Your job contains 1 sequence.
>psy8027
MYTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVN
KNSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFAC
IVPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMK
QNNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFH
AYDAILHAPA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8027
(250 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BXC1 - symbol:AP2B1 "Uncharacterized protein"... 720 3.7e-71 1
UNIPROTKB|E1BY12 - symbol:AP2B1 "Uncharacterized protein"... 720 3.7e-71 1
UNIPROTKB|P63009 - symbol:AP2B1 "AP-2 complex subunit bet... 717 7.7e-71 1
UNIPROTKB|Q08DS7 - symbol:AP2B1 "AP-1 complex subunit bet... 717 7.7e-71 1
UNIPROTKB|E2RIV1 - symbol:AP2B1 "Uncharacterized protein"... 717 7.7e-71 1
UNIPROTKB|K7EJT8 - symbol:AP2B1 "AP-2 complex subunit bet... 717 7.7e-71 1
UNIPROTKB|P63010 - symbol:AP2B1 "AP-2 complex subunit bet... 717 7.7e-71 1
UNIPROTKB|Q7Z451 - symbol:AP2B1 "AP-2 complex subunit bet... 717 7.7e-71 1
UNIPROTKB|I3L6Y6 - symbol:AP2B1 "Uncharacterized protein"... 717 7.7e-71 1
MGI|MGI:1919020 - symbol:Ap2b1 "adaptor-related protein c... 717 7.7e-71 1
RGD|71048 - symbol:Ap2b1 "adaptor-related protein complex... 717 7.7e-71 1
UNIPROTKB|E2RRJ6 - symbol:AP1B1 "Uncharacterized protein"... 710 4.3e-70 1
UNIPROTKB|F1RFI2 - symbol:AP1B1 "Uncharacterized protein"... 706 1.1e-69 1
UNIPROTKB|F1MIF2 - symbol:AP1B1 "Uncharacterized protein"... 697 1.0e-68 1
UNIPROTKB|Q10567 - symbol:AP1B1 "AP-1 complex subunit bet... 693 2.7e-68 1
UNIPROTKB|I3LV02 - symbol:AP1B1 "Uncharacterized protein"... 693 2.7e-68 1
ZFIN|ZDB-GENE-030131-6564 - symbol:ap2b1 "adaptor-related... 689 7.2e-68 1
UNIPROTKB|F1NCI1 - symbol:AP1B1 "Uncharacterized protein"... 686 1.5e-67 1
RGD|2064 - symbol:Ap1b1 "adaptor-related protein complex ... 685 1.9e-67 1
UNIPROTKB|P52303 - symbol:Ap1b1 "AP-1 complex subunit bet... 685 1.9e-67 1
MGI|MGI:1096368 - symbol:Ap1b1 "adaptor protein complex A... 680 6.5e-67 1
ZFIN|ZDB-GENE-061025-1 - symbol:ap1b1 "adaptor-related pr... 674 2.8e-66 1
FB|FBgn0010380 - symbol:AP-1-2beta "Adaptor Protein compl... 660 8.5e-65 1
WB|WBGene00000160 - symbol:apb-1 species:6239 "Caenorhabd... 516 1.2e-48 1
UNIPROTKB|F1NCR9 - symbol:AP1B1 "Uncharacterized protein"... 466 2.3e-43 1
TAIR|locus:2117924 - symbol:AT4G23460 species:3702 "Arabi... 308 2.4e-26 1
UNIPROTKB|F1S182 - symbol:LOC100517121 "Uncharacterized p... 275 7.1e-23 1
DICTYBASE|DDB_G0279141 - symbol:ap1b1 "beta adaptin" spec... 231 4.6e-18 1
GENEDB_PFALCIPARUM|PFE1400c - symbol:PFE1400c "beta adapt... 225 2.0e-17 1
UNIPROTKB|Q8I3I6 - symbol:PFE1400c "Beta adaptin protein,... 225 2.0e-17 1
>UNIPROTKB|E1BXC1 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
EMBL:AADN02025947 EMBL:AADN02025948 EMBL:AADN02025949
IPI:IPI00821954 Ensembl:ENSGALT00000040164 ArrayExpress:E1BXC1
Uniprot:E1BXC1
Length = 938
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 140/246 (56%), Positives = 184/246 (74%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTFS + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 707 YVAPKSVWLPAVKAKGLEISGTFSHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 759
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 760 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 819
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGA-DAIVSRMK 180
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + + L A D + S+++
Sbjct: 820 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKDCHLNAADTVSSKLQ 870
Query: 181 QNNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFH 240
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 871 NNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQ 930
Query: 241 AYDAIL 246
AYDAIL
Sbjct: 931 AYDAIL 936
>UNIPROTKB|E1BY12 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:DCHLNAD EMBL:AADN02025947 EMBL:AADN02025948 EMBL:AADN02025949
IPI:IPI00591263 Ensembl:ENSGALT00000003347 ArrayExpress:E1BY12
Uniprot:E1BY12
Length = 952
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 140/246 (56%), Positives = 184/246 (74%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTFS + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 721 YVAPKSVWLPAVKAKGLEISGTFSHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 773
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 774 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 833
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGA-DAIVSRMK 180
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + + L A D + S+++
Sbjct: 834 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKDCHLNAADTVSSKLQ 884
Query: 181 QNNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFH 240
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 885 NNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQ 944
Query: 241 AYDAIL 246
AYDAIL
Sbjct: 945 AYDAIL 950
>UNIPROTKB|P63009 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9913 "Bos
taurus" [GO:0005215 "transporter activity" evidence=TAS]
[GO:0005905 "coated pit" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0005886
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0005905 GO:GO:0005215
UniGene:Bt.88309 HOGENOM:HOG000163270 HOVERGEN:HBG050515
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:M34177 IPI:IPI00845219 PIR:B35553
ProteinModelPortal:P63009 SMR:P63009 DIP:DIP-44826N STRING:P63009
Uniprot:P63009
Length = 937
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 137/245 (55%), Positives = 182/245 (74%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+ + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 707 YVAPKAVWLPAVKAKGLEISGTFTHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 759
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 760 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 819
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + L AD + S+++
Sbjct: 820 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKECHLNADTVSSKLQN 870
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 871 NNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQV 930
Query: 242 YDAIL 246
YD+IL
Sbjct: 931 YDSIL 935
>UNIPROTKB|Q08DS7 [details] [associations]
symbol:AP2B1 "AP-1 complex subunit beta-1" species:9913
"Bos taurus" [GO:0030665 "clathrin-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0006897 EMBL:BC123583 IPI:IPI00696360
RefSeq:NP_001068593.1 UniGene:Bt.88309 ProteinModelPortal:Q08DS7
SMR:Q08DS7 STRING:Q08DS7 PRIDE:Q08DS7 GeneID:282183 KEGG:bta:282183
CTD:163 eggNOG:COG5096 HOGENOM:HOG000163270 HOVERGEN:HBG050515
InParanoid:Q08DS7 KO:K11825 OrthoDB:EOG4PG607 NextBio:20806011
GO:GO:0030131 GO:GO:0030665 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 Uniprot:Q08DS7
Length = 951
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 137/245 (55%), Positives = 182/245 (74%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+ + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 721 YVAPKAVWLPAVKAKGLEISGTFTHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 773
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 774 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 833
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + L AD + S+++
Sbjct: 834 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKECHLNADTVSSKLQN 884
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 885 NNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQV 944
Query: 242 YDAIL 246
YD+IL
Sbjct: 945 YDSIL 949
>UNIPROTKB|E2RIV1 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 CTD:163 KO:K11825 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:DCHLNAD EMBL:AAEX03006623 RefSeq:XP_853723.1
ProteinModelPortal:E2RIV1 Ensembl:ENSCAFT00000028998 GeneID:480605
KEGG:cfa:480605 Uniprot:E2RIV1
Length = 951
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 137/245 (55%), Positives = 182/245 (74%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+ + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 721 YVAPKAVWLPAVKAKGLEISGTFTHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 773
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 774 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 833
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + L AD + S+++
Sbjct: 834 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKECHLNADTVSSKLQN 884
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 885 NNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQV 944
Query: 242 YDAIL 246
YD+IL
Sbjct: 945 YDSIL 949
>UNIPROTKB|K7EJT8 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911
EMBL:AC004134 Ensembl:ENST00000592545 Uniprot:K7EJT8
Length = 913
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 137/245 (55%), Positives = 182/245 (74%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+ + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 683 YVAPKAVWLPAVKAKGLEISGTFTHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 735
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 736 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 795
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + L AD + S+++
Sbjct: 796 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKECHLNADTVSSKLQN 846
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 847 NNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQV 906
Query: 242 YDAIL 246
YD+IL
Sbjct: 907 YDSIL 911
>UNIPROTKB|P63010 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0048268 "clathrin coat
assembly" evidence=IEA] [GO:0005905 "coated pit" evidence=IEA]
[GO:0030276 "clathrin binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=TAS] [GO:0030666 "endocytic vesicle membrane"
evidence=TAS] [GO:0030669 "clathrin-coated endocytic vesicle
membrane" evidence=TAS] [GO:0042059 "negative regulation of
epidermal growth factor receptor signaling pathway" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0050690 "regulation of defense response to virus
by virus" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_13685 InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 EMBL:M34175
GO:GO:0005829 GO:GO:0005886 Reactome:REACT_111045
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0007411 GO:GO:0007173 GO:GO:0048011 GO:GO:0006886
GO:GO:0050690 GO:GO:0016032 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030669 GO:GO:0019886 GO:GO:0008565
GO:GO:0007268 GO:GO:0005905 GO:GO:0005802 GO:GO:0048488
GO:GO:0007269 GO:GO:0048268 CTD:163 eggNOG:COG5096
HOGENOM:HOG000163270 HOVERGEN:HBG050515 KO:K11825 OrthoDB:EOG4PG607
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 GO:GO:0042059 PDB:2JKR PDB:2JKT PDBsum:2JKR
PDBsum:2JKT PDB:2VGL PDB:2XA7 PDBsum:2VGL PDBsum:2XA7 EMBL:AC006237
EMBL:CH471147 EMBL:BC006201 IPI:IPI00784156 IPI:IPI00784366
PIR:A35553 RefSeq:NP_001025177.1 RefSeq:NP_001273.1
UniGene:Hs.514819 PDB:1E42 PDB:2G30 PDB:2IV8 PDB:2IV9 PDBsum:1E42
PDBsum:2G30 PDBsum:2IV8 PDBsum:2IV9 ProteinModelPortal:P63010
SMR:P63010 DIP:DIP-33098N IntAct:P63010 MINT:MINT-256705
STRING:P63010 PhosphoSite:P63010 DMDM:51702211 PaxDb:P63010
PRIDE:P63010 DNASU:163 Ensembl:ENST00000262325
Ensembl:ENST00000312678 Ensembl:ENST00000537622 GeneID:163
KEGG:hsa:163 UCSC:uc002hjq.3 UCSC:uc002hjr.3 GeneCards:GC17P033914
HGNC:HGNC:563 HPA:CAB017631 MIM:601025 neXtProt:NX_P63010
PharmGKB:PA24854 OMA:DCHLNAD ChiTaRS:AP2B1 EvolutionaryTrace:P63010
GenomeRNAi:163 NextBio:653 ArrayExpress:P63010 Bgee:P63010
CleanEx:HS_AP2B1 Genevestigator:P63010 GermOnline:ENSG00000006125
Uniprot:P63010
Length = 937
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 137/245 (55%), Positives = 182/245 (74%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+ + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 707 YVAPKAVWLPAVKAKGLEISGTFTHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 759
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 760 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 819
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + L AD + S+++
Sbjct: 820 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKECHLNADTVSSKLQN 870
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 871 NNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQV 930
Query: 242 YDAIL 246
YD+IL
Sbjct: 931 YDSIL 935
>UNIPROTKB|Q7Z451 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 HOVERGEN:HBG050515
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:AC006237 EMBL:CH471147 UniGene:Hs.514819
HGNC:HGNC:563 ChiTaRS:AP2B1 EMBL:AC015911 EMBL:AC004134
EMBL:AY341427 IPI:IPI00790702 SMR:Q7Z451 STRING:Q7Z451
Ensembl:ENST00000538556 Uniprot:Q7Z451
Length = 880
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 137/245 (55%), Positives = 182/245 (74%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+ + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 650 YVAPKAVWLPAVKAKGLEISGTFTHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 702
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 703 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 762
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + L AD + S+++
Sbjct: 763 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKECHLNADTVSSKLQN 813
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 814 NNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQV 873
Query: 242 YDAIL 246
YD+IL
Sbjct: 874 YDSIL 878
>UNIPROTKB|I3L6Y6 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:DCHLNAD Ensembl:ENSSSCT00000025334 Uniprot:I3L6Y6
Length = 939
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 137/245 (55%), Positives = 182/245 (74%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+ + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 709 YVAPKAVWLPAVKAKGLEISGTFTHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 761
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 762 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 821
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + L AD + S+++
Sbjct: 822 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKECHLNADTVSSKLQN 872
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 873 NNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQV 932
Query: 242 YDAIL 246
YD+IL
Sbjct: 933 YDSIL 937
>MGI|MGI:1919020 [details] [associations]
symbol:Ap2b1 "adaptor-related protein complex 2, beta 1
subunit" species:10090 "Mus musculus" [GO:0005802 "trans-Golgi
network" evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030118 "clathrin coat" evidence=ISO] [GO:0030131 "clathrin
adaptor complex" evidence=ISO] [GO:0030276 "clathrin binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0048268 "clathrin coat assembly" evidence=ISO]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 MGI:MGI:1919020 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0005905 GO:GO:0005802 GO:GO:0048488 GO:GO:0007269
GO:GO:0048268 CTD:163 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 KO:K11825 OrthoDB:EOG4PG607 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348
GeneTree:ENSGT00530000063138 OMA:DCHLNAD ChiTaRS:AP2B1
EMBL:AK004975 EMBL:BC046772 IPI:IPI00119689 IPI:IPI00378063
RefSeq:NP_001030931.1 RefSeq:NP_082191.1 UniGene:Mm.39053
ProteinModelPortal:Q9DBG3 SMR:Q9DBG3 IntAct:Q9DBG3
MINT:MINT-1870047 STRING:Q9DBG3 PhosphoSite:Q9DBG3 PaxDb:Q9DBG3
PRIDE:Q9DBG3 Ensembl:ENSMUST00000018875 Ensembl:ENSMUST00000065692
GeneID:71770 KEGG:mmu:71770 UCSC:uc007kou.1 NextBio:334467
Bgee:Q9DBG3 CleanEx:MM_AP2B1 Genevestigator:Q9DBG3
GermOnline:ENSMUSG00000035152 Uniprot:Q9DBG3
Length = 937
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 137/245 (55%), Positives = 182/245 (74%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+ + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 707 YVAPKAVWLPAVKAKGLEISGTFTHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 759
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 760 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 819
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + L AD + S+++
Sbjct: 820 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKECHLNADTVSSKLQN 870
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 871 NNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQV 930
Query: 242 YDAIL 246
YD+IL
Sbjct: 931 YDSIL 935
>RGD|71048 [details] [associations]
symbol:Ap2b1 "adaptor-related protein complex 2, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030118 "clathrin coat" evidence=IDA] [GO:0030119
"AP-type membrane coat adaptor complex" evidence=TAS] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0030276 "clathrin
binding" evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=IMP;IPI] [GO:0048268 "clathrin coat assembly" evidence=IDA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 RGD:71048 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0032403
GO:GO:0008565 GO:GO:0005905 GO:GO:0005802 GO:GO:0030276
GO:GO:0030118 GO:GO:0048268 CTD:163 eggNOG:COG5096
HOGENOM:HOG000163270 HOVERGEN:HBG050515 KO:K11825 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348
GeneTree:ENSGT00530000063138 GO:GO:0030119 OMA:DCHLNAD EMBL:M34176
EMBL:M77246 IPI:IPI00231502 IPI:IPI00389753 PIR:C35553
RefSeq:NP_542150.1 RefSeq:XP_003750923.1 UniGene:Rn.56138 PDB:3H1Z
PDB:3HS9 PDBsum:3H1Z PDBsum:3HS9 ProteinModelPortal:P62944
SMR:P62944 MINT:MINT-122517 STRING:P62944 PhosphoSite:P62944
PRIDE:P62944 Ensembl:ENSRNOT00000013363 Ensembl:ENSRNOT00000013629
GeneID:100912146 GeneID:140670 KEGG:rno:100912146 KEGG:rno:140670
EvolutionaryTrace:P62944 NextBio:620655 ArrayExpress:P62944
Genevestigator:P62944 GermOnline:ENSRNOG00000009988 Uniprot:P62944
Length = 937
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 137/245 (55%), Positives = 182/245 (74%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+ + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 707 YVAPKAVWLPAVKAKGLEISGTFTHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 759
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQVAVKNN+DVFYF+C+
Sbjct: 760 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCL 819
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
+P+NV F+EDG+MER+ FL TWK+IP +NE +QF + L AD + S+++
Sbjct: 820 IPLNVLFVEDGKMERQVFLATWKDIPNENE---------LQFQIKECHLNADTVSSKLQN 870
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q I+
Sbjct: 871 NNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQV 930
Query: 242 YDAIL 246
YD+IL
Sbjct: 931 YDSIL 935
>UNIPROTKB|E2RRJ6 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 OMA:PGNPSCT GeneTree:ENSGT00530000063138
EMBL:AAEX03014791 EMBL:AAEX03014790 ProteinModelPortal:E2RRJ6
Ensembl:ENSCAFT00000019193 NextBio:20860135 Uniprot:E2RRJ6
Length = 939
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 137/245 (55%), Positives = 183/245 (74%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+R+ +G I M+L TNK++ M +FAIQ N+
Sbjct: 709 YVAPKAVWLPAMKAKGLEISGTFTRQ-------VGSISMDLQLTNKALQVMTDFAIQFNR 761
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFGL PA PLQV +PL P+ +VE SLP+ T G+V +MEPL NLQVAVKNN+DVFYF+ +
Sbjct: 762 NSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEPLNNLQVAVKNNIDVFYFSTL 821
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
P+++ F+EDG+M+R+ FL TWK+IP +NE QF + + L A+A+ SR++
Sbjct: 822 YPLHILFVEDGKMDRQMFLATWKDIPNENE---------AQFQIRDCPLNAEAVSSRLQS 872
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
+N+FT+AKRNVEG+DMLYQSL+LTNGIWVL EL+IQPG+PS TLSLK R+ +V+Q ++ A
Sbjct: 873 SNIFTVAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSFTLSLKCRAPEVSQHVYQA 932
Query: 242 YDAIL 246
Y+ IL
Sbjct: 933 YETIL 937
>UNIPROTKB|F1RFI2 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
EMBL:CU640468 Ensembl:ENSSSCT00000010934 Uniprot:F1RFI2
Length = 947
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 136/245 (55%), Positives = 183/245 (74%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+R+ +G I M+L TNK++ M +FAIQ N+
Sbjct: 717 YVAPKAVWLPAMKAKGLEISGTFTRQ-------VGSITMDLQLTNKALQVMTDFAIQFNR 769
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFGL PA PLQV +PL P+ +VE SLP+ T G+V +MEPL NLQVAVKNN+DVFYF+ +
Sbjct: 770 NSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEPLNNLQVAVKNNIDVFYFSTL 829
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
P+++ F+EDG+M+R+ FL TWK+IP +NE QF + + L A+A+ SR++
Sbjct: 830 YPLHILFVEDGKMDRQMFLATWKDIPNENE---------AQFQIRDCPLNAEAVSSRLQS 880
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
+N+FT+AKRNVEG+DMLYQSL+LTNGIWVL EL+IQPG+P+ TLSLK R+ +V+Q ++ A
Sbjct: 881 SNIFTVAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPNFTLSLKCRAPEVSQHVYQA 940
Query: 242 YDAIL 246
Y+ IL
Sbjct: 941 YETIL 945
>UNIPROTKB|F1MIF2 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:KECENAD EMBL:DAAA02045602 IPI:IPI00690120 UniGene:Bt.35586
Ensembl:ENSBTAT00000001576 Uniprot:F1MIF2
Length = 946
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 134/245 (54%), Positives = 182/245 (74%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+R+ G I M+L TNK++ M +FAIQ N+
Sbjct: 716 YVAPKAVWLPAMKAKGLEISGTFTRQA-------GTISMDLQLTNKALQVMTDFAIQFNR 768
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFGL PA PLQV +PL P+ +VE SLP++T G+V + EPL +LQVAVKNN+DVFYF+ +
Sbjct: 769 NSFGLAPAAPLQVHAPLSPTQTVEISLPLSTAGSVMKTEPLNSLQVAVKNNIDVFYFSTL 828
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
P+++ F+EDG+M+R+ FL TWK+IP +NE QF + + L A+A+ SR++
Sbjct: 829 YPLHILFVEDGKMDRQMFLATWKDIPNENE---------AQFQIRDCPLNAEAVSSRLQS 879
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
+N+FT+A+RNVEG+DMLYQSL+LTNGIWVL EL+IQPG+PS TLSLK R+ +V+Q ++ A
Sbjct: 880 SNIFTVARRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSFTLSLKCRAPEVSQHVYQA 939
Query: 242 YDAIL 246
Y+ IL
Sbjct: 940 YETIL 944
>UNIPROTKB|Q10567 [details] [associations]
symbol:AP1B1 "AP-1 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005215 "transporter activity"
evidence=TAS] [GO:0000139 "Golgi membrane" evidence=TAS]
[GO:0005765 "lysosomal membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006892 "post-Golgi vesicle-mediated
transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=TAS]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=TAS]
[GO:0032588 "trans-Golgi network membrane" evidence=TAS]
[GO:0050690 "regulation of defense response to virus by virus"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0005829 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006886 GO:GO:0000139 GO:GO:0050690 GO:GO:0016032
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0005765 GO:GO:0032588 GO:GO:0019886 GO:GO:0008565
Pathway_Interaction_DB:hnf3apathway GO:GO:0006897 GO:GO:0005215
GO:GO:0030659 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 OrthoDB:EOG4PG607 GO:GO:0030131 GO:GO:0030665
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 EMBL:L13939
EMBL:CT841508 EMBL:AC000041 EMBL:AC002059 EMBL:BC046242 EMBL:U36268
EMBL:U36250 EMBL:U36251 EMBL:U36252 EMBL:U36253 EMBL:U36254
EMBL:U36255 EMBL:U36256 EMBL:U36257 EMBL:U36258 EMBL:U36259
EMBL:U36260 EMBL:U36261 EMBL:U36262 EMBL:U36263 EMBL:U36264
EMBL:U36265 EMBL:U36266 EMBL:U36267 EMBL:AF379038 EMBL:AF379039
EMBL:L48038 IPI:IPI00328257 IPI:IPI00384489 IPI:IPI00413947
IPI:IPI00940292 PIR:I54360 RefSeq:NP_001118.3 RefSeq:NP_001159491.1
RefSeq:NP_663782.2 UniGene:Hs.368794 ProteinModelPortal:Q10567
SMR:Q10567 DIP:DIP-24207N IntAct:Q10567 STRING:Q10567
PhosphoSite:Q10567 DMDM:290457628 PaxDb:Q10567 PRIDE:Q10567
DNASU:162 Ensembl:ENST00000317368 Ensembl:ENST00000356015
Ensembl:ENST00000357586 Ensembl:ENST00000402502
Ensembl:ENST00000405198 Ensembl:ENST00000415447
Ensembl:ENST00000432560 GeneID:162 KEGG:hsa:162 UCSC:uc003afi.3
UCSC:uc003afj.3 CTD:162 GeneCards:GC22M029723 HGNC:HGNC:554
MIM:600157 neXtProt:NX_Q10567 PharmGKB:PA24844 InParanoid:Q10567
KO:K12392 OMA:PGNPSCT PhylomeDB:Q10567 ChiTaRS:AP1B1 GenomeRNAi:162
NextBio:647 ArrayExpress:Q10567 Bgee:Q10567 CleanEx:HS_AP1B1
Genevestigator:Q10567 GermOnline:ENSG00000100280 GO:GO:0016044
GO:GO:0006892 Uniprot:Q10567
Length = 949
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 136/248 (54%), Positives = 183/248 (73%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+R+ +G I M+L TNK++ M +FAIQ N+
Sbjct: 716 YVAPKAVWLPAMKAKGLEISGTFTRQ-------VGSISMDLQLTNKALQVMTDFAIQFNR 768
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFGL PA PLQV +PL P+ +VE SLP++T G+V +MEPL NLQVAVKNN+DVFYF+ +
Sbjct: 769 NSFGLAPATPLQVHAPLSPNQTVEISLPLSTVGSVMKMEPLNNLQVAVKNNIDVFYFSTL 828
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
P+++ F+EDG+M+R+ FL TWK+IP +NE QF + + L A+A S+++
Sbjct: 829 YPLHILFVEDGKMDRQMFLATWKDIPNENE---------AQFQIRDCPLNAEAASSKLQS 879
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVT---LSLKSRSSDVAQDI 238
+N+FT+AKRNVEG+DMLYQSL+LTNGIWVL EL+IQPG+PS T LSLK R+ +V+Q +
Sbjct: 880 SNIFTVAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSCTDLELSLKCRAPEVSQHV 939
Query: 239 FHAYDAIL 246
+ AY+ IL
Sbjct: 940 YQAYETIL 947
>UNIPROTKB|I3LV02 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:KECENAD EMBL:CU640468 Ensembl:ENSSSCT00000028355 Uniprot:I3LV02
Length = 949
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 136/248 (54%), Positives = 183/248 (73%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+R+ +G I M+L TNK++ M +FAIQ N+
Sbjct: 716 YVAPKAVWLPAMKAKGLEISGTFTRQ-------VGSITMDLQLTNKALQVMTDFAIQFNR 768
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFGL PA PLQV +PL P+ +VE SLP+ T G+V +MEPL NLQVAVKNN+DVFYF+ +
Sbjct: 769 NSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEPLNNLQVAVKNNIDVFYFSTL 828
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
P+++ F+EDG+M+R+ FL TWK+IP +NE QF + + L A+A+ SR++
Sbjct: 829 YPLHILFVEDGKMDRQMFLATWKDIPNENE---------AQFQIRDCPLNAEAVSSRLQS 879
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVT---LSLKSRSSDVAQDI 238
+N+FT+AKRNVEG+DMLYQSL+LTNGIWVL EL+IQPG+P+ T LSLK R+ +V+Q +
Sbjct: 880 SNIFTVAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPNFTDLELSLKCRAPEVSQHV 939
Query: 239 FHAYDAIL 246
+ AY+ IL
Sbjct: 940 YQAYETIL 947
>ZFIN|ZDB-GENE-030131-6564 [details] [associations]
symbol:ap2b1 "adaptor-related protein complex 2,
beta 1 subunit" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
ZFIN:ZDB-GENE-030131-6564 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
HOVERGEN:HBG050515 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 EMBL:BC049138 IPI:IPI00511115
UniGene:Dr.150746 ProteinModelPortal:Q7ZUF4 SMR:Q7ZUF4
ArrayExpress:Q7ZUF4 Uniprot:Q7ZUF4
Length = 951
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 133/245 (54%), Positives = 180/245 (73%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y K WLPA K KG+EI GTFSR+ G + M++TFTNK++ M +FAIQ NK
Sbjct: 721 YVAAKTVWLPAVKAKGLEISGTFSRRQ-------GHMYMDMTFTNKALQHMTDFAIQFNK 773
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFG+ P L V +PL+PS S++ SLP+ T G V +M+PL NLQVAVKNN+DVFYF+ +
Sbjct: 774 NSFGVIPTTLLPVHTPLMPSQSIDISLPLNTIGPVMKMDPLNNLQVAVKNNIDVFYFSTL 833
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
+P+NV+F+EDG+MER+ FL TWK+IP +NE +Q+ + + L AD + +++
Sbjct: 834 IPLNVFFVEDGKMERQVFLATWKDIPNENE---------LQYQIKDCHLNADTVSGKLQS 884
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NNV+TIAKRNVEG+DMLYQSL+LTNGIW+L EL+IQPG+P+ TLSLK R+ +V+Q ++
Sbjct: 885 NNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYVYQM 944
Query: 242 YDAIL 246
YDA L
Sbjct: 945 YDATL 949
>UNIPROTKB|F1NCI1 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 OMA:PGNPSCT
GeneTree:ENSGT00530000063138 EMBL:AADN02050473 EMBL:AADN02050474
EMBL:AADN02050475 IPI:IPI00820134 Ensembl:ENSGALT00000013205
Uniprot:F1NCI1
Length = 922
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 140/246 (56%), Positives = 181/246 (73%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTFSR+ +G I M+L TNK++ M++FAIQ N+
Sbjct: 692 YVAPKTVWLPAMKAKGLEISGTFSRQ-------VGSICMDLVLTNKALQVMSDFAIQFNR 744
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFGL PA PLQV +PL P+ SVE SLP+ T G+V +M+PL NLQVAVKNN+DVFYF+ +
Sbjct: 745 NSFGLAPAAPLQVHAPLAPNQSVEISLPLNTVGSVMKMDPLNNLQVAVKNNIDVFYFSTL 804
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVS-RMK 180
P+++ F+EDG+MER+ FL TWK+IP +NE QF + + +L A A+ S +
Sbjct: 805 YPLHILFVEDGKMERQMFLATWKDIPNENE---------AQFQIKDCSLNA-AVGSWELP 854
Query: 181 QNNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFH 240
N+FTIAKRNVEG+DMLYQSL+LTNGIWVL EL+IQP +PS TLSLK R+ +V+Q ++
Sbjct: 855 LXNIFTIAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPSNPSFTLSLKCRAPEVSQYVYQ 914
Query: 241 AYDAIL 246
AYDAIL
Sbjct: 915 AYDAIL 920
>RGD|2064 [details] [associations]
symbol:Ap1b1 "adaptor-related protein complex 1, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030118 "clathrin
coat" evidence=IC] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030276 "clathrin binding" evidence=IC] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0048268
"clathrin coat assembly" evidence=IDA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
RGD:2064 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0006897
GO:GO:0030276 GO:GO:0030118 GO:GO:0048268 eggNOG:COG5096
HOGENOM:HOG000163270 HOVERGEN:HBG050515 GO:GO:0030131 GO:GO:0030665
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 CTD:162 KO:K12392
EMBL:M77245 IPI:IPI00201713 IPI:IPI00781585 PIR:B32105
RefSeq:NP_058973.1 UniGene:Rn.37383 PDB:1W63 PDBsum:1W63
ProteinModelPortal:P52303 SMR:P52303 IntAct:P52303 MINT:MINT-1344522
STRING:P52303 PhosphoSite:P52303 PRIDE:P52303 GeneID:29663
KEGG:rno:29663 UCSC:RGD:2064 EvolutionaryTrace:P52303 NextBio:609967
ArrayExpress:P52303 Genevestigator:P52303
GermOnline:ENSRNOG00000008786 Uniprot:P52303
Length = 949
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 135/245 (55%), Positives = 178/245 (72%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+R+ +G I M+L TNK++ M +FAIQ N+
Sbjct: 719 YVAPKAVWLPAMKAKGLEISGTFTRQ-------VGSISMDLQLTNKALQVMTDFAIQFNR 771
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFGL PA PLQV +PL P+ +VE SLP+ T G+V +MEPL NLQVAVKNN+DVFYF+ +
Sbjct: 772 NSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEPLNNLQVAVKNNIDVFYFSTL 831
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
P++V F+EDG+M+R+ FL TWK+IP +NE QF + + L +A S+++
Sbjct: 832 YPLHVLFVEDGKMDRQMFLATWKDIPNENE---------AQFQIRDCPLNTEAASSKLQS 882
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
+N+FT+AKR VEG+DMLYQSL+LTNGIWVL EL+IQPG+PS TLSLK R+ +V+Q A
Sbjct: 883 SNIFTVAKRTVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSFTLSLKCRAPEVSQHDIQA 942
Query: 242 YDAIL 246
Y+ IL
Sbjct: 943 YETIL 947
>UNIPROTKB|P52303 [details] [associations]
symbol:Ap1b1 "AP-1 complex subunit beta-1" species:10116
"Rattus norvegicus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 RGD:2064 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0006897 GO:GO:0030276 GO:GO:0030118 GO:GO:0048268
eggNOG:COG5096 HOGENOM:HOG000163270 HOVERGEN:HBG050515
GO:GO:0030131 GO:GO:0030665 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 CTD:162 KO:K12392 EMBL:M77245 IPI:IPI00201713
IPI:IPI00781585 PIR:B32105 RefSeq:NP_058973.1 UniGene:Rn.37383
PDB:1W63 PDBsum:1W63 ProteinModelPortal:P52303 SMR:P52303
IntAct:P52303 MINT:MINT-1344522 STRING:P52303 PhosphoSite:P52303
PRIDE:P52303 GeneID:29663 KEGG:rno:29663 UCSC:RGD:2064
EvolutionaryTrace:P52303 NextBio:609967 ArrayExpress:P52303
Genevestigator:P52303 GermOnline:ENSRNOG00000008786 Uniprot:P52303
Length = 949
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 135/245 (55%), Positives = 178/245 (72%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+R+ +G I M+L TNK++ M +FAIQ N+
Sbjct: 719 YVAPKAVWLPAMKAKGLEISGTFTRQ-------VGSISMDLQLTNKALQVMTDFAIQFNR 771
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFGL PA PLQV +PL P+ +VE SLP+ T G+V +MEPL NLQVAVKNN+DVFYF+ +
Sbjct: 772 NSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEPLNNLQVAVKNNIDVFYFSTL 831
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
P++V F+EDG+M+R+ FL TWK+IP +NE QF + + L +A S+++
Sbjct: 832 YPLHVLFVEDGKMDRQMFLATWKDIPNENE---------AQFQIRDCPLNTEAASSKLQS 882
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
+N+FT+AKR VEG+DMLYQSL+LTNGIWVL EL+IQPG+PS TLSLK R+ +V+Q A
Sbjct: 883 SNIFTVAKRTVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSFTLSLKCRAPEVSQHDIQA 942
Query: 242 YDAIL 246
Y+ IL
Sbjct: 943 YETIL 947
>MGI|MGI:1096368 [details] [associations]
symbol:Ap1b1 "adaptor protein complex AP-1, beta 1 subunit"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=TAS] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0048268 "clathrin coat assembly"
evidence=ISO] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 MGI:MGI:1096368
GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 EMBL:CH466574
GO:GO:0006897 GO:GO:0005802 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 GO:GO:0030131 GO:GO:0030665 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 CTD:162 KO:K12392 OMA:PGNPSCT
ChiTaRS:AP1B1 EMBL:Y07919 EMBL:AK159273 EMBL:BC008513
IPI:IPI00346965 RefSeq:NP_031480.2 UniGene:Mm.274816
ProteinModelPortal:O35643 SMR:O35643 IntAct:O35643 STRING:O35643
PhosphoSite:O35643 PaxDb:O35643 PRIDE:O35643
Ensembl:ENSMUST00000009234 GeneID:11764 KEGG:mmu:11764
GeneTree:ENSGT00530000063138 NextBio:279521 Bgee:O35643
CleanEx:MM_AP1B1 Genevestigator:O35643 Uniprot:O35643
Length = 943
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 134/245 (54%), Positives = 178/245 (72%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+R+ G I M+L TNK++ M +FAIQ N+
Sbjct: 713 YVAPKAVWLPAMKAKGLEISGTFTRQA-------GSISMDLQLTNKALQVMTDFAIQFNR 765
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFGL PA PLQV PL P+ +VE SLP+ T G+V +MEPL NLQVAVKNN+DVFYF+ +
Sbjct: 766 NSFGLAPAAPLQVHVPLSPNQTVEISLPLNTVGSVLKMEPLNNLQVAVKNNIDVFYFSTL 825
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
P++V F+EDG+M+R+ FL TWK+I +NE QF + + L +A ++++
Sbjct: 826 YPLHVLFVEDGKMDRQMFLATWKDIANENE---------AQFQIRDCPLNTEAASNKLQS 876
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
+N+FT+AKRNVEG+DMLYQSL+LTNGIWVL EL+IQPG+PS TLSLK R+ +V+Q ++ A
Sbjct: 877 SNIFTVAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSFTLSLKCRAPEVSQHVYQA 936
Query: 242 YDAIL 246
Y+ IL
Sbjct: 937 YETIL 941
>ZFIN|ZDB-GENE-061025-1 [details] [associations]
symbol:ap1b1 "adaptor-related protein complex 1, beta
1 subunit" species:7955 "Danio rerio" [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 ZFIN:ZDB-GENE-061025-1 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 OrthoDB:EOG4PG607 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 CTD:162 KO:K12392
OMA:PGNPSCT GeneTree:ENSGT00530000063138 EMBL:BX664747
IPI:IPI00897502 RefSeq:NP_001122002.1 UniGene:Dr.31764 SMR:A5PMS9
Ensembl:ENSDART00000022518 Ensembl:ENSDART00000137128 GeneID:562166
KEGG:dre:562166 NextBio:20884280 Uniprot:A5PMS9
Length = 947
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 127/245 (51%), Positives = 183/245 (74%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK +LPA K KG+EI GTF+R+ G G+I+M+L+ TNK+M+ M +FAIQ N+
Sbjct: 717 YVAPKTLFLPAMKAKGLEISGTFARR------G-GIIQMDLSLTNKAMSVMTDFAIQFNR 769
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFGL PA PLQV++PL P+ +++ SLP+ TTG V +MEPL NLQVAVKNN+DVFYF+C
Sbjct: 770 NSFGLAPAGPLQVLTPLTPNQTIDVSLPLGTTGPVMKMEPLNNLQVAVKNNIDVFYFSCQ 829
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQ 181
P+++ F+EDG+MER+ FL TWK+IP NE QF + ++ L +DA ++++
Sbjct: 830 YPLSLLFVEDGKMERQVFLATWKDIPNDNE---------AQFQIKDVHLNSDAASNKLQG 880
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
+N+FTIAKR V+ +DMLYQS++LTNGIWVL E+++Q G+P+ TLS+K R+ +V+Q ++
Sbjct: 881 SNIFTIAKRTVDAQDMLYQSIKLTNGIWVLAEMRVQTGNPNYTLSIKCRAPEVSQFVYQC 940
Query: 242 YDAIL 246
Y+ +L
Sbjct: 941 YELVL 945
>FB|FBgn0010380 [details] [associations]
symbol:AP-1-2beta "Adaptor Protein complex 1/2, beta subunit"
species:7227 "Drosophila melanogaster" [GO:0005905 "coated pit"
evidence=IDA] [GO:0030119 "AP-type membrane coat adaptor complex"
evidence=IDA] [GO:0030121 "AP-1 adaptor complex" evidence=ISS;NAS]
[GO:0007269 "neurotransmitter secretion" evidence=NAS] [GO:0008021
"synaptic vesicle" evidence=TAS] [GO:0016183 "synaptic vesicle
coating" evidence=TAS] [GO:0006901 "vesicle coating" evidence=TAS]
[GO:0030135 "coated vesicle" evidence=TAS] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030136 "clathrin-coated vesicle"
evidence=IDA] [GO:0048749 "compound eye development" evidence=IMP]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0008021 EMBL:AE014298
GO:GO:0005905 GO:GO:0007269 eggNOG:COG5096 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 KO:K12392
GeneTree:ENSGT00530000063138 OMA:YDISATM GO:GO:0030119
GO:GO:0016183 GO:GO:0048749 EMBL:BT016054 EMBL:X75910 PIR:S39295
RefSeq:NP_523415.1 UniGene:Dm.2885 SMR:Q24253 DIP:DIP-20749N
IntAct:Q24253 MINT:MINT-316769 STRING:Q24253
EnsemblMetazoa:FBtr0074789 GeneID:32987 KEGG:dme:Dmel_CG12532
UCSC:CG12532-RA CTD:32987 FlyBase:FBgn0010380 InParanoid:Q24253
OrthoDB:EOG4GHX41 GenomeRNAi:32987 NextBio:781377 Uniprot:Q24253
Length = 921
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 128/214 (59%), Positives = 162/214 (75%)
Query: 36 GVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEASLPMATTGA 95
G + M++T TNK+M PM NFAIQ+NKNSFGL PA P+Q +PL P+ S+E S+ + T G
Sbjct: 718 GEVFMDMTLTNKAMQPMTNFAIQLNKNSFGLVPASPMQA-APLPPNQSIEVSMALGTNGP 776
Query: 96 VQRMEPLTNLQVAVKNNLDVFYFACIVPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNA 155
+QRMEPL NLQVAVKNN+D+FYFAC+V NV F EDG+++++ FL TWKEIP NE
Sbjct: 777 IQRMEPLNNLQVAVKNNIDIFYFACLVHGNVLFAEDGQLDKRVFLNTWKEIPAANE---- 832
Query: 156 IFCCQVQFTLTNIALGADAIVSRMKQNNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELK 215
+Q+TL+ + D I S+M NN+FTIAKRNVEG+DMLYQSL+LTN IWVL ELK
Sbjct: 833 -----LQYTLSGVIGTTDGIASKMTTNNIFTIAKRNVEGQDMLYQSLKLTNNIWVLLELK 887
Query: 216 IQPGDPSVTLSLKSRSSDVAQDIFHAYDAILHAP 249
+QPG+P TLSLKSRS +VA IF AY+AI+ +P
Sbjct: 888 LQPGNPEATLSLKSRSVEVANIIFAAYEAIIRSP 921
Score = 469 (170.2 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 90/147 (61%), Positives = 112/147 (76%)
Query: 5 PKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSF 64
PK WLPAEKGKG+EI GTFSR+ N G + M++T TNK+M PM NFAIQ+NKNSF
Sbjct: 694 PKVTWLPAEKGKGLEIQGTFSRR-N------GEVFMDMTLTNKAMQPMTNFAIQLNKNSF 746
Query: 65 GLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACIVPI 124
GL PA P+Q +PL P+ S+E S+ + T G +QRMEPL NLQVAVKNN+D+FYFAC+V
Sbjct: 747 GLVPASPMQA-APLPPNQSIEVSMALGTNGPIQRMEPLNNLQVAVKNNIDIFYFACLVHG 805
Query: 125 NVYFMEDGEMERKTFLTTWKEIPTQNE 151
NV F EDG+++++ FL TWKEIP NE
Sbjct: 806 NVLFAEDGQLDKRVFLNTWKEIPAANE 832
>WB|WBGene00000160 [details] [associations]
symbol:apb-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0002119 GO:GO:0008565 GO:GO:0000003
HOGENOM:HOG000163270 KO:K11825 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 OMA:PGNPSCT
GeneTree:ENSGT00530000063138 EMBL:FO081557 UniGene:Cel.22457
GeneID:175376 KEGG:cel:CELE_Y71H2B.10 UCSC:Y71H2B.10a CTD:175376
NextBio:887890 RefSeq:NP_001022937.1 ProteinModelPortal:Q9N4F3
SMR:Q9N4F3 DIP:DIP-27411N IntAct:Q9N4F3 MINT:MINT-116366
STRING:Q9N4F3 PRIDE:Q9N4F3 EnsemblMetazoa:Y71H2B.10a.1
EnsemblMetazoa:Y71H2B.10a.2 WormBase:Y71H2B.10a InParanoid:Q9N4F3
ArrayExpress:Q9N4F3 Uniprot:Q9N4F3
Length = 955
Score = 516 (186.7 bits), Expect = 1.2e-48, P = 1.2e-48
Identities = 111/246 (45%), Positives = 158/246 (64%)
Query: 3 TPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNKN 62
T PK+ WL A K GM++ GTF R+ G G I ME+T TN++M ++ FA+Q NKN
Sbjct: 727 TYPKELWLDASKAMGMQVEGTFVRR------G-GKIFMEMTITNRAMQAISGFALQFNKN 779
Query: 63 SFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACIV 122
SFGL P + +P+LP+ S ++ TTGAVQ PLTNLQVA+KN+++ FYFA V
Sbjct: 780 SFGLIPVEQVNP-APILPNQSQNYTIACDTTGAVQVTTPLTNLQVAIKNDINAFYFATTV 838
Query: 123 PINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIA-LGADAIVSRMKQ 181
P+ YF EDG+ME++ FL WK IP QNE QFTL N + ADAI ++++Q
Sbjct: 839 PLLAYFREDGQMEKREFLEEWKSIPEQNEQ---------QFTLQNTHNMNADAICTKLQQ 889
Query: 182 NNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHA 241
NN+ T+A+R V+ + +LY S++ TN + VL+ELK+ S+TLSLKS++ +I
Sbjct: 890 NNIHTVARRQVDNQQLLYHSVKYTNNLNVLSELKVNSQTTSITLSLKSKNLMAIANINEV 949
Query: 242 YDAILH 247
+ A+L+
Sbjct: 950 FQALLN 955
>UNIPROTKB|F1NCR9 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
EMBL:AADN02050473 EMBL:AADN02050474 EMBL:AADN02050475
IPI:IPI00571321 Ensembl:ENSGALT00000038029 Uniprot:F1NCR9
Length = 881
Score = 466 (169.1 bits), Expect = 2.3e-43, P = 2.3e-43
Identities = 97/195 (49%), Positives = 132/195 (67%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTFSR+ +G I M+L TNK++ M++FAIQ N+
Sbjct: 694 YVAPKTVWLPAMKAKGLEISGTFSRQ-------VGSICMDLVLTNKALQVMSDFAIQFNR 746
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLDVFYFACI 121
NSFGL PA PLQV +PL P+ SVE SLP+ T G+V +M+PL NLQVAVKNN+DVFYF+ +
Sbjct: 747 NSFGLAPAAPLQVHAPLAPNQSVEISLPLNTVGSVMKMDPLNNLQVAVKNNIDVFYFSTL 806
Query: 122 VPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQ----FTLT--NIALGADAI 175
P+++ F+EDG+MER+ FL TWK+IP +NE I C + FT+ N+ G D +
Sbjct: 807 YPLHILFVEDGKMERQMFLATWKDIPNENEAQFQIKDCSLNAXNIFTIAKRNVE-GQDML 865
Query: 176 VSRMK-QNNVFTIAK 189
+K N ++ +A+
Sbjct: 866 YQSLKLTNGIWVLAE 880
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 28/32 (87%), Positives = 31/32 (96%)
Query: 183 NVFTIAKRNVEGKDMLYQSLRLTNGIWVLNEL 214
N+FTIAKRNVEG+DMLYQSL+LTNGIWVL EL
Sbjct: 850 NIFTIAKRNVEGQDMLYQSLKLTNGIWVLAEL 881
>TAIR|locus:2117924 [details] [associations]
symbol:AT4G23460 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0030276 "clathrin
binding" evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0005886 GO:GO:0009506 GO:GO:0005794 GO:GO:0006886
EMBL:CP002687 GenomeReviews:CT486007_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0006897
eggNOG:COG5096 HOGENOM:HOG000163270 GO:GO:0030131 GO:GO:0030665
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 KO:K12392
OMA:SDPNPLI EMBL:AL031326 EMBL:AL161559 EMBL:AY065000 EMBL:AF216387
IPI:IPI00521980 PIR:T05384 RefSeq:NP_194077.1 UniGene:At.2441
ProteinModelPortal:O81742 SMR:O81742 STRING:O81742 PaxDb:O81742
PRIDE:O81742 EnsemblPlants:AT4G23460.1 GeneID:828445
KEGG:ath:AT4G23460 TAIR:At4g23460 InParanoid:Q8VZF2
PhylomeDB:O81742 ProtClustDB:CLSN2685309 Genevestigator:O81742
Uniprot:O81742
Length = 893
Score = 308 (113.5 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 83/240 (34%), Positives = 120/240 (50%)
Query: 10 LPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPA 69
LPA KG+G++I +R+ G + + N S + + F IQ NKNSFGL
Sbjct: 670 LPASKGQGLQISAQLTRQD-------GQVFYSMLLENNSQSLLDGFMIQFNKNSFGLAAV 722
Query: 70 RPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQVAVKNNLD-VFYFACIVPINVYF 128
LQV PL P S +PM + + + LQVAVKNN V+YF + +N F
Sbjct: 723 GSLQV-PPLQPGASARTMMPMVLSQNMSTGSTSSVLQVAVKNNQQPVWYFEDKIVLNALF 781
Query: 129 MEDGEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQNNVFTIA 188
EDG MER TFL TWK +P NE Q +F I ++ + + +N+F IA
Sbjct: 782 SEDGRMERGTFLETWKSLPDSNE-------VQKEFPGITIT-SVESTLDLLAASNMFFIA 833
Query: 189 KRNVEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHAYDAILHA 248
KR +D+LY S ++ GI L EL G P + ++K+ + ++A F A + + A
Sbjct: 834 KRKNGNQDVLYLSAKVPRGIPFLIELTAIVGQPGLKCAVKTPTPEIAPLFFEAVEILFKA 893
>UNIPROTKB|F1S182 [details] [associations]
symbol:LOC100517121 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR013037 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
PIRSF:PIRSF002291 SMART:SM00809 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 KO:K11825 GO:GO:0030131 Gene3D:2.60.40.1150
PANTHER:PTHR11134 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:YDISATM EMBL:CU927946 RefSeq:XP_003131766.3
Ensembl:ENSSSCT00000019278 GeneID:100517121 KEGG:ssc:100517121
Uniprot:F1S182
Length = 819
Score = 275 (101.9 bits), Expect = 7.1e-23, P = 7.1e-23
Identities = 55/106 (51%), Positives = 72/106 (67%)
Query: 2 YTPPKQCWLPAEKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNK 61
Y PK WLPA K KG+EI GTF+ + G I ME+ FTNK++ M +FAIQ NK
Sbjct: 721 YVAPKAVWLPAVKAKGLEISGTFTHRQ-------GHIYMEMNFTNKALQHMTDFAIQFNK 773
Query: 62 NSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQRMEPLTNLQV 107
NSFG+ P+ PL + +PL+P+ S++ SLP+ T G V +MEPL NLQV
Sbjct: 774 NSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQV 819
>DICTYBASE|DDB_G0279141 [details] [associations]
symbol:ap1b1 "beta adaptin" species:44689
"Dictyostelium discoideum" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0030665 "clathrin-coated
vesicle membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 dictyBase:DDB_G0279141 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CM000152_GR GO:GO:0008565
GO:GO:0006897 EMBL:AAFI02000027 eggNOG:COG5096 GO:GO:0030131
GO:GO:0030665 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 KO:K12392 RefSeq:XP_641846.1 HSSP:P63010
ProteinModelPortal:Q54X82 SMR:Q54X82 STRING:Q54X82 PRIDE:Q54X82
EnsemblProtists:DDB0234067 GeneID:8621892 KEGG:ddi:DDB_G0279141
OMA:SDPNPLI ProtClustDB:CLSZ2735785 Uniprot:Q54X82
Length = 942
Score = 231 (86.4 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 56/236 (23%), Positives = 116/236 (49%)
Query: 13 EKGKGMEIWGTFSRKPNPATPGIGVIEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPL 72
++ + ++I G F+R G I +EL N S M+ F IQ +NSFG++PA +
Sbjct: 718 DRSQAIQISGAFTRFQ-------GRINLELNLLNTSQQGMSKFKIQFYQNSFGISPADQI 770
Query: 73 QVMSPLLPSLSVEASLPMATTGAVQR-MEPLTNLQVAVKNNLDVFYFACIVPINVYFMED 131
+ S + ++P++ G + + P+ ++ + V + + FYF P+ E
Sbjct: 771 LSCGAIEVGQSTDVTIPISCNGQISNPLNPVIDMAMMVLPSQERFYFKMNFPLLCLLTET 830
Query: 132 GEMERKTFLTTWKEIPTQNEDGNAIFCCQVQFTLTNIALGADAIVSRMKQNNVFTIAKRN 191
G ++R+++L+ WK IP NE ++Q L ++ + D+I+ R+ N+F I ++
Sbjct: 831 GRLDRESYLSMWKSIPESNERS-----VEIQVRLPHVDV--DSILRRLNSKNIFEIVRKK 883
Query: 192 VEGKDMLYQSLRLTNGIWVLNELKIQPGDPSVTLSLKSRSSDVAQDIFHAYDAILH 247
+++ + S + + +++L EL + S K+ S D+ H + +++
Sbjct: 884 APNQEISFLSCKTESSVYILIELAFNISTNTCRCSSKTTSPDIMALFEHNLNLLIN 939
>GENEDB_PFALCIPARUM|PFE1400c [details] [associations]
symbol:PFE1400c "beta adaptin protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016192 "vesicle-mediated
transport" evidence=ISS] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 HOGENOM:HOG000163270 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 EMBL:AL844504
RefSeq:XP_001351835.2 ProteinModelPortal:Q8I3I6 IntAct:Q8I3I6
MINT:MINT-1744951 PRIDE:Q8I3I6 EnsemblProtists:PFE1400c:mRNA
GeneID:813094 KEGG:pfa:PFE1400c EuPathDB:PlasmoDB:PF3D7_0528100
ProtClustDB:CLSZ2433409 Uniprot:Q8I3I6
Length = 929
Score = 225 (84.3 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 59/199 (29%), Positives = 101/199 (50%)
Query: 38 IEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQ 97
I+++++ TN++ + +Q+NKNSFGL+ L V + E + +
Sbjct: 721 IQLKISVTNQTQNEIVVSGVQINKNSFGLSSPNNLDVQNIGFGETK-EMLIYLIPNTLNS 779
Query: 98 RMEPLTNL--QVAVKNNLDVFYFACIVPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNA 155
P T L QVA++ NLD+FYF I V F+E+ ME+ F W+ I E
Sbjct: 780 NTPPATPLFLQVAIRTNLDIFYFNVPYDIFVVFVENFHMEKDIFKKKWQIIEEAKES--- 836
Query: 156 IFCCQVQFTLTNIALGADAIVSRMKQNNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELK 215
+ ++ + + +D ++ RMK N+ IA+RNV ++ Y + TN + +L+E+
Sbjct: 837 -----ILMAVSPMVITSDMLIKRMKIFNISLIARRNVNNMELYYFACITTNNLVILSEVT 891
Query: 216 IQPGDPSVTLSLKSRSSDV 234
IQP +V L +++ SS V
Sbjct: 892 IQPEKKNVKLCIRTDSSSV 910
>UNIPROTKB|Q8I3I6 [details] [associations]
symbol:PFE1400c "Beta adaptin protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016192
"vesicle-mediated transport" evidence=ISS] InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM01020
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 HOGENOM:HOG000163270
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:AL844504 RefSeq:XP_001351835.2
ProteinModelPortal:Q8I3I6 IntAct:Q8I3I6 MINT:MINT-1744951
PRIDE:Q8I3I6 EnsemblProtists:PFE1400c:mRNA GeneID:813094
KEGG:pfa:PFE1400c EuPathDB:PlasmoDB:PF3D7_0528100
ProtClustDB:CLSZ2433409 Uniprot:Q8I3I6
Length = 929
Score = 225 (84.3 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 59/199 (29%), Positives = 101/199 (50%)
Query: 38 IEMELTFTNKSMAPMANFAIQVNKNSFGLTPARPLQVMSPLLPSLSVEASLPMATTGAVQ 97
I+++++ TN++ + +Q+NKNSFGL+ L V + E + +
Sbjct: 721 IQLKISVTNQTQNEIVVSGVQINKNSFGLSSPNNLDVQNIGFGETK-EMLIYLIPNTLNS 779
Query: 98 RMEPLTNL--QVAVKNNLDVFYFACIVPINVYFMEDGEMERKTFLTTWKEIPTQNEDGNA 155
P T L QVA++ NLD+FYF I V F+E+ ME+ F W+ I E
Sbjct: 780 NTPPATPLFLQVAIRTNLDIFYFNVPYDIFVVFVENFHMEKDIFKKKWQIIEEAKES--- 836
Query: 156 IFCCQVQFTLTNIALGADAIVSRMKQNNVFTIAKRNVEGKDMLYQSLRLTNGIWVLNELK 215
+ ++ + + +D ++ RMK N+ IA+RNV ++ Y + TN + +L+E+
Sbjct: 837 -----ILMAVSPMVITSDMLIKRMKIFNISLIARRNVNNMELYYFACITTNNLVILSEVT 891
Query: 216 IQPGDPSVTLSLKSRSSDV 234
IQP +V L +++ SS V
Sbjct: 892 IQPEKKNVKLCIRTDSSSV 910
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 250 250 0.00080 114 3 11 22 0.44 33
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 610 (65 KB)
Total size of DFA: 187 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:05
No. of threads or processors used: 24
Search cpu time: 21.47u 0.09s 21.56t Elapsed: 00:00:42
Total cpu time: 21.48u 0.09s 21.57t Elapsed: 00:00:50
Start: Thu Aug 15 10:49:37 2013 End: Thu Aug 15 10:50:27 2013