BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8069
(466 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q04499|PROD_DROME Proline dehydrogenase 1, mitochondrial OS=Drosophila melanogaster
GN=slgA PE=1 SV=2
Length = 681
Score = 317 bits (812), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 153/243 (62%), Positives = 190/243 (78%), Gaps = 3/243 (1%)
Query: 4 ATYGTGITAIKLTALGRPQLLLQLSEVIMRARKFTSEIMGGRGNVIGQNLTQETLEQRLQ 63
AT+GTGITAIKLTALGRPQLLLQLSEVIMR RK+ +++GG+GNV+ + T + LE+
Sbjct: 298 ATFGTGITAIKLTALGRPQLLLQLSEVIMRTRKYMEDMVGGQGNVLTHHKTIKDLEKYYA 357
Query: 64 QAGIT-DTKKFLEKVTKDAQGVIHLFPWSGLLDVDSNLSDTFRVPCLKEKRMVRLLSQLS 122
G D K+FL VT D +G++HLFPWSG++D DS LSDTFRVP + +M RL+SQ+
Sbjct: 358 TLGDNKDVKEFLNNVTSDKEGILHLFPWSGIVDEDSQLSDTFRVPDPQTGQMRRLISQIP 417
Query: 123 KKEEEMFRNMVRRLNTLVRTAKELDVRIMIDAEQTYFQPAISRLTMELMQKYNSEKAIVF 182
KEEEMFRNM+RRLNT+V+ A +LDVRIM+DAEQTYFQPAISR+T+E+M+KYN +KAIVF
Sbjct: 418 PKEEEMFRNMIRRLNTIVKAAADLDVRIMVDAEQTYFQPAISRITLEMMRKYNKDKAIVF 477
Query: 183 NTYQCYLRDTLNEVITDLNQAKRQKFYFGAKLVRGAYIEQVSQNQSVKTSGSVKTLNYIV 242
NTYQCYLR+T EV TDL QAKRQ FYFGAKLVRGAY++Q + K+ G +N
Sbjct: 478 NTYQCYLRETFREVNTDLEQAKRQNFYFGAKLVRGAYMDQ--ERDRAKSLGYPDPVNPTF 535
Query: 243 ETS 245
E +
Sbjct: 536 EAT 538
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/143 (58%), Positives = 96/143 (67%), Gaps = 30/143 (20%)
Query: 346 ATCERNVEIFQDC----------------------LHAVADIGISPEDKVICFGQLLGMC 383
+ C R +++ +DC + + +IGISPEDKVICFGQLLGMC
Sbjct: 547 SECLRRIKLMKDCDDDARKIGIMVASHNEDTVRFAIQQMKEIGISPEDKVICFGQLLGMC 606
Query: 384 DYITFPLGQAGYSAYKYIPYGPVNRKSIGKIIEVLPYLSRRATENKGVLEKISKEKKLLR 443
DYITFPLGQAGYSAYKYIPYGPV EVLPYLSRRA ENKGVL+KI KEK+LL
Sbjct: 607 DYITFPLGQAGYSAYKYIPYGPVE--------EVLPYLSRRAQENKGVLKKIKKEKRLLL 658
Query: 444 QEILRRIKSGKLFYTPKGHYTPI 466
EI RR+ G+LFY PKG+Y PI
Sbjct: 659 SEIRRRLMRGQLFYKPKGNYVPI 681
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 49/63 (77%), Gaps = 5/63 (7%)
Query: 307 VETSAEKIG-----GELPQYHVAKSFADRRYKVSSARTYFYLNEATCERNVEIFQDCLHA 361
VE+S G G +PQYHV KSFADRRYKVSSARTYFYLNEATCERN+EIF CL A
Sbjct: 223 VESSVSSAGDKKEEGSMPQYHVDKSFADRRYKVSSARTYFYLNEATCERNMEIFIKCLEA 282
Query: 362 VAD 364
V+D
Sbjct: 283 VSD 285
>sp|O45228|PROD_CAEEL Proline dehydrogenase 1, mitochondrial OS=Caenorhabditis elegans
GN=B0513.5 PE=3 SV=2
Length = 616
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 146/223 (65%), Gaps = 5/223 (2%)
Query: 4 ATYGTGITAIKLTALGRPQLLLQLSEVIMRARKFTSEIMGGRGNVIGQNLTQETLEQRLQ 63
AT G A+K+TALGRPQLLL+LSE I++ + F + GG G+ LT + +RL
Sbjct: 239 ATKNEGFVAVKITALGRPQLLLKLSEAIVQTQNFFKALTGGMSLQEGR-LTSQEFYKRLG 297
Query: 64 QAGI-TDT---KKFLEKVTKDAQGVIHLFPWSGLLDVDSNLSDTFRVPCLKEKRMVRLLS 119
+ G+ TDT KKF ++V D+ G++ L W+ +LD L F+V +K + L+
Sbjct: 298 ELGVKTDTESVKKFFDEVDFDSDGIVDLHGWNHILDDHVKLGQLFQVLNIKTGSLEPLIQ 357
Query: 120 QLSKKEEEMFRNMVRRLNTLVRTAKELDVRIMIDAEQTYFQPAISRLTMELMQKYNSEKA 179
LS +EE+ FRNMVRR + A E VRIM+DAEQTY QPAIS++T+E+M+KYN +
Sbjct: 358 NLSNEEEQEFRNMVRRTLDVAEYAIEKGVRIMVDAEQTYLQPAISKITIEMMKKYNKGRG 417
Query: 180 IVFNTYQCYLRDTLNEVITDLNQAKRQKFYFGAKLVRGAYIEQ 222
+FNTYQ YL+ TL + D+ A+R+ ++FGAKLVRGAY+EQ
Sbjct: 418 NIFNTYQAYLKGTLQNMEADMQVARREGWHFGAKLVRGAYMEQ 460
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 71/105 (67%), Gaps = 8/105 (7%)
Query: 351 NVEIFQDCLHAVADIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVNRKS 410
N + + L+ + + ISP ++V+C QL GMCD ++F LGQAG+S YKY+PYGPV
Sbjct: 512 NEDTVRFALNLMKEKCISPSERVMCMAQLYGMCDQVSFSLGQAGFSVYKYLPYGPVE--- 568
Query: 411 IGKIIEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKL 455
EVLPYLSRRA EN VL+K +KE+ LL +E+ RRI SG+
Sbjct: 569 -----EVLPYLSRRALENGSVLKKANKERDLLWKELKRRISSGEF 608
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 320 QYHVAKSFADRRYKVSSARTYFYLNEATCERNVEIFQDCLHAVA 363
+Y V + F DRR VSSARTYFY E C++N +IF+D ++AVA
Sbjct: 194 RYTVHEEFGDRRQGVSSARTYFYEGEEQCDKNRDIFKDSINAVA 237
>sp|Q148G5|PROD_BOVIN Proline dehydrogenase 1, mitochondrial OS=Bos taurus GN=PRODH PE=2
SV=1
Length = 593
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 155/257 (60%), Gaps = 18/257 (7%)
Query: 9 GITAIKLTALGRPQLLLQLSEVIMRARKFTSEIMGGRGNV----IGQNLTQETLEQRLQQ 64
G +AIKLTALGRPQ LLQ S+++ + R+F + +G + L L++ + +
Sbjct: 229 GFSAIKLTALGRPQFLLQFSDMLTKWRRFFHHVAAEQGKAGLAAVDTKLEVAALQESVVK 288
Query: 65 AGITDTKKFLEKVTKDAQGV---IHLFPWSGLLDVDSNLSDTFRVPCLKEKRMVRLLSQL 121
GI + + T + GV + L W L+D + LS VP ++ R+ LLSQ
Sbjct: 289 MGIASRAEIEDWFTAETLGVSGTLDLLDWCSLIDSRTELSRHLVVPNMQTGRLEPLLSQF 348
Query: 122 SKKEEEMFRNMVRRLNTLVRTAKELDVRIMIDAEQTYFQPAISRLTMELMQKYNSEKAIV 181
+++EE M++R++ L + A ++ VR+M+DAEQTYFQPAISRLT+E+ +++N E+ ++
Sbjct: 349 TEEEERQMTRMLQRMDVLAKKANQVGVRLMVDAEQTYFQPAISRLTLEMQRRFNVERPLI 408
Query: 182 FNTYQCYLRDTLNEVITDLNQAKRQKFYFGAKLVRGAYIEQVSQNQSVKTSGSVKTLNYI 241
FNT+QCYLRD + VI D+ A+R+ + FGAKLVRGAY+ QV G +N
Sbjct: 409 FNTFQCYLRDAYDNVILDVELARREGWCFGAKLVRGAYMAQV---------GYEDPINPT 459
Query: 242 VETSGSV--KTLNYIVE 256
E + +V + L+Y++E
Sbjct: 460 YEATSAVYHRCLDYVLE 476
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 8/101 (7%)
Query: 359 LHAVADIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVNRKSIGKIIEVL 418
L + ++G+ P D+ + FGQLLGMCD+I+FPLGQAG+ YKY+PYGPV +EVL
Sbjct: 500 LRRMEELGLHPADRQVYFGQLLGMCDHISFPLGQAGFPVYKYVPYGPV--------MEVL 551
Query: 419 PYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYTP 459
PYLSRRA EN GV++ +E++LL QE+ RR+ + LF+ P
Sbjct: 552 PYLSRRALENSGVMKGAQRERQLLWQELKRRLCTRSLFHQP 592
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 300 MKTLNYIVETSAEKIGGELPQYHVAKSFADRRYKVSSARTYFYLNEATCERNVEIFQDCL 359
M++ + +E + Q+ ++F DRR V+SARTYFY +EA C+ ++E F C+
Sbjct: 160 MESCSSALERDGCGVSKREKQFQAHRAFGDRRDGVTSARTYFYASEAKCDSHMETFLHCI 219
Query: 360 HA 361
A
Sbjct: 220 EA 221
>sp|Q9WU79|PROD_MOUSE Proline dehydrogenase 1, mitochondrial OS=Mus musculus GN=Prodh
PE=2 SV=2
Length = 599
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 158/259 (61%), Gaps = 15/259 (5%)
Query: 9 GITAIKLTALGRPQLLLQLSEVIMRARKFTSEIMGGRGNV----IGQNLTQETLEQRLQQ 64
G +AIKLTALGRPQ LLQ S+V+ R R+F ++ +G + L L+ + +
Sbjct: 228 GFSAIKLTALGRPQFLLQFSDVLTRWRRFFHQMAAEQGQAGRAAVDTKLEVAVLQDSIAK 287
Query: 65 AGIT---DTKKFLEKVTKDAQGVIHLFPWSGLLDVDSNLSDTFRVPCLKEKRMVRLLSQL 121
GI + + + T G + L W+ L+D + LS VP ++ ++ LLS+
Sbjct: 288 MGIASRAEIEGWFTPETLGVSGTVDLLDWNSLIDSRTRLSRHLVVPNVQTGQLEPLLSRF 347
Query: 122 SKKEEEMFRNMVRRLNTLVRTAKELDVRIMIDAEQTYFQPAISRLTMELMQKYNSEKAIV 181
+++EE+ + M++R++ L + AKE VR+MIDAEQ+YFQPAISRLT+E+ +++N +K +
Sbjct: 348 TEEEEQQMKRMLQRMDVLAKKAKEAGVRLMIDAEQSYFQPAISRLTLEMQRRFNVDKPFI 407
Query: 182 FNTYQCYLRDTLNEVITDLNQAKRQKFYFGAKLVRGAYIEQVSQNQSVKTS--GSVKTLN 239
FNT+QCYL+D + V D+ A+R+ + FGAKLVRGAY+ Q + V+ + G +N
Sbjct: 408 FNTFQCYLKDAYDNVTLDMELARREGWCFGAKLVRGAYMAQ----ERVRAAEIGYEDPIN 463
Query: 240 YIVETSGSV--KTLNYIVE 256
E + ++ + LNY++E
Sbjct: 464 PTYEATNAMYHRCLNYVLE 482
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
Query: 364 DIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVNRKSIGKIIEVLPYLSR 423
+IG+ P D +CFGQLLGMCD I+FPLGQAG+ YKY+PYGPV +EVLPYLSR
Sbjct: 511 EIGLHPADGQVCFGQLLGMCDQISFPLGQAGFPVYKYVPYGPV--------MEVLPYLSR 562
Query: 424 RATENKGVLEKISKEKKLLRQEILRRIKSGKLFYTP 459
RA EN +++ +E++LL QE+ RR+++G LF+ P
Sbjct: 563 RALENSSIMKGAQRERQLLWQELRRRLRTGSLFHHP 598
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 320 QYHVAKSFADRRYKVSSARTYFYLNEATCERNVEIFQDCLHA---VADIGIS 368
QY V +F DRR V SARTYFY NEA C+ +E C+ A +D G S
Sbjct: 179 QYQVHPAFGDRRDGVISARTYFYANEAKCDNYMENLLQCIKASGGASDGGFS 230
>sp|O43272|PROD_HUMAN Proline dehydrogenase 1, mitochondrial OS=Homo sapiens GN=PRODH
PE=1 SV=3
Length = 600
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 153/257 (59%), Gaps = 11/257 (4%)
Query: 9 GITAIKLTALGRPQLLLQLSEVIMRARKFTSEIMGGRGNV----IGQNLTQETLEQRLQQ 64
G AIKLTALGRPQ LLQ SEV+ + R F ++ +G + L L++ + +
Sbjct: 229 GFIAIKLTALGRPQFLLQFSEVLAKWRCFFHQMAVEQGQAGLAAMDTKLEVAVLQESVAK 288
Query: 65 AGITDTKKFLEKVTKDAQGV---IHLFPWSGLLDVDSNLSDTFRVPCLKEKRMVRLLSQL 121
GI + + T + GV + L WS L+D + LS VP + ++ LLS+
Sbjct: 289 LGIASRAEIEDWFTAETLGVSGTMDLLDWSSLIDSRTKLSKHLVVPNAQTGQLEPLLSRF 348
Query: 122 SKKEEEMFRNMVRRLNTLVRTAKELDVRIMIDAEQTYFQPAISRLTMELMQKYNSEKAIV 181
+++EE M++R++ L + A E+ VR+M+DAEQTYFQPAISRLT+E+ +K+N EK ++
Sbjct: 349 TEEEELQMTRMLQRMDVLAKKATEMGVRLMVDAEQTYFQPAISRLTLEMQRKFNVEKPLI 408
Query: 182 FNTYQCYLRDTLNEVITDLNQAKRQKFYFGAKLVRGAYIEQVSQNQSVKTSGSVKTLNYI 241
FNTYQCYL+D + V D+ A+R+ + FGAKLVRGAY+ Q + G +N
Sbjct: 409 FNTYQCYLKDAYDNVTLDVELARREGWCFGAKLVRGAYLAQ--ERARAAEIGYEDPINPT 466
Query: 242 VETSGSV--KTLNYIVE 256
E + ++ + L+Y++E
Sbjct: 467 YEATNAMYHRCLDYVLE 483
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 75/109 (68%), Gaps = 8/109 (7%)
Query: 351 NVEIFQDCLHAVADIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVNRKS 410
N + + L + ++G+ P D + FGQLLGMCD I+FPLGQAGY YKY+PYGPV
Sbjct: 499 NEDTVRFALRRMEELGLHPADHQVYFGQLLGMCDQISFPLGQAGYPVYKYVPYGPV---- 554
Query: 411 IGKIIEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYTP 459
+EVLPYLSRRA EN +++ +E++LL E+LRR+++G LF+ P
Sbjct: 555 ----MEVLPYLSRRALENSSLMKGTHRERQLLWLELLRRLRTGNLFHRP 599
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 320 QYHVAKSFADRRYKVSSARTYFYLNEATCERNVEIFQDCLHA---VADIGI 367
QY ++F DRR V SARTYFY NEA C+ ++E F C+ A V+D G
Sbjct: 180 QYQAHRAFGDRRNGVISARTYFYANEAKCDSHMETFLRCIEASGRVSDDGF 230
>sp|Q6PAY6|PROD2_XENLA Probable proline dehydrogenase 2 OS=Xenopus laevis GN=prodh2 PE=2
SV=1
Length = 466
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 68/105 (64%)
Query: 118 LSQLSKKEEEMFRNMVRRLNTLVRTAKELDVRIMIDAEQTYFQPAISRLTMELMQKYNSE 177
S LS+ E RN VRRL+ + + A VR+++DAE TY PA+S +TM +M + N
Sbjct: 216 FSFLSEGENSHLRNSVRRLSRIAKHATANRVRVLVDAEYTYMNPALSLVTMAMMSQCNQS 275
Query: 178 KAIVFNTYQCYLRDTLNEVITDLNQAKRQKFYFGAKLVRGAYIEQ 222
+ ++NTYQCYL+D+ + + DL+ A+ FG KLVRGAY+++
Sbjct: 276 EPWIWNTYQCYLKDSFSLLSLDLDTARSLGLCFGVKLVRGAYMDK 320
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 53/83 (63%), Gaps = 11/83 (13%)
Query: 359 LHAV---ADIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVNRKSIGKII 415
LHAV A++GI + FGQLLGMCD+++ LGQAGY YK +PYG V+
Sbjct: 376 LHAVTRMAELGIDKGSGSVSFGQLLGMCDHVSLTLGQAGYLVYKSLPYGSVD-------- 427
Query: 416 EVLPYLSRRATENKGVLEKISKE 438
VLPYL RRA EN+ VL+ I KE
Sbjct: 428 SVLPYLIRRAQENQSVLQGIRKE 450
>sp|Q9UF12|PROD2_HUMAN Probable proline dehydrogenase 2 OS=Homo sapiens GN=PRODH2 PE=2
SV=1
Length = 536
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 9/90 (10%)
Query: 364 DIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVNRKSIGKIIEVLPYLSR 423
++GI P D +CFGQLLGMCD+++ LGQAGY YK IPY G + EV+PYL R
Sbjct: 450 ELGI-PLDGTVCFGQLLGMCDHVSLALGQAGYVVYKSIPY--------GSLEEVIPYLIR 500
Query: 424 RATENKGVLEKISKEKKLLRQEILRRIKSG 453
RA EN+ VL+ +E++LL QE+ RR+ G
Sbjct: 501 RAQENRSVLQGARREQELLSQELWRRLLPG 530
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 118 LSQLSKKEEEMFRNMVRRLNTLVRTAKELDVRIMIDAEQTYFQPAISRLTMELMQKYNSE 177
+S L+ ++ + R + RL+ + + A+ VR+++DAE T PA+S L L ++NS
Sbjct: 279 VSCLNAEQNQHLRASLSRLHRVAQYARAQHVRLLVDAEYTSLNPALSLLVAALAVRWNSP 338
Query: 178 K---AIVFNTYQCYLRDTLNEVITDLNQAKRQKFYFGAKLVRGAYIEQ 222
V+NTYQ L+DT + D A R FG KLVRGAY+++
Sbjct: 339 GEGGPWVWNTYQACLKDTFERLGRDAEAAHRAGLAFGVKLVRGAYLDK 386
>sp|Q2V057|PROD2_RAT Probable proline dehydrogenase 2 OS=Rattus norvegicus GN=Prodh2
PE=2 SV=1
Length = 456
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 9/100 (9%)
Query: 351 NVEIFQDCLHAVADIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVNRKS 410
N E + + ++GI P D +CFGQLLGMCD+++ LGQAGY YK IPYG +
Sbjct: 361 NEESIRQATRRMWELGI-PLDGPVCFGQLLGMCDHVSLALGQAGYMVYKSIPYGCLE--- 416
Query: 411 IGKIIEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRI 450
EV+PYL RRA EN+ VL+ +E+ LL QE+ RR+
Sbjct: 417 -----EVIPYLIRRAQENRSVLQGARREQALLSQELWRRL 451
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 118 LSQLSKKEEEMFRNMVRRLNTLVRTAKELDVRIMIDAEQTYFQPAISRLTMELMQKYNS- 176
LS LS ++ + + + RL+ + + A+ DVR+++DAE T+ PA+S L L + +S
Sbjct: 203 LSCLSTEQNQHLQASLSRLHRVAQHARAQDVRLLVDAEYTFINPALSLLVAALAMRLDSS 262
Query: 177 --EKAIVFNTYQCYLRDTLNEVITDLNQAKRQKFYFGAKLVRGAYIEQ 222
E V+NTYQ YL+DT + D A FG KLVRGAY+++
Sbjct: 263 EEEGPWVWNTYQAYLKDTHERLERDAKAAHEAGLAFGVKLVRGAYLDK 310
>sp|Q8VCZ9|PROD2_MOUSE Probable proline dehydrogenase 2 OS=Mus musculus GN=Prodh2 PE=2
SV=1
Length = 456
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 59/87 (67%), Gaps = 9/87 (10%)
Query: 364 DIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVNRKSIGKIIEVLPYLSR 423
++GI P D +CFGQLLGMCD+++ LGQAGY YK IPYG + EV+PYL R
Sbjct: 374 ELGI-PLDGPVCFGQLLGMCDHVSLALGQAGYMVYKSIPYGCLE--------EVIPYLIR 424
Query: 424 RATENKGVLEKISKEKKLLRQEILRRI 450
RA EN+ VL+ +E+ LL QE+ RR+
Sbjct: 425 RAQENRSVLQGARREQALLSQELWRRL 451
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 118 LSQLSKKEEEMFRNMVRRLNTLVRTAKELDVRIMIDAEQTYFQPAISRLTMELMQKYNSE 177
LS LS ++ + + + RL+ + + A+ VR+++DAE T+ PA+S L L ++NS
Sbjct: 203 LSCLSTEQNQHLQASLSRLHRVAQHARAKCVRLLVDAEYTFINPALSLLVAALAVRWNSP 262
Query: 178 K---AIVFNTYQCYLRDTLNEVITDLNQAKRQKFYFGAKLVRGAYIEQ 222
+ V+NTYQ YL+DT + D A + FG KLVRGAY+++
Sbjct: 263 EEGGPWVWNTYQAYLKDTHQRLEQDAEAAHKAGLAFGVKLVRGAYLDK 310
>sp|A6QQ74|PROD2_BOVIN Probable proline dehydrogenase 2 OS=Bos taurus GN=PRODH2 PE=2 SV=1
Length = 461
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 364 DIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVNRKSIGKIIEVLPYLSR 423
++GI P D +CFGQLLGMCD+++ LGQAGY+ YK IPY G + EV+PYL R
Sbjct: 374 ELGIPP-DGPVCFGQLLGMCDHVSLALGQAGYAVYKSIPY--------GSLEEVIPYLIR 424
Query: 424 RATENKGVLEKISKEKKLLRQE 445
RA EN+ VL +E++LL QE
Sbjct: 425 RAQENRSVLRGARREQELLSQE 446
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 118 LSQLSKKEEEMFRNMVRRLNTLVRTAKELDVRIMIDAEQTYFQPAISRLTMELMQKYNSE 177
+S L+ ++ + + RL+ +V+ A+ VR+++DAE T PA+S L L ++NS
Sbjct: 203 VSCLNTEQTRHLQASLSRLHRVVQHARAQRVRLLVDAEYTSLNPALSLLVAALATRWNSS 262
Query: 178 K---AIVFNTYQCYLRDTLNEVITDLNQAKRQKFYFGAKLVRGAYIEQ 222
V+NTYQ YL+DT + D A R FG KLVRGAY+++
Sbjct: 263 GEGGPWVWNTYQAYLKDTYERLRWDAEAADRAGLAFGVKLVRGAYLDK 310
>sp|Q86H28|PROD_DICDI Proline dehydrogenase 1, mitochondrial OS=Dictyostelium discoideum
GN=prodh PE=3 SV=1
Length = 572
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 121 LSKKEEEMFRNMVRRLNTLVRTAKELDVRIMIDAEQTYFQPAISRLTMELMQKYNSEKAI 180
L+ K+ + + R++ + + + V I++DAEQ+Y+Q AI LTM KYN EK I
Sbjct: 325 LTSKDIKEIKEFFNRMDKIFQLCHQRGVPILVDAEQSYYQVAIHHLTMSYSIKYNKEKPI 384
Query: 181 VFNTYQCYLRDTLNEVITDLNQAKRQKFYF--GAKLVRGAYI 220
++NTYQ YL + +N + + QKF F GAK+VRGAY+
Sbjct: 385 IYNTYQMYLVNGMNVLKQHFELSSSQKFNFKLGAKIVRGAYM 426
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 367 ISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVNRKSIGKIIEVLPYLSRRAT 426
I P + I FGQL GM D+++F L +KY+P+GPV EVLPYL RR
Sbjct: 495 IDPTNPNIQFGQLFGMADFLSFNLVDQHQRIFKYVPFGPVE--------EVLPYLIRRMH 546
Query: 427 ENKGVLEKIS-KEKKLLRQEILRRI 450
ENKG + S KE L++EI RR+
Sbjct: 547 ENKGFIGSNSDKELFYLKKEIKRRL 571
>sp|Q9XB58|CARD_PECCC Carbapenem antibiotics biosynthesis protein CarD OS=Pectobacterium
carotovorum subsp. carotovorum GN=carD PE=3 SV=1
Length = 376
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 61/102 (59%)
Query: 121 LSKKEEEMFRNMVRRLNTLVRTAKELDVRIMIDAEQTYFQPAISRLTMELMQKYNSEKAI 180
L + + +V R + L A+ V +M+DAEQT QPA+ RL +++M+++N + A+
Sbjct: 142 LDEASASAWSRIVTRFSRLFDYARSHGVHVMVDAEQTAIQPAVDRLVLDMMREFNRDSAV 201
Query: 181 VFNTYQCYLRDTLNEVITDLNQAKRQKFYFGAKLVRGAYIEQ 222
+ T Q YL+D L + +A + F FG K+VRGAY+E+
Sbjct: 202 ITLTLQFYLKDQLRFLDECYQRACQDNFLFGVKVVRGAYLEE 243
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 377 GQLLGMCDYITFPLGQAGYSAYKYIPYGPVNRKSIGKIIEVLPYLSRRATENKGVLEKIS 436
GQL G+ D+IT+ L Q G+ KY+PYGP+++ LPYL RR EN
Sbjct: 307 GQLYGLGDHITYSLLQTGFRVCKYLPYGPLDKS--------LPYLLRRIEENAVASATFK 358
Query: 437 KEKKLLRQEILRRIKSG 453
KE KLL++E+LRR+ G
Sbjct: 359 KENKLLQKELLRRLVGG 375
>sp|O74524|PROD_SCHPO Probable proline dehydrogenase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC70.03c PE=3 SV=1
Length = 492
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%)
Query: 120 QLSKKEEEMFRNMVRRLNTLVRTAKELDVRIMIDAEQTYFQPAISRLTMELMQKYNSEKA 179
+LS E + + L + AKE + + IDAEQTYFQ + +T++LM+KYN E A
Sbjct: 234 ELSTYEVSELKKFWEYADKLCQFAKEKQIPLFIDAEQTYFQDCMHAVTVDLMRKYNKEVA 293
Query: 180 IVFNTYQCYLRDTLNEVITDLNQAKRQKFYFGAKLVRGAYI 220
IV NTYQ YL+ + + + + + + GAKLVRGAY+
Sbjct: 294 IVHNTYQLYLKKSRKIMDDHIKKCVAEGWLMGAKLVRGAYL 334
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 14/80 (17%)
Query: 377 GQLLGMCDYITFPLG------QAGYSAYKYIPYGPVNRKSIGKIIEVLPYLSRRATENKG 430
QLLGM D IT+ L Q + KY+ GP++ EVLPYL RRA EN
Sbjct: 420 AQLLGMADDITYALAYSQRNQQPNFCIVKYVSCGPIS--------EVLPYLVRRARENID 471
Query: 431 VLEKISKEKKLLRQEILRRI 450
L++ +E+ RQ + RRI
Sbjct: 472 ALDRCKEERAYYRQALRRRI 491
>sp|Q6NKX1|PROD2_ARATH Proline dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana
GN=POX2 PE=2 SV=1
Length = 476
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 59/89 (66%), Gaps = 8/89 (8%)
Query: 362 VADIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVNRKSIGKIIEVLPYL 421
+++GI+ E+ I F QL GM D ++F L +AG++ KY+PYGPV+ +PYL
Sbjct: 393 ASELGINKENGKIEFAQLYGMSDALSFGLKRAGFNVSKYMPYGPVD--------TAIPYL 444
Query: 422 SRRATENKGVLEKISKEKKLLRQEILRRI 450
RRA EN+G++ + +++L+R+E+ RR+
Sbjct: 445 IRRAYENRGMMSTGALDRQLMRKELKRRV 473
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 121 LSKKEEEMFRNMVRRLNTLVRTAKELDVRIMIDAEQTYFQPAISRLTMELMQKYNSEK-- 178
L+ +EE RL ++ +E +V ++IDAE T QPAI + +NS+K
Sbjct: 229 LTVEEERELEKAHERLKSVCLRCQESNVPLLIDAEDTILQPAIDYMAYWSAIMFNSDKDR 288
Query: 179 AIVFNTYQCYLRDTLNEVITDLNQAKRQKFYFGAKLVRGAYI 220
IV+NT Q YL+D + L ++++ G KLVRGAY+
Sbjct: 289 PIVYNTIQAYLKDAGERLHLALRESEKMNVPIGFKLVRGAYM 330
>sp|P92983|PROD1_ARATH Proline dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana
GN=POX1 PE=1 SV=2
Length = 499
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 58/92 (63%), Gaps = 8/92 (8%)
Query: 362 VADIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVNRKSIGKIIEVLPYL 421
+D+GI ++ I F QL GM D ++F L +AG++ KY+P+GPV +PYL
Sbjct: 414 ASDLGIDKQNGKIEFAQLYGMSDALSFGLKRAGFNVSKYMPFGPV--------ATAIPYL 465
Query: 422 SRRATENKGVLEKISKEKKLLRQEILRRIKSG 453
RRA EN+G++ + +++L+R E+ RR+ +G
Sbjct: 466 LRRAYENRGMMATGAHDRQLMRMELKRRLIAG 497
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 135 RLNTLVRTAKELDVRIMIDAEQTYFQPAISRLTMELMQKYNSEK--AIVFNTYQCYLRDT 192
R+ + R +E +V ++IDAE T QPAI + +N++K IV+NT Q YLRD
Sbjct: 264 RIQEICRKCQESNVPLLIDAEDTILQPAIDYMAYSSAIMFNADKDRPIVYNTIQAYLRDA 323
Query: 193 LNEVITDLNQAKRQKFYFGAKLVRGAYI 220
+ + A+++ G KLVRGAY+
Sbjct: 324 GERLHLAVQNAEKENVPMGFKLVRGAYM 351
>sp|P09368|PUT1_YEAST Proline dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PUT1 PE=1 SV=2
Length = 476
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 81 AQGVIHLFPWSGLLDVDSNLSDTFRVPCLKEKRMVRLLSQLSKKEEEMFRNMVRRLN-TL 139
A G I L P S L+D + F P K +R +L+ SK +E+F LN +L
Sbjct: 188 APGYIALKP-SALVDNPHEVLYNFSNPAYKAQRD-QLIENCSKITKEIFE-----LNQSL 240
Query: 140 VRTAKELDVRIM---IDAEQTYFQP-AISRLTMELMQKYN--SEKAI-VFNTYQCYLRDT 192
++ E M IDAE+ Q + L L QK+N S K I T+Q YLRD+
Sbjct: 241 LKKYPERKAPFMVSTIDAEKYDLQENGVYELQRILFQKFNPTSSKLISCVGTWQLYLRDS 300
Query: 193 LNEVITDLNQAKRQKFYFGAKLVRGAYIE 221
+ ++ +L A+ + G KLVRGAYI
Sbjct: 301 GDHILHELKLAQENGYKLGLKLVRGAYIH 329
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 10/57 (17%)
Query: 374 ICFGQLLGMCDYITFPL--GQAGYSAYKYIPYGPVNRKSIGKIIEVLPYLSRRATEN 428
I GQLLGM D +T+ L + KY+P+GP +E YL RR EN
Sbjct: 402 IVLGQLLGMADNVTYDLITNHGAKNIIKYVPWGPP--------LETKDYLLRRLQEN 450
>sp|Q00647|MYO1_EMENI Myosin-1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS
112.46 / NRRL 194 / M139) GN=myoA PE=1 SV=2
Length = 1249
Score = 35.4 bits (80), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 230 KTSGSVKTLNYIVETSGSVKTLNYIVETSGSVKTLNYIVETSGSVKTL-NYIVETSGSVK 288
KT + + + YI SG + I +T V N ++E+ G+ KTL N G
Sbjct: 149 KTEAAKRIMQYIASVSGGSDS--SIQQTKDMVLATNPLLESFGNAKTLRNNNSSRFGKYL 206
Query: 289 TLNYIV--ETSGSMKTLNYIVETSAEKIGGELPQ---YHVAKSFA---DRRYK----VSS 336
L + E G+ T NY++E S ++ G++ +H+ FA ++Y+ V
Sbjct: 207 ELEFNAQGEPVGANIT-NYLLEKS--RVVGQITNERNFHIFYQFAKGAPQKYRDSFGVQQ 263
Query: 337 ARTYFYLNEATC-----ERNVEIFQDCLHAVADIGISPEDKVICFGQLLGM 382
++Y Y + + C +V FQD L+A++ IG+S ++ F L +
Sbjct: 264 PQSYLYTSRSKCFDVPGVDDVAEFQDTLNAMSVIGMSEAEQDNVFRMLAAI 314
>sp|A4YE96|SYL1_METS5 Leucine--tRNA ligase 1 OS=Metallosphaera sedula (strain ATCC 51363
/ DSM 5348) GN=leuS1 PE=3 SV=1
Length = 938
Score = 35.4 bits (80), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 109 LKEKRMVRLLSQLSKKEEEMFRNMVRRLNTLVRTAKELDVRIMIDAEQTY---FQPAISR 165
LKE++ +R LS ++ + EE R++V R+ +L +EL V +D +T + R
Sbjct: 843 LKERKNLRELSSITGQREEYLRSLVERVQSLPPILRELIVTYPLDEFKTITDNLNFLVRR 902
Query: 166 LTMELMQKYNSEKA 179
L ++ +Q Y S++A
Sbjct: 903 LDVDEIQVYRSDEA 916
>sp|A4RE77|MYO1_MAGO7 Myosin-1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC
8958) GN=MYO1 PE=3 SV=1
Length = 1212
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 23/165 (13%)
Query: 230 KTSGSVKTLNYIVETSGSVKTLNYIVETSGSVKTLNYIVETSGSVKTL-NYIVETSGSVK 288
KT + + + YI SG T I + V N ++E+ G+ KTL N G
Sbjct: 140 KTEAAKRIMQYIASVSGGDST--DIQQIKDMVLATNPLLESFGNAKTLRNNNSSRFGKYL 197
Query: 289 TLNY--IVETSGSMKTLNYIVETSAEKIGGELPQ---YHVAKSF---ADRRYK----VSS 336
+++ + E G+ T NY++E S ++ G++ +H+ F A Y+ +
Sbjct: 198 QIHFNSVGEPVGADIT-NYLLEKS--RVVGQITNERNFHIFYQFTKGASEHYRQMFGIQK 254
Query: 337 ARTYFYLNEATCER-----NVEIFQDCLHAVADIGISPEDKVICF 376
TY Y + + C ++ FQD L+A+ IG+S E++ F
Sbjct: 255 PETYIYTSRSKCLDVDGIDDLAEFQDTLNAMKVIGLSQEEQDSVF 299
>sp|P34092|MYOB_DICDI Myosin IB heavy chain OS=Dictyostelium discoideum GN=myoB PE=1 SV=2
Length = 1111
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 22/160 (13%)
Query: 230 KTSGSVKTLNYIVETSGSVKTLNYIVETSGSVKTLNYIVETSGSVKTLNYIVETSGSVKT 289
KT + + Y+ SGS + + Y+ + N ++E G+ KTL +S K
Sbjct: 108 KTEAAKLIMGYVSAISGSTEKVEYVKHV---ILESNPLLEAFGNAKTLRN-NNSSRFGKY 163
Query: 290 LNYIVETSGSM---KTLNYIVETS--AEKIGGELPQYHV-------AKSFADRRYKVSSA 337
+ +G K NY++E S + GE +H+ A + R Y +SS
Sbjct: 164 FEIQFDKAGDPVGGKIYNYLLEKSRVVYQNPGER-NFHIFYQLLAGASAQEKRDYVLSSP 222
Query: 338 RTYFYLNEATCE-----RNVEIFQDCLHAVADIGISPEDK 372
+Y+YLN++ C +V + + A+ IG++ +++
Sbjct: 223 ESYYYLNQSQCYTVDGINDVSDYAEVRQAMDTIGLTAQEQ 262
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,518,754
Number of Sequences: 539616
Number of extensions: 6296939
Number of successful extensions: 20073
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 19940
Number of HSP's gapped (non-prelim): 119
length of query: 466
length of database: 191,569,459
effective HSP length: 121
effective length of query: 345
effective length of database: 126,275,923
effective search space: 43565193435
effective search space used: 43565193435
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)