Query psy8070
Match_columns 173
No_of_seqs 125 out of 357
Neff 5.4
Searched_HMMs 29240
Date Fri Aug 16 17:38:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8070.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8070hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k87_A PUTA, proline dehydroge 99.6 3.7E-15 1.3E-19 140.1 7.1 128 42-171 198-330 (669)
2 2ekg_A Proline dehydrogenase/d 99.3 1.3E-11 4.5E-16 107.4 8.9 79 91-171 39-120 (327)
3 4h6q_A Proline dehydrogenase; 99.1 1.4E-10 4.8E-15 100.3 8.9 79 91-171 20-101 (312)
4 3e2q_A Proline oxidase, prolin 98.7 1.8E-08 6.1E-13 93.1 6.7 83 88-171 155-245 (551)
5 3haz_A Proline dehydrogenase; 98.6 4E-08 1.4E-12 96.0 6.4 81 90-171 152-240 (1001)
6 4f9i_A Proline dehydrogenase/d 98.4 5.3E-07 1.8E-11 88.4 8.3 62 90-152 124-188 (1026)
7 4gqr_A Pancreatic alpha-amylas 52.3 8.3 0.00028 32.7 2.8 24 109-132 75-98 (496)
8 4aie_A Glucan 1,6-alpha-glucos 40.6 16 0.00054 31.7 2.8 25 109-133 78-102 (549)
9 1ud2_A Amylase, alpha-amylase; 39.3 17 0.00058 31.5 2.8 25 109-133 79-103 (480)
10 1wpc_A Glucan 1,4-alpha-maltoh 39.1 17 0.00059 31.5 2.8 25 109-133 81-105 (485)
11 3bh4_A Alpha-amylase; calcium, 39.0 17 0.00059 31.5 2.8 25 109-133 77-101 (483)
12 1g94_A Alpha-amylase; beta-alp 38.8 18 0.0006 31.2 2.8 25 109-133 63-87 (448)
13 2guy_A Alpha-amylase A; (beta- 38.6 18 0.00061 31.3 2.8 25 109-133 96-120 (478)
14 1ht6_A AMY1, alpha-amylase iso 38.0 19 0.00064 30.7 2.8 24 109-132 67-90 (405)
15 1lwj_A 4-alpha-glucanotransfer 37.9 19 0.00064 30.9 2.8 26 109-134 68-93 (441)
16 1mxg_A Alpha amylase; hyperthe 37.2 19 0.00066 31.0 2.8 25 109-133 85-109 (435)
17 1hvx_A Alpha-amylase; hydrolas 37.2 19 0.00065 31.7 2.8 25 109-133 80-104 (515)
18 1ua7_A Alpha-amylase; beta-alp 37.1 17 0.00057 31.1 2.4 25 109-133 73-97 (422)
19 2z1k_A (NEO)pullulanase; hydro 36.3 20 0.0007 30.8 2.8 26 109-134 95-120 (475)
20 1gcy_A Glucan 1,4-alpha-maltot 36.3 20 0.00069 31.7 2.8 25 109-133 91-115 (527)
21 2aaa_A Alpha-amylase; glycosid 35.4 21 0.00071 31.0 2.7 25 109-133 96-120 (484)
22 1wzl_A Alpha-amylase II; pullu 34.7 21 0.00073 32.0 2.7 25 109-133 218-242 (585)
23 1x60_A Sporulation-specific N- 34.6 15 0.00051 23.9 1.3 31 98-128 43-74 (79)
24 1wza_A Alpha-amylase A; hydrol 33.8 24 0.0008 30.7 2.8 26 109-134 80-105 (488)
25 1j0h_A Neopullulanase; beta-al 33.4 24 0.0008 31.7 2.8 25 109-133 221-245 (588)
26 3f1b_A TETR-like transcription 32.5 36 0.0012 24.3 3.2 20 95-117 46-65 (203)
27 1ea9_C Cyclomaltodextrinase; h 32.2 23 0.00078 31.8 2.5 26 109-134 217-242 (583)
28 4aef_A Neopullulanase (alpha-a 30.7 28 0.00094 31.6 2.8 25 109-133 284-308 (645)
29 3dhu_A Alpha-amylase; structur 30.1 30 0.001 29.6 2.8 25 109-133 82-106 (449)
30 1jae_A Alpha-amylase; glycosid 30.1 26 0.00088 30.4 2.4 25 109-133 73-97 (471)
31 2wc7_A Alpha amylase, catalyti 29.9 24 0.00083 30.6 2.2 26 109-134 101-126 (488)
32 1hjs_A Beta-1,4-galactanase; 4 29.8 1.4E+02 0.0046 24.9 6.8 25 106-130 55-79 (332)
33 1m53_A Isomaltulose synthase; 29.3 30 0.001 30.9 2.8 26 109-134 91-116 (570)
34 1zja_A Trehalulose synthase; s 28.7 32 0.0011 30.6 2.8 26 109-134 78-103 (557)
35 1uok_A Oligo-1,6-glucosidase; 28.7 32 0.0011 30.6 2.8 26 109-134 77-102 (558)
36 1m7x_A 1,4-alpha-glucan branch 28.1 32 0.0011 31.1 2.8 25 109-133 203-227 (617)
37 3aie_A Glucosyltransferase-SI; 27.8 32 0.0011 33.1 2.8 24 109-132 691-714 (844)
38 2dh2_A 4F2 cell-surface antige 27.7 35 0.0012 29.3 2.8 25 109-133 80-104 (424)
39 2ze0_A Alpha-glucosidase; TIM 27.1 35 0.0012 30.3 2.8 26 109-134 77-102 (555)
40 2zic_A Dextran glucosidase; TI 27.1 35 0.0012 30.3 2.7 26 109-134 77-102 (543)
41 1d3c_A Cyclodextrin glycosyltr 26.6 36 0.0012 31.2 2.8 25 109-133 114-138 (686)
42 2bhu_A Maltooligosyltrehalose 26.6 36 0.0012 30.9 2.8 24 109-132 191-214 (602)
43 1gjw_A Maltodextrin glycosyltr 26.4 34 0.0011 31.1 2.6 23 110-132 181-203 (637)
44 3bc9_A AMYB, alpha amylase, ca 26.1 37 0.0013 30.8 2.8 25 109-133 207-231 (599)
45 1uta_A FTSN, MSGA, cell divisi 26.1 32 0.0011 22.6 1.8 30 98-127 43-73 (81)
46 3aj7_A Oligo-1,6-glucosidase; 26.1 37 0.0013 30.5 2.8 26 109-134 86-111 (589)
47 2ya0_A Putative alkaline amylo 26.0 28 0.00095 32.3 2.0 23 110-132 254-276 (714)
48 1cyg_A Cyclodextrin glucanotra 25.5 38 0.0013 30.9 2.8 25 109-133 110-134 (680)
49 1qho_A Alpha-amylase; glycosid 25.2 39 0.0013 30.9 2.8 25 109-133 106-130 (686)
50 3ttq_A Dextransucrase; (beta/a 25.2 38 0.0013 33.8 2.8 25 109-133 911-935 (1108)
51 3bmv_A Cyclomaltodextrin gluca 25.2 39 0.0013 30.9 2.8 25 109-133 115-139 (683)
52 1bf2_A Isoamylase; hydrolase, 24.9 30 0.001 32.4 2.0 24 110-133 272-295 (750)
53 3klk_A Glucansucrase; native f 24.9 39 0.0013 33.4 2.8 24 109-132 744-767 (1039)
54 3m07_A Putative alpha amylase; 24.7 41 0.0014 30.7 2.8 25 109-133 201-225 (618)
55 3qkx_A Uncharacterized HTH-typ 24.7 55 0.0019 22.9 3.0 20 95-117 40-59 (188)
56 3ijd_A Uncharacterized protein 24.5 19 0.00064 30.7 0.5 26 104-129 97-122 (315)
57 2e8y_A AMYX protein, pullulana 24.5 33 0.0011 31.7 2.2 25 109-133 314-338 (718)
58 3vgf_A Malto-oligosyltrehalose 24.5 34 0.0012 30.6 2.2 25 109-133 166-190 (558)
59 2wsk_A Glycogen debranching en 24.4 34 0.0012 31.4 2.2 25 109-133 240-264 (657)
60 3cdl_A Transcriptional regulat 24.4 1.4E+02 0.0047 21.5 5.3 21 95-118 41-61 (203)
61 4aee_A Alpha amylase, catalyti 24.2 42 0.0014 30.8 2.8 26 109-134 310-335 (696)
62 3k1d_A 1,4-alpha-glucan-branch 24.1 42 0.0014 31.6 2.8 24 109-132 311-334 (722)
63 3edf_A FSPCMD, cyclomaltodextr 23.7 44 0.0015 30.0 2.8 25 109-133 197-221 (601)
64 3fst_A 5,10-methylenetetrahydr 23.6 55 0.0019 27.4 3.2 32 103-136 89-120 (304)
65 3aml_A OS06G0726400 protein; s 23.6 43 0.0015 31.5 2.8 25 109-133 249-273 (755)
66 3mnl_A KSTR, transcriptional r 23.3 66 0.0023 22.8 3.3 19 95-116 52-70 (203)
67 3i1j_A Oxidoreductase, short c 22.9 1.8E+02 0.006 21.9 5.9 60 88-148 27-86 (247)
68 1g5a_A Amylosucrase; glycosylt 22.6 47 0.0016 30.2 2.8 26 109-134 161-186 (628)
69 3czg_A Sucrose hydrolase; (alp 22.5 48 0.0016 30.3 2.8 25 109-133 154-178 (644)
70 3apt_A Methylenetetrahydrofola 22.1 62 0.0021 27.0 3.2 30 100-129 75-104 (310)
71 4g81_D Putative hexonate dehyd 21.7 1.3E+02 0.0044 24.2 5.0 61 88-152 22-82 (255)
72 2vr5_A Glycogen operon protein 21.7 54 0.0018 30.4 3.0 23 110-132 266-288 (718)
73 1iv8_A Maltooligosyl trehalose 21.6 18 0.00062 34.3 -0.2 33 96-128 2-34 (720)
74 3dew_A Transcriptional regulat 21.4 95 0.0032 21.8 3.8 20 95-117 40-59 (206)
75 4ibo_A Gluconate dehydrogenase 21.1 2.7E+02 0.0091 21.7 6.8 59 88-150 39-97 (271)
76 2wan_A Pullulanase; hydrolase, 20.9 39 0.0013 32.4 2.0 24 110-133 531-554 (921)
77 4aio_A Limit dextrinase; hydro 20.1 43 0.0015 30.9 2.0 23 110-132 378-400 (884)
No 1
>1k87_A PUTA, proline dehydrogenase, proline dehydroge; multi-functional protein, transcripti repressor, shuttling, dimer, oxidoreductase; HET: FAD 1PE; 2.00A {Escherichia coli} SCOP: a.176.1.1 c.1.23.2
Probab=99.55 E-value=3.7e-15 Score=140.08 Aligned_cols=128 Identities=13% Similarity=0.164 Sum_probs=90.7
Q ss_pred CCChHHHhccCCHHHHHHHHHHHHhhCchHhhhhhHHHHHHHHHhhhhHHHHHHHHHHhhcccccCCChhhHHHHHHHHH
Q psy8070 42 FANPEAAFKSKTTWEVLRAYIVYQLCSSSFLVDNNMKLMKVGKAILGQKMFAQVMKLTFYGHFVAGEDQYKIVPVLKRLH 121 (173)
Q Consensus 42 F~d~~~af~~kst~eLlRs~lv~~l~s~p~LV~~~~~ll~~~~~~~g~~l~~~lvk~TfY~qFcaGEt~~Ev~~ti~~L~ 121 (173)
|++...+|..++||.|+++..++++|+.+.+++....+++.+..-+.++.++..|| +||+|||+|||++|+.+++++|+
T Consensus 198 ~~~s~s~~~~astw~L~~t~~v~~~~~~~~~~~~l~~ll~~~~~p~ir~~v~~~mr-~~~~qFVaGet~~ea~~~i~~L~ 276 (669)
T 1k87_A 198 IGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMR-LMGEQFVTGETIAEALANARKLE 276 (669)
T ss_dssp --CCCTTTTSTTHHHHHSCC------CHHHHHHHHHHHTTTTCHHHHHHHHHHHHH-HHHGGGCSBSSHHHHHHHHHHHH
T ss_pred hCCCchhhHhHHHHHHHHhhhhhhccccccHHHHHHHHHHhcccHHHHHHHHHHHH-HhhCeeeCCCCHHHHHHHHHHHH
Confidence 67778899999999999999999999999888888877765322222333444444 89999999999999999999999
Q ss_pred hCCCceeecccccccCChhHHHHHHHHhhhhHHhhh---h--hcccccceeeccc
Q psy8070 122 SFGVKPILDYSVEEDISQEEAEKRELEASTSELEQT---K--EAAAITEDVALKC 171 (173)
Q Consensus 122 ~~Gvg~ILdYavE~d~~~~e~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~ 171 (173)
+.|++.+|||..|+..++++ +++.++.+......- . .......||+||+
T Consensus 277 ~~G~~~slD~LGEa~~t~~e-A~~~~~~y~~~I~~i~~~~~~~~~~~~~~VSVKl 330 (669)
T 1k87_A 277 EKGFRYSYDMLGEAALTAAD-AQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKL 330 (669)
T ss_dssp TTTCEEEEEECCCCCCSHHH-HHHHHHHHHHHHHHHHHHHSSCHHHHSCEEEECG
T ss_pred hCCCeEEEEeeccccCCHHH-HHHHHHHHHHHHHHHHHhccCCCCCCCCeEEEec
Confidence 99999999999999877666 555555555433321 1 1112568999996
No 2
>2ekg_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; flavoenzyme, prodh, beta-alpha-barrel inhibitor, inactivation, flavocyanine; HET: LYX FAD; 1.90A {Thermus thermophilus} PDB: 2g37_A*
Probab=99.26 E-value=1.3e-11 Score=107.39 Aligned_cols=79 Identities=19% Similarity=0.161 Sum_probs=63.9
Q ss_pred HHHHHHHH---HhhcccccCCChhhHHHHHHHHHhCCCceeecccccccCChhHHHHHHHHhhhhHHhhhhhccccccee
Q psy8070 91 MFAQVMKL---TFYGHFVAGEDQYKIVPVLKRLHSFGVKPILDYSVEEDISQEEAEKRELEASTSELEQTKEAAAITEDV 167 (173)
Q Consensus 91 l~~~lvk~---TfY~qFcaGEt~~Ev~~ti~~L~~~Gvg~ILdYavE~d~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (173)
.+++++++ +||+|||||||++|+.+++++|++.|++.+|||..|+..++++ +++.++.++..+..-... +...+|
T Consensus 39 ~l~~~v~~~~~~~~~~FvaGet~~ea~~~~~~l~~~G~~~~ld~lgE~~~~~~~-a~~~~~~yl~~i~~i~~~-~~~~~v 116 (327)
T 2ekg_A 39 QVERLIKHRAKGLVRRYVAGETLEEALKAAEALEREGVHAILDLLGEMVRTEEE-ARAFQRGLLELVWALAGK-PWPKYI 116 (327)
T ss_dssp HHHHHHHHHCHHHHHHHCCCSSHHHHHHHHHHHHHTTCEEEEEEECSCCCSHHH-HHHHHHHHHHHHHHHTTC-SSCEEE
T ss_pred HHHHHHHHhhHhhhceeeCCCCHHHHHHHHHHHHhCCCEEEEeccccccCCHHH-HHHHHHHHHHHHHHHHhc-CCCCeE
Confidence 34556666 4999999999999999999999999999999999998766555 777788877766554322 357899
Q ss_pred eccc
Q psy8070 168 ALKC 171 (173)
Q Consensus 168 ~~~~ 171 (173)
+||.
T Consensus 117 SvKl 120 (327)
T 2ekg_A 117 SLXL 120 (327)
T ss_dssp EECG
T ss_pred EEEc
Confidence 9996
No 3
>4h6q_A Proline dehydrogenase; BETA8-alpha8-barrel, flavoenzyme, oxidoreductase; HET: FAD; 1.36A {Deinococcus radiodurans} PDB: 4h6r_A*
Probab=99.12 E-value=1.4e-10 Score=100.34 Aligned_cols=79 Identities=22% Similarity=0.178 Sum_probs=62.7
Q ss_pred HHHHHHHH---HhhcccccCCChhhHHHHHHHHHhCCCceeecccccccCChhHHHHHHHHhhhhHHhhhhhccccccee
Q psy8070 91 MFAQVMKL---TFYGHFVAGEDQYKIVPVLKRLHSFGVKPILDYSVEEDISQEEAEKRELEASTSELEQTKEAAAITEDV 167 (173)
Q Consensus 91 l~~~lvk~---TfY~qFcaGEt~~Ev~~ti~~L~~~Gvg~ILdYavE~d~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (173)
.++.++|+ +|++|||||||++|+.+++++|++.|++.+|||..|+..++++ .++.++.+...+..-.. .+.+++|
T Consensus 20 ~l~~~~~~~~~~~~~~FvaGet~~ea~~~~~~l~~~G~~~~ld~lGE~~~~~~e-A~~~~~~yl~~i~~i~~-~~~~~~v 97 (312)
T 4h6q_A 20 QVEQLARQKMWNLAERFVAGESIESAIQAVQALERDGIAGNLDLLGEFIDSPAK-CTEFADDVIKLIEAAHA-AGIKPYV 97 (312)
T ss_dssp GGGHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHTTCEEEEEECCCCCCCHHH-HHHHHHHHHHHHHHHHH-TTCCCEE
T ss_pred HHHHHHHhcchhhhCEeeCcCCHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHH-HHHHHHHHHHHHHHHHh-CCCCCeE
Confidence 36667776 9999999999999999999999999999999999998766555 56667777664444322 2346799
Q ss_pred eccc
Q psy8070 168 ALKC 171 (173)
Q Consensus 168 ~~~~ 171 (173)
.||.
T Consensus 98 SvKl 101 (312)
T 4h6q_A 98 SIKL 101 (312)
T ss_dssp EECG
T ss_pred EEeh
Confidence 9996
No 4
>3e2q_A Proline oxidase, proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, DNA-binding, FAD, flavoprotein, multifunctional enzyme, NAD; HET: FAD 1PE; 1.75A {Escherichia coli} PDB: 3e2r_A* 3e2s_A* 1tj2_A* 1tiw_A* 1tj0_A* 1tj1_A* 2fzm_A* 2fzn_A* 3itg_A*
Probab=98.70 E-value=1.8e-08 Score=93.05 Aligned_cols=83 Identities=14% Similarity=0.242 Sum_probs=59.0
Q ss_pred hhHHHHHHHH---HHhhcccccCCChhhHHHHHHHHHhCCCceeecccccccCChhHHHHHHHHhhhh---HHhhhhhcc
Q psy8070 88 GQKMFAQVMK---LTFYGHFVAGEDQYKIVPVLKRLHSFGVKPILDYSVEEDISQEEAEKRELEASTS---ELEQTKEAA 161 (173)
Q Consensus 88 g~~l~~~lvk---~TfY~qFcaGEt~~Ev~~ti~~L~~~Gvg~ILdYavE~d~~~~e~~~~~~~~~~~---~~~~~~~~~ 161 (173)
|..+++..|+ +++|+|||+|||++|+.+++++|++.|++.+|||.-|+..+++++ ++..+.+.. .........
T Consensus 155 g~p~ir~~v~~a~r~~~~qFVaGeTi~eAl~~~~~l~~~G~~~slD~LGEav~te~eA-~~~~~~y~~~I~ai~~~~~~~ 233 (551)
T 3e2q_A 155 GEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADA-QAYMVSYQQAIHAIGKASNGR 233 (551)
T ss_dssp CHHHHHHHHHHHHHHHHGGGCCBSSHHHHHHTCHHHHTTTCEEEEEECCCSCCSHHHH-HHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhhCeecCCCCHHHHHHHHHHHHhCCCEEEEeccccccCCHHHH-HHHHHHHHHHHHHHHHhcccC
Confidence 3344566555 689999999999999999999999999999999999987776664 444444444 222221111
Q ss_pred cc--cceeeccc
Q psy8070 162 AI--TEDVALKC 171 (173)
Q Consensus 162 ~~--~~~~~~~~ 171 (173)
.+ ..+|.||.
T Consensus 234 ~~~~~~~VSVKl 245 (551)
T 3e2q_A 234 GIYEGPGISIKL 245 (551)
T ss_dssp HHHHSCEEEECH
T ss_pred CCCCCCeEEEeh
Confidence 12 24888885
No 5
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=98.60 E-value=4e-08 Score=95.97 Aligned_cols=81 Identities=17% Similarity=0.143 Sum_probs=58.2
Q ss_pred HHHHHHHH---HHhhcccccCCChhhHHHHHHHHHhCCCceeecccccccCChhHHHHHHHHhhhhHHhh---hhh--cc
Q psy8070 90 KMFAQVMK---LTFYGHFVAGEDQYKIVPVLKRLHSFGVKPILDYSVEEDISQEEAEKRELEASTSELEQ---TKE--AA 161 (173)
Q Consensus 90 ~l~~~lvk---~TfY~qFcaGEt~~Ev~~ti~~L~~~Gvg~ILdYavE~d~~~~e~~~~~~~~~~~~~~~---~~~--~~ 161 (173)
.+++.+++ +.||+|||+|||++|+.+++++|++.|+...+||..|...++++ .++.++.+...... ... ..
T Consensus 152 p~ir~~~~~~~r~~~~qFvaGet~~eal~~~~~l~~~G~~~sld~lgE~~~~~~e-A~~~~~~y~~~i~~i~~~~~~~~~ 230 (1001)
T 3haz_A 152 PAVRTATRQAMRLMGNHFVLGETIEQALERGKPRSGQKTRYSFDMLGEGARTAAD-ARRYFDAYASAIETIGKAAGNHAL 230 (1001)
T ss_dssp HHHHHHHHHHHHHHHHHCEEESSHHHHHHHHCCSSSCCCSSEEEECCCCCCSHHH-HHHHHHHHHHHHHHHHHTCCSCCT
T ss_pred HHHHHHHHHHHHHhhCeeecCCCHHHHHHHHHHHHhCCCEEEEeccccccCCHHH-HHHHHHHHHHHHHHHHHhhccCCC
Confidence 33444444 35899999999999999999999999999999999998776666 55555555554333 211 11
Q ss_pred cccceeeccc
Q psy8070 162 AITEDVALKC 171 (173)
Q Consensus 162 ~~~~~~~~~~ 171 (173)
....||.||.
T Consensus 231 ~~~~~vSvKl 240 (1001)
T 3haz_A 231 PDRPGISVKL 240 (1001)
T ss_dssp TSSCEEEECH
T ss_pred CCCCeEEEec
Confidence 2246999985
No 6
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=98.40 E-value=5.3e-07 Score=88.35 Aligned_cols=62 Identities=21% Similarity=0.305 Sum_probs=49.0
Q ss_pred HHHHHHHHH---HhhcccccCCChhhHHHHHHHHHhCCCceeecccccccCChhHHHHHHHHhhhh
Q psy8070 90 KMFAQVMKL---TFYGHFVAGEDQYKIVPVLKRLHSFGVKPILDYSVEEDISQEEAEKRELEASTS 152 (173)
Q Consensus 90 ~l~~~lvk~---TfY~qFcaGEt~~Ev~~ti~~L~~~Gvg~ILdYavE~d~~~~e~~~~~~~~~~~ 152 (173)
+++...+|. ++++|||+|||++|+.+++++|++.|++.+|||..|+..++++ .++.++.+..
T Consensus 124 ~~~~~~~~~a~r~~~~qFvaGet~~ea~~~~~~l~~~G~~~~lD~lGE~~~~~~e-A~~~~~~y~~ 188 (1026)
T 4f9i_A 124 AVLNKVLTSNIEEMARQFIVGETTKEAVKNLEKLRKDGFAAVVDVLGEATLSEEE-AEVYTNTYLE 188 (1026)
T ss_dssp CHHHHHHHHHHHHHHHTTCSCSSHHHHHHHHHHHHHTTCEEEEEESCCSCCSHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcceeCCCCHHHHHHHHHHHHhCCCEEEEeccccccCCHHH-HHHHHHHHHH
Confidence 334444444 5699999999999999999999999999999999998777666 4455555444
No 7
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=52.25 E-value=8.3 Score=32.65 Aligned_cols=24 Identities=17% Similarity=0.307 Sum_probs=22.1
Q ss_pred ChhhHHHHHHHHHhCCCceeeccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYS 132 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYa 132 (173)
|.+|.+..|+++++.||++|||.-
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc
Confidence 789999999999999999999853
No 8
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=40.62 E-value=16 Score=31.68 Aligned_cols=25 Identities=12% Similarity=0.250 Sum_probs=23.1
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..|+++.+.||++|||.-.
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 6899999999999999999999855
No 9
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=39.27 E-value=17 Score=31.49 Aligned_cols=25 Identities=12% Similarity=0.101 Sum_probs=22.8
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..|+++++.||++|||.-.
T Consensus 79 t~~df~~lv~~aH~~Gi~VilD~V~ 103 (480)
T 1ud2_A 79 TKAQLERAIGSLKSNDINVYGDVVM 103 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 5899999999999999999999744
No 10
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=39.10 E-value=17 Score=31.51 Aligned_cols=25 Identities=12% Similarity=0.207 Sum_probs=22.6
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..|+++++.||++|||.-.
T Consensus 81 t~~df~~Lv~~aH~~Gi~VilD~V~ 105 (485)
T 1wpc_A 81 TRSQLQAAVTSLKNNGIQVYGDVVM 105 (485)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEec
Confidence 5899999999999999999999743
No 11
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=39.05 E-value=17 Score=31.48 Aligned_cols=25 Identities=20% Similarity=0.199 Sum_probs=22.7
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..|+++++.||++|||.-.
T Consensus 77 t~~df~~lv~~aH~~Gi~VilD~V~ 101 (483)
T 3bh4_A 77 TKSELQDAIGSLHSRNVQVYGDVVL 101 (483)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 5899999999999999999999743
No 12
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=38.77 E-value=18 Score=31.21 Aligned_cols=25 Identities=16% Similarity=0.337 Sum_probs=22.5
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..++++++.||++|||.-.
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~ 87 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLI 87 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEee
Confidence 5899999999999999999999643
No 13
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=38.61 E-value=18 Score=31.30 Aligned_cols=25 Identities=16% Similarity=0.214 Sum_probs=22.7
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..++++++.||++|||.-.
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~ 120 (478)
T 2guy_A 96 TADDLKALSSALHERGMYLMVDVVA 120 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 6899999999999999999999644
No 14
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=38.00 E-value=19 Score=30.67 Aligned_cols=24 Identities=25% Similarity=0.419 Sum_probs=21.9
Q ss_pred ChhhHHHHHHHHHhCCCceeeccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYS 132 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYa 132 (173)
|.+|.+..++++++.||++|||.-
T Consensus 67 t~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 67 NAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 689999999999999999999853
No 15
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=37.85 E-value=19 Score=30.86 Aligned_cols=26 Identities=19% Similarity=0.487 Sum_probs=23.7
Q ss_pred ChhhHHHHHHHHHhCCCceeeccccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSVE 134 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYavE 134 (173)
|.+|.+..++++++.||++|||.-.=
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~N 93 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIH 93 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 68999999999999999999998663
No 16
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=37.21 E-value=19 Score=30.99 Aligned_cols=25 Identities=24% Similarity=0.565 Sum_probs=22.8
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..++++++.||++|||.-.
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 6899999999999999999999644
No 17
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=37.17 E-value=19 Score=31.71 Aligned_cols=25 Identities=12% Similarity=0.239 Sum_probs=22.7
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..|+++++.||++|||.-.
T Consensus 80 t~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 80 TKAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEec
Confidence 6899999999999999999999743
No 18
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=37.05 E-value=17 Score=31.09 Aligned_cols=25 Identities=16% Similarity=0.336 Sum_probs=23.0
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
+.+|.+..++++++.||++|||.-.
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~ 97 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVI 97 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecc
Confidence 7899999999999999999999654
No 19
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=36.30 E-value=20 Score=30.83 Aligned_cols=26 Identities=27% Similarity=0.358 Sum_probs=23.7
Q ss_pred ChhhHHHHHHHHHhCCCceeeccccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSVE 134 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYavE 134 (173)
|.+|.+..++++++.||++|||.-.=
T Consensus 95 t~~df~~lv~~~h~~Gi~VilD~V~N 120 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGVRVILDGVFN 120 (475)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 68999999999999999999998664
No 20
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=36.26 E-value=20 Score=31.72 Aligned_cols=25 Identities=20% Similarity=0.207 Sum_probs=22.6
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..++++++.||++|||.-.
T Consensus 91 t~~dfk~Lv~~aH~~GI~VilD~V~ 115 (527)
T 1gcy_A 91 SDAQLRQAASALGGAGVKVLYDVVP 115 (527)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEee
Confidence 6899999999999999999999543
No 21
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=35.41 E-value=21 Score=30.97 Aligned_cols=25 Identities=16% Similarity=0.211 Sum_probs=22.6
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..++++++.||++|||.-.
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~ 120 (484)
T 2aaa_A 96 TADNLKSLSDALHARGMYLMVDVVP 120 (484)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5799999999999999999999654
No 22
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=34.66 E-value=21 Score=31.99 Aligned_cols=25 Identities=28% Similarity=0.321 Sum_probs=22.7
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..|+++++.||++|||.-.
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V~ 242 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAVF 242 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 5799999999999999999999654
No 23
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=34.62 E-value=15 Score=23.94 Aligned_cols=31 Identities=13% Similarity=0.154 Sum_probs=26.4
Q ss_pred HHhhcccccC-CChhhHHHHHHHHHhCCCcee
Q psy8070 98 LTFYGHFVAG-EDQYKIVPVLKRLHSFGVKPI 128 (173)
Q Consensus 98 ~TfY~qFcaG-Et~~Ev~~ti~~L~~~Gvg~I 128 (173)
.++|+-.+|+ .+.+|.....++|+..|+.++
T Consensus 43 ~~~yRV~vGpf~~~~~A~~~~~~L~~~g~~~~ 74 (79)
T 1x60_A 43 DGLYKVQIGAFSSKDNADTLAARAKNAGFDAI 74 (79)
T ss_dssp TTEEEEEEEEESSHHHHHHHHHHHHHHTSCCE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHHHcCCceE
Confidence 4789999998 478999999999999998653
No 24
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=33.80 E-value=24 Score=30.67 Aligned_cols=26 Identities=19% Similarity=0.355 Sum_probs=23.7
Q ss_pred ChhhHHHHHHHHHhCCCceeeccccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSVE 134 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYavE 134 (173)
|.+|.+..++++++.||++|||.-.=
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V~N 105 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLPIN 105 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 68999999999999999999998663
No 25
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=33.39 E-value=24 Score=31.73 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=22.9
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..|+++++.||++|||.-.
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V~ 245 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAVF 245 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5799999999999999999999755
No 26
>3f1b_A TETR-like transcriptional regulator; APC5888, rhodococcus SP. RHA1, structural genomics, PS protein structure initiative; 2.40A {Rhodococcus}
Probab=32.52 E-value=36 Score=24.26 Aligned_cols=20 Identities=10% Similarity=0.197 Sum_probs=13.0
Q ss_pred HHHHHhhcccccCCChhhHHHHH
Q psy8070 95 VMKLTFYGHFVAGEDQYKIVPVL 117 (173)
Q Consensus 95 lvk~TfY~qFcaGEt~~Ev~~ti 117 (173)
+=+.|||.|| .+.+++...+
T Consensus 46 vs~~t~Y~~F---~sK~~L~~~~ 65 (203)
T 3f1b_A 46 ISKPMLYLYY---GSKDELFAAC 65 (203)
T ss_dssp SCHHHHHHHC---CSHHHHHHHH
T ss_pred CchHHHHHHh---CCHHHHHHHH
Confidence 4566999999 5555554443
No 27
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=32.23 E-value=23 Score=31.83 Aligned_cols=26 Identities=19% Similarity=0.351 Sum_probs=23.5
Q ss_pred ChhhHHHHHHHHHhCCCceeeccccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSVE 134 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYavE 134 (173)
|.+|.+..|+++++.||++|||.-.=
T Consensus 217 t~~df~~lv~~~H~~Gi~VilD~V~N 242 (583)
T 1ea9_C 217 DKDTLKKLVDLCHERGIRVLLDAVFN 242 (583)
T ss_dssp CHHHHHHHHHHHTTTTCEEEEECCCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccc
Confidence 57999999999999999999997653
No 28
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=30.67 E-value=28 Score=31.60 Aligned_cols=25 Identities=32% Similarity=0.436 Sum_probs=23.0
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..|+++++.||++|||.-.
T Consensus 284 t~~df~~LV~~aH~~GI~VIlD~V~ 308 (645)
T 4aef_A 284 GDRAFVDLLSELKRFDIKVILDGVF 308 (645)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHhhhcCCEEEEEecc
Confidence 6799999999999999999999755
No 29
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=30.12 E-value=30 Score=29.59 Aligned_cols=25 Identities=24% Similarity=0.361 Sum_probs=22.8
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..++++++.||++|||.-.
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 6799999999999999999999754
No 30
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=30.10 E-value=26 Score=30.41 Aligned_cols=25 Identities=20% Similarity=0.345 Sum_probs=22.5
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..++++++.||++|||.-.
T Consensus 73 t~~d~~~lv~~~h~~Gi~VilD~V~ 97 (471)
T 1jae_A 73 DESAFTDMTRRCNDAGVRIYVDAVI 97 (471)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEec
Confidence 5899999999999999999999644
No 31
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=29.92 E-value=24 Score=30.58 Aligned_cols=26 Identities=19% Similarity=0.216 Sum_probs=23.3
Q ss_pred ChhhHHHHHHHHHhCCCceeeccccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSVE 134 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYavE 134 (173)
|.+|.+..|+++++.||++|||.-.=
T Consensus 101 t~~df~~Lv~~aH~~Gi~VilD~V~N 126 (488)
T 2wc7_A 101 GNEAFKELLDAAHQRNIKVVLDGVFN 126 (488)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 47999999999999999999998664
No 32
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=29.85 E-value=1.4e+02 Score=24.91 Aligned_cols=25 Identities=16% Similarity=0.199 Sum_probs=22.7
Q ss_pred cCCChhhHHHHHHHHHhCCCceeec
Q psy8070 106 AGEDQYKIVPVLKRLHSFGVKPILD 130 (173)
Q Consensus 106 aGEt~~Ev~~ti~~L~~~Gvg~ILd 130 (173)
+..+.+++.+.+++.++.|+++|||
T Consensus 55 g~~~~~~~~~~~~~A~~~GlkV~ld 79 (332)
T 1hjs_A 55 GNYNLDYNIAIAKRAKAAGLGVYID 79 (332)
T ss_dssp CTTSHHHHHHHHHHHHHTTCEEEEE
T ss_pred CcCCHHHHHHHHHHHHHCCCEEEEE
Confidence 4568899999999999999999998
No 33
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=29.34 E-value=30 Score=30.87 Aligned_cols=26 Identities=4% Similarity=0.175 Sum_probs=23.7
Q ss_pred ChhhHHHHHHHHHhCCCceeeccccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSVE 134 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYavE 134 (173)
|.+|.+..|+++++.||++|||.-.=
T Consensus 91 t~~df~~lv~~aH~~Gi~VilD~V~N 116 (570)
T 1m53_A 91 TMEDFDSLVAEMKKRNMRLMIDVVIN 116 (570)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 68999999999999999999998663
No 34
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=28.69 E-value=32 Score=30.59 Aligned_cols=26 Identities=12% Similarity=0.253 Sum_probs=23.6
Q ss_pred ChhhHHHHHHHHHhCCCceeeccccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSVE 134 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYavE 134 (173)
|.+|.+..++++++.||++|||.-.=
T Consensus 78 t~~df~~Lv~~aH~~Gi~VilD~V~N 103 (557)
T 1zja_A 78 TMEDFDRLMAELKKRGMRLMVDVVIN 103 (557)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 58999999999999999999998663
No 35
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=28.68 E-value=32 Score=30.60 Aligned_cols=26 Identities=19% Similarity=0.263 Sum_probs=23.6
Q ss_pred ChhhHHHHHHHHHhCCCceeeccccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSVE 134 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYavE 134 (173)
|.+|.+..++++++.||++|||.-.=
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~N 102 (558)
T 1uok_A 77 TMEDWDELLHEMHERNMKLMMDLVVN 102 (558)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 68999999999999999999998663
No 36
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=28.11 E-value=32 Score=31.14 Aligned_cols=25 Identities=20% Similarity=0.307 Sum_probs=22.5
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..|+++.+.||++|||.-.
T Consensus 203 t~~~~~~lv~~~H~~Gi~VilD~V~ 227 (617)
T 1m7x_A 203 TRDDFRYFIDAAHAAGLNVILDWVP 227 (617)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEec
Confidence 5899999999999999999999643
No 37
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=27.81 E-value=32 Score=33.09 Aligned_cols=24 Identities=33% Similarity=0.524 Sum_probs=22.3
Q ss_pred ChhhHHHHHHHHHhCCCceeeccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYS 132 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYa 132 (173)
|.+|.+..|++|++.||++|||.-
T Consensus 691 t~~df~~lv~~~H~~GI~VilD~V 714 (844)
T 3aie_A 691 TADDLVKAIKALHSKGIKVMADWV 714 (844)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc
Confidence 789999999999999999999864
No 38
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=27.65 E-value=35 Score=29.35 Aligned_cols=25 Identities=16% Similarity=0.247 Sum_probs=23.0
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..++++++.|+++|||.-.
T Consensus 80 t~~d~~~lv~~ah~~Gi~vilD~V~ 104 (424)
T 2dh2_A 80 SKEDFDSLLQSAKKKSIRVILDLTP 104 (424)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECC
Confidence 5899999999999999999999855
No 39
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=27.13 E-value=35 Score=30.28 Aligned_cols=26 Identities=27% Similarity=0.362 Sum_probs=23.6
Q ss_pred ChhhHHHHHHHHHhCCCceeeccccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSVE 134 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYavE 134 (173)
|.+|.+..++++++.||++|||.-.=
T Consensus 77 t~~d~~~lv~~~h~~Gi~vilD~V~N 102 (555)
T 2ze0_A 77 TMDDFDELLAQAHRRGLKVILDLVIN 102 (555)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 58999999999999999999998664
No 40
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=27.06 E-value=35 Score=30.30 Aligned_cols=26 Identities=23% Similarity=0.328 Sum_probs=23.7
Q ss_pred ChhhHHHHHHHHHhCCCceeeccccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSVE 134 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYavE 134 (173)
|.+|.+..++++++.||++|||.-.=
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~N 102 (543)
T 2zic_A 77 NMADMDNLLTQAKMRGIKIIMDLVVN 102 (543)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 68999999999999999999998764
No 41
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=26.62 E-value=36 Score=31.22 Aligned_cols=25 Identities=16% Similarity=0.295 Sum_probs=22.7
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..++++++.||++|||.-.
T Consensus 114 t~~dfk~Lv~~aH~~GI~VilD~V~ 138 (686)
T 1d3c_A 114 TIADFQNLIAAAHAKNIKVIIDFAP 138 (686)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCc
Confidence 5899999999999999999999644
No 42
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=26.60 E-value=36 Score=30.88 Aligned_cols=24 Identities=17% Similarity=0.351 Sum_probs=22.3
Q ss_pred ChhhHHHHHHHHHhCCCceeeccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYS 132 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYa 132 (173)
|.+|.+..|+++++.||++|||.-
T Consensus 191 t~~d~~~lv~~~H~~Gi~VilD~V 214 (602)
T 2bhu_A 191 RPEDLMALVDAAHRLGLGVFLDVV 214 (602)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEec
Confidence 589999999999999999999974
No 43
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=26.39 E-value=34 Score=31.08 Aligned_cols=23 Identities=22% Similarity=0.476 Sum_probs=21.5
Q ss_pred hhhHHHHHHHHHhCCCceeeccc
Q psy8070 110 QYKIVPVLKRLHSFGVKPILDYS 132 (173)
Q Consensus 110 ~~Ev~~ti~~L~~~Gvg~ILdYa 132 (173)
.+|.+..|+++.+.||++|||.-
T Consensus 181 ~~~~~~lv~~~H~~Gi~VilD~V 203 (637)
T 1gjw_A 181 DEEFKAFVEACHILGIRVILDFI 203 (637)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEC
Confidence 69999999999999999999964
No 44
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=26.09 E-value=37 Score=30.81 Aligned_cols=25 Identities=16% Similarity=0.248 Sum_probs=22.6
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..++++++.||++|||.-.
T Consensus 207 t~~dfk~Lv~~aH~~GI~VilD~V~ 231 (599)
T 3bc9_A 207 TKGELENAIDALHNNDIKVYFDAVL 231 (599)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 6799999999999999999999743
No 45
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=26.09 E-value=32 Score=22.62 Aligned_cols=30 Identities=13% Similarity=0.068 Sum_probs=26.1
Q ss_pred HHhhcccccCC-ChhhHHHHHHHHHhCCCce
Q psy8070 98 LTFYGHFVAGE-DQYKIVPVLKRLHSFGVKP 127 (173)
Q Consensus 98 ~TfY~qFcaGE-t~~Ev~~ti~~L~~~Gvg~ 127 (173)
.++|+-.+|.- +.+|.....++|++.|+..
T Consensus 43 ~~~yRV~vGpf~s~~~A~~~~~~L~~~g~~~ 73 (81)
T 1uta_A 43 NGWNRVVIGPVKGKENADSTLNRLKMAGHTN 73 (81)
T ss_dssp SSSEEEEESSCBTTTHHHHHHHHHHHHCCSC
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHHHcCCCc
Confidence 57899999885 8899999999999999854
No 46
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=26.09 E-value=37 Score=30.55 Aligned_cols=26 Identities=19% Similarity=0.400 Sum_probs=23.6
Q ss_pred ChhhHHHHHHHHHhCCCceeeccccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSVE 134 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYavE 134 (173)
|.+|.+..|+++++.||++|||.-.=
T Consensus 86 t~~df~~lv~~~h~~Gi~VilD~V~N 111 (589)
T 3aj7_A 86 TNEDCFALIEKTHKLGMKFITDLVIN 111 (589)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 67999999999999999999998663
No 47
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=26.03 E-value=28 Score=32.25 Aligned_cols=23 Identities=22% Similarity=0.364 Sum_probs=21.3
Q ss_pred hhhHHHHHHHHHhCCCceeeccc
Q psy8070 110 QYKIVPVLKRLHSFGVKPILDYS 132 (173)
Q Consensus 110 ~~Ev~~ti~~L~~~Gvg~ILdYa 132 (173)
.+|.+..|+++.+.||++|||.-
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV 276 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVV 276 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 69999999999999999999954
No 48
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=25.47 E-value=38 Score=30.95 Aligned_cols=25 Identities=20% Similarity=0.384 Sum_probs=22.8
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..++++++.||++|||.-.
T Consensus 110 t~~df~~Lv~~aH~~GIkVilD~V~ 134 (680)
T 1cyg_A 110 TLSDFQRLVDAAHAKGIKVIIDFAP 134 (680)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5899999999999999999999754
No 49
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=25.24 E-value=39 Score=30.94 Aligned_cols=25 Identities=20% Similarity=0.345 Sum_probs=22.8
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..++++++.||++|||.-.
T Consensus 106 t~~df~~Lv~~aH~~GikVilD~V~ 130 (686)
T 1qho_A 106 NWTTFDTLVNDAHQNGIKVIVDFVP 130 (686)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecc
Confidence 5899999999999999999999754
No 50
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A*
Probab=25.20 E-value=38 Score=33.78 Aligned_cols=25 Identities=12% Similarity=0.167 Sum_probs=22.8
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
+.+|.+..|++|++.||++|||--.
T Consensus 911 t~edfk~LV~alH~~GI~VIlDvV~ 935 (1108)
T 3ttq_A 911 TDGDLRATIQALHHANMQVMADVVD 935 (1108)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecc
Confidence 7899999999999999999999653
No 51
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=25.19 E-value=39 Score=30.91 Aligned_cols=25 Identities=16% Similarity=0.360 Sum_probs=22.7
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..++++++.||++|||.-.
T Consensus 115 t~~dfk~Lv~~aH~~GikVilD~V~ 139 (683)
T 3bmv_A 115 SFTDFQNLINTAHAHNIKVIIDFAP 139 (683)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 5899999999999999999999644
No 52
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=24.91 E-value=30 Score=32.37 Aligned_cols=24 Identities=17% Similarity=0.340 Sum_probs=22.0
Q ss_pred hhhHHHHHHHHHhCCCceeecccc
Q psy8070 110 QYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 110 ~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
.+|.+..|+++.+.||++|||...
T Consensus 272 ~~efk~lV~~~H~~Gi~VilDvV~ 295 (750)
T 1bf2_A 272 TAEFQAMVQAFHNAGIKVYMDVVY 295 (750)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEec
Confidence 899999999999999999999643
No 53
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A
Probab=24.86 E-value=39 Score=33.42 Aligned_cols=24 Identities=25% Similarity=0.455 Sum_probs=22.3
Q ss_pred ChhhHHHHHHHHHhCCCceeeccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYS 132 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYa 132 (173)
+.+|.+..|++|++.||++|||--
T Consensus 744 t~~efk~lV~alH~~GI~VIlDvV 767 (1039)
T 3klk_A 744 SDEDLRNALQALHKAGLQAIADWV 767 (1039)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc
Confidence 689999999999999999999964
No 54
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=24.70 E-value=41 Score=30.75 Aligned_cols=25 Identities=16% Similarity=0.385 Sum_probs=22.5
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
+.+|.+..|+++++.||++|||...
T Consensus 201 ~~~~~~~lv~~~H~~Gi~VilD~V~ 225 (618)
T 3m07_A 201 TPDDFKAFIDAAHGYGLSVVLDIVL 225 (618)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEeecC
Confidence 5799999999999999999999643
No 55
>3qkx_A Uncharacterized HTH-type transcriptional regulato; structural genomics, joint center for structural genomics; HET: MSE; 2.35A {Haemophilus influenzae}
Probab=24.66 E-value=55 Score=22.89 Aligned_cols=20 Identities=20% Similarity=0.245 Sum_probs=13.1
Q ss_pred HHHHHhhcccccCCChhhHHHHH
Q psy8070 95 VMKLTFYGHFVAGEDQYKIVPVL 117 (173)
Q Consensus 95 lvk~TfY~qFcaGEt~~Ev~~ti 117 (173)
+=|.|||.||= +.+++...+
T Consensus 40 vs~~t~Y~~F~---sK~~L~~~~ 59 (188)
T 3qkx_A 40 VAAGTIYLYFK---NKDELLEQF 59 (188)
T ss_dssp CCHHHHHHHSS---SHHHHHHHH
T ss_pred CCcchHHHHcC---CHHHHHHHH
Confidence 44669999993 566655443
No 56
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=24.54 E-value=19 Score=30.72 Aligned_cols=26 Identities=4% Similarity=-0.001 Sum_probs=23.9
Q ss_pred cccCCChhhHHHHHHHHHhCCCceee
Q psy8070 104 FVAGEDQYKIVPVLKRLHSFGVKPIL 129 (173)
Q Consensus 104 FcaGEt~~Ev~~ti~~L~~~Gvg~IL 129 (173)
-|+|-|.+|+...++.++..||..||
T Consensus 97 tc~~~t~~ei~~~L~~~~~~GI~niL 122 (315)
T 3ijd_A 97 CVGKYTPDEFRRLTRPVSGQDAFSVF 122 (315)
T ss_dssp EGGGSCHHHHHHHHSCCTTCCCEEEE
T ss_pred eeCCCCHHHHHHHHHHHHHcCCcEEe
Confidence 37889999999999999999998887
No 57
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=24.52 E-value=33 Score=31.71 Aligned_cols=25 Identities=24% Similarity=0.487 Sum_probs=22.5
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
+.+|.+..|+++++.||++|||.-.
T Consensus 314 ~~~dfk~LV~~aH~~GI~VIlDvV~ 338 (718)
T 2e8y_A 314 RKTELKQMINTLHQHGLRVILDVVF 338 (718)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4699999999999999999999654
No 58
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=24.45 E-value=34 Score=30.57 Aligned_cols=25 Identities=20% Similarity=0.210 Sum_probs=22.4
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..|+++++.||++|||...
T Consensus 166 t~~d~~~lv~~~h~~Gi~VilD~V~ 190 (558)
T 3vgf_A 166 GPEGFRKLVDEAHKKGLGVILDVVY 190 (558)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEEee
Confidence 5799999999999999999999643
No 59
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=24.45 E-value=34 Score=31.37 Aligned_cols=25 Identities=28% Similarity=0.401 Sum_probs=22.6
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
+.+|.+..|+++.+.||++|||.-.
T Consensus 240 ~~~d~~~lv~~~H~~Gi~VilD~V~ 264 (657)
T 2wsk_A 240 ALDEFRDAIKALHKAGIEVILDIVL 264 (657)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEee
Confidence 6899999999999999999999543
No 60
>3cdl_A Transcriptional regulator AEFR; APC88582, TETR, pseudomonas syringae PV. tomato STR. DC3000, structural genomics, PSI-2; HET: MSE; 2.36A {Pseudomonas syringae PV}
Probab=24.40 E-value=1.4e+02 Score=21.50 Aligned_cols=21 Identities=29% Similarity=0.458 Sum_probs=14.4
Q ss_pred HHHHHhhcccccCCChhhHHHHHH
Q psy8070 95 VMKLTFYGHFVAGEDQYKIVPVLK 118 (173)
Q Consensus 95 lvk~TfY~qFcaGEt~~Ev~~ti~ 118 (173)
+=|.|+|.|| .+.+++...+-
T Consensus 41 vsk~tlY~~F---~sKe~L~~a~~ 61 (203)
T 3cdl_A 41 VSKRTVYNHF---PSKEELFAEML 61 (203)
T ss_dssp SCHHHHHTTS---SSHHHHHHHHH
T ss_pred CCHHHHHHHC---CCHHHHHHHHH
Confidence 4466999999 46776665543
No 61
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=24.22 E-value=42 Score=30.84 Aligned_cols=26 Identities=23% Similarity=0.317 Sum_probs=23.4
Q ss_pred ChhhHHHHHHHHHhCCCceeeccccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSVE 134 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYavE 134 (173)
|.+|.+..++++++.||++|||.-.=
T Consensus 310 t~~df~~Lv~~aH~~GikVilD~V~N 335 (696)
T 4aee_A 310 TMEDFEKLVQVLHSRKIKIVLDITMH 335 (696)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CHHHHHHHHHHHHHCCCEEEEecccc
Confidence 58999999999999999999997653
No 62
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=24.09 E-value=42 Score=31.56 Aligned_cols=24 Identities=21% Similarity=0.398 Sum_probs=22.2
Q ss_pred ChhhHHHHHHHHHhCCCceeeccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYS 132 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYa 132 (173)
|.+|.+..|+++.+.||++|||..
T Consensus 311 t~~dfk~lV~~~H~~GI~VilD~V 334 (722)
T 3k1d_A 311 TPDDFRALVDALHQAGIGVIVDWV 334 (722)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEEE
Confidence 589999999999999999999964
No 63
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=23.66 E-value=44 Score=30.05 Aligned_cols=25 Identities=16% Similarity=0.143 Sum_probs=22.7
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..++++++.||++|||...
T Consensus 197 t~~df~~Lv~~aH~~Gi~VilD~V~ 221 (601)
T 3edf_A 197 SNEDFVRLSTEARKRGMGLIQDVVL 221 (601)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEECC
Confidence 6789999999999999999998754
No 64
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=23.63 E-value=55 Score=27.42 Aligned_cols=32 Identities=9% Similarity=0.209 Sum_probs=27.1
Q ss_pred ccccCCChhhHHHHHHHHHhCCCceeeccccccc
Q psy8070 103 HFVAGEDQYKIVPVLKRLHSFGVKPILDYSVEED 136 (173)
Q Consensus 103 qFcaGEt~~Ev~~ti~~L~~~Gvg~ILdYavE~d 136 (173)
--|.|-|.++++..+..++..||..|| ++=+|
T Consensus 89 ltc~~~~~~~l~~~L~~~~~~GI~nIL--aLrGD 120 (304)
T 3fst_A 89 LTCIDATPDELRTIARDYWNNGIRHIV--ALRGD 120 (304)
T ss_dssp EESTTSCHHHHHHHHHHHHHTTCCEEE--EECCC
T ss_pred eecCCCCHHHHHHHHHHHHHCCCCEEE--EecCC
Confidence 348899999999999999999999998 44444
No 65
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=23.63 E-value=43 Score=31.52 Aligned_cols=25 Identities=16% Similarity=0.360 Sum_probs=22.7
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..|+++.+.||++|||.-.
T Consensus 249 t~~df~~lv~~~H~~Gi~VilD~V~ 273 (755)
T 3aml_A 249 TPEDLKYLVDKAHSLGLRVLMDVVH 273 (755)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEec
Confidence 6899999999999999999999643
No 66
>3mnl_A KSTR, transcriptional regulatory protein (probably TETR; TETR family of transcriptional regulator, all-helical; 1.80A {Mycobacterium tuberculosis}
Probab=23.33 E-value=66 Score=22.84 Aligned_cols=19 Identities=21% Similarity=0.273 Sum_probs=11.4
Q ss_pred HHHHHhhcccccCCChhhHHHH
Q psy8070 95 VMKLTFYGHFVAGEDQYKIVPV 116 (173)
Q Consensus 95 lvk~TfY~qFcaGEt~~Ev~~t 116 (173)
+=|.|||.|| .+.+++...
T Consensus 52 vs~~t~Y~~F---~~K~~L~~~ 70 (203)
T 3mnl_A 52 VAVGTLYRYF---PSKVHLLVS 70 (203)
T ss_dssp CCHHHHHHHC---SSHHHHHHH
T ss_pred CChhHHHHHc---CCHHHHHHH
Confidence 4456888888 345554443
No 67
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=22.86 E-value=1.8e+02 Score=21.90 Aligned_cols=60 Identities=10% Similarity=0.061 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHhhcccccCCChhhHHHHHHHHHhCCCceeecccccccCChhHHHHHHHH
Q psy8070 88 GQKMFAQVMKLTFYGHFVAGEDQYKIVPVLKRLHSFGVKPILDYSVEEDISQEEAEKRELE 148 (173)
Q Consensus 88 g~~l~~~lvk~TfY~qFcaGEt~~Ev~~ti~~L~~~Gvg~ILdYavE~d~~~~e~~~~~~~ 148 (173)
|..+.+.+.++- ++-++.+.+.+......++++..|-....-+..+.|..+.+..++..+
T Consensus 27 G~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~ 86 (247)
T 3i1j_A 27 GAAAARAYAAHG-ASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAA 86 (247)
T ss_dssp HHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHCC-CEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHH
Confidence 333444444433 234445555555555555555554322222233333344444444333
No 68
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=22.56 E-value=47 Score=30.24 Aligned_cols=26 Identities=19% Similarity=0.411 Sum_probs=23.5
Q ss_pred ChhhHHHHHHHHHhCCCceeeccccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSVE 134 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYavE 134 (173)
|.+|.+..++++++.||++|||.-.=
T Consensus 161 t~~d~~~Lv~~ah~~GI~VilD~V~N 186 (628)
T 1g5a_A 161 TIGDLREVIAALHEAGISAVVDFIFN 186 (628)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 68999999999999999999998663
No 69
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=22.51 E-value=48 Score=30.29 Aligned_cols=25 Identities=20% Similarity=0.388 Sum_probs=23.1
Q ss_pred ChhhHHHHHHHHHhCCCceeecccc
Q psy8070 109 DQYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 109 t~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
|.+|.+..++++++.||++|||.-.
T Consensus 154 t~~df~~Lv~~aH~~GI~VilD~V~ 178 (644)
T 3czg_A 154 SNDDLVALTSRLREAGISLCADFVL 178 (644)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEec
Confidence 6899999999999999999999765
No 70
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=22.11 E-value=62 Score=27.01 Aligned_cols=30 Identities=30% Similarity=0.439 Sum_probs=26.0
Q ss_pred hhcccccCCChhhHHHHHHHHHhCCCceee
Q psy8070 100 FYGHFVAGEDQYKIVPVLKRLHSFGVKPIL 129 (173)
Q Consensus 100 fY~qFcaGEt~~Ev~~ti~~L~~~Gvg~IL 129 (173)
+-.--|.|-|.++++..+..++..||..||
T Consensus 75 i~Hltc~~~~~~~l~~~L~~~~~~GI~niL 104 (310)
T 3apt_A 75 LAHLTVAGQSRKEVAEVLHRFVESGVENLL 104 (310)
T ss_dssp CEEEECTTSCHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEeecCCCCHHHHHHHHHHHHHCCCCEEE
Confidence 334458899999999999999999999888
No 71
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=21.73 E-value=1.3e+02 Score=24.16 Aligned_cols=61 Identities=11% Similarity=0.049 Sum_probs=41.1
Q ss_pred hhHHHHHHHHHHhhcccccCCChhhHHHHHHHHHhCCCceeecccccccCChhHHHHHHHHhhhh
Q psy8070 88 GQKMFAQVMKLTFYGHFVAGEDQYKIVPVLKRLHSFGVKPILDYSVEEDISQEEAEKRELEASTS 152 (173)
Q Consensus 88 g~~l~~~lvk~TfY~qFcaGEt~~Ev~~ti~~L~~~Gvg~ILdYavE~d~~~~e~~~~~~~~~~~ 152 (173)
|+.+.+.+.+.= ++-.+.+.+.++..++.+++++.|...+ ++..|+++++..++.++....
T Consensus 22 G~aia~~la~~G-a~Vvi~~~~~~~~~~~~~~l~~~g~~~~---~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 22 GFAYAEGLAAAG-ARVILNDIRATLLAESVDTLTRKGYDAH---GVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp HHHHHHHHHHTT-CEEEECCSCHHHHHHHHHHHHHTTCCEE---ECCCCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEE---EEEeeCCCHHHHHHHHHHHHH
Confidence 333444555543 2456678888888899999988886543 455688888877777666554
No 72
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=21.70 E-value=54 Score=30.44 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=21.3
Q ss_pred hhhHHHHHHHHHhCCCceeeccc
Q psy8070 110 QYKIVPVLKRLHSFGVKPILDYS 132 (173)
Q Consensus 110 ~~Ev~~ti~~L~~~Gvg~ILdYa 132 (173)
.+|.+..|+++.+.||++|||.-
T Consensus 266 ~~dfk~lv~~~H~~Gi~VilDvV 288 (718)
T 2vr5_A 266 VLSFKKMVNELHNAGIEVIIDVV 288 (718)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 79999999999999999999963
No 73
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1
Probab=21.62 E-value=18 Score=34.27 Aligned_cols=33 Identities=12% Similarity=0.138 Sum_probs=28.9
Q ss_pred HHHHhhcccccCCChhhHHHHHHHHHhCCCcee
Q psy8070 96 MKLTFYGHFVAGEDQYKIVPVLKRLHSFGVKPI 128 (173)
Q Consensus 96 vk~TfY~qFcaGEt~~Ev~~ti~~L~~~Gvg~I 128 (173)
+..|+--||+.|-+..++...+..|+++||..|
T Consensus 2 ~~~TYrlq~~~gGtf~gi~~~LdYLk~LGVtaI 34 (720)
T 1iv8_A 2 ISATYRLQLNKNFNFGDVIDNLWYFXDLGVSHL 34 (720)
T ss_dssp TTCEEEECCBTTBCHHHHHHTHHHHHHHTCCEE
T ss_pred ceEEEeccCCCCCCHHHHHHHHHHHHhCCCCEE
Confidence 456888999999999999999999999998554
No 74
>3dew_A Transcriptional regulator, TETR family; S genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.75A {Geobacter sulfurreducens}
Probab=21.38 E-value=95 Score=21.82 Aligned_cols=20 Identities=10% Similarity=0.051 Sum_probs=11.5
Q ss_pred HHHHHhhcccccCCChhhHHHHH
Q psy8070 95 VMKLTFYGHFVAGEDQYKIVPVL 117 (173)
Q Consensus 95 lvk~TfY~qFcaGEt~~Ev~~ti 117 (173)
+=|.|||.|| .+.+++...+
T Consensus 40 vs~~t~Y~~F---~sK~~L~~~~ 59 (206)
T 3dew_A 40 ASISMISYHF---GGKEGLYAAV 59 (206)
T ss_dssp CCHHHHHHHS---CHHHHHHHHH
T ss_pred CCHHHHHHHc---CCHHHHHHHH
Confidence 3455788888 3555554443
No 75
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=21.11 E-value=2.7e+02 Score=21.73 Aligned_cols=59 Identities=14% Similarity=0.221 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHHhhcccccCCChhhHHHHHHHHHhCCCceeecccccccCChhHHHHHHHHhh
Q psy8070 88 GQKMFAQVMKLTFYGHFVAGEDQYKIVPVLKRLHSFGVKPILDYSVEEDISQEEAEKRELEAS 150 (173)
Q Consensus 88 g~~l~~~lvk~TfY~qFcaGEt~~Ev~~ti~~L~~~Gvg~ILdYavE~d~~~~e~~~~~~~~~ 150 (173)
|..+.+.+.+.- ++-.+.+.+.+......+++++.|.... .++.|+.+.+..++.++..
T Consensus 39 G~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~---~~~~Dv~d~~~v~~~~~~~ 97 (271)
T 4ibo_A 39 GRAMAEGLAVAG-ARILINGTDPSRVAQTVQEFRNVGHDAE---AVAFDVTSESEIIEAFARL 97 (271)
T ss_dssp HHHHHHHHHHTT-CEEEECCSCHHHHHHHHHHHHHTTCCEE---ECCCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceE---EEEcCCCCHHHHHHHHHHH
Confidence 444555555554 3556667777777777777777664432 2445777777666655544
No 76
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=20.88 E-value=39 Score=32.45 Aligned_cols=24 Identities=13% Similarity=0.176 Sum_probs=21.9
Q ss_pred hhhHHHHHHHHHhCCCceeecccc
Q psy8070 110 QYKIVPVLKRLHSFGVKPILDYSV 133 (173)
Q Consensus 110 ~~Ev~~ti~~L~~~Gvg~ILdYav 133 (173)
.+|.+..|+++++.||++|||.-.
T Consensus 531 ~~dfk~LV~~aH~~GI~VILDvV~ 554 (921)
T 2wan_A 531 ITELKQLIQSLHQQRIGVNMDVVY 554 (921)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHcCCEEEEEEcc
Confidence 699999999999999999999644
No 77
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=20.15 E-value=43 Score=30.93 Aligned_cols=23 Identities=13% Similarity=0.346 Sum_probs=20.9
Q ss_pred hhhHHHHHHHHHhCCCceeeccc
Q psy8070 110 QYKIVPVLKRLHSFGVKPILDYS 132 (173)
Q Consensus 110 ~~Ev~~ti~~L~~~Gvg~ILdYa 132 (173)
+.|.+..|+++.+.||++|||.-
T Consensus 378 ~~efk~LV~~aH~~GIkVIlDvV 400 (884)
T 4aio_A 378 IIEYRQMVQALNRIGLRVVMDVV 400 (884)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCceeeeec
Confidence 67899999999999999999964
Done!