BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8023
(88 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P23506|PIMT_MOUSE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus
musculus GN=Pcmt1 PE=1 SV=3
Length = 227
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 57/84 (67%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M+A ALELL D L GAK LD+GSGSG LTACFA +VG++G+V ++ I E++ + N+
Sbjct: 64 MHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGNSGKVIGIDHIKELVDDSITNV 123
Query: 62 QQGNPELLPNIKFEPQTGEGDIQY 85
++ +P LL + + G+G + Y
Sbjct: 124 KKDDPMLLSSGRVRLVVGDGRMGY 147
>sp|P22061|PIMT_HUMAN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Homo
sapiens GN=PCMT1 PE=1 SV=4
Length = 227
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 56/84 (66%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M+A ALELL D L GAK LD+GSGSG LTACFA +VG G+V ++ I E++ + N+
Sbjct: 64 MHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNV 123
Query: 62 QQGNPELLPNIKFEPQTGEGDIQY 85
++ +P LL + + + G+G + Y
Sbjct: 124 RKDDPTLLSSGRVQLVVGDGRMGY 147
>sp|Q5RA89|PIMT_PONAB Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Pongo
abelii GN=PCMT1 PE=2 SV=3
Length = 227
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 56/84 (66%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M+A ALELL D L GAK LD+GSGSG LTACFA +VG G+V ++ I E++ + N+
Sbjct: 64 MHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNV 123
Query: 62 QQGNPELLPNIKFEPQTGEGDIQY 85
++ +P LL + + + G+G + Y
Sbjct: 124 RKDDPTLLSSGRVQLVVGDGRMGY 147
>sp|Q4R5H0|PIMT_MACFA Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Macaca
fascicularis GN=PCMT1 PE=2 SV=3
Length = 227
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 56/84 (66%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M+A ALELL D L GAK LD+GSGSG LTACFA +VG G+V ++ I E++ + N+
Sbjct: 64 MHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNV 123
Query: 62 QQGNPELLPNIKFEPQTGEGDIQY 85
++ +P LL + + + G+G + Y
Sbjct: 124 RKDDPTLLSSGRVQLVVGDGRMGY 147
>sp|Q5F3N1|PIMT_CHICK Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus
gallus GN=PCMT1 PE=2 SV=3
Length = 228
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M+A ALELL D L GAK LD+GSGSG LTACF+ +VG G+V ++ I E++ + N+
Sbjct: 64 MHAYALELLSDQLHEGAKALDVGSGSGILTACFSRMVGPKGQVVGIDHIKELVDDSINNV 123
Query: 62 QQGNPELLPNIKFEPQTGEGDIQY 85
++ +P LL + + + G+G + Y
Sbjct: 124 KKDDPTLLSSGRVKLIVGDGRMGY 147
>sp|P80895|PIMT_PIG Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus
scrofa GN=PCMT1 PE=1 SV=3
Length = 227
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 57/84 (67%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M+A ALELL D L GAK LD+GSGSG LTACFA +VG +G+V ++ I E++ + N+
Sbjct: 64 MHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNV 123
Query: 62 QQGNPELLPNIKFEPQTGEGDIQY 85
++ +P LL + + + G+G + Y
Sbjct: 124 RKDDPMLLSSGRVQLVVGDGRMGY 147
>sp|P15246|PIMT_BOVIN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos
taurus GN=PCMT1 PE=1 SV=2
Length = 227
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 57/84 (67%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M+A ALELL D L GAK LD+GSGSG LTACFA +VG +G+V ++ I E++ + N+
Sbjct: 64 MHAYALELLFDQLNEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNV 123
Query: 62 QQGNPELLPNIKFEPQTGEGDIQY 85
++ +P LL + + + G+G + Y
Sbjct: 124 RKDDPMLLSSGRVQLVVGDGRMGY 147
>sp|P22062|PIMT_RAT Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus
norvegicus GN=Pcmt1 PE=1 SV=2
Length = 227
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M+A ALELL D L GAK LD+GSGSG LTACFA +VG +G+V ++ I E++ + N+
Sbjct: 64 MHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGHSGKVIGIDHIKELVDDSITNV 123
Query: 62 QQGNPELLPNIKFEPQTGEGDIQY 85
++ +P LL + + G+G + +
Sbjct: 124 KKDDPMLLSSGRVRLVVGDGRMGF 147
>sp|Q42539|PIMT_ARATH Protein-L-isoaspartate O-methyltransferase OS=Arabidopsis thaliana
GN=PCM PE=2 SV=3
Length = 230
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 46/61 (75%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M+A L+LL+ +LKPG +VLD+GSG+GYLTACFA +VG+ G VE IPE++ + NI
Sbjct: 69 MHAMCLQLLEKHLKPGMRVLDVGSGTGYLTACFAVMVGTEGRAIGVEHIPELVASSVKNI 128
Query: 62 Q 62
+
Sbjct: 129 E 129
>sp|Q43209|PIMT_WHEAT Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum
GN=PCM PE=1 SV=1
Length = 230
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M+A LELLKD L+PG LD+GSGSGYLTACFA +VG G +E IPE++ + N+
Sbjct: 69 MHATCLELLKDYLQPGMHALDVGSGSGYLTACFAMMVGPEGRAVGIEHIPELVVASTENV 128
Query: 62 QQ 63
++
Sbjct: 129 ER 130
>sp|Q27873|PIMT_CAEEL Protein-L-isoaspartate O-methyltransferase OS=Caenorhabditis
elegans GN=pcm-1 PE=2 SV=1
Length = 225
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M+A AL+ L+++L GAK LD+GSGSGYLT C A +VG NG V +E +P++++ + NI
Sbjct: 64 MHAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSEKNI 123
Query: 62 QQGNPELL 69
++ + E L
Sbjct: 124 RKHHSEQL 131
>sp|Q92047|PIMT_DANRE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio
rerio GN=pcmt PE=2 SV=3
Length = 228
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M+A ALELL D+L GAK LD+GSGSG L+ CF+ +VG G+V ++ I E+++ + N+
Sbjct: 64 MHAYALELLHDHLYEGAKALDVGSGSGILSVCFSRMVGPTGKVIGIDHIKELVEDSIANV 123
Query: 62 QQGNPELLPNIKFEPQTGEGDIQY 85
++ +P L+ + + + G+G + +
Sbjct: 124 KKDDPSLITSGRIKLIVGDGRMGF 147
>sp|Q27869|PIMT_DROME Protein-L-isoaspartate(D-aspartate) O-methyltransferase
OS=Drosophila melanogaster GN=Pcmt PE=1 SV=2
Length = 226
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNG-----EVTAVELIPEVLQF 56
M+A ALE L+D+LKPGA++LD+GSGSGYLTACF + + G + +E E+++
Sbjct: 64 MHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRR 123
Query: 57 THYNIQQGNPELL 69
+ N+ + +L
Sbjct: 124 SKANLNTDDRSML 136
>sp|Q9GPS6|PIMT_DICDI Probable protein-L-isoaspartate O-methyltransferase
OS=Dictyostelium discoideum GN=pcmA PE=3 SV=1
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 2 MNARALELLKDNLKPGAKV-LDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYN 60
M+A L+LL D + V LDIGSGSGY+TAC L+G G V VE IPE+++ + +
Sbjct: 110 MHALMLDLLADRIPMSNGVALDIGSGSGYVTACLGHLMGCTGRVIGVEHIPELIERSIES 169
Query: 61 IQQGNPELLPNIKF 74
I++ + LL I+F
Sbjct: 170 IKRLDSTLLDRIQF 183
>sp|Q9URZ1|PIMT_SCHPO Probable protein-L-isoaspartate O-methyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pcm2 PE=3 SV=1
Length = 230
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M+A AL+ L+ L+PG LDIGSGSGYL A A +V NG V +E IP++++ + N+
Sbjct: 64 MHATALQELEPVLQPGCSALDIGSGSGYLVAAMARMVAPNGTVKGIEHIPQLVETSKKNL 123
>sp|Q9YDA1|PIMT_AERPE Protein-L-isoaspartate O-methyltransferase OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=pcm PE=3 SV=2
Length = 260
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
R L+LL + +PG KVLD+G+GSGY +A A+LV G V AVE IPE+ ++ N+++
Sbjct: 99 RMLQLL--DPQPGEKVLDVGAGSGYQSALLAELVTPGGRVYAVERIPELAEYARENLEK 155
>sp|Q8TYL4|PIMT_METKA Protein-L-isoaspartate O-methyltransferase OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pcm
PE=3 SV=1
Length = 226
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M A ELL + +PG KVL++G+GSGY A A+LV +G V VE IPE+ F N+
Sbjct: 70 MVAIMTELL--DPRPGHKVLEVGAGSGYHAAVVAELVKPDGRVITVERIPELADFARNNL 127
Query: 62 QQ 63
++
Sbjct: 128 KK 129
>sp|A0B9U1|PIMT_METTP Protein-L-isoaspartate O-methyltransferase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=pcm PE=3 SV=1
Length = 210
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQGN 65
+L+ G KVL++G G GY A A+LVG +G V +VE IPE+++ N+++
Sbjct: 67 DLREGMKVLEVGGGCGYHAAVMAELVGPSGHVYSVERIPELVEMARRNLERAR 119
>sp|A6UWM1|PIMT_META3 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=pcm PE=3
SV=1
Length = 216
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+LK G KVL+IG+GSGY A A++VG NG+V +E IPE+ +
Sbjct: 73 DLKEGDKVLEIGTGSGYHAAVVAEIVGKNGQVITIERIPELAE 115
>sp|Q57636|PIMT_METJA Protein-L-isoaspartate O-methyltransferase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=pcm PE=1 SV=1
Length = 215
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
+LKPG KVL+IG+G GY A A++VG +G V ++E IPE+ + +++
Sbjct: 74 DLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRK 124
>sp|Q12UV0|PIMT_METBU Protein-L-isoaspartate O-methyltransferase OS=Methanococcoides
burtonii (strain DSM 6242) GN=pcm PE=3 SV=1
Length = 203
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M A +LLK + G +L+IGSGSGY A A+L G NG+V VE IPE++ N+
Sbjct: 54 MVAIMCDLLK--ITEGMTILEIGSGSGYNAAVMAELAGENGKVYTVERIPELVDLARNNL 111
Query: 62 QQG 64
++
Sbjct: 112 ERA 114
>sp|A2BKH8|PIMT_HYPBU Protein-L-isoaspartate O-methyltransferase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=pcm PE=3 SV=1
Length = 241
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSN-------GEVTAVELIPEVLQFTHYNIQQG 64
+LKPG KVL++G+GSGY A A++V + G V +E IPE+ +F N+++
Sbjct: 82 DLKPGMKVLEVGAGSGYHAAVMAEVVAPSDEPREHWGHVYTIERIPELAEFARRNLERA 140
>sp|Q8TT94|PIMT2_METAC Protein-L-isoaspartate O-methyltransferase 2 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pcm2 PE=3 SV=1
Length = 238
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 14 LKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
L G KVL+IG+GSGY A A+LVG G + +VE I ++ F N++Q
Sbjct: 96 LSEGHKVLEIGTGSGYNAAVMAELVGKTGHIYSVERIEPLVNFARKNLEQ 145
>sp|O59534|PIMT_PYRHO Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=pcm PE=3 SV=2
Length = 220
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQG 64
+LKPG VL++G+GSG+ A A++V G+V ++E IPE+++F N+++
Sbjct: 78 DLKPGMNVLEVGTGSGWNAALIAEIV--KGDVYSIERIPELVEFAKRNLERA 127
>sp|O30199|PIMT1_ARCFU Protein-L-isoaspartate O-methyltransferase 1 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=pcm1 PE=3 SV=1
Length = 216
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
M A ELL +L+ G +VL+IG+G GY A A++VG G V +VE IPE+ + N+
Sbjct: 64 MVAIMCELL--DLREGERVLEIGTGCGYHAAVTAEIVGKRGLVVSVERIPELAEIAKRNL 121
Query: 62 Q 62
Sbjct: 122 S 122
>sp|Q4JBL7|CBIT_SULAC Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=cbiT PE=3 SV=1
Length = 192
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
R L L K L GAK LD+GSG+G ++ +VG G+V AVE P+ ++ T N+++
Sbjct: 25 RVLALSKARLFYGAKFLDVGSGTGSVSVEAGLIVGEKGKVYAVERDPQAVELTRKNVEK 83
>sp|A8AAV7|PIMT_IGNH4 Protein-L-isoaspartate O-methyltransferase OS=Ignicoccus hospitalis
(strain KIN4/I / DSM 18386 / JCM 14125) GN=pcm PE=3 SV=1
Length = 211
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQ 62
L+ G KVL++G+GSGY A A+LVG G V +E IPE+ + ++
Sbjct: 72 ELRRGDKVLEVGTGSGYHAAVMAELVGPEGHVYTIERIPELAERARERLK 121
>sp|O27962|PIMT2_ARCFU Protein-L-isoaspartate O-methyltransferase 2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=pcm2 PE=3 SV=1
Length = 219
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
M A ELL +L+ G KVL++G+G GY A A++VG +G+V ++E IPE+ +
Sbjct: 64 MVAIMCELL--DLREGDKVLEVGTGCGYHAAVTAEIVGKSGKVISIEYIPELAE 115
>sp|Q8TZR3|PIMT_PYRFU Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pcm
PE=1 SV=2
Length = 219
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQG 64
NLKPG +L++G+GSG+ A +++V ++ V +E IPE+++F N+++
Sbjct: 78 NLKPGMNILEVGTGSGWNAALISEIVKTD--VYTIERIPELVEFAKRNLERA 127
>sp|Q9HKE4|CBIT_THEAC Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Thermoplasma acidophilum (strain
ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=cbiT PE=3 SV=1
Length = 202
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQ 62
R + L ++PG +V+DIG GSG +T ++++G NG VT +++ E T N +
Sbjct: 34 RIISLSDLRIRPGMRVMDIGCGSGSMTVEISNIIGENGSVTGLDVSGEAADLTMRNCR 91
>sp|Q8TT93|PIMT1_METAC Protein-L-isoaspartate O-methyltransferase 1 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pcm1 PE=3 SV=1
Length = 251
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQGNPE 67
L G KVL+IG+GSGY A +LVG +G V VE I ++ F N+++ E
Sbjct: 111 ELSEGLKVLEIGAGSGYNAAVMGELVGKSGHVYTVERIEPLVDFARENLKKAGYE 165
>sp|A7HL14|PIMT_FERNB Protein-L-isoaspartate O-methyltransferase OS=Fervidobacterium
nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pcm
PE=3 SV=1
Length = 199
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 14 LKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
LK G +VL+IG+GSGY A + LVG +G + +E IPE++Q
Sbjct: 65 LKDGDRVLEIGTGSGYNAAVMSLLVGESGWIYTIERIPELVQ 106
>sp|A4G087|PIMT_METM5 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=pcm PE=3 SV=1
Length = 212
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+L G VL++G+GSGY A +++VG +G+VT +E IPE+ +
Sbjct: 73 DLDVGQNVLEVGTGSGYHAAVVSEIVGESGKVTTIERIPELFE 115
>sp|Q6M116|PIMT_METMP Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain S2 / LL) GN=pcm PE=3 SV=1
Length = 212
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+L G VL++G+GSGY A + +VG +G+VT +E IPE+ +
Sbjct: 73 DLDEGQNVLEVGTGSGYHAAVVSKIVGESGKVTTIERIPELFE 115
>sp|A9A8I9|PIMT_METM6 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=pcm PE=3 SV=1
Length = 212
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+L G VL++G+GSGY A + +VG +G+VT VE IPE+ +
Sbjct: 73 DLNMGQNVLEVGTGSGYQAAVVSKIVGESGKVTTVERIPELFE 115
>sp|Q96ZL5|CBIT_SULTO Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=cbiT PE=3 SV=1
Length = 192
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
R L L K L GAK +DIGSG+G +T +VG G+V A+E + ++ T N+++
Sbjct: 25 RVLALSKARLFDGAKFIDIGSGTGSVTVEAGLVVGEKGKVWAIEKDKDAVELTKKNVEK 83
>sp|B1YC47|PIMT_PYRNV Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum
neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta)
GN=pcm PE=3 SV=1
Length = 207
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 15 KPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
KPG K+L++G+GSGY A A+ + G V VE++ E+ + NI++
Sbjct: 71 KPGMKILEVGAGSGYQAAVCAEAMERRGRVYTVEIVKELAIYAAQNIER 119
>sp|A6VI91|PIMT_METM7 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=pcm PE=3 SV=1
Length = 212
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+L G VL++G+GSGY A +++VG +G VT +E IPE+ +
Sbjct: 73 DLDVGQNVLEVGTGSGYHAAVVSEIVGESGNVTTIERIPELFE 115
>sp|Q2T139|UBIE_BURTA Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia thailandensis (strain E264 / ATCC
700388 / DSM 13276 / CIP 106301) GN=ubiE PE=3 SV=1
Length = 243
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+A + + N++PG KVLDI +G+G LT FA G GEV ++ +L+
Sbjct: 47 KAFTIAQANVRPGGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLR 97
>sp|Q63XA0|UBIE_BURPS Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia pseudomallei (strain K96243) GN=ubiE
PE=3 SV=1
Length = 243
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+A + + N++PG KVLDI +G+G LT FA G GEV ++ +L+
Sbjct: 47 KAFTIAQANVRPGGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLR 97
>sp|A3N5U8|UBIE_BURP6 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia pseudomallei (strain 668) GN=ubiE PE=3
SV=1
Length = 243
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+A + + N++PG KVLDI +G+G LT FA G GEV ++ +L+
Sbjct: 47 KAFTIAQANVRPGGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLR 97
>sp|Q3JVZ6|UBIE_BURP1 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia pseudomallei (strain 1710b) GN=ubiE
PE=3 SV=1
Length = 243
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+A + + N++PG KVLDI +G+G LT FA G GEV ++ +L+
Sbjct: 47 KAFTIAQANVRPGGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLR 97
>sp|A3NRJ4|UBIE_BURP0 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia pseudomallei (strain 1106a) GN=ubiE
PE=3 SV=1
Length = 243
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+A + + N++PG KVLDI +G+G LT FA G GEV ++ +L+
Sbjct: 47 KAFTIAQANVRPGGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLR 97
>sp|A1V753|UBIE_BURMS Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia mallei (strain SAVP1) GN=ubiE PE=3 SV=1
Length = 243
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+A + + N++PG KVLDI +G+G LT FA G GEV ++ +L+
Sbjct: 47 KAFTIAQANVRPGGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLR 97
>sp|Q62MP4|UBIE_BURMA Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia mallei (strain ATCC 23344) GN=ubiE PE=3
SV=1
Length = 243
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+A + + N++PG KVLDI +G+G LT FA G GEV ++ +L+
Sbjct: 47 KAFTIAQANVRPGGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLR 97
>sp|A2S8L1|UBIE_BURM9 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia mallei (strain NCTC 10229) GN=ubiE PE=3
SV=1
Length = 243
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+A + + N++PG KVLDI +G+G LT FA G GEV ++ +L+
Sbjct: 47 KAFTIAQANVRPGGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLR 97
>sp|A3MNT8|UBIE_BURM7 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia mallei (strain NCTC 10247) GN=ubiE PE=3
SV=1
Length = 243
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+A + + N++PG KVLDI +G+G LT FA G GEV ++ +L+
Sbjct: 47 KAFTIAQANVRPGGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLR 97
>sp|A3MY16|PIMT_PYRCJ Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum
calidifontis (strain JCM 11548 / VA1) GN=pcm PE=3 SV=1
Length = 207
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 15 KPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
+PG K+L++G+GSGY A A+ + G+V VE++ E+ F N+++
Sbjct: 71 RPGMKILEVGTGSGYHAAVCAEAIERQGKVYTVEIVRELAIFAAQNLER 119
>sp|A1RSC6|PIMT_PYRIL Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum
islandicum (strain DSM 4184 / JCM 9189) GN=pcm PE=3 SV=1
Length = 207
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 15 KPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
+PG K+L++G+GSGY A A+ + G+V +E++ E+ + NI++
Sbjct: 71 RPGMKILEVGTGSGYQAAVCAEAIERKGKVYTIEIVKELAIYAAQNIER 119
>sp|Q7NJY2|PIMT_GLOVI Protein-L-isoaspartate O-methyltransferase OS=Gloeobacter violaceus
(strain PCC 7421) GN=pcm PE=3 SV=2
Length = 205
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
+ PGAKVL+IG+GSGY A A++ EV VE++PE+ + +++
Sbjct: 65 RITPGAKVLEIGTGSGYQAAVLAEM---GAEVYTVEIVPELAKRAERTLEE 112
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.137 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,643,105
Number of Sequences: 539616
Number of extensions: 1367935
Number of successful extensions: 5919
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 206
Number of HSP's that attempted gapping in prelim test: 5138
Number of HSP's gapped (non-prelim): 977
length of query: 88
length of database: 191,569,459
effective HSP length: 58
effective length of query: 30
effective length of database: 160,271,731
effective search space: 4808151930
effective search space used: 4808151930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)