Query psy8046
Match_columns 214
No_of_seqs 192 out of 406
Neff 4.7
Searched_HMMs 13730
Date Fri Aug 16 17:03:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8046.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/8046hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jatb_ d.20.1.1 (B:) Ubiquiti 48.3 22 0.0016 25.7 6.4 36 12-47 33-68 (136)
2 d1fzya_ d.20.1.1 (A:) Ubiquiti 47.6 20 0.0015 25.8 6.1 37 12-48 27-63 (149)
3 d2e2ca_ d.20.1.1 (A:) Ubiquiti 42.3 23 0.0017 25.9 5.7 34 14-47 36-69 (156)
4 d2f4za1 d.20.1.1 (A:32-192) Hy 41.9 28 0.0021 25.6 6.2 36 13-48 40-75 (161)
5 d1pzva_ d.20.1.1 (A:) Ubiquiti 39.7 24 0.0017 25.7 5.4 37 11-47 25-61 (161)
6 d1zyma1 a.60.10.1 (A:22-144) E 38.7 21 0.0016 25.0 4.8 28 155-182 17-44 (123)
7 d1yrva1 d.20.1.1 (A:1-148) Ubi 37.1 36 0.0026 24.6 6.1 35 14-48 31-65 (148)
8 d2awfa1 d.20.1.1 (A:7-131) Ubi 36.9 36 0.0026 23.7 5.9 36 12-47 25-60 (125)
9 d1ayza_ d.20.1.1 (A:) Ubiquiti 34.0 46 0.0034 23.6 6.2 34 14-47 30-63 (153)
10 d2a4da1 d.20.1.1 (A:82-220) Ub 33.9 50 0.0036 23.6 6.4 36 12-47 34-69 (139)
11 d2bepa1 d.20.1.1 (A:1-154) Ubi 33.7 45 0.0033 24.0 6.1 35 13-47 33-67 (154)
12 d2ucza_ d.20.1.1 (A:) Ubiquiti 33.2 47 0.0034 24.0 6.2 36 12-47 29-64 (164)
13 d1zdna1 d.20.1.1 (A:6-156) Ubi 31.2 46 0.0033 24.0 5.8 34 14-47 33-66 (151)
14 d1yf9a1 d.20.1.1 (A:13-170) Ub 30.9 34 0.0024 25.1 5.0 36 13-48 22-57 (158)
15 d1z3da1 d.20.1.1 (A:2-150) Ubi 30.8 56 0.0041 23.2 6.2 34 14-47 30-63 (149)
16 d1e43a1 b.71.1.1 (A:394-483) B 29.0 5.8 0.00043 27.8 0.1 15 56-70 65-79 (90)
17 d1i7ka_ d.20.1.1 (A:) Ubiquiti 28.8 66 0.0048 22.9 6.3 35 13-47 27-61 (146)
18 d1j7db_ d.20.1.1 (B:) Ubiquiti 28.3 57 0.0041 23.2 5.9 34 14-47 29-62 (149)
19 d1ivsa1 a.2.7.3 (A:797-862) Va 27.6 37 0.0027 21.2 4.1 27 155-181 4-30 (66)
20 d2uyza1 d.20.1.1 (A:3-158) Ubi 27.1 64 0.0047 23.2 6.0 35 13-47 33-67 (156)
21 d2z5da1 d.20.1.1 (A:23-174) Ub 26.8 40 0.0029 24.2 4.7 34 15-48 27-60 (152)
22 d2d3na1 b.71.1.1 (A:399-485) B 26.7 6.8 0.00049 27.3 0.1 14 57-70 63-76 (87)
23 d1z2ua1 d.20.1.1 (A:1-147) Ubi 26.7 75 0.0055 22.2 6.2 35 13-47 27-61 (147)
24 d1jata_ d.20.1.1 (A:) Ubiquiti 26.6 74 0.0054 22.7 6.3 35 13-47 29-63 (152)
25 d2a7la1 d.20.1.1 (A:1-117) Ubi 26.1 91 0.0066 21.1 7.0 35 13-47 31-65 (117)
26 d2fo3a1 d.20.1.1 (A:9-117) Put 25.5 76 0.0055 21.4 5.9 34 14-47 25-58 (109)
27 d1jpdx2 d.54.1.1 (X:-2-113) L- 24.6 24 0.0018 23.5 2.9 19 35-53 9-27 (116)
28 d1ud2a1 b.71.1.1 (A:391-480) B 24.0 8.2 0.00059 27.0 0.1 14 57-70 66-79 (90)
29 d1yh2a1 d.20.1.1 (A:1-154) Ubi 23.5 76 0.0056 22.4 5.8 34 14-47 29-62 (154)
30 d1y8xa1 d.20.1.1 (A:27-183) Ub 21.7 76 0.0056 22.9 5.5 35 12-47 27-61 (157)
No 1
>d1jatb_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), mms2 [TaxId: 4932]}
Probab=48.30 E-value=22 Score=25.74 Aligned_cols=36 Identities=19% Similarity=0.234 Sum_probs=26.8
Q ss_pred CCCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 12 SDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 12 ~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
++...++|.+.+.|+.+..-..-+=++.+.+-+.|+
T Consensus 33 dd~~l~~W~~~i~Gp~~tpy~gg~f~~~i~fp~~YP 68 (136)
T d1jatb_ 33 DDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYP 68 (136)
T ss_dssp TCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTT
T ss_pred CCCceeEEEEEEECCCCChhhcCEEEEEEEecCCCC
Confidence 344689999999998765544445578888888886
No 2
>d1fzya_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]}
Probab=47.64 E-value=20 Score=25.78 Aligned_cols=37 Identities=16% Similarity=0.059 Sum_probs=29.0
Q ss_pred CCCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCCC
Q psy8046 12 SDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPV 48 (214)
Q Consensus 12 ~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 48 (214)
.++..+.|.+-+.|+.+..-..-+=++.+.+.+.|+.
T Consensus 27 ~~~~~~~w~~~I~gp~~t~y~gg~f~~~i~fp~~YP~ 63 (149)
T d1fzya_ 27 SESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPF 63 (149)
T ss_dssp CSSCSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCCchhEEEEEEEcCCCCCCCCCceeEEEEecCCccc
Confidence 3457899999999987655556666899999999873
No 3
>d2e2ca_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Clam (Spisula solidissima), E-2C [TaxId: 6584]}
Probab=42.26 E-value=23 Score=25.91 Aligned_cols=34 Identities=12% Similarity=0.280 Sum_probs=26.7
Q ss_pred CCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 14 GHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 14 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
+..+.|.+-+.|+.+..-..-+=++.+.+-+.|+
T Consensus 36 ~dl~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP 69 (156)
T d2e2ca_ 36 DNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYP 69 (156)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CcccEEEEEEEcCCccccCCCEEEEEEEecCCCC
Confidence 4678999999998776655556678888888886
No 4
>d2f4za1 d.20.1.1 (A:32-192) Hypothetical protein Tgtwinscan_2721, E2 domain {Toxoplasma gondii [TaxId: 5811]}
Probab=41.86 E-value=28 Score=25.59 Aligned_cols=36 Identities=17% Similarity=0.332 Sum_probs=26.6
Q ss_pred CCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCCC
Q psy8046 13 DGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPV 48 (214)
Q Consensus 13 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 48 (214)
+++...|.+.+.|+.+..-..=+=++.+.+.+.|+.
T Consensus 40 ~~nl~~W~~~I~Gp~~TpY~gg~f~~~i~fp~~YP~ 75 (161)
T d2f4za1 40 GGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPY 75 (161)
T ss_dssp TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CCccceeEEEEeCCCCCccCCCEEEEEEeccCCCCC
Confidence 357899999999986655444444788888888864
No 5
>d1pzva_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-19 kDa [TaxId: 6239]}
Probab=39.72 E-value=24 Score=25.73 Aligned_cols=37 Identities=16% Similarity=0.224 Sum_probs=27.4
Q ss_pred CCCCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 11 ESDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 11 ~~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
.+++..+.|.+-|.|+.+..-..-+=++.+.+.+.|+
T Consensus 25 ~~~~dl~~W~~~i~gp~~tpY~gg~f~~~i~fp~~YP 61 (161)
T d1pzva_ 25 VDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYP 61 (161)
T ss_dssp SSTTCTTEEEEEEECCTTSSCSSCEEEEEEECCTTGG
T ss_pred CCCCCceEEEEEEECCcchhhcCCEEEEEEeCCCCCC
Confidence 3444678999999987665555556778888888886
No 6
>d1zyma1 a.60.10.1 (A:22-144) Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain {Escherichia coli [TaxId: 562]}
Probab=38.67 E-value=21 Score=24.97 Aligned_cols=28 Identities=7% Similarity=0.242 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8046 155 STLRGIIEAKKRLEREIGVYKDKISTKL 182 (214)
Q Consensus 155 ~el~~i~~a~~~v~~eI~~lk~~l~~~~ 182 (214)
.|+.|+..|..++..++..+++++....
T Consensus 17 ~E~~rl~~A~~~~~~~L~~l~~~~~~~~ 44 (123)
T d1zyma1 17 QEVERFLSGRAKASAQLETIKTKAGETF 44 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5899999999999999999999887643
No 7
>d1yrva1 d.20.1.1 (A:1-148) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 U [TaxId: 9606]}
Probab=37.09 E-value=36 Score=24.57 Aligned_cols=35 Identities=14% Similarity=0.282 Sum_probs=26.4
Q ss_pred CCeeeEEEEEecCCCcCcccceeeEEEEeCCCCCC
Q psy8046 14 GHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPV 48 (214)
Q Consensus 14 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 48 (214)
+..+.|.+-+.|+.+.....-+=++.+.+.++|+.
T Consensus 31 ~n~~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP~ 65 (148)
T d1yrva1 31 EDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNY 65 (148)
T ss_dssp TTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTT
T ss_pred CcccEEEEEEEeCCCCccCCCceEEEEEecccccc
Confidence 47889999999876655544455888888888873
No 8
>d2awfa1 d.20.1.1 (A:7-131) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 G1 [TaxId: 9606]}
Probab=36.90 E-value=36 Score=23.69 Aligned_cols=36 Identities=19% Similarity=0.280 Sum_probs=26.6
Q ss_pred CCCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 12 SDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 12 ~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
+++....|.+-|.|+.+..-..-+=++.+.+.+.|+
T Consensus 25 ~~~dl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP 60 (125)
T d2awfa1 25 DDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYP 60 (125)
T ss_dssp STTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CCCCceEEEEEEeCCCCcccCCCeeEEEEecCCCcC
Confidence 344578899999998766555556677788888876
No 9
>d1ayza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc2 (RAD6) [TaxId: 4932]}
Probab=34.02 E-value=46 Score=23.58 Aligned_cols=34 Identities=15% Similarity=0.271 Sum_probs=25.6
Q ss_pred CCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 14 GHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 14 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
+....|.+.+.|+.+..-..-+=++.+.+.+.|+
T Consensus 30 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP 63 (153)
T d1ayza_ 30 DNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYP 63 (153)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CcHHhHhheeeCCCCCccCCCEEEEEEecCcccc
Confidence 4688999999987665544445578888888876
No 10
>d2a4da1 d.20.1.1 (A:82-220) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 variant 1 [TaxId: 9606]}
Probab=33.87 E-value=50 Score=23.58 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=26.5
Q ss_pred CCCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 12 SDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 12 ~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
+++...+|.+.+.|+.+..-..=+=++.+.+-+.|+
T Consensus 34 ~d~nl~~W~~~I~Gp~~TpYegg~f~~~i~fp~~YP 69 (139)
T d2a4da1 34 EDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYP 69 (139)
T ss_dssp TCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CcccccEEEEEEECCCCCchhcCEEEEEEECCCCCC
Confidence 344688899999998766555555667777778876
No 11
>d2bepa1 d.20.1.1 (A:1-154) Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=33.73 E-value=45 Score=23.97 Aligned_cols=35 Identities=20% Similarity=0.173 Sum_probs=26.2
Q ss_pred CCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 13 DGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 13 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
+++...|.+-+.|+.+.....=+=++.+.+.+.|+
T Consensus 33 ~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP 67 (154)
T d2bepa1 33 DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYP 67 (154)
T ss_dssp SSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CCChhheEeeEecCccccccCCeeEEEEecccccc
Confidence 34677899999998665544445588888888887
No 12
>d2ucza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc7 [TaxId: 4932]}
Probab=33.21 E-value=47 Score=24.01 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=26.3
Q ss_pred CCCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 12 SDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 12 ~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
.++....|.|-|.|+.+..-..=+=++.+.+.+.|+
T Consensus 29 ~e~nl~~w~~~I~Gp~~tpy~gg~f~~~i~fp~~YP 64 (164)
T d2ucza_ 29 SENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYP 64 (164)
T ss_dssp SSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CccchhhhheeeeCCCcccccCCeeEEEEecCCCCC
Confidence 345678899999998765544555577777888886
No 13
>d1zdna1 d.20.1.1 (A:6-156) Ubiquitin conjugating enzyme, UBC {Human(Homo sapiens), E2 S [TaxId: 9606]}
Probab=31.25 E-value=46 Score=23.97 Aligned_cols=34 Identities=15% Similarity=0.169 Sum_probs=24.7
Q ss_pred CCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 14 GHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 14 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
+....|.+.+.|+.+..-..-+=++.+.+-+.|+
T Consensus 33 ~dl~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP 66 (151)
T d1zdna1 33 EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFP 66 (151)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred cchheeEEEEecCCCcCccCCceeeeeecCCCCC
Confidence 4578899999987665445555567777778876
No 14
>d1yf9a1 d.20.1.1 (A:13-170) Ubiquitin conjugating enzyme, UBC {Leishmania major [TaxId: 5664]}
Probab=30.86 E-value=34 Score=25.10 Aligned_cols=36 Identities=17% Similarity=0.114 Sum_probs=27.9
Q ss_pred CCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCCC
Q psy8046 13 DGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPV 48 (214)
Q Consensus 13 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 48 (214)
.+...+|.|-++|+.+..-..-+=++.+.+-+.|+.
T Consensus 22 ~d~~~~w~v~i~Gp~~TpY~gg~f~~~i~fp~~YP~ 57 (158)
T d1yf9a1 22 SDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPF 57 (158)
T ss_dssp CSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CCCceEEEEEEECCCCCCccCcEEEEEEECcccchh
Confidence 457889999999987766555555788888888873
No 15
>d1z3da1 d.20.1.1 (A:2-150) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-21.5 kDa [TaxId: 6239]}
Probab=30.84 E-value=56 Score=23.19 Aligned_cols=34 Identities=21% Similarity=0.336 Sum_probs=26.7
Q ss_pred CCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 14 GHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 14 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
+....|.+.+.|+.+..-..-+=++.+.+.+.|+
T Consensus 30 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP 63 (149)
T d1z3da1 30 DNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYP 63 (149)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CchhhhceeEECCCCccccCCEEEEEEEecCcCC
Confidence 4688999999988765555556688888999986
No 16
>d1e43a1 b.71.1.1 (A:394-483) Bacterial alpha-Amylase {Bacillus licheniformis [TaxId: 1402]}
Probab=28.96 E-value=5.8 Score=27.79 Aligned_cols=15 Identities=47% Similarity=1.121 Sum_probs=12.5
Q ss_pred CCcEEEEeeEeeEEE
Q psy8046 56 PPFEISETGWGEFEL 70 (214)
Q Consensus 56 PPFeVtE~GWGEF~I 70 (214)
.+=.|.|.|||+|.+
T Consensus 65 ~~V~id~~G~g~F~v 79 (90)
T d1e43a1 65 EPVVINSEGWGEFHV 79 (90)
T ss_dssp CCEECCTTSEEEEEE
T ss_pred CEEEECCCceEEEEE
Confidence 356788999999987
No 17
>d1i7ka_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch10 [TaxId: 9606]}
Probab=28.84 E-value=66 Score=22.91 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=25.3
Q ss_pred CCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 13 DGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 13 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
++..+.|.+-+.|+.+..-..-+=++.+.+.+.|+
T Consensus 27 ~~d~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP 61 (146)
T d1i7ka_ 27 SDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYP 61 (146)
T ss_dssp TTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTT
T ss_pred CCcccEEEEEEecCccccccCCEEEEEEEecCCCC
Confidence 35789999999987664444444577777888876
No 18
>d1j7db_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc13 [TaxId: 9606]}
Probab=28.30 E-value=57 Score=23.21 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=25.0
Q ss_pred CCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 14 GHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 14 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
+....|.+-|.|+.+..-..-+=++.+.+.+.|+
T Consensus 29 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP 62 (149)
T d1j7db_ 29 SNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYP 62 (149)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CcccEeeeEEECCcccccCCCEEEEEEecCCccc
Confidence 4677899999987655544444488888888886
No 19
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=27.64 E-value=37 Score=21.21 Aligned_cols=27 Identities=15% Similarity=-0.032 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy8046 155 STLRGIIEAKKRLEREIGVYKDKISTK 181 (214)
Q Consensus 155 ~el~~i~~a~~~v~~eI~~lk~~l~~~ 181 (214)
.|+.||..-..++.++|..+..+|...
T Consensus 4 ~E~~RL~K~l~kl~~~i~~~~~kL~N~ 30 (66)
T d1ivsa1 4 EWRRRQEKRLKELLALAERSQRKLASP 30 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCh
Confidence 588999999999999999999888754
No 20
>d2uyza1 d.20.1.1 (A:3-158) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc9 [TaxId: 9606]}
Probab=27.11 E-value=64 Score=23.24 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=25.0
Q ss_pred CCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 13 DGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 13 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
+.+..+|.+-+.|+.+..-..-+=++.+.+.+.|+
T Consensus 33 ~~n~~~W~~~i~gp~gtpY~gg~f~~~i~fp~~YP 67 (156)
T d2uyza1 33 TMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYP 67 (156)
T ss_dssp CEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CCcccEEEEEEEcCCCCCccCCEEEEEEeCCcccc
Confidence 34789999999997654433334477778888886
No 21
>d2z5da1 d.20.1.1 (A:23-174) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 H [TaxId: 9606]}
Probab=26.77 E-value=40 Score=24.24 Aligned_cols=34 Identities=21% Similarity=0.184 Sum_probs=25.1
Q ss_pred CeeeEEEEEecCCCcCcccceeeEEEEeCCCCCC
Q psy8046 15 HTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYPV 48 (214)
Q Consensus 15 ~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 48 (214)
..++|.|-+.|+.+..-..=+=++.+.+-+.|+.
T Consensus 27 ~l~~w~v~i~Gp~~TpY~gg~f~~~i~fp~~YP~ 60 (152)
T d2z5da1 27 GLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPF 60 (152)
T ss_dssp ETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred ChheEEEEEEcCCCCCcCCCEEEEEEEecCCCCC
Confidence 4578999999986655444455788888888863
No 22
>d2d3na1 b.71.1.1 (A:399-485) Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 1416]}
Probab=26.69 E-value=6.8 Score=27.29 Aligned_cols=14 Identities=36% Similarity=1.006 Sum_probs=11.6
Q ss_pred CcEEEEeeEeeEEE
Q psy8046 57 PFEISETGWGEFEL 70 (214)
Q Consensus 57 PFeVtE~GWGEF~I 70 (214)
+=.|.+.|||+|.+
T Consensus 63 ~V~id~~G~g~F~v 76 (87)
T d2d3na1 63 TVTINADGWGNFSV 76 (87)
T ss_dssp EEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 44677999999987
No 23
>d1z2ua1 d.20.1.1 (A:1-147) Ubiquitin conjugating enzyme, UBC {Caenorhabditis elegans, E2 2 [TaxId: 6239]}
Probab=26.68 E-value=75 Score=22.19 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=26.5
Q ss_pred CCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 13 DGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 13 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
+++...|.+.+.|+.+..-..-+=++.+.+-+.|+
T Consensus 27 ~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP 61 (147)
T d1z2ua1 27 GDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61 (147)
T ss_dssp TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CCchhhhhheecCCCCCCcCCCceEEEEecCcCCC
Confidence 34688999999998766655555578888888886
No 24
>d1jata_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc13 [TaxId: 4932]}
Probab=26.61 E-value=74 Score=22.72 Aligned_cols=35 Identities=20% Similarity=0.285 Sum_probs=27.4
Q ss_pred CCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 13 DGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 13 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
++....|.+-|.|+.+.....=+=++.+.+-+.|+
T Consensus 29 ~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP 63 (152)
T d1jata_ 29 DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYP 63 (152)
T ss_dssp TTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTT
T ss_pred CCccchhheeeeCCchhhhcCCEEEEEEecCccCC
Confidence 35788999999998766555556678888888886
No 25
>d2a7la1 d.20.1.1 (A:1-117) Ubiquitin-protein ligase W (E2 W) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.07 E-value=91 Score=21.08 Aligned_cols=35 Identities=17% Similarity=0.245 Sum_probs=24.4
Q ss_pred CCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 13 DGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 13 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
++...+|.|-+.|+.+..-..-+=++.+.+-+.|+
T Consensus 31 ~~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP 65 (117)
T d2a7la1 31 QNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 65 (117)
T ss_dssp CCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTT
T ss_pred CCCceEEEEEEeCCCCccccCCeeeEEEecCcccc
Confidence 34688999999998664444444467777777776
No 26
>d2fo3a1 d.20.1.1 (A:9-117) Putative ubiquitin-conjugating enzyme, E2 domain {Plasmodium chabaudi [TaxId: 5825]}
Probab=25.46 E-value=76 Score=21.42 Aligned_cols=34 Identities=18% Similarity=0.271 Sum_probs=21.5
Q ss_pred CCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 14 GHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 14 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
+..++|.+.+.|+.+..-..-+=++.+.+-+.|+
T Consensus 25 ~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP 58 (109)
T d2fo3a1 25 NNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYP 58 (109)
T ss_dssp TCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CcccEEEEEEecCchhhhcCCCceEEEEeccccC
Confidence 4678999999987654333334445555666665
No 27
>d1jpdx2 d.54.1.1 (X:-2-113) L-Ala-D/L-Glu epimerase {Escherichia coli [TaxId: 562]}
Probab=24.60 E-value=24 Score=23.52 Aligned_cols=19 Identities=11% Similarity=0.223 Sum_probs=8.0
Q ss_pred eeeEEEEeCCCCCCceeee
Q psy8046 35 IKKVSFKLHESYPVNVRIL 53 (214)
Q Consensus 35 IkKV~F~LHpSF~nP~Rvv 53 (214)
|..|.+-|+.+|.....+.
T Consensus 9 ~~~~~~pl~~pf~~s~g~~ 27 (116)
T d1jpdx2 9 VFEEAWPLHTPFVIARGSR 27 (116)
T ss_dssp EEEEEEEBSCC------CC
T ss_pred EEEEEEeccCCEECCCceE
Confidence 4566677776666544433
No 28
>d1ud2a1 b.71.1.1 (A:391-480) Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}
Probab=24.00 E-value=8.2 Score=27.01 Aligned_cols=14 Identities=43% Similarity=0.888 Sum_probs=11.5
Q ss_pred CcEEEEeeEeeEEE
Q psy8046 57 PFEISETGWGEFEL 70 (214)
Q Consensus 57 PFeVtE~GWGEF~I 70 (214)
+=.|.+.|||+|.+
T Consensus 66 ~V~id~~G~g~F~V 79 (90)
T d1ud2a1 66 SVTINGDGWGEFFT 79 (90)
T ss_dssp EEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 44677999999987
No 29
>d1yh2a1 d.20.1.1 (A:1-154) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 T [TaxId: 9606]}
Probab=23.50 E-value=76 Score=22.39 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=25.7
Q ss_pred CCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 14 GHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 14 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
+....|.+-+.|+.+..-..=+=++.+.+-+.|+
T Consensus 29 ~~~~~w~~~I~Gp~~TpY~gg~f~~~i~~p~~YP 62 (154)
T d1yh2a1 29 DQMDDLRAQILGGANTPYEKGVFKLEVIIPERYP 62 (154)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred cchhhhhceEeCCCCCCCCCCEEEEEEecCcccc
Confidence 4678999999998765555556677777888876
No 30
>d1y8xa1 d.20.1.1 (A:27-183) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 M [TaxId: 9606]}
Probab=21.75 E-value=76 Score=22.85 Aligned_cols=35 Identities=20% Similarity=0.149 Sum_probs=22.2
Q ss_pred CCCCeeeEEEEEecCCCcCcccceeeEEEEeCCCCC
Q psy8046 12 SDGHTHEWKVYIKPYYKEDLAKYIKKVSFKLHESYP 47 (214)
Q Consensus 12 ~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 47 (214)
+++..+.|.|.+ |+.+..-..-+=++.+.+.+.|+
T Consensus 27 ~~~~l~~w~~~i-~p~~t~Y~gg~f~~~i~fp~~YP 61 (157)
T d1y8xa1 27 DPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYP 61 (157)
T ss_dssp STTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTT
T ss_pred CCCcceEEEEEE-CCCCCCcCCCeEEEEEEecCCCC
Confidence 345788999988 54443334445556666677776
Done!