~d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~-~v~~~~~D~~ 290 (381)
T 3dmg_A 212 VDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANAL-KAQALHSDVD 290 (381)
T ss_dssp CCHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTC-CCEEEECSTT
T ss_pred CCHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCC-CeEEEEcchh
Confidence 34444555555532 1368899999 9999999999998889999999999999996 444454 4899999998
Q ss_pred CCCCCCCCccEEEEcCCCCC-----c------hHHHHhccccCcEEEEEecCC
Q psy8015 82 ASFGDNGPYDAIHVGAAYPR-----Y------PEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 82 ~~~~~~~~fD~I~i~~~~~~-----~------p~~l~~~LkpgG~lvi~~~~~ 123 (165)
+...+.++||+|+++...+. . .+.+.+.|||||++++.++..
T Consensus 291 ~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 291 EALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp TTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred hccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 76555579999999877664 1 235678999999999987653
No 78
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.57 E-value=2.2e-14 Score=110.29 Aligned_cols=96 Identities=15% Similarity=0.035 Sum_probs=81.8
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCCch
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPRYP 103 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~~p 103 (165)
.++.+|||+ ||+|.++..+++...+|+++|+++.+++.|+.+. ...+++++.+|+.+...+.++||+|++....++++
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERG-EGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTT-CBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhc-ccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc
Confidence 578999999 9999999999998889999999999999997432 34689999999976433467999999999888765
Q ss_pred H------HHHhccccCcEEEEEec
Q psy8015 104 E------IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 104 ~------~l~~~LkpgG~lvi~~~ 121 (165)
+ .+.+.|+|||++++...
T Consensus 131 ~~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 131 EPLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHhCCCeEEEEEEc
Confidence 3 57899999999999764
No 79
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.57 E-value=4.2e-15 Score=111.47 Aligned_cols=97 Identities=12% Similarity=0.138 Sum_probs=78.6
Q ss_pred CCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCC-CCCCCccEEEE
Q psy8015 24 HSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASF-GDNGPYDAIHV 95 (165)
Q Consensus 24 ~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~-~~~~~fD~I~i 95 (165)
.+++++|||+ ||+|..+..+++.. ++|+++|+++++++.|+ ++..+. +|++++.+|+.+.. ...++||+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 3789999999 99999999999874 59999999999999996 566676 68999999986532 23478999999
Q ss_pred cCCC-C--------------CchHHHHhccccCcEEEEEe
Q psy8015 96 GAAY-P--------------RYPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 96 ~~~~-~--------------~~p~~l~~~LkpgG~lvi~~ 120 (165)
+... + .+.+.+.+.|||||++++..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 8644 1 12346789999999999876
No 80
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.57 E-value=8.4e-16 Score=119.11 Aligned_cols=109 Identities=16% Similarity=0.146 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRAS 83 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~ 83 (165)
+...++++..+....++.+|||+ ||+|+.+..+++.. ++|+++|+++++++.|+ ++..+.. +++++.+|+.+.
T Consensus 57 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 136 (232)
T 3cbg_A 57 SPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALAT 136 (232)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 44556666665544578899999 99999999999874 58999999999999996 5556664 599999997542
Q ss_pred CCC----C--CCccEEEEcCCCCCch---HHHHhccccCcEEEEE
Q psy8015 84 FGD----N--GPYDAIHVGAAYPRYP---EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 84 ~~~----~--~~fD~I~i~~~~~~~p---~~l~~~LkpgG~lvi~ 119 (165)
++. . ++||+||+++..+.++ +.+.+.|+|||++++.
T Consensus 137 l~~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 137 LEQLTQGKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp HHHHHTSSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHhcCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 221 2 6899999998755443 5678999999999984
No 81
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.56 E-value=6.1e-15 Score=113.72 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=80.2
Q ss_pred CCCeEEEE-ccccHHHHHHhccCC--cEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC---CCCCCccEEEEcC
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTFIP--NSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF---GDNGPYDAIHVGA 97 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~~~--~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~---~~~~~fD~I~i~~ 97 (165)
++.+|||| ||+|.++..+|+... +|+++|+++++++.|+ .+..+++|++++.+|+.+.+ .+.++||.|++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 57899999 999999999998763 6999999999999996 56678889999999987632 2357999999985
Q ss_pred CCCC--------------chHHHHhccccCcEEEEEecCC
Q psy8015 98 AYPR--------------YPEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 98 ~~~~--------------~p~~l~~~LkpgG~lvi~~~~~ 123 (165)
..+. +.+.+.+.|||||++++.....
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~ 153 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE 153 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 4431 3356778999999999987654
No 82
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.56 E-value=3.2e-15 Score=117.54 Aligned_cols=98 Identities=15% Similarity=0.082 Sum_probs=80.5
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCC---CCCccEEEEc
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGD---NGPYDAIHVG 96 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~---~~~fD~I~i~ 96 (165)
.++.+|||| ||+|+.+..+|... .+|+++|+++++++.|+ .+.++++||+++++|+.+.... .++||+|++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 368899999 99999999999874 58999999999999996 5667888999999998653321 3689999997
Q ss_pred CCCC--CchHHHHhccccCcEEEEEecC
Q psy8015 97 AAYP--RYPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 97 ~~~~--~~p~~l~~~LkpgG~lvi~~~~ 122 (165)
+..+ .+.+.+.+.|||||++++..+.
T Consensus 159 a~~~~~~ll~~~~~~LkpgG~l~~~~g~ 186 (249)
T 3g89_A 159 AVAPLCVLSELLLPFLEVGGAAVAMKGP 186 (249)
T ss_dssp SSCCHHHHHHHHGGGEEEEEEEEEEECS
T ss_pred CcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 6432 3445678999999999998764
No 83
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.56 E-value=1.1e-14 Score=115.41 Aligned_cols=107 Identities=11% Similarity=0.007 Sum_probs=83.7
Q ss_pred HHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcc--cccC-CCCCeEEEEccCCCCCCCC
Q psy8015 15 AKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPL--SSTI-DPDHDYDLIADGRASFGDN 87 (165)
Q Consensus 15 ~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~--~~~~-~~~nV~~~~gD~~~~~~~~ 87 (165)
..+++.+. ..++.+|||+ ||+|.++..+++. ..+|+++|+++++++.|+ ++.. |.+|++++.+|+.+.++ .
T Consensus 100 ~~~~~~~~-~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~-~ 177 (275)
T 1yb2_A 100 SYIIMRCG-LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS-D 177 (275)
T ss_dssp ------CC-CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC-S
T ss_pred HHHHHHcC-CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCc-C
Confidence 34555553 4789999999 9999999999987 579999999999999996 5555 77799999999987444 4
Q ss_pred CCccEEEEcCCCC-CchHHHHhccccCcEEEEEecCC
Q psy8015 88 GPYDAIHVGAAYP-RYPEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 88 ~~fD~I~i~~~~~-~~p~~l~~~LkpgG~lvi~~~~~ 123 (165)
++||+|+++...+ .+.+.+.+.|||||++++.....
T Consensus 178 ~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 178 QMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp CCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred CCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 6899999964432 45578899999999999987653
No 84
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.56 E-value=9.9e-15 Score=113.39 Aligned_cols=96 Identities=10% Similarity=0.004 Sum_probs=79.7
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCC-cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCCc
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIP-NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPRY 102 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~-~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~~ 102 (165)
.++.+|||+ ||+|.++..+++... +|+++|+++++++.|+.+. ...+++++.+|+.....+.++||+|++....+++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 121 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKT-TSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYI 121 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHC-CCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhh-ccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhh
Confidence 478999999 999999999998875 9999999999999997322 1468999999987643345799999999887765
Q ss_pred h------HHHHhccccCcEEEEEec
Q psy8015 103 P------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 103 p------~~l~~~LkpgG~lvi~~~ 121 (165)
+ .++.+.|||||++++.+.
T Consensus 122 ~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 122 ASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 4 367899999999999753
No 85
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.56 E-value=2.2e-14 Score=109.30 Aligned_cols=98 Identities=12% Similarity=0.111 Sum_probs=80.3
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC--CCCCCccEEEEcC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF--GDNGPYDAIHVGA 97 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~--~~~~~fD~I~i~~ 97 (165)
.++.+|||+ ||+|.++..+++.. .+|+++|+++++++.|+ .+..+++|++++.+|+.+.. .+.++||.|+++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 468999999 99999999999875 58999999999999996 55567789999999997632 2356899999987
Q ss_pred CCCC--------------chHHHHhccccCcEEEEEecC
Q psy8015 98 AYPR--------------YPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 98 ~~~~--------------~p~~l~~~LkpgG~lvi~~~~ 122 (165)
..+. +.+.+.+.|+|||++++....
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 6542 334678999999999998754
No 86
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.56 E-value=4.8e-15 Score=123.03 Aligned_cols=117 Identities=13% Similarity=0.054 Sum_probs=91.6
Q ss_pred EecCCchHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCC---CeEEE
Q psy8015 5 FVSGSVSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPD---HDYDL 76 (165)
Q Consensus 5 ~~~~~~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~---nV~~~ 76 (165)
|+...+......+++.+.. .++.+|||+ ||+|.++..+++.. .+|+++|+|+.+++.|+ .+..++. +++++
T Consensus 202 Fs~~~~d~~~~~ll~~l~~-~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~ 280 (375)
T 4dcm_A 202 FSRTGLDIGARFFMQHLPE-NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM 280 (375)
T ss_dssp TTCSSCCHHHHHHHHTCCC-SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEE
T ss_pred ccCCcccHHHHHHHHhCcc-cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEE
Confidence 4444566666778888754 667999999 99999999999984 68999999999999996 4444543 68999
Q ss_pred EccCCCCCCCCCCccEEEEcCCCCC-----------chHHHHhccccCcEEEEEecCC
Q psy8015 77 IADGRASFGDNGPYDAIHVGAAYPR-----------YPEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 77 ~gD~~~~~~~~~~fD~I~i~~~~~~-----------~p~~l~~~LkpgG~lvi~~~~~ 123 (165)
.+|+.+.++ .++||+|+++..++. +.+.+.+.|||||++++.....
T Consensus 281 ~~D~~~~~~-~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 281 INNALSGVE-PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp ECSTTTTCC-TTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred echhhccCC-CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 999987554 468999999877652 2356789999999999987643
No 87
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.56 E-value=1.3e-14 Score=114.82 Aligned_cols=104 Identities=13% Similarity=-0.031 Sum_probs=84.8
Q ss_pred HHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCCCcc
Q psy8015 15 AKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNGPYD 91 (165)
Q Consensus 15 ~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~~fD 91 (165)
..+++.+.. .++.+|||+ ||+|.++..+++...+|+++|+|+.+++.|+ .+..+. +++++.+|+.+... .++||
T Consensus 110 ~~~~~~~~~-~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~-~~~fD 186 (286)
T 3m70_A 110 GDVVDAAKI-ISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI-QENYD 186 (286)
T ss_dssp HHHHHHHHH-SCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC-CSCEE
T ss_pred HHHHHHhhc-cCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc-cCCcc
Confidence 345556644 478999999 9999999999998889999999999999996 455566 89999999876433 67899
Q ss_pred EEEEcCCCCCch--------HHHHhccccCcEEEEEec
Q psy8015 92 AIHVGAAYPRYP--------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 92 ~I~i~~~~~~~p--------~~l~~~LkpgG~lvi~~~ 121 (165)
+|++....++++ +.+.+.|||||++++...
T Consensus 187 ~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 187 FIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp EEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 999998876553 357899999999887653
No 88
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.56 E-value=6.1e-15 Score=114.06 Aligned_cols=96 Identities=9% Similarity=-0.030 Sum_probs=78.3
Q ss_pred CCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCC
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPR 101 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~ 101 (165)
++.+|||+ ||+|.++..+++.. .+|+++|+++++++.|+ .+..+..+++++.+|+.....+.++||+|++....++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 58999999 99999999988764 59999999999999996 4433345799999998664444568999999988776
Q ss_pred chH--------HHHhccccCcEEEEEec
Q psy8015 102 YPE--------IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 102 ~p~--------~l~~~LkpgG~lvi~~~ 121 (165)
+++ .+.+.|||||++++...
T Consensus 159 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 653 46789999999999553
No 89
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.56 E-value=3.2e-15 Score=109.00 Aligned_cols=114 Identities=7% Similarity=-0.058 Sum_probs=87.2
Q ss_pred chHHHHHHHHHHhcC-CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC
Q psy8015 10 VSGAVAKYVTYLSGH-SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG 85 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~-~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~ 85 (165)
.......+++++... .++.+|||+ ||+|.++..+++...+|+++|+|+++++.|+ .+..+. |++++++|+.+..+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~ 102 (171)
T 1ws6_A 24 PVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLP 102 (171)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHH
Confidence 445566677776531 278999999 9999999999998777999999999999996 444556 89999999865322
Q ss_pred C----CCCccEEEEcCCCC-Cc---hHHHH--hccccCcEEEEEecCCC
Q psy8015 86 D----NGPYDAIHVGAAYP-RY---PEIFI--HHLKSGGRLVIPIGDTK 124 (165)
Q Consensus 86 ~----~~~fD~I~i~~~~~-~~---p~~l~--~~LkpgG~lvi~~~~~~ 124 (165)
. .++||+|+++.... .. .+.+. +.|+|||++++.+....
T Consensus 103 ~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 103 EAKAQGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp HHHHTTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred hhhccCCceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 1 24799999986552 22 24556 88999999999887654
No 90
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.56 E-value=3.5e-14 Score=108.07 Aligned_cols=97 Identities=13% Similarity=0.076 Sum_probs=79.1
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCCCccEEEEcCC--C
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAA--Y 99 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~--~ 99 (165)
.++.+|||+ ||+|.++..+++...+|+++|+++++++.|+ .+..+ .+++++.+|..+...+.++||+|++... .
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 468999999 9999999999998889999999999999996 34444 6899999998763333568999999877 4
Q ss_pred CCch------HHHHhccccCcEEEEEecC
Q psy8015 100 PRYP------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 100 ~~~p------~~l~~~LkpgG~lvi~~~~ 122 (165)
.+.+ ..+.+.|||||++++....
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 4433 3578999999999987653
No 91
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.56 E-value=9e-15 Score=110.39 Aligned_cols=112 Identities=11% Similarity=0.012 Sum_probs=84.7
Q ss_pred EecCCchHHHHHHHHHHhc-CCCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEcc
Q psy8015 5 FVSGSVSGAVAKYVTYLSG-HSKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIAD 79 (165)
Q Consensus 5 ~~~~~~~~~~~~~l~~l~~-~~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD 79 (165)
|+++.. .....+++++.. ..++.+|||+ ||+|.++..+++.. .+|+++|+++++++.|+ ++..+..|++++.+|
T Consensus 39 f~~~~~-~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d 117 (205)
T 3grz_A 39 FGTGNH-QTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTS 117 (205)
T ss_dssp ---CCH-HHHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESS
T ss_pred cCCCCC-ccHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecc
Confidence 444432 334445555532 2678999999 99999999999874 48999999999999996 556677789999999
Q ss_pred CCCCCCCCCCccEEEEcCCCCCc---hHHHHhccccCcEEEEE
Q psy8015 80 GRASFGDNGPYDAIHVGAAYPRY---PEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 80 ~~~~~~~~~~fD~I~i~~~~~~~---p~~l~~~LkpgG~lvi~ 119 (165)
..... .++||+|+++...+.+ .+.+.+.|+|||++++.
T Consensus 118 ~~~~~--~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 158 (205)
T 3grz_A 118 LLADV--DGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFS 158 (205)
T ss_dssp TTTTC--CSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEE
T ss_pred ccccC--CCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 87643 3689999998766543 34567899999999986
No 92
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.56 E-value=2.8e-15 Score=110.99 Aligned_cols=115 Identities=10% Similarity=0.004 Sum_probs=87.4
Q ss_pred CchHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCC
Q psy8015 9 SVSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRAS 83 (165)
Q Consensus 9 ~~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~ 83 (165)
+.+.....+++++....++.+|||+ ||+|.++..+++.. .+|+++|+++++++.|+ .+..++ +|++++++|+.+.
T Consensus 27 ~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 106 (187)
T 2fhp_A 27 TTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRA 106 (187)
T ss_dssp CCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHH
Confidence 4556677788888544578999999 99999999887754 68999999999999996 455565 4799999998653
Q ss_pred CC----CCCCccEEEEcCCCC--Cch---HHH--HhccccCcEEEEEecCC
Q psy8015 84 FG----DNGPYDAIHVGAAYP--RYP---EIF--IHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 84 ~~----~~~~fD~I~i~~~~~--~~p---~~l--~~~LkpgG~lvi~~~~~ 123 (165)
.+ +.++||+|+++.... ..+ ..+ .+.|+|||++++.....
T Consensus 107 ~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 107 LEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 22 146899999986643 222 234 67799999999987654
No 93
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.55 E-value=3.4e-15 Score=110.15 Aligned_cols=113 Identities=9% Similarity=-0.014 Sum_probs=85.9
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFG 85 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~ 85 (165)
+.....+++++....++.+|||+ ||+|.++..+++.. .+|+++|+++++++.|+ ++..++. +++++.+|+.+.++
T Consensus 16 ~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (177)
T 2esr_A 16 DKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID 95 (177)
T ss_dssp --CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHH
Confidence 34466777777534678999999 99999999998874 68999999999999996 5556664 79999999865322
Q ss_pred -CCCCccEEEEcCCCC-----CchHHHH--hccccCcEEEEEecCC
Q psy8015 86 -DNGPYDAIHVGAAYP-----RYPEIFI--HHLKSGGRLVIPIGDT 123 (165)
Q Consensus 86 -~~~~fD~I~i~~~~~-----~~p~~l~--~~LkpgG~lvi~~~~~ 123 (165)
..++||+|+++.... ...+.+. +.|+|||++++.....
T Consensus 96 ~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 96 CLTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HBCSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred hhcCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 235799999986642 1223454 8899999999988754
No 94
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.55 E-value=3.7e-15 Score=115.70 Aligned_cols=97 Identities=10% Similarity=-0.007 Sum_probs=78.0
Q ss_pred CCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCC---CCCccEEEEc
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGD---NGPYDAIHVG 96 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~---~~~fD~I~i~ 96 (165)
.++.+|||+ ||+|+.+..++.. ..+|+++|++++|++.|+ .+..+++|++++++|+.+.... .++||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 368899999 9999999999953 468999999999999996 5566777899999998653211 4689999997
Q ss_pred CCCCCc---hHHHHhccccCcEEEEEecC
Q psy8015 97 AAYPRY---PEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 97 ~~~~~~---p~~l~~~LkpgG~lvi~~~~ 122 (165)
+. ..+ .+.+.+.|||||++++..+.
T Consensus 149 ~~-~~~~~~l~~~~~~LkpgG~l~~~~g~ 176 (240)
T 1xdz_A 149 AV-ARLSVLSELCLPLVKKNGLFVALKAA 176 (240)
T ss_dssp CC-SCHHHHHHHHGGGEEEEEEEEEEECC
T ss_pred cc-CCHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 73 333 35677999999999997654
No 95
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.55 E-value=8.6e-15 Score=114.22 Aligned_cols=106 Identities=14% Similarity=0.003 Sum_probs=84.3
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCCCCCCCCC
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRASFGDNGP 89 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~~~~~~~~ 89 (165)
|+-....-..++.+|||| ||+|+++..+++.. .+|+|+|+++.+++.|+ .+..|+.+ |+++.+|+.+.+.+.++
T Consensus 11 RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~ 90 (230)
T 3lec_A 11 RLQKVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADN 90 (230)
T ss_dssp HHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGC
T ss_pred HHHHHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccc
Confidence 343333334688999999 99999999999975 48999999999999996 66778765 99999999887765457
Q ss_pred ccEEEEcCCCC----CchHHHHhccccCcEEEEEec
Q psy8015 90 YDAIHVGAAYP----RYPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 90 fD~I~i~~~~~----~~p~~l~~~LkpgG~lvi~~~ 121 (165)
||+|++.+... .+.+.+.+.|+++|++++.-.
T Consensus 91 ~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 91 IDTITICGMGGRLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp CCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred cCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEECC
Confidence 99999876543 344566788999999988643
No 96
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.55 E-value=1.5e-14 Score=108.81 Aligned_cols=95 Identities=6% Similarity=-0.097 Sum_probs=80.2
Q ss_pred CCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCCch-
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPRYP- 103 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~~p- 103 (165)
++.+|||+ ||+|.++..+++...+|+++|++++|++.|+.+ ..+++++.+|+.+...+.++||+|++....++++
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 117 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQT---HPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGP 117 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHH---CTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCT
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHh---CCCCeEEeCcccccccCCCCeEEEEehhhHhcCCH
Confidence 48999999 999999999999888999999999999999743 3489999999876433457899999998887764
Q ss_pred -------HHHHhccccCcEEEEEecCC
Q psy8015 104 -------EIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 104 -------~~l~~~LkpgG~lvi~~~~~ 123 (165)
+++.+.|||||++++.....
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 118 GELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp TTHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 25789999999999987543
No 97
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.55 E-value=6.3e-15 Score=113.90 Aligned_cols=95 Identities=14% Similarity=-0.007 Sum_probs=74.1
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCC--CCCCCCccEEEE-cC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRAS--FGDNGPYDAIHV-GA 97 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~--~~~~~~fD~I~i-~~ 97 (165)
.++.+|||| ||+|+++..+++.. .+|+++|+|++|++.|+ .+..+ .|++++++|+.+. ..+.++||+|++ ..
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 678999999 99999999998865 48999999999999996 44444 5799999998654 223478999999 33
Q ss_pred CC--C--Cc------hHHHHhccccCcEEEEEe
Q psy8015 98 AY--P--RY------PEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 98 ~~--~--~~------p~~l~~~LkpgG~lvi~~ 120 (165)
.. + +. ..++.+.|||||++++..
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 22 1 11 245789999999998753
No 98
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.55 E-value=1.2e-15 Score=118.00 Aligned_cols=105 Identities=7% Similarity=-0.138 Sum_probs=84.1
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCCCCCCC
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASFGDNGP 89 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~~~~~~ 89 (165)
...+...+....++.+|||+ ||+|.++..+++...+|+++|+|+.+++.|+ ++..++ +|++++++|+.+.. ..++
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~ 144 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLK 144 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCC
T ss_pred HHHHHHHhhhccCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCC
Confidence 44455555433478999999 9999999999998899999999999999996 566677 58999999987643 4578
Q ss_pred ccEEEEcCCCCCchH------HHHhccccCcEEEEE
Q psy8015 90 YDAIHVGAAYPRYPE------IFIHHLKSGGRLVIP 119 (165)
Q Consensus 90 fD~I~i~~~~~~~p~------~l~~~LkpgG~lvi~ 119 (165)
||+|+++...+...+ ++.+.|+|||++++.
T Consensus 145 ~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 145 ADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 999999987765442 367889999987654
No 99
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.54 E-value=1.2e-14 Score=112.26 Aligned_cols=107 Identities=8% Similarity=-0.056 Sum_probs=85.4
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--CCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--FGD 86 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~~~ 86 (165)
......++...+....++.+|||| ||+|.++..+++...+|+++|+|+++++.|+.+ ++++.+|..+. ..+
T Consensus 25 ~~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~------~~~~~~d~~~~~~~~~ 98 (240)
T 3dli_A 25 RELVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK------FNVVKSDAIEYLKSLP 98 (240)
T ss_dssp HHHHHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT------SEEECSCHHHHHHTSC
T ss_pred HHHHHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh------cceeeccHHHHhhhcC
Confidence 344455566666555788999999 999999999999888999999999999998633 78899997652 123
Q ss_pred CCCccEEEEcCCCCCch--------HHHHhccccCcEEEEEecC
Q psy8015 87 NGPYDAIHVGAAYPRYP--------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 87 ~~~fD~I~i~~~~~~~p--------~~l~~~LkpgG~lvi~~~~ 122 (165)
.++||+|++....++++ .++.+.|||||++++....
T Consensus 99 ~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 99 DKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp TTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred CCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 57899999998887665 2578999999999997754
No 100
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.54 E-value=1.7e-14 Score=108.65 Aligned_cols=109 Identities=10% Similarity=-0.041 Sum_probs=84.5
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHH-HHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCC
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQ-STTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDN 87 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~-t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~ 87 (165)
....++++.+....++.+|||+ ||+|.. ...+++...+|+++|+|+++++.|+ .+..+ .+++++.+|+.+...+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~~ 87 (209)
T 2p8j_A 9 PQLYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKLPFKD 87 (209)
T ss_dssp THHHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSCCSCT
T ss_pred hhHHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhCCCCC
Confidence 3456677766655778999999 999997 4555666679999999999999996 33333 47999999987643345
Q ss_pred CCccEEEEcCCCCCch--------HHHHhccccCcEEEEEec
Q psy8015 88 GPYDAIHVGAAYPRYP--------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 88 ~~fD~I~i~~~~~~~p--------~~l~~~LkpgG~lvi~~~ 121 (165)
++||+|++....++++ +++.+.|||||++++...
T Consensus 88 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 88 ESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp TCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 7899999987776663 257899999999999764
No 101
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.54 E-value=2.1e-14 Score=113.46 Aligned_cols=104 Identities=19% Similarity=0.163 Sum_probs=85.6
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccE
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDA 92 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~ 92 (165)
...+++.+. ..++.+|||| ||+|.++..+++...+|+++|+++.|++.|+.+. +|++++.+|+.+ ++..++||+
T Consensus 46 ~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~---~~~~~~~~d~~~-~~~~~~fD~ 120 (279)
T 3ccf_A 46 GEDLLQLLN-PQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY---PHLHFDVADARN-FRVDKPLDA 120 (279)
T ss_dssp CCHHHHHHC-CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---TTSCEEECCTTT-CCCSSCEEE
T ss_pred HHHHHHHhC-CCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC---CCCEEEECChhh-CCcCCCcCE
Confidence 446677774 4788999999 9999999999997789999999999999997331 689999999876 344578999
Q ss_pred EEEcCCCCCch------HHHHhccccCcEEEEEecC
Q psy8015 93 IHVGAAYPRYP------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 93 I~i~~~~~~~p------~~l~~~LkpgG~lvi~~~~ 122 (165)
|++....++++ .++.+.|||||++++....
T Consensus 121 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 121 VFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecC
Confidence 99998877654 3678999999999997654
No 102
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.54 E-value=2.2e-14 Score=121.18 Aligned_cols=109 Identities=10% Similarity=-0.052 Sum_probs=86.3
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhc-------c--cccCC--CCCeEE
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGP-------L--SSTID--PDHDYD 75 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A-------~--~~~~~--~~nV~~ 75 (165)
.+..++++++.+. ..++++|||+ ||+|+++..+|+.. .+|+++|+++.+++.| + ++.+| ..|+++
T Consensus 227 ~p~~v~~ml~~l~-l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~ 305 (433)
T 1u2z_A 227 LPNFLSDVYQQCQ-LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEF 305 (433)
T ss_dssp CHHHHHHHHHHTT-CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEE
T ss_pred cHHHHHHHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEE
Confidence 4678889999885 5789999999 99999999999864 4799999999999988 5 45567 579999
Q ss_pred EEccCCCC-CC---CCCCccEEEEcCCCC--Cch---HHHHhccccCcEEEEE
Q psy8015 76 LIADGRAS-FG---DNGPYDAIHVGAAYP--RYP---EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 76 ~~gD~~~~-~~---~~~~fD~I~i~~~~~--~~p---~~l~~~LkpgG~lvi~ 119 (165)
+.+|.... ++ ..++||+|+++.... .++ .++.++|||||++++.
T Consensus 306 i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 306 SLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp EESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred EEcCccccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEe
Confidence 99876532 11 136899999874432 222 3788999999999986
No 103
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.54 E-value=1.6e-14 Score=109.31 Aligned_cols=101 Identities=14% Similarity=0.025 Sum_probs=82.5
Q ss_pred HHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEE
Q psy8015 17 YVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHV 95 (165)
Q Consensus 17 ~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i 95 (165)
+..++..+.++.+|||+ ||+|.++..+++...+|+++|+++++++.|+.+. +++++.+|..... ..++||+|++
T Consensus 34 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~d~~~~~-~~~~fD~v~~ 108 (211)
T 3e23_A 34 LTKFLGELPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL----GRPVRTMLFHQLD-AIDAYDAVWA 108 (211)
T ss_dssp HHHHHTTSCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----TSCCEECCGGGCC-CCSCEEEEEE
T ss_pred HHHHHHhcCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc----CCceEEeeeccCC-CCCcEEEEEe
Confidence 33444444678999999 9999999999998889999999999999997332 5778889986543 5689999999
Q ss_pred cCCCCCch--------HHHHhccccCcEEEEEecC
Q psy8015 96 GAAYPRYP--------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 96 ~~~~~~~p--------~~l~~~LkpgG~lvi~~~~ 122 (165)
....++++ .++.+.|||||++++....
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 109 HACLLHVPRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 98887765 3578999999999998754
No 104
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.54 E-value=1.6e-14 Score=111.36 Aligned_cols=96 Identities=17% Similarity=0.122 Sum_probs=75.4
Q ss_pred CCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC----CCCCCCCccEEEEc
Q psy8015 24 HSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA----SFGDNGPYDAIHVG 96 (165)
Q Consensus 24 ~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~----~~~~~~~fD~I~i~ 96 (165)
..++.+|||+ ||+|.++..+++.. ++|+++|+++++++.|+.+....+|++++.+|+.. .... ++||+|+.+
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~ 150 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYED 150 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEEC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEEe
Confidence 3678999999 99999999999986 78999999999999986221123789999999875 2222 689999966
Q ss_pred CCCCC----chHHHHhccccCcEEEEEe
Q psy8015 97 AAYPR----YPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 97 ~~~~~----~p~~l~~~LkpgG~lvi~~ 120 (165)
...+. +.+.+.+.|||||++++..
T Consensus 151 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 178 (230)
T 1fbn_A 151 VAQPNQAEILIKNAKWFLKKGGYGMIAI 178 (230)
T ss_dssp CCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCChhHHHHHHHHHHHhCCCCcEEEEEE
Confidence 43331 2456788999999999964
No 105
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.54 E-value=6.4e-15 Score=119.44 Aligned_cols=107 Identities=14% Similarity=0.029 Sum_probs=82.5
Q ss_pred HHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCC
Q psy8015 15 AKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNG 88 (165)
Q Consensus 15 ~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~ 88 (165)
..+...+....++++|||+ ||+|..|..++... ++|+++|+++++++.++ +++.|..|++++++|+.......+
T Consensus 107 s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~ 186 (315)
T 1ixk_A 107 SMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNV 186 (315)
T ss_dssp HHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCC
T ss_pred HHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccc
Confidence 3333333345889999999 99999999999875 58999999999999996 666788899999999876332346
Q ss_pred CccEEEEcCCCC------C----------------------chHHHHhccccCcEEEEEec
Q psy8015 89 PYDAIHVGAAYP------R----------------------YPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 89 ~fD~I~i~~~~~------~----------------------~p~~l~~~LkpgG~lvi~~~ 121 (165)
+||+|+++..+. + +.+.+.+.|||||++++...
T Consensus 187 ~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 187 EFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp CEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred cCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 899999975431 1 11346789999999999643
No 106
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=5.2e-14 Score=103.32 Aligned_cols=108 Identities=6% Similarity=-0.034 Sum_probs=85.7
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGD 86 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~ 86 (165)
.+.....+++.+. ..++.+|||+ ||+|.++..+++...+|+++|+++++++.|+ ++..+.+|++++.+|..+.++
T Consensus 20 ~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~- 97 (183)
T 2yxd_A 20 KEEIRAVSIGKLN-LNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLD- 97 (183)
T ss_dssp CHHHHHHHHHHHC-CCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGG-
T ss_pred HHHHHHHHHHHcC-CCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccccc-
Confidence 4555667777774 4788999999 9999999999996679999999999999996 556677889999999876443
Q ss_pred CCCccEEEEcCCCCCchH---HHHhccccCcEEEEEecC
Q psy8015 87 NGPYDAIHVGAAYPRYPE---IFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 87 ~~~fD~I~i~~~~~~~p~---~l~~~LkpgG~lvi~~~~ 122 (165)
.++||+|+++.. +...+ .+.+. |||++++....
T Consensus 98 ~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~~~ 133 (183)
T 2yxd_A 98 KLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANTIV 133 (183)
T ss_dssp GCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEESC
T ss_pred CCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEecc
Confidence 368999999887 43332 33333 99999998743
No 107
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.54 E-value=2.6e-14 Score=107.71 Aligned_cols=110 Identities=9% Similarity=-0.036 Sum_probs=85.6
Q ss_pred HHHHHHHHHHhcCC--CCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC
Q psy8015 12 GAVAKYVTYLSGHS--KRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF 84 (165)
Q Consensus 12 ~~~~~~l~~l~~~~--~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~ 84 (165)
..+..+++.+.... ++.+|||+ ||+|..+..++.. ..+|+++|+++++++.|+ .+..+.+|++++.+|+.+..
T Consensus 49 ~~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 128 (207)
T 1jsx_A 49 MLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP 128 (207)
T ss_dssp HHHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC
T ss_pred HHHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC
Confidence 34556666664311 48899999 9999999999986 468999999999999996 56667878999999987643
Q ss_pred CCCCCccEEEEcCCCCCc---hHHHHhccccCcEEEEEecCC
Q psy8015 85 GDNGPYDAIHVGAAYPRY---PEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 85 ~~~~~fD~I~i~~~~~~~---p~~l~~~LkpgG~lvi~~~~~ 123 (165)
+.++||+|++... +.+ .+.+.+.|+|||++++..+..
T Consensus 129 -~~~~~D~i~~~~~-~~~~~~l~~~~~~L~~gG~l~~~~~~~ 168 (207)
T 1jsx_A 129 -SEPPFDGVISRAF-ASLNDMVSWCHHLPGEQGRFYALKGQM 168 (207)
T ss_dssp -CCSCEEEEECSCS-SSHHHHHHHHTTSEEEEEEEEEEESSC
T ss_pred -ccCCcCEEEEecc-CCHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 3468999997643 333 356788999999999987654
No 108
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.54 E-value=2.6e-14 Score=114.01 Aligned_cols=110 Identities=9% Similarity=0.065 Sum_probs=86.5
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCC---CCeEEEEccCCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDP---DHDYDLIADGRAS 83 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~---~nV~~~~gD~~~~ 83 (165)
.......+++.+. .++.+|||| ||+|.++..+++...+|+++|+++.+++.|+ ....+. .|++++++|+.+.
T Consensus 68 ~~~~~~~~~~~~~--~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (299)
T 3g2m_A 68 GTSEAREFATRTG--PVSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF 145 (299)
T ss_dssp CHHHHHHHHHHHC--CCCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC
T ss_pred ccHHHHHHHHhhC--CCCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC
Confidence 3456677777774 345599999 9999999999998889999999999999996 444443 5899999999763
Q ss_pred CCCCCCccEEEEc-CCCCCch--------HHHHhccccCcEEEEEecC
Q psy8015 84 FGDNGPYDAIHVG-AAYPRYP--------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 84 ~~~~~~fD~I~i~-~~~~~~p--------~~l~~~LkpgG~lvi~~~~ 122 (165)
+..++||+|++. ...+.++ .++.+.|||||++++....
T Consensus 146 -~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 146 -ALDKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp -CCSCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -CcCCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 336789999875 3344443 3578999999999998754
No 109
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.54 E-value=1.8e-14 Score=110.36 Aligned_cols=98 Identities=9% Similarity=0.087 Sum_probs=79.5
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC--CCCCCccEEEEcC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF--GDNGPYDAIHVGA 97 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~--~~~~~fD~I~i~~ 97 (165)
.++.+|||| ||+|.++..+|+.. .+|+++|+++++++.|+ .+..+++|++++.+|+.+.. .+.++||.|++..
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 468899999 99999999999874 58999999999999996 55667889999999987521 2346899999876
Q ss_pred CCCC--------------chHHHHhccccCcEEEEEecC
Q psy8015 98 AYPR--------------YPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 98 ~~~~--------------~p~~l~~~LkpgG~lvi~~~~ 122 (165)
..+. +.+.+.+.|||||++++....
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5432 234678999999999998754
No 110
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.54 E-value=2.7e-14 Score=110.59 Aligned_cols=106 Identities=9% Similarity=-0.008 Sum_probs=83.2
Q ss_pred HHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccE
Q psy8015 15 AKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDA 92 (165)
Q Consensus 15 ~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~ 92 (165)
..+++.+. ..++.+|||+ ||+|.++..+++. ..+|+++|+++.+++.|+.+.....+++++.+|......+.++||+
T Consensus 83 ~~~l~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 161 (254)
T 1xtp_A 83 RNFIASLP-GHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDL 161 (254)
T ss_dssp HHHHHTST-TCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEE
T ss_pred HHHHHhhc-ccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEE
Confidence 34455543 2578999999 9999999988876 4679999999999999973222226799999998764334578999
Q ss_pred EEEcCCCCCch--------HHHHhccccCcEEEEEec
Q psy8015 93 IHVGAAYPRYP--------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 93 I~i~~~~~~~p--------~~l~~~LkpgG~lvi~~~ 121 (165)
|++....++++ ..+.+.|||||++++...
T Consensus 162 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 162 IVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 99999888774 256899999999999764
No 111
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.53 E-value=1.3e-14 Score=114.08 Aligned_cols=98 Identities=9% Similarity=-0.090 Sum_probs=80.9
Q ss_pred CCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCCCCCCCCCccEEEEcC
Q psy8015 24 HSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRASFGDNGPYDAIHVGA 97 (165)
Q Consensus 24 ~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~~~~~~~~fD~I~i~~ 97 (165)
..++.+|||| ||+|+++..+++.. .+|+|+|+++.+++.|+ .+..|+.+ |+++.+|+.+.+.+..+||+|++.+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 3688999999 99999999999975 48999999999999996 66778865 9999999988776544699998865
Q ss_pred CCC----CchHHHHhccccCcEEEEEec
Q psy8015 98 AYP----RYPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 98 ~~~----~~p~~l~~~LkpgG~lvi~~~ 121 (165)
... .+.+...+.|+++|++|+.-.
T Consensus 99 mGg~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 99 MGGTLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp ECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred CchHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 543 344566788999999998643
No 112
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.53 E-value=1.6e-14 Score=112.26 Aligned_cols=94 Identities=14% Similarity=-0.011 Sum_probs=74.0
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC--CCCCCccEEEEcCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF--GDNGPYDAIHVGAA 98 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~--~~~~~fD~I~i~~~ 98 (165)
.+|.+|||| ||+|+.+..+++.. .+|+++|+|+++++.|+ .+.. ..+++++.+|+.... .+.++||.|+.+..
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ-THKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGC-SSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhC-CCceEEEeehHHhhcccccccCCceEEEeee
Confidence 689999999 99999999998865 68999999999999997 3333 347899999975422 23578999998754
Q ss_pred CC-----Cch------HHHHhccccCcEEEEE
Q psy8015 99 YP-----RYP------EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 99 ~~-----~~p------~~l~~~LkpgG~lvi~ 119 (165)
.. +.+ +++.+.|||||++++.
T Consensus 138 ~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 43 333 3578999999999874
No 113
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.53 E-value=1.4e-14 Score=110.35 Aligned_cols=114 Identities=11% Similarity=0.021 Sum_probs=84.5
Q ss_pred ecCCchHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHh----cc--cccCCCCCeEEE
Q psy8015 6 VSGSVSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGG----PL--SSTIDPDHDYDL 76 (165)
Q Consensus 6 ~~~~~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~----A~--~~~~~~~nV~~~ 76 (165)
.+..........++++.. .++.+|||+ ||+|.++..+++. ..+|+++|++++|++. |+ .+..+.+|++++
T Consensus 8 ~~~~~~~~~~~~~~~l~~-~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~ 86 (218)
T 3mq2_A 8 VGKRVQEFSDAEFEQLRS-QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYL 86 (218)
T ss_dssp ETTEEEECCHHHHHHHHT-TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEE
T ss_pred cCccccccCHHHHHHhhc-cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEE
Confidence 334444555667777754 789999999 9999999999998 4689999999998885 22 344567899999
Q ss_pred EccCCCCCCCCCCccEEEEcCCC-----------CCchHHHHhccccCcEEEEEec
Q psy8015 77 IADGRASFGDNGPYDAIHVGAAY-----------PRYPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 77 ~gD~~~~~~~~~~fD~I~i~~~~-----------~~~p~~l~~~LkpgG~lvi~~~ 121 (165)
++|+.+.....+. |.+++.... ..+..++.+.|||||++++.++
T Consensus 87 ~~d~~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 87 WATAERLPPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp ECCSTTCCSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred ecchhhCCCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 9999773333344 777754322 2233578899999999999764
No 114
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.53 E-value=3.8e-14 Score=108.90 Aligned_cols=104 Identities=11% Similarity=-0.031 Sum_probs=82.6
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCC-cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEE
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIP-NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAI 93 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~-~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I 93 (165)
.+.+.+. ..++.+|||+ ||+|.++..+++... +|+++|+++++++.|+.+. ...+++++.+|..+...+.++||+|
T Consensus 34 ~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~d~~~~~~~~~~fD~v 111 (243)
T 3bkw_A 34 ALRAMLP-EVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAG-PDTGITYERADLDKLHLPQDSFDLA 111 (243)
T ss_dssp HHHHHSC-CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS-CSSSEEEEECCGGGCCCCTTCEEEE
T ss_pred HHHHhcc-ccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhc-ccCCceEEEcChhhccCCCCCceEE
Confidence 3445543 3688999999 999999999998766 9999999999999997322 1247999999987643345789999
Q ss_pred EEcCCCCCch------HHHHhccccCcEEEEEec
Q psy8015 94 HVGAAYPRYP------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 94 ~i~~~~~~~p------~~l~~~LkpgG~lvi~~~ 121 (165)
++....++++ ..+.+.|||||++++...
T Consensus 112 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 112 YSSLALHYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEeccccccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 9998776654 357899999999999764
No 115
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.53 E-value=3e-14 Score=113.68 Aligned_cols=106 Identities=8% Similarity=-0.035 Sum_probs=82.0
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHh---ccCCcEEEEeCCHHHHHhcc--cccC--CCCCeEEEEccCCCC
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLP---TFIPNSFNINVYYYLSGGPL--SSTI--DPDHDYDLIADGRAS 83 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la---~~~~~V~aiD~~~~~~~~A~--~~~~--~~~nV~~~~gD~~~~ 83 (165)
.....++..+.. .++.+|||+ ||+|..+..++ ....+|+++|+++.+++.|+ ++.. ...|++++++|+.+.
T Consensus 23 ~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~ 101 (299)
T 3g5t_A 23 SDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDF 101 (299)
T ss_dssp HHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCC
T ss_pred HHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhC
Confidence 334444444433 589999999 99999999999 45679999999999999996 3332 256899999999763
Q ss_pred CCCC------CCccEEEEcCCCCCc-----hHHHHhccccCcEEEE
Q psy8015 84 FGDN------GPYDAIHVGAAYPRY-----PEIFIHHLKSGGRLVI 118 (165)
Q Consensus 84 ~~~~------~~fD~I~i~~~~~~~-----p~~l~~~LkpgG~lvi 118 (165)
.... ++||+|++....+++ .+++.+.|||||++++
T Consensus 102 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 102 KFLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp GGGCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred CccccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 3233 689999999887654 2367899999999988
No 116
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.53 E-value=2.7e-14 Score=117.03 Aligned_cols=110 Identities=12% Similarity=-0.026 Sum_probs=88.3
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCC
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGD 86 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~ 86 (165)
..+.++.++ ...++.+|||+ ||+|.++..++... .+|+++|+|+++++.|+ ++..|+++++++++|+.+....
T Consensus 191 la~~l~~~~-~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~ 269 (354)
T 3tma_A 191 LAQALLRLA-DARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRF 269 (354)
T ss_dssp HHHHHHHHT-TCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGT
T ss_pred HHHHHHHHh-CCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccc
Confidence 444555555 45789999999 99999999999976 79999999999999996 6677877999999999775444
Q ss_pred CCCccEEEEcCCCCC--------------chHHHHhccccCcEEEEEecCC
Q psy8015 87 NGPYDAIHVGAAYPR--------------YPEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 87 ~~~fD~I~i~~~~~~--------------~p~~l~~~LkpgG~lvi~~~~~ 123 (165)
...||+|+++..+.. +.+.+.+.|||||++++.....
T Consensus 270 ~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 270 FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 567999999866532 1135678999999999988754
No 117
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.53 E-value=2e-14 Score=112.78 Aligned_cols=109 Identities=13% Similarity=0.028 Sum_probs=84.5
Q ss_pred HHHHHHHhcCC-CCCeEEEE-ccccHHHHHHhccCC-cEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCC--C
Q psy8015 15 AKYVTYLSGHS-KRLDCLAL-TSNTKQSTTLPTFIP-NSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFG--D 86 (165)
Q Consensus 15 ~~~l~~l~~~~-~~~~vLei-~GsG~~t~~la~~~~-~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~--~ 86 (165)
+.++..+.... ++.+|||+ ||+|.++..+++... +|+++|+++++++.|+ ++..++. +++++++|+.+... +
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~ 116 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIP 116 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSC
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhc
Confidence 34555554556 79999999 999999999998875 9999999999999996 5556665 59999999876432 2
Q ss_pred CCCccEEEEcCCCCC--------------------------chHHHHhccccCcEEEEEecCC
Q psy8015 87 NGPYDAIHVGAAYPR--------------------------YPEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 87 ~~~fD~I~i~~~~~~--------------------------~p~~l~~~LkpgG~lvi~~~~~ 123 (165)
.++||+|+++..+.. +.+.+.+.|||||++++.....
T Consensus 117 ~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 179 (259)
T 3lpm_A 117 KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE 179 (259)
T ss_dssp TTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH
Confidence 478999999754321 2235678999999999987543
No 118
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.52 E-value=1.1e-14 Score=112.68 Aligned_cols=117 Identities=13% Similarity=-0.011 Sum_probs=85.7
Q ss_pred CeEEEecCCchHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhc--cCCcEEEEeCC-HHHHHhc---c--cccCCCC
Q psy8015 1 MLIVFVSGSVSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPT--FIPNSFNINVY-YYLSGGP---L--SSTIDPD 71 (165)
Q Consensus 1 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~--~~~~V~aiD~~-~~~~~~A---~--~~~~~~~ 71 (165)
|.+..+...++-....+.++.. .++++|||| ||+|.++..+++ ...+|+++|+| +.|++.| + .++.+..
T Consensus 1 ~~~l~g~~~~~~~~~~~~~~~~--~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~ 78 (225)
T 3p2e_A 1 MLILKGTKTVDLSKDELTEIIG--QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS 78 (225)
T ss_dssp -CEEETTEEECCCHHHHHHHHT--TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS
T ss_pred CccccccccccCCHHHHHHHhC--CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC
Confidence 4455555556666677777764 688999999 999999999994 34689999999 7776665 4 4556788
Q ss_pred CeEEEEccCCCCCCC--CCCccEEEEcCCCCC-----------chHHHHhccccCcEEEEEe
Q psy8015 72 HDYDLIADGRASFGD--NGPYDAIHVGAAYPR-----------YPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 72 nV~~~~gD~~~~~~~--~~~fD~I~i~~~~~~-----------~p~~l~~~LkpgG~lvi~~ 120 (165)
|++++.+|+... +. .+.+|.+++....+. +..++.+.|||||++++..
T Consensus 79 ~v~~~~~d~~~l-~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 79 NVVFVIAAAESL-PFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp SEEEECCBTTBC-CGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred CeEEEEcCHHHh-hhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 999999998764 32 256777777543321 2246789999999999943
No 119
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.52 E-value=4.7e-14 Score=111.58 Aligned_cols=109 Identities=13% Similarity=0.070 Sum_probs=89.2
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCC
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASF 84 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~ 84 (165)
...+.++..+. ..++.+|||+ ||+|.++..+++. ..+|+++|+++++++.|+ ++..++ ++++++.+|..+.+
T Consensus 99 ~~~~~i~~~~~-~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 177 (277)
T 1o54_A 99 KDSSFIAMMLD-VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF 177 (277)
T ss_dssp HHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC
T ss_pred HHHHHHHHHhC-CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc
Confidence 44456677664 5789999999 9999999999987 468999999999999996 555666 57999999987764
Q ss_pred CCCCCccEEEEcCCCC-CchHHHHhccccCcEEEEEecC
Q psy8015 85 GDNGPYDAIHVGAAYP-RYPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 85 ~~~~~fD~I~i~~~~~-~~p~~l~~~LkpgG~lvi~~~~ 122 (165)
+ .++||+|+++...+ .+.+.+.+.|+|||++++....
T Consensus 178 ~-~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 178 D-EKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp S-CCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred c-CCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 4 36899999976544 5667889999999999998874
No 120
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.52 E-value=5.1e-14 Score=108.06 Aligned_cols=108 Identities=13% Similarity=0.029 Sum_probs=84.9
Q ss_pred HHHHHHHHHHhcC-CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCC
Q psy8015 12 GAVAKYVTYLSGH-SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDN 87 (165)
Q Consensus 12 ~~~~~~l~~l~~~-~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~ 87 (165)
.....+.+++... .++.+|||+ ||+|.++..+++...+|+++|+++.|++.|+ ....+. +++++.+|..+...+
T Consensus 22 ~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~- 99 (246)
T 1y8c_A 22 KWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNIN- 99 (246)
T ss_dssp HHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCCS-
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCcc-
Confidence 3444555666432 278999999 9999999999998889999999999999996 444444 799999998764333
Q ss_pred CCccEEEEcC-CCCCch---------HHHHhccccCcEEEEEec
Q psy8015 88 GPYDAIHVGA-AYPRYP---------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 88 ~~fD~I~i~~-~~~~~p---------~~l~~~LkpgG~lvi~~~ 121 (165)
++||+|++.. ..++++ ..+.+.|||||++++.+.
T Consensus 100 ~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 100 RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 7899999987 777662 246899999999998654
No 121
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.52 E-value=1.1e-14 Score=106.68 Aligned_cols=99 Identities=15% Similarity=0.113 Sum_probs=82.3
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEE
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIH 94 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~ 94 (165)
++++.+. ..++.+|||+ ||+|.++..+++...+|+++|+++++++.|+.+ .+|++++.+| ... +.++||+|+
T Consensus 8 ~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~~~v~~~~~d--~~~-~~~~~D~v~ 80 (170)
T 3i9f_A 8 EYLPNIF-EGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK---FDSVITLSDP--KEI-PDNSVDFIL 80 (170)
T ss_dssp TTHHHHH-SSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH---CTTSEEESSG--GGS-CTTCEEEEE
T ss_pred HHHHhcC-cCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh---CCCcEEEeCC--CCC-CCCceEEEE
Confidence 4556664 3788999999 999999999998877999999999999999744 4689999999 333 347899999
Q ss_pred EcCCCCCch------HHHHhccccCcEEEEEec
Q psy8015 95 VGAAYPRYP------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 95 i~~~~~~~p------~~l~~~LkpgG~lvi~~~ 121 (165)
+....++++ +++.+.|||||++++...
T Consensus 81 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 81 FANSFHDMDDKQHVISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp EESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EccchhcccCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 999888764 467899999999999754
No 122
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.52 E-value=3.9e-14 Score=109.00 Aligned_cols=106 Identities=9% Similarity=-0.055 Sum_probs=83.0
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCC-CCCeEEEEccCCCCCCCCC
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTID-PDHDYDLIADGRASFGDNG 88 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~-~~nV~~~~gD~~~~~~~~~ 88 (165)
...+++..+. .++.+|||+ ||+|.++..+++...+|+++|+++.+++.|+ .+..+ ..|++++.+|+.+.. ..+
T Consensus 55 ~l~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~ 131 (235)
T 3lcc_A 55 LIVHLVDTSS--LPLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTE 131 (235)
T ss_dssp HHHHHHHTTC--SCCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSS
T ss_pred HHHHHHHhcC--CCCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCC
Confidence 3344444432 245699999 9999999999998889999999999999996 33322 357999999997643 456
Q ss_pred CccEEEEcCCCCCch--------HHHHhccccCcEEEEEec
Q psy8015 89 PYDAIHVGAAYPRYP--------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 89 ~fD~I~i~~~~~~~p--------~~l~~~LkpgG~lvi~~~ 121 (165)
+||+|++....++++ +.+.+.|||||++++...
T Consensus 132 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 132 LFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp CEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 899999998887765 357889999999998654
No 123
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=3.6e-14 Score=109.72 Aligned_cols=97 Identities=13% Similarity=0.096 Sum_probs=78.5
Q ss_pred CCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCC-----CCCccEEEEcC
Q psy8015 24 HSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGD-----NGPYDAIHVGA 97 (165)
Q Consensus 24 ~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~-----~~~fD~I~i~~ 97 (165)
..++.+|||+ ||+|.++..+++...+|+++|+|+.+++.|+.+. ...|++++++|+.+.... ..+||+|++..
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKEN-TAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHS-CCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhC-cccCceEEECcccccccccccccccCccEEEEcc
Confidence 3678999999 9999999999998889999999999999997322 345899999998752111 12599999999
Q ss_pred CCCCch--------HHHHhccccCcEEEEEec
Q psy8015 98 AYPRYP--------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 98 ~~~~~p--------~~l~~~LkpgG~lvi~~~ 121 (165)
..++++ .++.+.|||||++++...
T Consensus 133 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 133 GFHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 888776 257899999999887653
No 124
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.52 E-value=9.1e-14 Score=104.36 Aligned_cols=105 Identities=8% Similarity=-0.059 Sum_probs=79.5
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCCC
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNGP 89 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~~ 89 (165)
....++..+ .++ +|||+ ||+|.++..+++...+|+++|+++++++.|+ .+..+. +++++.+|+.+...+.++
T Consensus 20 ~l~~~~~~~---~~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~ 94 (202)
T 2kw5_A 20 FLVSVANQI---PQG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFDIVADA 94 (202)
T ss_dssp SHHHHHHHS---CSS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBSCCTTT
T ss_pred HHHHHHHhC---CCC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcCCCcCC
Confidence 344444443 566 99999 9999999999998789999999999999996 333344 899999998764334578
Q ss_pred ccEEEEcCCCCC------chHHHHhccccCcEEEEEecC
Q psy8015 90 YDAIHVGAAYPR------YPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 90 fD~I~i~~~~~~------~p~~l~~~LkpgG~lvi~~~~ 122 (165)
||+|++...... +...+.+.|||||++++....
T Consensus 95 fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 95 WEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp CSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred ccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 999998532211 113578999999999998643
No 125
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.52 E-value=7.7e-14 Score=110.35 Aligned_cols=94 Identities=12% Similarity=0.097 Sum_probs=77.8
Q ss_pred CCCCeEEEE-ccccHHHHHHh-ccCCcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCCCCCCCccEEEEcCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLP-TFIPNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASFGDNGPYDAIHVGAAY 99 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la-~~~~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~~~~~~fD~I~i~~~~ 99 (165)
.++.+|||| ||+|.++..++ +...+|+++|+|+++++.|+ .+..+. ++++++.+|... ++ ++||+|++....
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~--~~fD~v~~~~~l 139 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ-FD--EPVDRIVSIGAF 139 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG-CC--CCCSEEEEESCG
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh-CC--CCeeEEEEeCch
Confidence 678999999 99999999998 44569999999999999996 455565 479999999854 34 789999999877
Q ss_pred CCch--------HHHHhccccCcEEEEEec
Q psy8015 100 PRYP--------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 100 ~~~p--------~~l~~~LkpgG~lvi~~~ 121 (165)
++++ .++.+.|||||++++...
T Consensus 140 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 140 EHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp GGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred hhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 6652 357899999999998653
No 126
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.51 E-value=5.8e-14 Score=111.43 Aligned_cols=108 Identities=7% Similarity=-0.079 Sum_probs=78.9
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC--CCCCCC
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA--SFGDNG 88 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~--~~~~~~ 88 (165)
.....+++.+. ..++.+|||+ ||+|.++..|++.+.+|+++|+|++|++.|+.+.... .+.....+... .....+
T Consensus 32 ~~~~~il~~l~-l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~~~~~~~~ 109 (261)
T 3iv6_A 32 SDRENDIFLEN-IVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAEIPKELAG 109 (261)
T ss_dssp CHHHHHHHTTT-CCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSCCCGGGTT
T ss_pred HHHHHHHHhcC-CCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhc-cceeeeeecccccccccCC
Confidence 45667777774 4789999999 9999999999999999999999999999997221111 23333333221 111246
Q ss_pred CccEEEEcCCCCCch--------HHHHhccccCcEEEEEecC
Q psy8015 89 PYDAIHVGAAYPRYP--------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 89 ~fD~I~i~~~~~~~p--------~~l~~~LkpgG~lvi~~~~ 122 (165)
+||+|+++...++++ ..+.+.| |||++++.+..
T Consensus 110 ~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 110 HFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred CccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 899999998877543 2466788 99999998764
No 127
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.51 E-value=6.3e-14 Score=106.84 Aligned_cols=96 Identities=13% Similarity=0.021 Sum_probs=79.7
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCC-----CCeEEEEccCCCCCCCCCCccEEEEc
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDP-----DHDYDLIADGRASFGDNGPYDAIHVG 96 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~-----~nV~~~~gD~~~~~~~~~~fD~I~i~ 96 (165)
.++.+|||+ ||+|.++..+++...+|+++|+++.+++.|+ .+..+. .+++++.+|........++||+|++.
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 578999999 9999999999998889999999999999996 444443 36899999987644346789999999
Q ss_pred CCCCCch---------HHHHhccccCcEEEEEe
Q psy8015 97 AAYPRYP---------EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 97 ~~~~~~p---------~~l~~~LkpgG~lvi~~ 120 (165)
...++++ +.+.+.|||||++++..
T Consensus 109 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 109 AFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp SCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 8877654 24679999999999974
No 128
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.51 E-value=1.5e-14 Score=114.71 Aligned_cols=107 Identities=15% Similarity=0.017 Sum_probs=82.5
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccc------cCCCCCeEEEEccCCCCC--
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSS------TIDPDHDYDLIADGRASF-- 84 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~------~~~~~nV~~~~gD~~~~~-- 84 (165)
...+.+.+.. .++.+|||| ||+|..+..+++...+|+++|+|++|++.|+.+ .....++.+..+|.....
T Consensus 46 ~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 124 (293)
T 3thr_A 46 KAWLLGLLRQ-HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKD 124 (293)
T ss_dssp HHHHHHHHHH-TTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHH
T ss_pred HHHHHHHhcc-cCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccc
Confidence 3445555543 678999999 999999999999888999999999999999521 112357899999986532
Q ss_pred -CCCCCccEEEEc-CCCCCchH-------------HHHhccccCcEEEEEec
Q psy8015 85 -GDNGPYDAIHVG-AAYPRYPE-------------IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 85 -~~~~~fD~I~i~-~~~~~~p~-------------~l~~~LkpgG~lvi~~~ 121 (165)
...++||+|++. ...+++++ ++.+.|||||++++.+.
T Consensus 125 ~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 125 VPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp SCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 345789999997 56555433 57899999999998763
No 129
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.51 E-value=7.3e-14 Score=109.16 Aligned_cols=103 Identities=13% Similarity=0.060 Sum_probs=81.7
Q ss_pred HHHHHHHHhcC-CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCcc
Q psy8015 14 VAKYVTYLSGH-SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYD 91 (165)
Q Consensus 14 ~~~~l~~l~~~-~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD 91 (165)
...+.+++... .++.+|||+ ||+|.++..+++...+|+++|+|+++++.|+.+ ..+++++.+|+.+. +..++||
T Consensus 37 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~---~~~~~~~~~d~~~~-~~~~~fD 112 (263)
T 3pfg_A 37 AADLAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRR---NPDAVLHHGDMRDF-SLGRRFS 112 (263)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHH---CTTSEEEECCTTTC-CCSCCEE
T ss_pred HHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhh---CCCCEEEECChHHC-CccCCcC
Confidence 34444444322 457899999 999999999999888999999999999999733 23799999998763 3357899
Q ss_pred EEEEcC-CCCCch---------HHHHhccccCcEEEEEe
Q psy8015 92 AIHVGA-AYPRYP---------EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 92 ~I~i~~-~~~~~p---------~~l~~~LkpgG~lvi~~ 120 (165)
+|++.. ..++++ ..+.+.|||||++++..
T Consensus 113 ~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 113 AVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp EEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred EEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999987 776663 25789999999999953
No 130
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.51 E-value=3.1e-15 Score=112.61 Aligned_cols=86 Identities=12% Similarity=0.086 Sum_probs=54.4
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCC-
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGD- 86 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~- 86 (165)
.+..+++.+....++.+|||+ ||+|.++..+++.. .+|+++|+++++++.|+ ++..+. +++++++|+.+.+++
T Consensus 17 ~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~ 95 (215)
T 4dzr_A 17 LVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIER 95 (215)
T ss_dssp HHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhhh
Confidence 455666666433678999999 99999999999985 48999999999999996 445555 899999998763332
Q ss_pred ---CCCccEEEEcCCC
Q psy8015 87 ---NGPYDAIHVGAAY 99 (165)
Q Consensus 87 ---~~~fD~I~i~~~~ 99 (165)
.++||+|+++...
T Consensus 96 ~~~~~~fD~i~~npp~ 111 (215)
T 4dzr_A 96 AERGRPWHAIVSNPPY 111 (215)
T ss_dssp HHTTCCBSEEEECCCC
T ss_pred hhccCcccEEEECCCC
Confidence 2789999997544
No 131
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.50 E-value=1.3e-14 Score=122.25 Aligned_cols=135 Identities=10% Similarity=-0.034 Sum_probs=98.8
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCC
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNG 88 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~ 88 (165)
.+..++++++....++.+|||+ ||+|.++..+|+...+|+++|+++++++.|+ .+..+++ ++++.+|+.+.++.
T Consensus 276 ~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~-- 352 (425)
T 2jjq_A 276 YQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVK-- 352 (425)
T ss_dssp HHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCT--
T ss_pred HHHHHHHHHhhccCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCcc--
Confidence 3445555555333678999999 9999999999998889999999999999996 4445666 99999999875443
Q ss_pred CccEEEEcCCCCCchH---HHHhccccCcEEEEEecCCCc-eEEEEEEEccCCcEEEEEeeeEEEeeeccC
Q psy8015 89 PYDAIHVGAAYPRYPE---IFIHHLKSGGRLVIPIGDTKQ-QMLTIYDKFHNGTIDIQHWGVVQVGLLYDV 155 (165)
Q Consensus 89 ~fD~I~i~~~~~~~p~---~l~~~LkpgG~lvi~~~~~~~-~~~~~~~k~~~~~~~~~~l~~~~~~pl~~~ 155 (165)
+||+|+++.......+ +....|+|+|++++.+++.+. ..+..+. |....+..+++.|.+..
T Consensus 353 ~fD~Vv~dPPr~g~~~~~~~~l~~l~p~givyvsc~p~tlarDl~~l~------y~l~~~~~~DmFP~T~H 417 (425)
T 2jjq_A 353 GFDTVIVDPPRAGLHPRLVKRLNREKPGVIVYVSCNPETFARDVKMLD------YRIDEIVALDMFPHTPH 417 (425)
T ss_dssp TCSEEEECCCTTCSCHHHHHHHHHHCCSEEEEEESCHHHHHHHHHHSS------CCEEEEEEECCSTTSSC
T ss_pred CCCEEEEcCCccchHHHHHHHHHhcCCCcEEEEECChHHHHhHHhhCe------EEEEEEEEECcCCCCce
Confidence 8999999876544433 234568999999999875432 1111111 66777777777776653
No 132
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.50 E-value=1e-13 Score=104.75 Aligned_cols=101 Identities=13% Similarity=0.007 Sum_probs=79.6
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEE
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIH 94 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~ 94 (165)
+++..+. .++.+|||+ ||+|.++..+ -..+|+++|+++++++.|+.+. .+++++.+|+.+...+.++||+|+
T Consensus 28 ~~l~~~~--~~~~~vLdiG~G~G~~~~~l--~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~~~~~~~~fD~v~ 100 (211)
T 2gs9_A 28 RALKGLL--PPGESLLEVGAGTGYWLRRL--PYPQKVGVEPSEAMLAVGRRRA---PEATWVRAWGEALPFPGESFDVVL 100 (211)
T ss_dssp HHHHTTC--CCCSEEEEETCTTCHHHHHC--CCSEEEEECCCHHHHHHHHHHC---TTSEEECCCTTSCCSCSSCEEEEE
T ss_pred HHHHHhc--CCCCeEEEECCCCCHhHHhC--CCCeEEEEeCCHHHHHHHHHhC---CCcEEEEcccccCCCCCCcEEEEE
Confidence 3444442 378999999 9999999888 2238999999999999997432 679999999876433457899999
Q ss_pred EcCCCCCch------HHHHhccccCcEEEEEecCC
Q psy8015 95 VGAAYPRYP------EIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 95 i~~~~~~~p------~~l~~~LkpgG~lvi~~~~~ 123 (165)
+....++++ .++.+.|||||++++.....
T Consensus 101 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 101 LFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp EESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 999888765 35789999999999987543
No 133
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.50 E-value=7.2e-14 Score=105.19 Aligned_cols=99 Identities=13% Similarity=-0.039 Sum_probs=77.9
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCC-cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCC-
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIP-NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPR- 101 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~-~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~- 101 (165)
.++.+|||+ ||+|.++..+++... +|+++|+++.+++.|+.+..+..+++++.+|+.+...+.++||+|++....+.
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 120 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDAL 120 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhh
Confidence 678999999 999999999998764 89999999999999973222346899999998764333578999998655422
Q ss_pred --------------------chHHHHhccccCcEEEEEecCC
Q psy8015 102 --------------------YPEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 102 --------------------~p~~l~~~LkpgG~lvi~~~~~ 123 (165)
+.+++.+.|||||++++.....
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 121 LAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp TTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 1235789999999999977543
No 134
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.50 E-value=7.7e-15 Score=116.54 Aligned_cols=99 Identities=16% Similarity=0.098 Sum_probs=79.4
Q ss_pred cCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC----CCCCccE
Q psy8015 23 GHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG----DNGPYDA 92 (165)
Q Consensus 23 ~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~----~~~~fD~ 92 (165)
...++++|||+ ||+|..|..++... ++|+++|+++++++.++ +++.|.+|++++.+|+.+... ..++||+
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~ 159 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDK 159 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCE
Confidence 45789999999 99999999999854 68999999999999986 667788899999999865322 1468999
Q ss_pred EEEcCCCC------------------------CchHHHHhccccCcEEEEEec
Q psy8015 93 IHVGAAYP------------------------RYPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 93 I~i~~~~~------------------------~~p~~l~~~LkpgG~lvi~~~ 121 (165)
|+++..+. .+.+.+.+.|||||++++...
T Consensus 160 Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 160 ILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp EEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 99985432 122356789999999999754
No 135
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.49 E-value=1.4e-13 Score=110.64 Aligned_cols=95 Identities=12% Similarity=0.079 Sum_probs=79.2
Q ss_pred CCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCCCCCCccEEEEcCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFGDNGPYDAIHVGAAY 99 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~~~~~fD~I~i~~~~ 99 (165)
.++.+|||| ||+|.++..+++. ..+|+++|+++++++.|+ .+..++. +++++.+|..+. + ++||+|++....
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~--~~fD~v~~~~~l 165 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF-A--EPVDRIVSIEAF 165 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC-C--CCCSEEEEESCG
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC-C--CCcCEEEEeChH
Confidence 688999999 9999999999987 569999999999999996 5555664 599999998653 3 689999999887
Q ss_pred CCch--------HHHHhccccCcEEEEEecC
Q psy8015 100 PRYP--------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 100 ~~~p--------~~l~~~LkpgG~lvi~~~~ 122 (165)
++++ +++.+.|||||++++....
T Consensus 166 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 166 EHFGHENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp GGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred HhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 7663 2578999999999996643
No 136
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.49 E-value=3.8e-14 Score=113.29 Aligned_cols=94 Identities=13% Similarity=0.083 Sum_probs=74.6
Q ss_pred CCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCC------------------------------
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDP------------------------------ 70 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~------------------------------ 70 (165)
++++|||| ||+|.++..+++.. .+|+++|+|+.|++.|+ ++..+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 68999999 99999999999874 69999999999999996 332221
Q ss_pred ----------------------------CCeEEEEccCCCCC-----CCCCCccEEEEcCCCCCc------------hHH
Q psy8015 71 ----------------------------DHDYDLIADGRASF-----GDNGPYDAIHVGAAYPRY------------PEI 105 (165)
Q Consensus 71 ----------------------------~nV~~~~gD~~~~~-----~~~~~fD~I~i~~~~~~~------------p~~ 105 (165)
.||+|+++|..... ...++||+|++.....++ .+.
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 48999999987543 235789999998876433 246
Q ss_pred HHhccccCcEEEEE
Q psy8015 106 FIHHLKSGGRLVIP 119 (165)
Q Consensus 106 l~~~LkpgG~lvi~ 119 (165)
+.+.|||||+|++.
T Consensus 206 ~~~~LkpGG~lil~ 219 (292)
T 3g07_A 206 IYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHEEEEEEEEEE
T ss_pred HHHHhCCCcEEEEe
Confidence 78999999999985
No 137
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.49 E-value=7.8e-14 Score=108.69 Aligned_cols=98 Identities=8% Similarity=0.005 Sum_probs=77.4
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cc------cCCCCCeEEEEccCCCCCC---CCCCc
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SS------TIDPDHDYDLIADGRASFG---DNGPY 90 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~------~~~~~nV~~~~gD~~~~~~---~~~~f 90 (165)
.++.+|||| ||+|.++..||+.. ..|+++|++++|++.|+ ++ ..+..|++++.+|+...++ +.++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 467899999 99999999999875 47999999999999885 22 2467899999999976332 35789
Q ss_pred cEEEEcCCCCC--------------chHHHHhccccCcEEEEEecC
Q psy8015 91 DAIHVGAAYPR--------------YPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 91 D~I~i~~~~~~--------------~p~~l~~~LkpgG~lvi~~~~ 122 (165)
|.|++....+. +.+.+.+.|||||++++....
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 99999765432 335678999999999997654
No 138
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.49 E-value=1.3e-13 Score=101.94 Aligned_cols=98 Identities=14% Similarity=0.050 Sum_probs=76.9
Q ss_pred HHHHHHHHhc-CCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCcc
Q psy8015 14 VAKYVTYLSG-HSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYD 91 (165)
Q Consensus 14 ~~~~l~~l~~-~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD 91 (165)
...+++++.. ..++.+|||+ ||+|.++..+++.. +|+++|+|++|++. ..|++++++|+.+.++ .++||
T Consensus 10 ~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~-------~~~~~~~~~d~~~~~~-~~~fD 80 (170)
T 3q87_B 10 TYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES-------HRGGNLVRADLLCSIN-QESVD 80 (170)
T ss_dssp HHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT-------CSSSCEEECSTTTTBC-GGGCS
T ss_pred HHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc-------ccCCeEEECChhhhcc-cCCCC
Confidence 3445555432 1467899999 99999999999988 99999999999986 3579999999987544 37899
Q ss_pred EEEEcCCCCC---------------chHHHHhccccCcEEEEEec
Q psy8015 92 AIHVGAAYPR---------------YPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 92 ~I~i~~~~~~---------------~p~~l~~~LkpgG~lvi~~~ 121 (165)
+|+++..... +...+.+.| |||++++...
T Consensus 81 ~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~ 124 (170)
T 3q87_B 81 VVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVI 124 (170)
T ss_dssp EEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEE
T ss_pred EEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEe
Confidence 9999866542 124677788 9999999764
No 139
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.48 E-value=1.8e-13 Score=122.75 Aligned_cols=108 Identities=6% Similarity=-0.095 Sum_probs=88.5
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cc------cCCCCCeEEEEcc
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SS------TIDPDHDYDLIAD 79 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~------~~~~~nV~~~~gD 79 (165)
.....+++.+.. .++.+|||| ||+|+++..|++.. .+|+++|++++|++.|+ ++ +.+..|++++++|
T Consensus 708 qRle~LLelL~~-~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGD 786 (950)
T 3htx_A 708 QRVEYALKHIRE-SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGS 786 (950)
T ss_dssp HHHHHHHHHHHH-SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESC
T ss_pred HHHHHHHHHhcc-cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECc
Confidence 345566777754 588999999 99999999999987 69999999999999995 22 3366789999999
Q ss_pred CCCCCCCCCCccEEEEcCCCCCchH--------HHHhccccCcEEEEEec
Q psy8015 80 GRASFGDNGPYDAIHVGAAYPRYPE--------IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 80 ~~~~~~~~~~fD~I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~~ 121 (165)
+.+.....++||+|++....+++++ .+.+.|||| .+++...
T Consensus 787 a~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 787 ILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp TTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred hHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 9875555689999999999988764 458999999 7777654
No 140
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.48 E-value=3.3e-14 Score=119.83 Aligned_cols=137 Identities=10% Similarity=-0.004 Sum_probs=99.5
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCC----
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGD---- 86 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~---- 86 (165)
+..+++++. ..++.+|||+ ||+|.++..||+...+|+++|+|+++++.|+ .+..+++|++|+.+|+.+.++.
T Consensus 275 ~~~~~~~l~-~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~ 353 (433)
T 1uwv_A 275 VARALEWLD-VQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWA 353 (433)
T ss_dssp HHHHHHHHT-CCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGG
T ss_pred HHHHHHhhc-CCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhh
Confidence 445555653 3678999999 9999999999999889999999999999996 5556788999999999774432
Q ss_pred CCCccEEEEcCCCCCchHH--HHhccccCcEEEEEecCCCc-eEEEEEEEccCCcEEEEEeeeEEEeeecc
Q psy8015 87 NGPYDAIHVGAAYPRYPEI--FIHHLKSGGRLVIPIGDTKQ-QMLTIYDKFHNGTIDIQHWGVVQVGLLYD 154 (165)
Q Consensus 87 ~~~fD~I~i~~~~~~~p~~--l~~~LkpgG~lvi~~~~~~~-~~~~~~~k~~~~~~~~~~l~~~~~~pl~~ 154 (165)
.++||+|+++.......+. ....++|++.+++.++..+. ..+..+.+ .+|....+..+++.|.+.
T Consensus 354 ~~~fD~Vv~dPPr~g~~~~~~~l~~~~p~~ivyvsc~p~tlard~~~l~~---~Gy~~~~~~~~d~Fp~t~ 421 (433)
T 1uwv_A 354 KNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLK---AGYTIARLAMLDMFPHTG 421 (433)
T ss_dssp TTCCSEEEECCCTTCCHHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHH---TTCEEEEEEEECCSTTSS
T ss_pred cCCCCEEEECCCCccHHHHHHHHHhcCCCeEEEEECChHHHHhhHHHHHH---CCcEEEEEEEeccCCCCC
Confidence 3579999998766544331 22346899998888875442 22222222 247777777777766554
No 141
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.48 E-value=1.9e-13 Score=105.92 Aligned_cols=95 Identities=12% Similarity=0.007 Sum_probs=75.5
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCC-C
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAY-P 100 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~-~ 100 (165)
.++.+|||+ ||+|..+..+++...+|+++|+|++|++.|+ .+..+. +++++.+|..+. +..++||+|++.... +
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~-~~~~~fD~v~~~~~~~~ 117 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEI-AFKNEFDAVTMFFSTIM 117 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGC-CCCSCEEEEEECSSGGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhc-ccCCCccEEEEcCCchh
Confidence 467899999 9999999999988789999999999999996 444444 799999998763 334689999986432 2
Q ss_pred Cch--------HHHHhccccCcEEEEEec
Q psy8015 101 RYP--------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 101 ~~p--------~~l~~~LkpgG~lvi~~~ 121 (165)
..+ +.+.+.|||||++++.+.
T Consensus 118 ~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 118 YFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 221 356889999999998654
No 142
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.48 E-value=1.4e-13 Score=107.97 Aligned_cols=109 Identities=7% Similarity=-0.043 Sum_probs=82.1
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHH------HHHhcc--cccCCC-CCeEEEEc
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYY------LSGGPL--SSTIDP-DHDYDLIA 78 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~------~~~~A~--~~~~~~-~nV~~~~g 78 (165)
....++++.+. ..++.+|||| ||+|+++..+++.. .+|+++|++++ +++.|+ ++..+. +|++++.+
T Consensus 30 ~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~ 108 (275)
T 3bkx_A 30 AHRLAIAEAWQ-VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFN 108 (275)
T ss_dssp HHHHHHHHHHT-CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECS
T ss_pred HHHHHHHHHcC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEEC
Confidence 34456667664 4789999999 99999999999875 68999999997 899886 555555 57999999
Q ss_pred c---CCCCCCCCCCccEEEEcCCCCCchH------HHHhccccCcEEEEEec
Q psy8015 79 D---GRASFGDNGPYDAIHVGAAYPRYPE------IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 79 D---~~~~~~~~~~fD~I~i~~~~~~~p~------~l~~~LkpgG~lvi~~~ 121 (165)
| ......+.++||+|++....+++++ .+..+++|||++++...
T Consensus 109 d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 109 TNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp CCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred ChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 8 2221113478999999988876652 33455566999999653
No 143
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.48 E-value=1.7e-13 Score=109.55 Aligned_cols=109 Identities=12% Similarity=0.080 Sum_probs=85.0
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCCCCCC
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRASFGD 86 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~~~~~ 86 (165)
..+..+++++.. .++.+|||+ ||+|.++..+++. ..+|+++|+|+++++.|+ .+..+++| ++++++|..+..+
T Consensus 110 ~lv~~~l~~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~- 187 (284)
T 1nv8_A 110 ELVELALELIRK-YGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK- 187 (284)
T ss_dssp HHHHHHHHHHHH-HTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG-
T ss_pred HHHHHHHHHhcc-cCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc-
Confidence 445566666642 467899999 9999999999988 568999999999999996 56677775 9999999977443
Q ss_pred CCCc---cEEEEcCCCC-----------C--------------chHHHH-hccccCcEEEEEecCC
Q psy8015 87 NGPY---DAIHVGAAYP-----------R--------------YPEIFI-HHLKSGGRLVIPIGDT 123 (165)
Q Consensus 87 ~~~f---D~I~i~~~~~-----------~--------------~p~~l~-~~LkpgG~lvi~~~~~ 123 (165)
++| |+|+++..+. + +-..+. +.|+|||++++.++..
T Consensus 188 -~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~ 252 (284)
T 1nv8_A 188 -EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED 252 (284)
T ss_dssp -GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT
T ss_pred -cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 478 9999973321 1 123577 9999999999988754
No 144
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.48 E-value=2.1e-13 Score=104.68 Aligned_cols=94 Identities=13% Similarity=0.072 Sum_probs=75.9
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCCCccEEEEcC-CCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNGPYDAIHVGA-AYP 100 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~-~~~ 100 (165)
.++.+|||+ ||+|.++..+++. .+|+++|+++++++.|+ .+..+ .+++++.+|..+... .++||+|++.. ..+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~-~~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELEL-PEPVDAITILCDSLN 108 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCCC-SSCEEEEEECTTGGG
T ss_pred CCCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcCC-CCCcCEEEEeCCchh
Confidence 567999999 9999999999988 89999999999999996 33334 579999999876433 37899999975 555
Q ss_pred Cch---------HHHHhccccCcEEEEEec
Q psy8015 101 RYP---------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 101 ~~p---------~~l~~~LkpgG~lvi~~~ 121 (165)
+++ ..+.+.|||||++++.+.
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 441 356789999999998654
No 145
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.47 E-value=9.4e-14 Score=111.28 Aligned_cols=97 Identities=14% Similarity=-0.028 Sum_probs=79.3
Q ss_pred CCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCCCCCCCCCccEEEEc
Q psy8015 24 HSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRASFGDNGPYDAIHVG 96 (165)
Q Consensus 24 ~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~~~~~~~~fD~I~i~ 96 (165)
..++.+|||| ||+|..+..++.. ..+|+++|+++.+++.|+ .+..+..+ ++++.+|+.+...+ ++||+|++.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~ 194 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSN 194 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEEC
Confidence 3789999999 9999999999632 358999999999999996 55666654 99999999774333 899999998
Q ss_pred CCCCCch---------HHHHhccccCcEEEEEec
Q psy8015 97 AAYPRYP---------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 97 ~~~~~~p---------~~l~~~LkpgG~lvi~~~ 121 (165)
...++++ +++.+.|||||++++...
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 8776553 356789999999999763
No 146
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.47 E-value=4.5e-14 Score=110.95 Aligned_cols=113 Identities=13% Similarity=0.085 Sum_probs=82.6
Q ss_pred EEecCCchHH--HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEc
Q psy8015 4 VFVSGSVSGA--VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIA 78 (165)
Q Consensus 4 ~~~~~~~~~~--~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~g 78 (165)
.|+++.-+.. ..++++.. ..++.+|||+ ||+|.++..+++...+|+++|+|+.+++.|+ .+..+.+ ++++.+
T Consensus 98 ~fgtg~~~tt~~~~~~l~~~--~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~ 174 (254)
T 2nxc_A 98 AFGTGHHETTRLALKALARH--LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVR-PRFLEG 174 (254)
T ss_dssp ----CCSHHHHHHHHHHHHH--CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCC-CEEEES
T ss_pred cccCCCCHHHHHHHHHHHHh--cCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCc-EEEEEC
Confidence 3666664433 22333333 3678999999 9999999999988779999999999999996 4445555 999999
Q ss_pred cCCCCCCCCCCccEEEEcCCCCC---chHHHHhccccCcEEEEEe
Q psy8015 79 DGRASFGDNGPYDAIHVGAAYPR---YPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 79 D~~~~~~~~~~fD~I~i~~~~~~---~p~~l~~~LkpgG~lvi~~ 120 (165)
|..+.++ .++||+|+++...+. +.+.+.+.|||||++++..
T Consensus 175 d~~~~~~-~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 175 SLEAALP-FGPFDLLVANLYAELHAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp CHHHHGG-GCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChhhcCc-CCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 9866433 468999998754433 3356789999999999853
No 147
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.47 E-value=7.4e-14 Score=115.36 Aligned_cols=136 Identities=9% Similarity=-0.029 Sum_probs=100.6
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC---CCC
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF---GDN 87 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~---~~~ 87 (165)
...+++++. ..+.+|||+ ||+|.++..+|+.+.+|+++|+++++++.|+ ++..|++|++++.+|+.+.+ ...
T Consensus 203 ~~~~~~~~~--~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~ 280 (369)
T 3bt7_A 203 LEWALDVTK--GSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGV 280 (369)
T ss_dssp HHHHHHHTT--TCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSC
T ss_pred HHHHHHHhh--cCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhc
Confidence 444455543 236899999 9999999999998899999999999999996 56667889999999986532 111
Q ss_pred -------------CCccEEEEcCCCCCchHHHHhccccCcEEEEEecCCC-c-eEEEEEEEccCCcEEEEEeeeEEEeee
Q psy8015 88 -------------GPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIGDTK-Q-QMLTIYDKFHNGTIDIQHWGVVQVGLL 152 (165)
Q Consensus 88 -------------~~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~~~~~~-~-~~~~~~~k~~~~~~~~~~l~~~~~~pl 152 (165)
.+||+|+++.....+.+.+.+.|+++|+++....... . ..+..+. . .|....+..+++.|.
T Consensus 281 ~~~~~l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~~l~~~g~ivyvsc~p~t~ard~~~l~---~-~y~~~~~~~~D~FP~ 356 (369)
T 3bt7_A 281 REFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLS---Q-THKVERLALFDQFPY 356 (369)
T ss_dssp CCCTTGGGSCGGGCCEEEEEECCCTTCCCHHHHHHHTTSSEEEEEESCHHHHHHHHHHHH---H-HEEEEEEEEECCSTT
T ss_pred cccccccccccccCCCCEEEECcCccccHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHh---h-CcEEEEEEeeccCCC
Confidence 3799999988776677778899999999888654321 1 1222221 1 388888888887777
Q ss_pred ccC
Q psy8015 153 YDV 155 (165)
Q Consensus 153 ~~~ 155 (165)
+.+
T Consensus 357 T~H 359 (369)
T 3bt7_A 357 THH 359 (369)
T ss_dssp SSC
T ss_pred CCc
Confidence 653
No 148
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.47 E-value=2.2e-13 Score=107.38 Aligned_cols=107 Identities=9% Similarity=-0.004 Sum_probs=80.9
Q ss_pred HHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--ccc---CCCC-CeEEEEccCCCCC---
Q psy8015 17 YVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SST---IDPD-HDYDLIADGRASF--- 84 (165)
Q Consensus 17 ~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~---~~~~-nV~~~~gD~~~~~--- 84 (165)
++.......++.+|||+ ||+|.++..+++.. .+|+++|+++++++.|+ ++. .++. +++++++|..+..
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~ 106 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKAR 106 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHH
T ss_pred HHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhh
Confidence 34433334678899999 99999999999876 58999999999999996 555 5665 5999999987641
Q ss_pred ----CCCCCccEEEEcCCCCC------------------------chHHHHhccccCcEEEEEecCC
Q psy8015 85 ----GDNGPYDAIHVGAAYPR------------------------YPEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 85 ----~~~~~fD~I~i~~~~~~------------------------~p~~l~~~LkpgG~lvi~~~~~ 123 (165)
...++||+|+++..+.. +.+.+.+.|||||++++..+..
T Consensus 107 ~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 173 (260)
T 2ozv_A 107 VEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ 173 (260)
T ss_dssp HHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred hhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH
Confidence 12468999999843321 1234578999999999987643
No 149
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.47 E-value=4.8e-14 Score=120.50 Aligned_cols=99 Identities=15% Similarity=0.046 Sum_probs=79.0
Q ss_pred cCC--CCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC-CCCCccEE
Q psy8015 23 GHS--KRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG-DNGPYDAI 93 (165)
Q Consensus 23 ~~~--~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~-~~~~fD~I 93 (165)
... ++++|||+ ||+|..|..+|... ++|+++|+++++++.++ ++++|+.|++++++|+..... ..+.||+|
T Consensus 112 ~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~I 191 (479)
T 2frx_A 112 FADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAI 191 (479)
T ss_dssp TTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEE
T ss_pred CcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEE
Confidence 346 89999999 99999999999875 68999999999999996 667788899999999875321 24689999
Q ss_pred EEcCCCC------Cc----------------------hHHHHhccccCcEEEEEec
Q psy8015 94 HVGAAYP------RY----------------------PEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 94 ~i~~~~~------~~----------------------p~~l~~~LkpgG~lvi~~~ 121 (165)
++++.+. .. .+.+.+.|||||+|+....
T Consensus 192 l~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 192 LLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp EEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 9975542 11 1235689999999998653
No 150
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.47 E-value=1.1e-13 Score=109.43 Aligned_cols=108 Identities=16% Similarity=0.067 Sum_probs=83.5
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCC
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDN 87 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~ 87 (165)
.+..+++.+. .++.+|||+ ||+|..+..+++. ..+|+++|+|+++++.|+ .+..+.+|++++++|..+..+ .
T Consensus 98 l~~~~l~~~~--~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~-~ 174 (276)
T 2b3t_A 98 LVEQALARLP--EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA-G 174 (276)
T ss_dssp HHHHHHHHSC--SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT-T
T ss_pred HHHHHHHhcc--cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc-c
Confidence 3445555542 567899999 9999999999976 358999999999999996 555677789999999877543 4
Q ss_pred CCccEEEEcCCCCC-------------------------------chHHHHhccccCcEEEEEecCC
Q psy8015 88 GPYDAIHVGAAYPR-------------------------------YPEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 88 ~~fD~I~i~~~~~~-------------------------------~p~~l~~~LkpgG~lvi~~~~~ 123 (165)
++||+|+++..+.. +.+.+.+.|+|||++++..+..
T Consensus 175 ~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 241 (276)
T 2b3t_A 175 QQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ 241 (276)
T ss_dssp CCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS
T ss_pred CCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch
Confidence 68999999843311 1135678999999999987644
No 151
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.47 E-value=5.3e-13 Score=98.65 Aligned_cols=104 Identities=13% Similarity=0.065 Sum_probs=82.4
Q ss_pred HHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEE
Q psy8015 15 AKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAI 93 (165)
Q Consensus 15 ~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I 93 (165)
.++++.+. .++.+|||+ ||+|.++..+++...+|+++|+++++++.|+.+ ..+++++.+|..+...+.++||+|
T Consensus 37 ~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~---~~~~~~~~~d~~~~~~~~~~~D~i 111 (195)
T 3cgg_A 37 ARLIDAMA--PRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQD---FPEARWVVGDLSVDQISETDFDLI 111 (195)
T ss_dssp HHHHHHHS--CTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CTTSEEEECCTTTSCCCCCCEEEE
T ss_pred HHHHHHhc--cCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHh---CCCCcEEEcccccCCCCCCceeEE
Confidence 45666663 688999999 999999999998888999999999999999732 246999999987643335789999
Q ss_pred EEcC-CCCCch--------HHHHhccccCcEEEEEecCC
Q psy8015 94 HVGA-AYPRYP--------EIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 94 ~i~~-~~~~~p--------~~l~~~LkpgG~lvi~~~~~ 123 (165)
++.+ ..++++ +.+.+.|+|||++++.....
T Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 112 VSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp EECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred EECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 9984 444432 35689999999999987654
No 152
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.47 E-value=1.1e-13 Score=106.05 Aligned_cols=110 Identities=15% Similarity=0.073 Sum_probs=81.9
Q ss_pred chHHHHHHHHHHhc--CCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCC
Q psy8015 10 VSGAVAKYVTYLSG--HSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGR 81 (165)
Q Consensus 10 ~~~~~~~~l~~l~~--~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~ 81 (165)
-+...+.++..+.. ..++++|||+ ||+|.++..+++.. ++|+++|+++++++.++ .+. .+|++++.+|+.
T Consensus 55 ~~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~--~~~v~~~~~d~~ 132 (227)
T 1g8a_A 55 RSKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE--RRNIVPILGDAT 132 (227)
T ss_dssp TCHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS--CTTEEEEECCTT
T ss_pred chhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc--cCCCEEEEccCC
Confidence 34444555333321 3678999999 99999999999763 68999999999998885 332 268999999987
Q ss_pred CCC---CCCCCccEEEEcCCCCCc----hHHHHhccccCcEEEEEec
Q psy8015 82 ASF---GDNGPYDAIHVGAAYPRY----PEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 82 ~~~---~~~~~fD~I~i~~~~~~~----p~~l~~~LkpgG~lvi~~~ 121 (165)
+.. +..++||+|+++...+.. ...+.+.|||||++++...
T Consensus 133 ~~~~~~~~~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 179 (227)
T 1g8a_A 133 KPEEYRALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAVK 179 (227)
T ss_dssp CGGGGTTTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcchhhcccCCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 621 123589999998764433 3457899999999999753
No 153
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.46 E-value=2e-13 Score=103.42 Aligned_cols=102 Identities=16% Similarity=0.040 Sum_probs=81.2
Q ss_pred HHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC----CCCCCC
Q psy8015 15 AKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS----FGDNGP 89 (165)
Q Consensus 15 ~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~----~~~~~~ 89 (165)
..+++.+.. .++.+|||+ ||+|.++..+++...+|+++|+++.+++.|+.+ .+++++.+|.... .....+
T Consensus 42 ~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~ 116 (227)
T 3e8s_A 42 QAILLAILG-RQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA----GAGEVHLASYAQLAEAKVPVGKD 116 (227)
T ss_dssp HHHHHHHHH-TCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT----CSSCEEECCHHHHHTTCSCCCCC
T ss_pred HHHHHHhhc-CCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh----cccccchhhHHhhcccccccCCC
Confidence 456666654 577999999 999999999999888999999999999999743 4678888886542 233456
Q ss_pred ccEEEEcCCCCC-----chHHHHhccccCcEEEEEec
Q psy8015 90 YDAIHVGAAYPR-----YPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 90 fD~I~i~~~~~~-----~p~~l~~~LkpgG~lvi~~~ 121 (165)
||+|++....+. +...+.+.|||||++++...
T Consensus 117 fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 117 YDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp EEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 999999887761 22467899999999999765
No 154
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.46 E-value=3.1e-13 Score=108.76 Aligned_cols=97 Identities=15% Similarity=0.109 Sum_probs=74.1
Q ss_pred CCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc--ccc-----CCCCCeEEEEccCCCCCCC-CCCccEE
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL--SST-----IDPDHDYDLIADGRASFGD-NGPYDAI 93 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~--~~~-----~~~~nV~~~~gD~~~~~~~-~~~fD~I 93 (165)
.+.++|||| ||+|.++..+++. ..+|+++|+|+++++.|+ +.. ++.++++++.+|+.+.+.. .++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 567899999 9999999999987 468999999999999996 332 2345899999999765432 4789999
Q ss_pred EEcCCCCCch----------HHHHhccccCcEEEEEec
Q psy8015 94 HVGAAYPRYP----------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 94 ~i~~~~~~~p----------~~l~~~LkpgG~lvi~~~ 121 (165)
+++...+..| +.+.+.|+|||++++..+
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 9987654322 357899999999999764
No 155
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.46 E-value=4.1e-13 Score=106.03 Aligned_cols=98 Identities=9% Similarity=0.089 Sum_probs=79.3
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCC-cEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCCC-CCCCccEEEEcCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIP-NSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASFG-DNGPYDAIHVGAA 98 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~-~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~~-~~~~fD~I~i~~~ 98 (165)
.++.+|||+ ||+|..+..+++... +|+++|+++++++.|+ .+..+. .+++++.+|+.+... ..++||+|++...
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 688999999 999999998888754 8999999999999996 444454 469999999876422 4578999999887
Q ss_pred CCC----ch------HHHHhccccCcEEEEEecC
Q psy8015 99 YPR----YP------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 99 ~~~----~p------~~l~~~LkpgG~lvi~~~~ 122 (165)
.++ .+ ..+.+.|||||++++....
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 754 22 3578999999999998754
No 156
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.45 E-value=6.3e-14 Score=114.59 Aligned_cols=111 Identities=10% Similarity=-0.054 Sum_probs=82.8
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCC--eEEEEccCCCCCCC
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDH--DYDLIADGRASFGD 86 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~n--V~~~~gD~~~~~~~ 86 (165)
.....+.+.+....++.+|||+ ||+|.++..+++...+|+++|+|+++++.|+ ++..++++ ++++++|+.+..+.
T Consensus 139 ~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~ 218 (332)
T 2igt_A 139 VHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQR 218 (332)
T ss_dssp HHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHH
Confidence 3344566666422567899999 9999999999987679999999999999996 45556664 99999998653321
Q ss_pred ----CCCccEEEEcCCC-C---------------CchHHHHhccccCcEEEEEecC
Q psy8015 87 ----NGPYDAIHVGAAY-P---------------RYPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 87 ----~~~fD~I~i~~~~-~---------------~~p~~l~~~LkpgG~lvi~~~~ 122 (165)
..+||+|+++... . .+...+.+.|+|||++++.+..
T Consensus 219 ~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 219 EERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred HHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 3589999997542 1 1123467899999998876643
No 157
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.45 E-value=6.8e-13 Score=103.94 Aligned_cols=94 Identities=15% Similarity=0.068 Sum_probs=77.5
Q ss_pred CCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPR 101 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~ 101 (165)
.++.+|||+ ||+|.++..+++. ..+|+++|+++++++.|+.+ ..+++++.+|+.+.....++||+|++... +.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-~~ 159 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKR---YPQVTFCVASSHRLPFSDTSMDAIIRIYA-PC 159 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHH---CTTSEEEECCTTSCSBCTTCEEEEEEESC-CC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHh---CCCcEEEEcchhhCCCCCCceeEEEEeCC-hh
Confidence 578999999 9999999999987 46899999999999999633 25789999998653334578999998665 45
Q ss_pred chHHHHhccccCcEEEEEecC
Q psy8015 102 YPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 102 ~p~~l~~~LkpgG~lvi~~~~ 122 (165)
..+++.+.|||||++++....
T Consensus 160 ~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 160 KAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp CHHHHHHHEEEEEEEEEEEEC
T ss_pred hHHHHHHhcCCCcEEEEEEcC
Confidence 567889999999999998754
No 158
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.45 E-value=2e-13 Score=106.37 Aligned_cols=98 Identities=9% Similarity=0.036 Sum_probs=78.2
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccC--------CCCCeEEEEccCCCCCC---CCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTI--------DPDHDYDLIADGRASFG---DNG 88 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~--------~~~nV~~~~gD~~~~~~---~~~ 88 (165)
.++.+|||| ||+|.++..+++.. .+|+++|+++.+++.|+ ++.. +++|++++.+|+.+.++ +.+
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 467899999 99999999999876 37999999999999985 3332 67899999999876332 357
Q ss_pred CccEEEEcCCCCC--------------chHHHHhccccCcEEEEEecC
Q psy8015 89 PYDAIHVGAAYPR--------------YPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 89 ~fD~I~i~~~~~~--------------~p~~l~~~LkpgG~lvi~~~~ 122 (165)
.||.|++....+. +...+.+.|+|||++++....
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 8999998755442 345678999999999997543
No 159
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.44 E-value=2e-13 Score=115.54 Aligned_cols=109 Identities=14% Similarity=0.126 Sum_probs=83.6
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC-
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG- 85 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~- 85 (165)
....+...+....++++|||+ ||+|..|..++... ++|+++|+++.+++.++ ++++|.+|++++++|+....+
T Consensus 246 ~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~ 325 (450)
T 2yxl_A 246 EASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI 325 (450)
T ss_dssp HHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS
T ss_pred chhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh
Confidence 333444443345889999999 99999999999875 58999999999999986 677788899999999876432
Q ss_pred -CCCCccEEEEcCCCC------C----------------------chHHHHhccccCcEEEEEec
Q psy8015 86 -DNGPYDAIHVGAAYP------R----------------------YPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 86 -~~~~fD~I~i~~~~~------~----------------------~p~~l~~~LkpgG~lvi~~~ 121 (165)
+.++||+|+++..+. . +.+.+.+.|||||++++...
T Consensus 326 ~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 326 IGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp SCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred hccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 126799999975432 1 12346789999999998654
No 160
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.44 E-value=1.6e-13 Score=105.81 Aligned_cols=111 Identities=15% Similarity=0.137 Sum_probs=80.8
Q ss_pred chHHHHHHHHHHh--cCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCC
Q psy8015 10 VSGAVAKYVTYLS--GHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGR 81 (165)
Q Consensus 10 ~~~~~~~~l~~l~--~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~ 81 (165)
++...+.+...+. ...++.+|||+ ||+|.++..+++.. ++|+++|+++++++.+. .+.. .|++++.+|+.
T Consensus 59 ~~~~~~~~~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~ 136 (233)
T 2ipx_A 59 RSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDAR 136 (233)
T ss_dssp TCHHHHHHHTTCSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTT
T ss_pred chhHHHHHHhHHheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccC
Confidence 4444445543232 23678999999 99999999999874 68999999988776653 2221 68999999987
Q ss_pred CC--CC-CCCCccEEEEcCCCCCc----hHHHHhccccCcEEEEEecC
Q psy8015 82 AS--FG-DNGPYDAIHVGAAYPRY----PEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 82 ~~--~~-~~~~fD~I~i~~~~~~~----p~~l~~~LkpgG~lvi~~~~ 122 (165)
+. ++ ..++||+|+++...+.. ...+.+.|||||++++.+..
T Consensus 137 ~~~~~~~~~~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 137 HPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp CGGGGGGGCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ChhhhcccCCcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 63 12 24689999997764432 23578899999999997653
No 161
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.44 E-value=2.7e-13 Score=108.47 Aligned_cols=107 Identities=9% Similarity=-0.024 Sum_probs=84.8
Q ss_pred CchHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCCC
Q psy8015 9 SVSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRAS 83 (165)
Q Consensus 9 ~~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~~ 83 (165)
.......++.+++ ++|++|||+ ||+|++|..+|+.. .+|+++|+||.+++.++ ++..++++ ++++++|+.+.
T Consensus 111 ~~~~er~ri~~~~---~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~ 187 (278)
T 3k6r_A 111 ANVKERVRMAKVA---KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF 187 (278)
T ss_dssp GGHHHHHHHHHHC---CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC
T ss_pred CcHHHHHHHHHhc---CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHh
Confidence 3555566776664 689999999 99999999999876 58999999999999996 66667765 99999999764
Q ss_pred CCCCCCccEEEEcCCCC--CchHHHHhccccCcEEEEE
Q psy8015 84 FGDNGPYDAIHVGAAYP--RYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 84 ~~~~~~fD~I~i~~~~~--~~p~~l~~~LkpgG~lvi~ 119 (165)
...+.||.|+++.... ..-+...+.|||||.+.+-
T Consensus 188 -~~~~~~D~Vi~~~p~~~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 188 -PGENIADRILMGYVVRTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp -CCCSCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEE
T ss_pred -ccccCCCEEEECCCCcHHHHHHHHHHHcCCCCEEEEE
Confidence 4457899999975432 3335667999999998653
No 162
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.44 E-value=2.4e-13 Score=112.66 Aligned_cols=96 Identities=8% Similarity=-0.040 Sum_probs=78.5
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--ccc--------CCCCCeEEEEccCCCC------C
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SST--------IDPDHDYDLIADGRAS------F 84 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~--------~~~~nV~~~~gD~~~~------~ 84 (165)
.++.+|||+ ||+|..+..+++.. .+|+++|+++++++.|+ ++. ....|++++.+|+.+. .
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 478999999 99999999999864 48999999999999996 221 3336899999998763 2
Q ss_pred CCCCCccEEEEcCCCCCch------HHHHhccccCcEEEEEe
Q psy8015 85 GDNGPYDAIHVGAAYPRYP------EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 85 ~~~~~fD~I~i~~~~~~~p------~~l~~~LkpgG~lvi~~ 120 (165)
.+.++||+|+++...++++ .++.+.|||||++++..
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 3357899999998877654 46789999999999964
No 163
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.43 E-value=2.3e-13 Score=114.25 Aligned_cols=108 Identities=11% Similarity=-0.016 Sum_probs=83.5
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhccc---------ccCCC--CCeEE
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPLS---------STIDP--DHDYD 75 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~~---------~~~~~--~nV~~ 75 (165)
.+..+.++++.+. +.++++|||| ||+|.++..+|... .+|+++|+++++++.|+. +..|+ .+|+|
T Consensus 158 ~~~~i~~il~~l~-l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVef 236 (438)
T 3uwp_A 158 SFDLVAQMIDEIK-MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTL 236 (438)
T ss_dssp HHHHHHHHHHHHC-CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEE
T ss_pred CHHHHHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Confidence 4566788888884 5899999999 99999999998754 369999999999999851 22354 58999
Q ss_pred EEccCCCCCCCC--CCccEEEEcCCCCCch------HHHHhccccCcEEEEE
Q psy8015 76 LIADGRASFGDN--GPYDAIHVGAAYPRYP------EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 76 ~~gD~~~~~~~~--~~fD~I~i~~~~~~~p------~~l~~~LkpgG~lvi~ 119 (165)
++||+.+..... ..||+||++.... .+ .++++.|||||++|+.
T Consensus 237 i~GD~~~lp~~d~~~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 237 ERGDFLSEEWRERIANTSVIFVNNFAF-GPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp EECCTTSHHHHHHHHTCSEEEECCTTC-CHHHHHHHHHHHTTSCTTCEEEES
T ss_pred EECcccCCccccccCCccEEEEccccc-CchHHHHHHHHHHcCCCCcEEEEe
Confidence 999987632111 4799999976542 22 2568999999999985
No 164
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.43 E-value=6.7e-14 Score=109.07 Aligned_cols=94 Identities=9% Similarity=-0.077 Sum_probs=72.2
Q ss_pred CCCeEEEE-ccccHHHHHHhcc----CCcEEEEeCCHHHHHhcc--cccC---CCCC-----------------------
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTF----IPNSFNINVYYYLSGGPL--SSTI---DPDH----------------------- 72 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~--~~~~---~~~n----------------------- 72 (165)
++.+|||+ ||+|.++..+++. ..+|+++|+|+++++.|+ ++.. ++.+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 57899999 9999999999986 358999999999999997 3333 3322
Q ss_pred ---eE-------------EEEccCCCCCC-----CCCCccEEEEcCCCC---------------CchHHHHhccccCcEE
Q psy8015 73 ---DY-------------DLIADGRASFG-----DNGPYDAIHVGAAYP---------------RYPEIFIHHLKSGGRL 116 (165)
Q Consensus 73 ---V~-------------~~~gD~~~~~~-----~~~~fD~I~i~~~~~---------------~~p~~l~~~LkpgG~l 116 (165)
++ ++++|..+..+ ...+||+|+++.... .+.+.+.+.|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 67 99999876542 334899999975332 1224578999999999
Q ss_pred EEE
Q psy8015 117 VIP 119 (165)
Q Consensus 117 vi~ 119 (165)
++.
T Consensus 211 ~~~ 213 (250)
T 1o9g_A 211 AVT 213 (250)
T ss_dssp EEE
T ss_pred EEe
Confidence 983
No 165
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.42 E-value=1e-12 Score=104.55 Aligned_cols=110 Identities=13% Similarity=0.065 Sum_probs=82.8
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccc---cHHHHHHhccC--CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC---
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSN---TKQSTTLPTFI--PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--- 83 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~Gs---G~~t~~la~~~--~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--- 83 (165)
...++++.+....+..+|||| ||+ |.++..+++.. .+|+++|+|+.|++.||.+.....+++++.+|..+.
T Consensus 64 ~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~ 143 (274)
T 2qe6_A 64 VLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYI 143 (274)
T ss_dssp HHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHH
T ss_pred HHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhh
Confidence 345666666522355899999 999 98887776653 589999999999999973222346899999998641
Q ss_pred --------CCCCCCccEEEEcCCCCCchH--------HHHhccccCcEEEEEecC
Q psy8015 84 --------FGDNGPYDAIHVGAAYPRYPE--------IFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 84 --------~~~~~~fD~I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~~~ 122 (165)
..+..+||+|++....+++++ ++.+.|+|||+|++....
T Consensus 144 ~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 144 LNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred hccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 112247999999988887653 578999999999997754
No 166
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.42 E-value=2.1e-13 Score=111.43 Aligned_cols=114 Identities=13% Similarity=0.087 Sum_probs=88.7
Q ss_pred EecCCchHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEcc
Q psy8015 5 FVSGSVSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIAD 79 (165)
Q Consensus 5 ~~~~~~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD 79 (165)
|+.+..+.....+++.+.. .++.+|||+ ||+|.++..+++.. .+|+++|+|+.+++.|+ .+..+. +++++.+|
T Consensus 176 f~~~~~d~~~~~ll~~l~~-~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~-~~~~~~~d 253 (343)
T 2pjd_A 176 FSRDGLDVGSQLLLSTLTP-HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV-EGEVFASN 253 (343)
T ss_dssp TTSSSCCHHHHHHHHHSCT-TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC-CCEEEECS
T ss_pred cCCCCCcHHHHHHHHhcCc-CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-CCEEEEcc
Confidence 4444455567778887743 567899999 99999999999876 48999999999999996 444454 37889999
Q ss_pred CCCCCCCCCCccEEEEcCCCCC-----------chHHHHhccccCcEEEEEecC
Q psy8015 80 GRASFGDNGPYDAIHVGAAYPR-----------YPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 80 ~~~~~~~~~~fD~I~i~~~~~~-----------~p~~l~~~LkpgG~lvi~~~~ 122 (165)
..... .++||+|+++...+. +..++.+.|||||++++....
T Consensus 254 ~~~~~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 254 VFSEV--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp TTTTC--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred ccccc--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 86533 468999999887764 123578999999999998764
No 167
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.42 E-value=6.5e-13 Score=103.92 Aligned_cols=101 Identities=12% Similarity=0.033 Sum_probs=76.9
Q ss_pred HHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEE
Q psy8015 15 AKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAI 93 (165)
Q Consensus 15 ~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I 93 (165)
.+++..+. .++.+|||+ ||+|.++..+++...+|+++|+|++|++.|+.+.. .+ ++.+|+.+...+.++||+|
T Consensus 45 ~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~--~~--~~~~d~~~~~~~~~~fD~v 118 (260)
T 2avn_A 45 GSFLEEYL--KNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV--KN--VVEAKAEDLPFPSGAFEAV 118 (260)
T ss_dssp HHHHHHHC--CSCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC--SC--EEECCTTSCCSCTTCEEEE
T ss_pred HHHHHHhc--CCCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC--CC--EEECcHHHCCCCCCCEEEE
Confidence 34444442 378999999 99999999999988899999999999999973321 23 8889987643345789999
Q ss_pred EEcCCCCCc---h----HHHHhccccCcEEEEEec
Q psy8015 94 HVGAAYPRY---P----EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 94 ~i~~~~~~~---p----~~l~~~LkpgG~lvi~~~ 121 (165)
++.....++ + .++.+.|||||++++...
T Consensus 119 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 119 LALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp EECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 997644322 2 467899999999998764
No 168
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.42 E-value=5.8e-13 Score=99.84 Aligned_cols=101 Identities=13% Similarity=0.038 Sum_probs=74.6
Q ss_pred HHHHHHHHHhc---CCCCCeEEEE-ccccHHHHHHhccC----CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCC
Q psy8015 13 AVAKYVTYLSG---HSKRLDCLAL-TSNTKQSTTLPTFI----PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASF 84 (165)
Q Consensus 13 ~~~~~l~~l~~---~~~~~~vLei-~GsG~~t~~la~~~----~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~ 84 (165)
..-++++++.. ..++.+|||+ ||+|.++..+++.. .+|+++|+++. + ..++++++++|..+..
T Consensus 6 ~~~kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~----~-----~~~~v~~~~~d~~~~~ 76 (201)
T 2plw_A 6 AAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM----D-----PIPNVYFIQGEIGKDN 76 (201)
T ss_dssp THHHHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC----C-----CCTTCEEEECCTTTTS
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc----C-----CCCCceEEEccccchh
Confidence 33455554432 3688999999 99999999999874 58999999993 1 2357999999986542
Q ss_pred -------------------------CCCCCccEEEEcCCCCCc-----------------hHHHHhccccCcEEEEEecC
Q psy8015 85 -------------------------GDNGPYDAIHVGAAYPRY-----------------PEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 85 -------------------------~~~~~fD~I~i~~~~~~~-----------------p~~l~~~LkpgG~lvi~~~~ 122 (165)
.+.++||+|+++...+.. ...+.+.|||||++++.+..
T Consensus 77 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 77 MNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp SCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 134689999998776541 22467899999999986543
No 169
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.42 E-value=5.6e-13 Score=102.09 Aligned_cols=92 Identities=11% Similarity=0.034 Sum_probs=74.9
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcC-CCCCc
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGA-AYPRY 102 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~-~~~~~ 102 (165)
.++.+|||+ ||+|.++..+++...+|+++|++++|++.|+.+ .++++++.+|..+.. ..++||+|++.. ..+++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~---~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~~~ 114 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKR---LPDATLHQGDMRDFR-LGRKFSAVVSMFSSVGYL 114 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHH---CTTCEEEECCTTTCC-CSSCEEEEEECTTGGGGC
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHh---CCCCEEEECCHHHcc-cCCCCcEEEEcCchHhhc
Confidence 578999999 999999999998878999999999999999743 257999999987633 357899999543 55544
Q ss_pred h---------HHHHhccccCcEEEEEe
Q psy8015 103 P---------EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 103 p---------~~l~~~LkpgG~lvi~~ 120 (165)
+ ..+.+.|||||++++..
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 115 KTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 2 35789999999999864
No 170
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.41 E-value=9.5e-13 Score=107.67 Aligned_cols=93 Identities=10% Similarity=-0.149 Sum_probs=73.2
Q ss_pred CCCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCCCCCCCccEEEEcCC
Q psy8015 24 HSKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASFGDNGPYDAIHVGAA 98 (165)
Q Consensus 24 ~~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~~~~~~fD~I~i~~~ 98 (165)
..++.+|||| ||+|.++..+++.. .+|+++|+++ |++.|+ .+..+. ++++++.+|+.+...+.++||+|++...
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 3678999999 99999999999875 4899999997 999886 555666 6899999998764333478999998752
Q ss_pred ---CCC--ch----HHHHhccccCcEEE
Q psy8015 99 ---YPR--YP----EIFIHHLKSGGRLV 117 (165)
Q Consensus 99 ---~~~--~p----~~l~~~LkpgG~lv 117 (165)
..+ .+ ..+.+.|||||+++
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 221 12 34568999999987
No 171
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.41 E-value=3.1e-13 Score=112.39 Aligned_cols=110 Identities=13% Similarity=0.014 Sum_probs=83.0
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCC--CeEEEEccCCCCCC-
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPD--HDYDLIADGRASFG- 85 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~--nV~~~~gD~~~~~~- 85 (165)
....++..+. .++++|||+ ||+|.++..+|+.. .+|+++|+|+++++.|+ ++..+++ |++++.+|+.+.++
T Consensus 201 ~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~ 278 (385)
T 2b78_A 201 QVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKY 278 (385)
T ss_dssp HHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHH
T ss_pred HHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHH
Confidence 3344444432 578999999 99999999999854 68999999999999996 5556776 89999999865332
Q ss_pred ---CCCCccEEEEcCCCC-----Cch----------HHHHhccccCcEEEEEecCCC
Q psy8015 86 ---DNGPYDAIHVGAAYP-----RYP----------EIFIHHLKSGGRLVIPIGDTK 124 (165)
Q Consensus 86 ---~~~~fD~I~i~~~~~-----~~p----------~~l~~~LkpgG~lvi~~~~~~ 124 (165)
...+||+|+++.... ... ..+.+.|+|||++++.+....
T Consensus 279 ~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 279 ARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp HHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 135899999986541 221 234689999999999887654
No 172
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.41 E-value=6.4e-14 Score=119.04 Aligned_cols=104 Identities=15% Similarity=0.040 Sum_probs=81.1
Q ss_pred HHHHhcCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC-CCCCc
Q psy8015 18 VTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG-DNGPY 90 (165)
Q Consensus 18 l~~l~~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~-~~~~f 90 (165)
+..+....++++|||+ ||+|..|..+|... ++|+++|+++++++.++ ++++|+.|++++++|+..... ..++|
T Consensus 97 ~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~F 176 (456)
T 3m4x_A 97 VGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFF 176 (456)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCE
T ss_pred HHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccC
Confidence 3333345789999999 99999999999863 58999999999999995 677888999999999865321 23689
Q ss_pred cEEEEcCCCC------Cc----------------------hHHHHhccccCcEEEEEec
Q psy8015 91 DAIHVGAAYP------RY----------------------PEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 91 D~I~i~~~~~------~~----------------------p~~l~~~LkpgG~lvi~~~ 121 (165)
|+|++++.+. .- .+.+.+.|||||+|+....
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred CEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9999987642 11 1235689999999998654
No 173
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.40 E-value=9.3e-13 Score=104.35 Aligned_cols=95 Identities=8% Similarity=-0.067 Sum_probs=76.7
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--ccc----CCCCCeEEEEccCCCCCCCCCCccEEEEcC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SST----IDPDHDYDLIADGRASFGDNGPYDAIHVGA 97 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~----~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~ 97 (165)
..+++|||| ||+|+++..+++...+|+++|+|+++++.|+ +.. ...++++++.+|+.+.+ ++||+|+++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~ 147 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ 147 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC
Confidence 456899999 9999999888765568999999999999997 322 12357999999997644 6899999986
Q ss_pred CCCC-chHHHHhccccCcEEEEEecC
Q psy8015 98 AYPR-YPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 98 ~~~~-~p~~l~~~LkpgG~lvi~~~~ 122 (165)
..+. ..+.+.+.|+|||++++..+.
T Consensus 148 ~dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 148 EPDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp CCCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 5543 356789999999999997654
No 174
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.40 E-value=4.7e-13 Score=107.89 Aligned_cols=88 Identities=11% Similarity=-0.032 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGP 89 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~ 89 (165)
+..++++++.+. ..++++|||| ||+|++|..|++.+.+|+++|+|++|++.++.+..+.+|++++++|+.+...+..+
T Consensus 36 ~~i~~~Iv~~l~-~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~ 114 (295)
T 3gru_A 36 KNFVNKAVESAN-LTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLD 114 (295)
T ss_dssp HHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSC
T ss_pred HHHHHHHHHhcC-CCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCC
Confidence 466788888885 4789999999 99999999999999999999999999999962211457899999999874333457
Q ss_pred ccEEEEcCCC
Q psy8015 90 YDAIHVGAAY 99 (165)
Q Consensus 90 fD~I~i~~~~ 99 (165)
||+|+.+..+
T Consensus 115 fD~Iv~NlPy 124 (295)
T 3gru_A 115 FNKVVANLPY 124 (295)
T ss_dssp CSEEEEECCG
T ss_pred ccEEEEeCcc
Confidence 9999976544
No 175
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.40 E-value=5.5e-14 Score=119.67 Aligned_cols=98 Identities=16% Similarity=0.004 Sum_probs=78.1
Q ss_pred cCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC-CCCCccEEEE
Q psy8015 23 GHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG-DNGPYDAIHV 95 (165)
Q Consensus 23 ~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~-~~~~fD~I~i 95 (165)
...++++|||+ ||+|..|..+|... ++|+++|+++++++.++ ++++|+. ++++++|+..... ..++||+|++
T Consensus 98 ~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~ 176 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLL 176 (464)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEE
T ss_pred CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEE
Confidence 45789999999 99999999999874 58999999999999996 6777887 9999999865321 2468999999
Q ss_pred cCCCC---------C-------------------chHHHHhccccCcEEEEEec
Q psy8015 96 GAAYP---------R-------------------YPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 96 ~~~~~---------~-------------------~p~~l~~~LkpgG~lvi~~~ 121 (165)
++.+. + +.+.+.+.|||||+|+....
T Consensus 177 D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 177 DAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp ECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred CCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 76542 1 11245789999999998643
No 176
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.39 E-value=1.6e-13 Score=113.82 Aligned_cols=103 Identities=12% Similarity=0.007 Sum_probs=82.3
Q ss_pred HHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCC----CCCccE
Q psy8015 20 YLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGD----NGPYDA 92 (165)
Q Consensus 20 ~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~----~~~fD~ 92 (165)
++... ++++|||+ ||+|.++..+++...+|+++|+++++++.|+ ++..+++|++++.+|+.+.++. ..+||+
T Consensus 204 ~~~~~-~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 204 YMERF-RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp HGGGC-CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred HHHhc-CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeE
Confidence 34444 78999999 9999999999988779999999999999996 5666788899999998654321 468999
Q ss_pred EEEcCCCCC---------------chHHHHhccccCcEEEEEecCC
Q psy8015 93 IHVGAAYPR---------------YPEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 93 I~i~~~~~~---------------~p~~l~~~LkpgG~lvi~~~~~ 123 (165)
|+++..... +...+.+.|+|||++++.....
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 999865411 2235679999999999987654
No 177
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.39 E-value=1e-12 Score=106.32 Aligned_cols=111 Identities=11% Similarity=-0.083 Sum_probs=80.6
Q ss_pred CchHHHHHHHHHHhc--CCCCCeEEEE-ccccHHHHHHhccCCcEEEEeC----CHHHHHhcccccCCCCCeEEEEc-cC
Q psy8015 9 SVSGAVAKYVTYLSG--HSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINV----YYYLSGGPLSSTIDPDHDYDLIA-DG 80 (165)
Q Consensus 9 ~~~~~~~~~l~~l~~--~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~----~~~~~~~A~~~~~~~~nV~~~~g-D~ 80 (165)
-+++...++.+++.. ..++++|||+ ||+|.+|..+++. ++|+++|+ ++.+++.++.+..+.++|+++.+ |.
T Consensus 63 ~~sR~a~KL~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~ 141 (305)
T 2p41_A 63 AVSRGSAKLRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDV 141 (305)
T ss_dssp CSSTHHHHHHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCT
T ss_pred ccccHHHHHHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEecccc
Confidence 355666666665532 3678999999 9999999999998 89999999 56554443334444568999999 88
Q ss_pred CCCCCCCCCccEEEEcCCCC---Cc---------hHHHHhccccCcEEEEEecC
Q psy8015 81 RASFGDNGPYDAIHVGAAYP---RY---------PEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 81 ~~~~~~~~~fD~I~i~~~~~---~~---------p~~l~~~LkpgG~lvi~~~~ 122 (165)
... + .++||+|+++.+.. .. ...+.+.|||||++++-+-.
T Consensus 142 ~~l-~-~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 142 FFI-P-PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp TTS-C-CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred ccC-C-cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 653 3 36899999987753 11 12356899999999986543
No 178
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.39 E-value=9.2e-14 Score=108.25 Aligned_cols=102 Identities=11% Similarity=0.056 Sum_probs=68.2
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcccc--c---CCCCCeEEEE-ccCCCCCC
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSS--T---IDPDHDYDLI-ADGRASFG 85 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~--~---~~~~nV~~~~-gD~~~~~~ 85 (165)
..++++.+....++.+|||| ||||+++..|++.. .+|+++|++++|++.|+.+ + .+..|+.+.. +|....
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-- 102 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQG-- 102 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSC--
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcC--
Confidence 34555555432357799999 99999999999876 5999999999999987521 1 1222444333 222211
Q ss_pred CCCCccEEEEcCCC---CCchHHHHhccccCcEEEEEe
Q psy8015 86 DNGPYDAIHVGAAY---PRYPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 86 ~~~~fD~I~i~~~~---~~~p~~l~~~LkpgG~lvi~~ 120 (165)
.||.+.++... ..+..++.+.|||||++++.+
T Consensus 103 ---~~d~~~~D~v~~~l~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 103 ---RPSFTSIDVSFISLDLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp ---CCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEEE
T ss_pred ---CCCEEEEEEEhhhHHHHHHHHHHhccCCCEEEEEE
Confidence 24444444433 345578899999999999975
No 179
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.39 E-value=5.6e-13 Score=103.55 Aligned_cols=97 Identities=14% Similarity=-0.082 Sum_probs=75.9
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCC-cEEEEeCCHHHHHhcc--cccCCC-----------------------------C
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIP-NSFNINVYYYLSGGPL--SSTIDP-----------------------------D 71 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~-~V~aiD~~~~~~~~A~--~~~~~~-----------------------------~ 71 (165)
.++.+|||+ ||+|.++..+++... +|+++|+++.|++.|+ ++..+. .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 467899999 999999999988775 9999999999999996 322110 0
Q ss_pred Ce-EEEEccCCCCCC-CC---CCccEEEEcCCCC----Cch------HHHHhccccCcEEEEEec
Q psy8015 72 HD-YDLIADGRASFG-DN---GPYDAIHVGAAYP----RYP------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 72 nV-~~~~gD~~~~~~-~~---~~fD~I~i~~~~~----~~p------~~l~~~LkpgG~lvi~~~ 121 (165)
++ +++.+|..+..+ .. ++||+|++....+ +.+ .++.+.|||||++++...
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 27 999999876433 33 6899999988776 432 357899999999999764
No 180
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.38 E-value=1.2e-12 Score=98.95 Aligned_cols=104 Identities=15% Similarity=0.029 Sum_probs=78.7
Q ss_pred chHHHHHHHHHHhc---CCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCC
Q psy8015 10 VSGAVAKYVTYLSG---HSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFG 85 (165)
Q Consensus 10 ~~~~~~~~l~~l~~---~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~ 85 (165)
.+++.-++++++.. ..++.+|||+ ||+|.+|..+++..++|+++|+++.. ..+|++++++|..+...
T Consensus 6 r~Ra~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~---------~~~~v~~~~~D~~~~~~ 76 (191)
T 3dou_A 6 RSRAAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME---------EIAGVRFIRCDIFKETI 76 (191)
T ss_dssp TSHHHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC---------CCTTCEEEECCTTSSSH
T ss_pred CCcHHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc---------cCCCeEEEEccccCHHH
Confidence 45677777777753 2689999999 99999999999998899999999741 24689999999865321
Q ss_pred --------C---CCCccEEEEcCCCCCc-----------------hHHHHhccccCcEEEEEecC
Q psy8015 86 --------D---NGPYDAIHVGAAYPRY-----------------PEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 86 --------~---~~~fD~I~i~~~~~~~-----------------p~~l~~~LkpgG~lvi~~~~ 122 (165)
. .++||+|+++++.... .+.+.+.|||||++++-+-.
T Consensus 77 ~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 77 FDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp HHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 0 0389999998754311 12357899999999987643
No 181
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.38 E-value=1.5e-12 Score=99.32 Aligned_cols=89 Identities=11% Similarity=0.021 Sum_probs=73.5
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCCch
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPRYP 103 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~~p 103 (165)
.++.+|||+ ||+|.++..++.. +++|+++++++.|+.+ +++++.+|+.....+.++||+|++....++++
T Consensus 46 ~~~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~-----~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (219)
T 1vlm_A 46 LPEGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR-----GVFVLKGTAENLPLKDESFDFALMVTTICFVD 116 (219)
T ss_dssp CCSSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT-----TCEEEECBTTBCCSCTTCEEEEEEESCGGGSS
T ss_pred CCCCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc-----CCEEEEcccccCCCCCCCeeEEEEcchHhhcc
Confidence 458999999 9999999988875 9999999999998743 68999999866433456899999998876554
Q ss_pred ------HHHHhccccCcEEEEEecC
Q psy8015 104 ------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 104 ------~~l~~~LkpgG~lvi~~~~ 122 (165)
+.+.+.|+|||++++....
T Consensus 117 ~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 117 DPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 3578999999999997653
No 182
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.38 E-value=2.6e-13 Score=112.96 Aligned_cols=108 Identities=8% Similarity=-0.101 Sum_probs=83.4
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccCCC-C-CeEEEEccCCCCCCC-
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTIDP-D-HDYDLIADGRASFGD- 86 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~~~-~-nV~~~~gD~~~~~~~- 86 (165)
...++..+ .++++|||+ ||+|.++..+++. ..+|+++|+++++++.|+ ++..++ + |++++.+|+.+.++.
T Consensus 211 ~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~ 287 (396)
T 3c0k_A 211 SRLATRRY---VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTY 287 (396)
T ss_dssp HHHHHHHH---CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHH
T ss_pred HHHHHHHh---hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHH
Confidence 33444444 578999999 9999999999987 479999999999999996 555677 6 899999998654321
Q ss_pred ---CCCccEEEEcCCCC---------------CchHHHHhccccCcEEEEEecCCC
Q psy8015 87 ---NGPYDAIHVGAAYP---------------RYPEIFIHHLKSGGRLVIPIGDTK 124 (165)
Q Consensus 87 ---~~~fD~I~i~~~~~---------------~~p~~l~~~LkpgG~lvi~~~~~~ 124 (165)
..+||+|+++.... .+...+.+.|+|||++++.+....
T Consensus 288 ~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 288 RDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp HHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 35899999986431 112346799999999999886543
No 183
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.38 E-value=1.1e-12 Score=107.20 Aligned_cols=93 Identities=8% Similarity=-0.080 Sum_probs=77.5
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCCCCCCCccEEEEcCCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASFGDNGPYDAIHVGAAYP 100 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~ 100 (165)
.++++|||+ ||+|.++.. ++...+|+++|+|+++++.|+ ++..++ +|++++++|+.+.+ ++||+|+++....
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~~ 269 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPKF 269 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTTT
T ss_pred CCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcHh
Confidence 578999999 999999999 886679999999999999996 555666 57999999997654 6899999974322
Q ss_pred --CchHHHHhccccCcEEEEEec
Q psy8015 101 --RYPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 101 --~~p~~l~~~LkpgG~lvi~~~ 121 (165)
.+.+.+.+.|+|||++++...
T Consensus 270 ~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 270 AHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp GGGGHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEEe
Confidence 455678899999999988643
No 184
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.38 E-value=1e-12 Score=107.82 Aligned_cols=92 Identities=11% Similarity=-0.115 Sum_probs=72.9
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCCCCCCCCCccEEEEcCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRASFGDNGPYDAIHVGAAY 99 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~~~~~~~~fD~I~i~~~~ 99 (165)
.++++|||+ ||+|.++..+++.. .+|+++|+++ |++.|+ .+..+..+ ++++.+|+.+...+.++||+|++....
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 578999999 99999999999884 5999999994 999996 55567665 999999997753335789999986532
Q ss_pred C-----Cch----HHHHhccccCcEEE
Q psy8015 100 P-----RYP----EIFIHHLKSGGRLV 117 (165)
Q Consensus 100 ~-----~~p----~~l~~~LkpgG~lv 117 (165)
. ..+ ..+.+.|||||+++
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEc
Confidence 1 222 34578999999987
No 185
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.37 E-value=8.6e-13 Score=105.03 Aligned_cols=98 Identities=13% Similarity=0.134 Sum_probs=77.7
Q ss_pred CCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc--cc----cCCCCCeEEEEccCCCCCC-CCCCccEEE
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL--SS----TIDPDHDYDLIADGRASFG-DNGPYDAIH 94 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~--~~----~~~~~nV~~~~gD~~~~~~-~~~~fD~I~ 94 (165)
..+++|||| ||+|.++..+++. ..+|+++|+|+++++.|| +. .++.++++++.+|+.+.++ ..++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 467899999 9999999999987 369999999999999997 32 2334579999999865332 246899999
Q ss_pred EcCCCCC----------chHHHHhccccCcEEEEEecC
Q psy8015 95 VGAAYPR----------YPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 95 i~~~~~~----------~p~~l~~~LkpgG~lvi~~~~ 122 (165)
++...+. +-+.+.+.|+|||++++..+.
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9876542 234678999999999998653
No 186
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.37 E-value=2.1e-12 Score=106.97 Aligned_cols=92 Identities=10% Similarity=-0.116 Sum_probs=73.4
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCC-cEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCCCCCCCCCccEEEEcCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIP-NSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRASFGDNGPYDAIHVGAAY 99 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~-~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~~~~~~~~fD~I~i~~~~ 99 (165)
.++.+|||+ ||+|.++..+++... +|+++|.+ +|++.|+ .+..++.+ ++++++|+.+...+ ++||+|++....
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMG 139 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCB
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChh
Confidence 678999999 999999999998764 99999999 9999996 55567654 99999999764333 789999996532
Q ss_pred CC-----ch----HHHHhccccCcEEEE
Q psy8015 100 PR-----YP----EIFIHHLKSGGRLVI 118 (165)
Q Consensus 100 ~~-----~p----~~l~~~LkpgG~lvi 118 (165)
.. .+ ..+.+.|||||+++.
T Consensus 140 ~~l~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred hcccchHHHHHHHHHHHhhCCCCeEEEE
Confidence 22 22 345689999999875
No 187
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.36 E-value=1.6e-12 Score=94.22 Aligned_cols=99 Identities=13% Similarity=0.004 Sum_probs=75.5
Q ss_pred HHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCC------
Q psy8015 15 AKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASF------ 84 (165)
Q Consensus 15 ~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~------ 84 (165)
..+++.+....++.+|||+ ||+|.++..+++.. .+|+++|+++ +++. .+++++.+|..+..
T Consensus 11 ~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------~~~~~~~~d~~~~~~~~~~~ 81 (180)
T 1ej0_A 11 DEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------VGVDFLQGDFRDELVMKALL 81 (180)
T ss_dssp HHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------TTEEEEESCTTSHHHHHHHH
T ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------CcEEEEEcccccchhhhhhh
Confidence 3455555434688999999 99999999999873 6899999999 6542 57999999987642
Q ss_pred --CCCCCccEEEEcCCCCCc-----------------hHHHHhccccCcEEEEEecC
Q psy8015 85 --GDNGPYDAIHVGAAYPRY-----------------PEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 85 --~~~~~fD~I~i~~~~~~~-----------------p~~l~~~LkpgG~lvi~~~~ 122 (165)
.+.++||+|+++...+.. .+.+.+.|+|||++++....
T Consensus 82 ~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 82 ERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp HHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred ccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 234689999998766432 23567899999999997654
No 188
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.36 E-value=1.3e-12 Score=101.78 Aligned_cols=74 Identities=7% Similarity=-0.113 Sum_probs=59.3
Q ss_pred CCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCC----CCCC--CCCccEE
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRA----SFGD--NGPYDAI 93 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~----~~~~--~~~fD~I 93 (165)
++.+|||+ ||+|.++..+++. ..+|+++|++++|++.|+ .+..++++ ++++++|+.+ .++. .++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 46799999 9999999888876 469999999999999996 55567765 9999999754 2222 2589999
Q ss_pred EEcCCC
Q psy8015 94 HVGAAY 99 (165)
Q Consensus 94 ~i~~~~ 99 (165)
+++...
T Consensus 145 ~~npp~ 150 (254)
T 2h00_A 145 MCNPPF 150 (254)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 998443
No 189
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.36 E-value=1.1e-12 Score=104.53 Aligned_cols=97 Identities=15% Similarity=0.161 Sum_probs=76.1
Q ss_pred CCCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccC-----------CCCCeEEEEccCCCCCCCCC
Q psy8015 24 HSKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTI-----------DPDHDYDLIADGRASFGDNG 88 (165)
Q Consensus 24 ~~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~-----------~~~nV~~~~gD~~~~~~~~~ 88 (165)
+.++.+|||| ||+|.++..+++. ..+|+++|+|+++++.|+ + .+ ..++++++.+|+.+.++..+
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~ 151 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNR 151 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCC
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccC
Confidence 3567899999 9999999999987 358999999999999997 4 33 23579999999864222146
Q ss_pred CccEEEEcCCCCC----------chHHHHhccccCcEEEEEec
Q psy8015 89 PYDAIHVGAAYPR----------YPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 89 ~fD~I~i~~~~~~----------~p~~l~~~LkpgG~lvi~~~ 121 (165)
+||+|+++...+. +-+.+.+.|+|||++++..+
T Consensus 152 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 152 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 8999999876431 12467899999999999754
No 190
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.35 E-value=2.9e-12 Score=102.78 Aligned_cols=109 Identities=8% Similarity=0.001 Sum_probs=81.3
Q ss_pred HHHHHHHHhcC-CCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccC-------CCCCeEEEEccCC
Q psy8015 14 VAKYVTYLSGH-SKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTI-------DPDHDYDLIADGR 81 (165)
Q Consensus 14 ~~~~l~~l~~~-~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~-------~~~nV~~~~gD~~ 81 (165)
..++++.+... .++.+|||+ ||+|..+..+++. ..+|+++|++++|++.|+ .+.. +..+++++.+|+.
T Consensus 21 ~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~ 100 (313)
T 3bgv_A 21 IGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSS 100 (313)
T ss_dssp HHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTT
T ss_pred HHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEeccc
Confidence 34555555432 378899999 9999999988864 468999999999999996 2221 3457999999987
Q ss_pred CCC-----C-CCCCccEEEEcCCCCCc----h------HHHHhccccCcEEEEEecC
Q psy8015 82 ASF-----G-DNGPYDAIHVGAAYPRY----P------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 82 ~~~-----~-~~~~fD~I~i~~~~~~~----p------~~l~~~LkpgG~lvi~~~~ 122 (165)
... + +.++||+|++..+.+.+ + .++.+.|||||++++....
T Consensus 101 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 101 KELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp TSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred ccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 642 2 23589999999887654 2 2568999999999998764
No 191
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.35 E-value=4.7e-13 Score=105.26 Aligned_cols=97 Identities=11% Similarity=-0.138 Sum_probs=72.4
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccC--CC---------------------------C
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTI--DP---------------------------D 71 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~--~~---------------------------~ 71 (165)
.++.+|||| ||+|.++..++... .+|+++|+|+.|++.|+ ++.. +. .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 578899999 99998887776654 58999999999999986 2211 11 1
Q ss_pred CeE-EEEccCCCCCC----CCCCccEEEEcCCCCCc----h------HHHHhccccCcEEEEEec
Q psy8015 72 HDY-DLIADGRASFG----DNGPYDAIHVGAAYPRY----P------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 72 nV~-~~~gD~~~~~~----~~~~fD~I~i~~~~~~~----p------~~l~~~LkpgG~lvi~~~ 121 (165)
+++ ++.+|..+..+ ..++||+|++....+++ + .++.+.|||||++++...
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 344 89999876322 24689999998776543 2 256799999999999753
No 192
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.35 E-value=7.7e-13 Score=110.48 Aligned_cols=106 Identities=7% Similarity=-0.039 Sum_probs=77.9
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCC-CC
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGD-NG 88 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~-~~ 88 (165)
...+++..+ .+++++|||+ ||||.+|..+|+...+|+++|+|+.+++.|+ ++..+++ .++.++|+.+.++. .+
T Consensus 203 ~~r~~l~~~--~~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~-~~~~~~D~~~~l~~~~~ 279 (393)
T 4dmg_A 203 ENRRLFEAM--VRPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLR-VDIRHGEALPTLRGLEG 279 (393)
T ss_dssp HHHHHHHTT--CCTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC-CEEEESCHHHHHHTCCC
T ss_pred HHHHHHHHH--hcCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCC-CcEEEccHHHHHHHhcC
Confidence 344444443 2469999999 9999999999998777999999999999996 4455665 36779998653321 23
Q ss_pred CccEEEEcCCCC---------------CchHHHHhccccCcEEEEEec
Q psy8015 89 PYDAIHVGAAYP---------------RYPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 89 ~fD~I~i~~~~~---------------~~p~~l~~~LkpgG~lvi~~~ 121 (165)
.||+|+++...- .+.+.+.+.|+|||+|++...
T Consensus 280 ~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 280 PFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp CEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 499999986541 122346789999999996544
No 193
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.35 E-value=2.6e-12 Score=97.41 Aligned_cols=93 Identities=12% Similarity=0.132 Sum_probs=75.3
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC-CC-CCCCccEEEEcCCCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS-FG-DNGPYDAIHVGAAYPR 101 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~-~~-~~~~fD~I~i~~~~~~ 101 (165)
.++.+|||+ ||+|.++..+++...+|+++|+++++++.|+.+. .+++.+|+.+. .+ +.++||+|++....++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~ 105 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL-----DHVVLGDIETMDMPYEEEQFDCVIFGDVLEH 105 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS-----SEEEESCTTTCCCCSCTTCEEEEEEESCGGG
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC-----CcEEEcchhhcCCCCCCCccCEEEECChhhh
Confidence 578999999 9999999999988779999999999999886321 37888998642 22 3478999999988776
Q ss_pred ch------HHHHhccccCcEEEEEecC
Q psy8015 102 YP------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 102 ~p------~~l~~~LkpgG~lvi~~~~ 122 (165)
++ +.+.+.|+|||++++....
T Consensus 106 ~~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 106 LFDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp SSCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 54 3567899999999997654
No 194
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.35 E-value=2.4e-12 Score=104.01 Aligned_cols=97 Identities=11% Similarity=0.070 Sum_probs=75.7
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--ccc----CCCCCeEEEEccCCCCCC-CCCCccEEE
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SST----IDPDHDYDLIADGRASFG-DNGPYDAIH 94 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~----~~~~nV~~~~gD~~~~~~-~~~~fD~I~ 94 (165)
.++++|||| ||+|+++..+++.. .+|+++|+|+++++.|+ +.. +..++++++.+|+.+.++ ..++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 567899999 99999999999874 68999999999999996 332 224689999999865222 246899999
Q ss_pred EcCCCCC----------chHHHHhccccCcEEEEEec
Q psy8015 95 VGAAYPR----------YPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 95 i~~~~~~----------~p~~l~~~LkpgG~lvi~~~ 121 (165)
++...+. +-+.+.+.|+|||++++...
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 9876532 23467899999999999763
No 195
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.35 E-value=1.4e-12 Score=109.61 Aligned_cols=103 Identities=18% Similarity=0.206 Sum_probs=80.1
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC--CCCC
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF--GDNG 88 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~--~~~~ 88 (165)
.+..++ ...++++|||+ ||+|..|..++... ++|+++|+++.+++.++ +++.|. +++++.+|+.... .+.+
T Consensus 237 ~~~~~l-~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-~~~~~~~D~~~~~~~~~~~ 314 (429)
T 1sqg_A 237 GCMTWL-APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQWCGEQ 314 (429)
T ss_dssp THHHHH-CCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-CCEEEECCTTCTHHHHTTC
T ss_pred HHHHHc-CCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-CeEEEeCchhhchhhcccC
Confidence 344444 45889999999 99999999999887 59999999999999985 566676 5899999987532 1236
Q ss_pred CccEEEEcCCCC------C----------------------chHHHHhccccCcEEEEEe
Q psy8015 89 PYDAIHVGAAYP------R----------------------YPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 89 ~fD~I~i~~~~~------~----------------------~p~~l~~~LkpgG~lvi~~ 120 (165)
+||+|+++..+. + +.+.+.+.|||||++++..
T Consensus 315 ~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 315 QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 899999976442 1 1234678999999999875
No 196
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.35 E-value=5.6e-13 Score=109.10 Aligned_cols=97 Identities=14% Similarity=0.156 Sum_probs=75.7
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccC--C--CCCeEEEEccCCCCCC--CCCCccEE
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTI--D--PDHDYDLIADGRASFG--DNGPYDAI 93 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~--~--~~nV~~~~gD~~~~~~--~~~~fD~I 93 (165)
.+..+|||| ||+|+++..+++.. .+|+++|+|+++++.|+ ++.+ + .++++++.+|+.+.++ ..++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 467899999 99999999999873 68999999999999996 3321 2 3579999999865322 24689999
Q ss_pred EEcCCCCC----------chHHHHhccccCcEEEEEec
Q psy8015 94 HVGAAYPR----------YPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 94 ~i~~~~~~----------~p~~l~~~LkpgG~lvi~~~ 121 (165)
+++...+. +-+.+.+.|+|||++++..+
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 236 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE 236 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 99865332 12367899999999999643
No 197
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.35 E-value=3.5e-12 Score=104.46 Aligned_cols=101 Identities=10% Similarity=-0.076 Sum_probs=76.5
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCCCCCCCc
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASFGDNGPY 90 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~~~~~~f 90 (165)
.+++.+. ..++++|||| ||+|.++..+++.. .+|+++|.++ +++.|+ .+..++ ++++++.+|..+. +..++|
T Consensus 41 ~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~~~~~~ 117 (348)
T 2y1w_A 41 AILQNHT-DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV-SLPEQV 117 (348)
T ss_dssp HHHHTGG-GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSCE
T ss_pred HHHhccc-cCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhC-CCCCce
Confidence 3444443 2688999999 99999999999875 5999999996 888886 555566 5799999998763 223689
Q ss_pred cEEEEcCCCCC-----chH---HHHhccccCcEEEEE
Q psy8015 91 DAIHVGAAYPR-----YPE---IFIHHLKSGGRLVIP 119 (165)
Q Consensus 91 D~I~i~~~~~~-----~p~---~l~~~LkpgG~lvi~ 119 (165)
|+|++.....+ +++ .+.+.|||||++++.
T Consensus 118 D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 118 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred eEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 99999865432 222 347899999999853
No 198
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.35 E-value=1.5e-12 Score=105.88 Aligned_cols=95 Identities=15% Similarity=0.007 Sum_probs=74.8
Q ss_pred CeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC--CCCCccEEEEcCCCC
Q psy8015 28 LDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG--DNGPYDAIHVGAAYP 100 (165)
Q Consensus 28 ~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~--~~~~fD~I~i~~~~~ 100 (165)
.+|||| ||+|+++..+++. ..+|+++|+|+++++.|| +...+.++++++.+|+.+.+. ..++||+|+++...+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 399999 9999999999984 348999999999999997 433334689999999865332 246899999986543
Q ss_pred C-c---------hHHHHhccccCcEEEEEecC
Q psy8015 101 R-Y---------PEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 101 ~-~---------p~~l~~~LkpgG~lvi~~~~ 122 (165)
. . -+.+.+.|+|||++++....
T Consensus 171 ~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 2 1 23578999999999998863
No 199
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.35 E-value=1.9e-12 Score=103.43 Aligned_cols=86 Identities=8% Similarity=-0.068 Sum_probs=70.2
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASFGD 86 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~~~ 86 (165)
+....++++.+. ..++++|||| ||+|.+|..+++...+|+++|+|++|++.|+ .+..+. +|++++++|+.+..
T Consensus 14 ~~i~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~-- 90 (285)
T 1zq9_A 14 PLIINSIIDKAA-LRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD-- 90 (285)
T ss_dssp HHHHHHHHHHTC-CCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC--
T ss_pred HHHHHHHHHhcC-CCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc--
Confidence 456778888874 4789999999 9999999999999899999999999999996 444454 58999999997632
Q ss_pred CCCccEEEEcCCC
Q psy8015 87 NGPYDAIHVGAAY 99 (165)
Q Consensus 87 ~~~fD~I~i~~~~ 99 (165)
...||+|+++...
T Consensus 91 ~~~fD~vv~nlpy 103 (285)
T 1zq9_A 91 LPFFDTCVANLPY 103 (285)
T ss_dssp CCCCSEEEEECCG
T ss_pred chhhcEEEEecCc
Confidence 2379999996544
No 200
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.34 E-value=4e-12 Score=102.48 Aligned_cols=98 Identities=12% Similarity=0.092 Sum_probs=75.6
Q ss_pred CCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc--cc----cCCCCCeEEEEccCCCCCC--CCCCccEE
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL--SS----TIDPDHDYDLIADGRASFG--DNGPYDAI 93 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~--~~----~~~~~nV~~~~gD~~~~~~--~~~~fD~I 93 (165)
.++.+|||| ||+|.++..+++. ..+|+++|+|+++++.|+ +. ....++++++.+|+.+... ..++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 567899999 9999999999986 369999999999999996 31 1234679999999865332 25789999
Q ss_pred EEcCCCCCch----------HHHHhccccCcEEEEEecC
Q psy8015 94 HVGAAYPRYP----------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 94 ~i~~~~~~~p----------~~l~~~LkpgG~lvi~~~~ 122 (165)
+++...+..| +.+.+.|||||++++..+.
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 9987654322 3578999999999997654
No 201
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.34 E-value=1.8e-12 Score=104.49 Aligned_cols=97 Identities=13% Similarity=-0.001 Sum_probs=69.6
Q ss_pred CCCeEEEE-ccccHHHH-HHhccCCcEEEEeCCHHHHHhcc--cccCCCC------CeEEEEccCCCC--------CCCC
Q psy8015 26 KRLDCLAL-TSNTKQST-TLPTFIPNSFNINVYYYLSGGPL--SSTIDPD------HDYDLIADGRAS--------FGDN 87 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~-~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~------nV~~~~gD~~~~--------~~~~ 87 (165)
++.+|||| ||+|..+. ++.....+|+++|+|++|++.|+ .+..+.. ++++.++|.... ..+.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 47899999 99997554 44444578999999999999997 2222322 367888877211 1134
Q ss_pred CCccEEEEcCCCCCc---------hHHHHhccccCcEEEEEecC
Q psy8015 88 GPYDAIHVGAAYPRY---------PEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 88 ~~fD~I~i~~~~~~~---------p~~l~~~LkpgG~lvi~~~~ 122 (165)
++||+|++..+.+.+ ..++.+.|||||++++....
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 689999987765422 23688999999999987764
No 202
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.34 E-value=4.7e-13 Score=111.29 Aligned_cols=99 Identities=9% Similarity=-0.036 Sum_probs=79.1
Q ss_pred CCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCC----CCCCccEEEE
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFG----DNGPYDAIHV 95 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~----~~~~fD~I~i 95 (165)
.++++|||+ ||+|.++..+++. ..+|+++|+++++++.|+ ++..+++ |++++.+|+.+.++ ...+||+|++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 378999999 9999999999987 569999999999999996 5556776 89999999865332 1468999999
Q ss_pred cCCCCC---------------chHHHHhccccCcEEEEEecCC
Q psy8015 96 GAAYPR---------------YPEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 96 ~~~~~~---------------~p~~l~~~LkpgG~lvi~~~~~ 123 (165)
+..... +...+.+.|+|||++++.....
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 865421 1235679999999998876643
No 203
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.34 E-value=9.2e-12 Score=99.04 Aligned_cols=98 Identities=4% Similarity=-0.136 Sum_probs=71.7
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCC-cEEEEeC-CHHHHHhcc--c-----ccCCCC-----CeEEEEccCCCC---CC-
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIP-NSFNINV-YYYLSGGPL--S-----STIDPD-----HDYDLIADGRAS---FG- 85 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~-~V~aiD~-~~~~~~~A~--~-----~~~~~~-----nV~~~~gD~~~~---~~- 85 (165)
.++.+|||+ ||+|.++..+++... +|+++|+ ++++++.|+ . +..++. +++++..|..+. +.
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 478899999 999999999998764 8999999 899999996 4 344443 788886654321 11
Q ss_pred --CCCCccEEEEcCCCCCch------HHHHhccc---c--CcEEEEEecC
Q psy8015 86 --DNGPYDAIHVGAAYPRYP------EIFIHHLK---S--GGRLVIPIGD 122 (165)
Q Consensus 86 --~~~~fD~I~i~~~~~~~p------~~l~~~Lk---p--gG~lvi~~~~ 122 (165)
..++||+|++.....+.+ +.+.+.|+ | ||++++.+..
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred hccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 246899999866665442 35778999 9 9998887654
No 204
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.34 E-value=1.8e-12 Score=104.30 Aligned_cols=108 Identities=14% Similarity=0.066 Sum_probs=73.0
Q ss_pred chHHHHHHHHHHhcC---CCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEE-EccCCC-
Q psy8015 10 VSGAVAKYVTYLSGH---SKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDL-IADGRA- 82 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~---~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~-~gD~~~- 82 (165)
||+.--++.+.+... .++.+|||+ ||||++|..|++.. ++|+|+|++++|++.+..+ ..++... ..|...
T Consensus 66 vsrg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~---~~rv~~~~~~ni~~l 142 (291)
T 3hp7_A 66 VSRGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ---DDRVRSMEQYNFRYA 142 (291)
T ss_dssp SSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT---CTTEEEECSCCGGGC
T ss_pred ccchHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---CcccceecccCceec
Confidence 344444444444322 357899999 99999999888874 6999999999999885211 0122221 122211
Q ss_pred ---CCCCCCCccEEEEcCCCCCc---hHHHHhccccCcEEEEEec
Q psy8015 83 ---SFGDNGPYDAIHVGAAYPRY---PEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 83 ---~~~~~~~fD~I~i~~~~~~~---p~~l~~~LkpgG~lvi~~~ 121 (165)
.++ ..+||.|+++.++..+ ..++.+.|||||++++.+.
T Consensus 143 ~~~~l~-~~~fD~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~lvk 186 (291)
T 3hp7_A 143 EPVDFT-EGLPSFASIDVSFISLNLILPALAKILVDGGQVVALVK 186 (291)
T ss_dssp CGGGCT-TCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEEEC
T ss_pred chhhCC-CCCCCEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEEEC
Confidence 122 2359999999887654 4678999999999999743
No 205
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.34 E-value=3.5e-12 Score=105.48 Aligned_cols=108 Identities=12% Similarity=-0.033 Sum_probs=81.9
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCC--cEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIP--NSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASF 84 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~--~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~ 84 (165)
+...+.++.+. ..++.+|||+ ||+|.++..++.... +|+++|+|++|++.|+ ++..|+ ++++++++|+.+..
T Consensus 204 ~~la~~l~~~~--~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 204 ASIANAMIELA--ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS 281 (373)
T ss_dssp HHHHHHHHHHH--TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG
T ss_pred HHHHHHHHHhh--cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 44455566665 4789999999 999999999999876 9999999999999996 666777 57999999997744
Q ss_pred CCCCCccEEEEcCCCCC-------ch-------HHHHhccccCcEEEEEecC
Q psy8015 85 GDNGPYDAIHVGAAYPR-------YP-------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 85 ~~~~~fD~I~i~~~~~~-------~p-------~~l~~~LkpgG~lvi~~~~ 122 (165)
.+.++||+|+++..+.. +. +.+.+.| ||++++....
T Consensus 282 ~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~ 331 (373)
T 3tm4_A 282 QYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE 331 (373)
T ss_dssp GTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESC
T ss_pred cccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC
Confidence 44578999999866431 11 2344555 6777766653
No 206
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.34 E-value=6.3e-13 Score=101.01 Aligned_cols=92 Identities=7% Similarity=-0.062 Sum_probs=73.8
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCCCCCCccEEEEcCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFGDNGPYDAIHVGAA 98 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~~~~~fD~I~i~~~ 98 (165)
.+.++|||+ ||+|-+|..++... .+|+++|+|++|++.|+ ++..|.. |+++ .|..... ..++||+|+..-.
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~-~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDV-YKGTYDVVFLLKM 124 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHH-TTSEEEEEEEETC
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccC-CCCCcChhhHhhH
Confidence 568999999 99999999996653 38999999999999996 6667876 5766 6655443 3478999999988
Q ss_pred CCCchH------HHHhccccCcEEEEE
Q psy8015 99 YPRYPE------IFIHHLKSGGRLVIP 119 (165)
Q Consensus 99 ~~~~p~------~l~~~LkpgG~lvi~ 119 (165)
.|.+.+ .+++.|+|||.+|-.
T Consensus 125 LHlL~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 125 LPVLKQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp HHHHHHTTCCHHHHHHTCEEEEEEEEE
T ss_pred HHhhhhhHHHHHHHHHHhCCCCEEEEe
Confidence 887743 589999999876654
No 207
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.33 E-value=1.4e-12 Score=105.68 Aligned_cols=98 Identities=16% Similarity=0.217 Sum_probs=77.5
Q ss_pred CCCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc--ccc-----CCCCCeEEEEccCCCCCC-CCCCccE
Q psy8015 24 HSKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL--SST-----IDPDHDYDLIADGRASFG-DNGPYDA 92 (165)
Q Consensus 24 ~~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~--~~~-----~~~~nV~~~~gD~~~~~~-~~~~fD~ 92 (165)
+.++.+|||| ||+|.++..+++. ..+|+++|+|+++++.|+ +.. ++.++++++.+|+.+.++ ..++||+
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence 3567899999 9999999999987 468999999999999996 432 224689999999865322 2468999
Q ss_pred EEEcCCCCC---c----------hHHHHhccccCcEEEEEec
Q psy8015 93 IHVGAAYPR---Y----------PEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 93 I~i~~~~~~---~----------p~~l~~~LkpgG~lvi~~~ 121 (165)
|+++...+. - -+.+.+.|||||++++..+
T Consensus 155 Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 155 VIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 999876654 2 2367899999999999754
No 208
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.33 E-value=1.3e-12 Score=104.98 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=75.0
Q ss_pred CCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc--cc----cCCCCCeEEEEccCCCCCC-CCCCccEEE
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL--SS----TIDPDHDYDLIADGRASFG-DNGPYDAIH 94 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~--~~----~~~~~nV~~~~gD~~~~~~-~~~~fD~I~ 94 (165)
.++.+|||| ||+|..+..+++. ..+|+++|+|+++++.|+ +. .++.++++++.+|+.+.++ ..++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 456899999 9999999999987 368999999999999996 32 2234689999999865322 246899999
Q ss_pred EcCCCC-C----------chHHHHhccccCcEEEEEecC
Q psy8015 95 VGAAYP-R----------YPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 95 i~~~~~-~----------~p~~l~~~LkpgG~lvi~~~~ 122 (165)
++...+ . +-+.+.+.|+|||++++..+.
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 976543 1 124678999999999997654
No 209
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.33 E-value=1.3e-12 Score=106.70 Aligned_cols=109 Identities=19% Similarity=0.126 Sum_probs=82.4
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC-------CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEcc
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI-------PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIAD 79 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~-------~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD 79 (165)
+...+..+++.+....++.+|||+ ||||.++..+++.. .+|+++|+++.+++.|+ +...|. ++.++.+|
T Consensus 114 i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D 192 (344)
T 2f8l_A 114 IGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQD 192 (344)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESC
T ss_pred HHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECC
Confidence 344445555555333567899999 99999998888764 57999999999999996 334465 78999999
Q ss_pred CCCCCCCCCCccEEEEcCCCCCc------------------------hHHHHhccccCcEEEEEe
Q psy8015 80 GRASFGDNGPYDAIHVGAAYPRY------------------------PEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 80 ~~~~~~~~~~fD~I~i~~~~~~~------------------------p~~l~~~LkpgG~lvi~~ 120 (165)
.....+ ..+||+|+.+..+..+ .+.+.+.|+|||++++.+
T Consensus 193 ~l~~~~-~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 193 GLANLL-VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp TTSCCC-CCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCccc-cCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 876443 4689999998764322 234578999999999987
No 210
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.33 E-value=1e-11 Score=102.57 Aligned_cols=112 Identities=15% Similarity=0.033 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHh-cCCCCCeEEEEccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC
Q psy8015 11 SGAVAKYVTYLS-GHSKRLDCLALTSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG 85 (165)
Q Consensus 11 ~~~~~~~l~~l~-~~~~~~~vLei~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~ 85 (165)
+...++++.... ...++++|||++|+|.++..+++.. .+|+++|+|++|++.|+ ++..|++||+++.+|+.+.++
T Consensus 156 ~~~~~~~l~~~~~~~~~~~~VLDlGG~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~ 235 (373)
T 2qm3_A 156 ETTVARVILMHTRGDLENKDIFVLGDDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLP 235 (373)
T ss_dssp HHHHHHHHHHHHTTCSTTCEEEEESCTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCC
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEECCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhch
Confidence 344444543322 1236899999999999999998875 58999999999999996 555677789999999987554
Q ss_pred C--CCCccEEEEcCCCCC-----chHHHHhccccCcEE-EEEecC
Q psy8015 86 D--NGPYDAIHVGAAYPR-----YPEIFIHHLKSGGRL-VIPIGD 122 (165)
Q Consensus 86 ~--~~~fD~I~i~~~~~~-----~p~~l~~~LkpgG~l-vi~~~~ 122 (165)
. .++||+|+++..... +.+.+.+.|||||++ ++.+..
T Consensus 236 ~~~~~~fD~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 236 DYALHKFDTFITDPPETLEAIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp TTTSSCBSEEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred hhccCCccEEEECCCCchHHHHHHHHHHHHHcccCCeEEEEEEec
Confidence 3 358999999865431 224678999999954 555544
No 211
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.32 E-value=6.8e-12 Score=102.00 Aligned_cols=92 Identities=11% Similarity=-0.136 Sum_probs=71.7
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCCCCCCccEEEEcCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFGDNGPYDAIHVGAAY 99 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~~~~~fD~I~i~~~~ 99 (165)
.++.+|||+ ||+|.++..+++.. .+|+++|.+ .|++.|+ .+..+.. +++++.+|+.+...+.++||+|++....
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCB
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCch
Confidence 578999999 99999999999875 589999999 5999886 5555664 5999999987643334789999987432
Q ss_pred C-----CchH----HHHhccccCcEEE
Q psy8015 100 P-----RYPE----IFIHHLKSGGRLV 117 (165)
Q Consensus 100 ~-----~~p~----~l~~~LkpgG~lv 117 (165)
. ..++ .+.+.|||||+++
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 2 2232 3458999999987
No 212
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.32 E-value=1.6e-12 Score=105.61 Aligned_cols=98 Identities=12% Similarity=0.056 Sum_probs=76.2
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccC--C--CCCeEEEEccCCCCCC-CCCCccEEE
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTI--D--PDHDYDLIADGRASFG-DNGPYDAIH 94 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~--~--~~nV~~~~gD~~~~~~-~~~~fD~I~ 94 (165)
.+..+|||| ||+|+++..+++.. .+|+++|+|+++++.|+ ++.. + .++++++.+|+.+.++ ..++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 567899999 99999999999873 69999999999999997 4432 2 3579999999865322 246899999
Q ss_pred EcCCCC----------CchHHHHhccccCcEEEEEecC
Q psy8015 95 VGAAYP----------RYPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 95 i~~~~~----------~~p~~l~~~LkpgG~lvi~~~~ 122 (165)
++...+ .+-+.+.+.|+|||++++..+.
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~ 224 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGES 224 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCC
Confidence 987432 2234678999999999997643
No 213
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.32 E-value=1.7e-13 Score=114.17 Aligned_cols=104 Identities=9% Similarity=-0.029 Sum_probs=76.6
Q ss_pred HHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCe--EEEEccCCCCCCCCCCcc
Q psy8015 15 AKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHD--YDLIADGRASFGDNGPYD 91 (165)
Q Consensus 15 ~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV--~~~~gD~~~~~~~~~~fD 91 (165)
..+++.+. ..++.+|||| ||+|.++..+++...+|+++|+|+++++.|+.+ +.++. .+..+++.....+.++||
T Consensus 97 ~~l~~~~~-~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~l~~~~~~fD 173 (416)
T 4e2x_A 97 RDFLATEL-TGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK--GIRVRTDFFEKATADDVRRTEGPAN 173 (416)
T ss_dssp HHHHHTTT-CSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT--TCCEECSCCSHHHHHHHHHHHCCEE
T ss_pred HHHHHHhC-CCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc--CCCcceeeechhhHhhcccCCCCEE
Confidence 34444443 3578999999 999999999999888999999999999999743 33321 122233322111247899
Q ss_pred EEEEcCCCCCchH------HHHhccccCcEEEEEec
Q psy8015 92 AIHVGAAYPRYPE------IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 92 ~I~i~~~~~~~p~------~l~~~LkpgG~lvi~~~ 121 (165)
+|++....+++++ ++.+.|||||++++...
T Consensus 174 ~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 174 VIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp EEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9999999887763 67899999999999754
No 214
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.32 E-value=5.4e-12 Score=100.70 Aligned_cols=108 Identities=12% Similarity=0.009 Sum_probs=76.8
Q ss_pred CchHHHHHHHHHHhc--CCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhccccc---CCC-CCeEEE--Ecc
Q psy8015 9 SVSGAVAKYVTYLSG--HSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSST---IDP-DHDYDL--IAD 79 (165)
Q Consensus 9 ~~~~~~~~~l~~l~~--~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~---~~~-~nV~~~--~gD 79 (165)
-+++...++.+++.. ..++++|||+ ||+|.++..+++. ++|+++|+++ |+..|+.+. ... .|++++ ++|
T Consensus 63 ~~sR~a~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D 140 (276)
T 2wa2_A 63 AVSRGTAKLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVD 140 (276)
T ss_dssp --CHHHHHHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCC
T ss_pred cCchHHHHHHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCc
Confidence 355666666655542 2578999999 9999999999998 8999999999 655443111 111 179999 899
Q ss_pred CCCCCCCCCCccEEEEcCCCCCc-------------hHHHHhccccCc--EEEEEec
Q psy8015 80 GRASFGDNGPYDAIHVGAAYPRY-------------PEIFIHHLKSGG--RLVIPIG 121 (165)
Q Consensus 80 ~~~~~~~~~~fD~I~i~~~~~~~-------------p~~l~~~LkpgG--~lvi~~~ 121 (165)
+.+ ++ .++||+|+++.+ ... .+.+.+.||||| ++++-+-
T Consensus 141 ~~~-l~-~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 141 VTK-ME-PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp GGG-CC-CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred Hhh-CC-CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 865 34 468999999876 221 234568899999 8888543
No 215
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.31 E-value=9.9e-13 Score=104.69 Aligned_cols=97 Identities=7% Similarity=-0.029 Sum_probs=69.5
Q ss_pred CCCCeEEEE-ccccHHHHHHh----ccC--Cc--EEEEeCCHHHHHhcc--ccc-CCCCCeEEE--EccCCCCC------
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLP----TFI--PN--SFNINVYYYLSGGPL--SST-IDPDHDYDL--IADGRASF------ 84 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la----~~~--~~--V~aiD~~~~~~~~A~--~~~-~~~~nV~~~--~gD~~~~~------ 84 (165)
.++.+|||| ||+|.++..+. ... .+ ++++|.|++|++.|+ .+. .+++|+++. .+++....
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 467899999 99998775332 222 23 399999999999996 322 256677665 44443211
Q ss_pred CCCCCccEEEEcCCCCCchH------HHHhccccCcEEEEEec
Q psy8015 85 GDNGPYDAIHVGAAYPRYPE------IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 85 ~~~~~fD~I~i~~~~~~~p~------~l~~~LkpgG~lvi~~~ 121 (165)
.+.++||+|++....+++++ ++.+.|||||++++...
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 12478999999999987763 57899999999999754
No 216
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.31 E-value=3.4e-12 Score=101.23 Aligned_cols=107 Identities=9% Similarity=-0.053 Sum_probs=74.9
Q ss_pred HHHHHHHHhcC-CCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccCC--C------C---------
Q psy8015 14 VAKYVTYLSGH-SKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTID--P------D--------- 71 (165)
Q Consensus 14 ~~~~l~~l~~~-~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~~--~------~--------- 71 (165)
...+.+++... .++.+|||| ||+|..+..++.. ..+|+++|+|++|++.|+ ++... . .
T Consensus 58 ~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (289)
T 2g72_A 58 LRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKG 137 (289)
T ss_dssp HHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSC
T ss_pred HHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcc
Confidence 44566666431 368999999 9999965555543 569999999999999885 22110 0 0
Q ss_pred -------------CeEEEEccCCCCCC------CCCCccEEEEcCCCCC----ch------HHHHhccccCcEEEEEe
Q psy8015 72 -------------HDYDLIADGRASFG------DNGPYDAIHVGAAYPR----YP------EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 72 -------------nV~~~~gD~~~~~~------~~~~fD~I~i~~~~~~----~p------~~l~~~LkpgG~lvi~~ 120 (165)
.++++.+|+.+..+ +.++||+|++....++ ++ .++.+.|||||++++..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 138 ECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp CCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 15677778866222 1356999999988765 33 25789999999999963
No 217
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.31 E-value=4.3e-12 Score=102.13 Aligned_cols=88 Identities=9% Similarity=0.012 Sum_probs=68.7
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGD 86 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~ 86 (165)
.+....++++.+. ..++++|||+ ||+|.+|..|++...+|+++|+|++|++.|+ .+..+.+|++++.+|+....
T Consensus 27 ~~~i~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~-- 103 (299)
T 2h1r_A 27 NPGILDKIIYAAK-IKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV-- 103 (299)
T ss_dssp CHHHHHHHHHHHC-CCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC--
T ss_pred CHHHHHHHHHhcC-CCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC--
Confidence 3556778888875 4789999999 9999999999998889999999999999996 44456789999999987632
Q ss_pred CCCccEEEEcCCCC
Q psy8015 87 NGPYDAIHVGAAYP 100 (165)
Q Consensus 87 ~~~fD~I~i~~~~~ 100 (165)
..+||+|+++....
T Consensus 104 ~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 104 FPKFDVCTANIPYK 117 (299)
T ss_dssp CCCCSEEEEECCGG
T ss_pred cccCCEEEEcCCcc
Confidence 24799999975543
No 218
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.31 E-value=5.4e-12 Score=100.14 Aligned_cols=106 Identities=14% Similarity=0.051 Sum_probs=76.8
Q ss_pred chHHHHHHHHHHhc--CCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccc-----cCCCCCeEEE--Ecc
Q psy8015 10 VSGAVAKYVTYLSG--HSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSS-----TIDPDHDYDL--IAD 79 (165)
Q Consensus 10 ~~~~~~~~l~~l~~--~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~-----~~~~~nV~~~--~gD 79 (165)
+++...++.+.+.. ..++++|||+ ||+|.++..+++. ++|+++|+++ |+..++.+ ..+ .|++++ ++|
T Consensus 56 ~sR~a~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D 132 (265)
T 2oxt_A 56 VSRGTAKLAWMEERGYVELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRITESYG-WNIVKFKSRVD 132 (265)
T ss_dssp SSTHHHHHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCCCBTT-GGGEEEECSCC
T ss_pred cchHHHHHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhhhccC-CCeEEEecccC
Confidence 45555555555432 3678999999 9999999999998 8999999999 65444311 111 179999 899
Q ss_pred CCCCCCCCCCccEEEEcCCCCC-------------chHHHHhccccCc--EEEEEec
Q psy8015 80 GRASFGDNGPYDAIHVGAAYPR-------------YPEIFIHHLKSGG--RLVIPIG 121 (165)
Q Consensus 80 ~~~~~~~~~~fD~I~i~~~~~~-------------~p~~l~~~LkpgG--~lvi~~~ 121 (165)
+.+ ++ .++||+|+++.+ .. ..+.+.+.||||| .+++-+-
T Consensus 133 ~~~-l~-~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 133 IHT-LP-VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp TTT-SC-CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred HhH-CC-CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 875 33 468999999876 22 1234568999999 8888553
No 219
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.31 E-value=3.2e-12 Score=103.57 Aligned_cols=77 Identities=6% Similarity=-0.075 Sum_probs=64.8
Q ss_pred cCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCC---CCCccEE
Q psy8015 23 GHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGD---NGPYDAI 93 (165)
Q Consensus 23 ~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~---~~~fD~I 93 (165)
...++++|||+ ||+|..|..+|... ++|+++|+++++++.++ ++++|++|++++++|+.+..+. ..+||+|
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~V 178 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYI 178 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEE
Confidence 45889999999 99999999999863 68999999999999996 7778888999999998764332 1579999
Q ss_pred EEcCCC
Q psy8015 94 HVGAAY 99 (165)
Q Consensus 94 ~i~~~~ 99 (165)
+++..+
T Consensus 179 l~D~Pc 184 (309)
T 2b9e_A 179 LLDPSC 184 (309)
T ss_dssp EECCCC
T ss_pred EEcCCc
Confidence 997543
No 220
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.31 E-value=2.3e-11 Score=99.88 Aligned_cols=95 Identities=8% Similarity=-0.042 Sum_probs=77.3
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCC-CCCCCccEEEEcC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASF-GDNGPYDAIHVGA 97 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~-~~~~~fD~I~i~~ 97 (165)
.+..+|||| ||+|..+..+++.. .+|+++|+ +++++.|+ ++..+. ++|+++.+|..+.. +-.++||+|++..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~ 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQ 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEec
Confidence 467899999 99999999999864 47999999 99999996 555565 47999999987642 1126899999999
Q ss_pred CCCCchH--------HHHhccccCcEEEEEe
Q psy8015 98 AYPRYPE--------IFIHHLKSGGRLVIPI 120 (165)
Q Consensus 98 ~~~~~p~--------~l~~~LkpgG~lvi~~ 120 (165)
..++.++ ++.+.|||||++++..
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 8886653 4678999999999865
No 221
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.31 E-value=6.8e-12 Score=102.77 Aligned_cols=102 Identities=10% Similarity=-0.022 Sum_probs=81.2
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCCCCCC
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFGDNGP 89 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~~~~~ 89 (165)
.+++.+. ..++.+|||| ||+|.++..+++.. .+++++|+ +++++.|+ ++..++. +++++.+|..+.++. .
T Consensus 173 ~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~ 248 (374)
T 1qzz_A 173 APADAYD-WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPV--T 248 (374)
T ss_dssp HHHHTSC-CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC--C
T ss_pred HHHHhCC-CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCC--C
Confidence 3444442 3678999999 99999999999875 48999999 99999996 4555665 799999998765543 4
Q ss_pred ccEEEEcCCCCCchH--------HHHhccccCcEEEEEec
Q psy8015 90 YDAIHVGAAYPRYPE--------IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 90 fD~I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~~ 121 (165)
||+|++....++.++ ++.+.|||||++++...
T Consensus 249 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 249 ADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999988876553 46899999999998654
No 222
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.31 E-value=1.6e-11 Score=101.04 Aligned_cols=101 Identities=9% Similarity=-0.015 Sum_probs=81.1
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCCCCCCC
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASFGDNGP 89 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~~~~~~ 89 (165)
.+++.+. ..++.+|||| ||+|.++..+++.. .+++++|+ +++++.|+ +...++ ++|+++.+|....++. .
T Consensus 193 ~l~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~--~ 268 (369)
T 3gwz_A 193 QVAAAYD-FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPD--G 268 (369)
T ss_dssp HHHHHSC-CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCS--S
T ss_pred HHHHhCC-CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCC--C
Confidence 4444442 3678999999 99999999999875 38999999 99999996 455565 5799999998755443 7
Q ss_pred ccEEEEcCCCCCchH--------HHHhccccCcEEEEEe
Q psy8015 90 YDAIHVGAAYPRYPE--------IFIHHLKSGGRLVIPI 120 (165)
Q Consensus 90 fD~I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~ 120 (165)
||+|++....++.++ .+.+.|||||++++..
T Consensus 269 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 269 ADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred ceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 999999988876653 4678999999999964
No 223
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.30 E-value=3.9e-12 Score=101.55 Aligned_cols=97 Identities=16% Similarity=0.077 Sum_probs=76.5
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCC----CCCeEEEEccCCCCCC-CCCCccEEE
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTID----PDHDYDLIADGRASFG-DNGPYDAIH 94 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~----~~nV~~~~gD~~~~~~-~~~~fD~I~ 94 (165)
.++++|||| ||+|..+..+++.. .+|+++|+|+++++.|+ +...+ .++++++.+|+.+.++ ..++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 567899999 99999999999874 68999999999999996 44332 4689999999865322 246899999
Q ss_pred EcCCCCCc----------hHHHHhccccCcEEEEEec
Q psy8015 95 VGAAYPRY----------PEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 95 i~~~~~~~----------p~~l~~~LkpgG~lvi~~~ 121 (165)
++...+.- -+.+.+.|+|||++++...
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 98654422 2357899999999999864
No 224
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.30 E-value=1.6e-11 Score=100.34 Aligned_cols=103 Identities=13% Similarity=-0.024 Sum_probs=81.9
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCCCCCCC
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRASFGDN 87 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~~~~~~ 87 (165)
...+++.+. ..++.+|||| ||+|.++..+++.. .+++++|+ +++++.|+ ++..+..+ ++++.+|..+...
T Consensus 179 ~~~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-- 254 (359)
T 1x19_A 179 IQLLLEEAK-LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY-- 254 (359)
T ss_dssp HHHHHHHCC-CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC--
T ss_pred HHHHHHhcC-CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC--
Confidence 345666653 4678999999 99999999999875 48999999 99999996 55556655 9999999876422
Q ss_pred CCccEEEEcCCCCCchH--------HHHhccccCcEEEEEe
Q psy8015 88 GPYDAIHVGAAYPRYPE--------IFIHHLKSGGRLVIPI 120 (165)
Q Consensus 88 ~~fD~I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~ 120 (165)
..+|+|++....++.++ .+.+.|||||++++..
T Consensus 255 ~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 255 PEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp CCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred CCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 23599999988876653 4688999999998865
No 225
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.28 E-value=9.2e-12 Score=101.24 Aligned_cols=98 Identities=15% Similarity=0.117 Sum_probs=76.2
Q ss_pred CCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc--ccc----CCCCCeEEEEccCCCCCC-CCCCccEEE
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL--SST----IDPDHDYDLIADGRASFG-DNGPYDAIH 94 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~--~~~----~~~~nV~~~~gD~~~~~~-~~~~fD~I~ 94 (165)
.++.+|||| ||+|..+..+++. ..+|+++|+|+++++.|+ ++. ++.++++++.+|+.+..+ ..++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 567899999 9999999999987 368999999999999996 333 223579999999865321 246899999
Q ss_pred EcCCCCC----------chHHHHhccccCcEEEEEecC
Q psy8015 95 VGAAYPR----------YPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 95 i~~~~~~----------~p~~l~~~LkpgG~lvi~~~~ 122 (165)
++...+. +-+.+.+.|||||++++....
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9864331 124578999999999997643
No 226
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.28 E-value=9.1e-12 Score=92.80 Aligned_cols=101 Identities=13% Similarity=-0.016 Sum_probs=72.8
Q ss_pred HHHHHHHHH---hcCCCCCeEEEE-ccccHHHHHHhccC-----------CcEEEEeCCHHHHHhcccccCCCCCeEEE-
Q psy8015 13 AVAKYVTYL---SGHSKRLDCLAL-TSNTKQSTTLPTFI-----------PNSFNINVYYYLSGGPLSSTIDPDHDYDL- 76 (165)
Q Consensus 13 ~~~~~l~~l---~~~~~~~~vLei-~GsG~~t~~la~~~-----------~~V~aiD~~~~~~~~A~~~~~~~~nV~~~- 76 (165)
+.-+++++. ..+.++.+|||+ ||+|.++..+++.. .+|+++|+++.+ ...+++++
T Consensus 6 ~~~kl~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~~~~~~~~~ 76 (196)
T 2nyu_A 6 SAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------PLEGATFLC 76 (196)
T ss_dssp HHHHHHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------CCTTCEEEC
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------cCCCCeEEE
Confidence 444555543 223689999999 99999999999875 679999999832 23578888
Q ss_pred EccCCCCC--------CCCCCccEEEEcCCCCC-----------------chHHHHhccccCcEEEEEecC
Q psy8015 77 IADGRASF--------GDNGPYDAIHVGAAYPR-----------------YPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 77 ~gD~~~~~--------~~~~~fD~I~i~~~~~~-----------------~p~~l~~~LkpgG~lvi~~~~ 122 (165)
.+|..... .+.++||+|+++...+. +.+.+.+.|||||++++....
T Consensus 77 ~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 77 PADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp SCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred eccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 88875421 12357999999765432 123467899999999998653
No 227
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.28 E-value=1.1e-11 Score=100.31 Aligned_cols=94 Identities=6% Similarity=-0.048 Sum_probs=77.8
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCCCCCCCccEEEEcCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASFGDNGPYDAIHVGAA 98 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~~~~~~fD~I~i~~~ 98 (165)
.+..+|||| ||+|..+..+++.. .+++++|+ +++++.|+ ++..++ ++|+++.+|....++. +||+|++...
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~--~~D~v~~~~v 244 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA--GAGGYVLSAV 244 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC--SCSEEEEESC
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC--CCcEEEEehh
Confidence 356899999 99999999998865 47999999 99999996 555565 5799999998755543 7999999998
Q ss_pred CCCchH--------HHHhccccCcEEEEEec
Q psy8015 99 YPRYPE--------IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 99 ~~~~p~--------~l~~~LkpgG~lvi~~~ 121 (165)
.++.++ ++.+.|+|||++++...
T Consensus 245 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 245 LHDWDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 887664 46899999999999654
No 228
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.27 E-value=1.4e-11 Score=98.30 Aligned_cols=97 Identities=15% Similarity=0.115 Sum_probs=72.4
Q ss_pred CCCeEEEE-ccccH----HHHHHhccC------CcEEEEeCCHHHHHhccccc-------------------------CC
Q psy8015 26 KRLDCLAL-TSNTK----QSTTLPTFI------PNSFNINVYYYLSGGPLSST-------------------------ID 69 (165)
Q Consensus 26 ~~~~vLei-~GsG~----~t~~la~~~------~~V~aiD~~~~~~~~A~~~~-------------------------~~ 69 (165)
+..+|||+ ||||. ++..|+... .+|+|+|+|++|++.|+... .|
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999 99997 666676542 27999999999999996210 01
Q ss_pred --------CCCeEEEEccCCCC-CCCCCCccEEEEcCCCCCch--------HHHHhccccCcEEEEEecC
Q psy8015 70 --------PDHDYDLIADGRAS-FGDNGPYDAIHVGAAYPRYP--------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 70 --------~~nV~~~~gD~~~~-~~~~~~fD~I~i~~~~~~~p--------~~l~~~LkpgG~lvi~~~~ 122 (165)
.++|+|.++|..+. ++..++||+|+|.....+++ ..+.+.|+|||.|++-..+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE 254 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSE 254 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 03699999998763 33346899999987765443 2468999999999985543
No 229
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.27 E-value=1.6e-11 Score=92.91 Aligned_cols=91 Identities=11% Similarity=0.023 Sum_probs=71.4
Q ss_pred HHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEE
Q psy8015 15 AKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAI 93 (165)
Q Consensus 15 ~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I 93 (165)
..+++.+....++.+|||+ ||+|.++..++ .+|+++|+++. +++++.+|+.+...+.++||+|
T Consensus 56 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~-------------~~~~~~~d~~~~~~~~~~fD~v 119 (215)
T 2zfu_A 56 DRIARDLRQRPASLVVADFGCGDCRLASSIR---NPVHCFDLASL-------------DPRVTVCDMAQVPLEDESVDVA 119 (215)
T ss_dssp HHHHHHHHTSCTTSCEEEETCTTCHHHHHCC---SCEEEEESSCS-------------STTEEESCTTSCSCCTTCEEEE
T ss_pred HHHHHHHhccCCCCeEEEECCcCCHHHHHhh---ccEEEEeCCCC-------------CceEEEeccccCCCCCCCEeEE
Confidence 3467777655678999999 99999998874 78999999987 5678889987633345789999
Q ss_pred EEcCCCCCc-----hHHHHhccccCcEEEEEec
Q psy8015 94 HVGAAYPRY-----PEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 94 ~i~~~~~~~-----p~~l~~~LkpgG~lvi~~~ 121 (165)
++....+.. .+++.+.|+|||++++...
T Consensus 120 ~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 120 VFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp EEESCCCSSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEehhccccCHHHHHHHHHHhCCCCeEEEEEEc
Confidence 998887531 2467899999999999653
No 230
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.27 E-value=1.6e-11 Score=100.11 Aligned_cols=102 Identities=11% Similarity=0.030 Sum_probs=80.7
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCCCCCC
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFGDNGP 89 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~~~~~ 89 (165)
.+++.+. ..++.+|||| ||+|.++..+++.. .+++++|+ +++++.|+ ++..+.. +++++.+|..+.++. .
T Consensus 174 ~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~ 249 (360)
T 1tw3_A 174 APAAAYD-WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPR--K 249 (360)
T ss_dssp HHHHHSC-CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSS--C
T ss_pred HHHHhCC-CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCC--C
Confidence 4455553 3678999999 99999999999875 37889999 99999996 4555664 799999998765543 4
Q ss_pred ccEEEEcCCCCCchH--------HHHhccccCcEEEEEec
Q psy8015 90 YDAIHVGAAYPRYPE--------IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 90 fD~I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~~ 121 (165)
||+|++....++.++ ++.+.|||||++++...
T Consensus 250 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 250 ADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 999999988876553 46899999999998643
No 231
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.27 E-value=1.1e-11 Score=102.98 Aligned_cols=91 Identities=12% Similarity=-0.062 Sum_probs=69.5
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCCCCCCccEEEEcCC-
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFGDNGPYDAIHVGAA- 98 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~~~~~fD~I~i~~~- 98 (165)
.++++|||| ||||.++..+|+.+ .+|+|+|.++ |++.|+ .+..|+. +|+++++|..+... .++||+|++...
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l-pe~~DvivsE~~~ 159 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL-PEQVDAIVSEWMG 159 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC-SSCEEEEECCCCB
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC-CccccEEEeeccc
Confidence 378999999 99999999888875 6899999996 888886 5566775 49999999876322 368999987322
Q ss_pred --C-C-CchH----HHHhccccCcEEE
Q psy8015 99 --Y-P-RYPE----IFIHHLKSGGRLV 117 (165)
Q Consensus 99 --~-~-~~p~----~l~~~LkpgG~lv 117 (165)
. . .+.+ ...++|||||+++
T Consensus 160 ~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 160 YGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ccccccchhhhHHHHHHhhCCCCceEC
Confidence 1 1 2322 4468999999875
No 232
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.26 E-value=2.1e-11 Score=98.19 Aligned_cols=105 Identities=8% Similarity=0.022 Sum_probs=81.8
Q ss_pred HHHHHHHHhcC--CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCC
Q psy8015 14 VAKYVTYLSGH--SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFG 85 (165)
Q Consensus 14 ~~~~l~~l~~~--~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~ 85 (165)
...+++.+. . .++.+|||+ ||+|..+..+++.. .+++++|++ .+++.|+ ++..++. +++++.+|..+...
T Consensus 152 ~~~~~~~~~-~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 229 (335)
T 2r3s_A 152 AQLIAQLVN-ENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY 229 (335)
T ss_dssp HHHHHHHHT-C--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC
T ss_pred HHHHHHhcc-cccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC
Confidence 345666663 3 578999999 99999999999874 589999999 9999996 4445654 59999999876322
Q ss_pred CCCCccEEEEcCCCCCch--------HHHHhccccCcEEEEEec
Q psy8015 86 DNGPYDAIHVGAAYPRYP--------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 86 ~~~~fD~I~i~~~~~~~p--------~~l~~~LkpgG~lvi~~~ 121 (165)
...||+|++....++.+ ..+.+.|+|||++++...
T Consensus 230 -~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 230 -GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp -CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEee
Confidence 23499999988877663 246899999999998654
No 233
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.26 E-value=1.2e-11 Score=110.06 Aligned_cols=108 Identities=13% Similarity=0.048 Sum_probs=82.5
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCC--CeEEEEccCCCCCC-
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPD--HDYDLIADGRASFG- 85 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~--nV~~~~gD~~~~~~- 85 (165)
...+++..+ .++++|||+ ||||.++..++... .+|+++|+|+.+++.|+ ++..|++ +++++++|+.+.++
T Consensus 529 ~~r~~l~~~---~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~ 605 (703)
T 3v97_A 529 IARRMLGQM---SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE 605 (703)
T ss_dssp HHHHHHHHH---CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHH
T ss_pred HHHHHHHHh---cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHh
Confidence 344444443 478999999 99999999988765 46999999999999996 5556665 79999999876332
Q ss_pred CCCCccEEEEcCCCC----------C-------chHHHHhccccCcEEEEEecCC
Q psy8015 86 DNGPYDAIHVGAAYP----------R-------YPEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 86 ~~~~fD~I~i~~~~~----------~-------~p~~l~~~LkpgG~lvi~~~~~ 123 (165)
..++||+|+++...- . +...+.+.|+|||+|++.+...
T Consensus 606 ~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 606 ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp CCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred cCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 246899999986431 1 1235679999999999988763
No 234
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.26 E-value=5.2e-12 Score=109.73 Aligned_cols=95 Identities=12% Similarity=-0.032 Sum_probs=78.9
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCC--CCCCCCccEEEEcCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRAS--FGDNGPYDAIHVGAAY 99 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~--~~~~~~fD~I~i~~~~ 99 (165)
.++.+|||| ||+|.++..||+.+.+|++||.++++++.|| .++.|..||+++++++.+. ..+.++||+|++...+
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 457899999 9999999999999999999999999999997 4445656899999998653 1235789999999999
Q ss_pred CCchH--------HHHhccccCcEEEEE
Q psy8015 100 PRYPE--------IFIHHLKSGGRLVIP 119 (165)
Q Consensus 100 ~~~p~--------~l~~~LkpgG~lvi~ 119 (165)
+++++ .+++.|+++|+.++.
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred hcCCCHHHHHHHHHHHHHhccccceeeE
Confidence 88874 356778888887764
No 235
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.23 E-value=2.2e-10 Score=86.08 Aligned_cols=101 Identities=8% Similarity=-0.090 Sum_probs=74.0
Q ss_pred HHHHHHHHHhc--CCCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCC
Q psy8015 13 AVAKYVTYLSG--HSKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGD 86 (165)
Q Consensus 13 ~~~~~l~~l~~--~~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~ 86 (165)
...+++..+.. ..++.+|||+ ||+|.++..+++.. .+|+++|+++++++.|+ .+..+. +++++++|+.+ ++
T Consensus 34 ~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~-~~- 110 (207)
T 1wy7_A 34 AASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSE-FN- 110 (207)
T ss_dssp HHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGG-CC-
T ss_pred HHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHH-cC-
Confidence 34455544431 2478999999 99999999999874 57999999999999996 555566 89999999876 33
Q ss_pred CCCccEEEEcCCCCCch--------HHHHhccccCcEEEEEe
Q psy8015 87 NGPYDAIHVGAAYPRYP--------EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 87 ~~~fD~I~i~~~~~~~p--------~~l~~~LkpgG~lvi~~ 120 (165)
.+||+|+++....... +.+.+.| |.+++.+
T Consensus 111 -~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l---~~~~~~~ 148 (207)
T 1wy7_A 111 -SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS---DVVYSIH 148 (207)
T ss_dssp -CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC---SEEEEEE
T ss_pred -CCCCEEEEcCCCccccCCchHHHHHHHHHhc---CcEEEEE
Confidence 4899999987654321 3344555 5555555
No 236
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.23 E-value=5e-11 Score=97.21 Aligned_cols=100 Identities=7% Similarity=-0.106 Sum_probs=76.8
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCC-CCeEEEEccCCCCCCCCCCcc
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDP-DHDYDLIADGRASFGDNGPYD 91 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~-~nV~~~~gD~~~~~~~~~~fD 91 (165)
.+++.+. ..++.+|||| ||+|..+..+++... +++++|+ +.+++.++.+..+. ++++++.+|..+..+ +||
T Consensus 175 ~~~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p---~~D 249 (348)
T 3lst_A 175 ILARAGD-FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVARHRLDAPDVAGRWKVVEGDFLREVP---HAD 249 (348)
T ss_dssp HHHHHSC-CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHTTCCCCCGGGTTSEEEEECCTTTCCC---CCS
T ss_pred HHHHhCC-ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhhcccccccCCCCCeEEEecCCCCCCC---CCc
Confidence 4445543 4678999999 999999999998763 6899999 55555444444444 469999999875444 799
Q ss_pred EEEEcCCCCCchH--------HHHhccccCcEEEEEe
Q psy8015 92 AIHVGAAYPRYPE--------IFIHHLKSGGRLVIPI 120 (165)
Q Consensus 92 ~I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~ 120 (165)
+|++....++.++ ++.+.|||||++++..
T Consensus 250 ~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 250 VHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred EEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999998887664 4789999999999865
No 237
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.23 E-value=2.4e-11 Score=98.18 Aligned_cols=101 Identities=9% Similarity=-0.032 Sum_probs=79.2
Q ss_pred HHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCCCCCC
Q psy8015 15 AKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASFGDNG 88 (165)
Q Consensus 15 ~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~~~~~ 88 (165)
..+++.+. ..+ .+|||+ ||+|..+..+++.. .+++++|+ +++++.|+ ++..++ ++++++.+|..+..+ .
T Consensus 158 ~~~~~~~~-~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~ 232 (334)
T 2ip2_A 158 HEIPRLLD-FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEVP--S 232 (334)
T ss_dssp HHHHHHSC-CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCCC--S
T ss_pred HHHHHhCC-CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCCC--C
Confidence 34555442 345 899999 99999999999874 48999999 99999996 433343 479999999877443 5
Q ss_pred CccEEEEcCCCCCchH--------HHHhccccCcEEEEEe
Q psy8015 89 PYDAIHVGAAYPRYPE--------IFIHHLKSGGRLVIPI 120 (165)
Q Consensus 89 ~fD~I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~ 120 (165)
.||+|++....++.++ .+.+.|+|||++++..
T Consensus 233 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 233 NGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp SCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 7999999988875542 4689999999999974
No 238
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.23 E-value=1.4e-11 Score=97.26 Aligned_cols=84 Identities=13% Similarity=-0.018 Sum_probs=66.8
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC-CCC--
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS-FGD-- 86 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~-~~~-- 86 (165)
+....++++.+. ..++++|||| ||+|++|..|++.+.+|+++|+|++|++.++.+....+|++++++|+.+. +++
T Consensus 15 ~~i~~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~ 93 (255)
T 3tqs_A 15 SFVLQKIVSAIH-PQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVK 93 (255)
T ss_dssp HHHHHHHHHHHC-CCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSC
T ss_pred HHHHHHHHHhcC-CCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhc
Confidence 456778888885 4789999999 99999999999998999999999999999962222256899999999763 222
Q ss_pred -CCCccEEEEc
Q psy8015 87 -NGPYDAIHVG 96 (165)
Q Consensus 87 -~~~fD~I~i~ 96 (165)
.++|| |+.+
T Consensus 94 ~~~~~~-vv~N 103 (255)
T 3tqs_A 94 TDKPLR-VVGN 103 (255)
T ss_dssp CSSCEE-EEEE
T ss_pred cCCCeE-EEec
Confidence 24688 5553
No 239
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.23 E-value=2e-11 Score=104.22 Aligned_cols=99 Identities=10% Similarity=-0.078 Sum_probs=75.0
Q ss_pred HHHHHhcCCCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcc--cccCCC-CCeEEEEccCCCCCCCCCCcc
Q psy8015 17 YVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPL--SSTIDP-DHDYDLIADGRASFGDNGPYD 91 (165)
Q Consensus 17 ~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~--~~~~~~-~nV~~~~gD~~~~~~~~~~fD 91 (165)
+++.+.. .++.+|||| ||+|.++..+++.. .+|+++|+++ +++.|+ .+..++ ++|+++.+|..+. +..++||
T Consensus 150 il~~l~~-~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~-~~~~~fD 226 (480)
T 3b3j_A 150 ILQNHTD-FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV-SLPEQVD 226 (480)
T ss_dssp HHHTGGG-TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSCEE
T ss_pred HHHhhhh-cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC-ccCCCeE
Confidence 4444432 578999999 99999999999864 5899999998 988886 556677 5799999998763 2235899
Q ss_pred EEEEcCCCCC-----chH---HHHhccccCcEEEE
Q psy8015 92 AIHVGAAYPR-----YPE---IFIHHLKSGGRLVI 118 (165)
Q Consensus 92 ~I~i~~~~~~-----~p~---~l~~~LkpgG~lvi 118 (165)
+|+++..... +.+ .+.+.|||||++++
T Consensus 227 ~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 227 IIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp EEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 9998654221 122 34689999999985
No 240
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.22 E-value=2.3e-11 Score=99.00 Aligned_cols=103 Identities=11% Similarity=-0.006 Sum_probs=80.2
Q ss_pred HHHHHHhcCCC-CCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCC-CC
Q psy8015 16 KYVTYLSGHSK-RLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFG-DN 87 (165)
Q Consensus 16 ~~l~~l~~~~~-~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~-~~ 87 (165)
.+++.+.. .+ +.+|||| ||+|.++..+++.. .+++++|+ +++++.|+ .+..+.. +++++.+|..+..+ ..
T Consensus 169 ~~l~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 246 (352)
T 3mcz_A 169 DVVSELGV-FARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEG 246 (352)
T ss_dssp HHHHTCGG-GTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTT
T ss_pred HHHHhCCC-cCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCC
Confidence 34444432 45 8899999 99999999999875 48999999 88999986 4555654 59999999876431 23
Q ss_pred CCccEEEEcCCCCCchH--------HHHhccccCcEEEEEe
Q psy8015 88 GPYDAIHVGAAYPRYPE--------IFIHHLKSGGRLVIPI 120 (165)
Q Consensus 88 ~~fD~I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~ 120 (165)
+.||+|++....++.++ .+.+.|||||++++..
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 247 GAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp CCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 56999999988886654 4679999999999865
No 241
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.22 E-value=7e-11 Score=88.64 Aligned_cols=105 Identities=9% Similarity=0.005 Sum_probs=72.5
Q ss_pred HHHHHHHHHHh--cCCCCCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCC
Q psy8015 12 GAVAKYVTYLS--GHSKRLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDN 87 (165)
Q Consensus 12 ~~~~~~l~~l~--~~~~~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~ 87 (165)
....+++..+. ...++.+|||+ ||+|.++..+++.. .+|+++|+++++++.|+.+. .+++++++|+.+ ++
T Consensus 35 ~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~---~~~~~~~~d~~~-~~-- 108 (200)
T 1ne2_A 35 STAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNC---GGVNFMVADVSE-IS-- 108 (200)
T ss_dssp HHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHC---TTSEEEECCGGG-CC--
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhc---CCCEEEECcHHH-CC--
Confidence 34445555443 23478999999 99999999999874 47999999999999997322 189999999876 33
Q ss_pred CCccEEEEcCCCCCchH-----HHHhccccCcEEEEEecC
Q psy8015 88 GPYDAIHVGAAYPRYPE-----IFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 88 ~~fD~I~i~~~~~~~p~-----~l~~~LkpgG~lvi~~~~ 122 (165)
++||+|+++...+...+ .+.+.++..|.+++.+..
T Consensus 109 ~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~g~~~~~~~~ 148 (200)
T 1ne2_A 109 GKYDTWIMNPPFGSVVKHSDRAFIDKAFETSMWIYSIGNA 148 (200)
T ss_dssp CCEEEEEECCCC-------CHHHHHHHHHHEEEEEEEEEG
T ss_pred CCeeEEEECCCchhccCchhHHHHHHHHHhcCcEEEEEcC
Confidence 68999999987654432 222333333666666644
No 242
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.21 E-value=5.7e-12 Score=104.72 Aligned_cols=96 Identities=6% Similarity=-0.076 Sum_probs=76.3
Q ss_pred CCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccC---------------CCCCeEEEEccCCCCCC
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTI---------------DPDHDYDLIADGRASFG 85 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~---------------~~~nV~~~~gD~~~~~~ 85 (165)
++.+|||+ ||||..+..++... .+|+++|+++++++.|+ ++.. +++|++++++|+...+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 68999999 99999999999874 47999999999999996 5444 67679999999865322
Q ss_pred C-CCCccEEEEcCCCC--CchHHHHhccccCcEEEEEec
Q psy8015 86 D-NGPYDAIHVGAAYP--RYPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 86 ~-~~~fD~I~i~~~~~--~~p~~l~~~LkpgG~lvi~~~ 121 (165)
. ..+||+|+++.... .+.+...+.|||||++++.+.
T Consensus 127 ~~~~~fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt~t 165 (378)
T 2dul_A 127 ERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTAT 165 (378)
T ss_dssp HSTTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hccCCCCEEEeCCCCCHHHHHHHHHHhcCCCCEEEEEee
Confidence 1 25799999886332 344667789999999888763
No 243
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.21 E-value=5.7e-12 Score=105.22 Aligned_cols=97 Identities=6% Similarity=-0.043 Sum_probs=77.8
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcc--cccCCCCC--eEEEEccCCCCCC-C-CCCccEEE
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPL--SSTIDPDH--DYDLIADGRASFG-D-NGPYDAIH 94 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~--~~~~~~~n--V~~~~gD~~~~~~-~-~~~fD~I~ 94 (165)
+++.+|||+ ||+|.++..++... ++|+++|+++++++.++ ++..+++| ++++.+|+.+.+. . .++||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 468999999 99999999999853 58999999999999996 66678876 9999999865332 2 35799999
Q ss_pred EcCCCC--CchHHHHhccccCcEEEEEec
Q psy8015 95 VGAAYP--RYPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 95 i~~~~~--~~p~~l~~~LkpgG~lvi~~~ 121 (165)
++.-.. .+.+...+.|+|||+|++.+.
T Consensus 131 lDP~g~~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 131 LDPFGTPVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp ECCSSCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECCCcCHHHHHHHHHHHhCCCCEEEEEec
Confidence 997211 244566788999999999874
No 244
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.19 E-value=6.9e-11 Score=94.13 Aligned_cols=98 Identities=8% Similarity=-0.082 Sum_probs=73.8
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC-CCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS-FGDNG 88 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~-~~~~~ 88 (165)
+....++++.+. ..++ +|||| ||+|.+|..|++.+.+|+++|+|++|++.++.+.. ..|++++++|+.+. +++..
T Consensus 33 ~~i~~~Iv~~~~-~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~-~~~v~vi~~D~l~~~~~~~~ 109 (271)
T 3fut_A 33 EAHLRRIVEAAR-PFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS-GLPVRLVFQDALLYPWEEVP 109 (271)
T ss_dssp HHHHHHHHHHHC-CCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT-TSSEEEEESCGGGSCGGGSC
T ss_pred HHHHHHHHHhcC-CCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC-CCCEEEEECChhhCChhhcc
Confidence 456778888885 4788 99999 99999999999999999999999999999963221 25899999999763 22223
Q ss_pred CccEEEEcCCCCCchHHHHhccc
Q psy8015 89 PYDAIHVGAAYPRYPEIFIHHLK 111 (165)
Q Consensus 89 ~fD~I~i~~~~~~~p~~l~~~Lk 111 (165)
.||.|+.+-.+..-.+-++++|.
T Consensus 110 ~~~~iv~NlPy~iss~il~~ll~ 132 (271)
T 3fut_A 110 QGSLLVANLPYHIATPLVTRLLK 132 (271)
T ss_dssp TTEEEEEEECSSCCHHHHHHHHH
T ss_pred CccEEEecCcccccHHHHHHHhc
Confidence 68988877655433333444443
No 245
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.17 E-value=1.4e-10 Score=95.43 Aligned_cols=97 Identities=12% Similarity=0.108 Sum_probs=76.6
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccE
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDA 92 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~ 92 (165)
.+++.+....++.+|||| ||+|..+..+++... +++++|+ +.+++.|+. .++++++.+|..+.++ .||+
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~~~~---~~D~ 270 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP----LSGIEHVGGDMFASVP---QGDA 270 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----CTTEEEEECCTTTCCC---CEEE
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh----cCCCEEEeCCcccCCC---CCCE
Confidence 344444223567899999 999999999998764 6788899 999998863 2579999999876433 2999
Q ss_pred EEEcCCCCCchH--------HHHhccccCcEEEEEe
Q psy8015 93 IHVGAAYPRYPE--------IFIHHLKSGGRLVIPI 120 (165)
Q Consensus 93 I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~ 120 (165)
|++....++.++ ++.+.|||||++++..
T Consensus 271 v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 271 MILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999998886653 4689999999999863
No 246
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.17 E-value=1e-10 Score=98.66 Aligned_cols=106 Identities=9% Similarity=0.024 Sum_probs=80.0
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC---------------CcEEEEeCCHHHHHhcc--cccCCCC--Ce
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI---------------PNSFNINVYYYLSGGPL--SSTIDPD--HD 73 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~---------------~~V~aiD~~~~~~~~A~--~~~~~~~--nV 73 (165)
+..|++.+. ..++.+|||. ||||.+...+++.. .+++++|+++.+++.|+ +...|.. ++
T Consensus 160 ~~~mv~~l~-~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~ 238 (445)
T 2okc_A 160 IQAMVDCIN-PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRS 238 (445)
T ss_dssp HHHHHHHHC-CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCC
T ss_pred HHHHHHHhC-CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCC
Confidence 445555553 4678999999 99999998887642 57999999999999996 4445664 78
Q ss_pred EEEEccCCCCCCCCCCccEEEEcCCCCC-----------------------chHHHHhccccCcEEEEEec
Q psy8015 74 YDLIADGRASFGDNGPYDAIHVGAAYPR-----------------------YPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 74 ~~~~gD~~~~~~~~~~fD~I~i~~~~~~-----------------------~p~~l~~~LkpgG~lvi~~~ 121 (165)
.++++|...... ..+||+|+.+..... ....+.+.|||||+++++++
T Consensus 239 ~i~~gD~l~~~~-~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 239 PIVCEDSLEKEP-STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp SEEECCTTTSCC-SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEeeCCCCCCcc-cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 899999876433 348999999855431 12456799999999988774
No 247
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.15 E-value=1.8e-12 Score=101.11 Aligned_cols=110 Identities=12% Similarity=0.022 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCC-CCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASF-GDNG 88 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~-~~~~ 88 (165)
+....++++.+. ..++++|||+ ||+|.++..+++...+|+++|+|+++++.|+.+..+.+|++++++|+.+.. +..+
T Consensus 15 ~~~~~~i~~~~~-~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~ 93 (245)
T 1yub_A 15 EKVLNQIIKQLN-LKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQ 93 (245)
T ss_dssp TTTHHHHHHHCC-CCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSS
T ss_pred HHHHHHHHHhcC-CCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCC
Confidence 445667777774 4788999999 999999999999889999999999999999632224468999999987632 2235
Q ss_pred CccEEEEcCCCC-----------------Cch----HHHHhccccCcEEEEEecC
Q psy8015 89 PYDAIHVGAAYP-----------------RYP----EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 89 ~fD~I~i~~~~~-----------------~~p----~~l~~~LkpgG~lvi~~~~ 122 (165)
+| .|+.+.... ... +.+.+.|+|||++++....
T Consensus 94 ~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~~ 147 (245)
T 1yub_A 94 RY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLHT 147 (245)
T ss_dssp EE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTTT
T ss_pred Cc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhee
Confidence 78 566653221 111 4578999999998886654
No 248
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.15 E-value=2.3e-10 Score=94.24 Aligned_cols=89 Identities=11% Similarity=0.056 Sum_probs=73.2
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPR 101 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~ 101 (165)
.+..+|||| ||+|..+..+++.. .+++++|+ +++++.|+. .++++++.+|..+.+++ + |+|++....++
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~~~p~-~--D~v~~~~vlh~ 273 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA----FSGVEHLGGDMFDGVPK-G--DAIFIKWICHD 273 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----CTTEEEEECCTTTCCCC-C--SEEEEESCGGG
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh----cCCCEEEecCCCCCCCC-C--CEEEEechhhc
Confidence 467899999 99999999999875 37899999 999988863 25899999998875553 3 99999998886
Q ss_pred chH--------HHHhccccCcEEEEEec
Q psy8015 102 YPE--------IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 102 ~p~--------~l~~~LkpgG~lvi~~~ 121 (165)
.++ ++.+.|||||++++...
T Consensus 274 ~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 274 WSDEHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp BCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 653 46789999999998653
No 249
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.15 E-value=3.3e-11 Score=100.78 Aligned_cols=97 Identities=12% Similarity=0.104 Sum_probs=70.9
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-cc------ccHHHHHHhcc---CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TS------NTKQSTTLPTF---IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA 82 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~G------sG~~t~~la~~---~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~ 82 (165)
...+++..+. .++.+|||| || +|..+..+++. ..+|+++|++++|.. ..+|++++++|+.+
T Consensus 205 ~Ye~lL~~l~--~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~-------~~~rI~fv~GDa~d 275 (419)
T 3sso_A 205 HYDRHFRDYR--NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV-------DELRIRTIQGDQND 275 (419)
T ss_dssp HHHHHHGGGT--TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG-------CBTTEEEEECCTTC
T ss_pred HHHHHHHhhc--CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh-------cCCCcEEEEecccc
Confidence 4445555443 467999999 99 67677666653 368999999999831 23689999999875
Q ss_pred CCCC------CCCccEEEEcCCCCCch------HHHHhccccCcEEEEE
Q psy8015 83 SFGD------NGPYDAIHVGAAYPRYP------EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 83 ~~~~------~~~fD~I~i~~~~~~~p------~~l~~~LkpgG~lvi~ 119 (165)
.... .++||+|++++. +..+ +++++.|||||++++.
T Consensus 276 lpf~~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 276 AEFLDRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHHHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cchhhhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcCCCeEEEEE
Confidence 2111 378999998765 4333 3678999999999985
No 250
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.14 E-value=8e-11 Score=98.24 Aligned_cols=111 Identities=6% Similarity=-0.144 Sum_probs=83.3
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCC----------------------------------------cE
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIP----------------------------------------NS 50 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~----------------------------------------~V 50 (165)
...+.|+.+. ...++..|||. ||||.++..+|.... +|
T Consensus 188 ~lAa~ll~l~-~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 188 TMAAALVLLT-SWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHS-CCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHh-CCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 3445666555 45788999999 999999988886542 49
Q ss_pred EEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCCCCCCCCCccEEEEcCCCCC-ch---------HHHHhcccc--CcE
Q psy8015 51 FNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRASFGDNGPYDAIHVGAAYPR-YP---------EIFIHHLKS--GGR 115 (165)
Q Consensus 51 ~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~~~~~~~~fD~I~i~~~~~~-~p---------~~l~~~Lkp--gG~ 115 (165)
+++|+|++|++.|+ ++..|+.+ ++++++|+.+... ..+||+|+++..+.. +. ..+.+.||+ ||+
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~-~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 345 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWS 345 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC-CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC-CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCE
Confidence 99999999999996 66678764 9999999977443 358999999876532 21 123445555 999
Q ss_pred EEEEecCCC
Q psy8015 116 LVIPIGDTK 124 (165)
Q Consensus 116 lvi~~~~~~ 124 (165)
+++...+..
T Consensus 346 ~~iit~~~~ 354 (393)
T 3k0b_A 346 VYVLTSYEL 354 (393)
T ss_dssp EEEEECCTT
T ss_pred EEEEECCHH
Confidence 999887654
No 251
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.14 E-value=3.9e-10 Score=92.81 Aligned_cols=97 Identities=10% Similarity=0.059 Sum_probs=77.1
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccE
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDA 92 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~ 92 (165)
.+++.+....+..+|||| ||+|..+..+++.. .+++++|+ +++++.|+. .++++++.+|..+.++. + |+
T Consensus 191 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~D~~~~~p~-~--D~ 262 (364)
T 3p9c_A 191 KLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----FPGVTHVGGDMFKEVPS-G--DT 262 (364)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----CTTEEEEECCTTTCCCC-C--SE
T ss_pred HHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----cCCeEEEeCCcCCCCCC-C--CE
Confidence 455554324578999999 99999999999865 37999999 999988863 25899999998775553 3 99
Q ss_pred EEEcCCCCCchH--------HHHhccccCcEEEEEe
Q psy8015 93 IHVGAAYPRYPE--------IFIHHLKSGGRLVIPI 120 (165)
Q Consensus 93 I~i~~~~~~~p~--------~l~~~LkpgG~lvi~~ 120 (165)
|++....++.++ ++.+.|||||++++..
T Consensus 263 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 263 ILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 999998886643 4678999999999964
No 252
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.13 E-value=5.4e-10 Score=89.16 Aligned_cols=109 Identities=15% Similarity=0.085 Sum_probs=76.3
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccc---cHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCC--
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSN---TKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRAS-- 83 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~Gs---G~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~-- 83 (165)
..+.+.+|.....-.+|||| ||+ |.....+.+.. .+|+++|.|+.|++.|| +...+..+++++++|..+.
T Consensus 66 l~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~ 145 (277)
T 3giw_A 66 MNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPAS 145 (277)
T ss_dssp HHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHH
T ss_pred HHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhh
Confidence 45667777532345799999 997 34444333333 58999999999999997 4333345799999998653
Q ss_pred -CCC---CCCcc-----EEEEcCCCCCchH---------HHHhccccCcEEEEEecC
Q psy8015 84 -FGD---NGPYD-----AIHVGAAYPRYPE---------IFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 84 -~~~---~~~fD-----~I~i~~~~~~~p~---------~l~~~LkpgG~lvi~~~~ 122 (165)
+.. .+.|| +|++++.++++++ .+.+.|+|||+|++....
T Consensus 146 ~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 146 ILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp HHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred hhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 110 13344 6888888887764 357789999999998654
No 253
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.11 E-value=3.9e-10 Score=93.56 Aligned_cols=102 Identities=16% Similarity=0.081 Sum_probs=77.5
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCC
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDN 87 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~ 87 (165)
..+..|++++.. .++.+|||+ ||+|.++..+++. ..+|+++|+++.+++.| .+++++++|.... ...
T Consensus 26 ~l~~~~~~~~~~-~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------~~~~~~~~D~~~~-~~~ 96 (421)
T 2ih2_A 26 EVVDFMVSLAEA-PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------PWAEGILADFLLW-EPG 96 (421)
T ss_dssp HHHHHHHHHCCC-CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------TTEEEEESCGGGC-CCS
T ss_pred HHHHHHHHhhcc-CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------CCCcEEeCChhhc-Ccc
Confidence 345556666642 467899999 9999999999874 36899999999999877 4789999998763 334
Q ss_pred CCccEEEEcCCCC---C-------c-------------------------hHHHHhccccCcEEEEEecC
Q psy8015 88 GPYDAIHVGAAYP---R-------Y-------------------------PEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 88 ~~fD~I~i~~~~~---~-------~-------------------------p~~l~~~LkpgG~lvi~~~~ 122 (165)
++||+|+++.... . + .+.+.+.|+|||++++.+..
T Consensus 97 ~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 97 EAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp SCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 6899999974331 1 1 22457899999999998754
No 254
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.10 E-value=6.7e-10 Score=87.22 Aligned_cols=70 Identities=10% Similarity=0.042 Sum_probs=60.0
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS 83 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~ 83 (165)
+....++++.+. ..++++|||| ||+|.+|..+++. ..+|+++|+|++|++.++.+ +..|++++++|+.+.
T Consensus 17 ~~i~~~iv~~~~-~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~--~~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 17 EGVLKKIAEELN-IEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI--GDERLEVINEDASKF 88 (249)
T ss_dssp HHHHHHHHHHTT-CCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS--CCTTEEEECSCTTTC
T ss_pred HHHHHHHHHhcC-CCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc--cCCCeEEEEcchhhC
Confidence 456778888875 4789999999 9999999999998 48999999999999999744 456899999999763
No 255
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.10 E-value=1.7e-10 Score=95.19 Aligned_cols=99 Identities=14% Similarity=0.103 Sum_probs=74.9
Q ss_pred CCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--cccCC---C-----CCeEEEEccCCCCCC----CCCC
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SSTID---P-----DHDYDLIADGRASFG----DNGP 89 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~~~---~-----~nV~~~~gD~~~~~~----~~~~ 89 (165)
++++||+| +|+|+++..+++. ..+|+++|+|+++++.|| +..++ + ++++++.+|+.+-+. ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 46899999 9999999987765 368999999999999997 44321 1 269999999976443 2468
Q ss_pred ccEEEEcCCC-C--Cch---------HHH----HhccccCcEEEEEecCCC
Q psy8015 90 YDAIHVGAAY-P--RYP---------EIF----IHHLKSGGRLVIPIGDTK 124 (165)
Q Consensus 90 fD~I~i~~~~-~--~~p---------~~l----~~~LkpgG~lvi~~~~~~ 124 (165)
||+|+++... + ..| +.+ .+.|+|||++++..+...
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~ 318 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVN 318 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETT
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcc
Confidence 9999999754 3 112 233 689999999999876543
No 256
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.10 E-value=3.4e-11 Score=100.98 Aligned_cols=85 Identities=12% Similarity=-0.032 Sum_probs=67.8
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccC--CCCCeEEEEccCCCCCCC
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTI--DPDHDYDLIADGRASFGD 86 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~--~~~nV~~~~gD~~~~~~~ 86 (165)
..++++...+. .++.+|||+ ||+|+.+..||+...+|+++|+|++|++.|+ ++.+ |++|++++++|+.+.++.
T Consensus 81 e~vA~~~a~~l--~~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~ 158 (410)
T 3ll7_A 81 AVTSSYKSRFI--REGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPL 158 (410)
T ss_dssp HHHHHHGGGGS--CTTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHH
T ss_pred HHHHHHHHHhc--CCCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhh
Confidence 34555544332 358999999 9999999999999899999999999999996 5555 778899999999764332
Q ss_pred --CCCccEEEEcCC
Q psy8015 87 --NGPYDAIHVGAA 98 (165)
Q Consensus 87 --~~~fD~I~i~~~ 98 (165)
..+||+||++..
T Consensus 159 ~~~~~fDvV~lDPP 172 (410)
T 3ll7_A 159 IKTFHPDYIYVDPA 172 (410)
T ss_dssp HHHHCCSEEEECCE
T ss_pred ccCCCceEEEECCC
Confidence 258999999843
No 257
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.08 E-value=6e-10 Score=86.95 Aligned_cols=84 Identities=14% Similarity=0.035 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCC-CCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASF-GDNG 88 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~-~~~~ 88 (165)
+....++++.+. ..++++|||| ||+|.+|..+++.+.+|+++|+|++|++.|+.+....+|++++++|+.+.. ++..
T Consensus 16 ~~~~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~ 94 (244)
T 1qam_A 16 KHNIDKIMTNIR-LNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQ 94 (244)
T ss_dssp HHHHHHHHTTCC-CCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSC
T ss_pred HHHHHHHHHhCC-CCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCC
Confidence 455666776663 4688999999 999999999999889999999999999999732223468999999987632 2223
Q ss_pred CccEEEEc
Q psy8015 89 PYDAIHVG 96 (165)
Q Consensus 89 ~fD~I~i~ 96 (165)
+| .|+.+
T Consensus 95 ~~-~vv~n 101 (244)
T 1qam_A 95 SY-KIFGN 101 (244)
T ss_dssp CC-EEEEE
T ss_pred Ce-EEEEe
Confidence 45 45554
No 258
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.08 E-value=5.3e-10 Score=91.17 Aligned_cols=88 Identities=7% Similarity=-0.027 Sum_probs=73.2
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPR 101 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~ 101 (165)
.++.+|||| ||+|..+..+++.. .+++++|+ +++++.|+. .++++++.+|..+.++ .||+|++....++
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~~~p---~~D~v~~~~~lh~ 258 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG----SNNLTYVGGDMFTSIP---NADAVLLKYILHN 258 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----BTTEEEEECCTTTCCC---CCSEEEEESCGGG
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc----CCCcEEEeccccCCCC---CccEEEeehhhcc
Confidence 467899999 99999999999775 47999999 999998863 2469999999876443 3999999998886
Q ss_pred chH--------HHHhcccc---CcEEEEEe
Q psy8015 102 YPE--------IFIHHLKS---GGRLVIPI 120 (165)
Q Consensus 102 ~p~--------~l~~~Lkp---gG~lvi~~ 120 (165)
.++ ++.+.||| ||++++..
T Consensus 259 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 259 WTDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp SCHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 653 46889999 99999864
No 259
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.08 E-value=1.1e-09 Score=91.18 Aligned_cols=111 Identities=6% Similarity=-0.126 Sum_probs=83.1
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCC----------------------------------------cE
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIP----------------------------------------NS 50 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~----------------------------------------~V 50 (165)
...+.|+.+. ...++..++|. ||||.+...+|.... +|
T Consensus 181 ~LAaall~l~-~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 181 NMAAAIILLS-NWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHT-TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHh-CCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 3445566555 45788999999 999999988886542 49
Q ss_pred EEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCCCCCCCCCccEEEEcCCCC-Cch---------HHHHhcccc--CcE
Q psy8015 51 FNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRASFGDNGPYDAIHVGAAYP-RYP---------EIFIHHLKS--GGR 115 (165)
Q Consensus 51 ~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~~~~~~~~fD~I~i~~~~~-~~p---------~~l~~~Lkp--gG~ 115 (165)
+++|+|++|++.|+ ++..|+.+ ++++++|+.+... ..+||+|+++..+. .+. ..+.+.||+ ||+
T Consensus 260 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~-~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~ 338 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT-NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWS 338 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC-CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc-cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcE
Confidence 99999999999996 66778765 9999999976433 35899999987653 221 123445555 999
Q ss_pred EEEEecCCC
Q psy8015 116 LVIPIGDTK 124 (165)
Q Consensus 116 lvi~~~~~~ 124 (165)
+++...+..
T Consensus 339 ~~iit~~~~ 347 (384)
T 3ldg_A 339 QFILTNDTD 347 (384)
T ss_dssp EEEEESCTT
T ss_pred EEEEECCHH
Confidence 999987654
No 260
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.07 E-value=5.2e-10 Score=93.04 Aligned_cols=110 Identities=5% Similarity=-0.124 Sum_probs=82.5
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC----------------------------------------CcEE
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI----------------------------------------PNSF 51 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~----------------------------------------~~V~ 51 (165)
..+.|+.+. ...++.+|||. ||||.++..+|... .+|+
T Consensus 183 lAa~ll~~~-~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 261 (385)
T 3ldu_A 183 LAAGLIYLT-PWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIY 261 (385)
T ss_dssp HHHHHHHTS-CCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEE
T ss_pred HHHHHHHhh-CCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEE
Confidence 445555554 44788999999 99999998887653 3699
Q ss_pred EEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCCCCCCccEEEEcCCCCC-ch---------HHHHhcccc--CcEE
Q psy8015 52 NINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFGDNGPYDAIHVGAAYPR-YP---------EIFIHHLKS--GGRL 116 (165)
Q Consensus 52 aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~-~p---------~~l~~~Lkp--gG~l 116 (165)
++|+|+++++.|+ ++..|+. ++++.++|+.+... ..+||+|+++..+.. +. ..+.+.||+ |+++
T Consensus 262 GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~-~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~ 340 (385)
T 3ldu_A 262 GYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS-EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSY 340 (385)
T ss_dssp EEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC-SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc-CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEE
Confidence 9999999999996 5566775 69999999876433 458999999877642 21 123445555 9999
Q ss_pred EEEecCCC
Q psy8015 117 VIPIGDTK 124 (165)
Q Consensus 117 vi~~~~~~ 124 (165)
++...+..
T Consensus 341 ~iit~~~~ 348 (385)
T 3ldu_A 341 YLITSYED 348 (385)
T ss_dssp EEEESCTT
T ss_pred EEEECCHH
Confidence 99887653
No 261
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.05 E-value=3.7e-10 Score=90.72 Aligned_cols=93 Identities=15% Similarity=0.258 Sum_probs=66.4
Q ss_pred HHHHHHHh----cCCCCCeEEEE-ccc------cHHHHHHhccC---CcEEEEeCCHHHHHhcccccCCCCCeEE-EEcc
Q psy8015 15 AKYVTYLS----GHSKRLDCLAL-TSN------TKQSTTLPTFI---PNSFNINVYYYLSGGPLSSTIDPDHDYD-LIAD 79 (165)
Q Consensus 15 ~~~l~~l~----~~~~~~~vLei-~Gs------G~~t~~la~~~---~~V~aiD~~~~~~~~A~~~~~~~~nV~~-~~gD 79 (165)
.++.+++. ...++++|||+ ||+ |. ..+++.. ++|+++|+++. ++|+++ +++|
T Consensus 48 ~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-----------v~~v~~~i~gD 114 (290)
T 2xyq_A 48 TQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-----------VSDADSTLIGD 114 (290)
T ss_dssp HHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-----------BCSSSEEEESC
T ss_pred HHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-----------CCCCEEEEECc
Confidence 34555552 34789999999 955 65 4455543 68999999997 147889 9999
Q ss_pred CCCCCCCCCCccEEEEcCCCCC-----------------chHHHHhccccCcEEEEEec
Q psy8015 80 GRASFGDNGPYDAIHVGAAYPR-----------------YPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 80 ~~~~~~~~~~fD~I~i~~~~~~-----------------~p~~l~~~LkpgG~lvi~~~ 121 (165)
+.+.. ..++||+|+++...+. +.+.+.+.|||||++++.+.
T Consensus 115 ~~~~~-~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 115 CATVH-TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp GGGCC-CSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccCC-ccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 87632 2368999999754321 22456899999999999663
No 262
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.05 E-value=2.6e-11 Score=95.82 Aligned_cols=84 Identities=12% Similarity=0.052 Sum_probs=64.1
Q ss_pred HHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCH-------HHHHhcc--cccCCCCC-eEEEEccCCCCCC
Q psy8015 17 YVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYY-------YLSGGPL--SSTIDPDH-DYDLIADGRASFG 85 (165)
Q Consensus 17 ~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~-------~~~~~A~--~~~~~~~n-V~~~~gD~~~~~~ 85 (165)
++.......++.+|||+ ||+|..|..+|+...+|+++|+++ ++++.|+ .+..++.| ++++++|+.+.++
T Consensus 74 ~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~ 153 (258)
T 2r6z_A 74 LIAKAVNHTAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMP 153 (258)
T ss_dssp HHHHHTTGGGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHH
T ss_pred HHHHHhCcCCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHH
Confidence 33333333567999999 999999999999888999999999 8888885 33345545 9999999865332
Q ss_pred C--C--CCccEEEEcCCCC
Q psy8015 86 D--N--GPYDAIHVGAAYP 100 (165)
Q Consensus 86 ~--~--~~fD~I~i~~~~~ 100 (165)
. . ++||+|+++...+
T Consensus 154 ~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 154 ALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHHHHHCCCSEEEECCCC-
T ss_pred hhhccCCCccEEEECCCCC
Confidence 1 1 5899999987654
No 263
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.02 E-value=7.8e-11 Score=86.66 Aligned_cols=81 Identities=12% Similarity=0.054 Sum_probs=64.0
Q ss_pred CCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCC---CCCCccEEEEcCCC
Q psy8015 24 HSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFG---DNGPYDAIHVGAAY 99 (165)
Q Consensus 24 ~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~---~~~~fD~I~i~~~~ 99 (165)
.++|++|||+ ||+ +++|++++|++.|+.+. . .+++++++|+.+... +.++||+|++....
T Consensus 10 ~~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~-~-~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS--------------SPVEALKGLVDKLQALT-G-NEGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CCTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHT-T-TTSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhc-c-cCcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 4789999999 886 23999999999997332 1 259999999876433 45789999998888
Q ss_pred CCc-h------HHHHhccccCcEEEEEe
Q psy8015 100 PRY-P------EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 100 ~~~-p------~~l~~~LkpgG~lvi~~ 120 (165)
+++ + .++.+.|||||++++..
T Consensus 74 ~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 74 GSTTLHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp TCCCCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcccCHHHHHHHHHHHCCCCEEEEEEc
Confidence 776 3 36789999999999953
No 264
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.01 E-value=4.3e-10 Score=90.79 Aligned_cols=90 Identities=11% Similarity=-0.007 Sum_probs=72.3
Q ss_pred CchHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCC
Q psy8015 9 SVSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRAS 83 (165)
Q Consensus 9 ~~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~ 83 (165)
-+|-....++++|. ..++.+|||+ ||+|..|..+++.. ++|+++|+|++|++.|+ ++..+ +|++++++|..+.
T Consensus 10 h~pvLl~e~l~~L~-~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l 87 (301)
T 1m6y_A 10 HIPVMVREVIEFLK-PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREA 87 (301)
T ss_dssp CCCTTHHHHHHHHC-CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGH
T ss_pred ccHHHHHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHH
Confidence 35667788889885 4789999999 99999999999874 79999999999999996 55556 6899999997542
Q ss_pred C---CC--CCCccEEEEcCCCC
Q psy8015 84 F---GD--NGPYDAIHVGAAYP 100 (165)
Q Consensus 84 ~---~~--~~~fD~I~i~~~~~ 100 (165)
. .. ..+||.|+++..+.
T Consensus 88 ~~~l~~~g~~~~D~Vl~D~gvS 109 (301)
T 1m6y_A 88 DFLLKTLGIEKVDGILMDLGVS 109 (301)
T ss_dssp HHHHHHTTCSCEEEEEEECSCC
T ss_pred HHHHHhcCCCCCCEEEEcCccc
Confidence 1 11 15799999987654
No 265
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.01 E-value=2.9e-09 Score=87.20 Aligned_cols=93 Identities=11% Similarity=-0.056 Sum_probs=74.1
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCC--cEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIP--NSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAY 99 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~--~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~ 99 (165)
.+..+|+|| ||+|.++..+++... +++..|. |++++.|+ .+..+.++|+++.+|..+... ..+|++++...+
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~--~~~D~~~~~~vl 254 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL--PEADLYILARVL 254 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCC--CCCSEEEEESSG
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCC--CCceEEEeeeec
Confidence 567899999 999999999998875 5666776 88999986 444456789999999876432 358999999988
Q ss_pred CCchH--------HHHhccccCcEEEEEe
Q psy8015 100 PRYPE--------IFIHHLKSGGRLVIPI 120 (165)
Q Consensus 100 ~~~p~--------~l~~~LkpgG~lvi~~ 120 (165)
++.++ .+.+.|+|||++++..
T Consensus 255 h~~~d~~~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 255 HDWADGKCSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp GGSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ccCCHHHHHHHHHHHHhhCCCCCEEEEEE
Confidence 87664 4678999999999865
No 266
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.99 E-value=5.8e-10 Score=87.81 Aligned_cols=69 Identities=7% Similarity=-0.118 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCc--EEEEeCCHHHHHhcccccCCCCCeEEEEccCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPN--SFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA 82 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~--V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~ 82 (165)
+...+++++.+. ..++++|||| ||+|++|. +++ +++ |+++|+|++|++.++.+..+.+|++++++|+.+
T Consensus 7 ~~i~~~iv~~~~-~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~ 78 (252)
T 1qyr_A 7 QFVIDSIVSAIN-PQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMT 78 (252)
T ss_dssp HHHHHHHHHHHC-CCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGG
T ss_pred HHHHHHHHHhcC-CCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhh
Confidence 567788898885 4789999999 99999999 765 577 999999999999997322223589999999876
No 267
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.98 E-value=7.5e-10 Score=95.81 Aligned_cols=107 Identities=9% Similarity=0.060 Sum_probs=79.4
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC--------------------CcEEEEeCCHHHHHhcc--cccCCC
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--------------------PNSFNINVYYYLSGGPL--SSTIDP 70 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--------------------~~V~aiD~~~~~~~~A~--~~~~~~ 70 (165)
+..|++++. ..++.+|||. ||||.+...+++.. .+++++|+++.+++.|+ +...|.
T Consensus 158 v~~mv~~l~-p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi 236 (541)
T 2ar0_A 158 IKTIIHLLK-PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDI 236 (541)
T ss_dssp HHHHHHHHC-CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHhc-cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCC
Confidence 344556654 4678999999 99999987776542 37999999999999996 444566
Q ss_pred CC-----eEEEEccCCCCC-CCCCCccEEEEcCCCCC--------------------chHHHHhccccCcEEEEEec
Q psy8015 71 DH-----DYDLIADGRASF-GDNGPYDAIHVGAAYPR--------------------YPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 71 ~n-----V~~~~gD~~~~~-~~~~~fD~I~i~~~~~~--------------------~p~~l~~~LkpgG~lvi~~~ 121 (165)
.+ +.++++|..... ....+||+|+.+..+.. ....+.+.|+|||+++++++
T Consensus 237 ~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 237 EGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp CCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 65 889999986532 22468999999865431 12356789999999998875
No 268
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.95 E-value=7.9e-10 Score=88.31 Aligned_cols=69 Identities=7% Similarity=-0.020 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCc----EEEEeCCHHHHHhcccccCCCCCeEEEEccCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPN----SFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA 82 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~----V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~ 82 (165)
+....++++.+. ..++++|||| ||+|.+|..|++.+.+ |+++|+|++|++.++.+. ..|++++++|+.+
T Consensus 28 ~~i~~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~~~v~~i~~D~~~ 101 (279)
T 3uzu_A 28 HGVIDAIVAAIR-PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--GELLELHAGDALT 101 (279)
T ss_dssp HHHHHHHHHHHC-CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--GGGEEEEESCGGG
T ss_pred HHHHHHHHHhcC-CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--CCCcEEEECChhc
Confidence 456778888885 4789999999 9999999999998777 999999999999997432 4689999999876
No 269
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.94 E-value=3.8e-09 Score=86.25 Aligned_cols=88 Identities=9% Similarity=0.028 Sum_probs=72.3
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPR 101 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~ 101 (165)
.+..+|||| ||+|.++..+++... +++++|+ +.+++.|+. .++++++.+|..+..+ .||+|++....++
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~~~~---~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----NENLNFVGGDMFKSIP---SADAVLLKWVLHD 263 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----CSSEEEEECCTTTCCC---CCSEEEEESCGGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----CCCcEEEeCccCCCCC---CceEEEEcccccC
Confidence 467899999 999999999998763 7999999 899987762 3579999999876333 4999999988886
Q ss_pred chH--------HHHhcccc---CcEEEEEe
Q psy8015 102 YPE--------IFIHHLKS---GGRLVIPI 120 (165)
Q Consensus 102 ~p~--------~l~~~Lkp---gG~lvi~~ 120 (165)
.++ ++.+.|+| ||++++..
T Consensus 264 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 264 WNDEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp SCHHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 653 46789999 99999854
No 270
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.91 E-value=1.9e-09 Score=86.33 Aligned_cols=103 Identities=7% Similarity=-0.020 Sum_probs=75.5
Q ss_pred HHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc-------CCcEEEEeCCHH--------------------------HHH
Q psy8015 16 KYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF-------IPNSFNINVYYY--------------------------LSG 61 (165)
Q Consensus 16 ~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~-------~~~V~aiD~~~~--------------------------~~~ 61 (165)
.+++.+......++|||+ |..|+.+.++|.. .++|+++|..+. .++
T Consensus 96 ~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~ 175 (282)
T 2wk1_A 96 QCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEE 175 (282)
T ss_dssp HHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHH
T ss_pred HHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHH
Confidence 444444332456799999 9999999998865 368999996532 244
Q ss_pred hcc--cccCCC--CCeEEEEccCCCCCCC--CCCccEEEEcCCCC-C---chHHHHhccccCcEEEE
Q psy8015 62 GPL--SSTIDP--DHDYDLIADGRASFGD--NGPYDAIHVGAAYP-R---YPEIFIHHLKSGGRLVI 118 (165)
Q Consensus 62 ~A~--~~~~~~--~nV~~~~gD~~~~~~~--~~~fD~I~i~~~~~-~---~p~~l~~~LkpgG~lvi 118 (165)
.++ +++.|+ ++|+++.||+.+.++. .++||.|++++... . .-+.+.+.|+|||.+++
T Consensus 176 ~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 176 EVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp HHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEE
Confidence 454 667776 6899999998765543 36899999999752 1 23567899999998887
No 271
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.91 E-value=4.2e-10 Score=88.91 Aligned_cols=96 Identities=10% Similarity=-0.035 Sum_probs=67.6
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--------------CcEEEEeCCH---HHHH-----------hcc--ccc------
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--------------PNSFNINVYY---YLSG-----------GPL--SST------ 67 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--------------~~V~aiD~~~---~~~~-----------~A~--~~~------ 67 (165)
.+..+|||| +|+||.++.+++.. .+++++|.+| +.++ .|+ ++.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 456899999 99999998876532 3799999987 3333 343 221
Q ss_pred ------C--CCCCeEEEEccCCCCCCCC-----CCccEEEEcCCCC-Cch--------HHHHhccccCcEEEEEe
Q psy8015 68 ------I--DPDHDYDLIADGRASFGDN-----GPYDAIHVGAAYP-RYP--------EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 68 ------~--~~~nV~~~~gD~~~~~~~~-----~~fD~I~i~~~~~-~~p--------~~l~~~LkpgG~lvi~~ 120 (165)
+ +..|++++.||+.+.++.. ++||+||+++..+ .-| +.+.++|+|||+|+...
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tys 213 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT 213 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESC
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEe
Confidence 1 2357899999987654432 3799999997543 233 36889999999998633
No 272
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.90 E-value=3e-09 Score=84.38 Aligned_cols=92 Identities=12% Similarity=-0.019 Sum_probs=76.0
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAY 99 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~ 99 (165)
.+..+|||| ||+|-++..++... .+|+++|+|+.|++.++ +..+|.. .++.+.|.....+ .++||++++.-..
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~~p-~~~~DvaL~lkti 208 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLEDRL-DEPADVTLLLKTL 208 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTSCC-CSCCSEEEETTCH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeecccCC-CCCcchHHHHHHH
Confidence 457899999 99999998888774 58999999999999996 5666764 8999999876655 4789999998888
Q ss_pred CCchH-------HHHhccccCcEEEE
Q psy8015 100 PRYPE-------IFIHHLKSGGRLVI 118 (165)
Q Consensus 100 ~~~p~-------~l~~~LkpgG~lvi 118 (165)
+.+.+ .+++.|+|+|.+|-
T Consensus 209 ~~Le~q~kg~g~~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 209 PCLETQQRGSGWEVIDIVNSPNIVVT 234 (281)
T ss_dssp HHHHHHSTTHHHHHHHHSSCSEEEEE
T ss_pred HHhhhhhhHHHHHHHHHhCCCCEEEe
Confidence 77654 47899999887655
No 273
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.90 E-value=7.8e-09 Score=91.95 Aligned_cols=111 Identities=10% Similarity=0.009 Sum_probs=83.1
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC-------------------------------------------
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI------------------------------------------- 47 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~------------------------------------------- 47 (165)
...+.|+.+. ...++.++||. ||||.+...+|..+
T Consensus 177 ~LAa~ll~~~-~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~ 255 (703)
T 3v97_A 177 TLAAAIVMRS-GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEY 255 (703)
T ss_dssp HHHHHHHHHT-TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhh-CCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccC
Confidence 4455666655 44688999999 99999988777642
Q ss_pred -CcEEEEeCCHHHHHhcc--cccCCCCC-eEEEEccCCCCCCC--CCCccEEEEcCCCCC-c------hH------HHHh
Q psy8015 48 -PNSFNINVYYYLSGGPL--SSTIDPDH-DYDLIADGRASFGD--NGPYDAIHVGAAYPR-Y------PE------IFIH 108 (165)
Q Consensus 48 -~~V~aiD~~~~~~~~A~--~~~~~~~n-V~~~~gD~~~~~~~--~~~fD~I~i~~~~~~-~------p~------~l~~ 108 (165)
.+|+++|+|+++++.|+ ++.+|+.+ +++.++|+.+..++ .++||+|+++..+.. + .+ ..++
T Consensus 256 ~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk 335 (703)
T 3v97_A 256 SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK 335 (703)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHH
T ss_pred CccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHH
Confidence 37999999999999996 67788876 99999999764332 238999999866532 1 11 2345
Q ss_pred ccccCcEEEEEecCC
Q psy8015 109 HLKSGGRLVIPIGDT 123 (165)
Q Consensus 109 ~LkpgG~lvi~~~~~ 123 (165)
.+.|||++++..++.
T Consensus 336 ~~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 336 NQFGGWNLSLFSASP 350 (703)
T ss_dssp HHCTTCEEEEEESCH
T ss_pred hhCCCCeEEEEeCCH
Confidence 667899999988754
No 274
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.89 E-value=1e-08 Score=80.44 Aligned_cols=93 Identities=10% Similarity=-0.067 Sum_probs=74.1
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPR 101 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~ 101 (165)
.+..+|||| ||+|-++..+. -..+|+++|+|+.+++.++ +...| .+..+.+.|.....++ ++||++++.-..|.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g-~~~~~~v~D~~~~~~~-~~~DvvLllk~lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKD-WDFTFALQDVLCAPPA-EAGDLALIFKLLPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTT-CEEEEEECCTTTSCCC-CBCSEEEEESCHHH
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcC-CCceEEEeecccCCCC-CCcchHHHHHHHHH
Confidence 467899999 99999998777 4568999999999999997 44445 5789999998776554 58999999877766
Q ss_pred chH-------HHHhccccCcEEEEEec
Q psy8015 102 YPE-------IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 102 ~p~-------~l~~~LkpgG~lvi~~~ 121 (165)
+.+ .+++.|+++|.+| ..+
T Consensus 181 LE~q~~~~~~~ll~aL~~~~vvV-sfP 206 (253)
T 3frh_A 181 LEREQAGSAMALLQSLNTPRMAV-SFP 206 (253)
T ss_dssp HHHHSTTHHHHHHHHCBCSEEEE-EEE
T ss_pred hhhhchhhHHHHHHHhcCCCEEE-EcC
Confidence 543 5788999986544 454
No 275
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.85 E-value=1.2e-09 Score=86.41 Aligned_cols=84 Identities=8% Similarity=0.002 Sum_probs=62.9
Q ss_pred HHHHHhcCCCC--CeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cc------cC-C-C-CCeEEEEccCCC
Q psy8015 17 YVTYLSGHSKR--LDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SS------TI-D-P-DHDYDLIADGRA 82 (165)
Q Consensus 17 ~l~~l~~~~~~--~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~------~~-~-~-~nV~~~~gD~~~ 82 (165)
+.+.+ ...++ .+|||+ ||+|..+..+|+...+|+++|+++.+++.++ ++ .. + + +|++++++|+.+
T Consensus 78 l~~al-~l~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~ 156 (258)
T 2oyr_A 78 VAKAV-GIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLT 156 (258)
T ss_dssp HHHHT-TCBTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHH
T ss_pred HHHHh-cccCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHH
Confidence 34444 33567 899999 9999999999998889999999998866653 21 11 2 3 479999999865
Q ss_pred CCCC-CCCccEEEEcCCCCC
Q psy8015 83 SFGD-NGPYDAIHVGAAYPR 101 (165)
Q Consensus 83 ~~~~-~~~fD~I~i~~~~~~ 101 (165)
.++. .++||+|+++..++.
T Consensus 157 ~L~~~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 157 ALTDITPRPQVVYLDPMFPH 176 (258)
T ss_dssp HSTTCSSCCSEEEECCCCCC
T ss_pred HHHhCcccCCEEEEcCCCCC
Confidence 3332 247999999987764
No 276
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.84 E-value=2.8e-08 Score=79.93 Aligned_cols=98 Identities=16% Similarity=0.129 Sum_probs=78.1
Q ss_pred CCCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc--cc-----cCCCCCeEEEEccCCCCCC-CCCCccE
Q psy8015 24 HSKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL--SS-----TIDPDHDYDLIADGRASFG-DNGPYDA 92 (165)
Q Consensus 24 ~~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~--~~-----~~~~~nV~~~~gD~~~~~~-~~~~fD~ 92 (165)
+...++||-| -|.|..+..+.+. ..+|+.+|+|+++++.+| +. .++-++++++.+|+.+-+. ..++||+
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 3567899999 9999999888875 478999999999999996 32 2334679999999987443 3478999
Q ss_pred EEEcCCCCCch----------HHHHhccccCcEEEEEec
Q psy8015 93 IHVGAAYPRYP----------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 93 I~i~~~~~~~p----------~~l~~~LkpgG~lvi~~~ 121 (165)
|+++...+.-| +.+.+.|+|||+++.-.+
T Consensus 161 Ii~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 99997654322 468899999999999765
No 277
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.83 E-value=2.5e-09 Score=88.32 Aligned_cols=104 Identities=15% Similarity=0.008 Sum_probs=76.9
Q ss_pred HHHHhcCCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc--cccCCC------CCeEEEEccCCCCC-C
Q psy8015 18 VTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL--SSTIDP------DHDYDLIADGRASF-G 85 (165)
Q Consensus 18 l~~l~~~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~--~~~~~~------~nV~~~~gD~~~~~-~ 85 (165)
...+...+||++|||+ +|.|.=|..++.+. ++|+|.|+++..++..+ +++++. .|+++...|+.... .
T Consensus 140 ~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~ 219 (359)
T 4fzv_A 140 PVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL 219 (359)
T ss_dssp HHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH
T ss_pred HHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh
Confidence 3334455899999999 99999999998876 47999999999988764 444332 47999999986521 1
Q ss_pred CCCCccEEEEcCCCCC--------ch----------------------HHHHhccccCcEEEEEec
Q psy8015 86 DNGPYDAIHVGAAYPR--------YP----------------------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 86 ~~~~fD~I~i~~~~~~--------~p----------------------~~l~~~LkpgG~lvi~~~ 121 (165)
..+.||.|++++.+.. -| +...+.|||||+||...-
T Consensus 220 ~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTC 285 (359)
T 4fzv_A 220 EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTC 285 (359)
T ss_dssp STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Confidence 2468999999876532 01 124678999999998754
No 278
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.81 E-value=1.3e-08 Score=88.20 Aligned_cols=98 Identities=10% Similarity=0.059 Sum_probs=74.1
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC-----CcEEEEeCCHHHHHhcc--cccCCC--CCeEEEEccCCCC-CC--CCCCcc
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI-----PNSFNINVYYYLSGGPL--SSTIDP--DHDYDLIADGRAS-FG--DNGPYD 91 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~-----~~V~aiD~~~~~~~~A~--~~~~~~--~nV~~~~gD~~~~-~~--~~~~fD 91 (165)
.++.+|+|. ||||.+...+++.. .+++++|+++.+++.|+ +...|. +++.+.++|.... |+ ...+||
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccccccccc
Confidence 478899999 99999887777653 47999999999999996 334565 5789999998764 23 246899
Q ss_pred EEEEcCCCCC-------------------ch----------HHHHhccc-cCcEEEEEecC
Q psy8015 92 AIHVGAAYPR-------------------YP----------EIFIHHLK-SGGRLVIPIGD 122 (165)
Q Consensus 92 ~I~i~~~~~~-------------------~p----------~~l~~~Lk-pgG~lvi~~~~ 122 (165)
+|+.+..+.. +| ..+.+.|+ |||++.++++.
T Consensus 300 ~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 300 GVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp EEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred EEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 9998744310 11 24578999 99999887653
No 279
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.66 E-value=2.9e-08 Score=85.99 Aligned_cols=106 Identities=12% Similarity=-0.018 Sum_probs=73.2
Q ss_pred HHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc-----------------CCcEEEEeCCHHHHHhcc--cccCCCC-C
Q psy8015 14 VAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF-----------------IPNSFNINVYYYLSGGPL--SSTIDPD-H 72 (165)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~-----------------~~~V~aiD~~~~~~~~A~--~~~~~~~-n 72 (165)
+..|++++ ...++ +|||. ||||.+...+++. ..+++++|+++.+++.|+ +...|++ +
T Consensus 234 v~lmv~ll-~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~ 311 (544)
T 3khk_A 234 VTLIVEML-EPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFN 311 (544)
T ss_dssp HHHHHHHH-CCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCB
T ss_pred HHHHHHHH-hcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcc
Confidence 33444444 33444 99999 9999887766442 236999999999999996 3334553 3
Q ss_pred eEEEEccCCCCC-CCCCCccEEEEcCCCCC-------------------------ch----------HHHHhccccCcEE
Q psy8015 73 DYDLIADGRASF-GDNGPYDAIHVGAAYPR-------------------------YP----------EIFIHHLKSGGRL 116 (165)
Q Consensus 73 V~~~~gD~~~~~-~~~~~fD~I~i~~~~~~-------------------------~p----------~~l~~~LkpgG~l 116 (165)
+.+.++|..... ....+||+|+.+..+.. .| ..+.+.|+|||++
T Consensus 312 i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~ 391 (544)
T 3khk_A 312 FGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSM 391 (544)
T ss_dssp CCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEE
T ss_pred cceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceE
Confidence 555888876532 23468999999855431 22 2457899999999
Q ss_pred EEEec
Q psy8015 117 VIPIG 121 (165)
Q Consensus 117 vi~~~ 121 (165)
+++++
T Consensus 392 aiVlP 396 (544)
T 3khk_A 392 ALLLA 396 (544)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 88875
No 280
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.63 E-value=1.4e-07 Score=84.63 Aligned_cols=97 Identities=6% Similarity=-0.103 Sum_probs=69.2
Q ss_pred CCCeEEEE-ccccHHHHHHhccCC-----cEEEEeCCHHHHHhc--c--ccc----CCCCCeEEEEccCCCC-CCCCCCc
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTFIP-----NSFNINVYYYLSGGP--L--SST----IDPDHDYDLIADGRAS-FGDNGPY 90 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~~~-----~V~aiD~~~~~~~~A--~--~~~----~~~~nV~~~~gD~~~~-~~~~~~f 90 (165)
++.+|||. ||||.+...+++..+ +++++|+++.+++.| | +.. .+..+..+...|.... ......|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 58899999 999999998887653 799999999999999 4 222 2444445565555431 1124689
Q ss_pred cEEEEcCCCCC---c--------------------------------hHHHHhccccCcEEEEEecC
Q psy8015 91 DAIHVGAAYPR---Y--------------------------------PEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 91 D~I~i~~~~~~---~--------------------------------p~~l~~~LkpgG~lvi~~~~ 122 (165)
|+|+.+..+.. . .+...+.|+|||++++.++.
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 99999876521 1 01356789999999998763
No 281
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.57 E-value=2.3e-07 Score=73.74 Aligned_cols=112 Identities=8% Similarity=-0.031 Sum_probs=77.8
Q ss_pred chHHHHHHHHHHhcC--CCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcc-cccCCCCCeEEEEccCCCC
Q psy8015 10 VSGAVAKYVTYLSGH--SKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPL-SSTIDPDHDYDLIADGRAS 83 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~--~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~-~~~~~~~nV~~~~gD~~~~ 83 (165)
+|+...+|+++.... +++.+|||+ ||.|.++..++.. +.+|+++|+..++...++ ....+. |+....++....
T Consensus 56 rSRaA~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~-~ii~~~~~~dv~ 134 (277)
T 3evf_A 56 VSRGTAKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGW-NIITFKDKTDIH 134 (277)
T ss_dssp SSTHHHHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTG-GGEEEECSCCTT
T ss_pred cccHHHHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCC-CeEEEeccceeh
Confidence 677888888887653 678999999 9999999988865 458999999877632232 122232 555566664322
Q ss_pred CCCCCCccEEEEcCCCC----Cch--------HHHHhccccC-cEEEEEecC
Q psy8015 84 FGDNGPYDAIHVGAAYP----RYP--------EIFIHHLKSG-GRLVIPIGD 122 (165)
Q Consensus 84 ~~~~~~fD~I~i~~~~~----~~p--------~~l~~~Lkpg-G~lvi~~~~ 122 (165)
....++||+|+++.+.+ .+. +...+.|+|| |.+++-+=.
T Consensus 135 ~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 135 RLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp TSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred hcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 22346899999998765 111 2235899999 999996654
No 282
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.37 E-value=5.4e-07 Score=71.93 Aligned_cols=88 Identities=6% Similarity=-0.150 Sum_probs=70.2
Q ss_pred chHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC---CC
Q psy8015 10 VSGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS---FG 85 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~---~~ 85 (165)
+|=+...+++.|. .+++..++|. ||.|..|..+++..++|+++|.|+++++.|+. ... ++++++++|..+. +.
T Consensus 7 ~pVLl~e~le~L~-~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~~-~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 7 VPVLYQEALDLLA-VRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LHL-PGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp CCTTHHHHHHHHT-CCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCC-TTEEEEESCGGGHHHHHH
T ss_pred hhHHHHHHHHhhC-CCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hcc-CCEEEEECCcchHHHHHH
Confidence 4456778899985 4789999999 99999999999877899999999999999873 222 6899999997542 11
Q ss_pred --CCCCccEEEEcCCCC
Q psy8015 86 --DNGPYDAIHVGAAYP 100 (165)
Q Consensus 86 --~~~~fD~I~i~~~~~ 100 (165)
...+||.|+++-++.
T Consensus 84 ~~g~~~vDgIL~DLGvS 100 (285)
T 1wg8_A 84 ALGVERVDGILADLGVS 100 (285)
T ss_dssp HTTCSCEEEEEEECSCC
T ss_pred HcCCCCcCEEEeCCccc
Confidence 125799999986665
No 283
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.31 E-value=1.8e-06 Score=68.77 Aligned_cols=111 Identities=12% Similarity=-0.007 Sum_probs=76.9
Q ss_pred chHHHHHHHHHHhcC--CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc-cccCCCCCeEEEEccCC-C
Q psy8015 10 VSGAVAKYVTYLSGH--SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL-SSTIDPDHDYDLIADGR-A 82 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~--~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~-~~~~~~~nV~~~~gD~~-~ 82 (165)
+|+..-+|+++.... .++.+|||+ ||.|.++..++... ..|+++|+..++...+. .+..+. |+.....+.. .
T Consensus 72 rSRAAfKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~-~ii~~~~~~dv~ 150 (282)
T 3gcz_A 72 VSRGSAKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGW-NLIRFKDKTDVF 150 (282)
T ss_dssp SSTHHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTG-GGEEEECSCCGG
T ss_pred ecHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCC-ceEEeeCCcchh
Confidence 677888888887654 688999999 99999999888654 57999999887655554 233332 4333333321 1
Q ss_pred CCCCCCCccEEEEcCCCC----Cch--------HHHHhccccC--cEEEEEecC
Q psy8015 83 SFGDNGPYDAIHVGAAYP----RYP--------EIFIHHLKSG--GRLVIPIGD 122 (165)
Q Consensus 83 ~~~~~~~fD~I~i~~~~~----~~p--------~~l~~~Lkpg--G~lvi~~~~ 122 (165)
.+ ...++|+|+++.+.. .+. +-..+.|+|| |.+|+=+=.
T Consensus 151 ~l-~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 151 NM-EVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp GS-CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred hc-CCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 22 246899999998876 111 1235789999 999996544
No 284
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.30 E-value=2.6e-06 Score=70.45 Aligned_cols=86 Identities=9% Similarity=-0.083 Sum_probs=65.6
Q ss_pred chHHHHHHHHHHh----------cCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEc
Q psy8015 10 VSGAVAKYVTYLS----------GHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIA 78 (165)
Q Consensus 10 ~~~~~~~~l~~l~----------~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~g 78 (165)
.|+..-|+-|.+. .+.+|++|||+ +++|.+|..+++..++|+|||..+ |... +. ..++|+++.+
T Consensus 185 pSRa~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~-l~~~--l~--~~~~V~~~~~ 259 (375)
T 4auk_A 185 PSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP-MAQS--LM--DTGQVTWLRE 259 (375)
T ss_dssp SCTTHHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSC-CCHH--HH--TTTCEEEECS
T ss_pred CCHHHHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh-cChh--hc--cCCCeEEEeC
Confidence 4556666666431 13689999999 999999999999999999999753 2221 11 3468999999
Q ss_pred cCCCCCCCCCCccEEEEcCCCC
Q psy8015 79 DGRASFGDNGPYDAIHVGAAYP 100 (165)
Q Consensus 79 D~~~~~~~~~~fD~I~i~~~~~ 100 (165)
|+....++.++||.|+++.+.+
T Consensus 260 d~~~~~~~~~~~D~vvsDm~~~ 281 (375)
T 4auk_A 260 DGFKFRPTRSNISWMVCDMVEK 281 (375)
T ss_dssp CTTTCCCCSSCEEEEEECCSSC
T ss_pred ccccccCCCCCcCEEEEcCCCC
Confidence 9987666667899999988764
No 285
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.24 E-value=3e-06 Score=73.11 Aligned_cols=106 Identities=12% Similarity=0.020 Sum_probs=72.2
Q ss_pred HHHHHHHhcCCCCCeEEEE-ccccHHHHHHhcc---------------CCcEEEEeCCHHHHHhcc--cccCCCCCeEEE
Q psy8015 15 AKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTF---------------IPNSFNINVYYYLSGGPL--SSTIDPDHDYDL 76 (165)
Q Consensus 15 ~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~---------------~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~ 76 (165)
..|.+++ ...++.+|+|- ||||.+-....+. -..++++|+++.++..|+ +--+|.++-.+.
T Consensus 207 ~lmv~l~-~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~ 285 (530)
T 3ufb_A 207 RFMVEVM-DPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRID 285 (530)
T ss_dssp HHHHHHH-CCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEE
T ss_pred HHHHHhh-ccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcccccc
Confidence 3444555 44789999999 9999887655432 135999999999999996 333466556777
Q ss_pred EccCCCCC----CCCCCccEEEEcCCCCC---------ch-------------HHHHhccc-------cCcEEEEEec
Q psy8015 77 IADGRASF----GDNGPYDAIHVGAAYPR---------YP-------------EIFIHHLK-------SGGRLVIPIG 121 (165)
Q Consensus 77 ~gD~~~~~----~~~~~fD~I~i~~~~~~---------~p-------------~~l~~~Lk-------pgG~lvi~~~ 121 (165)
.+|..... .+..+||+|+.+..+.. .+ ..+.+.|| |||++.++++
T Consensus 286 ~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 286 PENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp CSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred ccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 88875421 12357999999876531 11 12445665 7999998864
No 286
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.22 E-value=3.3e-06 Score=70.01 Aligned_cols=97 Identities=14% Similarity=0.110 Sum_probs=71.1
Q ss_pred CCCCeEEEE-ccccHHHHHHhcc-CCcEEEEeCCHHHHHhcc--ccc-----CC---CCCeEEEEccCCCCCC----CCC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTF-IPNSFNINVYYYLSGGPL--SST-----ID---PDHDYDLIADGRASFG----DNG 88 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~--~~~-----~~---~~nV~~~~gD~~~~~~----~~~ 88 (165)
.+.++||-| -|.|..+..+.+. ..+|+.+|+|+++++.|+ +.. ++ .++++++.+|+.+-+. ...
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 356899999 9999999887764 468999999999999996 322 11 1358999999864321 245
Q ss_pred CccEEEEcCCCC---Cch-------------HHHHhccccCcEEEEEec
Q psy8015 89 PYDAIHVGAAYP---RYP-------------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 89 ~fD~I~i~~~~~---~~p-------------~~l~~~LkpgG~lvi~~~ 121 (165)
+||+|+++...+ ..| +.+.+.|+|||+++.-.+
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 799999985331 111 246789999999998654
No 287
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.21 E-value=8.4e-07 Score=70.80 Aligned_cols=106 Identities=10% Similarity=-0.008 Sum_probs=78.4
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC---
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF--- 84 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~--- 84 (165)
+...+.++..+.. -.+..+||+ +|||.++..+.+...+++.+|.+++..+..+ ++. .++++++..|+...+
T Consensus 77 p~~l~~yf~~l~~-~n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l 153 (283)
T 2oo3_A 77 PSLFLEYISVIKQ-INLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNAL 153 (283)
T ss_dssp CGGGHHHHHHHHH-HSSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHH
T ss_pred cHHHHHHHHHHHH-hcCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHh
Confidence 3444566666655 356789999 9999999999987789999999999999875 332 357999999986532
Q ss_pred -CCCCCccEEEEcCCCCC--chHH----H--HhccccCcEEEEE
Q psy8015 85 -GDNGPYDAIHVGAAYPR--YPEI----F--IHHLKSGGRLVIP 119 (165)
Q Consensus 85 -~~~~~fD~I~i~~~~~~--~p~~----l--~~~LkpgG~lvi~ 119 (165)
++..+||+||++..+.. .-+. + ...+.|+|.+++=
T Consensus 154 ~~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~W 197 (283)
T 2oo3_A 154 LPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVW 197 (283)
T ss_dssp CSCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred cCCCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEE
Confidence 33457999999998873 2222 2 2356789998883
No 288
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.21 E-value=1.3e-05 Score=62.48 Aligned_cols=107 Identities=15% Similarity=-0.018 Sum_probs=79.7
Q ss_pred chHHHHHHHHHHhcC--CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc-cccCCCCCeEEEEc-cCCC
Q psy8015 10 VSGAVAKYVTYLSGH--SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL-SSTIDPDHDYDLIA-DGRA 82 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~--~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~-~~~~~~~nV~~~~g-D~~~ 82 (165)
+|+...+|.++.... +++++|+|+ |++|.++...+... .+|+|+|+-..=.+.-+ .+..|...|+|+.+ |...
T Consensus 60 rSRa~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~ 139 (267)
T 3p8z_A 60 VSRGSAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFY 139 (267)
T ss_dssp SSTHHHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGG
T ss_pred cchHHHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceee
Confidence 677888888776543 689999999 99999999887765 58999999876665554 56778888999999 8754
Q ss_pred CCCCCCCccEEEEcCCCCC-ch--H---------HHHhccccCcEEEEE
Q psy8015 83 SFGDNGPYDAIHVGAAYPR-YP--E---------IFIHHLKSGGRLVIP 119 (165)
Q Consensus 83 ~~~~~~~fD~I~i~~~~~~-~p--~---------~l~~~LkpgG~lvi~ 119 (165)
..+ .++|.|+|+-+... .| | -+.++|++ |-+++=
T Consensus 140 ~~~--~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~K 185 (267)
T 3p8z_A 140 LPP--EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIK 185 (267)
T ss_dssp CCC--CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEE
T ss_pred cCC--ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEE
Confidence 333 67999999976642 12 1 13578888 666553
No 289
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.20 E-value=1.7e-06 Score=62.75 Aligned_cols=85 Identities=11% Similarity=0.000 Sum_probs=60.9
Q ss_pred CCCCeEEEE-cccc-HHHHHHhc-cCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCC-CCccEEEEcCCCC
Q psy8015 25 SKRLDCLAL-TSNT-KQSTTLPT-FIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDN-GPYDAIHVGAAYP 100 (165)
Q Consensus 25 ~~~~~vLei-~GsG-~~t~~la~-~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~-~~fD~I~i~~~~~ 100 (165)
.++.+|||| ||+| ..|..|+. ..-.|+++|+++..++ +++.|.+++..+. ..||+|+.-...+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~-------------~v~dDiF~P~~~~Y~~~DLIYsirPP~ 100 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG-------------IVRDDITSPRMEIYRGAALIYSIRPPA 100 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT-------------EECCCSSSCCHHHHTTEEEEEEESCCT
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc-------------eEEccCCCCcccccCCcCEEEEcCCCH
Confidence 457899999 9999 59999997 5557999999997765 7888887644321 4899998877777
Q ss_pred CchHHHHhccc-cCcEEEE-EecC
Q psy8015 101 RYPEIFIHHLK-SGGRLVI-PIGD 122 (165)
Q Consensus 101 ~~p~~l~~~Lk-pgG~lvi-~~~~ 122 (165)
++-..+.+.-+ -|.-+++ +.+.
T Consensus 101 El~~~i~~lA~~v~adliI~pL~~ 124 (153)
T 2k4m_A 101 EIHSSLMRVADAVGARLIIKPLTG 124 (153)
T ss_dssp TTHHHHHHHHHHHTCEEEEECBTT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCC
Confidence 77655443332 3444444 4443
No 290
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.18 E-value=1.6e-06 Score=76.16 Aligned_cols=88 Identities=14% Similarity=-0.059 Sum_probs=60.0
Q ss_pred CCeEEEE-ccccHHHHH---HhccC-C--cEEEEeCCHHHHHhcc--cccCCCC-CeEEEEccCCCCCCCCCCccEEEEc
Q psy8015 27 RLDCLAL-TSNTKQSTT---LPTFI-P--NSFNINVYYYLSGGPL--SSTIDPD-HDYDLIADGRASFGDNGPYDAIHVG 96 (165)
Q Consensus 27 ~~~vLei-~GsG~~t~~---la~~~-~--~V~aiD~~~~~~~~A~--~~~~~~~-nV~~~~gD~~~~~~~~~~fD~I~i~ 96 (165)
...|||| ||+|-+... .+... . +|+|+|.|+ ++..|+ .+..+.. .|++++||..+... .+++|+|+.-
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~L-PEKVDIIVSE 435 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVA-PEKADIIVSE 435 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCC-SSCEEEEECC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccC-CcccCEEEEE
Confidence 4579999 999988433 33322 2 689999998 666674 3444554 49999999976322 3689999874
Q ss_pred CCC-----CCchH---HHHhccccCcEE
Q psy8015 97 AAY-----PRYPE---IFIHHLKSGGRL 116 (165)
Q Consensus 97 ~~~-----~~~p~---~l~~~LkpgG~l 116 (165)
... +.+|+ ..-+.|||||++
T Consensus 436 wMG~fLl~E~mlevL~Ardr~LKPgGim 463 (637)
T 4gqb_A 436 LLGSFADNELSPECLDGAQHFLKDDGVS 463 (637)
T ss_dssp CCBTTBGGGCHHHHHHHHGGGEEEEEEE
T ss_pred cCcccccccCCHHHHHHHHHhcCCCcEE
Confidence 221 23443 335889999986
No 291
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.12 E-value=1.4e-06 Score=77.17 Aligned_cols=91 Identities=12% Similarity=-0.116 Sum_probs=60.5
Q ss_pred CCeEEEE-ccccHHHH---HHhccC------------CcEEEEeCCHHHHHhcc-cccCCCCC-eEEEEccCCCCCC---
Q psy8015 27 RLDCLAL-TSNTKQST---TLPTFI------------PNSFNINVYYYLSGGPL-SSTIDPDH-DYDLIADGRASFG--- 85 (165)
Q Consensus 27 ~~~vLei-~GsG~~t~---~la~~~------------~~V~aiD~~~~~~~~A~-~~~~~~~n-V~~~~gD~~~~~~--- 85 (165)
+..|||| ||+|-++. ..++.. .+|+|+|.|+.+....+ ....+..+ |+++++|..+...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 5689999 99999963 222212 29999999997765554 22245555 9999999876322
Q ss_pred --CCCCccEEEEcCCCC----C-chH---HHHhccccCcEEE
Q psy8015 86 --DNGPYDAIHVGAAYP----R-YPE---IFIHHLKSGGRLV 117 (165)
Q Consensus 86 --~~~~fD~I~i~~~~~----~-~p~---~l~~~LkpgG~lv 117 (165)
..++.|+|+.-..-. + .|+ ..-+.|||||+++
T Consensus 490 ~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 136899998853321 2 222 3357899999743
No 292
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.08 E-value=6.7e-06 Score=65.62 Aligned_cols=52 Identities=6% Similarity=-0.075 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL 64 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~ 64 (165)
.....++++... .+++.|||+ ||||..+..++++..+++++|+++++++.|+
T Consensus 222 ~~l~~~~i~~~~--~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~ 274 (297)
T 2zig_A 222 LELAERLVRMFS--FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAK 274 (297)
T ss_dssp HHHHHHHHHHHC--CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 456777888764 689999999 9999999999999999999999999999996
No 293
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.04 E-value=2.4e-05 Score=62.69 Aligned_cols=111 Identities=13% Similarity=-0.046 Sum_probs=73.2
Q ss_pred chHHHHHHHHHHhc--CCCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc-cccCCCCCeEEEEc-cCCC
Q psy8015 10 VSGAVAKYVTYLSG--HSKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL-SSTIDPDHDYDLIA-DGRA 82 (165)
Q Consensus 10 ~~~~~~~~l~~l~~--~~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~-~~~~~~~nV~~~~g-D~~~ 82 (165)
.++..-+|+++... ..++++|||+ |+.|.++..+++.. ..|+++|+...+...++ ....+.+-+.+..+ |..
T Consensus 63 rSRaa~KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~- 141 (300)
T 3eld_A 63 VSRGAAKIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVF- 141 (300)
T ss_dssp SSTTHHHHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTT-
T ss_pred cchHHHHHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceee-
Confidence 56666677776643 2589999999 99999999999764 47999999876544333 12223222444333 322
Q ss_pred CCCCCCCccEEEEcCCCCC-ch--H---------HHHhccccC-cEEEEEecC
Q psy8015 83 SFGDNGPYDAIHVGAAYPR-YP--E---------IFIHHLKSG-GRLVIPIGD 122 (165)
Q Consensus 83 ~~~~~~~fD~I~i~~~~~~-~p--~---------~l~~~Lkpg-G~lvi~~~~ 122 (165)
.+ ..++||+|+++.+... .+ | -..+.|+|| |.+|+=+=.
T Consensus 142 ~l-~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 142 TM-PTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp TS-CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred ec-CCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 12 2468999999987761 11 1 235889999 999986544
No 294
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.03 E-value=3.3e-05 Score=61.92 Aligned_cols=109 Identities=11% Similarity=-0.064 Sum_probs=78.3
Q ss_pred chHHHHHHHHHHhcC--CCCCeEEEE-ccccHHHHHHhccC--CcEEEEeCCHHHHHhcc-cccCCCCCeEEEEc-cCCC
Q psy8015 10 VSGAVAKYVTYLSGH--SKRLDCLAL-TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPL-SSTIDPDHDYDLIA-DGRA 82 (165)
Q Consensus 10 ~~~~~~~~l~~l~~~--~~~~~vLei-~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~-~~~~~~~nV~~~~g-D~~~ 82 (165)
+|+...+|.++.... .++++|||+ |++|.++...+... .+|+|+|+-..=.+.-+ .+.++...|.++.+ |...
T Consensus 76 ~SR~~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~ 155 (321)
T 3lkz_A 76 VSRGTAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFY 155 (321)
T ss_dssp SSTHHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTS
T ss_pred cchHHHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhh
Confidence 677888888877543 688999999 99999999777764 48999999776444333 34566656999998 8754
Q ss_pred CCCCCCCccEEEEcCCCCC-ch--H---------HHHhccccC-cEEEEEe
Q psy8015 83 SFGDNGPYDAIHVGAAYPR-YP--E---------IFIHHLKSG-GRLVIPI 120 (165)
Q Consensus 83 ~~~~~~~fD~I~i~~~~~~-~p--~---------~l~~~Lkpg-G~lvi~~ 120 (165)
..+ .++|.|+++-+... .| | -+.++|++| |-+++=+
T Consensus 156 l~~--~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KV 204 (321)
T 3lkz_A 156 RPS--ECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKV 204 (321)
T ss_dssp SCC--CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CCC--CCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEE
Confidence 333 67999999977332 11 1 134778888 7777643
No 295
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.91 E-value=3.5e-05 Score=62.91 Aligned_cols=86 Identities=13% Similarity=-0.060 Sum_probs=66.0
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC---C
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS---F 84 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~---~ 84 (165)
=+....++.|. ..|+..++|. +|.|.-|..+++.. ++|+++|.|+++++.|+ ++..+++++++++..+. +
T Consensus 44 VLl~Evl~~L~-i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~--rL~~~Rv~lv~~nF~~l~~~L 120 (347)
T 3tka_A 44 VLLDEAVNGLN-IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK--TIDDPRFSIIHGPFSALGEYV 120 (347)
T ss_dssp TTTHHHHHHTC-CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT--TCCCTTEEEEESCGGGHHHHH
T ss_pred ccHHHHHHhhC-CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH--hhcCCcEEEEeCCHHHHHHHH
Confidence 35567888885 4899999999 99999999888764 68999999999999985 33346799999986431 1
Q ss_pred CC---CCCccEEEEcCCCC
Q psy8015 85 GD---NGPYDAIHVGAAYP 100 (165)
Q Consensus 85 ~~---~~~fD~I~i~~~~~ 100 (165)
.+ .+++|.|+.+-++.
T Consensus 121 ~~~g~~~~vDgILfDLGVS 139 (347)
T 3tka_A 121 AERDLIGKIDGILLDLGVS 139 (347)
T ss_dssp HHTTCTTCEEEEEEECSCC
T ss_pred HhcCCCCcccEEEECCccC
Confidence 11 13699999985443
No 296
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.89 E-value=2.8e-05 Score=63.85 Aligned_cols=69 Identities=14% Similarity=-0.090 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhcCC------CCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC
Q psy8015 12 GAVAKYVTYLSGHS------KRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA 82 (165)
Q Consensus 12 ~~~~~~l~~l~~~~------~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~ 82 (165)
....++++.+. .. +++.|||| .|.|.+|..|... .++|+++|+|++++...+... ..+|++++++|+..
T Consensus 39 ~i~~~Iv~~~~-l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 39 TVYNKIFDKLD-LTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-EGSPLQILKRDPYD 116 (353)
T ss_dssp HHHHHHHHHHC-GGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-TTSSCEEECSCTTC
T ss_pred HHHHHHHHhcc-CCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-cCCCEEEEECCccc
Confidence 45667777774 33 36899999 9999999999975 579999999999998775211 34689999999953
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.84 E-value=6e-05 Score=59.35 Aligned_cols=110 Identities=13% Similarity=-0.077 Sum_probs=71.8
Q ss_pred CCchHHHHHHHHHHhcC--CCCCeEEEE-ccccHHHHHHhcc--CCcEEEEeCCHHHHHhccccc--CCCCCeEEEEc-c
Q psy8015 8 GSVSGAVAKYVTYLSGH--SKRLDCLAL-TSNTKQSTTLPTF--IPNSFNINVYYYLSGGPLSST--IDPDHDYDLIA-D 79 (165)
Q Consensus 8 ~~~~~~~~~~l~~l~~~--~~~~~vLei-~GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~~~~--~~~~nV~~~~g-D 79 (165)
+-.++...+|+|+-... +|+++|+|+ |+.|..+..+++. ++.|.+.++..+. ..--... .|..=+.++.+ |
T Consensus 53 ~yRSRAayKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~~P~~~~~~Gv~~i~~~~G~D 131 (269)
T 2px2_A 53 HPVSRGTAKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HEEPMLMQSYGWNIVTMKSGVD 131 (269)
T ss_dssp CCSSTHHHHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SCCCCCCCSTTGGGEEEECSCC
T ss_pred CcccHHHHHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-ccCCCcccCCCceEEEeeccCC
Confidence 33678888888876543 789999999 9999999999998 5555565554442 1111111 12211366657 8
Q ss_pred CCCCCCCCCCccEEEEcCCCCC-ch-----------HHHHhccccCc-EEEEEe
Q psy8015 80 GRASFGDNGPYDAIHVGAAYPR-YP-----------EIFIHHLKSGG-RLVIPI 120 (165)
Q Consensus 80 ~~~~~~~~~~fD~I~i~~~~~~-~p-----------~~l~~~LkpgG-~lvi~~ 120 (165)
..+. +..++|+|+++.+... .+ +-..++|+||| -+++=+
T Consensus 132 f~~~--~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKV 183 (269)
T 2px2_A 132 VFYK--PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKI 183 (269)
T ss_dssp GGGS--CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred ccCC--CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEE
Confidence 7652 2357999999987641 11 12458999999 777744
No 298
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.65 E-value=7.5e-05 Score=58.37 Aligned_cols=52 Identities=6% Similarity=-0.068 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL 64 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~ 64 (165)
.....++++... .+++.|||. ||||..+....++..+++++|+++..++.|+
T Consensus 199 ~~l~~~~i~~~~--~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 199 RDLIERIIRASS--NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQAN 251 (260)
T ss_dssp HHHHHHHHHHHC--CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 456777887763 689999999 9999999999999999999999999999985
No 299
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.34 E-value=0.0011 Score=53.54 Aligned_cols=89 Identities=11% Similarity=0.029 Sum_probs=65.3
Q ss_pred cCCCCCeEEEE-ccc-cHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCC
Q psy8015 23 GHSKRLDCLAL-TSN-TKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAY 99 (165)
Q Consensus 23 ~~~~~~~vLei-~Gs-G~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~ 99 (165)
..+++++||-. +|. |..+..+|+.. .+|+++|.+++-.+.++ ++|.+.+- .|. +.+.. .+|+||-..+.
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~--~lGa~~v~---~~~-~~~~~--~~D~vid~~g~ 244 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL--SMGVKHFY---TDP-KQCKE--ELDFIISTIPT 244 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH--HTTCSEEE---SSG-GGCCS--CEEEEEECCCS
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH--hcCCCeec---CCH-HHHhc--CCCEEEECCCc
Confidence 45789999998 654 78888888765 48999999998888774 45654432 332 22222 79999877666
Q ss_pred CCchHHHHhccccCcEEEEE
Q psy8015 100 PRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 100 ~~~p~~l~~~LkpgG~lvi~ 119 (165)
+...+...+.|+|+|+++..
T Consensus 245 ~~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 245 HYDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp CCCHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHHHhcCCEEEEE
Confidence 65667778999999998875
No 300
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.30 E-value=0.0019 Score=53.47 Aligned_cols=74 Identities=7% Similarity=-0.115 Sum_probs=47.2
Q ss_pred CCeEEEE-ccccHHHHHHhcc--------C---------C--cEEEEeCC-----------HHHHHhcccccCCC-CCeE
Q psy8015 27 RLDCLAL-TSNTKQSTTLPTF--------I---------P--NSFNINVY-----------YYLSGGPLSSTIDP-DHDY 74 (165)
Q Consensus 27 ~~~vLei-~GsG~~t~~la~~--------~---------~--~V~aiD~~-----------~~~~~~A~~~~~~~-~nV~ 74 (165)
.-+|+|+ |++|..|..+... + . +|+.-|+- +.+.+.++. ..|. .+..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~-~~g~~~~~~ 131 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK-ENGRKIGSC 131 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-HTCCCTTSE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh-hccCCCCce
Confidence 4789999 9999999877654 0 1 36666665 444443321 1121 2346
Q ss_pred EEEccCCC---CCCCCCCccEEEEcCCCCC
Q psy8015 75 DLIADGRA---SFGDNGPYDAIHVGAAYPR 101 (165)
Q Consensus 75 ~~~gD~~~---~~~~~~~fD~I~i~~~~~~ 101 (165)
|+.|.... -+.+.++||.|+.+.+++.
T Consensus 132 f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHW 161 (384)
T 2efj_A 132 LIGAMPGSFYSRLFPEESMHFLHSCYCLHW 161 (384)
T ss_dssp EEEECCSCTTSCCSCTTCEEEEEEESCTTB
T ss_pred EEEecchhhhhccCCCCceEEEEecceeee
Confidence 77766532 3344689999999998874
No 301
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.22 E-value=0.00057 Score=56.49 Aligned_cols=95 Identities=14% Similarity=0.106 Sum_probs=57.7
Q ss_pred CCeEEEE-ccccHHHHHHhcc--------C---------CcEEEEeCCHHHHHhc-c-ccc----C--------CCCCeE
Q psy8015 27 RLDCLAL-TSNTKQSTTLPTF--------I---------PNSFNINVYYYLSGGP-L-SST----I--------DPDHDY 74 (165)
Q Consensus 27 ~~~vLei-~GsG~~t~~la~~--------~---------~~V~aiD~~~~~~~~A-~-~~~----~--------~~~nV~ 74 (165)
..+|+|+ ||+|..|..+... + -+|+.-|+-...-... + +.. + ...+-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 5789999 9999999877321 1 1466666544432111 1 100 0 001223
Q ss_pred EEEccC---CCCCCCCCCccEEEEcCCCCCc---hHHH-----------------------------------------H
Q psy8015 75 DLIADG---RASFGDNGPYDAIHVGAAYPRY---PEIF-----------------------------------------I 107 (165)
Q Consensus 75 ~~~gD~---~~~~~~~~~fD~I~i~~~~~~~---p~~l-----------------------------------------~ 107 (165)
|+.|.+ +.-+.+.++||.|+.+.+.+.+ |+.+ .
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444433 2333456899999999998753 4322 7
Q ss_pred hccccCcEEEEEec
Q psy8015 108 HHLKSGGRLVIPIG 121 (165)
Q Consensus 108 ~~LkpgG~lvi~~~ 121 (165)
+.|+|||++|+.+.
T Consensus 213 ~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 213 AEVKRGGAMFLVCL 226 (374)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HHhCCCCEEEEEEe
Confidence 89999999999875
No 302
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.10 E-value=0.00048 Score=55.83 Aligned_cols=92 Identities=12% Similarity=-0.044 Sum_probs=63.1
Q ss_pred cCCCCCeEEEE-ccc-cHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeEEEEcc------CCCC---CCCCCC
Q psy8015 23 GHSKRLDCLAL-TSN-TKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIAD------GRAS---FGDNGP 89 (165)
Q Consensus 23 ~~~~~~~vLei-~Gs-G~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD------~~~~---~~~~~~ 89 (165)
..+++++||-+ +|. |..+..+|+..+ +|+++|.+++..+.++ ++|.+. ++..+ ..+. ... ..
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~--~lGa~~--vi~~~~~~~~~~~~~i~~~~~-~g 242 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK--EIGADL--VLQISKESPQEIARKVEGQLG-CK 242 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH--HTTCSE--EEECSSCCHHHHHHHHHHHHT-SC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH--HhCCCE--EEcCcccccchHHHHHHHHhC-CC
Confidence 45789999999 654 888888888653 7999999999888775 446542 22211 0000 011 46
Q ss_pred ccEEEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 90 YDAIHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 90 fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
||+||-....+...+..++.|+|||+++..
T Consensus 243 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 243 PEVTIECTGAEASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp CSEEEECSCCHHHHHHHHHHSCTTCEEEEC
T ss_pred CCEEEECCCChHHHHHHHHHhcCCCEEEEE
Confidence 999987665544456678999999998874
No 303
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=97.10 E-value=0.00049 Score=55.61 Aligned_cols=93 Identities=9% Similarity=-0.053 Sum_probs=64.4
Q ss_pred cCCCCCeEEEE-ccc-cHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeEEEEc---cCCC---CCCCCCCccE
Q psy8015 23 GHSKRLDCLAL-TSN-TKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIA---DGRA---SFGDNGPYDA 92 (165)
Q Consensus 23 ~~~~~~~vLei-~Gs-G~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~g---D~~~---~~~~~~~fD~ 92 (165)
..+++++||=+ +|. |..+..+|+..+ +|+++|.+++..+.++ ++|.+. ++.. |..+ .......||+
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~--~lGa~~--vi~~~~~~~~~~v~~~t~g~g~D~ 238 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL--EYGATD--IINYKNGDIVEQILKATDGKGVDK 238 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH--HHTCCE--EECGGGSCHHHHHHHHTTTCCEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH--HhCCce--EEcCCCcCHHHHHHHHcCCCCCCE
Confidence 45889999998 554 788888888754 7999999999888775 334432 1211 1100 0112236999
Q ss_pred EEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 93 IHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 93 I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
||-....+...+..++.|+|||+++..
T Consensus 239 v~d~~g~~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 239 VVIAGGDVHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp EEECSSCTTHHHHHHHHEEEEEEEEEC
T ss_pred EEECCCChHHHHHHHHHHhcCCEEEEe
Confidence 987776666677788999999998874
No 304
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=97.09 E-value=0.0011 Score=53.54 Aligned_cols=93 Identities=13% Similarity=-0.000 Sum_probs=62.6
Q ss_pred cCCCCCeEEEE-cc-ccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEcc----CCCCCC---C---CCC
Q psy8015 23 GHSKRLDCLAL-TS-NTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIAD----GRASFG---D---NGP 89 (165)
Q Consensus 23 ~~~~~~~vLei-~G-sG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD----~~~~~~---~---~~~ 89 (165)
..+++++||-+ +| .|..++.+|+.. .+|+++|.+++..+.++ ++|.+. ++..+ ..+... . ...
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~--~lGa~~--~~~~~~~~~~~~~i~~~~~~~~g~g 240 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK--NCGADV--TLVVDPAKEEESSIIERIRSAIGDL 240 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--HTTCSE--EEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH--HhCCCE--EEcCcccccHHHHHHHHhccccCCC
Confidence 45789999999 55 378888888765 46999999999888775 445542 22211 100000 0 246
Q ss_pred ccEEEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 90 YDAIHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 90 fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
+|+||-....+...+..++.|+++|+++..
T Consensus 241 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 241 PNVTIDCSGNEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp CSEEEECSCCHHHHHHHHHHSCTTCEEEEC
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEE
Confidence 999987665544456678999999998874
No 305
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.06 E-value=0.00048 Score=56.69 Aligned_cols=92 Identities=8% Similarity=-0.047 Sum_probs=62.4
Q ss_pred cCCCCCeEEEE-ccc-cHHHHHHhccC-C-cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC-------CCCCCCcc
Q psy8015 23 GHSKRLDCLAL-TSN-TKQSTTLPTFI-P-NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS-------FGDNGPYD 91 (165)
Q Consensus 23 ~~~~~~~vLei-~Gs-G~~t~~la~~~-~-~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~-------~~~~~~fD 91 (165)
..+++++||-+ +|. |.++..+|+.. . +|+++|.+++..+.++ ++|. +++.-+..+. ......||
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~--~lGa---~~i~~~~~~~~~~~~~~~~~g~g~D 256 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS--DAGF---ETIDLRNSAPLRDQIDQILGKPEVD 256 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH--TTTC---EEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH--HcCC---cEEcCCCcchHHHHHHHHhCCCCCC
Confidence 45789999999 765 88888888764 3 8999999999888775 4565 2232211110 01123699
Q ss_pred EEEEcCCCCC--------------chHHHHhccccCcEEEEE
Q psy8015 92 AIHVGAAYPR--------------YPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 92 ~I~i~~~~~~--------------~p~~l~~~LkpgG~lvi~ 119 (165)
+||-....+. ..+..++.|++||+++..
T Consensus 257 vvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 257 CGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp EEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred EEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 9987665443 245678999999998763
No 306
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.99 E-value=0.00057 Score=55.84 Aligned_cols=91 Identities=13% Similarity=0.079 Sum_probs=63.7
Q ss_pred cCCCCCeEEEE-cc-ccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEc---cCCCCCCCCCCccEEEEc
Q psy8015 23 GHSKRLDCLAL-TS-NTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIA---DGRASFGDNGPYDAIHVG 96 (165)
Q Consensus 23 ~~~~~~~vLei-~G-sG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~g---D~~~~~~~~~~fD~I~i~ 96 (165)
..+++++||-+ +| .|..+..+|+.. .+|+++|.+++..+.++ ++|.+.+ +.- |..+... ..||+||-.
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~--~lGa~~v--i~~~~~~~~~~~~--~g~Dvvid~ 264 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK--ALGADEV--VNSRNADEMAAHL--KSFDFILNT 264 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH--HHTCSEE--EETTCHHHHHTTT--TCEEEEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HcCCcEE--eccccHHHHHHhh--cCCCEEEEC
Confidence 45789999999 65 378888888765 47999999999888775 3454322 211 1111111 479999887
Q ss_pred CCCCCchHHHHhccccCcEEEEE
Q psy8015 97 AAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 97 ~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
...+...+...+.|+++|+++..
T Consensus 265 ~g~~~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 265 VAAPHNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp CSSCCCHHHHHTTEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHhccCCEEEEe
Confidence 66665667778999999998763
No 307
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.88 E-value=0.0022 Score=51.63 Aligned_cols=67 Identities=1% Similarity=-0.124 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADG 80 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~ 80 (165)
.....++++... .+++.|||- ||||..+....++..+.+++|+++...+.|+ +++.+. ..+.+.+|+
T Consensus 239 ~~l~~~~i~~~~--~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~~~-~~~~~~~~~ 308 (323)
T 1boo_A 239 AKLPEFFIRMLT--EPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNNI-SEEKITDIY 308 (323)
T ss_dssp THHHHHHHHHHC--CTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSCS-CHHHHHHHH
T ss_pred HHHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhccc-chHHHHHHH
Confidence 456778887763 689999999 9999999988888899999999999999985 554443 233344443
No 308
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.82 E-value=0.00043 Score=55.61 Aligned_cols=93 Identities=9% Similarity=0.018 Sum_probs=63.7
Q ss_pred cCCCCCeEEEE-cc-ccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC---CCC-CCCCccEEEE
Q psy8015 23 GHSKRLDCLAL-TS-NTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA---SFG-DNGPYDAIHV 95 (165)
Q Consensus 23 ~~~~~~~vLei-~G-sG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~---~~~-~~~~fD~I~i 95 (165)
..+++++||-. +| .|..+..+|+.. .+|+++|.+++..+.++ ++|.+.+ +..+..+ ... ..+.+|.++.
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~--~lGa~~~--i~~~~~~~~~~~~~~~g~~d~vid 238 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR--RLGAEVA--VNARDTDPAAWLQKEIGGAHGVLV 238 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHH--HTTCSEE--EETTTSCHHHHHHHHHSSEEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH--HcCCCEE--EeCCCcCHHHHHHHhCCCCCEEEE
Confidence 34789999999 55 488888888865 48999999999888774 3454321 2211110 000 0136899987
Q ss_pred cCCCCCchHHHHhccccCcEEEEE
Q psy8015 96 GAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 96 ~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
........+...+.|+++|+++..
T Consensus 239 ~~g~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 239 TAVSPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp SSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred eCCCHHHHHHHHHHhccCCEEEEe
Confidence 765555666778999999998874
No 309
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.82 E-value=0.00076 Score=55.22 Aligned_cols=92 Identities=13% Similarity=-0.055 Sum_probs=63.4
Q ss_pred CCCCCeEEEE-cc-ccHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeEEEEcc------CCC---CCCCCCCc
Q psy8015 24 HSKRLDCLAL-TS-NTKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIAD------GRA---SFGDNGPY 90 (165)
Q Consensus 24 ~~~~~~vLei-~G-sG~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD------~~~---~~~~~~~f 90 (165)
.+++++||-. +| .|..++.+|+..+ +|++++.+++-.+.++ ++|.+.+ +..+ ..+ .......+
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~--~lGa~~v--i~~~~~~~~~~~~~v~~~~~g~g~ 268 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE--EIGADLT--LNRRETSVEERRKAIMDITHGRGA 268 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH--HTTCSEE--EETTTSCHHHHHHHHHHHTTTSCE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH--HcCCcEE--EeccccCcchHHHHHHHHhCCCCC
Confidence 4689999999 43 5777888887665 8999999999888775 4565422 2211 000 01112369
Q ss_pred cEEEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 91 DAIHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 91 D~I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
|+||-....+...+...+.|+++|+++..
T Consensus 269 Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 269 DFILEATGDSRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp EEEEECSSCTTHHHHHHHHEEEEEEEEEC
T ss_pred cEEEECCCCHHHHHHHHHHHhcCCEEEEE
Confidence 99987766666667778999999998774
No 310
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.81 E-value=0.00019 Score=58.45 Aligned_cols=92 Identities=8% Similarity=0.014 Sum_probs=62.9
Q ss_pred cCCCCCeEEEE-ccc-cHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeEEEEccCC---C---CCCCCCCccE
Q psy8015 23 GHSKRLDCLAL-TSN-TKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR---A---SFGDNGPYDA 92 (165)
Q Consensus 23 ~~~~~~~vLei-~Gs-G~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~---~---~~~~~~~fD~ 92 (165)
..+++++||-+ +|. |..++.+|+..+ +|+++|.+++..+.++ ++|.+. ++..+.. + .... +.||+
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~--~lGa~~--vi~~~~~~~~~~~~~~~~-gg~D~ 261 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAK--QLGATH--VINSKTQDPVAAIKEITD-GGVNF 261 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH--HHTCSE--EEETTTSCHHHHHHHHTT-SCEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH--HcCCCE--EecCCccCHHHHHHHhcC-CCCcE
Confidence 34789999999 765 888888887643 6999999999988875 334432 1221110 0 0111 26999
Q ss_pred EEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 93 IHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 93 I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
||-....+...+...+.|+++|+++..
T Consensus 262 vid~~g~~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 262 ALESTGSPEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEECSCCHHHHHHHHHTEEEEEEEEEC
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEe
Confidence 987665545556778999999998874
No 311
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.72 E-value=0.0018 Score=53.25 Aligned_cols=95 Identities=16% Similarity=0.001 Sum_probs=62.8
Q ss_pred CCeEEEE-ccccHHHHHHhccC------------------CcEEEEeCCHHHHHhc-c-cccCCC-CCeEEEEccCC---
Q psy8015 27 RLDCLAL-TSNTKQSTTLPTFI------------------PNSFNINVYYYLSGGP-L-SSTIDP-DHDYDLIADGR--- 81 (165)
Q Consensus 27 ~~~vLei-~GsG~~t~~la~~~------------------~~V~aiD~~~~~~~~A-~-~~~~~~-~nV~~~~gD~~--- 81 (165)
.-+|+|+ |++|..|..+.... -+|+.-|+-...-... + +..... .+..|+.|...
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 4679999 99999997665541 1577888766666544 2 221111 13466666543
Q ss_pred CCCCCCCCccEEEEcCCCCC---chHH------------------------------------HHhccccCcEEEEEec
Q psy8015 82 ASFGDNGPYDAIHVGAAYPR---YPEI------------------------------------FIHHLKSGGRLVIPIG 121 (165)
Q Consensus 82 ~~~~~~~~fD~I~i~~~~~~---~p~~------------------------------------l~~~LkpgG~lvi~~~ 121 (165)
.-+.+.+++|.++.+.+++. +|+. -.+.|+|||++|+...
T Consensus 132 ~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 33445689999999988874 3321 1689999999999875
No 312
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.71 E-value=0.00067 Score=55.40 Aligned_cols=94 Identities=13% Similarity=-0.009 Sum_probs=62.3
Q ss_pred cCCCCCeEEEE-ccc-cHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeE-EEEccCCC---C---CCCCCCcc
Q psy8015 23 GHSKRLDCLAL-TSN-TKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDY-DLIADGRA---S---FGDNGPYD 91 (165)
Q Consensus 23 ~~~~~~~vLei-~Gs-G~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~-~~~gD~~~---~---~~~~~~fD 91 (165)
..+++++||=. +|. |..+..+|+..+ +|+++|.+++..+.++ ++|.+.+- ....|..+ . +. .+.||
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~--~lGa~~vi~~~~~~~~~~i~~~~~~~-~gg~D 255 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAE--EVGATATVDPSAGDVVEAIAGPVGLV-PGGVD 255 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH--HHTCSEEECTTSSCHHHHHHSTTSSS-TTCEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH--HcCCCEEECCCCcCHHHHHHhhhhcc-CCCCC
Confidence 45899999988 543 777888887653 7999999999888775 23443211 00111100 0 11 23799
Q ss_pred EEEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 92 AIHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 92 ~I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
+||-..+.....+...+.|++||+++..
T Consensus 256 vvid~~G~~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 256 VVIECAGVAETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp EEEECSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCCHHHHHHHHHHhccCCEEEEE
Confidence 9887655445556778999999998874
No 313
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.54 E-value=0.0036 Score=50.45 Aligned_cols=52 Identities=13% Similarity=0.016 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCH---HHHHhcc
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYY---YLSGGPL 64 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~---~~~~~A~ 64 (165)
.....++++... .+++.|||- ||||..+.....+..+.+++|+++ +.++.|+
T Consensus 229 ~~l~~~~i~~~~--~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~ 284 (319)
T 1eg2_A 229 AAVIERLVRALS--HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQL 284 (319)
T ss_dssp HHHHHHHHHHHS--CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHH
T ss_pred HHHHHHHHHHhC--CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHH
Confidence 456778888773 689999999 999999998888899999999999 9999885
No 314
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.50 E-value=0.0026 Score=52.11 Aligned_cols=92 Identities=5% Similarity=-0.044 Sum_probs=61.4
Q ss_pred cCCCCCeEEEE-ccc-cHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCC-------CCCCCcc
Q psy8015 23 GHSKRLDCLAL-TSN-TKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASF-------GDNGPYD 91 (165)
Q Consensus 23 ~~~~~~~vLei-~Gs-G~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~-------~~~~~fD 91 (165)
..+++++||-+ +|. |.++..+|+..+ +|+++|.+++.++.|+ ++|.+ .+.-+..+.+ .....+|
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~--~lGa~---~i~~~~~~~~~~~v~~~t~g~g~D 256 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAK--AQGFE---IADLSLDTPLHEQIAALLGEPEVD 256 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH--HTTCE---EEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH--HcCCc---EEccCCcchHHHHHHHHhCCCCCC
Confidence 45789999988 544 778888888653 6999999999988885 45652 2221111100 1123699
Q ss_pred EEEEcCCCCC---------------chHHHHhccccCcEEEEE
Q psy8015 92 AIHVGAAYPR---------------YPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 92 ~I~i~~~~~~---------------~p~~l~~~LkpgG~lvi~ 119 (165)
+||-..+.+. ..+...+.|++||+++..
T Consensus 257 vvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 257 CAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp EEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 9987655432 335678999999998763
No 315
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.43 E-value=0.0008 Score=54.57 Aligned_cols=91 Identities=18% Similarity=0.175 Sum_probs=61.7
Q ss_pred cCCCCCeEEEE-cc-ccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEc----cCCCCCCCCCCccEEEE
Q psy8015 23 GHSKRLDCLAL-TS-NTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIA----DGRASFGDNGPYDAIHV 95 (165)
Q Consensus 23 ~~~~~~~vLei-~G-sG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~g----D~~~~~~~~~~fD~I~i 95 (165)
..+++++||-+ +| .|..+..+|+.. .+|+++|.+++-.+.++ ++|.+.+ +.- |..+... +.||+||-
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~--~lGa~~v--~~~~~~~~~~~~~~--~~~D~vid 249 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAM--KMGADHY--IATLEEGDWGEKYF--DTFDLIVV 249 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH--HHTCSEE--EEGGGTSCHHHHSC--SCEEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--HcCCCEE--EcCcCchHHHHHhh--cCCCEEEE
Confidence 45789999999 53 477777777754 48999999998888775 2454322 221 1111111 47999988
Q ss_pred cCCC--CCchHHHHhccccCcEEEEE
Q psy8015 96 GAAY--PRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 96 ~~~~--~~~p~~l~~~LkpgG~lvi~ 119 (165)
.... +...+..++.|++||+++..
T Consensus 250 ~~g~~~~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 250 CASSLTDIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp CCSCSTTCCTTTGGGGEEEEEEEEEC
T ss_pred CCCCCcHHHHHHHHHHhcCCCEEEEe
Confidence 7665 45555667999999998764
No 316
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.41 E-value=0.0063 Score=50.13 Aligned_cols=70 Identities=11% Similarity=0.015 Sum_probs=53.0
Q ss_pred CeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCC--------CCCCccEEEEcC
Q psy8015 28 LDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFG--------DNGPYDAIHVGA 97 (165)
Q Consensus 28 ~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~--------~~~~fD~I~i~~ 97 (165)
.+++|+ ||+|.++.-+.+.+ ..|.++|+++.+++..+.. ..+..++.+|..+... ....+|+|+.+.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N---~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggp 79 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAIN---FPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGP 79 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHH---CTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHh---CCCCceEecChhhcCHHHHHhhcccCCCeeEEEecC
Confidence 589999 99999998887766 4578999999998876532 3467888899865321 135799999886
Q ss_pred CCC
Q psy8015 98 AYP 100 (165)
Q Consensus 98 ~~~ 100 (165)
.+.
T Consensus 80 PCQ 82 (376)
T 3g7u_A 80 PCQ 82 (376)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 317
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.39 E-value=0.0092 Score=48.18 Aligned_cols=95 Identities=8% Similarity=-0.128 Sum_probs=62.6
Q ss_pred cCCCCCeEEEE-cc-ccHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeEEEEc-----cCCC---CCCCCCCc
Q psy8015 23 GHSKRLDCLAL-TS-NTKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIA-----DGRA---SFGDNGPY 90 (165)
Q Consensus 23 ~~~~~~~vLei-~G-sG~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~g-----D~~~---~~~~~~~f 90 (165)
..++|++||=. +| .|..+..+|+..+ +|+++|.+++-.+.++. ++..-+.+... |..+ .......+
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~--l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~ 253 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE--ICPEVVTHKVERLSAEESAKKIVESFGGIEP 253 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH--HCTTCEEEECCSCCHHHHHHHHHHHTSSCCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH--hchhcccccccccchHHHHHHHHHHhCCCCC
Confidence 35789999988 54 3788888888754 59999999999998862 12111222211 1100 01113469
Q ss_pred cEEEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 91 DAIHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 91 D~I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
|++|-..+.+...+...+.|++||+++..
T Consensus 254 Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 254 AVALECTGVESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp SEEEECSCCHHHHHHHHHHSCTTCEEEEC
T ss_pred CEEEECCCChHHHHHHHHHhcCCCEEEEE
Confidence 99987666554556678999999998874
No 318
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.36 E-value=0.0018 Score=52.73 Aligned_cols=93 Identities=9% Similarity=-0.060 Sum_probs=62.1
Q ss_pred cCCCCCeEEEE-cc-ccHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeEEEEc-cCCCCCC------CCCCcc
Q psy8015 23 GHSKRLDCLAL-TS-NTKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIA-DGRASFG------DNGPYD 91 (165)
Q Consensus 23 ~~~~~~~vLei-~G-sG~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~g-D~~~~~~------~~~~fD 91 (165)
..+++++||-+ +| .|..+..+|+..+ +|+++|.+++..+.++ ++|.+.+ +.- +..+.+. ..+.+|
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~--~lGa~~v--i~~~~~~~~~~~~~~~~~~~g~D 264 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK--VFGATDF--VNPNDHSEPISQVLSKMTNGGVD 264 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH--HTTCCEE--ECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH--HhCCceE--EeccccchhHHHHHHHHhCCCCC
Confidence 34789999999 54 4778888887653 7999999999888775 4455422 211 1000010 013699
Q ss_pred EEEEcCCCCCchHHHHhccccC-cEEEEE
Q psy8015 92 AIHVGAAYPRYPEIFIHHLKSG-GRLVIP 119 (165)
Q Consensus 92 ~I~i~~~~~~~p~~l~~~Lkpg-G~lvi~ 119 (165)
+||-....+...+..++.|+++ |+++..
T Consensus 265 ~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 265 FSLECVGNVGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp EEEECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred EEEECCCCHHHHHHHHHHhhcCCcEEEEE
Confidence 9987665544556778999999 998874
No 319
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.36 E-value=0.0023 Score=50.21 Aligned_cols=94 Identities=7% Similarity=-0.015 Sum_probs=64.4
Q ss_pred CCCeEEEE-ccccHHHHHHhcc---------CCcEEEEeCCHHHHH---------------------------hc-----
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTF---------IPNSFNINVYYYLSG---------------------------GP----- 63 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~---------~~~V~aiD~~~~~~~---------------------------~A----- 63 (165)
-...++|+ +--|..+..++.+ -++|++.|.-+.+-+ ..
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 35699999 9999988887653 268999992221111 10
Q ss_pred ccccCCC--CCeEEEEccCCCCCCC------CCCccEEEEcCCCC-C---chHHHHhccccCcEEEEE
Q psy8015 64 LSSTIDP--DHDYDLIADGRASFGD------NGPYDAIHVGAAYP-R---YPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 64 ~~~~~~~--~nV~~~~gD~~~~~~~------~~~fD~I~i~~~~~-~---~p~~l~~~LkpgG~lvi~ 119 (165)
+.+.++. +||+++.|++.+.++. ..+||.+++++... . .-+.+...|+|||.+++-
T Consensus 149 ~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~D 216 (257)
T 3tos_A 149 CSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFD 216 (257)
T ss_dssp TTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred hhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEc
Confidence 1234553 6899999998664432 35799999999751 1 234678999999998873
No 320
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.34 E-value=0.0019 Score=51.93 Aligned_cols=93 Identities=3% Similarity=-0.054 Sum_probs=63.4
Q ss_pred cCCCCCeEEEE-ccc-cHHHHHHhcc--CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccC--CCC---CCCCCCccEE
Q psy8015 23 GHSKRLDCLAL-TSN-TKQSTTLPTF--IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADG--RAS---FGDNGPYDAI 93 (165)
Q Consensus 23 ~~~~~~~vLei-~Gs-G~~t~~la~~--~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~--~~~---~~~~~~fD~I 93 (165)
..+++++||=+ +|. |..+..+|+. ..+|+++|.+++-.+.++ ++|.+.+ +..+. .+. ......+|+|
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~--~lGa~~~--i~~~~~~~~~v~~~t~g~g~d~v 243 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAR--EVGADAA--VKSGAGAADAIRELTGGQGATAV 243 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH--HTTCSEE--EECSTTHHHHHHHHHGGGCEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH--HcCCCEE--EcCCCcHHHHHHHHhCCCCCeEE
Confidence 35789999998 544 7888888875 358999999999988875 3455432 22111 000 0112369988
Q ss_pred EEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 94 HVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 94 ~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
|-....+...+...+.|+++|+++..
T Consensus 244 ~d~~G~~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 244 FDFVGAQSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp EESSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred EECCCCHHHHHHHHHHHhcCCEEEEE
Confidence 87666554566778999999998874
No 321
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.29 E-value=0.007 Score=48.68 Aligned_cols=84 Identities=15% Similarity=0.264 Sum_probs=55.5
Q ss_pred CCCCeEEEE-c------cccHHHHHHhccC---CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEE
Q psy8015 25 SKRLDCLAL-T------SNTKQSTTLPTFI---PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIH 94 (165)
Q Consensus 25 ~~~~~vLei-~------GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~ 94 (165)
..+++|||+ + ..|. ..+.+.. +.|+++|+.+-.. ..+ .+++||..+. ...++||+|+
T Consensus 108 p~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s---------da~-~~IqGD~~~~-~~~~k~DLVI 174 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS---------DAD-STLIGDCATV-HTANKWDLII 174 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC---------SSS-EEEESCGGGE-EESSCEEEEE
T ss_pred cCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc---------CCC-eEEEcccccc-ccCCCCCEEE
Confidence 358999999 8 4454 2344333 4899999977321 113 4599997543 2347899999
Q ss_pred EcCCCCC-------------chH----HHHhccccCcEEEEEec
Q psy8015 95 VGAAYPR-------------YPE----IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 95 i~~~~~~-------------~p~----~l~~~LkpgG~lvi~~~ 121 (165)
.+.+... +.+ -..+.|+|||.+++=+-
T Consensus 175 SDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVF 218 (344)
T 3r24_A 175 SDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 218 (344)
T ss_dssp ECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEe
Confidence 9865431 112 24678999999999653
No 322
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.28 E-value=0.0004 Score=55.97 Aligned_cols=94 Identities=6% Similarity=-0.153 Sum_probs=61.8
Q ss_pred cCCCCCeEEEE-cc-ccHHHHHHhccC---CcEEEEeCCHHHHHhcccccCCCCCeE-EEE-ccCCCCCCCCCCccEEEE
Q psy8015 23 GHSKRLDCLAL-TS-NTKQSTTLPTFI---PNSFNINVYYYLSGGPLSSTIDPDHDY-DLI-ADGRASFGDNGPYDAIHV 95 (165)
Q Consensus 23 ~~~~~~~vLei-~G-sG~~t~~la~~~---~~V~aiD~~~~~~~~A~~~~~~~~nV~-~~~-gD~~~~~~~~~~fD~I~i 95 (165)
.. ++++||-+ +| .|..+..+|+.. .+|+++|.+++-.+.++ ++|.+.+- ... .|....+.....||+||-
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~--~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid 244 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFAL--ELGADYVSEMKDAESLINKLTDGLGASIAID 244 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH--HHTCSEEECHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH--HhCCCEEeccccchHHHHHhhcCCCccEEEE
Confidence 45 89999999 64 377778888754 58999999999888775 34543221 000 111111111236999987
Q ss_pred cCCCCCchHHHHhccccCcEEEEE
Q psy8015 96 GAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 96 ~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
....+...+...+.|+++|+++..
T Consensus 245 ~~g~~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 245 LVGTEETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp SSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCChHHHHHHHHHhhcCCEEEEe
Confidence 766554556678999999998874
No 323
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.27 E-value=0.0039 Score=50.54 Aligned_cols=93 Identities=9% Similarity=-0.034 Sum_probs=62.0
Q ss_pred cCCCCCeEEEE-ccc-cHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC------CCCCCCCccEE
Q psy8015 23 GHSKRLDCLAL-TSN-TKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA------SFGDNGPYDAI 93 (165)
Q Consensus 23 ~~~~~~~vLei-~Gs-G~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~------~~~~~~~fD~I 93 (165)
..+++++||-+ +|. |..++.+|+.. .+|+++|.+++-.+.++ ++|.+. ++..+..+ .......+|+|
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~--~lGa~~--vi~~~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAF--ALGADH--GINRLEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--HHTCSE--EEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH--HcCCCE--EEcCCcccHHHHHHHHhCCCCceEE
Confidence 34789999988 543 77777777764 48999999999888774 345432 22221110 00112369998
Q ss_pred EEcCCCCCchHHHHhccccCcEEEEEe
Q psy8015 94 HVGAAYPRYPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 94 ~i~~~~~~~p~~l~~~LkpgG~lvi~~ 120 (165)
+-..+ ....+...+.|+++|+++..-
T Consensus 262 id~~g-~~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 262 LEIAG-GAGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp EEETT-SSCHHHHHHHEEEEEEEEEEC
T ss_pred EECCC-hHHHHHHHHHhhcCCEEEEEe
Confidence 87666 455566779999999988753
No 324
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.26 E-value=0.0018 Score=47.78 Aligned_cols=93 Identities=10% Similarity=-0.058 Sum_probs=55.8
Q ss_pred cCCCCCeEEEE-c--cccHHHHHHhcc-CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCC--CC---CCCCCCccEE
Q psy8015 23 GHSKRLDCLAL-T--SNTKQSTTLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR--AS---FGDNGPYDAI 93 (165)
Q Consensus 23 ~~~~~~~vLei-~--GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~--~~---~~~~~~fD~I 93 (165)
..+++++||.. + |.|..++.+++. ..+|+++|.+++..+.++ ++|.+.+ +-..+.. +. ......+|++
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~--~~g~~~~-~d~~~~~~~~~~~~~~~~~~~D~v 111 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS--RLGVEYV-GDSRSVDFADEILELTDGYGVDVV 111 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH--TTCCSEE-EETTCSTHHHHHHHHTTTCCEEEE
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--HcCCCEE-eeCCcHHHHHHHHHHhCCCCCeEE
Confidence 34788999877 4 334444444443 458999999998887664 2344221 1111110 00 0112369999
Q ss_pred EEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 94 HVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 94 ~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
+.+.+ ....+...+.|+|||+++..
T Consensus 112 i~~~g-~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 112 LNSLA-GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp EECCC-THHHHHHHHTEEEEEEEEEC
T ss_pred EECCc-hHHHHHHHHHhccCCEEEEE
Confidence 87654 34446678999999998874
No 325
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=96.22 E-value=0.0017 Score=51.61 Aligned_cols=87 Identities=11% Similarity=0.017 Sum_probs=56.4
Q ss_pred CCCCCeEEEE-cc-ccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCC
Q psy8015 24 HSKRLDCLAL-TS-NTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYP 100 (165)
Q Consensus 24 ~~~~~~vLei-~G-sG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~ 100 (165)
.+++++||=. +| .|..+..+|+.. .+|++++ +++-.+.++ ++|.+.+ + .| .+.+ ...||++|-..+.+
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~--~lGa~~v--~-~d-~~~v--~~g~Dvv~d~~g~~ 210 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA--KRGVRHL--Y-RE-PSQV--TQKYFAIFDAVNSQ 210 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH--HHTEEEE--E-SS-GGGC--CSCEEEEECC----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH--HcCCCEE--E-cC-HHHh--CCCccEEEECCCch
Confidence 4789999988 53 477777777754 4899999 888777764 3454322 2 24 2333 45799887655544
Q ss_pred CchHHHHhccccCcEEEEEe
Q psy8015 101 RYPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 101 ~~p~~l~~~LkpgG~lvi~~ 120 (165)
.. ....+.|+++|+++..-
T Consensus 211 ~~-~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 211 NA-AALVPSLKANGHIICIQ 229 (315)
T ss_dssp ----TTGGGEEEEEEEEEEC
T ss_pred hH-HHHHHHhcCCCEEEEEe
Confidence 44 55679999999998863
No 326
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.17 E-value=0.0044 Score=49.56 Aligned_cols=94 Identities=6% Similarity=-0.026 Sum_probs=61.7
Q ss_pred cCCCCCeEEEE-c-cccHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeEEEEccCC------CCCCCCCCccE
Q psy8015 23 GHSKRLDCLAL-T-SNTKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR------ASFGDNGPYDA 92 (165)
Q Consensus 23 ~~~~~~~vLei-~-GsG~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~------~~~~~~~~fD~ 92 (165)
...++++||=. + |.|.++..+++..+ .++++|.+++-.+.|+ ++|.+. ++.-+-. ..+.+...+|.
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~--~lGa~~--~i~~~~~~~~~~~~~~~~~~g~d~ 232 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAK--SFGAMQ--TFNSSEMSAPQMQSVLRELRFNQL 232 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH--HTTCSE--EEETTTSCHHHHHHHHGGGCSSEE
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHH--HcCCeE--EEeCCCCCHHHHHHhhcccCCccc
Confidence 34789999988 4 44666777777653 5789999999888775 445432 2221110 01112345888
Q ss_pred EEEcCCCCCchHHHHhccccCcEEEEEe
Q psy8015 93 IHVGAAYPRYPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 93 I~i~~~~~~~p~~l~~~LkpgG~lvi~~ 120 (165)
|+-....+...+...+.|++||++++.-
T Consensus 233 v~d~~G~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 233 ILETAGVPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp EEECSCSHHHHHHHHHHCCTTCEEEECC
T ss_pred ccccccccchhhhhhheecCCeEEEEEe
Confidence 8776665555667789999999988743
No 327
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=96.12 E-value=0.0046 Score=50.05 Aligned_cols=94 Identities=13% Similarity=0.039 Sum_probs=59.8
Q ss_pred CC-CCCeEEEE-c-cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCC
Q psy8015 24 HS-KRLDCLAL-T-SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAY 99 (165)
Q Consensus 24 ~~-~~~~vLei-~-GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~ 99 (165)
.. ++++||=+ + |.|..+..+|+.. .+|++++.+++-.+.++ +++|.+.+- -..|........+.+|++|-....
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~-~~lGa~~vi-~~~~~~~~~~~~~g~D~vid~~g~ 254 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEAL-QDLGADDYV-IGSDQAKMSELADSLDYVIDTVPV 254 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHH-TTSCCSCEE-ETTCHHHHHHSTTTEEEEEECCCS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HHcCCceee-ccccHHHHHHhcCCCCEEEECCCC
Confidence 46 89999988 4 3466667777653 58999999988776653 245654321 111100000001369999876665
Q ss_pred CCchHHHHhccccCcEEEEE
Q psy8015 100 PRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 100 ~~~p~~l~~~LkpgG~lvi~ 119 (165)
+...+...+.|+++|+++..
T Consensus 255 ~~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 255 HHALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp CCCSHHHHTTEEEEEEEEEC
T ss_pred hHHHHHHHHHhccCCEEEEe
Confidence 55556667999999998774
No 328
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.11 E-value=0.0022 Score=52.19 Aligned_cols=92 Identities=10% Similarity=-0.072 Sum_probs=61.7
Q ss_pred cCCCCCeEEEE-cc-ccHHHHHHhccC-C-cEEEEeCCHHHHHhcccccCCCCCeEEEEcc-----CCC---CCCCCCCc
Q psy8015 23 GHSKRLDCLAL-TS-NTKQSTTLPTFI-P-NSFNINVYYYLSGGPLSSTIDPDHDYDLIAD-----GRA---SFGDNGPY 90 (165)
Q Consensus 23 ~~~~~~~vLei-~G-sG~~t~~la~~~-~-~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD-----~~~---~~~~~~~f 90 (165)
..+++++||-+ +| .|..++.+|+.. . +|+++|.+++..+.++ ++|.+.+ +.-+ ..+ ... .+.|
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~--~lGa~~v--i~~~~~~~~~~~~i~~~t-~gg~ 262 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI--ELGATEC--LNPKDYDKPIYEVICEKT-NGGV 262 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH--HTTCSEE--ECGGGCSSCHHHHHHHHT-TSCB
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH--HcCCcEE--EecccccchHHHHHHHHh-CCCC
Confidence 34789999999 54 477778888764 3 7999999999888775 4555422 2111 000 011 1379
Q ss_pred cEEEEcCCCCCchHHHHhccccC-cEEEEE
Q psy8015 91 DAIHVGAAYPRYPEIFIHHLKSG-GRLVIP 119 (165)
Q Consensus 91 D~I~i~~~~~~~p~~l~~~Lkpg-G~lvi~ 119 (165)
|+||-....+...+..++.|+++ |+++..
T Consensus 263 Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 263 DYAVECAGRIETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SEEEECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCHHHHHHHHHHHhcCCCEEEEE
Confidence 99987665544556778999999 998764
No 329
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.09 E-value=0.0023 Score=52.12 Aligned_cols=92 Identities=8% Similarity=-0.051 Sum_probs=62.4
Q ss_pred cCCCCCeEEEE-cc-ccHHHHHHhccC--CcEEEEeCCHHHHHhcccccCCCCCeEEEEccC-CCC-------CCCCCCc
Q psy8015 23 GHSKRLDCLAL-TS-NTKQSTTLPTFI--PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADG-RAS-------FGDNGPY 90 (165)
Q Consensus 23 ~~~~~~~vLei-~G-sG~~t~~la~~~--~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~-~~~-------~~~~~~f 90 (165)
..+++++||=+ +| .|..+..+|+.. .+|+++|.+++..+.|+ ++|.+. ++.-.- ... .. .+.|
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~--~lGa~~--vi~~~~~~~~~~~~i~~~~-~gg~ 264 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK--KFGVNE--FVNPKDHDKPIQEVIVDLT-DGGV 264 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH--TTTCCE--EECGGGCSSCHHHHHHHHT-TSCB
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH--HcCCcE--EEccccCchhHHHHHHHhc-CCCC
Confidence 34789999988 54 477788888764 37999999999888775 445543 121110 000 11 1379
Q ss_pred cEEEEcCCCCCchHHHHhccccC-cEEEEE
Q psy8015 91 DAIHVGAAYPRYPEIFIHHLKSG-GRLVIP 119 (165)
Q Consensus 91 D~I~i~~~~~~~p~~l~~~Lkpg-G~lvi~ 119 (165)
|+||-....+...+...+.|++| |+++..
T Consensus 265 D~vid~~g~~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 265 DYSFECIGNVSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp SEEEECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCHHHHHHHHHHhhccCCEEEEE
Confidence 99987666555566778999997 998874
No 330
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.08 E-value=0.0029 Score=51.47 Aligned_cols=92 Identities=8% Similarity=-0.050 Sum_probs=61.8
Q ss_pred cCCCCCeEEEE-ccc-cHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeEEEEcc-----CCC---CCCCCCCc
Q psy8015 23 GHSKRLDCLAL-TSN-TKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIAD-----GRA---SFGDNGPY 90 (165)
Q Consensus 23 ~~~~~~~vLei-~Gs-G~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD-----~~~---~~~~~~~f 90 (165)
..+++++||-+ +|. |..++.+|+..+ +|+++|.+++..+.++ ++|.+.+ +.-+ ..+ ... .+.+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~--~lGa~~v--i~~~~~~~~~~~~~~~~~-~~g~ 262 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK--EVGATEC--VNPQDYKKPIQEVLTEMS-NGGV 262 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH--HTTCSEE--ECGGGCSSCHHHHHHHHT-TSCB
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH--HhCCceE--ecccccchhHHHHHHHHh-CCCC
Confidence 34789999999 543 778888887653 7999999999888775 3454321 2111 000 011 1379
Q ss_pred cEEEEcCCCCCchHHHHhccccC-cEEEEE
Q psy8015 91 DAIHVGAAYPRYPEIFIHHLKSG-GRLVIP 119 (165)
Q Consensus 91 D~I~i~~~~~~~p~~l~~~Lkpg-G~lvi~ 119 (165)
|+||-....+...+...+.|+++ |+++..
T Consensus 263 D~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 263 DFSFEVIGRLDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp SEEEECSCCHHHHHHHHHHBCTTTCEEEEC
T ss_pred cEEEECCCCHHHHHHHHHHhhcCCcEEEEe
Confidence 99987665544556678999999 998864
No 331
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.05 E-value=0.0015 Score=52.48 Aligned_cols=91 Identities=11% Similarity=-0.010 Sum_probs=61.8
Q ss_pred cCCCCCeEEEE-c-cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC-CCCC-----CCCccEE
Q psy8015 23 GHSKRLDCLAL-T-SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA-SFGD-----NGPYDAI 93 (165)
Q Consensus 23 ~~~~~~~vLei-~-GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~-~~~~-----~~~fD~I 93 (165)
..+++++||-+ + |.|..++.+++.. .+|+++|.+++-.+.++ ++|.+.+ + |..+ .+.+ .+.+|++
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--~lGa~~~--~--d~~~~~~~~~~~~~~~~~d~v 234 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK--ELGADLV--V--NPLKEDAAKFMKEKVGGVHAA 234 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH--HTTCSEE--E--CTTTSCHHHHHHHHHSSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--HCCCCEE--e--cCCCccHHHHHHHHhCCCCEE
Confidence 45789999999 5 4577777777754 58999999999888775 3454321 1 2111 0000 0369998
Q ss_pred EEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 94 HVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 94 ~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
+-....+...+...+.|+++|+++..
T Consensus 235 id~~g~~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 235 VVTAVSKPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp EESSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred EECCCCHHHHHHHHHHhhcCCEEEEe
Confidence 87666545556778999999998764
No 332
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.99 E-value=0.0038 Score=49.19 Aligned_cols=87 Identities=14% Similarity=0.091 Sum_probs=58.5
Q ss_pred CCCCCeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEc----cCCCCCCCCCCccEEEE
Q psy8015 24 HSKRLDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIA----DGRASFGDNGPYDAIHV 95 (165)
Q Consensus 24 ~~~~~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~g----D~~~~~~~~~~fD~I~i 95 (165)
.+++++||-. + |.|..++.+++.. .+|++++.+++..+.++ ++|.+.+ +.- |..+.. ..+|+++-
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--~~ga~~~--~~~~~~~~~~~~~---~~~d~vid 195 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL--ALGAEEA--ATYAEVPERAKAW---GGLDLVLE 195 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH--HTTCSEE--EEGGGHHHHHHHT---TSEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--hcCCCEE--EECCcchhHHHHh---cCceEEEE
Confidence 4789999988 5 3466666777654 48999999998877764 3454322 211 111111 46999887
Q ss_pred cCCCCCchHHHHhccccCcEEEEE
Q psy8015 96 GAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 96 ~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
... ...+...+.|+++|+++..
T Consensus 196 -~g~-~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 196 -VRG-KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp -CSC-TTHHHHHTTEEEEEEEEEC
T ss_pred -CCH-HHHHHHHHhhccCCEEEEE
Confidence 554 4556778999999998863
No 333
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.97 E-value=0.0053 Score=49.26 Aligned_cols=92 Identities=13% Similarity=0.101 Sum_probs=62.3
Q ss_pred cCCCCCeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC------CCCCCCCccE
Q psy8015 23 GHSKRLDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA------SFGDNGPYDA 92 (165)
Q Consensus 23 ~~~~~~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~------~~~~~~~fD~ 92 (165)
..+++++||-. + |.|..++.+++.. .+|++++.+++..+.++ ++|.+.+ +..+..+ .......+|+
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~--~~ga~~~--~d~~~~~~~~~~~~~~~~~~~d~ 238 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK--ALGADET--VNYTHPDWPKEVRRLTGGKGADK 238 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH--HHTCSEE--EETTSTTHHHHHHHHTTTTCEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--hcCCCEE--EcCCcccHHHHHHHHhCCCCceE
Confidence 34689999988 6 5677777777654 58999999999888775 2344321 2111000 0011246999
Q ss_pred EEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 93 IHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 93 I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
++-... ....+...+.|+++|+++..
T Consensus 239 vi~~~g-~~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 239 VVDHTG-ALYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp EEESSC-SSSHHHHHHHEEEEEEEEES
T ss_pred EEECCC-HHHHHHHHHhhccCCEEEEE
Confidence 988777 66667788999999998774
No 334
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.93 E-value=0.0045 Score=50.25 Aligned_cols=69 Identities=14% Similarity=-0.019 Sum_probs=51.1
Q ss_pred CeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCC---CCccEEEEcCCC
Q psy8015 28 LDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDN---GPYDAIHVGAAY 99 (165)
Q Consensus 28 ~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~---~~fD~I~i~~~~ 99 (165)
.+|+|+ ||+|.++.-+.... ..|+++|+++.+++..+.. .++..++.+|..+..... ..+|+++.+..+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N---~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPC 78 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYN---FPHTQLLAKTIEGITLEEFDRLSFDMILMSPPC 78 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHH---CTTSCEECSCGGGCCHHHHHHHCCSEEEECCC-
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHh---ccccccccCCHHHccHhHcCcCCcCEEEEcCCC
Confidence 589999 99999999888765 3699999999999987632 234557788886543211 168999987653
No 335
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.76 E-value=0.014 Score=46.57 Aligned_cols=96 Identities=10% Similarity=-0.081 Sum_probs=60.4
Q ss_pred cCCCCCeEEEE-ccc-cHHHHHHhcc--CCcEEEEeCCHHHHHhcccccCCCCC-eEEEEccCCC---CCCCCCCccEEE
Q psy8015 23 GHSKRLDCLAL-TSN-TKQSTTLPTF--IPNSFNINVYYYLSGGPLSSTIDPDH-DYDLIADGRA---SFGDNGPYDAIH 94 (165)
Q Consensus 23 ~~~~~~~vLei-~Gs-G~~t~~la~~--~~~V~aiD~~~~~~~~A~~~~~~~~n-V~~~~gD~~~---~~~~~~~fD~I~ 94 (165)
..+++++||=+ +|+ |.+++.+++. ..+|+++|.+++-.+.++ ++|.+. +.....|..+ .......+|.++
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~--~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~ 237 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK--KIGADVTINSGDVNPVDEIKKITGGLGVQSAI 237 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH--HTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEE
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh--hcCCeEEEeCCCCCHHHHhhhhcCCCCceEEE
Confidence 34789999988 654 4555555553 468999999999887775 334432 1111122111 111223578787
Q ss_pred EcCCCCCchHHHHhccccCcEEEEEe
Q psy8015 95 VGAAYPRYPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 95 i~~~~~~~p~~l~~~LkpgG~lvi~~ 120 (165)
.+.......+...+.|+++|+++..-
T Consensus 238 ~~~~~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 238 VCAVARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp ECCSCHHHHHHHHHTEEEEEEEEECC
T ss_pred EeccCcchhheeheeecCCceEEEEe
Confidence 76665555566789999999988753
No 336
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.73 E-value=0.0057 Score=53.82 Aligned_cols=94 Identities=12% Similarity=-0.029 Sum_probs=61.3
Q ss_pred CCCeEEEE-ccccHHHHHHhccC--------------CcEEEEeC---CHHHHHhcc-------------cc--------
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTFI--------------PNSFNINV---YYYLSGGPL-------------SS-------- 66 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~~--------------~~V~aiD~---~~~~~~~A~-------------~~-------- 66 (165)
+.-+|+|+ .|+|+....+.+.. -+++++|. +.+-++.|- ++
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45699999 99999886654421 26899998 444443320 00
Q ss_pred --cC----CCCCeEEEEccCCCCCCC-----CCCccEEEEcCCCCCc-h--------HHHHhccccCcEEEEE
Q psy8015 67 --TI----DPDHDYDLIADGRASFGD-----NGPYDAIHVGAAYPRY-P--------EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 67 --~~----~~~nV~~~~gD~~~~~~~-----~~~fD~I~i~~~~~~~-p--------~~l~~~LkpgG~lvi~ 119 (165)
++ |.-.+++..||+.+.++. ...||++|+++-.+.. | ..+.+.++|||++.-.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 210 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTF 210 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEES
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 11 111478899998765443 3689999999866532 2 3578889999987653
No 337
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.69 E-value=0.0032 Score=50.63 Aligned_cols=94 Identities=9% Similarity=-0.009 Sum_probs=60.6
Q ss_pred cCCCCCeEEEE-cc--ccHHHHHHhcc--CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCC-----CCCCCCCCccE
Q psy8015 23 GHSKRLDCLAL-TS--NTKQSTTLPTF--IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR-----ASFGDNGPYDA 92 (165)
Q Consensus 23 ~~~~~~~vLei-~G--sG~~t~~la~~--~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~-----~~~~~~~~fD~ 92 (165)
..+++++||-. +| .|..++.+++. ..+|+++|.+++..+.++ ++|.+.+ +-..|.. ......+.+|+
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~--~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 243 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK--RAGADYV-INASMQDPLAEIRRITESKGVDA 243 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH--HHTCSEE-EETTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH--HhCCCEE-ecCCCccHHHHHHHHhcCCCceE
Confidence 35789999999 65 66667666664 458999999998888774 2343221 1111110 00111147999
Q ss_pred EEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 93 IHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 93 I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
++-+...+...+...+.|+++|+++..
T Consensus 244 vi~~~g~~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 244 VIDLNNSEKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp EEESCCCHHHHTTGGGGEEEEEEEEEC
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEE
Confidence 987766543445667999999998874
No 338
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.67 E-value=0.0036 Score=50.81 Aligned_cols=93 Identities=8% Similarity=-0.033 Sum_probs=61.1
Q ss_pred cCCCCCeEEEE-cc-ccHHHHHHhccC-C-cEEEEeCCHHHHHhcccccCCCCCeEEEE-ccCCCCCC------CCCCcc
Q psy8015 23 GHSKRLDCLAL-TS-NTKQSTTLPTFI-P-NSFNINVYYYLSGGPLSSTIDPDHDYDLI-ADGRASFG------DNGPYD 91 (165)
Q Consensus 23 ~~~~~~~vLei-~G-sG~~t~~la~~~-~-~V~aiD~~~~~~~~A~~~~~~~~nV~~~~-gD~~~~~~------~~~~fD 91 (165)
..+++++||-+ +| .|.++..+|+.. . +|+++|.+++..+.++ ++|.+.+ +. .+..+.+. ..+.+|
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~--~lGa~~v--i~~~~~~~~~~~~v~~~~~~g~D 262 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK--EFGATEC--INPQDFSKPIQEVLIEMTDGGVD 262 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH--HHTCSEE--ECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH--HcCCceE--eccccccccHHHHHHHHhCCCCC
Confidence 34789999999 54 377777788754 3 7999999999888775 3454322 21 11000000 013699
Q ss_pred EEEEcCCCCCchHHHHhccccC-cEEEEE
Q psy8015 92 AIHVGAAYPRYPEIFIHHLKSG-GRLVIP 119 (165)
Q Consensus 92 ~I~i~~~~~~~p~~l~~~Lkpg-G~lvi~ 119 (165)
+||-........+...+.|+++ |+++..
T Consensus 263 ~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 263 YSFECIGNVKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp EEEECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred EEEECCCcHHHHHHHHHhhccCCcEEEEE
Confidence 9987665544556678999999 998864
No 339
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.61 E-value=0.0054 Score=49.88 Aligned_cols=93 Identities=9% Similarity=-0.042 Sum_probs=61.5
Q ss_pred cCCCCCeEEEE-cc-ccHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeEEEEccC-CCCCC------CCCCcc
Q psy8015 23 GHSKRLDCLAL-TS-NTKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIADG-RASFG------DNGPYD 91 (165)
Q Consensus 23 ~~~~~~~vLei-~G-sG~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~-~~~~~------~~~~fD 91 (165)
..+++++||-+ +| .|..++.+|+..+ +|+++|.+++-.+.++ ++|.+.+ +.-+. .+.+. ..+.+|
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~--~lGa~~v--i~~~~~~~~~~~~v~~~~~~g~D 267 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK--ALGATDC--LNPRELDKPVQDVITELTAGGVD 267 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH--HTTCSEE--ECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH--HhCCcEE--EccccccchHHHHHHHHhCCCcc
Confidence 34789999999 54 4777888887653 7999999999888774 4455322 21110 00010 013699
Q ss_pred EEEEcCCCCCchHHHHhccccC-cEEEEE
Q psy8015 92 AIHVGAAYPRYPEIFIHHLKSG-GRLVIP 119 (165)
Q Consensus 92 ~I~i~~~~~~~p~~l~~~Lkpg-G~lvi~ 119 (165)
+||-....+...+..++.|+++ |+++..
T Consensus 268 vvid~~G~~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 268 YSLDCAGTAQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp EEEESSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred EEEECCCCHHHHHHHHHHhhcCCCEEEEE
Confidence 9887665544556778999999 998763
No 340
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.58 E-value=0.013 Score=47.54 Aligned_cols=93 Identities=13% Similarity=0.062 Sum_probs=59.3
Q ss_pred CC-CCCeEEEE-c-cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCC-CCCCCccEEEEcCC
Q psy8015 24 HS-KRLDCLAL-T-SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASF-GDNGPYDAIHVGAA 98 (165)
Q Consensus 24 ~~-~~~~vLei-~-GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~-~~~~~fD~I~i~~~ 98 (165)
.. ++++||=+ + |.|..++.+++.. .+|++++.+++-.+.++ +++|.+. ++..+-.+.. ...+.+|+|+-...
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~lGa~~--v~~~~~~~~~~~~~~~~D~vid~~g 260 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL-KNFGADS--FLVSRDQEQMQAAAGTLDGIIDTVS 260 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH-HTSCCSE--EEETTCHHHHHHTTTCEEEEEECCS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhcCCce--EEeccCHHHHHHhhCCCCEEEECCC
Confidence 45 89999988 4 3466667777654 48999999988776653 2445432 1211100000 00136999988766
Q ss_pred CCCchHHHHhccccCcEEEEE
Q psy8015 99 YPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 99 ~~~~p~~l~~~LkpgG~lvi~ 119 (165)
.....+..++.|+++|+++..
T Consensus 261 ~~~~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 261 AVHPLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp SCCCSHHHHHHEEEEEEEEEC
T ss_pred cHHHHHHHHHHHhcCCEEEEE
Confidence 654456667999999998764
No 341
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.57 E-value=0.0022 Score=51.53 Aligned_cols=92 Identities=10% Similarity=-0.025 Sum_probs=59.4
Q ss_pred cCCCCCeEEEE-cc--ccHHHHHHhcc-CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC------CCCCCCCccE
Q psy8015 23 GHSKRLDCLAL-TS--NTKQSTTLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA------SFGDNGPYDA 92 (165)
Q Consensus 23 ~~~~~~~vLei-~G--sG~~t~~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~------~~~~~~~fD~ 92 (165)
..+++++||-. +| .|..++.+++. ..+|+++|.+++-.+.++ ++|.+. ++..+..+ .......+|+
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--~lga~~--~~~~~~~~~~~~~~~~~~~~g~Dv 216 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL--RLGAAY--VIDTSTAPLYETVMELTNGIGADA 216 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH--HHTCSE--EEETTTSCHHHHHHHHTTTSCEEE
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--hCCCcE--EEeCCcccHHHHHHHHhCCCCCcE
Confidence 34789999988 65 57777777765 358999999998887775 234432 12111100 0111246998
Q ss_pred EEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 93 IHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 93 I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
++-+.+.+...+ ..+.|+++|+++..
T Consensus 217 vid~~g~~~~~~-~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 217 AIDSIGGPDGNE-LAFSLRPNGHFLTI 242 (340)
T ss_dssp EEESSCHHHHHH-HHHTEEEEEEEEEC
T ss_pred EEECCCChhHHH-HHHHhcCCCEEEEE
Confidence 887655544434 45899999998874
No 342
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.55 E-value=0.0038 Score=50.44 Aligned_cols=89 Identities=15% Similarity=0.067 Sum_probs=59.5
Q ss_pred CCCC------CeEEEE-c-cccHHH-HHHh-ccCC-c-EEEEeCCHH---HHHhcccccCCCCCeEEEEccCCC-CCCC-
Q psy8015 24 HSKR------LDCLAL-T-SNTKQS-TTLP-TFIP-N-SFNINVYYY---LSGGPLSSTIDPDHDYDLIADGRA-SFGD- 86 (165)
Q Consensus 24 ~~~~------~~vLei-~-GsG~~t-~~la-~~~~-~-V~aiD~~~~---~~~~A~~~~~~~~nV~~~~gD~~~-~~~~- 86 (165)
.+++ ++||=+ + |.|.++ ..+| +..+ + |+++|.+++ -.+.++ ++|.+.+ |..+ .+.+
T Consensus 164 ~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~--~lGa~~v-----~~~~~~~~~i 236 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE--ELDATYV-----DSRQTPVEDV 236 (357)
T ss_dssp HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH--HTTCEEE-----ETTTSCGGGH
T ss_pred CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH--HcCCccc-----CCCccCHHHH
Confidence 3688 999999 4 347777 8888 7653 4 999999987 777664 4454322 2111 1100
Q ss_pred ---CCCccEEEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 87 ---NGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 87 ---~~~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
.+.||+||-....+...+..++.|+++|+++..
T Consensus 237 ~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 237 PDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp HHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred HHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEE
Confidence 136999887655544456678999999998874
No 343
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.47 E-value=0.0063 Score=48.58 Aligned_cols=92 Identities=14% Similarity=-0.030 Sum_probs=57.9
Q ss_pred cCCCCCeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC------CCCCCCCccE
Q psy8015 23 GHSKRLDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA------SFGDNGPYDA 92 (165)
Q Consensus 23 ~~~~~~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~------~~~~~~~fD~ 92 (165)
..+++++||-. + |.|..++.+++.. .+|++++.+++-.+.++ ++|.+. ++..+..+ .......+|+
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--~~ga~~--~~~~~~~~~~~~~~~~~~~~g~D~ 220 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK--EYGAEY--LINASKEDILRQVLKFTNGKGVDA 220 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--HTTCSE--EEETTTSCHHHHHHHHTTTSCEEE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HcCCcE--EEeCCCchHHHHHHHHhCCCCceE
Confidence 34789999877 3 3345555555543 58999999999888774 345332 12211110 0111246999
Q ss_pred EEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 93 IHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 93 I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
++-+... ...+...+.|++||+++..
T Consensus 221 vid~~g~-~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 221 SFDSVGK-DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp EEECCGG-GGHHHHHHHEEEEEEEEEC
T ss_pred EEECCCh-HHHHHHHHHhccCCEEEEE
Confidence 8876654 4556678999999998874
No 344
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.42 E-value=0.024 Score=45.43 Aligned_cols=91 Identities=8% Similarity=-0.144 Sum_probs=60.4
Q ss_pred cCCCCCeEEEE-c--cccHHHHHHhcc-CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCC--CCC----CC--CCCc
Q psy8015 23 GHSKRLDCLAL-T--SNTKQSTTLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR--ASF----GD--NGPY 90 (165)
Q Consensus 23 ~~~~~~~vLei-~--GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~--~~~----~~--~~~f 90 (165)
..+++++||-. + |.|..++.+++. ..+|+++|.+++..+.++ ++|.+. ++ |.. +.+ .. .+.+
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~--~~g~~~--~~--d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR--SIGGEV--FI--DFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH--HTTCCE--EE--ETTTCSCHHHHHHHHHTSCE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH--HcCCce--EE--ecCccHhHHHHHHHHhCCCC
Confidence 34789999999 6 467777777664 358999999988777664 234431 12 211 010 00 1269
Q ss_pred cEEEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 91 DAIHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 91 D~I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
|+++-+.+.....+...+.|+++|+++..
T Consensus 240 D~vi~~~g~~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 240 HGVINVSVSEAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp EEEEECSSCHHHHHHHTTSEEEEEEEEEC
T ss_pred CEEEECCCcHHHHHHHHHHHhcCCEEEEE
Confidence 99988776545566778999999998764
No 345
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.34 E-value=0.021 Score=45.47 Aligned_cols=92 Identities=10% Similarity=-0.050 Sum_probs=57.6
Q ss_pred cCCCCCeEEEE-c--cccHHHHHHhcc-CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC------CCCCCCCccE
Q psy8015 23 GHSKRLDCLAL-T--SNTKQSTTLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA------SFGDNGPYDA 92 (165)
Q Consensus 23 ~~~~~~~vLei-~--GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~------~~~~~~~fD~ 92 (165)
..+++++||-. + |.|..++.+++. ..+|+++|.+++..+.++ ++|.+. .+-..|..+ ... .+.+|+
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~--~~g~~~-~~d~~~~~~~~~~~~~~~-~~~~d~ 217 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK--QIGFDA-AFNYKTVNSLEEALKKAS-PDGYDC 217 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--HTTCSE-EEETTSCSCHHHHHHHHC-TTCEEE
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--hcCCcE-EEecCCHHHHHHHHHHHh-CCCCeE
Confidence 34789999988 6 455556555554 358999999998888773 334321 111111000 001 146999
Q ss_pred EEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 93 IHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 93 I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
++-+.+.+ ..+...+.|++||+++..
T Consensus 218 vi~~~g~~-~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 218 YFDNVGGE-FLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp EEESSCHH-HHHHHHTTEEEEEEEEEC
T ss_pred EEECCChH-HHHHHHHHHhcCCEEEEE
Confidence 88776643 345667999999998774
No 346
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.30 E-value=0.012 Score=47.20 Aligned_cols=91 Identities=12% Similarity=0.012 Sum_probs=57.3
Q ss_pred CCCCCeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEcc--CCC---CCCCCCCccEEE
Q psy8015 24 HSKRLDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIAD--GRA---SFGDNGPYDAIH 94 (165)
Q Consensus 24 ~~~~~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD--~~~---~~~~~~~fD~I~ 94 (165)
.+++++||-. + |.|..++.+++.. .+|++++.+++-.+.++ ++|.+.+ +..+ ..+ .......+|++|
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--~~ga~~v--~~~~~~~~~~v~~~~~~~g~Dvvi 232 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK--SVGADIV--LPLEEGWAKAVREATGGAGVDMVV 232 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH--HHTCSEE--EESSTTHHHHHHHHTTTSCEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--hcCCcEE--ecCchhHHHHHHHHhCCCCceEEE
Confidence 4689999876 4 3456666666654 48999999998887775 2344322 2211 100 011123699988
Q ss_pred EcCCCCCchHHHHhccccCcEEEEE
Q psy8015 95 VGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 95 i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
-+.+.+ ..+...+.|+++|+++..
T Consensus 233 d~~g~~-~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 233 DPIGGP-AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp ESCC---CHHHHHHTEEEEEEEEEC
T ss_pred ECCchh-HHHHHHHhhcCCCEEEEE
Confidence 766554 455677999999998874
No 347
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.29 E-value=0.0041 Score=50.52 Aligned_cols=91 Identities=8% Similarity=-0.045 Sum_probs=58.3
Q ss_pred CCCeEEEEc---cccHHHHHHhcc--CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCC---CCCCCCCCccEEEEcC
Q psy8015 26 KRLDCLALT---SNTKQSTTLPTF--IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR---ASFGDNGPYDAIHVGA 97 (165)
Q Consensus 26 ~~~~vLei~---GsG~~t~~la~~--~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~---~~~~~~~~fD~I~i~~ 97 (165)
++++||=.. +.|..+..+|+. ..+|+++|.+++-.+.++ ++|.+.+--...|.. ... ..+.+|+++-..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~--~lGad~vi~~~~~~~~~v~~~-~~~g~Dvvid~~ 247 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK--SLGAHHVIDHSKPLAAEVAAL-GLGAPAFVFSTT 247 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH--HTTCSEEECTTSCHHHHHHTT-CSCCEEEEEECS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH--HcCCCEEEeCCCCHHHHHHHh-cCCCceEEEECC
Confidence 678888662 335666777774 458999999998888774 345432210001110 011 234799887765
Q ss_pred CCCCchHHHHhccccCcEEEEE
Q psy8015 98 AYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 98 ~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
..+...+...+.|+++|+++..
T Consensus 248 g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 248 HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp CHHHHHHHHHHHSCTTCEEEEC
T ss_pred CchhhHHHHHHHhcCCCEEEEE
Confidence 5444556778999999999875
No 348
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.28 E-value=0.032 Score=45.02 Aligned_cols=68 Identities=10% Similarity=-0.108 Sum_probs=47.8
Q ss_pred CCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCC-CCCCccEEEEcCCC
Q psy8015 27 RLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFG-DNGPYDAIHVGAAY 99 (165)
Q Consensus 27 ~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~-~~~~fD~I~i~~~~ 99 (165)
+.+++|+ ||+|.++.-+.... ..|+++|+++..++..+...-.. . .+|..+... ....+|+++.+..+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~---~--~~Di~~~~~~~~~~~D~l~~gpPC 81 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK---P--EGDITQVNEKTIPDHDILCAGFPC 81 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC---C--BSCGGGSCGGGSCCCSEEEEECCC
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC---C--cCCHHHcCHhhCCCCCEEEECCCC
Confidence 5789999 99999998887765 56899999999998775221111 1 577654322 12469999887544
No 349
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.26 E-value=0.0069 Score=48.23 Aligned_cols=93 Identities=5% Similarity=-0.151 Sum_probs=57.4
Q ss_pred cCCCCCeEEEEccc---cHHHHHHhcc-CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC------CCCCCCCccE
Q psy8015 23 GHSKRLDCLALTSN---TKQSTTLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA------SFGDNGPYDA 92 (165)
Q Consensus 23 ~~~~~~~vLei~Gs---G~~t~~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~------~~~~~~~fD~ 92 (165)
..+++++||-..|+ |..++.+++. ..+|++++.+++-.+.++ ++|.+. ++..+..+ .......+|+
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--~~Ga~~--~~~~~~~~~~~~~~~~~~~~g~Dv 212 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK--ALGAWE--TIDYSHEDVAKRVLELTDGKKCPV 212 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH--HHTCSE--EEETTTSCHHHHHHHHTTTCCEEE
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HcCCCE--EEeCCCccHHHHHHHHhCCCCceE
Confidence 34689999865224 4445555553 358999999999888775 234322 12111110 0111246998
Q ss_pred EEEcCCCCCchHHHHhccccCcEEEEEe
Q psy8015 93 IHVGAAYPRYPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 93 I~i~~~~~~~p~~l~~~LkpgG~lvi~~ 120 (165)
++-+... ...+...+.|++||+++..-
T Consensus 213 vid~~g~-~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 213 VYDGVGQ-DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEESSCG-GGHHHHHTTEEEEEEEEECC
T ss_pred EEECCCh-HHHHHHHHHhcCCCEEEEEe
Confidence 8876554 45566789999999988753
No 350
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.21 E-value=0.015 Score=46.73 Aligned_cols=96 Identities=14% Similarity=0.063 Sum_probs=58.2
Q ss_pred CCCeEEEE-ccccHHHHHHhc----cC--C--cEEEEeCCHH---------HHHhcc-----cccCCCC--CeEEEEccC
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPT----FI--P--NSFNINVYYY---------LSGGPL-----SSTIDPD--HDYDLIADG 80 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~----~~--~--~V~aiD~~~~---------~~~~A~-----~~~~~~~--nV~~~~gD~ 80 (165)
+.-+|||+ -|||+.+..... .. . +.+++|.++- ..+..+ .....-. ..++..||+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 44689999 999997643221 11 2 4677876321 111111 1111112 357788998
Q ss_pred CCCCCC--CCCccEEEEcCCCC-Cch--------HHHHhccccCcEEEEEec
Q psy8015 81 RASFGD--NGPYDAIHVGAAYP-RYP--------EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 81 ~~~~~~--~~~fD~I~i~~~~~-~~p--------~~l~~~LkpgG~lvi~~~ 121 (165)
.+.++. ...||++|.++-.| .-| ..+.+.++|||+++-.+.
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYta 227 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSS 227 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCC
T ss_pred HHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeC
Confidence 765443 24799999998544 334 367899999999987553
No 351
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.15 E-value=0.019 Score=46.03 Aligned_cols=90 Identities=9% Similarity=-0.015 Sum_probs=59.0
Q ss_pred CCCeEEEE-cc-ccHHHHHHhccC-C-cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC------CCCCCCCccEEEE
Q psy8015 26 KRLDCLAL-TS-NTKQSTTLPTFI-P-NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA------SFGDNGPYDAIHV 95 (165)
Q Consensus 26 ~~~~vLei-~G-sG~~t~~la~~~-~-~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~------~~~~~~~fD~I~i 95 (165)
++++||-+ +| .|..++.+++.. . +|+++|.+++-.+.++ ++|.+.+ +..+..+ .......+|++|-
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~--~~Ga~~~--~~~~~~~~~~~v~~~~~g~g~D~vid 242 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK--KVGADYV--INPFEEDVVKEVMDITDGNGVDVFLE 242 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH--HHTCSEE--ECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH--HhCCCEE--ECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 88999999 53 467777777754 3 8999999999888775 3343321 1111000 0111236999987
Q ss_pred cCCCCCchHHHHhccccCcEEEEE
Q psy8015 96 GAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 96 ~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
....+...+...+.|+++|+++..
T Consensus 243 ~~g~~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 243 FSGAPKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp CSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEE
Confidence 666544556678999999998774
No 352
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.13 E-value=0.025 Score=46.89 Aligned_cols=56 Identities=7% Similarity=-0.214 Sum_probs=44.8
Q ss_pred CCCCeEEEE-ccccHHHHHHh-ccC---CcEEEEeCCHHHHHhcc--ccc---CCC-CCeEEEEccC
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLP-TFI---PNSFNINVYYYLSGGPL--SST---IDP-DHDYDLIADG 80 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la-~~~---~~V~aiD~~~~~~~~A~--~~~---~~~-~nV~~~~gD~ 80 (165)
.+++.|+|| +..|+.|..++ +.. ++|+++|.+|+..+..+ ++. .+. +||+++..-+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 689999999 99999999888 554 58999999999999875 333 235 6888876544
No 353
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.13 E-value=0.0059 Score=48.77 Aligned_cols=93 Identities=6% Similarity=-0.099 Sum_probs=58.4
Q ss_pred cCCCCCeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCC--C---CCCCCCCccEE
Q psy8015 23 GHSKRLDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR--A---SFGDNGPYDAI 93 (165)
Q Consensus 23 ~~~~~~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~--~---~~~~~~~fD~I 93 (165)
..+++++||-. + |.|..++.+++.. .+|++++.+++-.+.+. +++|.+.+ +-..+.. + ... .+.+|++
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~~~~-~~~~d~v 222 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLV-EELGFDGA-IDYKNEDLAAGLKREC-PKGIDVF 222 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCCSEE-EETTTSCHHHHHHHHC-TTCEEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHcCCCEE-EECCCHHHHHHHHHhc-CCCceEE
Confidence 45789999977 5 4466666666654 48999999998877662 23344321 1111110 0 001 2469988
Q ss_pred EEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 94 HVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 94 ~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
+-+.+. ...+...+.|+++|+++..
T Consensus 223 i~~~g~-~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 223 FDNVGG-EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp EESSCH-HHHHHHHTTEEEEEEEEEC
T ss_pred EECCCc-chHHHHHHHHhhCCEEEEE
Confidence 876553 3445677999999998874
No 354
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=94.97 E-value=0.032 Score=44.22 Aligned_cols=92 Identities=4% Similarity=-0.126 Sum_probs=55.9
Q ss_pred CCCCC-eEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCe-EEEEcc--CCCCCCCCCCccEEEE
Q psy8015 24 HSKRL-DCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHD-YDLIAD--GRASFGDNGPYDAIHV 95 (165)
Q Consensus 24 ~~~~~-~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV-~~~~gD--~~~~~~~~~~fD~I~i 95 (165)
.++++ +||-. + |.|..+..+++.. .+|++++.+++-.+.++ ++|.+.+ .....+ ...... .+.+|++|-
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~--~lGa~~~i~~~~~~~~~~~~~~-~~~~d~vid 222 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR--VLGAKEVLAREDVMAERIRPLD-KQRWAAAVD 222 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH--HTTCSEEEECC---------CC-SCCEEEEEE
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--HcCCcEEEecCCcHHHHHHHhc-CCcccEEEE
Confidence 46675 88877 5 4456666666654 48999999988777764 3454322 111111 001111 246998887
Q ss_pred cCCCCCchHHHHhccccCcEEEEE
Q psy8015 96 GAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 96 ~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
....+ ..+...+.|+++|+++..
T Consensus 223 ~~g~~-~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 223 PVGGR-TLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp CSTTT-THHHHHHTEEEEEEEEEC
T ss_pred CCcHH-HHHHHHHhhccCCEEEEE
Confidence 65553 455677999999998763
No 355
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.93 E-value=0.019 Score=45.50 Aligned_cols=86 Identities=5% Similarity=-0.067 Sum_probs=52.9
Q ss_pred eEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCC--CCCCCCCCccEEEEcCCCCCc
Q psy8015 29 DCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR--ASFGDNGPYDAIHVGAAYPRY 102 (165)
Q Consensus 29 ~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~--~~~~~~~~fD~I~i~~~~~~~ 102 (165)
+||=. + |.|..+..+|+.. .+|++++.+++-.+.++ ++|.+.+ +-..+.. ..+. .+.+|++|-..+.+ .
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~--~lGa~~v-i~~~~~~~~~~~~-~~~~d~v~d~~g~~-~ 223 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK--SLGANRI-LSRDEFAESRPLE-KQLWAGAIDTVGDK-V 223 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH--HHTCSEE-EEGGGSSCCCSSC-CCCEEEEEESSCHH-H
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--hcCCCEE-EecCCHHHHHhhc-CCCccEEEECCCcH-H
Confidence 47755 3 3456666666654 49999999998888775 3454321 1111111 1111 24799877654433 4
Q ss_pred hHHHHhccccCcEEEEE
Q psy8015 103 PEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 103 p~~l~~~LkpgG~lvi~ 119 (165)
.+..++.|+++|+++..
T Consensus 224 ~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 224 LAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp HHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHHhcCCEEEEE
Confidence 56678999999998874
No 356
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.83 E-value=0.039 Score=44.02 Aligned_cols=93 Identities=5% Similarity=-0.068 Sum_probs=58.4
Q ss_pred cCCCCCeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCC------CCCCccE
Q psy8015 23 GHSKRLDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFG------DNGPYDA 92 (165)
Q Consensus 23 ~~~~~~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~------~~~~fD~ 92 (165)
..+++++||-. + |.|..++.+++.. .+|++++.+++..+.++ +++|.+.+ +-..+. ..+. ..+.+|+
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-~~~g~~~~-~d~~~~-~~~~~~~~~~~~~~~d~ 228 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLK-TKFGFDDA-FNYKEE-SDLTAALKRCFPNGIDI 228 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTSCCSEE-EETTSC-SCSHHHHHHHCTTCEEE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHcCCceE-EecCCH-HHHHHHHHHHhCCCCcE
Confidence 34789999988 5 4566666666543 58999999998887664 13454321 111110 0110 0146999
Q ss_pred EEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 93 IHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 93 I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
++-+.+. ...+...+.|++||+++..
T Consensus 229 vi~~~g~-~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 229 YFENVGG-KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp EEESSCH-HHHHHHHTTEEEEEEEEEC
T ss_pred EEECCCH-HHHHHHHHHHhcCCEEEEE
Confidence 9877654 3445677999999998874
No 357
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=94.73 E-value=0.033 Score=44.58 Aligned_cols=91 Identities=9% Similarity=-0.091 Sum_probs=58.6
Q ss_pred cCCCCCeEEEE-cc-ccHHHHHHhccC-C-cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC---CCC--CCCCccEE
Q psy8015 23 GHSKRLDCLAL-TS-NTKQSTTLPTFI-P-NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA---SFG--DNGPYDAI 93 (165)
Q Consensus 23 ~~~~~~~vLei-~G-sG~~t~~la~~~-~-~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~---~~~--~~~~fD~I 93 (165)
.. ++++||-+ +| .|..+..+|+.. . +|+++|.+++-.+.++ ++ .+. ++..+..+ ... ....+|++
T Consensus 162 ~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~--~l-a~~--v~~~~~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 162 GV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR--PY-ADR--LVNPLEEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp CC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT--TT-CSE--EECTTTSCHHHHHHHHHSSCEEEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH--Hh-HHh--ccCcCccCHHHHHHHhcCCCCCEE
Confidence 44 89999999 53 467777777764 3 8999999998888774 22 221 12111000 000 02369999
Q ss_pred EEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 94 HVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 94 ~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
+-....+...+...+.|+++|+++..
T Consensus 236 id~~g~~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 236 LEFSGNEAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp EECSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred EECCCCHHHHHHHHHHHhcCCEEEEE
Confidence 87665544456678999999998764
No 358
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.70 E-value=0.066 Score=37.23 Aligned_cols=89 Identities=3% Similarity=-0.186 Sum_probs=58.6
Q ss_pred CeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--CC--CCCCccEEEEcCCC
Q psy8015 28 LDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--FG--DNGPYDAIHVGAAY 99 (165)
Q Consensus 28 ~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~~--~~~~fD~I~i~~~~ 99 (165)
++|+= +|.|.++..+++. ..+|+.+|.+++.++.++. .++.++.+|+.+. +. ....+|.+++....
T Consensus 8 ~~viI-iG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-----~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 8 NHALL-VGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-----RGVRAVLGNAANEEIMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp SCEEE-ECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-----TTCEEEESCTTSHHHHHHTTGGGCSEEEECCSC
T ss_pred CCEEE-ECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-----cCCCEEECCCCCHHHHHhcCcccCCEEEEECCC
Confidence 44533 6888888777764 3589999999999887642 2467889998642 11 12468999886544
Q ss_pred CCch---HHHHhccccCcEEEEEecC
Q psy8015 100 PRYP---EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 100 ~~~p---~~l~~~LkpgG~lvi~~~~ 122 (165)
...- -...+.+.|+.++++-...
T Consensus 82 ~~~n~~~~~~a~~~~~~~~iiar~~~ 107 (140)
T 3fwz_A 82 GYEAGEIVASARAKNPDIEIIARAHY 107 (140)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEEESS
T ss_pred hHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 3211 1345677888887776553
No 359
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.64 E-value=0.029 Score=45.37 Aligned_cols=85 Identities=15% Similarity=-0.068 Sum_probs=56.4
Q ss_pred CCeEEEE-c-cccHHHHHHhccC-CcEEEEeCCH---HHHHhcccccCCCCCeEEEEccCCCCCCC-----CCCccEEEE
Q psy8015 27 RLDCLAL-T-SNTKQSTTLPTFI-PNSFNINVYY---YLSGGPLSSTIDPDHDYDLIADGRASFGD-----NGPYDAIHV 95 (165)
Q Consensus 27 ~~~vLei-~-GsG~~t~~la~~~-~~V~aiD~~~---~~~~~A~~~~~~~~nV~~~~gD~~~~~~~-----~~~fD~I~i 95 (165)
+++||-+ + |.|..++.+++.. .+|+++|.++ +-.+.++ ++|.+.+ | .+.+.+ .+.+|++|-
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~--~~ga~~v-----~-~~~~~~~~~~~~~~~d~vid 252 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIE--ETKTNYY-----N-SSNGYDKLKDSVGKFDVIID 252 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHH--HHTCEEE-----E-CTTCSHHHHHHHCCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHH--HhCCcee-----c-hHHHHHHHHHhCCCCCEEEE
Confidence 9999988 4 3355566666543 4899999997 6666664 3344322 2 111111 146999988
Q ss_pred cCCCCCch-HHHHhccccCcEEEEE
Q psy8015 96 GAAYPRYP-EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 96 ~~~~~~~p-~~l~~~LkpgG~lvi~ 119 (165)
..+.+... +...+.|+++|+++..
T Consensus 253 ~~g~~~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 253 ATGADVNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp CCCCCTHHHHHHGGGEEEEEEEEEC
T ss_pred CCCChHHHHHHHHHHHhcCCEEEEE
Confidence 77766566 7788999999998774
No 360
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.52 E-value=0.014 Score=47.97 Aligned_cols=92 Identities=5% Similarity=-0.082 Sum_probs=58.6
Q ss_pred CCCCCeEEEE-cc-ccHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC------CCCCCCCccEE
Q psy8015 24 HSKRLDCLAL-TS-NTKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA------SFGDNGPYDAI 93 (165)
Q Consensus 24 ~~~~~~vLei-~G-sG~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~------~~~~~~~fD~I 93 (165)
.+++++||=+ +| .|..+..+|+..+ +|+++|.+++-.+.++ ++|.+. ++..+..+ .......+|+|
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~--~lGa~~--vi~~~~~~~~~~i~~~t~g~g~D~v 286 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAK--ELGADH--VIDPTKENFVEAVLDYTNGLGAKLF 286 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH--HHTCSE--EECTTTSCHHHHHHHHTTTCCCSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH--HcCCCE--EEcCCCCCHHHHHHHHhCCCCCCEE
Confidence 4789999988 43 3677777777653 7999999999988885 334332 12111100 01122369998
Q ss_pred EEcCCCC-CchHHHHhcc----ccCcEEEEE
Q psy8015 94 HVGAAYP-RYPEIFIHHL----KSGGRLVIP 119 (165)
Q Consensus 94 ~i~~~~~-~~p~~l~~~L----kpgG~lvi~ 119 (165)
|-..+.+ ...+.+.+.| +++|+++..
T Consensus 287 id~~g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 287 LEATGVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp EECSSCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred EECCCCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 8765554 2344555666 999998874
No 361
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.50 E-value=0.0054 Score=49.33 Aligned_cols=90 Identities=10% Similarity=-0.020 Sum_probs=56.3
Q ss_pred CCCeEEEEcccc---HHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEcc--CCC---CCCCCCCccEEEEc
Q psy8015 26 KRLDCLALTSNT---KQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIAD--GRA---SFGDNGPYDAIHVG 96 (165)
Q Consensus 26 ~~~~vLei~GsG---~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD--~~~---~~~~~~~fD~I~i~ 96 (165)
++++||=..|+| ..++.+++.. .+|++++.+++-.+.++ ++|.+.+ +..+ ..+ .. ....||+|+-.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~--~lGa~~v--i~~~~~~~~~~~~~-~~~g~Dvv~d~ 224 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK--KMGADIV--LNHKESLLNQFKTQ-GIELVDYVFCT 224 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH--HHTCSEE--ECTTSCHHHHHHHH-TCCCEEEEEES
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--hcCCcEE--EECCccHHHHHHHh-CCCCccEEEEC
Confidence 789998654454 4455555543 48999999998888775 2344321 1111 000 01 12469988876
Q ss_pred CCCCCchHHHHhccccCcEEEEEe
Q psy8015 97 AAYPRYPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 97 ~~~~~~p~~l~~~LkpgG~lvi~~ 120 (165)
...+...+...+.|+++|+++...
T Consensus 225 ~g~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 225 FNTDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEESS
T ss_pred CCchHHHHHHHHHhccCCEEEEEC
Confidence 554444566789999999997643
No 362
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=94.42 E-value=0.016 Score=46.98 Aligned_cols=91 Identities=11% Similarity=-0.054 Sum_probs=52.8
Q ss_pred CCCCCeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCC---CCCCCCCCccEEEEc
Q psy8015 24 HSKRLDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR---ASFGDNGPYDAIHVG 96 (165)
Q Consensus 24 ~~~~~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~---~~~~~~~~fD~I~i~ 96 (165)
.+++++||=. + |.|..+..+++.. .+|++++ +++-.+.+ +++|.+.+ +.-+.. +.......+|++|-.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~--~~lGa~~v--~~~~~~~~~~~~~~~~g~D~vid~ 255 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV--RKLGADDV--IDYKSGSVEEQLKSLKPFDFILDN 255 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH--HHTTCSEE--EETTSSCHHHHHHTSCCBSEEEES
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH--HHcCCCEE--EECCchHHHHHHhhcCCCCEEEEC
Confidence 4688999877 2 2345555556544 4899998 66655555 34554321 211110 111112469998876
Q ss_pred CCCC-CchHHHHhccccCcEEEEE
Q psy8015 97 AAYP-RYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 97 ~~~~-~~p~~l~~~LkpgG~lvi~ 119 (165)
.+.+ ..-+...+.|++||+++..
T Consensus 256 ~g~~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 256 VGGSTETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp SCTTHHHHGGGGBCSSSCCEEEES
T ss_pred CCChhhhhHHHHHhhcCCcEEEEe
Confidence 5544 1224556889999998774
No 363
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.41 E-value=0.016 Score=46.13 Aligned_cols=92 Identities=5% Similarity=-0.120 Sum_probs=57.0
Q ss_pred cCCCCCeEEEE-c--cccHHHHHHhcc-CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC---C---CCCCCCccE
Q psy8015 23 GHSKRLDCLAL-T--SNTKQSTTLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA---S---FGDNGPYDA 92 (165)
Q Consensus 23 ~~~~~~~vLei-~--GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~---~---~~~~~~fD~ 92 (165)
..+++++||-. + |.|..++.+++. ..+|+++|.+++..+.++ ++|.+. .+..+..+ . ......+|+
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~--~~g~~~--~~d~~~~~~~~~i~~~~~~~~~d~ 217 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR--KLGCHH--TINYSTQDFAEVVREITGGKGVDV 217 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH--HHTCSE--EEETTTSCHHHHHHHHHTTCCEEE
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HcCCCE--EEECCCHHHHHHHHHHhCCCCCeE
Confidence 34688999876 4 345555555554 358999999998877764 234321 11111000 0 001236999
Q ss_pred EEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 93 IHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 93 I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
++-+.+. ...+...+.|+++|+++..
T Consensus 218 vi~~~g~-~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 218 VYDSIGK-DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp EEECSCT-TTHHHHHHTEEEEEEEEEC
T ss_pred EEECCcH-HHHHHHHHhhccCCEEEEE
Confidence 9877665 5556778999999998774
No 364
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=94.36 E-value=0.034 Score=55.78 Aligned_cols=92 Identities=13% Similarity=0.101 Sum_probs=47.7
Q ss_pred CCCCeEEEE-ccccHHHHHHhccC-------CcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCC--CCCCCCCccE
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFI-------PNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRA--SFGDNGPYDA 92 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~-------~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~--~~~~~~~fD~ 92 (165)
.|..+|||| .|+|..+..+.... .+.+-.|+++...+.|+ ++.+ +++...-|... +. ....||+
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---di~~~~~d~~~~~~~-~~~~ydl 1314 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---HVTQGQWDPANPAPG-SLGKADL 1314 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---TEEEECCCSSCCCC------CCE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---ccccccccccccccC-CCCceeE
Confidence 357899999 99997765443321 25677899998888775 3332 22221112211 11 2356999
Q ss_pred EEEcCCCCC---c---hHHHHhccccCcEEEEEe
Q psy8015 93 IHVGAAYPR---Y---PEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 93 I~i~~~~~~---~---p~~l~~~LkpgG~lvi~~ 120 (165)
|+.....+. + ...+.+.|||||+|++..
T Consensus 1315 via~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1315 LVCNCALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp EEEECC--------------------CCEEEEEE
T ss_pred EEEcccccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 998876652 2 245678999999998854
No 365
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.18 E-value=0.097 Score=42.07 Aligned_cols=91 Identities=11% Similarity=-0.047 Sum_probs=55.2
Q ss_pred CCCCCeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC------CCCCCCCccEE
Q psy8015 24 HSKRLDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA------SFGDNGPYDAI 93 (165)
Q Consensus 24 ~~~~~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~------~~~~~~~fD~I 93 (165)
.+++++||-. + |.|..++.+++.. .+|+++|.+++..+.++ ++|.+. .+..+..+ .......+|++
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~v 235 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE--KLGAAA--GFNYKKEDFSEATLKFTKGAGVNLI 235 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--HHTCSE--EEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--HcCCcE--EEecCChHHHHHHHHHhcCCCceEE
Confidence 4688999866 3 2334444444433 58999999998888774 234321 11111100 00112369999
Q ss_pred EEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 94 HVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 94 ~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
+-+.+.+ ..+...+.|+++|+++..
T Consensus 236 i~~~G~~-~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 236 LDCIGGS-YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp EESSCGG-GHHHHHHHEEEEEEEEEC
T ss_pred EECCCch-HHHHHHHhccCCCEEEEE
Confidence 8776654 445667999999998874
No 366
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.14 E-value=0.01 Score=47.21 Aligned_cols=93 Identities=6% Similarity=-0.136 Sum_probs=55.9
Q ss_pred cCCCCCeEEEEccccHHH---HHHhcc-CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCC--C---CCCCCCCccEE
Q psy8015 23 GHSKRLDCLALTSNTKQS---TTLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR--A---SFGDNGPYDAI 93 (165)
Q Consensus 23 ~~~~~~~vLei~GsG~~t---~~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~--~---~~~~~~~fD~I 93 (165)
..+++++||-.-|+|.++ +.+++. ..+|+++|.+++..+.++ ++|.+. .+-..|.. + .......+|++
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~--~~g~~~-~~~~~~~~~~~~~~~~~~~~~~D~v 213 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL--KAGAWQ-VINYREEDLVERLKEITGGKKVRVV 213 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH--HHTCSE-EEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--HcCCCE-EEECCCccHHHHHHHHhCCCCceEE
Confidence 346889998662244444 444432 358999999998887774 234321 11111110 0 00112369999
Q ss_pred EEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 94 HVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 94 ~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
+-+.+ ....+...+.|+++|+++..
T Consensus 214 i~~~g-~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 214 YDSVG-RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp EECSC-GGGHHHHHHTEEEEEEEEEC
T ss_pred EECCc-hHHHHHHHHHhcCCCEEEEE
Confidence 88776 55556778999999998874
No 367
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.88 E-value=0.021 Score=46.19 Aligned_cols=92 Identities=12% Similarity=0.034 Sum_probs=57.6
Q ss_pred cCCCCCeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC---CCC--CCCCccEE
Q psy8015 23 GHSKRLDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA---SFG--DNGPYDAI 93 (165)
Q Consensus 23 ~~~~~~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~---~~~--~~~~fD~I 93 (165)
..+++++||-. + |.|..++.+++.. .+|++++.+++..+.++ ++|.+. ++..+..+ ... ....+|++
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~--~~Ga~~--~~~~~~~~~~~~~~~~~~~g~D~v 235 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK--SLGCDR--PINYKTEPVGTVLKQEYPEGVDVV 235 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH--HTTCSE--EEETTTSCHHHHHHHHCTTCEEEE
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH--HcCCcE--EEecCChhHHHHHHHhcCCCCCEE
Confidence 45789999877 2 3455566666544 48999999998887775 345432 12211100 000 12469998
Q ss_pred EEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 94 HVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 94 ~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
+-+.+. ...+...+.|+++|+++..
T Consensus 236 id~~g~-~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 236 YESVGG-AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp EECSCT-HHHHHHHHHEEEEEEEEEC
T ss_pred EECCCH-HHHHHHHHHHhcCCEEEEE
Confidence 876554 3445678999999998874
No 368
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.76 E-value=0.014 Score=47.09 Aligned_cols=93 Identities=13% Similarity=0.028 Sum_probs=56.9
Q ss_pred cCCCCCeEEEEcccc---HHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC---CCC--CCCCccEE
Q psy8015 23 GHSKRLDCLALTSNT---KQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA---SFG--DNGPYDAI 93 (165)
Q Consensus 23 ~~~~~~~vLei~GsG---~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~---~~~--~~~~fD~I 93 (165)
..+++++||-..|+| ..++.+++.. .+|++++.+++-.+.++ ++|.+. ++..+..+ ... ....+|++
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--~lGa~~--~~~~~~~~~~~~~~~~~~~g~Dvv 239 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE--RLGAKR--GINYRSEDFAAVIKAETGQGVDII 239 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--HHTCSE--EEETTTSCHHHHHHHHHSSCEEEE
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--hcCCCE--EEeCCchHHHHHHHHHhCCCceEE
Confidence 347899998653444 4455555543 58999999999888775 234332 12111110 000 02469988
Q ss_pred EEcCCCCCchHHHHhccccCcEEEEEe
Q psy8015 94 HVGAAYPRYPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 94 ~i~~~~~~~p~~l~~~LkpgG~lvi~~ 120 (165)
+-+.+.+ ..+...+.|+++|+++..-
T Consensus 240 id~~g~~-~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 240 LDMIGAA-YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EESCCGG-GHHHHHHTEEEEEEEEECC
T ss_pred EECCCHH-HHHHHHHHhccCCEEEEEE
Confidence 8765543 4556779999999987743
No 369
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.69 E-value=0.086 Score=41.69 Aligned_cols=91 Identities=11% Similarity=-0.070 Sum_probs=54.2
Q ss_pred cCCCCCeEEEEcccc---HHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC-CCCCCCCccEEEEcC
Q psy8015 23 GHSKRLDCLALTSNT---KQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA-SFGDNGPYDAIHVGA 97 (165)
Q Consensus 23 ~~~~~~~vLei~GsG---~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~-~~~~~~~fD~I~i~~ 97 (165)
..+++++||=..|+| ..+..+|+.. .+|++++.+++ .+.++ ++|.+. ++.-+..+ .......+|++|-..
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~-~~~~~--~lGa~~--~i~~~~~~~~~~~~~g~D~v~d~~ 223 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN-HAFLK--ALGAEQ--CINYHEEDFLLAISTPVDAVIDLV 223 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH-HHHHH--HHTCSE--EEETTTSCHHHHCCSCEEEEEESS
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch-HHHHH--HcCCCE--EEeCCCcchhhhhccCCCEEEECC
Confidence 457899998543355 4455555544 48999985444 55553 445542 22221111 001124699887765
Q ss_pred CCCCchHHHHhccccCcEEEEE
Q psy8015 98 AYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 98 ~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
..+.. +...+.|+++|+++..
T Consensus 224 g~~~~-~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 224 GGDVG-IQSIDCLKETGCIVSV 244 (321)
T ss_dssp CHHHH-HHHGGGEEEEEEEEEC
T ss_pred CcHHH-HHHHHhccCCCEEEEe
Confidence 54444 6778999999998874
No 370
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=93.66 E-value=0.015 Score=48.60 Aligned_cols=92 Identities=8% Similarity=-0.014 Sum_probs=57.9
Q ss_pred cCCCCCeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC----------------
Q psy8015 23 GHSKRLDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA---------------- 82 (165)
Q Consensus 23 ~~~~~~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~---------------- 82 (165)
..+++++||=. + |.|..+..+|+.. .+|++++.+++-++.++ ++|.+.+ +.-...+
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~--~lGa~~v--i~~~~~d~~~~~~~~~~~~~~~~ 300 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR--AMGAEAI--IDRNAEGYRFWKDENTQDPKEWK 300 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--HHTCCEE--EETTTTTCCSEEETTEECHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH--hhCCcEE--EecCcCcccccccccccchHHHH
Confidence 34789999866 4 3456666777655 48999999998888774 3454321 1111000
Q ss_pred -------CCCCCCCccEEEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 83 -------SFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 83 -------~~~~~~~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
.......+|++|-..+. ...+...+.|++||+++..
T Consensus 301 ~~~~~i~~~t~g~g~Dvvid~~G~-~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 301 RFGKRIRELTGGEDIDIVFEHPGR-ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHTSCCEEEEEECSCH-HHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHHhCCCCCcEEEEcCCc-hhHHHHHHHhhCCcEEEEE
Confidence 00112479988765544 4445667999999998874
No 371
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.50 E-value=0.04 Score=43.48 Aligned_cols=53 Identities=23% Similarity=0.272 Sum_probs=37.7
Q ss_pred CCCeEEEEccCCCCCC--CCCCccEEEEcCCCCCc--------------------------hHHHHhccccCcEEEEEec
Q psy8015 70 PDHDYDLIADGRASFG--DNGPYDAIHVGAAYPRY--------------------------PEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 70 ~~nV~~~~gD~~~~~~--~~~~fD~I~i~~~~~~~--------------------------p~~l~~~LkpgG~lvi~~~ 121 (165)
+.++++++||+.+.+. +.++||+|+.+...... -.++.+.|||||.+++.++
T Consensus 19 ~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 19 FGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp --CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 4568999999876332 34689999998765311 0145689999999999887
Q ss_pred C
Q psy8015 122 D 122 (165)
Q Consensus 122 ~ 122 (165)
.
T Consensus 99 d 99 (297)
T 2zig_A 99 D 99 (297)
T ss_dssp C
T ss_pred C
Confidence 4
No 372
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=93.47 E-value=0.025 Score=45.94 Aligned_cols=89 Identities=7% Similarity=-0.045 Sum_probs=56.9
Q ss_pred CCCCeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC------CCCCCCCccEEE
Q psy8015 25 SKRLDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA------SFGDNGPYDAIH 94 (165)
Q Consensus 25 ~~~~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~------~~~~~~~fD~I~ 94 (165)
+++++||=. + +.|..+..+|+.. .+|+++. +++-.+.++ ++|.+. ++.-+..+ ... .+.+|++|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~--~lGa~~--vi~~~~~~~~~~v~~~t-~g~~d~v~ 236 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAK--SRGAEE--VFDYRAPNLAQTIRTYT-KNNLRYAL 236 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH--HTTCSE--EEETTSTTHHHHHHHHT-TTCCCEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHH--HcCCcE--EEECCCchHHHHHHHHc-cCCccEEE
Confidence 688999988 5 3678888888765 4788885 777776664 456532 22211110 011 23599988
Q ss_pred EcCCCCCchHHHHhcc-ccCcEEEEE
Q psy8015 95 VGAAYPRYPEIFIHHL-KSGGRLVIP 119 (165)
Q Consensus 95 i~~~~~~~p~~l~~~L-kpgG~lvi~ 119 (165)
-..+.+...+..++.| ++||+++..
T Consensus 237 d~~g~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 237 DCITNVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp ESSCSHHHHHHHHHHSCTTCEEEEES
T ss_pred ECCCchHHHHHHHHHhhcCCCEEEEE
Confidence 7655545556667888 699998764
No 373
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.29 E-value=0.11 Score=41.25 Aligned_cols=67 Identities=9% Similarity=-0.116 Sum_probs=47.0
Q ss_pred CeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCC-CCCCccEEEEcCC
Q psy8015 28 LDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFG-DNGPYDAIHVGAA 98 (165)
Q Consensus 28 ~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~-~~~~fD~I~i~~~ 98 (165)
.+|+|+ ||.|-++.-|-+.. .-|.++|+++.+.+.-+.. + +-+++.+|..+... +....|+++-+..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N-~---~~~~~~~DI~~i~~~~~~~~D~l~ggpP 70 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESN-H---SAKLIKGDISKISSDEFPKCDGIIGGPP 70 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHH-C---CSEEEESCGGGCCGGGSCCCSEEECCCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHH-C---CCCcccCChhhCCHhhCCcccEEEecCC
Confidence 479999 99999998777654 4678999999988865422 1 13677888765322 2356898766543
No 374
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.27 E-value=0.11 Score=41.22 Aligned_cols=70 Identities=16% Similarity=0.110 Sum_probs=49.9
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCCc---EEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCC----CCCCccEEEEc
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIPN---SFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFG----DNGPYDAIHVG 96 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~~---V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~----~~~~fD~I~i~ 96 (165)
....+++|+ ||.|.++.-+.+..-+ |+++|+++...+.-+.. .++..++.+|..+... +.+.+|+++.+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N---~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR---HQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHH---TTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHh---CCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 356789999 9999999888776533 69999999988765422 2345678888765322 12469988886
Q ss_pred C
Q psy8015 97 A 97 (165)
Q Consensus 97 ~ 97 (165)
.
T Consensus 91 p 91 (295)
T 2qrv_A 91 S 91 (295)
T ss_dssp C
T ss_pred C
Confidence 4
No 375
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=93.25 E-value=0.052 Score=43.90 Aligned_cols=69 Identities=7% Similarity=-0.135 Sum_probs=48.2
Q ss_pred CeEEEE-ccccHHHHHHhccC---CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCC---CCCccEEEEcCCC
Q psy8015 28 LDCLAL-TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGD---NGPYDAIHVGAAY 99 (165)
Q Consensus 28 ~~vLei-~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~---~~~fD~I~i~~~~ 99 (165)
-+++|+ ||.|-++.-+.+.. ..|.++|+++...+.-+.. ..+..++.+|..+..+. ...+|+++.+..+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N---~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPC 79 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHN---FPETNLLNRNIQQLTPQVIKKWNVDTILMSPPC 79 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHH---CTTSCEECCCGGGCCHHHHHHTTCCEEEECCCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHh---CCCCceeccccccCCHHHhccCCCCEEEecCCC
Confidence 479999 99999998887654 4588999999998866421 22345667887553221 1268988876544
No 376
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=93.18 E-value=0.049 Score=43.20 Aligned_cols=92 Identities=4% Similarity=-0.070 Sum_probs=55.5
Q ss_pred CCCCC-eEEEE-c--cccHHHHHHhcc-CCcEEEEeCCHHHHHhcccccCCCCCeE-EEEccC--CCCCCCCCCccEEEE
Q psy8015 24 HSKRL-DCLAL-T--SNTKQSTTLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHDY-DLIADG--RASFGDNGPYDAIHV 95 (165)
Q Consensus 24 ~~~~~-~vLei-~--GsG~~t~~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~-~~~gD~--~~~~~~~~~fD~I~i 95 (165)
.++++ +||=. + |.|..+..+++. ..+|++++.+++-.+.++ ++|.+.+- ....|. ..... .+.+|++|-
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~--~lGa~~v~~~~~~~~~~~~~~~-~~~~d~vid 223 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK--QLGASEVISREDVYDGTLKALS-KQQWQGAVD 223 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH--HHTCSEEEEHHHHCSSCCCSSC-CCCEEEEEE
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HcCCcEEEECCCchHHHHHHhh-cCCccEEEE
Confidence 46675 88877 5 345555666654 358999999987777664 34543321 101111 11111 246998877
Q ss_pred cCCCCCchHHHHhccccCcEEEEE
Q psy8015 96 GAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 96 ~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
.... ...+...+.|++||+++..
T Consensus 224 ~~g~-~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 224 PVGG-KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp SCCT-HHHHHHHTTEEEEEEEEEC
T ss_pred CCcH-HHHHHHHHhhcCCCEEEEE
Confidence 6554 3445667999999998864
No 377
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.15 E-value=0.079 Score=45.04 Aligned_cols=73 Identities=8% Similarity=-0.102 Sum_probs=49.4
Q ss_pred CCeEEEE-ccccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCC-----------------CC
Q psy8015 27 RLDCLAL-TSNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFG-----------------DN 87 (165)
Q Consensus 27 ~~~vLei-~GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~-----------------~~ 87 (165)
.-+++|+ ||.|.++.-+.+.. ..|.++|+++...+.-+...-..++..++.+|..+... ..
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~~~ 167 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQHI 167 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHHHS
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhhcC
Confidence 3589999 99999998887765 45899999999887654221112345667788754211 12
Q ss_pred CCccEEEEcCCC
Q psy8015 88 GPYDAIHVGAAY 99 (165)
Q Consensus 88 ~~fD~I~i~~~~ 99 (165)
..+|+++.+..+
T Consensus 168 ~~~Dvl~gGpPC 179 (482)
T 3me5_A 168 PEHDVLLAGFPC 179 (482)
T ss_dssp CCCSEEEEECCC
T ss_pred CCCCEEEecCCC
Confidence 468988876544
No 378
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=92.98 E-value=0.019 Score=46.37 Aligned_cols=92 Identities=10% Similarity=-0.073 Sum_probs=56.5
Q ss_pred cCCCCCeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC---C---CCCCCCccE
Q psy8015 23 GHSKRLDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA---S---FGDNGPYDA 92 (165)
Q Consensus 23 ~~~~~~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~---~---~~~~~~fD~ 92 (165)
..+++++||-. + |.|..++.+++.. .+|++++.+++..+.++ ++|.+. ++..+-.+ . ......+|+
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--~~ga~~--~~d~~~~~~~~~~~~~~~~~~~D~ 242 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL--QNGAHE--VFNHREVNYIDKIKKYVGEKGIDI 242 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--HTTCSE--EEETTSTTHHHHHHHHHCTTCEEE
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH--HcCCCE--EEeCCCchHHHHHHHHcCCCCcEE
Confidence 34789999988 5 3455555555543 58999999998888664 334332 12111100 0 001236999
Q ss_pred EEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 93 IHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 93 I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
++-+.+.+. .+...+.|+++|+++..
T Consensus 243 vi~~~G~~~-~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 243 IIEMLANVN-LSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp EEESCHHHH-HHHHHHHEEEEEEEEEC
T ss_pred EEECCChHH-HHHHHHhccCCCEEEEE
Confidence 987655432 34567999999998764
No 379
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.96 E-value=0.053 Score=43.44 Aligned_cols=54 Identities=13% Similarity=0.245 Sum_probs=39.3
Q ss_pred CCCeEEEEccCCCCCC--CCCCccEEEEcCCCCCc--------------------hHHHHhccccCcEEEEEecCC
Q psy8015 70 PDHDYDLIADGRASFG--DNGPYDAIHVGAAYPRY--------------------PEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 70 ~~nV~~~~gD~~~~~~--~~~~fD~I~i~~~~~~~--------------------p~~l~~~LkpgG~lvi~~~~~ 123 (165)
.++..+++||+.+.+. +.++||+|+++.....- ..++.+.|+|||.+++.+++.
T Consensus 12 ~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 12 TSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp CSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred cCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 3468999999865322 34689999999765321 124679999999999988754
No 380
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=92.95 E-value=0.033 Score=44.71 Aligned_cols=90 Identities=9% Similarity=-0.029 Sum_probs=51.6
Q ss_pred cCCCCCeEEEE-c--cccHHHHHHhccC--CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCC--CCC--CCCCCccEE
Q psy8015 23 GHSKRLDCLAL-T--SNTKQSTTLPTFI--PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR--ASF--GDNGPYDAI 93 (165)
Q Consensus 23 ~~~~~~~vLei-~--GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~--~~~--~~~~~fD~I 93 (165)
..+++++||=. + +.|..+..+|+.. .+|++++ +++-.+.++ +|.+.+ +..+.. +.. ...+.+|+|
T Consensus 139 ~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~---~ga~~~--~~~~~~~~~~~~~~~~~g~Dvv 212 (349)
T 4a27_A 139 NLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK---DSVTHL--FDRNADYVQEVKRISAEGVDIV 212 (349)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG---GGSSEE--EETTSCHHHHHHHHCTTCEEEE
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH---cCCcEE--EcCCccHHHHHHHhcCCCceEE
Confidence 34789999977 5 3467777777764 4789888 554444443 454332 222110 000 012469988
Q ss_pred EEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 94 HVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 94 ~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
|-....+.. +...+.|+++|+++..
T Consensus 213 ~d~~g~~~~-~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 213 LDCLCGDNT-GKGLSLLKPLGTYILY 237 (349)
T ss_dssp EEECC--------CTTEEEEEEEEEE
T ss_pred EECCCchhH-HHHHHHhhcCCEEEEE
Confidence 876555554 6677999999999875
No 381
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.77 E-value=0.03 Score=44.89 Aligned_cols=90 Identities=8% Similarity=-0.084 Sum_probs=56.2
Q ss_pred CCCCCeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCC--CC---CCCCCCccEEE
Q psy8015 24 HSKRLDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR--AS---FGDNGPYDAIH 94 (165)
Q Consensus 24 ~~~~~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~--~~---~~~~~~fD~I~ 94 (165)
.+++++||-+ + |.|..++.+++.. .+|+++ .+++-.+.++ ++|.+. +..+.. +. ......+|++|
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~--~lGa~~---i~~~~~~~~~~~~~~~~~g~D~vi 221 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVR--DLGATP---IDASREPEDYAAEHTAGQGFDLVY 221 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHH--HHTSEE---EETTSCHHHHHHHHHTTSCEEEEE
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHH--HcCCCE---eccCCCHHHHHHHHhcCCCceEEE
Confidence 4789999977 3 3356666666654 489999 8888777764 345432 221110 00 01124699887
Q ss_pred EcCCCCCchHHHHhccccCcEEEEEe
Q psy8015 95 VGAAYPRYPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 95 i~~~~~~~p~~l~~~LkpgG~lvi~~ 120 (165)
-..+. ...+...+.|+++|+++..-
T Consensus 222 d~~g~-~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 222 DTLGG-PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp ESSCT-HHHHHHHHHEEEEEEEEESC
T ss_pred ECCCc-HHHHHHHHHHhcCCeEEEEc
Confidence 66553 34456679999999988743
No 382
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=92.70 E-value=0.093 Score=42.18 Aligned_cols=92 Identities=11% Similarity=0.069 Sum_probs=52.3
Q ss_pred cCCCCCeEEEE-c--cccHHHHHHhccCC-cEEE-EeCCHH---HHHhcccccCCCCCeEEEEc------cCCCCCCCCC
Q psy8015 23 GHSKRLDCLAL-T--SNTKQSTTLPTFIP-NSFN-INVYYY---LSGGPLSSTIDPDHDYDLIA------DGRASFGDNG 88 (165)
Q Consensus 23 ~~~~~~~vLei-~--GsG~~t~~la~~~~-~V~a-iD~~~~---~~~~A~~~~~~~~nV~~~~g------D~~~~~~~~~ 88 (165)
..+++++||=. + |.|..+..+|+..+ +|++ ++.+++ ..+.+ +++|.+.+ +.. +..+.....+
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~--~~lGa~~v--i~~~~~~~~~~~~~~~~~~ 239 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRL--KSLGAEHV--ITEEELRRPEMKNFFKDMP 239 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHH--HHTTCSEE--EEHHHHHSGGGGGTTSSSC
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHH--HhcCCcEE--EecCcchHHHHHHHHhCCC
Confidence 45789999987 5 45666777777543 5554 455443 23333 34565432 221 1111111112
Q ss_pred CccEEEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 89 PYDAIHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 89 ~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
.+|+||-....+.. ....+.|++||+++..
T Consensus 240 ~~Dvvid~~g~~~~-~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 240 QPRLALNCVGGKSS-TELLRQLARGGTMVTY 269 (357)
T ss_dssp CCSEEEESSCHHHH-HHHHTTSCTTCEEEEC
T ss_pred CceEEEECCCcHHH-HHHHHhhCCCCEEEEE
Confidence 49988765543333 3567999999998874
No 383
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=92.27 E-value=0.62 Score=37.98 Aligned_cols=101 Identities=15% Similarity=0.049 Sum_probs=63.9
Q ss_pred HHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhc---ccccCCCCC--eEEEEccCCCCCCC
Q psy8015 13 AVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGP---LSSTIDPDH--DYDLIADGRASFGD 86 (165)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A---~~~~~~~~n--V~~~~gD~~~~~~~ 86 (165)
+=..+++.+.....+.+||-+ -+-|.++..|+.. .++.+.-| .+.+.| +++..++++ |++... .+..
T Consensus 25 ~d~~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~--~~~~~~ds-~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~-- 97 (375)
T 4dcm_A 25 ADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEH--KPYSIGDS-YISELATRENLRLNGIDESSVKFLDS--TADY-- 97 (375)
T ss_dssp HHHHHHHTTTTCCCCSCEEEECCSSSHHHHHTGGG--CCEEEESC-HHHHHHHHHHHHHTTCCGGGSEEEET--TSCC--
T ss_pred HHHHHHHhhhhccCCCCEEEECCCCCHHHHhhccC--CceEEEhH-HHHHHHHHHHHHHcCCCccceEeccc--cccc--
Confidence 334566665443356789999 9999999999853 56777433 333333 355556653 665543 2222
Q ss_pred CCCccEEEEcCCCCC-----chHHHHhccccCcEEEEEe
Q psy8015 87 NGPYDAIHVGAAYPR-----YPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 87 ~~~fD~I~i~~~~~~-----~p~~l~~~LkpgG~lvi~~ 120 (165)
.+.||.+++.-..+. ....+...|+||+++++.-
T Consensus 98 ~~~~~~v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 98 PQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp CSSCSEEEEECCSCHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred ccCCCEEEEEcCCCHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 357999998655431 1235778899999987643
No 384
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.17 E-value=0.11 Score=35.87 Aligned_cols=88 Identities=7% Similarity=-0.011 Sum_probs=54.0
Q ss_pred CeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--CC--CCCCccEEEEcCCC
Q psy8015 28 LDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--FG--DNGPYDAIHVGAAY 99 (165)
Q Consensus 28 ~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~~--~~~~fD~I~i~~~~ 99 (165)
++++= +|.|.++..+++. ..+|+.+|.+++.++.++.. ++.++.+|..+. +. ....+|.+++....
T Consensus 7 ~~v~I-~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~ 80 (141)
T 3llv_A 7 YEYIV-IGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-----GFDAVIADPTDESFYRSLDLEGVSAVLITGSD 80 (141)
T ss_dssp CSEEE-ECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-----TCEEEECCTTCHHHHHHSCCTTCSEEEECCSC
T ss_pred CEEEE-ECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-----CCcEEECCCCCHHHHHhCCcccCCEEEEecCC
Confidence 45543 5778888777664 45899999999988766421 367888987642 11 12468999886553
Q ss_pred CCchH---HHHhccccCcEEEEEecC
Q psy8015 100 PRYPE---IFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 100 ~~~p~---~l~~~LkpgG~lvi~~~~ 122 (165)
..... ...+.+. ..++++-...
T Consensus 81 ~~~n~~~~~~a~~~~-~~~iia~~~~ 105 (141)
T 3llv_A 81 DEFNLKILKALRSVS-DVYAIVRVSS 105 (141)
T ss_dssp HHHHHHHHHHHHHHC-CCCEEEEESC
T ss_pred HHHHHHHHHHHHHhC-CceEEEEEcC
Confidence 21111 2334455 5666665543
No 385
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=92.01 E-value=0.1 Score=42.00 Aligned_cols=73 Identities=3% Similarity=-0.017 Sum_probs=49.5
Q ss_pred CCCeEEEE-ccccHHHHHHhccC---CcE-EEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCC---CCCccEEEEcC
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTFI---PNS-FNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGD---NGPYDAIHVGA 97 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~~---~~V-~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~---~~~fD~I~i~~ 97 (165)
..-+++|+ ||.|.++.-+.+.. ..| .++|+++.+.+.-+.. ++ +. ++.+|..+..+. ...+|+++.+.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N-~~--~~-~~~~DI~~~~~~~i~~~~~Dil~ggp 84 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKN-FK--EE-VQVKNLDSISIKQIESLNCNTWFMSP 84 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHH-HC--CC-CBCCCTTTCCHHHHHHTCCCEEEECC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHH-CC--CC-cccCChhhcCHHHhccCCCCEEEecC
Confidence 45689999 99999998887765 456 7999999998876421 11 11 456776543221 12689998876
Q ss_pred CCCCc
Q psy8015 98 AYPRY 102 (165)
Q Consensus 98 ~~~~~ 102 (165)
.+...
T Consensus 85 PCQ~f 89 (327)
T 3qv2_A 85 PCQPY 89 (327)
T ss_dssp CCTTC
T ss_pred CccCc
Confidence 65444
No 386
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.99 E-value=0.38 Score=39.75 Aligned_cols=92 Identities=8% Similarity=-0.144 Sum_probs=56.8
Q ss_pred cCCCCCeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCC-----------------
Q psy8015 23 GHSKRLDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR----------------- 81 (165)
Q Consensus 23 ~~~~~~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~----------------- 81 (165)
..+++++||=. + |.|..++.+++.. .+|++++.+++-.+.++ ++|.+.+ +-..+..
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~--~lGa~~~-i~~~~~~~~~~~~~~~~~~~~~~~ 293 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR--ALGCDLV-INRAELGITDDIADDPRRVVETGR 293 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--HTTCCCE-EEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--hcCCCEE-Eecccccccccccccccccchhhh
Confidence 34789999855 3 2345556666654 48999999999888774 4455432 1111100
Q ss_pred ---C---CCCCCCCccEEEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 82 ---A---SFGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 82 ---~---~~~~~~~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
+ ... ...+|++|-..+.. ..+...+.|++||+++..
T Consensus 294 ~~~~~v~~~~-g~g~Dvvid~~G~~-~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 294 KLAKLVVEKA-GREPDIVFEHTGRV-TFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHH-SSCCSEEEECSCHH-HHHHHHHHSCTTCEEEES
T ss_pred HHHHHHHHHh-CCCceEEEECCCch-HHHHHHHHHhcCCEEEEE
Confidence 0 000 24699888765543 345667899999998874
No 387
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=91.94 E-value=0.047 Score=44.04 Aligned_cols=91 Identities=10% Similarity=-0.044 Sum_probs=55.9
Q ss_pred cCCCCCeEEEE--ccccHHHHHHhccC--CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCC-----CCCCCCCCccEE
Q psy8015 23 GHSKRLDCLAL--TSNTKQSTTLPTFI--PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR-----ASFGDNGPYDAI 93 (165)
Q Consensus 23 ~~~~~~~vLei--~GsG~~t~~la~~~--~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~-----~~~~~~~~fD~I 93 (165)
..+++++||=. .|.|..+..+|+.. .+|+++|.+++-.+.++ ++|.+.+ +.-+.. ........+|++
T Consensus 183 ~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~--~lGa~~v--i~~~~~~~~~v~~~~~g~g~Dvv 258 (359)
T 1h2b_A 183 TLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE--RLGADHV--VDARRDPVKQVMELTRGRGVNVA 258 (359)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH--HTTCSEE--EETTSCHHHHHHHHTTTCCEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH--HhCCCEE--EeccchHHHHHHHHhCCCCCcEE
Confidence 45789999998 44566667777644 48999999999888775 4554322 221100 011112369998
Q ss_pred EEcCCCCC--chHHHHhccccCcEEEEE
Q psy8015 94 HVGAAYPR--YPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 94 ~i~~~~~~--~p~~l~~~LkpgG~lvi~ 119 (165)
|-....+. ..+...+. ++|+++..
T Consensus 259 id~~G~~~~~~~~~~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 259 MDFVGSQATVDYTPYLLG--RMGRLIIV 284 (359)
T ss_dssp EESSCCHHHHHHGGGGEE--EEEEEEEC
T ss_pred EECCCCchHHHHHHHhhc--CCCEEEEE
Confidence 87655442 33333444 99998774
No 388
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.75 E-value=0.086 Score=46.08 Aligned_cols=95 Identities=12% Similarity=-0.067 Sum_probs=61.1
Q ss_pred CCCeEEEE-ccccHHHHHHhcc------------CC--cEEEEeC---CHHHHHhc-c-cc-----------cC------
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTF------------IP--NSFNINV---YYYLSGGP-L-SS-----------TI------ 68 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~------------~~--~V~aiD~---~~~~~~~A-~-~~-----------~~------ 68 (165)
+.-+|||+ -|+|+......+. .. +++++|. +++-++.| + .. ..
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 34589999 9999877544332 11 5899998 66666533 1 00 00
Q ss_pred --------CCCCeEEEEccCCCCCCC-----CCCccEEEEcCCCCC-ch--------HHHHhccccCcEEEEEe
Q psy8015 69 --------DPDHDYDLIADGRASFGD-----NGPYDAIHVGAAYPR-YP--------EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 69 --------~~~nV~~~~gD~~~~~~~-----~~~fD~I~i~~~~~~-~p--------~~l~~~LkpgG~lvi~~ 120 (165)
+.-.+++..||+.+.++. ...||++|.++-.+. -| ..+.+.++|||++.-..
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 112366788998654442 257999999985542 22 35788999999987643
No 389
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=91.52 E-value=0.062 Score=43.13 Aligned_cols=92 Identities=7% Similarity=-0.049 Sum_probs=55.3
Q ss_pred cCCCC--CeEEEE-c--cccHHHHHHhccC-C-cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC------CCCCCCC
Q psy8015 23 GHSKR--LDCLAL-T--SNTKQSTTLPTFI-P-NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA------SFGDNGP 89 (165)
Q Consensus 23 ~~~~~--~~vLei-~--GsG~~t~~la~~~-~-~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~------~~~~~~~ 89 (165)
..+++ ++||-. + |.|..++.+++.. . +|++++.+++..+.++. .+|.+. ++..+..+ .... +.
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~-~~g~~~--~~d~~~~~~~~~~~~~~~-~~ 230 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTS-ELGFDA--AINYKKDNVAEQLRESCP-AG 230 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TSCCSE--EEETTTSCHHHHHHHHCT-TC
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH-HcCCce--EEecCchHHHHHHHHhcC-CC
Confidence 45788 898877 4 3344555555543 4 89999999887776641 245431 12111000 0011 26
Q ss_pred ccEEEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 90 YDAIHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 90 fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
+|+++-+.+. ...+...+.|+++|+++..
T Consensus 231 ~d~vi~~~G~-~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 231 VDVYFDNVGG-NISDTVISQMNENSHIILC 259 (357)
T ss_dssp EEEEEESCCH-HHHHHHHHTEEEEEEEEEC
T ss_pred CCEEEECCCH-HHHHHHHHHhccCcEEEEE
Confidence 9998876653 3345677999999998864
No 390
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.05 E-value=0.41 Score=34.37 Aligned_cols=89 Identities=9% Similarity=-0.010 Sum_probs=54.3
Q ss_pred CCeEEEEccccHHHHHHhc----c-CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--CC---CCCCccEEEEc
Q psy8015 27 RLDCLALTSNTKQSTTLPT----F-IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--FG---DNGPYDAIHVG 96 (165)
Q Consensus 27 ~~~vLei~GsG~~t~~la~----~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~~---~~~~fD~I~i~ 96 (165)
+++|+= +|.|.++..+++ . ..+|+.+|.+++.++.++ .. ++.++.+|..+. +. ....+|+|++.
T Consensus 39 ~~~v~I-iG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~--~~---g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 39 HAQVLI-LGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHR--SE---GRNVISGDATDPDFWERILDTGHVKLVLLA 112 (183)
T ss_dssp TCSEEE-ECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH--HT---TCCEEECCTTCHHHHHTBCSCCCCCEEEEC
T ss_pred CCcEEE-ECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH--HC---CCCEEEcCCCCHHHHHhccCCCCCCEEEEe
Confidence 456653 588888766664 3 457999999998887654 22 355677876431 11 13468999985
Q ss_pred CCCCCchH---HHHhccccCcEEEEEec
Q psy8015 97 AAYPRYPE---IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 97 ~~~~~~p~---~l~~~LkpgG~lvi~~~ 121 (165)
........ ...+.+.|+.++++...
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 113 MPHHQGNQTALEQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CSSHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred CCChHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 44322222 23455666677776544
No 391
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.04 E-value=0.52 Score=35.27 Aligned_cols=89 Identities=6% Similarity=-0.127 Sum_probs=57.9
Q ss_pred CCeEEEEccccHHHHHHhccCC---cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--C--CCCCCccEEEEcCCC
Q psy8015 27 RLDCLALTSNTKQSTTLPTFIP---NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--F--GDNGPYDAIHVGAAY 99 (165)
Q Consensus 27 ~~~vLei~GsG~~t~~la~~~~---~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~--~~~~~fD~I~i~~~~ 99 (165)
.++++= +|.|.++..+++... .|+.+|.+++.++.++ .++.++.+|+.+. + ......|.+++....
T Consensus 9 ~~~viI-~G~G~~G~~la~~L~~~g~v~vid~~~~~~~~~~------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (234)
T 2aef_A 9 SRHVVI-CGWSESTLECLRELRGSEVFVLAEDENVRKKVLR------SGANFVHGDPTRVSDLEKANVRGARAVIVDLES 81 (234)
T ss_dssp -CEEEE-ESCCHHHHHHHHHSTTSEEEEEESCGGGHHHHHH------TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSC
T ss_pred CCEEEE-ECCChHHHHHHHHHHhCCeEEEEECCHHHHHHHh------cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCC
Confidence 445542 688999988877542 2999999998877554 3578999998642 1 123578999986544
Q ss_pred CCch---HHHHhccccCcEEEEEecC
Q psy8015 100 PRYP---EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 100 ~~~p---~~l~~~LkpgG~lvi~~~~ 122 (165)
.... ....+.+.|+.++++-+.+
T Consensus 82 d~~n~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 82 DSETIHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred cHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 3211 2345667787787776644
No 392
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.83 E-value=0.27 Score=40.81 Aligned_cols=83 Identities=2% Similarity=-0.098 Sum_probs=57.4
Q ss_pred ccccHHHHHHhccC----CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--C--CCCCCccEEEEcCCCCCch--
Q psy8015 34 TSNTKQSTTLPTFI----PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--F--GDNGPYDAIHVGAAYPRYP-- 103 (165)
Q Consensus 34 ~GsG~~t~~la~~~----~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~--~~~~~fD~I~i~~~~~~~p-- 103 (165)
||.|.++..+++.. ..|+.+|.|++.++.++. . ++.++.||+.+. + ......|+|++.......-
T Consensus 10 iG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~--~---g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~~ 84 (413)
T 3l9w_A 10 AGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK--F---GMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQ 84 (413)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH--T---TCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHHH
T ss_pred ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh--C---CCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHHH
Confidence 79999998888753 589999999999987752 2 356789998652 1 1235789998865443211
Q ss_pred -HHHHhccccCcEEEEEec
Q psy8015 104 -EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 104 -~~l~~~LkpgG~lvi~~~ 121 (165)
-...+.+.|.-++++-..
T Consensus 85 i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 85 LTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp HHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHhCCCCeEEEEEC
Confidence 134567778878777554
No 393
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.57 E-value=0.72 Score=32.24 Aligned_cols=92 Identities=5% Similarity=-0.036 Sum_probs=54.9
Q ss_pred CCCCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--CC--CCCCccEEEEc
Q psy8015 25 SKRLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--FG--DNGPYDAIHVG 96 (165)
Q Consensus 25 ~~~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~~--~~~~fD~I~i~ 96 (165)
.++++|+= +|.|.++..+++. ..+|+.+|.+++.++.++. .. ++.++.+|.... +. ....+|+|++.
T Consensus 17 ~~~~~v~I-iG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-~~---g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~ 91 (155)
T 2g1u_A 17 QKSKYIVI-FGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-EF---SGFTVVGDAAEFETLKECGMEKADMVFAF 91 (155)
T ss_dssp CCCCEEEE-ECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-TC---CSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred cCCCcEEE-ECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-cC---CCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence 46778764 5778888766654 3589999999987765431 22 345677775321 11 12468999987
Q ss_pred CCCCCchHHH---HhccccCcEEEEEec
Q psy8015 97 AAYPRYPEIF---IHHLKSGGRLVIPIG 121 (165)
Q Consensus 97 ~~~~~~p~~l---~~~LkpgG~lvi~~~ 121 (165)
...+.....+ .+.+.+..+++....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 92 TNDDSTNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp SSCHHHHHHHHHHHHHTSCCSEEEEECS
T ss_pred eCCcHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 6554333333 333445556665544
No 394
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.35 E-value=1.3 Score=33.52 Aligned_cols=74 Identities=14% Similarity=0.031 Sum_probs=45.6
Q ss_pred CCCeEEEEccccH------HHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC----------CC
Q psy8015 26 KRLDCLALTSNTK------QSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG----------DN 87 (165)
Q Consensus 26 ~~~~vLei~GsG~------~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~----------~~ 87 (165)
.++++|=.-|+|. ++..|++...+|+.++.+++..+.++ .+..+..++.++..|..+.-. ..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 3556665533333 34455555678999999887665553 333444479999999764210 01
Q ss_pred CCccEEEEcCCC
Q psy8015 88 GPYDAIHVGAAY 99 (165)
Q Consensus 88 ~~fD~I~i~~~~ 99 (165)
++.|.++.+++.
T Consensus 86 g~id~li~~Ag~ 97 (266)
T 3oig_A 86 GVIHGIAHCIAF 97 (266)
T ss_dssp SCCCEEEECCCC
T ss_pred CCeeEEEEcccc
Confidence 478999888764
No 395
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=89.83 E-value=0.03 Score=44.89 Aligned_cols=88 Identities=9% Similarity=-0.041 Sum_probs=52.8
Q ss_pred CCC-CeEEEE-ccccHHHH---HHhcc-CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCC-------CCCcc
Q psy8015 25 SKR-LDCLAL-TSNTKQST---TLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGD-------NGPYD 91 (165)
Q Consensus 25 ~~~-~~vLei-~GsG~~t~---~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~-------~~~fD 91 (165)
.++ ++|| | .|+|.++. .+++. ..+|++++.+++-.+.++ ++|.+. ++..+.. .+.+ ...+|
T Consensus 162 ~~g~~~vl-i~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~--~~Ga~~--~~~~~~~-~~~~~v~~~~~~~g~D 235 (349)
T 3pi7_A 162 QEGEKAFV-MTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK--DIGAAH--VLNEKAP-DFEATLREVMKAEQPR 235 (349)
T ss_dssp HHCCSEEE-ESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH--HHTCSE--EEETTST-THHHHHHHHHHHHCCC
T ss_pred hCCCCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HcCCCE--EEECCcH-HHHHHHHHHhcCCCCc
Confidence 355 4554 5 56665554 44443 358999999998888775 345432 2222111 1100 13699
Q ss_pred EEEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 92 AIHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 92 ~I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
+++-....+.. +...+.|+++|+++..
T Consensus 236 ~vid~~g~~~~-~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 236 IFLDAVTGPLA-SAIFNAMPKRARWIIY 262 (349)
T ss_dssp EEEESSCHHHH-HHHHHHSCTTCEEEEC
T ss_pred EEEECCCChhH-HHHHhhhcCCCEEEEE
Confidence 88776554333 5677999999998875
No 396
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.48 E-value=0.19 Score=40.80 Aligned_cols=91 Identities=8% Similarity=-0.043 Sum_probs=50.8
Q ss_pred CCeEEEEccccHHH---HHHhcc-CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCC-
Q psy8015 27 RLDCLALTSNTKQS---TTLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPR- 101 (165)
Q Consensus 27 ~~~vLei~GsG~~t---~~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~- 101 (165)
+++|+=+ |.|-.+ +.+++. ..+|+.+|++++.++.++. .+...+.....+..........+|+|+-....+.
T Consensus 167 ~~~VlVi-GaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 167 PGKVVIL-GGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLET--LFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp CCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred CCEEEEE-CCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH--hhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 4788877 335444 333333 3489999999988877641 1111232222211000001135899877654432
Q ss_pred -----chHHHHhccccCcEEEEEe
Q psy8015 102 -----YPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 102 -----~p~~l~~~LkpgG~lvi~~ 120 (165)
+.+...+.++|||+++-..
T Consensus 244 ~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 244 RAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp SCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCCeecCHHHHhhCCCCCEEEEEe
Confidence 3566778999999877643
No 397
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.18 E-value=2.4 Score=33.04 Aligned_cols=85 Identities=5% Similarity=-0.180 Sum_probs=54.6
Q ss_pred CCCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEE-ccCCCCCCCCCCccEEEEcCCCC
Q psy8015 26 KRLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLI-ADGRASFGDNGPYDAIHVGAAYP 100 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~-gD~~~~~~~~~~fD~I~i~~~~~ 100 (165)
++++|+=+ |.|..+..+++. ..+|+.+|.+++-.+.++ ..| +++.. .+..+. ....|+|++....+
T Consensus 154 ~g~~v~Ii-G~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~--~~g---~~~~~~~~l~~~---l~~aDvVi~~~p~~ 224 (293)
T 3d4o_A 154 HGANVAVL-GLGRVGMSVARKFAALGAKVKVGARESDLLARIA--EMG---MEPFHISKAAQE---LRDVDVCINTIPAL 224 (293)
T ss_dssp TTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--HTT---SEEEEGGGHHHH---TTTCSEEEECCSSC
T ss_pred CCCEEEEE-eeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH--HCC---CeecChhhHHHH---hcCCCEEEECCChH
Confidence 57888777 667777666653 348999999987655442 233 23322 121111 24689999987666
Q ss_pred CchHHHHhccccCcEEEEE
Q psy8015 101 RYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 101 ~~p~~l~~~LkpgG~lvi~ 119 (165)
.+.+..++.+|||+.++-.
T Consensus 225 ~i~~~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 225 VVTANVLAEMPSHTFVIDL 243 (293)
T ss_dssp CBCHHHHHHSCTTCEEEEC
T ss_pred HhCHHHHHhcCCCCEEEEe
Confidence 6666777899998876543
No 398
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.28 E-value=0.41 Score=40.79 Aligned_cols=84 Identities=7% Similarity=-0.172 Sum_probs=54.9
Q ss_pred CCCCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCC
Q psy8015 25 SKRLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYP 100 (165)
Q Consensus 25 ~~~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~ 100 (165)
.+|++|+=+ |.|.++..+++. ..+|+++|.++...+.|+ ..|. ++ .+..+. ....|+|+......
T Consensus 272 l~GktV~Ii-G~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~--~~Ga---~~--~~l~e~---l~~aDvVi~atgt~ 340 (494)
T 3ce6_A 272 IGGKKVLIC-GYGDVGKGCAEAMKGQGARVSVTEIDPINALQAM--MEGF---DV--VTVEEA---IGDADIVVTATGNK 340 (494)
T ss_dssp CTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH--HTTC---EE--CCHHHH---GGGCSEEEECSSSS
T ss_pred CCcCEEEEE-ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HcCC---EE--ecHHHH---HhCCCEEEECCCCH
Confidence 578888777 556666555543 348999999998877764 2243 21 121111 13589999886655
Q ss_pred Cch-HHHHhccccCcEEEEE
Q psy8015 101 RYP-EIFIHHLKSGGRLVIP 119 (165)
Q Consensus 101 ~~p-~~l~~~LkpgG~lvi~ 119 (165)
++. ...++.+|+||+++..
T Consensus 341 ~~i~~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 341 DIIMLEHIKAMKDHAILGNI 360 (494)
T ss_dssp CSBCHHHHHHSCTTCEEEEC
T ss_pred HHHHHHHHHhcCCCcEEEEe
Confidence 544 4778999999997653
No 399
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=88.27 E-value=0.39 Score=43.08 Aligned_cols=91 Identities=11% Similarity=0.050 Sum_probs=53.0
Q ss_pred CCCCCeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHHHHhcccccCCCCCeEE-EEccCCC---CCCCCCCccEEEE
Q psy8015 24 HSKRLDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYLSGGPLSSTIDPDHDYD-LIADGRA---SFGDNGPYDAIHV 95 (165)
Q Consensus 24 ~~~~~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~-~~gD~~~---~~~~~~~fD~I~i 95 (165)
.++|++||=. + |.|..+..+|+.. .+|++++.+++ .+. ++ +|.+.+-- ...|..+ .......+|+|+-
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k-~~~--l~-lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld 418 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDK-WQA--VE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLN 418 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGG-GGG--SC-SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEE
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHH-hhh--hh-cChhheeecCChhHHHHHHHHcCCCCeEEEEE
Confidence 4689999977 3 3466677777765 48999986552 222 22 44332110 0001000 0111246998887
Q ss_pred cCCCCCchHHHHhccccCcEEEEE
Q psy8015 96 GAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 96 ~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
..+.+ ..+..++.|+|+|+++..
T Consensus 419 ~~gg~-~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 419 SLAGE-FADASLRMLPRGGRFLEL 441 (795)
T ss_dssp CCCTT-TTHHHHTSCTTCEEEEEC
T ss_pred CCCcH-HHHHHHHHhcCCCEEEEe
Confidence 65544 446677999999998874
No 400
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=87.64 E-value=0.084 Score=42.40 Aligned_cols=94 Identities=6% Similarity=-0.089 Sum_probs=52.1
Q ss_pred cCCCC-CeEEEE-c--cccHHHHHHhccC-CcEEEEeCCHHH----HHhcccccCCCCCeEEEE----ccCCCCCC----
Q psy8015 23 GHSKR-LDCLAL-T--SNTKQSTTLPTFI-PNSFNINVYYYL----SGGPLSSTIDPDHDYDLI----ADGRASFG---- 85 (165)
Q Consensus 23 ~~~~~-~~vLei-~--GsG~~t~~la~~~-~~V~aiD~~~~~----~~~A~~~~~~~~nV~~~~----gD~~~~~~---- 85 (165)
..+++ ++||=. + |.|..+..+|+.. .+|+++..+++- .+.+ +++|.+.+--.. .|..+...
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~--~~lGa~~vi~~~~~~~~~~~~~i~~~t~ 240 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASL--KELGATQVITEDQNNSREFGPTIKEWIK 240 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHH--HHHTCSEEEEHHHHHCGGGHHHHHHHHH
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHH--HhcCCeEEEecCccchHHHHHHHHHHhh
Confidence 34688 999876 3 3445566666653 478888654432 2333 345654321111 11111110
Q ss_pred -CCCCccEEEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 86 -DNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 86 -~~~~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
....+|+||-....+... ...+.|+++|+++..
T Consensus 241 ~~~~g~Dvvid~~G~~~~~-~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 241 QSGGEAKLALNCVGGKSST-GIARKLNNNGLMLTY 274 (364)
T ss_dssp HHTCCEEEEEESSCHHHHH-HHHHTSCTTCEEEEC
T ss_pred ccCCCceEEEECCCchhHH-HHHHHhccCCEEEEe
Confidence 123699888765544444 567999999998874
No 401
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.43 E-value=1.5 Score=33.22 Aligned_cols=65 Identities=8% Similarity=-0.147 Sum_probs=45.6
Q ss_pred CeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCC
Q psy8015 28 LDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYP 100 (165)
Q Consensus 28 ~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~ 100 (165)
++||= ||+|+++..+++. ..+|+++++++.-.+..+ . .+++++.+|..+ +. ...+|+|+..++..
T Consensus 6 ~~ilV-tGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~---~~~~~~~~D~~d-~~-~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 6 GTLLS-FGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIR--A---SGAEPLLWPGEE-PS-LDGVTHLLISTAPD 74 (286)
T ss_dssp CEEEE-ETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH--H---TTEEEEESSSSC-CC-CTTCCEEEECCCCB
T ss_pred CcEEE-ECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh--h---CCCeEEEecccc-cc-cCCCCEEEECCCcc
Confidence 35443 6779999887764 358999999886544321 1 368999999866 33 56789999887654
No 402
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.22 E-value=1.1 Score=33.09 Aligned_cols=83 Identities=11% Similarity=-0.036 Sum_probs=53.1
Q ss_pred ccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--CC--CCCCccEEEEcCCCCCch--
Q psy8015 34 TSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--FG--DNGPYDAIHVGAAYPRYP-- 103 (165)
Q Consensus 34 ~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~~--~~~~fD~I~i~~~~~~~p-- 103 (165)
||.|.++..+++. ..+|+.+|.+++.++..+. . .++.++.+|+.+. +. ....+|.+++........
T Consensus 6 iG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~-~---~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~ 81 (218)
T 3l4b_C 6 IGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAK-K---LKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVNLF 81 (218)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-H---SSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHHHH
T ss_pred ECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH-H---cCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHHHH
Confidence 7999988887764 3589999999998875431 1 1467899998642 11 135789998865443221
Q ss_pred -HHHHhccccCcEEEEEe
Q psy8015 104 -EIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 104 -~~l~~~LkpgG~lvi~~ 120 (165)
....+.+.|..++++-.
T Consensus 82 ~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 82 IAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp HHHHHHHTSCCCEEEECC
T ss_pred HHHHHHHHcCCCeEEEEE
Confidence 12334455666666543
No 403
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=86.86 E-value=1.4 Score=29.54 Aligned_cols=88 Identities=8% Similarity=-0.006 Sum_probs=52.5
Q ss_pred CeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--C--CCCCCccEEEEcCCC
Q psy8015 28 LDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--F--GDNGPYDAIHVGAAY 99 (165)
Q Consensus 28 ~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~--~~~~~fD~I~i~~~~ 99 (165)
++|+= +|.|.++..+++. ..+|+.+|.+++.++..+.+ . ++.++.+|..+. + .....+|.|++....
T Consensus 5 m~i~I-iG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-~---~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~ 79 (140)
T 1lss_A 5 MYIII-AGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-I---DALVINGDCTKIKTLEDAGIEDADMYIAVTGK 79 (140)
T ss_dssp CEEEE-ECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-C---SSEEEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred CEEEE-ECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh-c---CcEEEEcCCCCHHHHHHcCcccCCEEEEeeCC
Confidence 45542 6889988777654 35799999999877654311 1 356677776421 1 113468999997544
Q ss_pred CCch---HHHHhccccCcEEEEEec
Q psy8015 100 PRYP---EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 100 ~~~p---~~l~~~LkpgG~lvi~~~ 121 (165)
.... ....+.+.++ ++++...
T Consensus 80 ~~~~~~~~~~~~~~~~~-~ii~~~~ 103 (140)
T 1lss_A 80 EEVNLMSSLLAKSYGIN-KTIARIS 103 (140)
T ss_dssp HHHHHHHHHHHHHTTCC-CEEEECS
T ss_pred chHHHHHHHHHHHcCCC-EEEEEec
Confidence 3221 1334556664 6555443
No 404
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=86.42 E-value=2.3 Score=39.30 Aligned_cols=71 Identities=10% Similarity=0.043 Sum_probs=47.9
Q ss_pred CCCeEEEE-ccccHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeEEEEccCC------------C----CCCC
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR------------A----SFGD 86 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~------------~----~~~~ 86 (165)
+.-+++|+ ||.|-++.-|.+.+- .|.++|+++.+.+.-+.. ..+..++.+|.. . .++.
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N---~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~ 615 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLN---NPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQ 615 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHH---CTTSEEECSCHHHHHHHHHHTCSBCTTCCBCCC
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHh---CCCCccccccHHHHhhhccchhhhhhhhhhccc
Confidence 34589999 999999988876553 578999999998865422 234555555531 1 1333
Q ss_pred CCCccEEEEcCCC
Q psy8015 87 NGPYDAIHVGAAY 99 (165)
Q Consensus 87 ~~~fD~I~i~~~~ 99 (165)
.+.+|+|+.+..+
T Consensus 616 ~~~vDll~GGpPC 628 (1002)
T 3swr_A 616 KGDVEMLCGGPPC 628 (1002)
T ss_dssp TTTCSEEEECCCC
T ss_pred CCCeeEEEEcCCC
Confidence 4578988876543
No 405
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=86.16 E-value=1.2 Score=30.85 Aligned_cols=91 Identities=11% Similarity=-0.064 Sum_probs=56.4
Q ss_pred CeEEEEccccHHHHHHhcc----CCcEEEEeCC-HHHHHhcc-cccCCCCCeEEEEccCCCC--CC--CCCCccEEEEcC
Q psy8015 28 LDCLALTSNTKQSTTLPTF----IPNSFNINVY-YYLSGGPL-SSTIDPDHDYDLIADGRAS--FG--DNGPYDAIHVGA 97 (165)
Q Consensus 28 ~~vLei~GsG~~t~~la~~----~~~V~aiD~~-~~~~~~A~-~~~~~~~nV~~~~gD~~~~--~~--~~~~fD~I~i~~ 97 (165)
++++ |+|.|.++..+++. ..+|+.+|.+ ++..+..+ .. ..++.++.||+.+. +. .....|.|++..
T Consensus 4 ~~vl-I~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 4 DHFI-VCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp SCEE-EECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CcEE-EECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 4443 27889999877764 3589999998 45443332 11 12578999998642 11 235789998865
Q ss_pred CCCCch---HHHHhccccCcEEEEEecC
Q psy8015 98 AYPRYP---EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 98 ~~~~~p---~~l~~~LkpgG~lvi~~~~ 122 (165)
...... ....+.+.|..++++-...
T Consensus 80 ~~d~~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 80 DNDADNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp SCHHHHHHHHHHHHHHTSSSCEEEECSS
T ss_pred CChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 543222 2345666777788776654
No 406
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=86.16 E-value=2.5 Score=33.00 Aligned_cols=85 Identities=5% Similarity=-0.163 Sum_probs=54.2
Q ss_pred CCCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEE-ccCCCCCCCCCCccEEEEcCCCC
Q psy8015 26 KRLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLI-ADGRASFGDNGPYDAIHVGAAYP 100 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~-gD~~~~~~~~~~fD~I~i~~~~~ 100 (165)
++++|+=| |.|..+..+++. ..+|+.+|.+++..+.+. ..| ++... .+..+. ....|+|+.....+
T Consensus 156 ~g~~v~Ii-G~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~--~~g---~~~~~~~~l~~~---l~~aDvVi~~~p~~ 226 (300)
T 2rir_A 156 HGSQVAVL-GLGRTGMTIARTFAALGANVKVGARSSAHLARIT--EMG---LVPFHTDELKEH---VKDIDICINTIPSM 226 (300)
T ss_dssp TTSEEEEE-CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--HTT---CEEEEGGGHHHH---STTCSEEEECCSSC
T ss_pred CCCEEEEE-cccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--HCC---CeEEchhhHHHH---hhCCCEEEECCChh
Confidence 57888877 667676665553 348999999987654332 223 23222 121111 24689999987776
Q ss_pred CchHHHHhccccCcEEEEE
Q psy8015 101 RYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 101 ~~p~~l~~~LkpgG~lvi~ 119 (165)
-+.+..++.+|||+.++-.
T Consensus 227 ~i~~~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 227 ILNQTVLSSMTPKTLILDL 245 (300)
T ss_dssp CBCHHHHTTSCTTCEEEEC
T ss_pred hhCHHHHHhCCCCCEEEEE
Confidence 6667778899998765543
No 407
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.13 E-value=0.57 Score=37.97 Aligned_cols=90 Identities=11% Similarity=-0.022 Sum_probs=50.5
Q ss_pred CCCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCC-CCCccEEEEcCCCC
Q psy8015 26 KRLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGD-NGPYDAIHVGAAYP 100 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~-~~~fD~I~i~~~~~ 100 (165)
++++|+=+ |.|..+..+++. ..+|+++|.+++.++.++ +..+.. +.....+.. .+.+ ...+|+|+.+...+
T Consensus 165 ~~~~V~Vi-GaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~-~~~g~~-~~~~~~~~~-~l~~~~~~~DvVi~~~g~~ 240 (369)
T 2eez_A 165 APASVVIL-GGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLD-DVFGGR-VITLTATEA-NIKKSVQHADLLIGAVLVP 240 (369)
T ss_dssp CCCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTTTS-EEEEECCHH-HHHHHHHHCSEEEECCC--
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HhcCce-EEEecCCHH-HHHHHHhCCCEEEECCCCC
Confidence 35777766 446555444432 358999999998777653 112322 222221111 0100 13589998876543
Q ss_pred C------chHHHHhccccCcEEEEE
Q psy8015 101 R------YPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 101 ~------~p~~l~~~LkpgG~lvi~ 119 (165)
. +.+...+.+|+||+++..
T Consensus 241 ~~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 241 GAKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp -----CCSCHHHHTTSCTTCEEEEC
T ss_pred ccccchhHHHHHHHhhcCCCEEEEE
Confidence 2 356778999999987654
No 408
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=85.10 E-value=1.6 Score=34.43 Aligned_cols=83 Identities=7% Similarity=-0.104 Sum_probs=55.9
Q ss_pred ccccHHHHHHhccC---CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--C--CCCCCccEEEEcCCCCCc---h
Q psy8015 34 TSNTKQSTTLPTFI---PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--F--GDNGPYDAIHVGAAYPRY---P 103 (165)
Q Consensus 34 ~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~--~~~~~fD~I~i~~~~~~~---p 103 (165)
||.|..+..+++.. +.|+.+|.|++.++ ++. .++.++.||+.+. + ......|.+++....+.. -
T Consensus 121 ~G~G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~-----~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~ 194 (336)
T 1lnq_A 121 CGWSESTLECLRELRGSEVFVLAEDENVRKK-VLR-----SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETIHC 194 (336)
T ss_dssp ESCCHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH-----TTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHHHHHH
T ss_pred ECCcHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh-----CCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHHHHHH
Confidence 79999998888753 23999999999988 542 3578999998642 1 123578998885443211 1
Q ss_pred HHHHhccccCcEEEEEecC
Q psy8015 104 EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 104 ~~l~~~LkpgG~lvi~~~~ 122 (165)
-...+.+.|..++++-..+
T Consensus 195 ~~~ar~~~~~~~iiar~~~ 213 (336)
T 1lnq_A 195 ILGIRKIDESVRIIAEAER 213 (336)
T ss_dssp HHHHHTTCTTSEEEEECSS
T ss_pred HHHHHHHCCCCeEEEEECC
Confidence 1345677777777776543
No 409
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.72 E-value=0.69 Score=37.67 Aligned_cols=91 Identities=9% Similarity=-0.006 Sum_probs=52.0
Q ss_pred CCCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCC-CCCccEEEEcCCCC
Q psy8015 26 KRLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGD-NGPYDAIHVGAAYP 100 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~-~~~fD~I~i~~~~~ 100 (165)
++++|+=+ |.|..+..+++. ..+|+++|.+++.++.++. ..|.. +.....+.. .+.+ ...+|+|+.....+
T Consensus 167 ~g~~V~Vi-G~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~-~~g~~-~~~~~~~~~-~l~~~l~~aDvVi~~~~~p 242 (377)
T 2vhw_A 167 EPADVVVI-GAGTAGYNAARIANGMGATVTVLDINIDKLRQLDA-EFCGR-IHTRYSSAY-ELEGAVKRADLVIGAVLVP 242 (377)
T ss_dssp CCCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HTTTS-SEEEECCHH-HHHHHHHHCSEEEECCCCT
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-hcCCe-eEeccCCHH-HHHHHHcCCCEEEECCCcC
Confidence 56788777 446555444443 3489999999988776641 12321 222111110 0100 13579998865433
Q ss_pred C------chHHHHhccccCcEEEEEe
Q psy8015 101 R------YPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 101 ~------~p~~l~~~LkpgG~lvi~~ 120 (165)
. +.++.++.+||||+++-.-
T Consensus 243 ~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 243 GAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp TSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCCcceecHHHHhcCCCCcEEEEEe
Confidence 2 2567789999999876543
No 410
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=84.64 E-value=2.8 Score=34.48 Aligned_cols=88 Identities=14% Similarity=0.078 Sum_probs=50.8
Q ss_pred CCCeEEEEccccHHHHHHhc----cCCcEEEEeCCHHHHHhcccccCCCCCeEEEE----ccCCCCCC------------
Q psy8015 26 KRLDCLALTSNTKQSTTLPT----FIPNSFNINVYYYLSGGPLSSTIDPDHDYDLI----ADGRASFG------------ 85 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la~----~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~----gD~~~~~~------------ 85 (165)
++.+|+=+ |.|..+..+++ +..+|+.+|++++.++.++ .+|. +++. ++...++.
T Consensus 183 ~~~kV~Vi-G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~--~lGa---~~~~l~~~~~~~~gya~~~~~~~~~~~~ 256 (381)
T 3p2y_A 183 KPASALVL-GVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVR--SVGA---QWLDLGIDAAGEGGYARELSEAERAQQQ 256 (381)
T ss_dssp CCCEEEEE-SCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH--HTTC---EECCCC-------------CHHHHHHHH
T ss_pred CCCEEEEE-CchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HcCC---eEEeccccccccccchhhhhHHHHhhhH
Confidence 56788877 55555444443 3458999999998877664 1232 1211 11111111
Q ss_pred -----CCCCccEEEEcCCCC------CchHHHHhccccCcEEEEE
Q psy8015 86 -----DNGPYDAIHVGAAYP------RYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 86 -----~~~~fD~I~i~~~~~------~~p~~l~~~LkpgG~lvi~ 119 (165)
.....|+|+.....+ -+.++..+.+|||..+|-.
T Consensus 257 ~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 257 QALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred HHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 125789998764222 2457889999998876654
No 411
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=84.41 E-value=0.41 Score=37.86 Aligned_cols=39 Identities=28% Similarity=0.481 Sum_probs=28.0
Q ss_pred CCCCCC-CCccEEEEcCCCCC----ch---H----------HHHhccccCcEEEEEe
Q psy8015 82 ASFGDN-GPYDAIHVGAAYPR----YP---E----------IFIHHLKSGGRLVIPI 120 (165)
Q Consensus 82 ~~~~~~-~~fD~I~i~~~~~~----~p---~----------~l~~~LkpgG~lvi~~ 120 (165)
-++|.. +.||.||++...+. +- | ...+.|+|||.+++-.
T Consensus 203 lG~P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~a 259 (324)
T 3trk_A 203 LGLPATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRA 259 (324)
T ss_dssp GCCCGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEE
T ss_pred cCCCCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 355654 89999999976652 21 1 2368999999999863
No 412
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=84.22 E-value=0.73 Score=36.79 Aligned_cols=51 Identities=14% Similarity=0.032 Sum_probs=36.5
Q ss_pred eEEE-EccCCCCC--CCCCCccEEEEcCCCCCc-----------------hHHHHhccccCcEEEEEecCC
Q psy8015 73 DYDL-IADGRASF--GDNGPYDAIHVGAAYPRY-----------------PEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 73 V~~~-~gD~~~~~--~~~~~fD~I~i~~~~~~~-----------------p~~l~~~LkpgG~lvi~~~~~ 123 (165)
..++ +||+.+.+ .+.++||+||++.....- ...+.+.|+|||.+++.++..
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSC
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcc
Confidence 5677 99986422 124689999999766421 124578999999999988754
No 413
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=84.12 E-value=0.48 Score=36.42 Aligned_cols=49 Identities=12% Similarity=0.035 Sum_probs=33.5
Q ss_pred eEEEEccCCCCC--CCCCCccEEEEcCCCCCc--------------------hHHHHhccccCcEEEEEec
Q psy8015 73 DYDLIADGRASF--GDNGPYDAIHVGAAYPRY--------------------PEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 73 V~~~~gD~~~~~--~~~~~fD~I~i~~~~~~~--------------------p~~l~~~LkpgG~lvi~~~ 121 (165)
.+++++|+.+.+ .+.++||+||++.....- .+.+.+.|+|||.+++.+.
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~ 75 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNT 75 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcC
Confidence 467888875422 123689999998765321 1245789999999999853
No 414
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=83.47 E-value=3.3 Score=34.27 Aligned_cols=92 Identities=9% Similarity=-0.023 Sum_probs=50.2
Q ss_pred CCCeEEEEccccHHHHHH---hcc-CCcEEEEeCCHHHHHhcccccCCCCCeE-----EEEccCCCCCC----C------
Q psy8015 26 KRLDCLALTSNTKQSTTL---PTF-IPNSFNINVYYYLSGGPLSSTIDPDHDY-----DLIADGRASFG----D------ 86 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~l---a~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~-----~~~gD~~~~~~----~------ 86 (165)
++.+|+=+ |.|..+..+ ++. ..+|+.+|++++.++.++ .+|.+-++ +..++....+. +
T Consensus 189 ~~~kV~Vi-G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~--~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~ 265 (405)
T 4dio_A 189 PAAKIFVM-GAGVAGLQAIATARRLGAVVSATDVRPAAKEQVA--SLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ 265 (405)
T ss_dssp CCCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH--HTTCEECCCCC-----------------CHHHHHH
T ss_pred CCCEEEEE-CCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--HcCCceeecccccccccccccchhhhcchhhhhhh
Confidence 56788877 445444333 332 358999999998877664 12321000 01111111111 0
Q ss_pred -------CCCccEEEEcCCCC------CchHHHHhccccCcEEEEEe
Q psy8015 87 -------NGPYDAIHVGAAYP------RYPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 87 -------~~~fD~I~i~~~~~------~~p~~l~~~LkpgG~lvi~~ 120 (165)
....|+|+.....+ -+.++..+.+|||..+|-..
T Consensus 266 ~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 266 AALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred HhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 13679888763222 25678899999988776543
No 415
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=82.99 E-value=0.67 Score=40.25 Aligned_cols=40 Identities=20% Similarity=0.423 Sum_probs=29.5
Q ss_pred CCCCCCCCCccEEEEcCCCC----Cch---H----------HHHhccccCcEEEEEe
Q psy8015 81 RASFGDNGPYDAIHVGAAYP----RYP---E----------IFIHHLKSGGRLVIPI 120 (165)
Q Consensus 81 ~~~~~~~~~fD~I~i~~~~~----~~p---~----------~l~~~LkpgG~lvi~~ 120 (165)
..++|..++||.||++...+ ++- | ...+.|+|||.+++-.
T Consensus 213 ~lG~p~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~ 269 (670)
T 4gua_A 213 AFGFPPQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKS 269 (670)
T ss_dssp GGCCCCCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCCCCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEE
Confidence 34777778999999997655 221 1 2468999999998864
No 416
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=82.07 E-value=3 Score=30.31 Aligned_cols=60 Identities=10% Similarity=-0.166 Sum_probs=41.8
Q ss_pred ccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC-C--C-CCCCCccEEEEcCCCC
Q psy8015 34 TSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA-S--F-GDNGPYDAIHVGAAYP 100 (165)
Q Consensus 34 ~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~-~--~-~~~~~fD~I~i~~~~~ 100 (165)
-|+|+++..+++. ..+|++++++++-.+ . ..+++++.+|..+ . + .....+|+|+..++..
T Consensus 7 GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-----~--~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 7 GSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP-----Q--YNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp STTSHHHHHHHHHHTTSSCEEEEEESSGGGSC-----C--CTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEECCccchh-----h--cCCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence 5589888777764 358999999875332 1 2579999999865 1 1 1134689999887654
No 417
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=82.01 E-value=2.5 Score=34.83 Aligned_cols=70 Identities=7% Similarity=-0.055 Sum_probs=42.3
Q ss_pred EecCCchHHHHHHHHHH-----hcC-CC-CCeEEEE-ccccHHHHHHhcc-------C--CcEEEEeCCHHHHHhcc--c
Q psy8015 5 FVSGSVSGAVAKYVTYL-----SGH-SK-RLDCLAL-TSNTKQSTTLPTF-------I--PNSFNINVYYYLSGGPL--S 65 (165)
Q Consensus 5 ~~~~~~~~~~~~~l~~l-----~~~-~~-~~~vLei-~GsG~~t~~la~~-------~--~~V~aiD~~~~~~~~A~--~ 65 (165)
+||++++...+.++... ... .| .-+++|+ .|+|.++.-+.+. . -+++-||+|+.+.+.=+ +
T Consensus 52 ~Tapeis~~FGe~la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L 131 (387)
T 1zkd_A 52 TTSPEISQMFGELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLL 131 (387)
T ss_dssp CSHHHHCHHHHHHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHS
T ss_pred eCCCchHHHHHHHHHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHh
Confidence 45666666655444321 111 23 3469999 9999998655432 1 27899999998887433 3
Q ss_pred ccCCCCCeEEE
Q psy8015 66 STIDPDHDYDL 76 (165)
Q Consensus 66 ~~~~~~nV~~~ 76 (165)
+.. ++|++.
T Consensus 132 ~~~--~~v~W~ 140 (387)
T 1zkd_A 132 AGI--RNIHWH 140 (387)
T ss_dssp TTC--SSEEEE
T ss_pred cCC--CCeEEe
Confidence 332 256655
No 418
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=80.43 E-value=6.3 Score=28.23 Aligned_cols=81 Identities=10% Similarity=-0.136 Sum_probs=51.8
Q ss_pred ccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCC-CCCCccEEEEcCCCCCc------
Q psy8015 34 TSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFG-DNGPYDAIHVGAAYPRY------ 102 (165)
Q Consensus 34 ~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~-~~~~fD~I~i~~~~~~~------ 102 (165)
-|||+++..+++. ..+|++++++++-.+... .+++++.+|..+... ....+|+|+..++...-
T Consensus 7 GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~ 80 (221)
T 3ew7_A 7 GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH------KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHV 80 (221)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC------SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSHH
T ss_pred cCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc------CCCeEEeccccChhhhhhcCCCEEEECCcCCccccchHH
Confidence 4589888777764 368999999987654321 578999999764321 12468999988765421
Q ss_pred --hHHHHhcccc--CcEEEEEe
Q psy8015 103 --PEIFIHHLKS--GGRLVIPI 120 (165)
Q Consensus 103 --p~~l~~~Lkp--gG~lvi~~ 120 (165)
...+.+.++. .++++...
T Consensus 81 ~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 81 TSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp HHHHHHHHHHCSCCSSEEEEEC
T ss_pred HHHHHHHHHHHhcCCceEEEEe
Confidence 1244555554 36766643
No 419
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=80.31 E-value=6.9 Score=26.62 Aligned_cols=99 Identities=12% Similarity=-0.008 Sum_probs=55.2
Q ss_pred CchHHHHHHHHHHhcCCCCCeEEEEccccHHHHHHhccC----CcEEEEeCCHHHHHhcccccCCCCCeEEEEc-cCCCC
Q psy8015 9 SVSGAVAKYVTYLSGHSKRLDCLALTSNTKQSTTLPTFI----PNSFNINVYYYLSGGPLSSTIDPDHDYDLIA-DGRAS 83 (165)
Q Consensus 9 ~~~~~~~~~l~~l~~~~~~~~vLei~GsG~~t~~la~~~----~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~g-D~~~~ 83 (165)
|++....+.+... .+++|+=+ |+|.++..+++.. .+|+.+|++++..+... +.++ +..... +..+.
T Consensus 7 sv~~~a~~~~~~~----~~~~v~ii-G~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a-~~~~---~~~~~~~~~~~~ 77 (144)
T 3oj0_A 7 SIPSIVYDIVRKN----GGNKILLV-GNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFA-EKYE---YEYVLINDIDSL 77 (144)
T ss_dssp SHHHHHHHHHHHH----CCCEEEEE-CCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHH-HHHT---CEEEECSCHHHH
T ss_pred cHHHHHHHHHHhc----cCCEEEEE-CCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHH-HHhC---CceEeecCHHHH
Confidence 4455554554443 37888877 7788887777653 35999999998776421 1222 222221 11111
Q ss_pred CCCCCCccEEEEcCCCCCchHHHHhccccCcEEEEEec
Q psy8015 84 FGDNGPYDAIHVGAAYPRYPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 84 ~~~~~~fD~I~i~~~~~~~p~~l~~~LkpgG~lvi~~~ 121 (165)
...+|+|+.....++..-. .+.|++|+.+ +.++
T Consensus 78 ---~~~~Divi~at~~~~~~~~-~~~l~~g~~v-id~~ 110 (144)
T 3oj0_A 78 ---IKNNDVIITATSSKTPIVE-ERSLMPGKLF-IDLG 110 (144)
T ss_dssp ---HHTCSEEEECSCCSSCSBC-GGGCCTTCEE-EECC
T ss_pred ---hcCCCEEEEeCCCCCcEee-HHHcCCCCEE-EEcc
Confidence 1358999887655432211 2678886655 4444
No 420
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=79.95 E-value=5 Score=26.68 Aligned_cols=88 Identities=5% Similarity=0.006 Sum_probs=51.6
Q ss_pred CCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--CC--CCCCccEEEEcCC
Q psy8015 27 RLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--FG--DNGPYDAIHVGAA 98 (165)
Q Consensus 27 ~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~~--~~~~fD~I~i~~~ 98 (165)
+++|+= +|.|.++..+++. ..+|+.+|.+++.++.++ .. ...++.+|..+. +. ....+|+|++...
T Consensus 6 ~~~v~I-~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~--~~---~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~ 79 (144)
T 2hmt_A 6 NKQFAV-IGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYA--SY---ATHAVIANATEENELLSLGIRNFEYVIVAIG 79 (144)
T ss_dssp CCSEEE-ECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT--TT---CSEEEECCTTCHHHHHTTTGGGCSEEEECCC
T ss_pred CCcEEE-ECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--Hh---CCEEEEeCCCCHHHHHhcCCCCCCEEEECCC
Confidence 345643 5778888777654 357999999998776543 11 245677776431 11 1246899998765
Q ss_pred CC-Cch---HHHHhccccCcEEEEEec
Q psy8015 99 YP-RYP---EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 99 ~~-~~p---~~l~~~LkpgG~lvi~~~ 121 (165)
.+ +.. ....+.+.+. ++++...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~-~ii~~~~ 105 (144)
T 2hmt_A 80 ANIQASTLTTLLLKELDIP-NIWVKAQ 105 (144)
T ss_dssp SCHHHHHHHHHHHHHTTCS-EEEEECC
T ss_pred CchHHHHHHHHHHHHcCCC-eEEEEeC
Confidence 43 221 1233455664 6655443
No 421
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=79.24 E-value=8 Score=32.33 Aligned_cols=82 Identities=2% Similarity=-0.156 Sum_probs=50.8
Q ss_pred CCCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCC
Q psy8015 26 KRLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPR 101 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~ 101 (165)
.|++|+=+ |.|..+..+|+. ..+|+.+|+++.....|... |. ++ .+..+.+ ...|+|+......+
T Consensus 219 ~GktV~Vi-G~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~--G~---~v--~~Leeal---~~ADIVi~atgt~~ 287 (435)
T 3gvp_A 219 GGKQVVVC-GYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMD--GF---RL--VKLNEVI---RQVDIVITCTGNKN 287 (435)
T ss_dssp TTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--TC---EE--CCHHHHT---TTCSEEEECSSCSC
T ss_pred cCCEEEEE-eeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHc--CC---Ee--ccHHHHH---hcCCEEEECCCCcc
Confidence 57777655 777766655553 35899999999766555321 22 11 1221222 35799888644444
Q ss_pred -chHHHHhccccCcEEEE
Q psy8015 102 -YPEIFIHHLKSGGRLVI 118 (165)
Q Consensus 102 -~p~~l~~~LkpgG~lvi 118 (165)
+..+.++.+|+|++++-
T Consensus 288 lI~~e~l~~MK~gailIN 305 (435)
T 3gvp_A 288 VVTREHLDRMKNSCIVCN 305 (435)
T ss_dssp SBCHHHHHHSCTTEEEEE
T ss_pred cCCHHHHHhcCCCcEEEE
Confidence 44577899999886554
No 422
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=79.07 E-value=3.8 Score=39.02 Aligned_cols=71 Identities=10% Similarity=0.041 Sum_probs=47.1
Q ss_pred CCCeEEEE-ccccHHHHHHhccCC--cEEEEeCCHHHHHhcccccCCCCCeEEEEccCC----------------CCCCC
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTFIP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGR----------------ASFGD 86 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~----------------~~~~~ 86 (165)
+..+++|+ ||.|.++.-|.+.+- .|.++|+++.+++.-+.. .++..++.+|.. ..++.
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N---~p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~ 926 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLN---NPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQ 926 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHH---CTTSEEECSCHHHHHHHHTTTCSBCSSCCBCCC
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHh---CCCCcEeeccHHHHhHhhhccchhhhhhhhccc
Confidence 45789999 999999988876552 488999999988865422 233445554421 11233
Q ss_pred CCCccEEEEcCCC
Q psy8015 87 NGPYDAIHVGAAY 99 (165)
Q Consensus 87 ~~~fD~I~i~~~~ 99 (165)
.+.+|+|+-+..+
T Consensus 927 ~~~vDvl~GGpPC 939 (1330)
T 3av4_A 927 KGDVEMLCGGPPC 939 (1330)
T ss_dssp TTTCSEEEECCCC
T ss_pred cCccceEEecCCC
Confidence 3578988776444
No 423
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=78.85 E-value=4 Score=36.24 Aligned_cols=39 Identities=13% Similarity=0.052 Sum_probs=30.6
Q ss_pred CCCeEEEE-ccccHHHHHHhccC-------CcEEEEeCCHHHHHhcc
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPTFI-------PNSFNINVYYYLSGGPL 64 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~~~-------~~V~aiD~~~~~~~~A~ 64 (165)
+..+|+|+ ||.|-++.=|.+.+ .-+.|+|+++.+++.=+
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~ 257 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLK 257 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHH
Confidence 45689999 99999987665543 46899999999887543
No 424
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=78.78 E-value=3.8 Score=26.30 Aligned_cols=87 Identities=11% Similarity=0.053 Sum_probs=51.0
Q ss_pred CCeEEEEccccHHHHHHhcc----C-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--CC-CCCCccEEEEcCC
Q psy8015 27 RLDCLALTSNTKQSTTLPTF----I-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--FG-DNGPYDAIHVGAA 98 (165)
Q Consensus 27 ~~~vLei~GsG~~t~~la~~----~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~~-~~~~fD~I~i~~~ 98 (165)
+++|+=+ |.|+++..+++. . .+|+.+|++++-++..+ ..+++++..|..+. +. ....+|+|+....
T Consensus 5 ~~~v~I~-G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 5 RWNICVV-GAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-----RMGVATKQVDAKDEAGLAKALGGFDAVISAAP 78 (118)
T ss_dssp CEEEEEE-CCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-----TTTCEEEECCTTCHHHHHHHTTTCSEEEECSC
T ss_pred cCeEEEE-CCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-----hCCCcEEEecCCCHHHHHHHHcCCCEEEECCC
Confidence 4566644 558887666653 3 57999999998776553 12466777776431 00 1246899988764
Q ss_pred CCCchHHHHhccccCcEEEEEe
Q psy8015 99 YPRYPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 99 ~~~~p~~l~~~LkpgG~lvi~~ 120 (165)
. .....+.+..+..|.-++.+
T Consensus 79 ~-~~~~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 79 F-FLTPIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp G-GGHHHHHHHHHHTTCEEECC
T ss_pred c-hhhHHHHHHHHHhCCCEEEe
Confidence 3 33344444444445444433
No 425
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=78.63 E-value=4.8 Score=31.07 Aligned_cols=73 Identities=10% Similarity=-0.100 Sum_probs=44.6
Q ss_pred CCCeEEEE-ccc--c---HHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC----------CCC
Q psy8015 26 KRLDCLAL-TSN--T---KQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF----------GDN 87 (165)
Q Consensus 26 ~~~~vLei-~Gs--G---~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~----------~~~ 87 (165)
.++++|=. .++ | .++..|++...+|+.++.+++..+.++ .+.. .++.++..|..+.- ...
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL--GAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH--TCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 45666655 332 2 244555555678999999987655543 2222 35888999975311 012
Q ss_pred CCccEEEEcCCCC
Q psy8015 88 GPYDAIHVGAAYP 100 (165)
Q Consensus 88 ~~fD~I~i~~~~~ 100 (165)
++.|+++.+++..
T Consensus 108 g~iD~lVnnAG~~ 120 (293)
T 3grk_A 108 GKLDFLVHAIGFS 120 (293)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCccC
Confidence 5789999887653
No 426
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=78.05 E-value=6.6 Score=26.22 Aligned_cols=82 Identities=18% Similarity=0.165 Sum_probs=50.1
Q ss_pred CCCCeEEEEccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCCchH
Q psy8015 25 SKRLDCLALTSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPRYPE 104 (165)
Q Consensus 25 ~~~~~vLei~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~~p~ 104 (165)
.+..++|=+|+.|..|..|+. +|-+.|+. .|+ +++.......+.......||+|+++.-..+.-+
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~------------km~~~a~~--~gi-~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~~ 68 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLAN------------AINEGANL--TEV-RVIANSGAYGAHYDIMGVYDLIILAPQVRSYYR 68 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHH------------HHHHHHHH--HTC-SEEEEEEETTSCTTTGGGCSEEEECGGGGGGHH
T ss_pred ccCceEEEECCCCCCHHHHHH------------HHHHHHHH--CCC-ceEEEEcchHHHHhhccCCCEEEEChHHHHHHH
Confidence 455678855999988888864 34444432 244 345443222121112246999999887777778
Q ss_pred HHHhccccCcEEEEEec
Q psy8015 105 IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 105 ~l~~~LkpgG~lvi~~~ 121 (165)
++.+...+.|+=|..++
T Consensus 69 ~ik~~~~~~~ipV~vI~ 85 (108)
T 3nbm_A 69 EMKVDAERLGIQIVATR 85 (108)
T ss_dssp HHHHHHTTTTCEEEECC
T ss_pred HHHHHhhhcCCcEEEeC
Confidence 88777777777666553
No 427
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=77.44 E-value=2.2 Score=34.76 Aligned_cols=100 Identities=14% Similarity=-0.029 Sum_probs=61.4
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGP 89 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~ 89 (165)
+.....+++.+.. -+.+||.+ -+-|+++..++.. .+|+.+.-+.-..+. ++..|++. +. .+..+ .....
T Consensus 32 ~~~~~~l~~~~~~--~~~~~l~~n~~~g~~~~~~~~~-~~~~~~~~~~~~~~~--l~~~~~~~-~~--~~~~~--~~~~~ 101 (381)
T 3dmg_A 32 DPVHDLLQKTVEP--FGERALDLNPGVGWGSLPLEGR-MAVERLETSRAAFRC--LTASGLQA-RL--ALPWE--AAAGA 101 (381)
T ss_dssp CHHHHHHHTTCCC--CSSEEEESSCTTSTTTGGGBTT-BEEEEEECBHHHHHH--HHHTTCCC-EE--CCGGG--SCTTC
T ss_pred ChHHHHHHHHHHH--hCCcEEEecCCCCccccccCCC-CceEEEeCcHHHHHH--HHHcCCCc-cc--cCCcc--CCcCC
Confidence 3455566666643 46799999 9999988888632 668887544433332 44445542 22 22111 12367
Q ss_pred ccEEEEcCCCCC-------chHHHHhccccCcEEEEEe
Q psy8015 90 YDAIHVGAAYPR-------YPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 90 fD~I~i~~~~~~-------~p~~l~~~LkpgG~lvi~~ 120 (165)
||.|++-...+. ....+.+.|+|||++++.-
T Consensus 102 ~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 102 YDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp EEEEEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 999998666432 1124568899999998864
No 428
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=77.22 E-value=2.4 Score=35.43 Aligned_cols=59 Identities=5% Similarity=-0.148 Sum_probs=43.0
Q ss_pred ccccHHHHHHhccC----CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--C--CCCCCccEEEEc
Q psy8015 34 TSNTKQSTTLPTFI----PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--F--GDNGPYDAIHVG 96 (165)
Q Consensus 34 ~GsG~~t~~la~~~----~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~--~~~~~fD~I~i~ 96 (165)
||.|-++..+|+.. ..|+.+|.+++.++.++. ++ ++..++||+... + ..-...|+++..
T Consensus 9 ~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~-~~---~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 9 LGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQD-KY---DLRVVNGHASHPDVLHEAGAQDADMLVAV 75 (461)
T ss_dssp ECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHH-HS---SCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-hc---CcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence 89999998888753 469999999999986642 22 478899998642 1 123568988764
No 429
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=77.18 E-value=8 Score=28.29 Aligned_cols=70 Identities=13% Similarity=0.004 Sum_probs=47.1
Q ss_pred CCCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCe-EEEEccCCCCCC-CCCCccEEEEcCCC
Q psy8015 26 KRLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHD-YDLIADGRASFG-DNGPYDAIHVGAAY 99 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV-~~~~gD~~~~~~-~~~~fD~I~i~~~~ 99 (165)
.+++||=.-|+|+++..+++. ..+|++++++++-.+... . .++ +++.+|..+.+. ..+..|+|+..++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~--~---~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR--E---RGASDIVVANLEEDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH--H---TTCSEEEECCTTSCCGGGGTTCSEEEECCCC
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH--h---CCCceEEEcccHHHHHHHHcCCCEEEECCCC
Confidence 467776336678888777764 368999999987655332 1 257 889999762222 13578999988775
Q ss_pred C
Q psy8015 100 P 100 (165)
Q Consensus 100 ~ 100 (165)
.
T Consensus 95 ~ 95 (236)
T 3e8x_A 95 G 95 (236)
T ss_dssp C
T ss_pred C
Confidence 4
No 430
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=77.13 E-value=5.2 Score=30.44 Aligned_cols=73 Identities=8% Similarity=-0.139 Sum_probs=48.7
Q ss_pred CCeEEEE-ccccHHHHHHhc----cCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCC-C------C----CCC
Q psy8015 27 RLDCLAL-TSNTKQSTTLPT----FIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRAS-F------G----DNG 88 (165)
Q Consensus 27 ~~~vLei-~GsG~~t~~la~----~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~-~------~----~~~ 88 (165)
++++| | -|+|.++..+++ ...+|+.++++++-.+.+. ++..+..++.++..|..+. - . ..+
T Consensus 12 ~k~vl-ITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g 90 (311)
T 3o26_A 12 RRCAV-VTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG 90 (311)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CcEEE-EecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence 45555 5 555666555554 4568999999998776653 4444556799999998653 0 0 014
Q ss_pred CccEEEEcCCCC
Q psy8015 89 PYDAIHVGAAYP 100 (165)
Q Consensus 89 ~fD~I~i~~~~~ 100 (165)
+.|+++.+++..
T Consensus 91 ~iD~lv~nAg~~ 102 (311)
T 3o26_A 91 KLDILVNNAGVA 102 (311)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCccc
Confidence 799999988753
No 431
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=76.42 E-value=5.8 Score=31.31 Aligned_cols=94 Identities=5% Similarity=-0.133 Sum_probs=55.5
Q ss_pred CCeEEEE--ccccHH--HHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCC-C
Q psy8015 27 RLDCLAL--TSNTKQ--STTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYP-R 101 (165)
Q Consensus 27 ~~~vLei--~GsG~~--t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~-~ 101 (165)
.++|.=| .|+|-. +..|.+...+|++.|..+.--...++++. ++++..|.-.+.+.. ..+|.|+.+.+.+ +
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~---gi~v~~g~~~~~l~~-~~~d~vV~Spgi~~~ 79 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEAL---GIDVYEGFDAAQLDE-FKADVYVIGNVAKRG 79 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHT---TCEEEESCCGGGGGS-CCCSEEEECTTCCTT
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhC---CCEEECCCCHHHcCC-CCCCEEEECCCcCCC
Confidence 3567777 688874 45666778899999986531111224443 356666532222210 2589999987765 3
Q ss_pred chH---------------H-HHhccccCcEEEEEecCCC
Q psy8015 102 YPE---------------I-FIHHLKSGGRLVIPIGDTK 124 (165)
Q Consensus 102 ~p~---------------~-l~~~LkpgG~lvi~~~~~~ 124 (165)
-|+ + +.+.+..+..++.+.|+.+
T Consensus 80 ~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnG 118 (326)
T 3eag_A 80 MDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHG 118 (326)
T ss_dssp CHHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSC
T ss_pred CHHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCC
Confidence 332 2 2333555677888877654
No 432
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=76.32 E-value=0.29 Score=39.70 Aligned_cols=89 Identities=8% Similarity=-0.117 Sum_probs=53.2
Q ss_pred CCCCeEEEE-ccccHHH---HHHhcc-CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC---CCC---CCCCccEE
Q psy8015 25 SKRLDCLAL-TSNTKQS---TTLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA---SFG---DNGPYDAI 93 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t---~~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~---~~~---~~~~fD~I 93 (165)
.++++||=+ .|+|.++ ..+|+. ..+|++++.+++-.+.++ ++|.+.+ +..+..+ ... ....+|++
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~--~lGa~~~--~~~~~~~~~~~v~~~t~~~g~d~v 244 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK--AQGAVHV--CNAASPTFMQDLTEALVSTGATIA 244 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH--HTTCSCE--EETTSTTHHHHHHHHHHHHCCCEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--hCCCcEE--EeCCChHHHHHHHHHhcCCCceEE
Confidence 578999876 5777555 444443 348999999999888775 3565432 2211110 000 01259988
Q ss_pred EEcCCCCCchHHHHhcc-----ccCcEEE
Q psy8015 94 HVGAAYPRYPEIFIHHL-----KSGGRLV 117 (165)
Q Consensus 94 ~i~~~~~~~p~~l~~~L-----kpgG~lv 117 (165)
|-....+...+.+.+.| +++|+++
T Consensus 245 ~d~~g~~~~~~~~~~~l~~~~~r~~G~~~ 273 (379)
T 3iup_A 245 FDATGGGKLGGQILTCMEAALNKSAREYS 273 (379)
T ss_dssp EESCEEESHHHHHHHHHHHHHHTTCCSCC
T ss_pred EECCCchhhHHHHHHhcchhhhcccccee
Confidence 87666556656666666 4565443
No 433
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=76.01 E-value=5.8 Score=33.61 Aligned_cols=95 Identities=9% Similarity=-0.052 Sum_probs=57.7
Q ss_pred CCCCeEEEE--ccccHH--HHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCC
Q psy8015 25 SKRLDCLAL--TSNTKQ--STTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYP 100 (165)
Q Consensus 25 ~~~~~vLei--~GsG~~--t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~ 100 (165)
.+.++|.=| +|+|-. +..|.+...+|++.|..+.--...+++..| +++..|.-...+. ..+|.|+.+.+.+
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~g---i~~~~G~~~~~~~--~~~d~vV~Spgi~ 91 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAG---VTIEEGYLIAHLQ--PAPDLVVVGNAMK 91 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTT---CEEEESCCGGGGC--SCCSEEEECTTCC
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCC---CEEECCCCHHHcC--CCCCEEEECCCcC
Confidence 456888888 888864 555666778999999864211112344433 5777764332222 3589999988765
Q ss_pred -CchH---------------HH-HhccccCcEEEEEecCCC
Q psy8015 101 -RYPE---------------IF-IHHLKSGGRLVIPIGDTK 124 (165)
Q Consensus 101 -~~p~---------------~l-~~~LkpgG~lvi~~~~~~ 124 (165)
.-|+ ++ .+.+.++..++.+.|+.+
T Consensus 92 ~~~p~l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnG 132 (524)
T 3hn7_A 92 RGMDVIEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHG 132 (524)
T ss_dssp TTSHHHHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSC
T ss_pred CCCHHHHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCC
Confidence 3332 23 344555667888887654
No 434
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=74.59 E-value=1.3 Score=36.99 Aligned_cols=58 Identities=14% Similarity=0.080 Sum_probs=39.8
Q ss_pred EecCCchHHHHHHHH-----HHhcCCCCCeEEEE-ccccHHHHHHhccC-------CcEEEEeCCHHHHHhc
Q psy8015 5 FVSGSVSGAVAKYVT-----YLSGHSKRLDCLAL-TSNTKQSTTLPTFI-------PNSFNINVYYYLSGGP 63 (165)
Q Consensus 5 ~~~~~~~~~~~~~l~-----~l~~~~~~~~vLei-~GsG~~t~~la~~~-------~~V~aiD~~~~~~~~A 63 (165)
+||+++|...+.++. ++.. ...-+++|+ .|+|.++.-+.+.. .+++-||+|+.+.+.=
T Consensus 112 iTAPeiS~~FGe~la~~~~~~~~~-~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q 182 (432)
T 4f3n_A 112 VTAPELSPLFAQTLARPVAQALDA-SGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQ 182 (432)
T ss_dssp SSCGGGHHHHHHHHHHHHHHHHHH-HTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHH
T ss_pred cCchhhhHHHHHHHHHHHHHHHHh-cCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHH
Confidence 577888776654442 2222 224799999 99999886654321 3799999999987654
No 435
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=72.90 E-value=14 Score=27.74 Aligned_cols=73 Identities=11% Similarity=0.006 Sum_probs=43.8
Q ss_pred CCCeEEEEccccHHHHHHh----ccCCcEEEEeCC------------HHHHHhcc--cccCCCCCeEEEEccCCCCCC--
Q psy8015 26 KRLDCLALTSNTKQSTTLP----TFIPNSFNINVY------------YYLSGGPL--SSTIDPDHDYDLIADGRASFG-- 85 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la----~~~~~V~aiD~~------------~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~-- 85 (165)
.++++|=.-|+|.++..++ +...+|+.+|++ .+.++.+. ++..+ .++.++..|..+.-.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~ 87 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-RKAYTAEVDVRDRAAVS 87 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-SCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC-CceEEEEccCCCHHHHH
Confidence 3566664444555554444 445689999987 44444432 33333 468999999754210
Q ss_pred --------CCCCccEEEEcCCC
Q psy8015 86 --------DNGPYDAIHVGAAY 99 (165)
Q Consensus 86 --------~~~~fD~I~i~~~~ 99 (165)
..++.|+++.+++.
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~ 109 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGI 109 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCc
Confidence 01478999988765
No 436
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=72.89 E-value=3.1 Score=33.78 Aligned_cols=92 Identities=13% Similarity=-0.013 Sum_probs=49.4
Q ss_pred CCCeEEEEccccHHHH---HHhcc-CCcEEEEeCCHHHHHhcccccCCCCCe--EEEE------ccCCC-C---------
Q psy8015 26 KRLDCLALTSNTKQST---TLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHD--YDLI------ADGRA-S--------- 83 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~---~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV--~~~~------gD~~~-~--------- 83 (165)
++.+|+=+ |.|..+. .+++. ..+|+.+|.+++..+.++ .+|..-+ .... .+++. .
T Consensus 171 ~g~~V~Vi-GaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~--~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~ 247 (384)
T 1l7d_A 171 PPARVLVF-GVGVAGLQAIATAKRLGAVVMATDVRAATKEQVE--SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ 247 (384)
T ss_dssp CCCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH--HTTCEECCC-----------------------CCH
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HcCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence 57888877 4455443 33333 347999999987776653 2332111 0100 00000 0
Q ss_pred ---CCC-CCCccEEEEcCCC-----CC-chHHHHhccccCcEEEEEe
Q psy8015 84 ---FGD-NGPYDAIHVGAAY-----PR-YPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 84 ---~~~-~~~fD~I~i~~~~-----~~-~p~~l~~~LkpgG~lvi~~ 120 (165)
+.+ ...+|+|+..... +. +.++.++.+||||+++-.-
T Consensus 248 ~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 248 AEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp HHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 100 1358999866522 12 3467789999999876543
No 437
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=71.83 E-value=6.8 Score=29.45 Aligned_cols=73 Identities=8% Similarity=-0.074 Sum_probs=45.2
Q ss_pred CCCeEEEEccccHHHHHHh----ccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCC----------CCCCcc
Q psy8015 26 KRLDCLALTSNTKQSTTLP----TFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFG----------DNGPYD 91 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la----~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~----------~~~~fD 91 (165)
.++++|=.-|+|.++..++ +...+|+.++++++.++.... .++ .++.++..|..+.-. ..++.|
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIRE-EFG-PRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHG-GGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhC-CcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 4566664444555554444 445689999999987765531 112 368889999754210 114789
Q ss_pred EEEEcCCCC
Q psy8015 92 AIHVGAAYP 100 (165)
Q Consensus 92 ~I~i~~~~~ 100 (165)
.++.+++..
T Consensus 85 ~lv~nAg~~ 93 (255)
T 4eso_A 85 LLHINAGVS 93 (255)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 998887653
No 438
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=71.36 E-value=2.9 Score=34.52 Aligned_cols=37 Identities=8% Similarity=-0.106 Sum_probs=30.4
Q ss_pred CCeEEEE-ccccHHHHHHhccC---Cc----EEEEeCCHHHHHhc
Q psy8015 27 RLDCLAL-TSNTKQSTTLPTFI---PN----SFNINVYYYLSGGP 63 (165)
Q Consensus 27 ~~~vLei-~GsG~~t~~la~~~---~~----V~aiD~~~~~~~~A 63 (165)
.-+|+|+ ||.|.++.-|-+.+ .- |.++|+++.+.+.-
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty 54 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSY 54 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHH
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHH
Confidence 4689999 99999998887755 23 89999999988754
No 439
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=71.29 E-value=12 Score=31.37 Aligned_cols=93 Identities=8% Similarity=-0.077 Sum_probs=55.8
Q ss_pred CCCCeEEEE--ccccHH--HHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCC
Q psy8015 25 SKRLDCLAL--TSNTKQ--STTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYP 100 (165)
Q Consensus 25 ~~~~~vLei--~GsG~~--t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~ 100 (165)
...++|+=| +|+|.. +..|.+...+|++.|..+.-. ..+++..| +++..|...+.+ ..+|.|+.+.+.+
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~-~~~l~~~g---i~~~~g~~~~~~---~~~d~vV~Spgi~ 92 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSV-TQHLTALG---AQIYFHHRPENV---LDASVVVVSTAIS 92 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHH-HHHHHHTT---CEEESSCCGGGG---TTCSEEEECTTSC
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHH-HHHHHHCC---CEEECCCCHHHc---CCCCEEEECCCCC
Confidence 345789988 889974 666777788999999765422 12344444 566666332222 3589999987765
Q ss_pred -CchH---------------HHHhccccCcEEEEEecCCC
Q psy8015 101 -RYPE---------------IFIHHLKSGGRLVIPIGDTK 124 (165)
Q Consensus 101 -~~p~---------------~l~~~LkpgG~lvi~~~~~~ 124 (165)
.-|+ +++..+..+.+++.+.|+.+
T Consensus 93 ~~~p~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnG 132 (494)
T 4hv4_A 93 ADNPEIVAAREARIPVIRRAEMLAELMRYRHGIAVAGTHG 132 (494)
T ss_dssp TTCHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEECSSS
T ss_pred CCCHHHHHHHHCCCCEEcHHHHHHHHhcCCCEEEEecCCC
Confidence 2221 23333334456777777654
No 440
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=71.08 E-value=32 Score=29.09 Aligned_cols=82 Identities=2% Similarity=-0.168 Sum_probs=49.2
Q ss_pred CCCeEEEEccccHHHHHHhc----cCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCC
Q psy8015 26 KRLDCLALTSNTKQSTTLPT----FIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPR 101 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la~----~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~ 101 (165)
.|++|+=+ |.|..+..+|+ ...+|+.+|+++...+.+... +. + ..+..+. ....|+++.......
T Consensus 264 ~GKtVvVt-GaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~--g~---d--v~~lee~---~~~aDvVi~atG~~~ 332 (488)
T 3ond_A 264 AGKVAVVA-GYGDVGKGCAAALKQAGARVIVTEIDPICALQATME--GL---Q--VLTLEDV---VSEADIFVTTTGNKD 332 (488)
T ss_dssp TTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--TC---E--ECCGGGT---TTTCSEEEECSSCSC
T ss_pred cCCEEEEE-CCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHh--CC---c--cCCHHHH---HHhcCEEEeCCCChh
Confidence 56777655 55555444443 346899999999877665422 21 1 1222221 235898887655444
Q ss_pred -chHHHHhccccCcEEEE
Q psy8015 102 -YPEIFIHHLKSGGRLVI 118 (165)
Q Consensus 102 -~p~~l~~~LkpgG~lvi 118 (165)
+..+.++.+++|++++-
T Consensus 333 vl~~e~l~~mk~gaiVvN 350 (488)
T 3ond_A 333 IIMLDHMKKMKNNAIVCN 350 (488)
T ss_dssp SBCHHHHTTSCTTEEEEE
T ss_pred hhhHHHHHhcCCCeEEEE
Confidence 44557899999887654
No 441
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=70.35 E-value=2.4 Score=34.78 Aligned_cols=89 Identities=11% Similarity=0.013 Sum_probs=50.1
Q ss_pred CCCeEEEEccccHHH---HHHhcc-CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccC---------C-----C-----
Q psy8015 26 KRLDCLALTSNTKQS---TTLPTF-IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADG---------R-----A----- 82 (165)
Q Consensus 26 ~~~~vLei~GsG~~t---~~la~~-~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~---------~-----~----- 82 (165)
++.+|+=+ |.|..+ +.+++. ..+|+++|.+++..+.++ .+|. +++.-|. + .
T Consensus 171 ~g~~V~Vi-GaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~--~lGa---~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 244 (401)
T 1x13_A 171 PPAKVMVI-GAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ--SMGA---EFLELDFKEEAGSGDGYAKVMSDAFIKA 244 (401)
T ss_dssp CCCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH--HTTC---EECCC--------CCHHHHHHSHHHHHH
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--HcCC---EEEEecccccccccccchhhccHHHHHH
Confidence 46788766 455444 333333 348999999998877663 2332 2211010 0 0
Q ss_pred ---CCCC-CCCccEEEEcCCCC-----C-chHHHHhccccCcEEEEEe
Q psy8015 83 ---SFGD-NGPYDAIHVGAAYP-----R-YPEIFIHHLKSGGRLVIPI 120 (165)
Q Consensus 83 ---~~~~-~~~fD~I~i~~~~~-----~-~p~~l~~~LkpgG~lvi~~ 120 (165)
.+.+ ....|+|+.....+ . +.++.++.+||||+++-.-
T Consensus 245 ~~~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 245 EMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 0111 12479998773221 3 4467789999999877643
No 442
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=70.06 E-value=16 Score=27.95 Aligned_cols=74 Identities=5% Similarity=-0.199 Sum_probs=47.3
Q ss_pred CCCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcc--ccc-CCCCCeEEE-EccCCCC--CCC-CCCccEEE
Q psy8015 26 KRLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPL--SST-IDPDHDYDL-IADGRAS--FGD-NGPYDAIH 94 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~--~~~-~~~~nV~~~-~gD~~~~--~~~-~~~fD~I~ 94 (165)
++++||=.-|+|+++..+++. ..+|++++++++-.+... ++. .+ .+++++ .+|..+. +.. ...+|+|+
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP-GRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST-TTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCC-CceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 466776336779998877763 358999999887554332 111 12 468888 7887542 111 23689999
Q ss_pred EcCCCC
Q psy8015 95 VGAAYP 100 (165)
Q Consensus 95 i~~~~~ 100 (165)
..++..
T Consensus 89 h~A~~~ 94 (342)
T 1y1p_A 89 HIASVV 94 (342)
T ss_dssp ECCCCC
T ss_pred EeCCCC
Confidence 887654
No 443
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=69.06 E-value=3.1 Score=34.91 Aligned_cols=31 Identities=3% Similarity=-0.180 Sum_probs=24.7
Q ss_pred ccccHHHHH----HhccCCcEEEEeCCHHHHHhcc
Q psy8015 34 TSNTKQSTT----LPTFIPNSFNINVYYYLSGGPL 64 (165)
Q Consensus 34 ~GsG~~t~~----la~~~~~V~aiD~~~~~~~~A~ 64 (165)
-|.||++.. ||+...+|+++|+|++.++.-+
T Consensus 27 iGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln 61 (444)
T 3vtf_A 27 LGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLR 61 (444)
T ss_dssp ECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH
T ss_pred EccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence 799998754 4455679999999999888664
No 444
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=68.56 E-value=8.2 Score=29.71 Aligned_cols=72 Identities=7% Similarity=-0.009 Sum_probs=43.4
Q ss_pred CCeEEEE-ccc--c---HHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC----------CCC
Q psy8015 27 RLDCLAL-TSN--T---KQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG----------DNG 88 (165)
Q Consensus 27 ~~~vLei-~Gs--G---~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~----------~~~ 88 (165)
++++|=. .++ | .++..|++...+|+.++++++..+.++ .+.. .++.++..|..+.-. ..+
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL--GVKLTVPCDVSDAESVDNMFKVLAEEWG 107 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH--TCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4566655 321 2 244555556678999999987655443 2222 246888899753110 114
Q ss_pred CccEEEEcCCCC
Q psy8015 89 PYDAIHVGAAYP 100 (165)
Q Consensus 89 ~fD~I~i~~~~~ 100 (165)
+.|.++.+++..
T Consensus 108 ~iD~lVnnAG~~ 119 (296)
T 3k31_A 108 SLDFVVHAVAFS 119 (296)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 789999887653
No 445
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=68.40 E-value=11 Score=29.57 Aligned_cols=75 Identities=9% Similarity=-0.107 Sum_probs=49.0
Q ss_pred CCCeEEEE-ccccHHHHHHhc----c-CC-cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCC--C-CCCCccEEEE
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPT----F-IP-NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASF--G-DNGPYDAIHV 95 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~----~-~~-~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~--~-~~~~fD~I~i 95 (165)
.+++|| | -|+|+++..+++ . .. +|+++++++.-.+..+. .+...+++++.+|..+.- . ....+|+||.
T Consensus 20 ~~k~vl-VTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih 97 (344)
T 2gn4_A 20 DNQTIL-ITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAM-EFNDPRMRFFIGDVRDLERLNYALEGVDICIH 97 (344)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHH-HHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHH-HhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence 456776 5 778988877765 3 33 89999999876543321 111247999999976421 0 1236899999
Q ss_pred cCCCCCc
Q psy8015 96 GAAYPRY 102 (165)
Q Consensus 96 ~~~~~~~ 102 (165)
.++....
T Consensus 98 ~Aa~~~~ 104 (344)
T 2gn4_A 98 AAALKHV 104 (344)
T ss_dssp CCCCCCH
T ss_pred CCCCCCC
Confidence 8877653
No 446
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=68.15 E-value=20 Score=27.67 Aligned_cols=72 Identities=11% Similarity=-0.093 Sum_probs=45.4
Q ss_pred CCCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhccccc-CCCCCeEEEEccCCCCCCCCCCccEEEEcCCCC
Q psy8015 26 KRLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSST-IDPDHDYDLIADGRASFGDNGPYDAIHVGAAYP 100 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~-~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~ 100 (165)
++++||=.-|+|+++..+++. ..+|++++.++.-... +++. .+..+++++.+|..+.. ...+|+|+..++..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~--~~~~d~vih~A~~~ 102 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR-NVEHWIGHENFELINHDVVEPL--YIEVDQIYHLASPA 102 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-GTGGGTTCTTEEEEECCTTSCC--CCCCSEEEECCSCC
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchh-hhhhhccCCceEEEeCccCChh--hcCCCEEEECcccc
Confidence 356776337789998877763 3589999986432111 1111 12357899999976532 34689999877654
No 447
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=67.60 E-value=11 Score=29.11 Aligned_cols=85 Identities=12% Similarity=0.026 Sum_probs=47.5
Q ss_pred CeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCCch
Q psy8015 28 LDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPRYP 103 (165)
Q Consensus 28 ~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~~p 103 (165)
.+|.=| |.|.++..++.. ..+|+.+|++++.++.++. .|.. ....|..+.. ...|+|++.-..+...
T Consensus 8 ~~I~iI-G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~--~g~~---~~~~~~~e~~---~~aDvvi~~vp~~~~~ 78 (303)
T 3g0o_A 8 FHVGIV-GLGSMGMGAARSCLRAGLSTWGADLNPQACANLLA--EGAC---GAAASAREFA---GVVDALVILVVNAAQV 78 (303)
T ss_dssp CEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH--TTCS---EEESSSTTTT---TTCSEEEECCSSHHHH
T ss_pred CeEEEE-CCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--cCCc---cccCCHHHHH---hcCCEEEEECCCHHHH
Confidence 455555 888888766653 3589999999988876542 2321 1123322221 3579998865443222
Q ss_pred HHH-------HhccccCcEEEEEecC
Q psy8015 104 EIF-------IHHLKSGGRLVIPIGD 122 (165)
Q Consensus 104 ~~l-------~~~LkpgG~lvi~~~~ 122 (165)
+.+ .+.|+||. +++.+.+
T Consensus 79 ~~v~~~~~~l~~~l~~g~-ivv~~st 103 (303)
T 3g0o_A 79 RQVLFGEDGVAHLMKPGS-AVMVSST 103 (303)
T ss_dssp HHHHC--CCCGGGSCTTC-EEEECSC
T ss_pred HHHHhChhhHHhhCCCCC-EEEecCC
Confidence 222 34556644 4555543
No 448
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=67.47 E-value=29 Score=26.07 Aligned_cols=90 Identities=12% Similarity=-0.105 Sum_probs=54.2
Q ss_pred CCCCeEEEEccccHHHHHHhc----cCCcEEEEe--CCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCC
Q psy8015 25 SKRLDCLALTSNTKQSTTLPT----FIPNSFNIN--VYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAA 98 (165)
Q Consensus 25 ~~~~~vLei~GsG~~t~~la~----~~~~V~aiD--~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~ 98 (165)
-.+++||=| |.|..+...++ ...+|+-++ .++++.+.+. ..+++++.++-... ....+|.|+....
T Consensus 29 L~gk~VLVV-GgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~-----~~~i~~i~~~~~~~--dL~~adLVIaAT~ 100 (223)
T 3dfz_A 29 LKGRSVLVV-GGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEA-----KGQLRVKRKKVGEE--DLLNVFFIVVATN 100 (223)
T ss_dssp CTTCCEEEE-CCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHH-----TTSCEEECSCCCGG--GSSSCSEEEECCC
T ss_pred cCCCEEEEE-CCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH-----cCCcEEEECCCCHh--HhCCCCEEEECCC
Confidence 368899877 77777765444 345777775 4455444432 12577776654322 2356999998777
Q ss_pred CCCchHHHHhccccCcEEEEEecCC
Q psy8015 99 YPRYPEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 99 ~~~~p~~l~~~LkpgG~lvi~~~~~ 123 (165)
.+.+-..+...-+ -|++|-.+..+
T Consensus 101 d~~~N~~I~~~ak-~gi~VNvvD~p 124 (223)
T 3dfz_A 101 DQAVNKFVKQHIK-NDQLVNMASSF 124 (223)
T ss_dssp CTHHHHHHHHHSC-TTCEEEC----
T ss_pred CHHHHHHHHHHHh-CCCEEEEeCCc
Confidence 7666666666656 78887766553
No 449
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=66.51 E-value=20 Score=29.86 Aligned_cols=69 Identities=6% Similarity=-0.058 Sum_probs=48.3
Q ss_pred CCCCeEEEEccccHHHHHHhccC---CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--CC--CCCCccEEEEcC
Q psy8015 25 SKRLDCLALTSNTKQSTTLPTFI---PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--FG--DNGPYDAIHVGA 97 (165)
Q Consensus 25 ~~~~~vLei~GsG~~t~~la~~~---~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~~--~~~~fD~I~i~~ 97 (165)
++-++|+= .|.|..+..+|+.. .+|.-+|.+++.++....+ +++..+++||+.+. +. .-+..|+++...
T Consensus 233 ~~~~~v~I-~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~---l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T 308 (461)
T 4g65_A 233 KPYRRIMI-VGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEE---LENTIVFCGDAADQELLTEENIDQVDVFIALT 308 (461)
T ss_dssp SCCCEEEE-ECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHH---CTTSEEEESCTTCHHHHHHTTGGGCSEEEECC
T ss_pred ccccEEEE-EcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHH---CCCceEEeccccchhhHhhcCchhhcEEEEcc
Confidence 34566654 58788887777653 5799999999998876422 46789999999751 11 135789888753
No 450
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=66.31 E-value=6.8 Score=39.65 Aligned_cols=94 Identities=10% Similarity=-0.053 Sum_probs=56.3
Q ss_pred CCCCCeEEEEccc---cHHHHHHhccC-CcEEEEeCCHHHHHhccc--ccCCCCCeEEEEccC--CC---CCCCCCCccE
Q psy8015 24 HSKRLDCLALTSN---TKQSTTLPTFI-PNSFNINVYYYLSGGPLS--STIDPDHDYDLIADG--RA---SFGDNGPYDA 92 (165)
Q Consensus 24 ~~~~~~vLei~Gs---G~~t~~la~~~-~~V~aiD~~~~~~~~A~~--~~~~~~nV~~~~gD~--~~---~~~~~~~fD~ 92 (165)
.++|++||=..|+ |..+..+|+.. .+|++++.+++-.+.++. ..+|.+.+- -..+. .+ .......+|+
T Consensus 1665 l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~-~~~~~~~~~~i~~~t~g~GvDv 1743 (2512)
T 2vz8_A 1665 MQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFA-NSRDTSFEQHVLRHTAGKGVDL 1743 (2512)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEE-ESSSSHHHHHHHHTTTSCCEEE
T ss_pred CCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEe-cCCCHHHHHHHHHhcCCCCceE
Confidence 4789999965444 45555666654 489999999887776652 124443321 11111 00 1112235998
Q ss_pred EEEcCCCCCchHHHHhccccCcEEEEE
Q psy8015 93 IHVGAAYPRYPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 93 I~i~~~~~~~p~~l~~~LkpgG~lvi~ 119 (165)
|+-..+ ....+..++.|+++|+++..
T Consensus 1744 Vld~~g-~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1744 VLNSLA-EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp EEECCC-HHHHHHHHTTEEEEEEEEEC
T ss_pred EEECCC-chHHHHHHHhcCCCcEEEEe
Confidence 876543 33445667999999998764
No 451
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=65.77 E-value=25 Score=29.62 Aligned_cols=85 Identities=6% Similarity=-0.194 Sum_probs=51.9
Q ss_pred CCCCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCC
Q psy8015 25 SKRLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYP 100 (165)
Q Consensus 25 ~~~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~ 100 (165)
-.|++|+=+ |.|..+..+|+. .-+|+..|+++.....|.. .|. ++. +..+.+ ...|+|+......
T Consensus 245 L~GKTVgVI-G~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~--~G~---~vv--~LeElL---~~ADIVv~atgt~ 313 (464)
T 3n58_A 245 MAGKVAVVC-GYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAM--DGF---EVV--TLDDAA---STADIVVTTTGNK 313 (464)
T ss_dssp CTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH--TTC---EEC--CHHHHG---GGCSEEEECCSSS
T ss_pred ccCCEEEEE-CcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHh--cCc---eec--cHHHHH---hhCCEEEECCCCc
Confidence 357777655 666666655553 3589999999976554431 122 221 211212 2579888765544
Q ss_pred Cc-hHHHHhccccCcEEEEEec
Q psy8015 101 RY-PEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 101 ~~-p~~l~~~LkpgG~lvi~~~ 121 (165)
++ ..+.++.+|+|++++ +++
T Consensus 314 ~lI~~e~l~~MK~GAILI-NvG 334 (464)
T 3n58_A 314 DVITIDHMRKMKDMCIVG-NIG 334 (464)
T ss_dssp SSBCHHHHHHSCTTEEEE-ECS
T ss_pred cccCHHHHhcCCCCeEEE-EcC
Confidence 44 467789999988765 444
No 452
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=65.07 E-value=3.8 Score=31.03 Aligned_cols=61 Identities=13% Similarity=-0.021 Sum_probs=40.7
Q ss_pred CeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--CCC--CCCccEEEEcCC
Q psy8015 28 LDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--FGD--NGPYDAIHVGAA 98 (165)
Q Consensus 28 ~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~~~--~~~fD~I~i~~~ 98 (165)
++|| |||+|+++..+++. ..+|++++++++-+ ..+++++.+|..+. +.. .+.+|+|+..++
T Consensus 4 ~~il-VtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 4 SKIL-IAGCGDLGLELARRLTAQGHEVTGLRRSAQPM---------PAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCEE-EECCSHHHHHHHHHHHHTTCCEEEEECTTSCC---------CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CcEE-EECCCHHHHHHHHHHHHCCCEEEEEeCCcccc---------ccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 4554 36889999887764 35899999875421 14688899987542 111 135999988654
No 453
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=64.77 E-value=19 Score=23.88 Aligned_cols=60 Identities=5% Similarity=-0.133 Sum_probs=32.8
Q ss_pred CCeEEEEccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCC
Q psy8015 27 RLDCLALTSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYP 100 (165)
Q Consensus 27 ~~~vLei~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~ 100 (165)
-.++|=+||+|..|..+.. .++-+. +++.|++ +++...+..+.......+|+|+.+....
T Consensus 21 ~kkIlvvC~sG~gTS~ll~-----------~kl~~~--~~~~gi~-~~V~~~~~~~~~~~~~~~DlIist~~l~ 80 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAA-----------EEIKEL--CQSHNIP-VELIQCRVNEIETYMDGVHLICTTARVD 80 (113)
T ss_dssp SEEEEEESCSCSSHHHHHH-----------HHHHHH--HHHTTCC-EEEEEECTTTTTTSTTSCSEEEESSCCC
T ss_pred ccEEEEECCCCHHHHHHHH-----------HHHHHH--HHHcCCe-EEEEEecHHHHhhccCCCCEEEECCccc
Confidence 3467766999988877531 112221 3444553 4444444433212234689999876554
No 454
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=64.64 E-value=4 Score=32.52 Aligned_cols=35 Identities=31% Similarity=0.360 Sum_probs=25.8
Q ss_pred CCccEEEEcCCCC----Cch-------------HHHHhccccCcEEEEEecC
Q psy8015 88 GPYDAIHVGAAYP----RYP-------------EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 88 ~~fD~I~i~~~~~----~~p-------------~~l~~~LkpgG~lvi~~~~ 122 (165)
+.+|+|+++.+.+ ++. +...+.|+|||.+++-.-.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvyg 256 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYG 256 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEec
Confidence 6799999997654 211 1246899999999997643
No 455
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=64.61 E-value=18 Score=26.91 Aligned_cols=73 Identities=8% Similarity=-0.063 Sum_probs=46.1
Q ss_pred CCeEEEEccccH-HH----HHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC----------CCCC
Q psy8015 27 RLDCLALTSNTK-QS----TTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG----------DNGP 89 (165)
Q Consensus 27 ~~~vLei~GsG~-~t----~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~----------~~~~ 89 (165)
++++|=.-|+|. ++ ..|++...+|+.++++++-++.+. ++..+..++.++..|..+.-. ..++
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 101 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGR 101 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCC
Confidence 455554422242 33 444445678999999998777653 444444579999999754110 0147
Q ss_pred ccEEEEcCCC
Q psy8015 90 YDAIHVGAAY 99 (165)
Q Consensus 90 fD~I~i~~~~ 99 (165)
.|.++.+++.
T Consensus 102 id~li~~Ag~ 111 (266)
T 3o38_A 102 LDVLVNNAGL 111 (266)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCc
Confidence 8999998775
No 456
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=64.61 E-value=15 Score=30.67 Aligned_cols=82 Identities=1% Similarity=-0.230 Sum_probs=50.4
Q ss_pred CCCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCC
Q psy8015 26 KRLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPR 101 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~ 101 (165)
.|++|.= +|.|..+..+|+. ..+|+.+|+++.....|.. .|. ++ .+..+.+ ...|+|+......+
T Consensus 210 ~GktVgI-iG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~--~G~---~~--~sL~eal---~~ADVVilt~gt~~ 278 (436)
T 3h9u_A 210 AGKTACV-CGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAM--EGY---QV--LLVEDVV---EEAHIFVTTTGNDD 278 (436)
T ss_dssp TTCEEEE-ECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH--TTC---EE--CCHHHHT---TTCSEEEECSSCSC
T ss_pred cCCEEEE-EeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHH--hCC---ee--cCHHHHH---hhCCEEEECCCCcC
Confidence 4677654 4778777666654 3589999999976655532 122 22 1222222 34798887655544
Q ss_pred -chHHHHhccccCcEEEE
Q psy8015 102 -YPEIFIHHLKSGGRLVI 118 (165)
Q Consensus 102 -~p~~l~~~LkpgG~lvi 118 (165)
+..+.++.+|+|.+++-
T Consensus 279 iI~~e~l~~MK~gAIVIN 296 (436)
T 3h9u_A 279 IITSEHFPRMRDDAIVCN 296 (436)
T ss_dssp SBCTTTGGGCCTTEEEEE
T ss_pred ccCHHHHhhcCCCcEEEE
Confidence 44567888999866544
No 457
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=64.27 E-value=13 Score=27.32 Aligned_cols=85 Identities=9% Similarity=-0.034 Sum_probs=51.4
Q ss_pred eEEEE-ccccHHHHHHhcc----C-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCC--C-CCCCccEEEEcCCC
Q psy8015 29 DCLAL-TSNTKQSTTLPTF----I-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASF--G-DNGPYDAIHVGAAY 99 (165)
Q Consensus 29 ~vLei-~GsG~~t~~la~~----~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~--~-~~~~fD~I~i~~~~ 99 (165)
+|| | -|+|+++..+++. . .+|++++++++-++. +...+++++.+|..+.- . .....|+||.+++.
T Consensus 25 ~vl-VtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~ 98 (236)
T 3qvo_A 25 NVL-ILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-----PYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG 98 (236)
T ss_dssp EEE-EETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-----SCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred EEE-EEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-----cccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence 444 5 5689888777653 3 379999998764331 22247899999976421 0 01467999987766
Q ss_pred CCch---HHHHhccccC--cEEEEE
Q psy8015 100 PRYP---EIFIHHLKSG--GRLVIP 119 (165)
Q Consensus 100 ~~~p---~~l~~~Lkpg--G~lvi~ 119 (165)
.... ..+.+.++.. |++|..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~iV~i 123 (236)
T 3qvo_A 99 EDLDIQANSVIAAMKACDVKRLIFV 123 (236)
T ss_dssp TTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CchhHHHHHHHHHHHHcCCCEEEEE
Confidence 5432 2344444433 566654
No 458
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=64.10 E-value=12 Score=26.90 Aligned_cols=81 Identities=9% Similarity=-0.017 Sum_probs=51.8
Q ss_pred ccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCC-CCCCccEEEEcCCCCC---c---
Q psy8015 34 TSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFG-DNGPYDAIHVGAAYPR---Y--- 102 (165)
Q Consensus 34 ~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~-~~~~fD~I~i~~~~~~---~--- 102 (165)
-|||+++..+++. ..+|++++++++-.+.. . ..+++++.+|..+... ....+|+|+..++... .
T Consensus 7 GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~---~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~ 81 (224)
T 3h2s_A 7 GATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR--L---GATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGYL 81 (224)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--T---CTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTHH
T ss_pred cCCCHHHHHHHHHHHHCCCEEEEEEecccccccc--c---CCCceEEecccccccHhhcccCCEEEECCccCCCcchhhH
Confidence 5678888777764 36899999998765532 1 2478999999764321 1246899998876631 1
Q ss_pred ----hHHHHhcccc-CcEEEEE
Q psy8015 103 ----PEIFIHHLKS-GGRLVIP 119 (165)
Q Consensus 103 ----p~~l~~~Lkp-gG~lvi~ 119 (165)
...+.+.++. |+++|..
T Consensus 82 n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 82 HLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp HHHHHHHHHHTCTTCCCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCcEEEE
Confidence 1234555554 4666665
No 459
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=61.87 E-value=11 Score=31.29 Aligned_cols=31 Identities=3% Similarity=-0.269 Sum_probs=24.7
Q ss_pred ccccHHHHHHhc----cCCcEEEEeCCHHHHHhcc
Q psy8015 34 TSNTKQSTTLPT----FIPNSFNINVYYYLSGGPL 64 (165)
Q Consensus 34 ~GsG~~t~~la~----~~~~V~aiD~~~~~~~~A~ 64 (165)
-|.||++..+|. ...+|+++|++++.++..+
T Consensus 14 IGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~ 48 (446)
T 4a7p_A 14 IGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLH 48 (446)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHT
T ss_pred EcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHh
Confidence 699998876665 3468999999999888664
No 460
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=61.82 E-value=4.2 Score=31.42 Aligned_cols=76 Identities=8% Similarity=-0.179 Sum_probs=45.3
Q ss_pred CCCCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccC-CCCCeEEEEccCCCC--CC---CCCCccEEE
Q psy8015 25 SKRLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTI-DPDHDYDLIADGRAS--FG---DNGPYDAIH 94 (165)
Q Consensus 25 ~~~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~-~~~nV~~~~gD~~~~--~~---~~~~fD~I~ 94 (165)
.++++||=.-|+|+++..+++. ..+|++++.++.-....+++.+ ...+++++.+|..+. +. ....+|+|+
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY 91 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence 5788888338889999877763 3589999987643211111111 124689999997541 10 011479999
Q ss_pred EcCCCC
Q psy8015 95 VGAAYP 100 (165)
Q Consensus 95 i~~~~~ 100 (165)
..++..
T Consensus 92 h~A~~~ 97 (335)
T 1rpn_A 92 NLAAQS 97 (335)
T ss_dssp ECCSCC
T ss_pred ECcccc
Confidence 887654
No 461
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=61.60 E-value=23 Score=28.20 Aligned_cols=94 Identities=9% Similarity=-0.063 Sum_probs=57.9
Q ss_pred CCCCeEEEE-ccccHHHHHHhccCCc--EEEEeCCHHHHHhcc--cccC-------C--------------CCCeEEEEc
Q psy8015 25 SKRLDCLAL-TSNTKQSTTLPTFIPN--SFNINVYYYLSGGPL--SSTI-------D--------------PDHDYDLIA 78 (165)
Q Consensus 25 ~~~~~vLei-~GsG~~t~~la~~~~~--V~aiD~~~~~~~~A~--~~~~-------~--------------~~nV~~~~g 78 (165)
.+...|+.+ ||....+-.|....+. ++-+|. |++++.-+ +++. | .++.+++-.
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 356789999 9999888877765444 455555 77776543 3332 1 257899999
Q ss_pred cCCC-CC--------CCCCCccEEEEcCCCCCchHH----HH---hccccCcEEEEE
Q psy8015 79 DGRA-SF--------GDNGPYDAIHVGAAYPRYPEI----FI---HHLKSGGRLVIP 119 (165)
Q Consensus 79 D~~~-~~--------~~~~~fD~I~i~~~~~~~p~~----l~---~~LkpgG~lvi~ 119 (165)
|..+ .| .+.....+++.-+....++++ ++ ..+-|+|.+++.
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~~~~~~v~~ 231 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKFSHGLWISY 231 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEEEEE
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhCCCcEEEEE
Confidence 9865 22 122345677777777776642 22 222378877643
No 462
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=60.69 E-value=12 Score=30.92 Aligned_cols=94 Identities=9% Similarity=-0.034 Sum_probs=54.3
Q ss_pred CCCeEEEE--ccccHHHHH-HhccCCcEEEEeCCHHHH-Hhc-ccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCC
Q psy8015 26 KRLDCLAL--TSNTKQSTT-LPTFIPNSFNINVYYYLS-GGP-LSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYP 100 (165)
Q Consensus 26 ~~~~vLei--~GsG~~t~~-la~~~~~V~aiD~~~~~~-~~A-~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~ 100 (165)
++++|+=+ .++|..++. |.+...+|++.|.++... ... ++++. ++++..+........ +.+|.|+++.+.+
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~---gi~~~~g~~~~~~~~-~~~d~vv~spgi~ 83 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEE---GIKVVCGSHPLELLD-EDFCYMIKNPGIP 83 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHT---TCEEEESCCCGGGGG-SCEEEEEECTTSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhC---CCEEEECCChHHhhc-CCCCEEEECCcCC
Confidence 57888888 666655443 444567999999865311 111 24443 467777654322211 2399999987764
Q ss_pred -CchH---------------HHHhccccCcEEEEEecCCC
Q psy8015 101 -RYPE---------------IFIHHLKSGGRLVIPIGDTK 124 (165)
Q Consensus 101 -~~p~---------------~l~~~LkpgG~lvi~~~~~~ 124 (165)
+-|+ ++...+.+ +.++.+.|+.+
T Consensus 84 ~~~p~~~~a~~~gi~v~~~~e~~~~~~~-~~~IaVTGTnG 122 (451)
T 3lk7_A 84 YNNPMVKKALEKQIPVLTEVELAYLVSE-SQLIGITGSNG 122 (451)
T ss_dssp TTSHHHHHHHHTTCCEECHHHHHHHHCC-SEEEEEECSSC
T ss_pred CCChhHHHHHHCCCcEEeHHHHHHHhcC-CCEEEEECCCC
Confidence 3332 23333333 48888887664
No 463
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=60.67 E-value=10 Score=31.46 Aligned_cols=31 Identities=10% Similarity=-0.269 Sum_probs=24.2
Q ss_pred ccccHHHHHHhcc----CCcEEEEeCCHHHHHhcc
Q psy8015 34 TSNTKQSTTLPTF----IPNSFNINVYYYLSGGPL 64 (165)
Q Consensus 34 ~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~ 64 (165)
-|+||++..+|.. ..+|+++|++++.++..+
T Consensus 8 IG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~ 42 (450)
T 3gg2_A 8 VGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLN 42 (450)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred ECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHH
Confidence 5889888766653 468999999999887654
No 464
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=60.20 E-value=14 Score=28.43 Aligned_cols=72 Identities=7% Similarity=-0.288 Sum_probs=42.7
Q ss_pred CCeEEEE-ccccHHHHHHhcc----CCcEEEEeCCHHHHHhcc-cccCC--CCCeEEEEccCCCCCC--C-CCCccEEEE
Q psy8015 27 RLDCLAL-TSNTKQSTTLPTF----IPNSFNINVYYYLSGGPL-SSTID--PDHDYDLIADGRASFG--D-NGPYDAIHV 95 (165)
Q Consensus 27 ~~~vLei-~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~-~~~~~--~~nV~~~~gD~~~~~~--~-~~~fD~I~i 95 (165)
+++|| | -|+|+++..+++. ..+|+++.++++-.+.+. +..+. ..+++++.+|..+.-. . ...+|.||-
T Consensus 5 ~~~vl-VTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 83 (337)
T 2c29_D 5 SETVC-VTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH 83 (337)
T ss_dssp -CEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred CCEEE-EECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence 45665 5 5599999887764 357999888765332221 11111 1258899999764211 0 135799887
Q ss_pred cCCC
Q psy8015 96 GAAY 99 (165)
Q Consensus 96 ~~~~ 99 (165)
.++.
T Consensus 84 ~A~~ 87 (337)
T 2c29_D 84 VATP 87 (337)
T ss_dssp CCCC
T ss_pred eccc
Confidence 6653
No 465
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=59.89 E-value=14 Score=28.91 Aligned_cols=85 Identities=6% Similarity=-0.059 Sum_probs=49.5
Q ss_pred CeEEEEccccHHHHHHhcc----CC--cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCC-CCCCCCCccEEEEcCCCC
Q psy8015 28 LDCLALTSNTKQSTTLPTF----IP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRA-SFGDNGPYDAIHVGAAYP 100 (165)
Q Consensus 28 ~~vLei~GsG~~t~~la~~----~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~-~~~~~~~fD~I~i~~~~~ 100 (165)
++|.=| |.|.++..+++. .. +|+++|.+++.++.++ +.|... + ...|..+ . ....|+|++.-...
T Consensus 34 ~kI~II-G~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~--~~G~~~-~-~~~~~~~~~---~~~aDvVilavp~~ 105 (314)
T 3ggo_A 34 QNVLIV-GVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV--DLGIID-E-GTTSIAKVE---DFSPDFVMLSSPVR 105 (314)
T ss_dssp SEEEEE-SCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH--HTTSCS-E-EESCTTGGG---GGCCSEEEECSCGG
T ss_pred CEEEEE-eeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH--HCCCcc-h-hcCCHHHHh---hccCCEEEEeCCHH
Confidence 566555 778777666653 33 7999999998887764 223311 1 1223221 1 23579999865544
Q ss_pred Cch---HHHHhccccCcEEEEEec
Q psy8015 101 RYP---EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 101 ~~p---~~l~~~LkpgG~lvi~~~ 121 (165)
.+. +++...|+||. +++.+.
T Consensus 106 ~~~~vl~~l~~~l~~~~-iv~d~~ 128 (314)
T 3ggo_A 106 TFREIAKKLSYILSEDA-TVTDQG 128 (314)
T ss_dssp GHHHHHHHHHHHSCTTC-EEEECC
T ss_pred HHHHHHHHHhhccCCCc-EEEECC
Confidence 333 34556677765 455554
No 466
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=59.33 E-value=3.7 Score=27.24 Aligned_cols=68 Identities=7% Similarity=-0.055 Sum_probs=41.0
Q ss_pred CeEEEEccccHHHHHHhccCCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCCchHHHH
Q psy8015 28 LDCLALTSNTKQSTTLPTFIPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPRYPEIFI 107 (165)
Q Consensus 28 ~~vLei~GsG~~t~~la~~~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~~p~~l~ 107 (165)
.+||=+||+|..|..++. ++-+.+ ++.|+ ++++...+..+.......||+|+++.-..+..+++.
T Consensus 4 kkIll~Cg~G~sTS~l~~------------k~~~~~--~~~gi-~~~i~a~~~~~~~~~~~~~Dvil~~pqv~~~~~~~~ 68 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVS------------KMRAQA--EKYEV-PVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQ 68 (106)
T ss_dssp EEEEEECSSSTTTHHHHH------------HHHHHH--HHSCC-SEEEEEECSSSTTHHHHHCSEEEECTTSGGGHHHHH
T ss_pred cEEEEECCCchhHHHHHH------------HHHHHH--HHCCC-CeEEEEecHHHHHhhccCCCEEEEccchhhhHHHHH
Confidence 357744999998887763 333333 34455 367776665443222246899998876666555555
Q ss_pred hcc
Q psy8015 108 HHL 110 (165)
Q Consensus 108 ~~L 110 (165)
+..
T Consensus 69 ~~~ 71 (106)
T 1e2b_A 69 RLL 71 (106)
T ss_dssp HHS
T ss_pred HHh
Confidence 544
No 467
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=59.28 E-value=20 Score=27.83 Aligned_cols=88 Identities=7% Similarity=-0.130 Sum_probs=44.5
Q ss_pred eEEEEccccHHHHHHhc----cCCcEEEEeCCHHHHHhcc-----cccCCCCCeEEEEccCCCCCCCC-CCccEEEEcCC
Q psy8015 29 DCLALTSNTKQSTTLPT----FIPNSFNINVYYYLSGGPL-----SSTIDPDHDYDLIADGRASFGDN-GPYDAIHVGAA 98 (165)
Q Consensus 29 ~vLei~GsG~~t~~la~----~~~~V~aiD~~~~~~~~A~-----~~~~~~~nV~~~~gD~~~~~~~~-~~fD~I~i~~~ 98 (165)
+|+=| |.|.++..+|. ...+|+.+++++. +..+ .......+.++..-.+.....+. ..+|+|++.-.
T Consensus 4 kI~Ii-GaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK 80 (320)
T 3i83_A 4 NILVI-GTGAIGSFYGALLAKTGHCVSVVSRSDY--ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIK 80 (320)
T ss_dssp EEEEE-SCCHHHHHHHHHHHHTTCEEEEECSTTH--HHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCC
T ss_pred EEEEE-CcCHHHHHHHHHHHhCCCeEEEEeCChH--HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecC
Confidence 44444 77766655544 3468999999872 3222 11101122332111111111111 37999999755
Q ss_pred CCC---chHHHHhccccCcEEEEE
Q psy8015 99 YPR---YPEIFIHHLKSGGRLVIP 119 (165)
Q Consensus 99 ~~~---~p~~l~~~LkpgG~lvi~ 119 (165)
... ..+.+...|+++..++..
T Consensus 81 ~~~~~~~l~~l~~~l~~~t~Iv~~ 104 (320)
T 3i83_A 81 VVEGADRVGLLRDAVAPDTGIVLI 104 (320)
T ss_dssp CCTTCCHHHHHTTSCCTTCEEEEE
T ss_pred CCChHHHHHHHHhhcCCCCEEEEe
Confidence 443 335566677777665544
No 468
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=58.83 E-value=11 Score=29.24 Aligned_cols=88 Identities=10% Similarity=-0.169 Sum_probs=51.7
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHh-c-ccccCC----CCCeEEEEccC
Q psy8015 11 SGAVAKYVTYLSGHSKRLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGG-P-LSSTID----PDHDYDLIADG 80 (165)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~-A-~~~~~~----~~nV~~~~gD~ 80 (165)
++........+. ..+++||=.-|||+++..+++. ..+|+++++++.-... . .++... ..+++++.+|.
T Consensus 11 ~~~~~~~~~~~~--~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 88 (351)
T 3ruf_A 11 MSRYEEITQQLI--FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI 88 (351)
T ss_dssp CHHHHHHHHHHH--HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT
T ss_pred HHHHhhHHhhCC--CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC
Confidence 344444444443 2457887337789999877764 3689999985432111 1 111111 15799999997
Q ss_pred CCCC--C-CCCCccEEEEcCCCC
Q psy8015 81 RASF--G-DNGPYDAIHVGAAYP 100 (165)
Q Consensus 81 ~~~~--~-~~~~fD~I~i~~~~~ 100 (165)
.+.- . ....+|+|+-.++..
T Consensus 89 ~d~~~~~~~~~~~d~Vih~A~~~ 111 (351)
T 3ruf_A 89 RDLTTCEQVMKGVDHVLHQAALG 111 (351)
T ss_dssp TCHHHHHHHTTTCSEEEECCCCC
T ss_pred CCHHHHHHHhcCCCEEEECCccC
Confidence 5421 0 123689999888764
No 469
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=58.76 E-value=8.6 Score=29.35 Aligned_cols=35 Identities=6% Similarity=-0.130 Sum_probs=24.1
Q ss_pred eEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcc
Q psy8015 29 DCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPL 64 (165)
Q Consensus 29 ~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~ 64 (165)
+|.= .|.|.++..++.. ..+|+.+|++++.++..+
T Consensus 5 ~i~i-iG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~ 43 (316)
T 2ew2_A 5 KIAI-AGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIR 43 (316)
T ss_dssp EEEE-ECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred eEEE-ECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence 4444 4777777666543 458999999998777553
No 470
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=58.71 E-value=30 Score=25.89 Aligned_cols=61 Identities=10% Similarity=-0.062 Sum_probs=43.4
Q ss_pred HHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC----------CCCCCccEEEEcCCC
Q psy8015 39 QSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF----------GDNGPYDAIHVGAAY 99 (165)
Q Consensus 39 ~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~----------~~~~~fD~I~i~~~~ 99 (165)
.+..|++...+|+..+++++..+.+. +++.+-.++.++..|..+.. ...++.|.++.+++.
T Consensus 24 iA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 24 VAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAF 96 (256)
T ss_dssp HHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEecccc
Confidence 45667777789999999988777663 55556567899999975321 112689998887654
No 471
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=58.71 E-value=28 Score=26.53 Aligned_cols=73 Identities=7% Similarity=-0.064 Sum_probs=48.1
Q ss_pred CCCeEEEE-cccc---HHHHHHhccCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC----------CCCCC
Q psy8015 26 KRLDCLAL-TSNT---KQSTTLPTFIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF----------GDNGP 89 (165)
Q Consensus 26 ~~~~vLei-~GsG---~~t~~la~~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~----------~~~~~ 89 (165)
+++.+|=- .++| ..+..|++...+|+.+|++++.++.+. ++..| .++.++..|..+.- ...++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g-~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 84 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG-KEVLGVKADVSKKKDVEEFVRRTFETYSR 84 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35555544 4444 344556666789999999999887663 55555 36889999975311 11268
Q ss_pred ccEEEEcCCC
Q psy8015 90 YDAIHVGAAY 99 (165)
Q Consensus 90 fD~I~i~~~~ 99 (165)
.|+++.+++.
T Consensus 85 iDiLVNNAGi 94 (254)
T 4fn4_A 85 IDVLCNNAGI 94 (254)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCcc
Confidence 8998887753
No 472
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=58.62 E-value=12 Score=28.84 Aligned_cols=72 Identities=7% Similarity=-0.200 Sum_probs=42.8
Q ss_pred CCeEEEE-ccccHHHHHHhcc----CCcEEEEeCCHHHHHhcc-cccC-CCCCeEEEEccCCCCCC--C-CCCccEEEEc
Q psy8015 27 RLDCLAL-TSNTKQSTTLPTF----IPNSFNINVYYYLSGGPL-SSTI-DPDHDYDLIADGRASFG--D-NGPYDAIHVG 96 (165)
Q Consensus 27 ~~~vLei-~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~-~~~~-~~~nV~~~~gD~~~~~~--~-~~~fD~I~i~ 96 (165)
+++|| | -|+|+++..+++. ..+|+++.++++-.+... +..+ ...+++++.+|..+.-. . ...+|+||-.
T Consensus 9 ~~~vl-VTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 87 (338)
T 2rh8_A 9 KKTAC-VVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHV 87 (338)
T ss_dssp CCEEE-EECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred CCEEE-EECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence 46665 5 6699999888764 357998887764322111 1111 12368899999764211 0 1357998876
Q ss_pred CCC
Q psy8015 97 AAY 99 (165)
Q Consensus 97 ~~~ 99 (165)
++.
T Consensus 88 A~~ 90 (338)
T 2rh8_A 88 ATP 90 (338)
T ss_dssp SSC
T ss_pred CCc
Confidence 543
No 473
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=57.87 E-value=6.5 Score=27.57 Aligned_cols=62 Identities=16% Similarity=0.294 Sum_probs=35.5
Q ss_pred CHHHHHhcc--cccCCCCCeEEEEcc----CCCCCCCCCCccEEEEcCCC----CCch----HHHHhccccCcEEEE
Q psy8015 56 YYYLSGGPL--SSTIDPDHDYDLIAD----GRASFGDNGPYDAIHVGAAY----PRYP----EIFIHHLKSGGRLVI 118 (165)
Q Consensus 56 ~~~~~~~A~--~~~~~~~nV~~~~gD----~~~~~~~~~~fD~I~i~~~~----~~~p----~~l~~~LkpgG~lvi 118 (165)
+|+.++.++ ..+.+-..++...-| +.-.++ ..+||.|++-... ..+| ..+.+.|||||+|..
T Consensus 21 ~pe~le~~k~~~~~~~~~~~d~qmlDRLa~G~VsLp-~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 21 TPELVENTKAQAASKKVKFVDQFLINKLNDGSITLE-NAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp SHHHHHHHHHHHHHTTEEEEEEEEHHHHHHTCCCCC-SSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CHHHHHHHHHhhhccccchhhHHHHHHHhcCcccCC-cccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 566666664 111011223443333 333344 4789999885432 2344 467899999999986
No 474
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=57.10 E-value=31 Score=29.11 Aligned_cols=85 Identities=5% Similarity=-0.156 Sum_probs=52.5
Q ss_pred CCCeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCC
Q psy8015 26 KRLDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPR 101 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~ 101 (165)
.+++|.=| |.|.++..+|+. .-+|+++|.++.....+. ..|. ++ .+..+.+ ...|+|++.....+
T Consensus 256 ~GktVgII-G~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~--~~g~---~~--~~l~ell---~~aDiVi~~~~t~~ 324 (479)
T 1v8b_A 256 SGKIVVIC-GYGDVGKGCASSMKGLGARVYITEIDPICAIQAV--MEGF---NV--VTLDEIV---DKGDFFITCTGNVD 324 (479)
T ss_dssp TTSEEEEE-CCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH--TTTC---EE--CCHHHHT---TTCSEEEECCSSSS
T ss_pred CCCEEEEE-eeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH--HcCC---Ee--cCHHHHH---hcCCEEEECCChhh
Confidence 56777655 778777666654 358999999997653332 1122 22 1221222 35799999855444
Q ss_pred -chHHHHhccccCcEEEEEecC
Q psy8015 102 -YPEIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 102 -~p~~l~~~LkpgG~lvi~~~~ 122 (165)
+..+.++.+|||.++ +.++.
T Consensus 325 lI~~~~l~~MK~gail-iNvgr 345 (479)
T 1v8b_A 325 VIKLEHLLKMKNNAVV-GNIGH 345 (479)
T ss_dssp SBCHHHHTTCCTTCEE-EECSS
T ss_pred hcCHHHHhhcCCCcEE-EEeCC
Confidence 445777899997765 44543
No 475
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=57.05 E-value=27 Score=26.11 Aligned_cols=74 Identities=8% Similarity=-0.054 Sum_probs=47.7
Q ss_pred CCCeEEEEccccHHHHHHhc----cCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC----------CCCC
Q psy8015 26 KRLDCLALTSNTKQSTTLPT----FIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG----------DNGP 89 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la~----~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~----------~~~~ 89 (165)
.++++|=.-|+|.++..+++ ...+|+.++++++-++.+. ++..+..++.++..|..+.-. ..++
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG 88 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 34555433556666555554 4568999999998877653 554454579999999754210 1147
Q ss_pred ccEEEEcCCC
Q psy8015 90 YDAIHVGAAY 99 (165)
Q Consensus 90 fD~I~i~~~~ 99 (165)
.|.++.+++.
T Consensus 89 id~lvnnAg~ 98 (262)
T 3pk0_A 89 IDVVCANAGV 98 (262)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999988764
No 476
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=56.87 E-value=24 Score=29.66 Aligned_cols=37 Identities=3% Similarity=-0.309 Sum_probs=25.0
Q ss_pred CCCeEEEEccccHHHHHH----hcc-CC-cEEEEeCCHH----HHHhc
Q psy8015 26 KRLDCLALTSNTKQSTTL----PTF-IP-NSFNINVYYY----LSGGP 63 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~l----a~~-~~-~V~aiD~~~~----~~~~A 63 (165)
+-++|-=| |.||++..+ ++. .. +|+.+|++++ .++..
T Consensus 17 ~~mkIaVI-GlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l 63 (478)
T 3g79_A 17 PIKKIGVL-GMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEML 63 (478)
T ss_dssp SCCEEEEE-CCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHH
T ss_pred CCCEEEEE-CcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHH
Confidence 44565544 788776544 445 45 7999999998 66554
No 477
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=56.82 E-value=14 Score=31.29 Aligned_cols=86 Identities=12% Similarity=-0.023 Sum_probs=55.9
Q ss_pred CeEEEEccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCC----CCCCCccEEEEcCCC
Q psy8015 28 LDCLALTSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASF----GDNGPYDAIHVGAAY 99 (165)
Q Consensus 28 ~~vLei~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~----~~~~~fD~I~i~~~~ 99 (165)
++++= ||.|-++..+++. ...|+.+|.+++.++.+ . .++.||+.+.. ..-..+|.+++....
T Consensus 349 ~~viI-iG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~-----~----~~i~gD~t~~~~L~~agi~~ad~vi~~~~~ 418 (565)
T 4gx0_A 349 ELIFI-IGHGRIGCAAAAFLDRKPVPFILIDRQESPVCND-----H----VVVYGDATVGQTLRQAGIDRASGIIVTTND 418 (565)
T ss_dssp CCEEE-ECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCS-----S----CEEESCSSSSTHHHHHTTTSCSEEEECCSC
T ss_pred CCEEE-ECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhc-----C----CEEEeCCCCHHHHHhcCccccCEEEEECCC
Confidence 45433 6889888777764 46899999999866532 1 78999986521 123689999886554
Q ss_pred CC--c-hHHHHhccccCcEEEEEecCC
Q psy8015 100 PR--Y-PEIFIHHLKSGGRLVIPIGDT 123 (165)
Q Consensus 100 ~~--~-p~~l~~~LkpgG~lvi~~~~~ 123 (165)
.. + -....+.|.|.-++++-..+.
T Consensus 419 d~~ni~~~~~ak~l~~~~~iiar~~~~ 445 (565)
T 4gx0_A 419 DSTNIFLTLACRHLHSHIRIVARANGE 445 (565)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEEESST
T ss_pred chHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 31 1 123457777776777765543
No 478
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=56.44 E-value=16 Score=30.92 Aligned_cols=59 Identities=7% Similarity=-0.159 Sum_probs=43.2
Q ss_pred ccccHHHHHHhccC----CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--C--CCCCCccEEEEc
Q psy8015 34 TSNTKQSTTLPTFI----PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--F--GDNGPYDAIHVG 96 (165)
Q Consensus 34 ~GsG~~t~~la~~~----~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~--~~~~~fD~I~i~ 96 (165)
||.|.++..+++.. ..|+.+|.+++.++.++.+ .++.++.||+.+. + .....+|.+++.
T Consensus 133 ~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~----~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t 199 (565)
T 4gx0_A 133 FGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQ----EGFKVVYGSPTDAHVLAGLRVAAARSIIAN 199 (565)
T ss_dssp ESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHS----CSSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred ECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh----cCCeEEEeCCCCHHHHHhcCcccCCEEEEe
Confidence 79998888888753 4799999999998877522 1578999998641 1 123568988874
No 479
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=55.39 E-value=34 Score=25.34 Aligned_cols=77 Identities=10% Similarity=0.019 Sum_probs=43.0
Q ss_pred ccccHHHHHHhc----cC-CcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCCchHHHHh
Q psy8015 34 TSNTKQSTTLPT----FI-PNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPRYPEIFIH 108 (165)
Q Consensus 34 ~GsG~~t~~la~----~~-~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~~p~~l~~ 108 (165)
-|.|.++..++. .. .+|+.+|++++.++..+. ..| +.+ ..|..+. . ..|+|++.-. +...+.+.+
T Consensus 6 iG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~-~~g---~~~-~~~~~~~---~-~~D~vi~~v~-~~~~~~v~~ 75 (263)
T 1yqg_A 6 LGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEK-ELG---VET-SATLPEL---H-SDDVLILAVK-PQDMEAACK 75 (263)
T ss_dssp ECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHH-HTC---CEE-ESSCCCC---C-TTSEEEECSC-HHHHHHHHT
T ss_pred ECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHH-hcC---CEE-eCCHHHH---h-cCCEEEEEeC-chhHHHHHH
Confidence 477777655554 34 689999999887765532 123 232 2232221 2 5788888655 322234444
Q ss_pred ccccCcEEEEEe
Q psy8015 109 HLKSGGRLVIPI 120 (165)
Q Consensus 109 ~LkpgG~lvi~~ 120 (165)
.|++.|.+++.+
T Consensus 76 ~l~~~~~ivv~~ 87 (263)
T 1yqg_A 76 NIRTNGALVLSV 87 (263)
T ss_dssp TCCCTTCEEEEC
T ss_pred HhccCCCEEEEe
Confidence 554326666665
No 480
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=54.36 E-value=36 Score=25.37 Aligned_cols=63 Identities=6% Similarity=-0.228 Sum_probs=41.3
Q ss_pred ccccHHHHHHhcc-----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCC--CC-CCCCccEEEEcCCCCC
Q psy8015 34 TSNTKQSTTLPTF-----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRAS--FG-DNGPYDAIHVGAAYPR 101 (165)
Q Consensus 34 ~GsG~~t~~la~~-----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~--~~-~~~~fD~I~i~~~~~~ 101 (165)
-|||+++..+++. ..+|+++.++++-.+. +. ..+++++.+|..+. +. ....+|+||..++...
T Consensus 7 GatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~--~~---~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~ 77 (289)
T 3e48_A 7 GATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD--DW---RGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIH 77 (289)
T ss_dssp TTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG--GG---BTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCC
T ss_pred cCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH--hh---hCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc
Confidence 5589888766653 4589999998864321 21 24689999997541 11 1246899998877643
No 481
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=54.02 E-value=36 Score=25.93 Aligned_cols=72 Identities=8% Similarity=-0.146 Sum_probs=41.8
Q ss_pred CCeEEEEccccHHHHHHhc----cCCcEEEEeCCH--HHHHhc-c-cccCCCCCeEEEEccCCCCC----------CCCC
Q psy8015 27 RLDCLALTSNTKQSTTLPT----FIPNSFNINVYY--YLSGGP-L-SSTIDPDHDYDLIADGRASF----------GDNG 88 (165)
Q Consensus 27 ~~~vLei~GsG~~t~~la~----~~~~V~aiD~~~--~~~~~A-~-~~~~~~~nV~~~~gD~~~~~----------~~~~ 88 (165)
++++|=.-|+|.++..+++ ...+|+.++.+. +..+.. + ++..+ .++.++..|..+.- ...+
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 127 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG-RKAVLLPGDLSDESFARSLVHKAREALG 127 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT-CCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC-CcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4555544555555554444 456899998873 333332 2 33333 46888888875411 0114
Q ss_pred CccEEEEcCCC
Q psy8015 89 PYDAIHVGAAY 99 (165)
Q Consensus 89 ~fD~I~i~~~~ 99 (165)
+.|.++.+++.
T Consensus 128 ~iD~lv~nAg~ 138 (294)
T 3r3s_A 128 GLDILALVAGK 138 (294)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999988765
No 482
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=53.68 E-value=21 Score=26.83 Aligned_cols=79 Identities=10% Similarity=-0.068 Sum_probs=45.4
Q ss_pred ccccHHHHHHhcc----CCcEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCCch---HHH
Q psy8015 34 TSNTKQSTTLPTF----IPNSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPRYP---EIF 106 (165)
Q Consensus 34 ~GsG~~t~~la~~----~~~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~~p---~~l 106 (165)
.|.|.++..++.. ..+|+.+|.+++.++.++ +.|... . ...|..+. ...|+|++.-...... +.+
T Consensus 6 iG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~--~~g~~~-~-~~~~~~~~----~~~D~vi~av~~~~~~~~~~~l 77 (279)
T 2f1k_A 6 VGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV--ERQLVD-E-AGQDLSLL----QTAKIIFLCTPIQLILPTLEKL 77 (279)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH--HTTSCS-E-EESCGGGG----TTCSEEEECSCHHHHHHHHHHH
T ss_pred EcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--hCCCCc-c-ccCCHHHh----CCCCEEEEECCHHHHHHHHHHH
Confidence 4788877666653 347999999998877654 234321 1 12232221 3589999865543222 344
Q ss_pred HhccccCcEEEEEec
Q psy8015 107 IHHLKSGGRLVIPIG 121 (165)
Q Consensus 107 ~~~LkpgG~lvi~~~ 121 (165)
...++++. +++.+.
T Consensus 78 ~~~~~~~~-~vv~~~ 91 (279)
T 2f1k_A 78 IPHLSPTA-IVTDVA 91 (279)
T ss_dssp GGGSCTTC-EEEECC
T ss_pred HhhCCCCC-EEEECC
Confidence 45566655 455553
No 483
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=53.00 E-value=34 Score=25.56 Aligned_cols=94 Identities=15% Similarity=0.076 Sum_probs=53.7
Q ss_pred CCeEEEEccccHHHHHHh----ccCCcEEEEeC-CHHHHHhc-c-cccCCCCCeEEEEccCCCCCC----------CCCC
Q psy8015 27 RLDCLALTSNTKQSTTLP----TFIPNSFNINV-YYYLSGGP-L-SSTIDPDHDYDLIADGRASFG----------DNGP 89 (165)
Q Consensus 27 ~~~vLei~GsG~~t~~la----~~~~~V~aiD~-~~~~~~~A-~-~~~~~~~nV~~~~gD~~~~~~----------~~~~ 89 (165)
++++|=.-|+|.++..++ +...+|+.++. +++..+.. + ++..+ .++.++..|..+.-. ..++
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 96 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG-SDAIAIKADIRQVPEIVKLFDQAVAHFGH 96 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 455553344555554444 44568888775 44444433 2 44333 468899999754110 1147
Q ss_pred ccEEEEcCCCCCc------h-H------------------HHHhccccCcEEEEEec
Q psy8015 90 YDAIHVGAAYPRY------P-E------------------IFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 90 fD~I~i~~~~~~~------p-~------------------~l~~~LkpgG~lvi~~~ 121 (165)
.|+++.+++.... . + .+.+.++++|++|....
T Consensus 97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 8999887765321 1 1 24567778999887543
No 484
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=52.77 E-value=81 Score=25.09 Aligned_cols=87 Identities=11% Similarity=-0.035 Sum_probs=48.7
Q ss_pred CCCCeEEEEccccHHHHHHhc---cC-C-cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCCCccEEEEcCCC
Q psy8015 25 SKRLDCLALTSNTKQSTTLPT---FI-P-NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNGPYDAIHVGAAY 99 (165)
Q Consensus 25 ~~~~~vLei~GsG~~t~~la~---~~-~-~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~ 99 (165)
..|++|+-- |.|.-+..|.. +. . -...+|.||.-.- + ...-.++.++.-+... ....|.|++- .
T Consensus 317 ~~gk~v~~y-Ga~~~g~~l~~~~~~~~~~i~~~~D~~~~k~g--~--~~~g~~ipi~~p~~~~----~~~~d~vl~~--~ 385 (416)
T 4e2x_A 317 AEGRSVVGY-GATAKSATVTNFCGIGPDLVHSVYDTTPDKQN--R--LTPGAHIPVRPASAFS----DPYPDYALLF--A 385 (416)
T ss_dssp HTTCCEEEE-CCCSHHHHHHHHHTCCTTTSCCEEESCGGGTT--E--ECTTTCCEEEEGGGCC----SSCCSEEEES--C
T ss_pred HcCCeEEEE-ccccHHHHHHHhcCCCcceeeEEEeCCccccC--c--cCCCCCCcCCCHHHHh----hcCCCEEEEe--c
Confidence 357888655 44433333332 22 2 2456898885332 1 1111246766655432 2467988883 4
Q ss_pred CCchHHHHhccc----cCcEEEEEecC
Q psy8015 100 PRYPEIFIHHLK----SGGRLVIPIGD 122 (165)
Q Consensus 100 ~~~p~~l~~~Lk----pgG~lvi~~~~ 122 (165)
+++-+++.++|+ -||++|+++++
T Consensus 386 ~~~~~ei~~~~~~~~~~g~~~~~~~p~ 412 (416)
T 4e2x_A 386 WNHAEEIMAKEQEFHQAGGRWILYVPE 412 (416)
T ss_dssp GGGHHHHHHHCHHHHHTTCEEEECSSS
T ss_pred chhHHHHHHHHHHHHhcCCEEEEECCc
Confidence 455566655555 49999998875
No 485
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=52.75 E-value=19 Score=27.99 Aligned_cols=46 Identities=4% Similarity=-0.109 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhcCCCCCeEEEE-ccccHHHHHHhccCCcEEEEeCCHHHHH
Q psy8015 12 GAVAKYVTYLSGHSKRLDCLAL-TSNTKQSTTLPTFIPNSFNINVYYYLSG 61 (165)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLei-~GsG~~t~~la~~~~~V~aiD~~~~~~~ 61 (165)
.....+.+.+.. ...+..|. +|+|.+...+.. .+++.-|++++++.
T Consensus 23 ~l~~~i~~~lp~--~~~~yvEpF~GggaV~~~~~~--~~~i~ND~n~~Lin 69 (284)
T 2dpm_A 23 QLLPVIRELIPK--TYNRYFEPFVGGGALFFDLAP--KDAVINDFNAELIN 69 (284)
T ss_dssp GGHHHHHHHSCS--SCSCEEETTCTTCHHHHHHCC--SEEEEEESCHHHHH
T ss_pred HHHHHHHHHhcc--ccCEEEeecCCccHHHHhhhc--cceeeeecchHHHH
Confidence 344555566532 25799999 999999887743 68999999998754
No 486
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=52.72 E-value=27 Score=26.20 Aligned_cols=72 Identities=7% Similarity=-0.119 Sum_probs=45.1
Q ss_pred CCeEEEEccccHHHHHHhc----cCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCCC----------CC-CC
Q psy8015 27 RLDCLALTSNTKQSTTLPT----FIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASFG----------DN-GP 89 (165)
Q Consensus 27 ~~~vLei~GsG~~t~~la~----~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~~----------~~-~~ 89 (165)
++++|=.-|+|.++..+++ ...+|+.++++++-++.+. ++..+ .++.++..|..+.-. .. ++
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 99 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-LNVEGSVCDLLSRTERDKLMQTVAHVFDGK 99 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4555533556666555554 3568999999987766542 33333 368889999753110 01 57
Q ss_pred ccEEEEcCCC
Q psy8015 90 YDAIHVGAAY 99 (165)
Q Consensus 90 fD~I~i~~~~ 99 (165)
.|.++.+++.
T Consensus 100 id~lv~nAg~ 109 (273)
T 1ae1_A 100 LNILVNNAGV 109 (273)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 8999988764
No 487
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=52.51 E-value=31 Score=26.47 Aligned_cols=73 Identities=10% Similarity=-0.074 Sum_probs=47.0
Q ss_pred CCeEEEEccccHHHHHHhc----cCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC----------CCCCCc
Q psy8015 27 RLDCLALTSNTKQSTTLPT----FIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF----------GDNGPY 90 (165)
Q Consensus 27 ~~~vLei~GsG~~t~~la~----~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~----------~~~~~f 90 (165)
++++|=.-|+|.++..+++ ...+|+.++++++-++.+. ++..+..++.++..|..+.- ...++.
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 120 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGAL 120 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4555432555665555544 4568999999988776553 55445457999999976421 012478
Q ss_pred cEEEEcCCC
Q psy8015 91 DAIHVGAAY 99 (165)
Q Consensus 91 D~I~i~~~~ 99 (165)
|.++.+++.
T Consensus 121 D~lvnnAg~ 129 (293)
T 3rih_A 121 DVVCANAGI 129 (293)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999888764
No 488
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=52.49 E-value=29 Score=27.01 Aligned_cols=87 Identities=9% Similarity=-0.041 Sum_probs=47.3
Q ss_pred CeEEEEccccHHHHHHhc----cCCcEEEEeCCHHHHHhcccccC--CCC----CeEEEEccCCCCCCCCCCccEEEEcC
Q psy8015 28 LDCLALTSNTKQSTTLPT----FIPNSFNINVYYYLSGGPLSSTI--DPD----HDYDLIADGRASFGDNGPYDAIHVGA 97 (165)
Q Consensus 28 ~~vLei~GsG~~t~~la~----~~~~V~aiD~~~~~~~~A~~~~~--~~~----nV~~~~gD~~~~~~~~~~fD~I~i~~ 97 (165)
.+|.=| |.|.++..++. ...+|+.++++++.++..+.+.. ..+ ++... .|..+ ....|+||+.-
T Consensus 15 ~kI~iI-G~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~----~~~aDvVil~v 88 (335)
T 1z82_A 15 MRFFVL-GAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRAT-NDLEE----IKKEDILVIAI 88 (335)
T ss_dssp CEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEE-SCGGG----CCTTEEEEECS
T ss_pred CcEEEE-CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEe-CCHHH----hcCCCEEEEEC
Confidence 455555 66766555544 34689999999877665432111 011 22222 22211 24689999965
Q ss_pred CCCCchHHHHhccccCcEEEEEec
Q psy8015 98 AYPRYPEIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 98 ~~~~~p~~l~~~LkpgG~lvi~~~ 121 (165)
.. ..-+++.+.+++.|.+++.+.
T Consensus 89 k~-~~~~~v~~~l~~~~~~vv~~~ 111 (335)
T 1z82_A 89 PV-QYIREHLLRLPVKPSMVLNLS 111 (335)
T ss_dssp CG-GGHHHHHTTCSSCCSEEEECC
T ss_pred CH-HHHHHHHHHhCcCCCEEEEEe
Confidence 43 333445566664555666654
No 489
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=52.21 E-value=62 Score=25.12 Aligned_cols=84 Identities=15% Similarity=0.085 Sum_probs=49.5
Q ss_pred ccccHHHHHHhcc------CCcEEEEeCCHHHHHh-c-ccc----cCCCCCeEEEE-ccCCCCCCCCCCccEEEEcCCCC
Q psy8015 34 TSNTKQSTTLPTF------IPNSFNINVYYYLSGG-P-LSS----TIDPDHDYDLI-ADGRASFGDNGPYDAIHVGAAYP 100 (165)
Q Consensus 34 ~GsG~~t~~la~~------~~~V~aiD~~~~~~~~-A-~~~----~~~~~nV~~~~-gD~~~~~~~~~~fD~I~i~~~~~ 100 (165)
.|.|.++..++.. +.+|+-+|++++.++- + .++ .+. .+.++.. .| .+.+ ...|+|++.+..+
T Consensus 6 iGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~-~~~~i~~t~d-~~a~---~~aDiVViaag~~ 80 (294)
T 1oju_A 6 VGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGID-KYPKIVGGAD-YSLL---KGSEIIVVTAGLA 80 (294)
T ss_dssp ECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTT-CCCEEEEESC-GGGG---TTCSEEEECCCCC
T ss_pred ECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcC-CCCEEEEeCC-HHHh---CCCCEEEECCCCC
Confidence 4778776655543 2389999999988751 2 111 122 2344443 34 3332 3579999988776
Q ss_pred Cch-----H-------------HHHhccccCcEEEEEecC
Q psy8015 101 RYP-----E-------------IFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 101 ~~p-----~-------------~l~~~LkpgG~lvi~~~~ 122 (165)
.-| + +-.....|++++++..++
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNP 120 (294)
T 1oju_A 81 RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120 (294)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence 443 1 113445899998876543
No 490
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=52.16 E-value=19 Score=27.21 Aligned_cols=80 Identities=5% Similarity=-0.070 Sum_probs=45.5
Q ss_pred ccccHHHHHHhcc----CC--cEEEEeCCHHHHHhcccccCCCCCeEEEEccCCCCCCCCC-CccEEEEcCCCCCch---
Q psy8015 34 TSNTKQSTTLPTF----IP--NSFNINVYYYLSGGPLSSTIDPDHDYDLIADGRASFGDNG-PYDAIHVGAAYPRYP--- 103 (165)
Q Consensus 34 ~GsG~~t~~la~~----~~--~V~aiD~~~~~~~~A~~~~~~~~nV~~~~gD~~~~~~~~~-~fD~I~i~~~~~~~p--- 103 (165)
-|.|.++..++.. .. +|+.+|.+++.++.++ +.|... . ...|..+. .. ..|+|++.-......
T Consensus 7 IG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~--~~g~~~-~-~~~~~~~~---~~~~aDvVilavp~~~~~~v~ 79 (281)
T 2g5c_A 7 VGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV--DLGIID-E-GTTSIAKV---EDFSPDFVMLSSPVRTFREIA 79 (281)
T ss_dssp ESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH--HTTSCS-E-EESCGGGG---GGTCCSEEEECSCHHHHHHHH
T ss_pred EecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH--HCCCcc-c-ccCCHHHH---hcCCCCEEEEcCCHHHHHHHH
Confidence 4788877666653 23 7999999998887664 234321 1 11222111 13 589999865443222
Q ss_pred HHHHhccccCcEEEEEec
Q psy8015 104 EIFIHHLKSGGRLVIPIG 121 (165)
Q Consensus 104 ~~l~~~LkpgG~lvi~~~ 121 (165)
+++...++++.. ++.+.
T Consensus 80 ~~l~~~l~~~~i-v~~~~ 96 (281)
T 2g5c_A 80 KKLSYILSEDAT-VTDQG 96 (281)
T ss_dssp HHHHHHSCTTCE-EEECC
T ss_pred HHHHhhCCCCcE-EEECC
Confidence 345566777764 44443
No 491
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=52.04 E-value=65 Score=25.20 Aligned_cols=88 Identities=9% Similarity=0.065 Sum_probs=50.0
Q ss_pred CCeEEEEccccHHHHHHhcc------CCcEEEEeCCHHHHHh-cc-c---ccCCCCCeEEEEccCCCCCCCCCCccEEEE
Q psy8015 27 RLDCLALTSNTKQSTTLPTF------IPNSFNINVYYYLSGG-PL-S---STIDPDHDYDLIADGRASFGDNGPYDAIHV 95 (165)
Q Consensus 27 ~~~vLei~GsG~~t~~la~~------~~~V~aiD~~~~~~~~-A~-~---~~~~~~nV~~~~gD~~~~~~~~~~fD~I~i 95 (165)
..+|.=+ |.|+....++.. +.+++-+|++++.++. +. + ..+. .++++..++ .+. ...-|+|++
T Consensus 5 ~~KI~Ii-GaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~-~~~~v~~~~-~~a---~~~aDvVii 78 (318)
T 1ez4_A 5 HQKVVLV-GDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFT-APKKIYSGE-YSD---CKDADLVVI 78 (318)
T ss_dssp BCEEEEE-CCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGS-CCCEEEECC-GGG---GTTCSEEEE
T ss_pred CCEEEEE-CCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhc-CCeEEEECC-HHH---hCCCCEEEE
Confidence 3455545 557666544432 3589999999987763 32 2 1122 456666433 222 235799999
Q ss_pred cCCCCCchH---------------H---HHhccccCcEEEEEe
Q psy8015 96 GAAYPRYPE---------------I---FIHHLKSGGRLVIPI 120 (165)
Q Consensus 96 ~~~~~~~p~---------------~---l~~~LkpgG~lvi~~ 120 (165)
.+..+..|- + -.....|+|.+++..
T Consensus 79 ~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 121 (318)
T 1ez4_A 79 TAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (318)
T ss_dssp CCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 987765441 1 123448999988853
No 492
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=51.59 E-value=40 Score=24.70 Aligned_cols=72 Identities=10% Similarity=-0.100 Sum_probs=45.6
Q ss_pred CCCeEEEE-ccccHHHHHHhc-----cCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC--C--------CC
Q psy8015 26 KRLDCLAL-TSNTKQSTTLPT-----FIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF--G--------DN 87 (165)
Q Consensus 26 ~~~~vLei-~GsG~~t~~la~-----~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~--~--------~~ 87 (165)
+++++| | -|+|.++..+++ ...+|+.++++++-.+... ++..+ .++.++.+|..+.- . ..
T Consensus 3 ~~k~vl-ITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVAL-VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEE-ESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 345565 6 677777655554 4568999999987665442 33333 46889999975411 0 01
Q ss_pred CCccEEEEcCCC
Q psy8015 88 GPYDAIHVGAAY 99 (165)
Q Consensus 88 ~~fD~I~i~~~~ 99 (165)
+++|+++.+++.
T Consensus 81 g~id~li~~Ag~ 92 (276)
T 1wma_A 81 GGLDVLVNNAGI 92 (276)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 378999887654
No 493
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=51.02 E-value=13 Score=30.44 Aligned_cols=31 Identities=3% Similarity=-0.309 Sum_probs=23.1
Q ss_pred ccccHHHHHHhc----cCCcEEEEeCCHHHHHhcc
Q psy8015 34 TSNTKQSTTLPT----FIPNSFNINVYYYLSGGPL 64 (165)
Q Consensus 34 ~GsG~~t~~la~----~~~~V~aiD~~~~~~~~A~ 64 (165)
-|+|+++..+|. ...+|+++|++++.++..+
T Consensus 6 IG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~ 40 (436)
T 1mv8_A 6 FGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN 40 (436)
T ss_dssp ECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHh
Confidence 488877655554 3468999999999887654
No 494
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=50.87 E-value=90 Score=24.65 Aligned_cols=92 Identities=9% Similarity=0.071 Sum_probs=53.0
Q ss_pred CCCCeEEEEccccHHHHHHhcc------CCcEEEEeCCHHHHHhc-c-cccC-C-CCCeEEEEccCCCCCCCCCCccEEE
Q psy8015 25 SKRLDCLALTSNTKQSTTLPTF------IPNSFNINVYYYLSGGP-L-SSTI-D-PDHDYDLIADGRASFGDNGPYDAIH 94 (165)
Q Consensus 25 ~~~~~vLei~GsG~~t~~la~~------~~~V~aiD~~~~~~~~A-~-~~~~-~-~~nV~~~~gD~~~~~~~~~~fD~I~ 94 (165)
+.+.+|.=+ |.|..+..++.. +.+++-+|++++.++-- . +... . ..++++..+|. +. ....|+|+
T Consensus 7 ~~~~kV~Vi-GaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~-~a---~~~aDiVv 81 (326)
T 3vku_A 7 KDHQKVILV-GDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEY-SD---AKDADLVV 81 (326)
T ss_dssp CCCCEEEEE-CCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCG-GG---GTTCSEEE
T ss_pred CCCCEEEEE-CCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcH-HH---hcCCCEEE
Confidence 456677655 667666555542 35899999999876632 1 2111 0 13566665542 22 34579999
Q ss_pred EcCCCCCchH---------------H---HHhccccCcEEEEEec
Q psy8015 95 VGAAYPRYPE---------------I---FIHHLKSGGRLVIPIG 121 (165)
Q Consensus 95 i~~~~~~~p~---------------~---l~~~LkpgG~lvi~~~ 121 (165)
+.++.+.-|- + ......|++++++..+
T Consensus 82 i~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN 126 (326)
T 3vku_A 82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp ECCCCC----------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred ECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence 9887664331 1 2344679998777544
No 495
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=50.54 E-value=42 Score=25.25 Aligned_cols=72 Identities=6% Similarity=-0.178 Sum_probs=42.3
Q ss_pred CCeEEEE-ccccHHHHHHhc----cCCcEEEEeCCHH-HHHhc-c-cccCCCCCeEEEEccCCCCC----------CCCC
Q psy8015 27 RLDCLAL-TSNTKQSTTLPT----FIPNSFNINVYYY-LSGGP-L-SSTIDPDHDYDLIADGRASF----------GDNG 88 (165)
Q Consensus 27 ~~~vLei-~GsG~~t~~la~----~~~~V~aiD~~~~-~~~~A-~-~~~~~~~nV~~~~gD~~~~~----------~~~~ 88 (165)
++++| | -|+|.++..+++ ...+|+.++.+++ ..+.+ + ++..+ .++.++..|..+.- ...+
T Consensus 29 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 29 GKVAL-VTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-SDAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC-CCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 44444 5 566666655554 3468999998864 23322 2 33333 36888888875311 0014
Q ss_pred CccEEEEcCCCC
Q psy8015 89 PYDAIHVGAAYP 100 (165)
Q Consensus 89 ~fD~I~i~~~~~ 100 (165)
+.|+++.+++..
T Consensus 107 ~iD~lv~~Ag~~ 118 (283)
T 1g0o_A 107 KLDIVCSNSGVV 118 (283)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 789999887653
No 496
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=49.02 E-value=23 Score=27.61 Aligned_cols=82 Identities=9% Similarity=0.013 Sum_probs=45.3
Q ss_pred CeEEEEccccHHHHHHhc----cC-CcEEEEeCCHH-------HHHhcccccCCCCCeEEEEc-cCCCCCCCCCCccEEE
Q psy8015 28 LDCLALTSNTKQSTTLPT----FI-PNSFNINVYYY-------LSGGPLSSTIDPDHDYDLIA-DGRASFGDNGPYDAIH 94 (165)
Q Consensus 28 ~~vLei~GsG~~t~~la~----~~-~~V~aiD~~~~-------~~~~A~~~~~~~~nV~~~~g-D~~~~~~~~~~fD~I~ 94 (165)
.+|.= -|.|+++..++. .. .+|+.+|++++ ..+.+ ...|. .. +..+.. ...|+|+
T Consensus 25 m~Igv-IG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~--~~~g~------~~~s~~e~~---~~aDvVi 92 (317)
T 4ezb_A 25 TTIAF-IGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARA--AELGV------EPLDDVAGI---ACADVVL 92 (317)
T ss_dssp CEEEE-ECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHH--HHTTC------EEESSGGGG---GGCSEEE
T ss_pred CeEEE-ECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHH--HHCCC------CCCCHHHHH---hcCCEEE
Confidence 34544 488888766664 34 58999999983 33322 22232 22 222211 2469998
Q ss_pred EcCCCCCch---HHHHhccccCcEEEEEecC
Q psy8015 95 VGAAYPRYP---EIFIHHLKSGGRLVIPIGD 122 (165)
Q Consensus 95 i~~~~~~~p---~~l~~~LkpgG~lvi~~~~ 122 (165)
+.-..+... +.+...|++|. +++.+.+
T Consensus 93 ~avp~~~~~~~~~~i~~~l~~~~-ivv~~st 122 (317)
T 4ezb_A 93 SLVVGAATKAVAASAAPHLSDEA-VFIDLNS 122 (317)
T ss_dssp ECCCGGGHHHHHHHHGGGCCTTC-EEEECCS
T ss_pred EecCCHHHHHHHHHHHhhcCCCC-EEEECCC
Confidence 865544333 34556677654 5555543
No 497
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=48.96 E-value=60 Score=25.31 Aligned_cols=81 Identities=6% Similarity=-0.022 Sum_probs=49.0
Q ss_pred ccccHHHHHHhcc------CCcEEEEeCCHHHHHh-cc-ccc---CCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCCc
Q psy8015 34 TSNTKQSTTLPTF------IPNSFNINVYYYLSGG-PL-SST---IDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPRY 102 (165)
Q Consensus 34 ~GsG~~t~~la~~------~~~V~aiD~~~~~~~~-A~-~~~---~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~~ 102 (165)
.|.|+....++.. +.+++-+|++++.++. +. +.. +. .++++..+| .+. ...-|+|++.+..+..
T Consensus 6 iGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~-~~~~v~~~~-~~a---~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 6 VGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFA-HPVWVWAGS-YGD---LEGARAVVLAAGVAQR 80 (310)
T ss_dssp ECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGS-CCCEEEECC-GGG---GTTEEEEEECCCCCCC
T ss_pred ECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhc-CCeEEEECC-HHH---hCCCCEEEECCCCCCC
Confidence 4667666554432 3589999999987763 32 221 12 356666544 222 3457999998877654
Q ss_pred hH---------------H---HHhccccCcEEEEE
Q psy8015 103 PE---------------I---FIHHLKSGGRLVIP 119 (165)
Q Consensus 103 p~---------------~---l~~~LkpgG~lvi~ 119 (165)
|- + -.....|++.+++.
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 115 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVA 115 (310)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEe
Confidence 31 1 12334899998885
No 498
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=48.75 E-value=32 Score=22.17 Aligned_cols=72 Identities=3% Similarity=-0.206 Sum_probs=42.1
Q ss_pred CcEEEEeCCHHHHHhcc--cccCC-CCCeEEEEccCCCCC--CCCCCccEEEEcCCCCCch-----HHHHhccccCcEEE
Q psy8015 48 PNSFNINVYYYLSGGPL--SSTID-PDHDYDLIADGRASF--GDNGPYDAIHVGAAYPRYP-----EIFIHHLKSGGRLV 117 (165)
Q Consensus 48 ~~V~aiD~~~~~~~~A~--~~~~~-~~nV~~~~gD~~~~~--~~~~~fD~I~i~~~~~~~p-----~~l~~~LkpgG~lv 117 (165)
.+|.-+|-++...+..+ ++..| . ++. ...++.+.+ ....+||+|+++...+... ..+ +...|.-.++
T Consensus 15 ~~ilivdd~~~~~~~l~~~L~~~g~~-~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l-~~~~~~~~ii 91 (135)
T 3snk_A 15 KQVALFSSDPNFKRDVATRLDALAIY-DVR-VSETDDFLKGPPADTRPGIVILDLGGGDLLGKPGIVEA-RALWATVPLI 91 (135)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTSSE-EEE-EECGGGGGGCCCTTCCCSEEEEEEETTGGGGSTTHHHH-HGGGTTCCEE
T ss_pred cEEEEEcCCHHHHHHHHHHHhhcCCe-EEE-EeccHHHHHHHHhccCCCEEEEeCCCCCchHHHHHHHH-HhhCCCCcEE
Confidence 47899999998887764 56555 3 333 333433322 2346799999987665432 233 3344455555
Q ss_pred EEecC
Q psy8015 118 IPIGD 122 (165)
Q Consensus 118 i~~~~ 122 (165)
+..+.
T Consensus 92 ~~s~~ 96 (135)
T 3snk_A 92 AVSDE 96 (135)
T ss_dssp EEESC
T ss_pred EEeCC
Confidence 55443
No 499
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=48.38 E-value=47 Score=25.59 Aligned_cols=64 Identities=9% Similarity=-0.119 Sum_probs=37.6
Q ss_pred ccccHHHHHHhcc----C--CcEEEEeCCHHHHHhcc--cc-c--CCCCCeEEEEccCCCCCCCCCCccEEEEcCCCCC
Q psy8015 34 TSNTKQSTTLPTF----I--PNSFNINVYYYLSGGPL--SS-T--IDPDHDYDLIADGRASFGDNGPYDAIHVGAAYPR 101 (165)
Q Consensus 34 ~GsG~~t~~la~~----~--~~V~aiD~~~~~~~~A~--~~-~--~~~~nV~~~~gD~~~~~~~~~~fD~I~i~~~~~~ 101 (165)
.|.|.++..++.. . .+|+.+|++++.++... +. . .-..++++...|. +. ....|+|++....+.
T Consensus 7 IGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~---~~~aDvViiav~~~~ 81 (309)
T 1hyh_A 7 IGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AA---LADADVVISTLGNIK 81 (309)
T ss_dssp ECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GG---GTTCSEEEECCSCGG
T ss_pred ECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH---hCCCCEEEEecCCcc
Confidence 4777777655543 2 47999999998775432 11 0 0112355544443 22 245899999876644
No 500
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=48.25 E-value=31 Score=25.55 Aligned_cols=73 Identities=7% Similarity=-0.086 Sum_probs=45.9
Q ss_pred CCCeEEEEccccHHHHHHhc----cCCcEEEEeCCHHHHHhcc--cccCCCCCeEEEEccCCCCC--C--------CC-C
Q psy8015 26 KRLDCLALTSNTKQSTTLPT----FIPNSFNINVYYYLSGGPL--SSTIDPDHDYDLIADGRASF--G--------DN-G 88 (165)
Q Consensus 26 ~~~~vLei~GsG~~t~~la~----~~~~V~aiD~~~~~~~~A~--~~~~~~~nV~~~~gD~~~~~--~--------~~-~ 88 (165)
.++++|=.-|+|.++..+++ ...+|+.++++++-++... ++..+ .++.++..|..+.- . .. +
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 86 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSSRSERQELMNTVANHFHG 86 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35666633566666655554 3568999999988766542 33333 36888899975420 0 01 5
Q ss_pred CccEEEEcCCC
Q psy8015 89 PYDAIHVGAAY 99 (165)
Q Consensus 89 ~fD~I~i~~~~ 99 (165)
+.|+++.+++.
T Consensus 87 ~id~lv~~Ag~ 97 (260)
T 2ae2_A 87 KLNILVNNAGI 97 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999988764
Done!