BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8072
(584 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VRP9|BRE1_DROME E3 ubiquitin-protein ligase Bre1 OS=Drosophila melanogaster GN=Bre1
PE=1 SV=2
Length = 1044
Score = 590 bits (1521), Expect = e-168, Method: Compositional matrix adjust.
Identities = 341/606 (56%), Positives = 407/606 (67%), Gaps = 98/606 (16%)
Query: 1 MSKRGVDCEDASS-------SGQPPVKKVQFEPIRIGPISTLEEMDIKVLKFQNKKLAQR 53
MSKR D SS +GQPP+KKV FEP IGP+STLEEMDIKVL+FQNKKLAQR
Sbjct: 1 MSKRSADDATGSSCLVAAAAAGQPPIKKVHFEPHLIGPVSTLEEMDIKVLEFQNKKLAQR 60
Query: 54 IEQKNQVEHELRSRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIRILLQRFDAETADESES 113
IEQ+ + E ELR RIEQLEKRQTQDDAVLNVVNRYWNQLNEDIR+LLQRFDAETADE E+
Sbjct: 61 IEQRMRTEAELRHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIRVLLQRFDAETADELEN 120
Query: 114 KSQAALRALDVCAPPAYGNTNVMCLAITDENEATTSFLMQLSTWDKEELDEKLANRVQVS 173
+ +ENE TTSFL QLSTWDKEELDEKLANRVQVS
Sbjct: 121 R---------------------------NENEVTTSFLAQLSTWDKEELDEKLANRVQVS 153
Query: 174 KRAVAKIIQAFDRLVQRNEKITMILKGE------------------LNNSNGDP------ 209
KRAVAKI+Q DRL+QRNEKIT +LKG+ ++GD
Sbjct: 154 KRAVAKIVQVIDRLMQRNEKITHVLKGDSLASAGSGSGAGAGGEEEQQQASGDAETTTSS 213
Query: 210 --IPSLDEAVREANIEIQTENRNLTEQNTKLHAKYHSISLKISELQDAVNGKETEAAELR 267
+ +L+E +++ +IEI +EN L NT LH K+H++SLK+ E QDA KETE AEL+
Sbjct: 214 AGVHALEETLKQTHIEIMSENHKLQNLNTSLHEKFHTMSLKMKEYQDAHTAKETENAELK 273
Query: 268 NQIDDLQYELSKVQSRNDKLENHLLEATEKVKLCQQMHTEDGKEKDVIKPEETMSN---- 323
NQID+LQY+L K+ RNDKLENHL EA EK+K Q++ + K + K T +
Sbjct: 274 NQIDELQYDLEKIHCRNDKLENHLAEAIEKLKAYHQIYGDPNKSTNSAKTPTTTGSGGAT 333
Query: 324 --VSQKKLDDLQKDLEEAKELANNRLQELDKLHLQHREALKDVEKLKMDWEVTFNNEISW 381
V+ + L++LQK+LEE +ELANNRLQELDKLH HRE LK+VEKLKMD
Sbjct: 334 TSVNSQLLEELQKELEEYRELANNRLQELDKLHATHRETLKEVEKLKMD----------- 382
Query: 382 LVWSVNPTSLTTQLPRQIRQLPESVIVETTEYKCLQSAYSVLYNENQLAKTQAQEFQSHL 441
IRQLPESVIVETTEYKCLQS +SVLYNE+ KT E ++ L
Sbjct: 383 -----------------IRQLPESVIVETTEYKCLQSQFSVLYNESMQIKTMLDETRNQL 425
Query: 442 SASKNNQQRQIEMMETEELMVQKKLRGEMMQLEDALSQIRKEYEMLRIEFETNLAANEQT 501
SKN RQIE+ME+EEL+ QKK+R EM+Q+ED L+ IRKEYE LRIEFE N+AANEQT
Sbjct: 426 QTSKNQHLRQIEVMESEELIAQKKVRSEMIQMEDVLALIRKEYETLRIEFEQNMAANEQT 485
Query: 502 GPINREMRHLITSLQNHNKQIKGEVNRYKRKYKETSAEIQKVR--ISERSPWPSGYRLHA 559
PINREMRHLITSLQNHN Q+KGEV RYKRKYK+TS + K+R +++ G +L A
Sbjct: 486 APINREMRHLITSLQNHNGQLKGEVQRYKRKYKDTSTDNLKLRQELADALATLEGNKLQA 545
Query: 560 --GGSG 563
G +G
Sbjct: 546 ATGAAG 551
>sp|O75150|BRE1B_HUMAN E3 ubiquitin-protein ligase BRE1B OS=Homo sapiens GN=RNF40 PE=1
SV=4
Length = 1001
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 231/559 (41%), Positives = 326/559 (58%), Gaps = 55/559 (9%)
Query: 1 MSKRGVDCEDASSSGQPPVKKVQ---------FEPIRIGPISTLEEMDIKVLKFQNKKLA 51
MS G PP KK+ EPIR+G IS+ EEMD+KVL+F+NKKLA
Sbjct: 1 MSGPGNKRAAGDGGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLA 60
Query: 52 QRIEQKNQVEHELRSRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIRILLQRFD--AETAD 109
+R+EQ+ E ELR RIE+LEKRQ DDA L +VNRYW QL+E + LL+ + E +
Sbjct: 61 ERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLRCHESQGELSS 120
Query: 110 ESESKSQAALRALDVCAPPAYGNTNV---MCLAITDE-NEATTSFLMQLSTWDKEELDEK 165
E+ D P G + + + + + +E +F++ L EE++ +
Sbjct: 121 APEAPGTQEGPTCDGTPLPEPGTSELRDPLLMQLRPPLSEPALAFVVALGASSSEEVELE 180
Query: 166 LANRVQVSKRAVAKIIQAFDRLVQRNEKITMILKGELNNSNGDPIPSLDEAVREANIEIQ 225
L R++ SK AV+++++A DRL +R E++ + S GD P L EA + E+
Sbjct: 181 LQGRMEFSKAAVSRVVEASDRLQRRVEELCQRV-----YSRGDSEP-LSEAAQAHTRELG 234
Query: 226 TENRNLTEQNTKLHAKYHSISLKISELQDAVNGKETEAAELRNQIDDLQYELSKVQSRND 285
ENR L + T+L K+H ISL+ SELQD V ET+ E+ ++DLQ+++ K++ R
Sbjct: 235 RENRRLQDLATQLQEKHHRISLEYSELQDKVTSAETKVLEMETTVEDLQWDIEKLRKREQ 294
Query: 286 KLENHLLEATEKVKLCQQMHTEDGKEKDVIKPEETMSNVSQKKLDDLQKDLEEAKELANN 345
KL HL EA E Q+++ + +S +K + L +LEE +ELAN+
Sbjct: 295 KLNKHLAEALE------QLNSGYYVSGSSSGFQGGQITLSMQKFEMLNAELEENQELANS 348
Query: 346 RLQELDKLHLQHREALKDVEKLKMDWEVTFNNEISWLVWSVNPTSLTTQLPRQIRQLPES 405
R+ EL+KL + + A++ E+LK+ +R LPE
Sbjct: 349 RMAELEKLQAELQGAVRTNERLKV----------------------------ALRSLPEE 380
Query: 406 VIVETTEYKCLQSAYSVLYNENQLAKTQAQEFQSHLSASKNNQQRQIEMMETEELMVQKK 465
V+ ET EY+ LQ+ +S+LYNE+ KTQ E + L A+KN+ R IE ME++EL +QKK
Sbjct: 381 VVRETGEYRMLQAQFSLLYNESLQVKTQLDEARGLLLATKNSHLRHIEHMESDELGLQKK 440
Query: 466 LRGEMMQLEDALSQIRKEYEMLRIEFETNLAANEQTGPINREMRHLITSLQNHNKQIKGE 525
LR E++QLED L+Q+RKEYEMLRIEFE NLAANEQ GPINREMRHLI+SLQNHN Q+KG+
Sbjct: 441 LRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLISSLQNHNHQLKGD 500
Query: 526 VNRYKRKYKETSAEIQKVR 544
RYKRK +E AEI K+R
Sbjct: 501 AQRYKRKLREVQAEIGKLR 519
>sp|Q4R7K7|BRE1B_MACFA E3 ubiquitin-protein ligase BRE1B OS=Macaca fascicularis GN=RNF40
PE=2 SV=1
Length = 1001
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 230/557 (41%), Positives = 324/557 (58%), Gaps = 57/557 (10%)
Query: 5 GVDCEDASSSGQ--PPVKKVQ---------FEPIRIGPISTLEEMDIKVLKFQNKKLAQR 53
G+ + A+ G PP KK+ EPIR+G IS+ EE+D+KVL+F+NKKLA+R
Sbjct: 3 GLGNKRAAGDGGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEEIDLKVLQFKNKKLAER 62
Query: 54 IEQKNQVEHELRSRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIRILLQRFDA--ETADES 111
+EQ+ E ELR RIE+LEKRQ DDA L +VNRYW QL+E + LL+ + E +
Sbjct: 63 LEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLRCHEGQGELSSAP 122
Query: 112 ESKSQAALRALDVCAPPAYGNTNV----MCLAITDENEATTSFLMQLSTWDKEELDEKLA 167
E+ D P G + + +E +F++ L EE++ +L
Sbjct: 123 EAPGTQEGPTCDGTPLPEPGTSELREPLPLQLRPPLSEPALAFVVALGASSSEEVELELQ 182
Query: 168 NRVQVSKRAVAKIIQAFDRLVQRNEKITMILKGELNNSNGDPIPSLDEAVREANIEIQTE 227
R++ SK AV+ +++A DRL +R E++ + S GD P L E R E+ E
Sbjct: 183 GRMEFSKAAVSHVVEASDRLQRRVEELCQRV-----YSRGDSEP-LSEVARARTRELGRE 236
Query: 228 NRNLTEQNTKLHAKYHSISLKISELQDAVNGKETEAAELRNQIDDLQYELSKVQSRNDKL 287
NR L + T+L K+H ISL+ SELQD V ET+ E+ ++DLQ+++ K++ R KL
Sbjct: 237 NRRLQDLATQLQEKHHRISLEYSELQDKVTSAETKVLEMETTVEDLQWDIEKLRKREQKL 296
Query: 288 ENHLLEATEKVKLCQQMHTEDGKEKDVIKPEETMSNVSQKKLDDLQKDLEEAKELANNRL 347
HL EA E Q+++ + +S +K + L +LEE +ELAN+R+
Sbjct: 297 NKHLAEALE------QLNSGYYVSGSSSGFQGGQITLSMQKFEMLNAELEENQELANSRM 350
Query: 348 QELDKLHLQHREALKDVEKLKMDWEVTFNNEISWLVWSVNPTSLTTQLPRQIRQLPESVI 407
EL+KL + + A++ E+LK+ +R LPE V+
Sbjct: 351 AELEKLQAELQGAVRTNERLKV----------------------------ALRSLPEEVV 382
Query: 408 VETTEYKCLQSAYSVLYNENQLAKTQAQEFQSHLSASKNNQQRQIEMMETEELMVQKKLR 467
ET EY+ LQ+ +S+LYNE+ KTQ E + L A+KN+ R IE ME++EL +QKKLR
Sbjct: 383 RETGEYRMLQAQFSLLYNESLQVKTQLDEARGLLLATKNSHLRHIEHMESDELGLQKKLR 442
Query: 468 GEMMQLEDALSQIRKEYEMLRIEFETNLAANEQTGPINREMRHLITSLQNHNKQIKGEVN 527
E++QLED L+Q+RKEYEMLRIEFE NLAANEQ GPINREMRHLI+SLQNHN Q+KG+
Sbjct: 443 TEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLISSLQNHNHQLKGDAQ 502
Query: 528 RYKRKYKETSAEIQKVR 544
RYKRK +E AEI K+R
Sbjct: 503 RYKRKLREVQAEIGKLR 519
>sp|Q5RAU7|BRE1B_PONAB E3 ubiquitin-protein ligase BRE1B OS=Pongo abelii GN=RNF40 PE=2
SV=1
Length = 1001
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 229/547 (41%), Positives = 323/547 (59%), Gaps = 56/547 (10%)
Query: 12 SSSGQPPVKKVQ---------FEPIRIGPISTLEEMDIKVLKFQNKKLAQRIEQKNQVEH 62
SG PP KK+ EPIR+G IS+ EEMD+KVL+F+NKKLA+R+EQ+ E
Sbjct: 13 GGSG-PPEKKLSREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLAERLEQRQACED 71
Query: 63 ELRSRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIRILLQRFD--AETADESESKSQAALR 120
ELR RIE+LEKRQ DDA L +VNRYW QL+E + LL+ + E + E+
Sbjct: 72 ELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLRCHESQGELSSAPEAPGTQEGP 131
Query: 121 ALDVCAPPAYGNTNV---MCLAITDE-NEATTSFLMQLSTWDKEELDEKLANRVQVSKRA 176
D P G + + + + + +E +F++ L EE++ +L R++ SK A
Sbjct: 132 TCDGTPLPEPGTSELRDPLPMQLRPPLSEPALAFVVALGASSSEEVELELQGRMEFSKAA 191
Query: 177 VAKIIQAFDRLVQRNEKITMILKGELNNSNGDPIPSLDEAVREANIEIQTENRNLTEQNT 236
V+++++A DRL +R E++ + S GD P L EA R E+ ENR L + T
Sbjct: 192 VSRVVEASDRLQRRVEELCQRV-----YSRGDSEP-LSEAARARTRELGRENRRLQDLAT 245
Query: 237 KLHAKYHSISLKISELQDAVNGKETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATE 296
+L K+H ISL+ SELQD V ET+ E+ ++DLQ+++ K++ R KL HL EA E
Sbjct: 246 QLQEKHHRISLEYSELQDKVTSAETKVLEMETTVEDLQWDIEKLRKREQKLNKHLAEALE 305
Query: 297 KVKLCQQMHTEDGKEKDVIKPEETMSNVSQKKLDDLQKDLEEAKELANNRLQELDKLHLQ 356
Q+++ + +S +K + L +LEE +ELAN+R+ EL+KL +
Sbjct: 306 ------QLNSGYYVSGSSSGFQGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQAE 359
Query: 357 HREALKDVEKLKMDWEVTFNNEISWLVWSVNPTSLTTQLPRQIRQLPESVIVETTEYKCL 416
+ A++ E+ K+ +R LPE V+ ET EY+ L
Sbjct: 360 LQGAVRTNERPKV----------------------------ALRSLPEEVVRETGEYRML 391
Query: 417 QSAYSVLYNENQLAKTQAQEFQSHLSASKNNQQRQIEMMETEELMVQKKLRGEMMQLEDA 476
Q+ +S+LYNE+ KTQ E + L A+KN+ R IE ME++EL +QKKLR E++QLED
Sbjct: 392 QAQFSLLYNESLQVKTQLDEARGLLLATKNSHLRHIEHMESDELGLQKKLRTEVIQLEDT 451
Query: 477 LSQIRKEYEMLRIEFETNLAANEQTGPINREMRHLITSLQNHNKQIKGEVNRYKRKYKET 536
L+Q+RKEYEMLRIEFE NLAANEQ GPINREMRHLI+SLQNHN Q+KG+ RYKRK +E
Sbjct: 452 LAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLISSLQNHNHQLKGDAQRYKRKLREV 511
Query: 537 SAEIQKV 543
AEI K+
Sbjct: 512 QAEIGKL 518
>sp|Q3U319|BRE1B_MOUSE E3 ubiquitin-protein ligase BRE1B OS=Mus musculus GN=Rnf40 PE=2
SV=2
Length = 1001
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 233/558 (41%), Positives = 331/558 (59%), Gaps = 59/558 (10%)
Query: 5 GVDCEDASSSGQ--PPVKKVQ---------FEPIRIGPISTLEEMDIKVLKFQNKKLAQR 53
G+ + A+ G PP KK+ EPIR+G IS+ EEMD KVL+F+NKKLA+R
Sbjct: 3 GLSNKRAAGDGGSGPPEKKMNREEKTTTTLIEPIRLGGISSTEEMDSKVLQFKNKKLAER 62
Query: 54 IEQKNQVEHELRSRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIRILLQRFDAETADESES 113
+EQ+ E ELR RIE+LEKRQ DDA L +VNRYW QL+E + LLQ ++ + S +
Sbjct: 63 LEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLQCYENQRELSSGT 122
Query: 114 KSQAALRAL--DVCAPPAYGNTNVM-CLAI---TDENEATTSFLMQLSTWDKEELDEKLA 167
+ L DV P G +++ L + +E +F++ L EE++ +L
Sbjct: 123 EVPGCQEGLTRDVIPRPDPGTSDLREPLPVQFRAPLSEPALAFVVALGASSCEEVELQLQ 182
Query: 168 NRVQVSKRAVAKIIQAFDRLVQRNEKITMILKGELNNSNGDPIPSLDEAVREANIEIQTE 227
R++ SK AV+++++A DRL ++ E++ + S GD + E R E+ E
Sbjct: 183 GRMEFSKAAVSRVVEASDRLQRQVEELCQRV-----YSRGDS-EAPGEVARVRTRELGRE 236
Query: 228 NRNLTEQNTKLHAKYHSISLKISELQDAVNGKETEAAELRNQIDDLQYELSKVQSRNDKL 287
NR L + T+L K+H ISL+ SELQD V ET+ E+ ++DLQ+++ K++ R KL
Sbjct: 237 NRRLQDLATQLQEKHHRISLEYSELQDKVTSTETKVLEMETTVEDLQWDIEKLRKREQKL 296
Query: 288 ENHLLEATEKVKLCQQMH-TEDGKEKDVIKPEETMSNVSQKKLDDLQKDLEEAKELANNR 346
HL EA E++ + + G + I +S +K + L +LEE +ELAN+R
Sbjct: 297 NKHLAEALEQLNSGYYVSGSSTGFQGGQI-------TLSMQKFEMLNAELEENQELANSR 349
Query: 347 LQELDKLHLQHREALKDVEKLKMDWEVTFNNEISWLVWSVNPTSLTTQLPRQIRQLPESV 406
+ EL+KL + + A++ E+LK+ +R LPE V
Sbjct: 350 MAELEKLQAELQGAVRTNERLKV----------------------------ALRSLPEEV 381
Query: 407 IVETTEYKCLQSAYSVLYNENQLAKTQAQEFQSHLSASKNNQQRQIEMMETEELMVQKKL 466
+ ET EY+ LQ+ +S+LYNE+ KTQ E + L ASKN+ R IE ME++EL +QKKL
Sbjct: 382 VRETGEYRMLQAQFSLLYNESLQVKTQLDEARGLLLASKNSHLRHIEHMESDELGLQKKL 441
Query: 467 RGEMMQLEDALSQIRKEYEMLRIEFETNLAANEQTGPINREMRHLITSLQNHNKQIKGEV 526
R E++QLED L+Q+RKEYEMLRIEFE NLAANEQ GPINREMRHLI+SLQNHN Q+KG+
Sbjct: 442 RTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLISSLQNHNHQLKGDA 501
Query: 527 NRYKRKYKETSAEIQKVR 544
RYKRK +E AEI K+R
Sbjct: 502 QRYKRKLREVQAEIGKLR 519
>sp|Q8CJB9|BRE1B_RAT E3 ubiquitin-protein ligase BRE1B OS=Rattus norvegicus GN=Rnf40
PE=1 SV=1
Length = 1002
Score = 361 bits (927), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 236/584 (40%), Positives = 337/584 (57%), Gaps = 65/584 (11%)
Query: 5 GVDCEDASSSGQ--PPVKKVQ---------FEPIRIGPISTLEEMDIKVLKFQNKKLAQR 53
G+ + A+ G PP KK+ EPIR+G IS+ EEMD KVL+F+NKKLA+R
Sbjct: 3 GLSNKRAAGDGGSGPPEKKLNREEKTTTTLIEPIRLGGISSTEEMDSKVLQFKNKKLAER 62
Query: 54 IEQKNQVEHELRSRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIRILLQRFD-----AETA 108
+EQ+ E ELR RIE+LEKRQ DDA L +VNRYW QL+E + LLQ ++ + +
Sbjct: 63 LEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLQCYENQRELSSSG 122
Query: 109 DESESKSQAALRALDVCAPPAYGNTNV---MCLAITDE-NEATTSFLMQLSTWDKEELDE 164
E + R DV G +++ + + +E +F++ L EE++
Sbjct: 123 TEVPGCQEGLTR--DVIPRTDPGTSDLREPLPMQFRAPLSEPALAFVVALGASSCEEVEL 180
Query: 165 KLANRVQVSKRAVAKIIQAFDRLVQRNEKITMILKGELNNSNGDPIPSLDEAVREANIEI 224
+L R++ SK AV+++++A DRL ++ E++ + S GD + E R E+
Sbjct: 181 QLQGRMEFSKAAVSRVVEASDRLQRQVEELCQRV-----YSRGDS-EAPGEVARARTREL 234
Query: 225 QTENRNLTEQNTKLHAKYHSISLKISELQDAVNGKETEAAELRNQIDDLQYELSKVQSRN 284
ENR L + T+L K+H ISL+ SELQD V ET+ E+ ++DLQ+++ K++ R
Sbjct: 235 GRENRRLQDLATQLQEKHHRISLEYSELQDKVTSTETKVLEMETTVEDLQWDIEKLRKRE 294
Query: 285 DKLENHLLEATEKVKLCQQMH-TEDGKEKDVIKPEETMSNVSQKKLDDLQKDLEEAKELA 343
KL HL EA E++ + + G + I +S +K + L +LEE +ELA
Sbjct: 295 QKLNKHLAEALEQLNSGYYVSGSSTGFQGGQI-------TLSMQKFEMLNAELEENQELA 347
Query: 344 NNRLQELDKLHLQHREALKDVEKLKMDWEVTFNNEISWLVWSVNPTSLTTQLPRQIRQLP 403
N+R+ EL+KL + + A++ E+LK+ +R LP
Sbjct: 348 NSRMAELEKLQAELQGAVRTNERLKV----------------------------ALRSLP 379
Query: 404 ESVIVETTEYKCLQSAYSVLYNENQLAKTQAQEFQSHLSASKNNQQRQIEMMETEELMVQ 463
E V+ ET EY+ LQ+ +S+LYNE+ KTQ E + L ASKN+ R IE ME++EL +Q
Sbjct: 380 EEVVRETGEYRMLQAQFSLLYNESLQVKTQLDEARGLLLASKNSHLRHIEHMESDELGLQ 439
Query: 464 KKLRGEMMQLEDALSQIRKEYEMLRIEFETNLAANEQTGPINREMRHLITSLQNHNKQIK 523
KKLR E++QLED L+Q+RKEYEMLRIEFE NLAANEQ GPINREMRHLI+SLQNHN Q+K
Sbjct: 440 KKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLISSLQNHNHQLK 499
Query: 524 GEVNRYKRKYKETSAEIQKVRISERSPWPSGYRL-HAGGSGFDS 566
G+ RYKRK +E AEI K+R G L H SG ++
Sbjct: 500 GDAQRYKRKLREVQAEIGKLRAQASGSSHCGPNLSHPDDSGLNA 543
>sp|Q5ZLS3|BRE1A_CHICK E3 ubiquitin-protein ligase BRE1A OS=Gallus gallus GN=RNF20 PE=2
SV=1
Length = 984
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 218/546 (39%), Positives = 318/546 (58%), Gaps = 69/546 (12%)
Query: 17 PPVKKV-------QFEPIRIGPISTLEEMDIKVLKFQNKKLAQRIEQKNQVEHELRSRIE 69
PP KK E I++G +S+ EE+DI+ L+ +N+KLA+ ++Q+ +E ELR IE
Sbjct: 18 PPEKKAGVEDSGTTVETIKLGGVSSTEELDIRTLQTKNRKLAEMLDQRQAIEDELREHIE 77
Query: 70 QLEKRQTQDDAVLNVVNRYWNQLNEDIRILLQRFDAETADESESKSQAALRALDVCAPPA 129
+LE+RQ DDA L ++NRYWNQ +E+IRI+L+RFD D+ + +AL V P
Sbjct: 78 KLERRQATDDASLLIINRYWNQFDENIRIILKRFDL---DQGLGDLLSERKALVVPEPEP 134
Query: 130 YGNTNVMCLAITDENE------ATTSFLMQLSTWDKEELDEKLANRVQVSKRAVAKIIQA 183
++N DE E SFL L++ EE++ +L RV+ S+RAVA+I+
Sbjct: 135 DSDSNQ---ERKDERERGEGLEPAFSFLATLASSTSEEIESQLQERVESSRRAVAQIVTM 191
Query: 184 FDRLVQRNEKITMILKGELNNSNGDPIPSLDEAVREANIEIQTENRNLTEQNTKLHAKYH 243
+D+L EK+ +L +LN+ GD I ++EAV E N + EN L E L K+
Sbjct: 192 YDKL---QEKVD-VLSHKLNS--GD-ISLMEEAVLELNSYLSHENGRLQELADTLQEKHR 244
Query: 244 SISLKISELQDAVNGKETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVKLCQQ 303
+S + S+LQ+ V E+ + L IDDLQ+ + K++ R +L HL + E+V
Sbjct: 245 IMSQEFSKLQEKVETAESRVSVLETMIDDLQWNIDKIRKREQRLNRHLADVLERV----- 299
Query: 304 MHTEDGKEKDVIKPEETMSN----VSQKKLDDLQKDLEEAKELANNRLQELDKLHLQHRE 359
+ K V ++ ++ +K +++ +LEE KELA NRL EL
Sbjct: 300 ----NSKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAGNRLNEL--------- 346
Query: 360 ALKDVEKLKMDW-EVTFNNEISWLVWSVNPTSLTTQLPRQIRQLPESVIVETTEYKCLQS 418
E+L+ D EVT NE +L ++R+ E + ET EY+C+QS
Sbjct: 347 -----EELRHDLQEVTTQNE---------------KLKVELRRAVEEAVKETPEYRCMQS 386
Query: 419 AYSVLYNENQLAKTQAQEFQSHLSASKNNQQRQIEMMETEELMVQKKLRGEMMQLEDALS 478
+SVLYNE+ K E ++ L ++ QRQ+E++E +E+ + KKLR E+MQLED L+
Sbjct: 387 QFSVLYNESLQLKAHLDEARTLLHGTRTTHQRQVELIERDEVSLHKKLRTEVMQLEDTLA 446
Query: 479 QIRKEYEMLRIEFETNLAANEQTGPINREMRHLITSLQNHNKQIKGEVNRYKRKYKETSA 538
Q+RKEYEMLRIEFE LAANEQ GPINREMRHLI+SLQNHN Q+KGEV RYKRK +E +
Sbjct: 447 QVRKEYEMLRIEFEQTLAANEQAGPINREMRHLISSLQNHNHQLKGEVLRYKRKLREAQS 506
Query: 539 EIQKVR 544
++ K+R
Sbjct: 507 DLSKIR 512
>sp|Q5DTM8|BRE1A_MOUSE E3 ubiquitin-protein ligase BRE1A OS=Mus musculus GN=Rnf20 PE=1
SV=2
Length = 973
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 215/548 (39%), Positives = 320/548 (58%), Gaps = 63/548 (11%)
Query: 13 SSGQPPVKKVQFE-------PIRIGPISTLEEMDIKVLKFQNKKLAQRIEQKNQVEHELR 65
+ PP KK E I++G +S+ EE+DI+ L+ +N+KLA+ ++Q+ +E ELR
Sbjct: 14 GTSMPPEKKTAVEDSGTTVETIKLGGVSSTEELDIRTLQSKNRKLAEMLDQRQAIEDELR 73
Query: 66 SRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIRILLQRFDAETADESESKSQAALRALDVC 125
IE+LE+RQ DDA L +VNRYW+Q +E+IRI+L+R+D D+ +AL V
Sbjct: 74 EHIEKLERRQATDDASLLIVNRYWSQFDENIRIILKRYDL---DQGLGDLLTERKALVVP 130
Query: 126 APPAYGNTNVM---CLAITDENEATTSFLMQLSTWDKEELDEKLANRVQVSKRAVAKIIQ 182
P ++N D E SFL L++ EE++ +L RV+ S+RAV++I+
Sbjct: 131 EPEPDSDSNQERKDDRERGDGQEPAFSFLATLASSSSEEMESQLQERVESSRRAVSQIVT 190
Query: 183 AFDRLVQRNEKITMILKGELNNSNGDPIPSLDEAVREANIEIQTENRNLTEQNTKLHAKY 242
+D+L EK+ + L +LN+ GD + ++EAV+E N + EN L E L K+
Sbjct: 191 VYDKL---QEKVDL-LSRKLNS--GDNLI-VEEAVQELNSFLAQENVRLQELTDLLQEKH 243
Query: 243 HSISLKISELQDAVNGKETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVKLCQ 302
H++S + +LQ V E+ + L + IDDLQ+++ K++ R +L HL E E+V
Sbjct: 244 HTMSQEFCKLQGKVETAESRVSVLESMIDDLQWDIDKIRKREQRLNRHLAEVLERV---- 299
Query: 303 QMHTEDGKEKDVIKPEETMSN----VSQKKLDDLQKDLEEAKELANNRLQELDKLHLQHR 358
+ K V ++ ++ +K +++ +LEE KELA NR EL
Sbjct: 300 -----NSKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAQNRHCEL-------- 346
Query: 359 EALKDVEKLKMDWE-VTFNNEISWLVWSVNPTSLTTQLPRQIRQLPESVIVETTEYKCLQ 417
EKL+ D+E VT NE +L ++R E V+ ET EY+C+Q
Sbjct: 347 ------EKLRQDFEEVTTQNE---------------KLKVELRSAVEEVVKETPEYRCMQ 385
Query: 418 SAYSVLYNENQLAKTQAQEFQSHLSASKNNQQRQIEMMETEELMVQKKLRGEMMQLEDAL 477
S +SVLYNE+ K E ++ L ++ QRQ+E++E +E+ + KKLR E++QLED L
Sbjct: 386 SQFSVLYNESLQLKAHLDEARTLLHGTRGTHQRQVELIERDEVSLHKKLRTEVIQLEDTL 445
Query: 478 SQIRKEYEMLRIEFETNLAANEQTGPINREMRHLITSLQNHNKQIKGEVNRYKRKYKETS 537
+Q+RKEYEMLRIEFE LAANEQ GPINREMRHLI+SLQNHN Q+KGEV RYKRK +E
Sbjct: 446 AQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLISSLQNHNHQLKGEVLRYKRKLREAQ 505
Query: 538 AEIQKVRI 545
+++ K R+
Sbjct: 506 SDLNKTRL 513
>sp|A2VDP1|BRE1A_BOVIN E3 ubiquitin-protein ligase BRE1A OS=Bos taurus GN=RNF20 PE=2 SV=1
Length = 975
Score = 325 bits (833), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 213/544 (39%), Positives = 319/544 (58%), Gaps = 63/544 (11%)
Query: 17 PPVKKVQFE-------PIRIGPISTLEEMDIKVLKFQNKKLAQRIEQKNQVEHELRSRIE 69
PP KK E I++G +S+ EE+DI+ L+ +N+KLA+ ++Q+ +E ELR IE
Sbjct: 18 PPEKKTAVEDSGTTVETIKLGGVSSTEELDIRTLQTKNRKLAEMLDQRQAIEDELREHIE 77
Query: 70 QLEKRQTQDDAVLNVVNRYWNQLNEDIRILLQRFDAETADESESKSQAALRALDVCAPPA 129
+LE+RQ DDA L +VNRYW+Q +E+IRI+L+R+D E + +AL V P
Sbjct: 78 KLERRQATDDASLLIVNRYWSQFDENIRIILKRYDLE---QGLGDLLTERKALVVPEPEP 134
Query: 130 YGNTNVMCLAITDENEA---TTSFLMQLSTWDKEELDEKLANRVQVSKRAVAKIIQAFDR 186
++N + E SFL L++ EE++ +L RV+ S+RAV++I+ +D+
Sbjct: 135 DSDSNQERKDDRERGEGQEPAFSFLATLASSSSEEMESQLQERVESSRRAVSQIVTVYDK 194
Query: 187 LVQRNEKITMILKGELNNSNGDPIPSLDEAVREANIEIQTENRNLTEQNTKLHAKYHSIS 246
L ++ E +L +LN+ GD + ++EAV+E N + EN L E L K+ ++S
Sbjct: 195 LQEKVE----LLSRKLNS--GDSL-MVEEAVQELNSFLAQENTRLQELTDLLQEKHCTMS 247
Query: 247 LKISELQDAVNGKETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVKLCQQMHT 306
+ S+LQ V E+ + L + IDDLQ+++ K++ R +L HL E E+V
Sbjct: 248 QEFSKLQSKVETAESRVSVLESMIDDLQWDIDKIRKREQRLNRHLAEVLERV-------- 299
Query: 307 EDGKEKDVIKPEETMSN----VSQKKLDDLQKDLEEAKELANNRLQELDKLHLQHREALK 362
+ K V ++ ++ +K +++ +LEE KELA NR EL
Sbjct: 300 -NSKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAQNRHCEL------------ 346
Query: 363 DVEKLKMDWE-VTFNNEISWLVWSVNPTSLTTQLPRQIRQLPESVIVETTEYKCLQSAYS 421
EKL+ D+E VT NE +L ++R E V+ ET EY+C+QS +S
Sbjct: 347 --EKLRQDFEEVTSQNE---------------KLKVELRSAVEEVVKETPEYRCMQSQFS 389
Query: 422 VLYNENQLAKTQAQEFQSHLSASKNNQQRQIEMMETEELMVQKKLRGEMMQLEDALSQIR 481
VLYNE+ K E ++ L ++ QRQ+E++E +E+ + KKLR E++QLED L+Q+R
Sbjct: 390 VLYNESLQLKAHLDEARTLLHGTRGTHQRQVELIERDEVSLHKKLRTEVIQLEDTLAQVR 449
Query: 482 KEYEMLRIEFETNLAANEQTGPINREMRHLITSLQNHNKQIKGEVNRYKRKYKETSAEIQ 541
KEYEMLRIEFE LAANEQ GPINREMRHLI+SLQNHN Q+KGEV RYKRK +E +++
Sbjct: 450 KEYEMLRIEFEQTLAANEQAGPINREMRHLISSLQNHNHQLKGEVLRYKRKLREAQSDLN 509
Query: 542 KVRI 545
K R+
Sbjct: 510 KTRL 513
>sp|Q5VTR2|BRE1A_HUMAN E3 ubiquitin-protein ligase BRE1A OS=Homo sapiens GN=RNF20 PE=1
SV=2
Length = 975
Score = 325 bits (832), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 213/548 (38%), Positives = 320/548 (58%), Gaps = 63/548 (11%)
Query: 13 SSGQPPVKKVQFE-------PIRIGPISTLEEMDIKVLKFQNKKLAQRIEQKNQVEHELR 65
+ PP KK E I++G +S+ EE+DI+ L+ +N+KLA+ ++Q+ +E ELR
Sbjct: 14 GTSMPPEKKAAVEDSGTTVETIKLGGVSSTEELDIRTLQTKNRKLAEMLDQRQAIEDELR 73
Query: 66 SRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIRILLQRFDAETADESESKSQAALRALDVC 125
IE+LE+RQ DDA L +VNRYW+Q +E+IRI+L+R+D E + +AL V
Sbjct: 74 EHIEKLERRQATDDASLLIVNRYWSQFDENIRIILKRYDLE---QGLGDLLTERKALVVP 130
Query: 126 APPAYGNTNVMCLAITDENEA---TTSFLMQLSTWDKEELDEKLANRVQVSKRAVAKIIQ 182
P ++N + E SFL L++ EE++ +L RV+ S+RAV++I+
Sbjct: 131 EPEPDSDSNQERKDDRERGEGQEPAFSFLATLASSSSEEMESQLQERVESSRRAVSQIVT 190
Query: 183 AFDRLVQRNEKITMILKGELNNSNGDPIPSLDEAVREANIEIQTENRNLTEQNTKLHAKY 242
+D+L ++ E +L +LN+ GD + ++EAV+E N + EN L E L K+
Sbjct: 191 VYDKLQEKVE----LLSRKLNS--GDNLI-VEEAVQELNSFLAQENMRLQELTDLLQEKH 243
Query: 243 HSISLKISELQDAVNGKETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVKLCQ 302
++S + S+LQ V E+ + L + IDDLQ+++ K++ R +L HL E E+V
Sbjct: 244 RTMSQEFSKLQSKVETAESRVSVLESMIDDLQWDIDKIRKREQRLNRHLAEVLERV---- 299
Query: 303 QMHTEDGKEKDVIKPEETMSN----VSQKKLDDLQKDLEEAKELANNRLQELDKLHLQHR 358
+ K V ++ ++ +K +++ +LEE KELA NRL EL
Sbjct: 300 -----NSKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAQNRLCEL-------- 346
Query: 359 EALKDVEKLKMDWE-VTFNNEISWLVWSVNPTSLTTQLPRQIRQLPESVIVETTEYKCLQ 417
EKL+ D+E VT NE +L ++R E V+ ET EY+C+Q
Sbjct: 347 ------EKLRQDFEEVTTQNE---------------KLKVELRSAVEQVVKETPEYRCMQ 385
Query: 418 SAYSVLYNENQLAKTQAQEFQSHLSASKNNQQRQIEMMETEELMVQKKLRGEMMQLEDAL 477
S +SVLYNE+ K E ++ L ++ Q Q+E++E +E+ + KKLR E++QLED L
Sbjct: 386 SQFSVLYNESLQLKAHLDEARTLLHGTRGTHQHQVELIERDEVSLHKKLRTEVIQLEDTL 445
Query: 478 SQIRKEYEMLRIEFETNLAANEQTGPINREMRHLITSLQNHNKQIKGEVNRYKRKYKETS 537
+Q+RKEYEMLRIEFE LAANEQ GPINREMRHLI+SLQNHN Q+KGEV RYKRK +E
Sbjct: 446 AQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLISSLQNHNHQLKGEVLRYKRKLREAQ 505
Query: 538 AEIQKVRI 545
+++ K R+
Sbjct: 506 SDLNKTRL 513
>sp|P34537|BRE1_CAEEL E3 ubiquitin-protein ligase bre-1 OS=Caenorhabditis elegans
GN=rfp-1 PE=1 SV=2
Length = 837
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 120/559 (21%), Positives = 247/559 (44%), Gaps = 83/559 (14%)
Query: 2 SKRGVDCEDASSS----GQPPVKKVQFEPIRIGPISTLEEMDIKVLKFQNKKLAQRIEQK 57
S G+ E+ +SS GQ +K+QFEP+R+ +S + ++ + + +Q KL Q++ K
Sbjct: 5 SNEGIGGENYASSPSDDGQQKRRKIQFEPVRMPAVSNVNDIRARAVVYQTSKLKQQLLYK 64
Query: 58 NQVEHELRSRIEQLEKRQTQDDA-VLNVVNRYWNQLNEDIRILLQRFDAETADESESKSQ 116
N+ EL E+ ++RQ D++ L V N + D E +++K++
Sbjct: 65 NKRIAELEKENERSKRRQQTDESNFLKVYNMFS--------------DIEKYICTQTKNE 110
Query: 117 AALRALDVCAPPAYGNTNVMCLAITDENEATTSFLMQLSTWDKEELDEKLANRVQVSKRA 176
AP T + L +T NE F Q K+ L R A
Sbjct: 111 FGEYIGGDTAP-----TGIDVLGMT--NETYNKFFDQA----KQNL------RNAFVSYA 153
Query: 177 VAKIIQAFDRLVQRNEKITMILKGELNNSNGDPIPSLDEAVREANIEIQTENRNLTEQNT 236
A+ +A + + +K+ ++ N NG + + A++ IQ N L + T
Sbjct: 154 KARHDRAHESTI-FIDKLKTLIDSPTFNPNG---VHKELTAKAASLAIQ--NEKLQSEVT 207
Query: 237 KLHAKYHSISLKISELQDAVNGKETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATE 296
K+ + +++ K L D ++ +E EL +Q++D ++E K +K E L
Sbjct: 208 KVQSDCYNLERKKRILTDKLSVQENRVQELEHQLEDARFETDKHMRLANKFEYKLATLVS 267
Query: 297 KVK-------LCQQMHTEDGKEKDVIKPEETMSNVSQKKLDDLQKDLEEAKELANNRLQE 349
+ + T + EK + P+ S + K++++L+ + +E + +A+ RLQ+
Sbjct: 268 EGQSGGNGGATPSSSGTTNATEKKISAPDIPPSETAAKEIENLRLERDEQESIASRRLQD 327
Query: 350 LDKLHLQHREALKDVEKLKMDWEVTFNNEISWLVWSVNPTSLTTQLPRQIRQLPESVIVE 409
L++++ + + ++ KL+++ + F SV+ IV
Sbjct: 328 LEEMNKKVQTLTQENSKLRLETQTFF---------SVDS------------------IVN 360
Query: 410 TTEYKCLQSAYSVLYNENQLAKTQAQEFQSHLSASKNNQQRQIEMMETEELMVQKKLRGE 469
+ EYK L+ YS+ E + ++ + A ++ ++ + +M E K+++ +
Sbjct: 361 SEEYKNLKKYYSLAIKEYERVSKDLEDITTERDAFRSAKEARAMLMSEEHQKTLKEIQCQ 420
Query: 470 MMQLEDALSQIRKEYEMLRIEFETNLAANEQTGPINR----EMRHLITSLQNHNKQIKGE 525
+ ++ ++ + E+LR EFET E + + EM+ + +L++ N+ +K E
Sbjct: 421 -SDIHNSFYKVSHDSEVLRCEFET--VKEEYNKTVKQSEWDEMKATLNTLRSMNRSLKSE 477
Query: 526 VNRYKRKYKETSAEIQKVR 544
R + K K++ +I ++
Sbjct: 478 KIRLREKDKQSQKDINTLK 496
>sp|Q9C895|BRE1B_ARATH E3 ubiquitin-protein ligase BRE1-like 2 OS=Arabidopsis thaliana
GN=HUB2 PE=1 SV=2
Length = 900
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 159/354 (44%), Gaps = 50/354 (14%)
Query: 12 SSSGQPPVKKVQF-----EPIRIGPISTLEEMDIKVLKFQNKKLAQRIEQKNQVEHELRS 66
SS P K V F + + + ++D VL+ QN+KL Q+++ + + +++ S
Sbjct: 29 SSPSHPIAKSVSFFDCDFSLLCLRLVDYEIDVDATVLQLQNQKLVQQLDLQKKQLYDVES 88
Query: 67 RIEQLEKRQTQDDAVLNVVNRYWNQLNEDIRILLQRFDAETADESESKSQAALRALDVC- 125
+I++L+ QT D L VN+ WNQL +D+ +L R A +Q AL LD+
Sbjct: 89 KIQELQLNQTSYDDELISVNQLWNQLVDDLILLGVRAGA---------NQEALNYLDIVD 139
Query: 126 ---APPAYGNTNVMCLAITDENEATTSFLMQLSTWDKEELDE---KLANRVQVSKRAVAK 179
PP + +C L+Q+ + D + DE K+ + + + +
Sbjct: 140 KKRVPPCAADETFLC------------RLLQVDSLDTSKSDEVVRKVEEALALRHSSTME 187
Query: 180 IIQAFDRLVQRNEKITMILKGELNNSNGDPIPSLDEA---VREANIEIQTENRNLTEQNT 236
++ F+ + T K E + + + S ++A + N ++ E++NL E
Sbjct: 188 LMGLFENTID-----TQKTKAESISQSLHAVKSTEDATIQLSSINDLMKEESKNLREMID 242
Query: 237 KLHAKYHSISLKISELQDAVNGKETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATE 296
LH ++ S +I + + ++E L+ Q+++++ EL + + + L+ +
Sbjct: 243 ALHVRHKEHSEQIQAYISSHSTDQSELKHLKGQLEEIKAELEENRRKLITLK------MQ 296
Query: 297 KVKLCQQMHTEDGKEKDVIKPEETMSNVSQKKLDDLQKDLEEAKELANNRLQEL 350
K C+ T + PE+ V + KL +L+ ++E K +A RL EL
Sbjct: 297 KDAACEGHVTSPAIANGSLSPEKP---VDKTKLRELKDSIDEIKIMAEGRLSEL 347
>sp|Q86KL1|BRE1_DICDI Probable E3 ubiquitin-protein ligase bre1 OS=Dictyostelium
discoideum GN=bre1 PE=3 SV=1
Length = 1080
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 122/280 (43%), Gaps = 50/280 (17%)
Query: 11 ASSSGQPPVKKVQFE------PIRIGPISTLEEMDIKVLKFQNKKLAQRIEQKNQVEHEL 64
A S Q P KK+ PI PI D ++ FQN+ + R+E++ ++
Sbjct: 15 ADSESQRPSKKISLSSSEASVPIGGPPI------DQNLILFQNRAMKVRVEEQKIEINDR 68
Query: 65 RSRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIRILLQRFDAETADESESKSQAALRALDV 124
+I+QL + Q ++ + R W+QLN + +L+ R D E A+D
Sbjct: 69 EQKIKQLNTKIHQYKENISCLCRVWDQLNSGLDLLINRVDFEN-------------AMDN 115
Query: 125 CAPPAYGNTNVMCLAITDENEATTSFLMQLSTWD-KEELDEKLANRVQVSKRAVAKIIQA 183
P IT+ E +S++ + T D K LD+ L +VQ ++ +KI +A
Sbjct: 116 LLPKD---------NITESFEFLSSYITEPVTLDEKYTLDQSLQKKVQKTQSTFSKISKA 166
Query: 184 FDRLVQRNEKITMILKGELNNSNGDPIPSLDEAVREANIE--IQTENRNLTEQNTKLHAK 241
++ ++ + +LK + + ++ +IE ++ +N L++QN +
Sbjct: 167 LEKEHTLSKFVFRLLKSK-------------DGIKSNDIEKLLKEDNDKLSKQNQYIQNI 213
Query: 242 YHSISLKISELQDAVNGKETEAAELRNQIDDLQYELSKVQ 281
Y + ++ +L D +AA + +L+ EL K Q
Sbjct: 214 YDKVQIQFKQLTDQTTHLADQAAIYQQNNKELKLELEKSQ 253
>sp|Q60YN5|BRE1_CAEBR E3 ubiquitin-protein ligase bre-1 OS=Caenorhabditis briggsae
GN=rfp-1 PE=3 SV=1
Length = 828
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 123/567 (21%), Positives = 236/567 (41%), Gaps = 109/567 (19%)
Query: 5 GVDCEDASSSGQPP------VKKVQFEPIRIGPISTLEEMDIKVLKFQNKKLAQRIEQKN 58
G+ E ++S PP +++QFE +++ + ++ E+ + + Q KL Q + KN
Sbjct: 8 GIGGEGVANS--PPDDTQQKRRRIQFEAVKMPAVQSVTELRSRTVAIQAAKLRQTVLIKN 65
Query: 59 QVEHELRSRIEQLEKRQTQDDA-VLNVVNRYWNQLNEDIRILLQRFD-AETADE-SESKS 115
+ +L E+ ++RQ D++ L V N + L++F A+T DE E K
Sbjct: 66 KRISDLERENERAKRRQLTDESNFLKVYNLFSE---------LEKFIWAQTKDEFGEVK- 115
Query: 116 QAALRALDVCAPPAYGNTNVMCLAITDE------NEATTSFLMQLSTWDKEELDE--KLA 167
P A T+V +T E + A + + +++ K D + A
Sbjct: 116 ---------MTPSAPAGTDVQ--GMTSEQYHSFVDTAKGNLRIAFNSYAKARHDRTTETA 164
Query: 168 NRVQVSKRAVAKIIQAFDRLVQRNEKITMILKGELNNSNGDPIPSLDEAVREANIEIQTE 227
N + A K + A +L I I K EL + +D+ EA+ +Q+E
Sbjct: 165 NFI-----ARLKTLMADPKL-----NINDIHK-ELAAKTASLLAQIDKLQAEAH-RVQSE 212
Query: 228 NRNLTEQNTKLHAKYHSISLKISELQDAVNGKETEAAELRNQIDDLQYELSKVQSRNDKL 287
N NL + + K + +I E++ +++ +E K K
Sbjct: 213 NHNLERKRRHMVDKNTLLESRIQEMEKL--------------LEEAHFETEKQMRLACKY 258
Query: 288 ENHLL---EATEKVKLCQQMHTEDGKEKDVIKPEETMSNVSQKKLDDLQKDLEEAKELAN 344
E L+ EA T + EK + P S + ++++ L+ D +E +A
Sbjct: 259 EARLILEHEAASGNATASSSATLNQSEKKMGSPGSPPSESTSREIEALRADRDEQAAIAA 318
Query: 345 NRLQELDKLHLQHREALKDVEKLKMDWEVTFNNEISWLVWSVNPTSLTTQLPRQIRQLPE 404
RLQEL+ + + + +D+ KLKM+ + + +P
Sbjct: 319 RRLQELEDTNRKLQSMAQDISKLKMETQSS---------------------------VPS 351
Query: 405 SVIVETTEYKCLQSAYSVLYNENQLAKTQAQEF---QSHLSASKNNQQRQIEMMETEELM 461
VI + EY+ L+ YS+ E++ ++ + L + K N+++ MM E
Sbjct: 352 DVITNSEEYRNLKKYYSLAIKEHERICKDLEDVTVERDQLRSVKENREK---MMSEEHQK 408
Query: 462 VQKKLRGEMMQLEDALSQIRKEYEMLRIEFETNLAANEQTGPINR----EMRHLITSLQN 517
K+++ + ++ + ++ + E+LR EFET E + + EM+ + +L++
Sbjct: 409 TIKEIQHQ-SEIHNTFYRVSHDSEVLRAEFET--VKEEYNKTVKQSEWDEMKATVNTLRS 465
Query: 518 HNKQIKGEVNRYKRKYKETSAEIQKVR 544
NK +K ++ R K + K + E V+
Sbjct: 466 LNKTMKSQMQRMKDREKASQKEHSAVK 492
>sp|Q8RXD6|BRE1A_ARATH E3 ubiquitin-protein ligase BRE1-like 1 OS=Arabidopsis thaliana
GN=HUB1 PE=1 SV=1
Length = 878
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 160/369 (43%), Gaps = 68/369 (18%)
Query: 12 SSSGQPPVKKVQFEPI---------RIGPI---STLEEMDIKVLKFQNKKLAQRIEQKNQ 59
+S+G+P K+ F I + P S+ +++D VL+FQN KL+Q++E + Q
Sbjct: 2 ASTGEPDRKRRHFSSISPSEAAAAVKKQPFFWPSSEDKLDTAVLQFQNLKLSQKLEAQ-Q 60
Query: 60 VEHE-LRSRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIRILLQRFDAETADESESKSQAA 118
VE L ++ Q++++Q ++ L V++ W +L + R +S S +
Sbjct: 61 VECSILEDKLSQIKEKQLPYNSSLKTVHKSWEKLTASVESCSVR-----VSDSSSGAHRF 115
Query: 119 LRALDVCAPPAYGNTNVMCLAITDENEATTSFLMQLSTWDKEELDEKLANRVQVSKRAVA 178
+ D + PA N + L T E+++S + +++E N V S +
Sbjct: 116 VNKEDG-SSPAVKNDFINRLLETGATESSSSNICS------NQMEE---NGVNTS----S 161
Query: 179 KIIQAFDRLVQRNEKITMILKGEL------NNSNGDPIPSLDEAVREANIEIQTENRNLT 232
++ Q LV E + LK EL N D L A+ E EI++ +L
Sbjct: 162 QMTQTLYNLVAATEDLR-CLKDELYPTVLRTNLGKDLCGQL--ALSELESEIKSFRGDLD 218
Query: 233 EQNTKLHAKYHSISLKISELQDAVNGKETEAAELRNQIDD-------LQYELSKVQSRND 285
+ + K+ S+S ++ +DA + +R +++D +LS +++ D
Sbjct: 219 D----VLVKFKSLSRELQSHRDADAKVRVDLKRIRGELEDEVVELQQCNGDLSALRAERD 274
Query: 286 KLENHLLEATEKVKLCQQMHTEDGKEKDVIKPEETMSNVSQKKLDDLQKDLEEAKELANN 345
+ L ++ T D +E+D Q+ L D++ L+E LA+
Sbjct: 275 ATAGAFFPV---LSLGNKLATSD-RERD-----------KQRDLQDMETVLKELTVLASG 319
Query: 346 RLQELDKLH 354
RLQ+L LH
Sbjct: 320 RLQQLKNLH 328
>sp|Q336R3|BRE1B_ORYSJ E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp.
japonica GN=BRE1B PE=2 SV=1
Length = 844
Score = 40.8 bits (94), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 38 MDIKVLKFQNKKLAQRIEQKNQVEHELRSRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIR 97
MD L+++N+KL Q++E + L + ++L Q D L +N+ WNQL +D+
Sbjct: 1 MDAAALQYENQKLVQQLEAQKSKMRALEGKFKELRDEQCSYDNTLICLNKMWNQLIDDLV 60
Query: 98 IL 99
+L
Sbjct: 61 LL 62
>sp|A2ZAC2|BRE1B_ORYSI E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp.
indica GN=BRE1B PE=3 SV=2
Length = 844
Score = 40.8 bits (94), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 38 MDIKVLKFQNKKLAQRIEQKNQVEHELRSRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIR 97
MD L+++N+KL Q++E + L + ++L Q D L +N+ WNQL +D+
Sbjct: 1 MDAAALQYENQKLVQQLEAQKSKMRALEGKFKELRDEQCSYDNTLICLNKMWNQLIDDLV 60
Query: 98 IL 99
+L
Sbjct: 61 LL 62
>sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle OS=Cyprinus carpio PE=2 SV=2
Length = 1935
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M ++D + K +
Sbjct: 945 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMASQDESIAKLTKEK 997
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL+MD E
Sbjct: 998 KALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKLRMDLE 1050
>sp|Q9UKX2|MYH2_HUMAN Myosin-2 OS=Homo sapiens GN=MYH2 PE=1 SV=1
Length = 1941
Score = 36.2 bits (82), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 950 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDETIAKLTKEK 1002
Query: 319 ETMSNVSQKKLDDLQKDLEEAKELANNRL---QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L ++ Q++D L +L+ +KL+MD E
Sbjct: 1003 KALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDDLE----GSLEQEKKLRMDLE 1055
>sp|Q076A7|MYH2_CANFA Myosin-2 OS=Canis familiaris GN=MYH2 PE=3 SV=1
Length = 1940
Score = 36.2 bits (82), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 949 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDETIAKLTKEK 1001
Query: 319 ETMSNVSQKKLDDLQKDLEEAKELANNRL---QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L ++ Q++D L +L+ +KL+MD E
Sbjct: 1002 KALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDDLE----GSLEQEKKLRMDLE 1054
>sp|P02565|MYH3_CHICK Myosin-3 OS=Gallus gallus GN=MYH3 PE=2 SV=3
Length = 1940
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 949 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAALDETIAKLTKEK 1001
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL+MD E
Sbjct: 1002 KALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKLRMDLE 1054
>sp|Q8MJV1|MYH2_HORSE Myosin-2 OS=Equus caballus GN=MYH2 PE=2 SV=1
Length = 1937
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 946 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDETIAKLTKEK 998
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL+MD E
Sbjct: 999 KALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKLRMDLE 1051
>sp|Q9TV61|MYH1_PIG Myosin-1 OS=Sus scrofa GN=MYH1 PE=2 SV=1
Length = 1939
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 948 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDETIAKLTKEK 1000
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL+MD E
Sbjct: 1001 KALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKLRMDLE 1053
>sp|P13542|MYH8_MOUSE Myosin-8 OS=Mus musculus GN=Myh8 PE=1 SV=2
Length = 1937
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 947 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDENIAKLTKEK 999
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL+MD E
Sbjct: 1000 KALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKLRMDLE 1052
>sp|Q9TV63|MYH2_PIG Myosin-2 OS=Sus scrofa GN=MYH2 PE=2 SV=1
Length = 1939
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 948 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDETIAKLTKEK 1000
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL+MD E
Sbjct: 1001 KALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKLRMDLE 1053
>sp|Q076A5|MYH4_CANFA Myosin-4 OS=Canis familiaris GN=MYH4 PE=3 SV=1
Length = 1939
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 948 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDETIAKLTKEK 1000
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL+MD E
Sbjct: 1001 KALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKLRMDLE 1053
>sp|Q9BE40|MYH1_BOVIN Myosin-1 OS=Bos taurus GN=MYH1 PE=2 SV=2
Length = 1938
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 947 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDETIAKLTKEK 999
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL+MD E
Sbjct: 1000 KALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKLRMDLE 1052
>sp|Q9BE41|MYH2_BOVIN Myosin-2 OS=Bos taurus GN=MYH2 PE=2 SV=1
Length = 1940
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 949 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDETIAKLTKEK 1001
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL+MD E
Sbjct: 1002 KALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKLRMDLE 1054
>sp|P12882|MYH1_HUMAN Myosin-1 OS=Homo sapiens GN=MYH1 PE=1 SV=3
Length = 1939
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 948 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDETIAKLTKEK 1000
Query: 319 ETMSNVSQKKLDDLQKDLEEAKELANNRL---QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L ++ Q++D L +L+ +K++MD E
Sbjct: 1001 KALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDDLE----GSLEQEKKIRMDLE 1053
>sp|Q8MJV0|MYH1_HORSE Myosin-1 OS=Equus caballus GN=MYH1 PE=2 SV=1
Length = 1938
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 947 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDETIAKLTKEK 999
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL+MD E
Sbjct: 1000 KALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKLRMDLE 1052
>sp|Q9TV62|MYH4_PIG Myosin-4 OS=Sus scrofa GN=MYH4 PE=2 SV=1
Length = 1937
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 946 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDENIAKLTKEK 998
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL+MD E
Sbjct: 999 KALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKLRMDLE 1051
>sp|Q076A6|MYH1_CANFA Myosin-1 OS=Canis familiaris GN=MYH1 PE=3 SV=2
Length = 1939
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 948 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDETIAKLTKEK 1000
Query: 319 ETMSNVSQKKLDDLQKDLEEAKELANNRL---QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L ++ Q++D L +L+ +K++MD E
Sbjct: 1001 KALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDDLE----GSLEQEKKIRMDLE 1053
>sp|Q5SX39|MYH4_MOUSE Myosin-4 OS=Mus musculus GN=Myh4 PE=1 SV=1
Length = 1939
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 948 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDENIAKLTKEK 1000
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL+MD E
Sbjct: 1001 KALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKLRMDLE 1053
>sp|P13538|MYSS_CHICK Myosin heavy chain, skeletal muscle, adult OS=Gallus gallus PE=1 SV=4
Length = 1939
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 947 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAVLDETIAKLTKEK 999
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL+MD E
Sbjct: 1000 KALQEAHQQTLDDLQVEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKLRMDLE 1052
>sp|Q076A4|MYH8_CANFA Myosin-8 OS=Canis familiaris GN=MYH8 PE=3 SV=1
Length = 1939
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 949 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDETIAKLTKEK 1001
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ KL+MD E
Sbjct: 1002 KALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLE----GSLEQERKLRMDLE 1054
>sp|P13533|MYH6_HUMAN Myosin-6 OS=Homo sapiens GN=MYH6 PE=1 SV=5
Length = 1939
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 13/116 (11%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVKLCQQMHTEDGKEKDVIKPEE 319
E E +EL+ IDDL+ L+KV+ EN + TE++ ++ + KEK +
Sbjct: 946 EDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEK------K 999
Query: 320 TMSNVSQKKLDDLQKDLEEAKELANNRL---QELDKLHLQHREALKDVEKLKMDWE 372
+ Q+ LDDLQ + ++ L+ +++ Q++D L +L+ +K++MD E
Sbjct: 1000 ALQEAHQQALDDLQVEEDKVNSLSKSKVKLEQQVDDLE----GSLEQEKKVRMDLE 1051
>sp|P13539|MYH6_MESAU Myosin-6 OS=Mesocricetus auratus GN=MYH6 PE=2 SV=2
Length = 1939
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVKLCQQMHTEDGKEKDVIKPEE 319
E E +EL+ IDDL+ L+KV+ EN + TE++ ++ + KEK +
Sbjct: 946 EDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEK------K 999
Query: 320 TMSNVSQKKLDDLQKDLEEAKELANNRL---QELDKLHLQHREALKDVEKLKMDWE 372
+ Q+ LDDLQ + ++ L +++ Q++D L +L+ +K++MD E
Sbjct: 1000 ALQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDDLE----GSLEQEKKVRMDLE 1051
>sp|Q29RW1|MYH4_RAT Myosin-4 OS=Rattus norvegicus GN=Myh4 PE=2 SV=1
Length = 1939
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 948 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDENIVKLTKEK 1000
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL+MD E
Sbjct: 1001 KALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKLRMDLE 1053
>sp|P02563|MYH6_RAT Myosin-6 OS=Rattus norvegicus GN=Myh6 PE=2 SV=2
Length = 1938
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVKLCQQMHTEDGKEKDVIKPEE 319
E E +EL+ IDDL+ L+KV+ EN + TE++ ++ + KEK +
Sbjct: 945 EDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEK------K 998
Query: 320 TMSNVSQKKLDDLQKDLEEAKELANNRL---QELDKLHLQHREALKDVEKLKMDWE 372
+ Q+ LDDLQ + ++ L +++ Q++D L +L+ +K++MD E
Sbjct: 999 ALQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDDLE----GSLEQEKKVRMDLE 1050
>sp|Q02566|MYH6_MOUSE Myosin-6 OS=Mus musculus GN=Myh6 PE=1 SV=2
Length = 1938
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVKLCQQMHTEDGKEKDVIKPEE 319
E E +EL+ IDDL+ L+KV+ EN + TE++ ++ + KEK +
Sbjct: 946 EDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEK------K 999
Query: 320 TMSNVSQKKLDDLQKDLEEAKELANNRL---QELDKLHLQHREALKDVEKLKMDWE 372
+ Q+ LDDLQ + ++ L +++ Q++D L +L+ +K++MD E
Sbjct: 1000 ALQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDDLE----GSLEQEKKVRMDLE 1051
>sp|Q28641|MYH4_RABIT Myosin-4 OS=Oryctolagus cuniculus GN=MYH4 PE=2 SV=1
Length = 1938
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 947 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDETIAKLTKEK 999
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +K++MD E
Sbjct: 1000 KALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKIRMDLE 1052
>sp|P13540|MYH7_MESAU Myosin-7 OS=Mesocricetus auratus GN=MYH7 PE=2 SV=2
Length = 1934
Score = 33.9 bits (76), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVKLCQQMHTEDGKEKDVIKPEE 319
E E +EL+ IDDL+ L+KV+ EN + TE++ ++ + KEK +
Sbjct: 943 EDECSELKRDIDDLELTLAKVEKDKHATENKVKNLTEEMAGLDEIIAKLTKEK------K 996
Query: 320 TMSNVSQKKLDDLQKDLEEAKELANNRL---QELDKLHLQHREALKDVEKLKMDWE 372
+ Q+ LDDLQ + ++ L +++ Q++D L +L+ +K++MD E
Sbjct: 997 ALQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDDLE----GSLEQEKKVRMDLE 1048
>sp|P12883|MYH7_HUMAN Myosin-7 OS=Homo sapiens GN=MYH7 PE=1 SV=5
Length = 1935
Score = 33.9 bits (76), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVKLCQQMHTEDGKEKDVIKPEE 319
E E +EL+ IDDL+ L+KV+ EN + TE++ ++ + KEK +
Sbjct: 944 EDECSELKRDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEK------K 997
Query: 320 TMSNVSQKKLDDLQKDLEEAKELANNRL---QELDKLHLQHREALKDVEKLKMDWE 372
+ Q+ LDDLQ + ++ L ++ Q++D L +L+ +K++MD E
Sbjct: 998 ALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDDLE----GSLEQEKKVRMDLE 1049
>sp|Q91Z83|MYH7_MOUSE Myosin-7 OS=Mus musculus GN=Myh7 PE=1 SV=1
Length = 1935
Score = 33.5 bits (75), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVKLCQQMHTEDGKEKDVIKPEE 319
E E +EL+ IDDL+ L+KV+ EN + TE++ ++ + KEK +
Sbjct: 944 EDECSELKRDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIVKLTKEK------K 997
Query: 320 TMSNVSQKKLDDLQKDLEEAKELANNRL---QELDKLHLQHREALKDVEKLKMDWE 372
+ Q+ LDDLQ + ++ L ++ Q++D L +L+ +K++MD E
Sbjct: 998 ALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDDLE----GSLEQEKKVRMDLE 1049
>sp|P13535|MYH8_HUMAN Myosin-8 OS=Homo sapiens GN=MYH8 PE=1 SV=3
Length = 1937
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 947 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDETIAKLSKEK 999
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL+MD E
Sbjct: 1000 KALQETHQQTLDDLQAEEDKVNILTKAKTKLEQQVDDLE----GSLEQEKKLRMDLE 1052
>sp|P49824|MYH7_CANFA Myosin-7 OS=Canis familiaris GN=MYH7 PE=1 SV=3
Length = 1935
Score = 33.5 bits (75), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVKLCQQMHTEDGKEKDVIKPEE 319
E E +EL+ IDDL+ L+KV+ EN + TE++ ++ + KEK +
Sbjct: 944 EDECSELKRDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEK------K 997
Query: 320 TMSNVSQKKLDDLQKDLEEAKELANNRL---QELDKLHLQHREALKDVEKLKMDWE 372
+ Q+ LDDLQ + ++ L ++ Q++D L +L+ +K++MD E
Sbjct: 998 ALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDDLE----GSLEQEKKVRMDLE 1049
>sp|P29616|MYSC_CHICK Myosin heavy chain, cardiac muscle isoform (Fragment) OS=Gallus
gallus PE=1 SV=1
Length = 1102
Score = 33.1 bits (74), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 250 SELQDAVNGKETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTED 308
SEL E E +EL+ IDDL+ L+KV+ EN KVK L ++M T D
Sbjct: 100 SELTSKKRKLEDECSELKKDIDDLEITLAKVEKEKHATEN-------KVKNLTEEMATLD 152
Query: 309 GKEKDVIKPEETMSNVSQKKLDDLQ 333
+ K ++++ Q+ LDDLQ
Sbjct: 153 ENISKLTKEKKSLQEAHQQVLDDLQ 177
>sp|P02564|MYH7_RAT Myosin-7 OS=Rattus norvegicus GN=Myh7 PE=2 SV=2
Length = 1935
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVKLCQQMHTEDGKEKDVIKPEE 319
E E +EL+ IDDL+ L+KV+ EN + TE++ ++ + KEK +
Sbjct: 944 EDECSELKRDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIVKLTKEK------K 997
Query: 320 TMSNVSQKKLDDLQKDLEEAKELANNRL---QELDKLHLQHREALKDVEKLKMDWE 372
+ Q+ LDDLQ + ++ L ++ Q++D L +L +K++MD E
Sbjct: 998 ALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDDLE----GSLDQDKKVRMDLE 1049
>sp|Q9Y623|MYH4_HUMAN Myosin-4 OS=Homo sapiens GN=MYH4 PE=1 SV=2
Length = 1939
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVK-LCQQMHTEDGKEKDVIKPE 318
E E +EL+ IDDL+ L+KV+ EN KVK L ++M D + K +
Sbjct: 948 EDECSELKKDIDDLELTLAKVEKEKHATEN-------KVKNLTEEMAGLDETIAKLTKEK 1000
Query: 319 ETMSNVSQKKLDDLQKDLEEAKEL--ANNRL-QELDKLHLQHREALKDVEKLKMDWE 372
+ + Q+ LDDLQ + ++ L A +L Q++D L +L+ +KL MD E
Sbjct: 1001 KALQEAHQQTLDDLQMEEDKVNTLTKAKTKLEQQVDDLE----GSLEQEKKLCMDLE 1053
>sp|Q8MJU9|MYH7_HORSE Myosin-7 OS=Equus caballus GN=MYH7 PE=2 SV=1
Length = 1935
Score = 32.7 bits (73), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Query: 260 ETEAAELRNQIDDLQYELSKVQSRNDKLENHLLEATEKVKLCQQMHTEDGKEKDVIKPEE 319
E E +EL+ IDDL+ L+KV+ EN + TE++ ++ + KEK +
Sbjct: 944 EDECSELKRDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEK------K 997
Query: 320 TMSNVSQKKLDDLQKDLEEAKELANNRL---QELDKLHLQHREALKDVEKLKMDWE 372
+ Q+ LDDLQ + ++ L ++ Q +D L +L+ +K++MD E
Sbjct: 998 ALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQHVDDLE----GSLEQEKKVRMDLE 1049
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.127 0.347
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 197,879,083
Number of Sequences: 539616
Number of extensions: 7938405
Number of successful extensions: 47517
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 2175
Number of HSP's that attempted gapping in prelim test: 37939
Number of HSP's gapped (non-prelim): 7397
length of query: 584
length of database: 191,569,459
effective HSP length: 123
effective length of query: 461
effective length of database: 125,196,691
effective search space: 57715674551
effective search space used: 57715674551
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)