AmiGO: BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>psy8042
ISGTAAKLGRPSSYHHCTLLVNVNKSRLSQSLHHHAINSCPEDLVKTLSKSFILDLIGWQ
RSFSDLVKWIRLPMTNWISPTFHVPIGIED
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with Lipt1 Lipt1 Lipt1 lipoyltransferase 1	protein from Mus musculus	5.5e-08
BLAST match view associations BLAST with Lipt1 Lipt1 Lipt1 lipoyltransferase 1	gene from Rattus norvegicus	1.1e-07
BLAST match view associations BLAST with LIPT1 LIPT1 LIPT1 Uncharacterized protein	protein from Gallus gallus	4.0e-06
BLAST match view associations BLAST with lipt1 lipt1 lipt1 lipoyltransferase 1	gene_product from Danio rerio	4.5e-06
BLAST match view associations BLAST with LIPT1 LIPT1 LIPT1 Uncharacterized protein	protein from Canis lupus familiaris	8.8e-06
BLAST match view associations BLAST with LIPT1 LIPT1 LIPT1 Lipoyltransferase 1, mitochondrial	protein from Homo sapiens	0.00011
BLAST match view associations BLAST with LIPT1 LIPT1 LIPT1 Lipoyltransferase 1, mitochondrial	protein from Homo sapiens	0.00022
BLAST match view associations BLAST with LIPT1 LIPT1 LIPT1 Lipoyltransferase 1, mitochondrial	protein from Bos taurus	0.00046
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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy8042
        (90 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

MGI|MGI:3645211 - symbol:Lipt1 "lipoyltransferase 1" spec...   112  5.5e-08   2
RGD|1310276 - symbol:Lipt1 "lipoyltransferase 1" species:...   113  1.1e-07   2
UNIPROTKB|E1BVP4 - symbol:LIPT1 "Uncharacterized protein"...   114  4.0e-06   1
ZFIN|ZDB-GENE-060929-112 - symbol:lipt1 "lipoyltransferas...   114  4.5e-06   1
UNIPROTKB|E2RPI5 - symbol:LIPT1 "Uncharacterized protein"...   111  8.8e-06   1
UNIPROTKB|C9JUU5 - symbol:LIPT1 "Lipoyltransferase 1, mit...    98  0.00011   1
UNIPROTKB|Q9Y234 - symbol:LIPT1 "Lipoyltransferase 1, mit...    98  0.00022   1
UNIPROTKB|O46419 - symbol:LIPT1 "Lipoyltransferase 1, mit...    95  0.00046   1


>MGI|MGI:3645211 [details] [associations]
            symbol:Lipt1 "lipoyltransferase 1" species:10090 "Mus
            musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003824
            "catalytic activity" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0006464 "cellular protein modification process"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0009249 "protein lipoylation" evidence=IEA] [GO:0016740
            "transferase activity" evidence=IEA] [GO:0016746 "transferase
            activity, transferring acyl groups" evidence=IEA]
            InterPro:IPR004143 InterPro:IPR004562 Pfam:PF03099 MGI:MGI:3645211
            GO:GO:0005739 GO:GO:0009249 GO:GO:0016746 eggNOG:COG0095 CTD:51601
            GeneTree:ENSGT00390000008846 HOGENOM:HOG000260595
            HOVERGEN:HBG028203 KO:K10105 OMA:SEERYQN OrthoDB:EOG49KFQN
            UniPathway:UPA00537 TIGRFAMs:TIGR00545 EMBL:BC019519
            IPI:IPI00122307 RefSeq:NP_001033007.2 UniGene:Mm.389100
            ProteinModelPortal:Q8VCM4 SMR:Q8VCM4 STRING:Q8VCM4
            PhosphoSite:Q8VCM4 PaxDb:Q8VCM4 PRIDE:Q8VCM4 DNASU:623661
            Ensembl:ENSMUST00000041621 GeneID:623661 KEGG:mmu:623661
            UCSC:uc007ash.2 InParanoid:Q8VCM4 NextBio:417245 Bgee:Q8VCM4
            CleanEx:MM_LIPT1 Genevestigator:Q8VCM4
            GermOnline:ENSMUSG00000037216 Uniprot:Q8VCM4
        Length = 373

 Score = 112 (44.5 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
 Identities = 20/32 (62%), Positives = 27/32 (84%)

Query:     1 ISGTAAKLGRPSSYHHCTLLVNVNKSRLSQSL 32
             ISGTA+K+GR ++YHHCTLL + N++ LS SL
Sbjct:   162 ISGTASKIGRTAAYHHCTLLCSTNRTALSSSL 193

 Score = 39 (18.8 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
 Identities = 14/55 (25%), Positives = 24/55 (43%)

Query:    33 HHHAINSCPEDLVKTLSKSFILDLIGWQRSFSDLVKWI--RLPMTNWISPTFHVP 85
             H + IN   E +   +++  + +L  W+        W+  R P    +  TFHVP
Sbjct:   244 HVNLINPADETMFPGINRK-VKELQSWE--------WVYGRTPKFT-VDTTFHVP 288


>RGD|1310276 [details] [associations]
            symbol:Lipt1 "lipoyltransferase 1" species:10116 "Rattus
            norvegicus" [GO:0005739 "mitochondrion" evidence=IEA;ISO]
            [GO:0009249 "protein lipoylation" evidence=IEA] [GO:0016740
            "transferase activity" evidence=IEA] InterPro:IPR004143
            InterPro:IPR004562 Pfam:PF03099 RGD:1310276 GO:GO:0005739
            GO:GO:0016740 GO:GO:0009249 EMBL:CH473965 CTD:51601
            GeneTree:ENSGT00390000008846 KO:K10105 OrthoDB:EOG49KFQN
            TIGRFAMs:TIGR00545 OMA:INLINPT IPI:IPI00194893
            RefSeq:NP_001101682.1 UniGene:Rn.229394 Ensembl:ENSRNOT00000024896
            GeneID:316342 KEGG:rno:316342 UCSC:RGD:1310276 NextBio:670739
            Uniprot:D3Z7Z4
        Length = 371

 Score = 113 (44.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 22/41 (53%), Positives = 31/41 (75%)

Query:     1 ISGTAAKLGRPSSYHHCTLLVNVNKSRLSQSLH--HHAINS 39
             ISGTA+K+GR ++YHHCTLL + +++ LS SL   +H I S
Sbjct:   162 ISGTASKIGRTAAYHHCTLLCSTDRTALSSSLKSPYHGIKS 202

 Score = 35 (17.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 16/57 (28%), Positives = 24/57 (42%)

Query:    33 HHHAINSCPEDLVKTLSKSFILDLIGWQRSFSDLVKWI--RLPMTNWISPTFHVPIG 87
             H + IN   E +   ++ S I +L  W+        W+  R P    +   FHVP G
Sbjct:   244 HVNLINPADETVFPGIN-SKIKELQSWE--------WVYGRTPRFT-VDTMFHVPHG 290


>UNIPROTKB|E1BVP4 [details] [associations]
            symbol:LIPT1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0009249 "protein lipoylation" evidence=IEA] [GO:0016740
            "transferase activity" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] InterPro:IPR004143 InterPro:IPR004562 Pfam:PF03099
            GO:GO:0005739 GO:GO:0016740 GO:GO:0009249 CTD:51601
            GeneTree:ENSGT00390000008846 KO:K10105 OMA:SEERYQN
            TIGRFAMs:TIGR00545 EMBL:AADN02017694 IPI:IPI00593770
            RefSeq:XP_416893.1 UniGene:Gga.11145 ProteinModelPortal:E1BVP4
            PRIDE:E1BVP4 Ensembl:ENSGALT00000027059 GeneID:418697
            KEGG:gga:418697 NextBio:20821845 Uniprot:E1BVP4
        Length = 373

 Score = 114 (45.2 bits), Expect = 4.0e-06, P = 4.0e-06
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query:     1 ISGTAAKLGRPSSYHHCTLLVNVNKSRLSQSL 32
             ISGTAAKLGR ++YHHCTLL N NK  LS  L
Sbjct:   162 ISGTAAKLGRTTAYHHCTLLCNANKVVLSSVL 193


>ZFIN|ZDB-GENE-060929-112 [details] [associations]
            symbol:lipt1 "lipoyltransferase 1" species:7955
            "Danio rerio" [GO:0006464 "cellular protein modification process"
            evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
            [GO:0009249 "protein lipoylation" evidence=IEA] [GO:0003824
            "catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR004143 InterPro:IPR004562 Pfam:PF03099
            ZFIN:ZDB-GENE-060929-112 GO:GO:0016740 GO:GO:0009249
            HOGENOM:HOG000260595 HOVERGEN:HBG028203 TIGRFAMs:TIGR00545
            EMBL:BC042323 IPI:IPI00511631 UniGene:Dr.81073
            ProteinModelPortal:Q8AWD3 STRING:Q8AWD3 InParanoid:Q8AWD3
            ArrayExpress:Q8AWD3 Uniprot:Q8AWD3
        Length = 401

 Score = 114 (45.2 bits), Expect = 4.5e-06, P = 4.5e-06
 Identities = 23/32 (71%), Positives = 27/32 (84%)

Query:     1 ISGTAAKLGRPSSYHHCTLLVNVNKSRLSQSL 32
             ISGTAAKLGR S+YHHCTLL +V++S LS  L
Sbjct:   193 ISGTAAKLGRSSAYHHCTLLCSVDRSVLSSVL 224


>UNIPROTKB|E2RPI5 [details] [associations]
            symbol:LIPT1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0016740 "transferase activity" evidence=IEA] [GO:0009249
            "protein lipoylation" evidence=IEA] InterPro:IPR004143
            InterPro:IPR004562 Pfam:PF03099 GO:GO:0005739 GO:GO:0016740
            GO:GO:0009249 GeneTree:ENSGT00390000008846 TIGRFAMs:TIGR00545
            OMA:INLINPT EMBL:AAEX03007446 EMBL:AAEX03007447
            Ensembl:ENSCAFT00000003602 Uniprot:E2RPI5
        Length = 381

 Score = 111 (44.1 bits), Expect = 8.8e-06, P = 8.8e-06
 Identities = 23/55 (41%), Positives = 36/55 (65%)

Query:     1 ISGTAAKLGRPSSYHHCTLLVNVNKSRLSQSLH--HHAINSCPEDLVKTLSKSFI 53
             ISGTA+K+GR ++YHHCTLL + N++ LS SL   +  I S     + ++ K+ +
Sbjct:   170 ISGTASKIGRTTAYHHCTLLCSTNRTFLSSSLKSPYQGIRSNATTSIPSIVKNLL 224


>UNIPROTKB|C9JUU5 [details] [associations]
            symbol:LIPT1 "Lipoyltransferase 1, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003824 "catalytic activity"
            evidence=IEA] [GO:0006464 "cellular protein modification process"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            InterPro:IPR004143 Pfam:PF03099 GO:GO:0005739 GO:GO:0003824
            GO:GO:0006464 HOGENOM:HOG000260595 EMBL:AC092587 HGNC:HGNC:29569
            IPI:IPI00917129 ProteinModelPortal:C9JUU5 SMR:C9JUU5 STRING:C9JUU5
            Ensembl:ENST00000434566 ArrayExpress:C9JUU5 Bgee:C9JUU5
            Uniprot:C9JUU5
        Length = 251

 Score = 98 (39.6 bits), Expect = 0.00011, P = 0.00011
 Identities = 25/55 (45%), Positives = 34/55 (61%)

Query:     1 ISGTAAKLGRPSSYHHCTLLVNVNKSRLS-------QSLHHHAINSCPEDLVKTL 48
             ISGTA+K+GR ++YHHCTLL + + + LS       Q +  +A  S P  LVK L
Sbjct:   162 ISGTASKIGRTTAYHHCTLLCSTDGTFLSSLLKSPYQGIRSNATASIPS-LVKNL 215


>UNIPROTKB|Q9Y234 [details] [associations]
            symbol:LIPT1 "Lipoyltransferase 1, mitochondrial"
            species:9606 "Homo sapiens" [GO:0009249 "protein lipoylation"
            evidence=IEA] [GO:0016746 "transferase activity, transferring acyl
            groups" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0006464 "cellular protein modification process" evidence=TAS]
            [GO:0006629 "lipid metabolic process" evidence=TAS]
            InterPro:IPR004143 InterPro:IPR004562 Pfam:PF03099 GO:GO:0005739
            GO:GO:0006629 GO:GO:0006464 GO:GO:0009249 EMBL:CH471127
            GO:GO:0016746 DrugBank:DB00166 eggNOG:COG0095 CTD:51601
            HOGENOM:HOG000260595 HOVERGEN:HBG028203 KO:K10105 OMA:SEERYQN
            OrthoDB:EOG49KFQN UniPathway:UPA00537 TIGRFAMs:TIGR00545
            EMBL:AB017566 EMBL:AB017567 EMBL:AC092587 EMBL:BC007001
            EMBL:BC009772 EMBL:BC070145 IPI:IPI00006375 RefSeq:NP_001191759.1
            RefSeq:NP_057013.1 RefSeq:NP_660198.1 RefSeq:NP_660199.1
            RefSeq:NP_660200.1 UniGene:Hs.719172 UniGene:Hs.739177
            ProteinModelPortal:Q9Y234 SMR:Q9Y234 IntAct:Q9Y234
            MINT:MINT-1385603 STRING:Q9Y234 PhosphoSite:Q9Y234 DMDM:25167326
            PaxDb:Q9Y234 PeptideAtlas:Q9Y234 PRIDE:Q9Y234 DNASU:51601
            Ensembl:ENST00000340066 Ensembl:ENST00000393471
            Ensembl:ENST00000393473 Ensembl:ENST00000393474
            Ensembl:ENST00000393477 GeneID:51601 KEGG:hsa:51601 UCSC:uc002szm.4
            GeneCards:GC02P099771 HGNC:HGNC:29569 HPA:HPA034802 MIM:610284
            neXtProt:NX_Q9Y234 PharmGKB:PA134940073 InParanoid:Q9Y234
            PhylomeDB:Q9Y234 GenomeRNAi:51601 NextBio:55467 ArrayExpress:Q9Y234
            Bgee:Q9Y234 Genevestigator:Q9Y234 GermOnline:ENSG00000144182
            Uniprot:Q9Y234
        Length = 373

 Score = 98 (39.6 bits), Expect = 0.00022, P = 0.00022
 Identities = 25/55 (45%), Positives = 34/55 (61%)

Query:     1 ISGTAAKLGRPSSYHHCTLLVNVNKSRLS-------QSLHHHAINSCPEDLVKTL 48
             ISGTA+K+GR ++YHHCTLL + + + LS       Q +  +A  S P  LVK L
Sbjct:   162 ISGTASKIGRTTAYHHCTLLCSTDGTFLSSLLKSPYQGIRSNATASIPS-LVKNL 215


>UNIPROTKB|O46419 [details] [associations]
            symbol:LIPT1 "Lipoyltransferase 1, mitochondrial"
            species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0016746 "transferase activity, transferring acyl groups"
            evidence=IEA] [GO:0009249 "protein lipoylation" evidence=IEA]
            InterPro:IPR004143 InterPro:IPR004562 Pfam:PF03099 GO:GO:0005739
            GO:GO:0009249 GO:GO:0016746 eggNOG:COG0095 EMBL:AB006441
            IPI:IPI00710592 RefSeq:NP_777220.1 UniGene:Bt.4519 PDB:2E5A
            PDB:3A7U PDBsum:2E5A PDBsum:3A7U ProteinModelPortal:O46419
            SMR:O46419 STRING:O46419 Ensembl:ENSBTAT00000005171 GeneID:286864
            KEGG:bta:286864 CTD:51601 GeneTree:ENSGT00390000008846
            HOGENOM:HOG000260595 HOVERGEN:HBG028203 InParanoid:O46419 KO:K10105
            OMA:SEERYQN OrthoDB:EOG49KFQN UniPathway:UPA00537
            EvolutionaryTrace:O46419 NextBio:20806513 TIGRFAMs:TIGR00545
            Uniprot:O46419
        Length = 373

 Score = 95 (38.5 bits), Expect = 0.00046, P = 0.00046
 Identities = 25/55 (45%), Positives = 33/55 (60%)

Query:     1 ISGTAAKLGRPSSYHHCTLLVNVNKSRLS-------QSLHHHAINSCPEDLVKTL 48
             ISGTA+K+GR ++YHHCTLL   + + LS       Q +  +A  S P  LVK L
Sbjct:   162 ISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLKSPYQGIRSNATASTPA-LVKNL 215


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.434    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       90        90   0.00091  102 3  11 22  0.46    29
                                                     29  0.39    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  571 (61 KB)
  Total size of DFA:  123 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.57u 0.08s 10.65t   Elapsed:  00:00:02
  Total cpu time:  10.58u 0.08s 10.66t   Elapsed:  00:00:02
  Start:  Thu Aug 15 11:07:48 2013   End:  Thu Aug 15 11:07:50 2013
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the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
