BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8036
(194 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VCM4|LIPT_MOUSE Lipoyltransferase 1, mitochondrial OS=Mus musculus GN=Lipt1 PE=2
SV=1
Length = 373
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 18/143 (12%)
Query: 2 RIATGASMK----GIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMED 57
R A +S+K GI SNAT S P+ NL E ++ + L+ ++ EY +
Sbjct: 186 RTALSSSLKSPYCGIKSNATPSIPSAVKNLLERDSTLTCEVLMSAVAAEYAAHHQV---- 241
Query: 58 GGEGQIAKQRGFQTINPTDD-WFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGA 116
+G + INP D+ FPG+ + E QSWEW YG TPKFT+ +F +P E A
Sbjct: 242 --DGHV------NLINPADETMFPGINRKVKELQSWEWVYGRTPKFTVDTTFHVPYEQ-A 292
Query: 117 PGQLVISLEIVKGLIESVCFKIP 139
++ + +++ G IE+ K P
Sbjct: 293 HLEIQVFMDVKNGRIETCAIKAP 315
>sp|O46419|LIPT_BOVIN Lipoyltransferase 1, mitochondrial OS=Bos taurus GN=LIPT1 PE=1 SV=1
Length = 373
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 14/131 (10%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
+GI SNATASTPA NL E P ++ + +I ++ EY + I
Sbjct: 198 QGIRSNATASTPALVKNLMEKDPTLTCEVVINAVATEYATSHQI------------DNHI 245
Query: 70 QTINPTDD-WFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIVK 128
INPTD+ FPG+ E Q+WEW YG TPKF++ SF + E + ++ + +++
Sbjct: 246 HLINPTDETVFPGINSKAIELQTWEWIYGKTPKFSVDTSFTVLHEQ-SHVEIKVFIDVKN 304
Query: 129 GLIESVCFKIP 139
G IE + P
Sbjct: 305 GRIEVCNIEAP 315
>sp|Q9Y234|LIPT_HUMAN Lipoyltransferase 1, mitochondrial OS=Homo sapiens GN=LIPT1 PE=1
SV=1
Length = 373
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 19/162 (11%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
+GI SNATAS P+ NL E P ++ + L+ ++ EY I
Sbjct: 198 QGIRSNATASIPSLVKNLLEKDPTLTCEVLMNAVATEYAAYHQI------------DNHI 245
Query: 70 QTINPTDD-WFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIVK 128
INPTD+ FPG+ E Q+WEW YG TPKF+I+ SF + E + ++ + ++I
Sbjct: 246 HLINPTDETLFPGINSKAKELQTWEWIYGKTPKFSINTSFHVLYEQ-SHLEIKVFIDIKN 304
Query: 129 GLIESVCFKIPPALVNDEHFLQDAELLCSVQGRKF--TETAL 168
G IE + P + E ++D +L S+ G KF TET +
Sbjct: 305 GRIEICNIEAPDHWLPLE--IRD-KLNSSLIGSKFCPTETTM 343
>sp|O13629|LPLA_SCHPO Putative lipoate-protein ligase A OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=aim22 PE=3 SV=1
Length = 363
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 80 PGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEI--VKGLIESVCFK 137
P + K +E QSWEW +G TP F +H +L +S++I V G +E V F
Sbjct: 264 PSILKAVNELQSWEWTFGQTPSF---------KQHLESTELSVSMDISVVHGRLEKVIFS 314
Query: 138 IPPALVNDE 146
P A + E
Sbjct: 315 TPNATLEHE 323
>sp|O07608|LPLJ_BACSU Lipoate-protein ligase LplJ OS=Bacillus subtilis (strain 168)
GN=lplJ PE=1 SV=1
Length = 331
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
Query: 77 DWFPGLAKIQSE-YQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIVKGLIE 132
DW + +I E YQ+W+W YG +PKF ++ S P G + + LE+ KG IE
Sbjct: 224 DW-ETIHQISKERYQNWDWNYGRSPKFNLNHSKRYP-----VGSIDLHLEVKKGKIE 274
>sp|C0Q7M8|LPLA_SALPC Lipoate-protein ligase A OS=Salmonella paratyphi C (strain RKS4594)
GN=lplA PE=3 SV=1
Length = 338
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 73 NPTDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIVKGLI 131
N T D P A+ + SWEW +G P F+ + DEH G + + ++ KG+I
Sbjct: 224 NKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDEHFTWGGVELHFDVEKGVI 276
>sp|Q57G36|LPLA_SALCH Lipoate-protein ligase A OS=Salmonella choleraesuis (strain SC-B67)
GN=lplA PE=3 SV=1
Length = 338
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ + ++
Sbjct: 171 KKLAAKGITSVRSRVANLTELLPGITHEQVCQAVTEAFF------------AHYGERVDA 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DEH G + + ++
Sbjct: 219 EVISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDEHFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG+I
Sbjct: 273 KGVI 276
>sp|Q31SV2|LPLA_SHIBS Lipoate-protein ligase A OS=Shigella boydii serotype 4 (strain
Sb227) GN=lplA PE=3 SV=1
Length = 338
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ TKA G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TKAFFAHYGERVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+I + SWEW +G P F+ + DE + G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAEIFARQSSWEWNFGQAPAFS-----HLLDERFSWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|B2TZR8|LPLA_SHIB3 Lipoate-protein ligase A OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=lplA PE=3 SV=1
Length = 338
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ TKA G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TKAFFAHYGERVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+I + SWEW +G P F+ + DE + G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAEIFARQSSWEWNFGQAPAFS-----HLLDERFSWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|B7LXU8|LPLA_ECO8A Lipoate-protein ligase A OS=Escherichia coli O8 (strain IAI1)
GN=lplA PE=3 SV=1
Length = 338
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ TKA G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TKAFFAHYGERVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+I + SWEW +G P F+ + DE + G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAEIFARQSSWEWNFGQAPAFS-----HLLDERFSWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|A7MIG6|LPLA_CROS8 Lipoate-protein ligase A OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=lplA PE=3 SV=1
Length = 338
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 12/100 (12%)
Query: 79 FPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIVKGLIESVCFKI 138
PG A+ + SWEW +G P FT DE G + + ++ KG I
Sbjct: 229 LPGFAETFARQSSWEWNFGQAPAFTHQL-----DERFVWGGVELHFDVEKGHITRT---- 279
Query: 139 PPALVNDEHFLQDAELLCS-VQGRKFTETALDDLKEALTS 177
L D E L S +QG + +AL + EAL S
Sbjct: 280 --QLFTDSLNPAPLEALASRLQGCVYQASALQGVCEALVS 317
>sp|A4SQ09|LPLA_AERS4 Lipoate-protein ligase A OS=Aeromonas salmonicida (strain A449)
GN=lplA PE=3 SV=1
Length = 338
Score = 34.7 bits (78), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Query: 79 FPGLAKIQSEYQSWEWRYGSTPKFT--ISQSFDIPDEHGAPGQLVISLEIVKGLI 131
PG A + +SWEW +G P FT + + FD G + + ++ KG+I
Sbjct: 229 LPGFADTFARQRSWEWNFGHAPAFTHQLDERFDW-------GGVELHFDVEKGVI 276
>sp|C3LM83|LPLA_VIBCM Lipoate-protein ligase A OS=Vibrio cholerae serotype O1 (strain
M66-2) GN=lplA PE=3 SV=1
Length = 338
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 79 FPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIVKGLI 131
PG + ++ SW+W +G TP FT DE + G + + LE+ +G I
Sbjct: 229 LPGFEQKFAQQSSWDWNFGQTPPFTHHM-----DERFSWGGVEVYLEVERGTI 276
>sp|Q9KS71|LPLA_VIBCH Lipoate-protein ligase A OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=lplA PE=3 SV=1
Length = 338
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 79 FPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIVKGLI 131
PG + ++ SW+W +G TP FT DE + G + + LE+ +G I
Sbjct: 229 LPGFEQKFAQQSSWDWNFGQTPPFTHHM-----DERFSWGGVEVYLEVERGTI 276
>sp|A5F8E4|LPLA_VIBC3 Lipoate-protein ligase A OS=Vibrio cholerae serotype O1 (strain
ATCC 39541 / Ogawa 395 / O395) GN=lplA PE=3 SV=1
Length = 338
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 79 FPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIVKGLI 131
PG + ++ SW+W +G TP FT DE + G + + LE+ +G I
Sbjct: 229 LPGFEQKFAQQSSWDWNFGQTPPFTHHM-----DERFSWGGVEVYLEVERGTI 276
>sp|B7UR14|LPLA_ECO27 Lipoate-protein ligase A OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=lplA PE=3 SV=1
Length = 338
Score = 34.3 bits (77), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ PE++ +++ +++ + ++
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPEITHEQVCEAITEAFF------------AHYGERVEA 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|Q1QEC2|LPLA_PSYCK Lipoate-protein ligase A OS=Psychrobacter cryohalolentis (strain
K5) GN=lplA PE=3 SV=1
Length = 339
Score = 34.3 bits (77), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 20/92 (21%)
Query: 19 STPAPTLNLQEVCPEVSMDRL---IKSLGYEYLRT----KAITMEDGGEGQIAKQRGFQT 71
S A NL E +++ + L I EY R +E+ E +AKQ
Sbjct: 175 SVRARVANLVEFNEDINHETLSDAIIEAFREYYRDTDYGDTAPVEELDEASLAKQ----- 229
Query: 72 INPTDDWFPGLAKIQSEYQSWEWRYGSTPKFT 103
P L K + W+WR+G TP+FT
Sbjct: 230 --------PNLNKYYQQMADWDWRFGKTPEFT 253
>sp|A0KMH0|LPLA_AERHH Lipoate-protein ligase A OS=Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / NCIB 9240) GN=lplA PE=3 SV=1
Length = 338
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 79 FPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIVKGLI 131
PG A+ + +SWEW +G P F+ DE G + + ++ KG+I
Sbjct: 229 LPGFAETFARQRSWEWNFGHAPAFSHQL-----DERFGWGGVELHFDVEKGVI 276
>sp|Q3YU08|LPLA_SHISS Lipoate-protein ligase A OS=Shigella sonnei (strain Ss046) GN=lplA
PE=3 SV=1
Length = 338
Score = 33.5 bits (75), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ TKA G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TKAFFAHYGERVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE + G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFSWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|Q327K9|LPLA_SHIDS Lipoate-protein ligase A OS=Shigella dysenteriae serotype 1 (strain
Sd197) GN=lplA PE=3 SV=1
Length = 338
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ TKA G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TKAFFAHYGERVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE + G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFSWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|A8A8B4|LPLA_ECOHS Lipoate-protein ligase A OS=Escherichia coli O9:H4 (strain HS)
GN=lplA PE=3 SV=1
Length = 338
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ TKA G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TKAFFAHYGERVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE + G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFSWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|B7LEN2|LPLA_ECO55 Lipoate-protein ligase A OS=Escherichia coli (strain 55989 / EAEC)
GN=lplA PE=3 SV=1
Length = 338
Score = 33.5 bits (75), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ TKA G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TKAFFAHYGERVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE + G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFSWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|B1IS33|LPLA_ECOLC Lipoate-protein ligase A OS=Escherichia coli (strain ATCC 8739 /
DSM 1576 / Crooks) GN=lplA PE=3 SV=1
Length = 338
Score = 33.5 bits (75), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ TKA G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TKAFFAHYGERVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE + G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFSWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|B6I6N3|LPLA_ECOSE Lipoate-protein ligase A OS=Escherichia coli (strain SE11) GN=lplA
PE=3 SV=1
Length = 338
Score = 33.5 bits (75), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ TKA G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TKAFFAHYGERVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE + G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFSWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|A7ZVS8|LPLA_ECO24 Lipoate-protein ligase A OS=Escherichia coli O139:H28 (strain
E24377A / ETEC) GN=lplA PE=3 SV=1
Length = 338
Score = 33.5 bits (75), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ TKA G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TKAFFAHYGERVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE + G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFSWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|Q8ZJV1|LPLA_SALTY Lipoate-protein ligase A OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=lplA PE=3 SV=1
Length = 338
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ + ++
Sbjct: 171 KKLAAKGITSVRSRVANLTELLPGITHEQVCQAVTEAFF------------AHYGERVDA 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 219 EVISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG+I
Sbjct: 273 KGVI 276
>sp|B4TH09|LPLA_SALHS Lipoate-protein ligase A OS=Salmonella heidelberg (strain SL476)
GN=lplA PE=3 SV=1
Length = 338
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ + ++
Sbjct: 171 KKLAAKGITSVRSRVANLTELLPGITHEQVCQAVTEAFF------------AHYGERVDA 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 219 EVISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG+I
Sbjct: 273 KGVI 276
>sp|A9N7E6|LPLA_SALPB Lipoate-protein ligase A OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=lplA PE=3 SV=1
Length = 338
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ + ++
Sbjct: 171 KKLAAKGITSVRSRVANLTELLPGITHEQVCQAVTEAFF------------AHYGERVDA 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 219 EVISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG+I
Sbjct: 273 KGVI 276
>sp|B5R9V4|LPLA_SALG2 Lipoate-protein ligase A OS=Salmonella gallinarum (strain 287/91 /
NCTC 13346) GN=lplA PE=3 SV=1
Length = 338
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ + ++
Sbjct: 171 KKLAAKGITSVRSRVANLTELLPGITHEQVCQAVTEAFF------------AHYGERVDA 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 219 EVISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG+I
Sbjct: 273 KGVI 276
>sp|B5R2K1|LPLA_SALEP Lipoate-protein ligase A OS=Salmonella enteritidis PT4 (strain
P125109) GN=lplA PE=3 SV=1
Length = 338
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ + ++
Sbjct: 171 KKLAAKGITSVRSRVANLTELLPGITHEQVCQAVTEAFF------------AHYGERVDA 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 219 EVISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG+I
Sbjct: 273 KGVI 276
>sp|B5FTD0|LPLA_SALDC Lipoate-protein ligase A OS=Salmonella dublin (strain CT_02021853)
GN=lplA PE=3 SV=1
Length = 338
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ + ++
Sbjct: 171 KKLAAKGITSVRSRVANLTELLPGITHEQVCQAVTEAFF------------AHYGERVDA 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 219 EVISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG+I
Sbjct: 273 KGVI 276
>sp|B4T4I0|LPLA_SALNS Lipoate-protein ligase A OS=Salmonella newport (strain SL254)
GN=lplA PE=3 SV=1
Length = 338
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ ++ +++ T+A + G ++
Sbjct: 171 KKLAAKGITSVRSRVANLTELLPGITHKQVCQAV------TEAFFVHYG------ERVDA 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 219 EVISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG+I
Sbjct: 273 KGVI 276
>sp|B5F534|LPLA_SALA4 Lipoate-protein ligase A OS=Salmonella agona (strain SL483) GN=lplA
PE=3 SV=1
Length = 338
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 79 FPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIVKGLI 131
P A+ + SWEW +G P F+ + DE G + + ++ KG+I
Sbjct: 229 LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVEKGVI 276
>sp|B7MNJ3|LPLA_ECO45 Lipoate-protein ligase A OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=lplA PE=3 SV=1
Length = 338
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGG--EGQIAKQR 67
K + + S + NL E+ P ++ +++ +++ T+A G E +I
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TEAFFAHYGERVEAEII--- 221
Query: 68 GFQTINPTDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ N T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 222 ---SPNKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|P32099|LPLA_ECOLI Lipoate-protein ligase A OS=Escherichia coli (strain K12) GN=lplA
PE=1 SV=3
Length = 338
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGG--EGQIAKQR 67
K + + S + NL E+ P ++ +++ +++ T+A G E +I
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TEAFFAHYGERVEAEII--- 221
Query: 68 GFQTINPTDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ N T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 222 ---SPNKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|B1XFJ6|LPLA_ECODH Lipoate-protein ligase A OS=Escherichia coli (strain K12 / DH10B)
GN=lplA PE=3 SV=1
Length = 338
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGG--EGQIAKQR 67
K + + S + NL E+ P ++ +++ +++ T+A G E +I
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TEAFFAHYGERVEAEII--- 221
Query: 68 GFQTINPTDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ N T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 222 ---SPNKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|C4ZT68|LPLA_ECOBW Lipoate-protein ligase A OS=Escherichia coli (strain K12 / MC4100 /
BW2952) GN=lplA PE=3 SV=1
Length = 338
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGG--EGQIAKQR 67
K + + S + NL E+ P ++ +++ +++ T+A G E +I
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TEAFFAHYGERVEAEII--- 221
Query: 68 GFQTINPTDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ N T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 222 ---SPNKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|A9MRA3|LPLA_SALAR Lipoate-protein ligase A OS=Salmonella arizonae (strain ATCC
BAA-731 / CDC346-86 / RSK2980) GN=lplA PE=3 SV=1
Length = 338
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P +S +++ +++ + +E
Sbjct: 171 KKLAAKGITSVRSRVANLTELLPGLSHEQVCQAVAEAFFAHYGERVEA------------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 219 EVISPDKTPD-LPNFAETFALQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGYI 276
>sp|B3F2X5|RDRP_ROTTU RNA-directed RNA polymerase OS=Rotavirus A (isolate Monkey/United
States/TUCH/2003 G3-Px[24]-I9-R3-C3-M3-A9-Nx-Tx-Ex-Hx)
PE=3 SV=1
Length = 1088
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 21/119 (17%)
Query: 45 YEYLRTKAITMEDGGEGQIAKQRGFQTINPTDDWFPGLAKIQSEYQSWEWRYGSTPKFTI 104
+E L+ M+ G I K ++ + + FP +AKI S W + G + +
Sbjct: 285 FEELKEMLDNMKKAGLVDIPKMIQDWLVDCSIEKFPLMAKIYS----WSFHVGFRKQKML 340
Query: 105 SQSFD---------IPDEHGAPGQLVISLEIVKGLIESVCFKIPPALVNDEHFLQDAEL 154
+ D + DE ++I E+VK L E+V +D+H LQD+EL
Sbjct: 341 DAALDQLKTEYTEDVDDEMYREYTMLIRDEVVKMLEEAVK--------HDDHLLQDSEL 391
>sp|A8ALX2|LPLA_CITK8 Lipoate-protein ligase A OS=Citrobacter koseri (strain ATCC BAA-895
/ CDC 4225-83 / SGSC4696) GN=lplA PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + AS NL E+ P ++ + + ++ + +E
Sbjct: 171 KKLQAKGIASVRGRVANLVELLPGITHEHICDAITEAFFSHYGERVEA------------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P FT + DE G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFT-----HLLDERFIWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|B7MTD2|LPLA_ECO81 Lipoate-protein ligase A OS=Escherichia coli O81 (strain ED1a)
GN=lplA PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ T+A G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TEAFFAHYGERVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P+F+ + DE G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPEFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|P60776|LPLA_ECO57 Lipoate-protein ligase A OS=Escherichia coli O157:H7 GN=lplA PE=3
SV=2
Length = 338
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 79 FPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIVKGLI 131
P A+ + SWEW +G P F+ + DE + G + + ++ KG I
Sbjct: 229 LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFSWGGVELHFDVEKGHI 276
>sp|Q8FA49|LPLA_ECOL6 Lipoate-protein ligase A OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=lplA PE=3 SV=3
Length = 338
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ + +E
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAIREAFFAHYGERVEA------------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE + G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFSWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|A1WXU7|PNP_HALHL Polyribonucleotide nucleotidyltransferase OS=Halorhodospira
halophila (strain DSM 244 / SL1) GN=pnp PE=3 SV=1
Length = 702
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 59 GEGQIAKQRGFQTINPTDDWFPGLAKIQSEYQSWEWRYGSTPKFTI-SQSFDIPDEHGAP 117
G G++AK RG + + P+D+ FP + ++ SE GS+ T+ S + D G P
Sbjct: 409 GHGKLAK-RGVEAVMPSDEEFPYVIRVVSEVTESN---GSSSMATVCGTSLSLMD-AGVP 463
Query: 118 GQLVISLEIVKGLI-ESVCFKIPPALVNDEHFLQDAELLCSVQGRKFTETAL 168
+ ++ I GLI E F + ++ DE L D + V G K TAL
Sbjct: 464 LKAQVA-GIAMGLIKEGDEFAVLTDILGDEDHLGDMDF--KVAGSKDGVTAL 512
>sp|B7NH54|LPLA_ECOLU Lipoate-protein ligase A OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=lplA PE=3 SV=1
Length = 338
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ T+A G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TEAFFAHYGEHVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|B7LNS6|LPLA_ESCF3 Lipoate-protein ligase A OS=Escherichia fergusonii (strain ATCC
35469 / DSM 13698 / CDC 0568-73) GN=lplA PE=3 SV=1
Length = 338
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ T+A G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TEAFFAHYGERVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|Q0T8S7|LPLA_ECOL5 Lipoate-protein ligase A OS=Escherichia coli O6:K15:H31 (strain 536
/ UPEC) GN=lplA PE=3 SV=1
Length = 338
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ T+A G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TEAFFAHYGERVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|Q1R257|LPLA_ECOUT Lipoate-protein ligase A OS=Escherichia coli (strain UTI89 / UPEC)
GN=lplA PE=3 SV=1
Length = 338
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ T+A G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TEAFFAHYGERVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|A1AJV3|LPLA_ECOK1 Lipoate-protein ligase A OS=Escherichia coli O1:K1 / APEC GN=lplA
PE=3 SV=1
Length = 338
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ T+A G +
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAI------TEAFFAHYGERVEA------ 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
>sp|B1LEJ1|LPLA_ECOSM Lipoate-protein ligase A OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=lplA PE=3 SV=1
Length = 338
Score = 31.2 bits (69), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 20/124 (16%)
Query: 10 KGIISNATASTPAPTLNLQEVCPEVSMDRLIKSLGYEYLRTKAITMEDGGEGQIAKQRGF 69
K + + S + NL E+ P ++ +++ +++ + ++
Sbjct: 171 KKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFF------------AHYGERVEA 218
Query: 70 QTINP--TDDWFPGLAKIQSEYQSWEWRYGSTPKFTISQSFDIPDEHGAPGQLVISLEIV 127
+ I+P T D P A+ + SWEW +G P F+ + DE G + + ++
Sbjct: 219 EIISPDKTPD-LPNFAETFARQSSWEWNFGQAPAFS-----HLLDERFTWGGVELHFDVE 272
Query: 128 KGLI 131
KG I
Sbjct: 273 KGHI 276
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,338,105
Number of Sequences: 539616
Number of extensions: 2848007
Number of successful extensions: 6582
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 6562
Number of HSP's gapped (non-prelim): 62
length of query: 194
length of database: 191,569,459
effective HSP length: 111
effective length of query: 83
effective length of database: 131,672,083
effective search space: 10928782889
effective search space used: 10928782889
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)