BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8027
(250 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P62944|AP2B1_RAT AP-2 complex subunit beta OS=Rattus norvegicus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 295 bits (755), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 137/245 (55%), Positives = 182/245 (74%), Gaps = 16/245 (6%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+ + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 707 YVAPKAVWLPAVKAKGLEISGTFTHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 759
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 760 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 819
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + L AD + S+++
Sbjct: 820 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKECHLNADTVSSKLQN 870
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 871 NNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQV 930
Query: 242 YDAIL 246
YD+IL
Sbjct: 931 YDSIL 935
>sp|Q9DBG3|AP2B1_MOUSE AP-2 complex subunit beta OS=Mus musculus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 295 bits (755), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 137/245 (55%), Positives = 182/245 (74%), Gaps = 16/245 (6%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+ + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 707 YVAPKAVWLPAVKAKGLEISGTFTHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 759
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 760 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 819
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + L AD + S+++
Sbjct: 820 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKECHLNADTVSSKLQN 870
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 871 NNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQV 930
Query: 242 YDAIL 246
YD+IL
Sbjct: 931 YDSIL 935
>sp|P63010|AP2B1_HUMAN AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1 PE=1 SV=1
Length = 937
Score = 295 bits (755), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 137/245 (55%), Positives = 182/245 (74%), Gaps = 16/245 (6%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+ + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 707 YVAPKAVWLPAVKAKGLEISGTFTHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 759
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 760 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 819
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + L AD + S+++
Sbjct: 820 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKECHLNADTVSSKLQN 870
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 871 NNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQV 930
Query: 242 YDAIL 246
YD+IL
Sbjct: 931 YDSIL 935
>sp|Q08DS7|AP1B1_BOVIN AP-1 complex subunit beta-1 OS=Bos taurus GN=AP2B1 PE=2 SV=1
Length = 951
Score = 295 bits (754), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 137/245 (55%), Positives = 182/245 (74%), Gaps = 16/245 (6%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+ + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 721 YVAPKAVWLPAVKAKGLEISGTFTHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 773
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 774 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 833
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + L AD + S+++
Sbjct: 834 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKECHLNADTVSSKLQN 884
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 885 NNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQV 944
Query: 242 YDAIL 246
YD+IL
Sbjct: 945 YDSIL 949
>sp|P63009|AP2B1_BOVIN AP-2 complex subunit beta OS=Bos taurus GN=AP2B1 PE=1 SV=2
Length = 937
Score = 295 bits (754), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 137/245 (55%), Positives = 182/245 (74%), Gaps = 16/245 (6%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+ + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 707 YVAPKAVWLPAVKAKGLEISGTFTHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 759
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 760 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 819
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + L AD + S+++
Sbjct: 820 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKECHLNADTVSSKLQN 870
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 871 NNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQV 930
Query: 242 YDAIL 246
YD+IL
Sbjct: 931 YDSIL 935
>sp|Q10567|AP1B1_HUMAN AP-1 complex subunit beta-1 OS=Homo sapiens GN=AP1B1 PE=1 SV=2
Length = 949
Score = 285 bits (729), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/248 (54%), Positives = 183/248 (73%), Gaps = 19/248 (7%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+R+ +G I M+L TNK++ M +FAIQ N+
Sbjct: 716 YVAPKAVWLPAMKAKGLEISGTFTRQ-------VGSISMDLQLTNKALQVMTDFAIQFNR 768
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFGL PA PLQV +PL P+ +VE SLP++T G+V +MEPL NLQVAVKNN+DVFYF+ +
Sbjct: 769 NSFGLAPATPLQVHAPLSPNQTVEISLPLSTVGSVMKMEPLNNLQVAVKNNIDVFYFSTL 828
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
P+++ F+EDG+M+R+ FL TWK+IP +NE QF + + L A+A S+++
Sbjct: 829 YPLHILFVEDGKMDRQMFLATWKDIPNENE---------AQFQIRDCPLNAEAASSKLQS 879
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVT---LSLKSRSSDVAQDI 238
+N+FT+AKRNVEG+DMLYQSL+LTNGIWVL EL+IQPG+PS T LSLK R+ +V+Q +
Sbjct: 880 SNIFTVAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSCTDLELSLKCRAPEVSQHV 939
Query: 239 FHAYDAIL 246
+ AY+ IL
Sbjct: 940 YQAYETIL 947
>sp|P52303|AP1B1_RAT AP-1 complex subunit beta-1 OS=Rattus norvegicus GN=Ap1b1 PE=1 SV=1
Length = 949
Score = 282 bits (721), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/245 (55%), Positives = 178/245 (72%), Gaps = 16/245 (6%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+R+ +G I M+L TNK++ M +FAIQ N+
Sbjct: 719 YVAPKAVWLPAMKAKGLEISGTFTRQ-------VGSISMDLQLTNKALQVMTDFAIQFNR 771
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFGL PA PLQV +PL P+ +VE SLP+ T G+V +MEPL NLQVAVKNN+DVFYF+ +
Sbjct: 772 NSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEPLNNLQVAVKNNIDVFYFSTL 831
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
P++V F+EDG+M+R+ FL TWK+IP +NE QF + + L +A S+++
Sbjct: 832 YPLHVLFVEDGKMDRQMFLATWKDIPNENE---------AQFQIRDCPLNTEAASSKLQS 882
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
+N+FT+AKR VEG+DMLYQSL+LTNGIWVL EL+IQPG+PS TLSLK R+ +V+Q A
Sbjct: 883 SNIFTVAKRTVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSFTLSLKCRAPEVSQHDIQA 942
Query: 242 YDAIL 246
Y+ IL
Sbjct: 943 YETIL 947
>sp|O35643|AP1B1_MOUSE AP-1 complex subunit beta-1 OS=Mus musculus GN=Ap1b1 PE=1 SV=2
Length = 943
Score = 280 bits (716), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 134/245 (54%), Positives = 178/245 (72%), Gaps = 16/245 (6%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+R+ G I M+L TNK++ M +FAIQ N+
Sbjct: 713 YVAPKAVWLPAMKAKGLEISGTFTRQA-------GSISMDLQLTNKALQVMTDFAIQFNR 765
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFGL PA PLQV PL P+ +VE SLP+ T G+V +MEPL NLQVAVKNN+DVFYF+ +
Sbjct: 766 NSFGLAPAAPLQVHVPLSPNQTVEISLPLNTVGSVLKMEPLNNLQVAVKNNIDVFYFSTL 825
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
P++V F+EDG+M+R+ FL TWK+I +NE QF + + L +A ++++
Sbjct: 826 YPLHVLFVEDGKMDRQMFLATWKDIANENE---------AQFQIRDCPLNTEAASNKLQS 876
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
+N+FT+AKRNVEG+DMLYQSL+LTNGIWVL EL+IQPG+PS TLSLK R+ +V+Q ++ A
Sbjct: 877 SNIFTVAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSFTLSLKCRAPEVSQHVYQA 936
Query: 242 YDAIL 246
Y+ IL
Sbjct: 937 YETIL 941
>sp|O81742|APBLC_ARATH Beta-adaptin-like protein C OS=Arabidopsis thaliana GN=BETAC-AD
PE=1 SV=2
Length = 893
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 123/243 (50%), Gaps = 23/243 (9%)
Query: 10 LPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPA 69
LPA KG+G++I +R+ G + + N S + + F IQ NKNSFGL
Sbjct: 670 LPASKGQGLQISAQLTRQD-------GQVFYSMLLENNSQSLLDGFMIQFNKNSFGLAAV 722
Query: 70 RPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLD-VFYFACIVPINVYF 128
LQV PL P S +PM + + + LQVAVKNN V+YF + +N F
Sbjct: 723 GSLQV-PPLQPGASARTMMPMVLSQNMSTGSTSSVLQVAVKNNQQPVWYFEDKIVLNALF 781
Query: 129 MEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQF---TLTNIALGADAIVSRMKQNNVF 185
EDG MER TFL TWK +P NE Q +F T+T++ D + + +N+F
Sbjct: 782 SEDGRMERGTFLETWKSLPDSNE-------VQKEFPGITITSVESTLDLLAA----SNMF 830
Query: 186 TIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHAYDAI 245
IAKR +D+LY S ++ GI L EL G P + ++K+ + ++A F A + +
Sbjct: 831 FIAKRKNGNQDVLYLSAKVPRGIPFLIELTAIVGQPGLKCAVKTPTPEIAPLFFEAVEIL 890
Query: 246 LHA 248
A
Sbjct: 891 FKA 893
>sp|Q9SUS3|APBLB_ARATH Beta-adaptin-like protein B OS=Arabidopsis thaliana GN=BETAB-AD
PE=1 SV=1
Length = 894
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 123/246 (50%), Gaps = 17/246 (6%)
Query: 4 PPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNKNS 63
PP +PA G+G++I SRK G + + F N S + + F IQ NKN+
Sbjct: 665 PPLPVVVPASSGQGLQISAQLSRKD-------GQVFYSMLFENNSQSVLDGFMIQFNKNT 717
Query: 64 FGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLD-VFYFACIV 122
FGL A LQ+ PL P+ S LPM + P + LQVAVKNN V+YF +
Sbjct: 718 FGLAAAGSLQI-PPLHPATSARTMLPMVLFQNMSAGPPSSLLQVAVKNNQQPVWYFTDKI 776
Query: 123 PINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQN 182
++ F EDG MER TFL TW+ +P D N + T+T++ ++ + +
Sbjct: 777 ILHALFGEDGRMERGTFLETWRSLP----DSNEVLKEFPGITITSV----ESTIELLTAF 828
Query: 183 NVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHAY 242
N+F IAKR +D++Y S + + L EL G P + ++K+ + ++A F A
Sbjct: 829 NMFFIAKRKNGNQDVIYLSAKDPRDVPFLIELTAMVGQPGLKCAVKTPTPEIAPLFFEAL 888
Query: 243 DAILHA 248
+ + A
Sbjct: 889 ELLFKA 894
>sp|Q54X82|AP1B_DICDI AP-1 complex subunit beta OS=Dictyostelium discoideum GN=ap1b1 PE=3
SV=1
Length = 942
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 115/237 (48%), Gaps = 15/237 (6%)
Query: 12 AEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARP 71
++ + ++I G F+R G I +EL N S M+ F IQ +NSFG++PA
Sbjct: 717 GDRSQAIQISGAFTRFQ-------GRINLELNLLNTSQQGMSKFKIQFYQNSFGISPADQ 769
Query: 72 LQVMSPLLPSLSVEASLPMATTGAVQR-MEPLTNLQVAVKNNLDVFYFACIVPINVYFME 130
+ + S + ++P++ G + + P+ ++ + V + + FYF P+ E
Sbjct: 770 ILSCGAIEVGQSTDVTIPISCNGQISNPLNPVIDMAMMVLPSQERFYFKMNFPLLCLLTE 829
Query: 131 DGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQNNVFTIAKR 190
G ++R+++L+ WK IP NE ++Q L ++ D+I+ R+ N+F I ++
Sbjct: 830 TGRLDRESYLSMWKSIPESNERS-----VEIQVRLPHV--DVDSILRRLNSKNIFEIVRK 882
Query: 191 NVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHAYDAILH 247
+++ + S + + +++L EL + S K+ S D+ H + +++
Sbjct: 883 KAPNQEISFLSCKTESSVYILIELAFNISTNTCRCSSKTTSPDIMALFEHNLNLLIN 939
>sp|A9VT67|HSLU_BACWK ATP-dependent protease ATPase subunit HslU OS=Bacillus
weihenstephanensis (strain KBAB4) GN=hslU PE=3 SV=1
Length = 463
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 31 ATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
AT GI E+ F+++++ +A A QVN+++ + R VM LL LS EAS
Sbjct: 380 ATEGI-----EIEFSDEAIRKIAEIAYQVNQDTDNIGARRLHTVMEKLLEDLSFEAS 431
>sp|B9IVB8|HSLU_BACCQ ATP-dependent protease ATPase subunit HslU OS=Bacillus cereus
(strain Q1) GN=hslU PE=3 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 31 ATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
AT GI E+ F+++++ +A A QVN+++ + R +M LL LS EAS
Sbjct: 380 ATEGI-----EIEFSDEAIRKIAEIAYQVNQDTDNIGARRLHTIMEKLLEDLSFEAS 431
>sp|B7HLG2|HSLU_BACC7 ATP-dependent protease ATPase subunit HslU OS=Bacillus cereus
(strain AH187) GN=hslU PE=3 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 31 ATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
AT GI E+ F+++++ +A A QVN+++ + R +M LL LS EAS
Sbjct: 380 ATEGI-----EIEFSDEAIRKIAEIAYQVNQDTDNIGARRLHTIMEKLLEDLSFEAS 431
>sp|C1EP53|HSLU_BACC3 ATP-dependent protease ATPase subunit HslU OS=Bacillus cereus
(strain 03BB102) GN=hslU PE=3 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 31 ATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
AT GI E+ F+++++ +A A QVN+++ + R +M LL LS EAS
Sbjct: 380 ATEGI-----EIEFSDEAIRKIAEIAYQVNQDTDNIGARRLHTIMEKLLEDLSFEAS 431
>sp|B7IUI8|HSLU_BACC2 ATP-dependent protease ATPase subunit HslU OS=Bacillus cereus
(strain G9842) GN=hslU PE=3 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 31 ATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
AT GI E+ F+++++ +A A QVN+++ + R +M LL LS EAS
Sbjct: 380 ATEGI-----EIEFSDEAIRKIAEIAYQVNQDTDNIGARRLHTIMEKLLEDLSFEAS 431
>sp|Q6HEY6|HSLU_BACHK ATP-dependent protease ATPase subunit HslU OS=Bacillus
thuringiensis subsp. konkukian (strain 97-27) GN=hslU
PE=3 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 31 ATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
AT GI E+ F+++++ +A A QVN+++ + R +M LL LS EAS
Sbjct: 380 ATEGI-----EIEFSDEAIRKIAEIAYQVNQDTDNIGARRLHTIMEKLLEDLSFEAS 431
>sp|Q636J7|HSLU_BACCZ ATP-dependent protease ATPase subunit HslU OS=Bacillus cereus
(strain ZK / E33L) GN=hslU PE=3 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 31 ATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
AT GI E+ F+++++ +A A QVN+++ + R +M LL LS EAS
Sbjct: 380 ATEGI-----EIEFSDEAIRKIAEIAYQVNQDTDNIGARRLHTIMEKLLEDLSFEAS 431
>sp|B7JJA7|HSLU_BACC0 ATP-dependent protease ATPase subunit HslU OS=Bacillus cereus
(strain AH820) GN=hslU PE=3 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 31 ATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
AT GI E+ F+++++ +A A QVN+++ + R +M LL LS EAS
Sbjct: 380 ATEGI-----EIEFSDEAIRKIAEIAYQVNQDTDNIGARRLHTIMEKLLEDLSFEAS 431
>sp|Q81WK6|HSLU_BACAN ATP-dependent protease ATPase subunit HslU OS=Bacillus anthracis
GN=hslU PE=3 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 31 ATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
AT GI E+ F+++++ +A A QVN+++ + R +M LL LS EAS
Sbjct: 380 ATEGI-----EIEFSDEAIRKIAEIAYQVNQDTDNIGARRLHTIMEKLLEDLSFEAS 431
>sp|C3L798|HSLU_BACAC ATP-dependent protease ATPase subunit HslU OS=Bacillus anthracis
(strain CDC 684 / NRRL 3495) GN=hslU PE=3 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 31 ATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
AT GI E+ F+++++ +A A QVN+++ + R +M LL LS EAS
Sbjct: 380 ATEGI-----EIEFSDEAIRKIAEIAYQVNQDTDNIGARRLHTIMEKLLEDLSFEAS 431
>sp|C3P5N1|HSLU_BACAA ATP-dependent protease ATPase subunit HslU OS=Bacillus anthracis
(strain A0248) GN=hslU PE=3 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 31 ATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
AT GI E+ F+++++ +A A QVN+++ + R +M LL LS EAS
Sbjct: 380 ATEGI-----EIEFSDEAIRKIAEIAYQVNQDTDNIGARRLHTIMEKLLEDLSFEAS 431
>sp|Q819X7|HSLU_BACCR ATP-dependent protease ATPase subunit HslU OS=Bacillus cereus
(strain ATCC 14579 / DSM 31) GN=hslU PE=3 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 31 ATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
AT GI E+ F+++++ +A A QVN+++ + R +M LL LS EAS
Sbjct: 380 ATEGI-----EIEFSDEAIRKIAEIAYQVNQDTDNIGARRLHTIMEKLLEDLSFEAS 431
>sp|B7HDV2|HSLU_BACC4 ATP-dependent protease ATPase subunit HslU OS=Bacillus cereus
(strain B4264) GN=hslU PE=3 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 31 ATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
AT GI E+ F+++++ +A A QVN+++ + R +M LL LS EAS
Sbjct: 380 ATEGI-----EIEFSDEAIRKIAEIAYQVNQDTDNIGARRLHTIMEKLLEDLSFEAS 431
>sp|A7GRF9|HSLU_BACCN ATP-dependent protease ATPase subunit HslU OS=Bacillus cereus
subsp. cytotoxis (strain NVH 391-98) GN=hslU PE=3 SV=1
Length = 463
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 31 ATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
AT GI E+ F+++++ +A A QVN+++ + R +M LL LS EAS
Sbjct: 380 ATEGI-----EIEFSDEAIRKIAEIAYQVNQDTDNIGARRLHTIMEKLLEDLSFEAS 431
>sp|Q68X52|HSLU_RICTY ATP-dependent protease ATPase subunit HslU OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=hslU PE=3 SV=1
Length = 450
Score = 34.3 bits (77), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 35 IGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
IG E+ L FT+ ++ +A++AI VN + R ++ LL +S EAS
Sbjct: 366 IGTEEVHLEFTDSAIEKIADYAITVNLEVEDIGARRLHTILENLLEDISFEAS 418
>sp|Q9ZDK8|HSLU_RICPR ATP-dependent protease ATPase subunit HslU OS=Rickettsia prowazekii
(strain Madrid E) GN=hslU PE=3 SV=1
Length = 450
Score = 34.3 bits (77), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 35 IGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
IG E+ L FT+ ++ +A++AI VN + R ++ LL +S EAS
Sbjct: 366 IGTEEVHLEFTDAAIEKIADYAITVNLEVEDIGARRLHTILENLLEDISFEAS 418
>sp|Q7W216|HSLU_BORPA ATP-dependent protease ATPase subunit HslU OS=Bordetella
parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
GN=hslU PE=3 SV=1
Length = 444
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 35 IGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEASLPMATTG 94
+G +++L FT+ + +A A VN+ + + R VM LL LS +AS A +G
Sbjct: 360 LGTEDVKLEFTDDGIRRLAELAFSVNERTENIGARRLYTVMEKLLEELSFDAS---ANSG 416
Query: 95 AV 96
V
Sbjct: 417 EV 418
>sp|A0L3K1|HSLU_MAGSM ATP-dependent protease ATPase subunit HslU OS=Magnetococcus sp.
(strain MC-1) GN=hslU PE=3 SV=1
Length = 461
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 35 IGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEA 86
+GV +EL FT++ + +A A +VN+ + + R VM LL LS A
Sbjct: 377 MGVENIELVFTDEGIEALAEIATRVNETAENIGARRLHTVMEKLLDELSFSA 428
>sp|Q7WQZ4|HSLU_BORBR ATP-dependent protease ATPase subunit HslU OS=Bordetella
bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
GN=hslU PE=3 SV=1
Length = 444
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 35 IGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEASLPMATTG 94
+G +++L FT+ + +A A VN+ + + R VM LL LS +AS A +G
Sbjct: 360 LGTEDVKLEFTDDGIRRLAELAFSVNERTENIGARRLYTVMEKLLEELSFDAS---ANSG 416
Query: 95 AV 96
V
Sbjct: 417 EV 418
>sp|Q7VUJ9|HSLU_BORPE ATP-dependent protease ATPase subunit HslU OS=Bordetella pertussis
(strain Tohama I / ATCC BAA-589 / NCTC 13251) GN=hslU
PE=3 SV=1
Length = 444
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 35 IGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEASLPMATTG 94
+G +++L FT+ + +A A VN+ + + R VM LL LS +AS A +G
Sbjct: 360 LGTEDVKLEFTDDGIRRLAELAFSVNERTENIGARRLYTVMEKLLEELSFDAS---ANSG 416
Query: 95 AV 96
V
Sbjct: 417 EV 418
>sp|Q42806|KPYC_SOYBN Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1
Length = 511
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 142 TWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQNNVFTIAKRN 191
++K++P + GN I C TLT ++ DA R + N T+ +R
Sbjct: 128 SYKKLPVHLKPGNTILCSDGTITLTVLSCDPDAGTVRCRCENTATLGERK 177
>sp|B1YIA9|HSLU_EXIS2 ATP-dependent protease ATPase subunit HslU OS=Exiguobacterium
sibiricum (strain DSM 17290 / JCM 13490 / 255-15)
GN=hslU PE=3 SV=1
Length = 456
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 35 IGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEAS 87
+G ++ +TFT ++ +A A QVN + + R +M +L LS EA+
Sbjct: 372 LGAEQVHVTFTEDAIRQIARIAAQVNDETDNIGARRLYTIMERVLEELSFEAA 424
>sp|Q6ZMT9|DTHD1_HUMAN Death domain-containing protein 1 OS=Homo sapiens GN=DTHD1 PE=2
SV=3
Length = 781
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 11/77 (14%)
Query: 170 LGADAIVSRMKQNNVFTIAKRNVEGKDMLYQSLRLTN--GIW---VLNELKIQPGDPSVT 224
LG ++VS +K+ + FT+ K+ + K + + L G++ VL +LKIQP DP++
Sbjct: 292 LGIFSVVSCLKKES-FTVTKKGLALKSSMDSRISLNYPPGVFTSPVLVQLKIQPVDPALV 350
Query: 225 LSLKSRSSDVAQDIFHA 241
LK++ QD F++
Sbjct: 351 AHLKAQ-----QDTFYS 362
>sp|Q6PDK2|MLL2_MOUSE Histone-lysine N-methyltransferase MLL2 OS=Mus musculus GN=Mll2 PE=1
SV=2
Length = 5588
Score = 31.2 bits (69), Expect = 7.9, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 64 FGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRM 99
+GL+P RP V+ P P + SLP T GA QR+
Sbjct: 2562 YGLSPLRPASVLPPPAP----DGSLPYLTHGASQRV 2593
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,264,494
Number of Sequences: 539616
Number of extensions: 3549341
Number of successful extensions: 7727
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 7656
Number of HSP's gapped (non-prelim): 48
length of query: 250
length of database: 191,569,459
effective HSP length: 115
effective length of query: 135
effective length of database: 129,513,619
effective search space: 17484338565
effective search space used: 17484338565
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)