BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy8052
         (67 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q3UVL4|VPS51_MOUSE Vacuolar protein sorting-associated protein 51 homolog OS=Mus
           musculus GN=Vps51 PE=2 SV=2
          Length = 782

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/47 (59%), Positives = 39/47 (82%)

Query: 21  LEIERSIISQMLRKSVEAKDWLHGIEPRNVRAVMKRIIEELTLVDNQ 67
           ++++  +ISQMLRKSVE +DWL  +EPRNVRAVMKR++E+ T +D Q
Sbjct: 580 VKVQGLVISQMLRKSVETRDWLSTLEPRNVRAVMKRVVEDTTAIDVQ 626


>sp|Q9UID3|VPS51_HUMAN Vacuolar protein sorting-associated protein 51 homolog OS=Homo
           sapiens GN=VPS51 PE=1 SV=2
          Length = 782

 Score = 65.9 bits (159), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/47 (59%), Positives = 39/47 (82%)

Query: 21  LEIERSIISQMLRKSVEAKDWLHGIEPRNVRAVMKRIIEELTLVDNQ 67
           ++++  +ISQMLRKSVE +DWL  +EPRNVRAVMKR++E+ T +D Q
Sbjct: 580 VKVQGLVISQMLRKSVETRDWLSTLEPRNVRAVMKRVVEDTTAIDVQ 626


>sp|Q155U0|VPS51_DANRE Vacuolar protein sorting-associated protein 51 homolog OS=Danio
           rerio GN=vps51 PE=2 SV=1
          Length = 827

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/47 (61%), Positives = 40/47 (85%)

Query: 21  LEIERSIISQMLRKSVEAKDWLHGIEPRNVRAVMKRIIEELTLVDNQ 67
           ++++  IISQMLRKSVE +DW++ IEPRNVRAVMKR++E+ T +D Q
Sbjct: 625 VKVQGLIISQMLRKSVETRDWVNTIEPRNVRAVMKRVVEDTTSIDVQ 671


>sp|Q5ZJ25|VPS51_CHICK Vacuolar protein sorting-associated protein 51 homolog OS=Gallus
           gallus GN=VPS51 PE=2 SV=1
          Length = 787

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/47 (55%), Positives = 40/47 (85%)

Query: 21  LEIERSIISQMLRKSVEAKDWLHGIEPRNVRAVMKRIIEELTLVDNQ 67
           ++++ + ++QMLRKSVE +DWL  +EPRNVRAVMKR++E++T +D Q
Sbjct: 585 VQVQGAAVAQMLRKSVETRDWLGTVEPRNVRAVMKRVVEDITAIDVQ 631


>sp|Q505L3|VPS51_XENLA Vacuolar protein sorting-associated protein 51 homolog OS=Xenopus
           laevis GN=vps51 PE=2 SV=1
          Length = 757

 Score = 65.5 bits (158), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/66 (51%), Positives = 47/66 (71%)

Query: 2   VTSLSLLFGSSPDFLGVVVLEIERSIISQMLRKSVEAKDWLHGIEPRNVRAVMKRIIEEL 61
           V+SL  L  S+   L    ++ +  ++SQMLRKSVE +DW+  IEPRNVRAVMKR++E++
Sbjct: 536 VSSLCSLARSTAQTLLNQFVKYQGLVVSQMLRKSVETRDWVTTIEPRNVRAVMKRVVEDI 595

Query: 62  TLVDNQ 67
           T VD Q
Sbjct: 596 TGVDVQ 601


>sp|A6QQ47|VPS51_BOVIN Vacuolar protein sorting-associated protein 51 homolog OS=Bos
           taurus GN=VPS51 PE=2 SV=1
          Length = 781

 Score = 65.5 bits (158), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/47 (59%), Positives = 39/47 (82%)

Query: 21  LEIERSIISQMLRKSVEAKDWLHGIEPRNVRAVMKRIIEELTLVDNQ 67
           ++++  +ISQMLRKSVE +DWL  +EPRNVRAVMKR++E+ T +D Q
Sbjct: 579 VKVQGLVISQMLRKSVETRDWLSTLEPRNVRAVMKRVVEDTTAIDVQ 625


>sp|Q4V9Y0|VPS51_XENTR Vacuolar protein sorting-associated protein 51 homolog OS=Xenopus
           tropicalis GN=vps51 PE=2 SV=1
          Length = 760

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/66 (51%), Positives = 47/66 (71%)

Query: 2   VTSLSLLFGSSPDFLGVVVLEIERSIISQMLRKSVEAKDWLHGIEPRNVRAVMKRIIEEL 61
           V+SL  L  S+   L    ++ +  ++SQMLRKSVE +DW+  IEPRNVRAVMKR++E++
Sbjct: 539 VSSLCSLARSTAQTLLNQYVKSQGLVVSQMLRKSVETRDWVTTIEPRNVRAVMKRVVEDI 598

Query: 62  TLVDNQ 67
           T VD Q
Sbjct: 599 TGVDVQ 604


>sp|Q8MSY4|VPS51_DROME Vacuolar protein sorting-associated protein 51 homolog
           OS=Drosophila melanogaster GN=CG15087 PE=2 SV=1
          Length = 740

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/34 (76%), Positives = 32/34 (94%)

Query: 28  ISQMLRKSVEAKDWLHGIEPRNVRAVMKRIIEEL 61
           ISQMLRKSVE +DWL+ +EPR+VRAVMKR++EEL
Sbjct: 537 ISQMLRKSVETRDWLNCLEPRSVRAVMKRVVEEL 570


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.137    0.373 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,525,381
Number of Sequences: 539616
Number of extensions: 531049
Number of successful extensions: 1644
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1635
Number of HSP's gapped (non-prelim): 10
length of query: 67
length of database: 191,569,459
effective HSP length: 39
effective length of query: 28
effective length of database: 170,524,435
effective search space: 4774684180
effective search space used: 4774684180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)