Query psy8029
Match_columns 693
No_of_seqs 568 out of 5302
Neff 9.8
Searched_HMMs 46136
Date Fri Aug 16 16:37:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8029.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8029hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 3.6E-50 7.8E-55 477.8 37.7 544 20-669 55-605 (968)
2 KOG4194|consensus 100.0 7.6E-50 1.6E-54 402.6 10.8 439 78-573 55-502 (873)
3 PLN00113 leucine-rich repeat r 100.0 3E-47 6.6E-52 452.7 34.6 517 75-680 69-593 (968)
4 KOG4194|consensus 100.0 5.8E-42 1.3E-46 345.8 9.1 373 39-427 69-447 (873)
5 KOG4237|consensus 100.0 3.2E-42 7E-47 333.1 -2.6 413 199-668 68-498 (498)
6 KOG0472|consensus 100.0 1.7E-39 3.7E-44 314.5 -15.8 475 103-671 47-541 (565)
7 KOG0472|consensus 100.0 3E-38 6.5E-43 305.9 -15.9 478 74-655 44-544 (565)
8 KOG0618|consensus 100.0 4.3E-34 9.3E-39 304.2 -7.5 398 50-482 23-422 (1081)
9 KOG0618|consensus 100.0 3.5E-32 7.6E-37 289.7 -3.4 415 53-518 3-420 (1081)
10 KOG0444|consensus 100.0 8.4E-32 1.8E-36 274.1 -4.8 360 74-454 6-373 (1255)
11 KOG0444|consensus 100.0 1.6E-31 3.4E-36 272.1 -4.1 383 47-450 6-393 (1255)
12 KOG4237|consensus 100.0 3.8E-31 8.3E-36 256.5 -4.1 311 64-381 57-400 (498)
13 PLN03210 Resistant to P. syrin 99.9 2.6E-20 5.7E-25 222.2 27.2 337 91-453 548-903 (1153)
14 PRK15387 E3 ubiquitin-protein 99.9 6.1E-21 1.3E-25 211.2 18.5 261 152-461 203-463 (788)
15 PRK15387 E3 ubiquitin-protein 99.9 6.2E-21 1.4E-25 211.1 18.3 257 102-404 202-458 (788)
16 PLN03210 Resistant to P. syrin 99.9 1.2E-19 2.6E-24 216.6 29.4 334 117-478 549-904 (1153)
17 PRK15370 E3 ubiquitin-protein 99.8 9.5E-19 2.1E-23 195.3 16.9 245 102-380 179-428 (754)
18 PRK15370 E3 ubiquitin-protein 99.8 2.8E-18 6.1E-23 191.5 15.6 248 174-456 178-428 (754)
19 cd00116 LRR_RI Leucine-rich re 99.7 9.5E-18 2.1E-22 174.2 3.7 216 292-517 77-319 (319)
20 cd00116 LRR_RI Leucine-rich re 99.6 1.2E-16 2.7E-21 165.8 2.5 58 154-211 2-64 (319)
21 KOG0617|consensus 99.5 1.1E-16 2.4E-21 138.7 -4.7 181 319-518 31-212 (264)
22 KOG0617|consensus 99.5 2.2E-16 4.8E-21 136.9 -5.1 162 97-266 29-191 (264)
23 PF14580 LRR_9: Leucine-rich r 99.3 1.3E-12 2.9E-17 119.3 4.5 128 123-254 16-148 (175)
24 PF14580 LRR_9: Leucine-rich r 99.3 2.2E-12 4.7E-17 117.9 4.9 128 318-450 16-147 (175)
25 KOG1909|consensus 99.2 3.1E-12 6.7E-17 124.2 -1.3 135 345-479 157-310 (382)
26 KOG1259|consensus 99.1 9E-12 2E-16 118.0 1.0 133 320-460 283-416 (490)
27 KOG1909|consensus 99.1 7.2E-12 1.6E-16 121.7 -0.9 137 320-456 156-311 (382)
28 KOG3207|consensus 99.1 1.3E-11 2.7E-16 123.2 0.0 207 272-482 121-341 (505)
29 KOG3207|consensus 99.0 1.6E-11 3.5E-16 122.5 -1.8 65 147-211 118-185 (505)
30 KOG1259|consensus 99.0 4.5E-11 9.8E-16 113.3 1.3 132 101-239 284-416 (490)
31 COG4886 Leucine-rich repeat (L 99.0 3E-10 6.4E-15 121.5 6.8 175 297-483 117-293 (394)
32 KOG0531|consensus 99.0 4.2E-11 9.2E-16 128.1 -1.2 242 126-405 72-319 (414)
33 COG4886 Leucine-rich repeat (L 99.0 6.4E-10 1.4E-14 118.9 6.9 179 272-462 116-296 (394)
34 KOG0531|consensus 98.9 1.5E-10 3.2E-15 124.0 -0.6 218 150-404 49-268 (414)
35 PF13855 LRR_8: Leucine rich r 98.9 9.6E-10 2.1E-14 82.6 4.0 59 102-161 2-60 (61)
36 KOG0532|consensus 98.9 4.4E-11 9.4E-16 123.1 -4.6 175 102-288 76-250 (722)
37 PF13855 LRR_8: Leucine rich r 98.9 7.9E-10 1.7E-14 83.1 3.2 61 126-186 1-61 (61)
38 KOG0532|consensus 98.9 1.2E-10 2.5E-15 119.9 -3.8 204 262-478 64-271 (722)
39 KOG4658|consensus 98.9 2.3E-09 5E-14 122.5 5.8 272 76-360 524-809 (889)
40 KOG4658|consensus 98.8 1E-08 2.2E-13 117.3 7.4 128 101-232 523-652 (889)
41 KOG1859|consensus 98.7 2.4E-10 5.2E-15 120.6 -6.6 131 366-519 163-293 (1096)
42 PF13306 LRR_5: Leucine rich r 98.7 2.8E-08 6E-13 87.9 7.0 126 92-224 3-128 (129)
43 PF13306 LRR_5: Leucine rich r 98.7 5.4E-08 1.2E-12 86.0 7.5 126 117-248 3-128 (129)
44 PLN03150 hypothetical protein; 98.7 5.1E-08 1.1E-12 109.3 9.0 111 393-520 420-530 (623)
45 KOG1859|consensus 98.6 1.1E-09 2.4E-14 115.7 -7.0 181 42-235 103-292 (1096)
46 PLN03150 hypothetical protein; 98.6 1.3E-07 2.8E-12 106.1 8.7 109 368-480 419-528 (623)
47 KOG2120|consensus 98.3 3.5E-08 7.6E-13 94.1 -4.4 64 97-161 206-271 (419)
48 KOG1644|consensus 98.2 2.1E-06 4.5E-11 77.9 5.5 103 127-231 43-149 (233)
49 KOG2120|consensus 98.2 4.4E-08 9.6E-13 93.4 -5.4 179 247-429 186-373 (419)
50 KOG4341|consensus 98.2 8.2E-08 1.8E-12 95.9 -4.0 133 294-429 292-436 (483)
51 KOG4341|consensus 98.2 1.4E-07 3E-12 94.3 -2.9 180 48-233 138-331 (483)
52 KOG1644|consensus 98.2 2.7E-06 5.8E-11 77.1 5.1 86 345-433 42-127 (233)
53 COG5238 RNA1 Ran GTPase-activa 98.1 6.2E-07 1.3E-11 84.6 -1.0 207 47-257 29-283 (388)
54 TIGR00864 PCC polycystin catio 98.0 3.8E-06 8.2E-11 102.8 4.9 80 473-572 1-83 (2740)
55 KOG2982|consensus 98.0 9.8E-07 2.1E-11 84.4 -0.5 83 151-233 46-132 (418)
56 COG5238 RNA1 Ran GTPase-activa 98.0 1.1E-06 2.3E-11 83.1 -0.7 43 269-312 89-135 (388)
57 KOG4579|consensus 97.9 5.5E-07 1.2E-11 76.2 -3.0 109 323-437 29-141 (177)
58 KOG2982|consensus 97.9 2.4E-06 5.3E-11 81.8 0.4 64 391-457 199-263 (418)
59 PF12799 LRR_4: Leucine Rich r 97.9 1E-05 2.2E-10 55.5 2.8 38 420-458 2-39 (44)
60 PF12799 LRR_4: Leucine Rich r 97.8 2.4E-05 5.1E-10 53.7 3.7 38 102-141 2-39 (44)
61 KOG4579|consensus 97.8 1.8E-06 4E-11 73.1 -2.2 90 149-240 52-141 (177)
62 PRK15386 type III secretion pr 97.7 0.00012 2.6E-09 75.6 9.1 13 245-257 51-63 (426)
63 KOG3665|consensus 97.7 2.3E-05 4.9E-10 87.9 2.8 133 101-235 122-263 (699)
64 PRK15386 type III secretion pr 97.6 0.00057 1.2E-08 70.8 11.7 91 270-376 50-141 (426)
65 KOG3665|consensus 97.4 6.2E-05 1.4E-09 84.4 1.3 133 318-450 145-282 (699)
66 KOG2739|consensus 97.3 7.2E-05 1.6E-09 71.1 1.2 83 126-210 43-128 (260)
67 KOG2123|consensus 97.3 5.1E-06 1.1E-10 78.9 -6.9 82 321-404 19-101 (388)
68 smart00082 LRRCT Leucine rich 97.3 0.00016 3.4E-09 51.8 2.1 48 515-569 1-50 (51)
69 KOG2739|consensus 97.3 0.00016 3.5E-09 68.8 2.5 107 342-451 40-151 (260)
70 KOG2123|consensus 97.2 1.7E-05 3.6E-10 75.5 -4.6 80 101-185 19-99 (388)
71 KOG1947|consensus 96.6 0.00026 5.7E-09 77.9 -1.9 237 99-357 186-439 (482)
72 KOG1947|consensus 96.5 0.00063 1.4E-08 74.9 -0.1 238 148-404 186-440 (482)
73 PF13504 LRR_7: Leucine rich r 95.1 0.012 2.6E-07 31.0 1.2 16 639-654 2-17 (17)
74 PF00560 LRR_1: Leucine Rich R 94.8 0.015 3.3E-07 33.0 1.2 17 128-144 2-18 (22)
75 PF00560 LRR_1: Leucine Rich R 93.9 0.034 7.3E-07 31.6 1.4 21 102-124 1-21 (22)
76 KOG4308|consensus 93.1 0.00085 1.8E-08 72.2 -11.3 85 173-257 203-301 (478)
77 PF01462 LRRNT: Leucine rich r 93.0 0.064 1.4E-06 32.5 1.6 28 573-606 1-28 (28)
78 smart00369 LRR_TYP Leucine-ric 92.7 0.076 1.6E-06 31.5 1.6 20 127-146 3-22 (26)
79 smart00370 LRR Leucine-rich re 92.7 0.076 1.6E-06 31.5 1.6 20 127-146 3-22 (26)
80 PF13504 LRR_7: Leucine rich r 92.1 0.096 2.1E-06 27.5 1.4 11 128-138 3-13 (17)
81 KOG3864|consensus 92.1 0.03 6.5E-07 51.5 -1.0 83 368-452 102-185 (221)
82 KOG3864|consensus 91.5 0.026 5.5E-07 52.0 -2.2 90 42-135 93-185 (221)
83 smart00370 LRR Leucine-rich re 91.3 0.22 4.7E-06 29.5 2.5 21 150-170 2-22 (26)
84 smart00369 LRR_TYP Leucine-ric 91.3 0.22 4.7E-06 29.5 2.5 21 150-170 2-22 (26)
85 KOG4308|consensus 91.2 0.0049 1.1E-07 66.4 -8.3 185 49-236 88-304 (478)
86 smart00013 LRRNT Leucine rich 90.8 0.26 5.5E-06 31.2 2.6 29 574-608 2-30 (33)
87 KOG0473|consensus 85.5 0.017 3.8E-07 54.0 -7.5 84 123-209 39-122 (326)
88 smart00364 LRR_BAC Leucine-ric 84.5 0.59 1.3E-05 27.5 1.2 17 639-655 3-19 (26)
89 PF13516 LRR_6: Leucine Rich r 83.9 0.39 8.5E-06 27.7 0.4 16 419-434 2-17 (24)
90 smart00365 LRR_SD22 Leucine-ri 83.9 0.81 1.8E-05 27.1 1.7 16 638-653 2-17 (26)
91 smart00364 LRR_BAC Leucine-ric 83.1 0.61 1.3E-05 27.5 0.9 19 657-675 1-19 (26)
92 KOG0473|consensus 83.0 0.039 8.5E-07 51.8 -6.3 81 101-185 42-122 (326)
93 smart00365 LRR_SD22 Leucine-ri 79.1 1.6 3.4E-05 25.9 1.7 19 657-675 1-19 (26)
94 KOG3763|consensus 63.7 4.4 9.5E-05 43.5 2.0 11 507-517 272-282 (585)
95 smart00367 LRR_CC Leucine-rich 62.5 3 6.4E-05 24.6 0.3 17 101-117 2-18 (26)
96 smart00368 LRR_RI Leucine rich 60.1 6.7 0.00014 23.6 1.6 13 639-651 3-15 (28)
97 KOG3763|consensus 54.3 6.4 0.00014 42.3 1.3 62 319-380 216-283 (585)
98 KOG4242|consensus 50.5 79 0.0017 33.7 8.3 14 126-139 165-178 (553)
99 PF01463 LRRCT: Leucine rich r 50.3 7 0.00015 22.8 0.5 20 549-569 2-24 (25)
100 TIGR00864 PCC polycystin catio 39.9 14 0.0003 47.9 1.4 32 620-651 1-32 (2740)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.6e-50 Score=477.82 Aligned_cols=544 Identities=20% Similarity=0.187 Sum_probs=392.5
Q ss_pred eccCCeEEEEecCCCCCCCccCCCCCCCCCccEEEEEcCCCCCccHHHHhhhcCcccccEEEeecCCCCcc-CCCCccCC
Q psy8029 20 IDCSHFVGVENSSSSNGSIYDRLPEQNLGPFNAVTFTFCPLPDENFISLFSKLNITTINTLAFSNSPSNVG-VLSPPYFD 98 (693)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~L~l~~c~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~-~l~~~~~~ 98 (693)
.+||.|.++.|.+ .++++.|+++++.+....... ...++.|+.|++++| .++ .++...+.
T Consensus 55 ~~~c~w~gv~c~~--------------~~~v~~L~L~~~~i~~~~~~~---~~~l~~L~~L~Ls~n--~~~~~ip~~~~~ 115 (968)
T PLN00113 55 ADVCLWQGITCNN--------------SSRVVSIDLSGKNISGKISSA---IFRLPYIQTINLSNN--QLSGPIPDDIFT 115 (968)
T ss_pred CCCCcCcceecCC--------------CCcEEEEEecCCCccccCChH---HhCCCCCCEEECCCC--ccCCcCChHHhc
Confidence 5788888888843 136788888888765432121 235778888888887 776 56656666
Q ss_pred CcccccEEEccCCcCcccccccccCCCCCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCE
Q psy8029 99 GLHFVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRI 178 (693)
Q Consensus 99 ~l~~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 178 (693)
++.+|++|++++| .+++..+ ...+++|++|++++|.+++..+..++++++|++|++++|.+.+..|..+.++++|++
T Consensus 116 ~l~~L~~L~Ls~n-~l~~~~p--~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 192 (968)
T PLN00113 116 TSSSLRYLNLSNN-NFTGSIP--RGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEF 192 (968)
T ss_pred cCCCCCEEECcCC-ccccccC--ccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCe
Confidence 8888888888888 7765333 245778888888888887644455788888888888888887777777888888888
Q ss_pred EEccCCCCCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCCCccccCChhhhhcccCceEEEEecCCC
Q psy8029 179 LNLDHNQLINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEMKYLQVIKISYHKD 258 (693)
Q Consensus 179 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~ 258 (693)
|++++|++++..+..++.+++|++|++++|.+++..+..+.++++|++|++++|.+....+..|.++++|++|++++|.+
T Consensus 193 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 272 (968)
T PLN00113 193 LTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKL 272 (968)
T ss_pred eeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCee
Confidence 88888888877777788888888888888888876666678888888888888888765555678888888888888874
Q ss_pred cccccCccccCCCCCccEEEcCCCCCcccCcccccCCCCccEEEecCCCCCCcCChhhhcCCCCCcEEEccCCCCCCCCh
Q psy8029 259 SLKELPSGLFANLPLLNTVILGESSIAELPSDLFWNSTNITNIVLTGHKKLTSLPSTLFRDCKKLVKLELQRNKLKYLPE 338 (693)
Q Consensus 259 ~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n~l~~~~~ 338 (693)
.. .+|. .+..+++|+.|++++|.+.+..+..+..+++|+.|++++| .+....+..+..+++|+.|++++|.+....+
T Consensus 273 ~~-~~p~-~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n-~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 349 (968)
T PLN00113 273 SG-PIPP-SIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSN-NFTGKIPVALTSLPRLQVLQLWSNKFSGEIP 349 (968)
T ss_pred ec-cCch-hHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCC-ccCCcCChhHhcCCCCCEEECcCCCCcCcCC
Confidence 32 3443 3667788888888888877666666777888888888888 5543333445778888888888888774434
Q ss_pred hhhccCccCceEeccCCcCcc-ccCc-cCCCCCCeEeCCCCccccccccccCCCCCCcEEECCCCcCcccccccCCCCcc
Q psy8029 339 NLFESLKELYTLNLKNNQLEN-ITSL-VGLSGLNSLDLSWNQLEQINLIAFDGLSSLNTVDLSHNLLTFDEYQYGYSPLK 416 (693)
Q Consensus 339 ~~~~~~~~L~~L~Ls~n~l~~-l~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~ 416 (693)
..+..+++|+.|++++|++++ +|.. ..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+++. .+..+.
T Consensus 350 ~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~----~p~~~~ 425 (968)
T PLN00113 350 KNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGE----LPSEFT 425 (968)
T ss_pred hHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeE----CChhHh
Confidence 456777888888888888775 4443 5667788888888888877777777888888888888887755 355677
Q ss_pred CCCCCcEEECCCCCCCcCChhHHhcCCCCcEEECCCCCCccCCCcccccCCCccEEECCCCCCceeeccchhhhcccCCC
Q psy8029 417 QCVNLETINLSYNRISSLFDDWISSMTSLKELDLRHNNFSFIPDQLDSIVSNKLTLDLSFNQIAIVDLRTLEIKAAAQDP 496 (693)
Q Consensus 417 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~ 496 (693)
.+++|+.|++++|.+++..+..+..+++|+.|++++|++.+..+..+ ..++|+.|++++|++++..+..+..+
T Consensus 426 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l------ 498 (968)
T PLN00113 426 KLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSL------ 498 (968)
T ss_pred cCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhh------
Confidence 78888888888888888777777778888888888888876655533 34677888888888877666555444
Q ss_pred CCccccccccCcEEEcCCCcccccCCcHHHHHHHhcccccceeeeeeeccCceeecCCCCccccccCCCCCcccCCCCCC
Q psy8029 497 NEDSTMVARSANIVILNDNPIACNCSNYDLIRFVSKKMTKTVYQMLELVTDNLECFGNAGVGINSVRPENLTCDTKPCPA 576 (693)
Q Consensus 497 ~~~~~~~~~~l~~l~l~~Np~~c~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~l~~~~l~c~~~~cp~ 576 (693)
.+++.+++++|.+.... +.
T Consensus 499 --------~~L~~L~Ls~N~l~~~~-------------p~---------------------------------------- 517 (968)
T PLN00113 499 --------SELMQLKLSENKLSGEI-------------PD---------------------------------------- 517 (968)
T ss_pred --------hccCEEECcCCcceeeC-------------Ch----------------------------------------
Confidence 34667777777643100 00
Q ss_pred CcEeeecCCCceEEEEcCCCCcc-cCCCCCCCCccccCceEEEEEecCCccccCCCCCCcccccCcEEEccCCccc-ccc
Q psy8029 577 RCYCNFSPYYSIMSVNCSSASLT-HMPDYLPVTYEDKKATSIQLILHNNSINHFLESPPESYKLITDLDLSYNNIS-HVD 654 (693)
Q Consensus 577 ~~~~~~~~~~~l~~l~ls~n~l~-~ip~~~~~l~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~ 654 (693)
.+..+.+++++++++|.++ .+|..+..+ ..++.|+|++|++++..|..+.++++|+.|++++|+++ .+|
T Consensus 518 ----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 518 ----ELSSCKKLVSLDLSHNQLSGQIPASFSEM-----PVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred ----HHcCccCCCEEECCCCcccccCChhHhCc-----ccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 0111334677788888887 667666665 66777888888888777777777888888888888887 677
Q ss_pred C--cCCCccEEEeeCCc
Q psy8029 655 T--MYPYLNHLELIDSE 669 (693)
Q Consensus 655 ~--~~~~L~~L~l~~N~ 669 (693)
. .+..+....+.+|+
T Consensus 589 ~~~~~~~~~~~~~~~n~ 605 (968)
T PLN00113 589 STGAFLAINASAVAGNI 605 (968)
T ss_pred CcchhcccChhhhcCCc
Confidence 6 33455555666776
No 2
>KOG4194|consensus
Probab=100.00 E-value=7.6e-50 Score=402.60 Aligned_cols=439 Identities=23% Similarity=0.371 Sum_probs=291.6
Q ss_pred cEEEeecCCCCccCCCCccCCCc--ccccEEEccCCcCcccccccccCCCCCCcEEEeeCCcccccCcccCCC-CCCCcE
Q psy8029 78 NTLAFSNSPSNVGVLSPPYFDGL--HFVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNSITELYSGVFQY-VPKLQV 154 (693)
Q Consensus 78 ~~L~l~~~~~~i~~l~~~~~~~l--~~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~ 154 (693)
+.|+.++. .+..+....+.++ +.-+.|++++| .++.+....|.++++|+++++.+|.++.||. |+. ..+|+.
T Consensus 55 ~lldcs~~--~lea~~~~~l~g~lp~~t~~LdlsnN-kl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~--f~~~sghl~~ 129 (873)
T KOG4194|consen 55 RLLDCSDR--ELEAIDKSRLKGFLPSQTQTLDLSNN-KLSHIDFEFFYNLPNLQEVNLNKNELTRIPR--FGHESGHLEK 129 (873)
T ss_pred eeeecCcc--ccccccccccCCcCccceeeeecccc-ccccCcHHHHhcCCcceeeeeccchhhhccc--ccccccceeE
Confidence 34555555 5555544444432 24456888888 8888887778888888888888888877776 343 345888
Q ss_pred EEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCCCcc
Q psy8029 155 LDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFYANSNRF 234 (693)
Q Consensus 155 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l 234 (693)
|+|.+|.|..+..+.++.++.|+.|||+.|.|+.++...|..-.++++|+|++|.|+.+..+.|.++.+|..|.|+.|++
T Consensus 130 L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNri 209 (873)
T KOG4194|consen 130 LDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRI 209 (873)
T ss_pred EeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcc
Confidence 88888888888777777888888888888888887777777777788888888888888777787777888888888888
Q ss_pred ccCChhhhhcccCceEEEEecCCCcccccCccccCCCCCccEEEcCCCCCcccCcccccCCCCccEEEecCCCCCCcCCh
Q psy8029 235 QMFPKDLFAEMKYLQVIKISYHKDSLKELPSGLFANLPLLNTVILGESSIAELPSDLFWNSTNITNIVLTGHKKLTSLPS 314 (693)
Q Consensus 235 ~~~~~~~~~~~~~L~~L~l~~n~~~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~l~~l~~ 314 (693)
+.+|...|.++++|+.|+|..|+ +..+....|.++++|+.|.+..|++..+...+|.++.++++|++..| .+..+..
T Consensus 210 ttLp~r~Fk~L~~L~~LdLnrN~--irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N-~l~~vn~ 286 (873)
T KOG4194|consen 210 TTLPQRSFKRLPKLESLDLNRNR--IRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETN-RLQAVNE 286 (873)
T ss_pred cccCHHHhhhcchhhhhhccccc--eeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccc-hhhhhhc
Confidence 88777777777777777777777 43343344666666666666666666665555555555555555555 5555554
Q ss_pred hhhcCCCCCcEEEccCCCCCCCChhhhccCccCceEeccCCcCccccCccCCCCCCeEeCCCCccccccccccCCCCCCc
Q psy8029 315 TLFRDCKKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLENITSLVGLSGLNSLDLSWNQLEQINLIAFDGLSSLN 394 (693)
Q Consensus 315 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~l~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 394 (693)
+++-+++.|+.|+++.|.|..|....++-+++|++|+|++|+|+. ..+..|..+..|+
T Consensus 287 g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~----------------------l~~~sf~~L~~Le 344 (873)
T KOG4194|consen 287 GWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITR----------------------LDEGSFRVLSQLE 344 (873)
T ss_pred ccccccchhhhhccchhhhheeecchhhhcccceeEecccccccc----------------------CChhHHHHHHHhh
Confidence 444455555555555555555544444445555555555555554 4444454455555
Q ss_pred EEECCCCcCcccccccCCCCccCCCCCcEEECCCCCCCcCC---hhHHhcCCCCcEEECCCCCCccCCCcccccCCCccE
Q psy8029 395 TVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLF---DDWISSMTSLKELDLRHNNFSFIPDQLDSIVSNKLT 471 (693)
Q Consensus 395 ~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~---~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 471 (693)
+|+|++|++... ...+|.++.+|+.|||++|.++... ...|.++++|+.|++.||+|..++..+|.+++.|+.
T Consensus 345 ~LnLs~Nsi~~l----~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~ 420 (873)
T KOG4194|consen 345 ELNLSHNSIDHL----AEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEH 420 (873)
T ss_pred hhcccccchHHH----HhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccce
Confidence 555555555443 2344455555555555555544322 223556666666666666666666666666666677
Q ss_pred EECCCCCCceeeccchhhhcccCCCCCccccccccCcEEEcCCCcccccCCcHHHHHHHhcccccceeeeeeeccCceee
Q psy8029 472 LDLSFNQIAIVDLRTLEIKAAAQDPNEDSTMVARSANIVILNDNPIACNCSNYDLIRFVSKKMTKTVYQMLELVTDNLEC 551 (693)
Q Consensus 472 L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~l~~Np~~c~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 551 (693)
|||.+|.|..+.+.+|+.+ .|+.|.+..-.|-|||++.|+.+|+.+..... .....|
T Consensus 421 LdL~~NaiaSIq~nAFe~m---------------~Lk~Lv~nSssflCDCql~Wl~qWl~~~~lq~--------sv~a~C 477 (873)
T KOG4194|consen 421 LDLGDNAIASIQPNAFEPM---------------ELKELVMNSSSFLCDCQLKWLAQWLYRRKLQS--------SVIAKC 477 (873)
T ss_pred ecCCCCcceeecccccccc---------------hhhhhhhcccceEEeccHHHHHHHHHhccccc--------ceeeec
Confidence 7777777766666666554 25677777788999999999999998864322 235689
Q ss_pred cCC---CCccccccCCCCCcccCCC
Q psy8029 552 FGN---AGVGINSVRPENLTCDTKP 573 (693)
Q Consensus 552 ~~~---~~~~~~~l~~~~l~c~~~~ 573 (693)
..| .+..+.++++.++.|.-.|
T Consensus 478 ayPe~Lad~~i~svd~~~lvC~Dsp 502 (873)
T KOG4194|consen 478 AYPEPLADQSIVSVDTANLVCDDSP 502 (873)
T ss_pred cCCcccccceeEeechhhceecCCC
Confidence 988 8889999999999998443
No 3
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3e-47 Score=452.74 Aligned_cols=517 Identities=20% Similarity=0.214 Sum_probs=442.8
Q ss_pred ccccEEEeecCCCCccCCCCccCCCcccccEEEccCCcCcc-cccccccCCCCCCcEEEeeCCcccccCcccCCCCCCCc
Q psy8029 75 TTINTLAFSNSPSNVGVLSPPYFDGLHFVKHILLSHNKEIT-GLHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQ 153 (693)
Q Consensus 75 ~~L~~L~l~~~~~~i~~l~~~~~~~l~~L~~L~Ls~n~~i~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 153 (693)
..++.|+++++ .++...+..|..+++|+.|+|++| .+. .++.+.+..+++|++|++++|.+++..+. +.+++|+
T Consensus 69 ~~v~~L~L~~~--~i~~~~~~~~~~l~~L~~L~Ls~n-~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~ 143 (968)
T PLN00113 69 SRVVSIDLSGK--NISGKISSAIFRLPYIQTINLSNN-QLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLE 143 (968)
T ss_pred CcEEEEEecCC--CccccCChHHhCCCCCCEEECCCC-ccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCC
Confidence 46899999998 888766788999999999999999 887 58888888999999999999999864332 4689999
Q ss_pred EEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCCCc
Q psy8029 154 VLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFYANSNR 233 (693)
Q Consensus 154 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~ 233 (693)
+|++++|.+.+..+..++++++|++|++++|.+.+..+..++++++|++|++++|.+++..+..+..+++|+.|++++|.
T Consensus 144 ~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 223 (968)
T PLN00113 144 TLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNN 223 (968)
T ss_pred EEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCc
Confidence 99999999998878889999999999999999998888889999999999999999998777788999999999999999
Q ss_pred cccCChhhhhcccCceEEEEecCCCcccccCccccCCCCCccEEEcCCCCCcccCcccccCCCCccEEEecCCCCCCcCC
Q psy8029 234 FQMFPKDLFAEMKYLQVIKISYHKDSLKELPSGLFANLPLLNTVILGESSIAELPSDLFWNSTNITNIVLTGHKKLTSLP 313 (693)
Q Consensus 234 l~~~~~~~~~~~~~L~~L~l~~n~~~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~l~~l~ 313 (693)
+....+..+.++++|++|++++|.+.. .+|. .|..+++|+.|++++|.+.+..+..+..+++|+.|++++| .+....
T Consensus 224 l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~-~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n-~l~~~~ 300 (968)
T PLN00113 224 LSGEIPYEIGGLTSLNHLDLVYNNLTG-PIPS-SLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDN-SLSGEI 300 (968)
T ss_pred cCCcCChhHhcCCCCCEEECcCceecc-ccCh-hHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCC-eeccCC
Confidence 986666668999999999999998432 4444 4889999999999999998765566788999999999999 665444
Q ss_pred hhhhcCCCCCcEEEccCCCCCCCChhhhccCccCceEeccCCcCcc-ccCc-cCCCCCCeEeCCCCccccccccccCCCC
Q psy8029 314 STLFRDCKKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLEN-ITSL-VGLSGLNSLDLSWNQLEQINLIAFDGLS 391 (693)
Q Consensus 314 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~-l~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 391 (693)
+..|..+++|++|++++|.++...+..+..+++|+.|++++|.+++ +|.. ..+++|+.|++++|.+.+..+..+..++
T Consensus 301 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~ 380 (968)
T PLN00113 301 PELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSG 380 (968)
T ss_pred ChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcC
Confidence 4456899999999999999986666668899999999999999986 5554 7889999999999999998888999999
Q ss_pred CCcEEECCCCcCcccccccCCCCccCCCCCcEEECCCCCCCcCChhHHhcCCCCcEEECCCCCCccCCCcccccCCCccE
Q psy8029 392 SLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLFDDWISSMTSLKELDLRHNNFSFIPDQLDSIVSNKLT 471 (693)
Q Consensus 392 ~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 471 (693)
+|+.|++++|.+.+. .+..+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.
T Consensus 381 ~L~~L~l~~n~l~~~----~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 456 (968)
T PLN00113 381 NLFKLILFSNSLEGE----IPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQM 456 (968)
T ss_pred CCCEEECcCCEeccc----CCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcE
Confidence 999999999999866 4667888999999999999999988989999999999999999999988877788999999
Q ss_pred EECCCCCCceeeccchhhhcccCCCCCccccccccCcEEEcCCCcccccCCcHHHHHHHhcccccceeeeeeeccCceee
Q psy8029 472 LDLSFNQIAIVDLRTLEIKAAAQDPNEDSTMVARSANIVILNDNPIACNCSNYDLIRFVSKKMTKTVYQMLELVTDNLEC 551 (693)
Q Consensus 472 L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~l~~Np~~c~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 551 (693)
|++++|++.+..+..+.. .+++.+++++|.+.....
T Consensus 457 L~L~~n~~~~~~p~~~~~---------------~~L~~L~ls~n~l~~~~~----------------------------- 492 (968)
T PLN00113 457 LSLARNKFFGGLPDSFGS---------------KRLENLDLSRNQFSGAVP----------------------------- 492 (968)
T ss_pred EECcCceeeeecCccccc---------------ccceEEECcCCccCCccC-----------------------------
Confidence 999999998755443321 458899999998641100
Q ss_pred cCCCCccccccCCCCCcccCCCCCCCcEeeecCCCceEEEEcCCCCcc-cCCCCCCCCccccCceEEEEEecCCccccCC
Q psy8029 552 FGNAGVGINSVRPENLTCDTKPCPARCYCNFSPYYSIMSVNCSSASLT-HMPDYLPVTYEDKKATSIQLILHNNSINHFL 630 (693)
Q Consensus 552 ~~~~~~~~~~l~~~~l~c~~~~cp~~~~~~~~~~~~l~~l~ls~n~l~-~ip~~~~~l~~~~~~~l~~L~Ls~N~l~~~~ 630 (693)
. .+..+..++.+++++|.++ .+|+.+..+ ..++.|+|++|.+++.+
T Consensus 493 ------------------------~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~ 539 (968)
T PLN00113 493 ------------------------R----KLGSLSELMQLKLSENKLSGEIPDELSSC-----KKLVSLDLSHNQLSGQI 539 (968)
T ss_pred ------------------------h----hhhhhhccCEEECcCCcceeeCChHHcCc-----cCCCEEECCCCcccccC
Confidence 0 0112334788999999998 888888776 77899999999999999
Q ss_pred CCCCcccccCcEEEccCCccc-cccC---cCCCccEEEeeCCceeEecCCCccc
Q psy8029 631 ESPPESYKLITDLDLSYNNIS-HVDT---MYPYLNHLELIDSEKIICHGSTKPL 680 (693)
Q Consensus 631 ~~~~~~l~~L~~L~Ls~N~l~-~i~~---~~~~L~~L~l~~N~l~~~~~~~~~~ 680 (693)
|..++++++|+.|+|++|+++ .+|. .+++|++|++++|++...-++...+
T Consensus 540 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~ 593 (968)
T PLN00113 540 PASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAF 593 (968)
T ss_pred ChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchh
Confidence 999999999999999999999 7887 5789999999999998766555443
No 4
>KOG4194|consensus
Probab=100.00 E-value=5.8e-42 Score=345.76 Aligned_cols=373 Identities=24% Similarity=0.374 Sum_probs=220.3
Q ss_pred ccCCCCCCCCCccEEEEEcCCCCCccHHHHhhhcCcccccEEEeecCCCCccCCCCccCCC-cccccEEEccCCcCcccc
Q psy8029 39 YDRLPEQNLGPFNAVTFTFCPLPDENFISLFSKLNITTINTLAFSNSPSNVGVLSPPYFDG-LHFVKHILLSHNKEITGL 117 (693)
Q Consensus 39 ~~~l~~~~~~~l~~L~l~~c~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~l~~~~~~~-l~~L~~L~Ls~n~~i~~~ 117 (693)
+..++..-++..+.|+++++.+.+.++..+ ..+++|+++++..| .++.|| .|++ ..+|+.|+|.+| .|+.+
T Consensus 69 ~~~l~g~lp~~t~~LdlsnNkl~~id~~~f---~nl~nLq~v~l~~N--~Lt~IP--~f~~~sghl~~L~L~~N-~I~sv 140 (873)
T KOG4194|consen 69 KSRLKGFLPSQTQTLDLSNNKLSHIDFEFF---YNLPNLQEVNLNKN--ELTRIP--RFGHESGHLEKLDLRHN-LISSV 140 (873)
T ss_pred ccccCCcCccceeeeeccccccccCcHHHH---hcCCcceeeeeccc--hhhhcc--cccccccceeEEeeecc-ccccc
Confidence 444455444455566666666655554443 34555666666665 666665 2333 334666666666 66666
Q ss_pred cccccCCCCCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCCC
Q psy8029 118 HKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNV 197 (693)
Q Consensus 118 ~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 197 (693)
....++.++.|+.|||+.|.|++++...|..-.++++|+|++|+|+.+..+.|..+.+|..|.|+.|+++.++...|.++
T Consensus 141 ~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L 220 (873)
T KOG4194|consen 141 TSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRL 220 (873)
T ss_pred cHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhc
Confidence 66556666666666666666666665555555566666666666666666666666666666666666666666666666
Q ss_pred CCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCCCccccCChhhhhcccCceEEEEecCCCcccccCccccCCCCCccEE
Q psy8029 198 PNLRSLDISGNNISILPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEMKYLQVIKISYHKDSLKELPSGLFANLPLLNTV 277 (693)
Q Consensus 198 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~i~~~~~~~l~~L~~L 277 (693)
++|+.|+|..|+|..+.--.|.++++|+.|.+..|.+..+..++|..+.++++|+|+.|+ +..+..+++.++..|+.|
T Consensus 221 ~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~--l~~vn~g~lfgLt~L~~L 298 (873)
T KOG4194|consen 221 PKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNR--LQAVNEGWLFGLTSLEQL 298 (873)
T ss_pred chhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccch--hhhhhcccccccchhhhh
Confidence 666666666666655544446666666666666666666666666666666666666665 445555555556666666
Q ss_pred EcCCCCCcccCcccccCCCCccEEEecCCCCCCcCChhhhcCCCCCcEEEccCCCCCCCChhhhccCccCceEeccCCcC
Q psy8029 278 ILGESSIAELPSDLFWNSTNITNIVLTGHKKLTSLPSTLFRDCKKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQL 357 (693)
Q Consensus 278 ~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l 357 (693)
+++.|.|..+..+.+..+++|++|+++.| .++.++++.|..+..|++|.|++|.+..+....|..+.+|++|+|++|.+
T Consensus 299 ~lS~NaI~rih~d~WsftqkL~~LdLs~N-~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~l 377 (873)
T KOG4194|consen 299 DLSYNAIQRIHIDSWSFTQKLKELDLSSN-RITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNEL 377 (873)
T ss_pred ccchhhhheeecchhhhcccceeEecccc-ccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeE
Confidence 66666666655555555666666666666 66666666666666666666666666666666666666666666666665
Q ss_pred cc-ccCc----cCCCCCCeEeCCCCccccccccccCCCCCCcEEECCCCcCcccccccCCCCccCCCCCcEEECC
Q psy8029 358 EN-ITSL----VGLSGLNSLDLSWNQLEQINLIAFDGLSSLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLS 427 (693)
Q Consensus 358 ~~-l~~~----~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls 427 (693)
+. +.+. .++++|+.|++.+|++..+...+|.++++|++|+|.+|.|.... +.+|..+ .|++|.+.
T Consensus 378 s~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq----~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 378 SWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQ----PNAFEPM-ELKELVMN 447 (873)
T ss_pred EEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeec----ccccccc-hhhhhhhc
Confidence 54 2211 45566666666666666666666666666666666666555442 4455555 55555444
No 5
>KOG4237|consensus
Probab=100.00 E-value=3.2e-42 Score=333.13 Aligned_cols=413 Identities=25% Similarity=0.348 Sum_probs=278.8
Q ss_pred CCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCCCccccCChhhhhcccCceEEEEec-CCCcccccCccccCCCCCccEE
Q psy8029 199 NLRSLDISGNNISILPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEMKYLQVIKISY-HKDSLKELPSGLFANLPLLNTV 277 (693)
Q Consensus 199 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~-n~~~~~~i~~~~~~~l~~L~~L 277 (693)
.-..++|..|+|+.+|+++|+.+++|+.|+|++|.|+.|.+.+|.+++.+..|.+.+ |+ ++.+|.++|.++..++.|
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk--I~~l~k~~F~gL~slqrL 145 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK--ITDLPKGAFGGLSSLQRL 145 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc--hhhhhhhHhhhHHHHHHH
Confidence 345566666666666666666666666666666666666666666555555554444 44 445555555555555555
Q ss_pred EcCCCCCcccCcccccCCCCccEEEecCCCCCCcCChhhhcCCCCCcEEEccCCCCCCCChhhhccCccCceEeccCCcC
Q psy8029 278 ILGESSIAELPSDLFWNSTNITNIVLTGHKKLTSLPSTLFRDCKKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQL 357 (693)
Q Consensus 278 ~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l 357 (693)
.+.-|++..+...+|..++++..|.+.+| .+..++...|..+..++.+.+..|.+... .+++.+.. ++.-+.+
T Consensus 146 llNan~i~Cir~~al~dL~~l~lLslyDn-~~q~i~~~tf~~l~~i~tlhlA~np~icd-----CnL~wla~-~~a~~~i 218 (498)
T KOG4237|consen 146 LLNANHINCIRQDALRDLPSLSLLSLYDN-KIQSICKGTFQGLAAIKTLHLAQNPFICD-----CNLPWLAD-DLAMNPI 218 (498)
T ss_pred hcChhhhcchhHHHHHHhhhcchhcccch-hhhhhccccccchhccchHhhhcCccccc-----cccchhhh-HHhhchh
Confidence 55555555444444444444444444444 44444444444444444444444331100 00000000 0000000
Q ss_pred ccccCccCCCCCCeEeCCCCccccccccccCCC-CCCcEEECCCCcCcccccccCCCCccCCCCCcEEECCCCCCCcCCh
Q psy8029 358 ENITSLVGLSGLNSLDLSWNQLEQINLIAFDGL-SSLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLFD 436 (693)
Q Consensus 358 ~~l~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 436 (693)
..++..-..-..+.+.++..+.+..|... ..+..--.+.+...... ....|+.+++|+.|+|++|+|+++.+
T Consensus 219 ----etsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~c---P~~cf~~L~~L~~lnlsnN~i~~i~~ 291 (498)
T KOG4237|consen 219 ----ETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSIC---PAKCFKKLPNLRKLNLSNNKITRIED 291 (498)
T ss_pred ----hcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcC---hHHHHhhcccceEeccCCCccchhhh
Confidence 00222223333444555555555444321 11111111222222222 13458899999999999999999999
Q ss_pred hHHhcCCCCcEEECCCCCCccCCCcccccCCCccEEECCCCCCceeeccchhhhcccCCCCCccccccccCcEEEcCCCc
Q psy8029 437 DWISSMTSLKELDLRHNNFSFIPDQLDSIVSNKLTLDLSFNQIAIVDLRTLEIKAAAQDPNEDSTMVARSANIVILNDNP 516 (693)
Q Consensus 437 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~l~~Np 516 (693)
.+|.+...+++|.|..|+|..+....|.+++.|+.|+|++|+|+.+.+.+|+.+. .+..+.+-.||
T Consensus 292 ~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~--------------~l~~l~l~~Np 357 (498)
T KOG4237|consen 292 GAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLF--------------SLSTLNLLSNP 357 (498)
T ss_pred hhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccc--------------eeeeeehccCc
Confidence 9999999999999999999999999999999999999999999999999998764 47899999999
Q ss_pred ccccCCcHHHHHHHhcccccceeeeeeeccCceeecCC---CCccccccCCCCCcccCC---------CCCCCcEeeecC
Q psy8029 517 IACNCSNYDLIRFVSKKMTKTVYQMLELVTDNLECFGN---AGVGINSVRPENLTCDTK---------PCPARCYCNFSP 584 (693)
Q Consensus 517 ~~c~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~---~~~~~~~l~~~~l~c~~~---------~cp~~~~~~~~~ 584 (693)
|.|+|.+.|+..|++++- ...+..|..| ++.++.++...++.|.-+ +||..|.|.
T Consensus 358 ~~CnC~l~wl~~Wlr~~~----------~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~--- 424 (498)
T KOG4237|consen 358 FNCNCRLAWLGEWLRKKS----------VVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCL--- 424 (498)
T ss_pred ccCccchHHHHHHHhhCC----------CCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchh---
Confidence 999999999999999862 3346789988 888999999999988743 599999887
Q ss_pred CCceEEEEcCCCCcccCCCCCCCCccccCceEEEEEecCCccccCCCCCCcccccCcEEEccCCccccccC----cCCCc
Q psy8029 585 YYSIMSVNCSSASLTHMPDYLPVTYEDKKATSIQLILHNNSINHFLESPPESYKLITDLDLSYNNISHVDT----MYPYL 660 (693)
Q Consensus 585 ~~~l~~l~ls~n~l~~ip~~~~~l~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~----~~~~L 660 (693)
-+++.||++.++.+|..++.. .++|++.+|.++.++.+ .++.| .+|+++|+++.+.. .++.|
T Consensus 425 ---~tVvRcSnk~lk~lp~~iP~d-------~telyl~gn~~~~vp~~---~~~~l-~~dls~n~i~~Lsn~tf~n~tql 490 (498)
T KOG4237|consen 425 ---DTVVRCSNKLLKLLPRGIPVD-------VTELYLDGNAITSVPDE---LLRSL-LLDLSNNRISSLSNYTFSNMTQL 490 (498)
T ss_pred ---hhhHhhcccchhhcCCCCCch-------hHHHhcccchhcccCHH---HHhhh-hcccccCceehhhcccccchhhh
Confidence 468899999999999998865 57899999999988765 67788 99999999998877 56889
Q ss_pred cEEEeeCC
Q psy8029 661 NHLELIDS 668 (693)
Q Consensus 661 ~~L~l~~N 668 (693)
.+|-|++|
T Consensus 491 ~tlilsyn 498 (498)
T KOG4237|consen 491 STLILSYN 498 (498)
T ss_pred heeEEecC
Confidence 99999887
No 6
>KOG0472|consensus
Probab=100.00 E-value=1.7e-39 Score=314.54 Aligned_cols=475 Identities=23% Similarity=0.335 Sum_probs=295.8
Q ss_pred ccEEEccCCcCcccccccccCCCCCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEcc
Q psy8029 103 VKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLD 182 (693)
Q Consensus 103 L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 182 (693)
|+.+.+++| .+..+.++ ..++..|.+|++++|+++.+|+.+ +.+..++.++.++|++..+++. +..+.+|+.++.+
T Consensus 47 l~~lils~N-~l~~l~~d-l~nL~~l~vl~~~~n~l~~lp~ai-g~l~~l~~l~vs~n~ls~lp~~-i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 47 LQKLILSHN-DLEVLRED-LKNLACLTVLNVHDNKLSQLPAAI-GELEALKSLNVSHNKLSELPEQ-IGSLISLVKLDCS 122 (565)
T ss_pred hhhhhhccC-chhhccHh-hhcccceeEEEeccchhhhCCHHH-HHHHHHHHhhcccchHhhccHH-Hhhhhhhhhhhcc
Confidence 445555555 55444443 344555555555555555555442 5555555555555555555433 3455555555555
Q ss_pred CCCCCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCCCccccCChhhhhcccCceEEEEecCCCcccc
Q psy8029 183 HNQLINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEMKYLQVIKISYHKDSLKE 262 (693)
Q Consensus 183 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~ 262 (693)
+|.+..++++ ++.+..|+.++..+|+++++|++ +.++.+|..+++.+|.+...++.... ++.|++++...|. .+.
T Consensus 123 ~n~~~el~~~-i~~~~~l~dl~~~~N~i~slp~~-~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~--L~t 197 (565)
T KOG0472|consen 123 SNELKELPDS-IGRLLDLEDLDATNNQISSLPED-MVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNL--LET 197 (565)
T ss_pred ccceeecCch-HHHHhhhhhhhccccccccCchH-HHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhh--hhc
Confidence 5555555443 34555555555555555555544 23455555566666666655555443 5666666655555 445
Q ss_pred cCccccCCCCCccEEEcCCCCCcccCcccccCCCCccEEEecCCCCCCcCChhhhcCCCCCcEEEccCCCCCCCChhhhc
Q psy8029 263 LPSGLFANLPLLNTVILGESSIAELPSDLFWNSTNITNIVLTGHKKLTSLPSTLFRDCKKLVKLELQRNKLKYLPENLFE 342 (693)
Q Consensus 263 i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 342 (693)
+|+. ++.+.+|..|++..|++..+| .|.+|..|++++++.| ++..+|....++++++..||+.+|+++++|.++ .
T Consensus 198 lP~~-lg~l~~L~~LyL~~Nki~~lP--ef~gcs~L~Elh~g~N-~i~~lpae~~~~L~~l~vLDLRdNklke~Pde~-c 272 (565)
T KOG0472|consen 198 LPPE-LGGLESLELLYLRRNKIRFLP--EFPGCSLLKELHVGEN-QIEMLPAEHLKHLNSLLVLDLRDNKLKEVPDEI-C 272 (565)
T ss_pred CChh-hcchhhhHHHHhhhcccccCC--CCCccHHHHHHHhccc-HHHhhHHHHhcccccceeeeccccccccCchHH-H
Confidence 5555 456666666666666666666 3566666667766666 666677666667777777777777777777664 4
Q ss_pred cCccCceEeccCCcCccccCc-cCCCCCCeEeCCCCccccccccccCCCC--CCcEEE-------CCCCcCccc----cc
Q psy8029 343 SLKELYTLNLKNNQLENITSL-VGLSGLNSLDLSWNQLEQINLIAFDGLS--SLNTVD-------LSHNLLTFD----EY 408 (693)
Q Consensus 343 ~~~~L~~L~Ls~n~l~~l~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~--~L~~L~-------L~~n~l~~~----~~ 408 (693)
-+++|..||+++|.|+++|.. +++ .|+.|-+.+|.+..+..+.+..-+ -|++|. ++...=... ..
T Consensus 273 lLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~ 351 (565)
T KOG0472|consen 273 LLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLP 351 (565)
T ss_pred HhhhhhhhcccCCccccCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCC
Confidence 566677777777777777666 555 677777777776655443332210 111111 111100000 00
Q ss_pred ccCCCCccCCCCCcEEECCCCCCCcCChhHHhcCC--CCcEEECCCCCCccCCCcccccCCC-ccEEECCCCCCceeecc
Q psy8029 409 QYGYSPLKQCVNLETINLSYNRISSLFDDWISSMT--SLKELDLRHNNFSFIPDQLDSIVSN-KLTLDLSFNQIAIVDLR 485 (693)
Q Consensus 409 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~ 485 (693)
...........+.+.|++++-+++.++...|.... -...+++++|++.++|.. +..+.. .+.+.+++|.++.++.
T Consensus 352 ~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~-L~~lkelvT~l~lsnn~isfv~~- 429 (565)
T KOG0472|consen 352 SESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKR-LVELKELVTDLVLSNNKISFVPL- 429 (565)
T ss_pred CCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhh-hHHHHHHHHHHHhhcCccccchH-
Confidence 01122234456788999999999999888776443 378899999999998876 233333 3567888888876542
Q ss_pred chhhhcccCCCCCccccccccCcEEEcCCCcccccCCcHHHHHHHhcccccceeeeeeeccCceeecCCCCccccccCCC
Q psy8029 486 TLEIKAAAQDPNEDSTMVARSANIVILNDNPIACNCSNYDLIRFVSKKMTKTVYQMLELVTDNLECFGNAGVGINSVRPE 565 (693)
Q Consensus 486 ~~~~l~~~~~~~~~~~~~~~~l~~l~l~~Np~~c~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~l~~~ 565 (693)
.+..+ +++..+++++|++. + ++.+
T Consensus 430 ~l~~l--------------~kLt~L~L~NN~Ln-~-------------LP~e---------------------------- 453 (565)
T KOG0472|consen 430 ELSQL--------------QKLTFLDLSNNLLN-D-------------LPEE---------------------------- 453 (565)
T ss_pred HHHhh--------------hcceeeecccchhh-h-------------cchh----------------------------
Confidence 22222 45778899988751 1 1100
Q ss_pred CCcccCCCCCCCcEeeecCCCceEEEEcCCCCcccCCCCCCCCccccCceEEEEEecCCccccCCCCCCcccccCcEEEc
Q psy8029 566 NLTCDTKPCPARCYCNFSPYYSIMSVNCSSASLTHMPDYLPVTYEDKKATSIQLILHNNSINHFLESPPESYKLITDLDL 645 (693)
Q Consensus 566 ~l~c~~~~cp~~~~~~~~~~~~l~~l~ls~n~l~~ip~~~~~l~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 645 (693)
+..+..++.+|+|.|++..+|...-.. ..+..+--++|++..++++.+.++++|.+|||
T Consensus 454 ----------------~~~lv~Lq~LnlS~NrFr~lP~~~y~l-----q~lEtllas~nqi~~vd~~~l~nm~nL~tLDL 512 (565)
T KOG0472|consen 454 ----------------MGSLVRLQTLNLSFNRFRMLPECLYEL-----QTLETLLASNNQIGSVDPSGLKNMRNLTTLDL 512 (565)
T ss_pred ----------------hhhhhhhheecccccccccchHHHhhH-----HHHHHHHhccccccccChHHhhhhhhcceecc
Confidence 011233789999999999999866554 23344555669999999999999999999999
Q ss_pred cCCccccccC---cCCCccEEEeeCCcee
Q psy8029 646 SYNNISHVDT---MYPYLNHLELIDSEKI 671 (693)
Q Consensus 646 s~N~l~~i~~---~~~~L~~L~l~~N~l~ 671 (693)
.+|.+..||+ .+++|++|++.|||+.
T Consensus 513 ~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 513 QNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred CCCchhhCChhhccccceeEEEecCCccC
Confidence 9999999999 7899999999999987
No 7
>KOG0472|consensus
Probab=100.00 E-value=3e-38 Score=305.90 Aligned_cols=478 Identities=22% Similarity=0.290 Sum_probs=356.0
Q ss_pred cccccEEEeecCCCCccCCCCccCCCcccccEEEccCCcCcccccccccCCCCCCcEEEeeCCcccccCcccCCCCCCCc
Q psy8029 74 ITTINTLAFSNSPSNVGVLSPPYFDGLHFVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQ 153 (693)
Q Consensus 74 ~~~L~~L~l~~~~~~i~~l~~~~~~~l~~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 153 (693)
...++.+.++++ .++.+. ..+.++..|.+|++++| ++...|+. ++.+..++.++.++|+++.+|+.. ..+.+|+
T Consensus 44 qv~l~~lils~N--~l~~l~-~dl~nL~~l~vl~~~~n-~l~~lp~a-ig~l~~l~~l~vs~n~ls~lp~~i-~s~~~l~ 117 (565)
T KOG0472|consen 44 QVDLQKLILSHN--DLEVLR-EDLKNLACLTVLNVHDN-KLSQLPAA-IGELEALKSLNVSHNKLSELPEQI-GSLISLV 117 (565)
T ss_pred hcchhhhhhccC--chhhcc-HhhhcccceeEEEeccc-hhhhCCHH-HHHHHHHHHhhcccchHhhccHHH-hhhhhhh
Confidence 445788889888 888777 57888999999999999 88888876 577888999999999998888874 7788999
Q ss_pred EEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCCCc
Q psy8029 154 VLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFYANSNR 233 (693)
Q Consensus 154 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~ 233 (693)
.++.++|.+..++++ ++.+..|+.++..+|+++..++. +.++.+|..+++.+|.++..++.... ++.|++|+...|.
T Consensus 118 ~l~~s~n~~~el~~~-i~~~~~l~dl~~~~N~i~slp~~-~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~ 194 (565)
T KOG0472|consen 118 KLDCSSNELKELPDS-IGRLLDLEDLDATNNQISSLPED-MVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNL 194 (565)
T ss_pred hhhccccceeecCch-HHHHhhhhhhhccccccccCchH-HHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhh
Confidence 999999998888766 67788899999999999888765 57888999999999999998887665 8999999999999
Q ss_pred cccCChhhhhcccCceEEEEecCCCcccccCccccCCCCCccEEEcCCCCCcccCcccccCCCCccEEEecCCCCCCcCC
Q psy8029 234 FQMFPKDLFAEMKYLQVIKISYHKDSLKELPSGLFANLPLLNTVILGESSIAELPSDLFWNSTNITNIVLTGHKKLTSLP 313 (693)
Q Consensus 234 l~~~~~~~~~~~~~L~~L~l~~n~~~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~l~~l~ 313 (693)
++.+|+. ++.+.+|+.|++..|+ +..+|+ |.+|..|.+++++.|.+..+|+.....+.++..|++.+| ++.++|
T Consensus 195 L~tlP~~-lg~l~~L~~LyL~~Nk--i~~lPe--f~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdN-klke~P 268 (565)
T KOG0472|consen 195 LETLPPE-LGGLESLELLYLRRNK--IRFLPE--FPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDN-KLKEVP 268 (565)
T ss_pred hhcCChh-hcchhhhHHHHhhhcc--cccCCC--CCccHHHHHHHhcccHHHhhHHHHhcccccceeeecccc-ccccCc
Confidence 9999987 5789999999999998 667884 889999999999999999999888888999999999999 999999
Q ss_pred hhhhcCCCCCcEEEccCCCCCCCChhhhccCccCceEeccCCcCccccCc--cC--CCCCCeEe-------CCCCcc---
Q psy8029 314 STLFRDCKKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLENITSL--VG--LSGLNSLD-------LSWNQL--- 379 (693)
Q Consensus 314 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~l~~~--~~--l~~L~~L~-------Ls~n~l--- 379 (693)
.++ .-+.+|+.||+++|.++.+|... +++ +|+.|.+.+|.+..+... .+ -.-|++|. ++.-.=
T Consensus 269 de~-clLrsL~rLDlSNN~is~Lp~sL-gnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e 345 (565)
T KOG0472|consen 269 DEI-CLLRSLERLDLSNNDISSLPYSL-GNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTE 345 (565)
T ss_pred hHH-HHhhhhhhhcccCCccccCCccc-ccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCccccc
Confidence 886 46788999999999999999864 778 899999999998765432 00 00111111 111100
Q ss_pred c--cccccccC---CCCCCcEEECCCCcCcccccccCCCCccC--CCCCcEEECCCCCCCcCChhHHhcCCCC-cEEECC
Q psy8029 380 E--QINLIAFD---GLSSLNTVDLSHNLLTFDEYQYGYSPLKQ--CVNLETINLSYNRISSLFDDWISSMTSL-KELDLR 451 (693)
Q Consensus 380 ~--~~~~~~~~---~l~~L~~L~L~~n~l~~~~~~~~~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~L~ 451 (693)
+ +..+..|. ...+.+.|++++-+++... ...|.. -.-...++++.|++..++.. +..+..+ +.+.++
T Consensus 346 ~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VP----dEVfea~~~~~Vt~VnfskNqL~elPk~-L~~lkelvT~l~ls 420 (565)
T KOG0472|consen 346 TAMTLPSESFPDIYAIITTKILDVSDKQLTLVP----DEVFEAAKSEIVTSVNFSKNQLCELPKR-LVELKELVTDLVLS 420 (565)
T ss_pred ccCCCCCCcccchhhhhhhhhhcccccccccCC----HHHHHHhhhcceEEEecccchHhhhhhh-hHHHHHHHHHHHhh
Confidence 0 00111222 2456788888887777552 122221 12377888999988887655 3444443 345556
Q ss_pred CCCCccCCCcccccCCCccEEECCCCCCceeeccchhhhcccCCCCCccccccccCcEEEcCCCcccccCCcHHHHHHHh
Q psy8029 452 HNNFSFIPDQLDSIVSNKLTLDLSFNQIAIVDLRTLEIKAAAQDPNEDSTMVARSANIVILNDNPIACNCSNYDLIRFVS 531 (693)
Q Consensus 452 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~l~~Np~~c~C~~~~~~~~~~ 531 (693)
+|.++.+ +..+..++++..|+|++|.+..++.+...- ..++.++++.|.|.|-=.....
T Consensus 421 nn~isfv-~~~l~~l~kLt~L~L~NN~Ln~LP~e~~~l---------------v~Lq~LnlS~NrFr~lP~~~y~----- 479 (565)
T KOG0472|consen 421 NNKISFV-PLELSQLQKLTFLDLSNNLLNDLPEEMGSL---------------VRLQTLNLSFNRFRMLPECLYE----- 479 (565)
T ss_pred cCccccc-hHHHHhhhcceeeecccchhhhcchhhhhh---------------hhhheecccccccccchHHHhh-----
Confidence 6655544 444778888889999998888876554332 2377889999887651100000
Q ss_pred cccccceeeeeeeccCceeecCCCCccccccCCCCCcccCCCCCCCcEeeecCCCceEEEEcCCCCcccCCCC-CCCCcc
Q psy8029 532 KKMTKTVYQMLELVTDNLECFGNAGVGINSVRPENLTCDTKPCPARCYCNFSPYYSIMSVNCSSASLTHMPDY-LPVTYE 610 (693)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~l~~~~l~c~~~~cp~~~~~~~~~~~~l~~l~ls~n~l~~ip~~-~~~l~~ 610 (693)
...++.+-.+.|++..+|+. +..+
T Consensus 480 -----------------------------------------------------lq~lEtllas~nqi~~vd~~~l~nm-- 504 (565)
T KOG0472|consen 480 -----------------------------------------------------LQTLETLLASNNQIGSVDPSGLKNM-- 504 (565)
T ss_pred -----------------------------------------------------HHHHHHHHhccccccccChHHhhhh--
Confidence 11123333455777777655 5555
Q ss_pred ccCceEEEEEecCCccccCCCCCCcccccCcEEEccCCccccccC
Q psy8029 611 DKKATSIQLILHNNSINHFLESPPESYKLITDLDLSYNNISHVDT 655 (693)
Q Consensus 611 ~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~ 655 (693)
..++.|||.+|.|..+||. ++++++|+.|++.+|.++ .|.
T Consensus 505 ---~nL~tLDL~nNdlq~IPp~-LgnmtnL~hLeL~gNpfr-~Pr 544 (565)
T KOG0472|consen 505 ---RNLTTLDLQNNDLQQIPPI-LGNMTNLRHLELDGNPFR-QPR 544 (565)
T ss_pred ---hhcceeccCCCchhhCChh-hccccceeEEEecCCccC-CCH
Confidence 6788999999999988886 899999999999999999 444
No 8
>KOG0618|consensus
Probab=99.97 E-value=4.3e-34 Score=304.16 Aligned_cols=398 Identities=21% Similarity=0.260 Sum_probs=244.7
Q ss_pred ccEEEEEcCCCCCccHHHHhhhcCcccccEEEeecCCCCccCCCCccCCCcccccEEEccCCcCcccccccccCCCCCCc
Q psy8029 50 FNAVTFTFCPLPDENFISLFSKLNITTINTLAFSNSPSNVGVLSPPYFDGLHFVKHILLSHNKEITGLHKDIFKGTPQLE 129 (693)
Q Consensus 50 l~~L~l~~c~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~l~~~~~~~l~~L~~L~Ls~n~~i~~~~~~~~~~l~~L~ 129 (693)
+..|.++.+.+-...+..+-. .++ |+.|+++++ .+...+ ..+..+++|+.|.++.| .|..++. ...++.+|+
T Consensus 23 ~~~ln~~~N~~l~~pl~~~~~--~v~-L~~l~lsnn--~~~~fp-~~it~l~~L~~ln~s~n-~i~~vp~-s~~~~~~l~ 94 (1081)
T KOG0618|consen 23 LQILNLRRNSLLSRPLEFVEK--RVK-LKSLDLSNN--QISSFP-IQITLLSHLRQLNLSRN-YIRSVPS-SCSNMRNLQ 94 (1081)
T ss_pred HHhhhccccccccCchHHhhh--eee-eEEeecccc--ccccCC-chhhhHHHHhhcccchh-hHhhCch-hhhhhhcch
Confidence 455555555444433222211 223 666666666 555554 34555666667777766 6666663 355666677
Q ss_pred EEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCCCCCCcEEECcCCC
Q psy8029 130 SLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNVPNLRSLDISGNN 209 (693)
Q Consensus 130 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 209 (693)
+|.|.+|.+..+|.+ +..+.+|+.|++++|.+..++.- +..+..+..+..++|..... ++.. ..+.+++..|.
T Consensus 95 ~lnL~~n~l~~lP~~-~~~lknl~~LdlS~N~f~~~Pl~-i~~lt~~~~~~~s~N~~~~~----lg~~-~ik~~~l~~n~ 167 (1081)
T KOG0618|consen 95 YLNLKNNRLQSLPAS-ISELKNLQYLDLSFNHFGPIPLV-IEVLTAEEELAASNNEKIQR----LGQT-SIKKLDLRLNV 167 (1081)
T ss_pred hheeccchhhcCchh-HHhhhcccccccchhccCCCchh-HHhhhHHHHHhhhcchhhhh----hccc-cchhhhhhhhh
Confidence 777766666666654 46666677777777666655433 45566666666666611111 1111 16666666666
Q ss_pred CCcCCCCcCCCCCCCcEEEcCCCccccCChhhhhcccCceEEEEecCCCcccccCccccCCCCCccEEEcCCCCCcccCc
Q psy8029 210 ISILPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEMKYLQVIKISYHKDSLKELPSGLFANLPLLNTVILGESSIAELPS 289 (693)
Q Consensus 210 i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~ 289 (693)
+..-.......++. .|+|.+|.+.... +..+.+|+.+....|++. .+. -.-++++.|+.+.|.+..+..
T Consensus 168 l~~~~~~~i~~l~~--~ldLr~N~~~~~d---ls~~~~l~~l~c~rn~ls--~l~----~~g~~l~~L~a~~n~l~~~~~ 236 (1081)
T KOG0618|consen 168 LGGSFLIDIYNLTH--QLDLRYNEMEVLD---LSNLANLEVLHCERNQLS--ELE----ISGPSLTALYADHNPLTTLDV 236 (1081)
T ss_pred cccchhcchhhhhe--eeecccchhhhhh---hhhccchhhhhhhhcccc--eEE----ecCcchheeeeccCcceeecc
Confidence 65433333344443 5777777766222 455677777777777632 221 134577777777777764332
Q ss_pred ccccCCCCccEEEecCCCCCCcCChhhhcCCCCCcEEEccCCCCCCCChhhhccCccCceEeccCCcCccccCc-cCCCC
Q psy8029 290 DLFWNSTNITNIVLTGHKKLTSLPSTLFRDCKKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLENITSL-VGLSG 368 (693)
Q Consensus 290 ~~~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~l~~~-~~l~~ 368 (693)
. ....+|+.++++.| .+..+| .+...+.+|+.++..+|.++.+|...+ ...+|+.|....|.+..+|.. .+.++
T Consensus 237 ~--p~p~nl~~~dis~n-~l~~lp-~wi~~~~nle~l~~n~N~l~~lp~ri~-~~~~L~~l~~~~nel~yip~~le~~~s 311 (1081)
T KOG0618|consen 237 H--PVPLNLQYLDISHN-NLSNLP-EWIGACANLEALNANHNRLVALPLRIS-RITSLVSLSAAYNELEYIPPFLEGLKS 311 (1081)
T ss_pred c--cccccceeeecchh-hhhcch-HHHHhcccceEecccchhHHhhHHHHh-hhhhHHHHHhhhhhhhhCCCcccccce
Confidence 1 23457788888887 777777 444677888888888888877777653 567788888888888877777 56778
Q ss_pred CCeEeCCCCccccccccccCCCCC-CcEEECCCCcCcccccccCCCCccCCCCCcEEECCCCCCCcCChhHHhcCCCCcE
Q psy8029 369 LNSLDLSWNQLEQINLIAFDGLSS-LNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLFDDWISSMTSLKE 447 (693)
Q Consensus 369 L~~L~Ls~n~l~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 447 (693)
|++|+|..|.+...+...|.-... |+.|+.+.|++.... ...-...+.|+.|.+.+|.+++-....+.+.++|+.
T Consensus 312 L~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp----~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKV 387 (1081)
T KOG0618|consen 312 LRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLP----SYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKV 387 (1081)
T ss_pred eeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccc----cccchhhHHHHHHHHhcCcccccchhhhccccceee
Confidence 888888888877777655554443 667777777666442 122233456677777777777654445666677777
Q ss_pred EECCCCCCccCCCcccccCCCccEEECCCCCCcee
Q psy8029 448 LDLRHNNFSFIPDQLDSIVSNKLTLDLSFNQIAIV 482 (693)
Q Consensus 448 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 482 (693)
|+|++|++..+|...+..++.|+.|+||+|+++.+
T Consensus 388 LhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~L 422 (1081)
T KOG0618|consen 388 LHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTL 422 (1081)
T ss_pred eeecccccccCCHHHHhchHHhHHHhcccchhhhh
Confidence 77777777777666666666666666666666644
No 9
>KOG0618|consensus
Probab=99.96 E-value=3.5e-32 Score=289.69 Aligned_cols=415 Identities=21% Similarity=0.209 Sum_probs=307.2
Q ss_pred EEEEcCCCCCccHHHHhhhcCcccccEEEeecCCCCccCCCCccCCCcccccEEEccCCcCcccccccccCCCCCCcEEE
Q psy8029 53 VTFTFCPLPDENFISLFSKLNITTINTLAFSNSPSNVGVLSPPYFDGLHFVKHILLSHNKEITGLHKDIFKGTPQLESLN 132 (693)
Q Consensus 53 L~l~~c~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~l~~~~~~~l~~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~ 132 (693)
++.+.|.++-....-. . -..++.|++..| .+-..|-....+.-+|+.||+++| .+...|.. +..+++|+.|+
T Consensus 3 vd~s~~~l~~ip~~i~-~---~~~~~~ln~~~N--~~l~~pl~~~~~~v~L~~l~lsnn-~~~~fp~~-it~l~~L~~ln 74 (1081)
T KOG0618|consen 3 VDASDEQLELIPEQIL-N---NEALQILNLRRN--SLLSRPLEFVEKRVKLKSLDLSNN-QISSFPIQ-ITLLSHLRQLN 74 (1081)
T ss_pred cccccccCcccchhhc-c---HHHHHhhhcccc--ccccCchHHhhheeeeEEeecccc-ccccCCch-hhhHHHHhhcc
Confidence 4566676654332222 1 122677888877 555555445566667999999999 88887765 56788999999
Q ss_pred eeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCCCCCCcEEECcCC-CCC
Q psy8029 133 LRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNVPNLRSLDISGN-NIS 211 (693)
Q Consensus 133 L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n-~i~ 211 (693)
++.|-|..+|.. ..++.+|+++.|.+|.+...+.. +..+.+|++|++++|++..++.- +..+..++.+..++| .+.
T Consensus 75 ~s~n~i~~vp~s-~~~~~~l~~lnL~~n~l~~lP~~-~~~lknl~~LdlS~N~f~~~Pl~-i~~lt~~~~~~~s~N~~~~ 151 (1081)
T KOG0618|consen 75 LSRNYIRSVPSS-CSNMRNLQYLNLKNNRLQSLPAS-ISELKNLQYLDLSFNHFGPIPLV-IEVLTAEEELAASNNEKIQ 151 (1081)
T ss_pred cchhhHhhCchh-hhhhhcchhheeccchhhcCchh-HHhhhcccccccchhccCCCchh-HHhhhHHHHHhhhcchhhh
Confidence 999999888854 57889999999999988777544 78899999999999999877654 567788888889988 222
Q ss_pred cCCCCcCCCCCCCcEEEcCCCccccCChhhhhcccCceEEEEecCCCcccccCccccCCCCCccEEEcCCCCCcccCccc
Q psy8029 212 ILPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEMKYLQVIKISYHKDSLKELPSGLFANLPLLNTVILGESSIAELPSDL 291 (693)
Q Consensus 212 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 291 (693)
.++ ... .+.+++..|.+..-.......+.. .+++.+|. +.. .....+++|+.+....|++..+.
T Consensus 152 ~lg-----~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~--~~~---~dls~~~~l~~l~c~rn~ls~l~--- 215 (1081)
T KOG0618|consen 152 RLG-----QTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNE--MEV---LDLSNLANLEVLHCERNQLSELE--- 215 (1081)
T ss_pred hhc-----ccc-chhhhhhhhhcccchhcchhhhhe--eeecccch--hhh---hhhhhccchhhhhhhhcccceEE---
Confidence 222 222 677777777666322222334444 68999887 321 22567888999999888887664
Q ss_pred ccCCCCccEEEecCCCCCCcCChhhhcCCCCCcEEEccCCCCCCCChhhhccCccCceEeccCCcCccccCc-cCCCCCC
Q psy8029 292 FWNSTNITNIVLTGHKKLTSLPSTLFRDCKKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLENITSL-VGLSGLN 370 (693)
Q Consensus 292 ~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~l~~~-~~l~~L~ 370 (693)
-..++++.|+.+.| .+..+... ....+|+.++++.|+++.+| .+...+.+|+.++..+|+++.+|.. ...++|+
T Consensus 216 -~~g~~l~~L~a~~n-~l~~~~~~--p~p~nl~~~dis~n~l~~lp-~wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~ 290 (1081)
T KOG0618|consen 216 -ISGPSLTALYADHN-PLTTLDVH--PVPLNLQYLDISHNNLSNLP-EWIGACANLEALNANHNRLVALPLRISRITSLV 290 (1081)
T ss_pred -ecCcchheeeeccC-cceeeccc--cccccceeeecchhhhhcch-HHHHhcccceEecccchhHHhhHHHHhhhhhHH
Confidence 23478899999998 55543332 23467999999999999999 5568899999999999999887766 7788999
Q ss_pred eEeCCCCccccccccccCCCCCCcEEECCCCcCcccccccCCCCccCCC-CCcEEECCCCCCCcCChhHHhcCCCCcEEE
Q psy8029 371 SLDLSWNQLEQINLIAFDGLSSLNTVDLSHNLLTFDEYQYGYSPLKQCV-NLETINLSYNRISSLFDDWISSMTSLKELD 449 (693)
Q Consensus 371 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 449 (693)
.|.+.+|.++.+++ ...+.++|++|+|..|.+.... ...+.... +|+.|+.+.|.+...+...=...+.|+.|.
T Consensus 291 ~l~~~~nel~yip~-~le~~~sL~tLdL~~N~L~~lp----~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~Ly 365 (1081)
T KOG0618|consen 291 SLSAAYNELEYIPP-FLEGLKSLRTLDLQSNNLPSLP----DNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELY 365 (1081)
T ss_pred HHHhhhhhhhhCCC-cccccceeeeeeehhccccccc----hHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHH
Confidence 99999999988876 4566889999999999988653 22233333 377888888888876643333667899999
Q ss_pred CCCCCCccCCCcccccCCCccEEECCCCCCceeeccchhhhcccCCCCCccccccccCcEEEcCCCccc
Q psy8029 450 LRHNNFSFIPDQLDSIVSNKLTLDLSFNQIAIVDLRTLEIKAAAQDPNEDSTMVARSANIVILNDNPIA 518 (693)
Q Consensus 450 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~l~~Np~~ 518 (693)
+.+|.+++--...+.++..|+.|+|++|++..++...+..+ ..|+.|+|+||.+.
T Consensus 366 lanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kl--------------e~LeeL~LSGNkL~ 420 (1081)
T KOG0618|consen 366 LANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKL--------------EELEELNLSGNKLT 420 (1081)
T ss_pred HhcCcccccchhhhccccceeeeeecccccccCCHHHHhch--------------HHhHHHhcccchhh
Confidence 99999997666667888999999999999998888777766 34788999999863
No 10
>KOG0444|consensus
Probab=99.96 E-value=8.4e-32 Score=274.06 Aligned_cols=360 Identities=24% Similarity=0.376 Sum_probs=236.4
Q ss_pred cccccEEEeecCCCCcc-CCCCccCCCcccccEEEccCCcCcccccccccCCCCCCcEEEeeCCcccccCcccCCCCCCC
Q psy8029 74 ITTINTLAFSNSPSNVG-VLSPPYFDGLHFVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKL 152 (693)
Q Consensus 74 ~~~L~~L~l~~~~~~i~-~l~~~~~~~l~~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 152 (693)
++.++-+|+++| .++ .-.+.....++.++.|.|... ++..+|.. ++.+.+|+.|.+++|++..+... ++.++.|
T Consensus 6 LpFVrGvDfsgN--DFsg~~FP~~v~qMt~~~WLkLnrt-~L~~vPeE-L~~lqkLEHLs~~HN~L~~vhGE-Ls~Lp~L 80 (1255)
T KOG0444|consen 6 LPFVRGVDFSGN--DFSGDRFPHDVEQMTQMTWLKLNRT-KLEQVPEE-LSRLQKLEHLSMAHNQLISVHGE-LSDLPRL 80 (1255)
T ss_pred cceeecccccCC--cCCCCcCchhHHHhhheeEEEechh-hhhhChHH-HHHHhhhhhhhhhhhhhHhhhhh-hccchhh
Confidence 456788888888 777 444567778889999999888 88888866 67888899999999988877655 5788889
Q ss_pred cEEEcCCCCCC--ccChhhhCCCCCCCEEEccCCCCCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcC
Q psy8029 153 QVLDLGSNDVA--YMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFYAN 230 (693)
Q Consensus 153 ~~L~Ls~n~l~--~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 230 (693)
+.+++..|++. +++++. -.+..|+.||||+|++.+.+.. +....++-.|+|++|+|..||...|.+++.|-.|+|+
T Consensus 81 Rsv~~R~N~LKnsGiP~di-F~l~dLt~lDLShNqL~EvP~~-LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS 158 (1255)
T KOG0444|consen 81 RSVIVRDNNLKNSGIPTDI-FRLKDLTILDLSHNQLREVPTN-LEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLS 158 (1255)
T ss_pred HHHhhhccccccCCCCchh-cccccceeeecchhhhhhcchh-hhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccc
Confidence 99999888765 677664 4688899999999998887654 5777888889999999998888888888888888999
Q ss_pred CCccccCChhhhhcccCceEEEEecCCCcccccCccccCCCCCccEEEcCCCC--CcccCcccccCCCCccEEEecCCCC
Q psy8029 231 SNRFQMFPKDLFAEMKYLQVIKISYHKDSLKELPSGLFANLPLLNTVILGESS--IAELPSDLFWNSTNITNIVLTGHKK 308 (693)
Q Consensus 231 ~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~i~~~~~~~l~~L~~L~l~~n~--l~~~~~~~~~~~~~L~~L~l~~n~~ 308 (693)
+|++..+|+. ...+..|++|++++|.... ..-..+..+..|+.|.+++.+ +..+|.. +.++.+|..++++.| .
T Consensus 159 ~NrLe~LPPQ-~RRL~~LqtL~Ls~NPL~h--fQLrQLPsmtsL~vLhms~TqRTl~N~Pts-ld~l~NL~dvDlS~N-~ 233 (1255)
T KOG0444|consen 159 NNRLEMLPPQ-IRRLSMLQTLKLSNNPLNH--FQLRQLPSMTSLSVLHMSNTQRTLDNIPTS-LDDLHNLRDVDLSEN-N 233 (1255)
T ss_pred cchhhhcCHH-HHHHhhhhhhhcCCChhhH--HHHhcCccchhhhhhhcccccchhhcCCCc-hhhhhhhhhcccccc-C
Confidence 9988888887 4678888888888887321 111112344556666666654 2334433 244555666666655 5
Q ss_pred CCcCChhhhcCCCCCcEEEccCCCCCCCChhhhccCccCceEeccCCcCccccCc-cCCCCCCeEeCCCCccc--ccccc
Q psy8029 309 LTSLPSTLFRDCKKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLENITSL-VGLSGLNSLDLSWNQLE--QINLI 385 (693)
Q Consensus 309 l~~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~l~~~-~~l~~L~~L~Ls~n~l~--~~~~~ 385 (693)
+..+|...+ .+++|+.|++++|+|+++.... ....+|++|+||+|+++.+|.. ..++.|+.|++.+|+++ |+ |.
T Consensus 234 Lp~vPecly-~l~~LrrLNLS~N~iteL~~~~-~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~NkL~FeGi-PS 310 (1255)
T KOG0444|consen 234 LPIVPECLY-KLRNLRRLNLSGNKITELNMTE-GEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYANNNKLTFEGI-PS 310 (1255)
T ss_pred CCcchHHHh-hhhhhheeccCcCceeeeeccH-HHHhhhhhhccccchhccchHHHhhhHHHHHHHhccCcccccCC-cc
Confidence 555555543 4555666666666655544332 3345555566666666555554 55555555555555543 22 23
Q ss_pred ccCCCCCCcEEECCCCcCcccccccCCCCccCCCCCcEEECCCCCCCcCChhHHhcCCCCcEEECCCCC
Q psy8029 386 AFDGLSSLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLFDDWISSMTSLKELDLRHNN 454 (693)
Q Consensus 386 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 454 (693)
.++.+..|+.+..++|.+.-. +..+..|..|+.|.|+.|++..+ |+.+.-++.|+.||++.|.
T Consensus 311 GIGKL~~Levf~aanN~LElV-----PEglcRC~kL~kL~L~~NrLiTL-PeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 311 GIGKLIQLEVFHAANNKLELV-----PEGLCRCVKLQKLKLDHNRLITL-PEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred chhhhhhhHHHHhhccccccC-----chhhhhhHHHHHhcccccceeec-hhhhhhcCCcceeeccCCc
Confidence 445555555555555555432 44455555555555555555443 2334555555555555554
No 11
>KOG0444|consensus
Probab=99.96 E-value=1.6e-31 Score=272.08 Aligned_cols=383 Identities=24% Similarity=0.357 Sum_probs=325.5
Q ss_pred CCCccEEEEEcCCCCCccHHHHhhhcCcccccEEEeecCCCCccCCCCccCCCcccccEEEccCCcCcccccccccCCCC
Q psy8029 47 LGPFNAVTFTFCPLPDENFISLFSKLNITTINTLAFSNSPSNVGVLSPPYFDGLHFVKHILLSHNKEITGLHKDIFKGTP 126 (693)
Q Consensus 47 ~~~l~~L~l~~c~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~l~~~~~~~l~~L~~L~Ls~n~~i~~~~~~~~~~l~ 126 (693)
.|-|+-++|+++......++.-.+ .++.++-|.+... .+..++ ..++.+.+|++|.+++| ++..+... ++.++
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~--qMt~~~WLkLnrt--~L~~vP-eEL~~lqkLEHLs~~HN-~L~~vhGE-Ls~Lp 78 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVE--QMTQMTWLKLNRT--KLEQVP-EELSRLQKLEHLSMAHN-QLISVHGE-LSDLP 78 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHH--HhhheeEEEechh--hhhhCh-HHHHHHhhhhhhhhhhh-hhHhhhhh-hccch
Confidence 466888999999988776665433 5677888888887 888888 68999999999999999 88887754 78899
Q ss_pred CCcEEEeeCCcccc--cCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCCCCCCcEEE
Q psy8029 127 QLESLNLRGNSITE--LYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNVPNLRSLD 204 (693)
Q Consensus 127 ~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 204 (693)
.|+.+++..|++.. ||+++| .+..|.+||||+|++..++.. +..-+++-.|+||+|+|..|+...|-+++.|-.||
T Consensus 79 ~LRsv~~R~N~LKnsGiP~diF-~l~dLt~lDLShNqL~EvP~~-LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLD 156 (1255)
T KOG0444|consen 79 RLRSVIVRDNNLKNSGIPTDIF-RLKDLTILDLSHNQLREVPTN-LEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLD 156 (1255)
T ss_pred hhHHHhhhccccccCCCCchhc-ccccceeeecchhhhhhcchh-hhhhcCcEEEEcccCccccCCchHHHhhHhHhhhc
Confidence 99999999998864 888876 699999999999999998765 68889999999999999999999999999999999
Q ss_pred CcCCCCCcCCCCcCCCCCCCcEEEcCCCccccCChhhhhcccCceEEEEecCCCcccccCccccCCCCCccEEEcCCCCC
Q psy8029 205 ISGNNISILPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEMKYLQVIKISYHKDSLKELPSGLFANLPLLNTVILGESSI 284 (693)
Q Consensus 205 L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~i~~~~~~~l~~L~~L~l~~n~l 284 (693)
|++|++..+|+. ...+..|++|.|++|.+..+....+..+++|++|.+++.+-....+|.. +..+.+|..++++.|.+
T Consensus 157 LS~NrLe~LPPQ-~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Pts-ld~l~NL~dvDlS~N~L 234 (1255)
T KOG0444|consen 157 LSNNRLEMLPPQ-IRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTS-LDDLHNLRDVDLSENNL 234 (1255)
T ss_pred cccchhhhcCHH-HHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCc-hhhhhhhhhccccccCC
Confidence 999999999987 4778999999999999886555556678899999999988777778876 68899999999999999
Q ss_pred cccCcccccCCCCccEEEecCCCCCCcCChhhhcCCCCCcEEEccCCCCCCCChhhhccCccCceEeccCCcCc--cccC
Q psy8029 285 AELPSDLFWNSTNITNIVLTGHKKLTSLPSTLFRDCKKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLE--NITS 362 (693)
Q Consensus 285 ~~~~~~~~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~--~l~~ 362 (693)
..+|... ..+.+|+.|++++| .++.+.... ....+|++|+++.|+++.+|... ..+++|+.|.+.+|+++ ++|.
T Consensus 235 p~vPecl-y~l~~LrrLNLS~N-~iteL~~~~-~~W~~lEtLNlSrNQLt~LP~av-cKL~kL~kLy~n~NkL~FeGiPS 310 (1255)
T KOG0444|consen 235 PIVPECL-YKLRNLRRLNLSGN-KITELNMTE-GEWENLETLNLSRNQLTVLPDAV-CKLTKLTKLYANNNKLTFEGIPS 310 (1255)
T ss_pred CcchHHH-hhhhhhheeccCcC-ceeeeeccH-HHHhhhhhhccccchhccchHHH-hhhHHHHHHHhccCcccccCCcc
Confidence 9998655 57899999999999 998887553 55688999999999999999864 78999999999999976 4888
Q ss_pred c-cCCCCCCeEeCCCCccccccccccCCCCCCcEEECCCCcCcccccccCCCCccCCCCCcEEECCCCCCCcCChhHHhc
Q psy8029 363 L-VGLSGLNSLDLSWNQLEQINLIAFDGLSSLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLFDDWISS 441 (693)
Q Consensus 363 ~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 441 (693)
. ..+..|+.+..++|.+.-+ |..+..|..|+.|.|+.|++... +.++.-++.|+.||+..|.--..+|.--..
T Consensus 311 GIGKL~~Levf~aanN~LElV-PEglcRC~kL~kL~L~~NrLiTL-----PeaIHlL~~l~vLDlreNpnLVMPPKP~da 384 (1255)
T KOG0444|consen 311 GIGKLIQLEVFHAANNKLELV-PEGLCRCVKLQKLKLDHNRLITL-----PEAIHLLPDLKVLDLRENPNLVMPPKPNDA 384 (1255)
T ss_pred chhhhhhhHHHHhhccccccC-chhhhhhHHHHHhcccccceeec-----hhhhhhcCCcceeeccCCcCccCCCCcchh
Confidence 8 8899999999999988655 55788999999999999998765 788888999999999999766666542222
Q ss_pred CCCCcEEEC
Q psy8029 442 MTSLKELDL 450 (693)
Q Consensus 442 l~~L~~L~L 450 (693)
-++|+.-++
T Consensus 385 ~~~lefYNI 393 (1255)
T KOG0444|consen 385 RKKLEFYNI 393 (1255)
T ss_pred hhcceeeec
Confidence 245555444
No 12
>KOG4237|consensus
Probab=99.96 E-value=3.8e-31 Score=256.52 Aligned_cols=311 Identities=23% Similarity=0.326 Sum_probs=244.3
Q ss_pred cHHHHhhhcCcccccEEEeecCCCCccCCCCccCCCcccccEEEccCCcCcccccccccCCCCCCcEEEeeC-CcccccC
Q psy8029 64 NFISLFSKLNITTINTLAFSNSPSNVGVLSPPYFDGLHFVKHILLSHNKEITGLHKDIFKGTPQLESLNLRG-NSITELY 142 (693)
Q Consensus 64 ~~~~~~~~~~~~~L~~L~l~~~~~~i~~l~~~~~~~l~~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~-n~i~~~~ 142 (693)
++.+++..+. .....++|..| .|+.|++.+|+.+++||+||||+| +|+.|.+++|.++++|.+|-+.+ |+|+.++
T Consensus 57 GL~eVP~~LP-~~tveirLdqN--~I~~iP~~aF~~l~~LRrLdLS~N-~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~ 132 (498)
T KOG4237|consen 57 GLTEVPANLP-PETVEIRLDQN--QISSIPPGAFKTLHRLRRLDLSKN-NISFIAPDAFKGLASLLSLVLYGNNKITDLP 132 (498)
T ss_pred CcccCcccCC-CcceEEEeccC--CcccCChhhccchhhhceeccccc-chhhcChHhhhhhHhhhHHHhhcCCchhhhh
Confidence 3445544333 23568899998 999999999999999999999999 99999999999999988888777 9999999
Q ss_pred cccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCCCCCCcEEECcCCCCCc----------
Q psy8029 143 SGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNVPNLRSLDISGNNISI---------- 212 (693)
Q Consensus 143 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~---------- 212 (693)
.++|+++..|+.|.+.-|++.-+..++|..+++|..|.+++|.+..+....|..+..++.+.+..|.+..
T Consensus 133 k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~ 212 (498)
T KOG4237|consen 133 KGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADD 212 (498)
T ss_pred hhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhH
Confidence 9999999999999999999999999999999999999999999999998899999999999999887321
Q ss_pred --CCCCcCCCCCCCcEEEcCCCccccCChhhhhcccCceEE--EEecCCCcccccCccccCCCCCccEEEcCCCCCcccC
Q psy8029 213 --LPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEMKYLQVI--KISYHKDSLKELPSGLFANLPLLNTVILGESSIAELP 288 (693)
Q Consensus 213 --~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L--~l~~n~~~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~ 288 (693)
..+..+++........+.+.++..+....|... ++.+ .+....+.....|...|..+++|+++++++|+++.|.
T Consensus 213 ~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~--~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~ 290 (498)
T KOG4237|consen 213 LAMNPIETSGARCVSPYRLYYKRINQEDARKFLCS--LESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIE 290 (498)
T ss_pred HhhchhhcccceecchHHHHHHHhcccchhhhhhh--HHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhh
Confidence 112224444444444555556666666555322 3322 1222222244556667889999999999999999999
Q ss_pred cccccCCCCccEEEecCCCCCCcCChhhhcCCCCCcEEEccCCCCCCCChhhhccCccCceEeccCCcCcc---------
Q psy8029 289 SDLFWNSTNITNIVLTGHKKLTSLPSTLFRDCKKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLEN--------- 359 (693)
Q Consensus 289 ~~~~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~--------- 359 (693)
+.+|.+...++.|.+..| ++..+...+|.++..|+.|++.+|+|+.+.+.+|.....|.+|++-.|.+.-
T Consensus 291 ~~aFe~~a~l~eL~L~~N-~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~ 369 (498)
T KOG4237|consen 291 DGAFEGAAELQELYLTRN-KLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGE 369 (498)
T ss_pred hhhhcchhhhhhhhcCcc-hHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHH
Confidence 999999999999999999 9999999999999999999999999998888889999999999988776431
Q ss_pred ---------ccCccCCCCCCeEeCCCCcccc
Q psy8029 360 ---------ITSLVGLSGLNSLDLSWNQLEQ 381 (693)
Q Consensus 360 ---------l~~~~~l~~L~~L~Ls~n~l~~ 381 (693)
.|..+....++.+.+++..+..
T Consensus 370 Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~ 400 (498)
T KOG4237|consen 370 WLRKKSVVGNPRCQSPGFVRQIPISDVAFGD 400 (498)
T ss_pred HHhhCCCCCCCCCCCCchhccccchhccccc
Confidence 2222444556666666655543
No 13
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.86 E-value=2.6e-20 Score=222.24 Aligned_cols=337 Identities=20% Similarity=0.253 Sum_probs=200.1
Q ss_pred CCCCccCCCcccccEEEccCCcCcc------c-ccccccCCC-CCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCC
Q psy8029 91 VLSPPYFDGLHFVKHILLSHNKEIT------G-LHKDIFKGT-PQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDV 162 (693)
Q Consensus 91 ~l~~~~~~~l~~L~~L~Ls~n~~i~------~-~~~~~~~~l-~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 162 (693)
.+...+|.+|++|+.|.+..+ ... . ++. .|..+ ++|+.|.+.++.++.+|.. | ...+|++|+++++.+
T Consensus 548 ~i~~~aF~~m~~L~~L~~~~~-~~~~~~~~~~~lp~-~~~~lp~~Lr~L~~~~~~l~~lP~~-f-~~~~L~~L~L~~s~l 623 (1153)
T PLN03210 548 HIHENAFKGMRNLLFLKFYTK-KWDQKKEVRWHLPE-GFDYLPPKLRLLRWDKYPLRCMPSN-F-RPENLVKLQMQGSKL 623 (1153)
T ss_pred eecHHHHhcCccccEEEEecc-cccccccceeecCc-chhhcCcccEEEEecCCCCCCCCCc-C-CccCCcEEECcCccc
Confidence 455567888888888888655 321 1 222 24444 3588888888877777765 3 467888888888877
Q ss_pred CccChhhhCCCCCCCEEEccCCC-CCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCCC-ccccCChh
Q psy8029 163 AYMDPEIFKNLTSLRILNLDHNQ-LINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFYANSN-RFQMFPKD 240 (693)
Q Consensus 163 ~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~ 240 (693)
..++.. +..+++|+.|+|+++. +..++. ++.+++|++|++++|......+..+..+++|+.|++++| .+..+|..
T Consensus 624 ~~L~~~-~~~l~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~ 700 (1153)
T PLN03210 624 EKLWDG-VHSLTGLRNIDLRGSKNLKEIPD--LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTG 700 (1153)
T ss_pred cccccc-cccCCCCCEEECCCCCCcCcCCc--cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCc
Confidence 766543 5677888888887764 444432 667788888888776533323334677778888888775 35566654
Q ss_pred hhhcccCceEEEEecCCCcccccCccccCCCCCccEEEcCCCCCcccCcccccCCCCccEEEecCCC------CCCcCCh
Q psy8029 241 LFAEMKYLQVIKISYHKDSLKELPSGLFANLPLLNTVILGESSIAELPSDLFWNSTNITNIVLTGHK------KLTSLPS 314 (693)
Q Consensus 241 ~~~~~~~L~~L~l~~n~~~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~------~l~~l~~ 314 (693)
. ++++|+.|++++|.. ...+|. ...+|+.|++++|.+..+|... .+++|+.|.+.++. .+..+++
T Consensus 701 i--~l~sL~~L~Lsgc~~-L~~~p~----~~~nL~~L~L~~n~i~~lP~~~--~l~~L~~L~l~~~~~~~l~~~~~~l~~ 771 (1153)
T PLN03210 701 I--NLKSLYRLNLSGCSR-LKSFPD----ISTNISWLDLDETAIEEFPSNL--RLENLDELILCEMKSEKLWERVQPLTP 771 (1153)
T ss_pred C--CCCCCCEEeCCCCCC-cccccc----ccCCcCeeecCCCccccccccc--cccccccccccccchhhccccccccch
Confidence 2 567777777777752 223332 2346777777777777766543 45666666666541 1111222
Q ss_pred hhhcCCCCCcEEEccCCC-CCCCChhhhccCccCceEeccCC-cCccccCccCCCCCCeEeCCCCccccccccccCCCCC
Q psy8029 315 TLFRDCKKLVKLELQRNK-LKYLPENLFESLKELYTLNLKNN-QLENITSLVGLSGLNSLDLSWNQLEQINLIAFDGLSS 392 (693)
Q Consensus 315 ~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~L~Ls~n-~l~~l~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 392 (693)
..+..+++|++|++++|. +..+|.. +..+++|+.|++++| .+..+|....+++|+.|++++|..-...+. ...+
T Consensus 772 ~~~~~~~sL~~L~Ls~n~~l~~lP~s-i~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~~L~~~p~---~~~n 847 (1153)
T PLN03210 772 LMTMLSPSLTRLFLSDIPSLVELPSS-IQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRLRTFPD---ISTN 847 (1153)
T ss_pred hhhhccccchheeCCCCCCccccChh-hhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCCccccccc---cccc
Confidence 222334567777777663 3345543 566777777777665 355565555566666666666543222221 1245
Q ss_pred CcEEECCCCcCcccccccCCCCccCCCCCcEEECCCC-CCCcCChhHHhcCCCCcEEECCCC
Q psy8029 393 LNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYN-RISSLFDDWISSMTSLKELDLRHN 453 (693)
Q Consensus 393 L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n-~l~~~~~~~~~~l~~L~~L~L~~N 453 (693)
|+.|++++|.++.. +..+..+++|+.|++++| .+..++. .+..+++|+.+++++|
T Consensus 848 L~~L~Ls~n~i~~i-----P~si~~l~~L~~L~L~~C~~L~~l~~-~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 848 ISDLNLSRTGIEEV-----PWWIEKFSNLSFLDMNGCNNLQRVSL-NISKLKHLETVDFSDC 903 (1153)
T ss_pred cCEeECCCCCCccC-----hHHHhcCCCCCEEECCCCCCcCccCc-ccccccCCCeeecCCC
Confidence 66666666666533 344555666666666664 4444333 2455566666666655
No 14
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.86 E-value=6.1e-21 Score=211.22 Aligned_cols=261 Identities=27% Similarity=0.315 Sum_probs=149.5
Q ss_pred CcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCC
Q psy8029 152 LQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFYANS 231 (693)
Q Consensus 152 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 231 (693)
-..|+++.+.++.+++.. . .+|+.|++++|+++.++. ..++|++|++++|+++.++.. .++|+.|++++
T Consensus 203 ~~~LdLs~~~LtsLP~~l-~--~~L~~L~L~~N~Lt~LP~----lp~~Lk~LdLs~N~LtsLP~l----p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLTTLPDCL-P--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTSLPVL----PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCCcCCcch-h--cCCCEEEccCCcCCCCCC----CCCCCcEEEecCCccCcccCc----ccccceeeccC
Confidence 344555555555544322 1 245555555555555432 135555555655555555431 24555666666
Q ss_pred CccccCChhhhhcccCceEEEEecCCCcccccCccccCCCCCccEEEcCCCCCcccCcccccCCCCccEEEecCCCCCCc
Q psy8029 232 NRFQMFPKDLFAEMKYLQVIKISYHKDSLKELPSGLFANLPLLNTVILGESSIAELPSDLFWNSTNITNIVLTGHKKLTS 311 (693)
Q Consensus 232 n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~l~~ 311 (693)
|.++.++.. ...|+.|++++|+ +..+|.. .++|+.|++++|.+..+|.. ..+|+.|++++| .++.
T Consensus 272 N~L~~Lp~l----p~~L~~L~Ls~N~--Lt~LP~~----p~~L~~LdLS~N~L~~Lp~l----p~~L~~L~Ls~N-~L~~ 336 (788)
T PRK15387 272 NPLTHLPAL----PSGLCKLWIFGNQ--LTSLPVL----PPGLQELSVSDNQLASLPAL----PSELCKLWAYNN-QLTS 336 (788)
T ss_pred Cchhhhhhc----hhhcCEEECcCCc--ccccccc----ccccceeECCCCccccCCCC----cccccccccccC-cccc
Confidence 655554431 2445556666665 3344431 34566666666666665531 234566666666 6666
Q ss_pred CChhhhcCCCCCcEEEccCCCCCCCChhhhccCccCceEeccCCcCccccCccCCCCCCeEeCCCCccccccccccCCCC
Q psy8029 312 LPSTLFRDCKKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLENITSLVGLSGLNSLDLSWNQLEQINLIAFDGLS 391 (693)
Q Consensus 312 l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~l~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 391 (693)
+|.. ..+|++|++++|+++.+|.. ..+|+.|++++|+++.+|.. ..+|+.|++++|.+++++.. .+
T Consensus 337 LP~l----p~~Lq~LdLS~N~Ls~LP~l----p~~L~~L~Ls~N~L~~LP~l--~~~L~~LdLs~N~Lt~LP~l----~s 402 (788)
T PRK15387 337 LPTL----PSGLQELSVSDNQLASLPTL----PSELYKLWAYNNRLTSLPAL--PSGLKELIVSGNRLTSLPVL----PS 402 (788)
T ss_pred cccc----ccccceEecCCCccCCCCCC----CcccceehhhccccccCccc--ccccceEEecCCcccCCCCc----cc
Confidence 6531 24677777777777766642 34566677777777766643 34677777777777765431 24
Q ss_pred CCcEEECCCCcCcccccccCCCCccCCCCCcEEECCCCCCCcCChhHHhcCCCCcEEECCCCCCccCCCc
Q psy8029 392 SLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLFDDWISSMTSLKELDLRHNNFSFIPDQ 461 (693)
Q Consensus 392 ~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 461 (693)
+|+.|++++|.++.. +. ...+|+.|++++|+++.++ ..+..+++|+.|+|++|+|++..+.
T Consensus 403 ~L~~LdLS~N~LssI-----P~---l~~~L~~L~Ls~NqLt~LP-~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 403 ELKELMVSGNRLTSL-----PM---LPSGLLSLSVYRNQLTRLP-ESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred CCCEEEccCCcCCCC-----Cc---chhhhhhhhhccCcccccC-hHHhhccCCCeEECCCCCCCchHHH
Confidence 677777777777643 11 1245677777777777654 3466777777777777777765444
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.86 E-value=6.2e-21 Score=211.12 Aligned_cols=257 Identities=26% Similarity=0.285 Sum_probs=138.3
Q ss_pred cccEEEccCCcCcccccccccCCCCCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEc
Q psy8029 102 FVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNL 181 (693)
Q Consensus 102 ~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 181 (693)
.-..|+++.+ +++.+|+... ++|+.|++.+|+++.+|.. .++|++|++++|.++.++. ..++|+.|++
T Consensus 202 ~~~~LdLs~~-~LtsLP~~l~---~~L~~L~L~~N~Lt~LP~l----p~~Lk~LdLs~N~LtsLP~----lp~sL~~L~L 269 (788)
T PRK15387 202 GNAVLNVGES-GLTTLPDCLP---AHITTLVIPDNNLTSLPAL----PPELRTLEVSGNQLTSLPV----LPPGLLELSI 269 (788)
T ss_pred CCcEEEcCCC-CCCcCCcchh---cCCCEEEccCCcCCCCCCC----CCCCcEEEecCCccCcccC----cccccceeec
Confidence 4556777777 7777776432 3677777777777776642 4677777777777776643 1356777777
Q ss_pred cCCCCCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCCCccccCChhhhhcccCceEEEEecCCCccc
Q psy8029 182 DHNQLINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEMKYLQVIKISYHKDSLK 261 (693)
Q Consensus 182 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~ 261 (693)
++|.++.++. ...+|+.|++++|+++.++. ..++|+.|++++|.++.++.. ...|+.|++++|. +.
T Consensus 270 s~N~L~~Lp~----lp~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L~~Lp~l----p~~L~~L~Ls~N~--L~ 335 (788)
T PRK15387 270 FSNPLTHLPA----LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPAL----PSELCKLWAYNNQ--LT 335 (788)
T ss_pred cCCchhhhhh----chhhcCEEECcCCccccccc----cccccceeECCCCccccCCCC----cccccccccccCc--cc
Confidence 7777765543 12456677777777776654 135677777777776665531 2345566666665 33
Q ss_pred ccCccccCCCCCccEEEcCCCCCcccCcccccCCCCccEEEecCCCCCCcCChhhhcCCCCCcEEEccCCCCCCCChhhh
Q psy8029 262 ELPSGLFANLPLLNTVILGESSIAELPSDLFWNSTNITNIVLTGHKKLTSLPSTLFRDCKKLVKLELQRNKLKYLPENLF 341 (693)
Q Consensus 262 ~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 341 (693)
.+|.. ..+|+.|++++|+++.+|.. ..+|+.|++++| .+..+|.. ..+|+.|++++|.++.+|..
T Consensus 336 ~LP~l----p~~Lq~LdLS~N~Ls~LP~l----p~~L~~L~Ls~N-~L~~LP~l----~~~L~~LdLs~N~Lt~LP~l-- 400 (788)
T PRK15387 336 SLPTL----PSGLQELSVSDNQLASLPTL----PSELYKLWAYNN-RLTSLPAL----PSGLKELIVSGNRLTSLPVL-- 400 (788)
T ss_pred ccccc----ccccceEecCCCccCCCCCC----Ccccceehhhcc-ccccCccc----ccccceEEecCCcccCCCCc--
Confidence 44431 13455566666555555431 234455555555 44444431 23455555555555444431
Q ss_pred ccCccCceEeccCCcCccccCccCCCCCCeEeCCCCccccccccccCCCCCCcEEECCCCcCc
Q psy8029 342 ESLKELYTLNLKNNQLENITSLVGLSGLNSLDLSWNQLEQINLIAFDGLSSLNTVDLSHNLLT 404 (693)
Q Consensus 342 ~~~~~L~~L~Ls~n~l~~l~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 404 (693)
.++|+.|++++|+++.+|.. +.+|+.|++++|+++.++ ..+..++.|+.|++++|+++
T Consensus 401 --~s~L~~LdLS~N~LssIP~l--~~~L~~L~Ls~NqLt~LP-~sl~~L~~L~~LdLs~N~Ls 458 (788)
T PRK15387 401 --PSELKELMVSGNRLTSLPML--PSGLLSLSVYRNQLTRLP-ESLIHLSSETTVNLEGNPLS 458 (788)
T ss_pred --ccCCCEEEccCCcCCCCCcc--hhhhhhhhhccCcccccC-hHHhhccCCCeEECCCCCCC
Confidence 23444444444444444432 223444444444444332 23333444444444444443
No 16
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.86 E-value=1.2e-19 Score=216.63 Aligned_cols=334 Identities=25% Similarity=0.329 Sum_probs=253.1
Q ss_pred ccccccCCCCCCcEEEeeCCccc-------ccCcccCCCC-CCCcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCC
Q psy8029 117 LHKDIFKGTPQLESLNLRGNSIT-------ELYSGVFQYV-PKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLIN 188 (693)
Q Consensus 117 ~~~~~~~~l~~L~~L~L~~n~i~-------~~~~~~~~~l-~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 188 (693)
+...+|.++++|+.|.+..+... .+|.+ |..+ .+|+.|.+.++.+..++.. | ...+|++|++.++++..
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~-~~~lp~~Lr~L~~~~~~l~~lP~~-f-~~~~L~~L~L~~s~l~~ 625 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEG-FDYLPPKLRLLRWDKYPLRCMPSN-F-RPENLVKLQMQGSKLEK 625 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcc-hhhcCcccEEEEecCCCCCCCCCc-C-CccCCcEEECcCccccc
Confidence 56677999999999999766422 24444 4444 5799999999998888765 3 56899999999999987
Q ss_pred CChhhcCCCCCCcEEECcCCC-CCcCCCCcCCCCCCCcEEEcCCCc-cccCChhhhhcccCceEEEEecCCCcccccCcc
Q psy8029 189 LTRAIFNNVPNLRSLDISGNN-ISILPSGVFSDLRKLQTFYANSNR-FQMFPKDLFAEMKYLQVIKISYHKDSLKELPSG 266 (693)
Q Consensus 189 ~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~L~l~~n~~~~~~i~~~ 266 (693)
+... +..+++|+.|+|+++. +..++. +..+++|+.|++++|. +..+|.. +..+++|+.|++++|.. +..+|..
T Consensus 626 L~~~-~~~l~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~L~L~~c~~L~~lp~s-i~~L~~L~~L~L~~c~~-L~~Lp~~ 700 (1153)
T PLN03210 626 LWDG-VHSLTGLRNIDLRGSKNLKEIPD--LSMATNLETLKLSDCSSLVELPSS-IQYLNKLEDLDMSRCEN-LEILPTG 700 (1153)
T ss_pred cccc-cccCCCCCEEECCCCCCcCcCCc--cccCCcccEEEecCCCCccccchh-hhccCCCCEEeCCCCCC-cCccCCc
Confidence 7554 5789999999999875 556654 7789999999999976 4456554 78899999999998753 4577765
Q ss_pred ccCCCCCccEEEcCCCC-CcccCcccccCCCCccEEEecCCCCCCcCChhhhcCCCCCcEEEccCCCCC-------CCCh
Q psy8029 267 LFANLPLLNTVILGESS-IAELPSDLFWNSTNITNIVLTGHKKLTSLPSTLFRDCKKLVKLELQRNKLK-------YLPE 338 (693)
Q Consensus 267 ~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n~l~-------~~~~ 338 (693)
. ++++|+.|++++|. +..+|. ...+|+.|++++| .++.+|... .+++|++|++.++... .++.
T Consensus 701 i--~l~sL~~L~Lsgc~~L~~~p~----~~~nL~~L~L~~n-~i~~lP~~~--~l~~L~~L~l~~~~~~~l~~~~~~l~~ 771 (1153)
T PLN03210 701 I--NLKSLYRLNLSGCSRLKSFPD----ISTNISWLDLDET-AIEEFPSNL--RLENLDELILCEMKSEKLWERVQPLTP 771 (1153)
T ss_pred C--CCCCCCEEeCCCCCCcccccc----ccCCcCeeecCCC-ccccccccc--cccccccccccccchhhccccccccch
Confidence 3 78899999999985 344442 2468999999999 788888753 6788999998875432 2222
Q ss_pred hhhccCccCceEeccCCcC-ccccCc-cCCCCCCeEeCCCCc-cccccccccCCCCCCcEEECCCCcCcccccccCCCCc
Q psy8029 339 NLFESLKELYTLNLKNNQL-ENITSL-VGLSGLNSLDLSWNQ-LEQINLIAFDGLSSLNTVDLSHNLLTFDEYQYGYSPL 415 (693)
Q Consensus 339 ~~~~~~~~L~~L~Ls~n~l-~~l~~~-~~l~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 415 (693)
..+..+++|+.|++++|.. ..+|.. ..+++|+.|++++|. +..++ ... ++++|+.|++++|..... .+
T Consensus 772 ~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP-~~~-~L~sL~~L~Ls~c~~L~~----~p--- 842 (1153)
T PLN03210 772 LMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLP-TGI-NLESLESLDLSGCSRLRT----FP--- 842 (1153)
T ss_pred hhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeC-CCC-CccccCEEECCCCCcccc----cc---
Confidence 2344567899999999864 447765 889999999999975 44443 333 689999999999754321 11
Q ss_pred cCCCCCcEEECCCCCCCcCChhHHhcCCCCcEEECCC-CCCccCCCcccccCCCccEEECCCCC
Q psy8029 416 KQCVNLETINLSYNRISSLFDDWISSMTSLKELDLRH-NNFSFIPDQLDSIVSNKLTLDLSFNQ 478 (693)
Q Consensus 416 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~ 478 (693)
...++|+.|+|++|.++.++ .++..+++|+.|++++ +++..++.. ...++.|+.+++++|.
T Consensus 843 ~~~~nL~~L~Ls~n~i~~iP-~si~~l~~L~~L~L~~C~~L~~l~~~-~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 843 DISTNISDLNLSRTGIEEVP-WWIEKFSNLSFLDMNGCNNLQRVSLN-ISKLKHLETVDFSDCG 904 (1153)
T ss_pred ccccccCEeECCCCCCccCh-HHHhcCCCCCEEECCCCCCcCccCcc-cccccCCCeeecCCCc
Confidence 22468999999999999864 5689999999999998 567776654 5678889999998883
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.79 E-value=9.5e-19 Score=195.28 Aligned_cols=245 Identities=23% Similarity=0.349 Sum_probs=167.1
Q ss_pred cccEEEccCCcCcccccccccCCCCCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEc
Q psy8029 102 FVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNL 181 (693)
Q Consensus 102 ~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 181 (693)
+.+.|+++++ +++.+|... .+.|+.|++++|.++.+|...+ .+|++|++++|.++.++... ..+|+.|++
T Consensus 179 ~~~~L~L~~~-~LtsLP~~I---p~~L~~L~Ls~N~LtsLP~~l~---~nL~~L~Ls~N~LtsLP~~l---~~~L~~L~L 248 (754)
T PRK15370 179 NKTELRLKIL-GLTTIPACI---PEQITTLILDNNELKSLPENLQ---GNIKTLYANSNQLTSIPATL---PDTIQEMEL 248 (754)
T ss_pred CceEEEeCCC-CcCcCCccc---ccCCcEEEecCCCCCcCChhhc---cCCCEEECCCCccccCChhh---hccccEEEC
Confidence 4567888877 777777543 2467888888888877776543 47888888888877775432 246788888
Q ss_pred cCCCCCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCCCccccCChhhhhcccCceEEEEecCCCccc
Q psy8029 182 DHNQLINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEMKYLQVIKISYHKDSLK 261 (693)
Q Consensus 182 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~ 261 (693)
++|++..++... . .+|+.|++++|+++.++... .++|+.|++++|.++.++... .++|+.|++++|. +.
T Consensus 249 s~N~L~~LP~~l-~--s~L~~L~Ls~N~L~~LP~~l---~~sL~~L~Ls~N~Lt~LP~~l---p~sL~~L~Ls~N~--Lt 317 (754)
T PRK15370 249 SINRITELPERL-P--SALQSLDLFHNKISCLPENL---PEELRYLSVYDNSIRTLPAHL---PSGITHLNVQSNS--LT 317 (754)
T ss_pred cCCccCcCChhH-h--CCCCEEECcCCccCcccccc---CCCCcEEECCCCccccCcccc---hhhHHHHHhcCCc--cc
Confidence 888887765542 2 46788888888888776543 247888888888887776542 2467777777777 44
Q ss_pred ccCccccCCCCCccEEEcCCCCCcccCcccccCCCCccEEEecCCCCCCcCChhhhcCCCCCcEEEccCCCCCCCChhhh
Q psy8029 262 ELPSGLFANLPLLNTVILGESSIAELPSDLFWNSTNITNIVLTGHKKLTSLPSTLFRDCKKLVKLELQRNKLKYLPENLF 341 (693)
Q Consensus 262 ~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 341 (693)
.+|... .++|+.|++++|.++.+|..+ .++|+.|++++| .+..+|..+ .++|++|++++|.++.+|....
T Consensus 318 ~LP~~l---~~sL~~L~Ls~N~Lt~LP~~l---~~sL~~L~Ls~N-~L~~LP~~l---p~~L~~LdLs~N~Lt~LP~~l~ 387 (754)
T PRK15370 318 ALPETL---PPGLKTLEAGENALTSLPASL---PPELQVLDVSKN-QITVLPETL---PPTITTLDVSRNALTNLPENLP 387 (754)
T ss_pred cCCccc---cccceeccccCCccccCChhh---cCcccEEECCCC-CCCcCChhh---cCCcCEEECCCCcCCCCCHhHH
Confidence 555432 256777788887777776543 257778888877 677777643 3577888888888777776542
Q ss_pred ccCccCceEeccCCcCccccCc-----cCCCCCCeEeCCCCccc
Q psy8029 342 ESLKELYTLNLKNNQLENITSL-----VGLSGLNSLDLSWNQLE 380 (693)
Q Consensus 342 ~~~~~L~~L~Ls~n~l~~l~~~-----~~l~~L~~L~Ls~n~l~ 380 (693)
..|+.|++++|+++.+|.. ...+.+..|++.+|.++
T Consensus 388 ---~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 388 ---AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred ---HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 3577777777777776643 33456667777777665
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.77 E-value=2.8e-18 Score=191.52 Aligned_cols=248 Identities=26% Similarity=0.343 Sum_probs=129.4
Q ss_pred CCCCEEEccCCCCCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCCCccccCChhhhhcccCceEEEE
Q psy8029 174 TSLRILNLDHNQLINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEMKYLQVIKI 253 (693)
Q Consensus 174 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l 253 (693)
.+...|++++++++.++... .+.|+.|++++|.++.++...+ ++|+.|++++|.++.+|... ...|+.|++
T Consensus 178 ~~~~~L~L~~~~LtsLP~~I---p~~L~~L~Ls~N~LtsLP~~l~---~nL~~L~Ls~N~LtsLP~~l---~~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLTTIPACI---PEQITTLILDNNELKSLPENLQ---GNIKTLYANSNQLTSIPATL---PDTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcCcCCccc---ccCCcEEEecCCCCCcCChhhc---cCCCEEECCCCccccCChhh---hccccEEEC
Confidence 34567777777776665432 2456777777777776665432 46777777777776666542 235666666
Q ss_pred ecCCCcccccCccccCCCCCccEEEcCCCCCcccCcccccCCCCccEEEecCCCCCCcCChhhhcCCCCCcEEEccCCCC
Q psy8029 254 SYHKDSLKELPSGLFANLPLLNTVILGESSIAELPSDLFWNSTNITNIVLTGHKKLTSLPSTLFRDCKKLVKLELQRNKL 333 (693)
Q Consensus 254 ~~n~~~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n~l 333 (693)
++|. +..+|.... .+|+.|++++|+++.+|..+. .+|+.|++++| .++.+|..+ .++|+.|++++|.+
T Consensus 249 s~N~--L~~LP~~l~---s~L~~L~Ls~N~L~~LP~~l~---~sL~~L~Ls~N-~Lt~LP~~l---p~sL~~L~Ls~N~L 316 (754)
T PRK15370 249 SINR--ITELPERLP---SALQSLDLFHNKISCLPENLP---EELRYLSVYDN-SIRTLPAHL---PSGITHLNVQSNSL 316 (754)
T ss_pred cCCc--cCcCChhHh---CCCCEEECcCCccCccccccC---CCCcEEECCCC-ccccCcccc---hhhHHHHHhcCCcc
Confidence 6666 445555422 356666666666665554332 35666666665 555555432 13455566666655
Q ss_pred CCCChhhhccCccCceEeccCCcCccccCccCCCCCCeEeCCCCccccccccccCCCCCCcEEECCCCcCcccccccCCC
Q psy8029 334 KYLPENLFESLKELYTLNLKNNQLENITSLVGLSGLNSLDLSWNQLEQINLIAFDGLSSLNTVDLSHNLLTFDEYQYGYS 413 (693)
Q Consensus 334 ~~~~~~~~~~~~~L~~L~Ls~n~l~~l~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 413 (693)
+.+|... .++|+.|++++|.++.+|.. -+++|+.|++++|+++.++. .+ .++|+.|++++|.++.. +.
T Consensus 317 t~LP~~l---~~sL~~L~Ls~N~Lt~LP~~-l~~sL~~L~Ls~N~L~~LP~-~l--p~~L~~LdLs~N~Lt~L-----P~ 384 (754)
T PRK15370 317 TALPETL---PPGLKTLEAGENALTSLPAS-LPPELQVLDVSKNQITVLPE-TL--PPTITTLDVSRNALTNL-----PE 384 (754)
T ss_pred ccCCccc---cccceeccccCCccccCChh-hcCcccEEECCCCCCCcCCh-hh--cCCcCEEECCCCcCCCC-----CH
Confidence 5555432 24555555555555555432 12455555555555554322 12 13455555555555432 11
Q ss_pred CccCCCCCcEEECCCCCCCcCCh---hHHhcCCCCcEEECCCCCCc
Q psy8029 414 PLKQCVNLETINLSYNRISSLFD---DWISSMTSLKELDLRHNNFS 456 (693)
Q Consensus 414 ~~~~l~~L~~L~Ls~n~l~~~~~---~~~~~l~~L~~L~L~~N~l~ 456 (693)
.+ ...|+.|++++|+++.++. ..+..++.+..|++.+|.++
T Consensus 385 ~l--~~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 385 NL--PAALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred hH--HHHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 11 1245555555555554321 12223344555555555544
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.69 E-value=9.5e-18 Score=174.22 Aligned_cols=216 Identities=19% Similarity=0.169 Sum_probs=129.9
Q ss_pred ccCCCCccEEEecCCCCCCcCChhhhcCC---CCCcEEEccCCCCCCCCh----hhhccC-ccCceEeccCCcCcc----
Q psy8029 292 FWNSTNITNIVLTGHKKLTSLPSTLFRDC---KKLVKLELQRNKLKYLPE----NLFESL-KELYTLNLKNNQLEN---- 359 (693)
Q Consensus 292 ~~~~~~L~~L~l~~n~~l~~l~~~~~~~~---~~L~~L~l~~n~l~~~~~----~~~~~~-~~L~~L~Ls~n~l~~---- 359 (693)
+..+++|+.|++++| .+.......|..+ ++|++|++++|.++.... ..+..+ ++|+.|++++|.++.
T Consensus 77 l~~~~~L~~L~l~~~-~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 155 (319)
T cd00116 77 LTKGCGLQELDLSDN-ALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCE 155 (319)
T ss_pred HHhcCceeEEEccCC-CCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHH
Confidence 334555666666555 3332222222223 337777777776652111 123344 677777777777763
Q ss_pred -ccCc-cCCCCCCeEeCCCCcccccc----ccccCCCCCCcEEECCCCcCcccccccCCCCccCCCCCcEEECCCCCCCc
Q psy8029 360 -ITSL-VGLSGLNSLDLSWNQLEQIN----LIAFDGLSSLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISS 433 (693)
Q Consensus 360 -l~~~-~~l~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 433 (693)
+... ..+++|++|++++|.+++.. ...+..+++|+.|++++|.++..........+..+++|++|++++|.+++
T Consensus 156 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 156 ALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 1111 45567888888888777422 12344556888888888887644322223445677889999999998886
Q ss_pred CChhHHh-c----CCCCcEEECCCCCCccCCC----cccccCCCccEEECCCCCCceeeccchhhhcccCCCCCcccccc
Q psy8029 434 LFDDWIS-S----MTSLKELDLRHNNFSFIPD----QLDSIVSNKLTLDLSFNQIAIVDLRTLEIKAAAQDPNEDSTMVA 504 (693)
Q Consensus 434 ~~~~~~~-~----l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~~~ 504 (693)
.....+. . .+.|+.|++++|.++.... ..+..+++|+.+++++|.++..+...+...... ..
T Consensus 236 ~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~---------~~ 306 (319)
T cd00116 236 AGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLE---------PG 306 (319)
T ss_pred HHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhh---------cC
Confidence 4433333 2 3789999999998873211 223455789999999999987655544432211 00
Q ss_pred ccCcEEEcCCCcc
Q psy8029 505 RSANIVILNDNPI 517 (693)
Q Consensus 505 ~~l~~l~l~~Np~ 517 (693)
..++++++.+|||
T Consensus 307 ~~~~~~~~~~~~~ 319 (319)
T cd00116 307 NELESLWVKDDSF 319 (319)
T ss_pred CchhhcccCCCCC
Confidence 3578899999886
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.62 E-value=1.2e-16 Score=165.83 Aligned_cols=58 Identities=24% Similarity=0.292 Sum_probs=33.2
Q ss_pred EEEcCCCCCC-ccChhhhCCCCCCCEEEccCCCCCCC----ChhhcCCCCCCcEEECcCCCCC
Q psy8029 154 VLDLGSNDVA-YMDPEIFKNLTSLRILNLDHNQLINL----TRAIFNNVPNLRSLDISGNNIS 211 (693)
Q Consensus 154 ~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~i~ 211 (693)
.|+|..+.++ .-....|..+.+|+.|+++++.++.. ....+...+.+++++++++.+.
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~ 64 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETG 64 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccC
Confidence 3566666555 22334455666677777777776532 1223445566777777666554
No 21
>KOG0617|consensus
Probab=99.55 E-value=1.1e-16 Score=138.74 Aligned_cols=181 Identities=24% Similarity=0.357 Sum_probs=127.2
Q ss_pred CCCCCcEEEccCCCCCCCChhhhccCccCceEeccCCcCccccCc-cCCCCCCeEeCCCCccccccccccCCCCCCcEEE
Q psy8029 319 DCKKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLENITSL-VGLSGLNSLDLSWNQLEQINLIAFDGLSSLNTVD 397 (693)
Q Consensus 319 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~l~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 397 (693)
.+.+++.|.+++|+++.+|+.. ..+.+|+.|++++|+|..+|.. +.+++|+.|+++-|++... |..|+.++.|+.||
T Consensus 31 ~~s~ITrLtLSHNKl~~vppni-a~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~~l-prgfgs~p~levld 108 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLTVVPPNI-AELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLNIL-PRGFGSFPALEVLD 108 (264)
T ss_pred chhhhhhhhcccCceeecCCcH-HHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhhcC-ccccCCCchhhhhh
Confidence 3455666667777777666654 5666777777777777776665 6677777777777666543 44677778888888
Q ss_pred CCCCcCcccccccCCCCccCCCCCcEEECCCCCCCcCChhHHhcCCCCcEEECCCCCCccCCCcccccCCCccEEECCCC
Q psy8029 398 LSHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLFDDWISSMTSLKELDLRHNNFSFIPDQLDSIVSNKLTLDLSFN 477 (693)
Q Consensus 398 L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 477 (693)
+..|.+.... .+..|..++.|+.|+|++|.+.-++++ ++.+++|+.|.++.|.+-++|.+ ++.+..|++|++.+|
T Consensus 109 ltynnl~e~~---lpgnff~m~tlralyl~dndfe~lp~d-vg~lt~lqil~lrdndll~lpke-ig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 109 LTYNNLNENS---LPGNFFYMTTLRALYLGDNDFEILPPD-VGKLTNLQILSLRDNDLLSLPKE-IGDLTRLRELHIQGN 183 (264)
T ss_pred cccccccccc---CCcchhHHHHHHHHHhcCCCcccCChh-hhhhcceeEEeeccCchhhCcHH-HHHHHHHHHHhcccc
Confidence 8887776543 466677778888888888888877776 68888888888888888887766 567778888888888
Q ss_pred CCceeeccchhhhcccCCCCCccccccccCcEEEcCCCccc
Q psy8029 478 QIAIVDLRTLEIKAAAQDPNEDSTMVARSANIVILNDNPIA 518 (693)
Q Consensus 478 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~l~~Np~~ 518 (693)
+++.++++.- .+... .+-+.+.+.+|||.
T Consensus 184 rl~vlppel~-~l~l~-----------~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 184 RLTVLPPELA-NLDLV-----------GNKQVMRMEENPWV 212 (264)
T ss_pred eeeecChhhh-hhhhh-----------hhHHHHhhhhCCCC
Confidence 8887765421 11110 11235678889986
No 22
>KOG0617|consensus
Probab=99.52 E-value=2.2e-16 Score=136.89 Aligned_cols=162 Identities=28% Similarity=0.468 Sum_probs=93.4
Q ss_pred CCCcccccEEEccCCcCcccccccccCCCCCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCC
Q psy8029 97 FDGLHFVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSL 176 (693)
Q Consensus 97 ~~~l~~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 176 (693)
+.++.+.+.|.||+| +++.+++. ++.+.+|+.|++++|+|+++|.. ++.+++|+.|+++-|++.-. |..|+.++.|
T Consensus 29 Lf~~s~ITrLtLSHN-Kl~~vppn-ia~l~nlevln~~nnqie~lp~~-issl~klr~lnvgmnrl~~l-prgfgs~p~l 104 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHN-KLTVVPPN-IAELKNLEVLNLSNNQIEELPTS-ISSLPKLRILNVGMNRLNIL-PRGFGSFPAL 104 (264)
T ss_pred ccchhhhhhhhcccC-ceeecCCc-HHHhhhhhhhhcccchhhhcChh-hhhchhhhheecchhhhhcC-ccccCCCchh
Confidence 344555556666666 66666655 45566666666666666666554 35566666666665555433 3335666666
Q ss_pred CEEEccCCCCCC-CChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCCCccccCChhhhhcccCceEEEEec
Q psy8029 177 RILNLDHNQLIN-LTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEMKYLQVIKISY 255 (693)
Q Consensus 177 ~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~ 255 (693)
+.|||.+|++.+ ..+..|..++.|+.|.|+.|.+.-+|++ .+++++|+.|.+.+|.+-++|.. ++.+..|++|.+.+
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~d-vg~lt~lqil~lrdndll~lpke-ig~lt~lrelhiqg 182 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPD-VGKLTNLQILSLRDNDLLSLPKE-IGDLTRLRELHIQG 182 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChh-hhhhcceeEEeeccCchhhCcHH-HHHHHHHHHHhccc
Confidence 666666666552 2334445556666666666666655554 35566666666666666666555 35566666666666
Q ss_pred CCCcccccCcc
Q psy8029 256 HKDSLKELPSG 266 (693)
Q Consensus 256 n~~~~~~i~~~ 266 (693)
|+ .+.+|+.
T Consensus 183 nr--l~vlppe 191 (264)
T KOG0617|consen 183 NR--LTVLPPE 191 (264)
T ss_pred ce--eeecChh
Confidence 66 4455543
No 23
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.31 E-value=1.3e-12 Score=119.27 Aligned_cols=128 Identities=29% Similarity=0.425 Sum_probs=38.6
Q ss_pred CCCCCCcEEEeeCCcccccCcccCC-CCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCCCCCCc
Q psy8029 123 KGTPQLESLNLRGNSITELYSGVFQ-YVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNVPNLR 201 (693)
Q Consensus 123 ~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 201 (693)
.+..++++|+|.+|.|+.+.. ++ .+.+|++|++++|.|+.+.. +..+++|++|++++|+|+.+.+.....+++|+
T Consensus 16 ~n~~~~~~L~L~~n~I~~Ie~--L~~~l~~L~~L~Ls~N~I~~l~~--l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQISTIEN--LGATLDKLEVLDLSNNQITKLEG--LPGLPRLKTLDLSNNRISSISEGLDKNLPNLQ 91 (175)
T ss_dssp --------------------S----TT-TT--EEE-TTS--S--TT------TT--EEE--SS---S-CHHHHHH-TT--
T ss_pred ccccccccccccccccccccc--hhhhhcCCCEEECCCCCCccccC--ccChhhhhhcccCCCCCCccccchHHhCCcCC
Confidence 344455666666666655532 22 35566666666666655532 45566666666666666655443223456666
Q ss_pred EEECcCCCCCcCCC-CcCCCCCCCcEEEcCCCccccCC---hhhhhcccCceEEEEe
Q psy8029 202 SLDISGNNISILPS-GVFSDLRKLQTFYANSNRFQMFP---KDLFAEMKYLQVIKIS 254 (693)
Q Consensus 202 ~L~L~~n~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~---~~~~~~~~~L~~L~l~ 254 (693)
+|++++|+|..+.. ..+..+++|+.|++.+|+++..+ ..++..+|+|+.||-.
T Consensus 92 ~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 92 ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred EEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 66666666654433 23455666777777777665332 2344556677766543
No 24
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.29 E-value=2.2e-12 Score=117.91 Aligned_cols=128 Identities=30% Similarity=0.355 Sum_probs=40.3
Q ss_pred cCCCCCcEEEccCCCCCCCChhhhc-cCccCceEeccCCcCccccCccCCCCCCeEeCCCCccccccccccCCCCCCcEE
Q psy8029 318 RDCKKLVKLELQRNKLKYLPENLFE-SLKELYTLNLKNNQLENITSLVGLSGLNSLDLSWNQLEQINLIAFDGLSSLNTV 396 (693)
Q Consensus 318 ~~~~~L~~L~l~~n~l~~~~~~~~~-~~~~L~~L~Ls~n~l~~l~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 396 (693)
.++.++++|++.+|.|+.+.. ++ .+.+|+.|++++|.|+.++....++.|++|++++|.|+.+.......+++|+.|
T Consensus 16 ~n~~~~~~L~L~~n~I~~Ie~--L~~~l~~L~~L~Ls~N~I~~l~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQISTIEN--LGATLDKLEVLDLSNNQITKLEGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQEL 93 (175)
T ss_dssp --------------------S----TT-TT--EEE-TTS--S--TT----TT--EEE--SS---S-CHHHHHH-TT--EE
T ss_pred ccccccccccccccccccccc--hhhhhcCCCEEECCCCCCccccCccChhhhhhcccCCCCCCccccchHHhCCcCCEE
Confidence 345566777777777766643 22 456677777777777777666667777777777777776654322346677777
Q ss_pred ECCCCcCcccccccCCCCccCCCCCcEEECCCCCCCcCCh---hHHhcCCCCcEEEC
Q psy8029 397 DLSHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLFD---DWISSMTSLKELDL 450 (693)
Q Consensus 397 ~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~---~~~~~l~~L~~L~L 450 (693)
++++|+|.... ....++.+++|+.|+|.+|.++.... ..+..+|+|+.||-
T Consensus 94 ~L~~N~I~~l~---~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 94 YLSNNKISDLN---ELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp E-TTS---SCC---CCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred ECcCCcCCChH---HhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 77777766443 23445556666666666666554321 12345555555543
No 25
>KOG1909|consensus
Probab=99.16 E-value=3.1e-12 Score=124.16 Aligned_cols=135 Identities=21% Similarity=0.130 Sum_probs=62.8
Q ss_pred ccCceEeccCCcCccccCc------cCCCCCCeEeCCCCccccc----cccccCCCCCCcEEECCCCcCcccccccCCCC
Q psy8029 345 KELYTLNLKNNQLENITSL------VGLSGLNSLDLSWNQLEQI----NLIAFDGLSSLNTVDLSHNLLTFDEYQYGYSP 414 (693)
Q Consensus 345 ~~L~~L~Ls~n~l~~l~~~------~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 414 (693)
+.|+++...+|++..-+.. +..+.|+.+.++.|.|..- ...+|..+++|+.|||.+|-++..+......+
T Consensus 157 ~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Laka 236 (382)
T KOG1909|consen 157 PKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKA 236 (382)
T ss_pred cceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHH
Confidence 3445555555544432211 3334555555555544321 22344455566666666665554433333344
Q ss_pred ccCCCCCcEEECCCCCCCcCChhHHh-----cCCCCcEEECCCCCCcc----CCCcccccCCCccEEECCCCCC
Q psy8029 415 LKQCVNLETINLSYNRISSLFDDWIS-----SMTSLKELDLRHNNFSF----IPDQLDSIVSNKLTLDLSFNQI 479 (693)
Q Consensus 415 ~~~l~~L~~L~Ls~n~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l 479 (693)
+..++.|+.|++++|.+..-....|. ..|+|++|.+.+|.|+. .....+...+.|..|+|++|++
T Consensus 237 L~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 237 LSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred hcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 55555566666666655543332222 34555555555555542 1111122344455555555555
No 26
>KOG1259|consensus
Probab=99.14 E-value=9e-12 Score=118.01 Aligned_cols=133 Identities=27% Similarity=0.340 Sum_probs=95.2
Q ss_pred CCCCcEEEccCCCCCCCChhhhccCccCceEeccCCcCccccCccCCCCCCeEeCCCCccccccccccCCCCCCcEEECC
Q psy8029 320 CKKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLENITSLVGLSGLNSLDLSWNQLEQINLIAFDGLSSLNTVDLS 399 (693)
Q Consensus 320 ~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~l~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 399 (693)
+..|+++|+++|.|+.+..+. .-.++++.|++++|.|..+.....+++|++||||+|.++.+.. .-..+.++++|.|+
T Consensus 283 Wq~LtelDLS~N~I~~iDESv-KL~Pkir~L~lS~N~i~~v~nLa~L~~L~~LDLS~N~Ls~~~G-wh~KLGNIKtL~La 360 (490)
T KOG1259|consen 283 WQELTELDLSGNLITQIDESV-KLAPKLRRLILSQNRIRTVQNLAELPQLQLLDLSGNLLAECVG-WHLKLGNIKTLKLA 360 (490)
T ss_pred Hhhhhhccccccchhhhhhhh-hhccceeEEeccccceeeehhhhhcccceEeecccchhHhhhh-hHhhhcCEeeeehh
Confidence 346788888888888777654 5678888888888888887777778888888888888776543 22346677888888
Q ss_pred CCcCcccccccCCCCccCCCCCcEEECCCCCCCcCCh-hHHhcCCCCcEEECCCCCCccCCC
Q psy8029 400 HNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLFD-DWISSMTSLKELDLRHNNFSFIPD 460 (693)
Q Consensus 400 ~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~ 460 (693)
+|.|.. ...+..+-+|..||+++|+|..+.. ..++++|.|+.+.|.+|.+..++.
T Consensus 361 ~N~iE~------LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 361 QNKIET------LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhhHhh------hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 887773 4455666777778888887765432 235677777777777777776654
No 27
>KOG1909|consensus
Probab=99.12 E-value=7.2e-12 Score=121.65 Aligned_cols=137 Identities=23% Similarity=0.247 Sum_probs=84.8
Q ss_pred CCCCcEEEccCCCCCCCCh----hhhccCccCceEeccCCcCcc--cc----CccCCCCCCeEeCCCCcccccc----cc
Q psy8029 320 CKKLVKLELQRNKLKYLPE----NLFESLKELYTLNLKNNQLEN--IT----SLVGLSGLNSLDLSWNQLEQIN----LI 385 (693)
Q Consensus 320 ~~~L~~L~l~~n~l~~~~~----~~~~~~~~L~~L~Ls~n~l~~--l~----~~~~l~~L~~L~Ls~n~l~~~~----~~ 385 (693)
-+.|+++....|.+...+. ..|...+.|+.+.++.|.|.. +. .+..+++|+.|||.+|.++... ..
T Consensus 156 ~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Lak 235 (382)
T KOG1909|consen 156 KPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAK 235 (382)
T ss_pred CcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHH
Confidence 3556666666666654432 335556667777777776654 21 1156777777777777766432 23
Q ss_pred ccCCCCCCcEEECCCCcCcccccccCCCCc-cCCCCCcEEECCCCCCCcC----ChhHHhcCCCCcEEECCCCCCc
Q psy8029 386 AFDGLSSLNTVDLSHNLLTFDEYQYGYSPL-KQCVNLETINLSYNRISSL----FDDWISSMTSLKELDLRHNNFS 456 (693)
Q Consensus 386 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~-~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 456 (693)
++..+++|+.|++++|.+...+......++ ...|+|+.|.+.+|.|+.- ....+...+.|..|+|++|++.
T Consensus 236 aL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 236 ALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 455567777888888777754321111111 3367888888888888742 2233456788999999999984
No 28
>KOG3207|consensus
Probab=99.10 E-value=1.3e-11 Score=123.20 Aligned_cols=207 Identities=20% Similarity=0.174 Sum_probs=116.6
Q ss_pred CCccEEEcCCCCCcccCc-ccccCCCCccEEEecCCCCCCcCC--hhhhcCCCCCcEEEccCCCCCCCC-hhhhccCccC
Q psy8029 272 PLLNTVILGESSIAELPS-DLFWNSTNITNIVLTGHKKLTSLP--STLFRDCKKLVKLELQRNKLKYLP-ENLFESLKEL 347 (693)
Q Consensus 272 ~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~l~~n~~l~~l~--~~~~~~~~~L~~L~l~~n~l~~~~-~~~~~~~~~L 347 (693)
.+|+++.+.++.+...+. .....|++++.|++++| -+.... ..+...+++|+.|+++.|.+.... ...-..+++|
T Consensus 121 kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~N-L~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~l 199 (505)
T KOG3207|consen 121 KKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRN-LFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHL 199 (505)
T ss_pred HhhhheeecCccccccchhhhhhhCCcceeecchhh-hHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhh
Confidence 344444444443333221 22234555555555555 333222 122345677777777777654221 1111245667
Q ss_pred ceEeccCCcCcc--ccCc-cCCCCCCeEeCCCCccccccccccCCCCCCcEEECCCCcCcccccccCCCCccCCCCCcEE
Q psy8029 348 YTLNLKNNQLEN--ITSL-VGLSGLNSLDLSWNQLEQINLIAFDGLSSLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETI 424 (693)
Q Consensus 348 ~~L~Ls~n~l~~--l~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L 424 (693)
+.|.++.|.++. +... ..+|+|+.|+|.+|....+......-+..|+.|+|++|.+...+ .......++.|+.|
T Consensus 200 K~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~---~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 200 KQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFD---QGYKVGTLPGLNQL 276 (505)
T ss_pred heEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccc---cccccccccchhhh
Confidence 777777777764 2212 66777777777777644444444445667777777777766543 12345567777777
Q ss_pred ECCCCCCCcCC-hhH-----HhcCCCCcEEECCCCCCccCCC-cccccCCCccEEECCCCCCcee
Q psy8029 425 NLSYNRISSLF-DDW-----ISSMTSLKELDLRHNNFSFIPD-QLDSIVSNKLTLDLSFNQIAIV 482 (693)
Q Consensus 425 ~Ls~n~l~~~~-~~~-----~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~ 482 (693)
+++.|.+..+. |+. -...++|+.|++..|+|..+.. ..+..+++|+.|.+..|.++.-
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNKE 341 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccccc
Confidence 77777776542 111 2356788888888888765432 2234556677777777777643
No 29
>KOG3207|consensus
Probab=99.05 E-value=1.6e-11 Score=122.48 Aligned_cols=65 Identities=29% Similarity=0.368 Sum_probs=38.0
Q ss_pred CCCCCCcEEEcCCCCCCccCh-hhhCCCCCCCEEEccCCCCCCCCh--hhcCCCCCCcEEECcCCCCC
Q psy8029 147 QYVPKLQVLDLGSNDVAYMDP-EIFKNLTSLRILNLDHNQLINLTR--AIFNNVPNLRSLDISGNNIS 211 (693)
Q Consensus 147 ~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~--~~~~~l~~L~~L~L~~n~i~ 211 (693)
+++.+|+.+.|.++.+..... .....|++++.|||+.|-+....+ .....+++|+.|+++.|.+.
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~ 185 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLS 185 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhccccccccc
Confidence 356667777776665554332 234566777777777766654332 33455666666666666554
No 30
>KOG1259|consensus
Probab=99.05 E-value=4.5e-11 Score=113.34 Aligned_cols=132 Identities=27% Similarity=0.329 Sum_probs=107.5
Q ss_pred ccccEEEccCCcCcccccccccCCCCCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEE
Q psy8029 101 HFVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILN 180 (693)
Q Consensus 101 ~~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 180 (693)
..|+++|||+| .|+.+... ..-.|.++.|++++|+|..+.. ++.+++|+.||||+|.++.+.- +-..+.+.+.|.
T Consensus 284 q~LtelDLS~N-~I~~iDES-vKL~Pkir~L~lS~N~i~~v~n--La~L~~L~~LDLS~N~Ls~~~G-wh~KLGNIKtL~ 358 (490)
T KOG1259|consen 284 QELTELDLSGN-LITQIDES-VKLAPKLRRLILSQNRIRTVQN--LAELPQLQLLDLSGNLLAECVG-WHLKLGNIKTLK 358 (490)
T ss_pred hhhhhcccccc-chhhhhhh-hhhccceeEEeccccceeeehh--hhhcccceEeecccchhHhhhh-hHhhhcCEeeee
Confidence 46889999999 99888765 5667899999999999988765 6789999999999998887643 235788899999
Q ss_pred ccCCCCCCCChhhcCCCCCCcEEECcCCCCCcCCC-CcCCCCCCCcEEEcCCCccccCCh
Q psy8029 181 LDHNQLINLTRAIFNNVPNLRSLDISGNNISILPS-GVFSDLRKLQTFYANSNRFQMFPK 239 (693)
Q Consensus 181 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~ 239 (693)
|++|.+..+.. +..+-+|..||+++|+|..+.. ..++++|.|+++.+.+|.+..++.
T Consensus 359 La~N~iE~LSG--L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 359 LAQNKIETLSG--LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhhhhHhhhhh--hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 99998876653 6777889999999999886543 347889999999999999887664
No 31
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.03 E-value=3e-10 Score=121.50 Aligned_cols=175 Identities=33% Similarity=0.448 Sum_probs=84.7
Q ss_pred CccEEEecCCCCCCcCChhhhcCCC-CCcEEEccCCCCCCCChhhhccCccCceEeccCCcCccccCcc-CCCCCCeEeC
Q psy8029 297 NITNIVLTGHKKLTSLPSTLFRDCK-KLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLENITSLV-GLSGLNSLDL 374 (693)
Q Consensus 297 ~L~~L~l~~n~~l~~l~~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~l~~~~-~l~~L~~L~L 374 (693)
.+..+++.+| .+.++++.. .... +|++|++++|++..++.. ...+++|+.|++++|+++.++... ..+.|+.|++
T Consensus 117 ~l~~L~l~~n-~i~~i~~~~-~~~~~nL~~L~l~~N~i~~l~~~-~~~l~~L~~L~l~~N~l~~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 117 NLTSLDLDNN-NITDIPPLI-GLLKSNLKELDLSDNKIESLPSP-LRNLPNLKNLDLSFNDLSDLPKLLSNLSNLNNLDL 193 (394)
T ss_pred ceeEEecCCc-ccccCcccc-ccchhhcccccccccchhhhhhh-hhccccccccccCCchhhhhhhhhhhhhhhhheec
Confidence 3444444444 444444332 1221 455555555555444321 234555555555555555554442 4455555555
Q ss_pred CCCccccccccccCCCCCCcEEECCCCcCcccccccCCCCccCCCCCcEEECCCCCCCcCChhHHhcCCCCcEEECCCCC
Q psy8029 375 SWNQLEQINLIAFDGLSSLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLFDDWISSMTSLKELDLRHNN 454 (693)
Q Consensus 375 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 454 (693)
++|.+..++... .....|++|.+++|.+.. ....+..+.++..+.+.+|++... +..+..+++++.|++++|+
T Consensus 194 s~N~i~~l~~~~-~~~~~L~~l~~~~N~~~~-----~~~~~~~~~~l~~l~l~~n~~~~~-~~~~~~l~~l~~L~~s~n~ 266 (394)
T COG4886 194 SGNKISDLPPEI-ELLSALEELDLSNNSIIE-----LLSSLSNLKNLSGLELSNNKLEDL-PESIGNLSNLETLDLSNNQ 266 (394)
T ss_pred cCCccccCchhh-hhhhhhhhhhhcCCccee-----cchhhhhcccccccccCCceeeec-cchhccccccceecccccc
Confidence 555555444321 222335555555553221 234445555555555555555543 2334555556666666666
Q ss_pred CccCCCcccccCCCccEEECCCCCCceee
Q psy8029 455 FSFIPDQLDSIVSNKLTLDLSFNQIAIVD 483 (693)
Q Consensus 455 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 483 (693)
++.++. +....+++.|++++|.+..+.
T Consensus 267 i~~i~~--~~~~~~l~~L~~s~n~~~~~~ 293 (394)
T COG4886 267 ISSISS--LGSLTNLRELDLSGNSLSNAL 293 (394)
T ss_pred cccccc--ccccCccCEEeccCccccccc
Confidence 665554 445555666666666655443
No 32
>KOG0531|consensus
Probab=99.00 E-value=4.2e-11 Score=128.13 Aligned_cols=242 Identities=26% Similarity=0.371 Sum_probs=113.8
Q ss_pred CCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCCCCCCcEEEC
Q psy8029 126 PQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNVPNLRSLDI 205 (693)
Q Consensus 126 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 205 (693)
..++.+++..|.+..+... +..+.+|+.|++.+|.|..+... +..+++|++|++++|+|+.+.. +..++.|+.|++
T Consensus 72 ~~l~~l~l~~n~i~~~~~~-l~~~~~l~~l~l~~n~i~~i~~~-l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l 147 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAKILNH-LSKLKSLEALDLYDNKIEKIENL-LSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNL 147 (414)
T ss_pred HhHHhhccchhhhhhhhcc-cccccceeeeeccccchhhcccc-hhhhhcchheeccccccccccc--hhhccchhhhee
Confidence 3344444444444332111 23444555555555554444321 3445555555555555554443 334444555555
Q ss_pred cCCCCCcCCCCcCCCCCCCcEEEcCCCccccCChhhhhcccCceEEEEecCCCcccccCccccCCCCCccEEEcCCCCCc
Q psy8029 206 SGNNISILPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEMKYLQVIKISYHKDSLKELPSGLFANLPLLNTVILGESSIA 285 (693)
Q Consensus 206 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~i~~~~~~~l~~L~~L~l~~n~l~ 285 (693)
++|.|+.+.. +..++.|+.+++++|.+..+.......+.+++.+++.+|. +..+.. +..+..+..+++..|.++
T Consensus 148 ~~N~i~~~~~--~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~--i~~i~~--~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 148 SGNLISDISG--LESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNS--IREIEG--LDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred ccCcchhccC--CccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCc--hhcccc--hHHHHHHHHhhcccccce
Confidence 5555555443 3335555555555555554444102334455555555554 222211 122222222233333333
Q ss_pred ccCcccccCCCCccEEEecCCCCCCcCChhhhcCCC--CCcEEEccCCCCCCCChhhhccCccCceEeccCCcCccccCc
Q psy8029 286 ELPSDLFWNSTNITNIVLTGHKKLTSLPSTLFRDCK--KLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLENITSL 363 (693)
Q Consensus 286 ~~~~~~~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~--~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~l~~~ 363 (693)
.+. .. ..+. +|+++++++|.+..++.. +..+..+..+++.+|++..+...
T Consensus 222 ~~~-------------------------~l--~~~~~~~L~~l~l~~n~i~~~~~~-~~~~~~l~~l~~~~n~~~~~~~~ 273 (414)
T KOG0531|consen 222 KLE-------------------------GL--NELVMLHLRELYLSGNRISRSPEG-LENLKNLPVLDLSSNRISNLEGL 273 (414)
T ss_pred ecc-------------------------Cc--ccchhHHHHHHhcccCcccccccc-ccccccccccchhhccccccccc
Confidence 221 10 0111 255666666655554321 34566666666666666666655
Q ss_pred cCCCCCCeEeCCCCcccccc---cc-ccCCCCCCcEEECCCCcCcc
Q psy8029 364 VGLSGLNSLDLSWNQLEQIN---LI-AFDGLSSLNTVDLSHNLLTF 405 (693)
Q Consensus 364 ~~l~~L~~L~Ls~n~l~~~~---~~-~~~~l~~L~~L~L~~n~l~~ 405 (693)
...+.+..+....+.+.... .. .....+.++...+..|.+..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 274 ERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred cccchHHHhccCcchhcchhhhhccccccccccccccccccCcccc
Confidence 55566666666666655221 11 13345667777777776664
No 33
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.98 E-value=6.4e-10 Score=118.93 Aligned_cols=179 Identities=32% Similarity=0.441 Sum_probs=121.6
Q ss_pred CCccEEEcCCCCCcccCcccccCC-CCccEEEecCCCCCCcCChhhhcCCCCCcEEEccCCCCCCCChhhhccCccCceE
Q psy8029 272 PLLNTVILGESSIAELPSDLFWNS-TNITNIVLTGHKKLTSLPSTLFRDCKKLVKLELQRNKLKYLPENLFESLKELYTL 350 (693)
Q Consensus 272 ~~L~~L~l~~n~l~~~~~~~~~~~-~~L~~L~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L 350 (693)
+.++.+++.++.++.+++.. ... .+|+.|++++| .+..++.. .+.+++|+.|++++|++++++... ...+.|+.|
T Consensus 116 ~~l~~L~l~~n~i~~i~~~~-~~~~~nL~~L~l~~N-~i~~l~~~-~~~l~~L~~L~l~~N~l~~l~~~~-~~~~~L~~L 191 (394)
T COG4886 116 TNLTSLDLDNNNITDIPPLI-GLLKSNLKELDLSDN-KIESLPSP-LRNLPNLKNLDLSFNDLSDLPKLL-SNLSNLNNL 191 (394)
T ss_pred cceeEEecCCcccccCcccc-ccchhhccccccccc-chhhhhhh-hhccccccccccCCchhhhhhhhh-hhhhhhhhe
Confidence 45555666666655555432 223 26666777666 66666433 256777777888877777777642 256777788
Q ss_pred eccCCcCccccCc-cCCCCCCeEeCCCCccccccccccCCCCCCcEEECCCCcCcccccccCCCCccCCCCCcEEECCCC
Q psy8029 351 NLKNNQLENITSL-VGLSGLNSLDLSWNQLEQINLIAFDGLSSLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYN 429 (693)
Q Consensus 351 ~Ls~n~l~~l~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n 429 (693)
++++|++..+|.. .....|++|.+++|.+.... ..+..+..+..+.+.+|++... ...+..+++++.|++++|
T Consensus 192 ~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~~~~-~~~~~~~~l~~l~l~~n~~~~~-----~~~~~~l~~l~~L~~s~n 265 (394)
T COG4886 192 DLSGNKISDLPPEIELLSALEELDLSNNSIIELL-SSLSNLKNLSGLELSNNKLEDL-----PESIGNLSNLETLDLSNN 265 (394)
T ss_pred eccCCccccCchhhhhhhhhhhhhhcCCcceecc-hhhhhcccccccccCCceeeec-----cchhccccccceeccccc
Confidence 8888888777776 35555888888887533332 2456677777777888877632 455667777888888888
Q ss_pred CCCcCChhHHhcCCCCcEEECCCCCCccCCCcc
Q psy8029 430 RISSLFDDWISSMTSLKELDLRHNNFSFIPDQL 462 (693)
Q Consensus 430 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 462 (693)
.++.+.. ++...+++.|++++|.+...++..
T Consensus 266 ~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 266 QISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred ccccccc--ccccCccCEEeccCccccccchhh
Confidence 8888766 678888888888888888766553
No 34
>KOG0531|consensus
Probab=98.92 E-value=1.5e-10 Score=123.97 Aligned_cols=218 Identities=24% Similarity=0.339 Sum_probs=100.8
Q ss_pred CCCcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEc
Q psy8029 150 PKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFYA 229 (693)
Q Consensus 150 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 229 (693)
+.++.++...+.+...... ...+..++.+++..|.+..+.. .+..+.+|+.|++..|.|..+... +..+++|++|++
T Consensus 49 ~~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~~~~-~l~~~~~l~~l~l~~n~i~~i~~~-l~~~~~L~~L~l 125 (414)
T KOG0531|consen 49 SDLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAKILN-HLSKLKSLEALDLYDNKIEKIENL-LSSLVNLQVLDL 125 (414)
T ss_pred chhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhhhhc-ccccccceeeeeccccchhhcccc-hhhhhcchheec
Confidence 3444445544433322221 1344555555566666655222 245556666666666666655432 344555666666
Q ss_pred CCCccccCChhhhhcccCceEEEEecCCCcccccCccccCCCCCccEEEcCCCCCcccCcccccCCCCccEEEecCCCCC
Q psy8029 230 NSNRFQMFPKDLFAEMKYLQVIKISYHKDSLKELPSGLFANLPLLNTVILGESSIAELPSDLFWNSTNITNIVLTGHKKL 309 (693)
Q Consensus 230 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~l 309 (693)
++|.|+.+.. +..++.|+.|++.+|. +..+.. +..+..|+.+++++|.+..+...
T Consensus 126 s~N~I~~i~~--l~~l~~L~~L~l~~N~--i~~~~~--~~~l~~L~~l~l~~n~i~~ie~~------------------- 180 (414)
T KOG0531|consen 126 SFNKITKLEG--LSTLTLLKELNLSGNL--ISDISG--LESLKSLKLLDLSYNRIVDIEND------------------- 180 (414)
T ss_pred cccccccccc--hhhccchhhheeccCc--chhccC--CccchhhhcccCCcchhhhhhhh-------------------
Confidence 6665555443 2334445555555554 323322 22233344444444333333221
Q ss_pred CcCChhhhcCCCCCcEEEccCCCCCCCChhhhccCccCceEeccCCcCccccCccCCCC--CCeEeCCCCcccccccccc
Q psy8029 310 TSLPSTLFRDCKKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLENITSLVGLSG--LNSLDLSWNQLEQINLIAF 387 (693)
Q Consensus 310 ~~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~l~~~~~l~~--L~~L~Ls~n~l~~~~~~~~ 387 (693)
. ...+.+++.+++.+|.+..+.. +..+..+..+++..|.++.+.....+.. |+.+++++|.+..+. ..+
T Consensus 181 -----~-~~~~~~l~~l~l~~n~i~~i~~--~~~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~n~i~~~~-~~~ 251 (414)
T KOG0531|consen 181 -----E-LSELISLEELDLGGNSIREIEG--LDLLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSGNRISRSP-EGL 251 (414)
T ss_pred -----h-hhhccchHHHhccCCchhcccc--hHHHHHHHHhhcccccceeccCcccchhHHHHHHhcccCcccccc-ccc
Confidence 1 1344555555555555554443 2233344444555555555444333332 555555555554432 123
Q ss_pred CCCCCCcEEECCCCcCc
Q psy8029 388 DGLSSLNTVDLSHNLLT 404 (693)
Q Consensus 388 ~~l~~L~~L~L~~n~l~ 404 (693)
..+..+..|++.+|++.
T Consensus 252 ~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 252 ENLKNLPVLDLSSNRIS 268 (414)
T ss_pred cccccccccchhhcccc
Confidence 33444444555544444
No 35
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.92 E-value=9.6e-10 Score=82.59 Aligned_cols=59 Identities=34% Similarity=0.590 Sum_probs=30.2
Q ss_pred cccEEEccCCcCcccccccccCCCCCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCC
Q psy8029 102 FVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSND 161 (693)
Q Consensus 102 ~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 161 (693)
+|++|++++| +++.+++++|.++++|++|++++|.++.+++++|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n-~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNN-KLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSS-TESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCC-CCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 4455555555 5555555555555555555555555555554455555555555555443
No 36
>KOG0532|consensus
Probab=98.92 E-value=4.4e-11 Score=123.06 Aligned_cols=175 Identities=27% Similarity=0.372 Sum_probs=95.5
Q ss_pred cccEEEccCCcCcccccccccCCCCCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEc
Q psy8029 102 FVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNL 181 (693)
Q Consensus 102 ~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 181 (693)
--...|++.| .+..++.. +..+..|+.+.|..|.+..++.. ..++..|..|+|+.|+++.++... ..| -|+.|-+
T Consensus 76 dt~~aDlsrN-R~~elp~~-~~~f~~Le~liLy~n~~r~ip~~-i~~L~~lt~l~ls~NqlS~lp~~l-C~l-pLkvli~ 150 (722)
T KOG0532|consen 76 DTVFADLSRN-RFSELPEE-ACAFVSLESLILYHNCIRTIPEA-ICNLEALTFLDLSSNQLSHLPDGL-CDL-PLKVLIV 150 (722)
T ss_pred chhhhhcccc-ccccCchH-HHHHHHHHHHHHHhccceecchh-hhhhhHHHHhhhccchhhcCChhh-hcC-cceeEEE
Confidence 3344556666 55555544 34445555566666655555543 355566666666666655554432 333 2556666
Q ss_pred cCCCCCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCCCccccCChhhhhcccCceEEEEecCCCccc
Q psy8029 182 DHNQLINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEMKYLQVIKISYHKDSLK 261 (693)
Q Consensus 182 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~ 261 (693)
++|+++.++++ ++..+.|..||.+.|.+..+++. +..+.+|+.|.+..|.+..++.... .-.|..||++.|+ +.
T Consensus 151 sNNkl~~lp~~-ig~~~tl~~ld~s~nei~slpsq-l~~l~slr~l~vrRn~l~~lp~El~--~LpLi~lDfScNk--is 224 (722)
T KOG0532|consen 151 SNNKLTSLPEE-IGLLPTLAHLDVSKNEIQSLPSQ-LGYLTSLRDLNVRRNHLEDLPEELC--SLPLIRLDFSCNK--IS 224 (722)
T ss_pred ecCccccCCcc-cccchhHHHhhhhhhhhhhchHH-hhhHHHHHHHHHhhhhhhhCCHHHh--CCceeeeecccCc--ee
Confidence 66666555544 34555666666666666555554 3455556666666666655555532 2345556666555 44
Q ss_pred ccCccccCCCCCccEEEcCCCCCcccC
Q psy8029 262 ELPSGLFANLPLLNTVILGESSIAELP 288 (693)
Q Consensus 262 ~i~~~~~~~l~~L~~L~l~~n~l~~~~ 288 (693)
.+|.. |..+..|++|.|.+|.+.+-|
T Consensus 225 ~iPv~-fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 225 YLPVD-FRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred ecchh-hhhhhhheeeeeccCCCCCCh
Confidence 55554 555666666666666555443
No 37
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.91 E-value=7.9e-10 Score=83.05 Aligned_cols=61 Identities=43% Similarity=0.756 Sum_probs=47.0
Q ss_pred CCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCC
Q psy8029 126 PQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQL 186 (693)
Q Consensus 126 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 186 (693)
++|++|++++|+++.+++.+|.++++|++|++++|.++.+++.+|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4677788888877777777777777888888887777777777777777777777777764
No 38
>KOG0532|consensus
Probab=98.86 E-value=1.2e-10 Score=119.95 Aligned_cols=204 Identities=26% Similarity=0.314 Sum_probs=154.6
Q ss_pred ccCccccC-CCCCccEEEcCCCCCcccCcccccCCCCccEEEecCCCCCCcCChhhhcCCCCCcEEEccCCCCCCCChhh
Q psy8029 262 ELPSGLFA-NLPLLNTVILGESSIAELPSDLFWNSTNITNIVLTGHKKLTSLPSTLFRDCKKLVKLELQRNKLKYLPENL 340 (693)
Q Consensus 262 ~i~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 340 (693)
.+|.+.+. .+..-...+++.|++..+|..+ ..+..|+.+.+..| .+..+|..+ ..+..|+.+|++.|+++.+|..+
T Consensus 64 ~fpr~a~~~~ltdt~~aDlsrNR~~elp~~~-~~f~~Le~liLy~n-~~r~ip~~i-~~L~~lt~l~ls~NqlS~lp~~l 140 (722)
T KOG0532|consen 64 EFPRGAASYDLTDTVFADLSRNRFSELPEEA-CAFVSLESLILYHN-CIRTIPEAI-CNLEALTFLDLSSNQLSHLPDGL 140 (722)
T ss_pred cCCCccccccccchhhhhccccccccCchHH-HHHHHHHHHHHHhc-cceecchhh-hhhhHHHHhhhccchhhcCChhh
Confidence 44444333 3445567888899988888654 55667888888888 888888765 67888999999999999888876
Q ss_pred hccCccCceEeccCCcCccccCc-cCCCCCCeEeCCCCccccccccccCCCCCCcEEECCCCcCcccccccCCCCccCCC
Q psy8029 341 FESLKELYTLNLKNNQLENITSL-VGLSGLNSLDLSWNQLEQINLIAFDGLSSLNTVDLSHNLLTFDEYQYGYSPLKQCV 419 (693)
Q Consensus 341 ~~~~~~L~~L~Ls~n~l~~l~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~l~ 419 (693)
+ .+ -|+.|-+++|+++.+|.. .....|..||.+.|.+..+.+ .++++.+|+.|.+..|++... +..+. .-
T Consensus 141 C-~l-pLkvli~sNNkl~~lp~~ig~~~tl~~ld~s~nei~slps-ql~~l~slr~l~vrRn~l~~l-----p~El~-~L 211 (722)
T KOG0532|consen 141 C-DL-PLKVLIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQSLPS-QLGYLTSLRDLNVRRNHLEDL-----PEELC-SL 211 (722)
T ss_pred h-cC-cceeEEEecCccccCCcccccchhHHHhhhhhhhhhhchH-HhhhHHHHHHHHHhhhhhhhC-----CHHHh-CC
Confidence 4 34 488999999999998877 677788999999999888766 567788899999998888765 44444 44
Q ss_pred CCcEEECCCCCCCcCChhHHhcCCCCcEEECCCCCCccCCCcccc--cCCCccEEECCCCC
Q psy8029 420 NLETINLSYNRISSLFDDWISSMTSLKELDLRHNNFSFIPDQLDS--IVSNKLTLDLSFNQ 478 (693)
Q Consensus 420 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~ 478 (693)
.|..||+|.|+++.++.+ |..+..|++|-|.+|.+..-+..... ...-.++|+..-++
T Consensus 212 pLi~lDfScNkis~iPv~-fr~m~~Lq~l~LenNPLqSPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 212 PLIRLDFSCNKISYLPVD-FRKMRHLQVLQLENNPLQSPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred ceeeeecccCceeecchh-hhhhhhheeeeeccCCCCCChHHHHhccceeeeeeecchhcc
Confidence 688999999999987655 78999999999999999887665321 12224677776664
No 39
>KOG4658|consensus
Probab=98.85 E-value=2.3e-09 Score=122.50 Aligned_cols=272 Identities=21% Similarity=0.283 Sum_probs=116.5
Q ss_pred cccEEEeecCCCCccCCCCccCCCcccccEEEccCCcC-cccccccccCCCCCCcEEEeeCC-cccccCcccCCCCCCCc
Q psy8029 76 TINTLAFSNSPSNVGVLSPPYFDGLHFVKHILLSHNKE-ITGLHKDIFKGTPQLESLNLRGN-SITELYSGVFQYVPKLQ 153 (693)
Q Consensus 76 ~L~~L~l~~~~~~i~~l~~~~~~~l~~L~~L~Ls~n~~-i~~~~~~~~~~l~~L~~L~L~~n-~i~~~~~~~~~~l~~L~ 153 (693)
.++++.+.++ .+..+. .-..++.|++|-+..|.. +..++...|..++.|++|||++| .+..+|.. .+.+.+|+
T Consensus 524 ~~rr~s~~~~--~~~~~~--~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~-I~~Li~Lr 598 (889)
T KOG4658|consen 524 SVRRMSLMNN--KIEHIA--GSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSS-IGELVHLR 598 (889)
T ss_pred heeEEEEecc--chhhcc--CCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChH-Hhhhhhhh
Confidence 3445555444 443333 112223455555555511 44455555555555555555544 22334443 24555555
Q ss_pred EEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCCCCCCcEEECcCCCCC--cCCCCcCCCCCCCcEEEcCC
Q psy8029 154 VLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNVPNLRSLDISGNNIS--ILPSGVFSDLRKLQTFYANS 231 (693)
Q Consensus 154 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~--~~~~~~~~~l~~L~~L~l~~ 231 (693)
+|+++++.+..+|.. +.++..|.+|++..+.-....+.....+++|++|.+...... ......+..+++|+.+....
T Consensus 599 yL~L~~t~I~~LP~~-l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~ 677 (889)
T KOG4658|consen 599 YLDLSDTGISHLPSG-LGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITI 677 (889)
T ss_pred cccccCCCccccchH-HHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeec
Confidence 555555555544333 455555555555554433333333444555555555443311 11111122333333333322
Q ss_pred CccccCChhhhhcccCce----EEEEecCCCcccccCccccCCCCCccEEEcCCCCCcccCcccccC------CCCccEE
Q psy8029 232 NRFQMFPKDLFAEMKYLQ----VIKISYHKDSLKELPSGLFANLPLLNTVILGESSIAELPSDLFWN------STNITNI 301 (693)
Q Consensus 232 n~l~~~~~~~~~~~~~L~----~L~l~~n~~~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~------~~~L~~L 301 (693)
... .+.. .+..+..|. .+.+.++. .... ...+..+.+|+.|.+.++.+.++....+.. .+++..+
T Consensus 678 ~s~-~~~e-~l~~~~~L~~~~~~l~~~~~~--~~~~-~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~ 752 (889)
T KOG4658|consen 678 SSV-LLLE-DLLGMTRLRSLLQSLSIEGCS--KRTL-ISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKV 752 (889)
T ss_pred chh-HhHh-hhhhhHHHHHHhHhhhhcccc--ccee-ecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHH
Confidence 211 0000 011122222 22222221 1111 122456677777777777665433222111 1233333
Q ss_pred EecCCCCCCcCChhhhcCCCCCcEEEccCCCCCCCChhhhccCccCceEeccCCcCccc
Q psy8029 302 VLTGHKKLTSLPSTLFRDCKKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLENI 360 (693)
Q Consensus 302 ~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~l 360 (693)
.+.++.....+....| .++|+.|.+..+...+-+......+..++.+.+..+.+...
T Consensus 753 ~~~~~~~~r~l~~~~f--~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 753 SILNCHMLRDLTWLLF--APHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred Hhhccccccccchhhc--cCcccEEEEecccccccCCCHHHHhhhcccEEecccccccc
Confidence 3344423333332222 56777777777755433332334555555555555544443
No 40
>KOG4658|consensus
Probab=98.77 E-value=1e-08 Score=117.28 Aligned_cols=128 Identities=25% Similarity=0.372 Sum_probs=70.5
Q ss_pred ccccEEEccCCcCcccccccccCCCCCCcEEEeeCCc--ccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCE
Q psy8029 101 HFVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNS--ITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRI 178 (693)
Q Consensus 101 ~~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~--i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 178 (693)
...+...+-+| .+..++.. ..++.|++|-+.+|. +..++...|..++.|++|||++|.=-.-.|..++.+-+||+
T Consensus 523 ~~~rr~s~~~~-~~~~~~~~--~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 523 NSVRRMSLMNN-KIEHIAGS--SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hheeEEEEecc-chhhccCC--CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 44555555555 55554432 234456666666664 44555555666666666666655322223344566666666
Q ss_pred EEccCCCCCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCCC
Q psy8029 179 LNLDHNQLINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFYANSN 232 (693)
Q Consensus 179 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n 232 (693)
|+++++.+..++.. ++++..|.+|++..+.-....++....+++|++|.+...
T Consensus 600 L~L~~t~I~~LP~~-l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 600 LDLSDTGISHLPSG-LGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred ccccCCCccccchH-HHHHHhhheeccccccccccccchhhhcccccEEEeecc
Confidence 66666666655443 466666666666655544333444445666666655543
No 41
>KOG1859|consensus
Probab=98.73 E-value=2.4e-10 Score=120.64 Aligned_cols=131 Identities=26% Similarity=0.376 Sum_probs=84.1
Q ss_pred CCCCCeEeCCCCccccccccccCCCCCCcEEECCCCcCcccccccCCCCccCCCCCcEEECCCCCCCcCChhHHhcCCCC
Q psy8029 366 LSGLNSLDLSWNQLEQINLIAFDGLSSLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLFDDWISSMTSL 445 (693)
Q Consensus 366 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 445 (693)
...|...+.++|.+..++. ++.-++.|+.|+|++|+++. ...+..|+.|++|||++|.++.++.-...++. |
T Consensus 163 Wn~L~~a~fsyN~L~~mD~-SLqll~ale~LnLshNk~~~------v~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L 234 (1096)
T KOG1859|consen 163 WNKLATASFSYNRLVLMDE-SLQLLPALESLNLSHNKFTK------VDNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-L 234 (1096)
T ss_pred hhhHhhhhcchhhHHhHHH-HHHHHHHhhhhccchhhhhh------hHHHHhcccccccccccchhccccccchhhhh-h
Confidence 3456666777777665543 45556777777777777773 33566677777777777777776654444554 7
Q ss_pred cEEECCCCCCccCCCcccccCCCccEEECCCCCCceeeccchhhhcccCCCCCccccccccCcEEEcCCCcccc
Q psy8029 446 KELDLRHNNFSFIPDQLDSIVSNKLTLDLSFNQIAIVDLRTLEIKAAAQDPNEDSTMVARSANIVILNDNPIAC 519 (693)
Q Consensus 446 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~l~~Np~~c 519 (693)
+.|.+++|.++.+-. +..+.+|+.||+++|-|.+.. .+..+... ..|+.|.|.|||+-|
T Consensus 235 ~~L~lrnN~l~tL~g--ie~LksL~~LDlsyNll~~hs--eL~pLwsL-----------s~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 235 QLLNLRNNALTTLRG--IENLKSLYGLDLSYNLLSEHS--ELEPLWSL-----------SSLIVLWLEGNPLCC 293 (1096)
T ss_pred eeeeecccHHHhhhh--HHhhhhhhccchhHhhhhcch--hhhHHHHH-----------HHHHHHhhcCCcccc
Confidence 777777777776533 356677777788777776432 22222221 336677888888765
No 42
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.71 E-value=2.8e-08 Score=87.88 Aligned_cols=126 Identities=21% Similarity=0.406 Sum_probs=53.9
Q ss_pred CCCccCCCcccccEEEccCCcCcccccccccCCCCCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhC
Q psy8029 92 LSPPYFDGLHFVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFK 171 (693)
Q Consensus 92 l~~~~~~~l~~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 171 (693)
|+..+|.++.+|+.+.+.. .+..+...+|.++++|+.+.+.++ +..++..+|.++++|+.+.+.+ .+..+....|.
T Consensus 3 i~~~~F~~~~~l~~i~~~~--~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~ 78 (129)
T PF13306_consen 3 IGNNAFYNCSNLESITFPN--TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFS 78 (129)
T ss_dssp E-TTTTTT-TT--EEEETS--T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTT
T ss_pred ECHHHHhCCCCCCEEEECC--CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccc
Confidence 4445566666666666653 455666666666666666666553 5556666666665666666644 44455555555
Q ss_pred CCCCCCEEEccCCCCCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCC
Q psy8029 172 NLTSLRILNLDHNQLINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKL 224 (693)
Q Consensus 172 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 224 (693)
.+++|+.+++..+ +..+....|.++ +|+.+.+.. .+..++...|.++++|
T Consensus 79 ~~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 79 NCTNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp T-TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred ccccccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 5666666665543 444444555554 555555543 4444455555555444
No 43
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.67 E-value=5.4e-08 Score=86.00 Aligned_cols=126 Identities=22% Similarity=0.397 Sum_probs=61.8
Q ss_pred ccccccCCCCCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCC
Q psy8029 117 LHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNN 196 (693)
Q Consensus 117 ~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 196 (693)
++..+|.++++|+.+.+.. .+..++..+|.++++|+.+.+.++ +..+...+|.++.+|+.+.+.+ .+..+....|..
T Consensus 3 i~~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~ 79 (129)
T PF13306_consen 3 IGNNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSN 79 (129)
T ss_dssp E-TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT
T ss_pred ECHHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccc
Confidence 4556677777777777653 466677777777777777777664 6666666677776677777754 555555566666
Q ss_pred CCCCcEEECcCCCCCcCCCCcCCCCCCCcEEEcCCCccccCChhhhhcccCc
Q psy8029 197 VPNLRSLDISGNNISILPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEMKYL 248 (693)
Q Consensus 197 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L 248 (693)
+++|+.+++..+ +..+....|.++ +++.+.+.. .+..++...|.++++|
T Consensus 80 ~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 80 CTNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp -TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred cccccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 667777766554 555666666665 666666654 4455555556555554
No 44
>PLN03150 hypothetical protein; Provisional
Probab=98.67 E-value=5.1e-08 Score=109.31 Aligned_cols=111 Identities=23% Similarity=0.148 Sum_probs=62.7
Q ss_pred CcEEECCCCcCcccccccCCCCccCCCCCcEEECCCCCCCcCChhHHhcCCCCcEEECCCCCCccCCCcccccCCCccEE
Q psy8029 393 LNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLFDDWISSMTSLKELDLRHNNFSFIPDQLDSIVSNKLTL 472 (693)
Q Consensus 393 L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 472 (693)
++.|+|++|.+.+. .+..+..+++|+.|+|++|.+++..|..+..+++|+.|+|++|++++..+..+..+++|+.|
T Consensus 420 v~~L~L~~n~L~g~----ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L 495 (623)
T PLN03150 420 IDGLGLDNQGLRGF----IPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRIL 495 (623)
T ss_pred EEEEECCCCCcccc----CCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEE
Confidence 45556666655543 24445556666666666666665555556666666666666666665555555566666666
Q ss_pred ECCCCCCceeeccchhhhcccCCCCCccccccccCcEEEcCCCccccc
Q psy8029 473 DLSFNQIAIVDLRTLEIKAAAQDPNEDSTMVARSANIVILNDNPIACN 520 (693)
Q Consensus 473 ~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~l~~Np~~c~ 520 (693)
+|++|++++..+..+.... .++..+++.+|+..|.
T Consensus 496 ~Ls~N~l~g~iP~~l~~~~-------------~~~~~l~~~~N~~lc~ 530 (623)
T PLN03150 496 NLNGNSLSGRVPAALGGRL-------------LHRASFNFTDNAGLCG 530 (623)
T ss_pred ECcCCcccccCChHHhhcc-------------ccCceEEecCCccccC
Confidence 6666666654444433221 1233566666666654
No 45
>KOG1859|consensus
Probab=98.58 E-value=1.1e-09 Score=115.70 Aligned_cols=181 Identities=22% Similarity=0.296 Sum_probs=91.6
Q ss_pred CCCCCCCCccEEEEEcCCCCCc-cHHHHhhhcC-------cccccEEEeecCCCCccCCCCccCCCcccccEEEccCCcC
Q psy8029 42 LPEQNLGPFNAVTFTFCPLPDE-NFISLFSKLN-------ITTINTLAFSNSPSNVGVLSPPYFDGLHFVKHILLSHNKE 113 (693)
Q Consensus 42 l~~~~~~~l~~L~l~~c~l~~~-~~~~~~~~~~-------~~~L~~L~l~~~~~~i~~l~~~~~~~l~~L~~L~Ls~n~~ 113 (693)
+....|+.+++|++++|++... ++..+-..+. +..|+.+ ++.|...++.-+ .-..|...+.++| .
T Consensus 103 i~ifpF~sLr~LElrg~~L~~~~GL~~lr~qLe~LIC~~Sl~Al~~v-~ascggd~~ns~-----~Wn~L~~a~fsyN-~ 175 (1096)
T KOG1859|consen 103 ISIFPFRSLRVLELRGCDLSTAKGLQELRHQLEKLICHNSLDALRHV-FASCGGDISNSP-----VWNKLATASFSYN-R 175 (1096)
T ss_pred ceeccccceeeEEecCcchhhhhhhHHHHHhhhhhhhhccHHHHHHH-HHHhccccccch-----hhhhHhhhhcchh-h
Confidence 4445678999999999998764 3444322111 0111111 111100111100 0124555555665 5
Q ss_pred cccccccccCCCCCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhh
Q psy8029 114 ITGLHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAI 193 (693)
Q Consensus 114 i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 193 (693)
+..+... +.-++.|+.|+|++|+++... .+..|++|++|||++|.+..++.-....|. |+.|.+++|.++.+-.
T Consensus 176 L~~mD~S-Lqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL~g-- 249 (1096)
T KOG1859|consen 176 LVLMDES-LQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTLRG-- 249 (1096)
T ss_pred HHhHHHH-HHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhhhh--
Confidence 5544432 444556666666666665543 245566666666666666555443333343 6666666666554432
Q ss_pred cCCCCCCcEEECcCCCCCcCCC-CcCCCCCCCcEEEcCCCccc
Q psy8029 194 FNNVPNLRSLDISGNNISILPS-GVFSDLRKLQTFYANSNRFQ 235 (693)
Q Consensus 194 ~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~l~~n~l~ 235 (693)
+.++.+|+.||+++|-+.+... ..+..+..|+.|+|.+|.+-
T Consensus 250 ie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 250 IENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred HHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 4556666666666665543221 11333455666666666554
No 46
>PLN03150 hypothetical protein; Provisional
Probab=98.57 E-value=1.3e-07 Score=106.06 Aligned_cols=109 Identities=21% Similarity=0.207 Sum_probs=94.2
Q ss_pred CCCeEeCCCCccccccccccCCCCCCcEEECCCCcCcccccccCCCCccCCCCCcEEECCCCCCCcCChhHHhcCCCCcE
Q psy8029 368 GLNSLDLSWNQLEQINLIAFDGLSSLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLFDDWISSMTSLKE 447 (693)
Q Consensus 368 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 447 (693)
.++.|+|++|.+.+..+..+..+++|+.|+|++|.+++. .+..+..+++|+.|+|++|++++..|..++.+++|+.
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~----iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~ 494 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGN----IPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRI 494 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCc----CChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCE
Confidence 478899999999999999999999999999999999865 4667889999999999999999999999999999999
Q ss_pred EECCCCCCccCCCccccc-CCCccEEECCCCCCc
Q psy8029 448 LDLRHNNFSFIPDQLDSI-VSNKLTLDLSFNQIA 480 (693)
Q Consensus 448 L~L~~N~l~~~~~~~~~~-l~~L~~L~L~~N~l~ 480 (693)
|+|++|++++..+..+.. ..++..+++.+|...
T Consensus 495 L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 495 LNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred EECcCCcccccCChHHhhccccCceEEecCCccc
Confidence 999999999776665544 345678888888654
No 47
>KOG2120|consensus
Probab=98.27 E-value=3.5e-08 Score=94.10 Aligned_cols=64 Identities=19% Similarity=0.119 Sum_probs=26.9
Q ss_pred CCCcccccEEEccCCcCcccccccccCCCCCCcEEEeeCCc-cccc-CcccCCCCCCCcEEEcCCCC
Q psy8029 97 FDGLHFVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNS-ITEL-YSGVFQYVPKLQVLDLGSND 161 (693)
Q Consensus 97 ~~~l~~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~-i~~~-~~~~~~~l~~L~~L~Ls~n~ 161 (693)
++.|.+|+.|.+.++ ++.+-....++.-.+|+.|+++.+. ++.. ..-.|..|+.|..|+++.|.
T Consensus 206 Ls~C~kLk~lSlEg~-~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~ 271 (419)
T KOG2120|consen 206 LSQCSKLKNLSLEGL-RLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCF 271 (419)
T ss_pred HHHHHhhhhcccccc-ccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhh
Confidence 344445555555544 4444333334444445555554431 2211 11123444455555555443
No 48
>KOG1644|consensus
Probab=98.20 E-value=2.1e-06 Score=77.86 Aligned_cols=103 Identities=25% Similarity=0.412 Sum_probs=54.8
Q ss_pred CCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCCh-hhcCCCCCCcEEEC
Q psy8029 127 QLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTR-AIFNNVPNLRSLDI 205 (693)
Q Consensus 127 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L 205 (693)
+...+||++|.+..++. |..++.|.+|.+++|+|+.+.+..-.-+++|+.|.|.+|+|..+.. ..+..+++|++|.+
T Consensus 43 ~~d~iDLtdNdl~~l~~--lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltl 120 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKLDN--LPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTL 120 (233)
T ss_pred ccceecccccchhhccc--CCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeee
Confidence 45555666665544433 5555666666666666666655544445556666666665554332 22445556666666
Q ss_pred cCCCCCcCCC---CcCCCCCCCcEEEcCC
Q psy8029 206 SGNNISILPS---GVFSDLRKLQTFYANS 231 (693)
Q Consensus 206 ~~n~i~~~~~---~~~~~l~~L~~L~l~~ 231 (693)
-+|.++.-.. ..+..+|+|+.||...
T Consensus 121 l~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 121 LGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred cCCchhcccCceeEEEEecCcceEeehhh
Confidence 6665553221 2234455555555543
No 49
>KOG2120|consensus
Probab=98.20 E-value=4.4e-08 Score=93.39 Aligned_cols=179 Identities=19% Similarity=0.170 Sum_probs=88.5
Q ss_pred CceEEEEecCCCcccccCccccCCCCCccEEEcCCCCCcccCcccccCCCCccEEEecCCCCCCcCCh-hhhcCCCCCcE
Q psy8029 247 YLQVIKISYHKDSLKELPSGLFANLPLLNTVILGESSIAELPSDLFWNSTNITNIVLTGHKKLTSLPS-TLFRDCKKLVK 325 (693)
Q Consensus 247 ~L~~L~l~~n~~~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~l~~l~~-~~~~~~~~L~~ 325 (693)
.|+.+|++...+....+ ...++.|.+|+.|.+.++.+.+-.....+...+|+.++++.+..+++... -+|+.|+.|.+
T Consensus 186 Rlq~lDLS~s~it~stl-~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTL-HGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhHHhhcchhheeHHHH-HHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 35555555443221111 12244555666666666655543223345556777777777766655442 34667777777
Q ss_pred EEccCCCCCC-C-ChhhhccCccCceEeccCCcC----ccccCc-cCCCCCCeEeCCCCc-cccccccccCCCCCCcEEE
Q psy8029 326 LELQRNKLKY-L-PENLFESLKELYTLNLKNNQL----ENITSL-VGLSGLNSLDLSWNQ-LEQINLIAFDGLSSLNTVD 397 (693)
Q Consensus 326 L~l~~n~l~~-~-~~~~~~~~~~L~~L~Ls~n~l----~~l~~~-~~l~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~ 397 (693)
|+++-|.+.. . ....-.--++|+.|++++++- +.+... ..+++|.+||||+|. ++.....+|..++.|++|.
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lS 344 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLS 344 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeee
Confidence 7777775541 1 111111134566777776541 112222 556666666666653 2222223344455566666
Q ss_pred CCCCcCcccccccCCCCccCCCCCcEEECCCC
Q psy8029 398 LSHNLLTFDEYQYGYSPLKQCVNLETINLSYN 429 (693)
Q Consensus 398 L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n 429 (693)
++.|-..... ....+...|+|.+||+-++
T Consensus 345 lsRCY~i~p~---~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 345 LSRCYDIIPE---TLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhhcCCChH---HeeeeccCcceEEEEeccc
Confidence 6555432111 1122344455555555444
No 50
>KOG4341|consensus
Probab=98.19 E-value=8.2e-08 Score=95.94 Aligned_cols=133 Identities=22% Similarity=0.214 Sum_probs=63.9
Q ss_pred CCCCccEEEecCCCCCCcCChhh-hcCCCCCcEEEccCCC-CCCCChhhh-ccCccCceEeccCCcCccc---cCc-cCC
Q psy8029 294 NSTNITNIVLTGHKKLTSLPSTL-FRDCKKLVKLELQRNK-LKYLPENLF-ESLKELYTLNLKNNQLENI---TSL-VGL 366 (693)
Q Consensus 294 ~~~~L~~L~l~~n~~l~~l~~~~-~~~~~~L~~L~l~~n~-l~~~~~~~~-~~~~~L~~L~Ls~n~l~~l---~~~-~~l 366 (693)
++..|+.+..+++..+++.+-+. -.++.+|+.+.++.|+ ++......+ .+++.|+.+++.++....- ... .++
T Consensus 292 ~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C 371 (483)
T KOG4341|consen 292 GCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNC 371 (483)
T ss_pred hhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCC
Confidence 45566666666665544433222 2345666666666664 222221111 3455666666666543321 111 455
Q ss_pred CCCCeEeCCCCccc-ccccccc----CCCCCCcEEECCCCcCcccccccCCCCccCCCCCcEEECCCC
Q psy8029 367 SGLNSLDLSWNQLE-QINLIAF----DGLSSLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYN 429 (693)
Q Consensus 367 ~~L~~L~Ls~n~l~-~~~~~~~----~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n 429 (693)
+.|+.+.++++... +.....+ ..+..|+.+.|++++.+.+. ....+..|++|+.+++-++
T Consensus 372 ~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~---~Le~l~~c~~Leri~l~~~ 436 (483)
T KOG4341|consen 372 PRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDA---TLEHLSICRNLERIELIDC 436 (483)
T ss_pred chhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHH---HHHHHhhCcccceeeeech
Confidence 66666666655432 1111111 22445566666665554332 1233445555555555555
No 51
>KOG4341|consensus
Probab=98.17 E-value=1.4e-07 Score=94.34 Aligned_cols=180 Identities=19% Similarity=0.138 Sum_probs=89.2
Q ss_pred CCccEEEEEcCCCC-CccHHHHhhhcCcccccEEEeecCCCCccCCCCccC-CCcccccEEEccCCcCccccccc-ccCC
Q psy8029 48 GPFNAVTFTFCPLP-DENFISLFSKLNITTINTLAFSNSPSNVGVLSPPYF-DGLHFVKHILLSHNKEITGLHKD-IFKG 124 (693)
Q Consensus 48 ~~l~~L~l~~c~l~-~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~l~~~~~-~~l~~L~~L~Ls~n~~i~~~~~~-~~~~ 124 (693)
+.+++|.+++|.-. +..+.... ..+++++.|++.++ ..+++..-..+ ..+++|++|++..|..|++.... .-.+
T Consensus 138 g~lk~LSlrG~r~v~~sslrt~~--~~CpnIehL~l~gc-~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~g 214 (483)
T KOG4341|consen 138 GFLKELSLRGCRAVGDSSLRTFA--SNCPNIEHLALYGC-KKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEG 214 (483)
T ss_pred cccccccccccccCCcchhhHHh--hhCCchhhhhhhcc-eeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHh
Confidence 46677778777533 22333321 25677777777776 34443332223 34777777777776566664332 4456
Q ss_pred CCCCcEEEeeCCc-ccc--cCcccCCCCCCCcEEEcCCCCCCccChhhh----CCCCCCCEEEccCC-CCCCCCh-hhcC
Q psy8029 125 TPQLESLNLRGNS-ITE--LYSGVFQYVPKLQVLDLGSNDVAYMDPEIF----KNLTSLRILNLDHN-QLINLTR-AIFN 195 (693)
Q Consensus 125 l~~L~~L~L~~n~-i~~--~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~----~~l~~L~~L~L~~n-~l~~~~~-~~~~ 195 (693)
+++|++|+++++. |++ +.. .+.++..++.+.+.+|. +...+++ +.+..+..+++..+ .+++..- ..-.
T Consensus 215 C~kL~~lNlSwc~qi~~~gv~~-~~rG~~~l~~~~~kGC~--e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~ 291 (483)
T KOG4341|consen 215 CRKLKYLNLSWCPQISGNGVQA-LQRGCKELEKLSLKGCL--ELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIAC 291 (483)
T ss_pred hhhHHHhhhccCchhhcCcchH-Hhccchhhhhhhhcccc--cccHHHHHHHhccChHhhccchhhhccccchHHHHHhh
Confidence 7777777777763 222 111 24556666666666542 2222222 23344445554443 2222221 1112
Q ss_pred CCCCCcEEECcCCCC-CcCCCCc-CCCCCCCcEEEcCCCc
Q psy8029 196 NVPNLRSLDISGNNI-SILPSGV-FSDLRKLQTFYANSNR 233 (693)
Q Consensus 196 ~l~~L~~L~L~~n~i-~~~~~~~-~~~l~~L~~L~l~~n~ 233 (693)
.+..|+.|+.+++.- +..+... -.++++|+.+-++.++
T Consensus 292 ~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~ 331 (483)
T KOG4341|consen 292 GCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQ 331 (483)
T ss_pred hhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccc
Confidence 345566666655432 1111111 1334555555555553
No 52
>KOG1644|consensus
Probab=98.15 E-value=2.7e-06 Score=77.13 Aligned_cols=86 Identities=26% Similarity=0.336 Sum_probs=50.6
Q ss_pred ccCceEeccCCcCccccCccCCCCCCeEeCCCCccccccccccCCCCCCcEEECCCCcCcccccccCCCCccCCCCCcEE
Q psy8029 345 KELYTLNLKNNQLENITSLVGLSGLNSLDLSWNQLEQINLIAFDGLSSLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETI 424 (693)
Q Consensus 345 ~~L~~L~Ls~n~l~~l~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L 424 (693)
.....++|++|.+..++.+..++.|.+|.+.+|+|+.+.+.--.-++.|+.|.|.+|.|...+ ...++..||+|++|
T Consensus 42 d~~d~iDLtdNdl~~l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~---dl~pLa~~p~L~~L 118 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLRKLDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELG---DLDPLASCPKLEYL 118 (233)
T ss_pred cccceecccccchhhcccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhh---hcchhccCCcccee
Confidence 345556666666666666666666666666666666666654444566666666666665443 23445555555555
Q ss_pred ECCCCCCCc
Q psy8029 425 NLSYNRISS 433 (693)
Q Consensus 425 ~Ls~n~l~~ 433 (693)
.+-+|.++.
T Consensus 119 tll~Npv~~ 127 (233)
T KOG1644|consen 119 TLLGNPVEH 127 (233)
T ss_pred eecCCchhc
Confidence 555555443
No 53
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.05 E-value=6.2e-07 Score=84.64 Aligned_cols=207 Identities=16% Similarity=0.187 Sum_probs=126.5
Q ss_pred CCCccEEEEEcCCCCCccHHHHhhhc-CcccccEEEeecCCCCccC-----CC------CccCCCcccccEEEccCCcCc
Q psy8029 47 LGPFNAVTFTFCPLPDENFISLFSKL-NITTINTLAFSNSPSNVGV-----LS------PPYFDGLHFVKHILLSHNKEI 114 (693)
Q Consensus 47 ~~~l~~L~l~~c~l~~~~~~~~~~~~-~~~~L~~L~l~~~~~~i~~-----l~------~~~~~~l~~L~~L~Ls~n~~i 114 (693)
+..++++++|++.+..+....++... ..++|+..+++.. ++. ++ ..++.+|++|+..+||.| .+
T Consensus 29 ~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~---ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDN-Af 104 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDA---FTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDN-AF 104 (388)
T ss_pred hcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhh---hhcccHHHHHHHHHHHHHHHhcCCcceeeecccc-cc
Confidence 35678899999988877666665543 3556777777652 221 11 245677888888888888 66
Q ss_pred cccc----ccccCCCCCCcEEEeeCCcccccCccc-------------CCCCCCCcEEEcCCCCCCccCh----hhhCCC
Q psy8029 115 TGLH----KDIFKGTPQLESLNLRGNSITELYSGV-------------FQYVPKLQVLDLGSNDVAYMDP----EIFKNL 173 (693)
Q Consensus 115 ~~~~----~~~~~~l~~L~~L~L~~n~i~~~~~~~-------------~~~l~~L~~L~Ls~n~l~~~~~----~~~~~l 173 (693)
..-. .+.++....|++|.+++|.+..+...- ...-|.|++.....|++..-+. ..|..-
T Consensus 105 g~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh 184 (388)
T COG5238 105 GSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESH 184 (388)
T ss_pred CcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhh
Confidence 5422 234566678888888888664332211 1345678888888887764432 223333
Q ss_pred CCCCEEEccCCCCCCC--Ch---hhcCCCCCCcEEECcCCCCCcCCC----CcCCCCCCCcEEEcCCCccccCChhh-hh
Q psy8029 174 TSLRILNLDHNQLINL--TR---AIFNNVPNLRSLDISGNNISILPS----GVFSDLRKLQTFYANSNRFQMFPKDL-FA 243 (693)
Q Consensus 174 ~~L~~L~L~~n~l~~~--~~---~~~~~l~~L~~L~L~~n~i~~~~~----~~~~~l~~L~~L~l~~n~l~~~~~~~-~~ 243 (693)
.+|+++.+.+|.|..- .. ..+..+.+|+.||+..|.++.... .++..++.|+.|.+.+|-++.-.... +.
T Consensus 185 ~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~ 264 (388)
T COG5238 185 ENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLR 264 (388)
T ss_pred cCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHH
Confidence 5788888888877532 11 223456788888888887774332 23445666778888777766322211 11
Q ss_pred -----cccCceEEEEecCC
Q psy8029 244 -----EMKYLQVIKISYHK 257 (693)
Q Consensus 244 -----~~~~L~~L~l~~n~ 257 (693)
..++|+.|...+|.
T Consensus 265 ~f~e~~~p~l~~L~~~Yne 283 (388)
T COG5238 265 RFNEKFVPNLMPLPGDYNE 283 (388)
T ss_pred HhhhhcCCCccccccchhh
Confidence 23556666666654
No 54
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=98.04 E-value=3.8e-06 Score=102.80 Aligned_cols=80 Identities=23% Similarity=0.344 Sum_probs=63.7
Q ss_pred ECCCCCCceeeccchhhhcccCCCCCccccccccCcEEEcCCCcccccCCcHHHHHHHhcccccceeeeeeeccCceeec
Q psy8029 473 DLSFNQIAIVDLRTLEIKAAAQDPNEDSTMVARSANIVILNDNPIACNCSNYDLIRFVSKKMTKTVYQMLELVTDNLECF 552 (693)
Q Consensus 473 ~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~l~~Np~~c~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 552 (693)
||++|+|+.++...|..+ .+|+.|+|++|||.|||++.||.+|++.... . ......+.|.
T Consensus 1 DLSnN~LstLp~g~F~~L--------------~sL~~LdLsgNPw~CDC~L~WL~~WL~~~~v-~-----v~~~~~i~Ca 60 (2740)
T TIGR00864 1 DISNNKISTIEEGICANL--------------CNLSEIDLSGNPFECDCGLARLPRWAEEKGV-K-----VRQPEAALCA 60 (2740)
T ss_pred CCCCCcCCccChHHhccC--------------CCceEEEeeCCccccccccHHHHHHHHhcCc-c-----ccCCcccCCC
Confidence 578888888888777765 3478999999999999999999999987521 1 1233568899
Q ss_pred CC---CCccccccCCCCCcccCC
Q psy8029 553 GN---AGVGINSVRPENLTCDTK 572 (693)
Q Consensus 553 ~~---~~~~~~~l~~~~l~c~~~ 572 (693)
.| +|..+.+++..++.|..+
T Consensus 61 sP~~LrG~~L~~l~~~d~~C~~~ 83 (2740)
T TIGR00864 61 GPGALAGQPLLGIPLLDSGCDEE 83 (2740)
T ss_pred CChHHCCCCcccCCcccCCCCCc
Confidence 99 899999999888888744
No 55
>KOG2982|consensus
Probab=98.01 E-value=9.8e-07 Score=84.42 Aligned_cols=83 Identities=23% Similarity=0.350 Sum_probs=44.8
Q ss_pred CCcEEEcCCCCCCccCh-hhh-CCCCCCCEEEccCCCCCCCCh--hhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcE
Q psy8029 151 KLQVLDLGSNDVAYMDP-EIF-KNLTSLRILNLDHNQLINLTR--AIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQT 226 (693)
Q Consensus 151 ~L~~L~Ls~n~l~~~~~-~~~-~~l~~L~~L~L~~n~l~~~~~--~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 226 (693)
.++.|.+.++.|..... ..| ..++.++++||.+|+|+.-.. ..+.++|.|+.|+++.|++.......=....+|++
T Consensus 46 a~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~ 125 (418)
T KOG2982|consen 46 ALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRV 125 (418)
T ss_pred chhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEE
Confidence 34455555665554332 112 346777888888887775332 34566777777777777665432211022345555
Q ss_pred EEcCCCc
Q psy8029 227 FYANSNR 233 (693)
Q Consensus 227 L~l~~n~ 233 (693)
|-|.+..
T Consensus 126 lVLNgT~ 132 (418)
T KOG2982|consen 126 LVLNGTG 132 (418)
T ss_pred EEEcCCC
Confidence 5554433
No 56
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.99 E-value=1.1e-06 Score=83.09 Aligned_cols=43 Identities=26% Similarity=0.422 Sum_probs=22.2
Q ss_pred CCCCCccEEEcCCCCCccc-C---cccccCCCCccEEEecCCCCCCcC
Q psy8029 269 ANLPLLNTVILGESSIAEL-P---SDLFWNSTNITNIVLTGHKKLTSL 312 (693)
Q Consensus 269 ~~l~~L~~L~l~~n~l~~~-~---~~~~~~~~~L~~L~l~~n~~l~~l 312 (693)
-.||+|+.+++++|.+..- + .+..+..+.|++|.+++| .++.+
T Consensus 89 lkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~Nn-GlGp~ 135 (388)
T COG5238 89 LKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNN-GLGPI 135 (388)
T ss_pred hcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecC-CCCcc
Confidence 3455555555555554321 1 123344566666666666 55544
No 57
>KOG4579|consensus
Probab=97.95 E-value=5.5e-07 Score=76.18 Aligned_cols=109 Identities=17% Similarity=0.298 Sum_probs=62.4
Q ss_pred CcEEEccCCCCCCCChhh--hccCccCceEeccCCcCccccCc--cCCCCCCeEeCCCCccccccccccCCCCCCcEEEC
Q psy8029 323 LVKLELQRNKLKYLPENL--FESLKELYTLNLKNNQLENITSL--VGLSGLNSLDLSWNQLEQINLIAFDGLSSLNTVDL 398 (693)
Q Consensus 323 L~~L~l~~n~l~~~~~~~--~~~~~~L~~L~Ls~n~l~~l~~~--~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 398 (693)
+..+++++|++..++... .....+|+..+|++|.+..+|.. ..++.++.|++++|.|++++.+ +..++.|+.|++
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE-~Aam~aLr~lNl 107 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEE-LAAMPALRSLNL 107 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHH-HhhhHHhhhccc
Confidence 445555666555444321 23344555566666666665544 4455666666666666666554 666677777777
Q ss_pred CCCcCcccccccCCCCccCCCCCcEEECCCCCCCcCChh
Q psy8029 399 SHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLFDD 437 (693)
Q Consensus 399 ~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 437 (693)
+.|.+... +.++..+.++-.|+..+|.+..++.+
T Consensus 108 ~~N~l~~~-----p~vi~~L~~l~~Lds~~na~~eid~d 141 (177)
T KOG4579|consen 108 RFNPLNAE-----PRVIAPLIKLDMLDSPENARAEIDVD 141 (177)
T ss_pred ccCccccc-----hHHHHHHHhHHHhcCCCCccccCcHH
Confidence 77766643 34444455566666666655555544
No 58
>KOG2982|consensus
Probab=97.92 E-value=2.4e-06 Score=81.77 Aligned_cols=64 Identities=22% Similarity=0.229 Sum_probs=37.2
Q ss_pred CCCcEEECCCCcCcccccccCCCCccCCCCCcEEECCCCCCCcCC-hhHHhcCCCCcEEECCCCCCcc
Q psy8029 391 SSLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYNRISSLF-DDWISSMTSLKELDLRHNNFSF 457 (693)
Q Consensus 391 ~~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L~~N~l~~ 457 (693)
+++..+.+..|.+.... ....+...+.+..|+|+.++|.... -+.+.++++|..|.+++|.+..
T Consensus 199 pnv~sv~v~e~PlK~~s---~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 199 PNVNSVFVCEGPLKTES---SEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred ccchheeeecCcccchh---hcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 45555666666555443 1233344455556777777666432 2445677777777777777653
No 59
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.88 E-value=1e-05 Score=55.49 Aligned_cols=38 Identities=39% Similarity=0.581 Sum_probs=23.2
Q ss_pred CCcEEECCCCCCCcCChhHHhcCCCCcEEECCCCCCccC
Q psy8029 420 NLETINLSYNRISSLFDDWISSMTSLKELDLRHNNFSFI 458 (693)
Q Consensus 420 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 458 (693)
+|++|++++|+|+++++. ++++++|+.|++++|+|+.+
T Consensus 2 ~L~~L~l~~N~i~~l~~~-l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPE-LSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp T-SEEEETSSS-SSHGGH-GTTCTTSSEEEETSSCCSBE
T ss_pred cceEEEccCCCCcccCch-HhCCCCCCEEEecCCCCCCC
Confidence 566666666666665543 56666666666666666654
No 60
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.81 E-value=2.4e-05 Score=53.67 Aligned_cols=38 Identities=37% Similarity=0.609 Sum_probs=18.0
Q ss_pred cccEEEccCCcCcccccccccCCCCCCcEEEeeCCccccc
Q psy8029 102 FVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNSITEL 141 (693)
Q Consensus 102 ~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~ 141 (693)
+|++|++++| +|+++++. ++++++|++|++++|+|+++
T Consensus 2 ~L~~L~l~~N-~i~~l~~~-l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 2 NLEELDLSNN-QITDLPPE-LSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp T-SEEEETSS-S-SSHGGH-GTTCTTSSEEEETSSCCSBE
T ss_pred cceEEEccCC-CCcccCch-HhCCCCCCEEEecCCCCCCC
Confidence 4455555555 55554442 44555555555555555443
No 61
>KOG4579|consensus
Probab=97.80 E-value=1.8e-06 Score=73.06 Aligned_cols=90 Identities=21% Similarity=0.272 Sum_probs=43.6
Q ss_pred CCCCcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCCCCCCcEEECcCCCCCcCCCCcCCCCCCCcEEE
Q psy8029 149 VPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNVPNLRSLDISGNNISILPSGVFSDLRKLQTFY 228 (693)
Q Consensus 149 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 228 (693)
...|+..+|++|.+...++..-...+.++.|++++|.|++++.+ +..++.|+.|+++.|.+...+...+ .+.++-.|+
T Consensus 52 ~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE-~Aam~aLr~lNl~~N~l~~~p~vi~-~L~~l~~Ld 129 (177)
T KOG4579|consen 52 GYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEE-LAAMPALRSLNLRFNPLNAEPRVIA-PLIKLDMLD 129 (177)
T ss_pred CceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHH-HhhhHHhhhcccccCccccchHHHH-HHHhHHHhc
Confidence 34444455555555555444333344555555555555555444 4555555555555555544433322 244555555
Q ss_pred cCCCccccCChh
Q psy8029 229 ANSNRFQMFPKD 240 (693)
Q Consensus 229 l~~n~l~~~~~~ 240 (693)
..+|.+..++..
T Consensus 130 s~~na~~eid~d 141 (177)
T KOG4579|consen 130 SPENARAEIDVD 141 (177)
T ss_pred CCCCccccCcHH
Confidence 555555544444
No 62
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.73 E-value=0.00012 Score=75.62 Aligned_cols=13 Identities=8% Similarity=-0.102 Sum_probs=6.5
Q ss_pred ccCceEEEEecCC
Q psy8029 245 MKYLQVIKISYHK 257 (693)
Q Consensus 245 ~~~L~~L~l~~n~ 257 (693)
+.+++.|++++|.
T Consensus 51 ~~~l~~L~Is~c~ 63 (426)
T PRK15386 51 ARASGRLYIKDCD 63 (426)
T ss_pred hcCCCEEEeCCCC
Confidence 4455555555543
No 63
>KOG3665|consensus
Probab=97.66 E-value=2.3e-05 Score=87.90 Aligned_cols=133 Identities=19% Similarity=0.239 Sum_probs=76.2
Q ss_pred ccccEEEccCCcCcccccc-cccCCCCCCcEEEeeCCccccc-CcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCE
Q psy8029 101 HFVKHILLSHNKEITGLHK-DIFKGTPQLESLNLRGNSITEL-YSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRI 178 (693)
Q Consensus 101 ~~L~~L~Ls~n~~i~~~~~-~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 178 (693)
.+|++|++++...+..-.+ ....-+|.|+.|.+++-.+..- -...+.++++|..||+|+++++.+ ..++++++|+.
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 4677777776533322221 1123367777777776554321 112345677777777777777766 44677777777
Q ss_pred EEccCCCCCCC-ChhhcCCCCCCcEEECcCCCCCcCCC------CcCCCCCCCcEEEcCCCccc
Q psy8029 179 LNLDHNQLINL-TRAIFNNVPNLRSLDISGNNISILPS------GVFSDLRKLQTFYANSNRFQ 235 (693)
Q Consensus 179 L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~i~~~~~------~~~~~l~~L~~L~l~~n~l~ 235 (693)
|.+.+=.+..- .-..+.++++|+.||+|.......+. +....+|+|+.||.+++.+.
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~ 263 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDIN 263 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchh
Confidence 77776555431 12335567777777777654433220 11234677777777766554
No 64
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.60 E-value=0.00057 Score=70.76 Aligned_cols=91 Identities=24% Similarity=0.395 Sum_probs=54.8
Q ss_pred CCCCccEEEcCCCCCcccCcccccCCCCccEEEecCCCCCCcCChhhhcCCCCCcEEEccCC-CCCCCChhhhccCccCc
Q psy8029 270 NLPLLNTVILGESSIAELPSDLFWNSTNITNIVLTGHKKLTSLPSTLFRDCKKLVKLELQRN-KLKYLPENLFESLKELY 348 (693)
Q Consensus 270 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~~L~~L~l~~n-~l~~~~~~~~~~~~~L~ 348 (693)
.+.+++.|++++|.++.+|. -..+|+.|.+++|..++.+|..+ .++|++|++++| .+..+|. .|+
T Consensus 50 ~~~~l~~L~Is~c~L~sLP~----LP~sLtsL~Lsnc~nLtsLP~~L---P~nLe~L~Ls~Cs~L~sLP~-------sLe 115 (426)
T PRK15386 50 EARASGRLYIKDCDIESLPV----LPNELTEITIENCNNLTTLPGSI---PEGLEKLTVCHCPEISGLPE-------SVR 115 (426)
T ss_pred HhcCCCEEEeCCCCCcccCC----CCCCCcEEEccCCCCcccCCchh---hhhhhheEccCccccccccc-------ccc
Confidence 35677888888887777762 23467888887776676666532 356777777777 5544442 356
Q ss_pred eEeccCCcCccccCccCCCCCCeEeCCC
Q psy8029 349 TLNLKNNQLENITSLVGLSGLNSLDLSW 376 (693)
Q Consensus 349 ~L~Ls~n~l~~l~~~~~l~~L~~L~Ls~ 376 (693)
.|+++.+....++. -.++|+.|.+.+
T Consensus 116 ~L~L~~n~~~~L~~--LPssLk~L~I~~ 141 (426)
T PRK15386 116 SLEIKGSATDSIKN--VPNGLTSLSINS 141 (426)
T ss_pred eEEeCCCCCccccc--CcchHhheeccc
Confidence 66666554433322 123456666543
No 65
>KOG3665|consensus
Probab=97.36 E-value=6.2e-05 Score=84.45 Aligned_cols=133 Identities=17% Similarity=0.184 Sum_probs=70.6
Q ss_pred cCCCCCcEEEccCCCCCCC-ChhhhccCccCceEeccCCcCccccCccCCCCCCeEeCCCCcccc-ccccccCCCCCCcE
Q psy8029 318 RDCKKLVKLELQRNKLKYL-PENLFESLKELYTLNLKNNQLENITSLVGLSGLNSLDLSWNQLEQ-INLIAFDGLSSLNT 395 (693)
Q Consensus 318 ~~~~~L~~L~l~~n~l~~~-~~~~~~~~~~L~~L~Ls~n~l~~l~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~ 395 (693)
.-+|+|+.|.+++-.+..- -...+.++++|..||+|+.+++.+...+.+++|+.|.+.+=.+.. ..-..+.++++|+.
T Consensus 145 ~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~v 224 (699)
T KOG3665|consen 145 TMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNLSGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRV 224 (699)
T ss_pred hhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCcHHHhccccHHHHhccCCCCCchhhHHHHhcccCCCe
Confidence 3456666666665444311 122345566666666666666666444666666666666555543 22223445777777
Q ss_pred EECCCCcCccccc--ccCCCCccCCCCCcEEECCCCCCCcCChh-HHhcCCCCcEEEC
Q psy8029 396 VDLSHNLLTFDEY--QYGYSPLKQCVNLETINLSYNRISSLFDD-WISSMTSLKELDL 450 (693)
Q Consensus 396 L~L~~n~l~~~~~--~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L 450 (693)
||+|......... ..-......+|.|+.||.|++.+.+..-+ .+...++|+.+.+
T Consensus 225 LDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~i~~ 282 (699)
T KOG3665|consen 225 LDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQQIAA 282 (699)
T ss_pred eeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHhhhhh
Confidence 7777654442210 00012233477888888887766643322 2224455554443
No 66
>KOG2739|consensus
Probab=97.33 E-value=7.2e-05 Score=71.11 Aligned_cols=83 Identities=29% Similarity=0.425 Sum_probs=35.1
Q ss_pred CCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCC--CCCccChhhhCCCCCCCEEEccCCCCCCCCh-hhcCCCCCCcE
Q psy8029 126 PQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSN--DVAYMDPEIFKNLTSLRILNLDHNQLINLTR-AIFNNVPNLRS 202 (693)
Q Consensus 126 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n--~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~ 202 (693)
..|+.|++.+..++.+.. |-.+++|++|.++.| ++..-.+-....+++|++|++++|++..+.. ..+..+.+|..
T Consensus 43 ~~le~ls~~n~gltt~~~--~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~ 120 (260)
T KOG2739|consen 43 VELELLSVINVGLTTLTN--FPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKS 120 (260)
T ss_pred cchhhhhhhccceeeccc--CCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchhh
Confidence 344444444444444332 344555555555555 2221111112334555555555555543211 11233344444
Q ss_pred EECcCCCC
Q psy8029 203 LDISGNNI 210 (693)
Q Consensus 203 L~L~~n~i 210 (693)
|++.+|..
T Consensus 121 Ldl~n~~~ 128 (260)
T KOG2739|consen 121 LDLFNCSV 128 (260)
T ss_pred hhcccCCc
Confidence 44444433
No 67
>KOG2123|consensus
Probab=97.29 E-value=5.1e-06 Score=78.86 Aligned_cols=82 Identities=24% Similarity=0.235 Sum_probs=45.7
Q ss_pred CCCcEEEccCCCCCCCChhhhccCccCceEeccCCcCccccCccCCCCCCeEeCCCCccccccc-cccCCCCCCcEEECC
Q psy8029 321 KKLVKLELQRNKLKYLPENLFESLKELYTLNLKNNQLENITSLVGLSGLNSLDLSWNQLEQINL-IAFDGLSSLNTVDLS 399 (693)
Q Consensus 321 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~l~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~ 399 (693)
.+.++|++.+|.+++|.. ...++.|+.|.|+-|+|+++.....|+.|++|+|..|.|.++.. .-+.++++|+.|.|.
T Consensus 19 ~~vkKLNcwg~~L~DIsi--c~kMp~lEVLsLSvNkIssL~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~ 96 (388)
T KOG2123|consen 19 ENVKKLNCWGCGLDDISI--CEKMPLLEVLSLSVNKISSLAPLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLD 96 (388)
T ss_pred HHhhhhcccCCCccHHHH--HHhcccceeEEeeccccccchhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhc
Confidence 345555555555555443 34556666666666666666555566666666666666555433 223455666666665
Q ss_pred CCcCc
Q psy8029 400 HNLLT 404 (693)
Q Consensus 400 ~n~l~ 404 (693)
.|.-.
T Consensus 97 ENPCc 101 (388)
T KOG2123|consen 97 ENPCC 101 (388)
T ss_pred cCCcc
Confidence 55544
No 68
>smart00082 LRRCT Leucine rich repeat C-terminal domain.
Probab=97.27 E-value=0.00016 Score=51.79 Aligned_cols=48 Identities=19% Similarity=0.402 Sum_probs=32.8
Q ss_pred CcccccCCcHHHHHHHhcccccceeeeeeeccCceeecCCC--CccccccCCCCCcc
Q psy8029 515 NPIACNCSNYDLIRFVSKKMTKTVYQMLELVTDNLECFGNA--GVGINSVRPENLTC 569 (693)
Q Consensus 515 Np~~c~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~--~~~~~~l~~~~l~c 569 (693)
|||.|||++.||..|+... .. ......+.|..|. ...+.++..+++.|
T Consensus 1 NP~~CdC~l~~~~~w~~~~--~~-----~~~~~~~~C~~P~~~~~~l~~~~~~~~~C 50 (51)
T smart00082 1 NPFICDCELRWLLRWLQAN--EH-----LQDPVSLRCASPSSLRGPLLELLHSEFKC 50 (51)
T ss_pred CCccCcCCchHHHHHHHhC--Cc-----cCCCCCCEeCCcHHHHhHHHcCCHhhCCC
Confidence 8999999999999999872 11 1233478999881 14465665555544
No 69
>KOG2739|consensus
Probab=97.26 E-value=0.00016 Score=68.83 Aligned_cols=107 Identities=26% Similarity=0.263 Sum_probs=64.0
Q ss_pred ccCccCceEeccCCcCccccCccCCCCCCeEeCCCC--ccccccccccCCCCCCcEEECCCCcCcccccccCCCCccCCC
Q psy8029 342 ESLKELYTLNLKNNQLENITSLVGLSGLNSLDLSWN--QLEQINLIAFDGLSSLNTVDLSHNLLTFDEYQYGYSPLKQCV 419 (693)
Q Consensus 342 ~~~~~L~~L~Ls~n~l~~l~~~~~l~~L~~L~Ls~n--~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~l~ 419 (693)
.....|+.+.+.+..++++..+..+++|+.|.++.| ++.+-.......+++|++|++++|+|.... ...++..+.
T Consensus 40 d~~~~le~ls~~n~gltt~~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~ls---tl~pl~~l~ 116 (260)
T KOG2739|consen 40 DEFVELELLSVINVGLTTLTNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLS---TLRPLKELE 116 (260)
T ss_pred ccccchhhhhhhccceeecccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccccc---ccchhhhhc
Confidence 344556666666666666666666677777777777 433322222334577777777777776432 244566667
Q ss_pred CCcEEECCCCCCCcCC---hhHHhcCCCCcEEECC
Q psy8029 420 NLETINLSYNRISSLF---DDWISSMTSLKELDLR 451 (693)
Q Consensus 420 ~L~~L~Ls~n~l~~~~---~~~~~~l~~L~~L~L~ 451 (693)
+|..|++.+|..+..- ...|.-+++|+.||-.
T Consensus 117 nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~ 151 (260)
T KOG2739|consen 117 NLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDGC 151 (260)
T ss_pred chhhhhcccCCccccccHHHHHHHHhhhhcccccc
Confidence 7777777777655532 2345566666666544
No 70
>KOG2123|consensus
Probab=97.20 E-value=1.7e-05 Score=75.49 Aligned_cols=80 Identities=34% Similarity=0.373 Sum_probs=37.0
Q ss_pred ccccEEEccCCcCcccccccccCCCCCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccCh-hhhCCCCCCCEE
Q psy8029 101 HFVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDP-EIFKNLTSLRIL 179 (693)
Q Consensus 101 ~~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L 179 (693)
.+.+.|++-+| ++++|.. ...++.|++|.|+-|+|+.+.+ |..|++|++|+|..|.|.++.. ..+.++++|+.|
T Consensus 19 ~~vkKLNcwg~-~L~DIsi--c~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 19 ENVKKLNCWGC-GLDDISI--CEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHhhhhcccCC-CccHHHH--HHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhH
Confidence 34444444444 4444433 3344455555555555544433 4445555555555554444322 223444555555
Q ss_pred EccCCC
Q psy8029 180 NLDHNQ 185 (693)
Q Consensus 180 ~L~~n~ 185 (693)
-|..|.
T Consensus 94 WL~ENP 99 (388)
T KOG2123|consen 94 WLDENP 99 (388)
T ss_pred hhccCC
Confidence 554443
No 71
>KOG1947|consensus
Probab=96.65 E-value=0.00026 Score=77.91 Aligned_cols=237 Identities=22% Similarity=0.211 Sum_probs=104.8
Q ss_pred CcccccEEEccCCcCccccc-ccccCCCCCCcEEEeeCC--cccccC---cccCCCCCCCcEEEcCCCC-CCccChhhhC
Q psy8029 99 GLHFVKHILLSHNKEITGLH-KDIFKGTPQLESLNLRGN--SITELY---SGVFQYVPKLQVLDLGSND-VAYMDPEIFK 171 (693)
Q Consensus 99 ~l~~L~~L~Ls~n~~i~~~~-~~~~~~l~~L~~L~L~~n--~i~~~~---~~~~~~l~~L~~L~Ls~n~-l~~~~~~~~~ 171 (693)
.++.|+.|.+..+..+.... ......+++|+.|+++++ .+...+ ......+.+|+.|+++++. ++...-..+.
T Consensus 186 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~ 265 (482)
T KOG1947|consen 186 SCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALA 265 (482)
T ss_pred hCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHH
Confidence 35666666666664454422 122445666666666652 111111 1123345666666666665 4444333333
Q ss_pred C-CCCCCEEEccCCC-CCCCCh-hhcCCCCCCcEEECcCCCCCc---CCCCcCCCCCCCcEEEcCCCccccCChhhhhcc
Q psy8029 172 N-LTSLRILNLDHNQ-LINLTR-AIFNNVPNLRSLDISGNNISI---LPSGVFSDLRKLQTFYANSNRFQMFPKDLFAEM 245 (693)
Q Consensus 172 ~-l~~L~~L~L~~n~-l~~~~~-~~~~~l~~L~~L~L~~n~i~~---~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 245 (693)
. +++|++|.+.++. +++..- .....++.|++|+++++.... +... ..++++++.|.+.... .+
T Consensus 266 ~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~-~~~c~~l~~l~~~~~~----------~c 334 (482)
T KOG1947|consen 266 SRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEAL-LKNCPNLRELKLLSLN----------GC 334 (482)
T ss_pred hhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHH-HHhCcchhhhhhhhcC----------CC
Confidence 2 5666666655554 332221 122345566666666554320 1111 2234444443332211 02
Q ss_pred cCceEEEEecCCCcc-cccCccccCCCCCccEEEcCCCCCcccC-cccccCCCCccEEEecCCCCCCcCChhhhcCCCCC
Q psy8029 246 KYLQVIKISYHKDSL-KELPSGLFANLPLLNTVILGESSIAELP-SDLFWNSTNITNIVLTGHKKLTSLPSTLFRDCKKL 323 (693)
Q Consensus 246 ~~L~~L~l~~n~~~~-~~i~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~~~~L~~L~l~~n~~l~~l~~~~~~~~~~L 323 (693)
..++.+.+....... ..+.......+++++.+.+..+...... .....+|+.|. ..+... ......+
T Consensus 335 ~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l~-~~l~~~----------~~~~~~l 403 (482)
T KOG1947|consen 335 PSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNLT-ESLELR----------LCRSDSL 403 (482)
T ss_pred ccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCcccc-hHHHHH----------hccCCcc
Confidence 223333222221101 1222333456667777777666533333 23333444441 111111 1122237
Q ss_pred cEEEccCCCCCCCCh-hhhcc-CccCceEeccCCcC
Q psy8029 324 VKLELQRNKLKYLPE-NLFES-LKELYTLNLKNNQL 357 (693)
Q Consensus 324 ~~L~l~~n~l~~~~~-~~~~~-~~~L~~L~Ls~n~l 357 (693)
+.|+++.+....... ..... +..++.+++.++..
T Consensus 404 ~~L~l~~~~~~t~~~l~~~~~~~~~~~~l~~~~~~~ 439 (482)
T KOG1947|consen 404 RVLNLSDCRLVTDKGLRCLADSCSNLKDLDLSGCRV 439 (482)
T ss_pred ceEecccCccccccchHHHhhhhhccccCCccCccc
Confidence 888888875432221 11111 55566666666543
No 72
>KOG1947|consensus
Probab=96.51 E-value=0.00063 Score=74.91 Aligned_cols=238 Identities=20% Similarity=0.198 Sum_probs=116.7
Q ss_pred CCCCCcEEEcCCC-CCCccC-hhhhCCCCCCCEEEccCC--CCCCCC---hhhcCCCCCCcEEECcCCC-CCcCCCCcCC
Q psy8029 148 YVPKLQVLDLGSN-DVAYMD-PEIFKNLTSLRILNLDHN--QLINLT---RAIFNNVPNLRSLDISGNN-ISILPSGVFS 219 (693)
Q Consensus 148 ~l~~L~~L~Ls~n-~l~~~~-~~~~~~l~~L~~L~L~~n--~l~~~~---~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~ 219 (693)
.++.|+.|.+..+ .+.... ......+++|+.|+++++ .+.... ......+++|+.|+++.+. ++...-..+.
T Consensus 186 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~ 265 (482)
T KOG1947|consen 186 SCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALA 265 (482)
T ss_pred hCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHH
Confidence 3567777777666 333321 223456777777777762 111111 1223455677777777766 4433322222
Q ss_pred -CCCCCcEEEcCCCc-cccCC-hhhhhcccCceEEEEecCCCcccc-cCccccCCCCCccEEEcCCCCCcccCcccccCC
Q psy8029 220 -DLRKLQTFYANSNR-FQMFP-KDLFAEMKYLQVIKISYHKDSLKE-LPSGLFANLPLLNTVILGESSIAELPSDLFWNS 295 (693)
Q Consensus 220 -~l~~L~~L~l~~n~-l~~~~-~~~~~~~~~L~~L~l~~n~~~~~~-i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 295 (693)
.+++|+.|.+.++. ++.-. ......++.|++|+++++...... +... ..++++++.+.+.... ++
T Consensus 266 ~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~-~~~c~~l~~l~~~~~~----------~c 334 (482)
T KOG1947|consen 266 SRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEAL-LKNCPNLRELKLLSLN----------GC 334 (482)
T ss_pred hhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHH-HHhCcchhhhhhhhcC----------CC
Confidence 26677777766665 44221 122345667777777766532111 1111 2335555554433221 13
Q ss_pred CCccEEEecCCCCCC--cCChhhhcCCCCCcEEEccCCCCCCCC-hhhhccCccCceEeccCCcCccccCccCCCCCCeE
Q psy8029 296 TNITNIVLTGHKKLT--SLPSTLFRDCKKLVKLELQRNKLKYLP-ENLFESLKELYTLNLKNNQLENITSLVGLSGLNSL 372 (693)
Q Consensus 296 ~~L~~L~l~~n~~l~--~l~~~~~~~~~~L~~L~l~~n~l~~~~-~~~~~~~~~L~~L~Ls~n~l~~l~~~~~l~~L~~L 372 (693)
..++.+.+.+..... .+.......+++++.+.+..+...... ...+.+++.|. ..+.... ....+++.|
T Consensus 335 ~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l~-~~l~~~~-------~~~~~l~~L 406 (482)
T KOG1947|consen 335 PSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNLT-ESLELRL-------CRSDSLRVL 406 (482)
T ss_pred ccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCcccc-hHHHHHh-------ccCCccceE
Confidence 344444444432222 233334566777777777777644433 23445566552 2211110 112226777
Q ss_pred eCCCCccccccc-cccCC-CCCCcEEECCCCcCc
Q psy8029 373 DLSWNQLEQINL-IAFDG-LSSLNTVDLSHNLLT 404 (693)
Q Consensus 373 ~Ls~n~l~~~~~-~~~~~-l~~L~~L~L~~n~l~ 404 (693)
+++.+....... ..... +..++.+++.++...
T Consensus 407 ~l~~~~~~t~~~l~~~~~~~~~~~~l~~~~~~~~ 440 (482)
T KOG1947|consen 407 NLSDCRLVTDKGLRCLADSCSNLKDLDLSGCRVI 440 (482)
T ss_pred ecccCccccccchHHHhhhhhccccCCccCcccc
Confidence 777776443221 11111 556677777766544
No 73
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.12 E-value=0.012 Score=30.99 Aligned_cols=16 Identities=31% Similarity=0.468 Sum_probs=7.3
Q ss_pred cCcEEEccCCcccccc
Q psy8029 639 LITDLDLSYNNISHVD 654 (693)
Q Consensus 639 ~L~~L~Ls~N~l~~i~ 654 (693)
+|+.|+|++|+|+++|
T Consensus 2 ~L~~L~l~~n~L~~lP 17 (17)
T PF13504_consen 2 NLRTLDLSNNRLTSLP 17 (17)
T ss_dssp T-SEEEETSS--SSE-
T ss_pred ccCEEECCCCCCCCCc
Confidence 4566666666666554
No 74
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=94.84 E-value=0.015 Score=33.00 Aligned_cols=17 Identities=47% Similarity=0.683 Sum_probs=7.6
Q ss_pred CcEEEeeCCcccccCcc
Q psy8029 128 LESLNLRGNSITELYSG 144 (693)
Q Consensus 128 L~~L~L~~n~i~~~~~~ 144 (693)
|++|++++|+++.+|+.
T Consensus 2 L~~Ldls~n~l~~ip~~ 18 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPSS 18 (22)
T ss_dssp ESEEEETSSEESEEGTT
T ss_pred ccEEECCCCcCEeCChh
Confidence 44444444444444443
No 75
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=93.94 E-value=0.034 Score=31.55 Aligned_cols=21 Identities=24% Similarity=0.343 Sum_probs=15.9
Q ss_pred cccEEEccCCcCcccccccccCC
Q psy8029 102 FVKHILLSHNKEITGLHKDIFKG 124 (693)
Q Consensus 102 ~L~~L~Ls~n~~i~~~~~~~~~~ 124 (693)
+|++||+++| .++.+|+. |++
T Consensus 1 ~L~~Ldls~n-~l~~ip~~-~~~ 21 (22)
T PF00560_consen 1 NLEYLDLSGN-NLTSIPSS-FSN 21 (22)
T ss_dssp TESEEEETSS-EESEEGTT-TTT
T ss_pred CccEEECCCC-cCEeCChh-hcC
Confidence 4788888888 88877776 654
No 76
>KOG4308|consensus
Probab=93.12 E-value=0.00085 Score=72.18 Aligned_cols=85 Identities=19% Similarity=0.271 Sum_probs=43.8
Q ss_pred CCCCCEEEccCCCCCCCC----hhhcCCCCC-CcEEECcCCCCCcCC----CCcCCCC-CCCcEEEcCCCccccCCh---
Q psy8029 173 LTSLRILNLDHNQLINLT----RAIFNNVPN-LRSLDISGNNISILP----SGVFSDL-RKLQTFYANSNRFQMFPK--- 239 (693)
Q Consensus 173 l~~L~~L~L~~n~l~~~~----~~~~~~l~~-L~~L~L~~n~i~~~~----~~~~~~l-~~L~~L~l~~n~l~~~~~--- 239 (693)
..++++|++.++.++... ...+...+. +..+++..|.+.... ...+..+ ..++.++++.|.++.-..
T Consensus 203 ~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L 282 (478)
T KOG4308|consen 203 LSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDL 282 (478)
T ss_pred cccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHH
Confidence 455666666666555221 122333344 555666666555321 1112333 556677777777663222
Q ss_pred -hhhhcccCceEEEEecCC
Q psy8029 240 -DLFAEMKYLQVIKISYHK 257 (693)
Q Consensus 240 -~~~~~~~~L~~L~l~~n~ 257 (693)
.....++.++++.++.|.
T Consensus 283 ~~~l~~~~~l~~l~l~~n~ 301 (478)
T KOG4308|consen 283 AEVLVSCRQLEELSLSNNP 301 (478)
T ss_pred HHHHhhhHHHHHhhcccCc
Confidence 223455677777777776
No 77
>PF01462 LRRNT: Leucine rich repeat N-terminal domain; InterPro: IPR000372 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. LRRs are often flanked by cysteine-rich domains: an N-terminal LRR domain and a C-terminal LRR domain (IPR000483 from INTERPRO). This entry represents the N-terminal LRR domain. ; PDB: 3E6J_A 1W8A_A 2V9S_C 2V9T_B 3TWI_D 3ZYN_A 3ZYO_A 1OOK_G 1QYY_G 1SQ0_B ....
Probab=93.04 E-value=0.064 Score=32.50 Aligned_cols=28 Identities=43% Similarity=0.992 Sum_probs=21.4
Q ss_pred CCCCCcEeeecCCCceEEEEcCCCCcccCCCCCC
Q psy8029 573 PCPARCYCNFSPYYSIMSVNCSSASLTHMPDYLP 606 (693)
Q Consensus 573 ~cp~~~~~~~~~~~~l~~l~ls~n~l~~ip~~~~ 606 (693)
+||..|.|. ...++|++.+|+++|..++
T Consensus 1 ~CP~~C~C~------~~~V~C~~~~L~~vP~~lP 28 (28)
T PF01462_consen 1 ACPRPCTCS------GLTVDCSGRGLTAVPSDLP 28 (28)
T ss_dssp SSETTSEEE------TTEEEETTSS-SSS-STS-
T ss_pred CcCCCCEec------CCEeECCCCCCCccCCCCc
Confidence 389999999 4678999999999998653
No 78
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=92.70 E-value=0.076 Score=31.50 Aligned_cols=20 Identities=35% Similarity=0.654 Sum_probs=8.8
Q ss_pred CCcEEEeeCCcccccCcccC
Q psy8029 127 QLESLNLRGNSITELYSGVF 146 (693)
Q Consensus 127 ~L~~L~L~~n~i~~~~~~~~ 146 (693)
+|++|+|++|+|+.+|.++|
T Consensus 3 ~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00369 3 NLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCEEECCCCcCCcCCHHHc
Confidence 34444444444444444433
No 79
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=92.70 E-value=0.076 Score=31.50 Aligned_cols=20 Identities=35% Similarity=0.654 Sum_probs=8.8
Q ss_pred CCcEEEeeCCcccccCcccC
Q psy8029 127 QLESLNLRGNSITELYSGVF 146 (693)
Q Consensus 127 ~L~~L~L~~n~i~~~~~~~~ 146 (693)
+|++|+|++|+|+.+|.++|
T Consensus 3 ~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00370 3 NLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCEEECCCCcCCcCCHHHc
Confidence 34444444444444444433
No 80
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=92.13 E-value=0.096 Score=27.52 Aligned_cols=11 Identities=36% Similarity=0.688 Sum_probs=3.2
Q ss_pred CcEEEeeCCcc
Q psy8029 128 LESLNLRGNSI 138 (693)
Q Consensus 128 L~~L~L~~n~i 138 (693)
|+.|++++|++
T Consensus 3 L~~L~l~~n~L 13 (17)
T PF13504_consen 3 LRTLDLSNNRL 13 (17)
T ss_dssp -SEEEETSS--
T ss_pred cCEEECCCCCC
Confidence 33344443333
No 81
>KOG3864|consensus
Probab=92.08 E-value=0.03 Score=51.51 Aligned_cols=83 Identities=18% Similarity=0.134 Sum_probs=58.3
Q ss_pred CCCeEeCCCCccccccccccCCCCCCcEEECCCCcCcccccccCCCCccCCCCCcEEECCCC-CCCcCChhHHhcCCCCc
Q psy8029 368 GLNSLDLSWNQLEQINLIAFDGLSSLNTVDLSHNLLTFDEYQYGYSPLKQCVNLETINLSYN-RISSLFDDWISSMTSLK 446 (693)
Q Consensus 368 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~n-~l~~~~~~~~~~l~~L~ 446 (693)
.++.+|-++..|..+.-..+.+++.++.|.+.+|.--+........ .-.++|+.|+|++| +||+-.-.++..+++|+
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~--~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr 179 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLG--GLAPSLQDLDLSGCPRITDGGLACLLKLKNLR 179 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhc--ccccchheeeccCCCeechhHHHHHHHhhhhH
Confidence 4677888888888877777888888888888877544321100011 13568888888888 68877777777888888
Q ss_pred EEECCC
Q psy8029 447 ELDLRH 452 (693)
Q Consensus 447 ~L~L~~ 452 (693)
.|.+.+
T Consensus 180 ~L~l~~ 185 (221)
T KOG3864|consen 180 RLHLYD 185 (221)
T ss_pred HHHhcC
Confidence 887764
No 82
>KOG3864|consensus
Probab=91.46 E-value=0.026 Score=51.97 Aligned_cols=90 Identities=19% Similarity=0.143 Sum_probs=59.5
Q ss_pred CCCCCCC--CccEEEEEcCCCCCccHHHHhhhcCcccccEEEeecCCCCccCCCCccC-CCcccccEEEccCCcCccccc
Q psy8029 42 LPEQNLG--PFNAVTFTFCPLPDENFISLFSKLNITTINTLAFSNSPSNVGVLSPPYF-DGLHFVKHILLSHNKEITGLH 118 (693)
Q Consensus 42 l~~~~~~--~l~~L~l~~c~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~l~~~~~-~~l~~L~~L~Ls~n~~i~~~~ 118 (693)
+|....+ .++.++-++|.+..+++..+ .+++.++.|.+.+| ..+.+.--..+ +-.++|+.|++++|..|++-.
T Consensus 93 lp~~~~~~~~IeaVDAsds~I~~eGle~L---~~l~~i~~l~l~~c-k~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~G 168 (221)
T KOG3864|consen 93 LPGPNADNVKIEAVDASDSSIMYEGLEHL---RDLRSIKSLSLANC-KYFDDWCLERLGGLAPSLQDLDLSGCPRITDGG 168 (221)
T ss_pred CCCCCCCcceEEEEecCCchHHHHHHHHH---hccchhhhheeccc-cchhhHHHHHhcccccchheeeccCCCeechhH
Confidence 4444444 45777778888866665554 46778888888877 33331111111 135788899999888888877
Q ss_pred ccccCCCCCCcEEEeeC
Q psy8029 119 KDIFKGTPQLESLNLRG 135 (693)
Q Consensus 119 ~~~~~~l~~L~~L~L~~ 135 (693)
...+..+++|+.|.+.+
T Consensus 169 L~~L~~lknLr~L~l~~ 185 (221)
T KOG3864|consen 169 LACLLKLKNLRRLHLYD 185 (221)
T ss_pred HHHHHHhhhhHHHHhcC
Confidence 77777788888887764
No 83
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=91.31 E-value=0.22 Score=29.50 Aligned_cols=21 Identities=38% Similarity=0.743 Sum_probs=10.7
Q ss_pred CCCcEEEcCCCCCCccChhhh
Q psy8029 150 PKLQVLDLGSNDVAYMDPEIF 170 (693)
Q Consensus 150 ~~L~~L~Ls~n~l~~~~~~~~ 170 (693)
++|++|+|++|.++.+++.+|
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHc
Confidence 345555555555555554444
No 84
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=91.31 E-value=0.22 Score=29.50 Aligned_cols=21 Identities=38% Similarity=0.743 Sum_probs=10.7
Q ss_pred CCCcEEEcCCCCCCccChhhh
Q psy8029 150 PKLQVLDLGSNDVAYMDPEIF 170 (693)
Q Consensus 150 ~~L~~L~Ls~n~l~~~~~~~~ 170 (693)
++|++|+|++|.++.+++.+|
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHc
Confidence 345555555555555554444
No 85
>KOG4308|consensus
Probab=91.23 E-value=0.0049 Score=66.41 Aligned_cols=185 Identities=22% Similarity=0.251 Sum_probs=131.8
Q ss_pred CccEEEEEcCCCCCccHHHHhhhc-CcccccEEEeecCCCCccCCCC----ccCCCc-ccccEEEccCCcCcccccc---
Q psy8029 49 PFNAVTFTFCPLPDENFISLFSKL-NITTINTLAFSNSPSNVGVLSP----PYFDGL-HFVKHILLSHNKEITGLHK--- 119 (693)
Q Consensus 49 ~l~~L~l~~c~l~~~~~~~~~~~~-~~~~L~~L~l~~~~~~i~~l~~----~~~~~l-~~L~~L~Ls~n~~i~~~~~--- 119 (693)
.+..+.+.+|.+.+.+...+...+ ...+|+.|+++++ .+..-.. ..+... ..+++|++..| .++....
T Consensus 88 ~l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n--~l~~~g~~~l~~~l~~~~~~l~~L~l~~c-~l~~~g~~~l 164 (478)
T KOG4308|consen 88 SLLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGN--NLGDEGARLLCEGLRLPQCLLQTLELVSC-SLTSEGAAPL 164 (478)
T ss_pred hHHHhhhhhCccccchHHHHHHHhcccccHhHhhcccC--CCccHhHHHHHhhcccchHHHHHHHhhcc-cccccchHHH
Confidence 378899999999999888887665 4778999999998 7762221 223333 56788888888 7776432
Q ss_pred -cccCCCCCCcEEEeeCCcccc-----cC---cccCCCCCCCcEEEcCCCCCCccC----hhhhCCCCC-CCEEEccCCC
Q psy8029 120 -DIFKGTPQLESLNLRGNSITE-----LY---SGVFQYVPKLQVLDLGSNDVAYMD----PEIFKNLTS-LRILNLDHNQ 185 (693)
Q Consensus 120 -~~~~~l~~L~~L~L~~n~i~~-----~~---~~~~~~l~~L~~L~Ls~n~l~~~~----~~~~~~l~~-L~~L~L~~n~ 185 (693)
..+.....++.++++.|.+.. ++ ...+....++++|.+++|.++... ...+...+. ++.+++..|+
T Consensus 165 ~~~L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~ 244 (478)
T KOG4308|consen 165 AAVLEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNK 244 (478)
T ss_pred HHHHhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcC
Confidence 334558899999999998743 11 112335778999999999877322 234455566 7889999999
Q ss_pred CCCCCh----hhcCCC-CCCcEEECcCCCCCcCCC----CcCCCCCCCcEEEcCCCcccc
Q psy8029 186 LINLTR----AIFNNV-PNLRSLDISGNNISILPS----GVFSDLRKLQTFYANSNRFQM 236 (693)
Q Consensus 186 l~~~~~----~~~~~l-~~L~~L~L~~n~i~~~~~----~~~~~l~~L~~L~l~~n~l~~ 236 (693)
+.+... ..+..+ ..+++++++.|.|+.-.. ..+..++.++.+.++.|.+..
T Consensus 245 l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 245 LGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred cchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 885422 334555 678999999999985443 234567899999999998874
No 86
>smart00013 LRRNT Leucine rich repeat N-terminal domain.
Probab=90.78 E-value=0.26 Score=31.24 Aligned_cols=29 Identities=45% Similarity=0.893 Sum_probs=24.9
Q ss_pred CCCCcEeeecCCCceEEEEcCCCCcccCCCCCCCC
Q psy8029 574 CPARCYCNFSPYYSIMSVNCSSASLTHMPDYLPVT 608 (693)
Q Consensus 574 cp~~~~~~~~~~~~l~~l~ls~n~l~~ip~~~~~l 608 (693)
||..|.|. ...++|++.+|+++|..++..
T Consensus 2 CP~~C~C~------~~~V~C~~~~L~~vP~~iP~~ 30 (33)
T smart00013 2 CPAPCNCS------GTAVDCSGRGLTEVPLDLPPD 30 (33)
T ss_pred cCCCCEEC------CCEeEeCCCCcCccCCCCCcc
Confidence 89999998 357999999999999987653
No 87
>KOG0473|consensus
Probab=85.49 E-value=0.017 Score=54.04 Aligned_cols=84 Identities=15% Similarity=0.224 Sum_probs=36.5
Q ss_pred CCCCCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEEccCCCCCCCChhhcCCCCCCcE
Q psy8029 123 KGTPQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILNLDHNQLINLTRAIFNNVPNLRS 202 (693)
Q Consensus 123 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 202 (693)
....+.+.||++.|++..+... |+.++.|+.|+++.|.+...+.+ +.....++.+++..|..+..+. .++..+++++
T Consensus 39 ~~~kr~tvld~~s~r~vn~~~n-~s~~t~~~rl~~sknq~~~~~~d-~~q~~e~~~~~~~~n~~~~~p~-s~~k~~~~k~ 115 (326)
T KOG0473|consen 39 ASFKRVTVLDLSSNRLVNLGKN-FSILTRLVRLDLSKNQIKFLPKD-AKQQRETVNAASHKNNHSQQPK-SQKKEPHPKK 115 (326)
T ss_pred hccceeeeehhhhhHHHhhccc-hHHHHHHHHHhccHhhHhhChhh-HHHHHHHHHHHhhccchhhCCc-cccccCCcch
Confidence 3334444455554444443332 34444455555554444433322 3444444444444444443332 2344444444
Q ss_pred EECcCCC
Q psy8029 203 LDISGNN 209 (693)
Q Consensus 203 L~L~~n~ 209 (693)
+++..+.
T Consensus 116 ~e~k~~~ 122 (326)
T KOG0473|consen 116 NEQKKTE 122 (326)
T ss_pred hhhccCc
Confidence 4444443
No 88
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=84.50 E-value=0.59 Score=27.53 Aligned_cols=17 Identities=18% Similarity=0.431 Sum_probs=12.0
Q ss_pred cCcEEEccCCccccccC
Q psy8029 639 LITDLDLSYNNISHVDT 655 (693)
Q Consensus 639 ~L~~L~Ls~N~l~~i~~ 655 (693)
+|+.|+.++|+|+++|.
T Consensus 3 ~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 3 SLKELNVSNNQLTSLPE 19 (26)
T ss_pred ccceeecCCCccccCcc
Confidence 46677777777777765
No 89
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=83.95 E-value=0.39 Score=27.72 Aligned_cols=16 Identities=50% Similarity=0.634 Sum_probs=6.9
Q ss_pred CCCcEEECCCCCCCcC
Q psy8029 419 VNLETINLSYNRISSL 434 (693)
Q Consensus 419 ~~L~~L~Ls~n~l~~~ 434 (693)
++|++|+|++|.|++.
T Consensus 2 ~~L~~L~l~~n~i~~~ 17 (24)
T PF13516_consen 2 PNLETLDLSNNQITDE 17 (24)
T ss_dssp TT-SEEE-TSSBEHHH
T ss_pred CCCCEEEccCCcCCHH
Confidence 4455555555554443
No 90
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=83.94 E-value=0.81 Score=27.11 Aligned_cols=16 Identities=38% Similarity=0.586 Sum_probs=9.2
Q ss_pred ccCcEEEccCCccccc
Q psy8029 638 KLITDLDLSYNNISHV 653 (693)
Q Consensus 638 ~~L~~L~Ls~N~l~~i 653 (693)
++|+.|+|++|+|+.|
T Consensus 2 ~~L~~L~L~~NkI~~I 17 (26)
T smart00365 2 TNLEELDLSQNKIKKI 17 (26)
T ss_pred CccCEEECCCCcccee
Confidence 4556666666666544
No 91
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=83.06 E-value=0.61 Score=27.47 Aligned_cols=19 Identities=16% Similarity=0.170 Sum_probs=17.0
Q ss_pred CCCccEEEeeCCceeEecC
Q psy8029 657 YPYLNHLELIDSEKIICHG 675 (693)
Q Consensus 657 ~~~L~~L~l~~N~l~~~~~ 675 (693)
+.+|+.|++++|++++++.
T Consensus 1 P~~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 1 PPSLKELNVSNNQLTSLPE 19 (26)
T ss_pred CcccceeecCCCccccCcc
Confidence 4689999999999999886
No 92
>KOG0473|consensus
Probab=83.03 E-value=0.039 Score=51.76 Aligned_cols=81 Identities=19% Similarity=0.085 Sum_probs=35.3
Q ss_pred ccccEEEccCCcCcccccccccCCCCCCcEEEeeCCcccccCcccCCCCCCCcEEEcCCCCCCccChhhhCCCCCCCEEE
Q psy8029 101 HFVKHILLSHNKEITGLHKDIFKGTPQLESLNLRGNSITELYSGVFQYVPKLQVLDLGSNDVAYMDPEIFKNLTSLRILN 180 (693)
Q Consensus 101 ~~L~~L~Ls~n~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 180 (693)
...+.||++.| .+...... |+-++.|..|+++.|.+..+|.+ |.....++.+++..|..+..+. .+...+++++++
T Consensus 42 kr~tvld~~s~-r~vn~~~n-~s~~t~~~rl~~sknq~~~~~~d-~~q~~e~~~~~~~~n~~~~~p~-s~~k~~~~k~~e 117 (326)
T KOG0473|consen 42 KRVTVLDLSSN-RLVNLGKN-FSILTRLVRLDLSKNQIKFLPKD-AKQQRETVNAASHKNNHSQQPK-SQKKEPHPKKNE 117 (326)
T ss_pred ceeeeehhhhh-HHHhhccc-hHHHHHHHHHhccHhhHhhChhh-HHHHHHHHHHHhhccchhhCCc-cccccCCcchhh
Confidence 34444444444 33333322 33344444444444444444433 3444444444444444433322 244455555555
Q ss_pred ccCCC
Q psy8029 181 LDHNQ 185 (693)
Q Consensus 181 L~~n~ 185 (693)
+-++.
T Consensus 118 ~k~~~ 122 (326)
T KOG0473|consen 118 QKKTE 122 (326)
T ss_pred hccCc
Confidence 54444
No 93
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=79.11 E-value=1.6 Score=25.90 Aligned_cols=19 Identities=16% Similarity=0.165 Sum_probs=16.2
Q ss_pred CCCccEEEeeCCceeEecC
Q psy8029 657 YPYLNHLELIDSEKIICHG 675 (693)
Q Consensus 657 ~~~L~~L~l~~N~l~~~~~ 675 (693)
++.|+.|++++|.|..+..
T Consensus 1 L~~L~~L~L~~NkI~~IEn 19 (26)
T smart00365 1 LTNLEELDLSQNKIKKIEN 19 (26)
T ss_pred CCccCEEECCCCccceecC
Confidence 3689999999999988764
No 94
>KOG3763|consensus
Probab=63.65 E-value=4.4 Score=43.54 Aligned_cols=11 Identities=27% Similarity=0.640 Sum_probs=8.0
Q ss_pred CcEEEcCCCcc
Q psy8029 507 ANIVILNDNPI 517 (693)
Q Consensus 507 l~~l~l~~Np~ 517 (693)
++++-+.|||+
T Consensus 272 Leel~l~GNPl 282 (585)
T KOG3763|consen 272 LEELVLEGNPL 282 (585)
T ss_pred HHHeeecCCcc
Confidence 56777777876
No 95
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=62.50 E-value=3 Score=24.58 Aligned_cols=17 Identities=24% Similarity=0.145 Sum_probs=9.9
Q ss_pred ccccEEEccCCcCcccc
Q psy8029 101 HFVKHILLSHNKEITGL 117 (693)
Q Consensus 101 ~~L~~L~Ls~n~~i~~~ 117 (693)
++|++|++++|..|++.
T Consensus 2 ~~L~~L~l~~C~~itD~ 18 (26)
T smart00367 2 PNLRELDLSGCTNITDE 18 (26)
T ss_pred CCCCEeCCCCCCCcCHH
Confidence 55666666666545543
No 96
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=60.05 E-value=6.7 Score=23.62 Aligned_cols=13 Identities=38% Similarity=0.629 Sum_probs=8.0
Q ss_pred cCcEEEccCCccc
Q psy8029 639 LITDLDLSYNNIS 651 (693)
Q Consensus 639 ~L~~L~Ls~N~l~ 651 (693)
+|+.|||++|.+.
T Consensus 3 ~L~~LdL~~N~i~ 15 (28)
T smart00368 3 SLRELDLSNNKLG 15 (28)
T ss_pred ccCEEECCCCCCC
Confidence 4666666666664
No 97
>KOG3763|consensus
Probab=54.26 E-value=6.4 Score=42.35 Aligned_cols=62 Identities=27% Similarity=0.313 Sum_probs=27.4
Q ss_pred CCCCCcEEEccCCCCCCCCh--hhhccCccCceEeccCC--cCccccCc--cCCCCCCeEeCCCCccc
Q psy8029 319 DCKKLVKLELQRNKLKYLPE--NLFESLKELYTLNLKNN--QLENITSL--VGLSGLNSLDLSWNQLE 380 (693)
Q Consensus 319 ~~~~L~~L~l~~n~l~~~~~--~~~~~~~~L~~L~Ls~n--~l~~l~~~--~~l~~L~~L~Ls~n~l~ 380 (693)
+.+.+..+.+++|++..+.. ..-...++|+.|+|++| .+...+.. .+...|++|.+.+|.+.
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLC 283 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCccc
Confidence 34455555666665543321 11133455555555555 33322222 22223555555555543
No 98
>KOG4242|consensus
Probab=50.46 E-value=79 Score=33.74 Aligned_cols=14 Identities=29% Similarity=0.432 Sum_probs=8.3
Q ss_pred CCCcEEEeeCCccc
Q psy8029 126 PQLESLNLRGNSIT 139 (693)
Q Consensus 126 ~~L~~L~L~~n~i~ 139 (693)
+.+++++++.|.+.
T Consensus 165 pr~r~~dls~npi~ 178 (553)
T KOG4242|consen 165 PRARQHDLSPNPIG 178 (553)
T ss_pred chhhhhccCCCccc
Confidence 44566666666554
No 99
>PF01463 LRRCT: Leucine rich repeat C-terminal domain; InterPro: IPR000483 Leucine-rich repeats (LRR, see IPR001611 from INTERPRO) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions []. Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response. LRRs are often flanked by cysteine-rich domains: an N-terminal LRR domain (IPR000372 from INTERPRO) and a C-terminal LRR domain. This entry represents the C-terminal LRR domain. ; PDB: 3RFE_B 3REZ_D 2WFH_A 2V70_B 2V9S_C 2V9T_B 1W8A_A.
Probab=50.27 E-value=7 Score=22.83 Aligned_cols=20 Identities=20% Similarity=0.619 Sum_probs=13.5
Q ss_pred eeecCC---CCccccccCCCCCcc
Q psy8029 549 LECFGN---AGVGINSVRPENLTC 569 (693)
Q Consensus 549 ~~c~~~---~~~~~~~l~~~~l~c 569 (693)
.+|..| +| .+.++...+|.|
T Consensus 2 ~~Ca~P~~lrg-~l~~~~~~~f~C 24 (25)
T PF01463_consen 2 ARCASPPELRG-PLLDLPPSDFKC 24 (25)
T ss_dssp -BEEESGGGTT-BGGGSSGGG---
T ss_pred CccCCChHHcC-cHhhCCcccCcC
Confidence 468888 88 999998877776
No 100
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=39.92 E-value=14 Score=47.87 Aligned_cols=32 Identities=25% Similarity=0.246 Sum_probs=28.0
Q ss_pred EecCCccccCCCCCCcccccCcEEEccCCccc
Q psy8029 620 ILHNNSINHFLESPPESYKLITDLDLSYNNIS 651 (693)
Q Consensus 620 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 651 (693)
||++|+|+.+++..|..+.+|+.|+|++|.+.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 57889999888888888888999999999887
Done!