Query psy8045
Match_columns 115
No_of_seqs 111 out of 153
Neff 4.3
Searched_HMMs 29240
Date Fri Aug 16 17:01:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8045.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8045hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dce_A KIAA1915 protein; swirm 66.0 3.1 0.00011 29.0 2.1 17 73-89 25-41 (111)
2 2fq3_A Transcription regulator 43.8 4 0.00014 28.2 -0.4 18 73-90 23-40 (104)
3 3u85_B Histone-lysine N-methyl 38.1 11 0.00038 19.3 0.8 11 50-60 3-13 (21)
4 1uer_A SOD, superoxide dismuta 30.1 13 0.00045 27.8 0.5 30 67-103 151-180 (191)
5 1kkc_A Mnsod, manganese supero 28.7 18 0.00061 27.7 1.0 29 67-102 168-196 (221)
6 1ids_A Iron superoxide dismuta 28.7 15 0.00051 27.9 0.6 29 67-102 154-182 (207)
7 3js4_A Superoxide dismutase; n 28.0 18 0.00063 27.8 1.0 30 67-103 180-209 (227)
8 3ak2_A Superoxide dismutase [M 28.0 19 0.00063 27.5 1.0 29 67-102 159-187 (214)
9 3dc5_A Superoxide dismutase [M 27.5 19 0.00066 27.1 1.0 30 67-103 150-179 (195)
10 3tqj_A Superoxide dismutase [F 27.4 19 0.00066 27.5 1.0 30 67-103 151-180 (210)
11 2nyb_A Superoxide dismutase [F 27.1 20 0.00068 26.8 1.0 30 67-103 150-179 (192)
12 1unf_X Iron superoxide dismuta 26.7 20 0.00069 27.6 1.0 30 67-103 189-218 (238)
13 1xre_A SODA-2, superoxide dism 26.7 20 0.00069 27.4 1.0 29 67-102 168-196 (217)
14 2awp_A Iron super-oxide dismut 26.7 16 0.00056 27.4 0.5 29 67-102 152-180 (198)
15 1r4w_A Glutathione S-transfera 26.5 99 0.0034 22.0 4.7 29 7-35 115-143 (226)
16 3kky_A Mnsod, superoxide dismu 26.4 18 0.00062 27.4 0.6 30 67-103 167-196 (211)
17 3kzq_A Putative uncharacterize 26.2 99 0.0034 21.5 4.6 30 7-36 105-134 (208)
18 4ffk_A Superoxide dismutase; o 26.1 18 0.00063 27.8 0.6 30 67-103 172-201 (223)
19 3rn4_A Superoxide dismutase [M 25.9 21 0.00073 27.2 1.0 30 67-103 170-199 (215)
20 1mng_A Manganese superoxide di 25.1 23 0.00078 26.7 1.0 29 67-102 160-188 (203)
21 1dt0_A Superoxide dismutase; p 25.0 23 0.00078 26.6 1.0 28 67-101 150-177 (197)
22 1ma1_A Superoxide dismutase; m 24.9 28 0.00097 26.2 1.5 29 67-102 161-189 (205)
23 2gpc_A Iron superoxide dismuta 24.9 23 0.00079 26.5 1.0 30 67-103 154-183 (194)
24 2rcv_A Superoxide dismutase [M 24.8 23 0.00079 26.6 1.0 29 67-102 158-186 (202)
25 3fz5_A Possible 2-hydroxychrom 24.8 73 0.0025 22.4 3.6 30 7-36 109-138 (202)
26 1my6_A Iron (III) superoxide d 24.6 23 0.0008 26.6 1.0 30 67-103 155-184 (199)
27 1bsm_A Superoxide dismutase; o 24.0 24 0.00083 26.5 1.0 30 67-103 155-184 (201)
28 1coj_A Protein (superoxide dis 23.9 25 0.00084 26.7 1.0 30 67-103 157-186 (212)
29 3h1s_A Superoxide dismutase; S 23.9 25 0.00085 26.4 1.0 30 67-103 153-182 (195)
30 1pl4_A Superoxide dismutase [M 23.7 25 0.00086 26.4 1.0 29 67-102 153-181 (198)
31 1ix9_A Mnsod, superoxide dismu 23.5 25 0.00086 26.5 1.0 30 67-103 161-190 (205)
32 2guz_B Mitochondrial import in 23.0 32 0.0011 21.4 1.2 23 32-61 22-44 (65)
33 1b06_A Protein (superoxide dis 22.7 29 0.00098 26.3 1.1 29 67-102 164-192 (210)
34 3gl5_A Putative DSBA oxidoredu 22.4 1.3E+02 0.0043 22.0 4.6 30 7-36 117-147 (239)
35 3rpp_A Glutathione S-transfera 21.8 1.3E+02 0.0046 21.8 4.7 27 10-36 118-144 (234)
36 4f2n_A Superoxide dismutase; s 21.6 29 0.00099 26.8 1.0 30 67-103 185-214 (230)
37 3lio_A Iron superoxide dismuta 21.5 29 0.001 25.9 1.0 30 67-103 151-180 (192)
38 3qvn_A Manganese-containing su 21.3 23 0.00079 26.7 0.4 30 67-103 164-193 (206)
39 2cw3_A Pmsod2, iron superoxide 20.8 30 0.001 27.6 1.0 29 67-102 235-263 (280)
40 1kn1_B Allophycocyanin; helix- 20.7 60 0.0021 23.3 2.5 27 30-62 48-74 (161)
41 2cw2_A Superoxide dismutase 1; 20.7 31 0.0011 26.5 1.0 29 67-102 181-209 (226)
42 3cei_A Superoxide dismutase; o 20.6 31 0.0011 26.3 1.0 30 67-103 150-179 (213)
No 1
>2dce_A KIAA1915 protein; swirm domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.02 E-value=3.1 Score=29.00 Aligned_cols=17 Identities=24% Similarity=0.516 Sum_probs=14.4
Q ss_pred ccCCchhhhhCcHHHHH
Q psy8045 73 DYWHPLERAQYPEYFKR 89 (115)
Q Consensus 73 D~Whp~eka~yp~yF~~ 89 (115)
|-=|++|++.+||+|.-
T Consensus 25 ~~ih~iEk~~lPefF~g 41 (111)
T 2dce_A 25 NIIQEEEKQAIPEFFEG 41 (111)
T ss_dssp SCCCHHHHTTSGGGGSC
T ss_pred ccCCHHHHHhChHHhcC
Confidence 34599999999999964
No 2
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=43.80 E-value=4 Score=28.24 Aligned_cols=18 Identities=33% Similarity=0.704 Sum_probs=15.1
Q ss_pred ccCCchhhhhCcHHHHHH
Q psy8045 73 DYWHPLERAQYPEYFKRR 90 (115)
Q Consensus 73 D~Whp~eka~yp~yF~~R 90 (115)
|.=|++|++.+||+|.-|
T Consensus 23 ~~Ih~iEk~~lPEfF~g~ 40 (104)
T 2fq3_A 23 EKIHSIEVQSLPEFFTNR 40 (104)
T ss_dssp TCCCHHHHHHCGGGCCSS
T ss_pred ccCCHHHHHHChHHhcCC
Confidence 445999999999999854
No 3
>3u85_B Histone-lysine N-methyltransferase MLL; menin, MEN1, JUND, ledgf, TPR, transcription, epigeneti cancer; 3.00A {Homo sapiens}
Probab=38.06 E-value=11 Score=19.32 Aligned_cols=11 Identities=36% Similarity=0.893 Sum_probs=8.7
Q ss_pred CcCCCCCCCcc
Q psy8045 50 IKFPTSPGGVA 60 (115)
Q Consensus 50 yi~P~~PGGtk 60 (115)
..||-.||||.
T Consensus 3 wrfparpg~s~ 13 (21)
T 3u85_B 3 WRFPARPGTTG 13 (26)
T ss_pred cccccCCCccc
Confidence 57889999874
No 4
>1uer_A SOD, superoxide dismutase; metal-specific, cambialistic, oxidoreductase; 1.60A {Porphyromonas gingivalis} SCOP: a.2.11.1 d.44.1.1 PDB: 1qnn_A 1ues_A
Probab=30.12 E-value=13 Score=27.80 Aligned_cols=30 Identities=30% Similarity=0.387 Sum_probs=23.9
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-+
T Consensus 151 ~PlL~iDvW---EHAYyldY~n~----R~~Yv~~~w~ 180 (191)
T 1uer_A 151 NPLLGFDVW---EHAYYLTYQNR----RADHLKDLWS 180 (191)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHGG
T ss_pred EeEEEEecc---hhhhHHHHccC----HHHHHHHHHH
Confidence 588899998 78999999554 5788888743
No 5
>1kkc_A Mnsod, manganese superoxide dismutase; homotetramer, oxidoreductase; 2.00A {Aspergillus fumigatus} SCOP: a.2.11.1 d.44.1.1
Probab=28.70 E-value=18 Score=27.72 Aligned_cols=29 Identities=28% Similarity=0.486 Sum_probs=23.8
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWE 102 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~ 102 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-
T Consensus 168 ~PLL~iDvW---EHAYYldY~N~----R~~Yv~a~w 196 (221)
T 1kkc_A 168 APVFGVDMW---EHAYYLQYLND----KASYAKGIW 196 (221)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHG
T ss_pred cceEEEecc---hhhhHHHHccC----HHHHHHHHH
Confidence 589999998 88999999664 577888873
No 6
>1ids_A Iron superoxide dismutase; 2.00A {Mycobacterium tuberculosis} SCOP: a.2.11.1 d.44.1.1 PDB: 1gn2_A 1gn3_A 1gn6_A 1gn4_A
Probab=28.65 E-value=15 Score=27.86 Aligned_cols=29 Identities=34% Similarity=0.564 Sum_probs=23.3
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWE 102 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~ 102 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-
T Consensus 154 ~PlL~iDvW---EHAYYldY~N~----R~~Yi~a~w 182 (207)
T 1ids_A 154 VPLLLLDMW---EHAFYLQYKNV----KVDFAKAFW 182 (207)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHGG
T ss_pred EeEEEEecc---hhhhHHHHCcC----HHHHHHHHH
Confidence 488899998 88999999655 467888773
No 7
>3js4_A Superoxide dismutase; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.95A {Anaplasma phagocytophilum}
Probab=28.05 E-value=18 Score=27.81 Aligned_cols=30 Identities=30% Similarity=0.649 Sum_probs=24.1
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++| .+|++.|-+
T Consensus 180 ~PLL~iDvW---EHAYYldY~N~R----~dYv~a~w~ 209 (227)
T 3js4_A 180 LPLATMDVW---EHAYYLDYLNLR----KKYIDVFLE 209 (227)
T ss_dssp EEEEEEECS---GGGTHHHHTTCH----HHHHHHHHH
T ss_pred eEEEEeecc---hhHhHHHHccCH----HHHHHHHHH
Confidence 688999999 789999997665 678777654
No 8
>3ak2_A Superoxide dismutase [MN/FE]; cambialistic, oxidoreductase; 1.35A {Aeropyrum pernix} PDB: 3ak1_A 3ak3_A 1p7g_A 3evk_A
Probab=28.02 E-value=19 Score=27.48 Aligned_cols=29 Identities=31% Similarity=0.695 Sum_probs=23.5
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWE 102 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~ 102 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-
T Consensus 159 ~PLL~iDvW---EHAYYldY~N~----R~~Yv~a~w 187 (214)
T 3ak2_A 159 VPILVIDVW---EHAYYLQYKND----RGSYVENWW 187 (214)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHG
T ss_pred EeEEEEEcc---hhhhHHHHccc----HHHHHHHHH
Confidence 588899999 88999999654 577888774
No 9
>3dc5_A Superoxide dismutase [MN] 2; alpha hairpin N domain, alpha/beta C domain, oxidoreductase, manganese, metal-binding, mitochondrion; 1.70A {Caenorhabditis elegans} PDB: 3dc6_A
Probab=27.53 E-value=19 Score=27.05 Aligned_cols=30 Identities=30% Similarity=0.536 Sum_probs=24.0
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++| .+|++.|-+
T Consensus 150 ~PlL~iDvW---EHAYYldY~N~R----~~Yi~~~w~ 179 (195)
T 3dc5_A 150 VPLFGIDVW---EHAYYLQYKNVR----PDYVHAIWK 179 (195)
T ss_dssp EEEEEEECS---GGGTHHHHTTCH----HHHHHHHGG
T ss_pred cceEEeech---HHHHHHHHccCH----HHHHHHHHH
Confidence 689999999 789999997665 678877643
No 10
>3tqj_A Superoxide dismutase [FE]; oxidoreductase; 2.00A {Coxiella burnetii}
Probab=27.41 E-value=19 Score=27.46 Aligned_cols=30 Identities=23% Similarity=0.359 Sum_probs=24.3
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++| .+|++.|-+
T Consensus 151 ~PlL~iDvW---EHAYYldY~N~R----~~Yv~a~w~ 180 (210)
T 3tqj_A 151 KPLMTCDVW---EHAYYIDTRNDR----PKYVNNFWQ 180 (210)
T ss_dssp EEEEEEECS---GGGTHHHHTTCH----HHHHHHHHH
T ss_pred eeeEEeecc---hHHHHHHHcccH----HHHHHHHHH
Confidence 689999999 889999997665 678887754
No 11
>2nyb_A Superoxide dismutase [FE]; iron superoxide dismutase Q69E, fesod, oxidoreductase; 1.10A {Escherichia coli} SCOP: a.2.11.1 d.44.1.1 PDB: 2bkb_A 1isa_A 1isb_A 1isc_A 1za5_A 2w7w_A
Probab=27.12 E-value=20 Score=26.84 Aligned_cols=30 Identities=27% Similarity=0.513 Sum_probs=24.0
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-+
T Consensus 150 ~PlL~iDvW---EHAYyldY~n~----R~~Yv~~~w~ 179 (192)
T 2nyb_A 150 TPLLTVDVW---EHAYYIDYRNA----RPGYLEHFWA 179 (192)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHHT
T ss_pred EeEEEEEcc---hhhhHHHHccC----HHHHHHHHHH
Confidence 588899998 78999999654 5788888743
No 12
>1unf_X Iron superoxide dismutase; oxidoreductase, eukaryotic, metalloprotein; 1.97A {Vigna unguiculata} SCOP: a.2.11.1 d.44.1.1
Probab=26.73 E-value=20 Score=27.62 Aligned_cols=30 Identities=23% Similarity=0.613 Sum_probs=24.0
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|=|-||=++ |..|++.|-+
T Consensus 189 ~PLL~iDvW---EHAYyldY~n~----R~~Yv~~~w~ 218 (238)
T 1unf_X 189 YPLLTIDVW---EHAYYLDFQNR----RPDYISVFMD 218 (238)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHHH
T ss_pred eeEEEEecc---hhhhHHHHCcC----HHHHHHHHHH
Confidence 588899998 88999999654 5678877754
No 13
>1xre_A SODA-2, superoxide dismutase; spine, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=26.70 E-value=20 Score=27.40 Aligned_cols=29 Identities=45% Similarity=0.850 Sum_probs=23.4
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWE 102 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~ 102 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-
T Consensus 168 ~PLL~iDvW---EHAYYldY~N~----R~~Yv~a~w 196 (217)
T 1xre_A 168 IPLLVIDVW---EHAYYLKYQNR----RPEFVTNWW 196 (217)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHG
T ss_pred EeEEEEEcc---hhHhHHHHccC----HHHHHHHHH
Confidence 588899998 78999999665 467888774
No 14
>2awp_A Iron super-oxide dismutase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.00A {Plasmodium knowlesi} PDB: 2bpi_A 2a03_A 2goj_A
Probab=26.66 E-value=16 Score=27.41 Aligned_cols=29 Identities=31% Similarity=0.638 Sum_probs=23.1
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWE 102 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~ 102 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-
T Consensus 152 ~PLL~iDvW---EHAYyldY~n~----R~~Yv~a~w 180 (198)
T 2awp_A 152 IPILTCDIW---EHAYYIDYRND----RPSYVKAWW 180 (198)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHT
T ss_pred ceEEEEecc---hhhhHHHHccC----HHHHHHHHH
Confidence 588899998 78999999554 577888773
No 15
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=26.47 E-value=99 Score=21.96 Aligned_cols=29 Identities=10% Similarity=0.108 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHHH
Q psy8045 7 IEIQAVLLRARFDKHKDENDLVKIRALLA 35 (115)
Q Consensus 7 ~R~~A~~lRarFe~Nk~v~Dp~~~~~Ll~ 35 (115)
+.......++.|..+++++|+..+..+++
T Consensus 115 ~~~~~alf~a~~~~~~~i~~~~~L~~~a~ 143 (226)
T 1r4w_A 115 EKVSRELWMRIWSRDEDITESQNILSAAE 143 (226)
T ss_dssp HHHHHHHHHHHHTSCCCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 55566677888999999999988877765
No 16
>3kky_A Mnsod, superoxide dismutase [MN]; manganese, ME binding, oxidoreductase, metal binding protein; 1.80A {Deinococcus radiodurans} PDB: 2cdy_A 2ce4_A 1y67_A 2aw9_A
Probab=26.41 E-value=18 Score=27.41 Aligned_cols=30 Identities=30% Similarity=0.571 Sum_probs=24.2
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=+ ++.+|++.|-+
T Consensus 167 ~PlL~iDvW---EHAYYldY~n----~R~~Yv~~~w~ 196 (211)
T 3kky_A 167 TPILGVDVW---EHAYYLNYQN----RRPDYLAAFWN 196 (211)
T ss_dssp EEEEEEECS---GGGTHHHHTT----CHHHHHHHHGG
T ss_pred cceEEeech---HHHhHHHHcc----cHHHHHHHHHH
Confidence 688999999 8899999975 45678887743
No 17
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=26.25 E-value=99 Score=21.53 Aligned_cols=30 Identities=10% Similarity=0.063 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHHHH
Q psy8045 7 IEIQAVLLRARFDKHKDENDLVKIRALLAE 36 (115)
Q Consensus 7 ~R~~A~~lRarFe~Nk~v~Dp~~~~~Ll~~ 36 (115)
+.......++-|..++++.|+..+..++++
T Consensus 105 ~~~~~~l~~a~~~~~~~~~~~~~l~~~a~~ 134 (208)
T 3kzq_A 105 EQMLEAIQHAYYLRAMPPHEEATHLQLAKE 134 (208)
T ss_dssp HHHHHHHHHHHHTSCCCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCHHHHHHHHHH
Confidence 445556678888899999999888777653
No 18
>4ffk_A Superoxide dismutase; oxidoreductase, superoxide acceptor; 1.76A {Acidilobus saccharovorans}
Probab=26.10 E-value=18 Score=27.83 Aligned_cols=30 Identities=30% Similarity=0.562 Sum_probs=24.1
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++| .+|++.|-+
T Consensus 172 ~PLL~iDvW---EHAYYLdY~N~R----~~Yi~a~w~ 201 (223)
T 4ffk_A 172 IPLLAVDVF---EHAYYIDYRNDR----AKYVDSWWD 201 (223)
T ss_dssp EEEEEEECS---GGGTHHHHTTCH----HHHHHHHGG
T ss_pred EEEEEEecc---hhHhHHHhccCH----HHHHHHHHH
Confidence 588999999 889999998654 678877643
No 19
>3rn4_A Superoxide dismutase [MN], mitochondrial; mitochondrial manganese superoxide dismutase, iron-binding, mitochondrion, oxidoreductase; 1.79A {Saccharomyces cerevisiae} PDB: 3bfr_A 3lsu_A* 4e4e_A*
Probab=25.85 E-value=21 Score=27.18 Aligned_cols=30 Identities=23% Similarity=0.512 Sum_probs=23.9
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++| .+|++.|-+
T Consensus 170 ~PlL~lDVW---EHAYYldY~N~R----~~Yi~a~w~ 199 (215)
T 3rn4_A 170 VPLVAIDAW---EHAYYLQYQNKK----ADYFKAIWN 199 (215)
T ss_dssp EEEEEEECS---GGGTHHHHTTCH----HHHHHHHGG
T ss_pred cceEeecch---HHHHHHHHccCH----HHHHHHHHH
Confidence 588899999 789999997655 678887743
No 20
>1mng_A Manganese superoxide dismutase; oxidoreductase(superoxide acceptor); 1.80A {Thermus thermophilus} SCOP: a.2.11.1 d.44.1.1 PDB: 3mds_A
Probab=25.07 E-value=23 Score=26.73 Aligned_cols=29 Identities=31% Similarity=0.496 Sum_probs=23.4
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWE 102 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~ 102 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-
T Consensus 160 ~PlL~iDvW---EHAYyldY~n~----R~~Yv~~~w 188 (203)
T 1mng_A 160 TPIVGIDVW---EHAYYLKYQNR----RADYLQAIW 188 (203)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHT
T ss_pred EeEEEEecc---hhhhHHHHCcC----HHHHHHHHH
Confidence 588899998 78999999655 477888873
No 21
>1dt0_A Superoxide dismutase; pseudomonas ovalis, oxidoreductase; 2.10A {Pseudomonas putida} SCOP: a.2.11.1 d.44.1.1
Probab=25.03 E-value=23 Score=26.64 Aligned_cols=28 Identities=25% Similarity=0.511 Sum_probs=23.2
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWW 101 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w 101 (115)
.|.-+||.| |-|-|-||=++ +..|++.|
T Consensus 150 ~PlL~iDvW---EHAYYldY~n~----R~~Yv~a~ 177 (197)
T 1dt0_A 150 TPLLTCDVW---EHAYYIDYRNL----RPKYVEAF 177 (197)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHH
T ss_pred EeEEEEEcc---hhhhHHHHccC----HHHHHHHH
Confidence 588899998 78999999654 57888887
No 22
>1ma1_A Superoxide dismutase; metal specificity, azide inhibition, peroxide inactivation, oxidoreductase; 2.60A {Methanothermobacterthermautotrophicus} SCOP: a.2.11.1 d.44.1.1
Probab=24.91 E-value=28 Score=26.24 Aligned_cols=29 Identities=28% Similarity=0.429 Sum_probs=23.4
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWE 102 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~ 102 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-
T Consensus 161 ~PlL~iDvW---EHAYyldY~n~----R~~Yv~~~w 189 (205)
T 1ma1_A 161 RILLVLDVW---EHAYYIDYRNV----RPDYVEAFW 189 (205)
T ss_dssp CCSEEEECS---GGGTHHHHTTC----HHHHHHHHT
T ss_pred EeEEEEecc---hhhhHHHHccC----HHHHHHHHH
Confidence 588899998 78999999654 577888774
No 23
>2gpc_A Iron superoxide dismutase; alpha+beta structure, oxidoreductase; 1.90A {Trypanosoma cruzi} PDB: 3esf_A
Probab=24.87 E-value=23 Score=26.51 Aligned_cols=30 Identities=23% Similarity=0.446 Sum_probs=24.3
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-+
T Consensus 154 ~PlL~iDvW---EHAYyldY~n~----R~~Yv~~~w~ 183 (194)
T 2gpc_A 154 KPLLTCDVW---EHAYYVDYKND----RAAYVQTFWN 183 (194)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHHH
T ss_pred eeEEEEEcc---HhhhHHHHCcC----HHHHHHHHHH
Confidence 588899998 78999999664 5788888754
No 24
>2rcv_A Superoxide dismutase [MN]; bacillus subtilis,superoxide dismutase, manganese, metal- binding, oxidoreductase, phosphorylation; 1.60A {Bacillus subtilis} PDB: 1xuq_A 1jr9_A
Probab=24.80 E-value=23 Score=26.62 Aligned_cols=29 Identities=31% Similarity=0.580 Sum_probs=23.4
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWE 102 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~ 102 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-
T Consensus 158 ~PlL~iDvW---EHAYyldY~n~----R~~Yv~~~w 186 (202)
T 2rcv_A 158 TPILGLDVW---EHAYYLNYQNR----RPDYISAFW 186 (202)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHT
T ss_pred EeEEEEecc---hhhhHHHHCcC----HHHHHHHHH
Confidence 588899998 78999999655 577888774
No 25
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=24.77 E-value=73 Score=22.38 Aligned_cols=30 Identities=13% Similarity=0.124 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHHHH
Q psy8045 7 IEIQAVLLRARFDKHKDENDLVKIRALLAE 36 (115)
Q Consensus 7 ~R~~A~~lRarFe~Nk~v~Dp~~~~~Ll~~ 36 (115)
+.......++-|..++++.|+..+..++++
T Consensus 109 ~~~~~alf~a~~~~g~~i~~~~~L~~~a~~ 138 (202)
T 3fz5_A 109 TAFAQRVFDLYFSDRLDTASPEAVSRLGPE 138 (202)
T ss_dssp HHHHHHHHHHHTTTCCCTTCHHHHHTTHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHHHH
Confidence 445556778889999999999888777664
No 26
>1my6_A Iron (III) superoxide dismutase; iron speroxide dismutase, thermophIle, reactive oxygen species, cyanobacteria, SOD, fesod; 1.60A {Thermosynechococcus elongatus} SCOP: a.2.11.1 d.44.1.1
Probab=24.62 E-value=23 Score=26.57 Aligned_cols=30 Identities=30% Similarity=0.668 Sum_probs=24.0
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-+
T Consensus 155 ~PlL~iDvW---EHAYyldY~n~----R~~Yv~~~w~ 184 (199)
T 1my6_A 155 VPLLTIDVW---EHAYYLDYQNR----RPDFIDNFLN 184 (199)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHHH
T ss_pred EeEEEEecc---hhhhHHHHCcC----HHHHHHHHHH
Confidence 588899998 78999999765 4678877754
No 27
>1bsm_A Superoxide dismutase; oxidoreductase; 1.35A {Propionibacterium freudenreichii subspshermanii} SCOP: a.2.11.1 d.44.1.1 PDB: 1ar4_A 1ar5_A 1bs3_A 1avm_A 1bt8_A
Probab=24.02 E-value=24 Score=26.51 Aligned_cols=30 Identities=37% Similarity=0.667 Sum_probs=23.8
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-+
T Consensus 155 ~PlL~iDvW---EHAYyldY~n~----R~~Yv~a~w~ 184 (201)
T 1bsm_A 155 IPLLQLDMW---EHAFYLQYKNV----KGDYVKSWWN 184 (201)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHHT
T ss_pred EeEEEEecc---hhhhHHHHCcC----HHHHHHHHHH
Confidence 588899998 78999999655 5778888743
No 28
>1coj_A Protein (superoxide dismutase); oxidoreductase; 1.90A {Aquifex pyrophilus} SCOP: a.2.11.1 d.44.1.1
Probab=23.86 E-value=25 Score=26.66 Aligned_cols=30 Identities=33% Similarity=0.538 Sum_probs=24.2
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++| ..|++.|-+
T Consensus 157 ~PlL~iDvW---EHAYYldY~N~R----~~Yi~a~w~ 186 (212)
T 1coj_A 157 IPLIVIDTY---EHAYYVDYKNKR----PPYIDAFFK 186 (212)
T ss_dssp EEEEEEECS---GGGTHHHHTTCH----HHHHHHHHH
T ss_pred EeEEEEEcc---hhHhHHHHhccH----HHHHHHHHH
Confidence 488899998 789999998774 678887743
No 29
>3h1s_A Superoxide dismutase; SOBD, csgid, oxidoreductase, structura genomics; 1.90A {Francisella tularensis subsp}
Probab=23.85 E-value=25 Score=26.40 Aligned_cols=30 Identities=23% Similarity=0.428 Sum_probs=24.1
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++ +.+|++.|-+
T Consensus 153 ~PlL~iDvW---EHAYYldY~n~----R~~Yv~~~w~ 182 (195)
T 3h1s_A 153 KPLLTFDVW---EHAYYIDYRNA----RPKYVEALWD 182 (195)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHGG
T ss_pred eeeEEeecc---hHHHHHHHccc----HHHHHHHHHH
Confidence 688999999 78999999765 4678887743
No 30
>1pl4_A Superoxide dismutase [MN], mitochondrial; oxidoreductase; 1.47A {Homo sapiens} SCOP: a.2.11.1 d.44.1.1 PDB: 1n0j_A 1luv_A 1msd_A 2adq_B 1pm9_A 3c3t_A 1ap6_A 1ap5_A 1var_A 3c3s_A 1em1_A 1qnm_A 1zte_A 1luw_A 2gds_A 1zuq_A 2adp_A* 1zsp_A 1n0n_A 2p4k_A ...
Probab=23.69 E-value=25 Score=26.35 Aligned_cols=29 Identities=28% Similarity=0.454 Sum_probs=23.3
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWE 102 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~ 102 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-
T Consensus 153 ~PlL~iDvW---EHAYyldY~n~----R~~Yv~~~w 181 (198)
T 1pl4_A 153 IPLLGIDVW---EHAYFLQYKNV----RPDYLKAIW 181 (198)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHG
T ss_pred EeEEEEecc---cchhHHHhccC----HHHHHHHHH
Confidence 488899998 78999999664 577888874
No 31
>1ix9_A Mnsod, superoxide dismutase; manganese superoxide dismutase, Y174F mutant, hydrogen bond, reactivity, ultra-high resolution, oxidoreductase; 0.90A {Escherichia coli} SCOP: a.2.11.1 d.44.1.1 PDB: 1i0h_A 1ixb_A 1zlz_A 1d5n_A 1mmm_A 1vew_A 3k9s_A 3ot7_A 1en5_A 1en4_A 1i08_A 1en6_A
Probab=23.53 E-value=25 Score=26.47 Aligned_cols=30 Identities=23% Similarity=0.512 Sum_probs=24.2
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-+
T Consensus 161 ~PlL~iDvW---EHAYYldY~n~----R~~Yv~~~w~ 190 (205)
T 1ix9_A 161 FPIMGLDVW---EHAYFLKFQNR----RPDYIKEFWN 190 (205)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHHH
T ss_pred cceEEEEcc---hhHhHHHHccC----HHHHHHHHHH
Confidence 588899998 78999999664 5788888754
No 32
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=22.98 E-value=32 Score=21.41 Aligned_cols=23 Identities=22% Similarity=0.371 Sum_probs=18.2
Q ss_pred HHHHHHHHHhhcCCCCCCCcCCCCCCCccc
Q psy8045 32 ALLAEGEKELFDTTHPSPIKFPTSPGGVAY 61 (115)
Q Consensus 32 ~Ll~~gE~el~~~~HPdPyi~P~~PGGtky 61 (115)
..|..+-+.|....|||- |||.|
T Consensus 22 ~~Ik~~yr~Lm~~nhPDk-------GGS~y 44 (65)
T 2guz_B 22 DKINNRFNYLFEVNDKEK-------GGSFY 44 (65)
T ss_dssp HHHHHHHHHHHHHTCGGG-------TCCHH
T ss_pred HHHHHHHHHHHHHhCCCC-------CCCHH
Confidence 456677788999999996 88865
No 33
>1b06_A Protein (superoxide dismutase); oxidoreductase; 2.20A {Sulfolobus acidocaldarius} SCOP: a.2.11.1 d.44.1.1 PDB: 1wb8_A* 1wb7_A
Probab=22.65 E-value=29 Score=26.30 Aligned_cols=29 Identities=24% Similarity=0.452 Sum_probs=23.5
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWE 102 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~ 102 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-
T Consensus 164 ~PlL~iDvW---EHAYyldY~n~----R~~Yv~a~w 192 (210)
T 1b06_A 164 PVILIVDEF---EHAYYLQYKNK----RGDYLNAWW 192 (210)
T ss_dssp CEEEEEECS---GGGTHHHHTTC----HHHHHHHHG
T ss_pred EEEEEEEcc---hhhhHHHHccC----HHHHHHHHH
Confidence 588899998 78999999654 578888874
No 34
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=22.35 E-value=1.3e+02 Score=22.05 Aligned_cols=30 Identities=10% Similarity=0.152 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHhcCCCCCC-HHHHHHHHHH
Q psy8045 7 IEIQAVLLRARFDKHKDEND-LVKIRALLAE 36 (115)
Q Consensus 7 ~R~~A~~lRarFe~Nk~v~D-p~~~~~Ll~~ 36 (115)
+.......++-|..+++++| +..+..++++
T Consensus 117 ~~~~~alf~a~~~~g~~i~d~~~~L~~~a~~ 147 (239)
T 3gl5_A 117 EALLDAFYRGNFADERSVFNDDERLVELAVG 147 (239)
T ss_dssp HHHHHHHHHHHHTCSSCCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 45556678899999999999 9888777664
No 35
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=21.76 E-value=1.3e+02 Score=21.77 Aligned_cols=27 Identities=15% Similarity=0.131 Sum_probs=22.0
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHH
Q psy8045 10 QAVLLRARFDKHKDENDLVKIRALLAE 36 (115)
Q Consensus 10 ~A~~lRarFe~Nk~v~Dp~~~~~Ll~~ 36 (115)
.....++-|..++++.|+..+..++++
T Consensus 118 ~~al~~A~~~~g~di~d~~~L~~~a~~ 144 (234)
T 3rpp_A 118 SRELWMRVWSRNEDITEPQSILAAAEK 144 (234)
T ss_dssp HHHHHHHHHTSCCCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 345677888999999999998888775
No 36
>4f2n_A Superoxide dismutase; ssgcid, NIH, niaid, SBRI, emerald biostructures, structural national institute of allergy and infectious diseases; 1.85A {Leishmania major}
Probab=21.58 E-value=29 Score=26.81 Aligned_cols=30 Identities=27% Similarity=0.531 Sum_probs=24.3
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++ +.+|++.|-+
T Consensus 185 ~PLL~iDvW---EHAYYLdY~N~----R~~Yv~a~w~ 214 (230)
T 4f2n_A 185 RPIFTADVW---EHAYYKDFENR----RADYLKELWQ 214 (230)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHGG
T ss_pred EeEEEEecc---hhHhHHHHccC----HHHHHHHHHh
Confidence 489999999 88999999765 5678887743
No 37
>3lio_A Iron superoxide dismutase; cold adaptation, flexibility, thermal stability, psychrophilic protein, metal-binding, oxidoreduc; HET: TRE; 1.50A {Pseudoalteromonas haloplanktis} PDB: 3lj9_A* 3ljf_A* 3sdp_A
Probab=21.49 E-value=29 Score=25.92 Aligned_cols=30 Identities=27% Similarity=0.523 Sum_probs=24.0
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++ +.+|++.|-+
T Consensus 151 ~PlL~iDvW---EHAYYldY~n~----R~~Yi~~~w~ 180 (192)
T 3lio_A 151 TPILTVDLW---EHAYYIDYRNV----RPDYLKGFWS 180 (192)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHHH
T ss_pred ceEEEeecc---hHHHHHHHccc----HHHHHHHHHH
Confidence 688899998 78999999655 4678887754
No 38
>3qvn_A Manganese-containing superoxide dismutase; Mn superoxide dismutase, oxidoreductase; 2.60A {Candida albicans}
Probab=21.33 E-value=23 Score=26.75 Aligned_cols=30 Identities=23% Similarity=0.452 Sum_probs=23.5
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++| ..|++.|-+
T Consensus 164 ~PlL~iDvW---EHAYYldY~N~R----~~Yi~a~w~ 193 (206)
T 3qvn_A 164 VPIIAIDAW---EHAYYLQYQNVK----LDYFKAIWN 193 (206)
T ss_dssp EEEEEEECS---HHHHHHHHTTCH----HHHHHHGGG
T ss_pred cceEEeech---HHHHHHHHccCH----HHHHHHHHh
Confidence 588899998 789999997655 678887643
No 39
>2cw3_A Pmsod2, iron superoxide dismutase; oxidoreductase; 2.50A {Perkinsus marinus}
Probab=20.80 E-value=30 Score=27.57 Aligned_cols=29 Identities=34% Similarity=0.756 Sum_probs=23.8
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWE 102 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~ 102 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-
T Consensus 235 ~PLL~iDVW---EHAYYLdY~N~----R~dYv~afw 263 (280)
T 2cw3_A 235 IPLFTCDVW---EHAYYLDYQHD----RAAYLTRWW 263 (280)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHH
T ss_pred EEEEEEEcc---hhhhHHHHccC----HHHHHHHHH
Confidence 588899998 78999999764 578888874
No 40
>1kn1_B Allophycocyanin; helix-turn-helix, electron transport; HET: CYC; 2.20A {Porphyra yezoensis} SCOP: a.1.1.3 PDB: 1all_B* 3dbj_B* 2v8a_B* 1b33_B* 2vjt_B*
Probab=20.74 E-value=60 Score=23.33 Aligned_cols=27 Identities=22% Similarity=0.274 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcCCCCCCCcccc
Q psy8045 30 IRALLAEGEKELFDTTHPSPIKFPTSPGGVAYE 62 (115)
Q Consensus 30 ~~~Ll~~gE~el~~~~HPdPyi~P~~PGGtkye 62 (115)
+..|++++...++. + |+ -..|||..|.
T Consensus 48 a~~Iv~~A~~~l~~--~--P~--l~~pgg~~y~ 74 (161)
T 1kn1_B 48 AANIIKEAVAKSLL--Y--SD--ITRPGGNMYT 74 (161)
T ss_dssp HHHHHHHHHHHHTT--T--SG--GGSTTSTTCS
T ss_pred HHHHHHHHHHHHHh--C--CC--ccCCCCCCcc
Confidence 46788888888887 4 44 4688997664
No 41
>2cw2_A Superoxide dismutase 1; SOD, oxidoreductase; 1.86A {Perkinsus marinus}
Probab=20.72 E-value=31 Score=26.54 Aligned_cols=29 Identities=24% Similarity=0.500 Sum_probs=23.5
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWE 102 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~ 102 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-
T Consensus 181 ~PLL~iDvW---EHAYYldY~N~----R~~Yv~a~w 209 (226)
T 2cw2_A 181 TPLMNIDVW---EHAYYIDYRNA----RAQYVKNYW 209 (226)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHT
T ss_pred EeEEEEEcc---hhhhHHHHCcC----HHHHHHHHH
Confidence 588899998 78999999664 578888873
No 42
>3cei_A Superoxide dismutase; oxidoreductase; 2.40A {Helicobacter pylori}
Probab=20.62 E-value=31 Score=26.29 Aligned_cols=30 Identities=27% Similarity=0.448 Sum_probs=23.8
Q ss_pred CcccccccCCchhhhhCcHHHHHHHHHHHHHHHHHHH
Q psy8045 67 IPDWVLDYWHPLERAQYPEYFKRREERKKEFLVWWEK 103 (115)
Q Consensus 67 pP~~vlD~Whp~eka~yp~yF~~Re~~k~e~~~~w~k 103 (115)
.|.-+||.| |-|-|-||=++ +..|++.|-+
T Consensus 150 ~PLL~iDvW---EHAYYldY~N~----R~~Yv~a~w~ 179 (213)
T 3cei_A 150 VPLLVVDVW---EHAYYIDHKNA----RPVYLEKFYG 179 (213)
T ss_dssp EEEEEEECS---GGGTHHHHTTC----HHHHHHHHHH
T ss_pred EEEEEEEcc---hhhhHHHHccC----HHHHHHHHHH
Confidence 588899998 78999999664 5778888754
Done!