Query psy8037
Match_columns 292
No_of_seqs 286 out of 1394
Neff 7.5
Searched_HMMs 46136
Date Fri Aug 16 16:49:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8037.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8037hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3953|consensus 100.0 1.5E-44 3.3E-49 310.8 14.9 199 36-290 6-205 (242)
2 smart00449 SPRY Domain in SPla 99.9 2.2E-24 4.9E-29 172.7 15.7 118 98-231 1-121 (122)
3 PF00622 SPRY: SPRY domain; I 99.9 1.3E-22 2.8E-27 162.3 15.9 119 98-231 1-122 (124)
4 KOG4367|consensus 99.8 7E-18 1.5E-22 156.8 14.2 157 58-234 536-695 (699)
5 KOG2626|consensus 99.7 7.2E-18 1.6E-22 160.6 10.0 158 58-234 294-496 (544)
6 KOG0349|consensus 99.7 1.9E-17 4.2E-22 154.9 10.0 170 52-255 84-257 (725)
7 KOG4030|consensus 99.4 4.5E-12 9.9E-17 103.4 15.4 158 39-229 19-176 (197)
8 KOG2243|consensus 98.6 1.2E-07 2.6E-12 98.1 9.0 117 95-230 1102-1225(5019)
9 KOG3953|consensus 97.9 1.3E-05 2.8E-10 70.2 4.8 34 201-234 168-201 (242)
10 KOG1477|consensus 97.6 0.00024 5.3E-09 69.4 9.2 163 56-232 31-203 (469)
11 PF13765 PRY: SPRY-associated 97.5 0.00016 3.5E-09 48.6 4.1 39 57-96 1-49 (49)
12 smart00589 PRY associated with 96.0 0.013 2.7E-07 39.2 4.2 40 56-96 3-52 (52)
13 PF00622 SPRY: SPRY domain; I 95.2 0.043 9.4E-07 43.0 5.2 47 236-283 73-121 (124)
14 KOG1477|consensus 91.5 0.083 1.8E-06 51.9 1.2 57 171-228 21-77 (469)
15 smart00449 SPRY Domain in SPla 91.3 0.33 7.1E-06 38.0 4.3 40 236-275 72-113 (122)
16 KOG2243|consensus 91.2 0.34 7.4E-06 52.4 5.2 118 97-218 1430-1555(5019)
17 KOG2177|consensus 87.9 1.6 3.6E-05 38.7 6.7 111 88-220 251-365 (386)
18 PF07177 Neuralized: Neuralize 81.7 8.7 0.00019 27.5 6.7 63 58-123 3-67 (69)
19 PF15409 PH_8: Pleckstrin homo 46.2 21 0.00045 27.0 2.7 19 180-198 17-35 (89)
20 KOG2626|consensus 40.8 44 0.00095 33.3 4.6 88 194-284 392-493 (544)
21 smart00588 NEUZ domain in neur 36.3 2E+02 0.0043 22.9 7.1 60 62-123 7-68 (123)
22 PF11393 IcmL: Macrophage kill 30.6 46 0.00099 25.9 2.5 21 88-108 85-105 (108)
23 KOG1538|consensus 30.6 2.7E+02 0.0058 29.1 8.3 66 113-201 144-216 (1081)
24 COG5513 Predicted secreted pro 27.2 99 0.0021 24.4 3.7 26 97-124 70-95 (113)
25 PF10665 Minor_capsid_1: Minor 23.3 1.3E+02 0.0029 23.7 4.0 50 57-107 64-113 (114)
26 KOG0349|consensus 21.6 93 0.002 30.7 3.2 46 235-282 193-241 (725)
27 PF08893 DUF1839: Domain of un 21.0 1.2E+02 0.0027 28.3 3.8 43 178-220 123-178 (319)
No 1
>KOG3953|consensus
Probab=100.00 E-value=1.5e-44 Score=310.80 Aligned_cols=199 Identities=64% Similarity=1.135 Sum_probs=177.1
Q ss_pred CCCChhhccCCCCCCccCccceeeccCCCCCcEEEccCCeEEEEeCCcccCcceEeeccCCcCCeEEEEEEEeeecCCce
Q psy8037 36 RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTH 115 (292)
Q Consensus 36 ~~~~~~~L~~~~~~~~~~~~~~t~dp~~~~~~l~lS~d~~~~~~~~p~~~~~~~Vlg~~gfssGkhYWEV~V~~~~~~~~ 115 (292)
.+.+++.|+.|++....+|..|.|++++++.|+.+.+++++++++||+++++++++|+.+++.|+|+|||.|...+.||+
T Consensus 6 ~~~~l~~l~~~~~~~~~~~~~~~w~~~drs~nv~vk~~~~~tfhrhpvaqstd~~rGk~g~~~g~h~w~i~w~~r~~GT~ 85 (242)
T KOG3953|consen 6 ESVRLDQLLFMPPSALGVQAQHGWSPSDRSLNVFVKLPDGLTFHRHPVAQSTDGIRGKRGYSRGRHAWEIAWPNRQRGTH 85 (242)
T ss_pred cccccchhhhcCCcchhhHHhhccCcccccceeEEecCCcceEEecCCccccccccceeeeccCceEEEEEecCCccCCc
Confidence 34567788899988777777799999999999999988889999999999999999999999999999999999899999
Q ss_pred eEEEEeeccccCCcCCcccccCCCCCeEEEEEcCCeEEecCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEE
Q psy8037 116 AVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVV 195 (292)
Q Consensus 116 w~vGVa~~~~~l~~~g~~~~lG~~~~swg~~~~~g~~~h~~~~~~~~~y~~~~~~~~~~~~~d~IGV~LD~~~GtLsFy~ 195 (292)
.+|||||+.+++|+.++.+++|++++||||.+.++.++|++.. ...||++++ .+.+..|++|+|.|||++|+++|.+
T Consensus 86 avVGIaTk~Aplha~gy~aLlGs~~qswGw~l~~~~l~H~g~~--~~~yp~~~~-~p~~~vp~ri~viLDm~egtl~F~~ 162 (242)
T KOG3953|consen 86 AVVGIATKVAPLHAVGYTALLGSNSQSWGWDLGRNVLYHDGQV--AGLYPALNR-QPKYNVPDRILVILDMIEGTLSFAA 162 (242)
T ss_pred ceEEEEcccCchhhhHHHHHhCCCCCccceecccceeeecCcc--ccccccccC-CchhcCCceEEEEEeeccceEEEEE
Confidence 9999999999999999999999999999999999999999843 357998877 6889999999999999988888873
Q ss_pred CCeeeeeeeeecCCCceEEEEEeecCCeEEEEEEccCCCccccCCCceeEEeeCCeeeeeecCCCcCccccceeeeeeee
Q psy8037 196 DGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDLILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGH 275 (292)
Q Consensus 196 ng~~lg~aF~~~~~~~lyP~fs~~~~~~~v~l~~~~~~~~~ld~~~~~l~f~~~~~~l~~af~~l~~~~l~~~~~~~~~~ 275 (292)
+ ++|||+||+||++++|||++|+|||+
T Consensus 163 ~-----------------------------------------------------~e~LGvAFRgL~~~~LYP~Vsav~g~ 189 (242)
T KOG3953|consen 163 D-----------------------------------------------------GEYLGVAFRGLKDKKLYPAVSAVWGH 189 (242)
T ss_pred C-----------------------------------------------------CeEEeeeecCCCCCcceeeeeehhcc
Confidence 3 46777788888888999999999999
Q ss_pred eeEEEEEecCCC-CCC
Q psy8037 276 CEITMKYIGGLD-PQS 290 (292)
Q Consensus 276 ~~~~~~~~~~~~-~~~ 290 (292)
|||+|+|+|++| +|+
T Consensus 190 ~Evtm~Ylg~~~~~e~ 205 (242)
T KOG3953|consen 190 CEVTMKYLGTLDVDEP 205 (242)
T ss_pred eeEEEEEeCCcCcCCc
Confidence 999999999988 543
No 2
>smart00449 SPRY Domain in SPla and the RYanodine Receptor. Domain of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin homologues.
Probab=99.92 E-value=2.2e-24 Score=172.65 Aligned_cols=118 Identities=35% Similarity=0.587 Sum_probs=96.4
Q ss_pred CCeEEEEEEEeeecCCceeEEEEeeccccCCcCCcccccCCCCCeEEEEEcCCeEEecCccCCCcccCCcCCCCCCccC-
Q psy8037 98 KGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVV- 176 (292)
Q Consensus 98 sGkhYWEV~V~~~~~~~~w~vGVa~~~~~l~~~g~~~~lG~~~~swg~~~~~g~~~h~~~~~~~~~y~~~~~~~~~~~~- 176 (292)
||+|||||+|..+ ..|.||||++.+++ +....+|++..||+++..++..+|+.... .| +..+..
T Consensus 1 sG~~YwEV~v~~~---~~~~vGv~~~~~~r---~~~~~~G~~~~sw~~~~~~g~~~~~~~~~---~~------~~~~~~~ 65 (122)
T smart00449 1 SGRHYFEVEIFDG---GHWRVGVATKSVPR---GYFALLGEDKGSWGYDGDGGKKYHNSTGP---EY------GLPLQEP 65 (122)
T ss_pred CCcEEEEEEEcCC---CeEEEEEEcCccCC---CccccCCCCCCEEEEEcCCCcEEeCCCCC---cc------CccccCC
Confidence 6999999999874 68999999998873 34668999999999998777888876531 24 234454
Q ss_pred CCEEEEEEeCCCCEEEEEECCeee-eeeeeec-CCCceEEEEEeecCCeEEEEEEcc
Q psy8037 177 PDKFLVILDMDEGTLSFVVDGQYL-GVAFRGL-KGRKLYPIVSAVWGHCEITMKYIG 231 (292)
Q Consensus 177 ~d~IGV~LD~~~GtLsFy~ng~~l-g~aF~~~-~~~~lyP~fs~~~~~~~v~l~~~~ 231 (292)
+|+|||+||+++|+|+||+|++.+ +++|..+ +.++|||+|++.. .+.++++|+.
T Consensus 66 gd~iGv~lD~~~g~l~F~~ng~~~~~~~f~~~~~~~~l~P~~~~~~-~~~~~~n~g~ 121 (122)
T smart00449 66 GDVIGCFLDLEAGTISFYKNGKYLHGLAFFDVKFSGPLYPAVSLGS-GCSVRLNFGP 121 (122)
T ss_pred CCEEEEEEECCCCEEEEEECCCEeeeEEEeccCCCCcEeeEEEcCC-CCEEEEEecC
Confidence 999999999999999999999998 7999876 5679999999954 4478888763
No 3
>PF00622 SPRY: SPRY domain; InterPro: IPR003877 The SPRY domain is of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin []. Ca2+-release from the sarcoplasmic or endoplasmic reticulum, the intracellular Ca2+ store, is mediated by the ryanodine receptor (RyR) and/or the inositol trisphosphate receptor (IP3R).; GO: 0005515 protein binding; PDB: 2V24_A 3EK9_A 2AFJ_A 2IWG_E 3EMW_A 2WL1_A 3TOJ_B 2VOK_A 2VOL_B 2FNJ_A ....
Probab=99.90 E-value=1.3e-22 Score=162.29 Aligned_cols=119 Identities=30% Similarity=0.489 Sum_probs=96.3
Q ss_pred CCeEEEEEEEeeecCCceeEEEEeeccccCCcCCcccccCCCCCeEEEEEcCCeEEecCccCCCcccCCcCCCCCCccC-
Q psy8037 98 KGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVV- 176 (292)
Q Consensus 98 sGkhYWEV~V~~~~~~~~w~vGVa~~~~~l~~~g~~~~lG~~~~swg~~~~~g~~~h~~~~~~~~~y~~~~~~~~~~~~- 176 (292)
||+|||||+|... ..|.|||++++.. .......+|.+..+|+++...+..+|+.... .+ ...+..
T Consensus 1 sG~~YwEV~v~~~---~~~~iGv~~~~~~--~~~~~~~~g~~~~s~~~~~~~~~~~~~~~~~---~~------~~~~~~~ 66 (124)
T PF00622_consen 1 SGKHYWEVEVDSG---GSISIGVATSSAS--VSGDENLSGYDPFSWGFHGDGGKKYHGGTSE---ET------GSPFQEP 66 (124)
T ss_dssp SSEEEEEEEETGG---CTEEEEEEETTSE--ESSSTS-TTSSTTEEEEETTTTTEEESTSSS---EC------SCTSSTT
T ss_pred CcCEEEEEEEecC---cCEEEEEeECccc--cCCccccCCccccceeeeccccccceeeccc---cc------ccccccC
Confidence 7999999999875 4599999999872 2234567888889999987655788876532 23 345565
Q ss_pred CCEEEEEEeCCCCEEEEEECCeeee-eeeeec-CCCceEEEEEeecCCeEEEEEEcc
Q psy8037 177 PDKFLVILDMDEGTLSFVVDGQYLG-VAFRGL-KGRKLYPIVSAVWGHCEITMKYIG 231 (292)
Q Consensus 177 ~d~IGV~LD~~~GtLsFy~ng~~lg-~aF~~~-~~~~lyP~fs~~~~~~~v~l~~~~ 231 (292)
+|+|||+||+++|+|+||+||+.++ ++|+++ +.++|||+|++.. +++++++|..
T Consensus 67 ~dvIG~~lD~~~g~l~F~~ng~~~~~~~f~~~~~~~~l~P~v~~~~-~~~~~~n~g~ 122 (124)
T PF00622_consen 67 GDVIGCGLDLDNGELSFYKNGKFLGIYAFTDIDFSEPLYPAVSLGG-GQSVELNFGQ 122 (124)
T ss_dssp TSEEEEEEETTTTEEEEEETTEEEEEEEEESCTTSSSBEEEEEEES-TSEEEEEEEC
T ss_pred CcEEEEEEeecccEEEEEECCccceeEEEECCCCCCcEEEEEEecC-CCEEEEEeCC
Confidence 9999999999999999999999999 999976 4579999999965 8999999875
No 4
>KOG4367|consensus
Probab=99.76 E-value=7e-18 Score=156.78 Aligned_cols=157 Identities=22% Similarity=0.382 Sum_probs=121.0
Q ss_pred eeccCCCCCcEEEccCCeEEEEeCCcccCcceEeeccCCcCCeEEEEEEEeeecCCceeEEEEeeccccCCcCCcccccC
Q psy8037 58 AWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVG 137 (292)
Q Consensus 58 t~dp~~~~~~l~lS~d~~~~~~~~p~~~~~~~Vlg~~gfssGkhYWEV~V~~~~~~~~w~vGVa~~~~~l~~~g~~~~lG 137 (292)
.++|..+++.+++| ++..++.... ..+..|||+.+|+.|.|||||.++.....++..||||...+. ...++|
T Consensus 536 qlt~spsqrdmils-necatlsgss--leyrtilgsiafskgvhywevtidrhdgnsdivigvaqpavn-----rnvmlg 607 (699)
T KOG4367|consen 536 QLTPSPSQRDMILS-NECATLSGSS--LEYRTILGSIAFSKGVHYWEVTIDRHDGNSDIVIGVAQPAVN-----RNVMLG 607 (699)
T ss_pred eccCCchhhceeee-cccceecccc--cchheeeeecccccceeEEEEEEeccCCCCCceEEecchhhh-----hceeec
Confidence 56788888889999 5565665432 235689999999999999999999876667899999998776 257899
Q ss_pred CCCCeEEEEEcCC--eEEecCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEECCeeee-eeeeecCCCceEE
Q psy8037 138 SNDQSWGWDLGRN--RLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLG-VAFRGLKGRKLYP 214 (292)
Q Consensus 138 ~~~~swg~~~~~g--~~~h~~~~~~~~~y~~~~~~~~~~~~~d~IGV~LD~~~GtLsFy~ng~~lg-~aF~~~~~~~lyP 214 (292)
.|...|.+..+.. ++.||..+.+ .. ......|.+|||.||++.|++.|+.|.+..+ .||++..+ -+||
T Consensus 608 kdlhgwsmyvdgerswylhnethhn-rv-------lggvtrgtvigvrldcdrgtmeytvndrqddsmaftnmrg-lyyp 678 (699)
T KOG4367|consen 608 KDLHGWSMYVDGERSWYLHNETHHN-RV-------LGGVTRGTVIGVRLDCDRGTMEYTVNDRQDDSMAFTNMRG-LYYP 678 (699)
T ss_pred ccccceeEEEcCcceeEEecccccc-cc-------ccccccccEEEEEEeccCCceEEEeccccCCceeeecccc-eeee
Confidence 9999999866433 4678765432 11 1356789999999999999999999987655 89999954 7999
Q ss_pred EEEeecCCeEEEEEEccCCC
Q psy8037 215 IVSAVWGHCEITMKYIGGLD 234 (292)
Q Consensus 215 ~fs~~~~~~~v~l~~~~~~~ 234 (292)
+|++ ..+.+|+ ...|++
T Consensus 679 afsv-nanssit--vhtgls 695 (699)
T KOG4367|consen 679 AFSV-NANSSIT--VHTGLS 695 (699)
T ss_pred eeEe-ccCceEE--EecCCC
Confidence 9999 4455555 455554
No 5
>KOG2626|consensus
Probab=99.74 E-value=7.2e-18 Score=160.60 Aligned_cols=158 Identities=20% Similarity=0.392 Sum_probs=132.8
Q ss_pred eeccCCCCCcEEEccCCeEEEEeCCcccCcceEeeccCCcCCeEEEEEEEeeecCCceeEEEEeeccccCCcCCcccccC
Q psy8037 58 AWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVG 137 (292)
Q Consensus 58 t~dp~~~~~~l~lS~d~~~~~~~~p~~~~~~~Vlg~~gfssGkhYWEV~V~~~~~~~~w~vGVa~~~~~l~~~g~~~~lG 137 (292)
.+.-.+....+.|| ++++++.. ..++..||++.+...|.|||||.|+..+.+++.+|||++.-.+| +..+|
T Consensus 294 ~l~~hdrA~ql~Is-~drlt~tg---eKGy~MvRAshgv~~G~WYFEI~vd~~pd~~a~RlGwsq~~g~L-----qApvG 364 (544)
T KOG2626|consen 294 NLSWHDRAEQLKIS-EDRLTATG---EKGYRMVRASHGVLEGAWYFEIKVDEMPDDAAIRLGWSQLYGNL-----QAPVG 364 (544)
T ss_pred hhhhhccccccccc-ccceeeec---ccceeeeeecccccccceeEEEEeecCCCccceeeecccccccc-----ccccc
Confidence 44556778899999 56766653 24688999999999999999999988777889999999988775 67899
Q ss_pred CCCCeEEEEEcCCeEEecCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCC----------------------------
Q psy8037 138 SNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEG---------------------------- 189 (292)
Q Consensus 138 ~~~~swg~~~~~g~~~h~~~~~~~~~y~~~~~~~~~~~~~d~IGV~LD~~~G---------------------------- 189 (292)
.|..||+|+-..|..+|.+. +..| ...|+.||+||+++++...
T Consensus 365 YdkfsY~wRdk~GtKfh~s~---gk~Y------~~gf~qGDvLGf~I~LP~~~~~~~~lp~~~kdk~lI~yK~~lyfe~~ 435 (544)
T KOG2626|consen 365 YDKFSYGWRDKKGTKFHESL---GKHY------SDGFGQGDVLGFYINLPKDLSPEKYLPLTHKDKFLIKYKGHLYFEDP 435 (544)
T ss_pred cccccccccccCCcchhhhh---hhhh------hhhccCCceEEEEEecCCcccccccCCccccccceeeeeeeeEEEcc
Confidence 99999999988888888765 3457 4579999999999988632
Q ss_pred ----------------EEEEEECCeeeeeeeeecC-CCceEEEEEeecCCeEEEEEEccCCC
Q psy8037 190 ----------------TLSFVVDGQYLGVAFRGLK-GRKLYPIVSAVWGHCEITMKYIGGLD 234 (292)
Q Consensus 190 ----------------tLsFy~ng~~lg~aF~~~~-~~~lyP~fs~~~~~~~v~l~~~~~~~ 234 (292)
.|.||+||..+|.||.+++ .+.+||++|+ +.+|.|+|||...+.
T Consensus 436 d~v~k~~k~l~~~pgS~I~f~KNG~~qG~Ay~ni~~~G~YyPaIS~-yks~tv~~nfGP~F~ 496 (544)
T KOG2626|consen 436 DNVAKIEKTLKIKPGSEIEFFKNGVSQGVAYENIYKAGAYYPAISI-YKSCTVKFNFGPQFR 496 (544)
T ss_pred chhhhhhhccccCCCceEEEeecccchhhhhhhhhccccccceeee-cccceEEEecccccc
Confidence 6899999999999999998 4689999999 557999999987653
No 6
>KOG0349|consensus
Probab=99.72 E-value=1.9e-17 Score=154.86 Aligned_cols=170 Identities=24% Similarity=0.371 Sum_probs=132.8
Q ss_pred cCccceeeccCCCCCcEEEccCCeEEEEeCCcccCcceEeeccCCc-CCeEEEEEEEeeecCCceeEEEEeeccccCCcC
Q psy8037 52 ETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFT-KGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSV 130 (292)
Q Consensus 52 ~~~~~~t~dp~~~~~~l~lS~d~~~~~~~~p~~~~~~~Vlg~~gfs-sGkhYWEV~V~~~~~~~~w~vGVa~~~~~l~~~ 130 (292)
.....|++|+.+....+.|. .+++..... +...|.+.|++.|.. .||||+||.+.++ .-++|||+|..++|
T Consensus 84 ga~~~w~mn~~Drg~alaI~-~dGL~CqSr-e~KeWhGcRaT~Gl~gkGK~YyEvtitd~---GLCRVGWsT~qasL--- 155 (725)
T KOG0349|consen 84 GAPREWKMNKQDRGLALAID-EDGLACQSR-EKKEWHGCRATAGLYGKGKYYYEVTITDK---GLCRVGWSTLQASL--- 155 (725)
T ss_pred CCccccccCccccCceeeEc-CCccccchh-HHhhhhccccccccccCceEEEEEEeccC---ceeeechhhccccc---
Confidence 44568999999999999998 445533221 123578889999986 9999999999886 67999999988875
Q ss_pred CcccccCCCCCeEEEEEcCCeEEecCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEECCeeeeeeee---ec
Q psy8037 131 GYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFR---GL 207 (292)
Q Consensus 131 g~~~~lG~~~~swg~~~~~g~~~h~~~~~~~~~y~~~~~~~~~~~~~d~IGV~LD~~~GtLsFy~ng~~lg~aF~---~~ 207 (292)
.+|.+..++||.. +|+..|+.+. ..| |..|..-|+|||+||.+.++|.|.+||+.+|.||+ +.
T Consensus 156 ----dlGt~~~gFGfGG-TGkKS~nkqF---DdY------Ge~Ft~~DvIGCyLDld~~~v~fsKNG~~lg~AF~ip~~~ 221 (725)
T KOG0349|consen 156 ----DLGTGLDGFGFGG-TGKKSTNKQF---DDY------GEPFTLNDVIGCYLDLDSRTVWFSKNGEQLGAAFSIPVKY 221 (725)
T ss_pred ----ccCccccccccCc-cCcccccccc---ccc------cCcccccceeeEEEeccCceEEEecCccccceeEEcChhh
Confidence 3677778888864 6777776543 357 78999999999999999999999999999999998 34
Q ss_pred CCCceEEEEEeecCCeEEEEEEccCCCccccCCCceeEEeeCCeeeee
Q psy8037 208 KGRKLYPIVSAVWGHCEITMKYIGGLDLILDMDEGTLSFVVDGQYLGV 255 (292)
Q Consensus 208 ~~~~lyP~fs~~~~~~~v~l~~~~~~~~~ld~~~~~l~f~~~~~~l~~ 255 (292)
..+.|||++-+. |+++++||.... ..|+++++|.++
T Consensus 222 kn~~lfPAvvlk--Nael~fNFG~~~----------FKfpPgngFva~ 257 (725)
T KOG0349|consen 222 KNSNLFPAVVLK--NAELSFNFGSQP----------FKFPPGNGFVAV 257 (725)
T ss_pred cccccchheeec--cceEEEecCCCc----------cccCCCCceEEe
Confidence 577899999884 788998885432 345666666643
No 7
>KOG4030|consensus
Probab=99.45 E-value=4.5e-12 Score=103.44 Aligned_cols=158 Identities=17% Similarity=0.274 Sum_probs=113.3
Q ss_pred ChhhccCCCCCCccCccceeeccCCCCCcEEEccCCeEEEEeCCcccCcceEeeccCCcCCeEEEEEEEeeecCCceeEE
Q psy8037 39 RLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVV 118 (292)
Q Consensus 39 ~~~~L~~~~~~~~~~~~~~t~dp~~~~~~l~lS~d~~~~~~~~p~~~~~~~Vlg~~gfssGkhYWEV~V~~~~~~~~w~v 118 (292)
.-+.|+.||. +.+|.....++++|-.+.+ .+ +++.+++++.++..-|-||||++... ..|.|
T Consensus 19 s~~rl~e~P~--------V~LD~~hMG~dVvilk~g~-Ri------cGtGG~lAtaPlvQnKsYFevkiQ~t---G~Wgi 80 (197)
T KOG4030|consen 19 SYPRLNEVPT--------VRLDVGHMGKDVVILKEGE-RI------CGTGGALATAPLVQNKSYFEVKIQQT---GTWGI 80 (197)
T ss_pred cchhhhcCCc--------EEeehhccCCcEEEEecCc-EE------eccCceeeeeeeecccceEEEEEeec---ceeee
Confidence 3445566653 3455556666666542322 22 34678999999999999999999763 67999
Q ss_pred EEeeccccCCcCCcccccCCCCCeEEEEEcCCeEEecCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEECCe
Q psy8037 119 GVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQ 198 (292)
Q Consensus 119 GVa~~~~~l~~~g~~~~lG~~~~swg~~~~~g~~~h~~~~~~~~~y~~~~~~~~~~~~~d~IGV~LD~~~GtLsFy~ng~ 198 (292)
|++++..++++ ...|.+..||+++- +|.++|+..... ..|+. .....+|+|||..| .=+|.||.||+
T Consensus 81 Glat~q~~l~~----~p~g~d~~sw~~r~-dga~~hnnee~~--r~pa~----~~p~EGDvVGvayD--HVELnfY~NGK 147 (197)
T KOG4030|consen 81 GLATKQSPLDK----VPGGCDEKSWGIRD-DGAIAHNNEEVA--RMPAT----VFPEEGDVVGVAYD--HVELNFYVNGK 147 (197)
T ss_pred eeeeccCcccc----CCCCCcceeEEEcc-CCchhcccHHHh--cCccc----cCCccCcEEEEEee--eEEEEEEEcCc
Confidence 99999988753 35678999999974 677899876432 12211 12267999999866 56899999999
Q ss_pred eeeeeeeecCCCceEEEEEeecCCeEEEEEE
Q psy8037 199 YLGVAFRGLKGRKLYPIVSAVWGHCEITMKY 229 (292)
Q Consensus 199 ~lg~aF~~~~~~~lyP~fs~~~~~~~v~l~~ 229 (292)
.+...|+++.+ ++||.+.... +.-.-+.|
T Consensus 148 n~e~p~~gvRG-~vyPvvYVdd-sAILD~~f 176 (197)
T KOG4030|consen 148 NVEDPITGVRG-PVYPVVYVDD-SAILDLKF 176 (197)
T ss_pred eeccccccccc-ceeeEEEeCC-ceEEEEEe
Confidence 99999999987 9999999843 33344443
No 8
>KOG2243|consensus
Probab=98.62 E-value=1.2e-07 Score=98.09 Aligned_cols=117 Identities=18% Similarity=0.318 Sum_probs=90.7
Q ss_pred CCcCCeEEEEEEEeeecCCceeEEEEeeccccCCcCCcccccCCCCCeEEEEEcCCeEEecCccCCCcccCCcCCCCCCc
Q psy8037 95 GFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETF 174 (292)
Q Consensus 95 gfssGkhYWEV~V~~~~~~~~w~vGVa~~~~~l~~~g~~~~lG~~~~swg~~~~~g~~~h~~~~~~~~~y~~~~~~~~~~ 174 (292)
+..+|+||||.++... +.++||+++..+.. +..+|.|+..+.+....++.||.+.. .| |..+
T Consensus 1102 avkagkwyfefe~vt~---gdmrvgwarpgc~p-----d~elgadd~af~fdg~k~qrwhqg~~----~~------grsw 1163 (5019)
T KOG2243|consen 1102 AVKAGKWYFEFETVTA---GDMRVGWARPGCQP-----DQELGADDQAFAFDGFKAQRWHQGNE----HF------GRSW 1163 (5019)
T ss_pred eeeccceEEEEEEeec---cceeecccCCCCCc-----chhhCCccceeeeccchhhhhhcccc----cc------cccc
Confidence 4579999999998774 68999999987763 45789999999988767788998753 25 7789
Q ss_pred cCCCEEEEEEeCCCCEEEEEECCeee----e--eeeeec-CCCceEEEEEeecCCeEEEEEEc
Q psy8037 175 VVPDKFLVILDMDEGTLSFVVDGQYL----G--VAFRGL-KGRKLYPIVSAVWGHCEITMKYI 230 (292)
Q Consensus 175 ~~~d~IGV~LD~~~GtLsFy~ng~~l----g--~aF~~~-~~~~lyP~fs~~~~~~~v~l~~~ 230 (292)
+.||+|||.+|+++.++-|+.||+-+ | .||.+. .+..+.|..++.- ...-+|||.
T Consensus 1164 q~gdvvgcmi~l~d~sm~ftlngeili~~~gselaf~d~di~~gfipic~lg~-aqigrmn~g 1225 (5019)
T KOG2243|consen 1164 QAGDVVGCMIDLDDASMIFTLNGEILIDDKGSELAFADFDIEDGFIPICCLGL-AQIGRMNFG 1225 (5019)
T ss_pred CCCCeEEEEEecccceEEEEEcCeEEEcCCCCeeeeccccccCCceeeeehhh-HhhcccccC
Confidence 99999999999999999999999865 2 578765 3446778877733 223346653
No 9
>KOG3953|consensus
Probab=97.92 E-value=1.3e-05 Score=70.24 Aligned_cols=34 Identities=82% Similarity=1.504 Sum_probs=32.6
Q ss_pred eeeeeecCCCceEEEEEeecCCeEEEEEEccCCC
Q psy8037 201 GVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLD 234 (292)
Q Consensus 201 g~aF~~~~~~~lyP~fs~~~~~~~v~l~~~~~~~ 234 (292)
|+||+++.+++|||++|.+||+|+|+|.|.+.++
T Consensus 168 GvAFRgL~~~~LYP~Vsav~g~~Evtm~Ylg~~~ 201 (242)
T KOG3953|consen 168 GVAFRGLKDKKLYPAVSAVWGHCEVTMKYLGTLD 201 (242)
T ss_pred eeeecCCCCCcceeeeeehhcceeEEEEEeCCcC
Confidence 7899999999999999999999999999999987
No 10
>KOG1477|consensus
Probab=97.64 E-value=0.00024 Score=69.45 Aligned_cols=163 Identities=13% Similarity=0.062 Sum_probs=104.8
Q ss_pred ceeeccCCCCCcEE-EccCCeEEEEeCCcc---cCcceEeeccCC--cCCeEEEEEEEeeecCCceeEEEEeeccccCCc
Q psy8037 56 KHAWNPEDRSLNIF-VKDDDKLTFHRHPVA---QSTDCIRGRVGF--TKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHS 129 (292)
Q Consensus 56 ~~t~dp~~~~~~l~-lS~d~~~~~~~~p~~---~~~~~Vlg~~gf--ssGkhYWEV~V~~~~~~~~w~vGVa~~~~~l~~ 129 (292)
...||+.+.+..+. ++.|.. ..+..+.+ .....+.+.... .-|.||||+++.+......+.||......++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~g-i~f~~~~~~~~~dvg~~~~~~~~~~N~~~~~Fe~~i~d~g~~~~i~i~~~~~~~~~-- 107 (469)
T KOG1477|consen 31 PCEVNTINGSDFFTKNGPDMG-IAFYTPPALLYHDVGVVQAGEPLPANFGIYYFEFDILDYGIEGRIKIGFLIDSFSI-- 107 (469)
T ss_pred cceEeccCCceeEEEEcCCcc-eeeecCccccCCCcceeeCCCCCCcccccceeeeeHHHhhhhhceEEEEEeccccc--
Confidence 55777777665544 333333 33333322 112344444444 3568999999986533344566666666554
Q ss_pred CCcccccCCCCCeEEEEEcCCeEEecCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEECCeeeeeeeeecCC
Q psy8037 130 VGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKG 209 (292)
Q Consensus 130 ~g~~~~lG~~~~swg~~~~~g~~~h~~~~~~~~~y~~~~~~~~~~~~~d~IGV~LD~~~GtLsFy~ng~~lg~aF~~~~~ 209 (292)
....|+...+|+|...+|.++|.+.. .+..| ++.+..+|.|||-.+.-..++.|++||...|.++..+..
T Consensus 108 ---~~~~g~~~~s~~y~g~~g~l~~~~~~-~~~~~------~~~~~~~D~ig~~~~~~~q~i~~t~~g~~~~~~~~~~~~ 177 (469)
T KOG1477|consen 108 ---IESEGYTMNSLGYHGNSGLLDNGGAE-LGEEF------GPTFTTGDEIGCGINEITQEIFFTKNGTEVGEIIKPLSP 177 (469)
T ss_pred ---ccccchhhhhhcccCCchhhhhhhhh-hchhh------cCCCCccceeeeccchhhheeeeccCccccccccccccc
Confidence 23456656689987766766652321 12334 678899999999999999999999999999988887755
Q ss_pred CceEEE----EEeecCCeEEEEEEccC
Q psy8037 210 RKLYPI----VSAVWGHCEITMKYIGG 232 (292)
Q Consensus 210 ~~lyP~----fs~~~~~~~v~l~~~~~ 232 (292)
.++|. +.+...+..|.+++...
T Consensus 178 -~~~~~~~n~~~~~s~~~~I~~~~g~~ 203 (469)
T KOG1477|consen 178 -DLLEENGNLAWLFSPNEEVEVNFGLE 203 (469)
T ss_pred -cccccccceeeEeccCceeeeeecCC
Confidence 34444 44445577888888743
No 11
>PF13765 PRY: SPRY-associated domain; PDB: 3KB5_A 2VOK_A 2VOL_B 2FBE_B 2WL1_A 2IWG_E.
Probab=97.49 E-value=0.00016 Score=48.61 Aligned_cols=39 Identities=18% Similarity=0.316 Sum_probs=24.4
Q ss_pred eeeccCCCCCcEEEccCCeEEEEeC---------Ccc-cCcceEeeccCC
Q psy8037 57 HAWNPEDRSLNIFVKDDDKLTFHRH---------PVA-QSTDCIRGRVGF 96 (292)
Q Consensus 57 ~t~dp~~~~~~l~lS~d~~~~~~~~---------p~~-~~~~~Vlg~~gf 96 (292)
+++||++||++|.||+|++. +... |++ ..+.+|||+++|
T Consensus 1 ltlDp~TAh~~L~lS~d~k~-v~~~~~~~~~p~~peRF~~~~~VLg~~~F 49 (49)
T PF13765_consen 1 LTLDPNTAHPSLVLSEDGKS-VRYSEQPQNYPDNPERFDHWPQVLGSEGF 49 (49)
T ss_dssp -EB-TTTS-TTEEEETTSSE-EEE-SST-S--S-TTS-SSSSEEEBS--B
T ss_pred CEECcccCCCCeEECCCCeE-EEEccCCccCCCCCCccCCcCeEEECCCC
Confidence 58999999999999977664 4322 222 246799999987
No 12
>smart00589 PRY associated with SPRY domains.
Probab=95.99 E-value=0.013 Score=39.20 Aligned_cols=40 Identities=20% Similarity=0.458 Sum_probs=27.4
Q ss_pred ceeeccCCCCCcEEEccCCeEEEEeC---------Ccc-cCcceEeeccCC
Q psy8037 56 KHAWNPEDRSLNIFVKDDDKLTFHRH---------PVA-QSTDCIRGRVGF 96 (292)
Q Consensus 56 ~~t~dp~~~~~~l~lS~d~~~~~~~~---------p~~-~~~~~Vlg~~gf 96 (292)
.+++||+++|++|.||+|++. +... |.+ ..+.+|||.++|
T Consensus 3 ~vtld~~tA~~~l~lS~d~~~-v~~~~~~~~~~~~~~rF~~~~~VL~~~~f 52 (52)
T smart00589 3 DVTLDPDTAHPYLLLSEDRRS-VRYGDLKQSLPDNPERFDSYPCVLGSQGF 52 (52)
T ss_pred CCEECcccCCCCeEECCCCCE-EEECCCCCCCCCCcccccCCCeEecCCcC
Confidence 569999999999999976654 3221 111 124578988876
No 13
>PF00622 SPRY: SPRY domain; InterPro: IPR003877 The SPRY domain is of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin []. Ca2+-release from the sarcoplasmic or endoplasmic reticulum, the intracellular Ca2+ store, is mediated by the ryanodine receptor (RyR) and/or the inositol trisphosphate receptor (IP3R).; GO: 0005515 protein binding; PDB: 2V24_A 3EK9_A 2AFJ_A 2IWG_E 3EMW_A 2WL1_A 3TOJ_B 2VOK_A 2VOL_B 2FNJ_A ....
Probab=95.15 E-value=0.043 Score=42.98 Aligned_cols=47 Identities=36% Similarity=0.574 Sum_probs=41.1
Q ss_pred cccCCCceeEEeeCCeeee-eecCCCcC-ccccceeeeeeeeeeEEEEEe
Q psy8037 236 ILDMDEGTLSFVVDGQYLG-VAFRGLKG-RKLYPIVSAVWGHCEITMKYI 283 (292)
Q Consensus 236 ~ld~~~~~l~f~~~~~~l~-~af~~l~~-~~l~~~~~~~~~~~~~~~~~~ 283 (292)
.||.+.++|.|..++..++ .+|++++. ++|||.++... .+.+.+.+-
T Consensus 73 ~lD~~~g~l~F~~ng~~~~~~~f~~~~~~~~l~P~v~~~~-~~~~~~n~g 121 (124)
T PF00622_consen 73 GLDLDNGELSFYKNGKFLGIYAFTDIDFSEPLYPAVSLGG-GQSVELNFG 121 (124)
T ss_dssp EEETTTTEEEEEETTEEEEEEEEESCTTSSSBEEEEEEES-TSEEEEEEE
T ss_pred EEeecccEEEEEECCccceeEEEECCCCCCcEEEEEEecC-CCEEEEEeC
Confidence 3799999999999999999 99999976 69999999887 777777653
No 14
>KOG1477|consensus
Probab=91.47 E-value=0.083 Score=51.93 Aligned_cols=57 Identities=21% Similarity=0.244 Sum_probs=48.3
Q ss_pred CCCccCCCEEEEEEeCCCCEEEEEECCeeeeeeeeecCCCceEEEEEeecCCeEEEEE
Q psy8037 171 DETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMK 228 (292)
Q Consensus 171 ~~~~~~~d~IGV~LD~~~GtLsFy~ng~~lg~aF~~~~~~~lyP~fs~~~~~~~v~l~ 228 (292)
|+.+..+|+|+|.+|.-.++-+|.+|+..+|++|..... -++|-+.+++.+-.++.|
T Consensus 21 g~~~~~~d~i~~~~~~~~~~~~~~~~~~~~gi~f~~~~~-~~~~dvg~~~~~~~~~~N 77 (469)
T KOG1477|consen 21 GPVFTTGDVIPCEVNTINGSDFFTKNGPDMGIAFYTPPA-LLYHDVGVVQAGEPLPAN 77 (469)
T ss_pred CCcCCccccccceEeccCCceeEEEEcCCcceeeecCcc-ccCCCcceeeCCCCCCcc
Confidence 678899999999999999999999999999999986543 268888877777777766
No 15
>smart00449 SPRY Domain in SPla and the RYanodine Receptor. Domain of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin homologues.
Probab=91.31 E-value=0.33 Score=37.98 Aligned_cols=40 Identities=48% Similarity=0.752 Sum_probs=34.8
Q ss_pred cccCCCceeEEeeCCeee-eeecCCCcC-ccccceeeeeeee
Q psy8037 236 ILDMDEGTLSFVVDGQYL-GVAFRGLKG-RKLYPIVSAVWGH 275 (292)
Q Consensus 236 ~ld~~~~~l~f~~~~~~l-~~af~~l~~-~~l~~~~~~~~~~ 275 (292)
.||++.++|.|...+..+ +.+|..+.. .+|||++|...+.
T Consensus 72 ~lD~~~g~l~F~~ng~~~~~~~f~~~~~~~~l~P~~~~~~~~ 113 (122)
T smart00449 72 FLDLEAGTISFYKNGKYLHGLAFFDVKFSGPLYPAVSLGSGC 113 (122)
T ss_pred EEECCCCEEEEEECCCEeeeEEEeccCCCCcEeeEEEcCCCC
Confidence 479999999999999999 799999964 6999999986654
No 16
>KOG2243|consensus
Probab=91.18 E-value=0.34 Score=52.41 Aligned_cols=118 Identities=25% Similarity=0.270 Sum_probs=66.9
Q ss_pred cCCeEEEEEEEeeecCCceeEEEEeeccccCCcCCcccccCCCCCeEEEEEcCC-eEEecCccCCCcccCCcC----CCC
Q psy8037 97 TKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRN-RLYHDSKNNTGLTYPTLL----KPD 171 (292)
Q Consensus 97 ssGkhYWEV~V~~~~~~~~w~vGVa~~~~~l~~~g~~~~lG~~~~swg~~~~~g-~~~h~~~~~~~~~y~~~~----~~~ 171 (292)
++-.+|+-|++-..+.....-||+.+.+..+-..+++ +..+. .-...+++. ...|.+.... ..|-.+. .++
T Consensus 1430 tst~cyyairif~gqdpa~vwvgwit~d~h~y~~~fd--l~k~~-tvtvtlgdekgkvhesikrs-ncymv~~gd~~a~~ 1505 (5019)
T KOG2243|consen 1430 TSTQCYYAIRIFAGQDPACVWVGWITPDFHLYDEGFD--LDKNC-TVTVTLGDEKGKVHESIKRS-NCYMVCAGDIMAPG 1505 (5019)
T ss_pred ccceeEEEEEEecCCCCceeEEEeecCchhhcccccC--cCcce-EEEEEeccccccHhhhhhhc-ceeEEecccccccc
Confidence 5677899999876555456789999987765333322 11111 011112211 0122211100 0110000 001
Q ss_pred C---CccCCCEEEEEEeCCCCEEEEEECCeeeeeeeeecCCCceEEEEEe
Q psy8037 172 E---TFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSA 218 (292)
Q Consensus 172 ~---~~~~~d~IGV~LD~~~GtLsFy~ng~~lg~aF~~~~~~~lyP~fs~ 218 (292)
. .-..+--|||.+|...|-|+|..||+-+|..+.--+..++||++-+
T Consensus 1506 qrs~r~n~~leigc~vd~a~gllsf~angkel~t~yqvep~tk~fpavf~ 1555 (5019)
T KOG2243|consen 1506 QRSGRNNNDLEIGCLVDAAMGLLSFIANGKELGTCYQVEPNTKLFPAVFA 1555 (5019)
T ss_pred cccCCCCCCceeeehHHhhhhhhhhhccCcccceeEeecCCccccHHHhh
Confidence 1 1123446999999999999999999999977765566789999866
No 17
>KOG2177|consensus
Probab=87.86 E-value=1.6 Score=38.72 Aligned_cols=111 Identities=25% Similarity=0.355 Sum_probs=59.5
Q ss_pred ceEeeccCCcCCeEEE-EEEEeeecCCceeEEEEeeccccCCcCCcccccCCCCCeEEEEEcCCeEEecCccCCCcccCC
Q psy8037 88 DCIRGRVGFTKGFHIW-EVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPT 166 (292)
Q Consensus 88 ~~Vlg~~gfssGkhYW-EV~V~~~~~~~~w~vGVa~~~~~l~~~g~~~~lG~~~~swg~~~~~g~~~h~~~~~~~~~y~~ 166 (292)
..+++.+.+++|.||| ||++... ....|.+|++.++.. . ...........|...... .. .+..+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~ 317 (386)
T KOG2177|consen 251 PCVLGSQVFTSGRHYWEEVEVGLK-GKEEWDLGVCLESAR---K-LLEPLSPESGFWLLGLLK-----SQ---SGKKYAA 317 (386)
T ss_pred eEecccCccCccccceeEEeccCc-cCcchhhhhhhhccc---c-ccccccCcCceEEEeeec-----CC---CCcceEE
Confidence 4555578999999999 7777653 235799999988732 1 122233344466654321 00 0001110
Q ss_pred cCCCCCCccCCCEEEEEEeCCCCEE--EEEECCeeeeeeee-ecCCCceEEEEEeec
Q psy8037 167 LLKPDETFVVPDKFLVILDMDEGTL--SFVVDGQYLGVAFR-GLKGRKLYPIVSAVW 220 (292)
Q Consensus 167 ~~~~~~~~~~~d~IGV~LD~~~GtL--sFy~ng~~lg~aF~-~~~~~~lyP~fs~~~ 220 (292)
. ......... +|++.+.+ +|+ |+ .+..+|. ..+.+++.|.++...
T Consensus 318 ~------~~~~~~~~~-l~~e~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~ 365 (386)
T KOG2177|consen 318 S------TPPLTQLVL-LDYEAGSLSISFY-NG-SLIYTFPKDSFSEPLRPVFSPGT 365 (386)
T ss_pred e------cCCcccccc-cccccceeEEEEe-CC-ceeeeccccccCCCcCceeecCc
Confidence 0 000111111 99999944 455 42 2323444 346778999988743
No 18
>PF07177 Neuralized: Neuralized; InterPro: IPR006573 NEUZ is a domain of unknown function found in neuralized proteins, i.e. proteins involved in the specification of the neuroblast during cellular differentiation. ; PDB: 2YUE_A 2E63_A.
Probab=81.70 E-value=8.7 Score=27.53 Aligned_cols=63 Identities=14% Similarity=0.179 Sum_probs=31.9
Q ss_pred eeccCCCCCcEEEccCCeEEEEeCCcccCcceEeeccCCcCCeEEEEEEEeeec--CCceeEEEEeec
Q psy8037 58 AWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQ--RGTHAVVGVGTI 123 (292)
Q Consensus 58 t~dp~~~~~~l~lS~d~~~~~~~~p~~~~~~~Vlg~~gfssGkhYWEV~V~~~~--~~~~w~vGVa~~ 123 (292)
.|.++....|+.|++| +.+..+. ......-|.++.++..|.- ++|++.... ..+...|||.+.
T Consensus 3 ~FH~~~~G~nV~L~~~-~~~A~R~-~sf~~giVFS~rPl~~~E~-~~v~I~~~~~~wsG~L~~GvT~~ 67 (69)
T PF07177_consen 3 RFHPNVHGKNVRLSND-GTVARRV-SSFNNGIVFSSRPLRIGEK-FEVRIDEVEPSWSGSLRIGVTSC 67 (69)
T ss_dssp -EEC-EE-TTEEE-SS-S-EEEES-T-SSS-EEEESS-B-TT-E-EEEEEEEE-SSSSS--EEEEESS
T ss_pred cccCcccCCCEEEcCC-CeEEEec-ccCCceEEEecCCccCCCE-EEEEEEecCCCceeEEEEeeEcc
Confidence 4555556789999954 5456552 2234568899999977753 456665432 223568898764
No 19
>PF15409 PH_8: Pleckstrin homology domain
Probab=46.18 E-value=21 Score=27.04 Aligned_cols=19 Identities=32% Similarity=0.586 Sum_probs=15.3
Q ss_pred EEEEEeCCCCEEEEEECCe
Q psy8037 180 FLVILDMDEGTLSFVVDGQ 198 (292)
Q Consensus 180 IGV~LD~~~GtLsFy~ng~ 198 (292)
==..||++.|+|+||+|..
T Consensus 17 RyFvL~~~~G~LsYy~~~~ 35 (89)
T PF15409_consen 17 RYFVLDFEKGTLSYYRNQN 35 (89)
T ss_pred EEEEEEcCCcEEEEEecCC
Confidence 3456999999999998653
No 20
>KOG2626|consensus
Probab=40.79 E-value=44 Score=33.35 Aligned_cols=88 Identities=20% Similarity=0.319 Sum_probs=55.0
Q ss_pred EECCeeeeeeeeecCCCceEEEEEe-ecCCeEEEEEEccCCC-----cc-------ccCCCceeEEeeCCeeeeeecCCC
Q psy8037 194 VVDGQYLGVAFRGLKGRKLYPIVSA-VWGHCEITMKYIGGLD-----LI-------LDMDEGTLSFVVDGQYLGVAFRGL 260 (292)
Q Consensus 194 y~ng~~lg~aF~~~~~~~lyP~fs~-~~~~~~v~l~~~~~~~-----~~-------ld~~~~~l~f~~~~~~l~~af~~l 260 (292)
|.+|..||..|... ++..|...+ ..-+..+-+.|-+.+- .+ --+...-+.|..++.+.|+||.++
T Consensus 392 f~qGDvLGf~I~LP--~~~~~~~~lp~~~kdk~lI~yK~~lyfe~~d~v~k~~k~l~~~pgS~I~f~KNG~~qG~Ay~ni 469 (544)
T KOG2626|consen 392 FGQGDVLGFYINLP--KDLSPEKYLPLTHKDKFLIKYKGHLYFEDPDNVAKIEKTLKIKPGSEIEFFKNGVSQGVAYENI 469 (544)
T ss_pred ccCCceEEEEEecC--CcccccccCCccccccceeeeeeeeEEEccchhhhhhhccccCCCceEEEeecccchhhhhhhh
Confidence 34666777666532 344443222 1113445555544332 11 123345788999999999999999
Q ss_pred cC-ccccceeeeeeeeeeEEEEEec
Q psy8037 261 KG-RKLYPIVSAVWGHCEITMKYIG 284 (292)
Q Consensus 261 ~~-~~l~~~~~~~~~~~~~~~~~~~ 284 (292)
-+ -.-||+||- |..|+++|.|-=
T Consensus 470 ~~~G~YyPaIS~-yks~tv~~nfGP 493 (544)
T KOG2626|consen 470 YKAGAYYPAISI-YKSCTVKFNFGP 493 (544)
T ss_pred hccccccceeee-cccceEEEeccc
Confidence 73 579999985 566999998753
No 21
>smart00588 NEUZ domain in neuralized proteins.
Probab=36.31 E-value=2e+02 Score=22.89 Aligned_cols=60 Identities=17% Similarity=0.068 Sum_probs=38.0
Q ss_pred CCCCCcEEEccCCeEEEEeCCcccCcceEeeccCCcCCeEEEEEEEeeecC--CceeEEEEeec
Q psy8037 62 EDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQR--GTHAVVGVGTI 123 (292)
Q Consensus 62 ~~~~~~l~lS~d~~~~~~~~p~~~~~~~Vlg~~gfssGkhYWEV~V~~~~~--~~~w~vGVa~~ 123 (292)
..+..++.|+. ++.+..+.....+...|.++.++..|.- |+|++.+... .....+||.+.
T Consensus 7 ~~~G~ni~l~~-~~~~A~R~~~~f~~givFS~rPl~~~E~-~~v~i~~~~~~w~G~l~~G~Ts~ 68 (123)
T smart00588 7 HRHGSNIRLSD-SGRVARRSASDFCNALVFSARPLRINEL-FEVKIEKVVRKWSGALRFGVTTC 68 (123)
T ss_pred cccCCCeEECC-CCcEEEcccCCcCceEEecCCCCcCCCE-EEEEEEEecCCccCceEEEEecC
Confidence 34568899994 4545655322244567888999887754 4666654322 23578999975
No 22
>PF11393 IcmL: Macrophage killing protein with similarity to conjugation protein; InterPro: IPR021055 IcmL contains two amphipathic beta-sheet regions, required for the pore-forming ability which may be related to the transfer of this protein into a host cell membrane []. The icmL gene shows significant similarity to plasmid genes involved in conjugation however IcmL is thought to be required for macrophage killing. It is unknown whether conjugation plays a role in macrophage killing [].
Probab=30.65 E-value=46 Score=25.86 Aligned_cols=21 Identities=19% Similarity=0.351 Sum_probs=16.7
Q ss_pred ceEeeccCCcCCeEEEEEEEe
Q psy8037 88 DCIRGRVGFTKGFHIWEVHWS 108 (292)
Q Consensus 88 ~~Vlg~~gfssGkhYWEV~V~ 108 (292)
.+++-.++...|+++|+|++.
T Consensus 85 ~~vi~~~g~~~G~~~W~vq~P 105 (108)
T PF11393_consen 85 APVIVEEGVNNGVYAWKVQVP 105 (108)
T ss_pred CcEEEEEeccCCeEEEEEEec
Confidence 356677777799999999974
No 23
>KOG1538|consensus
Probab=30.61 E-value=2.7e+02 Score=29.13 Aligned_cols=66 Identities=24% Similarity=0.274 Sum_probs=39.7
Q ss_pred CceeEEEEeeccccCCcC-C-----cccccCCCCCeEEEEEcCCeEEecCccCCCcccCCcCCCCCCccCCCEEEEEEeC
Q psy8037 113 GTHAVVGVGTIDAPLHSV-G-----YQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDM 186 (292)
Q Consensus 113 ~~~w~vGVa~~~~~l~~~-g-----~~~~lG~~~~swg~~~~~g~~~h~~~~~~~~~y~~~~~~~~~~~~~d~IGV~LD~ 186 (292)
|+...+|.+...+.++.+ | .++.-|.|..-|++.+.. ....+..|.+|| +|.
T Consensus 144 GqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p---------------------~sg~G~~di~aV-~DW 201 (1081)
T KOG1538|consen 144 GQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNP---------------------SSGEGRNDILAV-ADW 201 (1081)
T ss_pred CcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecC---------------------CCCCCccceEEE-Eec
Confidence 456678888776665321 1 233445666777765421 012245578888 675
Q ss_pred CCCEEEEEE-CCeeee
Q psy8037 187 DEGTLSFVV-DGQYLG 201 (292)
Q Consensus 187 ~~GtLsFy~-ng~~lg 201 (292)
..|||||. .|+..|
T Consensus 202 -~qTLSFy~LsG~~Ig 216 (1081)
T KOG1538|consen 202 -GQTLSFYQLSGKQIG 216 (1081)
T ss_pred -cceeEEEEecceeec
Confidence 46999994 787776
No 24
>COG5513 Predicted secreted protein [Function unknown]
Probab=27.22 E-value=99 Score=24.38 Aligned_cols=26 Identities=31% Similarity=0.507 Sum_probs=19.1
Q ss_pred cCCeEEEEEEEeeecCCceeEEEEeecc
Q psy8037 97 TKGFHIWEVHWSARQRGTHAVVGVGTID 124 (292)
Q Consensus 97 ssGkhYWEV~V~~~~~~~~w~vGVa~~~ 124 (292)
++|.|-|++++.+. |+.-..|+.+..
T Consensus 70 ~~G~~~W~i~av~~--G~q~v~g~Y~R~ 95 (113)
T COG5513 70 SPGIHTWEIRAVKQ--GTQQVEGTYRRL 95 (113)
T ss_pred CCceEEEEEEeecC--CceEEEEEEEEe
Confidence 57999999999875 455566776643
No 25
>PF10665 Minor_capsid_1: Minor capsid protein; InterPro: IPR019612 This entry is represented by Bacteriophage A118, Gp9. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry represents a putative tail-knob protein from Listeria phage A118.
Probab=23.30 E-value=1.3e+02 Score=23.66 Aligned_cols=50 Identities=14% Similarity=0.090 Sum_probs=26.3
Q ss_pred eeeccCCCCCcEEEccCCeEEEEeCCcccCcceEeeccCCcCCeEEEEEEE
Q psy8037 57 HAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHW 107 (292)
Q Consensus 57 ~t~dp~~~~~~l~lS~d~~~~~~~~p~~~~~~~Vlg~~gfssGkhYWEV~V 107 (292)
+-.|+..+.+.+.++++.+..+.... ..-.....-..+|+...|.|||+|
T Consensus 64 lFida~~S~p~~~~~~~skI~fdG~e-y~V~~v~~~y~~~~n~v~~yEveV 113 (114)
T PF10665_consen 64 LFIDAVNSNPFPDFTEGSKIVFDGKE-YTVTKVNPNYEPFSNKVHHYEVEV 113 (114)
T ss_pred EEEecCcCccccccCCCCEEEECCce-EEEEEEEecccCCCCCcEEEEEEE
Confidence 34566665555555544443332110 001223444456777789999987
No 26
>KOG0349|consensus
Probab=21.64 E-value=93 Score=30.73 Aligned_cols=46 Identities=33% Similarity=0.567 Sum_probs=36.2
Q ss_pred ccccCCCceeEEeeCCeeeeeecCCC---cCccccceeeeeeeeeeEEEEE
Q psy8037 235 LILDMDEGTLSFVVDGQYLGVAFRGL---KGRKLYPIVSAVWGHCEITMKY 282 (292)
Q Consensus 235 ~~ld~~~~~l~f~~~~~~l~~af~~l---~~~~l~~~~~~~~~~~~~~~~~ 282 (292)
..||.+..++.|..+++=||.||+=. ...-|||++- --|+|++.-+
T Consensus 193 CyLDld~~~v~fsKNG~~lg~AF~ip~~~kn~~lfPAvv--lkNael~fNF 241 (725)
T KOG0349|consen 193 CYLDLDSRTVWFSKNGEQLGAAFSIPVKYKNSNLFPAVV--LKNAELSFNF 241 (725)
T ss_pred EEEeccCceEEEecCccccceeEEcChhhcccccchhee--eccceEEEec
Confidence 35899999999999999999999866 4578999764 3456666544
No 27
>PF08893 DUF1839: Domain of unknown function (DUF1839); InterPro: IPR014989 This group of proteins are functionally uncharacterised.
Probab=20.99 E-value=1.2e+02 Score=28.27 Aligned_cols=43 Identities=23% Similarity=0.381 Sum_probs=31.0
Q ss_pred CEEEE-EEeCCCCEEEEEECCeee---eeeeeecCCC---------ceEEEEEeec
Q psy8037 178 DKFLV-ILDMDEGTLSFVVDGQYL---GVAFRGLKGR---------KLYPIVSAVW 220 (292)
Q Consensus 178 d~IGV-~LD~~~GtLsFy~ng~~l---g~aF~~~~~~---------~lyP~fs~~~ 220 (292)
.+||| .||.++++|.||-|..+. |--|.++|+. ++||++-...
T Consensus 123 TTI~id~iD~~ar~l~YfHn~Gy~~l~GeDy~glf~~~~~~~~~~~~l~PYvE~vk 178 (319)
T PF08893_consen 123 TTIGIDRIDPEARRLGYFHNSGYHRLEGEDYDGLFRLDPPLSEWGAPLFPYVEFVK 178 (319)
T ss_pred ceeeeeeeecccceEeeecCCceeecccCCcccccccCcccccCCCCCCCceeEee
Confidence 45665 599999999999876543 4566666532 6899987743
Done!