Query psy8041
Match_columns 101
No_of_seqs 133 out of 602
Neff 4.2
Searched_HMMs 29240
Date Fri Aug 16 16:55:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8041.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8041hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pby_A Glutaminase; secsg, rik 100.0 3.6E-51 1.2E-55 326.7 7.8 97 1-97 198-294 (308)
2 1u60_A Probable glutaminase YB 100.0 3.3E-51 1.1E-55 327.2 7.0 97 1-97 198-294 (310)
3 3voy_A Glutaminase kidney isof 100.0 3.9E-51 1.3E-55 327.5 7.1 97 1-97 202-298 (315)
4 1mki_A Probable glutaminase YB 100.0 1.3E-49 4.5E-54 320.4 7.3 97 1-97 210-316 (330)
5 3agd_A Salt-tolerant glutamina 100.0 4.3E-49 1.5E-53 327.6 8.9 97 1-97 197-293 (456)
6 3uo9_A Glutaminase kidney isof 100.0 9.5E-49 3.3E-53 329.8 7.8 97 1-97 350-446 (534)
7 3equ_A PBP-2, penicillin-bindi 97.0 0.0032 1.1E-07 52.2 9.1 82 1-82 385-495 (542)
8 3pbt_A Penicillin-binding prot 96.3 0.0078 2.7E-07 50.0 6.3 82 1-82 370-482 (538)
9 3ue3_A Septum formation, penic 96.0 0.031 1.1E-06 46.5 8.8 82 1-82 397-509 (554)
10 2v2f_F Penicillin binding prot 95.6 0.053 1.8E-06 42.6 8.1 81 2-84 214-335 (390)
11 2olv_A Penicillin-binding prot 94.5 0.12 4.2E-06 44.0 7.8 82 2-84 444-565 (669)
12 1vqq_A Saupbp2A, penicillin-bi 94.0 0.088 3E-06 44.4 5.9 82 1-83 502-611 (646)
13 4gb7_A 6-aminohexanoate-dimer 93.2 0.12 4.1E-06 40.5 5.0 80 2-83 304-393 (422)
14 3un7_A PBPA, penicillin-bindin 92.9 0.1 3.5E-06 42.0 4.4 43 1-43 313-376 (462)
15 2x02_A Beta-lactamase OXA-10; 92.6 0.087 3E-06 38.7 3.3 35 1-42 141-175 (248)
16 2wuq_A BLAB, beta-lactamase re 92.5 0.26 9E-06 36.2 5.7 42 2-43 189-233 (318)
17 2y2m_A PBP1B, penicillin-bindi 90.2 0.41 1.4E-05 39.3 5.2 83 1-85 263-381 (494)
18 2jch_A Penicillin-binding prot 89.2 0.51 1.7E-05 40.4 5.3 83 1-85 489-607 (720)
19 3fwm_A Penicillin-binding prot 88.8 0.55 1.9E-05 40.9 5.2 81 1-83 561-670 (751)
20 1qme_A Penicillin-binding prot 88.6 0.47 1.6E-05 39.9 4.5 44 1-44 406-470 (702)
21 3vsk_A Penicillin-binding prot 88.5 1.2 3.9E-05 37.1 6.8 81 2-82 482-607 (646)
22 2wad_A Penicillin-binding prot 88.2 2.4 8.1E-05 35.7 8.6 86 2-87 522-655 (680)
23 1ghp_A Beta-lactamase, penicil 82.9 1.2 3.9E-05 31.9 3.6 36 2-45 148-183 (258)
24 3lez_A Beta-lactamase; antibio 82.9 3.2 0.00011 30.6 6.2 69 3-83 150-233 (260)
25 2dcf_A 6-aminohexanoate-dimer 81.4 1.1 3.7E-05 35.1 3.2 85 2-88 270-369 (392)
26 1alq_A CP254 beta-lactamase; h 80.7 1.4 4.8E-05 32.7 3.5 34 3-44 194-227 (266)
27 1nrf_A Regulatory protein BLAR 80.6 1.5 5E-05 32.5 3.6 37 1-44 154-190 (262)
28 1m40_A TEM-1, beta-lactamase T 80.3 1.7 5.9E-05 30.9 3.8 35 2-44 155-189 (263)
29 3udf_A Penicillin-binding prot 80.1 2.1 7.3E-05 37.0 4.9 56 26-83 623-686 (731)
30 2p74_A Beta-lactamase CTX-M-9A 75.5 3.8 0.00013 28.9 4.3 35 2-44 155-189 (263)
31 1k38_A Penicillinase, beta-lac 72.9 3.1 0.00011 31.0 3.5 36 1-43 143-178 (254)
32 4euz_A Carbapenem-hydrolizing 70.7 3.9 0.00013 30.7 3.6 51 3-65 160-216 (283)
33 3qhy_A Beta-lactamase; enyzme- 70.2 2.7 9.2E-05 31.4 2.6 69 3-83 163-245 (271)
34 3zyt_A Esterase A, ESTA; hydro 67.3 3.6 0.00012 31.4 2.8 84 3-87 249-348 (372)
35 3ny4_A Beta-lactamase, penicil 66.8 5.2 0.00018 29.5 3.6 51 3-65 155-211 (265)
36 3p09_A Beta-lactamase; structu 65.4 6.9 0.00024 29.5 4.1 52 3-66 176-233 (290)
37 1n9b_A Penicillinase, beta-lac 65.4 5.4 0.00019 28.4 3.3 36 2-45 155-190 (265)
38 3dw0_A Class A carbapenemase K 65.1 8 0.00027 29.1 4.4 69 3-83 180-263 (294)
39 3hlc_A Transesterase, LOVD; al 63.5 4.7 0.00016 31.6 2.9 30 2-37 292-321 (432)
40 1e25_A Extended-spectrum beta- 63.1 8.5 0.00029 27.5 4.0 35 2-44 159-193 (282)
41 3g4p_A Beta-lactamase OXA-24; 61.7 5.8 0.0002 29.5 3.0 51 1-66 141-191 (244)
42 3hbr_A OXA-48; class D beta-la 61.4 7.7 0.00026 29.3 3.7 36 1-43 162-197 (265)
43 2qpn_A Beta-lactamase GES-1; A 60.8 9.4 0.00032 27.6 3.9 35 2-44 175-209 (287)
44 3c5a_A Class A carbapenemase K 60.0 9 0.00031 26.9 3.6 35 2-44 154-188 (264)
45 2j9o_A TLL2115 protein; penici 60.0 9.5 0.00033 28.0 3.9 34 2-43 166-199 (298)
46 2cc1_A Beta-lactamase, penicil 59.2 9 0.00031 26.8 3.5 35 2-44 153-187 (262)
47 1o7e_A L2 beta lactamase; hydr 58.0 11 0.00039 26.9 3.9 35 2-44 166-200 (276)
48 1xkz_A Regulatory protein BLAR 57.1 11 0.00036 27.5 3.7 67 2-83 151-228 (255)
49 1bue_A Protein (imipenem-hydro 57.0 10 0.00034 26.9 3.5 35 2-44 155-189 (265)
50 2iwb_A Methicillin resistance 54.7 12 0.00039 27.1 3.5 37 1-44 143-179 (246)
51 2qmi_A PBP related beta-lactam 53.8 11 0.00036 29.5 3.4 30 2-37 238-267 (447)
52 1g6a_A Beta-lactamase PSE-4; c 51.6 14 0.00048 26.1 3.5 35 2-44 158-192 (271)
53 1hzo_A Beta-lactamase; mixed a 51.3 17 0.00058 25.9 3.9 34 3-44 157-190 (271)
54 2wk0_A Beta-lactamase; hydrola 51.0 22 0.00075 25.1 4.5 36 2-45 152-187 (265)
55 1bsg_A Beta lactamase, penicil 49.7 17 0.00058 25.4 3.6 35 2-44 157-191 (266)
56 1w7f_A Beta-lactamase; hydrola 46.1 22 0.00076 26.1 3.9 36 2-45 194-229 (307)
57 1ci9_A ESTB, protein (carboxyl 43.0 17 0.00058 27.5 2.9 29 2-37 278-306 (392)
58 3i7j_A Beta-lactamase MB2281C; 38.2 24 0.00082 26.0 3.1 75 2-84 150-249 (280)
59 3isg_A Penicillinase, beta-lac 36.4 32 0.0011 25.6 3.5 36 1-43 143-178 (251)
60 3ga8_A HTH-type transcriptiona 29.2 36 0.0012 20.8 2.3 24 20-43 38-61 (78)
61 2zjr_Z 50S ribosomal protein L 28.9 17 0.00058 22.1 0.7 25 18-49 30-54 (60)
62 2bay_A PRE-mRNA splicing facto 28.5 19 0.00067 21.1 1.0 21 10-30 30-50 (61)
63 3tg9_A Penicillin-binding prot 28.2 44 0.0015 25.1 3.1 28 2-37 231-258 (356)
64 2drw_A DAA, D-amino acid amida 28.1 39 0.0013 25.4 2.8 28 3-38 247-274 (363)
65 1yqs_A D-alanyl-D-alanine carb 27.6 49 0.0017 24.7 3.2 28 2-37 241-268 (349)
66 3v2d_5 50S ribosomal protein L 25.7 15 0.00051 22.4 0.0 26 17-49 29-54 (60)
67 4ewf_A Beta-lactamase; ABA-san 25.4 82 0.0028 22.6 4.1 34 3-44 162-195 (275)
68 3cjm_A Putative beta-lactamase 24.7 1.2E+02 0.004 22.4 4.9 67 3-83 176-252 (282)
69 4dxb_A RG13, maltose-binding p 23.5 58 0.002 26.6 3.2 47 3-61 537-583 (637)
70 1ysp_A Transcriptional regulat 23.0 1.7E+02 0.0059 19.4 5.7 50 13-62 78-130 (181)
71 3q01_A Cellular tumor antigen 22.5 27 0.00092 26.7 0.9 34 47-90 8-41 (233)
72 2g7u_A Transcriptional regulat 20.7 1.9E+02 0.0064 20.7 5.2 51 12-62 157-210 (257)
No 1
>2pby_A Glutaminase; secsg, riken, structural genomics, PSI, protein structure initiative, riken structural genomics/proteomics initiative, RSGI; 2.07A {Geobacillus kaustophilus}
Probab=100.00 E-value=3.6e-51 Score=326.75 Aligned_cols=97 Identities=38% Similarity=0.616 Sum_probs=95.1
Q ss_pred CcccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeecceeeccCCceEEEEecCceEEE
Q psy8041 1 METTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLPAKSGVSGSMLVVVPNTMGIA 80 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlPaKSGVsGgIlavvPg~~gIa 80 (101)
|+|||+|||+|+++|||+|+||+||||+++++++|+++|+|+||||||+||||||+||+|+|||||||||+||||++|||
T Consensus 198 i~vt~~dLA~~~a~LAn~G~~P~tg~~vl~~~~~r~v~a~M~TcGmYd~SG~fa~~VGlPaKSGVgGGIlavvPg~~gIa 277 (308)
T 2pby_A 198 IEMTCIDLARIGLVLALDGRDPHSSEPLMPLDVARICKTFMVTCGMYNSSGEFAIKVGIPAKSGVSGGILAAVPGRCGIG 277 (308)
T ss_dssp BEECHHHHHHHHHHHHTTTBCTTTCCBSSCHHHHHHHHHHHHHSSSTTCHHHHHHHTCSCEEECTTSEEEEEETTTEEEE
T ss_pred ccccHHHHHHHHHHHhCCCcCCCCCCEEECHHHHHHHHHHHhhcCCchhHHHHHHHcCCccccccCceEEEEeCCceEEE
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCccccccceee
Q psy8041 81 LFFRTTQNVFVLFVGHR 97 (101)
Q Consensus 81 v~SP~LD~~gn~~~~~~ 97 (101)
+|||+||++|||.+|-+
T Consensus 278 v~SP~LD~~GNSv~G~~ 294 (308)
T 2pby_A 278 VFGPALDDKGNSLTGVK 294 (308)
T ss_dssp EECCCBCTTSSBHHHHH
T ss_pred EECCCCCCCCCcHHHHH
Confidence 99999999999999854
No 2
>1u60_A Probable glutaminase YBAS; structural genomics, APC5046, PSI, protein structure initiat midwest center for structural genomics, MCSG; 1.61A {Escherichia coli} SCOP: e.3.1.2
Probab=100.00 E-value=3.3e-51 Score=327.20 Aligned_cols=97 Identities=38% Similarity=0.621 Sum_probs=95.1
Q ss_pred CcccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeecceeeccCCceEEEEecCceEEE
Q psy8041 1 METTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLPAKSGVSGSMLVVVPNTMGIA 80 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlPaKSGVsGgIlavvPg~~gIa 80 (101)
|+|||+|||+||++|||+|+||+||||+++++++|+++|+|+||||||+||+|||+||+|+|||||||||+||||++|||
T Consensus 198 i~vt~~dLA~~~a~LAn~G~~P~tg~~vl~~~~~r~v~a~M~TcGmYd~SG~fa~~VGlPaKSGVgGGIlavvPg~~gIa 277 (310)
T 1u60_A 198 TLLNTIELATLGATLAAGGVNPLTHKRVLQADNVPYILAEMMMEGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGIA 277 (310)
T ss_dssp EEECHHHHHHHHHHHHTTSEETTTTEECSCGGGHHHHHHHHHHHTTGGGHHHHHHHTCSCEEECTTSEEEEEETTTEEEE
T ss_pred ccccHHHHHHHHHHHhCCCcCCCCCCEecCHHHHHHHHHHHhhcCCchhHHHHHHHcCCceeccCCceEEEEeCCceEEE
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCccccccceee
Q psy8041 81 LFFRTTQNVFVLFVGHR 97 (101)
Q Consensus 81 v~SP~LD~~gn~~~~~~ 97 (101)
||||+||++|||.+|-+
T Consensus 278 v~SP~LD~~GNSv~G~~ 294 (310)
T 1u60_A 278 AFSPPLDEDGNSVRGQK 294 (310)
T ss_dssp EECSCBCTTSCBHHHHH
T ss_pred EECCCCCCCCCcHHHHH
Confidence 99999999999999854
No 3
>3voy_A Glutaminase kidney isoform, mitochondrial; hydrolase; 2.20A {Homo sapiens} PDB: 3czd_A 3voz_A* 3vp0_A* 3vp1_A* 3vp2_A 3vp3_A 3vp4_A
Probab=100.00 E-value=3.9e-51 Score=327.46 Aligned_cols=97 Identities=62% Similarity=0.994 Sum_probs=95.1
Q ss_pred CcccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeecceeeccCCceEEEEecCceEEE
Q psy8041 1 METTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLPAKSGVSGSMLVVVPNTMGIA 80 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlPaKSGVsGgIlavvPg~~gIa 80 (101)
|+|||+|||+||++|||+|+||+||||+++++++|+++|+|+||||||+||+|||+||+|+|||||||||+|+||++|||
T Consensus 202 i~vt~~dLA~~~a~LAn~G~~P~tg~~vl~~~~~r~v~alM~TcGmYd~SG~fa~~VGlPaKSGVgGGIlavvPg~~gIa 281 (315)
T 3voy_A 202 IEVTCESASVMAATLANGGFCPITGERVLSPEAVRNTLSLMHSCGMYDFSGQFAFHVGLPAKSGVAGGILLVVPNVMGMM 281 (315)
T ss_dssp EEECHHHHHHHHHHHHTTTBCTTTCCBCSCHHHHHHHHHHHHHHSSGGGHHHHHHHTCSCEEECTTSEEEEEETTTEEEE
T ss_pred ccccHHHHHHHHHHHHcCCcCCCCCCEecCHHHHHHHHHHHhHcCCcchHHHHHHHcCCcccccccceEEEEeCCCcEEE
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCccccccceee
Q psy8041 81 LFFRTTQNVFVLFVGHR 97 (101)
Q Consensus 81 v~SP~LD~~gn~~~~~~ 97 (101)
+|||+||++|||.+|-+
T Consensus 282 v~SP~LD~~GNSv~G~~ 298 (315)
T 3voy_A 282 CWSPPLDKMGNSVKGIH 298 (315)
T ss_dssp EECSEECTTSCBHHHHH
T ss_pred EECCCCCCCCCcHHHHH
Confidence 99999999999999854
No 4
>1mki_A Probable glutaminase YBGJ; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; HET: SEP; 2.00A {Bacillus subtilis} SCOP: e.3.1.2 PDB: 2osu_A* 3brm_A* 3agf_A
Probab=100.00 E-value=1.3e-49 Score=320.44 Aligned_cols=97 Identities=37% Similarity=0.618 Sum_probs=95.2
Q ss_pred CcccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeecceeeccCCceEEEEec------
Q psy8041 1 METTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLPAKSGVSGSMLVVVP------ 74 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlPaKSGVsGgIlavvP------ 74 (101)
|+|||+|||+|+++|||+|+||+||||+++++++|+++|+|+||||||+||+|||+||+|+|||||||||+|||
T Consensus 210 i~vt~~dLA~~~a~LAn~G~~P~tge~vi~~~~~r~v~alM~TCGmYd~SGefa~~VGlPaKSGVgGGIlavvP~~~~~~ 289 (330)
T 1mki_A 210 MESTTEDIALIGLILAHDGYHPIRHEQVIPKDVAKLAKALMLTCGMYNASGKYAAFVGVPAKSGVSGGIMALVPPSARRE 289 (330)
T ss_dssp BEECHHHHHHHHHHHHTTTEETTTTEECSCHHHHHHHHHHHHHHTTGGGHHHHHHHTCSCEEECTTSEEEEEECTTTTCS
T ss_pred hhcCHHHHHHHHHHHhCCCcCCCCCCEEECHHHHHHHHHHHhhcCCchhHHHHHHHcCCceeccccceEEEEeccccccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ----CceEEEEEcCCCCccccccceee
Q psy8041 75 ----NTMGIALFFRTTQNVFVLFVGHR 97 (101)
Q Consensus 75 ----g~~gIav~SP~LD~~gn~~~~~~ 97 (101)
|++|||+|||+||++|||.+|-+
T Consensus 290 ~~~~g~~gIav~SP~LD~~GNSv~G~~ 316 (330)
T 1mki_A 290 QPFQSGCGIGIYGPAIDEYGNSLTGGM 316 (330)
T ss_dssp STTTTCEEEEEECSCBCTTSSBHHHHH
T ss_pred ccccCCeeEEEECCCCCCCCCcHHHHH
Confidence 99999999999999999999854
No 5
>3agd_A Salt-tolerant glutaminase; glutaminase super family, hydrolase; 2.20A {Micrococcus luteus} PDB: 3age_A* 3if5_A 3ih8_A 3ih9_A 3iha_A* 3ihb_A 2dfw_A
Probab=100.00 E-value=4.3e-49 Score=327.60 Aligned_cols=97 Identities=41% Similarity=0.616 Sum_probs=95.1
Q ss_pred CcccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeecceeeccCCceEEEEecCceEEE
Q psy8041 1 METTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLPAKSGVSGSMLVVVPNTMGIA 80 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlPaKSGVsGgIlavvPg~~gIa 80 (101)
|+|||+|||+|+++|||+|+||+|||++++++++|+++|+|+||||||+||+|||+||||+|||||||||+||||+||||
T Consensus 197 i~vtc~dLA~maatLAN~Gv~P~Tge~vls~~~~r~v~alM~TCGmYD~SGefA~rVGLPaKSGVgGGIlaVVPg~~GIa 276 (456)
T 3agd_A 197 VLVTVKDLAVMGACLATGGIHPMTGERMLPSIVARRVVSVMTSSGMYDAAGQWLADVGIPAKSGVAGGVLGALPGRVGIG 276 (456)
T ss_dssp BEECHHHHHHHHHHHHTTSBCTTTCCBCSCHHHHHHHHHHHHHHTTTTSSSCHHHHTCCCEEECTTSEEEEEETTTEEEE
T ss_pred ccccHHHHHHHHHHHhCCCcCCCCCCEEECHHHHHHHHHHHhhcCCchhHHHHHHHcCCceeccccceEEEEeCCceEEE
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCccccccceee
Q psy8041 81 LFFRTTQNVFVLFVGHR 97 (101)
Q Consensus 81 v~SP~LD~~gn~~~~~~ 97 (101)
||||+||++|||.+|-+
T Consensus 277 v~SP~LD~~GNSvrG~~ 293 (456)
T 3agd_A 277 VFSPRLDEVGNSARGVL 293 (456)
T ss_dssp EECSCBCTTSSBHHHHH
T ss_pred EECCCCCCCCCcHHHHH
Confidence 99999999999999854
No 6
>3uo9_A Glutaminase kidney isoform, mitochondrial; hydrolase-hydrolase inhibitor complex; HET: 04A; 2.30A {Homo sapiens} PDB: 3unw_A* 3ss3_A 3ss4_A 3ss5_A*
Probab=100.00 E-value=9.5e-49 Score=329.83 Aligned_cols=97 Identities=62% Similarity=0.994 Sum_probs=95.0
Q ss_pred CcccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeecceeeccCCceEEEEecCceEEE
Q psy8041 1 METTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLPAKSGVSGSMLVVVPNTMGIA 80 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlPaKSGVsGgIlavvPg~~gIa 80 (101)
|+|||+|||+||++|||+|+||+||||+++++++|+++|+|+||||||+||+|||+||||+|||||||||+||||++|||
T Consensus 350 I~vtc~dLA~mgatLAN~Gv~P~Tgervls~~~vr~vlalM~TCGmYD~SGefA~rVGLPaKSGVgGGIlaVVPg~~GIa 429 (534)
T 3uo9_A 350 IEVTCESASVMAATLANGGFCPITGERVLSPEAVRNTLSLMHSCGMYDFSGQFAFHVGLPAKSGVAGGILLVVPNVMGMM 429 (534)
T ss_dssp EEECHHHHHHHHHHHHTTTBCTTTCCBCSCHHHHHHHHHHHHHHSSGGGHHHHHHHTCSCEEECTTSEEEEEETTTEEEE
T ss_pred ccccHHHHHHHHHHHHcCCcCCCCCCEecCHHHHHHHHHHHhHcCCcchHHHHHHHcCCcccccccceEEEEeCCCcEEE
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCccccccceee
Q psy8041 81 LFFRTTQNVFVLFVGHR 97 (101)
Q Consensus 81 v~SP~LD~~gn~~~~~~ 97 (101)
||||+||++|||.+|-+
T Consensus 430 v~SP~LD~~GNSvrG~~ 446 (534)
T 3uo9_A 430 CWSPPLDKMGNSVKGIH 446 (534)
T ss_dssp EECSCBCTTSCBHHHHH
T ss_pred EECCCCCCCCCcHHHHH
Confidence 99999999999999854
No 7
>3equ_A PBP-2, penicillin-binding protein 2; class B transpeptidase, cell DIV cell inner membrane, cell membrane, cell shape; HET: SEP; 2.40A {Neisseria gonorrhoeae} PDB: 3eqv_A*
Probab=97.03 E-value=0.0032 Score=52.16 Aligned_cols=82 Identities=17% Similarity=0.281 Sum_probs=58.8
Q ss_pred CcccHHHHHHHHHHHhCCCC----------CCCCCceeechhhHHHHHHHHHhhccccccccceeeecce--eeccCC--
Q psy8041 1 METTCESFSVIAATLANGGI----------CPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLP--AKSGVS-- 66 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~----------~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlP--aKSGVs-- 66 (101)
+.+|.-|||.+.++|||+|+ .+..+++++++++++.+..+|...=-.+..|..+.--|.| +|+|-+
T Consensus 385 ~~vTPlqma~a~a~iANgG~~~~p~lv~~~~~~~~~~v~s~~~a~~v~~~m~~vv~~~GTg~~a~~~g~~vaGKTGTaq~ 464 (542)
T 3equ_A 385 LQLSLLQLARAYTALTHDGVLLPLSFEKQAVAPQGKRIFKESTAREVRNLMVSVTEPGGTGTAGAVDGFDVGAKTGTARK 464 (542)
T ss_dssp CBBCHHHHHHHHHHHHTTTEECCCBSBCCSSCCCCEECSCHHHHHHHHHHHHHHHSTTSSCGGGCCTTSCCEEEEEEC--
T ss_pred cccCHHHHHHHHHHHhcCCeEeCcEEEecccCcCCccCCCHHHHHHHHHHHHHHhcCCCeeEeecCCCCEEEEEeeccee
Confidence 46899999999999999993 3346789999999999999998763223455544333433 788864
Q ss_pred ------------ceEEEEecC---ceEEEEE
Q psy8041 67 ------------GSMLVVVPN---TMGIALF 82 (101)
Q Consensus 67 ------------GgIlavvPg---~~gIav~ 82 (101)
.-.++..|- +..++||
T Consensus 465 ~~~g~y~~~~~~awFvG~aP~~~P~~~v~V~ 495 (542)
T 3equ_A 465 FVNGRYADNKHVATFIGFAPAKNPRVIVAVT 495 (542)
T ss_dssp ---------CCEEEEEEEESSSSCCEEEEEE
T ss_pred cCCCCCCCCCcEEEEEEEEECCCCeEEEEEE
Confidence 235666773 5677776
No 8
>3pbt_A Penicillin-binding protein 3; PBP3, hydrolase-antibiotic complex; HET: UE1; 1.64A {Pseudomonas aeruginosa} PDB: 3pbn_A* 3pbo_A* 3pbr_A* 3pbs_A* 3pbq_A* 4fsf_A* 3oc2_A 3ocl_A* 3ocn_A*
Probab=96.25 E-value=0.0078 Score=50.00 Aligned_cols=82 Identities=18% Similarity=0.148 Sum_probs=56.0
Q ss_pred CcccHHHHHHHHHHHhCCCC----------CCCCCceeechhhHHHHHHHHHhhccccccccceeeecce--eeccCC--
Q psy8041 1 METTCESFSVIAATLANGGI----------CPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLP--AKSGVS-- 66 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~----------~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlP--aKSGVs-- 66 (101)
+.+|.-|||.+.++|||+|+ .+...++++++++++.+..+|...=-.+..|.-+.--|.+ +|+|-+
T Consensus 370 ~~vTPlqmA~a~aaiANgG~~~~P~lv~~~~~~~~~~vis~~~a~~v~~~m~~Vv~~~GTg~~a~~~g~~vaGKTGTaq~ 449 (538)
T 3pbt_A 370 LSVTAIQLAHAYAALANDGKSVPLSMTRVDRVPDGVQVISPEVASTVQGMLQQVVEAQGGVFRAQVPGYHAAGKSGTARK 449 (538)
T ss_dssp CBBCHHHHHHHHHHHHTTTEECCCBSBCCSSCCCCEECSCHHHHHHHHHHHHHHHHSTTSCGGGCBTTBCCEEEEEEEEC
T ss_pred CCCCHHHHHHHHHHHhcCCeEeccEEEeccCCccCccCCCHHHHHHHHHHHHHHhcCCCceeeccCCCCeEEEEecccCc
Confidence 36899999999999999993 3445788999999999999997653223444443322332 677742
Q ss_pred --------------ceEEEEecC---ceEEEEE
Q psy8041 67 --------------GSMLVVVPN---TMGIALF 82 (101)
Q Consensus 67 --------------GgIlavvPg---~~gIav~ 82 (101)
.-.++..|- +..++||
T Consensus 450 ~~~~~~~y~~~~~~awFvG~aP~~~P~~~vaV~ 482 (538)
T 3pbt_A 450 VSVGTKGYRENAYRSLFAGFAPATDPRIAMVVV 482 (538)
T ss_dssp ----------CCEEEEEEEEESSSSCCEEEEEE
T ss_pred CCcCCCcccCCCceEEEEEEeeCCCCCEEEEEE
Confidence 235566662 5567776
No 9
>3ue3_A Septum formation, penicillin binding protein 3, peptidoglycan synthetase; transpeptidase, transferase; 2.30A {Acinetobacter}
Probab=96.03 E-value=0.031 Score=46.53 Aligned_cols=82 Identities=20% Similarity=0.231 Sum_probs=56.1
Q ss_pred CcccHHHHHHHHHHHhCCCCC--C--------CCCceeechhhHHHHHHHHHhhccccccccceeeecce--eeccCC--
Q psy8041 1 METTCESFSVIAATLANGGIC--P--------ITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLP--AKSGVS-- 66 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~~--p--------~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlP--aKSGVs-- 66 (101)
+.+|.-|||.+.++|||+|+- | ..+++++++++++.+..+|...=--+..|..+.--|.+ +|+|-.
T Consensus 397 ~~vTPlqmA~a~aaiANgG~~~~P~lv~~~~~~~~~~vis~~~a~~v~~~m~~Vv~~~GTg~~a~~~g~~vaGKTGTAq~ 476 (554)
T 3ue3_A 397 LNATILQLAQGYAMLANHGVEMPLSLHKLDQVPEGRQVLDPKIADQVLMMLEQVTLPGGTAKQAVIPGYRVGGKTGTAHK 476 (554)
T ss_dssp SBBCHHHHHHHHHHHTTTTEECCCBSBCCSSCCCCEECSCHHHHHHHHHHHHHHTSTTCSCGGGCBTTBCCEEEEEEEEC
T ss_pred cCcCHHHHHHHHHHHhcCCeEeccEEEEeccCCCCccCCCHHHHHHHHHHHHHhhcCCCceeeccCCCCEEEEEeccccc
Confidence 368999999999999999952 1 15678999999999999998752113344444322332 676641
Q ss_pred --------------ceEEEEec---CceEEEEE
Q psy8041 67 --------------GSMLVVVP---NTMGIALF 82 (101)
Q Consensus 67 --------------GgIlavvP---g~~gIav~ 82 (101)
.-.++..| -+..++||
T Consensus 477 ~~~~~g~y~~~~~~awFvG~aP~~~P~~~v~V~ 509 (554)
T 3ue3_A 477 LRADRKGYSNSEYRALFAGVAPVSDPRLAMIVV 509 (554)
T ss_dssp CCTTCSSCCSSSEEEEEEEEECTTSCCEEEEEE
T ss_pred CCcCCCccCCCCceEEEEEEEECCCCCEEEEEE
Confidence 23666777 46677777
No 10
>2v2f_F Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc6_B* 2zc5_B* 2c6w_B 2c5w_B*
Probab=95.59 E-value=0.053 Score=42.56 Aligned_cols=81 Identities=19% Similarity=0.243 Sum_probs=54.9
Q ss_pred cccHHHHHHHHHHHhCCCCC--C-----------------CCCceeechhhHHHHHHHHHhhccccccccceeeec--ce
Q psy8041 2 ETTCESFSVIAATLANGGIC--P-----------------ITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVG--LP 60 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~--p-----------------~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VG--lP 60 (101)
.+|.-|||.+.++|||+|+- | ...++++++++++.+..+|...=- +..|.-+.--| +=
T Consensus 214 ~vTplqma~aya~iANgG~~~~P~~v~~i~~~~g~~~~~~~~~~~v~s~~~a~~v~~~L~~vv~-~Gtg~~a~~~g~~va 292 (390)
T 2v2f_F 214 GASSEKMAAAYAAFANGGIYHKPMYINKVVFSDGSKKEFSDVGTRAMKETTAYMMTEMMKTVLA-YGTGRGAYLPWLAQA 292 (390)
T ss_dssp SCCHHHHHHHHHHHHTTSEECCCBCEEEEEETTSCEEECCCCCEECSCHHHHHHHHHHHHHHHH-TSTTGGGCCTTSCCE
T ss_pred CCCHHHHHHHHHHHHcCCEEecCEEEEEEECCCCCEEecCCCCcccCCHHHHHHHHHHHHHHHh-cCceeeccCCCCeeE
Confidence 57999999999999999851 1 124678999999999999974311 22333332122 23
Q ss_pred eeccCC--------------------ceEEEEecCceEEEEEcC
Q psy8041 61 AKSGVS--------------------GSMLVVVPNTMGIALFFR 84 (101)
Q Consensus 61 aKSGVs--------------------GgIlavvPg~~gIav~SP 84 (101)
+|+|-+ .-.++..| +..++||-.
T Consensus 293 GKTGTa~~~~~~~~~~~~~~~~~~~~awFvG~~P-~~~~aV~vg 335 (390)
T 2v2f_F 293 GKTGTSNYTDDEIEKHIKNTGYVAPDEMFVGYTR-KYSMAVWTG 335 (390)
T ss_dssp EEEEECCCCC-----------CCBSEEEEEEECS-SEEEEEEEE
T ss_pred EEccCCCCCCcccccccccccCCcCceEEEEeCC-CcEEEEEEE
Confidence 777753 23777788 568888853
No 11
>2olv_A Penicillin-binding protein 2; transpeptidase fold, glycosyltransferase family 51, lysozyme transferase; HET: M0E; 2.80A {Staphylococcus aureus} SCOP: d.2.1.10 e.3.1.1 PDB: 2olu_A* 3dwk_A*
Probab=94.48 E-value=0.12 Score=43.98 Aligned_cols=82 Identities=17% Similarity=0.113 Sum_probs=56.8
Q ss_pred cccHHHHHHHHHHHhCCCC--CCC-----------------CCceeechhhHHHHHHHHHhhccccccccceeeecc--e
Q psy8041 2 ETTCESFSVIAATLANGGI--CPI-----------------TEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGL--P 60 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~--~p~-----------------tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGl--P 60 (101)
++|.-|||.+.++|||+|+ .|. ..++++++++++.+..+|...=--+..|..+.--|. -
T Consensus 444 ~vTplqmA~ayaa~ANgG~~~~P~~v~~i~d~~G~~~~~~~~~~~vis~~~a~~v~~~L~~Vv~~~GTg~~a~~~g~~vA 523 (669)
T 2olv_A 444 EFSPTQLASAFAAIANGGTYNNAHSIQKVVTRDGETIEYDHTSHKAMSDYTAYMLAEMLKGTFKPYGSAYGHGVSGVNMG 523 (669)
T ss_dssp EECHHHHHHHHHHHHTTSEEECCBCEEEEECTTSCEEECCCCEEECSCHHHHHHHHHHHGGGSSTTSTTTTCCCSSCCCE
T ss_pred CCCHHHHHHHHHHHHcCCEEeccEEEEEEEcCCCCEeecCccccccCCHHHHHHHHHHHHHhhcCCCceecccCCCCeEE
Confidence 5799999999999999985 121 235789999999999999754110344555443343 3
Q ss_pred eeccCC-------------------ceEEEEecCceEEEEEcC
Q psy8041 61 AKSGVS-------------------GSMLVVVPNTMGIALFFR 84 (101)
Q Consensus 61 aKSGVs-------------------GgIlavvPg~~gIav~SP 84 (101)
+|+|-+ .-.++..| +..++||--
T Consensus 524 GKTGTa~~~~~~~~~y~~~~~~~~daWFvG~tP-~~~vaVwvg 565 (669)
T 2olv_A 524 AKTGTGTYGAETYSQYNLPDNAAKDVWINGFTP-QYTMSVWMG 565 (669)
T ss_dssp EEEEEECCCHHHHHHTTCCTTEESEEEEEEECS-SEEEEEEEE
T ss_pred EEeccCccCCccccccccccCCCceEEEEEEcC-ceEEEEEEE
Confidence 788853 23677778 568899853
No 12
>1vqq_A Saupbp2A, penicillin-binding protein MECA, low-affinity; beta-lactam, D- transpeptidase, D-carboxypeptidase, biosynthetic protein; 1.80A {Staphylococcus aureus} SCOP: d.17.4.5 d.175.1.1 e.3.1.1 PDB: 1mwu_A* 1mwr_A 1mws_A* 1mwt_A*
Probab=94.00 E-value=0.088 Score=44.41 Aligned_cols=82 Identities=17% Similarity=0.167 Sum_probs=52.3
Q ss_pred CcccHHHHHHHHHHHhCCCC--CC---------CCCceeechhhHHHHHHHHHhhcccccccccee-eecceeeccCC--
Q psy8041 1 METTCESFSVIAATLANGGI--CP---------ITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAF-KVGLPAKSGVS-- 66 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~--~p---------~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~-~VGlPaKSGVs-- 66 (101)
+.+|.-|||.+.++|||+|+ .| ...++++++++++.+..+|...=-....|..+. ..-+=+|+|-.
T Consensus 502 ~~vTPlqmA~a~aaiAN~G~~~~P~lv~~~~~~~~~~~vis~~~a~~v~~~m~~Vv~~~GTg~~a~~~~~vaGKTGTaq~ 581 (646)
T 1vqq_A 502 ILINPVQILSIYSALENNGNINAPHLLKDTKNKVWKKNIISKENINLLTDGMQQVVNKTHKEDIYRSYANLIGKSGTAEL 581 (646)
T ss_dssp CBBCHHHHHHHHHGGGTTTCEECCBCBTTSCCCEEECCCSCHHHHHHHHHHHHHHHHTTTTTTTCCTTSCEEEEEEEEEC
T ss_pred cccCHHHHHHHHHHHhcCCeEeeeEEEecCCCCccccCCCCHHHHHHHHHHHHHHhcCCCceecccCCceEEEEeeccee
Confidence 46899999999999999985 11 113578999999999999975421112333221 12233777743
Q ss_pred -----------ceEEEEec---CceEEEEEc
Q psy8041 67 -----------GSMLVVVP---NTMGIALFF 83 (101)
Q Consensus 67 -----------GgIlavvP---g~~gIav~S 83 (101)
+-.++. | .+..++||-
T Consensus 582 ~~~~~~~~~~~awFvG~-p~~~P~~avaV~v 611 (646)
T 1vqq_A 582 KMKQGETGRQIGWFISY-DKDNPNMMMAINV 611 (646)
T ss_dssp C------CCEEEEEEEE-ETTSCSCEEEEEE
T ss_pred CCCCCCCCccEEEEEEE-eCCCCcEEEEEEE
Confidence 224555 6 566777774
No 13
>4gb7_A 6-aminohexanoate-dimer hydrolase; structural genomics, IDP05595, national institute of allergy and infectious diseases; HET: MSE; 1.60A {Bacillus anthracis}
Probab=93.16 E-value=0.12 Score=40.51 Aligned_cols=80 Identities=18% Similarity=0.215 Sum_probs=50.7
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceee---------ecceeeccCCceEEEE
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFK---------VGLPAKSGVSGSMLVV 72 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~---------VGlPaKSGVsGgIlav 72 (101)
-.|.+|+|+++..+.|+|. +.|+|+|+++.++...+.-..---+.....+.|. -|.=..+|.+|-.+.|
T Consensus 304 ~sta~D~arfg~l~l~~G~--~~g~qil~~~~v~~~~~~~~~~~~~~~~~~~~YG~~ww~~~~~~~~~~~~G~~Gq~i~v 381 (422)
T 4gb7_A 304 NATARDMARFGQLLLNNGE--YNGKQILPSSITEDIKNVQEGELAIGPGASISYHNQWWIPHNEQGAFEVLGSYGQTLYI 381 (422)
T ss_dssp EECHHHHHHHHHHHHTTTE--ETTEESSCTHHHHHHHTCCTTSSBSSTTCSCEEETTEEECCCTTCCEEEEETTTEEEEE
T ss_pred ecCHHHHHHHHHHHHcCCc--cCCeEecCHHHHHHHhccCCCCcccCCCCCCCCCcceeecCCCCCeEEEEccCCeEEEE
Confidence 3689999999999999996 5799999999887643221110000011111111 1222456889988899
Q ss_pred ecCce-EEEEEc
Q psy8041 73 VPNTM-GIALFF 83 (101)
Q Consensus 73 vPg~~-gIav~S 83 (101)
.|.+- .|..+|
T Consensus 382 dP~~~lviV~ls 393 (422)
T 4gb7_A 382 DPKAKMVIVHFS 393 (422)
T ss_dssp ETTTTEEEEEEE
T ss_pred EecCCEEEEEeC
Confidence 99875 455565
No 14
>3un7_A PBPA, penicillin-binding protein A; transpeptidase, peptidoglycan, B lactam, transferase; 2.00A {Mycobacterium tuberculosis} PDB: 3upn_A* 3upo_A* 3upp_A* 3lo7_A
Probab=92.92 E-value=0.1 Score=42.00 Aligned_cols=43 Identities=30% Similarity=0.399 Sum_probs=35.3
Q ss_pred CcccHHHHHHHHHHHhCCCC--CC-------------------CCCceeechhhHHHHHHHHHh
Q psy8041 1 METTCESFSVIAATLANGGI--CP-------------------ITEEKVLRSESVRDVLSLMHS 43 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~--~p-------------------~tge~vl~~~~~r~v~alM~t 43 (101)
+.+|.-|||.+.++|||+|+ .| ...++++++++++.+..+|..
T Consensus 313 ~~vTPLqmA~a~aaiANgG~~~~P~lV~~i~~~~g~~~~~~~~~~~~~vis~~~a~~~~~~m~~ 376 (462)
T 3un7_A 313 VALTPLANAEIAATIANGGITMRPYLVGSLKGPDLANISTTVRYQQRRAVSPQVAAKLTELMVG 376 (462)
T ss_dssp CBBCHHHHHHHHHHHHTTTEEECCBSEEEEECTTCCEEEECCCCEEEECSCHHHHHHHHHHHHH
T ss_pred eeeeHHHHHHHhhhhcCCCeecccEEEEEEEcCCCceeecccccccccccCHHHHHHHHHHHHh
Confidence 46899999999999999996 22 224578999999999999964
No 15
>2x02_A Beta-lactamase OXA-10; class D, hydrolase, antibiotic resistance; HET: KCX PG4; 1.35A {Pseudomonas aeruginosa} PDB: 1k4e_A* 1k6r_A* 1k6s_A* 1k4f_A* 2x01_A* 2wgv_A* 2wgw_A* 2wkh_A* 2wki_A 2rl3_A* 2hpb_A 2hp9_A 2hp6_A 2wgi_A* 2hp5_A 1fof_A 1k55_A* 1e4d_A* 1ewz_A 1k54_A* ...
Probab=92.63 E-value=0.087 Score=38.70 Aligned_cols=35 Identities=9% Similarity=-0.081 Sum_probs=31.9
Q ss_pred CcccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHH
Q psy8041 1 METTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMH 42 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~ 42 (101)
+.+|..|+|.+.+.|||+| +++++++.+.+..+|.
T Consensus 141 ~~~Tpl~ma~~~~~ian~g-------~~~s~~~~~~~~~~m~ 175 (248)
T 2x02_A 141 LRISAVNQVEFLESLYLNK-------LSASKENQLIVKEALV 175 (248)
T ss_dssp CCEEHHHHHHHHHHHHTTC-------SSSCHHHHHHHHHHTE
T ss_pred cccCHHHHHHHHHHHHcCC-------cCCCHHHHHHHHHhhc
Confidence 3689999999999999998 5799999999999998
No 16
>2wuq_A BLAB, beta-lactamase regulatory protein BLAB; class A beta-lactamase fold, transcription regulation, beta-lactamase induction, transcription; 1.80A {Streptomyces cacaoi}
Probab=92.46 E-value=0.26 Score=36.22 Aligned_cols=42 Identities=21% Similarity=0.238 Sum_probs=30.9
Q ss_pred cccHHHHHHHHHHHhCC---CCCCCCCceeechhhHHHHHHHHHh
Q psy8041 2 ETTCESFSVIAATLANG---GICPITEEKVLRSESVRDVLSLMHS 43 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~---G~~p~tge~vl~~~~~r~v~alM~t 43 (101)
.+|..|+|++.+.|+|+ ...|...+++++++..+.++.+|..
T Consensus 189 ~~Tp~d~a~~~~~l~~~~~~~~~~~~~~~~ls~~~~~~l~~~m~~ 233 (318)
T 2wuq_A 189 TGTARAFVDLLEALWAPVLTGPRPGRTSRALPPEPAARLRELMAA 233 (318)
T ss_dssp EECHHHHHHHHHHHHGGGCCCC-------CCCHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHcCCccccccccccccCCHHHHHHHHHHHhc
Confidence 47999999999999998 1123334478999999999999986
No 17
>2y2m_A PBP1B, penicillin-binding protein 1B; transferase, infection, cell WALL, peptidoglycan, inhibitor; HET: E08; 1.62A {Streptococcus pneumoniae} PDB: 2y2g_A* 2y2h_A* 2y2j_A* 2y2k_A* 2y2l_A* 2y2i_A* 2y2n_A* 2y2o_A* 2y2p_A* 2y2q_A* 2uwy_A* 2xd1_A* 2bg1_A 2xd5_A* 2uwx_A* 2fff_B
Probab=90.17 E-value=0.41 Score=39.26 Aligned_cols=83 Identities=14% Similarity=0.156 Sum_probs=54.4
Q ss_pred CcccHHHHHHHHHHHhCCCC-----------CC---------CCCceeechhhHHHHHHHHHhhccccccccc--e----
Q psy8041 1 METTCESFSVIAATLANGGI-----------CP---------ITEEKVLRSESVRDVLSLMHSCGMYDYSGQF--A---- 54 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~-----------~p---------~tge~vl~~~~~r~v~alM~tcGmYd~SG~f--a---- 54 (101)
+++|..|||.+.++|||+|+ ++ ...+++++++++..+..+|...=- +..|.. +
T Consensus 263 ~~vTplqma~aya~~ANgG~~~~P~~i~~i~d~~G~~i~~~~~~~~~v~s~~~a~~v~~~L~~vv~-~Gtg~~~~~~~~~ 341 (494)
T 2y2m_A 263 IEVTVAQHTNGYQTLANNGVYHQKHVISKIEAADGRVVYEYQDKPVQVYSKATATIMQGLLREVLS-SRVTTTFKSNLTS 341 (494)
T ss_dssp CCBCHHHHHHHHHHHHTTTEECCCBSEEEEECTTCCEEEECCCCCEECSCHHHHHHHHHHHHHHHH-HTSSCCHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHcCCEEeCCEEEEEEEcCCCCEEeccCCCccCCCCHHHHHHHHHHHHhhhh-cCCcccccccccc
Confidence 46899999999999999994 21 124578999999999999974311 112221 0
Q ss_pred -----eeecceeeccCC-----ceEEEEecCceEEEEEcCC
Q psy8041 55 -----FKVGLPAKSGVS-----GSMLVVVPNTMGIALFFRT 85 (101)
Q Consensus 55 -----~~VGlPaKSGVs-----GgIlavvPg~~gIav~SP~ 85 (101)
...-+-+|+|-+ .=.++..| ...++||--.
T Consensus 342 ~~~~~~~~~vAGKTGTa~~~~daWFvGytp-~~~~~VwvG~ 381 (494)
T 2y2m_A 342 LNPTLANADWIGKTGTTGQDENMWLMLSTP-RLTLGGWIGH 381 (494)
T ss_dssp HCHHHHTSCCEEEEEECTTSCEEEEEEECS-SEEEEEEEEC
T ss_pred ccccccCCceEEeeccCCCCCCeEEEEECC-CEEEEEEEec
Confidence 011233788864 23566777 4578888654
No 18
>2jch_A Penicillin-binding protein 1B; peptidoglycan synthesis multifunctional enzyme, cell WALL, peptidoglycan, gamma lactam antibiotics; HET: PL7; 2.4A {Streptococcus pneumoniae} PDB: 2jci_A* 2je5_A*
Probab=89.24 E-value=0.51 Score=40.45 Aligned_cols=83 Identities=14% Similarity=0.142 Sum_probs=54.5
Q ss_pred CcccHHHHHHHHHHHhCCCC-----------CC---------CCCceeechhhHHHHHHHHHhhccccccccce------
Q psy8041 1 METTCESFSVIAATLANGGI-----------CP---------ITEEKVLRSESVRDVLSLMHSCGMYDYSGQFA------ 54 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~-----------~p---------~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa------ 54 (101)
+++|.-|||.+.++|||+|+ ++ ...+++++++++..+..+|...= -+..|..+
T Consensus 489 ~~vTplqma~ayat~ANgG~~~~P~~I~~i~d~~G~~i~~~~~~~~~vis~~ta~~~~~~L~~Vv-~~Gtg~~~~~~~~~ 567 (720)
T 2jch_A 489 IEVTVAQHTNGYQTLANNGVYHQKHVISKIEAADGRVVYEYQDKPVQVYSKATATIMQGLLREVL-SSRVTTTFKSNLTS 567 (720)
T ss_dssp CCBCHHHHHHHHHHHHTTTEECCCBSEEEEECTTSCEEEECCCCCEESSCHHHHHHHHHHHHHHH-HHCSSCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHcCCeecccEEEEEEEcCCCCEEeecCCCcccCCCHHHHHHHHHHHHhhh-hcCCcccchhcccc
Confidence 46899999999999999995 21 12357899999999999997431 11122210
Q ss_pred -----eeecceeeccCC-----ceEEEEecCceEEEEEcCC
Q psy8041 55 -----FKVGLPAKSGVS-----GSMLVVVPNTMGIALFFRT 85 (101)
Q Consensus 55 -----~~VGlPaKSGVs-----GgIlavvPg~~gIav~SP~ 85 (101)
...-+=+|+|-+ .=.++..|. ..++||---
T Consensus 568 ~~~~~~~~~vAGKTGTa~~~~daWFvGytP~-~~~~VwvG~ 607 (720)
T 2jch_A 568 LNPTLANADWIGKTGTTNQDENMWLMLSTPR-LTLGGWIGH 607 (720)
T ss_dssp HCHHHHTSCCEEEEEECTTSCEEEEEEECSS-EEEEEEEEC
T ss_pred cccccCCCeEEEEcccCCCcCCEEEEEECCC-eEEEEEEec
Confidence 011233788864 346677784 578888643
No 19
>3fwm_A Penicillin-binding protein 1B; bacterial cell WALL synthesis, antibiotics design, transferase, hydrolase; HET: M0E; 2.16A {Escherichia coli} PDB: 3fwl_A* 3vma_A*
Probab=88.81 E-value=0.55 Score=40.87 Aligned_cols=81 Identities=16% Similarity=0.103 Sum_probs=53.5
Q ss_pred CcccHHHHHHHHHHHhCCCC--CC------------------CCCceeechhhHHHHHHHHHhhcccccccccee-ee-c
Q psy8041 1 METTCESFSVIAATLANGGI--CP------------------ITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAF-KV-G 58 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~--~p------------------~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~-~V-G 58 (101)
+++|.-|||.+.++|||+|+ .| ...+++++++++..+..+|... +-+..|..+. .+ |
T Consensus 561 ~~vTPlqmA~ayatiANgG~~~~P~~I~~I~d~~G~vi~~~~~~~~~vis~~tA~~~~~~L~~V-V~~GTg~~~~~~~~g 639 (751)
T 3fwm_A 561 LNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQV-VQRGTGRQLGAKYPN 639 (751)
T ss_dssp CEECHHHHHHHHHHHHTTSEECCCBSEEEEECTTSCEEEECCCCCEECSCHHHHHHHHHHHHHH-HHTSTTHHHHHHSGG
T ss_pred cccCHHHHHHHHHHHHcCCEEccCEEEEEEECCCCCEEeccCCCcccCCCHHHHHHHHHHHHHh-hcccchhhHHhcCCC
Confidence 46899999999999999995 12 1346889999999999988654 1233343321 11 3
Q ss_pred c--eeeccCCc-----eEEEEecCceEEEEEc
Q psy8041 59 L--PAKSGVSG-----SMLVVVPNTMGIALFF 83 (101)
Q Consensus 59 l--PaKSGVsG-----gIlavvPg~~gIav~S 83 (101)
. =+|+|-+= -.++..|. .-++||-
T Consensus 640 ~~vAGKTGTa~~~~daWFvGftp~-~v~~Vwv 670 (751)
T 3fwm_A 640 LHLAGKTGTTNNNVDTWFAGIDGS-TVTITWV 670 (751)
T ss_dssp GCCEEEEEECGGGSEEEEEEECSS-EEEEEEE
T ss_pred CeEEEEcccCCCCCCEEEEEECCC-eEEEEEE
Confidence 3 38888653 35666664 4666663
No 20
>1qme_A Penicillin-binding protein 2X; peptidoglycan synthesis, resistance, cell WALL, transmembrane; 2.4A {Streptococcus pneumoniae} SCOP: d.11.1.1 d.11.1.1 d.175.1.1 e.3.1.1 PDB: 1qmf_A* 1pyy_A* 1rp5_A 1pmd_A 1k25_A 2zc3_B* 2z2l_B* 2z2m_B* 2zc4_B* 2zc3_A* 2z2l_A* 2z2m_A* 2zc4_A* 2zc3_C* 2z2l_C* 2z2m_C* 2zc4_C*
Probab=88.56 E-value=0.47 Score=39.89 Aligned_cols=44 Identities=14% Similarity=0.104 Sum_probs=34.5
Q ss_pred CcccHHHHHHHHHHHhCCCC-----------CCCC----------CceeechhhHHHHHHHHHhh
Q psy8041 1 METTCESFSVIAATLANGGI-----------CPIT----------EEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~-----------~p~t----------ge~vl~~~~~r~v~alM~tc 44 (101)
+++|.-|||.+.++|||+|+ ++.. ..+++++++++.+..+|...
T Consensus 406 ~~vTplqma~ayaaiAN~G~~~~P~~v~~i~d~~g~~~~~~~~~~~~~~is~~~a~~v~~~m~~v 470 (702)
T 1qme_A 406 ISVTQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQTARKSQKEIVGNPVSKDAASLTRTNMVLV 470 (702)
T ss_dssp CBBCHHHHHHHHHHHHTTTCEECCBCEEEEEETTTTEEEECCCCEEECCSCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHhcCCEEeccEEEEEEecCCCceeeccCCcccCccCCHHHHHHHHHHHHHh
Confidence 36899999999999999995 2210 12468999999999999765
No 21
>3vsk_A Penicillin-binding protein 3; penicillin-binding domain, transpeptidase; 2.30A {Staphylococcus aureus} PDB: 3vsl_A*
Probab=88.52 E-value=1.2 Score=37.08 Aligned_cols=81 Identities=20% Similarity=0.279 Sum_probs=50.3
Q ss_pred cccHHHHHHHHHHHhCCCC--CCCC--------C-----------------ceeechhhHHHHHHHHHhhcc-ccccccc
Q psy8041 2 ETTCESFSVIAATLANGGI--CPIT--------E-----------------EKVLRSESVRDVLSLMHSCGM-YDYSGQF 53 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~--~p~t--------g-----------------e~vl~~~~~r~v~alM~tcGm-Yd~SG~f 53 (101)
.+|.-|||.+.++|||+|+ .|.- + +..+++++++.+...|...=- -+.+|..
T Consensus 482 ~vTPLQma~a~aaiAN~G~~~~P~lv~~i~~~~~~~~~~~~~~~~~~~v~~~~~~s~~~~~~v~~~m~~vv~~~~GTg~~ 561 (646)
T 3vsk_A 482 TYTPLQLSQYVSTIANDGYRIQPHIGLTIHESTNKDEVGPLKKKINGTVLNKVNNTEKEIKQIQEGFKMAFNDKDGTGYV 561 (646)
T ss_dssp CBCHHHHHHHHHHHHTTTEEECCBSEEEECCCCSSSSCCCCCEECCCCEEEECSCCHHHHHHHHHHHHTTTSSTTSTTHH
T ss_pred ccCcHHHHHHHHHHhcCCeEeeeEEEEEEecCCCceeccccccccCccccccccCCHHHHHHHHHHHHHhCcCCCceeeh
Confidence 4789999999999999995 3421 1 112577888989888875411 1234444
Q ss_pred eee-ecce--eeccCC-----c------eEEEEecC---ceEEEEE
Q psy8041 54 AFK-VGLP--AKSGVS-----G------SMLVVVPN---TMGIALF 82 (101)
Q Consensus 54 a~~-VGlP--aKSGVs-----G------gIlavvPg---~~gIav~ 82 (101)
+++ .|.| +|+|-+ | -.++..|- +..|+||
T Consensus 562 a~~~~~~~vaGKTGTAq~~~~~~~~~~awFvGfaP~d~P~~avaVv 607 (646)
T 3vsk_A 562 SFKDTVVPTAGKTGTAEVFQNGEPRVNSTYIGYAPIDDPKLAFSIV 607 (646)
T ss_dssp HHSSCSSCCEEEEEEEEEEC--CEEEEEEEEEEECSSSCCEEEEEE
T ss_pred hhcCCCCEEEEEcccceeccCCCCceeEEEEEEeEcCCCeEEEEEE
Confidence 433 3444 788873 2 35666663 3556665
No 22
>2wad_A Penicillin-binding protein 2B; peptidoglycan synthesis, transme antibiotic resistance, cell shape, peptidoglycan; 2.18A {Streptococcus pneumoniae} PDB: 2wae_A 2waf_A
Probab=88.16 E-value=2.4 Score=35.67 Aligned_cols=86 Identities=13% Similarity=0.091 Sum_probs=54.9
Q ss_pred cccHHHHHHHHHHHhCCCC-----------CCCC----C------------ceeechhhHHHHHHHHHhhccc-cccccc
Q psy8041 2 ETTCESFSVIAATLANGGI-----------CPIT----E------------EKVLRSESVRDVLSLMHSCGMY-DYSGQF 53 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~-----------~p~t----g------------e~vl~~~~~r~v~alM~tcGmY-d~SG~f 53 (101)
.+|.-|||.+.++|||+|+ ++.. | ++++++++++.+..+|...=-. +..|.-
T Consensus 522 ~vTPlqma~a~aaiANgG~~~~P~lv~~i~~~~~~~~~G~~v~~~~~~~~~~~~~s~~~a~~v~~~m~~vv~~~~GT~~~ 601 (680)
T 2wad_A 522 NYTPMQLAQYVATIANNGVRLAPHIVEGIYDNNDKGGLGELIQAIDTKEINKVNISESDMAILHQGFYQVSHGTSPLTTG 601 (680)
T ss_dssp BBCHHHHHHHHHHHHTTTEEECCBSEEEEEEECTTSSEEEEEEECCCCEEEECSSCHHHHHHHHHHHHHHHHCCSTTCCC
T ss_pred chhHHHHHHHHHHHHcCCEEeecEEEEEeecCCcccccCceeeccCCccccccCCCHHHHHHHHHHHHHHhcCCCCceEe
Confidence 4799999999999999985 2210 1 1248999999999999754111 122222
Q ss_pred e---eeec--ceeeccCC------------ceEEEEec---CceEEEEEcCCCC
Q psy8041 54 A---FKVG--LPAKSGVS------------GSMLVVVP---NTMGIALFFRTTQ 87 (101)
Q Consensus 54 a---~~VG--lPaKSGVs------------GgIlavvP---g~~gIav~SP~LD 87 (101)
+ ..-| +=+|+|-+ .-.++..| -+..++||-|--+
T Consensus 602 a~~~~~~g~~vaGKTGTaq~~~~~~~~~~~awFvG~aP~d~P~~avaV~v~~~~ 655 (680)
T 2wad_A 602 RAFSDGATVSISGKTGTGESYVAGGQEATNTNAVAYAPTENPQIAVAVVFPHNT 655 (680)
T ss_dssp GGGTTTCSSCCEEEECC------------CCCEEEEESTTSCCEEEEEECTTCC
T ss_pred eccccCCCceEEEEeecccccCCCCCCcceEEEEEEeeCCCCEEEEEEEEecCC
Confidence 1 1123 33787753 24677888 3678999987543
No 23
>1ghp_A Beta-lactamase, penicillinase; hydrolase, antibiotic resistance, beta-lactam hydrolysis, benzylpenicillin, cephaloridine; HET: PNM; 1.76A {Staphylococcus aureus} SCOP: e.3.1.1 PDB: 1ghi_A* 1ghm_A* 1kgf_A 1kge_A 1ome_A 1kgg_A 1dja_A 3blm_A 1blh_A* 1blc_A 1djc_A 1djb_A 1blp_A 1pio_A
Probab=82.93 E-value=1.2 Score=31.91 Aligned_cols=36 Identities=25% Similarity=0.274 Sum_probs=31.1
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhc
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCG 45 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcG 45 (101)
.+|..|+|++...|+++. +++++..+.+..+|....
T Consensus 148 ~~T~~d~a~~~~~l~~~~--------~ls~~~~~~l~~~m~~~~ 183 (258)
T 1ghp_A 148 TSTPAAFGKTLNKLIANG--------KLSKENKKFLLDLMLNNK 183 (258)
T ss_dssp EECHHHHHHHHHHHTTSS--------SSCHHHHHHHHHHHHHCG
T ss_pred ccCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHcCC
Confidence 368999999999999864 789999999999998754
No 24
>3lez_A Beta-lactamase; antibiotic resistance, halotolerant, DEEP- SEA bacterium, hydrolase; HET: EPE; 1.25A {Oceanobacillus iheyensis} SCOP: e.3.1.1
Probab=82.91 E-value=3.2 Score=30.63 Aligned_cols=69 Identities=16% Similarity=0.301 Sum_probs=47.6
Q ss_pred ccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeecce------eeccCC--ce--E--E
Q psy8041 3 TTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLP------AKSGVS--GS--M--L 70 (101)
Q Consensus 3 v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlP------aKSGVs--Gg--I--l 70 (101)
.|.+|+|++...|.++. +++++..+.++.+|..+-. |.-..+.|+| .|+|-+ |. - +
T Consensus 150 tTp~d~a~ll~~l~~g~--------~ls~~~~~~l~~~m~~~~~----~~~~l~a~lP~g~~Va~KTGt~~~g~~~d~gi 217 (260)
T 3lez_A 150 STAKAMATTLQQYVLED--------VLDADRREVLTNMLINNTT----GDALIRAGVPDGWTVGDKTGAGGYGTRNDIGI 217 (260)
T ss_dssp EEHHHHHHHHHHHHTSS--------SSCHHHHHHHHHHHHTCSS----CTTTGGGGSCTTCEEEEEEEEETTTEEEEEEE
T ss_pred cCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHhcCCC----CCccccccCCCCCEEEeecCCCCCCCcCceEE
Confidence 58899999999999865 6899999999999987732 2222345666 488863 32 1 2
Q ss_pred EEec---CceEEEEEc
Q psy8041 71 VVVP---NTMGIALFF 83 (101)
Q Consensus 71 avvP---g~~gIav~S 83 (101)
.-.| ...-|+||.
T Consensus 218 v~~p~~~~~~vvaV~~ 233 (260)
T 3lez_A 218 IWPEGDEEPIVIAIMS 233 (260)
T ss_dssp EECTTTCCCEEEEEEE
T ss_pred EecCCCCCcEEEEEEe
Confidence 2345 456677775
No 25
>2dcf_A 6-aminohexanoate-dimer hydrolase; HET: ACA MES; 1.40A {Flavobacterium SP} SCOP: e.3.1.1 PDB: 3a65_A* 1wyc_A 2zm7_A* 2e8i_A* 2zma_A* 3a66_A* 2zm0_A* 1wyb_A 2zm8_A* 2zly_A* 2zm9_A* 2zm2_A*
Probab=81.37 E-value=1.1 Score=35.12 Aligned_cols=85 Identities=21% Similarity=0.251 Sum_probs=53.3
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhcc-----------cccccccee---eecceeeccCCc
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGM-----------YDYSGQFAF---KVGLPAKSGVSG 67 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGm-----------Yd~SG~fa~---~VGlPaKSGVsG 67 (101)
-.|.+|||+++..|.|+|.- .|+++|+++.++...+--....+ +.+.-.|.. ..+.=..+|..|
T Consensus 270 ~sT~~Dlar~~~~ll~~G~~--~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~gw~~~~~~~~~~~h~G~~G 347 (392)
T 2dcf_A 270 SCTARDLARVGRMMLDGGVA--PGGRVVSEDWVRRVLAGGSHEAMTDKGFTNTFPDGSYTRQWWCTGNERGNVSGIGIHG 347 (392)
T ss_dssp EECHHHHHHHHHHHHTTTEE--TTEECSCHHHHHHHHHCCCTTTCCCHHHHHHCTTCEEETTEEECCCTTCCEEEEETTT
T ss_pred ecCHHHHHHHHHHHHcCCcc--CCEEeCCHHHHHHHhccCCchhcccccccCCCCCCCcCcceEecCCCCCeEEEEccCC
Confidence 36899999999999999963 78999999988865542100000 011111211 112224578888
Q ss_pred eEEEEecCc-eEEEEEcCCCCc
Q psy8041 68 SMLVVVPNT-MGIALFFRTTQN 88 (101)
Q Consensus 68 gIlavvPg~-~gIav~SP~LD~ 88 (101)
-.+.+.|.. .+|.+.+=.-+.
T Consensus 348 ~~~~i~P~~~~~iv~lsn~~~~ 369 (392)
T 2dcf_A 348 QNLWLDPLTDSVIVKLSSWPDP 369 (392)
T ss_dssp EEEEEEGGGTEEEEEEECCSSS
T ss_pred eEEEEECCCCEEEEEeCCCCCC
Confidence 888888874 477777754433
No 26
>1alq_A CP254 beta-lactamase; hydrolase, circular permuted, antibiotic resistance; 1.80A {Staphylococcus aureus} SCOP: e.3.1.1
Probab=80.69 E-value=1.4 Score=32.71 Aligned_cols=34 Identities=26% Similarity=0.301 Sum_probs=30.5
Q ss_pred ccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh
Q psy8041 3 TTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 3 v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc 44 (101)
.|..|+|++...|+++. +++++..+.++.+|..+
T Consensus 194 tTa~d~a~l~~~l~~g~--------~ls~~~~~~l~~~m~~~ 227 (266)
T 1alq_A 194 STPAAFGKTLNKLIANG--------KLSKENKKFLLDLMLNN 227 (266)
T ss_dssp ECHHHHHHHHHHHTTSS--------SCCHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHcC
Confidence 68999999999999875 79999999999999765
No 27
>1nrf_A Regulatory protein BLAR1; penicillin-receptor, beta-lactamase induction, penicillin-binding protein, membrane protein; 2.50A {Bacillus licheniformis} SCOP: e.3.1.1
Probab=80.58 E-value=1.5 Score=32.52 Aligned_cols=37 Identities=8% Similarity=0.033 Sum_probs=32.6
Q ss_pred CcccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh
Q psy8041 1 METTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc 44 (101)
+++|..|+|.+-+.|||+ ++++++++.+.++.+|...
T Consensus 154 ~~~tpl~~a~~~~~i~n~-------~~~~s~~~~~~v~~~m~~v 190 (262)
T 1nrf_A 154 LQISPLEQVNILKKFYDN-------EFDFKQSNIETVKDSIRLE 190 (262)
T ss_dssp SCBCHHHHHHHHHHHHHT-------TTCCCHHHHHHHHHHHEEE
T ss_pred hhhCHHHHHHHHHHHhcC-------CCCCCHHHHHHHHHHHHHh
Confidence 368999999999999996 5689999999999999865
No 28
>1m40_A TEM-1, beta-lactamase TEM; acylation mechanism, ultra- high resolution, hydrolase; HET: CB4; 0.85A {Escherichia coli} SCOP: e.3.1.1 PDB: 1jwp_A* 1nxy_A* 1ny0_A* 1nym_A* 1nyy_A* 1pzo_A* 1erm_A* 1ero_A* 1erq_A* 1s0w_A 1xpb_A 1li0_A 1htz_A 1jtd_A 1esu_A 1jwz_A* 1li9_A 1jwv_A* 1jtg_A 1axb_A* ...
Probab=80.28 E-value=1.7 Score=30.89 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=30.3
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc 44 (101)
.+|..|+|++...|+|+. +++++..+.++.+|...
T Consensus 155 ~~T~~d~a~~~~~l~~~~--------~l~~~~~~~~~~~~~~~ 189 (263)
T 1m40_A 155 TTTPAAMATTLRKLLTGE--------LLTLASRQQLIDWMEAD 189 (263)
T ss_dssp EECHHHHHHHHHHHHHST--------TSCHHHHHHHHHHHHCC
T ss_pred ccCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHhC
Confidence 468999999999999975 58889999999999754
No 29
>3udf_A Penicillin-binding protein 1A; transglycosylase, transpeptidase; HET: MES; 1.70A {Acinetobacter baumannii} PDB: 3udi_A* 3udx_A* 3ue0_A* 3ue1_A*
Probab=80.05 E-value=2.1 Score=37.00 Aligned_cols=56 Identities=20% Similarity=0.307 Sum_probs=34.4
Q ss_pred ceeechhhHHHHHHHHHhhccccccccceeeec---ceeeccCCc-----eEEEEecCceEEEEEc
Q psy8041 26 EKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVG---LPAKSGVSG-----SMLVVVPNTMGIALFF 83 (101)
Q Consensus 26 e~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VG---lPaKSGVsG-----gIlavvPg~~gIav~S 83 (101)
+++++++++..+..+|...= -+..|.-+...| +=+|+|-+- =.++..| ..-++||-
T Consensus 623 ~~vis~~tA~~~~~mL~~VV-~~GTg~~a~~~~~~~vAGKTGTt~~~~daWFvGytP-~~~~~Vwv 686 (731)
T 3udf_A 623 QRILKSSSAYDMANILRDVI-EHGTGRAALKIGRSDLGGKTGTTNDAKDAWFAGFNG-KLVTVTWV 686 (731)
T ss_dssp CBCSCHHHHHHHHHHHHHHH-HHCC------CCCSSCEEEEEECGGGCCEEEEEEET-TEEEEEEE
T ss_pred CcCCCHHHHHHHHHHHHhhc-cCCchhhcccCCCCeEEEEecCCCCCCCEEEEEECC-CeEEEEEE
Confidence 58999999999999997541 123333333222 348888753 3677778 45788884
No 30
>2p74_A Beta-lactamase CTX-M-9A; ultra-high resolution, acylation, ESBL, hydrolase; HET: PO4; 0.88A {Escherichia coli} PDB: 3g2y_A* 4dds_A* 4ddy_A* 4de0_A* 4de1_A* 4de2_A* 4de3_A* 1ylj_A* 1yly_A* 1ym1_A* 1yms_A* 1ymx_A* 3g2z_A* 3g30_A* 3g31_A* 3g32_A* 3g34_A* 3g35_A* 1ylt_A* 1ylz_A* ...
Probab=75.45 E-value=3.8 Score=28.92 Aligned_cols=35 Identities=14% Similarity=0.164 Sum_probs=30.2
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc 44 (101)
.+|..|++++...|+++. +++++..+.+..+|...
T Consensus 155 ~~T~~dla~~~~~l~~~~--------~l~~~~~~~~~~~~~~~ 189 (263)
T 2p74_A 155 TTTPRAMAQTLRQLTLGH--------ALGETQRAQLVTWLKGN 189 (263)
T ss_dssp EECHHHHHHHHHHHHTSS--------SSCHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHhcC
Confidence 468999999999999863 68999999999999764
No 31
>1k38_A Penicillinase, beta-lactamase OXA-2; serine beta-lactamase, hydrolase, antibiotic resistance, carbamylated lysine; HET: KCX; 1.50A {Salmonella typhimurium} SCOP: e.3.1.1 PDB: 3if6_A*
Probab=72.88 E-value=3.1 Score=30.96 Aligned_cols=36 Identities=19% Similarity=0.133 Sum_probs=31.1
Q ss_pred CcccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHh
Q psy8041 1 METTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHS 43 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~t 43 (101)
+.+|.-|+|.+.+.++|++ +.+++++.+.+...|..
T Consensus 143 ~~vTplq~a~~~~~i~n~~-------~~~s~~~~~~v~~~M~~ 178 (254)
T 1k38_A 143 LAISAQEQIAFLRKLYRNE-------LPFRVEHQRLVKDLMIV 178 (254)
T ss_dssp CCBCHHHHHHHHHHHHTTC-------SSSCHHHHHHHHHHTEE
T ss_pred cccCHHHHHHHHHHHhcCC-------CCCCHHHHHHHHHHHhh
Confidence 4689999999999999974 46899999999999863
No 32
>4euz_A Carbapenem-hydrolizing beta-lactamase SFC-1; carbapenemase, hydrolase, antibiotic resistance, beta-lactam complex; HET: HAR MEM; 1.08A {Serratia fonticola} PDB: 4eqi_A 4ev4_A*
Probab=70.67 E-value=3.9 Score=30.72 Aligned_cols=51 Identities=20% Similarity=0.295 Sum_probs=38.9
Q ss_pred ccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeecce------eeccC
Q psy8041 3 TTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLP------AKSGV 65 (101)
Q Consensus 3 v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlP------aKSGV 65 (101)
.|.+|+|++...|.++. .++++..+.++.+|..+-. |.-..+.|+| .|+|-
T Consensus 160 tTp~d~a~ll~~l~~g~--------~ls~~~~~~l~~~m~~~~~----~~~~l~a~lP~g~~Va~KTGt 216 (283)
T 4euz_A 160 STPKAVAESMQKLAFGN--------VLGLTERHQLMDWFKGNTT----GGARIRASVPANWVVGDKTGT 216 (283)
T ss_dssp ECHHHHHHHHHHHHHSS--------SSCHHHHHHHHHHHHTCSS----CTTTGGGGSCTTSEEEEEEEE
T ss_pred cCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHhcCCC----CcccccccCCCCCEEEeeecC
Confidence 58899999999999875 6899999999999987632 2223455666 37776
No 33
>3qhy_A Beta-lactamase; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Bacillus anthracis}
Probab=70.18 E-value=2.7 Score=31.37 Aligned_cols=69 Identities=23% Similarity=0.384 Sum_probs=46.6
Q ss_pred ccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeecce------eeccCC--ce--EEE-
Q psy8041 3 TTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLP------AKSGVS--GS--MLV- 71 (101)
Q Consensus 3 v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlP------aKSGVs--Gg--Ila- 71 (101)
.|.+|+|++...|.++. .++++..+.++.+|..+-. |.-..+.|+| .|+|-. |. -.+
T Consensus 163 tTp~d~a~ll~~l~~g~--------~ls~~~~~~l~~~m~~~~~----~~~~l~a~lP~g~~Va~KTGt~~~g~~~d~gi 230 (271)
T 3qhy_A 163 STAKAIATNLKAFTAGN--------ALPNHKRNILTKWMKGNAT----GDKLIRAGVPTNWVVADKSGAGSYGTRNDIAI 230 (271)
T ss_dssp ECHHHHHHHHHHHHHSS--------SSCHHHHHHHHHHHBSCGG----GTTTHHHHSCTTSEEEEEEEEETTTEEEEEEE
T ss_pred cCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHhcCCc----CccchhccCCCCCEEEeeeccCCCCCcccEEE
Confidence 58999999999999876 5899999999999987632 2223345666 588863 31 122
Q ss_pred E-ecC--ceEEEEEc
Q psy8041 72 V-VPN--TMGIALFF 83 (101)
Q Consensus 72 v-vPg--~~gIav~S 83 (101)
| .|+ ..-|+||.
T Consensus 231 v~~p~~~~~vvaV~~ 245 (271)
T 3qhy_A 231 VWPPNRAPIIIAILS 245 (271)
T ss_dssp EECTTSCCEEEEEEE
T ss_pred EECCCCCcEEEEEEE
Confidence 2 243 45677764
No 34
>3zyt_A Esterase A, ESTA; hydrolase, enzymatic promiscuity, beta-lactamase; 2.45A {Arthrobacter nitroguajacolicus}
Probab=67.28 E-value=3.6 Score=31.43 Aligned_cols=84 Identities=21% Similarity=0.256 Sum_probs=49.7
Q ss_pred ccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhcc---cccccccee-----e----ecce---eeccCCc
Q psy8041 3 TTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGM---YDYSGQFAF-----K----VGLP---AKSGVSG 67 (101)
Q Consensus 3 v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGm---Yd~SG~fa~-----~----VGlP---aKSGVsG 67 (101)
.|++|||++...|.|++.-...++++++++.++...+-. +.+. +.....|.+ . .+-+ .-+|.+|
T Consensus 249 sTa~Dlar~~~~ll~g~~G~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~~~~~~GlG~~~~~~~~~~~~~~~~GH~G~~G 327 (372)
T 3zyt_A 249 ASAEGMARIYAAALTGLEGKSAMPPLLTEETIRTVSAEQ-VFGIDRVFGETGCFGTVFMKSHTRMPFGSYRAFGHDGASA 327 (372)
T ss_dssp ECHHHHHHHHHHHHTCBCGGGCBCCSSCHHHHHHHHSCC-EEEEBTTTSSEEEESSSSEECBTTBCSSCTTCEEEECTTS
T ss_pred cCHHHHHHHHHHHHhCCCCCcCCcccCcHHHHHHHhccC-CCCCCcccCCCCceeeeeccCCCCCCCCCCCeEEECChhh
Confidence 589999999999999765566788999999887543211 1110 011111111 0 1111 2467778
Q ss_pred eEEEEecCce-EEEEEcCCCC
Q psy8041 68 SMLVVVPNTM-GIALFFRTTQ 87 (101)
Q Consensus 68 gIlavvPg~~-gIav~SP~LD 87 (101)
..+-+.|.+. +|++.+=..+
T Consensus 328 t~~~idP~~~l~v~~ltN~~~ 348 (372)
T 3zyt_A 328 SLGFADPVYELGFGYVPQTAE 348 (372)
T ss_dssp CEEEEEGGGTEEEEEEESBCC
T ss_pred EEEEEEeCCCEEEEEEeCCCC
Confidence 7887878764 6666654333
No 35
>3ny4_A Beta-lactamase, penicillinase; penicillin binding protein, beta-lactam complex, hydrolase-A complex; HET: SMX; 1.22A {Mycobacterium tuberculosis} PDB: 3m6b_A* 3dwz_A* 3iqa_A* 3cg5_A* 3m6h_A* 4df6_A* 2gdn_A 3vfh_A* 3vff_A* 3n8l_A* 3n6i_A* 3n7w_A* 3n8r_A* 3n8s_A* 3nbl_A* 3nc8_A* 3nck_A* 3nde_A* 3ndg_A*
Probab=66.77 E-value=5.2 Score=29.54 Aligned_cols=51 Identities=22% Similarity=0.345 Sum_probs=38.5
Q ss_pred ccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeecce------eeccC
Q psy8041 3 TTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLP------AKSGV 65 (101)
Q Consensus 3 v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlP------aKSGV 65 (101)
.|.+|++++...|.++- +++++..+.++.+|..+- .+.-..+.|+| .|+|-
T Consensus 155 tT~~d~a~ll~~l~~g~--------~ls~~~~~~l~~~m~~~~----~~~~~l~~~lp~g~~va~KTG~ 211 (265)
T 3ny4_A 155 TTPHAIALVLQQLVLGN--------ALPPDKRALLTDWMARNT----TGAKRIRAGFPADWKVIDKTGT 211 (265)
T ss_dssp ECHHHHHHHHHHHHTSS--------SSCHHHHHHHHHHHHTCS----SCTTTHHHHSCTTSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHcCC----cCcccccccCCCCCEEEecccC
Confidence 58999999999999753 689999999999998753 22333455666 47775
No 36
>3p09_A Beta-lactamase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich, cytosol; HET: MSE; 1.90A {Francisella tularensis subsp}
Probab=65.45 E-value=6.9 Score=29.45 Aligned_cols=52 Identities=17% Similarity=0.200 Sum_probs=38.8
Q ss_pred ccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeecce------eeccCC
Q psy8041 3 TTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLP------AKSGVS 66 (101)
Q Consensus 3 v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlP------aKSGVs 66 (101)
.|.+|+|++...|.++. .++++..+.++.+|..+-.. .-..+.|+| .|+|-.
T Consensus 176 tT~~d~a~ll~~l~~g~--------~ls~~~~~~l~~~m~~~~~~----~~~l~a~lP~g~~Va~KTGt~ 233 (290)
T 3p09_A 176 TTPKAITKDIYKLAFGN--------ILDKKHKDIFIKYLQDNNTG----ANRIAFSMPKDWIIGDKTGTC 233 (290)
T ss_dssp ECHHHHHHHHHHHHHSS--------SSCHHHHHHHHHHHHHCCTT----TTTGGGGSCTTSEEEEEEEEC
T ss_pred cCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHcCCcC----cccccccCCCCCEEEeeccCC
Confidence 58999999999999865 68999999999999765322 222455666 477754
No 37
>1n9b_A Penicillinase, beta-lactamase SHV-2; beta-lactam hydrolase, detergent binding, drug design, radiation damage; HET: MA4 EPE; 0.90A {Klebsiella pneumoniae} SCOP: e.3.1.1 PDB: 3d4f_A* 2zd8_A* 1q2p_A* 1shv_A* 1vm1_A* 2g2u_A 2h5s_A* 1ong_A* 3c4o_A 3c4p_A 3mke_A* 3mkf_A* 3mxr_A* 3mxs_A* 3n4i_A 2a3u_A* 3opr_A* 3opl_A* 3oph_A* 3opp_A* ...
Probab=65.35 E-value=5.4 Score=28.35 Aligned_cols=36 Identities=25% Similarity=0.194 Sum_probs=31.0
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhc
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCG 45 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcG 45 (101)
.+|..|+|++...|+|+- +++++..+.+..+|....
T Consensus 155 ~~T~~d~a~~~~~l~~~~--------~l~~~~~~~~~~~m~~~~ 190 (265)
T 1n9b_A 155 TTTPASMAATLRKLLTSQ--------RLSARSQRQLLQWMVDDR 190 (265)
T ss_dssp EECHHHHHHHHHHHHHSS--------SSCHHHHHHHHHHHHTCS
T ss_pred cCCHHHHHHHHHHHhcCC--------CCCHHHHHHHHHHHHcCC
Confidence 468999999999999963 689999999999998653
No 38
>3dw0_A Class A carbapenemase KPC-2; beta-lactamase, antibiotic resistance, hydrolase; 1.60A {Escherichia coli}
Probab=65.07 E-value=8 Score=29.14 Aligned_cols=69 Identities=14% Similarity=0.299 Sum_probs=46.0
Q ss_pred ccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeecce------eeccC-C--ce--EEE
Q psy8041 3 TTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLP------AKSGV-S--GS--MLV 71 (101)
Q Consensus 3 v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlP------aKSGV-s--Gg--Ila 71 (101)
.|.+|+|++...|.++- +++++..+.++.+|..+-. +.-..+.|+| .|+|- + |. -.+
T Consensus 180 tTp~d~a~ll~~l~~g~--------~ls~~~~~~l~~~m~~~~~----~~~~l~a~lP~g~~Va~KTGt~g~~g~~~d~g 247 (294)
T 3dw0_A 180 SSPRAVTESLQKLTLGS--------ALAAPQRQQFVDWLKGNTT----GNHRIRAAVPADWAVGDKTGTCGVYGTANDYA 247 (294)
T ss_dssp ECHHHHHHHHHHHHTSS--------SSCHHHHHHHHHHHHTCSS----CTTTGGGGSCTTSEEEEEEEECSSTTCEEEEE
T ss_pred cCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHhCCc----CcccccccCCCCCEEEeccCCCCCCCceeeEE
Confidence 58999999999999863 6899999999999986532 2223455666 47775 2 21 122
Q ss_pred -E-ecC--ceEEEEEc
Q psy8041 72 -V-VPN--TMGIALFF 83 (101)
Q Consensus 72 -v-vPg--~~gIav~S 83 (101)
| .|+ ..-|+||.
T Consensus 248 iv~~p~~~~~viaV~~ 263 (294)
T 3dw0_A 248 VVWPTGRAPIVLAVYT 263 (294)
T ss_dssp EEECTTSCCEEEEEEE
T ss_pred EEECCCCCeEEEEEEE
Confidence 2 343 36777774
No 39
>3hlc_A Transesterase, LOVD; alpha/beta hydrolase fold, transferase; HET: PG4; 2.00A {Aspergillus terreus} PDB: 3hld_A* 3hlf_A* 3hle_A* 3hlg_A* 3hlb_A 3hl9_A
Probab=63.52 E-value=4.7 Score=31.64 Aligned_cols=30 Identities=13% Similarity=0.151 Sum_probs=25.4
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHH
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDV 37 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v 37 (101)
-.|++|+|+++..|.|+| +++|+++.++..
T Consensus 292 ~sTa~Dlarf~~~ll~~g------~~lLs~~~v~~m 321 (432)
T 3hlc_A 292 FSSPGSYMKVLHSLLKRD------GLLLQPQTVDLM 321 (432)
T ss_dssp EECHHHHHHHHHHHHHTC------SSSSCHHHHHHH
T ss_pred eECHHHHHHHHHHHHhCC------CccCCHHHHHHH
Confidence 468999999999999976 689999887754
No 40
>1e25_A Extended-spectrum beta-lactamase PER-1; hydrolase, antibiotic resistance, class A cephalosporinase; 1.9A {Pseudomonas aeruginosa} SCOP: e.3.1.1
Probab=63.15 E-value=8.5 Score=27.51 Aligned_cols=35 Identities=14% Similarity=0.015 Sum_probs=30.4
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc 44 (101)
.+|..||+++...|+|+. +++++..+.+..+|...
T Consensus 159 ~~T~~dla~~~~~l~~~~--------~ls~~~~~~l~~~m~~~ 193 (282)
T 1e25_A 159 WTSMKGAAEILKKFEQKT--------QLSETSQALLWKWMVET 193 (282)
T ss_dssp EECHHHHHHHHHHHHTTC--------SSCHHHHHHHHHHHHSC
T ss_pred CcCHHHHHHHHHHHHhCC--------CCCHHHHHHHHHHHHcC
Confidence 468999999999999974 78999999999999764
No 41
>3g4p_A Beta-lactamase OXA-24; B-lactamases, enzyme mechanism, carbapenem, resistance, HYDR; HET: KCX; 1.97A {Acinetobacter baumannii} PDB: 2jc7_A* 3fyz_A* 3fzc_A* 3fv7_A* 3mbz_A* 3pae_A* 3pag_A*
Probab=61.69 E-value=5.8 Score=29.54 Aligned_cols=51 Identities=20% Similarity=0.118 Sum_probs=38.4
Q ss_pred CcccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeecceeeccCC
Q psy8041 1 METTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLPAKSGVS 66 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlPaKSGVs 66 (101)
+++|..|++.+-+.|||+. ..+++++.+.+..+|.. +....|. +=+|.|-+
T Consensus 141 l~isP~e~~~~~~~l~~~~-------l~~s~~~~~~v~~~m~~----~~~~g~~----~~GKTGta 191 (244)
T 3g4p_A 141 LKITPVQEVNFADDLAHNR-------LPFKLETQEEVKKMLLI----KEVNGSK----IYAKSGWG 191 (244)
T ss_dssp CCBCHHHHHHHHHHHHTTC-------SSSCHHHHHHHHHTTEE----EEETTEE----EEEEEEEE
T ss_pred cCcCHHHHHHHHHHHHhCC-------CCCCHHHHHHHHHHHhh----hccCCee----EEeEEecc
Confidence 4789999999999999964 35899999999999985 3333332 22677664
No 42
>3hbr_A OXA-48; class D beta-lactamase, antibiotic, dimer, hydrolase; HET: KCX; 1.90A {Klebsiella pneumoniae}
Probab=61.45 E-value=7.7 Score=29.29 Aligned_cols=36 Identities=14% Similarity=0.089 Sum_probs=31.6
Q ss_pred CcccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHh
Q psy8041 1 METTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHS 43 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~t 43 (101)
+.+|..|+|.+-..|+|++. .+++++.+.+..+|..
T Consensus 162 l~iTPlq~a~~~~~i~~~~~-------~~s~~~~~~v~~~m~~ 197 (265)
T 3hbr_A 162 IRISATEQISFLRKLYHNKL-------HVSERSQRIVKQAMLT 197 (265)
T ss_dssp CCEEHHHHHHHHHHHHTTCS-------SSCHHHHHHHHHHTEE
T ss_pred cccCHHHHHHHHHHHHcCCC-------CCCHHHHHHHHHHHhh
Confidence 46899999999999999753 5899999999999976
No 43
>2qpn_A Beta-lactamase GES-1; APO-enzyme, plasmid, hydrolase; 1.10A {Klebsiella pneumoniae} PDB: 3nia_A* 3ni9_A*
Probab=60.79 E-value=9.4 Score=27.56 Aligned_cols=35 Identities=23% Similarity=0.218 Sum_probs=30.5
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc 44 (101)
.+|..|+|++...|+++. +++++..+.+..+|...
T Consensus 175 ~~T~~dla~~~~~l~~~~--------~ls~~~~~~~~~~m~~~ 209 (287)
T 2qpn_A 175 TTTPIAMARTVAKVLYGG--------ALTSTSTHTIERWLIGN 209 (287)
T ss_dssp EECHHHHHHHHHHHHTSS--------SSCHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHcC
Confidence 468999999999999974 78999999999999765
No 44
>3c5a_A Class A carbapenemase KPC-2; beta-lactamase, C-terminal deleted mutant, plasmid, hydrolase; HET: CIT; 1.23A {Escherichia coli} PDB: 3rxw_A* 3rxx_A* 2ods_A 2ov5_A* 3e2k_A 3e2l_A*
Probab=60.03 E-value=9 Score=26.92 Aligned_cols=35 Identities=9% Similarity=0.144 Sum_probs=30.1
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc 44 (101)
.+|..|++++...|+++. +++++..+.+..+|...
T Consensus 154 ~~T~~dla~~~~~l~~~~--------~l~~~~~~~~~~~~~~~ 188 (264)
T 3c5a_A 154 TSSPRAVTESLQKLTLGS--------ALAAPQRQQFVDWLKGN 188 (264)
T ss_dssp EECHHHHHHHHHHHHTSS--------SSCHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHhC
Confidence 368999999999999863 78999999999999764
No 45
>2j9o_A TLL2115 protein; penicillin-binding protein, hydrolase, lactamase, thioestera DD-peptidase; 1.50A {Synechococcus elongatus} PDB: 2jbf_A* 2j7v_A 2j8y_A*
Probab=59.98 E-value=9.5 Score=27.99 Aligned_cols=34 Identities=18% Similarity=0.361 Sum_probs=28.7
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHh
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHS 43 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~t 43 (101)
.+|..|||++...|+|+. +++++..+.+...|..
T Consensus 166 ~~T~~dla~~~~~l~~~~--------~l~~~~~~~~~~~m~~ 199 (298)
T 2j9o_A 166 TTSPRDLATLMLKIGQGE--------ILSPRSRDRLLDIMRR 199 (298)
T ss_dssp EECHHHHHHHHHHHHTTC--------SSCHHHHHHHHHHHTS
T ss_pred ccCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHh
Confidence 478999999999999973 6888888888888754
No 46
>2cc1_A Beta-lactamase, penicillinase; hydrolase, antibiotic resistance, broad-spectrum; 2.13A {Mycobacterium fortuitum} SCOP: e.3.1.1
Probab=59.17 E-value=9 Score=26.83 Aligned_cols=35 Identities=14% Similarity=0.095 Sum_probs=30.5
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc 44 (101)
..|..|+|++...|+++. +++++..+.+..+|...
T Consensus 153 ~~T~~dla~~~~~l~~~~--------~ls~~~~~~~~~~~~~~ 187 (262)
T 2cc1_A 153 TSTPAALAVGYRAILAGD--------ALSPPQRGLLEDWMRAN 187 (262)
T ss_dssp EECHHHHHHHHHHHHHSS--------SSCHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHhC
Confidence 368999999999999863 78999999999999765
No 47
>1o7e_A L2 beta lactamase; hydrolase, class A; 1.51A {Stenotrophomonas maltophilia} SCOP: e.3.1.1 PDB: 1n4o_A
Probab=58.04 E-value=11 Score=26.88 Aligned_cols=35 Identities=17% Similarity=0.191 Sum_probs=30.4
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc 44 (101)
.+|..|++++...|+++. +++++..+.+..+|...
T Consensus 166 ~~T~~d~a~~~~~l~~~~--------~l~~~~~~~l~~~m~~~ 200 (276)
T 1o7e_A 166 TTTPAAMAATLQRVVLGE--------VLQPASRQQLADWLIDN 200 (276)
T ss_dssp EECHHHHHHHHHHHHTSS--------SSCHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHhCC--------CCCHHHHHHHHHHHhcC
Confidence 468999999999999864 68999999999999765
No 48
>1xkz_A Regulatory protein BLAR1; beta-lactam receptor, signal transduction, signaling protein; HET: CAZ EPE; 1.75A {Staphylococcus aureus} SCOP: e.3.1.1 PDB: 1xa1_A* 1xa7_A* 3q7z_A* 3q7v_A* 3q81_A* 3q82_A* 3uy6_A
Probab=57.08 E-value=11 Score=27.52 Aligned_cols=67 Identities=9% Similarity=0.054 Sum_probs=44.9
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeecceeeccCCc--------eEEEEe
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLPAKSGVSG--------SMLVVV 73 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlPaKSGVsG--------gIlavv 73 (101)
++|..|+|.+-..++++ ++++++++.+.+..+|... +.. -++ +-+|+|-+- -.++..
T Consensus 151 ~~TPlqma~~~~~i~~~-------~~~~s~~~~~~v~~~m~~v---~~~---~~~--vaGKTGTa~~~~~~~~awfvG~~ 215 (255)
T 1xkz_A 151 KISNLEQVIVFKNMMEQ-------NNHFSKKAKNQLSSSLLIK---KNE---KYE--LYGKTGTGIVNGKYNNGWFVGYV 215 (255)
T ss_dssp CEEHHHHHHHHHHHHHC-------C-CSCHHHHHHHHHHHEEE---ECS---SEE--EEEEEEEEEETTEEEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHhcC-------CCCCCHHHHHHHHHHHHhe---ecC---CeE--EEEEeecCcCCCCCCEEEEEEEE
Confidence 57899999999999885 4579999999999999854 111 112 236777542 234566
Q ss_pred cC---ceEEEEEc
Q psy8041 74 PN---TMGIALFF 83 (101)
Q Consensus 74 Pg---~~gIav~S 83 (101)
|- +..++||-
T Consensus 216 p~~~p~~~vaV~v 228 (255)
T 1xkz_A 216 ITNHDKYYFATHL 228 (255)
T ss_dssp EESSCEEEEEEEE
T ss_pred ECCCCeEEEEEEE
Confidence 62 55666664
No 49
>1bue_A Protein (imipenem-hydrolysing beta-lactamase); hydrolase, antibiotic resistance, class A carbapenemase; 1.64A {Enterobacter cloacae} SCOP: e.3.1.1 PDB: 1bul_A* 1dy6_A
Probab=57.05 E-value=10 Score=26.92 Aligned_cols=35 Identities=17% Similarity=0.168 Sum_probs=30.3
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc 44 (101)
.+|..|++++...|+++. +++++..+.+..+|...
T Consensus 155 ~~T~~d~a~~~~~l~~~~--------~ls~~~~~~~~~~~~~~ 189 (265)
T 1bue_A 155 TSTPAAVAKSLKTLALGN--------ILSEHEKETYQTWLKGN 189 (265)
T ss_dssp EECHHHHHHHHHHHHHSS--------SSCHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHcC
Confidence 368999999999999874 78999999999999764
No 50
>2iwb_A Methicillin resistance MECR1 protein; antibiotic resistance, bacterial antibiotic resistance, methicillin resistance, beta-lactamic antibiotics, MRSA; 1.8A {Staphylococcus aureus} PDB: 2iwc_A* 2iwd_A*
Probab=54.66 E-value=12 Score=27.15 Aligned_cols=37 Identities=5% Similarity=0.051 Sum_probs=30.9
Q ss_pred CcccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh
Q psy8041 1 METTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc 44 (101)
+.+|..|+|.+...++|+ ++.+++++.+.+..+|..+
T Consensus 143 ~~~Tplqma~~~~~i~~~-------~~~~s~~~~~~~~~~m~~v 179 (246)
T 2iwb_A 143 LKISAIEQVNLLKNMKQH-------NMHFDNKAIEKVENSMTLK 179 (246)
T ss_dssp CCBCHHHHHHHHHHHHTT-------CSSSCHHHHHHHHHHTEEE
T ss_pred cccCHHHHHHHHHHHhcC-------CCCCCHHHHHHHHHHHHHh
Confidence 368999999999999984 3469999999999988765
No 51
>2qmi_A PBP related beta-lactamase; PAB87, octamer, LU-HPDO3A, archaea, hydrolase; HET: DO3; 2.20A {Pyrococcus abyssi}
Probab=53.83 E-value=11 Score=29.55 Aligned_cols=30 Identities=3% Similarity=0.059 Sum_probs=24.9
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHH
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDV 37 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v 37 (101)
-.|++|||+.+..|.|+|. ++|+++.++..
T Consensus 238 ~sT~~Dla~~~~~ll~~g~------~lls~~~~~~m 267 (447)
T 2qmi_A 238 LSSVLDLAKYLKMYIERDE------SIVSKEYIEKM 267 (447)
T ss_dssp EECHHHHHHHHHHHHTTCC------SSSCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhCCC------ccCCHHHHHHH
Confidence 4689999999999999874 78998877654
No 52
>1g6a_A Beta-lactamase PSE-4; class A beta-lactamase, carbenicillinase, R234K mutant, hydrolase; 1.75A {Pseudomonas aeruginosa} SCOP: e.3.1.1 PDB: 1g68_A
Probab=51.58 E-value=14 Score=26.10 Aligned_cols=35 Identities=17% Similarity=0.140 Sum_probs=30.3
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc 44 (101)
.+|..|++++...|+++. +++++..+.+..+|...
T Consensus 158 ~~T~~d~a~~~~~l~~~~--------~ls~~~~~~~~~~~~~~ 192 (271)
T 1g6a_A 158 TTTPKAIASTLNKFLFGS--------ALSEMNQKKLESWMVNN 192 (271)
T ss_dssp EECHHHHHHHHHHHHHSS--------SSCHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHhC
Confidence 368999999999999874 68899999999999765
No 53
>1hzo_A Beta-lactamase; mixed alpha/beta, cephalosporinase, hydrolase; HET: MES; 1.75A {Proteus vulgaris} SCOP: e.3.1.1
Probab=51.34 E-value=17 Score=25.86 Aligned_cols=34 Identities=12% Similarity=0.164 Sum_probs=29.6
Q ss_pred ccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh
Q psy8041 3 TTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 3 v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc 44 (101)
.|..|+|++...|+++. +++++..+.+..+|...
T Consensus 157 ~T~~dla~~~~~l~~~~--------~l~~~~~~~~~~~~~~~ 190 (271)
T 1hzo_A 157 TSPIAMAKSLQALTLGD--------ALGQSQRQQLVTWLKGN 190 (271)
T ss_dssp ECHHHHHHHHHHHHTSS--------SSCHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHcC
Confidence 68999999999999875 68899999999998764
No 54
>2wk0_A Beta-lactamase; hydrolase, iodopenicillanate, antibiotic resistance; HET: BIY CIT; 1.65A {Bacillus licheniformis} PDB: 2x71_A* 3b3x_A* 1i2s_A* 1i2w_A* 2y91_A* 2blm_A 4blm_A 3sh9_A* 3sh7_A* 3sh8_A* 3ly3_A 3kgo_A* 3ly4_A* 3kgm_A* 3kgn_A* 3m2j_A* 3m2k_A* 3soi_A* 1mbl_A
Probab=51.02 E-value=22 Score=25.12 Aligned_cols=36 Identities=17% Similarity=0.141 Sum_probs=30.6
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhc
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCG 45 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcG 45 (101)
.+|..|++++...|+++. +++++..+.+..+|..+.
T Consensus 152 ~~T~~dla~~~~~l~~~~--------~ls~~~~~~~~~~~~~~~ 187 (265)
T 2wk0_A 152 TSTARALATSLQAFALED--------KLPSEKRELLIDWMKRNT 187 (265)
T ss_dssp EEEHHHHHHHHHHHHTST--------TSCHHHHHHHHHHHHTCS
T ss_pred cCCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHcCC
Confidence 368999999999999864 689999999999998653
No 55
>1bsg_A Beta lactamase, penicillinase; hydrolase, antibiotic resistance; 1.85A {Streptomyces albus} SCOP: e.3.1.1
Probab=49.66 E-value=17 Score=25.43 Aligned_cols=35 Identities=17% Similarity=0.142 Sum_probs=29.7
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc 44 (101)
.+|.+|++++...|+++- +++++..+.+..+|...
T Consensus 157 ~~Ta~dla~~~~~l~~~~--------~l~~~~~~~~~~~~~~~ 191 (266)
T 1bsg_A 157 TTSPRAITRTYGRLVLGD--------ALNPRDRRLLTSWLLAN 191 (266)
T ss_dssp EECHHHHHHHHHHHHTSS--------SSCHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHhC
Confidence 368999999999999853 68899999999998765
No 56
>1w7f_A Beta-lactamase; hydrolase, isocitrate, bacillus licheniformis hydrolase; HET: ICT; 1.80A {Bacillus licheniformis}
Probab=46.11 E-value=22 Score=26.09 Aligned_cols=36 Identities=17% Similarity=0.141 Sum_probs=30.6
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhc
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCG 45 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcG 45 (101)
.+|..|+|++...|+++. +++++..+.+..+|....
T Consensus 194 ~tT~~d~a~l~~~l~~~~--------~ls~~~~~~l~~~m~~~~ 229 (307)
T 1w7f_A 194 TSTARALATSLQAFALED--------KLPSEKRELLIDWMKRNT 229 (307)
T ss_dssp EECHHHHHHHHHHHHTSS--------SSCHHHHHHHHHHHHTCS
T ss_pred eECHHHHHHHHHHHhcCC--------CCCHHHHHHHHHHHHhCC
Confidence 368999999999999863 689999999999998653
No 57
>1ci9_A ESTB, protein (carboxylesterase); hydrolase, caboxylesterase; HET: DFP; 1.80A {Burkholderia gladioli} SCOP: e.3.1.1 PDB: 1ci8_A*
Probab=42.96 E-value=17 Score=27.49 Aligned_cols=29 Identities=3% Similarity=-0.026 Sum_probs=23.7
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHH
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDV 37 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v 37 (101)
-.|++||++....|.|+ +++|+++.++..
T Consensus 278 ~sTa~Dl~~~~~~ll~~-------~~lls~~~~~~m 306 (392)
T 1ci9_A 278 YGSADDVLRALEAIRAN-------PGFLPETLADAA 306 (392)
T ss_dssp EECHHHHHHHHHHHHHC-------SSSSCHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCC-------CcccCHHHHHHH
Confidence 35899999999999885 678998877654
No 58
>3i7j_A Beta-lactamase MB2281C; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 2.20A {Mycobacterium bovis}
Probab=38.20 E-value=24 Score=26.05 Aligned_cols=75 Identities=17% Similarity=0.324 Sum_probs=44.7
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh--cc---c--ccccc----cee-e------------e
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC--GM---Y--DYSGQ----FAF-K------------V 57 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc--Gm---Y--d~SG~----fa~-~------------V 57 (101)
-.|++|||+++..|.+ +++|+++.++...+--... +. | ..... |.. + .
T Consensus 150 ~sta~Dla~~~~~ll~--------~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yGlGw~~~~~~~~~~~~~~~~~ 221 (280)
T 3i7j_A 150 TSTVADLAVFAGDLLR--------PSTVSAQMHADATTVQFPGLDGVLPGYGVQRPNDWGLGFEIRNSKSPHWTGECNST 221 (280)
T ss_dssp EECHHHHHHHHHHHHS--------CCSSCHHHHHHHTSCSSTTCCEEETTTEEESSCCBCSSSEECTTCSSCSSCTTSCT
T ss_pred eECHHHHHHHHHHHhc--------CCCCCHHHHHHHhccccCCccccccccccCCCCceeeeEEeccCCCCcccccCCCC
Confidence 3589999999999998 5689998877644321100 00 0 00011 111 1 1
Q ss_pred cceeeccCCceEEEEecCc-eEEEEEcC
Q psy8041 58 GLPAKSGVSGSMLVVVPNT-MGIALFFR 84 (101)
Q Consensus 58 GlPaKSGVsGgIlavvPg~-~gIav~SP 84 (101)
+.=..+|-.|..+.+.|.. .+|.+++=
T Consensus 222 ~~~gh~G~~g~~~~~~P~~~~~vv~ltN 249 (280)
T 3i7j_A 222 RTFGHFGQSGGFIWVDPKADLALVVLTA 249 (280)
T ss_dssp TCEEEEETTTEEEEEETTTTEEEEEEES
T ss_pred CEEEecCcCCeEEEEEeCCCEEEEEEEC
Confidence 2234678888999998875 46777763
No 59
>3isg_A Penicillinase, beta-lactamase OXA-1; hydrolase, lysine carboxylation, antibiotic resistance; HET: KCX DRW; 1.40A {Escherichia coli} SCOP: e.3.1.1 PDB: 1m6k_A*
Probab=36.42 E-value=32 Score=25.61 Aligned_cols=36 Identities=8% Similarity=0.121 Sum_probs=30.7
Q ss_pred CcccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHh
Q psy8041 1 METTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHS 43 (101)
Q Consensus 1 i~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~t 43 (101)
+.+|..|+|.+-..|+|+ ++.+++++.+.|+..|..
T Consensus 143 l~isp~eqa~~l~~~~~~-------~l~~s~~~~~~v~~~m~~ 178 (251)
T 3isg_A 143 LKISPEEQIQFLRKIINH-------NLPVKNSAIENTIENMYL 178 (251)
T ss_dssp CCBCHHHHHHHHHHHHTT-------CSSSCHHHHHHHHHHTEE
T ss_pred ceECHHHHHHHHHHhhcC-------CcCCCHHHHHHHHHhhee
Confidence 468999999999999864 456999999999999976
No 60
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=29.19 E-value=36 Score=20.76 Aligned_cols=24 Identities=17% Similarity=0.387 Sum_probs=20.8
Q ss_pred CCCCCCceeechhhHHHHHHHHHh
Q psy8041 20 ICPITEEKVLRSESVRDVLSLMHS 43 (101)
Q Consensus 20 ~~p~tge~vl~~~~~r~v~alM~t 43 (101)
+||.=||.++++++++++.++|..
T Consensus 38 ~C~~CGE~~~~~e~~~~~~~~~~~ 61 (78)
T 3ga8_A 38 YCVHCEESIMNKEESDAFMAQVKA 61 (78)
T ss_dssp EETTTCCEECCHHHHHHHHHHHHH
T ss_pred ECCCCCCEEECHHHHHHHHHHHHH
Confidence 578889999999999999888863
No 61
>2zjr_Z 50S ribosomal protein L32; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: g.41.8.5 PDB: 1j5a_M* 1jzy_M* 1jzz_M* 1k01_M* 1nkw_Z 1ond_Z* 1sm1_Z* 1yl3_5 2b66_5 2b9n_5 2b9p_5 2zjp_Y* 2zjq_Z 1jzx_M 3cf5_Y* 3dll_Y* 3pio_Z* 3pip_Z* 1nwy_Z* 1nwx_Z* ...
Probab=28.90 E-value=17 Score=22.14 Aligned_cols=25 Identities=32% Similarity=0.507 Sum_probs=19.9
Q ss_pred CCCCCCCCceeechhhHHHHHHHHHhhccccc
Q psy8041 18 GGICPITEEKVLRSESVRDVLSLMHSCGMYDY 49 (101)
Q Consensus 18 ~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~ 49 (101)
--.||..||..++...+ ..||+|..
T Consensus 30 l~~c~~cG~~~~pH~vc-------~~CG~Y~g 54 (60)
T 2zjr_Z 30 LTECPQCHGKKLSHHIC-------PNCGYYDG 54 (60)
T ss_dssp CEECTTTCCEECTTBCC-------TTTCBSSS
T ss_pred ceECCCCCCEeCCceEc-------CCCCcCCC
Confidence 34589899999999887 47999964
No 62
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=28.54 E-value=19 Score=21.14 Aligned_cols=21 Identities=24% Similarity=0.333 Sum_probs=14.7
Q ss_pred HHHHHHhCCCCCCCCCceeec
Q psy8041 10 VIAATLANGGICPITEEKVLR 30 (101)
Q Consensus 10 ~~~a~LAn~G~~p~tge~vl~ 30 (101)
.+-..|..+|.||+|++++-.
T Consensus 30 ~I~~~l~~~~~cP~t~~~L~~ 50 (61)
T 2bay_A 30 LLEQYVKDTGNDPITNEPLSI 50 (61)
T ss_dssp HHHHHHHHHSBCTTTCCBCCG
T ss_pred HHHHHHHhCCCCcCCcCCCCh
Confidence 344556667899999987643
No 63
>3tg9_A Penicillin-binding protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.20A {Bacillus halodurans}
Probab=28.17 E-value=44 Score=25.11 Aligned_cols=28 Identities=14% Similarity=0.157 Sum_probs=22.7
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHH
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDV 37 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v 37 (101)
-.|++|||+.+..|.|+ ++|+++.++..
T Consensus 231 ~sT~~Dl~~~~~~ll~~--------~lls~~~~~~~ 258 (356)
T 3tg9_A 231 YVTAEDMMKLWLALMRH--------ELLNETYTQKL 258 (356)
T ss_dssp EECHHHHHHHHHHHHTT--------SSSCHHHHHHH
T ss_pred EECHHHHHHHHHHHhcC--------CCCCHHHHHHH
Confidence 36899999999999985 68888877654
No 64
>2drw_A DAA, D-amino acid amidase; penicillin recognizing protein, D-stereospecific, hydrophobic, hydrolase; 2.10A {Ochrobactrum anthropi} SCOP: e.3.1.1 PDB: 2dns_A 2efu_A* 2efx_A*
Probab=28.05 E-value=39 Score=25.44 Aligned_cols=28 Identities=14% Similarity=0.285 Sum_probs=22.5
Q ss_pred ccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHH
Q psy8041 3 TTCESFSVIAATLANGGICPITEEKVLRSESVRDVL 38 (101)
Q Consensus 3 v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~ 38 (101)
.|.+||++.+..|.++ ++|+++.++...
T Consensus 247 sT~~Dl~~~~~~ll~g--------~lls~~~~~~m~ 274 (363)
T 2drw_A 247 STPRDIVKFLNALFDG--------RILDQKRLWEMK 274 (363)
T ss_dssp ECHHHHHHHHHHHHTT--------SSSCHHHHHHHH
T ss_pred eCHHHHHHHHHHHhcC--------CCCCHHHHHHHh
Confidence 5899999999999864 588988776543
No 65
>1yqs_A D-alanyl-D-alanine carboxypeptidase; cell well biosynthesis, beta-lactam, beta-sultam, sulfonylation, hydrolase; HET: BSA; 1.05A {Streptomyces SP} SCOP: e.3.1.1 PDB: 1cef_A* 1ceg_A* 1ikg_A* 1iki_A* 1hvb_A* 1pw1_A* 1pw8_A* 1mpl_A* 1pwd_A* 1pwc_A* 1scw_A* 1pwg_A* 3pte_A 1sde_A*
Probab=27.62 E-value=49 Score=24.75 Aligned_cols=28 Identities=7% Similarity=0.318 Sum_probs=22.5
Q ss_pred cccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHH
Q psy8041 2 ETTCESFSVIAATLANGGICPITEEKVLRSESVRDV 37 (101)
Q Consensus 2 ~v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v 37 (101)
-.|.+||++.+..|.++ ++|+++.++..
T Consensus 241 ~sT~~Dl~~~~~~ll~g--------~lls~~~~~~m 268 (349)
T 1yqs_A 241 ISSTQDLDTFFSALMSG--------QLMSAAQLAQM 268 (349)
T ss_dssp EECHHHHHHHHHHHHTT--------CSSCHHHHHHH
T ss_pred EeCHHHHHHHHHHHhcC--------CCCCHHHHHHH
Confidence 35899999999999874 58888877654
No 66
>3v2d_5 50S ribosomal protein L32; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_4 2hgj_4 2hgu_4 2j03_5 2jl6_5 2jl8_5 2v47_5 2v49_5 2wdi_5 2wdj_5 2wdl_5 2wdn_5 2wh2_5 2wh4_5 2wrj_5 2wrl_5 2wro_5 2wrr_5 2x9s_5 2x9u_5 ...
Probab=25.68 E-value=15 Score=22.44 Aligned_cols=26 Identities=19% Similarity=0.263 Sum_probs=19.7
Q ss_pred CCCCCCCCCceeechhhHHHHHHHHHhhccccc
Q psy8041 17 NGGICPITEEKVLRSESVRDVLSLMHSCGMYDY 49 (101)
Q Consensus 17 n~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~ 49 (101)
+--.||..||..++...+. .||+|..
T Consensus 29 ~l~~c~~cGe~~~~H~vc~-------~CG~Y~g 54 (60)
T 3v2d_5 29 TLVPCPECKAMKPPHTVCP-------ECGYYAG 54 (60)
T ss_dssp CCEECTTTCCEECTTSCCT-------TTCEETT
T ss_pred ceeECCCCCCeecceEEcC-------CCCcCCC
Confidence 3346898999999988754 6888864
No 67
>4ewf_A Beta-lactamase; ABA-sandwich, structural genomics, midwest center for struct genomics (MCSG), PSI-biology, cytoplasmic, hydrolase; 2.00A {Sphaerobacter thermophilus}
Probab=25.44 E-value=82 Score=22.61 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=28.0
Q ss_pred ccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhh
Q psy8041 3 TTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSC 44 (101)
Q Consensus 3 v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tc 44 (101)
.|.+|+|++...|.++ +.++++..+..+.+|...
T Consensus 162 tTa~d~a~ll~~l~~~--------~~l~~~~~~~~~~~l~~~ 195 (275)
T 4ewf_A 162 ATPDDYALAVQALLEG--------RAASQESCTAMLAMLEKQ 195 (275)
T ss_dssp ECHHHHHHHHHHHHTT--------CSSCHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHHHcC--------CCCCHHHHHHHHHHHhcC
Confidence 5889999999999875 368889999998888643
No 68
>3cjm_A Putative beta-lactamase; NP_815223.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; HET: MSE; 1.50A {Enterococcus faecalis}
Probab=24.66 E-value=1.2e+02 Score=22.38 Aligned_cols=67 Identities=15% Similarity=0.179 Sum_probs=39.3
Q ss_pred ccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeecce-----eeccCCce---EEEE--
Q psy8041 3 TTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLP-----AKSGVSGS---MLVV-- 72 (101)
Q Consensus 3 v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlP-----aKSGVsGg---Ilav-- 72 (101)
.|.+|+|++...|.++- .++++ .+.+..+|... .+.-..+.|+| .|+|-..+ -+++
T Consensus 176 tTa~d~a~ll~~l~~~~--------~l~~~-~~~l~~~m~~~-----~~~~~l~~~lp~~~v~~KTG~~~~~~~dvgiv~ 241 (282)
T 3cjm_A 176 FSSEDALVILQKLYTEK--------ATKPD-YQAIYDSMKQS-----VFHERMETPTTQGKVAHKIGSYDEFIHDMGILE 241 (282)
T ss_dssp ECHHHHHHHHHHHHHHT--------TTCHH-HHHHHHHHHSC-----SCCCTTCCTTTTTSEEEEEEEETTEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHcCC--------CCCHH-HHHHHHHHHcC-----cccccccccCCCCeEEecccCCCCcEEEEEEEe
Confidence 68899999999988753 35554 44567777642 11222345666 57765433 1223
Q ss_pred ecCceEEEEEc
Q psy8041 73 VPNTMGIALFF 83 (101)
Q Consensus 73 vPg~~gIav~S 83 (101)
.|...-|+||.
T Consensus 242 ~~~~~iiaVl~ 252 (282)
T 3cjm_A 242 TPHPFALAIFT 252 (282)
T ss_dssp SSSCEEEEEEE
T ss_pred cCCCEEEEEEe
Confidence 25566666665
No 69
>4dxb_A RG13, maltose-binding periplasmic protein, beta-lactama chimera; TEM, beta-lactamase, MBP, allosteric regulation, zinc bindin maltose binding; 2.29A {Escherichia coli} PDB: 4dxc_A
Probab=23.50 E-value=58 Score=26.56 Aligned_cols=47 Identities=19% Similarity=0.222 Sum_probs=36.1
Q ss_pred ccHHHHHHHHHHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccceeeeccee
Q psy8041 3 TTCESFSVIAATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAFKVGLPA 61 (101)
Q Consensus 3 v~~~dLA~~~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~~VGlPa 61 (101)
.|.+|+|++-..|.++- +|+++..++++.+|.-+-.. .-..+.|+|.
T Consensus 537 tTp~~~~~~l~~l~~g~--------~l~~~~~~~l~~~m~~~~~~----~~~~~~~lp~ 583 (637)
T 4dxb_A 537 TMPVAMATTLRKLLTGE--------LLTLASRQQLIDWMEADKVA----GPLLRSALPA 583 (637)
T ss_dssp ECHHHHHHHHHHHSSTT--------SSCHHHHHHHHHHHHHHHHH----SSTTTTTSCC
T ss_pred CCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHcCCcc----chhhhhcCCC
Confidence 57899999999998763 79999999999999866432 3335667773
No 70
>1ysp_A Transcriptional regulator KDGR; ICLR, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Escherichia coli}
Probab=22.96 E-value=1.7e+02 Score=19.43 Aligned_cols=50 Identities=16% Similarity=0.124 Sum_probs=35.3
Q ss_pred HHHhCCCCCCCCCceeechhhHHHHHHHHHhhccccccccce---eeecceee
Q psy8041 13 ATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFA---FKVGLPAK 62 (101)
Q Consensus 13 a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa---~~VGlPaK 62 (101)
..|.+....+.|...+.+.+..+.-++....-|.--..+||. .-++.|-.
T Consensus 78 ~~l~~~~~~~~t~~t~~~~~~l~~~l~~iR~~Gya~~~~e~~~g~~~vAaPv~ 130 (181)
T 1ysp_A 78 QILEGVEYKRSTERTITSTEALLPVLDQVREQGYGEDNEEQEEGLRCIAVPVF 130 (181)
T ss_dssp HHHTTCCCCCCSTTCCCSHHHHHHHHHHHHHHTCEEEESSSSTTBEEEEEEEE
T ss_pred HHHhcCCCcCCCCCCCCCHHHHHHHHHHHHHhCCeEEccccccCCEEEEEEEE
Confidence 456666677778888888888888888888888766666663 23455554
No 71
>3q01_A Cellular tumor antigen P53; beta sandwich, multidomain, oligomerization, TP53, TUMO suppressor, dimer, DNA binding, antitumor protein; 2.10A {Homo sapiens} PDB: 3q05_A* 3ts8_A 3q06_A* 1a1u_A
Probab=22.53 E-value=27 Score=26.66 Aligned_cols=34 Identities=21% Similarity=0.477 Sum_probs=23.3
Q ss_pred ccccccceeeecceeeccCCceEEEEecCceEEEEEcCCCCccc
Q psy8041 47 YDYSGQFAFKVGLPAKSGVSGSMLVVVPNTMGIALFFRTTQNVF 90 (101)
Q Consensus 47 Yd~SG~fa~~VGlPaKSGVsGgIlavvPg~~gIav~SP~LD~~g 90 (101)
-|+.|.|-|+|++.. ||. .+..=-.|||.|++-.
T Consensus 8 ~~ypG~~~F~v~f~~-s~t---------~Ks~twtYS~~LnKLf 41 (233)
T 3q01_A 8 KTYQGSYGFRLGFLH-SGT---------AKSVTCTYSPALNKMF 41 (233)
T ss_dssp CCBCTTTTCEEECCC-CCC---------CTTCSEEEETTTTEEE
T ss_pred CCcCCcceEEEEecc-CCC---------CCCCCeEEchhhCeeE
Confidence 478899999999953 432 2223467999998643
No 72
>2g7u_A Transcriptional regulator; ICLR family, structural genomics, PSI, protein structure initiative, midwest center for struc genomics; 2.30A {Rhodococcus SP}
Probab=20.72 E-value=1.9e+02 Score=20.71 Aligned_cols=51 Identities=12% Similarity=0.139 Sum_probs=37.0
Q ss_pred HHHHhCCCCCCCCCceeechhhHHHHHHHHHhhcccccccccee---eecceee
Q psy8041 12 AATLANGGICPITEEKVLRSESVRDVLSLMHSCGMYDYSGQFAF---KVGLPAK 62 (101)
Q Consensus 12 ~a~LAn~G~~p~tge~vl~~~~~r~v~alM~tcGmYd~SG~fa~---~VGlPaK 62 (101)
-..|+.....+.|...+.+++..+.-++....-|.--..+||.. -++.|-.
T Consensus 157 ~~~l~~~~l~~~t~~t~~~~~~l~~~l~~iR~~Gya~~~~e~~~g~~~iAaPI~ 210 (257)
T 2g7u_A 157 ERVVAESTFQKLGPETIGTAAELERELAKVREQGFALTSEELEKGLISLAAPVH 210 (257)
T ss_dssp HHHHHHCCCCCCSTTCCCSHHHHHHHHHHHHHHSSEEEESSSSTTEEEEEEEEE
T ss_pred HHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHhCCEEeccccccCCEEEEEEEE
Confidence 34566667778888888888888888888888887766677642 3455554
Done!