BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8073
(593 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q22908|RASEF_CAEEL Ras and EF-hand domain-containing protein homolog OS=Caenorhabditis
elegans GN=tag-312 PE=3 SV=2
Length = 656
Score = 261 bits (666), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 196/636 (30%), Positives = 310/636 (48%), Gaps = 89/636 (13%)
Query: 1 MSDLQLEELFKTCDKKGTGQIGPEEFRELCTGFDIQPTDSDAIFADLDHDGDGKVSLEDF 60
MS ++E LF CD + G + E+ R++C D D IF +LD DG GK+ +F
Sbjct: 1 MSKPEVENLFSLCDSESKGYLTMEDLRKVCPQLD--DNDLRFIFTELDQDGSGKIEKLEF 58
Query: 61 AYGFREF--------LNSDARRLKSNVNAGAM--------------SSEGPERRNSDVQN 98
GF++ LN RR V M +S P R D ++
Sbjct: 59 LRGFQDTVQHGESHGLNGMQRRASVAVEDPPMFLRDEQMFDSESDSTSSRPAIRVFDEEH 118
Query: 99 AWSLLLAGIGEANVH-KFLNTSGKKLADLYHELRTSSNCPEIVTHFEGALSSLLDDVKRL 157
S + N++ F +++ LY +L+ SS P ++ FE + S ++
Sbjct: 119 YHSE-----SDTNINIDFSVPCQEEVLVLYEQLQ-SSGVPALLRKFERVVGSFHKELSEK 172
Query: 158 HEDNEKLEEMFNREREVHLERLKGLEEELDVQVAKVVTQAKEEARAKYEQEKAILMRKME 217
+NE+L+ ++ ERE++ R++ +E E+D Q+ +A++E R + +EK + ++M
Sbjct: 173 KHENERLQRIYASEREMYNRRMEEMESEVDQQLELTEMKARQEERDRLTKEKEEMRQRMS 232
Query: 218 HETQELQAHLNLFQKVNNVL-KEKKIEKQQDPTSDH--NFSFENEELKITLEKTKNNLDL 274
E E++ ++ QK+ L +E + Q SD + EN +L+ L + L +
Sbjct: 233 DEMSEMRNNIERLQKMEKALERENERLNHQKELSDKLKVVNEENNDLRQNLAENHLELAM 292
Query: 275 VHAEMAQLKSEYEGKCQELNQLVGDYLELDQGSDKQFAIQ--RLMEDIDSGRSTMRDCMD 332
+ +E+AQ++ E++ K EL+ G +L+ + + Q E+ +S R ++ D
Sbjct: 293 IKSELAQVRCEFDQKQDELSARRGILFQLEPINSLSSSDQASHATEESESVRKQLQLLFD 352
Query: 333 CSSDYKSNNEENMSSLSEYDYNKRDY------PELRRQHSNKSDS--------QSTPLLS 378
+ NE +L R + P L + N ++ +S PL +
Sbjct: 353 ANRKLHETNESLRDALDSRASVLRQFNLRTPSPGLLSSNRNSVENFQTSTNVFRSVPLHA 412
Query: 379 LSNSLEPT-----------------------------------GEPDRAFKIVFAGDAAV 403
+S + T G +R F+IV GDAAV
Sbjct: 413 ISTEEQGTIFGTIEEKTSLILDDAHSLQGLDTPGDLMGLNDANGPAERTFRIVMCGDAAV 472
Query: 404 GKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTAGQERFRSMTKNYFR 463
GKS F+ R + F N+L STLGVDF +KT+ VD RNVALQLWDTAGQERFRS+ K+YFR
Sbjct: 473 GKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQERFRSLCKSYFR 532
Query: 464 RADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDLRADAQAKGVKCIDR 523
RADG +L+YDV E+SF V++W+E ++E TE SIPI++ NKVD+R K
Sbjct: 533 RADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVDMRISTPGSVAKTD-- 590
Query: 524 EVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
G +A G +FMETS+ G NI +A++AL+R +
Sbjct: 591 --GASMAAAMGVLFMETSALDGSNIDNAMLALTREL 624
>sp|Q619T5|RASEF_CAEBR Ras and EF-hand domain-containing protein homolog OS=Caenorhabditis
briggsae GN=tag-312 PE=3 SV=1
Length = 634
Score = 252 bits (643), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 190/615 (30%), Positives = 316/615 (51%), Gaps = 69/615 (11%)
Query: 1 MSDLQLEELFKTCDKKGTGQIGPEEFRELCTGFDIQPTDSDAIFADLDHDGDGKVSLEDF 60
M++ +E LF CD + G + E+ +++C D D IF +LD DG GK+ +F
Sbjct: 1 MANPDVENLFSLCDSESKGFLTMEDLKKVCPQLD--DNDLRFIFNELDRDGSGKIEKMEF 58
Query: 61 AYGFREF--------LNSDARRLKSNVNAGAM--------------SSEGPERRNSDVQN 98
GF+E LN RR + G SS P R D ++
Sbjct: 59 LQGFQETVQHGESRGLNGMQRRASVAFDDGGPVFRRDELVFESESDSSSRPAIRVYDEEH 118
Query: 99 AWSLLLAGIGEANVH-KFLNTSGKKLADLYHELRTSSNCPEIVTHFEGALSSLLDDVKRL 157
S + N++ F +++ LY +L+ SS P ++ FE + S ++
Sbjct: 119 YHSE-----SDTNINIDFSVPCQEEVLVLYEQLQ-SSGVPALLRKFERVVGSFHKELSEK 172
Query: 158 HEDNEKLEEMFNREREVHLERLKGLEEELDVQVAKVVTQAKEEARAKYEQEKAILMRKME 217
+NE+L+ ++ ERE++ R++ +E E+D Q+ + +A++E R + +EK + +M
Sbjct: 173 KHENERLQRIYASEREMYNRRMEEMESEVDQQLELIEMKARQEERERLTKEKEEMRERMS 232
Query: 218 HETQELQAHLNLFQKVNNVLKEK--KIEKQQDPTSDHNF-SFENEELKITLEKTKNNLDL 274
E E++ ++ Q++ VL+ + ++ Q+D + + EN +L+ L + L +
Sbjct: 233 EEMSEMRTNIERLQRMEKVLERENERLNHQKDLSDKLKVVNEENNDLRQNLAENHLELAM 292
Query: 275 VHAEMAQLKSEYEGKCQELNQL---VGDYLELDQGSDKQFAI------------QRLMED 319
+ +E+AQ++++++ K EL+ E + KQ + + L +
Sbjct: 293 IKSELAQVRADFDQKQDELSARRDQASHATEESESVRKQLQLLFDANRKLHETNESLRDA 352
Query: 320 IDSGRSTMR--DCMDCSSDYKSNNEENMSSLSEYDYNKRDYPELRRQHSNKSDSQSTPLL 377
+DS S +R + S ++N ++ + + P L + D +++ +L
Sbjct: 353 LDSRASVLRQFNLRTPSPGLINSNRNSVENFQTSTNMFKSVP-LHAISDEEPDPETSLIL 411
Query: 378 SLSNSLE-------------PTGEPDRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGST 424
++SL+ G +R F+IV GDAAVGKS F+ R + F N+L ST
Sbjct: 412 DDAHSLQGMDIAEGLVGLNDANGPAERTFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPST 471
Query: 425 LGVDFQMKTIRVDERNVALQLWDTAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVK 484
LGVDF +KT+ VD RNVALQLWDTAGQERFRS+ K+YFRRADG +L+YDV E SF V+
Sbjct: 472 LGVDFHVKTVNVDGRNVALQLWDTAGQERFRSLCKSYFRRADGAILVYDVCAEHSFLRVR 531
Query: 485 NWVEAVEEVTENSIPIVICANKVDLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKS 544
+W+E ++E TE SIPI++ NKVD+R Q G + + G +A G +FMETS+
Sbjct: 532 DWIETIKESTERSIPIILVGNKVDMR--LQTPG--AVAKTDGASMAAAMGVLFMETSALD 587
Query: 545 GDNILDALIALSRHV 559
G NI +A++AL+R +
Sbjct: 588 GSNIDNAMLALTREL 602
>sp|Q5RI75|RASEF_MOUSE Ras and EF-hand domain-containing protein homolog OS=Mus musculus
GN=Rasef PE=2 SV=1
Length = 627
Score = 212 bits (540), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 162/271 (59%), Gaps = 33/271 (12%)
Query: 321 DSGRSTMRD--CMDCSSDYKSNNEENMSSLSEY----DYNKRDYPELRRQHSNKSDSQST 374
DSG ST+RD C D DYK E +E D + D P++R + + S+S ++
Sbjct: 326 DSGLSTLRDNEC-DSEVDYKHQGEFQTLHRTEESLGGDASDTDVPDIRDEEAFDSESVAS 384
Query: 375 PL-----------LSLSNSLEPTGE---------------PDRAFKIVFAGDAAVGKSCF 408
L +LS+S +P +A+KIV AGDAAVGKS F
Sbjct: 385 VLHWQPQGSAGEGSTLSSSRKPISALSLQTDMVDNTSKVTSQKAYKIVLAGDAAVGKSSF 444
Query: 409 IYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTAGQERFRSMTKNYFRRADGV 468
+ R K F +TLGVDFQMKT+ VD LQLWDTAGQERFRS+ K+YFR+ADGV
Sbjct: 445 LMRLCKNEFQGNTSATLGVDFQMKTLIVDGEQTVLQLWDTAGQERFRSIAKSYFRKADGV 504
Query: 469 MLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDLRADAQAKGVKCIDREVGEK 528
+LLYDVT E+SF +V+ WV+ VE+ T +IPI++ NK DLR A+ KCI +GEK
Sbjct: 505 LLLYDVTCEKSFLNVREWVDMVEDGTHRTIPIMLVGNKADLRDVDNAENQKCISAYLGEK 564
Query: 529 LAQQYGAIFMETSSKSGDNILDALIALSRHV 559
LA YGA+F ETS+K G N+++A++ L+R V
Sbjct: 565 LAMTYGALFCETSAKDGSNVVEAVLHLAREV 595
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 95/186 (51%), Gaps = 13/186 (6%)
Query: 137 PEIVTHFEGALSSLLDDVKRLHEDNEKLEEMFNREREVHLERLKGLEEELDVQVAKVVTQ 196
P ++ +E + + L ++K + E L R ++ +L LEEE+D ++ V +
Sbjct: 49 PRLLQPYERVIRNFLREIKLQSTEMENLAIAVKRAQDKAAIQLSELEEEMDQRIQAVENE 108
Query: 197 AKEEARAKYEQEKAILMRKMEHETQELQAHLNLFQKVNNVLKEKKIEKQQDPTS----DH 252
++++ + K E+ L R+ E E +LQ + +K+ + ++I ++QD T+ H
Sbjct: 109 SRKDEKRKAEEALTDLRRQYETEVGDLQVTIKRLKKLEE--QSRQISQKQDVTALKKQIH 166
Query: 253 NFSFENEELKITLEKTKNNLDLVHAEMAQLKSEYEGKCQELN-----QLVGDYLELDQGS 307
+ + EN++LK L + + N+ + +E+ LKS+Y Q LN +++ +Y E
Sbjct: 167 DLTMENQKLKKELLEAQTNVAFLQSELDALKSDYAD--QSLNSERDLEIIREYTEDRSSL 224
Query: 308 DKQFAI 313
++Q I
Sbjct: 225 ERQIEI 230
>sp|Q8IZ41|RASEF_HUMAN Ras and EF-hand domain-containing protein OS=Homo sapiens GN=RASEF
PE=1 SV=1
Length = 740
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 124/169 (73%)
Query: 391 RAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTAG 450
+A+KIV AGDAAVGKS F+ R K F + +TLGVDFQMKT+ VD LQLWDTAG
Sbjct: 540 KAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAG 599
Query: 451 QERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDLR 510
QERFRS+ K+YFR+ADGV+LLYDVT E+SF +++ WV+ +E+ ++PI++ NK D+R
Sbjct: 600 QERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAHETVPIMLVGNKADIR 659
Query: 511 ADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
A +G KC+ GEKLA YGA+F ETS+K G NI++A++ L+R V
Sbjct: 660 DTAATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREV 708
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 149/307 (48%), Gaps = 32/307 (10%)
Query: 5 QLEELFKTCDKKGTGQIGPEEFRELCTGFDIQPTDSDAIFADLDHDGDGKVSLEDFAYGF 64
+L +F CD +G++ EEFR LCT ++P D++A+F LD D DG ++ ++FA GF
Sbjct: 12 RLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEFARGF 71
Query: 65 REFLNSDARRLKSNVN-AGAMSSEGPERRN--------------------SDVQNAWSLL 103
L RR ++ A A+S GPE + + AW
Sbjct: 72 LGSLRGGRRRDWGPLDPAPAVSEAGPETHDSEEDEGDEDAAAALATSCGPASPGRAWQDF 131
Query: 104 LAGIGEANVHKFLNTSGKKLADLYHELRTSSNCPEIVTHFEGALSSLLDDVKRLHEDNEK 163
A +G+ KF+ ++++ LY + P ++ +E + + + +++ + E
Sbjct: 132 QARLGDE--AKFIPRE-EQVSTLYQNINLVE--PRLIQPYEHVIKNFIREIRLQSTEMEN 186
Query: 164 LEEMFNREREVHLERLKGLEEELDVQVAKVVTQAKEEARAKYEQEKAILMRKMEHETQEL 223
L R ++ +L LEEE+D ++ + +++ + K E+ + L R+ E E +L
Sbjct: 187 LAIAVKRAQDKAAMQLSELEEEMDQRIQAAEHKTRKDEKRKAEEALSDLRRQYETEVGDL 246
Query: 224 QAHLNLFQKVNNVLKEKKIEKQQDPTS----DHNFSFENEELKITLEKTKNNLDLVHAEM 279
Q + +K+ + K++ +++D + ++ S EN+++K L + + N+ + +E+
Sbjct: 247 QVTIKKLRKLEE--QSKRVSQKEDVAALKKQIYDLSMENQKVKKDLLEAQTNIAFLQSEL 304
Query: 280 AQLKSEY 286
LKS+Y
Sbjct: 305 DALKSDY 311
>sp|Q08CX1|RASEF_XENTR Ras and EF-hand domain-containing protein OS=Xenopus tropicalis
GN=rasef PE=2 SV=1
Length = 722
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/276 (42%), Positives = 160/276 (57%), Gaps = 36/276 (13%)
Query: 320 IDSGRSTMRDC--MDCSSDYKSNNEENMSSLSEYDY----NKRDYPELRRQHSNKSDS-- 371
IDSG ST+RD D ++Y+ + S +Y + D PE+R + S D+
Sbjct: 414 IDSGLSTLRDSNEYDSEAEYRPPRIFHRSRFPHENYGGDASDTDVPEIRDEESYAPDNGG 473
Query: 372 -----QSTPLL--------------SLSNSLEPTGEPDR---------AFKIVFAGDAAV 403
S P+ +LS ++ D+ A+KIV AGDAAV
Sbjct: 474 NLDWKPSNPVSRSSSGASSSRKCISALSANVTSAETVDKVHKYTHAEKAYKIVLAGDAAV 533
Query: 404 GKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTAGQERFRSMTKNYFR 463
GKS F+ R K F +TLGVDFQMKT+ VD LQLWDTAGQERFRS+ K+YFR
Sbjct: 534 GKSSFLMRLCKNEFRGNTSATLGVDFQMKTLVVDGEPTILQLWDTAGQERFRSIAKSYFR 593
Query: 464 RADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDLRADAQAKGVKCIDR 523
RADGV+LLYDVT E+SF +V+ W++ +E+ T +IPI++ NK DLR +G C+
Sbjct: 594 RADGVLLLYDVTCEKSFLNVREWIDMIEDATSEAIPIMMVGNKADLRQLMAEQGHICVST 653
Query: 524 EVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
GEKL++ YGA+F ETS+K G NI++A++ L+R V
Sbjct: 654 NYGEKLSRTYGALFCETSAKEGSNIVEAVLHLAREV 689
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 22/294 (7%)
Query: 5 QLEELFKTCDKKGTGQIGPEEFRELCTGFDIQPTDSDAIFADLDHDGDGKVSLEDFAYGF 64
+L LF T D K +G++ +F LC + P++++ IFA LD D D ++ EDFA GF
Sbjct: 9 RLRALFHTFDSKSSGRLEKGQFSALCAELKVSPSEAEDIFARLDSDKDSCITFEDFAMGF 68
Query: 65 REFLNSDARRLKSNVNAGAMSS--------EGPERRNSDVQNAWSLLLAGIGEANVHKFL 116
R K +V G E PE +S + LA E N
Sbjct: 69 RGARGLHMPEGKKDVEQGEPPKSPSTPDKEEKPEETSSPAWEDFQRRLA--DEVNYI--- 123
Query: 117 NTSGKKLADLYHELRTSSNCPEIVTHFEGALSSLLDDVKRLHEDNEKLEEMFNREREVHL 176
++ + LY + P ++ +E + + + +++ + E L R ++
Sbjct: 124 -PRREQASILYQNINIVE--PLLIQQYEHVIRNFVREIRLQSTEMENLAIAVKRAQDKAA 180
Query: 177 ERLKGLEEELDVQVAKVVTQAKEEARAKYEQEKAILMRKMEHETQELQAHLNLFQKVNNV 236
+L LEEE+D ++ V + K+E + K E+ L R+ E E ELQ + +K+
Sbjct: 181 IQLSELEEEMDQRIQAVEKRVKKEEKRKSEEALNDLKRQHESEVAELQVTIKKLKKLEE- 239
Query: 237 LKEKKIEKQQDPT----SDHNFSFENEELKITLEKTKNNLDLVHAEMAQLKSEY 286
+ K I ++D H+ + EN++L+ L + + ++ + +E+ LKS+Y
Sbjct: 240 -QSKNINLKEDVAVLRRRLHDLTMENQKLRKDLLEAQTSISFLQSELDALKSDY 292
>sp|A5WW21|RASEF_DANRE Ras and EF-hand domain-containing protein OS=Danio rerio GN=rasef
PE=2 SV=1
Length = 663
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 117/168 (69%), Gaps = 2/168 (1%)
Query: 392 AFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTAGQ 451
+++V AGDA GKS F+ R S F + +TLGVDFQ+K + VD LQ+WDTAGQ
Sbjct: 467 VYRLVLAGDAGSGKSSFLLRLSLNEFRGDIQTTLGVDFQIKKMLVDGEKTNLQIWDTAGQ 526
Query: 452 ERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDLRA 511
ERFRS+ ++YFR+A GV+LLYDVT+E SF +V+ WVE + E T+ IP+ I NKVDLRA
Sbjct: 527 ERFRSIARSYFRKAHGVLLLYDVTSESSFLNVREWVEQIRESTDEDIPMCIIGNKVDLRA 586
Query: 512 DAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
A+ +G C+ GEKLA Y A+F E S+K G N+++A++ L+R V
Sbjct: 587 -ARPEG-SCVSSIHGEKLAMNYNALFCEASAKEGTNVIEAVLHLAREV 632
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 140/291 (48%), Gaps = 22/291 (7%)
Query: 1 MSDLQLEELFKTCDKKGTGQIGPEEFRELCTGFDIQPTDSDAIFADLDHDGDGKVSLEDF 60
M+ +L LF CD +G++ E+F +C ++ D +F D DGDG ++ DF
Sbjct: 1 MNHAELRRLFAACDGNQSGRVEYEDFTTVCRELNVPADDIRTLFNKFDLDGDGYINFNDF 60
Query: 61 AYGFREFLNSDARRLKSNVNAGAMSSEGPERRNSDVQNAWSLLLAGIGEANVHKFLNTSG 120
+ F+E S+A L S N +RR AW + + +V +L
Sbjct: 61 SSSFQEV--SEALNLASLGNCL-----HSQRR------AWDEFENTL-DGDVAFYLGRQW 106
Query: 121 KKLADLYHELRTSSNCPEIVTHFEGALSSLLDDVKRLHEDNEKLEEMFNREREVHLERLK 180
L++LY + ++S+ ++ FE + +L+ +++ ++E+LE R EV +L
Sbjct: 107 DALSELYEGIHSTSD-ELLLQQFEDLIRALVTEIREHRMESEQLETSLRRTEEVSSSQLA 165
Query: 181 GLEEELDVQVAKVVTQAKEEARAKYEQEKAILMRKMEHETQELQAHLNLFQKVNNVLKEK 240
+EE+L Q+ + +EE + K ++ A+L K E+E +LQ + K +E
Sbjct: 166 EMEEDLQQQLIHTERRVREEEQKKLDESIAMLQIKHENELADLQTTIERLTK--QYQEES 223
Query: 241 KIEKQQDPTSD-----HNFSFENEELKITLEKTKNNLDLVHAEMAQLKSEY 286
K+ ++ + + ENEEL+ +L K + N+ ++ E+ +LK+ +
Sbjct: 224 KLNTPREDSVKLRAQIKDLMEENEELRASLMKAQMNVSILQVELDKLKNAF 274
>sp|P70550|RAB8B_RAT Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1
Length = 207
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C ++RFS++ F ST+G+DF+++TI +D + + LQ+WDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G+ML+YD+TNE+SF+++KNW+ +EE + + +I NK D+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDM 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
Q + +E GEKLA YG F+ETS+KS N+ +A L+R +
Sbjct: 126 NDKRQ------VSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDI 169
>sp|P61028|RAB8B_MOUSE Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1
Length = 207
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C ++RFS++ F ST+G+DF+++TI +D + + LQ+WDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G+ML+YD+TNE+SF+++KNW+ +EE + + +I NK D+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDM 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
Q + +E GEKLA YG F+ETS+KS N+ +A L+R +
Sbjct: 126 NDKRQ------VSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDI 169
>sp|Q5REC9|RAB8B_PONAB Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1
Length = 207
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C ++RFS++ F ST+G+DF+++TI +D + + LQ+WDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G+ML+YD+TNE+SF+++KNW+ +EE + + +I NK D+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDM 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
Q + +E GEKLA YG F+ETS+KS N+ +A L+R +
Sbjct: 126 NDKRQ------VSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDI 169
>sp|Q92930|RAB8B_HUMAN Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2
Length = 207
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C ++RFS++ F ST+G+DF+++TI +D + + LQ+WDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G+ML+YD+TNE+SF+++KNW+ +EE + + +I NK D+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDM 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
Q + +E GEKLA YG F+ETS+KS N+ +A L+R +
Sbjct: 126 NDKRQ------VSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDI 169
>sp|P22128|RAB8_DIPOM Ras-related protein Rab-8 OS=Diplobatis ommata PE=2 SV=1
Length = 210
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C ++RFS++ F ST+G+DF+++T+ +D + + LQ+WDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G+M +YD+TNE+SF+++KNW+ +EE + + +I NK D+
Sbjct: 66 GQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDM 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
Q + +E GEKLA YG F+ETS+KS N+ +A I L+R +
Sbjct: 126 NEKRQ------VSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDI 169
>sp|Q2HJI8|RAB8B_BOVIN Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1
Length = 207
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 115/170 (67%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C ++RFS++ F ST+G+DF+++TI +D + + LQ+WDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G+ML+YD+TNE+SF+++KNW+ +EE + + +I NK D+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDM 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
Q + +E GEKLA YG F+E S+KS N+ +A L+R +
Sbjct: 126 NDKRQ------VSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDI 169
>sp|Q4R5P1|RAB8A_MACFA Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2
SV=1
Length = 207
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C ++RFS++ F + ST+G+DF+++TI +D + + LQ+WDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G+ML+YD+TNE+SF++++NW+ +EE + +I NK D+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDV 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
Q + +E GEKLA YG FMETS+K+ N+ +A L+R +
Sbjct: 126 NDKRQ------VSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI 169
>sp|P61006|RAB8A_HUMAN Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1
Length = 207
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C ++RFS++ F + ST+G+DF+++TI +D + + LQ+WDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G+ML+YD+TNE+SF++++NW+ +EE + +I NK D+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDV 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
Q + +E GEKLA YG FMETS+K+ N+ +A L+R +
Sbjct: 126 NDKRQ------VSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI 169
>sp|P61007|RAB8A_CANFA Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1
Length = 207
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C ++RFS++ F + ST+G+DF+++TI +D + + LQ+WDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G+ML+YD+TNE+SF++++NW+ +EE + +I NK D+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDV 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
Q + +E GEKLA YG FMETS+K+ N+ +A L+R +
Sbjct: 126 NDKRQ------VSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI 169
>sp|P35280|RAB8A_RAT Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2
Length = 207
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C ++RFS++ F + ST+G+DF+++TI +D + + LQ+WDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G+ML+YD+TNE+SF++++NW+ +EE + +I NK D+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDV 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
Q + +E GEKLA YG FMETS+K+ N+ +A L+R +
Sbjct: 126 NDKRQ------VSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI 169
>sp|P55258|RAB8A_MOUSE Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2
Length = 207
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C ++RFS++ F + ST+G+DF+++TI +D + + LQ+WDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G+ML+YD+TNE+SF++++NW+ +EE + +I NK D+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDV 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
Q + +E GEKLA YG FMETS+K+ N+ +A L+R +
Sbjct: 126 NDKRQ------VSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI 169
>sp|A4FV54|RAB8A_BOVIN Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1
Length = 207
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C ++RFS++ F + ST+G+DF+++TI +D + + LQ+WDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G+ML+YD+TNE+SF++++NW+ +EE + +I NK D+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDV 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
Q + +E GEKLA YG FMETS+K+ N+ +A L+R +
Sbjct: 126 NDKRQ------VSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDI 169
>sp|Q5R4A3|RAB8A_PONAB Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1
Length = 207
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C ++RFS++ F + ST+G+DF+++TI +D + + LQ+WDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G+ML+YD+TNE+SF++++NW+ +EE + +I NK D+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDV 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
Q + +E GEKLA YG FMETS+K+ N+ +A L+R +
Sbjct: 126 NDKRQ------VSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI 169
>sp|Q5F470|RAB8A_CHICK Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1
Length = 207
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 113/170 (66%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C ++RFS++ F ST+G+DF+++TI +D + + LQ+WDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G+ML+YD+TNE+SF +++NWV +EE + +I NK D
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDA 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
Q + RE GEKLA +G FMETS+K+ NI +A L+R +
Sbjct: 126 NDKRQ------VSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDI 169
>sp|Q504M8|RAB26_MOUSE Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=1 SV=1
Length = 260
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 121/187 (64%), Gaps = 8/187 (4%)
Query: 375 PLLSLSNSLEPTGE-PDRAFKIVFAGDAAVGKSCFIYRFSKEVFL-NKLGSTLGVDFQMK 432
P S+ SL TG+ D AFK++ GD+ VGK+C + RF FL ST+G+DF+ K
Sbjct: 49 PPQSIRPSLGSTGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNK 108
Query: 433 TIRVDERNVALQLWDTAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEE 492
+ VD V LQ+WDTAGQERFRS+T Y+R A ++LLYD+TN+ SF++++ W+ ++E
Sbjct: 109 VLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQE 168
Query: 493 VTENSIPIVICANKVDLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDAL 552
+ + +++ NKVD D + + RE GEKLA++YG FMETS+++G N+ A
Sbjct: 169 YAQQDVVLMLLGNKVDSTQD------RVVKREDGEKLAKEYGLPFMETSARTGLNVDLAF 222
Query: 553 IALSRHV 559
A+++ +
Sbjct: 223 TAIAKEL 229
>sp|Q29RR0|RAB26_BOVIN Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1
Length = 256
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 114/171 (66%), Gaps = 7/171 (4%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFL-NKLGSTLGVDFQMKTIRVDERNVALQLWDT 448
D AFK++ GD+ VGK+C + RF FL ST+G+DF+ K + VD V LQ+WDT
Sbjct: 61 DVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDT 120
Query: 449 AGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVD 508
AGQERFRS+T Y+R A ++LLYDVTN+ SF+S++ W+ ++E ++ + +++ NKVD
Sbjct: 121 AGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVD 180
Query: 509 LRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
AQ + VK RE EKLA+ YG FMETS+K+G N+ A A+++ +
Sbjct: 181 ---SAQERAVK---REDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKEL 225
>sp|P51156|RAB26_RAT Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2
Length = 257
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 120/187 (64%), Gaps = 8/187 (4%)
Query: 375 PLLSLSNSLEPTGE-PDRAFKIVFAGDAAVGKSCFIYRFSKEVFL-NKLGSTLGVDFQMK 432
P S SL TG+ D AFK++ GD+ VGK+C + RF FL ST+G+DF+ K
Sbjct: 46 PPQSGRPSLGGTGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNK 105
Query: 433 TIRVDERNVALQLWDTAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEE 492
+ VD V LQ+WDTAGQERFRS+T Y+R A ++LLYD+TN+ SF++++ W+ ++E
Sbjct: 106 VLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQE 165
Query: 493 VTENSIPIVICANKVDLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDAL 552
+ + +++ NKVD + + + RE GEKLA++YG FMETS+KSG N+ A
Sbjct: 166 YAQQDVVLMLLGNKVDSTQE------RVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAF 219
Query: 553 IALSRHV 559
A+++ +
Sbjct: 220 TAIAKEL 226
>sp|P16976|YPTM1_MAIZE GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2
Length = 208
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 118/174 (67%), Gaps = 6/174 (3%)
Query: 386 TGEPDRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQL 445
+ E D FK++ GD++VGKSCF+ RF+ + +++ ST+GVDF+++T+ V+ + V LQ+
Sbjct: 2 SNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQI 61
Query: 446 WDTAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICAN 505
WDTAGQERFR++T +Y+R A G++++YD+T+ SFN+VK W++ ++ +S+ ++ N
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGN 121
Query: 506 KVDLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
K DL + + +D V + AQ+ G F+ETS+K N+ +A +A+S +
Sbjct: 122 KCDLAEN------RAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAI 169
>sp|Q9ULW5|RAB26_HUMAN Ras-related protein Rab-26 OS=Homo sapiens GN=RAB26 PE=1 SV=3
Length = 256
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 113/171 (66%), Gaps = 7/171 (4%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFL-NKLGSTLGVDFQMKTIRVDERNVALQLWDT 448
D AFK++ GD+ VGK+C + RF FL ST+G+DF+ K + VD V LQ+WDT
Sbjct: 61 DVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDT 120
Query: 449 AGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVD 508
AGQERFRS+T Y+R A ++LLYDVTN+ SF++++ W+ + E ++ + +++ NKVD
Sbjct: 121 AGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVD 180
Query: 509 LRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
+ + + RE GEKLA++YG FMETS+K+G N+ A A+++ +
Sbjct: 181 SAHE------RVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 225
>sp|Q7Z6P3|RAB44_HUMAN Ras-related protein Rab-44 OS=Homo sapiens GN=RAB44 PE=3 SV=3
Length = 723
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 113/177 (63%), Gaps = 6/177 (3%)
Query: 385 PTGEPDRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQ 444
P PD F ++F GD+ VGK+ F++ + F L +T+GVDF++KT+ VD + LQ
Sbjct: 529 PQANPDYLFHVIFLGDSNVGKTSFLHLLHQNSFATGLTATVGVDFRVKTLLVDNKCFVLQ 588
Query: 445 LWDTAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICA 504
LWDTAGQER+ SMT+ R+ADGV+L+YD+T++ SF V+ W++ +++ + + I++
Sbjct: 589 LWDTAGQERYHSMTRQLLRKADGVVLMYDITSQESFAHVRYWLDCLQDAGSDGVVILLLG 648
Query: 505 NKVDLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHVYV 561
NK+D + Q + E G++LAQ+ G F E S+ G NIL+ ++ L+R + +
Sbjct: 649 NKMDCEEERQ------VSVEAGQQLAQELGVYFGECSAALGHNILEPVVNLARSLRM 699
>sp|P20790|RAB8A_DICDI Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A
PE=3 SV=1
Length = 208
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 115/170 (67%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D K++ GD+ VGKSC + RFS++ F +T+G+DF+++TI ++ + + LQ+WDTA
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTA 72
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G++L+YDVT+E+SF +++NW+ +E+ +S+ ++ NK D+
Sbjct: 73 GQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDM 132
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
K +D G+ LA +YG F+ETS+K+ N+ +A I+L++ +
Sbjct: 133 AEK------KVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDI 176
>sp|Q8CB87|RAB44_MOUSE Ras-related protein Rab-44 OS=Mus musculus GN=Rab44 PE=2 SV=1
Length = 725
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 112/177 (63%), Gaps = 6/177 (3%)
Query: 385 PTGEPDRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQ 444
P +PD + +VF GD+ VGK+ F++ + F L +T+GVDF++K + VD + ALQ
Sbjct: 530 PQADPDYLYHVVFLGDSNVGKTSFLHLLHHDAFATGLTATVGVDFRVKNLLVDNKTFALQ 589
Query: 445 LWDTAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICA 504
LWDTAGQER+ S+T+ R+A+GV+L+YDVT++ SF V+ W++ +++ + +V+
Sbjct: 590 LWDTAGQERYHSLTRQLLRKAEGVVLMYDVTSQESFTHVRYWLDCLQDAGVEGVAMVLLG 649
Query: 505 NKVDLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHVYV 561
NK+D + Q + E G +LAQ+ G F E S+ G NIL+ ++ L+R + +
Sbjct: 650 NKMDCEEERQ------VPTEAGRRLAQELGVSFGECSAALGHNILEPMMNLARSLKM 700
>sp|P20791|RAB8B_DICDI Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B
PE=2 SV=1
Length = 203
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 112/170 (65%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D K++ GD+ VGKSC + RFS F +T+G+DF+++TI ++ + + LQ+WDTA
Sbjct: 13 DFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTA 72
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G++L+YDVT+E+SF S++NW+ +E+ +S+ ++ NK D+
Sbjct: 73 GQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDM 132
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
K +D G+ LA +YG F+ETS+K+ N+ +A I L++ +
Sbjct: 133 TEK------KVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDI 176
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 113/172 (65%), Gaps = 6/172 (3%)
Query: 388 EPDRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWD 447
E D FK++ GD+ VGKSC + RF+ + +L+ ST+GVDF+++T+ D + + LQ+WD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 448 TAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKV 507
TAGQERFR++T +Y+R A G++++YDVT++ SFN+VK W+ ++ +++ ++ NK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 508 DLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
DL A+ K + E + A + G FMETS+K+ N+ A +A++ +
Sbjct: 124 DLTAN------KVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASI 169
>sp|P36861|YPTV2_VOLCA GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1
Length = 217
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 119/175 (68%), Gaps = 7/175 (4%)
Query: 387 GEPD--RAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQ 444
G PD K++ GD+ VGKSC + RF+ ++F + +T+G+DF++K + VD + V LQ
Sbjct: 6 GRPDYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQ 65
Query: 445 LWDTAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICA 504
+WDTAGQERFR++T Y+R A G++L+YD+T+E SFN+V+NW+ +E+ +++ ++
Sbjct: 66 IWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVG 125
Query: 505 NKVDLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
NK+DL A+ K V I R G+ LA ++G F ETS+K ++ +A IA+++ V
Sbjct: 126 NKLDL---AEDKRVVSIAR--GQALADEFGFRFYETSAKDNVHVEEAFIAVAKDV 175
>sp|O24466|RAE1A_ARATH Ras-related protein RABE1a OS=Arabidopsis thaliana GN=RABE1A PE=1
SV=1
Length = 216
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 111/170 (65%), Gaps = 5/170 (2%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D K++ GD+ VGKSC + RFS F +T+G+DF+++TI +D + + LQ+WDTA
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G++L+YDVT+E SFN+++NW+ +E+ +S+ ++ NK D+
Sbjct: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKADM 132
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
+A + + G+ LA +YG F ETS+K+ N+ + ++++ +
Sbjct: 133 DESKRA-----VPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDI 177
>sp|Q58DS5|RAB13_BOVIN Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1
Length = 203
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 119/172 (69%), Gaps = 6/172 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C I RF+++ F N ST+G+DF+++T+ ++ + + LQ+WDTA
Sbjct: 6 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERF+++T Y+R A G++L+YD+T+E+SF +++NW+++++E + ++ NK D+
Sbjct: 66 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDM 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHVYV 561
A + + +E +KLA+++G F ETS+KS N+ +A +L+R + +
Sbjct: 126 EAKRK------VQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILL 171
>sp|P51153|RAB13_HUMAN Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1
Length = 203
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 119/172 (69%), Gaps = 6/172 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C I RF+++ F N ST+G+DF+++T+ ++ + + LQ+WDTA
Sbjct: 6 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERF+++T Y+R A G++L+YD+T+E+SF +++NW+++++E + ++ NK D+
Sbjct: 66 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDM 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHVYV 561
A + + +E +KLA+++G F ETS+KS N+ +A +L+R + +
Sbjct: 126 EAKRK------VQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILL 171
>sp|P28188|RAD2A_ARATH Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1
SV=3
Length = 203
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 110/172 (63%), Gaps = 6/172 (3%)
Query: 388 EPDRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWD 447
E D FK++ GD+ VGKSC + RFS + ++ ST+GVDF+++T+ D + + LQ+WD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 448 TAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKV 507
TAGQERFR++T +Y+R A G++++YDVT+E SFN+VK W+ ++ +++ ++ NK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 508 DLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
DL + + I E + A + G FMETS+K N+ A +A+S +
Sbjct: 124 DLTEN------RAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASI 169
>sp|Q5KTJ6|RAB13_MESAU Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2
SV=1
Length = 203
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 119/172 (69%), Gaps = 6/172 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C I RF+++ F N ST+G+DF+++T+ ++ + + LQ+WDTA
Sbjct: 6 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERF+++T Y+R A G++L+YD+T+E+SF +++NW+++++E + ++ NK D+
Sbjct: 66 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDM 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHVYV 561
A + + +E +KLA+++G F ETS+KS N+ +A +L+R + +
Sbjct: 126 EAKRK------VLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDILL 171
>sp|Q9DD03|RAB13_MOUSE Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=1 SV=1
Length = 202
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 118/172 (68%), Gaps = 6/172 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C I RF+++ F + ST+G+DF+++T+ ++ + + LQ+WDTA
Sbjct: 6 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERF+++T Y+R A G++L+YD+T+E+SF +++NW+++++E + ++ NK D+
Sbjct: 66 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDM 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHVYV 561
A Q + RE EKLA+++ F ETS+KS N+ +A +L+R + +
Sbjct: 126 EAKRQ------VQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILL 171
>sp|Q39433|RB1BV_BETVU Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1
Length = 215
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 110/170 (64%), Gaps = 5/170 (2%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D K++ GD+ VGKSC + RFS F +T+G+DF+++TI +D + + LQ+WDTA
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G++L+YDVT+E SFN+++NW+ +E+ +++ ++ NK D+
Sbjct: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
+A + G+ LA +YG F ETS+K+ N+ + +++R +
Sbjct: 133 DESKRA-----VPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
>sp|P28186|RAE1C_ARATH Ras-related protein RABE1c OS=Arabidopsis thaliana GN=RABE1C PE=1
SV=1
Length = 216
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 109/170 (64%), Gaps = 5/170 (2%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D K++ GD+ VGKSC + RFS F +T+G+DF+++TI +D + + LQ+WDTA
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T Y+R A G++L+YDVT+E SFN+++NW+ +E+ +++ ++ NK D+
Sbjct: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
+A + G+ LA +YG F ETS+K+ N+ + ++ R +
Sbjct: 133 DESKRA-----VPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDI 177
>sp|P01123|YPT1_YEAST GTP-binding protein YPT1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT1 PE=1 SV=2
Length = 206
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 112/172 (65%), Gaps = 6/172 (3%)
Query: 388 EPDRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWD 447
E D FK++ G++ VGKSC + RFS + + N ST+GVDF++KT+ +D + V LQ+WD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 448 TAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKV 507
TAGQERFR++T +Y+R + G++++YDVT++ SFN VK W++ ++ +++ ++ NK
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKC 123
Query: 508 DLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
DL K + ++ +V ++ A F+ETS+ N+ DA + ++R +
Sbjct: 124 DL------KDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQI 169
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 110/172 (63%), Gaps = 6/172 (3%)
Query: 388 EPDRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWD 447
E D FK++ GD+ VGKSC + RF+ + +L ST+GVDF+++T+ D + + LQ+WD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 448 TAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKV 507
TAGQERFR++T +Y+R A G++++YDVT++ SFN+VK W+ ++ ++ ++ NK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 508 DLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
DL + + + E G+ LA + G F+ETS+K N+ A + ++ +
Sbjct: 124 DLAEN------RVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEI 169
>sp|P35286|RAB13_RAT Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2
Length = 203
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 118/172 (68%), Gaps = 6/172 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGK+C I RF+++ F + ST+G+DF+++T+ ++ + + LQ+WDTA
Sbjct: 6 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTA 65
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERF+++T Y+R A G++L+YD+T+E+SF +++NW+++++E + ++ NK D+
Sbjct: 66 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDM 125
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHVYV 561
A + + RE E+LA+++ F ETS+KS N+ +A +L+R + +
Sbjct: 126 EAKRK------VQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDILL 171
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 109/172 (63%), Gaps = 6/172 (3%)
Query: 388 EPDRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWD 447
E D FK++ GD+ VGKSC + RF+ + + ST+GVDF+++TI +D + + LQ+WD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 448 TAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKV 507
TAGQERFR++T +Y+R A G++++YDVT++ SFN+VK W++ ++ ++ ++ NK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 508 DLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
DL K +D ++ A G F+ETS+K+ N+ A + ++ +
Sbjct: 124 DLTTK------KVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1
Length = 205
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 109/170 (64%), Gaps = 6/170 (3%)
Query: 390 DRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWDTA 449
D FK++ GD+ VGKSC + RF+ + + ST+GVDF+++TI +D + + LQ+WDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 450 GQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKVDL 509
GQERFR++T +Y+R A G++++YDVT++ SFN+VK W++ ++ ++ ++ NK DL
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDL 128
Query: 510 RADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
K +D ++ A Q G F+ETS+K+ N+ A + ++ +
Sbjct: 129 TTK------KVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEI 172
>sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1
Length = 203
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 110/172 (63%), Gaps = 6/172 (3%)
Query: 388 EPDRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWD 447
E D FK++ GD+ VGKSC + RF+ + + ST+GVDF+++T+ +D + + LQ+WD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 448 TAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKV 507
TAGQERFR++T +Y+R A G++++YDVT++ SFN+VK W+ ++ ++ ++ NK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKS 123
Query: 508 DLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
DL G K +D + + A + G F+ETS+K+ N+ A + ++ +
Sbjct: 124 DL------TGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3
Length = 205
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 381 NSLEPTGEPDRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERN 440
+S+ P E D FK++ GD+ VGKSC + RF+ + + ST+GVDF+++TI +D +
Sbjct: 2 SSMNP--EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT 59
Query: 441 VALQLWDTAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPI 500
+ LQ+WDTAGQERFR++T +Y+R A G++++YDVT++ SFN+VK W++ ++ ++
Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK 119
Query: 501 VICANKVDLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
++ NK DL K +D ++ A G F+ETS+K+ N+ + + ++ +
Sbjct: 120 LLVGNKCDLTTK------KVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 381 NSLEPTGEPDRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERN 440
+S+ P E D FK++ GD+ VGKSC + RF+ + + ST+GVDF+++TI +D +
Sbjct: 2 SSMNP--EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT 59
Query: 441 VALQLWDTAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPI 500
+ LQ+WDTAGQERFR++T +Y+R A G++++YDVT++ SFN+VK W++ ++ ++
Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK 119
Query: 501 VICANKVDLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
++ NK DL K +D ++ A G F+ETS+K+ N+ + + ++ +
Sbjct: 120 LLVGNKCDLTTK------KVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
>sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3
Length = 205
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 381 NSLEPTGEPDRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERN 440
+S+ P E D FK++ GD+ VGKSC + RF+ + + ST+GVDF+++TI +D +
Sbjct: 2 SSMNP--EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT 59
Query: 441 VALQLWDTAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPI 500
+ LQ+WDTAGQERFR++T +Y+R A G++++YDVT++ SFN+VK W++ ++ ++
Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK 119
Query: 501 VICANKVDLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
++ NK DL K +D ++ A G F+ETS+K+ N+ + + ++ +
Sbjct: 120 LLVGNKCDLTTK------KVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
>sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3
Length = 205
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 381 NSLEPTGEPDRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERN 440
+S+ P E D FK++ GD+ VGKSC + RF+ + + ST+GVDF+++TI +D +
Sbjct: 2 SSMNP--EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT 59
Query: 441 VALQLWDTAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPI 500
+ LQ+WDTAGQERFR++T +Y+R A G++++YDVT++ SFN+VK W++ ++ ++
Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK 119
Query: 501 VICANKVDLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
++ NK DL K +D ++ A G F+ETS+K+ N+ + + ++ +
Sbjct: 120 LLVGNKCDLTTK------KVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
>sp|Q9SEH3|RAD2C_ARATH Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=1
SV=1
Length = 202
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 110/172 (63%), Gaps = 6/172 (3%)
Query: 388 EPDRAFKIVFAGDAAVGKSCFIYRFSKEVFLNKLGSTLGVDFQMKTIRVDERNVALQLWD 447
E D FK++ GD+ VGKSC + RF+ + +L+ ST+GVDF+++T+ D + + LQ+WD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 448 TAGQERFRSMTKNYFRRADGVMLLYDVTNERSFNSVKNWVEAVEEVTENSIPIVICANKV 507
TAGQERFR++T +Y+R A G+++ YDVT+ SFN+VK W+ ++ ++ ++ NK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 508 DLRADAQAKGVKCIDREVGEKLAQQYGAIFMETSSKSGDNILDALIALSRHV 559
DL + K + E + A + G F+ETS+K+ N+ +A +A++ +
Sbjct: 124 DLTSQ------KVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 214,679,167
Number of Sequences: 539616
Number of extensions: 9316702
Number of successful extensions: 49741
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 2498
Number of HSP's that attempted gapping in prelim test: 43005
Number of HSP's gapped (non-prelim): 7093
length of query: 593
length of database: 191,569,459
effective HSP length: 123
effective length of query: 470
effective length of database: 125,196,691
effective search space: 58842444770
effective search space used: 58842444770
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)