RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8023
(88 letters)
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 55.6 bits (133), Expect = 2e-11
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
++ PG VL+ GSGSG ++ + VGS G V + E+ + N +
Sbjct: 95 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKH 145
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus
halodurans [TaxId: 86665]}
Length = 231
Score = 53.9 bits (128), Expect = 6e-11
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 4 ARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
A+ +++ LK +VLD+ +G G++ FA V +V A +L ++L+ I+
Sbjct: 5 AKLMQIA--ALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEG 59
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 264
Score = 53.8 bits (129), Expect = 8e-11
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQGNPELLPNI 72
++ PGA+VL+ G+GSG LT VG G+V + E + + N+ + N
Sbjct: 93 DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNW 152
Query: 73 KF 74
+
Sbjct: 153 RL 154
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 250
Score = 52.8 bits (126), Expect = 2e-10
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 9 LLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQF 56
+++ L+PG +L++G GSG +++ + G +T VE + L+
Sbjct: 78 IMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKK 125
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 224
Score = 51.8 bits (123), Expect = 3e-10
Identities = 37/81 (45%), Positives = 54/81 (66%)
Query: 1 MMNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYN 60
M+A ALELL D L GAK LD+GSGSG LTACFA +VG G+V ++ I E++ + N
Sbjct: 61 HMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNN 120
Query: 61 IQQGNPELLPNIKFEPQTGEG 81
+++ +P LL + + + G+G
Sbjct: 121 VRKDDPTLLSSGRVQLVVGDG 141
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus
subtilis [TaxId: 1423]}
Length = 234
Score = 49.6 bits (117), Expect = 3e-09
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 6 ALELLKD--NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
+L L+ + +VLDIG+G+G+ F+ V E V+ E+++ Q+
Sbjct: 4 SLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQE 60
>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 223
Score = 46.8 bits (110), Expect = 2e-08
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Query: 1 MMNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNG-----EVTAVELIPEVLQ 55
M+A ALE L+D+LKPGA++LD+GSGSGYLTACF + + G + +E E+++
Sbjct: 65 HMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVR 124
Query: 56 FTHYNIQQGNPELLPNIKFEPQTGEG 81
+ N+ + +L + + G+G
Sbjct: 125 RSKANLNTDDRSMLDSGQLLIVEGDG 150
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia
coli [TaxId: 562]}
Length = 245
Score = 45.3 bits (106), Expect = 9e-08
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 4 ARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
A +L+ +KPG ++LD+GSGSG + +A G T +++ ++
Sbjct: 23 ATLGRVLR--MKPGTRILDLGSGSGEMLCTWARDHGI--TGTGIDMSSLFTAQAKRRAEE 78
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus
cereus [TaxId: 1396]}
Length = 281
Score = 44.1 bits (103), Expect = 2e-07
Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Query: 3 NARALELLKDNL---KPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHY 59
N + L + + ++D G G GYL L+ + T ++ +L
Sbjct: 11 NDDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARE 70
Query: 60 NIQQ 63
+
Sbjct: 71 LFRL 74
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 230
Score = 43.6 bits (102), Expect = 3e-07
Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+ L+++ +K +K+L +G+ +G + AD+ G V A+E P +++
Sbjct: 65 KGLKVM--PIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMR 112
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus
horikoshii [TaxId: 53953]}
Length = 227
Score = 43.2 bits (101), Expect = 5e-07
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVL--------QFTHYNIQQG 64
+KPG VL +G SG + +D+VG G++ +E P VL + + G
Sbjct: 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILG 129
Query: 65 NPELLPNIKFEP 76
+ +
Sbjct: 130 DATKPEEYRALV 141
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738
{Erwinia carotovora [TaxId: 554]}
Length = 225
Score = 42.6 bits (99), Expect = 8e-07
Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 1 MMNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYN 60
+M+ + +PG +L++GS G T+ + ++T VE E +
Sbjct: 6 VMHPFMVRAFTPFFRPG-NLLELGSFKGDFTSRLQEH---FNDITCVEASEEAISHAQGR 61
Query: 61 IQQ 63
++
Sbjct: 62 LKD 64
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 209
Score = 42.0 bits (98), Expect = 1e-06
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 4 ARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
A L+ + L+ +VL +G+ SG + AD+V G + AVE + +
Sbjct: 44 AMILKGHRLKLRGDERVLYLGAASGTTVSHLADIV-DEGIIYAVEYSAKPFE 94
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT)
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 186
Score = 41.7 bits (97), Expect = 1e-06
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 9/83 (10%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQG 64
R L + +D+G G+G +T A V A++ PE + T N+Q+
Sbjct: 22 RCLIMCLAEPGKNDVAVDVGCGTGGVTLELAG---RVRRVYAIDRNPEAISTTEMNLQRH 78
Query: 65 NPELLPNIKFEPQTGEGDIQYLL 87
L N+ EGD L
Sbjct: 79 G--LGDNVTLM----EGDAPEAL 95
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase
{Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Length = 252
Score = 41.1 bits (95), Expect = 3e-06
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 9 LLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQF 56
L++ K G VLD+G G G + GE V++ +
Sbjct: 17 LIRLYTKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSIND 62
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 40.7 bits (94), Expect = 4e-06
Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQG 64
+ + VLD+G G+G L+ A +V V+ + Q
Sbjct: 25 DFIYQNPH-IFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSEILYQAMDIIRLNK 81
Query: 65 N 65
Sbjct: 82 L 82
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga
maritima [TaxId: 2336]}
Length = 266
Score = 40.1 bits (93), Expect = 6e-06
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
++K G +++D G GSG + A A VGS+G+V A E E +
Sbjct: 100 DVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAK 142
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Human (Homo sapiens) [TaxId:
9606]}
Length = 328
Score = 40.2 bits (93), Expect = 7e-06
Identities = 11/89 (12%), Positives = 25/89 (28%), Gaps = 13/89 (14%)
Query: 4 ARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
A+ ++ + + +D+GSG G + + VE ++ ++
Sbjct: 141 AQMIDEI--KMTDDDLFVDLGSGVGQVV-LQVAAATNCKHHYGVEKADIPAKYAETMDRE 197
Query: 64 GNPEL------LPNIKFEPQTGEGDIQYL 86
+ E GD
Sbjct: 198 FRKWMKWYGKKHAEYTLE----RGDFLSE 222
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1,
PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 316
Score = 39.4 bits (91), Expect = 1e-05
Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQG 64
+L VLD+GSG+G L A +V +E
Sbjct: 30 HLFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECSSISDYAVKIVKANK 79
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 406
Score = 39.3 bits (91), Expect = 1e-05
Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Query: 4 ARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
+ + LK G +D+GSG G A G E++ + T ++
Sbjct: 206 SDVYQQC--QLKKGDTFMDLGSGVGNCVVQAALECGC-ALSFGCEIMDDASDLTILQYEE 262
Query: 64 GNPEL 68
Sbjct: 263 LKKRC 267
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase
{Pseudomonas syringae [TaxId: 317]}
Length = 201
Score = 38.9 bits (89), Expect = 1e-05
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFAD----LVGSNGEVTAVELIPEVLQFTHYNIQQGN 65
N+ PGA+VL G + + +VG+ AVE + QG+
Sbjct: 17 NVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGD 73
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 280
Score = 39.2 bits (90), Expect = 1e-05
Identities = 12/56 (21%), Positives = 19/56 (33%), Gaps = 5/56 (8%)
Query: 13 NLKPGAKVLDIGSGSGYLT-----ACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
+ K K+L IG G+G + A G VE E + + +
Sbjct: 37 DTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAK 92
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 39.1 bits (90), Expect = 2e-05
Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQG 64
A+ KD K VLD+G G+G L+ A V V++ + G
Sbjct: 28 NAIIQNKDLFK-DKIVLDVGCGTGILSMFAAKHGAK--HVIGVDMSSIIEMAKELVELNG 84
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 246
Score = 38.5 bits (88), Expect = 2e-05
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 5 RALELLKDNLKPGAKVLDIGSGSGYLTACFAD 36
+E +N LD+ G+G LT
Sbjct: 26 FIIEKCVENNLVFDDYLDLACGTGNLTENLCP 57
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO)
{Haemophilus influenzae [TaxId: 727]}
Length = 225
Score = 38.2 bits (87), Expect = 3e-05
Identities = 8/63 (12%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLT-ACFADLVGSNGEVTAVELIPEVLQFTHYN 60
+ L + + + V D+G G T + ++ N ++ ++ +++ +
Sbjct: 25 IITAIGMLAERFVTADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQH 84
Query: 61 IQQ 63
I
Sbjct: 85 IAA 87
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine
transferase {Human (Homo sapiens) [TaxId: 9606]}
Length = 278
Score = 36.0 bits (82), Expect = 2e-04
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
L+P VL++G G+G +T L+ +V A EL P ++ H +Q
Sbjct: 18 ALRPTDVVLEVGPGTGNMTVK---LLEKAKKVVACELDPRLVAELHKRVQG 65
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal
domain {Thermus aquaticus [TaxId: 271]}
Length = 223
Score = 34.7 bits (78), Expect = 5e-04
Identities = 14/73 (19%), Positives = 22/73 (30%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQGNPELLPNI 72
G +VL+ G F + G+ VE+ P+ L + LL
Sbjct: 16 EAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILADFLLWEP 75
Query: 73 KFEPQTGEGDIQY 85
G+ Y
Sbjct: 76 GEAFDLILGNPPY 88
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389
{Thermotoga maritima [TaxId: 2336]}
Length = 246
Score = 34.4 bits (77), Expect = 6e-04
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 1 MMNARALELLKDNLKPGAKVLDIGSGSGYLTACF 34
+ + L++ LK +VLD+G G+G +
Sbjct: 27 LYHRLIGSFLEEYLKNPCRVLDLGGGTGKWSLFL 60
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 292
Score = 34.2 bits (77), Expect = 8e-04
Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Query: 7 LELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQGNP 66
L LL+ +VLD+ G+G + + VT+V+ ++L++
Sbjct: 49 LGLLRQ--HGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRK 103
Query: 67 EL 68
E
Sbjct: 104 EP 105
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine
methyltransferase {Red algae (Galdieria sulphuraria)
[TaxId: 130081]}
Length = 282
Score = 34.0 bits (76), Expect = 0.001
Identities = 12/64 (18%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Query: 2 MNARALELLKD--NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHY 59
+ L L+ AK LD+G+G G G + + + P +
Sbjct: 51 TDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGV--SIDCLNIAPVQNKRNEE 108
Query: 60 NIQQ 63
Q
Sbjct: 109 YNNQ 112
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein
KsgA {Escherichia coli [TaxId: 562]}
Length = 252
Score = 33.7 bits (76), Expect = 0.001
Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 6/67 (8%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVEL---IPEVLQFTHYNIQQGNPELL 69
N + G +++IG G LT + ++T +EL + LQ + +
Sbjct: 18 NPQKGQAMVEIGPGLAALTEP---VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQ 74
Query: 70 PNIKFEP 76
+ F
Sbjct: 75 DAMTFNF 81
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 309
Score = 33.6 bits (76), Expect = 0.001
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 1 MMNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYN 60
+++ L+ + KVL++ +G + A G+ EVT V+ + + + N
Sbjct: 117 IVHWEWLKNAVETADRPLKVLNLFGYTGVAS-LVAAAAGA--EVTHVDASKKAIGWAKEN 173
Query: 61 IQQGNPE 67
E
Sbjct: 174 QVLAGLE 180
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 251
Score = 33.5 bits (75), Expect = 0.001
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 9 LLKDNLKPGAKVLDIGSGSGYLTACF 34
+D + +VLD+ G+G T
Sbjct: 34 FKEDAKREVRRVLDLACGTGIPTLEL 59
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB
{Salmonella typhimurium [TaxId: 90371]}
Length = 198
Score = 33.0 bits (74), Expect = 0.002
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 3 NARALELLKDNLKPGAKVLDIGSGSGYLTACFA 35
++ L K + PG + LD+G G+G + A
Sbjct: 19 HSDVLAAAKV-VAPG-RTLDLGCGNGRNSLYLA 49
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase
TM1293 {Thermotoga maritima [TaxId: 2336]}
Length = 208
Score = 32.8 bits (73), Expect = 0.003
Identities = 10/60 (16%), Positives = 18/60 (30%), Gaps = 8/60 (13%)
Query: 4 ARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
L+ +K L P + ++IG G+G VE + +
Sbjct: 25 LSELQAVKC-LLPEGRGVEIGVGTGRFAVPLK-------IKIGVEPSERMAEIARKRGVF 76
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia
coli [TaxId: 562]}
Length = 268
Score = 32.6 bits (73), Expect = 0.003
Identities = 16/85 (18%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Query: 1 MMNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYN 60
+ +A +L + VLDIG G GY T FAD +++ ++
Sbjct: 69 LRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADA-LPEITTFGLDVSKVAIKAAAKR 127
Query: 61 IQQGNPELLPNIKFEPQTGEGDIQY 85
Q + + + D
Sbjct: 128 YPQVTFCVASSHRLPFSDTSMDAII 152
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 260
Score = 32.4 bits (73), Expect = 0.004
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 10 LKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQ 62
+ KP V+D+ +G G+L+ A V +V A+E P +F NI
Sbjct: 101 MAKVAKPDELVVDMFAGIGHLSLPIA--VYGKAKVIAIEKDPYTFKFLVENIH 151
>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 229
Score = 31.9 bits (71), Expect = 0.006
Identities = 11/43 (25%), Positives = 14/43 (32%), Gaps = 3/43 (6%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
K G +V G FAD V VE+ +Q
Sbjct: 42 KGKSGLRVFFPLCGKAVEMKWFAD---RGHSVVGVEISELGIQ 81
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus
pneumoniae, Ermam [TaxId: 1313]}
Length = 245
Score = 31.0 bits (69), Expect = 0.009
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 13 NLKPGAKVLDIGSGSGYLT 31
NLK V +IG+G G+LT
Sbjct: 26 NLKETDTVYEIGTGKGHLT 44
>d1hksa_ a.4.5.22 (A:) Heat-shock transcription factor {Drosophila
melanogaster [TaxId: 7227]}
Length = 106
Score = 30.3 bits (68), Expect = 0.011
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 51 PEVLQFTHYNIQQGNPELLPNIK 73
+ ++F+H ++ +P LL IK
Sbjct: 82 RDEIEFSHPFFKRNSPFLLDQIK 104
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 226
Score = 30.9 bits (68), Expect = 0.013
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 8 ELLKDNLKPGAKVLDIGSGSGYLTACFA 35
LL +K KVLD+ G G +
Sbjct: 29 PLLMKYMKKRGKVLDLACGVGGFSFLLE 56
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 229
Score = 30.4 bits (67), Expect = 0.015
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 15 KPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
G +VL++G G + + E +E V Q
Sbjct: 52 SKGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQ 90
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase,
INMT {Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 30.4 bits (67), Expect = 0.016
Identities = 9/60 (15%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Query: 8 ELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQGNPE 67
+ G ++DIGSG A S ++T + + +++
Sbjct: 43 KTFGPGGLQGDTLIDIGSGPTIYQVLAAC--DSFQDITLSDFTDRNREELEKWLKKEPGA 100
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus
subtilis, Ermc' [TaxId: 1423]}
Length = 235
Score = 30.2 bits (67), Expect = 0.017
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPE---VLQFTHYNIQQGNPELL 69
L + +IGSG G+ T LV VTA+E+ + + +
Sbjct: 18 RLNEHDNIFEIGSGKGHFTLE---LVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNK 74
Query: 70 PNIKFE 75
++F+
Sbjct: 75 DILQFK 80
>d2oyra1 c.66.1.55 (A:1-250) Hypothetical protein YhiQ {Shigella
flexneri [TaxId: 623]}
Length = 250
Score = 30.0 bits (67), Expect = 0.020
Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 9/86 (10%)
Query: 4 ARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQ- 62
A+A+ + D V+D +G G A + V +E P V +
Sbjct: 79 AKAVGIKGD---YLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLAR 132
Query: 63 -QGNPELLPNIKFEPQTGEGD-IQYL 86
+ E+ ++ Q + L
Sbjct: 133 GYADAEIGGWLQERLQLIHASSLTAL 158
>d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM
{Methylobacillus flagellatus [TaxId: 405]}
Length = 395
Score = 30.0 bits (67), Expect = 0.026
Identities = 11/66 (16%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLV-GSNGEVTAVELIPEVLQFTHYNIQQ-GNPELLP 70
K++D G+ G A + G V +E LQ +++ +
Sbjct: 209 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFAS 268
Query: 71 NIKFEP 76
I
Sbjct: 269 RITVHG 274
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Sulfolobus tokodaii [TaxId: 111955]}
Length = 224
Score = 29.8 bits (66), Expect = 0.027
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 11 KDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
+ +L G KVL+IG+G GY TA A++V +V +VE+ ++ + +
Sbjct: 65 ELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSY 114
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa
(LmjF30.0810) {Leishmania major [TaxId: 5664]}
Length = 254
Score = 29.6 bits (65), Expect = 0.030
Identities = 8/55 (14%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Query: 9 LLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
+ ++ LD G+G G +T + + +E + +L+ +
Sbjct: 86 IASLPGHGTSRALDCGAGIGRITKNLLTKLYA--TTDLLEPVKHMLEEAKRELAG 138
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine
N-methyltransferase, PNMTase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 263
Score = 28.6 bits (63), Expect = 0.067
Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Query: 8 ELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQ 55
+ G ++DIGSG A + +T + + Q
Sbjct: 46 QTFATGEVSGRTLIDIGSGPTVYQLLSACSHFED--ITMTDFLEVNRQ 91
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538
{Streptococcus pyogenes [TaxId: 1314]}
Length = 152
Score = 28.7 bits (63), Expect = 0.068
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 16 PGAKVLDIGSGSGYLTACFA 35
G +VLD+ +GSG L
Sbjct: 14 NGGRVLDLFAGSGGLAIEAV 33
>d1ej0a_ c.66.1.2 (A:) RNA methyltransferase FtsJ {Escherichia
coli [TaxId: 562]}
Length = 180
Score = 28.3 bits (62), Expect = 0.089
Identities = 15/88 (17%), Positives = 34/88 (38%), Gaps = 8/88 (9%)
Query: 4 ARA----LELLK--DNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIP--EVLQ 55
+RA E+ + KPG V+D+G+ G + +G G + A +L+P ++
Sbjct: 4 SRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVG 63
Query: 56 FTHYNIQQGNPELLPNIKFEPQTGEGDI 83
+ ++ + + +
Sbjct: 64 VDFLQGDFRDELVMKALLERVGDSKVQV 91
>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA
methyltransferase Trm1 {Pyrococcus horikoshii [TaxId:
53953]}
Length = 375
Score = 28.4 bits (63), Expect = 0.094
Identities = 17/86 (19%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 1 MMNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYN 60
M R + ++ N+ VLD S +G + L EV ++ + + N
Sbjct: 30 MALNRDIVVVLLNILNPKIVLDALSATG-IRGIRFALETPAEEVWLNDISEDAYELMKRN 88
Query: 61 IQQ-GNPELLPNIKFEPQTGEGDIQY 85
+ + EL + GE I
Sbjct: 89 VMLNFDGELRESKGRAILKGEKTIVI 114
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 194
Score = 28.1 bits (61), Expect = 0.12
Identities = 7/28 (25%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 5 RALELLKDNL--KPGAKVLDIGSGSGYL 30
+ ++L +N+ +LD+G G G +
Sbjct: 39 KGTKILVENVVVDKDDDILDLGCGYGVI 66
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 322
Score = 28.1 bits (62), Expect = 0.13
Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 11 KDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQGNPELLP 70
KVLD+ G G +A F + + + +E + +F + + ++L
Sbjct: 38 TYKHPEELKVLDLYPGVGIQSAIFYNKYCPR-QYSLLEKRSSLYKFLNAKFEGSPLQILK 96
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 215
Score = 27.5 bits (60), Expect = 0.18
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 12 DNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQGNP 66
NLKPG +L++G+GSG+ A +++V +V +E IPE+++F N+++
Sbjct: 74 ANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGV 126
>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase
domain {Thermotoga maritima [TaxId: 2336]}
Length = 192
Score = 27.1 bits (59), Expect = 0.22
Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTH 58
M +E L + +LD G G + + + +++ EVL+
Sbjct: 11 MVREVIEFL--KPEDEKIILDCTVGEGGHSRAILE-HCPGCRIIGIDVDSEVLRIAE 64
>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836)
{Thermus thermophilus [TaxId: 274]}
Length = 254
Score = 27.1 bits (59), Expect = 0.24
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 1 MMNARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYN 60
AL+ L +L+PG KVLD+G+GSG L L G+ V++ P VL N
Sbjct: 105 ETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKL---GGKALGVDIDPMVLPQAEAN 161
Query: 61 IQQGNP 66
++
Sbjct: 162 AKRNGV 167
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 197
Score = 27.0 bits (59), Expect = 0.26
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 10 LKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQGN 65
N+ G V+D G+G+G L L VTA ++ P+ ++ N N
Sbjct: 43 NDGNIG-GRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCGGVN 95
>d2fcaa1 c.66.1.53 (A:10-213) tRNA
(guanine-N(7)-)-methyltransferase TrmB {Bacillus
subtilis [TaxId: 1423]}
Length = 204
Score = 26.8 bits (58), Expect = 0.31
Identities = 7/44 (15%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 20 VLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQ 63
+++G+G G + A + +EL V+ ++
Sbjct: 33 HIEVGTGKGQFISGMAKQ-NPDINYIGIELFKSVIVTAVQKVKD 75
>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase
{Yeast (Candida tropicalis) [TaxId: 5482]}
Length = 175
Score = 26.3 bits (56), Expect = 0.43
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 4 ARALELLKDNLKPGAKVLDIGSGSG 28
A+++E L D KP ++ G +
Sbjct: 142 AKSIETLYDGTKPLHELYQDGVANS 166
>d2p41a1 c.66.1.25 (A:8-264) An RNA cap
(nucleoside-2'-O-)-methyltransferase domain of RNA
polymerase NS5 {Dengue virus 2 [TaxId: 11060]}
Length = 257
Score = 26.4 bits (58), Expect = 0.49
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 11 KDNLKPGAKVLDIGSGSGYLT 31
++ + P KV+D+G G G +
Sbjct: 61 RNLVTPEGKVVDLGCGRGGWS 81
>d1yzha1 c.66.1.53 (A:8-211) tRNA
(guanine-N(7)-)-methyltransferase TrmB {Streptococcus
pneumoniae [TaxId: 1313]}
Length = 204
Score = 26.0 bits (56), Expect = 0.59
Identities = 7/53 (13%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 20 VLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQGNPELLPNI 72
+++GSG G + A + +++ VL + + + + +
Sbjct: 35 HVEVGSGKGAFVSGMA-KQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLL 86
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB
{Streptomyces purpurascens [TaxId: 1924]}
Length = 256
Score = 25.7 bits (55), Expect = 0.83
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNIQQGNPE 67
+ VLD+G G+G + A A + T VEL + G +
Sbjct: 78 DWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVELAGPAERARRRFADAGLAD 131
>d1eyea_ c.1.21.1 (A:) Dihydropteroate synthetase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 270
Score = 25.2 bits (54), Expect = 1.2
Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 7/58 (12%)
Query: 4 ARALELLKDNLKPGAKVLDIGSGSGYLTACFADLVGSNGEVTAVELIPEVLQFTHYNI 61
L + GA ++D+G G + A V E + V + + L +
Sbjct: 29 KHGLAMAAA----GAGIVDVG---GESSRPGATRVDPAVETSRVIPVVKELAAQGITV 79
>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4,
Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 280
Score = 25.3 bits (54), Expect = 1.3
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 2 MNARALELLKDNLKPGAKVLDIGSGSGYLT 31
L+ L +LKPG +LDIG G G
Sbjct: 40 KVDLNLDKL--DLKPGMTLLDIGCGWGTTM 67
>d1muga_ c.18.1.2 (A:) G:T/U mismatch-specific DNA glycosylase,
Mug {Escherichia coli [TaxId: 562]}
Length = 165
Score = 24.6 bits (53), Expect = 1.7
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 9 LLKDNLKPGAKVLDIGSGSG 28
+++D L PG +V+ G G
Sbjct: 1 MVEDILAPGLRVVFCGINPG 20
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide
dehydrogenase {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 233
Score = 24.6 bits (52), Expect = 2.1
Identities = 6/32 (18%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Query: 19 KVLDIGSGSGYLTACF--ADLVGSNGEVTAVE 48
+++ +G G A A +VT ++
Sbjct: 3 RIVILGGGPAGYEAALVAATSHPETTQVTVID 34
>d1f6ya_ c.1.21.2 (A:) Methyltetrahydrofolate:
corrinoid/iron-sulfur protein methyltransferase MetR
{Moorella thermoacetica [TaxId: 1525]}
Length = 262
Score = 24.3 bits (52), Expect = 2.3
Identities = 7/28 (25%), Positives = 11/28 (39%)
Query: 4 ARALELLKDNLKPGAKVLDIGSGSGYLT 31
A E + + GA+ LD+ G
Sbjct: 25 APVQEWARRQEEGGARALDLNVGPAVQD 52
>d2jfga3 c.72.2.1 (A:94-297)
UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
{Escherichia coli [TaxId: 562]}
Length = 204
Score = 24.3 bits (51), Expect = 2.3
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 39 GSNGEVTAVELIPEVLQFTHYNIQQGNP 66
GSNG+ T L+ E+ + N+ G
Sbjct: 18 GSNGKSTVTTLVGEMAKAAGVNVGVGGN 45
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 295
Score = 24.1 bits (51), Expect = 2.6
Identities = 4/20 (20%), Positives = 11/20 (55%)
Query: 4 ARALELLKDNLKPGAKVLDI 23
+ + + +KPG +++I
Sbjct: 68 RQVRKYVMSWIKPGMTMIEI 87
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 195
Score = 24.0 bits (51), Expect = 3.0
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 9 LLKDNLKPGAKVLDIGSGSGYLTACFA 35
+ + PG+ V G+G L A +
Sbjct: 18 AVTAGVGPGSTVYVAGAGPVGLAAAAS 44
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol
dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 171
Score = 23.7 bits (50), Expect = 3.4
Identities = 6/23 (26%), Positives = 9/23 (39%)
Query: 13 NLKPGAKVLDIGSGSGYLTACFA 35
+ G KVL G+G +
Sbjct: 23 GVTLGHKVLVCGAGPIGMVTLLV 45
>d1ajza_ c.1.21.1 (A:) Dihydropteroate synthetase {Escherichia
coli [TaxId: 562]}
Length = 282
Score = 23.6 bits (50), Expect = 5.1
Identities = 7/31 (22%), Positives = 12/31 (38%), Gaps = 4/31 (12%)
Query: 4 ARALELLKDNLKPGAKVLDIGSGSGYLTACF 34
A ++ GA ++D+G S A
Sbjct: 42 KHANLMINA----GATIIDVGGESTRPGAAE 68
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria
monocytogenes [TaxId: 1639]}
Length = 328
Score = 23.0 bits (48), Expect = 7.7
Identities = 5/47 (10%), Positives = 14/47 (29%), Gaps = 4/47 (8%)
Query: 13 NLKPGAKVLDIGSGSG----YLTACFADLVGSNGEVTAVELIPEVLQ 55
K +LD G+ + + + V++ ++
Sbjct: 114 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLIS 160
>d1ewka_ c.93.1.1 (A:) Metabotropic glutamate receptor subtype 1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 477
Score = 23.0 bits (48), Expect = 8.1
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 65 NPELLPNIK 73
+P LLPNI
Sbjct: 57 DPVLLPNIT 65
>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}
Length = 172
Score = 22.4 bits (47), Expect = 9.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 30 LTACFADLVGSNGEVTAVEL 49
L FA + G +G++ A EL
Sbjct: 9 LYGYFAAVAGQDGQIDADEL 28
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.137 0.392
Gapped
Lambda K H
0.267 0.0559 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 325,969
Number of extensions: 13134
Number of successful extensions: 117
Number of sequences better than 10.0: 1
Number of HSP's gapped: 117
Number of HSP's successfully gapped: 79
Length of query: 88
Length of database: 2,407,596
Length adjustment: 53
Effective length of query: 35
Effective length of database: 1,679,906
Effective search space: 58796710
Effective search space used: 58796710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 47 (22.3 bits)