Query psy8066
Match_columns 529
No_of_seqs 231 out of 1803
Neff 9.5
Searched_HMMs 46136
Date Fri Aug 16 17:30:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8066.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8066hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2067|consensus 100.0 4.7E-80 1E-84 579.0 35.5 450 60-525 21-471 (472)
2 KOG0960|consensus 100.0 7E-64 1.5E-68 469.5 38.3 430 61-513 31-463 (467)
3 COG0612 PqqL Predicted Zn-depe 100.0 4E-54 8.7E-59 446.7 41.8 414 62-504 15-436 (438)
4 TIGR02110 PQQ_syn_pqqF coenzym 100.0 3.5E-46 7.7E-51 394.4 41.7 331 66-432 2-345 (696)
5 PRK15101 protease3; Provisiona 100.0 9.9E-47 2.1E-51 427.8 40.1 410 58-499 38-462 (961)
6 COG1025 Ptr Secreted/periplasm 100.0 1.4E-38 3E-43 333.1 37.6 408 58-499 18-441 (937)
7 PTZ00432 falcilysin; Provision 100.0 2E-36 4.3E-41 340.2 39.2 403 63-492 91-565 (1119)
8 KOG2583|consensus 100.0 2.5E-34 5.3E-39 271.8 38.2 402 65-508 24-429 (429)
9 KOG0959|consensus 100.0 6.9E-35 1.5E-39 310.9 37.0 405 59-497 23-444 (974)
10 PRK15101 protease3; Provisiona 100.0 1.2E-34 2.5E-39 329.2 38.5 423 34-500 495-930 (961)
11 COG1026 Predicted Zn-dependent 100.0 2.4E-27 5.1E-32 250.0 29.6 402 68-499 26-458 (978)
12 KOG2019|consensus 99.9 7.5E-24 1.6E-28 212.1 27.5 403 69-500 59-497 (998)
13 COG1025 Ptr Secreted/periplasm 99.9 2.9E-21 6.3E-26 203.5 35.4 418 34-497 474-907 (937)
14 KOG0961|consensus 99.9 1.8E-21 4E-26 194.8 28.1 398 71-497 28-453 (1022)
15 PF00675 Peptidase_M16: Insuli 99.9 5.3E-23 1.2E-27 181.0 14.6 147 74-223 1-148 (149)
16 PF05193 Peptidase_M16_C: Pept 99.9 1.7E-21 3.7E-26 177.5 17.5 181 229-433 1-184 (184)
17 KOG0959|consensus 99.8 5.7E-18 1.2E-22 182.0 35.0 421 35-489 482-910 (974)
18 COG1026 Predicted Zn-dependent 99.8 2.4E-17 5.2E-22 174.9 30.7 397 65-500 528-959 (978)
19 PTZ00432 falcilysin; Provision 99.7 1.1E-15 2.4E-20 173.0 30.9 399 68-503 664-1107(1119)
20 KOG2019|consensus 99.7 9.6E-14 2.1E-18 140.3 27.9 394 65-500 562-986 (998)
21 KOG0961|consensus 99.1 3.6E-09 7.9E-14 107.6 19.4 402 81-516 559-1000(1022)
22 PF03410 Peptidase_M44: Protei 98.0 4.4E-05 9.6E-10 75.5 11.5 182 67-273 2-191 (590)
23 PHA03081 putative metalloprote 97.9 0.00022 4.7E-09 70.8 12.5 185 67-273 2-191 (595)
24 TIGR02110 PQQ_syn_pqqF coenzym 97.8 0.001 2.3E-08 72.0 18.7 166 318-500 20-195 (696)
25 COG0612 PqqL Predicted Zn-depe 97.8 0.00038 8.2E-09 72.6 15.1 177 320-513 39-221 (438)
26 PF08367 M16C_assoc: Peptidase 97.3 0.0091 2E-07 56.9 15.5 106 70-177 76-193 (248)
27 KOG0960|consensus 96.0 0.16 3.4E-06 50.1 13.3 176 72-256 258-450 (467)
28 PF00675 Peptidase_M16: Insuli 96.0 0.35 7.6E-06 41.9 14.6 125 318-458 11-137 (149)
29 KOG2067|consensus 93.9 0.67 1.5E-05 45.9 10.9 162 83-254 263-442 (472)
30 PF05193 Peptidase_M16_C: Pept 83.4 11 0.00024 33.0 9.9 108 72-185 67-184 (184)
31 PF09851 SHOCT: Short C-termin 72.9 4.3 9.3E-05 24.6 2.5 23 412-434 6-30 (31)
32 PF09186 DUF1949: Domain of un 64.1 44 0.00096 22.9 7.3 49 120-168 5-53 (56)
33 KOG1374|consensus 57.2 1E+02 0.0022 30.9 9.8 158 354-513 142-326 (448)
34 PF08367 M16C_assoc: Peptidase 51.6 2.2E+02 0.0047 26.9 12.1 113 318-439 90-208 (248)
35 COG5023 Tubulin [Cytoskeleton] 44.8 2.6E+02 0.0057 28.1 10.4 134 354-498 140-305 (443)
36 KOG2583|consensus 33.2 5.4E+02 0.012 26.2 14.1 162 319-498 43-209 (429)
37 cd04922 ACT_AKi-HSDH-ThrA_2 AC 26.3 1.7E+02 0.0038 20.4 4.9 46 124-169 19-65 (66)
38 PF13840 ACT_7: ACT domain ; P 25.7 1.9E+02 0.0041 20.8 4.9 40 125-166 26-65 (65)
39 COG1761 RPB11 DNA-directed RNA 24.9 1.5E+02 0.0033 23.6 4.4 53 364-418 31-88 (99)
40 cd04916 ACT_AKiii-YclM-BS_2 AC 24.2 2.1E+02 0.0045 20.0 5.0 46 125-170 20-66 (66)
41 PF06992 Phage_lambda_P: Repli 23.2 6.3E+02 0.014 23.7 11.1 88 401-488 34-135 (233)
42 cd04923 ACT_AK-LysC-DapG-like_ 23.0 2.2E+02 0.0047 19.5 4.8 44 124-168 18-61 (63)
43 CHL00051 rps12 ribosomal prote 22.5 1.9E+02 0.0041 23.9 4.6 44 57-100 45-91 (123)
44 cd04936 ACT_AKii-LysC-BS-like_ 22.5 2.3E+02 0.0049 19.4 4.8 44 124-168 18-61 (63)
45 TIGR02933 nifM_nitrog nitrogen 22.2 4.7E+02 0.01 24.8 8.3 65 420-487 51-115 (256)
46 PRK05986 cob(I)alamin adenolsy 21.3 1.2E+02 0.0026 27.5 3.7 35 230-266 133-168 (191)
47 cd04914 ACT_AKi-DapG-BS_1 ACT 21.2 2.7E+02 0.0059 20.0 5.0 49 124-173 17-65 (67)
48 cd04915 ACT_AK-Ectoine_2 ACT d 21.1 3E+02 0.0066 19.7 5.2 45 125-169 20-65 (66)
49 cd04919 ACT_AK-Hom3_2 ACT doma 20.8 2.6E+02 0.0057 19.5 4.9 46 124-169 19-65 (66)
50 cd08779 Death_PIDD Death Domai 20.4 4E+02 0.0087 20.4 6.1 78 402-486 4-85 (86)
51 PRK05163 rpsL 30S ribosomal pr 20.3 2.4E+02 0.0053 23.3 4.8 44 57-100 45-91 (124)
52 cd08814 DED_Caspase_10_repeat2 20.1 4E+02 0.0087 20.2 6.1 74 410-486 4-77 (79)
No 1
>KOG2067|consensus
Probab=100.00 E-value=4.7e-80 Score=578.99 Aligned_cols=450 Identities=57% Similarity=0.948 Sum_probs=430.6
Q ss_pred CCCCeEEEEcCCCCEEEEEecCCCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHhCCEeEE
Q psy8066 60 NDRNTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDC 139 (529)
Q Consensus 60 ~~~~~~~~~L~NGl~v~~~~~~~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~g~~~~~ 139 (529)
+..+++..+|+||++|..+++.++.+++++++++|+++|.....|++||+|+|+|++|.++++. ++...||.+|+.+.|
T Consensus 21 ~~~~~kvttL~NGlkvase~~pg~f~~vGlyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~-ei~~~LE~~GGn~~c 99 (472)
T KOG2067|consen 21 EPSNTKVTTLPNGLKVASENTPGQFCTVGLYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSK-EILAELEKLGGNCDC 99 (472)
T ss_pred ccccceeeecCCccEEeccCCCCCceEEEEEEecCccccCcCcccHHHHHHHHhhccccCCcHH-HHHHHHHHhCCcccc
Confidence 5567899999999999999999999999999999999999999999999999999999999776 999999999999999
Q ss_pred eeccceeEEEEEeCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhccCCCCCCCC
Q psy8066 140 LSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSEEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLP 219 (529)
Q Consensus 140 ~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~l~~~~~~~~~ 219 (529)
++++|.+.|.+++.+++++..+++|+|.+.+|.|++++++.+|..+..|++....+| +..+.+.+|.+.|.+++++.+
T Consensus 100 qsSRetm~Yaas~~~~~v~sm~~lLadtV~~P~~~d~ev~~~~~~v~~E~~el~~~P--e~lL~e~iH~Aay~~ntlg~p 177 (472)
T KOG2067|consen 100 QSSRETMMYAASADSDGVDSMVELLADTVLNPKFTDQEVEEARRAVKYEIEELWMRP--EPLLTEMIHSAAYSGNTLGLP 177 (472)
T ss_pred cccHhhhHHHHHhhhcccHHHHHHHHHHHhcccccHHHHHHHHHhhhheccccccCc--hhhHHHHHHHHHhccCccccc
Confidence 999999999999999999999999999999999999999999999999999998888 689999999999999999999
Q ss_pred CCCCccccCCCCHHHHHHHHHhhccCCCeEEEEecCCHHHHHHHHHhhhccCCCccccccccccCCCCCCCCCCCcccCC
Q psy8066 220 KLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIGVEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDTSSATYTGG 299 (529)
Q Consensus 220 ~~g~~~~l~~it~~~l~~f~~~~~~~~~~~l~i~G~~~~~l~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (529)
.+|+.+.+..|+.+.|.+|.+++|+|.+|+++.+|+++|++++.+++||+.+|.. . .++++.++++|+|+
T Consensus 178 l~cp~~~i~~I~~~~l~~yl~~~ytp~rmVlA~vGV~heelv~~~~~~~~~~~s~----~------~p~i~~~~aQYtGG 247 (472)
T KOG2067|consen 178 LLCPEENIDKINREVLEEYLKYFYTPERMVLAGVGVEHEELVEIAEKLLGDLPST----K------VPPIDESKAQYTGG 247 (472)
T ss_pred ccCChhhhhhhhHHHHHHHHHhcCChhheEeeecCCCHHHHHHHHHHHhccCCcc----C------CCCcccchhhcccc
Confidence 9999999999999999999999999999999999999999999999999996643 1 45677778999999
Q ss_pred eeEEecCCCCCCCCCCCCCceeEEEEecCCCCCCCCcHHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceEEE
Q psy8066 300 IVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDPDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSA 379 (529)
Q Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~vl~~iLg~~~~f~~~~~~~g~~srL~~~lR~~~gl~Y~v 379 (529)
...++++.+...+ .++.+||+++|.+++++++|++++.+|+.+||||++||||||||||+||||.++.++++|.|++
T Consensus 248 ~~~~~~d~~~~~~---g~EltHv~lg~Eg~~~~deD~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sc 324 (472)
T KOG2067|consen 248 ELKIDTDAPQVTG---GPELTHVVLGFEGCSWNDEDFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSC 324 (472)
T ss_pred ccccCCCCccccC---ccceeeeeEeeccCCCCChhHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHh
Confidence 9988887765442 2478999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCccceEEEEEEeCCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHhcC
Q psy8066 380 TAYNHAYADTGLFCIHASAPPSNVKNIVDVLVKELVTMAGPIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATG 459 (529)
Q Consensus 380 ~a~~~~~~~~g~~~i~~~~~~~~~~~~i~~i~~~l~~l~~~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 459 (529)
.|++..|.++|+|+|+.+++|+++.+++..+.+++-.+..+++++|++|||+++++.+.++.|+....++++++|++..|
T Consensus 325 tAfnhsy~DtGlfgi~~s~~P~~a~~aveli~~e~~~~~~~v~~~el~RAK~qlkS~LlMNLESR~V~~EDvGRQVL~~g 404 (472)
T KOG2067|consen 325 TAFNHSYSDTGLFGIYASAPPQAANDAVELIAKEMINMAGGVTQEELERAKTQLKSMLLMNLESRPVAFEDVGRQVLTTG 404 (472)
T ss_pred hhhhccccCCceeEEeccCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccccchhHHHHhHHHHhcc
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHhccCCHHHHHHHHHHhccCCCeEEEEcCCCCCCCHHHHHHHhh-cCCCCCCceeec
Q psy8066 460 HRKRPSTYIESIENVTEDDIRRVASRLLTSQPSVAARGELINFPSYEDIHSGIQ-NNGVLPRKGRIS 525 (529)
Q Consensus 460 ~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~vvG~~~~~p~~~~~~~~~~-~~~~~~~~~~~~ 525 (529)
.+..++++++.|+++|++||.++++++|..+++++..||.+.+|+++.|.++++ +||++.|+++||
T Consensus 405 ~rk~p~e~~~~Ie~lt~~DI~rva~kvlt~~p~va~~Gd~~~lpt~~~i~~~~~~~d~~l~r~~~lf 471 (472)
T KOG2067|consen 405 ERKPPDEFIKKIEQLTPSDISRVASKVLTGKPSVAAFGDGTGLPTYDHIGNAVSSGDGRLLRTYGLF 471 (472)
T ss_pred CcCCHHHHHHHHHhcCHHHHHHHHHHHhcCCceeccCCcccCCcchhhhhhhcccCcchhhhhhccc
Confidence 999999999999999999999999999999999999999999999999999999 999999999987
No 2
>KOG0960|consensus
Probab=100.00 E-value=7e-64 Score=469.47 Aligned_cols=430 Identities=33% Similarity=0.538 Sum_probs=392.4
Q ss_pred CCCeEEEEcCCCCEEEEEecCCCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHhCCEeEEe
Q psy8066 61 DRNTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCL 140 (529)
Q Consensus 61 ~~~~~~~~L~NGl~v~~~~~~~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~g~~~~~~ 140 (529)
.|+++..+|+||++|..++....++++++++++|+++|.+.+.|.+||+|||+|+||++. +...+..+++.+|+++|++
T Consensus 31 ~P~t~vttL~NGlrVaTE~~~a~TATVGVwidaGSR~EnekNNG~ahFLEhlaFKGT~~R-s~~alElEieniGahLNAy 109 (467)
T KOG0960|consen 31 VPETEVTTLPNGLRVATEHNSASTATVGVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNR-SQAALELEIENIGAHLNAY 109 (467)
T ss_pred CCcceEEEcCCCcEEEeccCCCcceEEEEEeccCccccccccccHHHHHHHHHhcCCCcc-hhHHHHHHHHHHHHHhccc
Confidence 466789999999999998887799999999999999999999999999999999999995 7789999999999999999
Q ss_pred eccceeEEEEEeCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhccCCCCCCCCC
Q psy8066 141 SSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSEEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPK 220 (529)
Q Consensus 141 t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~ 220 (529)
|+++.|.|++++.++++++++++|+|++.+..+.+.+++++|..+++|++....+- ...+++.+|...|.++|+++.+
T Consensus 110 tSReqT~yyakal~~dv~kavdiLaDIlqns~L~~s~IerER~vILrEmqevd~~~--~eVVfdhLHatafQgtPL~~ti 187 (467)
T KOG0960|consen 110 TSREQTVYYAKALSKDVPKAVDILADILQNSKLEESAIERERDVILREMQEVDKNH--QEVVFDHLHATAFQGTPLGRTI 187 (467)
T ss_pred ccccceeeehhhccccchHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhcCCcccccc
Confidence 99999999999999999999999999999999999999999999999999887754 6899999999999999999999
Q ss_pred CCCccccCCCCHHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCCCCCCCCCcccCC
Q psy8066 221 LCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDTSSATYTGG 299 (529)
Q Consensus 221 ~g~~~~l~~it~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (529)
.|+.++|++|+++||++|.+.||.+.+|+++.+| ++||++++++++||++++.. ..+. ......++.+.|.
T Consensus 188 lGp~enI~si~r~DL~~yi~thY~~~RmVlaaaGgV~He~lv~la~k~fg~~~~~-~~~~-------~~~~~~~~~Ftgs 259 (467)
T KOG0960|consen 188 LGPSENIKSISRADLKDYINTHYKASRMVLAAAGGVKHEELVKLAEKYFGDLSKL-QTGD-------KVPLVPPARFTGS 259 (467)
T ss_pred cChhhhhhhhhHHHHHHHHHhcccCccEEEEecCCcCHHHHHHHHHHHcCCCccc-ccCc-------CCCCCCCccccCc
Confidence 9999999999999999999999999999999999 99999999999999998742 1111 1112234668899
Q ss_pred eeEEecCCCCCCCCCCCCCceeEEEEecCCCCCCCCcHHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceEEE
Q psy8066 300 IVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDPDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSA 379 (529)
Q Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~vl~~iLg~~~~f~~~~~~~g~~srL~~~lR~~~gl~Y~v 379 (529)
++++..+. -+.++++++..|.+|.++|++++.|.+.|+|....+. |.|....|+|-+.+-+. +++.+.
T Consensus 260 EvR~rdd~---------lP~a~~AiAVEG~~w~~pD~~~l~van~iiG~wdr~~--g~g~~~~s~La~~~~~~-~l~~sf 327 (467)
T KOG0960|consen 260 EVRVRDDD---------LPLAHIAIAVEGVSWAHPDYFALMVANTIIGNWDRTE--GGGRNLSSRLAQKIQQD-QLCHSF 327 (467)
T ss_pred eeeecCCC---------CchhheeeeEecCCcCCccHHHHHHHHHHhhhhhccc--CCccCCccHHHHHHHHH-HHHHHH
Confidence 88876553 2459999999999999999999999999999865544 33556779999988776 799999
Q ss_pred eeeccccCccceEEEEEEe-CCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHhc
Q psy8066 380 TAYNHAYADTGLFCIHASA-PPSNVKNIVDVLVKELVTMAGPIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLAT 458 (529)
Q Consensus 380 ~a~~~~~~~~g~~~i~~~~-~~~~~~~~i~~i~~~l~~l~~~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 458 (529)
.+|...|.++|+|++|+.| ++..++..+..+++++.++...+|+.|+++||+.|+.++...++...-.+++++++++.+
T Consensus 328 qsFnt~YkDTGLwG~y~V~~~~~~iddl~~~vl~eW~rL~~~vteaEV~RAKn~Lkt~Lll~ldgttpi~ediGrqlL~~ 407 (467)
T KOG0960|consen 328 QSFNTSYKDTGLWGIYFVTDNLTMIDDLIHSVLKEWMRLATSVTEAEVERAKNQLKTNLLLSLDGTTPIAEDIGRQLLTY 407 (467)
T ss_pred hhhhcccccccceeEEEEecChhhHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHhhc
Confidence 9999999999999999999 888999999999999999988899999999999999999999999888999999999999
Q ss_pred CCCCChhHHHHHhccCCHHHHHHHHHHhcc-CCCeEEEEcCCCCCCCHHHHHHHhh
Q psy8066 459 GHRKRPSTYIESIENVTEDDIRRVASRLLT-SQPSVAARGELINFPSYEDIHSGIQ 513 (529)
Q Consensus 459 ~~~~~~~~~~~~i~~vT~edi~~~a~~~l~-~~~~~~vvG~~~~~p~~~~~~~~~~ 513 (529)
|+...+.++.+.|++||.+||+++|.+++- .+..++.+|+++.+|+++.|++.+.
T Consensus 408 Grri~l~El~~rId~vt~~~Vr~va~k~iyd~~iAia~vG~ie~lpdy~~irs~m~ 463 (467)
T KOG0960|consen 408 GRRIPLAELEARIDAVTAKDVREVASKYIYDKDIAIAAVGPIEGLPDYNRIRSGMS 463 (467)
T ss_pred CCcCChHHHHHHHhhccHHHHHHHHHHHhhcCCcceeeecccccCchHHHHhccch
Confidence 999999999999999999999999999975 4789999999999999999998764
No 3
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=4e-54 Score=446.71 Aligned_cols=414 Identities=29% Similarity=0.469 Sum_probs=359.2
Q ss_pred CCeEEEEcCCCCEEEEEecC-CCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHhCCEeEEe
Q psy8066 62 RNTQVTTLPNGLRVASENRF-GSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCL 140 (529)
Q Consensus 62 ~~~~~~~L~NGl~v~~~~~~-~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~g~~~~~~ 140 (529)
.+++..+|+||++++..+.+ .+.+++.+++++|+++|++.+.|+|||+|||+|+|+.++++ .++.+.++..|+..|++
T Consensus 15 ~~~~~~~L~nGl~~~~~~~~~~~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~-~~i~~~~~~~G~~~na~ 93 (438)
T COG0612 15 PGLQVFTLPNGLRVITYPNPTAPTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPS-AELAEAFEKLGGQLNAF 93 (438)
T ss_pred ccceEEEcCCCCEEEEEeCCCCCEEEEEEEEeecccCCCCCcccHHHHHHHHHccCCCCCCh-HHHHHHHHHhcCeeecc
Confidence 34799999999999987766 69999999999999999999999999999999999999865 48999999999999999
Q ss_pred eccceeEEEEEeCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhccCCCCCCCCC
Q psy8066 141 SSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSEEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPK 220 (529)
Q Consensus 141 t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~ 220 (529)
|+.|.|.|.+++.+++++++|++++|++.+|.|++++|+++|+.+++|+++..++| ...+.+.+...+|++|||++++
T Consensus 94 ts~d~t~y~~~~l~~~~~~~l~llad~l~~p~f~~~~~e~Ek~vil~ei~~~~d~p--~~~~~~~l~~~~~~~~p~~~~~ 171 (438)
T COG0612 94 TSFDYTVYYLSVLPDNLDKALDLLADILLNPTFDEEEVEREKGVILEEIRMRQDDP--DDLAFERLLEALYGNHPLGRPI 171 (438)
T ss_pred ccchhhhhhhhhchhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCc--hHHHHHHHHHHhhccCCCCCCC
Confidence 99999999999889999999999999999999999999999999999999999988 5899999999999999999999
Q ss_pred CCCccccCCCCHHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCCCCCCCCCcccCC
Q psy8066 221 LCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDTSSATYTGG 299 (529)
Q Consensus 221 ~g~~~~l~~it~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (529)
+|+.++|+++|+++|++||++||+|+||+|+|+| ++++++.++++++|++++.. .. +......+......
T Consensus 172 ~G~~e~I~~it~~dl~~f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~~~~~~---~~------~~~~~~~~~~~~~~ 242 (438)
T COG0612 172 LGTEESIEAITREDLKDFYQKWYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPGA---AP------PPKIPPEPPLGPER 242 (438)
T ss_pred CCCHHHHHhCCHHHHHHHHHHhcCcCceEEEEecCCCHHHHHHHHHHHHccCCcc---CC------CCCCCCccccCCCc
Confidence 9999999999999999999999999999999999 99999999999999996541 11 01111111111122
Q ss_pred eeEEecCCCCCCCCCCCCCceeEEEEecCCCCCCC-CcHHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceEE
Q psy8066 300 IVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDP-DFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFS 378 (529)
Q Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~-~~~~~~vl~~iLg~~~~f~~~~~~~g~~srL~~~lR~~~gl~Y~ 378 (529)
...+.... . +.-.++++.+++++++...+ +++++.+++.++|++ ++||||+++|+++|++|+
T Consensus 243 ~~~~~~~~-~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~llgg~-----------~~SrLf~~~re~~glay~ 305 (438)
T COG0612 243 VVRVNDPE-Q-----PDLEQAWLALGYPGPDYDSPDDYAALLLLNGLLGGG-----------FSSRLFQELREKRGLAYS 305 (438)
T ss_pred eEEecCCC-C-----chhhhhhhhccccCcCcCcchhhHHHHHHHHHhCCC-----------cchHHHHHHHHhcCceee
Confidence 22322110 0 11256888999998887666 788899999999976 239999999999999999
Q ss_pred EeeeccccCccceEEEEEEeCCCCHHHHHHHHHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHH
Q psy8066 379 ATAYNHAYADTGLFCIHASAPPSNVKNIVDVLVKELVTMAGP----IDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQ 454 (529)
Q Consensus 379 v~a~~~~~~~~g~~~i~~~~~~~~~~~~i~~i~~~l~~l~~~----it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~ 454 (529)
++++...+.+.|.+.+++.+.+++.+.+.+.+.+++..+... +|+++++++|..+.+.+....+++...++.+...
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~~~s~~~~~~~~~~~ 385 (438)
T COG0612 306 VSSFSDFLSDSGLFSIYAGTAPENPEKTAELVEEILKALKKGLKGPFTEEELDAAKQLLIGLLLLSLDSPSSIAELLGQY 385 (438)
T ss_pred eccccccccccCCceEEEEecCCChhhHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHH
Confidence 999888888899999999998887777777777777766542 8999999999999999999999999999999888
Q ss_pred HHhcCCCCChhHHHHHhccCCHHHHHHHHHHhccCC-CeEEEEcCCCCCCC
Q psy8066 455 VLATGHRKRPSTYIESIENVTEDDIRRVASRLLTSQ-PSVAARGELINFPS 504 (529)
Q Consensus 455 ~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~-~~~~vvG~~~~~p~ 504 (529)
...++.....+++.+.|++||.+||++++++++.++ .+++++|+.+..+.
T Consensus 386 ~~~~~~~~~~~~~~~~i~~vt~~dv~~~a~~~~~~~~~~~~~~~p~~~~~~ 436 (438)
T COG0612 386 LLLGGSLITLEELLERIEAVTLEDVNAVAKKLLAPENLTIVVLGPEKALKD 436 (438)
T ss_pred HHhcCCccCHHHHHHHHHhcCHHHHHHHHHHhcCCCCcEEEEEcccccccc
Confidence 776677789999999999999999999999999975 88999999887654
No 4
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=3.5e-46 Score=394.42 Aligned_cols=331 Identities=18% Similarity=0.201 Sum_probs=279.7
Q ss_pred EEEcCCCCEEEEEecC-CCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHhCCEeEEeeccc
Q psy8066 66 VTTLPNGLRVASENRF-GSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRD 144 (529)
Q Consensus 66 ~~~L~NGl~v~~~~~~-~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~g~~~~~~t~~~ 144 (529)
+++|+||++|++.+.+ .+.+++.++|++|+++|+.+..|++||+|||+|+||++++..+++.+.++.+|+++|++|+.|
T Consensus 2 ~~tL~NGLrVllv~~p~~p~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~lNA~Ts~d 81 (696)
T TIGR02110 2 RITLPNGLRVHLYHQPDAKRAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQVNATTLER 81 (696)
T ss_pred eEEcCCCCEEEEEECCCCCEEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCeEEEEEcCC
Confidence 5789999999986554 599999999999999999999999999999999999998654589999999999999999999
Q ss_pred eeEEEEEeCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhccCCCCCCCCCCCCc
Q psy8066 145 TFIYAASAATSGLDTVMKILGDVVLRPKFSEEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPP 224 (529)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~g~~ 224 (529)
+|.|++++++++++.+|+++.|++.+|.|++++++++|+.+++|++...++| ...+.+.+.+.+|++|||+++.+|+.
T Consensus 82 ~T~y~~~v~~~~l~~aL~lLaD~l~~P~f~eeeierEr~vvl~Ei~~~~ddp--~~~~~~~l~~~l~~~HPy~~~~iGt~ 159 (696)
T TIGR02110 82 TTAFFFELPAAALAAGLARLCDMLARPLLTAEDQQREREVLEAEYIAWQNDA--DTLREAALLDALQAGHPLRRFHAGSR 159 (696)
T ss_pred eEEEEEEecHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhcCH--HHHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999999999999888877 57888899999999999999999999
Q ss_pred cccCCCC---HHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCCCCCCCCCcccCCe
Q psy8066 225 ASIGVIN---NNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDTSSATYTGGI 300 (529)
Q Consensus 225 ~~l~~it---~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (529)
++|++++ .++|++||++||+|+||+++|+| +++++++++++++|+.+++..... +.. +.+.+.+..
T Consensus 160 esL~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~--------~~~--~~p~~~~~~ 229 (696)
T TIGR02110 160 DSLALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQSLDELEQLAARFGASLAAGGECA--------QAP--PAPLLRFDR 229 (696)
T ss_pred HHHhCcccchHHHHHHHHHHhcchhcEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCC--------CCC--CCCCCCCce
Confidence 9999876 99999999999999999999999 999999999999999865432110 011 011112222
Q ss_pred eEEecCCCCCCCCCCCCCceeEEEEecCCCCCCCCcHHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceEEEe
Q psy8066 301 VKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDPDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSAT 380 (529)
Q Consensus 301 ~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~vl~~iLg~~~~f~~~~~~~g~~srL~~~lR~~~gl~Y~v~ 380 (529)
..+.... .++.++.+++++++..+++ ++.+++.|||++.+ |+|+.+||+ +|++|+++
T Consensus 230 ~~~~~~~---------~~q~~l~~~~p~~~~~d~~--al~lL~~iLg~g~s-----------SrL~~~LRe-~GLaysV~ 286 (696)
T TIGR02110 230 LTLAGGS---------EPRLWLLFALAGLPATARD--NVTLLCEFLQDEAP-----------GGLLAQLRE-RGLAESVA 286 (696)
T ss_pred eEEEecC---------cceEEEEEeecCCCCCChH--HHHHHHHHhCCCcc-----------hHHHHHHHH-CCCEEEEE
Confidence 2222111 1457777777766554444 58999999997644 999999997 79999999
Q ss_pred eeccccCccc--eEEEEEEe---CCCCHHHHHHHHHHHHHHhc-C--CCCHHHHHHHHHH
Q psy8066 381 AYNHAYADTG--LFCIHASA---PPSNVKNIVDVLVKELVTMA-G--PIDADELSRAKKQ 432 (529)
Q Consensus 381 a~~~~~~~~g--~~~i~~~~---~~~~~~~~i~~i~~~l~~l~-~--~it~~el~~ak~~ 432 (529)
+++ .+.+.| .|.|++.+ .+++.+++++.|.++|++++ + +++.+|++++|+.
T Consensus 287 s~~-~~~~~g~~lf~I~~~lt~~~~~~~~~v~~~i~~~L~~L~~~~~~~~~eel~rlk~~ 345 (696)
T TIGR02110 287 ATW-LYQDAGQALLALEFSARCISAAAAQQIEQLLTQWLGALAEQTWAEQLEHYAQLAQR 345 (696)
T ss_pred Eec-cccCCCCcEEEEEEEEcCCCccCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Confidence 865 555555 89999887 34589999999999999995 4 5899999999876
No 5
>PRK15101 protease3; Provisional
Probab=100.00 E-value=9.9e-47 Score=427.83 Aligned_cols=410 Identities=13% Similarity=0.119 Sum_probs=329.5
Q ss_pred cCCCCCeEEEEcCCCCEEEEEec-CCCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHhCCE
Q psy8066 58 KDNDRNTQVTTLPNGLRVASENR-FGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGI 136 (529)
Q Consensus 58 ~~~~~~~~~~~L~NGl~v~~~~~-~~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~g~~ 136 (529)
..+.+.++.++|+||++|++.+. ..+.+.+.+.|++|+.+||.+..|+|||+|||+|.||.+|+..+++.++++.+|++
T Consensus 38 ~~d~~~~~~~~L~NGL~v~l~~~~~~~~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l~~~Gg~ 117 (961)
T PRK15101 38 EKDPRQYQAIRLDNGMTVLLVSDPQAVKSLAALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFLKKHGGS 117 (961)
T ss_pred CCCccceEEEEeCCCCEEEEEeCCCCcceeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHHHHhCCC
Confidence 35678899999999999998554 56999999999999999999999999999999999999998767999999999999
Q ss_pred eEEeeccceeEEEEEeCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhccCCCCC
Q psy8066 137 CDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSEEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTL 216 (529)
Q Consensus 137 ~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~l~~~~~~ 216 (529)
+|++|+.+.|.|++++++++++.+|+++++++.+|.|++++++++|+++.+|+++..++| ...+.+.+...+|++|||
T Consensus 118 ~NA~T~~d~T~y~~~~~~~~l~~aL~~~ad~~~~P~f~~~~~erE~~~v~~E~~~~~~~~--~~~~~~~~~~~~~~~hp~ 195 (961)
T PRK15101 118 HNASTASYRTAFYLEVENDALPPAVDRLADAIAEPLLDPKNADRERNAVNAELTMARSRD--GMRMAQVSAETINPAHPG 195 (961)
T ss_pred ccceECCCceEEEEEcCHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcCCH--HHHHHHHHHhhCCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999877765 578888999999999999
Q ss_pred CCCCCCCccccCCC----CHHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCCCCCC
Q psy8066 217 GLPKLCPPASIGVI----NNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDT 291 (529)
Q Consensus 217 ~~~~~g~~~~l~~i----t~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~ 291 (529)
+++..|+.++|+++ ++++|++||++||+|+||+++|+| ++++++.++++++|+.+|+...... ....+.
T Consensus 196 ~~~~~G~~etl~~~~~~~~~~~L~~f~~~~Y~p~nm~lvv~G~~~~~~l~~~~~~~F~~~~~~~~~~~------~~~~~~ 269 (961)
T PRK15101 196 SRFSGGNLETLSDKPGSKLQDALVDFYQRYYSANLMKAVIYSNQPLPELAKLAADTFGRVPNKNASVP------EITVPV 269 (961)
T ss_pred ccCCCCCHHHhhcCCchHHHHHHHHHHHHhCcccceEEEEEcCCCHHHHHHHHHHHhccCCCCCCCCC------CCCCCC
Confidence 99999999999997 699999999999999999999999 9999999999999999765321100 000000
Q ss_pred CCCcccCCeeEEecCCCCCCCCCCCCCceeEEEEecCCCCCCC-CcHHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHh
Q psy8066 292 SSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDP-DFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVL 370 (529)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~-~~~~~~vl~~iLg~~~~f~~~~~~~g~~srL~~~lR 370 (529)
..+...+..+..... .++..+.++|+.|..... +..+..+++.+||++.. +.|+..|+
T Consensus 270 ~~~~~~~~~~~~~~~----------~~~~~l~l~~~~p~~~~~~~~~~~~~l~~ll~~~~~-----------g~l~~~L~ 328 (961)
T PRK15101 270 VTDAQKGIIIHYVPA----------QPRKVLRVEFRIDNNSAKFRSKTDEYISYLIGNRSP-----------GTLSDWLQ 328 (961)
T ss_pred CCHHHcCeEEEEEEC----------CCCcEEEEEEecCCcHHHHhhCHHHHHHHHhcCCCC-----------CcHHHHHH
Confidence 001111222222222 145788889987764322 33467899999997543 56777764
Q ss_pred hhcCceEEEeeecccc--CccceEEEEEEeCCC---CHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhc-cC
Q psy8066 371 NRHHWMFSATAYNHAY--ADTGLFCIHASAPPS---NVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSMLLMNL-EA 443 (529)
Q Consensus 371 ~~~gl~Y~v~a~~~~~--~~~g~~~i~~~~~~~---~~~~~i~~i~~~l~~l~~-~it~~el~~ak~~l~~~~~~~~-~~ 443 (529)
++||+|+++++...+ .+.|.|.|++.+.++ +++++++.+.++|+++++ +++++||+++|+.+..++.... .+
T Consensus 329 -~~gla~~v~s~~~~~~~~~~g~f~i~~~~~~~~~~~~~~v~~~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~ 407 (961)
T PRK15101 329 -KQGLAEGISAGADPMVDRNSGVFAISVSLTDKGLAQRDQVVAAIFSYLNLLREKGIDKSYFDELAHVLDLDFRYPSITR 407 (961)
T ss_pred -HcCccceeeeccccccCCCceEEEEEEEcChHHHHhHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhccccCCCCCC
Confidence 779999999886643 567899999998885 789999999999999987 8999999999999998875532 23
Q ss_pred hHHHHHHHHHHHHhcCCCCChhHHHHHhccCCHHHHHHHHHHhccC-CCeEEEEcCC
Q psy8066 444 RPAVFEDVGRQVLATGHRKRPSTYIESIENVTEDDIRRVASRLLTS-QPSVAARGEL 499 (529)
Q Consensus 444 ~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~-~~~~~vvG~~ 499 (529)
+...+..++..+. .............+++++.++|+++++. |.+ +..++++++.
T Consensus 408 ~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~i~~~~~~-l~~~n~~i~~~~~~ 462 (961)
T PRK15101 408 DMDYIEWLADTML-RVPVEHTLDAPYIADRYDPKAIKARLAE-MTPQNARIWYISPQ 462 (961)
T ss_pred hHHHHHHHHHHhh-hCCHHHheeCchhhhcCCHHHHHHHHhh-cCHhHEEEEEEeCC
Confidence 3334455555432 1111222334578889999999999988 555 6777788765
No 6
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-38 Score=333.06 Aligned_cols=408 Identities=14% Similarity=0.166 Sum_probs=328.8
Q ss_pred cCCCCCeEEEEcCCCCEEEE-EecCCCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHhCCE
Q psy8066 58 KDNDRNTQVTTLPNGLRVAS-ENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGI 136 (529)
Q Consensus 58 ~~~~~~~~~~~L~NGl~v~~-~~~~~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~g~~ 136 (529)
..+.++++.++|+|||++.+ .|+..+++...|.|++|+..||.+..|||||+|||+|.|+++||..+.+..+|+++||+
T Consensus 18 ~~d~r~y~~I~LpNGl~~LlisDP~a~ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhgGs 97 (937)
T COG1025 18 ALDDRKYRAIKLPNGLRALLVSDPQADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHGGS 97 (937)
T ss_pred cccCcceeEEECCCCceEEEecCCCCCccceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcCCc
Confidence 46789999999999999997 56667999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeeccceeEEEEEeCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhccCCCCC
Q psy8066 137 CDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSEEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTL 216 (529)
Q Consensus 137 ~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~l~~~~~~ 216 (529)
.||+|..+.|+|.+++.++.++.+|+.|++++.+|.|+++.+++||.+|..|..+...+. ..++.+.....+-++||+
T Consensus 98 ~NA~T~~~~T~fyFeV~~~al~~ALDrFa~ff~~PLf~~e~~dRE~~AV~sE~~~~~~~D--~~R~~~~~~~~~np~HP~ 175 (937)
T COG1025 98 HNASTAGERTAFYFEVENDALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSD--GWRMYQVQALTANPGHPL 175 (937)
T ss_pred cccccCCCceeEEEEecHHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHhcCcCch--HHHHHHHHHhhcCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999877653 678888888899999999
Q ss_pred CCCCCCCccccCC----CCHHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCCCCCC
Q psy8066 217 GLPKLCPPASIGV----INNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDT 291 (529)
Q Consensus 217 ~~~~~g~~~~l~~----it~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~ 291 (529)
.+...|+.++|.. ...++|++||++||++++|+++|.| -+.+++.+++.++|+.+|.+....+ ..+.+.
T Consensus 176 srFs~GN~~TL~~~p~~~v~~el~ef~~~~YSa~~M~lviyg~q~ldeL~~~a~~~F~~Ipn~~~~~p------~~p~p~ 249 (937)
T COG1025 176 SKFSTGNLETLSDKPGLVVQQELKEFHEKHYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIP------PIPVPV 249 (937)
T ss_pred cccCCCChhhhccCCCchHHHHHHHHHHHhcChhheEEEEecCCCHHHHHHHHHHHhCcCCCCCCCCC------CCCCCC
Confidence 9999999999988 5689999999999999999999999 9999999999999999997532221 111111
Q ss_pred CCCcccCCeeEEecCCCCCCCCCCCCCceeEEEEecCCCCCCCC-cHHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHh
Q psy8066 292 SSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDPD-FVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVL 370 (529)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~-~~~~~vl~~iLg~~~~f~~~~~~~g~~srL~~~lR 370 (529)
.....++..+++.+.. +...+.+.|+.++..... ..+...+.++||..+. .-|-.. .
T Consensus 250 ~~d~~t~~ii~i~p~~----------~~~~L~i~f~i~~~~~~~~~~~~~~~s~Lig~es~-----------gsL~~~-L 307 (937)
T COG1025 250 VTDEQTGKIIHIVPAK----------PRPRLRIYFPIDDNSAKFRSKPDEYLSHLIGNESP-----------GSLLAW-L 307 (937)
T ss_pred CChHHhCceEEeccCC----------CCceEEEEEEcCCcccccccCCHHHHHHHhccCCC-----------chHHHH-H
Confidence 2233455556665443 346789999987765543 5678899999997643 233333 4
Q ss_pred hhcCceEEEeeeccccC-ccceEEEEEEeCCC---CHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhccChH
Q psy8066 371 NRHHWMFSATAYNHAYA-DTGLFCIHASAPPS---NVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSMLLMNLEARP 445 (529)
Q Consensus 371 ~~~gl~Y~v~a~~~~~~-~~g~~~i~~~~~~~---~~~~~i~~i~~~l~~l~~-~it~~el~~ak~~l~~~~~~~~~~~~ 445 (529)
.++||+-++.++..... +.|.|.|.+....+ +.+++|..+++.++.+++ ++....|++..+-.-..+.....++.
T Consensus 308 k~~Glit~l~a~~~~~~~n~~~f~is~~LT~~Gl~~~~~VI~~~F~yl~~l~~~~~~~~~f~Elq~v~~l~f~y~~~t~~ 387 (937)
T COG1025 308 KKQGLITELSAGLDPISGNYGVFAISYELTDKGLAHYDRVIALTFQYLNLLREKGIPKYTFDELQNVLDLDFRYPSKTRP 387 (937)
T ss_pred HhccchhhhccccccccCCcceEEEEeehhhcchhhHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhcccccCCh
Confidence 55699999999877654 78889988774333 899999999999999986 78888898887777666666555443
Q ss_pred -HHHHHHHHHHHhcCCCCChhH---HHHHhccCCHHHHHHHHHHhccCCCeEEEEcCC
Q psy8066 446 -AVFEDVGRQVLATGHRKRPST---YIESIENVTEDDIRRVASRLLTSQPSVAARGEL 499 (529)
Q Consensus 446 -~~~~~l~~~~~~~~~~~~~~~---~~~~i~~vT~edi~~~a~~~l~~~~~~~vvG~~ 499 (529)
...+.++. ..... .++. ..-.+..-+.++++.+..-+...+.++..++..
T Consensus 388 ~~~~~~l~~---~m~~~-p~~~~~~~~~~~~~yd~~~~~~~l~~~~pen~R~~lis~~ 441 (937)
T COG1025 388 MDYVSWLAD---NMERE-PVEHTLYASLVLPRYDPKAIQERLALMTPENARLWLISKL 441 (937)
T ss_pred HHHHHHHHH---hcccC-ChhhhhchhhcccccCHHHHHHHHHhhCccceEEEEecCC
Confidence 33333332 22222 3333 345566778899999999888335667666544
No 7
>PTZ00432 falcilysin; Provisional
Probab=100.00 E-value=2e-36 Score=340.22 Aligned_cols=403 Identities=12% Similarity=0.117 Sum_probs=295.9
Q ss_pred CeEEEEcCCCCEEEEEecCC---CeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHhC--CEe
Q psy8066 63 NTQVTTLPNGLRVASENRFG---SFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIG--GIC 137 (529)
Q Consensus 63 ~~~~~~L~NGl~v~~~~~~~---~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~g--~~~ 137 (529)
.+...-.+||++|++.+.+. +.+.+.++|++|+ .+..|++|++|||+|+||.+|+. .++...++..| +.+
T Consensus 91 ~~~~~H~~nGl~vl~~~~~d~~~~~~~f~i~f~T~~----~d~~G~aH~LEH~~f~GS~k~p~-~~~~~~l~~~gl~~~l 165 (1119)
T PTZ00432 91 ATVYSHKKTGLQVISLKTNDSSGKEMCFDFYVPTPP----HNDKGIPHILEHSVLSGSKKYNY-KDSFSLLVQGGFNSFL 165 (1119)
T ss_pred EEEEEEcCCCCEEEEEecCCCccceeEEEEEecCCC----CCCcchhHHHHHHHhCCCCCCCc-ccHHHHHHhcCcCCCc
Confidence 34455566999999766543 4789999999997 34689999999999999999976 57777887765 779
Q ss_pred EEeeccceeEEEEEeCCC-CHHHHHHHHHHhhcCCCCCHHHH--H---------HH--------------------HHHH
Q psy8066 138 DCLSSRDTFIYAASAATS-GLDTVMKILGDVVLRPKFSEEEI--N---------MA--------------------RQTI 185 (529)
Q Consensus 138 ~~~t~~~~~~~~~~~~~~-~l~~~l~ll~~~l~~p~f~~~~~--~---------~~--------------------k~~~ 185 (529)
||+|+.|+|+|.+++.++ ++..+|+++.|.+++|.|+++++ . ++ |..|
T Consensus 166 NA~T~~D~T~Y~~~~~~e~d~~~~ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV 245 (1119)
T PTZ00432 166 NAYTFKDRTSYLFASTNEKDFYNTADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIV 245 (1119)
T ss_pred cccCCCCceEEEeccCCHHHHHHHHHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhhHH
Confidence 999999999999999875 79999999999999999998763 2 21 6779
Q ss_pred HHHHHHhhcCCChHHHHHHHHHHhccCCCCCCCCCCCCccccCCCCHHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHH
Q psy8066 186 QFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAA 264 (529)
Q Consensus 186 ~~el~~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~g~~~~l~~it~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~ 264 (529)
.+|++...++| ...+.+.+.+.+| +|||+++..|++++|.++|.++|++||++||+|+||+++++| ++++++.+++
T Consensus 246 ~~Emk~~~~~p--~~~~~~~~~~~lf-~~pY~~~~~G~~~~I~~lt~e~l~~Fh~~~Y~P~N~~l~v~Gdid~~~~l~~l 322 (1119)
T PTZ00432 246 YSEMKKRFSDP--LSFGYSVIYQNLF-SNVYKYDSGGDPKDIVELTYEELVEFYKTYYGPKTATVYFYGPNDVTERLEFV 322 (1119)
T ss_pred HHHHHHhhCCH--HHHHHHHHHHHHh-CCCCCCCCCCChHhhccCCHHHHHHHHHHhcCccceEEEEEcCCCHHHHHHHH
Confidence 99999888877 6899999999999 999999999999999999999999999999999999999999 9999999999
Q ss_pred HhhhccCCCccccccccccC-CCCCCCCCCCcccCCeeEEecCCCCCCCCCCCCCceeEEEE-ecCC-C----------C
Q psy8066 265 NKYFVDKQPVWIQDKSLVLT-DKPVIDTSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIG-LEGV-S----------H 331 (529)
Q Consensus 265 ~~~f~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~-~~~~-~----------~ 331 (529)
+++|+.+|+.........++ ...++... ..+.+. ..+....+.. ..++..+.++ |..+ . .
T Consensus 323 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~v~~~~~~~-----~~e~~~l~~~~w~~~p~~~~~~~~~~~~ 395 (1119)
T PTZ00432 323 DNYLTKHPKTGQLSHTAYREDADENLLYE-EYKDKP-KHVKKKFSSH-----SEEEENLMSVSWLLNPKHNGSKDYDKSL 395 (1119)
T ss_pred HHHHhhccccccccccccccccccccccc-ccccCC-eEEEeccCCC-----ccccccEEEEEEEcCCcccccccccccc
Confidence 99998876431100000000 00001000 011111 1111111100 0134566665 9763 2 1
Q ss_pred CC-CCcHHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceEEE-eeeccccCccceEEEEEE-eC-------CC
Q psy8066 332 QD-PDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSA-TAYNHAYADTGLFCIHAS-AP-------PS 401 (529)
Q Consensus 332 ~~-~~~~~~~vl~~iLg~~~~f~~~~~~~g~~srL~~~lR~~~gl~Y~v-~a~~~~~~~~g~~~i~~~-~~-------~~ 401 (529)
.+ +++.++.||+.+|+++++ |+|++.||+ .||+|++ .+++....+.+.|.|++. ++ ++
T Consensus 396 ~d~~~~~AL~VLs~lLggg~s-----------S~L~q~LrE-~GLa~svv~~~~~~~~~~~~f~I~l~g~~~~~~~~~~~ 463 (1119)
T PTZ00432 396 IDPVDYLALLVLNYLLLGTPE-----------SVLYKALID-SGLGKKVVGSGLDDYFKQSIFSIGLKGIKETNEKRKDK 463 (1119)
T ss_pred CCHHHHHHHHHHHHHHcCCCc-----------cHHHHHHHh-cCCCcCCCcCcccCCCCceEEEEEEEcCChHhccchhh
Confidence 23 578999999999998654 999999997 6999996 445566677889988886 33 23
Q ss_pred CHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhccC--h--HHHHHHHHHHHHhcCCCCC---hhHHHHHhcc
Q psy8066 402 NVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSMLLMNLEA--R--PAVFEDVGRQVLATGHRKR---PSTYIESIEN 473 (529)
Q Consensus 402 ~~~~~i~~i~~~l~~l~~-~it~~el~~ak~~l~~~~~~~~~~--~--~~~~~~l~~~~~~~~~~~~---~~~~~~~i~~ 473 (529)
+++++.+.+.++|+++.+ |+++++++++++++.-.+...... + -..+..+...++.++.+.. .+..++.++.
T Consensus 464 ~~~ev~~~I~~~L~~l~~eGi~~eele~a~~qlef~~rE~~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~ 543 (1119)
T PTZ00432 464 VHYTFEKVVLNALTKVVTEGFNKSAVEASLNNIEFVMKELNLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKL 543 (1119)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHH
Confidence 478999999999999976 899999999999998888765321 1 2344555555553333211 1222333332
Q ss_pred ---CCHHHHHHHHHHhccCCCe
Q psy8066 474 ---VTEDDIRRVASRLLTSQPS 492 (529)
Q Consensus 474 ---vT~edi~~~a~~~l~~~~~ 492 (529)
-+..-++.++++||-.+++
T Consensus 544 ~~~~~~~y~e~Li~k~ll~N~h 565 (1119)
T PTZ00432 544 RIDNESKYLEKLIEKHLLNNNH 565 (1119)
T ss_pred HHhcccHHHHHHHHHHccCCCe
Confidence 2335699999999866544
No 8
>KOG2583|consensus
Probab=100.00 E-value=2.5e-34 Score=271.82 Aligned_cols=402 Identities=27% Similarity=0.408 Sum_probs=319.3
Q ss_pred EEEEcCCCCEEEEEecCCCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHhCCEeEEeeccc
Q psy8066 65 QVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRD 144 (529)
Q Consensus 65 ~~~~L~NGl~v~~~~~~~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~g~~~~~~t~~~ 144 (529)
...+|.||++|...+.+++..++.|.+++||++|+..+.|++|+++...+..|.++ +...+.+..+..|+.++...++|
T Consensus 24 ~~~kl~ngL~Vas~e~~~~is~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~-sal~ivr~se~~GG~Lss~~tRe 102 (429)
T KOG2583|consen 24 KTTKLVNGLTVASREAPTAISSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQER-SALKIVRESEQLGGTLSSTATRE 102 (429)
T ss_pred hhhccccceEEEeccCCCcceEEEEEEecCccCCccccccHHHHHHHhcccCcccc-chhhhhhhhHhhCceeeeeeecc
Confidence 46689999999999999999999999999999999999999999999999999998 56799999999999999999999
Q ss_pred eeEEEEEeCCCCHHHHHHHHHHhhcCCCCCHHHHHHHH-HHHHHHHHHhhcCCChHHHHHHHHHHhccCCCCCCCCCCCC
Q psy8066 145 TFIYAASAATSGLDTVMKILGDVVLRPKFSEEEINMAR-QTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCP 223 (529)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k-~~~~~el~~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~g~ 223 (529)
.+.|++++++++++-.|.+|.+++.+|.|.+|+++... ..+..++.. ..| ...+++.+|++.|.+ .+|++++.+
T Consensus 103 ~~~~tvt~lrd~~~~~l~~L~~V~~~paFkPwEl~D~~~~ti~~~l~~--~t~--~~~a~e~lH~aAfRn-gLgnslY~p 177 (429)
T KOG2583|consen 103 LIGLTVTFLRDDLEYYLSLLGDVLDAPAFKPWELEDVVLATIDADLAY--QTP--YTIAIEQLHAAAFRN-GLGNSLYSP 177 (429)
T ss_pred eEEEEEEEecccHHHHHHHHHHhhcccCcCchhhhhhhhhhhHHHhhh--cCh--HHHHHHHHHHHHHhc-ccCCcccCC
Confidence 99999999999999999999999999999999999998 666555443 345 799999999999988 899999988
Q ss_pred ccccCCCCHHHHHHHHHhhccCCCeEEEEecCCHHHHHHHHHhhhccCCCccccccccccCCCCCCCCCCCcccCCeeEE
Q psy8066 224 PASIGVINNNTLFTYLKNYYTPTRMVVAGIGVEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDTSSATYTGGIVKE 303 (529)
Q Consensus 224 ~~~l~~it~~~l~~f~~~~~~~~~~~l~i~G~~~~~l~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (529)
--.+.+++.++|.+|-+++|...|++++.+|++++.++...++++. ++... +....+..|.+++.+.
T Consensus 178 ~~~vg~vss~eL~~Fa~k~fv~gn~~lvg~nvd~~~L~~~~~~~~~-~~~~~------------~~k~a~a~~~gGe~Rk 244 (429)
T KOG2583|consen 178 GYQVGSVSSSELKDFAAKHFVKGNAVLVGVNVDHDDLKQFADEYAP-IRDGL------------PLKPAPAKYSGGEARK 244 (429)
T ss_pred cccccCccHHHHHHHHHHHhhccceEEEecCCChHHHHHHHHHhcc-ccCCC------------CCCCCCccccCCcccc
Confidence 7899999999999999999999999999999999999999999832 22211 1111235566776654
Q ss_pred ecCCCCCCCCCCCCCceeEEEEecCCC-CCCCCcHHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHh-hhcCceEEEee
Q psy8066 304 ECNIPTFAGTSGLPELSHVVIGLEGVS-HQDPDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVL-NRHHWMFSATA 381 (529)
Q Consensus 304 ~~~~~~~~g~~~~~~~~~v~~~~~~~~-~~~~~~~~~~vl~~iLg~~~~f~~~~~~~g~~srL~~~lR-~~~gl~Y~v~a 381 (529)
.... +..++.+.-.+.. .+.+...+..++.++|+....-..| .-+..++- ..-+-.-++.+
T Consensus 245 ~~~g----------~~~~v~vagegAAa~~~k~~~a~av~~~~Lg~~~~~k~~-------t~~~~~aa~~a~~~~~s~sA 307 (429)
T KOG2583|consen 245 DARG----------NRVHVAVAGEGAAAGNLKVLAAQAVLLAALGNSAPVKRG-------TGLLSEAAGAAGEQGASASA 307 (429)
T ss_pred ccCC----------ceeEEEEecCcccccchHHHHHHHHHHHHHhcccccccc-------cchHHHHHhhccccCceeee
Confidence 4332 3455555555433 3456778889999999976532222 12222322 22223456778
Q ss_pred eccccCccceEEEEEEeCCCCHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHhcCC
Q psy8066 382 YNHAYADTGLFCIHASAPPSNVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGH 460 (529)
Q Consensus 382 ~~~~~~~~g~~~i~~~~~~~~~~~~i~~i~~~l~~l~~-~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 460 (529)
+..+|.+.|+|++++..+..++.+++......++.... +++-.....+++.+........+.. ...... . .+.
T Consensus 308 ~~a~ysDsGL~gv~~~~~~~~a~~~v~s~v~~lks~~~~~id~~~~~a~~~~l~~~~~ss~~a~---~~~~~~--~-a~~ 381 (429)
T KOG2583|consen 308 FNAPYSDSGLFGVYVSAQGSQAGKVVSSEVKKLKSALVSDIDNAKVKAAIKALKASYLSSVEAL---ELATGS--Q-ANL 381 (429)
T ss_pred ecccccCCceEEEEEEecCccHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhhcchHHH---HHhhHH--H-hcC
Confidence 88899999999999998888888898888888887764 5776666666666666554443331 111111 1 122
Q ss_pred CCChhHHHHHhccCCHHHHHHHHHHhccCCCeEEEEcCCCCCCCHHHH
Q psy8066 461 RKRPSTYIESIENVTEDDIRRVASRLLTSQPSVAARGELINFPSYEDI 508 (529)
Q Consensus 461 ~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~vvG~~~~~p~~~~~ 508 (529)
...+.+++..|++||..||++++++++..+.+++.+|+...+|++|+|
T Consensus 382 ~~~~d~~i~~id~Vt~sdV~~a~kk~~s~kls~aA~Gnl~~vPY~DEL 429 (429)
T KOG2583|consen 382 VSEPDAFIQQIDKVTASDVQKAAKKFLSGKLSLAAYGNLSNVPYLDEL 429 (429)
T ss_pred CCChHHHHHHhccccHHHHHHHHHHhccCcceeeeeccccCCcccccC
Confidence 236789999999999999999999999999999999999999999875
No 9
>KOG0959|consensus
Probab=100.00 E-value=6.9e-35 Score=310.94 Aligned_cols=405 Identities=13% Similarity=0.120 Sum_probs=316.9
Q ss_pred CCCCCeEEEEcCCCCEEEEE-ecCCCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHhCCEe
Q psy8066 59 DNDRNTQVTTLPNGLRVASE-NRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGIC 137 (529)
Q Consensus 59 ~~~~~~~~~~L~NGl~v~~~-~~~~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~g~~~ 137 (529)
.+.+.++..+|+||+++.+. |+..+++++.+-|++||..||.+.+|||||+|||+|.||.+||..+.+..++.++||+.
T Consensus 23 ~d~r~yr~~~L~Ngl~alLisDp~tD~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGss 102 (974)
T KOG0959|consen 23 GDTREYRGIELTNGLRALLISDPKTDKSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSS 102 (974)
T ss_pred CCccceeEEEecCCceEEEecCCCCCccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCcc
Confidence 56779999999999999974 54467899999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccceeEEEEEeCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhccCCCCCC
Q psy8066 138 DCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSEEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLG 217 (529)
Q Consensus 138 ~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~l~~~~~~~ 217 (529)
||+|+.++|+|.+.+..++++.+|++|++.+.+|.|++++.++|+.+|..|.+++.++. ..+..++.....-++||++
T Consensus 103 NA~T~~e~T~y~F~V~~~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D--~wr~~ql~~~l~~~~hp~~ 180 (974)
T KOG0959|consen 103 NAYTDSEHTNYYFDVQHDHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSD--GWRFDQLLRSLSNPGHPYS 180 (974)
T ss_pred ccccccccceEEEecchHHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcc--hhHHHHHHHHhcCCCCcch
Confidence 99999999999999999999999999999999999999999999999999999877653 4677777777777899999
Q ss_pred CCCCCCccccCCCC-----HHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCCCCCC
Q psy8066 218 LPKLCPPASIGVIN-----NNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDT 291 (529)
Q Consensus 218 ~~~~g~~~~l~~it-----~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~ 291 (529)
+...|..++|.... ++.|++||++||++++|+++|+| .+.+.+..++.+.|+.+++.....+. .+..+
T Consensus 181 kF~tGN~~tL~~~p~~~~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~p~------f~~~p 254 (974)
T KOG0959|consen 181 KFSTGNKKTLLEGPREIDLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPRPV------FPEPP 254 (974)
T ss_pred hccccchhhhhhccccchHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHHHHcccccccCCCCCc------ccCCC
Confidence 99999999999999 99999999999999999999999 99999999999999998765322110 01111
Q ss_pred CCCcccCCeeEEecCCCCCCCCCCCCCceeEEEEecCCCCCC-CCcHHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHh
Q psy8066 292 SSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQD-PDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVL 370 (529)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~-~~~~~~~vl~~iLg~~~~f~~~~~~~g~~srL~~~lR 370 (529)
-.+...+..+.+.+- .+-..+.+.|+.|+... =+..+...+..++|..+. +-|...|+
T Consensus 255 ~~~e~~~~~~~v~pi----------k~~~~l~is~~~p~~~~~y~~kP~~y~~hLigheg~-----------GSL~~~Lk 313 (974)
T KOG0959|consen 255 FLPEELKKLVRVVPI----------KDGRSLMISWPVPPLNHHYKSKPLRYLSHLIGHEGP-----------GSLLSYLK 313 (974)
T ss_pred CChHHhCcEEEEEec----------cccceEEEEEecCCcccccccCcHHHHHHHhccCCc-----------chHHHHHH
Confidence 112233444444432 13467888899887544 367788999999996543 45666776
Q ss_pred hhcCceEEEeeecc-ccCccceEEEEEEeC-CC--CHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhcc-Ch
Q psy8066 371 NRHHWMFSATAYNH-AYADTGLFCIHASAP-PS--NVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSMLLMNLE-AR 444 (529)
Q Consensus 371 ~~~gl~Y~v~a~~~-~~~~~g~~~i~~~~~-~~--~~~~~i~~i~~~l~~l~~-~it~~el~~ak~~l~~~~~~~~~-~~ 444 (529)
.. ||+-+..++.. ...+.+.|.|.+... .+ ++++++..+++.+..++. +.-..-+++....-...+.+..+ .+
T Consensus 314 ~~-gw~~sl~a~~~~~as~~~~f~v~idLtd~G~e~~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Frf~~k~~p 392 (974)
T KOG0959|consen 314 RL-GWATSLEAGIPEFASGYSFFNVSIDLTDEGLEHVDEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFRFQDKEPP 392 (974)
T ss_pred Hh-hchheeecCCCccccccceEEEEEEeccccchhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhheeecccCCc
Confidence 64 99999998876 345567788877743 33 789999999999998876 55555555554433334443333 34
Q ss_pred HHHHHHHHHHHHhcCCCCChhHH---HHHhccCCHHHHHHHHHHhccCCCeEEEEc
Q psy8066 445 PAVFEDVGRQVLATGHRKRPSTY---IESIENVTEDDIRRVASRLLTSQPSVAARG 497 (529)
Q Consensus 445 ~~~~~~l~~~~~~~~~~~~~~~~---~~~i~~vT~edi~~~a~~~l~~~~~~~vvG 497 (529)
...+..++..+ + .-..+++ ...+....++.|+.+...+-..+..+++++
T Consensus 393 ~~~~~~~~~nl-q---~~P~~~il~~~~ll~~~~p~~i~~~~~~L~p~n~~v~~~s 444 (974)
T KOG0959|consen 393 MEYASEIASNL-Q---YYPVEDVLTGSYLLTEFDPDLIQEVLSSLVPSNMRVILVS 444 (974)
T ss_pred HHHHHHHHhhc-c---cCChHHhhcchhhhhhcChHHHHHHHHhcCcccceeeeee
Confidence 44455554432 1 1122333 467778889999998877766677776664
No 10
>PRK15101 protease3; Provisional
Probab=100.00 E-value=1.2e-34 Score=329.24 Aligned_cols=423 Identities=10% Similarity=0.030 Sum_probs=321.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCCCCeEEEEcCCCCEEEEEecC----CCeeEEEEEEecCCCCCCCCCCCHHHHH
Q psy8066 34 PPSFQQPPLSTPLPGLPKVHYSCVKDNDRNTQVTTLPNGLRVASENRF----GSFCTIGVIIDSGSRYEQPYPSGVSHFL 109 (529)
Q Consensus 34 ~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~L~NGl~v~~~~~~----~~~~~~~l~v~~G~~~e~~~~~Gla~ll 109 (529)
...+.+|+.|++||.+....... .....++.+.++||++||+.++. .|++.+.+.+.+|...+++...|++.++
T Consensus 495 ~~~l~lP~~n~fip~~~~~~~~~--~~~~~p~~i~~~~g~~vw~~~d~~f~~~Pk~~i~~~~~~~~~~~~~~~~~l~~L~ 572 (961)
T PRK15101 495 NIALSLPELNPYIPDDFSLIKAD--KAYKHPELIVDEPGLRVVYMPSQYFADEPKADISLVLRNPKAMDSARNQVLFALN 572 (961)
T ss_pred CccCCCCCCCCccCCCCeeccCC--CCCCCCeEEEcCCCeEEEEeCCCccccCCCEEEEEEEeCCCccCCHHHHHHHHHH
Confidence 34678899999999887554322 12245799999999999986543 5999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCHHHHHHHHHHhCCEeEEeeccceeEEEEEeCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Q psy8066 110 EKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSEEEINMARQTIQFEL 189 (529)
Q Consensus 110 e~l~~~gt~~~~~~~~l~~~l~~~g~~~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el 189 (529)
..|+.. +..++....+..|.+++.. +.+++.+++++++++++.+|+++.+.+.+|.|++++|+++|+.+++++
T Consensus 573 ~~ll~~------~l~e~~y~a~~aG~~~~~~-~~~g~~i~v~g~s~~l~~ll~~l~d~l~~~~~~~~~fe~~k~~~~~~l 645 (961)
T PRK15101 573 DYLAGL------ALDQLSNQASVGGISFSTN-ANNGLMVNANGYTQRLPQLLQALLEGYFSFTPTEEQLAQAKSWYREQL 645 (961)
T ss_pred HHHHHH------HHHHHhchHHhcCcEEEEc-cCCCEEEEEEecChhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 988732 3345666666679999988 799999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCChHHHHHHHHHHhccCCCCCCCCCCCCccccCCCCHHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHHHhhh
Q psy8066 190 ENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYF 268 (529)
Q Consensus 190 ~~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~g~~~~l~~it~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~~~~f 268 (529)
++..... +...+...+ ..|.+|||+.+ .++.++|+++|.++|++||+++|.+.+++++|+| ++.+++.+++++++
T Consensus 646 ~~~~~~~-~~~~~~~~~--~~~~~~py~~~-~~~~~~l~~it~edl~~f~~~~~~~~~~~~~v~GNi~~~ea~~l~~~~~ 721 (961)
T PRK15101 646 DSAEKGK-AYEQAIMPA--QMLSQVPYFER-DERRKLLPSITLKDVLAYRDALLSGATPEFLVVGNLTEEQVTTLARDVQ 721 (961)
T ss_pred hhhcccC-cHHHHHHHH--HHHhcCCCCCH-HHHHHHHhcCCHHHHHHHHHHHHHhceEEEEEEcCCCHHHHHHHHHHHH
Confidence 9765432 122222221 34678999864 5689999999999999999999999999999999 99999999999998
Q ss_pred ccCCCccccccccccCCCCCCCCCCCcccCCeeEEecCCCCCCCCCCCCCceeEEEEecCCCCCCCCcHHHHHHHHhhcC
Q psy8066 269 VDKQPVWIQDKSLVLTDKPVIDTSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDPDFVPACVLNILMGG 348 (529)
Q Consensus 269 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~vl~~iLg~ 348 (529)
+.++....... ....+... .+....+.... . ..+..+.+.|..++. +..+..+++.|||+
T Consensus 722 ~~l~~~~~~~~-----~~~~~~~~----~~~~~~~~~~~-~-------~~~~~~~~~~~~~g~---~~~~~~v~~~lLg~ 781 (961)
T PRK15101 722 KQLGADGTEWW-----RGKDVVVD----KKQSVNFEKAG-S-------STDSALAAVYVPTGY---DEYQSSAYSSLLGQ 781 (961)
T ss_pred HHhccCCcccc-----cccceEeC----CCCeEEEecCC-C-------CCCCeEEEEEEeCCC---CCHHHHHHHHHHHH
Confidence 88754210000 00000000 11111221111 0 123455565643332 23778888889986
Q ss_pred CCCCCCCCCCCCcccHHHHHHhhhcCceEEEeeeccccCccceEEEEEEe---CCCCHHHHHHHHHHHHHHhcCCCCHHH
Q psy8066 349 GGSFSAGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIHASA---PPSNVKNIVDVLVKELVTMAGPIDADE 425 (529)
Q Consensus 349 ~~~f~~~~~~~g~~srL~~~lR~~~gl~Y~v~a~~~~~~~~g~~~i~~~~---~~~~~~~~i~~i~~~l~~l~~~it~~e 425 (529)
+ ++||||++||+++||+|+|+++.....+.+.+.+.+++ +|+.+++.++.+.+++.+..+++|++|
T Consensus 782 ~-----------~ssrlf~~LRtk~qLgY~V~s~~~~~~~~~~~~~~vqs~~~~~~~l~~~i~~f~~~~~~~l~~lt~eE 850 (961)
T PRK15101 782 I-----------IQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPAYLWQRYQAFFPQAEAKLRAMKPEE 850 (961)
T ss_pred H-----------HhHHHHHHHHHHhhhceEEEEEeeccCCeeeEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 4 34999999999999999999998887666667777764 455677777777777533235799999
Q ss_pred HHHHHHHHHHHHHHhccChHHHHHHHHHHHHhcC-CCCChhHHHHHhccCCHHHHHHHHHHh-ccC-CCeE--EEEcCCC
Q psy8066 426 LSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATG-HRKRPSTYIESIENVTEDDIRRVASRL-LTS-QPSV--AARGELI 500 (529)
Q Consensus 426 l~~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~i~~vT~edi~~~a~~~-l~~-~~~~--~vvG~~~ 500 (529)
|+++|+.++.++....++....+..+|..+..++ ..+..+++++.|++||++||+++++++ +.+ +..+ .+.|...
T Consensus 851 ~~~~k~~l~~~~~~~~~sl~~~a~~~~~~i~~~~~~fd~~~~~~~~i~~vT~edv~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (961)
T PRK15101 851 FAQYQQALINQLLQAPQTLGEEASRLSKDFDRGNMRFDSRDKIIAQIKLLTPQKLADFFHQAVIEPQGLAILSQISGSQN 930 (961)
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCcChHHHHHHHHHcCCHHHHHHHHHHHhcCCCCCEEEEEeeccCc
Confidence 9999999999999999999999999998876433 457889999999999999999999998 655 3233 4445543
No 11
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.96 E-value=2.4e-27 Score=249.98 Aligned_cols=402 Identities=13% Similarity=0.168 Sum_probs=300.4
Q ss_pred EcCCCCEEEEEecCCCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHh-CCEeEEeecccee
Q psy8066 68 TLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKI-GGICDCLSSRDTF 146 (529)
Q Consensus 68 ~L~NGl~v~~~~~~~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~-g~~~~~~t~~~~~ 146 (529)
--++|++++..+++.+...+.+.|+.- |.+..|++|.|||+.++|+.+||-.+-+...+.+. +.-+||.|+.|.|
T Consensus 26 H~~TGa~l~hi~~~d~~~vFsi~F~T~----p~dstGVaHiLEHtvlcGS~kYPvkdPF~~ml~rSLntF~NA~T~~D~T 101 (978)
T COG1026 26 HEKTGAELAHIKNEDPNNVFSIAFKTE----PHDSTGVAHILEHTVLCGSKKYPVKDPFFKMLKRSLNTFLNAFTFPDKT 101 (978)
T ss_pred eccCCceEEEecCCCcCceEEEEeecC----CCCCCCcchHHHHHhhhCCCCCCCCChHHHHHHHhHHHHHhhccCCCcc
Confidence 334899999887777778888887654 56678999999999999999999988888777665 4449999999999
Q ss_pred EEEEEeC-CCCHHHHHHHHHHhhcCCCCCHHHHHHH--------------HHHHHHHHHHhhcCCChHHHHHHHHHHhcc
Q psy8066 147 IYAASAA-TSGLDTVMKILGDVVLRPKFSEEEINMA--------------RQTIQFELENYQMRPEQETLLMDMIHAAAY 211 (529)
Q Consensus 147 ~~~~~~~-~~~l~~~l~ll~~~l~~p~f~~~~~~~~--------------k~~~~~el~~~~~~p~~~~~~~~~l~~~l~ 211 (529)
+|.+++. .+++-.+|.+..|.+++|.++++.|.++ +..|..||+....++ ...+++.+.+++|
T Consensus 102 ~YP~sS~~~~Df~NLl~VYlDavf~PlL~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~--~~~~~~~~~~slf 179 (978)
T COG1026 102 VYPASSANEKDFYNLLSVYLDAVFHPLLTKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSG--ESVLSRAMQQSLF 179 (978)
T ss_pred eeeccccCcchHHHHHHHHHHhhhCcccchHHHhhhhhccccCCCccceeeeEEeehhcccccCc--hhHHHHHHHHhhC
Confidence 9998776 6789999999999999999999999887 456778888877776 7899999999999
Q ss_pred CCCCCCCCCCCCccccCCCCHHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHHHhh-hccCCCccccccccccCCCCCC
Q psy8066 212 KDNTLGLPKLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKY-FVDKQPVWIQDKSLVLTDKPVI 289 (529)
Q Consensus 212 ~~~~~~~~~~g~~~~l~~it~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~~~~-f~~l~~~~~~~~~~~~~~~~~~ 289 (529)
++..|+....|.+..|..+|.+++++||+++|+|+|+.++++| ++.++..+.++++ +...++.....+ .++ ...+
T Consensus 180 p~~ty~~~SGG~P~~I~~LtyE~~r~FHkk~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k~~~~~~-i~~--~~~~ 256 (978)
T COG1026 180 PGTTYGVNSGGDPKNIPDLTYEEFRAFHKKHYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGKRELDVP-IPD--QKAF 256 (978)
T ss_pred CCccccccCCCCcccccccCHHHHHHHHHHhCCccceEEEEECCCCHHHHHHHHHHhhhccccccccCCC-CCc--cccc
Confidence 9999999999999999999999999999999999999999999 9999999999987 554443321100 000 0011
Q ss_pred CCCCCcccCCeeEEecCCCCCCCCCCCCCceeEEEEecCCCCCC-CCcHHHHHHHHhhcCCCCCCCCCCCCCcccHHHHH
Q psy8066 290 DTSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQD-PDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTN 368 (529)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~-~~~~~~~vl~~iLg~~~~f~~~~~~~g~~srL~~~ 368 (529)
+ ...........+.+..+ ..+..+.++|.+++..+ ++..++.||..+|-++.. +.|.+.
T Consensus 257 ~----~~~~~~~~ypi~~~~~d-----e~q~~~~lsWl~~~~~d~~~~lal~vL~~iLl~~~a-----------sPl~~~ 316 (978)
T COG1026 257 K----KPRRKVLEYPISFDEED-----EDQGLLSLSWLGGSASDAEDSLALEVLEEILLDSAA-----------SPLTQA 316 (978)
T ss_pred C----cccccceeeccCCCCCC-----CceeEEEEEEecCCcccHHHHHHHHHHHHHHccCcc-----------cHHHHH
Confidence 1 00111111111101111 36788999999887665 588999999999987655 899999
Q ss_pred HhhhcCce-EEEeeeccccCccceEEEEEE-eCCCCHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhccChH
Q psy8066 369 VLNRHHWM-FSATAYNHAYADTGLFCIHAS-APPSNVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSMLLMNLEARP 445 (529)
Q Consensus 369 lR~~~gl~-Y~v~a~~~~~~~~g~~~i~~~-~~~~~~~~~i~~i~~~l~~l~~-~it~~el~~ak~~l~~~~~~~~~~~~ 445 (529)
|.+. |++ +.++..+........|.+.++ +..+++++.-+.+++.|+.+.. +++.+.++.++.++.-++......+.
T Consensus 317 lies-glg~~~~~g~~~~~~~~~~f~v~~~gv~~ek~~~~k~lV~~~L~~l~~~gi~~~~ie~~~~q~E~s~ke~~s~pf 395 (978)
T COG1026 317 LIES-GLGFADVSGSYDSDLKETIFSVGLKGVSEEKIAKLKNLVLSTLKELVKNGIDKKLIEAILHQLEFSLKEVKSYPF 395 (978)
T ss_pred HHHc-CCCcccccceeccccceeEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhhhcCCCc
Confidence 9886 666 444433555555667777776 5667899999999999999875 89999999999999988877644443
Q ss_pred H--HHHHHHHHHHhcCCCC---ChhHHHHHhccCCHHH--HHHHHHHhccCCC--eEEEEcCC
Q psy8066 446 A--VFEDVGRQVLATGHRK---RPSTYIESIENVTEDD--IRRVASRLLTSQP--SVAARGEL 499 (529)
Q Consensus 446 ~--~~~~l~~~~~~~~~~~---~~~~~~~~i~~vT~ed--i~~~a~~~l~~~~--~~~vvG~~ 499 (529)
. ++......++.++.+. ....+.+.|++--.++ +++++++||-.++ .++++-|-
T Consensus 396 gl~l~~~~~~gw~~G~dp~~~Lr~~~~~~~Lr~~le~~~~fe~LI~ky~l~N~h~~~v~~~Ps 458 (978)
T COG1026 396 GLGLMFRSLYGWLNGGDPEDSLRFLDYLQNLREKLEKGPYFEKLIRKYFLDNPHYVTVIVLPS 458 (978)
T ss_pred cHHHHHHhccccccCCChhhhhhhHHHHHHHHHhhhcChHHHHHHHHHhhcCCccEEEEEecC
Confidence 2 2333333334444432 1244556666544455 9999999987654 44555333
No 12
>KOG2019|consensus
Probab=99.93 E-value=7.5e-24 Score=212.11 Aligned_cols=403 Identities=13% Similarity=0.179 Sum_probs=299.5
Q ss_pred cCCCCEEEEEecCCCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHh-CCEeEEeeccceeE
Q psy8066 69 LPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKI-GGICDCLSSRDTFI 147 (529)
Q Consensus 69 L~NGl~v~~~~~~~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~-g~~~~~~t~~~~~~ 147 (529)
-.-|.++...+++.+.-.+++.++.. |.+..|+.|++||...+|+.+||-++-+.+.|... ..-+||.|..|+|.
T Consensus 59 ~~Tgae~lhl~reD~N~vFsI~FrTp----p~dstGiPHILEHtvLCGS~KYPvrdPFfkmLnrSLatFmNAfT~pD~T~ 134 (998)
T KOG2019|consen 59 KKTGAEVLHLDREDENNVFSIVFRTP----PKDSTGIPHILEHTVLCGSRKYPVRDPFFKMLNRSLATFMNAFTAPDYTF 134 (998)
T ss_pred cCCCceeEeeccCCCCceeEEEeecC----CCccCCCchhhhhheeeccCcCcccChHHHHHHHHHHHHHhhccCCCcce
Confidence 35789999887776666677777665 45567999999999999999999998888888665 34489999999999
Q ss_pred EEEEe-CCCCHHHHHHHHHHhhcCCCCCHHHHHHH------------------HHHHHHHHHHhhcCCChHHHHHHHHHH
Q psy8066 148 YAASA-ATSGLDTVMKILGDVVLRPKFSEEEINMA------------------RQTIQFELENYQMRPEQETLLMDMIHA 208 (529)
Q Consensus 148 ~~~~~-~~~~l~~~l~ll~~~l~~p~f~~~~~~~~------------------k~~~~~el~~~~~~p~~~~~~~~~l~~ 208 (529)
|-++. .++++..+.++..|..+.|.+.+.+|.+| |..|..|++....+| ...+...+.+
T Consensus 135 yPfattN~kDf~NL~dVYLDAtffPklr~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~--~~if~~~~Qq 212 (998)
T KOG2019|consen 135 YPFATTNTKDFYNLRDVYLDATFFPKLRKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDP--DYIFGMLFQQ 212 (998)
T ss_pred eecccCChHHHHHHHHHhhhcccchHHHhhhhhhhcceeecCCCCCCcccceeeeeeeecccccccCh--hHHHHHHHHH
Confidence 98765 46799999999999999999998888887 677888999888877 5799999999
Q ss_pred hccCCCCCCCCCCCCccccCCCCHHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCC
Q psy8066 209 AAYKDNTLGLPKLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKP 287 (529)
Q Consensus 209 ~l~~~~~~~~~~~g~~~~l~~it~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~~~~f~~l~~~~~~~~~~~~~~~~ 287 (529)
++|+++.||....|++-.|.+++.++|++||++||+|+|+.+.-+| ++.++...+++..|....++....
T Consensus 213 ~L~p~~tYgv~SGGDPl~IpdLt~eelk~FHr~~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s~--------- 283 (998)
T KOG2019|consen 213 ALFPENTYGVNSGGDPLDIPDLTYEELKEFHRQHYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELSS--------- 283 (998)
T ss_pred hhCccccccccCCCCcccCccccHHHHHHHHHhccCCCcceeEeecCchHHHHHHHHHHhhcccccccccC---------
Confidence 9999999999999999999999999999999999999999999999 999999999998777654332111
Q ss_pred CCCCCCCcccCCeeEEecCCCCCCCCCCCCCceeEEEEecCCCCCC-CCcHHHHHHHHhhcCCCCCCCCCCCCCcccHHH
Q psy8066 288 VIDTSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQD-PDFVPACVLNILMGGGGSFSAGGPGKGMYTRLY 366 (529)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~-~~~~~~~vl~~iLg~~~~f~~~~~~~g~~srL~ 366 (529)
.+.....-..+..+.+.... ..|.. ...|+.+++.|..++..+ -+..++.+|..+|-++.+ |.+|
T Consensus 284 kv~~qk~f~kp~rvve~~p~--d~~~~-p~Kq~~~s~s~L~~~p~d~~etfaL~~L~~Ll~~gps-----------Sp~y 349 (998)
T KOG2019|consen 284 KVTFQKLFDKPRRVVEKGPA--DPGDL-PKKQTKCSNSFLSNDPLDTYETFALKVLSHLLLDGPS-----------SPFY 349 (998)
T ss_pred ccccccccccCceeeeecCC--CCCCC-ccceeEEEEEeecCCchhHHHHHHHHHHHHHhcCCCc-----------cHHH
Confidence 11111111122222222221 11212 236788888888766443 478899999999987654 9999
Q ss_pred HHHhhh-cCceEEEeeeccccCccceEEEEEEe-CCCCHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhccC
Q psy8066 367 TNVLNR-HHWMFSATAYNHAYADTGLFCIHASA-PPSNVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSMLLMNLEA 443 (529)
Q Consensus 367 ~~lR~~-~gl~Y~v~a~~~~~~~~g~~~i~~~~-~~~~~~~~i~~i~~~l~~l~~-~it~~el~~ak~~l~~~~~~~~~~ 443 (529)
+.|.|. .|.-+++.+++..+...+.|.|.++. ..++++.+.+.+..+++++.+ +++.+.+++..+++.-++..+-..
T Consensus 350 k~LiESGLGtEfsvnsG~~~~t~~~~fsVGLqGvseediekve~lV~~t~~~lae~gfd~drieAil~qiEislk~qst~ 429 (998)
T KOG2019|consen 350 KALIESGLGTEFSVNSGYEDTTLQPQFSVGLQGVSEEDIEKVEELVMNTFNKLAETGFDNDRIEAILHQIEISLKHQSTG 429 (998)
T ss_pred HHHHHcCCCcccccCCCCCcccccceeeeeeccccHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhhhhhccccc
Confidence 999886 33347888999888888999999874 556899999999999999987 899999999998888777665443
Q ss_pred hHH-HHHHHHHHHHhcCCCCCh---hHHH----HHhccCCHHHHHHHHHHhccCCC-e--EEEEcCCC
Q psy8066 444 RPA-VFEDVGRQVLATGHRKRP---STYI----ESIENVTEDDIRRVASRLLTSQP-S--VAARGELI 500 (529)
Q Consensus 444 ~~~-~~~~l~~~~~~~~~~~~~---~~~~----~~i~~vT~edi~~~a~~~l~~~~-~--~~vvG~~~ 500 (529)
..- ++..+..-+....++-.+ ++.+ ..+..-...=.+..+++|+..++ + +.+.++.+
T Consensus 430 fGL~L~~~i~~~W~~d~DPfE~Lk~~~~L~~lk~~l~ek~~~lfq~lIkkYilnn~h~~t~smqpd~e 497 (998)
T KOG2019|consen 430 FGLSLMQSIISKWINDMDPFEPLKFEEQLKKLKQRLAEKSKKLFQPLIKKYILNNPHCFTFSMQPDPE 497 (998)
T ss_pred hhHHHHHHHhhhhccCCCccchhhhhhHHHHHHHHHhhhchhHHHHHHHHHHhcCCceEEEEecCCch
Confidence 321 222333333322222111 2223 33333355668899999987654 3 34445544
No 13
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=2.9e-21 Score=203.51 Aligned_cols=418 Identities=11% Similarity=0.075 Sum_probs=312.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCCCCeEEEEcCCCCEEEEEecC---C-CeeEEEEEEecCCCCCCCCCCCHHHHH
Q psy8066 34 PPSFQQPPLSTPLPGLPKVHYSCVKDNDRNTQVTTLPNGLRVASENRF---G-SFCTIGVIIDSGSRYEQPYPSGVSHFL 109 (529)
Q Consensus 34 ~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~L~NGl~v~~~~~~---~-~~~~~~l~v~~G~~~e~~~~~Gla~ll 109 (529)
...+.+|.+|++||.....+... .....++...-..|.++|+.+.+ . |++.+.+.++......++....+..+.
T Consensus 474 ~~~l~lP~~N~fIp~~~~~~~~~--~~~~~p~ll~~~~~~~~wy~~~d~F~~~PK~~v~~~irsp~~~~s~r~~Vl~~l~ 551 (937)
T COG1025 474 SIELSLPEPNPFIPDDVSLIKSE--KKFTFPQLLSEDPNLRLWYLKEDYFAVEPKASVSLAIRSPHASRSPRNQVLTELY 551 (937)
T ss_pred cccccCCCCCCCCCccccccccc--cCCCCchhhhcCCCceEEEecCCccccCCcceeEEEEeCcccccCHHHHHHHHHH
Confidence 34666899999999987664322 23334456666678888875432 4 999999999998888877777777788
Q ss_pred HHhhhcCCCCCCCHHHHHHHHHHhCCEeEEeeccceeEEEEEeCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Q psy8066 110 EKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSEEEINMARQTIQFEL 189 (529)
Q Consensus 110 e~l~~~gt~~~~~~~~l~~~l~~~g~~~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el 189 (529)
..+++....++.+.+. .-|.+++...+.+++.+++++.++.++.++..+.+.+..-.++++.|+..|..+.+++
T Consensus 552 ~~la~dal~~~~y~A~------~aG~sfs~~~~~~Gl~ltisGft~~lp~L~~~~l~~l~~~~~~~~~f~~~K~~~~~~~ 625 (937)
T COG1025 552 AYLANDALDKLSYQAS------LAGLSFSLAANSNGLDLTISGFTQRLPQLLRAFLDGLFSLPVDEDRFEQAKSQLSEEL 625 (937)
T ss_pred HHHHHHHHHhhhhHHH------hcceEEEeecCCCceEEEeeccccchHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 8887766655533322 3388899999999999999999999999999999999999999999999999999999
Q ss_pred HHhhc-CCChHHHHHHHHHHhccCCCCCCCCCCCCccccCCCCHHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHHHhh
Q psy8066 190 ENYQM-RPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKY 267 (529)
Q Consensus 190 ~~~~~-~p~~~~~~~~~l~~~l~~~~~~~~~~~g~~~~l~~it~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~~~~ 267 (529)
+.... .| ...+.+.+...+-++++... ...+.+++++.+++.+|...++.+....+.+.| ++.+++.++++..
T Consensus 626 ~~a~~~~p--~~~~~~~l~~l~~~~~~s~~---e~~~~l~~v~~~e~~~f~~~l~~~~~lE~lv~Gn~~~~da~~l~~~~ 700 (937)
T COG1025 626 KNALTGKP--YRQALDGLTGLLQVPYWSRE---ERRNALESVSVEEFAAFRDTLLNGVHLEMLVLGNLTEADATNLAETL 700 (937)
T ss_pred HhhhhcCC--HHHHHHHhhhhhCCCCcCHH---HHHHHhhhccHHHHHHHHHHhhhccceeeeeeccchHHHHHHHHHHH
Confidence 96554 44 67888877777765544322 236788999999999999999999999999999 9999999998876
Q ss_pred hccCCCccccccccccCCCCCCCCCCCcccCCeeEEecCCCCCCCCCCCCCceeEEEEecCCCCC-CCCcHHHHHHHHhh
Q psy8066 268 FVDKQPVWIQDKSLVLTDKPVIDTSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQ-DPDFVPACVLNILM 346 (529)
Q Consensus 268 f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~-~~~~~~~~vl~~iL 346 (529)
...++...... ...+..-...++.......... +..+..++.+. ...+ .++.+...++.+++
T Consensus 701 ~~~l~~~~s~~---------~~~~~~~~~~~~~~~~e~~~~~-------~~~an~~i~~~-~~~~~~~~~a~s~Ll~~l~ 763 (937)
T COG1025 701 QKKLPAIGSTW---------YRNPSVYLLKGGTRIFETVGGE-------SDSANAAILYP-QQYDEIKSSALSSLLGQLI 763 (937)
T ss_pred HhhhcccCCcc---------cCCCceeccCCCeeEeeeccCC-------cccccceeEec-cccchHHHHHHHHHHHHHH
Confidence 66555321100 0000111112332222221111 12222333333 2222 34556667888888
Q ss_pred cCCCCCCCCCCCCCcccHHHHHHhhhcCceEEEeeeccccCccceEEEEEEe---CCCCHHHHHHHHHHHHHHhcCCCCH
Q psy8066 347 GGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIHASA---PPSNVKNIVDVLVKELVTMAGPIDA 423 (529)
Q Consensus 347 g~~~~f~~~~~~~g~~srL~~~lR~~~gl~Y~v~a~~~~~~~~g~~~i~~~~---~~~~~~~~i~~i~~~l~~l~~~it~ 423 (529)
. ..+|.+||++++|+|.|++++....+...+.|+++. .|+...+.+.++.+.+.....++++
T Consensus 764 ~---------------~~ff~~LRTkeQLGY~Vfs~~~~v~~~~gi~f~vqS~~~~p~~L~~r~~~F~~~~~~~l~~ms~ 828 (937)
T COG1025 764 H---------------PWFFDQLRTKEQLGYAVFSGPREVGRTPGIGFLVQSNSKSPSYLLERINAFLETAEPELREMSE 828 (937)
T ss_pred h---------------HHhHHHhhhhhhcceEEEecceeecCccceEEEEeCCCCChHHHHHHHHHHHHHHHHHHHhCCH
Confidence 7 799999999999999999999988888778888874 4556788888888888776668999
Q ss_pred HHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHhcCC--CCChhHHHHHhccCCHHHHHHHHHHhccCC----CeEEEEc
Q psy8066 424 DELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGH--RKRPSTYIESIENVTEDDIRRVASRLLTSQ----PSVAARG 497 (529)
Q Consensus 424 ~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~i~~vT~edi~~~a~~~l~~~----~~~~vvG 497 (529)
++|+..|+.+++++.....+....+..+|..+ ..|. .+.++..++.++.+|.+++.+++...+... ..+-+.|
T Consensus 829 e~Fe~~k~alin~il~~~~nl~e~a~r~~~~~-~~g~~~Fd~~ek~i~~vk~LT~~~l~~f~~~~l~~~~g~~l~~~i~g 907 (937)
T COG1025 829 EDFEQIKKALINQILQPPQNLAEEASRLWKAF-GRGNLDFDHREKKIEAVKTLTKQKLLDFFENALSYEQGSKLLSHIRG 907 (937)
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHh-ccCCCCcCcHHHHHHHHHhcCHHHHHHHHHHhhcccccceeeeeeec
Confidence 99999999999999999999999999999444 3443 367788999999999999999999998753 3345556
No 14
>KOG0961|consensus
Probab=99.90 E-value=1.8e-21 Score=194.82 Aligned_cols=398 Identities=15% Similarity=0.155 Sum_probs=271.2
Q ss_pred CCCEEEEEecCCCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHH-HhCCEeEEeeccceeEEE
Q psy8066 71 NGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLE-KIGGICDCLSSRDTFIYA 149 (529)
Q Consensus 71 NGl~v~~~~~~~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~-~~g~~~~~~t~~~~~~~~ 149 (529)
-|++|...+.+++.++=.+.|..- -....|+.|-+||+.|+|+++||-. .+.+.+. ..-+..||.|+.|+|.|+
T Consensus 28 Tkl~va~~~~pts~vhG~f~v~TE----a~~d~G~PHTLEHL~FMGSKkYP~k-GvLd~~anr~l~dtNAwTDtD~T~Yt 102 (1022)
T KOG0961|consen 28 TKLRVAIGEVPTSMVHGAFSVVTE----ADSDDGLPHTLEHLVFMGSKKYPFK-GVLDVIANRCLADTNAWTDTDHTAYT 102 (1022)
T ss_pred cceEEEEeecCCcceeeeEEeeee----ecCCCCCchhHHHHhhhccccCCcc-cHHHHhhcchhcccccccccCcceEE
Confidence 468888777666666555555433 3446799999999999999999865 4444444 345679999999999999
Q ss_pred EEeC-CCCHHHHHHHHHHhhcCCCCCHHHHHHH----------HHHHHHHHHHhhcCCChHHHHHHHHHHhccC-CCCCC
Q psy8066 150 ASAA-TSGLDTVMKILGDVVLRPKFSEEEINMA----------RQTIQFELENYQMRPEQETLLMDMIHAAAYK-DNTLG 217 (529)
Q Consensus 150 ~~~~-~~~l~~~l~ll~~~l~~p~f~~~~~~~~----------k~~~~~el~~~~~~p~~~~~~~~~l~~~l~~-~~~~~ 217 (529)
++.. .+.+-++|..+.|-+..|.+++++|..+ +..|..|++..+..- +..+.+...+..|| .++|.
T Consensus 103 LStag~dGFlklLPvy~dHiL~P~Ltdeaf~TEVyHI~geg~d~GVVySEMq~~es~~--~~im~~~~~~~~yP~~sgY~ 180 (1022)
T KOG0961|consen 103 LSTAGSDGFLKLLPVYIDHILTPMLTDEAFATEVYHITGEGNDAGVVYSEMQDHESEM--ESIMDRKTKEVIYPPFSGYA 180 (1022)
T ss_pred eecccccchHHHhHHHHHhhcCcccchhhhhhheeeecCCCCccceeehhhhhhhccc--chhhhhhhheeecCCCCCce
Confidence 9887 6789999999999999999999999877 556778888766543 57888889999998 67888
Q ss_pred CCCCCCccccCCCCHHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHHHhhhccCCCcccccccc-c-cCCCCCCCCCCC
Q psy8066 218 LPKLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSL-V-LTDKPVIDTSSA 294 (529)
Q Consensus 218 ~~~~g~~~~l~~it~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~~~~f~~l~~~~~~~~~~-~-~~~~~~~~~~~~ 294 (529)
....|.+..|+.+|.+.+|+||+++|+++||++.|+| +++++++...+.+-..++......++. + |.....+....+
T Consensus 181 ~eTGG~~knLR~lt~ekIR~yHK~~Y~~sN~cviVcG~v~~d~lL~~m~~~~neile~~s~vP~~~~rPf~~tn~~~~i~ 260 (1022)
T KOG0961|consen 181 VETGGRLKNLRELTLEKIRDYHKKFYHLSNMCVIVCGMVDHDQLLEIMNNVENEILEHMSTVPDHFPRPFSFTNALSDIK 260 (1022)
T ss_pred eccCCChhhHHHhhHHHHHHHHHHhccccceEEEEecCcCHHHHHHHHHHHHhhhhhccccCCCCCCCCcccccCcccCC
Confidence 8889999999999999999999999999999999999 999999998887766554322211100 0 000001111111
Q ss_pred cccCCeeEEecCCCCCCCCCCCCCceeEEEEecCCCCCC-CCcHHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhh-
Q psy8066 295 TYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQD-PDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNR- 372 (529)
Q Consensus 295 ~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~-~~~~~~~vl~~iLg~~~~f~~~~~~~g~~srL~~~lR~~- 372 (529)
... .-.++.. ..+ ..+..+.++|.+++..+ ....++.+|-.+|....- +.+-+.+-+-
T Consensus 261 e~t--~~tVefp--~~D-----es~G~v~~aW~g~s~sD~~t~~a~~vL~dyls~sav-----------apf~~~fVeie 320 (1022)
T KOG0961|consen 261 EST--VHTVEFP--TDD-----ESRGAVEVAWFGHSPSDLETHSALHVLFDYLSNSAV-----------APFQKDFVEIE 320 (1022)
T ss_pred ccc--eeeeecC--Ccc-----cccceEEEEEcCCCHHHhhhHHHHHHHHHHhccccc-----------cccccceEEec
Confidence 111 1112111 111 35678999999988665 467789999999986422 4555554432
Q ss_pred cCceEEEeeeccccCccceEEEEE-EeCCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhccChHH--HHH
Q psy8066 373 HHWMFSATAYNHAYADTGLFCIHA-SAPPSNVKNIVDVLVKELVTMAGPIDADELSRAKKQLQSMLLMNLEARPA--VFE 449 (529)
Q Consensus 373 ~gl~Y~v~a~~~~~~~~g~~~i~~-~~~~~~~~~~i~~i~~~l~~l~~~it~~el~~ak~~l~~~~~~~~~~~~~--~~~ 449 (529)
-.++-+++......-++ .+...+ +..-+++++.-..+++.+.+-+ .|+-+.+.....+-+-++..+.+.... .+.
T Consensus 321 DP~assv~f~~~~~vrc-~i~L~f~gVP~EKi~~~~~k~l~~l~et~-~iDm~Rm~~~i~~t~~~yL~nlE~n~~s~fms 398 (1022)
T KOG0961|consen 321 DPLASSVSFHIAEGVRC-DIRLNFAGVPVEKIDECAPKFLDKLVETA-NIDMERMGYLIDQTILNYLVNLETNAPSDFMS 398 (1022)
T ss_pred Cccccceeeeeecccce-eEEEeecCCcHHHhhhhhHHHHHHHHHhc-ccCHHHHHHHHHHHHHHHHHhhhcCChHHHHH
Confidence 24555555443322222 233333 3566778877777777665332 477666666666666667777665532 233
Q ss_pred HHHHHHHhcCCCC-C------hhHHHHHhccCCHHHHHHHHHHhccCCCeEEEEc
Q psy8066 450 DVGRQVLATGHRK-R------PSTYIESIENVTEDDIRRVASRLLTSQPSVAARG 497 (529)
Q Consensus 450 ~l~~~~~~~~~~~-~------~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~vvG 497 (529)
.+....+.++..+ . .-++.+.+.....+|.+++.++||..++++.|++
T Consensus 399 ~ii~d~~ygnedg~~l~~~lk~l~~~~~L~~w~~kdW~~Llnk~Fven~s~tVia 453 (1022)
T KOG0961|consen 399 HIIGDQLYGNEDGELLKKRLKELDFLKKLKSWPAKDWVQLLNKYFVENPSATVIA 453 (1022)
T ss_pred HHhhhhhccCcchhHHHHHHHhHHHHHHHhhccHHHHHHHHHHHhccCCCeEEEe
Confidence 3333333233221 1 1345688889999999999999999777666664
No 15
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.90 E-value=5.3e-23 Score=181.04 Aligned_cols=147 Identities=31% Similarity=0.597 Sum_probs=137.1
Q ss_pred EEEEEec-CCCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHhCCEeEEeeccceeEEEEEe
Q psy8066 74 RVASENR-FGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASA 152 (529)
Q Consensus 74 ~v~~~~~-~~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~g~~~~~~t~~~~~~~~~~~ 152 (529)
+|++.++ ..+.+++.+++++|+++|++.+.|++|+++||++.|+.+++ ..++.+.++.+|+.+++.++++.+.|.+++
T Consensus 1 ~V~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~-~~~l~~~l~~~G~~~~~~t~~d~t~~~~~~ 79 (149)
T PF00675_consen 1 KVVLVEDPGSPVVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYS-SDELQEELESLGASFNASTSRDSTSYSASV 79 (149)
T ss_dssp EEEEEESTTSSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSB-HHHHHHHHHHTTCEEEEEEESSEEEEEEEE
T ss_pred CEEEEEcCCCCEEEEEEEEeeccCCCCCCCCchhhhhhhhcccccchhh-hhhhHHHhhhhccccceEecccceEEEEEE
Confidence 5777655 67999999999999999999999999999999999999985 489999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhccCCCCCCCCCCCC
Q psy8066 153 ATSGLDTVMKILGDVVLRPKFSEEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCP 223 (529)
Q Consensus 153 ~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~g~ 223 (529)
++++++.+|++|++++.+|.|++++|+++|..+..+++....+| ...+.+.+++.+|.++||++++.||
T Consensus 80 ~~~~~~~~l~~l~~~~~~P~f~~~~~~~~r~~~~~ei~~~~~~~--~~~~~~~l~~~~f~~~p~~~~~~~~ 148 (149)
T PF00675_consen 80 LSEDLEKALELLADMLFNPSFDEEEFEREREQILQEIEEIKENP--QELAFEKLHSAAFRGHPYGNPLLGP 148 (149)
T ss_dssp EGGGHHHHHHHHHHHHHSBGGCHHHHHHHHHHHHHHHHHHTTHH--HHHHHHHHHHHHHTTSGGGSHSS-T
T ss_pred ecccchhHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHCCH--HHHHHHHHHHHHhccCCCCCCCCCC
Confidence 99999999999999999999999999999999999999988766 7899999999999999999998886
No 16
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.88 E-value=1.7e-21 Score=177.46 Aligned_cols=181 Identities=25% Similarity=0.411 Sum_probs=142.8
Q ss_pred CCCHHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCCCCCCCCCcccCCeeEEecCC
Q psy8066 229 VINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDTSSATYTGGIVKEECNI 307 (529)
Q Consensus 229 ~it~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (529)
++|.++|++||++||+|+||+++++| ++++++.++++++|+.+|....... . .............+..+......
T Consensus 1 ~it~e~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~ 76 (184)
T PF05193_consen 1 NITLEDLRAFYKKFYRPSNMTLVIVGDIDPDELEKLIEKYFGSLPKSSIPPK-P---KPRSPPLPPSEPQGKEIVIPSKD 76 (184)
T ss_dssp C--HHHHHHHHHHHSSGGGEEEEEEESSGHHHHHHHHHHHHTTSSHSCHGGS-S---SCSSSSSSCGGSSEEEEEEEESS
T ss_pred CCCHHHHHHHHHHhcCccceEEEEEcCccHHHHHHHHHhhhhhhcccccccc-c---ccccccccccccccccccccccc
Confidence 47999999999999999999999999 9999999999999999875421000 0 01111111112222222222221
Q ss_pred CCCCCCCCCCCceeEEEEecCCCC-CCCCcHHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceEEEeeecccc
Q psy8066 308 PTFAGTSGLPELSHVVIGLEGVSH-QDPDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAY 386 (529)
Q Consensus 308 ~~~~g~~~~~~~~~v~~~~~~~~~-~~~~~~~~~vl~~iLg~~~~f~~~~~~~g~~srL~~~lR~~~gl~Y~v~a~~~~~ 386 (529)
..+..+.++|++++. +.++..++.+++.+|+++. .++|+..||++.+++|++++++..+
T Consensus 77 ---------~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-----------~s~l~~~lr~~~~l~y~v~~~~~~~ 136 (184)
T PF05193_consen 77 ---------ESQSIVSIAFPGPPIKDSKDYFALNLLSSLLGNGM-----------SSRLFQELREKQGLAYSVSASNSSY 136 (184)
T ss_dssp ---------SSSEEEEEEEEEEETGTSTTHHHHHHHHHHHHCST-----------TSHHHHHHHTTTTSESEEEEEEEEE
T ss_pred ---------ccccccccccccccccccchhhHHHHHHHHHhcCc-----------cchhHHHHHhccccceEEEeeeecc
Confidence 146899999999887 8899999999999999763 3999999999999999999998878
Q ss_pred CccceEEEEEEeCCCCHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHH
Q psy8066 387 ADTGLFCIHASAPPSNVKNIVDVLVKELVTMAG-PIDADELSRAKKQL 433 (529)
Q Consensus 387 ~~~g~~~i~~~~~~~~~~~~i~~i~~~l~~l~~-~it~~el~~ak~~l 433 (529)
.+.|.|.+++.+++++++++++.+.++++++.+ |++++||+++|++|
T Consensus 137 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 137 RDSGLFSISFQVTPENLDEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp SSEEEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred ccceEEEEEEEcCcccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 889999999999999999999999999999987 79999999999875
No 17
>KOG0959|consensus
Probab=99.84 E-value=5.7e-18 Score=182.01 Aligned_cols=421 Identities=9% Similarity=0.042 Sum_probs=307.5
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCCCCeEEEEcCCCCEEEEEecC---CCeeEEEEEEecCCCCCCCCCCCHHHHHHH
Q psy8066 35 PSFQQPPLSTPLPGLPKVHYSCVKDNDRNTQVTTLPNGLRVASENRF---GSFCTIGVIIDSGSRYEQPYPSGVSHFLEK 111 (529)
Q Consensus 35 ~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~L~NGl~v~~~~~~---~~~~~~~l~v~~G~~~e~~~~~Gla~lle~ 111 (529)
+.+.+|..|+.||.+........ .....++.+.-....+||+.+.+ .|++.+.+.+........+...+++.++..
T Consensus 482 ~~l~lP~~nefI~t~f~~~~~~~-~~~~~P~Li~~~~~~~lw~k~dd~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~~ 560 (974)
T KOG0959|consen 482 PELHLPTPNEFIPTDFSILPAPI-PKLEYPVLISDTPFSELWYKQDDKFNVPKAYTKFDFICPGATQSPLNSVLSTLYVR 560 (974)
T ss_pred ccccCCCCCcccccccccccccC-ccccCCeeeecCCcceeEEecccccccchhheeeeecCcccccCHHHHHHHHHHHH
Confidence 56778899999996543322211 12223345555566889986443 489999999999888888888999999998
Q ss_pred hhhcCCCCCCCHHHHHHHHHHhCCEeEEeeccceeEEEEEeCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Q psy8066 112 LAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSEEEINMARQTIQFELEN 191 (529)
Q Consensus 112 l~~~gt~~~~~~~~l~~~l~~~g~~~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~ 191 (529)
++......+ .-.....|..++.+.+..+..+++.+.++++..+++.+.+++.+-.+++++|+..++.+.+++++
T Consensus 561 ~l~d~l~E~------~Y~A~~aGl~~~~~~s~~G~~~~v~Gfnekl~~ll~~~~~~~~~f~~~~~rf~iike~~~~~~~n 634 (974)
T KOG0959|consen 561 LLKDQLNEY------LYPALLAGLTYSLSSSSKGVELRVSGFNEKLPLLLEKVVQMMANFELDEDRFEIIKELLKRELRN 634 (974)
T ss_pred HHHHHHhHH------HHHHHhccceEEeeecCCceEEEEeccCcccHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhh
Confidence 886644443 33344458899999999999999999999999999999999999999999999999999999997
Q ss_pred -hhcCCChHHHHHHHHHHhccCCCCCCCCCCCCccccCCCCHHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHHHhhhc
Q psy8066 192 -YQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFV 269 (529)
Q Consensus 192 -~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~g~~~~l~~it~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~~~~f~ 269 (529)
...+| ...+.+.+.-.+-...+... -..+.++.++.+++..|-..++++..+.++|.| ++.+++.++++....
T Consensus 635 ~~~~~p--~~~a~~~~~lll~~~~W~~~---e~~~al~~~~le~~~~F~~~~~~~~~~e~~i~GN~te~~A~~l~~~v~d 709 (974)
T KOG0959|consen 635 HAFDNP--YQLANDYLLLLLEESIWSKE---ELLEALDDVTLEDLESFISEFLQPFHLELLIHGNLTEKEALQLLKSVLD 709 (974)
T ss_pred hhhccH--HHHHHHHHHHHhhccccchH---HHHHHhhcccHHHHHHHHHHHhhhhheEEEEecCcchHHHHHHHHHHHh
Confidence 44455 45666655544433333322 226778889999999999999999999999999 999999998766665
Q ss_pred cCCCccccccccccCCCCCCCCCCCcccCCeeEEecCCCCCCCCCCCCCceeEEEEecCCCCCCCCcHHHHHHHHhhcCC
Q psy8066 270 DKQPVWIQDKSLVLTDKPVIDTSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDPDFVPACVLNILMGGG 349 (529)
Q Consensus 270 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~vl~~iLg~~ 349 (529)
.+ +........................|....+....... ...+.+.+.++....+..+...+.++.+++.
T Consensus 710 ~l-~~~~~~~~p~~~~~~~~~~~~~lp~G~~~~~~~~~n~~------~~ns~i~~~~Q~~~~~~~~~~~~~L~~~li~-- 780 (974)
T KOG0959|consen 710 IL-KSAAPNSRPLFRSEHLPRREIQLPNGDYYFYRHLLNKT------DDNSCIEVYYQIGVQDTRDNAVLGLLEQLIK-- 780 (974)
T ss_pred hh-hccCCCCccccccccCcccceeccCCceEEEEcccccC------CCCceEEEEEEcccchhHHHHHHHHHHHHhc--
Confidence 54 21111110000000011111122234444333331111 2557888888864444567788899999998
Q ss_pred CCCCCCCCCCCcccHHHHHHhhhcCceEEEeeeccccCccceEEEEEE--eCCCCHHHHHHHHHHHHHHhcCCCCHHHHH
Q psy8066 350 GSFSAGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIHAS--APPSNVKNIVDVLVKELVTMAGPIDADELS 427 (529)
Q Consensus 350 ~~f~~~~~~~g~~srL~~~lR~~~gl~Y~v~a~~~~~~~~g~~~i~~~--~~~~~~~~~i~~i~~~l~~l~~~it~~el~ 427 (529)
..+|+.||++++|+|.+++......+.-.+.|.++ ..++.++..|..+++.+......+++++|+
T Consensus 781 -------------ep~Fd~LRTkeqLGYiv~~~~r~~~G~~~~~i~Vqs~~~~~~le~rIe~fl~~~~~~i~~m~~e~Fe 847 (974)
T KOG0959|consen 781 -------------EPAFDQLRTKEQLGYIVSTGVRLNYGTVGLQITVQSEKSVDYLEERIESFLETFLEEIVEMSDEEFE 847 (974)
T ss_pred -------------cchHHhhhhHHhhCeEeeeeeeeecCcceeEEEEccCCCchHHHHHHHHHHHHHHHHHHhcchhhhh
Confidence 78999999999999999988766545545555555 456678888888888887766679999999
Q ss_pred HHHHHHHHHHHHhccChHHHHHHHHHHHHhcCCC-CChhHHHHHhccCCHHHHHHHHHHhccC
Q psy8066 428 RAKKQLQSMLLMNLEARPAVFEDVGRQVLATGHR-KRPSTYIESIENVTEDDIRRVASRLLTS 489 (529)
Q Consensus 428 ~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~i~~vT~edi~~~a~~~l~~ 489 (529)
..+.+++........+.......+|......... +..+..++.++.+|++|+..+...++..
T Consensus 848 ~~~~~lI~~~~ek~~~l~~e~~~~w~ei~~~~y~f~r~~~~v~~l~~i~k~~~i~~f~~~~~~ 910 (974)
T KOG0959|consen 848 KHKSGLIASKLEKPKNLSEESSRYWDEIIIGQYNFDRDEKEVEALKKITKEDVINFFDEYIRK 910 (974)
T ss_pred hhHHHHHHHHhhcCcchhHHHHHHHHHHHhhhhcchhhHHHHHHHHhhhHHHHHHHHHhhccc
Confidence 9999999999999988888888888887644432 5567788999999999999999999864
No 18
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.81 E-value=2.4e-17 Score=174.90 Aligned_cols=397 Identities=14% Similarity=0.176 Sum_probs=264.9
Q ss_pred EEEEcCCCCEEEEEecC-CCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHhCCEeE----E
Q psy8066 65 QVTTLPNGLRVASENRF-GSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICD----C 139 (529)
Q Consensus 65 ~~~~L~NGl~v~~~~~~-~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~g~~~~----~ 139 (529)
....-.|..+|+..+.. ...+.+.++++.+.. .....+-+.-|...+...||.++ +..++.++++.+-+.++ +
T Consensus 528 l~~~~~~~~~v~~~~~~tn~i~yl~~~~~~~~l-~~~llpyL~L~~~~l~~lgt~~~-~y~e~~~~i~~~TGgis~~~~~ 605 (978)
T COG1026 528 LETEVSNEAKVLHHDLFTNGITYLRLYFDLDML-PSELLPYLPLFAFALTNLGTETY-SYKELLNQIERHTGGISVSLSV 605 (978)
T ss_pred eeeeccCCcceEEeecCCCCeEEEEEEeecCCC-ChhhhhhHHHHHHHHHhcCCCCc-CHHHHHHHHHHHhCCceeeEee
Confidence 44556677888877765 579999999999554 34445667777777777899997 67899999988844333 3
Q ss_pred eecc-------ceeEEEEEeCCCCHHHHHHHHHHhhcCCCC-CHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhcc
Q psy8066 140 LSSR-------DTFIYAASAATSGLDTVMKILGDVVLRPKF-SEEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAY 211 (529)
Q Consensus 140 ~t~~-------~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f-~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~l~ 211 (529)
.++. ..+++++++.+++.+++++++.+++.++.| +.+++....++....+.+...+.. ...+.......++
T Consensus 606 ~~~~~~~~~~~~~~~i~~K~l~~k~~~~~~~i~~~l~~~~F~D~~Rlkell~q~~~~l~~~vr~sG-~~~A~~~~~s~~~ 684 (978)
T COG1026 606 DTDPGDDGEYRPSFSISGKALRSKVEKLFELIREILANTDFHDRERLKELLEQYLSDLTSSVRNSG-HSIASSLANSRLS 684 (978)
T ss_pred ccCCCccccccceEEEEEEehhhhhhHHHHHHHHHHhcCCcCcHHHHHHHHHHHHhhhHHhhhccc-hHHHHHHhhcccc
Confidence 3332 368899999999999999999999999999 677777777777777775544322 3444444444444
Q ss_pred CCCCCCCCCCCCccc---cCC--------CC---HHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHHHhhhccCCCccc
Q psy8066 212 KDNTLGLPKLCPPAS---IGV--------IN---NNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWI 276 (529)
Q Consensus 212 ~~~~~~~~~~g~~~~---l~~--------it---~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~~~~f~~l~~~~~ 276 (529)
....+.....| ... |+. .. .+.|++.+++++..+|+.++++| .+ .+.+.+++.|.++.....
T Consensus 685 ~~~~l~e~~~G-l~q~k~i~~l~~~~~~~~~~ei~~kL~~l~~~i~~~~n~~i~i~~~~~--~~~~~~e~~l~~~~~~~~ 761 (978)
T COG1026 685 SAGALKELLNG-LSQVKFLRELSSNFEENFEKEIADKLQALRKKIFQTNNLRIAIIGDID--KILDLLENPLLKFLEHLL 761 (978)
T ss_pred cchhHHHHhcC-hhHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhhcCceEEEEecChh--hhHHHHHHHhhhhhcccC
Confidence 33332222111 111 111 11 35788899999999999777777 43 223333333333221100
Q ss_pred cccccccCCCCCCCCCCCccc-CCeeEEecCCCCCCCCCCCCCceeEEEEe--cCCCCCCCCcHHHHHHHHhhcCCCCCC
Q psy8066 277 QDKSLVLTDKPVIDTSSATYT-GGIVKEECNIPTFAGTSGLPELSHVVIGL--EGVSHQDPDFVPACVLNILMGGGGSFS 353 (529)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~v~~~~--~~~~~~~~~~~~~~vl~~iLg~~~~f~ 353 (529)
+.... + .++......... .....+- .. +-++..++| ...++.++|..++.|++.+|+.
T Consensus 762 ~~~~~-~--~~~~~~~~~~~~~~~~~~ii-~~----------p~a~~~l~fs~~~~~y~hpd~~~l~vls~~L~~----- 822 (978)
T COG1026 762 PGFEL-P--TPPKNPHLDLISSLSEATII-PS----------PVAYNALAFSIGGLPYTHPDYAALQVLSEYLGS----- 822 (978)
T ss_pred ccccc-C--CCCCCcchhhhccccceEEe-cc----------HHHHHHHhhhccCCCCCCccchHHHHHHHHhcc-----
Confidence 00000 0 001100001111 1111111 11 113444555 4678899999999999999994
Q ss_pred CCCCCCCcccHHHHHHhhhcCceEEEeeeccccCccceEEEEEEeCCCCHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHH
Q psy8066 354 AGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIHASAPPSNVKNIVDVLVKELVTMAG-PIDADELSRAKKQ 432 (529)
Q Consensus 354 ~~~~~~g~~srL~~~lR~~~gl~Y~v~a~~~~~~~~g~~~i~~~~~~~~~~~~i~~i~~~l~~l~~-~it~~el~~ak~~ 432 (529)
..||.+||++ |+||++++..... .|.|.++...+|+ +.+..+.+.+.++.+.. .++++++++++-.
T Consensus 823 ---------~~lw~~IR~~-GGAYGa~as~~~~--~G~f~f~sYRDPn-~~kt~~v~~~~v~~l~s~~~~~~d~~~~ilg 889 (978)
T COG1026 823 ---------GYLWNKIREK-GGAYGASASIDAN--RGVFSFASYRDPN-ILKTYKVFRKSVKDLASGNFDERDLEEAILG 889 (978)
T ss_pred ---------chhHHHHHhh-ccccccccccccC--CCeEEEEecCCCc-HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 6999999997 9999998877544 7899999888888 67788888888888888 4999999999999
Q ss_pred HHHHHHHhccChHHHHHHHHHHHHhcCCCCChhHHHHHhccCCHHHHHHHHHHhccC---CCeEEEEcCCC
Q psy8066 433 LQSMLLMNLEARPAVFEDVGRQVLATGHRKRPSTYIESIENVTEDDIRRVASRLLTS---QPSVAARGELI 500 (529)
Q Consensus 433 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~---~~~~~vvG~~~ 500 (529)
.++.+... +++......-....+.+-.++..+.+++.|..+|++||+++.++|+.+ ..+++++|..+
T Consensus 890 ~i~~~d~p-~sp~~~~~~s~~~~~sg~~~~~~qa~re~~l~vt~~di~~~~~~yl~~~~~e~~i~~~~~~e 959 (978)
T COG1026 890 IISTLDTP-ESPASEGSKSFYRDLSGLTDEERQAFRERLLDVTKEDIKEVMDKYLLNFSSENSIAVFAGEE 959 (978)
T ss_pred hhcccccc-cCCcceehhhHHHHHhcCCHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccceEEEEechh
Confidence 98887654 566554443333444444456778899999999999999999999974 57788887644
No 19
>PTZ00432 falcilysin; Provisional
Probab=99.74 E-value=1.1e-15 Score=173.03 Aligned_cols=399 Identities=11% Similarity=0.011 Sum_probs=258.5
Q ss_pred EcCCCCEEEEEecCC-CeeEEEEEEecCCCCCCCCCCCHHHHHHHhh-hcCCCCCCCHHHHHHHHHHhCCEeEEe----e
Q psy8066 68 TLPNGLRVASENRFG-SFCTIGVIIDSGSRYEQPYPSGVSHFLEKLA-FNSTSEYVNKDAIAQSLEKIGGICDCL----S 141 (529)
Q Consensus 68 ~L~NGl~v~~~~~~~-~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~-~~gt~~~~~~~~l~~~l~~~g~~~~~~----t 141 (529)
...+|++|+..+-++ ..+++.++++.....+ +......++..++ ..||.++ +.+++...++..-+.++++ +
T Consensus 664 ~~~~~~~~~~~~~~TnGi~y~~~~fdl~~l~~--e~~~yl~L~~~~l~~~gT~~~-s~~el~~~i~~~tGg~~~~~~~~~ 740 (1119)
T PTZ00432 664 SDGGSVTVLVHPIESRGILYLDFAFSLDSLTV--DELKYLNLFKALLKENGTDKL-SSEEFTYKREKNLGGLSASTAFYS 740 (1119)
T ss_pred ccCCCcceEEEecCCCCeEEEEEEecCCCCCH--HHHhhHHHHHHHHHhcCCCCC-CHHHHHHHHHHhCCCeEEEEEEec
Confidence 346889998876554 5899999999887543 3344444554444 4577876 7899999999885554432 2
Q ss_pred c------------cceeEEEEEeCCCCHHHHHHHHHHhhcCCCCCHHH-HHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q psy8066 142 S------------RDTFIYAASAATSGLDTVMKILGDVVLRPKFSEEE-INMARQTIQFELENYQMRPEQETLLMDMIHA 208 (529)
Q Consensus 142 ~------------~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~-~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~ 208 (529)
+ ...+.+++++..++++++++++.+++.++.|++.+ +....++....+++...+.. ...+...+..
T Consensus 741 ~~~~~~~~~~~~~~~~~~v~~k~l~~~~~~~~~l~~eil~~~~f~d~~rl~~il~~~~~~~~~~~~~~G-h~~A~~~~~s 819 (1119)
T PTZ00432 741 ETNNLTYDDPYNGVGYLNVRAKVLKHKVNEMVDIVLEALKDADFSNSKKGVEILKRKINGMKTVFSSKG-HKFALKRMKS 819 (1119)
T ss_pred cccccccCcccccceEEEEEEEEhhhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHh
Confidence 2 22688899999999999999999999999998754 66555665555554333211 1222222211
Q ss_pred hccCCCCCCCCCCC--CccccCCC-----------CHHHHHHHHHhhccCCCeEEEEec-C-CHHHHHHHHHhhhccCCC
Q psy8066 209 AAYKDNTLGLPKLC--PPASIGVI-----------NNNTLFTYLKNYYTPTRMVVAGIG-V-EHEALVEAANKYFVDKQP 273 (529)
Q Consensus 209 ~l~~~~~~~~~~~g--~~~~l~~i-----------t~~~l~~f~~~~~~~~~~~l~i~G-~-~~~~l~~~~~~~f~~l~~ 273 (529)
.+-....+.....| -..-|+.+ =.+.|.+.+++.+..+|+.+.++| . ..+.+.+.+...+..++.
T Consensus 820 ~~S~~~~~~e~~~G~~~~~fl~~l~~~~~e~~~~~v~~~L~~i~~~i~~~~~l~~~vt~~~~~~~~~~~~~~~~~~~l~~ 899 (1119)
T PTZ00432 820 KFSVSDYADELVNGYSQLLFLKETLVPLAEKDWSKVESKLNEIRNKLLSMKNLTVNVTGDSELLDSLLDDSTTFLKKLSS 899 (1119)
T ss_pred cCCHHHHHHHHhcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCcCCcEEEEEeCHHHHHHHHHHHHHHHHhccc
Confidence 11000000000010 01111111 134578889999999999999999 5 456676766666666542
Q ss_pred cccccc-ccccCCCCCC----C-CCCCcccCCeeEEecCCCCCCCCCCCCCceeEEEEecCCCCCCCCcHHHHHHHHhhc
Q psy8066 274 VWIQDK-SLVLTDKPVI----D-TSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDPDFVPACVLNILMG 347 (529)
Q Consensus 274 ~~~~~~-~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~vl~~iLg 347 (529)
...... ...+ .+.. . .........+..+. +. ...++..+.......+++..++.|+..+|.
T Consensus 900 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~-p~----------~V~yv~~~~~~~~~~~~~~~~l~Vl~~~L~ 966 (1119)
T PTZ00432 900 TFKENDNKSSD--KVWVKEVLDKKLMESVDKNEFIVL-PT----------RVNFVGMGGKLFDKSDKVDGSFQVIVHYLK 966 (1119)
T ss_pred ccccccccccc--cccccccccccccCCcccceEEEc-cC----------ceeEEEEecccccCCCccCHHHHHHHHHHc
Confidence 110000 0000 0000 0 00000011222221 11 224555554434456677999999999998
Q ss_pred CCCCCCCCCCCCCcccHHHHHHhhhcCceEEEeeeccccCccceEEEEEEeCCCCHHHHHHHHHHHHHHhcC---CCCHH
Q psy8066 348 GGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIHASAPPSNVKNIVDVLVKELVTMAG---PIDAD 424 (529)
Q Consensus 348 ~~~~f~~~~~~~g~~srL~~~lR~~~gl~Y~v~a~~~~~~~~g~~~i~~~~~~~~~~~~i~~i~~~l~~l~~---~it~~ 424 (529)
. +.||++||++ |++|++++.+. ..|.|.++...+|. +.+.++.+.+..+.+++ .+|++
T Consensus 967 ~--------------~yLw~~IR~~-GGAYG~~~~~~---~~G~~~f~SYRDPn-~~~Tl~~f~~~~~~l~~~~~~~~~~ 1027 (1119)
T PTZ00432 967 N--------------SYLWKTVRMS-LGAYGVFADLL---YTGHVIFMSYADPN-FEKTLEVYKEVASALREAAETLTDK 1027 (1119)
T ss_pred c--------------ccchHHHccc-CCccccCCccC---CCCeEEEEEecCCC-HHHHHHHHHHHHHHHHhcCCCCCHH
Confidence 4 6999999997 99999986653 35899999888887 66788888888877765 39999
Q ss_pred HHHHHHHHHHHHHHHhccChHHHHHHHHHHHHhcCCCCChhHHHHHhccCCHHHHHHHHHHhccC--CCeEEEEcCCCCC
Q psy8066 425 ELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGHRKRPSTYIESIENVTEDDIRRVASRLLTS--QPSVAARGELINF 502 (529)
Q Consensus 425 el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~--~~~~~vvG~~~~~ 502 (529)
++++++-..++.+... .++..........++.+...+..+++++.|-++|++||+++|+++... ...++|+|+.+.+
T Consensus 1028 ~l~~~iig~~~~~D~p-~~p~~~g~~~~~~~l~g~t~e~rq~~R~~il~~t~edi~~~a~~~~~~~~~~~~~v~g~~~~~ 1106 (1119)
T PTZ00432 1028 DLLRYKIGKISNIDKP-LHVDELSKLALLRIIRNESDEDRQKFRKDILETTKEDFYRLADLMEKSKEWEKVIAVVNSKTS 1106 (1119)
T ss_pred HHHHHHHHHHhccCCC-CChHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhccCeEEEEECHHHh
Confidence 9999999999887664 466555544444445555567789999999999999999999999974 4688999987754
Q ss_pred C
Q psy8066 503 P 503 (529)
Q Consensus 503 p 503 (529)
-
T Consensus 1107 ~ 1107 (1119)
T PTZ00432 1107 D 1107 (1119)
T ss_pred h
Confidence 4
No 20
>KOG2019|consensus
Probab=99.66 E-value=9.6e-14 Score=140.29 Aligned_cols=394 Identities=15% Similarity=0.105 Sum_probs=252.8
Q ss_pred EEEEcCCCCEEEEEecCC-CeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHhCCEeEEe--e
Q psy8066 65 QVTTLPNGLRVASENRFG-SFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCL--S 141 (529)
Q Consensus 65 ~~~~L~NGl~v~~~~~~~-~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~g~~~~~~--t 141 (529)
..+..-||++|...+... ..+++.+.+..++.-+.- .+-+.-|.+.++..||... +..++.+.+..+.+.++++ +
T Consensus 562 ~~v~dingvkv~~~dl~tngi~Y~r~~~~l~~~p~eL-~PylPlfc~sll~lGt~~l-sf~el~qqI~rkTGGiS~~p~~ 639 (998)
T KOG2019|consen 562 LEVGDINGVKVQRCDLFTNGITYTRVVFDLNSLPEEL-LPYLPLFCQSLLNLGTGDL-SFVELEQQIGRKTGGISVSPLV 639 (998)
T ss_pred eeeeeccCceeEEeeccCCceEEEEEeeccccCcHHh-hcchHHHHHHHHhcCCCcc-cHHHHHHHhhhhcCceeeccee
Confidence 456677999998877654 689999999999864322 4567888899999999986 7789999998885444433 3
Q ss_pred ccc--------eeEEEEEeCCCCHHHHHHHHHHhhcCCCCCH-HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhccC
Q psy8066 142 SRD--------TFIYAASAATSGLDTVMKILGDVVLRPKFSE-EEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYK 212 (529)
Q Consensus 142 ~~~--------~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~-~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~l~~ 212 (529)
..+ .+.+...+...+++.+++++..++.++.|++ +.|+...+....++.+.-.+..+ ..+.-.....+-+
T Consensus 640 ~s~~~~d~p~~~i~~~~~~l~rn~~dlfel~n~il~e~~f~n~dkfkvlvk~s~s~~~n~i~dsGH-~~A~~rs~a~l~~ 718 (998)
T KOG2019|consen 640 SSDDGMDEPELGIVFSGSMLDRNADDLFELWNKILQETCFTNQDKFKVLVKQSASRMTNGIADSGH-GFAAARSAAMLTP 718 (998)
T ss_pred ccCCCCCccceeEEechhhhcCChhHHHHHHHHHhcccCcccHHHHHHHHHHHHHHhhccCCcccc-hhHhhhhhcccCc
Confidence 222 3566677788899999999999999999985 44555555555555543222221 1111111112222
Q ss_pred CCCCCCCCCCCccccCCC------C-------HHHHHHHHHhhccCCCeEEEEec--CCHHHHHHHHHhhhccCCCcccc
Q psy8066 213 DNTLGLPKLCPPASIGVI------N-------NNTLFTYLKNYYTPTRMVVAGIG--VEHEALVEAANKYFVDKQPVWIQ 277 (529)
Q Consensus 213 ~~~~~~~~~g~~~~l~~i------t-------~~~l~~f~~~~~~~~~~~l~i~G--~~~~~l~~~~~~~f~~l~~~~~~ 277 (529)
..+... .+|-.++++=+ . .+.|.+..+.+...++|.+.|.. ..+..+++.+++++..+|...+.
T Consensus 719 ag~i~E-qlgGl~ql~fl~~L~~~~d~d~~~i~~kL~eIrk~ll~~ng~~~~itAd~~q~~~vEkav~kFl~~lp~e~p~ 797 (998)
T KOG2019|consen 719 AGWISE-QLGGLSQLEFLHRLEEKVDNDWEPIVSKLTEIRKSLLNTNGMIVNITADPKQLTNVEKAVEKFLDSLPRENPS 797 (998)
T ss_pred ccchHh-HhcchHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEecCcccchhHHHHHHHHHHhccccCCC
Confidence 222211 11212222111 1 23455666666678999998886 78899999999999988742111
Q ss_pred ccccccCCCCCCCCCCCcccCCeeEEecCCCCCCCCCCCCCceeEEEEecCCCCCCCCcHHHHHHHHhhcCCCCCCCCCC
Q psy8066 278 DKSLVLTDKPVIDTSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDPDFVPACVLNILMGGGGSFSAGGP 357 (529)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~vl~~iLg~~~~f~~~~~ 357 (529)
+. ...+-. ..+ .....+++.... -+..++.-+..+.+++++|-.++.|++.+|..
T Consensus 798 g~-----~st~d~-r~p-~~~~~i~~~~P~---------fqvnyvgka~~~vpyt~~d~asl~vlS~~lt~--------- 852 (998)
T KOG2019|consen 798 GS-----KSTWDA-RLP-LRSEAIRVVIPT---------FQVNYVGKAGLGVPYTHPDGASLQVLSKLLTN--------- 852 (998)
T ss_pred CC-----ccCccc-cCC-CCceeEEEeccc---------cchhhhhhhcccccCCCCCCcHHHHHHHHHHH---------
Confidence 11 001100 000 011111111110 01133444455677889999999999999984
Q ss_pred CCCcccHHHHHHhhhcCceEEEeeeccccCccceEEEEEEeCCCCHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHH
Q psy8066 358 GKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIHASAPPSNVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSM 436 (529)
Q Consensus 358 ~~g~~srL~~~lR~~~gl~Y~v~a~~~~~~~~g~~~i~~~~~~~~~~~~i~~i~~~l~~l~~-~it~~el~~ak~~l~~~ 436 (529)
.+|+.++|++ |.+|+.++.+... .|.|.++...+|. .-+.++.+...-+-++. .+++++|++||-....+
T Consensus 853 -----k~Lh~evRek-GGAYGgg~s~~sh--~GvfSf~SYRDpn-~lktL~~f~~tgd~~~~~~~~~~dldeAkl~~f~~ 923 (998)
T KOG2019|consen 853 -----KWLHDEVREK-GGAYGGGCSYSSH--SGVFSFYSYRDPN-PLKTLDIFDGTGDFLRGLDVDQQDLDEAKLGTFGD 923 (998)
T ss_pred -----HHHHHHHHHh-cCccCCccccccc--cceEEEEeccCCc-hhhHHHhhcchhhhhhcCCccccchhhhhhhhccc
Confidence 7999999998 8999998887665 8999999998888 33455666555555565 49999999999988877
Q ss_pred HHHhccChHHHHHHHHHHHHhcCCCCChhHHHHHhccCCHHHHHHHHHHhccC-C--CeEEEEcCCC
Q psy8066 437 LLMNLEARPAVFEDVGRQVLATGHRKRPSTYIESIENVTEDDIRRVASRLLTS-Q--PSVAARGELI 500 (529)
Q Consensus 437 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~-~--~~~~vvG~~~ 500 (529)
..... .|.. ..+.+ .+.+-..+..+...+.|-+++..|+.++|.+|+.. + ..+++.|+..
T Consensus 924 VDap~-~P~~--kG~~~-fl~gvtDemkQarREqll~vSl~d~~~vae~yl~~~~~~~~vav~g~E~ 986 (998)
T KOG2019|consen 924 VDAPQ-LPDA--KGLLR-FLLGVTDEMKQARREQLLAVSLKDFKAVAEAYLGVGDKGVAVAVAGPED 986 (998)
T ss_pred ccCCc-CCcc--cchHH-HHhcCCHHHHHHHHHHHHhhhHHHHHHHHHHHhccCCcceEEEeeCccC
Confidence 54432 3322 22333 33233334556678999999999999999999864 2 3455556543
No 21
>KOG0961|consensus
Probab=99.14 E-value=3.6e-09 Score=107.59 Aligned_cols=402 Identities=12% Similarity=0.077 Sum_probs=235.0
Q ss_pred CCCeeEEEEEEecCCCCCCCCCCCHH---HHHHH--hhhcCCCCCC---CHHHHHHHHHHhCCEeEE-----eeccceeE
Q psy8066 81 FGSFCTIGVIIDSGSRYEQPYPSGVS---HFLEK--LAFNSTSEYV---NKDAIAQSLEKIGGICDC-----LSSRDTFI 147 (529)
Q Consensus 81 ~~~~~~~~l~v~~G~~~e~~~~~Gla---~lle~--l~~~gt~~~~---~~~~l~~~l~~~g~~~~~-----~t~~~~~~ 147 (529)
++..|.+..+++.-+.. ..-.+-+. .+++. .+..|+..-+ +.+++.+.+....++.+. .+.++-++
T Consensus 559 ps~Fvel~fl~dss~i~-~sl~pYl~~f~~l~~~~pa~ldgtiptp~~~s~~~v~~~~~s~~id~si~~g~~G~~~~lvn 637 (1022)
T KOG0961|consen 559 PSKFVELFFLLDSSNIS-ISLRPYLFLFTDLLFESPAMLDGTIPTPVLTSADDVAKHFTSDLIDHSIQVGVSGLYDRLVN 637 (1022)
T ss_pred chHHHhHhhhhccccCc-hhhhhHHHHHHHHHhcCHHHhcCCCCcchhhhHHHHHHHHHhhhhhhhhcccccccchhhee
Confidence 34667777777766554 22222222 22221 1244543322 344555555444333222 24467789
Q ss_pred EEEEeCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhccCCCCCCCCC--CCCcc
Q psy8066 148 YAASAATSGLDTVMKILGDVVLRPKFSEEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPK--LCPPA 225 (529)
Q Consensus 148 ~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~--~g~~~ 225 (529)
+.+++-.++.+.+.+++...+....|+++++....+..+.++..++.+- ...+.......+|++..+.... +--+.
T Consensus 638 ~~Ikv~a~~Y~~~v~Wi~~~l~~~VfD~~Ri~~~~~~~l~~i~~~KRdg--~~vlss~~~~~lY~~~slk~s~d~L~~Ek 715 (1022)
T KOG0961|consen 638 LRIKVGADKYPLLVKWIQIFLQGVVFDPSRIHQCAQKLLGEIRDRKRDG--CTVLSSAVASMLYGKNSLKISFDELVLEK 715 (1022)
T ss_pred EEEEEccCCcchhHHHHHHHhhhhccCHHHHHHHHHHHHhhhhhhhcCc--cEehHHHHHHHHhcccchhhcccHHHHHH
Confidence 9999999999999999999999999999999999999999998776654 4677778888888876654421 11011
Q ss_pred ccCCCC------H----HHHHHHHHhhccCCCeEEEEec-CC-HHHHHHHHHhhhccCCCccccccccccCCCCCCCCCC
Q psy8066 226 SIGVIN------N----NTLFTYLKNYYTPTRMVVAGIG-VE-HEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDTSS 293 (529)
Q Consensus 226 ~l~~it------~----~~l~~f~~~~~~~~~~~l~i~G-~~-~~~l~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~ 293 (529)
-++.|. . +.+.....-...-+.+.+.++| ++ .++...-...+..+..-+.+... ... ........
T Consensus 716 ~l~ei~~~v~n~~~~Il~~~e~mR~y~l~~n~~~ihvvgDI~kid~~~~~Wn~l~~~~~~~nP~~~-f~~--tf~~~~~~ 792 (1022)
T KOG0961|consen 716 LLEEISKDVMNNPEAILEKLEQMRSYALFSNGVNIHVVGDIDKIDPKMLSWNWLQADPRFGNPGHQ-FSA--TFEAGENV 792 (1022)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHhhcceEEEEEeehhcCCccccCchhhhcCcccCCchhh-ccc--ccccCccc
Confidence 112221 1 1222222211223567788888 75 22222112222222111100000 000 00000000
Q ss_pred CcccC---CeeEEecCCCCCCCCCCCCCceeEEEEecC-CCCCCCCcHHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHH
Q psy8066 294 ATYTG---GIVKEECNIPTFAGTSGLPELSHVVIGLEG-VSHQDPDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNV 369 (529)
Q Consensus 294 ~~~~~---~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~-~~~~~~~~~~~~vl~~iLg~~~~f~~~~~~~g~~srL~~~l 369 (529)
+...| +.+.+. .|..+.+.+....++ .+|.+++++...++.++|+.-. ..+|+.|
T Consensus 793 s~e~gsssk~~~I~---------~p~sESs~l~~sip~~~~w~dpel~~~~l~~~YL~~~e------------GPfW~~I 851 (1022)
T KOG0961|consen 793 SLELGSSSKELLIG---------VPGSESSFLYQSIPLDANWNDPELIPAMLFGQYLSQCE------------GPFWRAI 851 (1022)
T ss_pred ceeccCCcceeEec---------CCCccccceeeecccccccCCcchhHHHHHHHHHHhcc------------cchhhhh
Confidence 11111 122221 122344556666664 5689999999999999999543 6999999
Q ss_pred hhhcCceEEEeeeccccCccceEEEEEEeCCCCHHHHHHHHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHhccChHH
Q psy8066 370 LNRHHWMFSATAYNHAYADTGLFCIHASAPPSNVKNIVDVLVKELVTMAG---PIDADELSRAKKQLQSMLLMNLEARPA 446 (529)
Q Consensus 370 R~~~gl~Y~v~a~~~~~~~~g~~~i~~~~~~~~~~~~i~~i~~~l~~l~~---~it~~el~~ak~~l~~~~~~~~~~~~~ 446 (529)
|.. ||+|+++.+..+.+..-.|.|+...++-+. .+.-++.++.+.. .+++.+|+-||...+..+........+
T Consensus 852 RG~-GLAYGanm~~~~d~~~~~~~iyr~ad~~ka---ye~~rdiV~~~vsG~~e~s~~~~egAk~s~~~~~~~~Eng~~~ 927 (1022)
T KOG0961|consen 852 RGD-GLAYGANMFVKPDRKQITLSIYRCADPAKA---YERTRDIVRKIVSGSGEISKAEFEGAKRSTVFEMMKRENGTVS 927 (1022)
T ss_pred ccc-chhccceeEEeccCCEEEEEeecCCcHHHH---HHHHHHHHHHHhcCceeecHHHhccchHHHHHHHHHHhcccee
Confidence 997 999999988777766666667766665544 4444555555543 399999999999988877554322222
Q ss_pred H-HHH-HHHHHHhcCCCCChhHHHHHhccCCHHHHHHHHHHhccC----CCeEEEEcCCCCCCCHHHHHHHhhcCC
Q psy8066 447 V-FED-VGRQVLATGHRKRPSTYIESIENVTEDDIRRVASRLLTS----QPSVAARGELINFPSYEDIHSGIQNNG 516 (529)
Q Consensus 447 ~-~~~-l~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~----~~~~~vvG~~~~~p~~~~~~~~~~~~~ 516 (529)
- +.. +..... ....+....+++.|.+||.+|+.+..+.|+.+ +..++++ .......++++++|-..|
T Consensus 928 ~a~~~~~l~~~~-q~~~~fn~~~leri~nvT~~~~~~~~~~y~~~~Fds~~~va~i--~~hpaKle~~~e~F~e~g 1000 (1022)
T KOG0961|consen 928 GAAKISILNNFR-QTPHPFNIDLLERIWNVTSEEMVKIGGPYLARLFDSKCFVASI--AVHPAKLEEMKEAFPEGG 1000 (1022)
T ss_pred chHHHHHHHHHH-hcCCcccHHHHHHHHHhhHHHHHHhcccceehhhcccCceEEE--eccHHHHHHHHHHhhcCC
Confidence 1 111 112222 22234668899999999999999999998754 4455444 223446778888776444
No 22
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=98.04 E-value=4.4e-05 Score=75.48 Aligned_cols=182 Identities=14% Similarity=0.163 Sum_probs=112.4
Q ss_pred EEcCCCCEEEEEecCCCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHhCCEeEEeecccee
Q psy8066 67 TTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTF 146 (529)
Q Consensus 67 ~~L~NGl~v~~~~~~~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~g~~~~~~t~~~~~ 146 (529)
+.|+||+||.+.+.-..-+.+++. +.|.-.+-.+-.|+|||+||.+-+ |.+. .+. .||+|++.+.
T Consensus 2 IvL~NGVRiFin~~M~KDIYlGIs-~FGFe~DI~~iLGiAHLLEHILIs----FD~~-~F~---------ANASTaRsYM 66 (590)
T PF03410_consen 2 IVLSNGVRIFINPSMKKDIYLGIS-NFGFENDIGEILGIAHLLEHILIS----FDSS-KFL---------ANASTARSYM 66 (590)
T ss_pred eEecCceEEEecCccccceEEeec-ccccccchHHHHhHHHHHHHHeee----cchH-Hhh---------cccchhhhhh
Confidence 579999999998877667888776 778777778889999999999855 4322 221 3899999999
Q ss_pred EEEEEeCCCC-HHHHHHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhccCCCCCCCCC
Q psy8066 147 IYAASAATSG-LDTVMKILGDVVLR-----PKFSEEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPK 220 (529)
Q Consensus 147 ~~~~~~~~~~-l~~~l~ll~~~l~~-----p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~ 220 (529)
.|-+.+.+.. -.++++-+..+++. -.|+...++.-.+++..|.- -+.. .-.+++.+.-+ .++.-|.
T Consensus 67 SFWC~si~g~~~~DAvrtliSWFF~~g~Lk~~F~~~~i~~hikELENEYY---FRnE-vfHCmDvLtfL-~gGDLYN--- 138 (590)
T PF03410_consen 67 SFWCKSIRGRTYIDAVRTLISWFFDNGKLKDNFSRSKIKNHIKELENEYY---FRNE-VFHCMDVLTFL-GGGDLYN--- 138 (590)
T ss_pred hhhhhhccCCChhHHHHHHHHHhhcCCcccccccHhHHHHHHHHHhhhhh---hhhh-HHHHHHHHHHh-cCCcccC---
Confidence 8887776543 34455555544433 24555555444444333322 1111 34666666433 3343443
Q ss_pred CCCccccCCCCH--HHHHHHHHhhccCCCeEEEEecCCHHHHHHHHHhhhccCCC
Q psy8066 221 LCPPASIGVINN--NTLFTYLKNYYTPTRMVVAGIGVEHEALVEAANKYFVDKQP 273 (529)
Q Consensus 221 ~g~~~~l~~it~--~~l~~f~~~~~~~~~~~l~i~G~~~~~l~~~~~~~f~~l~~ 273 (529)
.|....+.+++. +-|.+-.++ ....|++++|--+++ .+..++++.||.+|.
T Consensus 139 GGRi~ML~~l~~i~~mL~~RM~~-I~GpniVIFVk~l~~-~~l~lL~~TFGtLP~ 191 (590)
T PF03410_consen 139 GGRIDMLNNLNDIRNMLSNRMHR-IIGPNIVIFVKELNP-NILSLLSNTFGTLPS 191 (590)
T ss_pred CchHHHHhhhHHHHHHHHHHHHh-hcCCcEEEEEeccCH-HHHHHHHHhcCCCCC
Confidence 333444544431 223333333 345677777755774 667899999999885
No 23
>PHA03081 putative metalloprotease; Provisional
Probab=97.85 E-value=0.00022 Score=70.83 Aligned_cols=185 Identities=14% Similarity=0.184 Sum_probs=112.3
Q ss_pred EEcCCCCEEEEEecCCCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHhCCEeEEeecccee
Q psy8066 67 TTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTF 146 (529)
Q Consensus 67 ~~L~NGl~v~~~~~~~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~g~~~~~~t~~~~~ 146 (529)
++|+||++|...+.-...+.+++. +.|.-.+-.+-.|+||++||.+-. |.+. .+ ..|++|.+.+.
T Consensus 2 i~~~ngvr~f~~~~m~kdiy~gi~-~fgfe~di~~~lg~ahllehili~----fd~~-~f---------~anast~r~ym 66 (595)
T PHA03081 2 IVLSNGVRIFINPSMKKDIYLGIS-NFGFENDIGEILGIAHLLEHILIS----FDSS-KF---------VANASTARSYM 66 (595)
T ss_pred eEecCceEEEecCccccceEEeec-ccccccchHHHHhHHHHHHHHeee----cchH-Hh---------cccchhhhhhH
Confidence 579999999998876666777765 677777777889999999999854 3221 11 13788888888
Q ss_pred EEEEEeCCC-CHHHHHHHHHHhhcCCCCCHHHHHHHH-HHHHHHHHH-hhcCCChHHHHHHHHHHhccCCCCCCCCCCCC
Q psy8066 147 IYAASAATS-GLDTVMKILGDVVLRPKFSEEEINMAR-QTIQFELEN-YQMRPEQETLLMDMIHAAAYKDNTLGLPKLCP 223 (529)
Q Consensus 147 ~~~~~~~~~-~l~~~l~ll~~~l~~p~f~~~~~~~~k-~~~~~el~~-~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~g~ 223 (529)
.|-+.+.+. ...+++.-+..+++.+.--...|...+ +.-+.|+++ ..-+.. .-.+++.+.-+ .++.-|. .|.
T Consensus 67 sfwc~sirg~~y~DAvrtliSWFF~~~~Lr~~F~~~~ik~~ikELENEYYFRnE-vfHCmDvLTfL-~gGDLYN---GGR 141 (595)
T PHA03081 67 SFWCKSIRGRSYIDAIRTLISWFFDNGKLKDNFSLSKIRNHIKELENEYYFRNE-VFHCMDVLTFL-GGGDLYN---GGR 141 (595)
T ss_pred hHhhHhhcCCchHHHHHHHHHHhccCCccccccchhhHHHHHHHHhhhhhhhhh-hHHHHHHHHHh-cCCcccC---Cch
Confidence 887766543 345677777777766643333333332 223334442 111111 34666666433 3343443 333
Q ss_pred ccccCCCCH--HHHHHHHHhhccCCCeEEEEecCCHHHHHHHHHhhhccCCC
Q psy8066 224 PASIGVINN--NTLFTYLKNYYTPTRMVVAGIGVEHEALVEAANKYFVDKQP 273 (529)
Q Consensus 224 ~~~l~~it~--~~l~~f~~~~~~~~~~~l~i~G~~~~~l~~~~~~~f~~l~~ 273 (529)
...|++++. +-|.+-.++ ....|++++|--+++ .+..+++..||.+|.
T Consensus 142 i~ML~~l~~i~~~L~~RM~~-I~GpniVIFVk~ln~-~~l~lL~~TFGtLP~ 191 (595)
T PHA03081 142 IDMLDNLNDVRDMLSNRMHR-ISGPNIVIFVKELNP-NTLSLLNNTFGTLPS 191 (595)
T ss_pred HHHHhhhHHHHHHHHHHHHh-hcCCcEEEEEeccCH-HHHHHHHHhcCCCCC
Confidence 455554431 222222222 345677777755775 567899999999985
No 24
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=97.84 E-value=0.001 Score=72.05 Aligned_cols=166 Identities=16% Similarity=0.163 Sum_probs=107.7
Q ss_pred CceeEEEEecCCCCCCC-C-cHHHHHHHHhhcCCCCCCCCCCCCCcccH-HHHHHhhhcCceEEEeeeccccCccceEEE
Q psy8066 318 ELSHVVIGLEGVSHQDP-D-FVPACVLNILMGGGGSFSAGGPGKGMYTR-LYTNVLNRHHWMFSATAYNHAYADTGLFCI 394 (529)
Q Consensus 318 ~~~~v~~~~~~~~~~~~-~-~~~~~vl~~iLg~~~~f~~~~~~~g~~sr-L~~~lR~~~gl~Y~v~a~~~~~~~~g~~~i 394 (529)
+...+.+.+...+..++ + .-...++.++|..|+. .+... =+.+..++.|..+++++.. -...+
T Consensus 20 p~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~--------~~~~~~~i~~~le~lGG~lNA~Ts~------d~T~y 85 (696)
T TIGR02110 20 KRAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGGE--------RFQGDDRLMPWVQRQGGQVNATTLE------RTTAF 85 (696)
T ss_pred CEEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCCC--------CCCcHHHHHHHHHHhCCeEEEEEcC------CeEEE
Confidence 34667777775554443 2 3345677777764421 22232 2344456677777666543 23345
Q ss_pred EEEeCCCCHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHhcCCC-C-ChhHHHHHh
Q psy8066 395 HASAPPSNVKNIVDVLVKELVTMAGP-IDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGHR-K-RPSTYIESI 471 (529)
Q Consensus 395 ~~~~~~~~~~~~i~~i~~~l~~l~~~-it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~-~~~~~~~~i 471 (529)
++.+.+++.+++++.+.+.+ .++ ++++++++.|..++.++....+++..++.......+..+.+ . ...-..+.|
T Consensus 86 ~~~v~~~~l~~aL~lLaD~l---~~P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt~esL 162 (696)
T TIGR02110 86 FFELPAAALAAGLARLCDML---ARPLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGSRDSL 162 (696)
T ss_pred EEEecHHHHHHHHHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 56677788888887776555 344 99999999999999999998888877766655554432321 1 111223444
Q ss_pred cc---CCHHHHHHHHHHhccC-CCeEEEEcCCC
Q psy8066 472 EN---VTEDDIRRVASRLLTS-QPSVAARGELI 500 (529)
Q Consensus 472 ~~---vT~edi~~~a~~~l~~-~~~~~vvG~~~ 500 (529)
++ +|.+||+++.++++.+ +..++|+||.+
T Consensus 163 ~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdvs 195 (696)
T TIGR02110 163 ALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQS 195 (696)
T ss_pred hCcccchHHHHHHHHHHhcchhcEEEEEEeCCC
Confidence 54 5599999999999987 57789999964
No 25
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=97.83 E-value=0.00038 Score=72.60 Aligned_cols=177 Identities=16% Similarity=0.144 Sum_probs=119.6
Q ss_pred eeEEEEecCCCCC--CCCcHHHHHHHHhhcCCCCCCCCCCCCCccc-HHHHHHhhhcCceEEEeeeccccCccceEEEEE
Q psy8066 320 SHVVIGLEGVSHQ--DPDFVPACVLNILMGGGGSFSAGGPGKGMYT-RLYTNVLNRHHWMFSATAYNHAYADTGLFCIHA 396 (529)
Q Consensus 320 ~~v~~~~~~~~~~--~~~~~~~~vl~~iLg~~~~f~~~~~~~g~~s-rL~~~lR~~~gl~Y~v~a~~~~~~~~g~~~i~~ 396 (529)
..+.+.+...... ....-...+|.+++..|.. +..+ -+.+. -++.|....++.++. ...+. +
T Consensus 39 vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~--------~~~~~~i~~~-~~~~G~~~na~ts~d----~t~y~--~ 103 (438)
T COG0612 39 VSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTT--------GLPSAELAEA-FEKLGGQLNAFTSFD----YTVYY--L 103 (438)
T ss_pred EEEEEEEeecccCCCCCcccHHHHHHHHHccCCC--------CCChHHHHHH-HHHhcCeeeccccch----hhhhh--h
Confidence 4555555522222 2233456788888864421 1111 35544 344565554444332 11222 2
Q ss_pred EeCCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHhcCCC--CChhHHHHHhccC
Q psy8066 397 SAPPSNVKNIVDVLVKELVTMAGPIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGHR--KRPSTYIESIENV 474 (529)
Q Consensus 397 ~~~~~~~~~~i~~i~~~l~~l~~~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~i~~v 474 (529)
.+.+++.+++++.+.+.+.+- .|++++|++.|..++..+.+..+++...+.......+..+.+ ..+.-..+.|.++
T Consensus 104 ~~l~~~~~~~l~llad~l~~p--~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~~G~~e~I~~i 181 (438)
T COG0612 104 SVLPDNLDKALDLLADILLNP--TFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGTEESIEAI 181 (438)
T ss_pred hhchhhhHHHHHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCCCCCHHHHHhC
Confidence 246788899888887777432 399999999999999999999999988777776666644333 2234457999999
Q ss_pred CHHHHHHHHHHhccC-CCeEEEEcCCCCCCCHHHHHHHhh
Q psy8066 475 TEDDIRRVASRLLTS-QPSVAARGELINFPSYEDIHSGIQ 513 (529)
Q Consensus 475 T~edi~~~a~~~l~~-~~~~~vvG~~~~~p~~~~~~~~~~ 513 (529)
|++|+++++++|+.+ +..++++||...---.+.+.+.|+
T Consensus 182 t~~dl~~f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~ 221 (438)
T COG0612 182 TREDLKDFYQKWYQPDNMVLVVVGDVDAEEVVELIEKYFG 221 (438)
T ss_pred CHHHHHHHHHHhcCcCceEEEEecCCCHHHHHHHHHHHHc
Confidence 999999999999998 588999999887666777777777
No 26
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=97.32 E-value=0.0091 Score=56.93 Aligned_cols=106 Identities=13% Similarity=0.193 Sum_probs=75.6
Q ss_pred CCCCEEEEEecC-CCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHHHhCCEeEEee----cc-
Q psy8066 70 PNGLRVASENRF-GSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLS----SR- 143 (529)
Q Consensus 70 ~NGl~v~~~~~~-~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~~~g~~~~~~t----~~- 143 (529)
.+|.+|+..+.+ ...+++.+.++.+...+ .+..-+.-|..-+...||.++ +..++...+..+-|.+++++ +.
T Consensus 76 ~~~~~v~~~~~~TnGI~Y~~l~fdl~~l~~-e~l~yl~Ll~~ll~~lgT~~~-sy~el~~~i~~~tGGis~~~~~~~~~~ 153 (248)
T PF08367_consen 76 LGGIPVLFHEQPTNGIVYVRLYFDLSDLPE-EDLPYLPLLTDLLGELGTKNY-SYEELSNEIDLYTGGISFSIEVYTDYD 153 (248)
T ss_dssp CTTCEEEEEE---TTEEEEEEEEE-TTS-C-CCHCCHHHHHHHCCCS-BSSS--HHHHHHHHHHHSSEEEEEEEEEEEEC
T ss_pred cCCccEEEEEcCCCCeEEEEEEecCCCCCH-HHHHhHHHHHHHHHhCCCCCC-CHHHHHHHHHHhCCCeEEEeeeccCCC
Confidence 478999976654 47899999999986543 334556655554456689987 78899999999866555543 22
Q ss_pred ------ceeEEEEEeCCCCHHHHHHHHHHhhcCCCCCHHH
Q psy8066 144 ------DTFIYAASAATSGLDTVMKILGDVVLRPKFSEEE 177 (529)
Q Consensus 144 ------~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~ 177 (529)
-.+.+++++..++++++++++.+++.++.|++.+
T Consensus 154 ~~~~~~~~l~is~k~L~~~~~~~~~ll~eil~~~~f~d~~ 193 (248)
T PF08367_consen 154 DDDKYRPYLVISAKCLDEKLDEAFELLSEILTETDFDDKE 193 (248)
T ss_dssp TECCCEEEEEEEEEEEGGGHHHHHHHHHHHHHCB-TT-HH
T ss_pred CccceeEEEEEEEEeHhhhHHHHHHHHHHHHhccCCCcHH
Confidence 1578899999999999999999999999998763
No 27
>KOG0960|consensus
Probab=96.04 E-value=0.16 Score=50.07 Aligned_cols=176 Identities=11% Similarity=0.121 Sum_probs=114.9
Q ss_pred CCEEEEEecCCCeeEEEEEEecCCCCCCCCCCCHHHHHHHhh------hc-CCCCCCCHHHHHHHHHHhC-----CEeE-
Q psy8066 72 GLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLA------FN-STSEYVNKDAIAQSLEKIG-----GICD- 138 (529)
Q Consensus 72 Gl~v~~~~~~~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~------~~-gt~~~~~~~~l~~~l~~~g-----~~~~- 138 (529)
|-.|-..++..|...+.+.|.+-+...|+. ++-++...+ +. |+.+.+ ..|.+.+.... -++|
T Consensus 258 gsEvR~rdd~lP~a~~AiAVEG~~w~~pD~---~~l~van~iiG~wdr~~g~g~~~~--s~La~~~~~~~l~~sfqsFnt 332 (467)
T KOG0960|consen 258 GSEVRVRDDDLPLAHIAIAVEGVSWAHPDY---FALMVANTIIGNWDRTEGGGRNLS--SRLAQKIQQDQLCHSFQSFNT 332 (467)
T ss_pred CceeeecCCCCchhheeeeEecCCcCCccH---HHHHHHHHHhhhhhcccCCccCCc--cHHHHHHHHHHHHHHHhhhhc
Confidence 667778888889999999998877666542 344443332 22 333333 35555554432 1233
Q ss_pred EeeccceeEEEEEe-CCCCHHHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhccCCCC
Q psy8066 139 CLSSRDTFIYAASA-ATSGLDTVMKILGDVVL--RPKFSEEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNT 215 (529)
Q Consensus 139 ~~t~~~~~~~~~~~-~~~~l~~~l~ll~~~l~--~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~l~~~~~ 215 (529)
+|.+..-.++++-+ ....++.++..+..-+. ....++.+++++|..+...+-...+.. ...+.+.-++.++.+..
T Consensus 333 ~YkDTGLwG~y~V~~~~~~iddl~~~vl~eW~rL~~~vteaEV~RAKn~Lkt~Lll~ldgt--tpi~ediGrqlL~~Grr 410 (467)
T KOG0960|consen 333 SYKDTGLWGIYFVTDNLTMIDDLIHSVLKEWMRLATSVTEAEVERAKNQLKTNLLLSLDGT--TPIAEDIGRQLLTYGRR 410 (467)
T ss_pred ccccccceeEEEEecChhhHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCC--CchHHHHHHHHhhcCCc
Confidence 23333345556666 55666766665544332 337899999999999988877554433 34788877777775533
Q ss_pred CCCCCCCCccccCCCCHHHHHHHHHhhccCCCeEEEEec-CC
Q psy8066 216 LGLPKLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VE 256 (529)
Q Consensus 216 ~~~~~~g~~~~l~~it~~~l~~f~~~~~~~~~~~l~i~G-~~ 256 (529)
... ---.+.|++++.++++++-.+++....+.++.+| +.
T Consensus 411 i~l--~El~~rId~vt~~~Vr~va~k~iyd~~iAia~vG~ie 450 (467)
T KOG0960|consen 411 IPL--AELEARIDAVTAKDVREVASKYIYDKDIAIAAVGPIE 450 (467)
T ss_pred CCh--HHHHHHHhhccHHHHHHHHHHHhhcCCcceeeecccc
Confidence 222 1225678999999999999999998899999999 75
No 28
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=95.99 E-value=0.35 Score=41.90 Aligned_cols=125 Identities=16% Similarity=0.125 Sum_probs=80.4
Q ss_pred CceeEEEEecCCCCCCC-C-cHHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceEEEeeeccccCccceEEEE
Q psy8066 318 ELSHVVIGLEGVSHQDP-D-FVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIH 395 (529)
Q Consensus 318 ~~~~v~~~~~~~~~~~~-~-~~~~~vl~~iLg~~~~f~~~~~~~g~~srL~~~lR~~~gl~Y~v~a~~~~~~~~g~~~i~ 395 (529)
+...+.+.+.+....++ + .-...++..++..++ ++..+.-..+..++.|..+++... .....++
T Consensus 11 ~~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs--------~~~~~~~l~~~l~~~G~~~~~~t~------~d~t~~~ 76 (149)
T PF00675_consen 11 PVVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGS--------KKYSSDELQEELESLGASFNASTS------RDSTSYS 76 (149)
T ss_dssp SEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBB--------SSSBHHHHHHHHHHTTCEEEEEEE------SSEEEEE
T ss_pred CEEEEEEEEeeccCCCCCCCCchhhhhhhhccccc--------chhhhhhhHHHhhhhccccceEec------ccceEEE
Confidence 45778888886554333 3 234566767665432 122233333445566888766654 2345566
Q ss_pred EEeCCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHhc
Q psy8066 396 ASAPPSNVKNIVDVLVKELVTMAGPIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLAT 458 (529)
Q Consensus 396 ~~~~~~~~~~~i~~i~~~l~~l~~~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 458 (529)
+.+.+++.+.+++.+.+.+..- .++++++++.|..++..+....+++...+.......+..
T Consensus 77 ~~~~~~~~~~~l~~l~~~~~~P--~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~ 137 (149)
T PF00675_consen 77 ASVLSEDLEKALELLADMLFNP--SFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFR 137 (149)
T ss_dssp EEEEGGGHHHHHHHHHHHHHSB--GGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHT
T ss_pred EEEecccchhHHHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhc
Confidence 6777888888888887666432 399999999999999999988888766655555554433
No 29
>KOG2067|consensus
Probab=93.91 E-value=0.67 Score=45.87 Aligned_cols=162 Identities=12% Similarity=0.108 Sum_probs=100.3
Q ss_pred CeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHH---------HHHH------HHHHhCCEeEEeeccceeE
Q psy8066 83 SFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKD---------AIAQ------SLEKIGGICDCLSSRDTFI 147 (529)
Q Consensus 83 ~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~---------~l~~------~l~~~g~~~~~~t~~~~~~ 147 (529)
...++.+-+.+-+..+++ -++-.+-.|+..|++.| |+. -+.+ +++.+-+.-+.+.+.--++
T Consensus 263 EltHv~lg~Eg~~~~deD---~v~~avLq~lmGGGGSF-SAGGPGKGMySrLY~~vLNry~wv~sctAfnhsy~DtGlfg 338 (472)
T KOG2067|consen 263 ELTHVVLGFEGCSWNDED---FVALAVLQMLMGGGGSF-SAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHSYSDTGLFG 338 (472)
T ss_pred ceeeeeEeeccCCCCChh---HHHHHHHHHHhcCCccc-CCCCCCcchHHHHHHHHHhhhHHHHHhhhhhccccCCceeE
Confidence 345666666666665552 23444445555666655 321 1222 2333334455667777789
Q ss_pred EEEEeCCCCHHHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHh-hcCCChHHHHHHHHHHhccCCCCCCCCCCCCc
Q psy8066 148 YAASAATSGLDTVMKILGDVVL--RPKFSEEEINMARQTIQFELENY-QMRPEQETLLMDMIHAAAYKDNTLGLPKLCPP 224 (529)
Q Consensus 148 ~~~~~~~~~l~~~l~ll~~~l~--~p~f~~~~~~~~k~~~~~el~~~-~~~p~~~~~~~~~l~~~l~~~~~~~~~~~g~~ 224 (529)
++++++++...++++++..-+. .-..++++++++|.++...+-++ +.+| -.+.+.-++.+-.+. .. +.---.
T Consensus 339 i~~s~~P~~a~~aveli~~e~~~~~~~v~~~el~RAK~qlkS~LlMNLESR~---V~~EDvGRQVL~~g~-rk-~p~e~~ 413 (472)
T KOG2067|consen 339 IYASAPPQAANDAVELIAKEMINMAGGVTQEELERAKTQLKSMLLMNLESRP---VAFEDVGRQVLTTGE-RK-PPDEFI 413 (472)
T ss_pred EeccCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccccc---hhHHHHhHHHHhccC-cC-CHHHHH
Confidence 9999999999999999987663 33588999999999998887754 4444 244444444433221 11 111124
Q ss_pred cccCCCCHHHHHHHHHhhccCCCeEEEEec
Q psy8066 225 ASIGVINNNTLFTYLKNYYTPTRMVVAGIG 254 (529)
Q Consensus 225 ~~l~~it~~~l~~f~~~~~~~~~~~l~i~G 254 (529)
+.|++++.+|+.++-.+.++. +.++...|
T Consensus 414 ~~Ie~lt~~DI~rva~kvlt~-~p~va~~G 442 (472)
T KOG2067|consen 414 KKIEQLTPSDISRVASKVLTG-KPSVAAFG 442 (472)
T ss_pred HHHHhcCHHHHHHHHHHHhcC-CceeccCC
Confidence 678899999999999998863 44444455
No 30
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=83.36 E-value=11 Score=33.01 Aligned_cols=108 Identities=19% Similarity=0.181 Sum_probs=65.5
Q ss_pred CCEEEEEecCCCeeEEEEEEecCCCCCCCCCCCHHHHHHHhhhcCCCCCCCHHHHHHHHH-HhCCE--eEEeec--c--c
Q psy8066 72 GLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLE-KIGGI--CDCLSS--R--D 144 (529)
Q Consensus 72 Gl~v~~~~~~~~~~~~~l~v~~G~~~e~~~~~Gla~lle~l~~~gt~~~~~~~~l~~~l~-~~g~~--~~~~t~--~--~ 144 (529)
+-.++..+.+.+...+.+.+.+..... ........++.+++..+.. ..+...+. +.|.. ++++.. . .
T Consensus 67 ~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~-----s~l~~~lr~~~~l~y~v~~~~~~~~~~~ 140 (184)
T PF05193_consen 67 GKEIVIPSKDESQSIVSIAFPGPPIKD-SKDYFALNLLSSLLGNGMS-----SRLFQELREKQGLAYSVSASNSSYRDSG 140 (184)
T ss_dssp EEEEEEEESSSSSEEEEEEEEEEETGT-STTHHHHHHHHHHHHCSTT-----SHHHHHHHTTTTSESEEEEEEEEESSEE
T ss_pred ccccccccccccccccccccccccccc-cchhhHHHHHHHHHhcCcc-----chhHHHHHhccccceEEEeeeeccccce
Confidence 334444444436666777776665522 2345667788888876532 25677776 55533 333322 2 3
Q ss_pred eeEEEEEeCCCCHHHHHHHHHHhhc---CCCCCHHHHHHHHHHH
Q psy8066 145 TFIYAASAATSGLDTVMKILGDVVL---RPKFSEEEINMARQTI 185 (529)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~ll~~~l~---~p~f~~~~~~~~k~~~ 185 (529)
.+.+.+.+.+++++++++.+.+.+. .-.|++++|+++|+.+
T Consensus 141 ~~~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 141 LFSISFQVTPENLDEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp EEEEEEEEEGGGHHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred EEEEEEEcCcccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 4666777777788888877776663 2359999999998764
No 31
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=72.90 E-value=4.3 Score=24.63 Aligned_cols=23 Identities=22% Similarity=0.310 Sum_probs=16.9
Q ss_pred HHHHHhc-CC-CCHHHHHHHHHHHH
Q psy8066 412 KELVTMA-GP-IDADELSRAKKQLQ 434 (529)
Q Consensus 412 ~~l~~l~-~~-it~~el~~ak~~l~ 434 (529)
+.++.+. .| ||++|+++.|+.++
T Consensus 6 ~~L~~l~~~G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 6 EKLKELYDKGEISEEEYEQKKARLL 30 (31)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 3444444 36 99999999998875
No 32
>PF09186 DUF1949: Domain of unknown function (DUF1949); InterPro: IPR015269 Members of this entry are a set of functionally uncharacterised hypothetical bacterial proteins. They adopt a ferredoxin-like fold, with a beta-alpha-beta-beta-alpha-beta arrangement []. This entry contains the protein Impact, which is a translational regulator that ensures constant high levels of translation under amino acid starvation. It acts by interacting with Gcn1/Gcn1L1, thereby preventing activation of Gcn2 protein kinases (EIF2AK1 to 4) and subsequent down-regulation of protein synthesis. It is evolutionary conserved from eukaryotes to archaea []. ; PDB: 2CVE_A 1VI7_A.
Probab=64.08 E-value=44 Score=22.89 Aligned_cols=49 Identities=14% Similarity=0.122 Sum_probs=42.4
Q ss_pred CCCHHHHHHHHHHhCCEeEEeeccceeEEEEEeCCCCHHHHHHHHHHhh
Q psy8066 120 YVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVV 168 (529)
Q Consensus 120 ~~~~~~l~~~l~~~g~~~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l 168 (529)
|+....+...++.+++.+.-....+...+.+.++.+..+.+.+.|.+..
T Consensus 5 Y~~~~~v~~~l~~~~~~i~~~~y~~~V~~~v~v~~~~~~~f~~~l~~~t 53 (56)
T PF09186_consen 5 YSQYGKVERLLEQNGIEIVDEDYTDDVTLTVAVPEEEVEEFKAQLTDLT 53 (56)
T ss_dssp CCCHHHHHHHHHHTTTEEEEEEECTTEEEEEEEECCCHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHCCCEEEcceecceEEEEEEECHHHHHHHHHHHHHHc
Confidence 5566789999999999987777777899999999999999999998764
No 33
>KOG1374|consensus
Probab=57.22 E-value=1e+02 Score=30.85 Aligned_cols=158 Identities=16% Similarity=0.179 Sum_probs=82.5
Q ss_pred CCCCCCCcccHHHHHHhhhcC----ceEEEeeeccccCc------cceEEEE-EEeCCCC----HHHHHHHHHHHHHHhc
Q psy8066 354 AGGPGKGMYTRLYTNVLNRHH----WMFSATAYNHAYAD------TGLFCIH-ASAPPSN----VKNIVDVLVKELVTMA 418 (529)
Q Consensus 354 ~~~~~~g~~srL~~~lR~~~g----l~Y~v~a~~~~~~~------~g~~~i~-~~~~~~~----~~~~i~~i~~~l~~l~ 418 (529)
+||.|.||.|.|.++|++... -+|+|+.......+ ..++++. ...+++. --.++..|....-++.
T Consensus 142 AGGTGSGlGS~llErL~drypkkliqtysVfPn~d~ssdVVVQpYNsiLtL~rL~~nsD~vVVlDN~AL~ria~~~l~i~ 221 (448)
T KOG1374|consen 142 AGGTGSGLGSFLLERLNDRYPKKLVQTYSVFPNQDESSDVVVQPYNSILTLKRLTENSDCVVVLDNTALHRIAADRLHIQ 221 (448)
T ss_pred cCCCCcchHHHHHHHHHHhchhhhheeeeeccCCCCccceEEecchHHHHHHHHhhCCCeEEEeccHHHHHHHHHHhcCC
Confidence 488899999999999987543 57877654321111 1111100 0011110 0123333332222222
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHhc-----------CCCCChhHHHHHhccCCHHHHHHHHHHhc
Q psy8066 419 GPIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLAT-----------GHRKRPSTYIESIENVTEDDIRRVASRLL 487 (529)
Q Consensus 419 ~~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~i~~vT~edi~~~a~~~l 487 (529)
.+|=..++.....+.+.-......+.++...+....... +......+..... +++..-+..+.+++|
T Consensus 222 -~ptF~~iNqLvstims~st~t~r~p~Ym~n~l~~l~~~LiP~P~lhfl~~~~tP~~sd~~~~~-~~rkttvldvmRrLL 299 (448)
T KOG1374|consen 222 -NPTFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLYASLIPTPELHFLMTGYTPLTSDNSLAT-AVRKTTVLDVMRRLL 299 (448)
T ss_pred -CCCHHHHHHHHHHHHhhccccccchhhccCcHHHHHhhcCCCCCeeeeeccCCcccChhhhhh-hhhcchHHHHHHHHh
Confidence 366566666666666555555555655554444322211 1100111222222 577777888899999
Q ss_pred cCCCeEEEEcC-CCCCCCHHHHHHHhh
Q psy8066 488 TSQPSVAARGE-LINFPSYEDIHSGIQ 513 (529)
Q Consensus 488 ~~~~~~~vvG~-~~~~p~~~~~~~~~~ 513 (529)
.++..++-.++ ....|-+-.|-..++
T Consensus 300 ~pkn~mvs~~~~~~~~~~~~si~n~iq 326 (448)
T KOG1374|consen 300 QPKNMMVSTADDLSGNPCYISILNIIQ 326 (448)
T ss_pred CcchhhhhccccccCCcchHhHHhhhh
Confidence 99888777766 555666666555554
No 34
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=51.57 E-value=2.2e+02 Score=26.94 Aligned_cols=113 Identities=17% Similarity=0.139 Sum_probs=67.5
Q ss_pred CceeEEEEecCCCCCCCCcHHHHHHHHhhcCCCCCCCCCCCCCcc-cHHHHHHhhhcC-ceEEEeeeccc---cCccceE
Q psy8066 318 ELSHVVIGLEGVSHQDPDFVPACVLNILMGGGGSFSAGGPGKGMY-TRLYTNVLNRHH-WMFSATAYNHA---YADTGLF 392 (529)
Q Consensus 318 ~~~~v~~~~~~~~~~~~~~~~~~vl~~iLg~~~~f~~~~~~~g~~-srL~~~lR~~~g-l~Y~v~a~~~~---~~~~g~~ 392 (529)
.-+++.+.|+....+.++..-+.++..+|+.-+. + .+. ..|-..+...-| +..++.+.... ......|
T Consensus 90 GI~Y~~l~fdl~~l~~e~l~yl~Ll~~ll~~lgT------~-~~sy~el~~~i~~~tGGis~~~~~~~~~~~~~~~~~~l 162 (248)
T PF08367_consen 90 GIVYVRLYFDLSDLPEEDLPYLPLLTDLLGELGT------K-NYSYEELSNEIDLYTGGISFSIEVYTDYDDDDKYRPYL 162 (248)
T ss_dssp TEEEEEEEEE-TTS-CCCHCCHHHHHHHCCCS-B------S-SS-HHHHHHHHHHHSSEEEEEEEEEEEECTECCCEEEE
T ss_pred CeEEEEEEecCCCCCHHHHHhHHHHHHHHHhCCC------C-CCCHHHHHHHHHHhCCCeEEEeeeccCCCCccceeEEE
Confidence 5689999999888888888889999999985321 1 111 234333433333 33333332222 2234677
Q ss_pred EEEEEeCCCCHHHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHHHHH
Q psy8066 393 CIHASAPPSNVKNIVDVLVKELVTMAGPIDAD-ELSRAKKQLQSMLLM 439 (529)
Q Consensus 393 ~i~~~~~~~~~~~~i~~i~~~l~~l~~~it~~-el~~ak~~l~~~~~~ 439 (529)
.+.+.|-.++++++++.+.+.+.+. .+++. .+..........+..
T Consensus 163 ~is~k~L~~~~~~~~~ll~eil~~~--~f~d~~rl~~ll~~~~s~~~~ 208 (248)
T PF08367_consen 163 VISAKCLDEKLDEAFELLSEILTET--DFDDKERLKELLKELKSDMES 208 (248)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHCB---TT-HHHHHHHHHHHHHHHHH
T ss_pred EEEEEeHhhhHHHHHHHHHHHHhcc--CCCcHHHHHHHHHHHHHHHHH
Confidence 8888899999999999998888653 36654 344444444444433
No 35
>COG5023 Tubulin [Cytoskeleton]
Probab=44.79 E-value=2.6e+02 Score=28.09 Aligned_cols=134 Identities=13% Similarity=0.121 Sum_probs=75.3
Q ss_pred CCCCCCCcccHHHHHHhhhcC----ceEEEeeecc-------ccCccceEEE---------EEEeCCCCHHHHHHHHHHH
Q psy8066 354 AGGPGKGMYTRLYTNVLNRHH----WMFSATAYNH-------AYADTGLFCI---------HASAPPSNVKNIVDVLVKE 413 (529)
Q Consensus 354 ~~~~~~g~~srL~~~lR~~~g----l~Y~v~a~~~-------~~~~~g~~~i---------~~~~~~~~~~~~i~~i~~~ 413 (529)
+||.|.||.+-|...||++.+ +.|+|+.... +| ...+.+ .+..+.+ ...+...
T Consensus 140 gGGTGSG~GslLLerl~~eypkK~~~tfSV~P~p~~Sd~VVePY--NsvLt~h~l~ensD~tf~~DNe---al~di~~-- 212 (443)
T COG5023 140 GGGTGSGLGSLLLERLREEYPKKIKLTFSVFPAPKVSDVVVEPY--NSVLTLHRLLENSDCTFVVDNE---ALYDICR-- 212 (443)
T ss_pred cCcCcccHHHHHHHHHHHhcchhheeEEEeccCCccCcceeccc--HHHHHHHHHHhcCCceEEechH---HHHHHHH--
Confidence 367799999999999998765 6777764211 11 111111 0111221 1222222
Q ss_pred HHHhcC-CCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHhcCCC-----------CChhHHHHHhccCCHHHHHH
Q psy8066 414 LVTMAG-PIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGHR-----------KRPSTYIESIENVTEDDIRR 481 (529)
Q Consensus 414 l~~l~~-~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----------~~~~~~~~~i~~vT~edi~~ 481 (529)
+.++. .++=+.+++....+.+.......=+.++-.++.......-.. .....-.+..++.|..|
T Consensus 213 -~~L~i~~P~y~~lN~LIs~VmSsvTtslRfpG~ln~dl~~~~~nLVP~PrlHF~l~sytP~~s~~~~~~~~~sv~e--- 288 (443)
T COG5023 213 -RNLRIQNPSYDDLNQLISTVMSSVTTSLRFPGYLNVDLRSIQTNLVPYPRLHFPLVSYTPFTSDGSAAHEKNSVSE--- 288 (443)
T ss_pred -HhcCCCCCChHHHHHHHHHHHHhhhheeecCccccchHHHHHhcCCCCCcccccccccCcccchhhHHHhcccHHH---
Confidence 23333 477788999999888888777776766655554332211110 01122345566666555
Q ss_pred HHHHhccCCCeEEEEcC
Q psy8066 482 VASRLLTSQPSVAARGE 498 (529)
Q Consensus 482 ~a~~~l~~~~~~~vvG~ 498 (529)
+.+++|.++..++..-+
T Consensus 289 vt~~~f~p~N~mv~~dp 305 (443)
T COG5023 289 VTNQLFDPKNQMVSCDP 305 (443)
T ss_pred HHHHHhCcccceeeecC
Confidence 56788888777776655
No 36
>KOG2583|consensus
Probab=33.23 E-value=5.4e+02 Score=26.21 Aligned_cols=162 Identities=11% Similarity=0.123 Sum_probs=87.6
Q ss_pred ceeEEEEecCCCCCCC-Cc-HHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceEEEeeeccccCccceEEEEE
Q psy8066 319 LSHVVIGLEGVSHQDP-DF-VPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIHA 396 (529)
Q Consensus 319 ~~~v~~~~~~~~~~~~-~~-~~~~vl~~iLg~~~~f~~~~~~~g~~srL~~~lR~~~gl~Y~v~a~~~~~~~~g~~~i~~ 396 (529)
-+.+.+.|..-+.-.+ +. -...+|+..-+.... . ..=++-+|+-+.+.=...+ ..+.-.|++.+
T Consensus 43 is~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq---~-------~sal~ivr~se~~GG~Lss----~~tRe~~~~tv 108 (429)
T KOG2583|consen 43 ISSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQ---E-------RSALKIVRESEQLGGTLSS----TATRELIGLTV 108 (429)
T ss_pred ceEEEEEEecCccCCccccccHHHHHHHhcccCcc---c-------cchhhhhhhhHhhCceeee----eeecceEEEEE
Confidence 4788999986554333 32 334566555443211 0 1112334654433322222 23355778888
Q ss_pred EeCCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHhccChHHH-HHHHHHHHHhcCCCCChhHHHHHhccC
Q psy8066 397 SAPPSNVKNIVDVLVKELVTMAGPIDADELSRAK-KQLQSMLLMNLEARPAV-FEDVGRQVLATGHRKRPSTYIESIENV 474 (529)
Q Consensus 397 ~~~~~~~~~~i~~i~~~l~~l~~~it~~el~~ak-~~l~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~i~~v 474 (529)
.+..++++-.+..+.+.... ..|..+|++... ..+..++ ..+++... ++++-......+.-....--.-.+.++
T Consensus 109 t~lrd~~~~~l~~L~~V~~~--paFkPwEl~D~~~~ti~~~l--~~~t~~~~a~e~lH~aAfRngLgnslY~p~~~vg~v 184 (429)
T KOG2583|consen 109 TFLRDDLEYYLSLLGDVLDA--PAFKPWELEDVVLATIDADL--AYQTPYTIAIEQLHAAAFRNGLGNSLYSPGYQVGSV 184 (429)
T ss_pred EEecccHHHHHHHHHHhhcc--cCcCchhhhhhhhhhhHHHh--hhcChHHHHHHHHHHHHHhcccCCcccCCcccccCc
Confidence 88888777665555444321 148888888777 4444443 33455443 344433322222211111112368999
Q ss_pred CHHHHHHHHHHhccC-CCeEEEEcC
Q psy8066 475 TEDDIRRVASRLLTS-QPSVAARGE 498 (529)
Q Consensus 475 T~edi~~~a~~~l~~-~~~~~vvG~ 498 (529)
+.+||..++.+.|.. +..++-+|.
T Consensus 185 ss~eL~~Fa~k~fv~gn~~lvg~nv 209 (429)
T KOG2583|consen 185 SSSELKDFAAKHFVKGNAVLVGVNV 209 (429)
T ss_pred cHHHHHHHHHHHhhccceEEEecCC
Confidence 999999999999874 555555553
No 37
>cd04922 ACT_AKi-HSDH-ThrA_2 ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). This CD includes the second of two ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). The ACT domains are positioned between the N-terminal catalytic domain of AK and the C-terminal HSDH domain found in bacteria (Escherichia coli (EC) ThrA) and higher plants (Zea mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. HSDH is the first committed reaction in the branch of the pathway that leads to Thr and Met. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathwa
Probab=26.25 E-value=1.7e+02 Score=20.37 Aligned_cols=46 Identities=7% Similarity=0.051 Sum_probs=34.1
Q ss_pred HHHHHHHHHhCCEeEEee-ccceeEEEEEeCCCCHHHHHHHHHHhhc
Q psy8066 124 DAIAQSLEKIGGICDCLS-SRDTFIYAASAATSGLDTVMKILGDVVL 169 (529)
Q Consensus 124 ~~l~~~l~~~g~~~~~~t-~~~~~~~~~~~~~~~l~~~l~ll~~~l~ 169 (529)
..+.+.|.+.|..+.... +.....+++.+..++.+.+++.|.+.+.
T Consensus 19 ~~i~~~l~~~~I~v~~i~~~~s~~~is~~v~~~~~~~~~~~lh~~~~ 65 (66)
T cd04922 19 ATFFSALAKANVNIRAIAQGSSERNISAVIDEDDATKALRAVHERFF 65 (66)
T ss_pred HHHHHHHHHCCCCEEEEEecCcccEEEEEEeHHHHHHHHHHHHHHHh
Confidence 356677778887765443 2345888899999999999999888764
No 38
>PF13840 ACT_7: ACT domain ; PDB: 3S1T_A 1ZHV_A 3AB4_K 3AB2_O 2DTJ_A 3AAW_A 2RE1_B 3MAH_A 1ZVP_D.
Probab=25.68 E-value=1.9e+02 Score=20.76 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=29.4
Q ss_pred HHHHHHHHhCCEeEEeeccceeEEEEEeCCCCHHHHHHHHHH
Q psy8066 125 AIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGD 166 (529)
Q Consensus 125 ~l~~~l~~~g~~~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~ 166 (529)
.+...|...|.++...+ .....++-++.++++++++.|.+
T Consensus 26 ~i~~~La~~~I~i~~is--S~~~~~ilV~~~~~~~A~~~L~~ 65 (65)
T PF13840_consen 26 KIFSALAEAGINIFMIS--SEISISILVKEEDLEKAVEALHE 65 (65)
T ss_dssp HHHHHHHHTTS-ECEEE--ESSEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEE--EeeeEEEEEeHHHHHHHHHHhcC
Confidence 45556677788876665 56677788889999999998864
No 39
>COG1761 RPB11 DNA-directed RNA polymerase, subunit L [Transcription]
Probab=24.91 E-value=1.5e+02 Score=23.61 Aligned_cols=53 Identities=17% Similarity=0.186 Sum_probs=22.9
Q ss_pred HHHHHHhhhcCceEEEeeeccccCccceEEEEEEeCCC-C----HHHHHHHHHHHHHHhc
Q psy8066 364 RLYTNVLNRHHWMFSATAYNHAYADTGLFCIHASAPPS-N----VKNIVDVLVKELVTMA 418 (529)
Q Consensus 364 rL~~~lR~~~gl~Y~v~a~~~~~~~~g~~~i~~~~~~~-~----~~~~i~~i~~~l~~l~ 418 (529)
.|...|+++.+--+..+.--.+. .+...+++.+..+ + +.++...+.+.+..+.
T Consensus 31 lL~~~L~~d~~V~~a~Y~i~HP~--~~~~~i~Ikt~~~~dp~~aL~~A~~~i~~~~~~l~ 88 (99)
T COG1761 31 LLREELLKDEDVEFAAYSIPHPL--IDNPKIRIKTKGGVDPKEALKRAARKILKDLEELL 88 (99)
T ss_pred HHHHHHhCCCCeeEEEEeCCCCC--CCCceEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 33334445545444333333333 4455555554444 3 3444444444444443
No 40
>cd04916 ACT_AKiii-YclM-BS_2 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. B. subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from B. subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=24.17 E-value=2.1e+02 Score=19.97 Aligned_cols=46 Identities=11% Similarity=0.111 Sum_probs=33.3
Q ss_pred HHHHHHHHhCCEeEEee-ccceeEEEEEeCCCCHHHHHHHHHHhhcC
Q psy8066 125 AIAQSLEKIGGICDCLS-SRDTFIYAASAATSGLDTVMKILGDVVLR 170 (529)
Q Consensus 125 ~l~~~l~~~g~~~~~~t-~~~~~~~~~~~~~~~l~~~l~ll~~~l~~ 170 (529)
.+...|.+.|..+.... +.....+++..+.++.+.++..+.+.+.+
T Consensus 20 ~i~~~L~~~~i~v~~i~~~~s~~~isf~v~~~d~~~~~~~lh~~~~~ 66 (66)
T cd04916 20 RATAALAKAGINIRMINQGSSEISIMIGVHNEDADKAVKAIYEEFFN 66 (66)
T ss_pred HHHHHHHHCCCCEEEEEecCcccEEEEEEeHHHHHHHHHHHHHHHhC
Confidence 56666777777765443 22447788999999999999999887653
No 41
>PF06992 Phage_lambda_P: Replication protein P; InterPro: IPR009731 This family consists of several Bacteriophage lambda replication protein P like proteins. The bacteriophage lambda P protein promoters replication of the phage chromosome by recruiting a key component of the cellular replication machinery to the viral origin. Specifically, P protein delivers one or more molecules of Escherichia coli DnaB helicase to a nucleoprotein structure formed by the lambda O initiator at the lambda replication origin [].; GO: 0006270 DNA-dependent DNA replication initiation
Probab=23.19 E-value=6.3e+02 Score=23.69 Aligned_cols=88 Identities=19% Similarity=0.219 Sum_probs=54.0
Q ss_pred CCHHHHHHHHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHhcCC--CCChhHHHHHhc--
Q psy8066 401 SNVKNIVDVLVKELVTMA----GPIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGH--RKRPSTYIESIE-- 472 (529)
Q Consensus 401 ~~~~~~i~~i~~~l~~l~----~~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~i~-- 472 (529)
+.+.++++.++..|..+- ...++++++.+|...+..+..+--+.......=......... ..++-++++.-+
T Consensus 34 ~~~~~~vd~lF~~L~aifPa~~a~~~~~~~~~aKr~Wi~~f~engI~t~eQv~~Gm~~aR~~~spF~PS~GqFI~WCk~~ 113 (233)
T PF06992_consen 34 EQAAKLVDRLFRQLKAIFPAWRANPDQEELNEAKRQWIKAFAENGITTMEQVRAGMRRARASESPFWPSPGQFIAWCKPG 113 (233)
T ss_pred HHHHHHHHHHHHHHHHhCchhccCCCHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcCCCCCCChhHHHHHHhcc
Confidence 356677888887777762 136899999999999999988766554333222122222222 245555543322
Q ss_pred -----cC-CHHHHHHHHHHhcc
Q psy8066 473 -----NV-TEDDIRRVASRLLT 488 (529)
Q Consensus 473 -----~v-T~edi~~~a~~~l~ 488 (529)
.+ |.+++.+.+.+|..
T Consensus 114 ~~~~lGLP~~del~~~~~~y~~ 135 (233)
T PF06992_consen 114 DYEALGLPSVDELYQRYKRYCR 135 (233)
T ss_pred hHHhcCCCCHHHHHHHHHHHHH
Confidence 34 67777777777654
No 42
>cd04923 ACT_AK-LysC-DapG-like_2 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related domains. This CD includes the C-terminal of the two ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, as well as, the second and fourth, of four, ACT domains present in cyanobacteria AK. Also included are the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase isoenzyme AKI found in Bacilli (B. subtilis strain 168), Clostridia, and Actinobacteria bacterial species. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=23.03 E-value=2.2e+02 Score=19.51 Aligned_cols=44 Identities=9% Similarity=0.164 Sum_probs=33.7
Q ss_pred HHHHHHHHHhCCEeEEeeccceeEEEEEeCCCCHHHHHHHHHHhh
Q psy8066 124 DAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVV 168 (529)
Q Consensus 124 ~~l~~~l~~~g~~~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l 168 (529)
.++.+.|.+.+..+...... ...+++.++.++.++++..+.+.+
T Consensus 18 ~~i~~~L~~~~i~v~~i~~s-~~~is~~v~~~~~~~~~~~l~~~l 61 (63)
T cd04923 18 AKMFKALAEAGINIEMISTS-EIKISCLVDEDDAEKAVRALHEAF 61 (63)
T ss_pred HHHHHHHHHCCCCEEEEEcc-CCeEEEEEeHHHHHHHHHHHHHHh
Confidence 35777788888887766543 477888888899999988888765
No 43
>CHL00051 rps12 ribosomal protein S12
Probab=22.50 E-value=1.9e+02 Score=23.94 Aligned_cols=44 Identities=16% Similarity=0.201 Sum_probs=30.8
Q ss_pred ccCCCCCeEEEEcCCCCEEE-EEecCCC--eeEEEEEEecCCCCCCC
Q psy8066 57 VKDNDRNTQVTTLPNGLRVA-SENRFGS--FCTIGVIIDSGSRYEQP 100 (529)
Q Consensus 57 ~~~~~~~~~~~~L~NGl~v~-~~~~~~~--~~~~~l~v~~G~~~e~~ 100 (529)
++...+++-.++|+||.+|. +.|.++- .-+-.+.+.+|...|-+
T Consensus 45 PNSA~RKvarVrLsngk~v~AyIPGeGhnlqehs~VLvrGGrv~DlP 91 (123)
T CHL00051 45 PNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLP 91 (123)
T ss_pred CChhheeEEEEEccCCCEEEEEcCCCCccccccCEEEEeCCccCCCC
Confidence 46677888999999999998 5776542 22335566788776543
No 44
>cd04936 ACT_AKii-LysC-BS-like_2 ACT domains of the lysine-sensitive, aspartokinase (AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related domains. This CD includes the C-terminal of the two ACT domains of the lysine-sensitive, aspartokinase (AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis strain 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive AK isoenzymes. The B. subtilis strain 168 AKII is induced by methionine and repressed and inhibited by lysine. Although C. glutamicum is known to contain a single AK, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In corynebacteria and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regu
Probab=22.45 E-value=2.3e+02 Score=19.41 Aligned_cols=44 Identities=9% Similarity=0.159 Sum_probs=33.7
Q ss_pred HHHHHHHHHhCCEeEEeeccceeEEEEEeCCCCHHHHHHHHHHhh
Q psy8066 124 DAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVV 168 (529)
Q Consensus 124 ~~l~~~l~~~g~~~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l 168 (529)
.++...|.+.+..+...+.. ...+++.++..+.+.+++.+...+
T Consensus 18 ~~i~~~L~~~~i~v~~i~~s-~~~is~~v~~~d~~~~~~~l~~~~ 61 (63)
T cd04936 18 AKMFEALAEAGINIEMISTS-EIKISCLIDEDDAEKAVRALHEAF 61 (63)
T ss_pred HHHHHHHHHCCCcEEEEEcc-CceEEEEEeHHHHHHHHHHHHHHh
Confidence 35777788888887766543 477888889899999988888765
No 45
>TIGR02933 nifM_nitrog nitrogen fixation protein NifM. Members of this protein family, found in a subset of nitrogen-fixing bacteria, are the nitrogen fixation protein NifM. NifM, homologous to peptidyl-prolyl cis-trans isomerases, appears to be an accessory protein for NifH, the Fe protein, also called component II or dinitrogenase reductase, of nitrogenase.
Probab=22.23 E-value=4.7e+02 Score=24.83 Aligned_cols=65 Identities=11% Similarity=0.005 Sum_probs=36.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHhcCCCCChhHHHHHhccCCHHHHHHHHHHhc
Q psy8066 420 PIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGHRKRPSTYIESIENVTEDDIRRVASRLL 487 (529)
Q Consensus 420 ~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l 487 (529)
.+++++++.+...+...+...--+...+-+.+..+++.. ..........-.||.+||++++++.-
T Consensus 51 ~v~~~ev~~~~e~~~~~L~~~G~~~~~~r~~ir~~i~~~---~~~~~~~~~~i~ise~ei~~yy~~~~ 115 (256)
T TIGR02933 51 VIPPSLLEEAPQALAQALDEQALDAAERRAMLAHHLRLE---AQLACVCAQAPQPDDADVEAWYRRHA 115 (256)
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH---HHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence 489999988877676666554434333333333332211 01222233334689999999887653
No 46
>PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated
Probab=21.34 E-value=1.2e+02 Score=27.51 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=30.3
Q ss_pred CCHHHHHHHHHhhccCCCeEEEEec-CCHHHHHHHHHh
Q psy8066 230 INNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANK 266 (529)
Q Consensus 230 it~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~~~~~ 266 (529)
|+.+++.++.+. +|.++.++++| --++++.+++.-
T Consensus 133 i~~eevi~~L~~--rp~~~evVlTGR~~p~~Lie~ADl 168 (191)
T PRK05986 133 LDVEEVLEALNA--RPGMQHVVITGRGAPRELIEAADL 168 (191)
T ss_pred ccHHHHHHHHHc--CCCCCEEEEECCCCCHHHHHhCch
Confidence 788999999975 79999999999 888888887653
No 47
>cd04914 ACT_AKi-DapG-BS_1 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the N-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria, bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and
Probab=21.24 E-value=2.7e+02 Score=20.01 Aligned_cols=49 Identities=14% Similarity=0.148 Sum_probs=34.4
Q ss_pred HHHHHHHHHhCCEeEEeeccceeEEEEEeCCCCHHHHHHHHHHhhcCCCC
Q psy8066 124 DAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKF 173 (529)
Q Consensus 124 ~~l~~~l~~~g~~~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f 173 (529)
.++...|.+.|..+....-. ...+++.++..+++.+.+++.++=..|.+
T Consensus 17 a~if~~La~~~InvDmI~~~-~~~isFtv~~~d~~~~~~il~~~~~~~~~ 65 (67)
T cd04914 17 QRVFKALANAGISVDLINVS-PEEVIFTVDGEVAEKAVDILEKMGLDPSV 65 (67)
T ss_pred HHHHHHHHHcCCcEEEEEec-CCCEEEEEchhhHHHHHHHHHHcCCceEe
Confidence 45777788888876666322 12588899989999988887776655543
No 48
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=21.09 E-value=3e+02 Score=19.67 Aligned_cols=45 Identities=13% Similarity=-0.004 Sum_probs=33.3
Q ss_pred HHHHHHHHhCCEeE-EeeccceeEEEEEeCCCCHHHHHHHHHHhhc
Q psy8066 125 AIAQSLEKIGGICD-CLSSRDTFIYAASAATSGLDTVMKILGDVVL 169 (529)
Q Consensus 125 ~l~~~l~~~g~~~~-~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~ 169 (529)
.+.+.|...|..+. ..++.....+++-++.++.+++++.|.+.+.
T Consensus 20 ki~~~L~~~~I~v~~i~~~~s~~~is~~V~~~~~~~av~~Lh~~f~ 65 (66)
T cd04915 20 RGLAALAEAGIEPIAAHQSMRNVDVQFVVDRDDYDNAIKALHAALV 65 (66)
T ss_pred HHHHHHHHCCCCEEEEEecCCeeEEEEEEEHHHHHHHHHHHHHHHh
Confidence 44555666677643 4445567889999999999999999998764
No 49
>cd04919 ACT_AK-Hom3_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase (AK) HOM3. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase (AK) HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae, and other related ACT domains. AK is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single AK, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies shown that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=20.77 E-value=2.6e+02 Score=19.52 Aligned_cols=46 Identities=9% Similarity=0.052 Sum_probs=33.5
Q ss_pred HHHHHHHHHhCCEeEEee-ccceeEEEEEeCCCCHHHHHHHHHHhhc
Q psy8066 124 DAIAQSLEKIGGICDCLS-SRDTFIYAASAATSGLDTVMKILGDVVL 169 (529)
Q Consensus 124 ~~l~~~l~~~g~~~~~~t-~~~~~~~~~~~~~~~l~~~l~ll~~~l~ 169 (529)
.++.+.|++.|..+.... +.....+++.+..++.+.+++.+.+.+.
T Consensus 19 ~~if~~L~~~~I~v~~i~q~~s~~~isf~v~~~~~~~a~~~lh~~~~ 65 (66)
T cd04919 19 GRMFTTLADHRINIEMISQGASEINISCVIDEKDAVKALNIIHTNLL 65 (66)
T ss_pred HHHHHHHHHCCCCEEEEEecCccceEEEEEeHHHHHHHHHHHHHHHh
Confidence 356677778888764332 2245888888898999999999888764
No 50
>cd08779 Death_PIDD Death Domain of p53-induced protein with a death domain. Death domain (DD) found in PIDD (p53-induced protein with a death domain) and similar proteins. PIDD is a component of the PIDDosome complex, which is an oligomeric caspase-activating complex involved in caspase-2 activation and plays a role in mediating stress-induced apoptosis. The PIDDosome complex is composed of three components, PIDD, RAIDD and caspase-2, which interact through their DDs and DD-like domains. The DD of PIDD interacts with the DD of RAIDD, which also contains a Caspase Activation and Recruitment Domain (CARD) that interacts with the caspase-2 CARD. Autoproteolysis of PIDD determines the downstream signaling event, between pro-survival NF-kB or pro-death caspase-2 activation. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members
Probab=20.45 E-value=4e+02 Score=20.44 Aligned_cols=78 Identities=14% Similarity=0.112 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHh--cCCCCChhHHHHHhccCCHH
Q psy8066 402 NVKNIVDVLVKELVTMAG--PIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLA--TGHRKRPSTYIESIENVTED 477 (529)
Q Consensus 402 ~~~~~i~~i~~~l~~l~~--~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~i~~vT~e 477 (529)
++..+-..+-..+..+.. |+++.++++.+...-. +.....-.+...+.. .+.......+..++.++...
T Consensus 4 ~l~~ia~~LG~~Wk~lar~LGlse~~Id~Ie~~~~~-------dl~eq~~~mL~~W~~~~~~~~atv~~L~~AL~~~gr~ 76 (86)
T cd08779 4 NLLSIAGRLGLDWQAIGLHLGLSYRELQRIKYNNRD-------DLDEQIFDMLFSWAQRQAGDPDAVGKLVTALEESGRQ 76 (86)
T ss_pred HHHHHHHHHhHHHHHHHHHcCCCHHHHHHHHHHCcc-------CHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHcCHH
Confidence 344555566667777753 8999999999865422 222222333322222 22233456788999999999
Q ss_pred HHHHHHHHh
Q psy8066 478 DIRRVASRL 486 (529)
Q Consensus 478 di~~~a~~~ 486 (529)
|+.+-.+..
T Consensus 77 dlae~l~~~ 85 (86)
T cd08779 77 DLADEVRAV 85 (86)
T ss_pred HHHHHHHhh
Confidence 998877654
No 51
>PRK05163 rpsL 30S ribosomal protein S12; Validated
Probab=20.31 E-value=2.4e+02 Score=23.35 Aligned_cols=44 Identities=23% Similarity=0.191 Sum_probs=30.6
Q ss_pred ccCCCCCeEEEEcCCCCEEE-EEecCCCe--eEEEEEEecCCCCCCC
Q psy8066 57 VKDNDRNTQVTTLPNGLRVA-SENRFGSF--CTIGVIIDSGSRYEQP 100 (529)
Q Consensus 57 ~~~~~~~~~~~~L~NGl~v~-~~~~~~~~--~~~~l~v~~G~~~e~~ 100 (529)
++...++.-.++|+||-.|. +.|.++-. -+-.+.+.+|...|-+
T Consensus 45 PNSA~RKvarVrL~ngk~v~AyIPGeGhnlqehs~VLvrGGrv~DlP 91 (124)
T PRK05163 45 PNSALRKVARVRLTNGFEVTAYIPGEGHNLQEHSVVLIRGGRVKDLP 91 (124)
T ss_pred CCchhheEEEEEeCCCCEEEEEcCCCCCCccccCEEEEeCCccCCCC
Confidence 46677888999999999997 67765422 2334566678776643
No 52
>cd08814 DED_Caspase_10_repeat2 Death Effector Domain, repeat 2, of Caspase-10. Death effector domain (DED) found in Caspase-10, repeat 2. Caspases are aspartate-specific cysteine proteases with functions in apoptosis and immune signaling. Initiator caspases are the first to be activated following death- or inflammation-inducing signals. Caspase-10 is an initiator of death receptor mediated apoptosis. Together with FADD, caspase-8 and the pseudo-caspase c-FLIP, it forms the death-inducing signaling complex (DISC), whose formation is triggered by the activation of type 1 tumor necrosis factor (TNF) receptors such as Fas, TNF receptor 1, and TRAIL receptor. It contains two N-terminal DED domains and a C-terminal caspase domain. DEDs comprise a subfamily of the Death Domain (DD) superfamily. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other m
Probab=20.06 E-value=4e+02 Score=20.24 Aligned_cols=74 Identities=11% Similarity=0.078 Sum_probs=43.0
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHhcCCCCChhHHHHHhccCCHHHHHHHHHHh
Q psy8066 410 LVKELVTMAGPIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGHRKRPSTYIESIENVTEDDIRRVASRL 486 (529)
Q Consensus 410 i~~~l~~l~~~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~ 486 (529)
++..+-++.+.+|.++++..|=-+...+.....+.-.++..+-.+- .-.++........+.++. .|+.+-+++|
T Consensus 4 yr~lL~~iSe~lt~edL~~lKFLl~~~i~~~~~t~Ldlf~~LEk~~--~L~~dnl~~L~~il~~i~-~dL~~~I~~y 77 (79)
T cd08814 4 YRNMLYELSENITSEDLKDIIFLLKDHLPKTEKTFLSLLAFLEKQN--LLTENNLTILEDICKTVS-PDLLKNIEKY 77 (79)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHhHHHcCcccccHHHHHHHHHhcC--CCCCccHHHHHHHHHHHH-HHHHHHHHHh
Confidence 3444556666899999999998887666544333323333222111 111234455556666677 7777777665
Done!