BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8053
(492 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 296 bits (759), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/446 (39%), Positives = 250/446 (56%), Gaps = 70/446 (15%)
Query: 105 VTTILRTNEFSLEI-----ENHTSVKSYDSNQLPSNKPIEDTRCEAKCLLTTGVLLGVFD 159
V +IL+ NE+S ++ +N +SV +DSNQLP+N PIED R A CL T G+LLGVFD
Sbjct: 14 VNSILKANEYSFKVPEFDGKNVSSVLGFDSNQLPANAPIEDRRSAATCLQTRGMLLGVFD 73
Query: 160 GHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQE---PI-QLVESYNDKFDIVG 215
GH G AC+Q +S+RLF YIA +LLP + + + +ES PI Q + ND F
Sbjct: 74 GHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFS--K 131
Query: 216 ELKQLYLNXXXXXXXXXXXXXXXXXXXM--KHMLVNAFLSLDQHISQEAQLKQGGNHLNM 273
E +LY N + K L+NAF LD IS EAQ+ + LN
Sbjct: 132 EASKLYFNSLRTYWQELIDLNTGESTDIDVKEALINAFKRLDNDISLEAQVGDPNSFLNY 191
Query: 274 KTL-----------------------------------------------GHNTDNVREV 286
L HN N REV
Sbjct: 192 LVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREV 251
Query: 287 ERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVGEQ------ 340
ER+ EHPKNE +V++ +RLLG L P RAFGDV++KWS +L QK V+ +Q
Sbjct: 252 ERLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDL-QKRVIESGPDQLNDNEY 310
Query: 341 --ALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMSGKV 398
+ PNY+TPPYLTA+P+V ++RL P+D+FL+LATDGLW+ + VR+VGE+++G
Sbjct: 311 TKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMH 370
Query: 399 TLRPLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEYG-IEHSKIA 457
+P+ + + L +++ LL R+ +S D NAATHL+RHA+G E+G ++H +++
Sbjct: 371 HQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLS 430
Query: 458 QLLSMPQEVVRLFRDDITITVVYFDS 483
++LS+P+E+ R++RDDITI VV F+S
Sbjct: 431 KMLSLPEELARMYRDDITIIVVQFNS 456
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 63/86 (73%)
Query: 20 GAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHP 79
GA CVAH+DG LHVANTGD +A++GV +D +W A +S +HN N REVER+ EHP
Sbjct: 200 GATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREVERLKLEHP 259
Query: 80 KNERDTVIRMERLLGQLAPLRAFGDV 105
KNE +V++ +RLLG L P RAFGDV
Sbjct: 260 KNEAKSVVKQDRLLGLLMPFRAFGDV 285
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 287 bits (735), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 171/446 (38%), Positives = 248/446 (55%), Gaps = 70/446 (15%)
Query: 105 VTTILRTNEFSLEI-----ENHTSVKSYDSNQLPSNKPIEDTRCEAKCLLTTGVLLGVFD 159
V +IL+ NE+S ++ +N +S+ +DSN+LP+N PIED R CL T G+LLGVFD
Sbjct: 14 VNSILKANEYSFKVPEFDGKNVSSILGFDSNRLPANAPIEDRRSATTCLQTRGMLLGVFD 73
Query: 160 GHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQE---PI-QLVESYNDKFDIVG 215
GH G AC+Q +S+RLF YIA +LLP + + + +ES PI Q + ND F
Sbjct: 74 GHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFS--K 131
Query: 216 ELKQLYLNXXXXXXXXXXXXXXXXXXXM--KHMLVNAFLSLDQHISQEAQLKQGGNHLNM 273
E +LY N + K L+NAF LD IS EAQ+ + LN
Sbjct: 132 EASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNY 191
Query: 274 KTL-----------------------------------------------GHNTDNVREV 286
L HN N RE+
Sbjct: 192 LVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREL 251
Query: 287 ERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVVPHVGEQ------ 340
+R+ EHPKNE +V++ +RLLG L P RAFGDV++KWS +L QK V+ +Q
Sbjct: 252 QRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDL-QKRVIESGPDQLNDNEY 310
Query: 341 --ALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGEHMSGKV 398
+ PNY TPPYLTA+P+V ++RL P+D+FL+LATDGLW+ + VR+VGE+++G
Sbjct: 311 TKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMH 370
Query: 399 TLRPLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHALGGTEYG-IEHSKIA 457
+P+ + + L +++ LL R+ +S D NAATHL+RHA+G E+G ++H +++
Sbjct: 371 HQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLS 430
Query: 458 QLLSMPQEVVRLFRDDITITVVYFDS 483
++LS+P+E+ R++RDDITI VV F+S
Sbjct: 431 KMLSLPEELARMYRDDITIIVVQFNS 456
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%)
Query: 20 GAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHP 79
GA CVAH+DG LHVANTGD +A++GV +D +W A +S +HN N RE++R+ EHP
Sbjct: 200 GATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHP 259
Query: 80 KNERDTVIRMERLLGQLAPLRAFGDV 105
KNE +V++ +RLLG L P RAFGDV
Sbjct: 260 KNEAKSVVKQDRLLGLLMPFRAFGDV 285
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 34/153 (22%)
Query: 268 GNHLNMKTLGHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKE 327
G L M + H ++ E +RI + D R+ G L RA GD YK +K
Sbjct: 160 GKALEM-SFDHKPEDTVEYQRIEKAGGRVTLDG-----RVNGGLNLSRAIGDHGYKMNKS 213
Query: 328 LLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAV 387
L + EQ ++A PD+ + P D F++LA DG+W+ ++ Q V
Sbjct: 214 LPAE-------EQ----------MISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVV 256
Query: 388 RLVGEHMSGKVTLRPLQLPRKHMKLSEINELLI 420
+ V E ++ + MKLS+I E L
Sbjct: 257 QFVQERIN-----------KPGMKLSKICEELF 278
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 18 DEGAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNE 77
D G VA + G L+VAN GD + V+ N A ++S +H ++ E +RI
Sbjct: 129 DSGCTAVVALLHGKDLYVANAGDSRCVVC-----RNGKALEMSFDHKPEDTVEYQRIEKA 183
Query: 78 HPKNERDTVIRMERLLGQLAPLRAFGD 104
+ D R+ G L RA GD
Sbjct: 184 GGRVTLDG-----RVNGGLNLSRAIGD 205
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 352 LTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLV 390
L+ QPDV R+TP+ R ILATDGLWD+ S QAV +
Sbjct: 243 LSNQPDVRVVRVTPQHRVXILATDGLWDVXSAAQAVEIA 281
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 45/241 (18%)
Query: 151 TGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEP--IQLVESYN 208
TG GV+DGHGG A RL +A + + I D L++ + E +Q + +
Sbjct: 64 TGHFFGVYDGHGGHKVADYCRDRLHFALAEEI---ERIKDELSKRNTGEGRQVQWDKVFT 120
Query: 209 DKF-----DIVGELKQLYLNXXXXXXXXXXXXXXXXXXXMKHMLVNAFLSLDQHISQEAQ 263
F +I G++ + + + ++ ++ + + A
Sbjct: 121 SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVA-LVCSSHIVVSNCGDSRAV 179
Query: 264 LKQGGNHLNMKTLGHNTDNVREVERILNEHPKNERDTVIRME--RLLGQLAPLRAFGDVR 321
L +G + + ++ H D E RI N K VI+ + R+ G LA R+ GD R
Sbjct: 180 LFRGKEAMPL-SVDHKPDREDEYARIENAGGK-----VIQWQGARVFGVLAMSRSIGD-R 232
Query: 322 YKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLL 381
Y L+ YV+P +P+V + D LILA+DGLWD++
Sbjct: 233 Y------LKPYVIP-------------------EPEVTFMPRSREDECLILASDGLWDVM 267
Query: 382 S 382
+
Sbjct: 268 N 268
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 20 GAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHP 79
G+ VA + H+ V+N GD +AV+ + A +SV+H D E RI N
Sbjct: 155 GSTAVVALVCSSHIVVSNCGDSRAVLFRGKE-----AMPLSVDHKPDREDEYARIENAGG 209
Query: 80 KNERDTVIRME--RLLGQLAPLRAFGD 104
K VI+ + R+ G LA R+ GD
Sbjct: 210 K-----VIQWQGARVFGVLAMSRSIGD 231
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 151 TGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEP--IQLVESYN 208
TG GV+DGHGG A RL +A + + I D L + + E +Q + +
Sbjct: 65 TGHFFGVYDGHGGHKVADYCRDRLHFALAEEI---ERIKDELCKRNTGEGRQVQWDKVFT 121
Query: 209 DKF-----DIVGELKQLYLNXXXXXXXXXXXXXXXXXXXMKHMLVNAFLSLDQHISQEAQ 263
F +I G++ + + + ++ ++ + + A
Sbjct: 122 SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVA-LVCSSHIVVSNCGDSRAV 180
Query: 264 LKQGGNHLNMKTLGHNTDNVREVERILNEHPKNERDTVIRME--RLLGQLAPLRAFGDVR 321
L +G + + ++ H D E RI N K VI+ + R+ G LA R+ GD R
Sbjct: 181 LFRGKEAMPL-SVDHKPDREDEYARIENAGGK-----VIQWQGARVFGVLAMSRSIGD-R 233
Query: 322 YKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLL 381
Y L+ YV+P +P+V + D LILA+DGLWD++
Sbjct: 234 Y------LKPYVIP-------------------EPEVTFMPRSREDECLILASDGLWDVM 268
Query: 382 S 382
+
Sbjct: 269 N 269
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 20 GAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHP 79
G+ VA + H+ V+N GD +AV+ + A +SV+H D E RI N
Sbjct: 156 GSTAVVALVCSSHIVVSNCGDSRAVLFRGKE-----AMPLSVDHKPDREDEYARIENAGG 210
Query: 80 KNERDTVIRME--RLLGQLAPLRAFGD 104
K VI+ + R+ G LA R+ GD
Sbjct: 211 K-----VIQWQGARVFGVLAMSRSIGD 232
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 151 TGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEP--IQLVESYN 208
TG GV+DGHGG A RL +A + + I D L + + E +Q + +
Sbjct: 67 TGHFFGVYDGHGGHKVADYCRDRLHFALAEEI---ERIKDELCKRNTGEGRQVQWDKVFT 123
Query: 209 DKF-----DIVGELKQLYLNXXXXXXXXXXXXXXXXXXXMKHMLVNAFLSLDQHISQEAQ 263
F +I G++ + + + ++ ++ + + A
Sbjct: 124 SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVA-LVCSSHIVVSNCGDSRAV 182
Query: 264 LKQGGNHLNMKTLGHNTDNVREVERILNEHPKNERDTVIRME--RLLGQLAPLRAFGDVR 321
L +G + + ++ H D E RI N K VI+ + R+ G LA R+ GD R
Sbjct: 183 LFRGKEAMPL-SVDHKPDREDEYARIENAGGK-----VIQWQGARVFGVLAMSRSIGD-R 235
Query: 322 YKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLL 381
Y L+ YV+P +P+V + D LILA+DGLWD++
Sbjct: 236 Y------LKPYVIP-------------------EPEVTFMPRSREDECLILASDGLWDVM 270
Query: 382 S 382
+
Sbjct: 271 N 271
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 20 GAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHP 79
G+ VA + H+ V+N GD +AV+ + A +SV+H D E RI N
Sbjct: 158 GSTAVVALVCSSHIVVSNCGDSRAVLFRGKE-----AMPLSVDHKPDREDEYARIENAGG 212
Query: 80 KNERDTVIRME--RLLGQLAPLRAFGD 104
K VI+ + R+ G LA R+ GD
Sbjct: 213 K-----VIQWQGARVFGVLAMSRSIGD 234
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 151 TGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEP--IQLVESYN 208
TG GV+DGHGG A RL +A + + I D L + + E +Q + +
Sbjct: 50 TGHFFGVYDGHGGHKVADYCRDRLHFALAEEI---ERIKDELCKRNTGEGRQVQWDKVFT 106
Query: 209 DKF-----DIVGELKQLYLNXXXXXXXXXXXXXXXXXXXMKHMLVNAFLSLDQHISQEAQ 263
F +I G++ + + + ++ ++ + + A
Sbjct: 107 SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVA-LVCSSHIVVSNCGDSRAV 165
Query: 264 LKQGGNHLNMKTLGHNTDNVREVERILNEHPKNERDTVIRME--RLLGQLAPLRAFGDVR 321
L +G + + ++ H D E RI N K VI+ + R+ G LA R+ GD R
Sbjct: 166 LFRGKEAMPL-SVDHKPDREDEYARIENAGGK-----VIQWQGARVFGVLAMSRSIGD-R 218
Query: 322 YKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLL 381
Y L+ YV+P +P+V + D LILA+DGLWD++
Sbjct: 219 Y------LKPYVIP-------------------EPEVTFMPRSREDECLILASDGLWDVM 253
Query: 382 S 382
+
Sbjct: 254 N 254
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 20 GAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHP 79
G+ VA + H+ V+N GD +AV+ + A +SV+H D E RI N
Sbjct: 141 GSTAVVALVCSSHIVVSNCGDSRAVLFRGKE-----AMPLSVDHKPDREDEYARIENAGG 195
Query: 80 KNERDTVIRME--RLLGQLAPLRAFGD 104
K VI+ + R+ G LA R+ GD
Sbjct: 196 K-----VIQWQGARVFGVLAMSRSIGD 217
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 151 TGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEP--IQLVESYN 208
TG GV+DGHGG A RL +A + + I D L + + E +Q + +
Sbjct: 74 TGHFFGVYDGHGGHKVADYCRDRLHFALAEEI---ERIKDELCKRNTGEGRQVQWDKVFT 130
Query: 209 DKF-----DIVGELKQLYLNXXXXXXXXXXXXXXXXXXXMKHMLVNAFLSLDQHISQEAQ 263
F +I G++ + + + ++ ++ + + A
Sbjct: 131 SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVA-LVCSSHIVVSNCGDSRAV 189
Query: 264 LKQGGNHLNMKTLGHNTDNVREVERILNEHPKNERDTVIRME--RLLGQLAPLRAFGDVR 321
L +G + + ++ H D E RI N K VI+ + R+ G LA R+ GD R
Sbjct: 190 LFRGKEAMPL-SVDHKPDREDEYARIENAGGK-----VIQWQGARVFGVLAMSRSIGD-R 242
Query: 322 YKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLL 381
Y L+ YV+P +P+V + D LILA+DGLWD++
Sbjct: 243 Y------LKPYVIP-------------------EPEVTFMPRSREDECLILASDGLWDVM 277
Query: 382 S 382
+
Sbjct: 278 N 278
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 20 GAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHP 79
G+ VA + H+ V+N GD +AV+ + A +SV+H D E RI N
Sbjct: 165 GSTAVVALVCSSHIVVSNCGDSRAVLFRGKE-----AMPLSVDHKPDREDEYARIENAGG 219
Query: 80 KNERDTVIRME--RLLGQLAPLRAFGD 104
K VI+ + R+ G LA R+ GD
Sbjct: 220 K-----VIQWQGARVFGVLAMSRSIGD 241
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 27/112 (24%)
Query: 273 MKTLGHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKY 332
T H N RE ERI N + ++R+ G LA RA GD YK
Sbjct: 166 FSTQDHKPCNPREKERIQNAGGS------VMIQRVNGSLAVSRALGDYDYK--------- 210
Query: 333 VVPHVG--EQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLS 382
V G EQ ++P +P+V D F+ILA DG+WD++S
Sbjct: 211 CVDGKGPTEQLVSP----------EPEVYEILRAEEDEFIILAXDGIWDVMS 252
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 151 TGVLLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQLISDCLARLESQEP--IQLVESYN 208
TG GV+DGHGG A RL +A + + I D L + + E +Q + +
Sbjct: 61 TGHFFGVYDGHGGHKVADYCRDRLHFALAEEI---ERIKDELCKRNTGEGRQVQWDKVFT 117
Query: 209 DKF-----DIVGELKQLYLNXXXXXXXXXXXXXXXXXXXMKHMLVNAFLSLDQHISQEAQ 263
F +I G++ + + + ++ ++ + + A
Sbjct: 118 SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVA-LVCSSHIVVSNCGDSRAV 176
Query: 264 LKQGGNHLNMKTLGHNTDNVREVERILNEHPKNERDTVIRME--RLLGQLAPLRAFGDVR 321
L +G + + ++ H D E RI N K VI+ + R+ G LA R+ GD R
Sbjct: 177 LFRGKEAMPL-SVDHKPDREDEYARIENAGGK-----VIQWQGARVFGVLAMSRSIGD-R 229
Query: 322 YKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLL 381
Y L+ YV+P +P+V + D LILA+DGLWD++
Sbjct: 230 Y------LKPYVIP-------------------EPEVTFMPRSREDECLILASDGLWDVM 264
Query: 382 S 382
+
Sbjct: 265 N 265
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 20 GAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHP 79
G+ VA + H+ V+N GD +AV+ + A +SV+H D E RI N
Sbjct: 152 GSTAVVALVCSSHIVVSNCGDSRAVLFRGKE-----AMPLSVDHKPDREDEYARIENAGG 206
Query: 80 KNERDTVIRME--RLLGQLAPLRAFGD 104
K VI+ + R+ G LA R+ GD
Sbjct: 207 K-----VIQWQGARVFGVLAMSRSIGD 228
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 68/172 (39%), Gaps = 43/172 (25%)
Query: 275 TLGHNTDNVREVERILNEHPKNERDTVIRME--RLLGQLAPLRAFGDVRYKWSKELLQKY 332
++ H D E RI K VIR R+ G LA R+ GD RY L+
Sbjct: 167 SVDHKPDRDDEAARIEAAGGK-----VIRWNGARVFGVLAMSRSIGD-RY------LKPS 214
Query: 333 VVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLVGE 392
V+P P+V R D LILA+DGLWD+++ + L +
Sbjct: 215 VIP-------------------DPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARK 255
Query: 393 HMSGKVTLRPLQLPRKHMKLSEINELLIARQEGLSLKPLDSNAATHLLRHAL 444
R L +K+ E LL A + G P +AA +L + AL
Sbjct: 256 --------RILLWHKKNAMAGE--ALLPAEKRGEGKDPAAMSAAEYLSKMAL 297
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 12/87 (13%)
Query: 20 GAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHP 79
G+ VA + H+ VAN GD +A VL +A +SV+H D E RI
Sbjct: 132 GSTSVVAVVFPTHIFVANCGDSRA---VLCRGKTPLA--LSVDHKPDRDDEAARIEAAGG 186
Query: 80 KNERDTVIRME--RLLGQLAPLRAFGD 104
K VIR R+ G LA R+ GD
Sbjct: 187 K-----VIRWNGARVFGVLAMSRSIGD 208
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 28/111 (25%)
Query: 275 TLGHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVV 334
T H N E ERI N + ++R+ G LA RA GD YK V
Sbjct: 161 TQDHKPSNPLEKERIQNA------GGSVMIQRVNGSLAVSRALGDFDYK---------CV 205
Query: 335 PHVG--EQALAPNYFTPPYLTAQPDVIHY-RLTPRDRFLILATDGLWDLLS 382
G EQ ++P +P+V R D+F+ILA DG+WD++
Sbjct: 206 HGKGPTEQLVSP----------EPEVHDIERSEEDDQFIILACDGIWDVMG 246
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 28/111 (25%)
Query: 275 TLGHNTDNVREVERILNEHPKNERDTVIRMERLLGQLAPLRAFGDVRYKWSKELLQKYVV 334
T H N E ERI N + ++R+ G LA RA GD YK V
Sbjct: 161 TQDHKPSNPLEKERIQNA------GGSVMIQRVNGSLAVSRALGDFDYK---------CV 205
Query: 335 PHVG--EQALAPNYFTPPYLTAQPDVIHY-RLTPRDRFLILATDGLWDLLS 382
G EQ ++P +P+V R D+F+ILA DG+WD++
Sbjct: 206 HGKGPTEQLVSP----------EPEVHDIERSEEDDQFIILACDGIWDVMG 246
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 32/162 (19%)
Query: 244 KHMLVNAFLSLDQHISQEAQLKQGG---------NHLNMKTLGHNTDNVREVERILN--- 291
K L N+FL +D I A G +H+ + G + + + L
Sbjct: 115 KKALFNSFLRVDSEIESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSV 174
Query: 292 EHPKNERDTVIRMERLLG---QLAPLRAFGDVRYKWSKELLQKYVVPHVGEQALAPNYFT 348
+H + D R+E G Q R FG + S +G++ L P+
Sbjct: 175 DHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRS-----------IGDRYLKPSIIP 223
Query: 349 PPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLV 390
P +TA + D LILA+DG+WD+++ +A +
Sbjct: 224 DPEVTA------VKRVKEDDCLILASDGVWDVMTDEEACEMA 259
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Query: 20 GAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHP 79
G+ VA + H+ VAN GD +AV+ A +SV+H D E RI
Sbjct: 138 GSTSVVAVVFPSHIFVANCGDSRAVLC-----RGKTALPLSVDHKPDREDEAARIEAAGG 192
Query: 80 KNERDTVIRME--RLLGQLAPLRAFGD 104
K VI+ R+ G LA R+ GD
Sbjct: 193 K-----VIQWNGARVFGVLAMSRSIGD 214
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 32/162 (19%)
Query: 244 KHMLVNAFLSLDQHISQEAQLKQGG---------NHLNMKTLGHNTDNVREVERILN--- 291
K L N+FL +D I A G +H+ + G + + + L
Sbjct: 103 KKALFNSFLRVDSEIESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSV 162
Query: 292 EHPKNERDTVIRMERLLG---QLAPLRAFGDVRYKWSKELLQKYVVPHVGEQALAPNYFT 348
+H + D R+E G Q R FG + S +G++ L P+
Sbjct: 163 DHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRS-----------IGDRYLKPSIIP 211
Query: 349 PPYLTAQPDVIHYRLTPRDRFLILATDGLWDLLSPLQAVRLV 390
P +TA + D LILA+DG+WD+++ +A +
Sbjct: 212 DPEVTA------VKRVKEDDCLILASDGVWDVMTDEEACEMA 247
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Query: 20 GAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHP 79
G+ VA + H+ VAN GD +AV+ A +SV+H D E RI
Sbjct: 126 GSTSVVAVVFPSHIFVANCGDSRAVLC-----RGKTALPLSVDHKPDREDEAARIEAAGG 180
Query: 80 KNERDTVIRME--RLLGQLAPLRAFGD 104
K VI+ R+ G LA R+ GD
Sbjct: 181 K-----VIQWNGARVFGVLAMSRSIGD 202
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 87/253 (34%), Gaps = 78/253 (30%)
Query: 154 LLGVFDGHGGAACAQVLSKRLFDYIAATLLPDQ-LISDCLARLESQEPIQLVESYNDKFD 212
GV+DGHGG+ A +R+ +A + ++ ++SD LE
Sbjct: 54 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWLEK--------------- 98
Query: 213 IVGELKQLYLNXXXXXXXXXXXXXXXXXXXMKHMLVNAFLSLDQHISQEAQLKQGG---- 268
K L N+FL +D I A G
Sbjct: 99 ------------------------------WKKALFNSFLRVDSEIESVAPETVGSTSVV 128
Query: 269 -----NHLNMKTLGHNTDNVREVERILN---EHPKNERDTVIRMERLLG---QLAPLRAF 317
+H+ + G + + + L +H + D R+E G Q R F
Sbjct: 129 AVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVF 188
Query: 318 GDVRYKWSKELLQKYVVPHVGEQALAPNYFTPPYLTAQPDVIHYRLTPRDRFLILATDGL 377
G + S +G++ L P+ P +TA + D LILA+DG+
Sbjct: 189 GVLAMSRS-----------IGDRYLKPSIIPDPEVTA------VKRVKEDDCLILASDGV 231
Query: 378 WDLLSPLQAVRLV 390
WD+++ +A +
Sbjct: 232 WDVMTDEEACEMA 244
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Query: 20 GAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERILNEHP 79
G+ VA + H+ VAN GD +AV+ A +SV+H D E RI
Sbjct: 123 GSTSVVAVVFPSHIFVANCGDSRAVLC-----RGKTALPLSVDHKPDREDEAARIEAAGG 177
Query: 80 KNERDTVIRME--RLLGQLAPLRAFGD 104
K VI+ R+ G LA R+ GD
Sbjct: 178 K-----VIQWNGARVFGVLAMSRSIGD 199
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 20 GAVCCVAHIDGPHLHVANTGDCQAVIGVLTDDNNWIAKKVSVEHNTDNVREVERIL 75
G+ +A I HL++ N G+C+A++ + + ++SV+HN N E R+
Sbjct: 154 GSSAVLALIHRSHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLF 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,852,794
Number of Sequences: 62578
Number of extensions: 558541
Number of successful extensions: 1310
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1250
Number of HSP's gapped (non-prelim): 60
length of query: 492
length of database: 14,973,337
effective HSP length: 103
effective length of query: 389
effective length of database: 8,527,803
effective search space: 3317315367
effective search space used: 3317315367
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)