BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8067
(239 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R513|MPPA_PONAB Mitochondrial-processing peptidase subunit alpha OS=Pongo abelii
GN=PMPCA PE=2 SV=2
Length = 525
Score = 247 bits (631), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 117/223 (52%), Positives = 163/223 (73%), Gaps = 10/223 (4%)
Query: 27 CSQAKPPPPSFQQ---------PPLSTPLPGLPKVHYSCVKDNDR-NTQVTTLPNGLRVA 76
CS+ + PP++++ PLS+PLPG+PK ++ V ++ T+VTTL NGLRVA
Sbjct: 20 CSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVA 79
Query: 77 SENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGI 136
S+N+FG FCT+G++I+SGSRYE Y SG++HFLEKLAF+ST+ + +KD I +LEK GGI
Sbjct: 80 SQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGI 139
Query: 137 CDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRP 196
CDC +SRDT +YA SA + GLDTV+ +L DVVL+P+ + EE+ M R T+QFELE+ +RP
Sbjct: 140 CDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLQPRLTDEEVEMTRMTVQFELEDLNLRP 199
Query: 197 EQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
+ E LL +MIH AAY++NT+GL + CP +I IN L +YL
Sbjct: 200 DPEPLLTEMIHEAAYRENTVGLHRFCPTENIAKINREVLHSYL 242
>sp|Q10713|MPPA_HUMAN Mitochondrial-processing peptidase subunit alpha OS=Homo sapiens
GN=PMPCA PE=1 SV=2
Length = 525
Score = 245 bits (625), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 115/223 (51%), Positives = 162/223 (72%), Gaps = 10/223 (4%)
Query: 27 CSQAKPPPPSFQQ---------PPLSTPLPGLPKVHYSCVKDNDR-NTQVTTLPNGLRVA 76
CS+ + PP++++ PLS+PLPG+PK ++ V ++ T+VTTL NGLRVA
Sbjct: 20 CSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVA 79
Query: 77 SENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGI 136
S+N+FG FCT+G++I+SGSRYE Y SG++HFLEKLAF+ST+ + +KD I +LEK GGI
Sbjct: 80 SQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGI 139
Query: 137 CDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRP 196
CDC +SRDT +YA SA + GLDTV+ +L DVVL+P+ + EE+ M R +QFELE+ +RP
Sbjct: 140 CDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEVEMTRMAVQFELEDLNLRP 199
Query: 197 EQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
+ E LL +MIH AAY++NT+GL + CP ++ IN L +YL
Sbjct: 200 DPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREVLHSYL 242
>sp|Q0P5M8|MPPA_BOVIN Mitochondrial-processing peptidase subunit alpha OS=Bos taurus
GN=PMPCA PE=2 SV=1
Length = 525
Score = 244 bits (622), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 112/200 (56%), Positives = 152/200 (76%), Gaps = 1/200 (0%)
Query: 41 PLSTPLPGLPKVHYSCVKDNDR-NTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQ 99
PLS+PLPG+PK ++ V ++ T+VTTL NGLRVAS+N+FG FCT+G++I+SGSRYE
Sbjct: 43 PLSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEA 102
Query: 100 PYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDT 159
Y SG++HFLEKLAF+ST + +KD I +LEK GGICDC +SRDT +YA SA + GLDT
Sbjct: 103 KYLSGIAHFLEKLAFSSTERFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDT 162
Query: 160 VMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLP 219
V+ +L DVVL P+ + EEI MAR +QFELE+ MRP+ E LL +M+H AAY++NT+GL
Sbjct: 163 VVGLLADVVLHPRLTDEEIEMARMAVQFELEDLNMRPDPEPLLTEMVHEAAYRENTVGLH 222
Query: 220 KLCPPASIGVINNNTLFTYL 239
+ CP ++G ++ + L YL
Sbjct: 223 RFCPAENVGKMDRDVLHAYL 242
>sp|P20069|MPPA_RAT Mitochondrial-processing peptidase subunit alpha OS=Rattus
norvegicus GN=Pmpca PE=1 SV=1
Length = 524
Score = 243 bits (619), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 152/200 (76%), Gaps = 1/200 (0%)
Query: 41 PLSTPLPGLPKVHYSCVKDNDR-NTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQ 99
PLS+PLPG+PK ++ V ++ T+VTTL NGLRVAS+N+FG FCT+G++I+SGSRYE
Sbjct: 42 PLSSPLPGVPKPIFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTLGILINSGSRYEA 101
Query: 100 PYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDT 159
Y SG++HFLEKLAF+ST+ + +KD I +LEK GGICDC +SRDT +YA SA + GLDT
Sbjct: 102 KYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDT 161
Query: 160 VMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLP 219
V+ +L DVVL P+ + EEI M R +QFELE+ MRP+ E LL +MIH AA+++NT+GL
Sbjct: 162 VVGLLADVVLHPRLTDEEIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLH 221
Query: 220 KLCPPASIGVINNNTLFTYL 239
+ CP +IG I+ L +YL
Sbjct: 222 RFCPVENIGKIDREVLHSYL 241
>sp|Q9DC61|MPPA_MOUSE Mitochondrial-processing peptidase subunit alpha OS=Mus musculus
GN=Pmpca PE=1 SV=1
Length = 524
Score = 241 bits (614), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 112/200 (56%), Positives = 151/200 (75%), Gaps = 1/200 (0%)
Query: 41 PLSTPLPGLPKVHYSCVKDNDR-NTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQ 99
PLS+PLPG+PK ++ V ++ T+VTTL NGLRVAS+N+FG FCT+G++I+SGSRYE
Sbjct: 42 PLSSPLPGVPKPIFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEA 101
Query: 100 PYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDT 159
Y SG++HFLEKLAF+ST+ + +KD I +LEK GGICDC +SRDT +YA SA + GLDT
Sbjct: 102 KYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDT 161
Query: 160 VMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLP 219
V+ +L DVVL P+ + EEI M R +QFELE+ MRP+ E LL +MIH AA+++NT+GL
Sbjct: 162 VVDLLADVVLHPRLTDEEIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLH 221
Query: 220 KLCPPASIGVINNNTLFTYL 239
+ CP +I I+ L +YL
Sbjct: 222 RFCPVENIAKIDREVLHSYL 241
>sp|P23955|MPPA_NEUCR Mitochondrial-processing peptidase subunit alpha OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=mpp PE=1 SV=2
Length = 577
Score = 137 bits (346), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 108/173 (62%), Gaps = 3/173 (1%)
Query: 66 VTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDA 125
+TTL NG+RVASE+ +F +GV ID+GSRYE Y G SH +++LAF STS D
Sbjct: 54 ITTLSNGVRVASEDLPDAFSGVGVYIDAGSRYENDYVRGASHIMDRLAFKSTSTRT-ADE 112
Query: 126 IAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTI 185
+ +++EK+GG C SSR++ +Y A+ + T ++++ + + PK + EE+ T
Sbjct: 113 MLETVEKLGGNIQCASSRESMMYQAATFNKAIPTAVELMAETIRDPKLTDEELEGQIMTA 172
Query: 186 QFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTY 238
Q+E+ ++ + E +L +++H AA+KDNTLG P LCP + IN + + TY
Sbjct: 173 QYEVN--EIWSKAELILPELVHMAAFKDNTLGNPLLCPKERLDYINRDVIQTY 223
>sp|P11914|MPPA_YEAST Mitochondrial-processing peptidase subunit alpha OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS2 PE=1
SV=1
Length = 482
Score = 124 bits (310), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 111/185 (60%), Gaps = 4/185 (2%)
Query: 54 YSCVKDNDRNTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLA 113
YS + D N ++++L NGL+VA+ N G F +G+ ID+GSR+E G +H L++LA
Sbjct: 10 YSNIARTD-NFKLSSLANGLKVATSNTPGHFSALGLYIDAGSRFEGRNLKGCTHILDRLA 68
Query: 114 FNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKF 173
F ST E+V A+A++LE +GG C SSR+ +Y AS + +++++ + V PK
Sbjct: 69 FKST-EHVEGRAMAETLELLGGNYQCTSSRENLMYQASVFNQDVGKMLQLMSETVRFPKI 127
Query: 174 SKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNN 233
+++E+ + + ++E++ M+P E +L +++H AAY TLG P +CP I I+
Sbjct: 128 TEQELQEQKLSAEYEIDEVWMKP--ELVLPELLHTAAYSGETLGSPLICPRELIPSISKY 185
Query: 234 TLFTY 238
L Y
Sbjct: 186 YLLDY 190
>sp|Q9CXT8|MPPB_MOUSE Mitochondrial-processing peptidase subunit beta OS=Mus musculus
GN=Pmpcb PE=2 SV=1
Length = 489
Score = 113 bits (283), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Query: 64 TQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNK 123
TQVT L NGLRVASEN S CT+G+ ID+GSRYE +G +HFLE +AF T +
Sbjct: 58 TQVTCLENGLRVASENSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQL 117
Query: 124 DAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQ 183
D + +E +G + +SR+ +Y A A + L ++IL D++ + EI R
Sbjct: 118 D-LELEIENMGAHLNAYTSREQTVYYAKAFSRDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 184 TIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
I E++ + ++ ++ D +HA AY++ LG L P +I IN L Y+
Sbjct: 177 VILREMQEVETNLQE--VVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYI 230
>sp|Q03346|MPPB_RAT Mitochondrial-processing peptidase subunit beta OS=Rattus
norvegicus GN=Pmpcb PE=1 SV=3
Length = 489
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Query: 64 TQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNK 123
TQVT L NGLRVASEN S CT+G+ ID+GSRYE +G +HFLE +AF T +
Sbjct: 58 TQVTCLENGLRVASENSGISTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQL 117
Query: 124 DAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQ 183
D + +E +G + +SR+ +Y A A + L ++IL D++ + EI R
Sbjct: 118 D-LELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 184 TIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
I E++ + ++ ++ D +HA AY++ LG L P +I I+ L Y+
Sbjct: 177 VILREMQEVETNLQE--VVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYI 230
>sp|P43264|QCR1_EUGGR Ubiquinol-cytochrome-c reductase complex core protein I,
mitochondrial OS=Euglena gracilis PE=2 SV=1
Length = 494
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 62 RNTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYV 121
R T LPNG R+ASE++ G CT+GV ID+GSR+E +GV+HFLE + F T +
Sbjct: 25 RPTLQNALPNGFRIASESKDGDTCTVGVWIDAGSRWETEKNNGVAHFLEHMNFKGTGKRS 84
Query: 122 NKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMA 181
+D I +EK+G + +SR+ Y + + IL D++L K ++++++
Sbjct: 85 RQD-IEFGMEKMGAHLNAYTSREHTCYYVKCFKKDVPEAVDILADILLNSKRTEQDLDAE 143
Query: 182 RQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASI 227
RQTI E E+ + R ++ +LMD +H+AA++ + LGL L P +I
Sbjct: 144 RQTIVQEKEDVEARIDE--VLMDHLHSAAFEGSGLGLSILGPLENI 187
>sp|Q42290|MPPB_ARATH Probable mitochondrial-processing peptidase subunit beta
OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2
Length = 531
Score = 110 bits (275), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 98/177 (55%), Gaps = 4/177 (2%)
Query: 64 TQVTTLPNGLRVASE-NRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVN 122
T+VTTLPNGLRVA+E N T+GV ID+GSR+E +G +HFLE + F T
Sbjct: 97 TRVTTLPNGLRVATESNLSAKTATVGVWIDAGSRFESDETNGTAHFLEHMIFKGTDRRTV 156
Query: 123 KDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMAR 182
+ A+ + +E IGG + +SR+ Y A S ++ + +L D++ KF ++ IN R
Sbjct: 157 R-ALEEEIEDIGGHLNAYTSREQTTYYAKVLDSNVNQALDVLADILQNSKFEEQRINRER 215
Query: 183 QTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
I E++ ++ + + +++D +HA A++ LG L P ++ I L Y+
Sbjct: 216 DVILREMQ--EVEGQTDEVVLDHLHATAFQYTPLGRTILGPAQNVKSITREDLQNYI 270
>sp|Q3SZ71|MPPB_BOVIN Mitochondrial-processing peptidase subunit beta OS=Bos taurus
GN=PMPCB PE=2 SV=1
Length = 490
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Query: 64 TQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNK 123
T+VT L NGLRVASE+ + CT+G+ ID+GSRYE +G +HFLE +AF T +
Sbjct: 59 TRVTCLENGLRVASEDSGLATCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQL 118
Query: 124 DAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQ 183
D + +E +G + +SR+ +Y A A + L ++IL D++ + EI R
Sbjct: 119 D-LELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 177
Query: 184 TIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
I E++ + ++ ++ D +HA AY++ LG L P +I IN L Y+
Sbjct: 178 VILREMQEVETNLQE--VVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYI 231
>sp|P97997|MPPA_BLAEM Mitochondrial-processing peptidase subunit alpha OS=Blastocladiella
emersonii PE=3 SV=1
Length = 474
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 3/178 (1%)
Query: 62 RNTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYV 121
R+T +T LP+G+RVA+ F +GV +D+G YE GVSHF+ LAF ST
Sbjct: 13 RSTCMTRLPSGIRVATAPSNSHFAAVGVYVDAGPIYETSIDRGVSHFVSSLAFKST-HGA 71
Query: 122 NKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMA 181
+ + +++ +GG C ++R++ +Y S L +++L D LRP ++EEI
Sbjct: 72 TESQVLKTMAGLGGNLFCTATRESILYQGSVLHHDLPRTVQLLADTTLRPALTEEEIAER 131
Query: 182 RQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
R TI FE E+ RP + + +M+HA A+ LG C P + ++T+ Y
Sbjct: 132 RATIAFEAEDLHSRP--DAFIGEMMHAVAFGGRGLGNSIFCEPQRARNMTSDTIREYF 187
>sp|O75439|MPPB_HUMAN Mitochondrial-processing peptidase subunit beta OS=Homo sapiens
GN=PMPCB PE=1 SV=2
Length = 489
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Query: 64 TQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNK 123
T+VT L +GLRVASE+ S CT+G+ ID+GSRYE +G +HFLE +AF T +
Sbjct: 58 TRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQL 117
Query: 124 DAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQ 183
D + +E +G + +SR+ +Y A A + L ++IL D++ + EI R
Sbjct: 118 D-LELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 184 TIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
I E++ + ++ ++ D +HA AY++ LG L P +I I+ L Y+
Sbjct: 177 VILREMQEVETNLQE--VVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYI 230
>sp|Q5REK3|MPPB_PONAB Mitochondrial-processing peptidase subunit beta OS=Pongo abelii
GN=PMPCB PE=2 SV=1
Length = 489
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Query: 64 TQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNK 123
T+VT L +GLRVASE+ S CT+G+ ID+GSRYE +G +HFLE +AF T +
Sbjct: 58 TRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQL 117
Query: 124 DAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQ 183
D + +E +G + +SR+ +Y A A + L ++IL D++ + EI R
Sbjct: 118 D-LELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 184 TIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
I E++ + ++ ++ D +HA AY++ LG L P +I I+ L Y+
Sbjct: 177 VILREMQEVETNLQE--VVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYI 230
>sp|Q4W6B5|MPPB_DICDI Mitochondrial-processing peptidase subunit beta OS=Dictyostelium
discoideum GN=mppB PE=1 SV=1
Length = 469
Score = 103 bits (258), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Query: 64 TQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNK 123
T++TTL NG+RVA+E +G ++GV +DSGS YE +GV+HFLE + F T++
Sbjct: 35 TKITTLSNGIRVATEQTYGEVASVGVWVDSGSVYETDKNNGVAHFLEHMIFKGTAKRPTP 94
Query: 124 DAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQ 183
+I +E +GG + +SR+ Y + + IL D++ KF I R
Sbjct: 95 QSIETEIENMGGSLNAFTSREHSAYYMKVLKDNVPNAVDILSDILQNSKFETSLIEQERD 154
Query: 184 TIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVI 230
TI EN ++ +++ ++ D +HAAA++ + LG L P +I I
Sbjct: 155 TILS--ENDYIQSKEDEVVFDQLHAAAFQGSALGRTILGPVENIKSI 199
>sp|O94745|MPPA_SCHPO Probable mitochondrial-processing peptidase subunit alpha
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mas2 PE=3 SV=2
Length = 502
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 3/171 (1%)
Query: 69 LPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQ 128
L NG+ + R G F +GV + +GSRYE SGVSHF+++LAF +T E +
Sbjct: 59 LKNGVTYVCDPRPGHFSGLGVYVKAGSRYETKKFSGVSHFMDRLAFQAT-ERTPVGEMKA 117
Query: 129 SLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFE 188
LE +GG C +SR++ IY A+ + ++ K+L + VL PK ++++ R +I +
Sbjct: 118 KLENLGGNYMCSTSRESMIYQAAVFNDDVKSMSKLLAETVLAPKIQEDDLVHYRDSIIY- 176
Query: 189 LENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
EN ++ + + LL + H A+++NTLG LC P + I ++ YL
Sbjct: 177 -ENSELWTKPDALLGEFAHVTAFQNNTLGNCLLCTPDKVNGITATSIREYL 226
>sp|Q00302|MPPB_BLAEM Mitochondrial-processing peptidase subunit beta OS=Blastocladiella
emersonii GN=MPP1 PE=3 SV=1
Length = 465
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 4/177 (2%)
Query: 64 TQVTTLPNGLRVASE-NRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVN 122
TQVT LPNGL VA+E N + T+GV IDSGSR E +GV+HFLE ++F T +
Sbjct: 35 TQVTRLPNGLTVATESNPALATATVGVWIDSGSRAETKANNGVAHFLEHISFKGTKQRT- 93
Query: 123 KDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMAR 182
+ + +E +GG + +SR+ +Y A + + + ILGD++ I+ R
Sbjct: 94 QSGLEIEIENMGGHLNAYTSREQTVYYAKLFSQDVAKGVNILGDILQNSTLDPGAIDRER 153
Query: 183 QTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
I E E ++ + E ++ D +HAAA+ +N LG L P +I ++ L Y+
Sbjct: 154 AVILREAE--EVDKQVEEVVFDHLHAAAFPENALGYTILGPKENIQTLSQADLQAYI 208
>sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum
tuberosum GN=MPP PE=1 SV=1
Length = 504
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 8/174 (4%)
Query: 64 TQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNK 123
TQ+TTL NGL+VASE +IG+ +D GS YE P G +H LE++AF ST +N+
Sbjct: 75 TQITTLANGLKVASEASVNPAASIGLYVDCGSIYETPASYGATHLLERMAFKST---LNR 131
Query: 124 D--AIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMA 181
I + +E IGG +SR+ IY A + + ++++L D V P F E+
Sbjct: 132 SHLRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLADCVRNPAFLDWEVKEQ 191
Query: 182 RQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTL 235
+ ++ E+ Y P+ LL++ +H+A Y G + A+I +N+ L
Sbjct: 192 LEKVKAEISEYSKNPQH--LLLEAVHSAGYA-GPYGNSLMATEATINRLNSTVL 242
>sp|Q9CZ13|QCR1_MOUSE Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus
GN=Uqcrc1 PE=1 SV=2
Length = 480
Score = 94.4 bits (233), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 3/176 (1%)
Query: 64 TQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNK 123
TQV+ L NGLRVASE + CT+GV ID+GSRYE +G +FLE LAF T
Sbjct: 48 TQVSILDNGLRVASEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPG- 106
Query: 124 DAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQ 183
+A+ + +E IG + S+R+ Y A + L V+++L D+V +I R
Sbjct: 107 NALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERD 166
Query: 184 TIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
I E++ + + ++ D +HA A++ L P ++ ++ L YL
Sbjct: 167 VILREMQ--ENDASMQNVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYL 220
>sp|P11913|MPPB_NEUCR Mitochondrial-processing peptidase subunit beta OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=pep PE=1 SV=1
Length = 476
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 4/177 (2%)
Query: 64 TQVTTLPNGLRVASENR-FGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVN 122
TQ TTL NGL VAS+ + T+G+ ID+GSR E +G +HFLE LAF T++
Sbjct: 40 TQTTTLKNGLTVASQYSPYAQTSTVGMWIDAGSRAETDETNGTAHFLEHLAFKGTTKRTQ 99
Query: 123 KDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMAR 182
+ + +E +G + +SR+ +Y A A + + IL D++ K + I R
Sbjct: 100 QQ-LELEIENMGAHLNAYTSRENTVYFAKALNEDVPKCVDILQDILQNSKLEESAIERER 158
Query: 183 QTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
I E E ++ + E ++ D +HA AY+ LG L P +I I L Y+
Sbjct: 159 DVILRESE--EVEKQLEEVVFDHLHATAYQHQPLGRTILGPRENIRDITRTELVNYI 213
>sp|Q9ZU25|MPPA1_ARATH Probable mitochondrial-processing peptidase subunit alpha-1
OS=Arabidopsis thaliana GN=At1g51980 PE=1 SV=1
Length = 503
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 65 QVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKD 124
Q+TTLPNGL++ASE +IG+ +D GS YE PY G +H LE++AF ST +N+
Sbjct: 79 QITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGATHLLERMAFKST---LNRT 135
Query: 125 --AIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMAR 182
+ + +E IGG +SR+ Y A + + ++++L D V P F E+N
Sbjct: 136 HFRLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNEEL 195
Query: 183 QTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
+ ++ E+ P L++ IH+A Y L P P +++ +N L ++
Sbjct: 196 RKMKVEIAELAKNP--MGFLLEAIHSAGY-SGPLASPLYAPESALDRLNGELLEEFM 249
>sp|Q68FY0|QCR1_RAT Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus
norvegicus GN=Uqcrc1 PE=1 SV=1
Length = 480
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 87/176 (49%), Gaps = 3/176 (1%)
Query: 64 TQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNK 123
TQV+ L NGLRVASE CT+GV ID GSRYE +G +FLE LAF T
Sbjct: 48 TQVSVLDNGLRVASEQSSHPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRPG- 106
Query: 124 DAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQ 183
+A+ + +E IG + S+R+ Y A + L V+++L D+V +I R
Sbjct: 107 NALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNISLEDSQIEKERD 166
Query: 184 TIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
I E++ + + ++ D +HA A++ L P ++ ++ L YL
Sbjct: 167 VILREMQ--ENDASMQNVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYL 220
>sp|P98080|UCR1_CAEEL Cytochrome b-c1 complex subunit 1, mitochondrial OS=Caenorhabditis
elegans GN=ucr-1 PE=3 SV=2
Length = 471
Score = 90.5 bits (223), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Query: 65 QVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKD 124
+VTTL NG RV +E+ + T+GV I++GSR+E +GV+HFLE+L T + +
Sbjct: 39 EVTTLKNGFRVVTEDNGSATATVGVWIETGSRFENEKNNGVAHFLERLIHKGTGKRASA- 97
Query: 125 AIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQT 184
A+ L IG + + RD A ++ V+ IL DV+ K I+ R
Sbjct: 98 ALESELNAIGAKLNSFTERDQTAVFVQAGAQDVEKVVDILADVLRNSKLEASTIDTERVN 157
Query: 185 IQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASI 227
+ ELE + +L DM+HAA ++ L L L SI
Sbjct: 158 LLKELEASD--DYHQLVLFDMLHAAGFQGTPLALSVLGTSESI 198
>sp|Q9Y8B5|MPPB_LENED Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes
GN=mppB PE=3 SV=1
Length = 466
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 4/177 (2%)
Query: 64 TQVTTLPNGLRVASENR-FGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVN 122
T+++TL NGL VA+E++ T+GV ID+GSR E +G +HFLE +AF T +
Sbjct: 29 TEISTLSNGLTVATESQPHAQTATVGVWIDAGSRAETDKTNGTAHFLEHMAFKGTGRR-S 87
Query: 123 KDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMAR 182
+ A+ +E IG + +SR+ +Y A + + + + I+ D++ K I R
Sbjct: 88 QHALELEVENIGAHLNAYTSREQTVYYAKSFSKDVPVAVDIISDILQNSKLESGAIERER 147
Query: 183 QTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
I E + ++ + E ++ D +HA A++ LG L P +I I + L +Y+
Sbjct: 148 DVILREQQ--EVDKQLEEVVFDHLHAVAFQGQPLGRTILGPKNNILSIQRDDLASYI 202
>sp|Q9P7X1|MPPB_SCHPO Probable mitochondrial-processing peptidase subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=qcr1 PE=2 SV=1
Length = 457
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
Query: 46 LPGLPKVHYSCVKDNDRNTQVTTLPNGLRVASENR-FGSFCTIGVIIDSGSRYEQPYPSG 104
L LPK+ T+ TTL NGL VA+E+ + T+ V +D+GSR E +G
Sbjct: 4 LQNLPKLVRRFATTALPKTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAKNNG 63
Query: 105 VSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKIL 164
+HFLE LAF T K A+ E G + +SR+ +Y A A + + + +L
Sbjct: 64 AAHFLEHLAFKGTKNRSQK-ALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVAVL 122
Query: 165 GDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPP 224
D++ S + RQ I E E ++ ++ D +HA AY+ + LG L P
Sbjct: 123 ADILTNSSISASAVERERQVILREQEEVDKMADE--VVFDHLHATAYQGHPLGRTILGPK 180
Query: 225 ASIGVINNNTLFTYL 239
+I + L Y+
Sbjct: 181 ENIESLTREDLLQYI 195
>sp|Q86A84|MPPA1_DICDI Mitochondrial-processing peptidase subunit alpha-1 OS=Dictyostelium
discoideum GN=mppA1 PE=1 SV=1
Length = 654
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 23/195 (11%)
Query: 59 DNDRNT-------QVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEK 111
DN+ N +++TLPNG+RV S+ C IG+ I++G++YE P GV + LEK
Sbjct: 132 DNEANNNQKEFKAEISTLPNGIRVVSKQTHEGVCAIGLYINAGTKYESPQDRGVFNLLEK 191
Query: 112 LAF-----NSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGD 166
+ F NSTSE I + LE+I SSR+ + L+ V+ IL D
Sbjct: 192 MTFKETKNNSTSE------IIKELEEISMNAMASSSREMINVSLEVLRKDLEFVLSILSD 245
Query: 167 VVLRPKFSKEEINMARQTIQFELENYQM--RPEQETLLMDMIHAAAYKDNTLGLPKLCPP 224
+ P +S+EE+ R+ I+ + NY+M + L+ +++ A+ D LG + P
Sbjct: 246 QIKSPTYSEEEL---REQIEVCIRNYEMITNSSSDQLMTEILMGVAFGDAGLGNLVIATP 302
Query: 225 ASIGVINNNTLFTYL 239
I LF L
Sbjct: 303 EQYQNITREKLFDAL 317
>sp|Q04805|YMXG_BACSU Uncharacterized zinc protease YmxG OS=Bacillus subtilis (strain
168) GN=ymxG PE=3 SV=3
Length = 409
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 90/173 (52%), Gaps = 4/173 (2%)
Query: 68 TLPNGLRVASENR-FGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAI 126
T NG+R+ EN IGV I +GSR+E P +G+SHFLE + F TS ++ I
Sbjct: 6 TCQNGVRIVLENNPTVRSVAIGVWIGTGSRHETPEINGISHFLEHMFFKGTSTKSARE-I 64
Query: 127 AQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQ 186
A+S ++IGG + +S++ Y A + + +L D+ F + E+ + +
Sbjct: 65 AESFDRIGGQVNAFTSKEYTCYYAKVLDEHANYALDVLADMFFHSTFDENELKKEKNVVY 124
Query: 187 FELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
E++ Y+ P+ ++ D++ A Y +++LG P L ++ N ++L Y+
Sbjct: 125 EEIKMYEDAPDD--IVHDLLSKATYGNHSLGYPILGTEETLASFNGDSLRQYM 175
>sp|O32965|Y855_MYCLE Uncharacterized zinc protease ML0855 OS=Mycobacterium leprae
(strain TN) GN=ML0855 PE=3 SV=1
Length = 445
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 91/174 (52%), Gaps = 6/174 (3%)
Query: 67 TTLPNGLRVASENRFG-SFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDA 125
TTLP GLRV +E+ ++GV + GSR E +G +HFLE L F STS D
Sbjct: 25 TTLPGGLRVVTEHLPAVRSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTSTRTAMD- 83
Query: 126 IAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTI 185
IAQ+++ +GG + ++++ Y A S L+ + ++ DVVL + + +++ + R +
Sbjct: 84 IAQAIDAVGGELNAFTAKEHTCYYAHVLDSDLELAVDLVADVVLNGRCAVDDVELERDVV 143
Query: 186 QFELENYQMRPEQ-ETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTY 238
LE MR + E L DM AA + D+ +G P + S+ + L ++
Sbjct: 144 ---LEEIAMRDDDPEDALGDMFLAALFGDHPVGRPVIGTMESVSAMTRTQLHSF 194
>sp|Q4UML9|Y338_RICFE Uncharacterized zinc protease RF_0338 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0338 PE=3 SV=1
Length = 412
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Query: 62 RNTQVTTLPNGLRVASENR-FGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEY 120
N ++ L NGL V + N + I +I GSRYE G+SHFLE +AF T+
Sbjct: 3 ENFNISKLKNGLTVLTYNMPYVDSVAINLITKVGSRYENSEEEGISHFLEHMAFKGTTTR 62
Query: 121 VNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINM 180
K IA+ ++IGG + + + IY A + D + IL D++ F++EEI
Sbjct: 63 TAKQ-IAEEFDEIGGHFNAYTGHEKTIYYARVLSENCDKALNILADIIQNSIFAEEEIAK 121
Query: 181 ARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
Q I E+ + Q P+ L+ + +++ YKD LG P L ++ +++
Sbjct: 122 EYQVILQEIAHSQDNPDD--LIYEKFYSSVYKDQPLGKPILGASKTLSSFTKEHFLSFI 178
>sp|P31800|QCR1_BOVIN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus
GN=UQCRC1 PE=1 SV=2
Length = 480
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Query: 64 TQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNK 123
TQV+ L NGLRVASE CT+GV ID+GSRYE +G +F+E LAF T
Sbjct: 48 TQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPG- 106
Query: 124 DAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQ 183
+A+ + +E +G + S+R+ Y A + L +++L D+V +I R
Sbjct: 107 NALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERD 166
Query: 184 TIQFELENYQMRPEQETLLMDMI----HAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
I EL+ E +T + D++ HA A++ L P ++ ++ L YL
Sbjct: 167 VILQELQ------ENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYL 220
>sp|P31930|QCR1_HUMAN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens
GN=UQCRC1 PE=1 SV=3
Length = 480
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 7/179 (3%)
Query: 63 NTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVN 122
TQV+ L NGLRVASE CT+GV ID GSR+E +G +FLE LAF T
Sbjct: 47 ETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPG 106
Query: 123 KDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMAR 182
A+ + +E +G + S+R+ Y A + L +++LGD+V +I R
Sbjct: 107 S-ALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQIEKER 165
Query: 183 QTIQFELE--NYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
I E++ + MR ++ + +HA A++ L P ++ ++ L YL
Sbjct: 166 DVILREMQENDASMR----DVVFNYLHATAFQGTPLAQAVEGPSENVRKLSRADLTEYL 220
>sp|P10507|MPPB_YEAST Mitochondrial-processing peptidase subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS1 PE=1
SV=1
Length = 462
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Query: 64 TQVTTLPNGLRVASE---NRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEY 120
T+ + LPNGL +A+E N S T+G+ +D+GSR E +G +HFLE LAF T
Sbjct: 26 TRTSKLPNGLTIATEYIPNT--SSATVGIFVDAGSRAENVKNNGTAHFLEHLAFKGTQNR 83
Query: 121 VNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINM 180
++ I +E IG + +SR+ +Y A + + + IL D++ + I
Sbjct: 84 -SQQGIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDILTKSVLDNSAIER 142
Query: 181 ARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
R I E E ++ + ++ D +H YKD LG L P +I I L Y+
Sbjct: 143 ERDVIIRESE--EVDKMYDEVVFDHLHEITYKDQPLGRTILGPIKNIKSITRTDLKDYI 199
>sp|Q9DB77|QCR2_MOUSE Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus
GN=Uqcrc2 PE=1 SV=1
Length = 453
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 4/178 (2%)
Query: 62 RNTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYV 121
++ + T LPNGL +AS + IG+ + +GSRYE G SH L +LA + T++
Sbjct: 36 QDLEFTKLPNGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLL-RLASSLTTKGA 94
Query: 122 NKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMA 181
+ I + +E +GG ++R+ Y S ++ +M+ L +V P+F + E+
Sbjct: 95 SSFKITRGIEAVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPEFRRWEVAAL 154
Query: 182 RQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
R Q +++ +T +++ +H AYK N L P CP +G I + L ++
Sbjct: 155 RS--QLKIDKAVAFQNSQTRIIENLHDVAYK-NALANPLYCPDYRMGKITSEELHYFV 209
>sp|O04308|MPPA2_ARATH Probable mitochondrial-processing peptidase subunit alpha-2
OS=Arabidopsis thaliana GN=MPPA2 PE=1 SV=1
Length = 499
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 12/204 (5%)
Query: 40 PPLSTPLPG--LPKVHYSCVKDNDRNTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRY 97
P ++ PL G LP V+ + T TTLPNGL +A+E +IG+ +D GS Y
Sbjct: 50 PSMNIPLAGVSLPPPLSDHVEPSKLKT--TTLPNGLTIATEMSPNPAASIGLYVDCGSIY 107
Query: 98 EQPYPSGVSHFLEKLAFNSTSEYVNKD--AIAQSLEKIGGICDCLSSRDTFIYAASAATS 155
E P G +H LE++AF ST +N+ + + +E IGG +SR+ Y A +
Sbjct: 108 ETPQFRGATHLLERMAFKST---LNRSHFRLVREIEAIGGNTSASASREQMGYTIDALKT 164
Query: 156 GLDTVMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNT 215
+ ++++L D V P F E+N + ++ E+ + P L++ +H+A Y
Sbjct: 165 YVPEMVEVLIDSVRNPAFLDWEVNEELRKVKVEIGEFATNP--MGFLLEAVHSAGY-SGA 221
Query: 216 LGLPKLCPPASIGVINNNTLFTYL 239
L P P ++I + L ++
Sbjct: 222 LANPLYAPESAITGLTGEVLENFV 245
>sp|Q1RJ61|Y522_RICBR Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain
RML369-C) GN=RBE_0522 PE=3 SV=1
Length = 412
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 4/178 (2%)
Query: 62 RNTQVTTLPNGLRVASENR-FGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEY 120
N V+ L NGL + + N + + I +I GSRYE P G++HFLE +AF T
Sbjct: 3 ENFNVSKLKNGLTILTYNMPYVNSVAINLIAKVGSRYENPGEEGIAHFLEHMAFKGTKTR 62
Query: 121 VNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINM 180
K IA+ + IGG + + + +Y + + + + I+ D+V F++EEI
Sbjct: 63 TAKQ-IAEEFDSIGGHFNAYTGHEKTVYYSRVLSENCNKALAIIADIVQNSAFAEEEIAK 121
Query: 181 ARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTY 238
Q I E+ + Q P+ L+ + + + +KD LG P L +I N + +
Sbjct: 122 EYQVILQEIAHAQDNPDD--LVYEKFYNSVFKDQPLGKPILGTSKTIETFNRDHFLKF 177
>sp|P0A5S9|Y2805_MYCBO Uncharacterized zinc protease Mb2805c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb2805c PE=3 SV=1
Length = 438
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 16/179 (8%)
Query: 67 TTLPNGLRVASENRFGSF------CTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEY 120
TTLP GLRV +E F ++GV + GSR E +G +HFLE L F ST
Sbjct: 18 TTLPGGLRVVTE-----FLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTR 72
Query: 121 VNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINM 180
D IAQ+++ +GG + ++++ Y A S L + ++ DVVL + + +++ +
Sbjct: 73 SAVD-IAQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEV 131
Query: 181 ARQTIQFELENYQMRPEQ-ETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTY 238
R + LE MR + E L DM AA + D+ +G P + S+ V+ L ++
Sbjct: 132 ERDVV---LEEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSF 187
>sp|P0A5S8|Y2782_MYCTU Uncharacterized zinc protease Rv2782c/MT2852 OS=Mycobacterium
tuberculosis GN=Rv2782c PE=3 SV=1
Length = 438
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 16/179 (8%)
Query: 67 TTLPNGLRVASENRFGSF------CTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEY 120
TTLP GLRV +E F ++GV + GSR E +G +HFLE L F ST
Sbjct: 18 TTLPGGLRVVTE-----FLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTR 72
Query: 121 VNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINM 180
D IAQ+++ +GG + ++++ Y A S L + ++ DVVL + + +++ +
Sbjct: 73 SAVD-IAQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEV 131
Query: 181 ARQTIQFELENYQMRPEQ-ETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTY 238
R + LE MR + E L DM AA + D+ +G P + S+ V+ L ++
Sbjct: 132 ERDVV---LEEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSF 187
>sp|Q92IX7|Y293_RICCN Uncharacterized zinc protease RC0293 OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=RC0293 PE=3 SV=1
Length = 412
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Query: 62 RNTQVTTLPNGLRVASENR-FGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEY 120
N V+ L NGL + + N + + I +I G+RYE G+SHFLE +AF T
Sbjct: 3 ENFNVSKLKNGLTILTYNMPYVNSVAINLIAKVGARYENAEEDGISHFLEHMAFKGTKTR 62
Query: 121 VNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINM 180
K IA++ + IGG + + + +Y A + D + IL D++ FS EEI
Sbjct: 63 TAKQ-IAEAFDAIGGHFNAYTGHENTVYYARVLSENCDKALNILADIIQNSIFSDEEIAK 121
Query: 181 ARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
Q I E+ ++Q P+ L+ + + Y++ LG L ++ F ++
Sbjct: 122 EYQVIMQEIAHHQDNPDD--LVYEKFYNKVYREQPLGKSILGTAKTLATFTKEHFFNFI 178
>sp|P32551|QCR2_RAT Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus
norvegicus GN=Uqcrc2 PE=1 SV=2
Length = 452
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 40 PPLSTPLPGLPKVHYSCVKDNDRNTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQ 99
P L T PG V + + T LPNGL +AS + IG+ I +GSRYE
Sbjct: 20 PKLKTSAPG-------GVPLQPQELEFTKLPNGLVIASLENYAPLSRIGLFIKAGSRYEN 72
Query: 100 PYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDT 159
G SH L +LA T++ + I + +E +GG ++R+ Y ++
Sbjct: 73 YNYLGTSHLL-RLASTLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRDDIEI 131
Query: 160 VMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLP 219
+M+ L +V P+F + E+ R ++ + P +T +++ +H AYK N L P
Sbjct: 132 LMEFLLNVTTAPEFRRWEVAALRSQLKIDKAVAFQNP--QTRIIENLHDVAYK-NALANP 188
Query: 220 KLCPPASIGVINNNTLFTYL 239
CP +G I + L ++
Sbjct: 189 LYCPDYRMGKITSEELHYFV 208
>sp|P23004|QCR2_BOVIN Cytochrome b-c1 complex subunit 2, mitochondrial OS=Bos taurus
GN=UQCRC2 PE=1 SV=2
Length = 453
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 4/178 (2%)
Query: 62 RNTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYV 121
++ + T LPNGL +AS + IG+ I +GSRYE G SH L +LA + T++
Sbjct: 36 QDLEFTRLPNGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLL-RLASSLTTKGA 94
Query: 122 NKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMA 181
+ I + +E +GG S+R+ Y +D +M+ L +V P+F + E+
Sbjct: 95 SSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEVAAL 154
Query: 182 RQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
+ ++ + P+ +++ +HAAAY+ N L CP IG + L Y+
Sbjct: 155 QPQLRIDKAVALQNPQAH--VIENLHAAAYR-NALANSLYCPDYRIGKVTPVELHDYV 209
>sp|P22695|QCR2_HUMAN Cytochrome b-c1 complex subunit 2, mitochondrial OS=Homo sapiens
GN=UQCRC2 PE=1 SV=3
Length = 453
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 4/175 (2%)
Query: 65 QVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKD 124
+ T LPNGL +AS + IG+ I +GSRYE G +H L +L + T++ +
Sbjct: 39 EFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTHLL-RLTSSLTTKGASSF 97
Query: 125 AIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQT 184
I + +E +GG ++R+ Y +D +M+ L +V P+F + E+ A
Sbjct: 98 KITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEV--ADLQ 155
Query: 185 IQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYL 239
Q +++ +T +++ +HAAAY+ N L P CP IG + + L ++
Sbjct: 156 PQLKIDKAVAFQNPQTHVIENLHAAAYR-NALANPLYCPDYRIGKVTSEELHYFV 209
>sp|Q68XF0|Y210_RICTY Uncharacterized zinc protease RT0210 OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=RT0210 PE=3 SV=1
Length = 412
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 62 RNTQVTTLPNGLRVASENR-FGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEY 120
N ++ L NGL + + N + I +I G+RYE G+SHFLE +AF T
Sbjct: 3 ENFNISKLKNGLTILTYNMPYVHSVAINLIAKVGARYENEEEEGISHFLEHMAFKGTKTR 62
Query: 121 VNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINM 180
+ IA+ + IGG + + + +Y + + IL D++ F+ EEI+
Sbjct: 63 TAQQ-IAEEFDSIGGYFNAYTGYENTVYYVRVLSENCHKALNILADIIQNSIFADEEISK 121
Query: 181 ARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASI 227
Q I E+ ++ P+ L+ + + YKD LG L ++
Sbjct: 122 EYQIIMQEIAHHHDNPDD--LIYETFYNTVYKDQPLGKSILGTAKTL 166
>sp|O05945|Y219_RICPR Uncharacterized zinc protease RP219 OS=Rickettsia prowazekii
(strain Madrid E) GN=RP219 PE=3 SV=1
Length = 412
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 62 RNTQVTTLPNGLRVASENR-FGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEY 120
N V+ L NGL + + N + I +I G+RYE G+SHFLE +AF T
Sbjct: 3 ENFNVSKLKNGLTILTYNMPYVHSVAINLIAKVGARYENEEEEGISHFLEHMAFKGTKTR 62
Query: 121 VNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINM 180
+ IA+ + IGG + + + +Y A + + IL D++ F+ EEI
Sbjct: 63 TAQQ-IAEEFDSIGGYFNAYTGHENTVYYARVLSENCHKALNILADIIQNSIFADEEIAK 121
Query: 181 ARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLG 217
Q I E+ ++ P+ L+ + + YK LG
Sbjct: 122 EYQIIMQEIAHHHDNPDD--LIYETFYNTVYKGQPLG 156
>sp|Q5UPX9|YL233_MIMIV Putative zinc protease L233 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L233 PE=3 SV=1
Length = 440
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 8/177 (4%)
Query: 63 NTQVTTLPNGLRVAS--ENRFGSFCTIGVIIDSGSRYE-QPYPSGVSHFLEKLAFNSTSE 119
N Q TL NGL++ N +G + GSR E Y +G+SHFLE + F T+
Sbjct: 2 NYQRKTLKNGLKLVFVPMNNDIPLVAMGFYVGVGSRNEFGAYKNGISHFLEHMMFKRTTN 61
Query: 120 YVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEIN 179
+ D + L+ G + +++ Y S ++ +D ++ I+ D+ L P F ++I
Sbjct: 62 -KSSDELFSELDSTGANYNAITTTQNTCYFLSGNSNYIDKLLDIMLDIFLHPNFVSDDIE 120
Query: 180 MARQTIQFELENYQMRPEQ-ETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTL 235
R+ I +E ++R +Q ++ + IH +K+ +L + SI I+ N L
Sbjct: 121 RERKVI---MEEMKIRADQPQSSMTYQIHEVYFKNTSLSQKVIGSIESIKNIDKNDL 174
>sp|O86835|Y5738_STRCO Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=SCO5738 PE=3
SV=1
Length = 459
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 67 TTLPNGLRVASEN----RFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVN 122
TTLP GLR+ +E R +F G+ GSR E P +G +H+LE L F T +
Sbjct: 38 TTLPGGLRIVTETLPSVRSATF---GIWAHVGSRDETPALNGATHYLEHLLFKGTRKRSA 94
Query: 123 KDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMAR 182
D I+ +++ +GG + ++++ Y A + L + ++ D++ +E++++ R
Sbjct: 95 LD-ISSAIDAVGGEMNAFTAKEYTCYYARVLDTDLPLAIDVVCDMLTGSLIQEEDVDVER 153
Query: 183 QTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTY 238
I E+ + P + D+ + DN LG P L ++ + + + +
Sbjct: 154 GAILEEIAMTEDDPGD--CVHDLFAHTMFGDNALGRPVLGTVDTVNALTADRIRRF 207
>sp|Q54F93|MPPA2_DICDI Mitochondrial-processing peptidase subunit alpha-2 OS=Dictyostelium
discoideum GN=mppA2 PE=1 SV=1
Length = 445
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 55 SCVKDNDRNTQVTTLPNGLRVAS--ENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKL 112
S +++ R + TTL NGL+V S G ++G+ I +GSR E +G++ L+ L
Sbjct: 13 SIFQESKRIVESTTLSNGLKVVSLVGGYTGPAVSLGLYIKTGSRNETQETAGLNQVLKGL 72
Query: 113 AFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTV----MKILGDV- 167
AF S + + + + + +E G +SRD + A L T+ +++L ++
Sbjct: 73 AFESNTNKLGIE-VQRDIEVSGSTAFAQASRDNLLIA-------LQTLPNRSLQMLNNLA 124
Query: 168 -VLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPAS 226
+ +P E+ + I E E Y + + + + +H A++ TLG P + P +
Sbjct: 125 NITKPTLPYHEVRDVTEIIVKESEAYNH--DSYSSIFESVHQTAFRGKTLGRPLVAPICN 182
Query: 227 IGVINNNTLFTYL 239
+G I + + ++
Sbjct: 183 LGNITKDAVTNWV 195
>sp|P43265|QCR2_EUGGR Ubiquinol-cytochrome-c reductase complex core protein 2,
mitochondrial OS=Euglena gracilis PE=1 SV=1
Length = 474
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 40/204 (19%)
Query: 54 YSCVKDNDRNTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLA 113
+ K ++ + + L NG +V + + GS + + G YE + +G+S F++
Sbjct: 44 FEVDKVQEKGLKTSVLDNGTKVITLDNGGSVAQLTFLYKDGPVYENIFNAGISSFMKHAL 103
Query: 114 FN---STSEY------------------VNKDAIAQSLEKIGGICDCLSSRDTFIYAASA 152
++SEY VNK AIA ++E RDT A A
Sbjct: 104 TKDGLTSSEYITKTFLQKAGIIVHEPTVVNKSAIAFTVEGF---------RDTLAQPAVA 154
Query: 153 ATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYK 212
D + L L P+FS E + ++ ++ E + + R L D++H A+K
Sbjct: 155 -----DKFWQSL----LFPRFSPENVKEVKRLVELESKETK-RDSPFAYLQDILHKTAFK 204
Query: 213 DNTLGLPKLCPPASIGVINNNTLF 236
+ LG P ++G I++N LF
Sbjct: 205 GSPLGHTSFVPAYNLGYIDSNKLF 228
>sp|P78761|QCR2_SCHPO Cytochrome b-c1 complex subunit 2, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=qcr2 PE=2 SV=2
Length = 426
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 86 TIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDT 145
++ V+I++GSRY QP +GVSH LEK AF +T E + I + E +GG +R+
Sbjct: 44 SLSVVINAGSRY-QP-DAGVSHLLEKFAFKTTEER-SALRITRESELLGGQLSTQITREH 100
Query: 146 FIYAASAATSGLDTVMKILGDVVLRPKF-----SKEEINMARQTIQFELENYQMRPEQET 200
I A L+ ++L +VV KF ++E + AR +E+ R +
Sbjct: 101 IILTARFLNEYLEYYARLLAEVVDATKFLPFQLTEEVLPTAR------IESELFREDILR 154
Query: 201 LLMDMIHAAAYK---DNTLGLPKLCPPA 225
+ M +H A+ N + LP P+
Sbjct: 155 VAMAKLHEKAFHRGIGNEVYLPASASPS 182
>sp|O60044|QCR2_NEUCR Cytochrome b-c1 complex subunit 2, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=qcr-2 PE=2 SV=2
Length = 454
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 72 GLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLE 131
G++VAS + G + V+ +G+RYE P P G++ LE+ AF +T++ I + E
Sbjct: 46 GVKVASRDDSGPTTRLAVVAKAGTRYE-PLP-GLTVGLEEFAFKNTNKRTALR-ITRESE 102
Query: 132 KIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFELEN 191
+GG +R+ + AS L ++L +V+ K++ E + + ++ +
Sbjct: 103 LLGGQLQAYHTREAVVLQASFLREDLPYFTELLAEVISETKYTTHEFH---ELVENCIHE 159
Query: 192 YQMRPEQETLLMDMIHAAAYKDNTLGLP 219
Q + + + +D H A+ LG P
Sbjct: 160 KQAKLDSAAIALDAAHNVAFHSG-LGSP 186
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,889,156
Number of Sequences: 539616
Number of extensions: 3749762
Number of successful extensions: 13613
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 13449
Number of HSP's gapped (non-prelim): 116
length of query: 239
length of database: 191,569,459
effective HSP length: 114
effective length of query: 125
effective length of database: 130,053,235
effective search space: 16256654375
effective search space used: 16256654375
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)