Query psy8074
Match_columns 376
No_of_seqs 218 out of 1877
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 17:43:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8074.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8074hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 100.0 6.4E-45 2.2E-49 392.5 23.1 301 12-358 261-574 (1034)
2 2zxe_A Na, K-ATPase alpha subu 100.0 1.2E-44 4.1E-49 389.9 16.1 300 12-357 256-568 (1028)
3 3ar4_A Sarcoplasmic/endoplasmi 100.0 6.5E-43 2.2E-47 376.1 11.9 309 12-356 217-572 (995)
4 1mhs_A Proton pump, plasma mem 100.0 1E-39 3.5E-44 344.8 14.1 274 1-352 230-518 (920)
5 3b8c_A ATPase 2, plasma membra 100.0 6.4E-38 2.2E-42 331.0 3.6 271 1-356 181-467 (885)
6 3rfu_A Copper efflux ATPase; a 99.9 7.8E-28 2.7E-32 249.7 11.2 225 1-286 276-513 (736)
7 3j08_A COPA, copper-exporting 99.9 4.2E-25 1.4E-29 227.2 12.6 191 1-237 183-386 (645)
8 3j09_A COPA, copper-exporting 99.9 9E-25 3.1E-29 227.6 12.6 191 1-237 261-464 (723)
9 3gwi_A Magnesium-transporting 99.7 1.5E-18 5.1E-23 148.7 -0.5 109 220-358 33-143 (170)
10 2yj3_A Copper-transporting ATP 98.2 1.2E-09 4E-14 100.0 0.0 46 124-169 5-50 (263)
11 3a1c_A Probable copper-exporti 98.4 3.8E-07 1.3E-11 84.2 6.9 85 123-237 8-92 (287)
12 3skx_A Copper-exporting P-type 97.2 0.00012 4.1E-09 66.2 2.9 38 135-172 1-38 (280)
13 3gwi_A Magnesium-transporting 95.6 0.003 1E-07 53.3 0.9 41 329-369 60-100 (170)
14 4fe3_A Cytosolic 5'-nucleotida 93.0 0.028 9.5E-07 51.4 1.4 36 128-164 16-60 (297)
15 3ixz_A Potassium-transporting 89.6 0.31 1.1E-05 52.5 5.3 75 293-370 455-532 (1034)
16 1svj_A Potassium-transporting 88.8 0.22 7.7E-06 41.0 2.7 95 154-287 13-108 (156)
17 2zxe_A Na, K-ATPase alpha subu 88.7 0.23 8E-06 53.4 3.5 74 293-369 450-526 (1028)
18 3ar4_A Sarcoplasmic/endoplasmi 84.6 0.48 1.6E-05 50.9 3.2 78 292-369 434-529 (995)
19 2hc8_A PACS, cation-transporti 73.2 0.28 9.7E-06 38.0 -2.3 21 11-31 84-104 (113)
20 2kmv_A Copper-transporting ATP 64.3 14 0.00049 30.9 6.4 16 156-171 1-16 (185)
21 1mhs_A Proton pump, plasma mem 41.0 21 0.00073 37.7 4.4 68 297-368 419-486 (920)
22 3ewi_A N-acylneuraminate cytid 31.1 18 0.00061 29.6 1.5 25 141-165 3-27 (168)
23 3mn1_A Probable YRBI family ph 26.5 44 0.0015 27.4 3.2 26 139-164 11-36 (189)
24 3b8c_A ATPase 2, plasma membra 20.8 24 0.00082 37.2 0.5 38 330-367 397-434 (885)
25 2gsm_B Cytochrome C oxidase su 20.3 3E+02 0.01 24.1 7.5 28 39-66 20-47 (262)
26 3mmz_A Putative HAD family hyd 20.1 42 0.0014 27.2 1.7 23 142-164 7-29 (176)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00 E-value=6.4e-45 Score=392.51 Aligned_cols=301 Identities=23% Similarity=0.251 Sum_probs=239.5
Q ss_pred ceeEEEEEeecCCCccccCC-CcccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeecCccchhhh
Q psy8074 12 SHLANIPVVHEEREPAAEKP-DREDDHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIEDKSWKNTY 90 (376)
Q Consensus 12 ~g~~~~~V~~~G~~t~~~~i-~~~~~~~~~~t~l~~~l~~~~~~i~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~ 90 (376)
+|.++++|++||.+|.+|+| ......+.++||+|+++++++..+..++++++++++++.++. +.
T Consensus 261 ~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------~~------ 325 (1034)
T 3ixz_A 261 EGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI---------GY------ 325 (1034)
T ss_pred eecceEEEEeehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------cc------
Confidence 46789999999999999999 888888899999999999999998877776666555433221 11
Q ss_pred hHHHHHHHHHHHhhhhhhccCchhHHHHHHHHHHHHHHHhcCceeccchHHhhhcCcceEEccCCCccCCCceEEEEEEe
Q psy8074 91 ANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYI 170 (376)
Q Consensus 91 ~~~~~~~~~~~~~llv~~iP~~L~~~vti~l~~~~~~~~~~~ilvr~~~~~E~LG~v~~i~~DKTGTLT~n~m~v~~~~~ 170 (376)
.+...+.+++++++++||||||+++++++++++++|+++|++||+++++|+||++++||||||||||+|+|+|+++++
T Consensus 326 --~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~ 403 (1034)
T 3ixz_A 326 --TFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWF 403 (1034)
T ss_pred --hHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEE
Confidence 245678889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCeeeccCCCC-------CCCChhhHHHHHHHHHhhhcccccCCCCCCCCCCccccCCccHHHHHHHHHHcCCcchhhcc
Q psy8074 171 CEVLSKTTPKF-------SSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRD 243 (376)
Q Consensus 171 ~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~al~~~a~~~g~~~~~~~~ 243 (376)
++..+...... ...++....++..+.+||++..... ....+...+...|||+|.|++.++...+.+....+.
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~-~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~ 482 (1034)
T 3ixz_A 404 DNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSG-QDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRE 482 (1034)
T ss_pred CCccccccCcccccccccCcCCHHHHHHHHHHHHhccceeccC-cCCCcccCceeccCchHHHHHHHHHHhCCChHHHHH
Confidence 87755432211 1122344566677778887653211 011111234568999999999999988777776666
Q ss_pred cCccceeeEEecccCCCcceEEEEEcC---CCcEEEEEcCCCCCCCCCCCCCCcccCCcchhhHHHHHHHcCCCcccccc
Q psy8074 244 DIPEEMLTRVYTFNSVRKSMSTVIPRQ---GGGYRLFTKGASEIPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRD 320 (376)
Q Consensus 244 ~~~~~~i~~~~pF~s~rK~msvvv~~~---~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 320 (376)
.++ .++++||||+||+|+++++.+ ++++++|+|||||.|++ +|+ .... ++...++++
T Consensus 483 ~~~---~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~-------------~c~---~~~~-~~~~~~l~~ 542 (1034)
T 3ixz_A 483 RFP---KVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLE-------------RCS---SILI-KGQELPLDE 542 (1034)
T ss_pred hCc---ceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHH-------------HhH---Hhhc-CCceecCCH
Confidence 654 478999999999999988753 36789999999999999 999 6654 555667777
Q ss_pred cchhhhhhheecC--CCCceeeeeeeeccCCeeEEEecCc
Q psy8074 321 DIPEEMLTRVYTF--NSVRKSMSTVIPRQGGGYRLFTKGA 358 (376)
Q Consensus 321 ~~~~~~~~~~~~~--~glR~~m~~~~~~l~~a~k~~~~g~ 358 (376)
+.++.+.+...++ +|+|+ |++|||.+....
T Consensus 543 ~~~~~~~~~~~~~a~~G~Rv--------La~A~~~l~~~~ 574 (1034)
T 3ixz_A 543 QWREAFQTAYLSLGGLGERV--------LGFCQLYLSEKD 574 (1034)
T ss_pred HHHHHHHHHHHHHHhcCcHh--------heEeEEecChhh
Confidence 7777777777777 99999 999999886543
No 2
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00 E-value=1.2e-44 Score=389.94 Aligned_cols=300 Identities=25% Similarity=0.293 Sum_probs=232.7
Q ss_pred ceeEEEEEeecCCCccccCC-CcccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeecCccchhhh
Q psy8074 12 SHLANIPVVHEEREPAAEKP-DREDDHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIEDKSWKNTY 90 (376)
Q Consensus 12 ~g~~~~~V~~~G~~t~~~~i-~~~~~~~~~~t~l~~~l~~~~~~i~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~ 90 (376)
+|.++++|++||.+|++|+| .+...++.+++|+|+.+++++..+..++++++++++++.+. .+.+|
T Consensus 256 ~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~---------~~~~~---- 322 (1028)
T 2zxe_A 256 EGTARGVVVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---------LGYSW---- 322 (1028)
T ss_dssp EEEEEEEEEECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------TTCCH----
T ss_pred cceEEEEEEEeccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------ccCcH----
Confidence 47899999999999999999 88888899999999999999999988877777655544211 11222
Q ss_pred hHHHHHHHHHHHhhhhhhccCchhHHHHHHHHHHHHHHHhcCceeccchHHhhhcCcceEEccCCCccCCCceEEEEEEe
Q psy8074 91 ANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYI 170 (376)
Q Consensus 91 ~~~~~~~~~~~~~llv~~iP~~L~~~vti~l~~~~~~~~~~~ilvr~~~~~E~LG~v~~i~~DKTGTLT~n~m~v~~~~~ 170 (376)
...+.+++++++++|||+||+++++++++++++|+++|++||+++++|+||++++||||||||||+|+|+|.++++
T Consensus 323 ----~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~ 398 (1028)
T 2zxe_A 323 ----LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWF 398 (1028)
T ss_dssp ----HHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEE
T ss_pred ----HHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEE
Confidence 3467778889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCeeeccCCCC-------CCCChhhHHHHHHHHHhhhcccccCCCCCCCCCCccccCCccHHHHHHHHHHcCCcchhhcc
Q psy8074 171 CEVLSKTTPKF-------SSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRD 243 (376)
Q Consensus 171 ~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~al~~~a~~~g~~~~~~~~ 243 (376)
++..+...... ...++....++..+.+||++..... ..+.+...+...|||+|.||+.++...+.+....+.
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~-~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~ 477 (1028)
T 2zxe_A 399 DNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAG-QDNVPILKRSVAGDASESALLKCIELCCGSVQGMRD 477 (1028)
T ss_dssp TTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTT-CTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHH
T ss_pred CCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCeeecC-CCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHH
Confidence 87655332111 1112334466667777887643210 000111123467999999999999987555555554
Q ss_pred cCccceeeEEecccCCCcceEEEEEcC---CCcEEEEEcCCCCCCCCCCCCCCcccCCcchhhHHHHHHHcCCCcccccc
Q psy8074 244 DIPEEMLTRVYTFNSVRKSMSTVIPRQ---GGGYRLFTKGASEIPPDEPTELPKQVGNKTECALLGFVLALGKNYQTWRD 320 (376)
Q Consensus 244 ~~~~~~i~~~~pF~s~rK~msvvv~~~---~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 320 (376)
. ++.++++||||+||||+++++.+ ++++++|+|||||.|++ +|+ ... .++...++++
T Consensus 478 ~---~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~-------------~c~---~~~-~~g~~~~l~~ 537 (1028)
T 2zxe_A 478 R---NPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILD-------------RCS---TIL-LNGAEEPLKE 537 (1028)
T ss_dssp H---SCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHT-------------TEE---EEC-BTTBCCBCCH
T ss_pred h---CceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHH-------------Hhh---hhh-cCCCcccCCH
Confidence 4 44578999999999999999864 46789999999999999 998 332 2444556666
Q ss_pred cchhhhhhheecC--CCCceeeeeeeeccCCeeEEEecC
Q psy8074 321 DIPEEMLTRVYTF--NSVRKSMSTVIPRQGGGYRLFTKG 357 (376)
Q Consensus 321 ~~~~~~~~~~~~~--~glR~~m~~~~~~l~~a~k~~~~g 357 (376)
+.++.+.+...++ +|+|+ |++|||.+...
T Consensus 538 ~~~~~~~~~~~~~a~~G~Rv--------L~~A~~~l~~~ 568 (1028)
T 2zxe_A 538 DMKEAFQNAYLELGGLGERV--------LGFCHFALPED 568 (1028)
T ss_dssp HHHHHHHHHHHHHHHTTCEE--------EEEEEEECCST
T ss_pred HHHHHHHHHHHHHHhcCCEE--------EEEEEEecCcc
Confidence 6666777667777 99999 99999998653
No 3
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=100.00 E-value=6.5e-43 Score=376.13 Aligned_cols=309 Identities=28% Similarity=0.337 Sum_probs=221.9
Q ss_pred ceeEEEEEeecCCCccccCC-CcccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeecCccchhhh
Q psy8074 12 SHLANIPVVHEEREPAAEKP-DREDDHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIEDKSWKNTY 90 (376)
Q Consensus 12 ~g~~~~~V~~~G~~t~~~~i-~~~~~~~~~~t~l~~~l~~~~~~i~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~ 90 (376)
+|.++++|++||.+|++|+| .....++.+++|+|+++++++..+..+.++++++++++....+ .....+..|
T Consensus 217 ~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---- 289 (995)
T 3ar4_A 217 AGKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF---NDPVHGGSW---- 289 (995)
T ss_dssp ECEEEEEEEECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG---GSCSSSSCH----
T ss_pred cceEEEEEEEcCcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccccchH----
Confidence 47799999999999999999 8888888999999999999999988876655544332211000 000011122
Q ss_pred hHHHHHHHHHHHhhhhhhccCchhHHHHHHHHHHHHHHHhcCceeccchHHhhhcCcceEEccCCCccCCCceEEEEEEe
Q psy8074 91 ANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYI 170 (376)
Q Consensus 91 ~~~~~~~~~~~~~llv~~iP~~L~~~vti~l~~~~~~~~~~~ilvr~~~~~E~LG~v~~i~~DKTGTLT~n~m~v~~~~~ 170 (376)
...+...|..++++++++|||+||++++++++.++++|+++|++||+++++|+||++++||||||||||+|+|+|++++.
T Consensus 290 ~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~ 369 (995)
T 3ar4_A 290 IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFI 369 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEe
Confidence 23345567788999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cCeeec----------cCCCCCC--------------CChhhHHHHHHHHHhhhcccccCCCCCCCCCCccccCCccHHH
Q psy8074 171 CEVLSK----------TTPKFSS--------------LPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECA 226 (376)
Q Consensus 171 ~~~~~~----------~~~~~~~--------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~a 226 (376)
.+..++ .....++ .++.+.+++..+.+||++.... +++...+...|||+|.|
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~----~~~~~~~~~~g~p~E~A 445 (995)
T 3ar4_A 370 IDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDF----NETKGVYEKVGEATETA 445 (995)
T ss_dssp EEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEE----ETTTTEEEEESCHHHHH
T ss_pred cCcccCcccccceeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccc----cCCCCceeecCCccHHH
Confidence 643211 0000011 1122445555667787664211 11122334569999999
Q ss_pred HHHHHHHcCC-cc--hhhc----------ccCccceeeEEecccCCCcceEEEEEcCCC-----cEEEEEcCCCCCCCCC
Q psy8074 227 LLGFVLALGK-NY--QTWR----------DDIPEEMLTRVYTFNSVRKSMSTVIPRQGG-----GYRLFTKGASEIPPDE 288 (376)
Q Consensus 227 l~~~a~~~g~-~~--~~~~----------~~~~~~~i~~~~pF~s~rK~msvvv~~~~~-----~~~l~~KGA~e~il~~ 288 (376)
|+.++.+.|. +. ..+. ....++++++++||||+||||||+++.++| ++++|+|||||.|++
T Consensus 446 l~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~- 524 (995)
T 3ar4_A 446 LTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVID- 524 (995)
T ss_dssp HHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHH-
T ss_pred HHHHHHHcCCccccccccccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHH-
Confidence 9999998776 11 1100 011236778999999999999999987655 689999999999999
Q ss_pred CCCCCcccCCcchhhHHHHHHHcCCCcccccccchhhhhhheecC----CCCceeeeeeeeccCCeeEEEec
Q psy8074 289 PTELPKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTF----NSVRKSMSTVIPRQGGGYRLFTK 356 (376)
Q Consensus 289 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~glR~~m~~~~~~l~~a~k~~~~ 356 (376)
+|+ .... ++...+++++.++.+.++..++ +|+|+ |++|||.+..
T Consensus 525 ------------~c~---~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRv--------La~A~k~~~~ 572 (995)
T 3ar4_A 525 ------------RCN---YVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRC--------LALATRDTPP 572 (995)
T ss_dssp ------------TEE---EEEE-TTEEEECCHHHHHHHHHHHHHHHHSTTCCEE--------EEEEEESSCC
T ss_pred ------------hcc---hhhc-CCCcccCCHHHHHHHHHHHHHHHhhhccceE--------EEEEEEecCc
Confidence 997 3221 2223345555555555554442 99999 9999998753
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=100.00 E-value=1e-39 Score=344.76 Aligned_cols=274 Identities=18% Similarity=0.232 Sum_probs=209.0
Q ss_pred CCCCCCCCCC------------CceeEEEEEeecCCCccccCC-CcccccccccCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy8074 1 MTGNEAPATG------------NSHLANIPVVHEEREPAAEKP-DREDDHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTV 67 (376)
Q Consensus 1 ~~~~~~~~~~------------~~g~~~~~V~~~G~~t~~~~i-~~~~~~~~~~t~l~~~l~~~~~~i~~~~~~~~~~~~ 67 (376)
+||++.|+.. .+|.++++|++||.+|++|+| .....++.+++|+|+.+++++..+..+.++++++++
T Consensus 230 LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~ 309 (920)
T 1mhs_A 230 LTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVW 309 (920)
T ss_dssp TSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4777777754 357899999999999999999 778888888999999999999877655444332221
Q ss_pred HHHHHHHhhhheeecCccchhhhhHHHHHHHHHHHhhhhhhccCchhHHHHHHHHHHHHHHHhcCceeccchHHhhhcCc
Q psy8074 68 VILVIQFCVKTFVIEDKSWKNTYANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNA 147 (376)
Q Consensus 68 i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~vti~l~~~~~~~~~~~ilvr~~~~~E~LG~v 147 (376)
+ .. +.... ++...+.+++++++++|||+||++++++++.++++|+++|+++|+++++|+||++
T Consensus 310 ~-------~~--~~~~~--------~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v 372 (920)
T 1mhs_A 310 V-------SS--FYRSN--------PIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGV 372 (920)
T ss_dssp H-------TT--TTTTC--------CHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTC
T ss_pred H-------HH--HhcCC--------cHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccC
Confidence 1 11 11111 2446788899999999999999999999999999999999999999999999999
Q ss_pred ceEEccCCCccCCCceEEEEEEecCeeeccCCCCCCCChhhHHHHHHHHHhhhcccccCCCCCCCCCCccccCCccHHHH
Q psy8074 148 TAICSDKTGTLTTNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECAL 227 (376)
Q Consensus 148 ~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~al 227 (376)
++||||||||||+|+|+|.+++..+.. ++ .+++..+..|+... .. .++|+|.|+
T Consensus 373 ~vIc~DKTGTLT~n~m~v~~~~~~~g~----------~~--~~ll~~a~l~~~~~--------~~------~~~P~e~Al 426 (920)
T 1mhs_A 373 EILCSDKTGTLTKNKLSLHDPYTVAGV----------DP--EDLMLTACLAASRK--------KK------GIDAIDKAF 426 (920)
T ss_dssp CEEEEETBTTTBSSCSCCCCCBCCSCC----------CC--THHHHHHHHSCCCS--------SC------SCCSHHHHH
T ss_pred cEEEECCCCCccccceeEEEEeecCCC----------CH--HHHHHHHHHhcCCc--------cc------CCChHHHHH
Confidence 999999999999999999987653211 00 13444444454321 00 149999999
Q ss_pred HHHHHHcCCcchhhcccCccceeeEEecccCCCcceEEEEEcCCCcEEEEEcCCCCCCCCCCCCCCcccCCcchhhHHHH
Q psy8074 228 LGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIPPDEPTELPKQVGNKTECALLGF 307 (376)
Q Consensus 228 ~~~a~~~g~~~~~~~~~~~~~~i~~~~pF~s~rK~msvvv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~c~~~~~ 307 (376)
+.++.+.+... .....+++++.+||||++|+|+++++.++|+.++|+|||||.|++ +|+
T Consensus 427 ~~~~~~~~~~~----~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~-------------~c~---- 485 (920)
T 1mhs_A 427 LKSLKYYPRAK----SVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLK-------------TVE---- 485 (920)
T ss_dssp HHHHHHSSSCC----GGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHH-------------HCC----
T ss_pred HHHHHhcccch----hhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHH-------------hcc----
Confidence 99988765321 112335678899999999999999987677888999999999999 997
Q ss_pred HHHcCCCcccccccchhhhhhheecC--CCCceeeeeeeeccCCeeE
Q psy8074 308 VLALGKNYQTWRDDIPEEMLTRVYTF--NSVRKSMSTVIPRQGGGYR 352 (376)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~glR~~m~~~~~~l~~a~k 352 (376)
. ..+++++.++.+.+...++ +|+|+ |++|||
T Consensus 486 ----~--~~~~~~~~~~~~~~~~~~~a~~G~Rv--------L~vA~~ 518 (920)
T 1mhs_A 486 ----E--DHPIPEEVDQAYKNKVAEFATRGFRS--------LGVARK 518 (920)
T ss_dssp ----C--SSCCCHHHHHHHHHHHHHHHTSSCCC--------CEECCC
T ss_pred ----c--cCCCCHHHHHHHHHHHHHHHhCCCEE--------EEEEEe
Confidence 1 1234444455566666666 99999 999987
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=100.00 E-value=6.4e-38 Score=331.04 Aligned_cols=271 Identities=17% Similarity=0.256 Sum_probs=196.1
Q ss_pred CCCCCCCCCCC------------ceeEEEEEeecCCCccccCC-CcccccccccCchHHHHHHHHHHHHH-HHHHHHHHH
Q psy8074 1 MTGNEAPATGN------------SHLANIPVVHEEREPAAEKP-DREDDHKKEKSVLQAKLTKLAIQIGY-AGSTIAVLT 66 (376)
Q Consensus 1 ~~~~~~~~~~~------------~g~~~~~V~~~G~~t~~~~i-~~~~~~~~~~t~l~~~l~~~~~~i~~-~~~~~~~~~ 66 (376)
+||++.|+... +|.++++|++||.+|+.|+| ..... ..+++|+|+.+++++.++.. +.+.+++++
T Consensus 181 LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~ 259 (885)
T 3b8c_A 181 LTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIEI 259 (885)
T ss_dssp TTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHHHHHHHHHHHHS
T ss_pred cCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47888777653 47799999999999999999 55554 67889999999999876322 111111110
Q ss_pred HHHHHHHHhhhheeecCccchhhhhHHHHHHHHHHHhhhhhhccCchhHHHHHHHHHHHHHHHhcCceeccchHHhhhcC
Q psy8074 67 VVILVIQFCVKTFVIEDKSWKNTYANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGN 146 (376)
Q Consensus 67 ~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~vti~l~~~~~~~~~~~ilvr~~~~~E~LG~ 146 (376)
+. .++....+|. ..+..++++++++|||+||+++++++++++++|+++|+++|+++++|+||+
T Consensus 260 -------~~--~~~~~~~~~~--------~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~ 322 (885)
T 3b8c_A 260 -------IV--MYPIQRRKYR--------DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 322 (885)
T ss_dssp -------TT--TTTTTCSCST--------THHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTT
T ss_pred -------HH--HHHHccCcHH--------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhC
Confidence 11 1111222332 357788999999999999999999999999999999999999999999999
Q ss_pred cceEEccCCCccCCCceEEEEEEecCeeeccCCCCCCCChhhHHHHHHHHHhhhcccccCCCCCCCCCCccccCCccHHH
Q psy8074 147 ATAICSDKTGTLTTNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECA 226 (376)
Q Consensus 147 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~a 226 (376)
+++||||||||||+|+|+|.+.++. .+. . ..+..+++..+.+|+... .++|+|.|
T Consensus 323 v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~-----~--~~~~~~ll~~aa~~~~~~----------------~~~p~~~A 377 (885)
T 3b8c_A 323 MDVLCSDKTGTLTLNKLSVDKNLVE--VFC-----K--GVEKDQVLLFAAMASRVE----------------NQDAIDAA 377 (885)
T ss_dssp CCCCEEECCCCCSCCCCCCCSCCCC--SSC-----S--STTHHHHHHHHHHHCCSS----------------SCCSHHHH
T ss_pred CCEEEECCCCCcccCceEEEEEEEe--ccC-----C--CCCHHHHHHHHHHHhCCC----------------CCCchHHH
Confidence 9999999999999999999743311 010 0 011234555555565421 26899999
Q ss_pred HHHHHHHcCCcchhhcccCccceeeEEecccCCCcceEEEEEcCCCcEEEEEcCCCCCCCCCCCCCCcccCCcchhhHHH
Q psy8074 227 LLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIPPDEPTELPKQVGNKTECALLG 306 (376)
Q Consensus 227 l~~~a~~~g~~~~~~~~~~~~~~i~~~~pF~s~rK~msvvv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~c~~~~ 306 (376)
++.++.+ ....+. .++.++.+||+|+||||+++++..+|++++|+|||||.+++ +|+
T Consensus 378 l~~~~~~----~~~~~~---~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~-------------~c~--- 434 (885)
T 3b8c_A 378 MVGMLAD----PKEARA---GIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILE-------------LAK--- 434 (885)
T ss_dssp HHHTTCC----TTCCCC---SSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSS-------------SSC---
T ss_pred HHHHhhc----hhhHhh---cCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHH-------------hcc---
Confidence 9987642 111222 24457889999999999999886677788999999999999 997
Q ss_pred HHHHcCCCcccccccchhhhhhheecC--CCCceeeeeeeeccCCeeEEEec
Q psy8074 307 FVLALGKNYQTWRDDIPEEMLTRVYTF--NSVRKSMSTVIPRQGGGYRLFTK 356 (376)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~glR~~m~~~~~~l~~a~k~~~~ 356 (376)
. +++.++.+.+...++ +|+|+ |++||+.++.
T Consensus 435 ----~-------~~~~~~~~~~~~~~~a~~G~rv--------l~vA~~~~~~ 467 (885)
T 3b8c_A 435 ----A-------SNDLSKKVLSIIDKYAERGLRS--------LAVARQVVPE 467 (885)
T ss_dssp ----C-------CSTTTTTHHHHHHHHTTTTCEE--------EEECCBCCCS
T ss_pred ----C-------chhhHHHHHHHHHHHHhCCCeE--------EEEEEecccc
Confidence 1 122233444445555 99999 9999987654
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=99.94 E-value=7.8e-28 Score=249.70 Aligned_cols=225 Identities=20% Similarity=0.215 Sum_probs=169.8
Q ss_pred CCCCCCCCCCC------------ceeEEEEEeecCCCccccCC-CcccccccccCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy8074 1 MTGNEAPATGN------------SHLANIPVVHEEREPAAEKP-DREDDHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTV 67 (376)
Q Consensus 1 ~~~~~~~~~~~------------~g~~~~~V~~~G~~t~~~~i-~~~~~~~~~~t~l~~~l~~~~~~i~~~~~~~~~~~~ 67 (376)
+||+.-|+... +|.++++|+++|.+|+.++| ....+++.+++|+|+.+++++.++.++.++++++++
T Consensus 276 LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~ 355 (736)
T 3rfu_A 276 VTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSF 355 (736)
T ss_dssp STTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47777776653 47789999999999999999 888999999999999999999999988888877766
Q ss_pred HHHHHHHhhhheeecCccchhhhhHHHHHHHHHHHhhhhhhccCchhHHHHHHHHHHHHHHHhcCceeccchHHhhhcCc
Q psy8074 68 VILVIQFCVKTFVIEDKSWKNTYANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNA 147 (376)
Q Consensus 68 i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~vti~l~~~~~~~~~~~ilvr~~~~~E~LG~v 147 (376)
+++.++. ....| ...+..++++++++|||+|++++++++..+..+++++|+++|+++++|+||++
T Consensus 356 ~~w~~~~-------~~~~~--------~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v 420 (736)
T 3rfu_A 356 IVWALLG-------PQPAL--------SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKV 420 (736)
T ss_dssp HHHHHHC-------SSSST--------THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSC
T ss_pred HHHHHhC-------CCchH--------HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCC
Confidence 5443221 11112 35688899999999999999999999999999999999999999999999999
Q ss_pred ceEEccCCCccCCCceEEEEEEecCeeeccCCCCCCCChhhHHHHHHHHHhhhcccccCCCCCCCCCCccccCCccHHHH
Q psy8074 148 TAICSDKTGTLTTNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECAL 227 (376)
Q Consensus 148 ~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~al 227 (376)
++||||||||||+|+|.|.+++..+. + ..+.+..+..+.. ...+|.+.|+
T Consensus 421 ~~i~fDKTGTLT~g~~~v~~i~~~~~-----------~--~~~~l~~aa~le~-----------------~s~hPla~Ai 470 (736)
T 3rfu_A 421 NTLVVDKTGTLTEGHPKLTRIVTDDF-----------V--EDNALALAAALEH-----------------QSEHPLANAI 470 (736)
T ss_dssp CEEEECCBTTTBCSSCEEEEEEESSS-----------C--HHHHHHHHHHHHH-----------------SSCCHHHHHH
T ss_pred CEEEEeCCCCCcCCceEEEEEEecCC-----------C--HHHHHHHHHHHhh-----------------cCCChHHHHH
Confidence 99999999999999999999883321 1 1233333322221 1257999999
Q ss_pred HHHHHHcCCcchhhcccCccceeeEEecccCCCcceEEEEEcCCCcEEEEEcCCCCCCC
Q psy8074 228 LGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIPP 286 (376)
Q Consensus 228 ~~~a~~~g~~~~~~~~~~~~~~i~~~~pF~s~rK~msvvv~~~~~~~~l~~KGA~e~il 286 (376)
++++...|.... ...+|++.+++.. .... +++. +.+|+++.+.
T Consensus 471 v~~a~~~~~~~~------------~~~~f~~~~g~gv-~~~~-~g~~--~~~G~~~~~~ 513 (736)
T 3rfu_A 471 VHAAKEKGLSLG------------SVEAFEAPTGKGV-VGQV-DGHH--VAIGNARLMQ 513 (736)
T ss_dssp HHHHHTTCCCCC------------CCSCCCCCTTTEE-EECS-SSSC--EEEESHHHHH
T ss_pred HHHHHhcCCCcc------------CcccccccCCceE-EEEE-CCEE--EEEcCHHHHH
Confidence 999986654321 2346888777643 3232 3322 3457765443
No 7
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=99.92 E-value=4.2e-25 Score=227.19 Aligned_cols=191 Identities=21% Similarity=0.196 Sum_probs=150.1
Q ss_pred CCCCCCCCCC------------CceeEEEEEeecCCCccccCC-CcccccccccCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy8074 1 MTGNEAPATG------------NSHLANIPVVHEEREPAAEKP-DREDDHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTV 67 (376)
Q Consensus 1 ~~~~~~~~~~------------~~g~~~~~V~~~G~~t~~~~i-~~~~~~~~~~t~l~~~l~~~~~~i~~~~~~~~~~~~ 67 (376)
+||++.|+.. .+|.++++|+++|.+|+.++| ....+++.+++|+|+.+++++.++..+.++++++++
T Consensus 183 LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~ 262 (645)
T 3j08_A 183 ISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAF 262 (645)
T ss_dssp HHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3677766544 357899999999999999999 888899999999999999999988777666555443
Q ss_pred HHHHHHHhhhheeecCccchhhhhHHHHHHHHHHHhhhhhhccCchhHHHHHHHHHHHHHHHhcCceeccchHHhhhcCc
Q psy8074 68 VILVIQFCVKTFVIEDKSWKNTYANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNA 147 (376)
Q Consensus 68 i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~vti~l~~~~~~~~~~~ilvr~~~~~E~LG~v 147 (376)
+. |+ . ..+.+|. ..+..++++++++|||+|++++++++..++.+++++|+++|+++++|+||++
T Consensus 263 ~~---~~----~-~~~~~~~--------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v 326 (645)
T 3j08_A 263 IY---WY----F-IAHAPLL--------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKV 326 (645)
T ss_dssp HC---SS----C-CCSCSCC--------CTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGC
T ss_pred HH---HH----H-hcCCcHH--------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCC
Confidence 32 11 1 1122222 2466688999999999999999999999999999999999999999999999
Q ss_pred ceEEccCCCccCCCceEEEEEEecCeeeccCCCCCCCChhhHHHHHHHHHhhhcccccCCCCCCCCCCccccCCccHHHH
Q psy8074 148 TAICSDKTGTLTTNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECAL 227 (376)
Q Consensus 148 ~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~al 227 (376)
+++|||||||||+|+|+|.+++..+. +..+++..+..+... ..+|.+.|+
T Consensus 327 ~~i~fDKTGTLT~~~~~v~~~~~~~~-------------~~~~~l~~aa~~e~~-----------------s~hPla~Ai 376 (645)
T 3j08_A 327 TAVIFDKTGTLTKGKPEVTDLVPLNG-------------DERELLRLAAIAERR-----------------SEHPIAEAI 376 (645)
T ss_dssp CEEEEEGGGTSSSSCCEEEEEEESSS-------------CHHHHHHHHHHHHTT-----------------CCSHHHHHH
T ss_pred CEEEEcCcccccCCCeEEEEEEeCCC-------------CHHHHHHHHHHHhhc-----------------CCChhHHHH
Confidence 99999999999999999999987531 112344433333211 257999999
Q ss_pred HHHHHHcCCc
Q psy8074 228 LGFVLALGKN 237 (376)
Q Consensus 228 ~~~a~~~g~~ 237 (376)
++++...|..
T Consensus 377 v~~a~~~g~~ 386 (645)
T 3j08_A 377 VKKALEHGIE 386 (645)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHhcCCC
Confidence 9999887654
No 8
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=99.91 E-value=9e-25 Score=227.59 Aligned_cols=191 Identities=21% Similarity=0.194 Sum_probs=150.5
Q ss_pred CCCCCCCCCC------------CceeEEEEEeecCCCccccCC-CcccccccccCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy8074 1 MTGNEAPATG------------NSHLANIPVVHEEREPAAEKP-DREDDHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTV 67 (376)
Q Consensus 1 ~~~~~~~~~~------------~~g~~~~~V~~~G~~t~~~~i-~~~~~~~~~~t~l~~~l~~~~~~i~~~~~~~~~~~~ 67 (376)
+||++.|+.. .+|.++++|+++|.+|.+++| ....+++.+++|+|+.+++++.++..+.++++++++
T Consensus 261 LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~ 340 (723)
T 3j09_A 261 ISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAF 340 (723)
T ss_dssp HHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3677766543 357899999999999999999 888899999999999999999988777666555443
Q ss_pred HHHHHHHhhhheeecCccchhhhhHHHHHHHHHHHhhhhhhccCchhHHHHHHHHHHHHHHHhcCceeccchHHhhhcCc
Q psy8074 68 VILVIQFCVKTFVIEDKSWKNTYANEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNA 147 (376)
Q Consensus 68 i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~vti~l~~~~~~~~~~~ilvr~~~~~E~LG~v 147 (376)
+++ + +..+.+| ...+..++++++++|||+|++++++++..++.+++++|+++|+++++|+||++
T Consensus 341 ~~~---~-----~~~~~~~--------~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v 404 (723)
T 3j09_A 341 IYW---Y-----FIAHAPL--------LFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKV 404 (723)
T ss_dssp TTS---C-----SSTTCTT--------CCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGC
T ss_pred HHH---H-----HhcCCcH--------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcC
Confidence 321 1 0111222 23577889999999999999999999999999999999999999999999999
Q ss_pred ceEEccCCCccCCCceEEEEEEecCeeeccCCCCCCCChhhHHHHHHHHHhhhcccccCCCCCCCCCCccccCCccHHHH
Q psy8074 148 TAICSDKTGTLTTNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECAL 227 (376)
Q Consensus 148 ~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~al 227 (376)
+++|||||||||+|+|+|.+++..+. ...+++..+..+... ..+|.+.|+
T Consensus 405 ~~i~fDKTGTLT~g~~~v~~~~~~~~-------------~~~~~l~~aa~~e~~-----------------s~hP~~~Ai 454 (723)
T 3j09_A 405 TAVIFDKTGTLTKGKPEVTDLVPLNG-------------DERELLRLAAIAERR-----------------SEHPIAEAI 454 (723)
T ss_dssp CEEEEEHHHHTSCSCCEEEEEEESSS-------------CHHHHHHHHHHHHTT-----------------CCSHHHHHH
T ss_pred CEEEEcCCCccccCceEEEEEEeCCC-------------CHHHHHHHHHHHhcc-----------------CCCchhHHH
Confidence 99999999999999999999987531 112344333333211 257999999
Q ss_pred HHHHHHcCCc
Q psy8074 228 LGFVLALGKN 237 (376)
Q Consensus 228 ~~~a~~~g~~ 237 (376)
++++...|..
T Consensus 455 ~~~a~~~~~~ 464 (723)
T 3j09_A 455 VKKALEHGIE 464 (723)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHhcCCC
Confidence 9999887654
No 9
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=99.69 E-value=1.5e-18 Score=148.75 Aligned_cols=109 Identities=16% Similarity=0.091 Sum_probs=88.3
Q ss_pred CCccHHHHHHHHHHcCCcchhhcccCccceeeEEecccCCCcceEEEEEcCCCcEEEEEcCCCCCCCCCCCCCCcccCCc
Q psy8074 220 GNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIPPDEPTELPKQVGNK 299 (376)
Q Consensus 220 g~~~e~al~~~a~~~g~~~~~~~~~~~~~~i~~~~pF~s~rK~msvvv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~ 299 (376)
+||+|.|++.++...+ ....+.. ++.++++||||+|||||++++.+++++++|+|||||+|++
T Consensus 33 ~n~~d~Ail~~~~~~~--~~~~~~~---~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~------------ 95 (170)
T 3gwi_A 33 KNLLDTAVLEGTDEES--ARSLASR---WQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILN------------ 95 (170)
T ss_dssp CCHHHHHHHHTSCHHH--HHHHHHH---SEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHT------------
T ss_pred CChHHHHHHHHHHhcC--hhhhhhc---CeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHH------------
Confidence 6999999999875432 2223333 4568999999999999999987777889999999999999
Q ss_pred chhhHHHHHHHcCCCcccccccchhhhhhheecC--CCCceeeeeeeeccCCeeEEEecCc
Q psy8074 300 TECALLGFVLALGKNYQTWRDDIPEEMLTRVYTF--NSVRKSMSTVIPRQGGGYRLFTKGA 358 (376)
Q Consensus 300 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~glR~~m~~~~~~l~~a~k~~~~g~ 358 (376)
.|+ .+. .++...+++++.++.+.+.+.++ +|+|| |++|||.++...
T Consensus 96 -~C~---~~~-~~g~~~~l~~~~~~~i~~~~~~la~~GlRv--------LavA~k~~~~~~ 143 (170)
T 3gwi_A 96 -VCS---QVR-HNGEIVPLDDIMLRKIKRVTDTLNRQGLRV--------VAVATKYLPARE 143 (170)
T ss_dssp -TEE---EEE-ETTEEEECCHHHHHHHHHHHHHHHHTTCEE--------EEEEEEEEECCS
T ss_pred -HhH---HHh-cCCCcccCCHHHHHHHHHHHHHHHhCCCEE--------EEEEEEECCCCc
Confidence 998 443 35566778887788888888888 99999 999999998654
No 10
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=98.20 E-value=1.2e-09 Score=100.02 Aligned_cols=46 Identities=26% Similarity=0.327 Sum_probs=43.3
Q ss_pred HHHHHHhcCceeccchHHhhhcCcceEEccCCCccCCCceEEEEEE
Q psy8074 124 SVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSY 169 (376)
Q Consensus 124 ~~~~~~~~~ilvr~~~~~E~LG~v~~i~~DKTGTLT~n~m~v~~~~ 169 (376)
++.+++++|+++|+.+++|.|+++++||||||||||+|++.|.++.
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~ 50 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI 50 (263)
Confidence 5678899999999999999999999999999999999999999874
No 11
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=98.39 E-value=3.8e-07 Score=84.15 Aligned_cols=85 Identities=25% Similarity=0.187 Sum_probs=59.9
Q ss_pred HHHHHHHhcCceeccchHHhhhcCcceEEccCCCccCCCceEEEEEEecCeeeccCCCCCCCChhhHHHHHHHHHhhhcc
Q psy8074 123 YSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAISINSAY 202 (376)
Q Consensus 123 ~~~~~~~~~~ilvr~~~~~E~LG~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 202 (376)
-+.++++++|+++|+++++|+++.+++|+||||||||.+.+.+.+++..+. + ..+++..+.. ..
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~-----------~--~~~~l~~~~~---~e 71 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-----------D--ERELLRLAAI---AE 71 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS-----------C--HHHHHHHHHH---HT
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC-----------C--HHHHHHHHHH---Hh
Confidence 367889999999999999999999999999999999999999998876542 1 1233322211 10
Q ss_pred cccCCCCCCCCCCccccCCccHHHHHHHHHHcCCc
Q psy8074 203 TSRIMPPDEPTELPKQVGNKTECALLGFVLALGKN 237 (376)
Q Consensus 203 ~~~~~~~~~~~~~~~~~g~~~e~al~~~a~~~g~~ 237 (376)
.....|.+.|+..++...|..
T Consensus 72 --------------~~s~hp~~~a~~~~~~~~g~~ 92 (287)
T 3a1c_A 72 --------------RRSEHPIAEAIVKKALEHGIE 92 (287)
T ss_dssp --------------TTCCSHHHHHHHHHHHHTTCC
T ss_pred --------------hcCCCHHHHHHHHHHHhcCCC
Confidence 012578899999988887754
No 12
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=97.24 E-value=0.00012 Score=66.15 Aligned_cols=38 Identities=34% Similarity=0.350 Sum_probs=31.9
Q ss_pred eccchHHhhhcCcceEEccCCCccCCCceEEEEEEecC
Q psy8074 135 VRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICE 172 (376)
Q Consensus 135 vr~~~~~E~LG~v~~i~~DKTGTLT~n~m~v~~~~~~~ 172 (376)
+|+++++|.++.++.|+||++||||.|+|.|.++...+
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~ 38 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFN 38 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESS
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecC
Confidence 58899999999999999999999999999999987654
No 13
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=95.57 E-value=0.003 Score=53.31 Aligned_cols=41 Identities=24% Similarity=0.338 Sum_probs=33.9
Q ss_pred heecCCCCceeeeeeeeccCCeeEEEecCchHHHHhccccc
Q psy8074 329 RVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIVLKNYGNI 369 (376)
Q Consensus 329 ~~~~~~glR~~m~~~~~~l~~a~k~~~~g~~~~~l~~~~~~ 369 (376)
...+|+..|.|||++++.-.-.+..++|||||.++++|+.+
T Consensus 60 ~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~ 100 (170)
T 3gwi_A 60 DEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQV 100 (170)
T ss_dssp EEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEE
T ss_pred eeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHH
Confidence 34677999999999997423467889999999999999864
No 14
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=93.03 E-value=0.028 Score=51.41 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=27.3
Q ss_pred HHhcCceeccchHHhhh---------cCcceEEccCCCccCCCceE
Q psy8074 128 MMKDNNLVRHLDACETM---------GNATAICSDKTGTLTTNRMT 164 (376)
Q Consensus 128 ~~~~~ilvr~~~~~E~L---------G~v~~i~~DKTGTLT~n~m~ 164 (376)
+.+.++++|++..+|.+ .++. +++|||||||+....
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~~ 60 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSYN 60 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEET
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeeccC
Confidence 46788999999999874 2333 567999999986543
No 15
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=89.60 E-value=0.31 Score=52.55 Aligned_cols=75 Identities=28% Similarity=0.286 Sum_probs=51.9
Q ss_pred CcccCCcchhhHHHHHHHcCCCcccccccchhhhhhheecCCCCceeeeeeeeccC---CeeEEEecCchHHHHhccccc
Q psy8074 293 PKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQG---GGYRLFTKGASEIVLKNYGNI 369 (376)
Q Consensus 293 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~glR~~m~~~~~~l~---~a~k~~~~g~~~~~l~~~~~~ 369 (376)
+...|||++++++.+....+.+.....+..+ .....+|++.|.+|+++++.-. -.+..+.||++|.++++|..+
T Consensus 455 ~~~~gdp~e~All~~~~~~~~~~~~~~~~~~---~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~ 531 (1034)
T 3ixz_A 455 RIVIGDASETALLKFSELTLGNAMGYRERFP---KVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSI 531 (1034)
T ss_pred ceeccCchHHHHHHHHHHhCCChHHHHHhCc---ceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHh
Confidence 5668999999988887664443332222211 2234567999999988886312 357789999999999999864
Q ss_pred c
Q psy8074 370 C 370 (376)
Q Consensus 370 ~ 370 (376)
.
T Consensus 532 ~ 532 (1034)
T 3ixz_A 532 L 532 (1034)
T ss_pred h
Confidence 3
No 16
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=88.80 E-value=0.22 Score=40.99 Aligned_cols=95 Identities=9% Similarity=0.023 Sum_probs=52.2
Q ss_pred CCCccCCCceEEEEEEecCeeeccCCCCCCCChhhHHHHHHHHHhhhcccccCCCCCCCCCCccccCCccHHHHHHHHHH
Q psy8074 154 KTGTLTTNRMTVVQSYICEVLSKTTPKFSSLPSNVGNLIVQAISINSAYTSRIMPPDEPTELPKQVGNKTECALLGFVLA 233 (376)
Q Consensus 154 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~al~~~a~~ 233 (376)
..||+|-|+..+..+...+.. +..+++..+.++... ...|...|++.+|+.
T Consensus 13 ~~~tit~gnr~vt~v~~~~g~------------~e~elL~lAAs~E~~-----------------SeHPla~AIv~~A~~ 63 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQGV------------DEKTLADAAQLASLA-----------------DETPEGRSIVILAKQ 63 (156)
T ss_dssp --------CEEEEEEEECTTS------------CHHHHHHHHHHTTSS-----------------CCSHHHHHHHHHHHH
T ss_pred CCCceecCCCeEEEEEecCCC------------CHHHHHHHHHHHhCc-----------------CCCHHHHHHHHHHHH
Confidence 469999999999998753211 122455444333211 146999999999987
Q ss_pred c-CCcchhhcccCccceeeEEecccCCCcceEEEEEcCCCcEEEEEcCCCCCCCC
Q psy8074 234 L-GKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIPPD 287 (376)
Q Consensus 234 ~-g~~~~~~~~~~~~~~i~~~~pF~s~rK~msvvv~~~~~~~~l~~KGA~e~il~ 287 (376)
. +......... . ....||++..++..+.+ +| .-+.+|+++.|.+
T Consensus 64 ~~~l~~~~~~~~--~---~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~~~i~~ 108 (156)
T 1svj_A 64 RFNLRERDVQSL--H---ATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIRR 108 (156)
T ss_dssp HTTCCCCCHHHH--T---CEEEEEETTTTEEEEEE---TT--EEEEEEEHHHHHH
T ss_pred hcCCCccccccc--c---cceeeccccCCCCeEEE---CC--EEEEEeCcHHHHH
Confidence 5 5433221000 0 13468999988777744 44 3467899877766
No 17
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=88.70 E-value=0.23 Score=53.45 Aligned_cols=74 Identities=28% Similarity=0.320 Sum_probs=50.3
Q ss_pred CcccCCcchhhHHHHHHHcCCCcccccccchhhhhhheecCCCCceeeeeeeecc---CCeeEEEecCchHHHHhccccc
Q psy8074 293 PKQVGNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQ---GGGYRLFTKGASEIVLKNYGNI 369 (376)
Q Consensus 293 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~glR~~m~~~~~~l---~~a~k~~~~g~~~~~l~~~~~~ 369 (376)
+...|||++++++.++...+++.....+..+ .....+|++.|.||+++++.- .-.+..+.||++|.++++|...
T Consensus 450 ~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~---~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~ 526 (1028)
T 2zxe_A 450 RSVAGDASESALLKCIELCCGSVQGMRDRNP---KIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTI 526 (1028)
T ss_dssp SCEESCHHHHHHHHHHHHHHSCHHHHHHHSC---EEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEE
T ss_pred ceeCCCchHHHHHHHHHHhCCCHHHHHHhCc---eEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhh
Confidence 4568999999988887654332211111100 123457799999999999842 2356789999999999999864
No 18
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=84.62 E-value=0.48 Score=50.89 Aligned_cols=78 Identities=29% Similarity=0.354 Sum_probs=49.7
Q ss_pred CCcccCCcchhhHHHHHHHcCC-Cc--cccccc---------chhhh-hhheecCCCCceeeeeeeeccCC-----eeEE
Q psy8074 292 LPKQVGNKTECALLGFVLALGK-NY--QTWRDD---------IPEEM-LTRVYTFNSVRKSMSTVIPRQGG-----GYRL 353 (376)
Q Consensus 292 ~~~~~~~~~~c~~~~~~~~~~~-~~--~~~~~~---------~~~~~-~~~~~~~~glR~~m~~~~~~l~~-----a~k~ 353 (376)
.++..|||++++++.++.+.+. +. ..+... .++.+ ..+..+|+..|.|||++++.-.- .++.
T Consensus 434 ~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~ 513 (995)
T 3ar4_A 434 VYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKM 513 (995)
T ss_dssp EEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEE
T ss_pred ceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEE
Confidence 3566799999998877765433 10 110000 01111 11234669999999999974222 3788
Q ss_pred EecCchHHHHhccccc
Q psy8074 354 FTKGASEIVLKNYGNI 369 (376)
Q Consensus 354 ~~~g~~~~~l~~~~~~ 369 (376)
+.||++|.++++|...
T Consensus 514 ~~KGa~e~il~~c~~~ 529 (995)
T 3ar4_A 514 FVKGAPEGVIDRCNYV 529 (995)
T ss_dssp EEEECHHHHHHTEEEE
T ss_pred EEcCCHHHHHHhcchh
Confidence 9999999999999754
No 19
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=73.20 E-value=0.28 Score=38.00 Aligned_cols=21 Identities=14% Similarity=0.091 Sum_probs=18.9
Q ss_pred CceeEEEEEeecCCCccccCC
Q psy8074 11 NSHLANIPVVHEEREPAAEKP 31 (376)
Q Consensus 11 ~~g~~~~~V~~~G~~t~~~~i 31 (376)
.+|.++++|+++|.+|++++|
T Consensus 84 ~~G~~~~~V~~~g~~T~~~~i 104 (113)
T 2hc8_A 84 NTGVLKIRATRVGGETLLAQI 104 (113)
T ss_dssp CSSCEEEEEEECGGGSHHHHH
T ss_pred eeceEEEEEEEecCcCHHHHH
Confidence 457899999999999999987
No 20
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=64.32 E-value=14 Score=30.87 Aligned_cols=16 Identities=13% Similarity=-0.077 Sum_probs=14.2
Q ss_pred CccCCCceEEEEEEec
Q psy8074 156 GTLTTNRMTVVQSYIC 171 (376)
Q Consensus 156 GTLT~n~m~v~~~~~~ 171 (376)
||||+|++.|..+...
T Consensus 1 GTLT~G~p~V~~v~~~ 16 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVL 16 (185)
T ss_dssp CCCCSCCCEEEEEEEC
T ss_pred CCCcCCcEEEEEEEec
Confidence 8999999999988753
No 21
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=41.02 E-value=21 Score=37.70 Aligned_cols=68 Identities=19% Similarity=0.192 Sum_probs=42.0
Q ss_pred CCcchhhHHHHHHHcCCCcccccccchhhhhhheecCCCCceeeeeeeeccCCeeEEEecCchHHHHhcccc
Q psy8074 297 GNKTECALLGFVLALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIVLKNYGN 368 (376)
Q Consensus 297 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~glR~~m~~~~~~l~~a~k~~~~g~~~~~l~~~~~ 368 (376)
|+|++.+++.++...+.. ....+.. -..+..+|+..|.+|+++++.-.-.+..+.||+++.++++|.+
T Consensus 419 ~~P~e~Al~~~~~~~~~~-~~~~~~~---~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~ 486 (920)
T 1mhs_A 419 IDAIDKAFLKSLKYYPRA-KSVLSKY---KVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEE 486 (920)
T ss_dssp CCSHHHHHHHHHHHSSSC-CGGGSCC---CEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCC
T ss_pred CChHHHHHHHHHHhcccc-hhhcccc---ceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccc
Confidence 489998877766542211 0000000 0223456677789999998732334556899999999998864
No 22
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=31.14 E-value=18 Score=29.59 Aligned_cols=25 Identities=20% Similarity=0.304 Sum_probs=18.5
Q ss_pred HhhhcCcceEEccCCCccCCCceEE
Q psy8074 141 CETMGNATAICSDKTGTLTTNRMTV 165 (376)
Q Consensus 141 ~E~LG~v~~i~~DKTGTLT~n~m~v 165 (376)
-|.+..+..|++|--||||.+.+.+
T Consensus 3 ~~~~~~ikliv~D~DGtL~d~~~~~ 27 (168)
T 3ewi_A 3 KEKLKEIKLLVCNIDGCLTNGHIYV 27 (168)
T ss_dssp ----CCCCEEEEECCCCCSCSCCBC
T ss_pred hhhHhcCcEEEEeCccceECCcEEE
Confidence 3667789999999999999987643
No 23
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=26.47 E-value=44 Score=27.40 Aligned_cols=26 Identities=23% Similarity=0.204 Sum_probs=20.9
Q ss_pred hHHhhhcCcceEEccCCCccCCCceE
Q psy8074 139 DACETMGNATAICSDKTGTLTTNRMT 164 (376)
Q Consensus 139 ~~~E~LG~v~~i~~DKTGTLT~n~m~ 164 (376)
...+.+..+..++||--|||+.+...
T Consensus 11 ~~~~~~~~ik~vifD~DGTL~d~~~~ 36 (189)
T 3mn1_A 11 DLMQRGKAIKLAVFDVDGVLTDGRLY 36 (189)
T ss_dssp HHHHHHHTCCEEEECSTTTTSCSEEE
T ss_pred HHHHHHHhCCEEEEcCCCCcCCccEe
Confidence 44566778999999999999998543
No 24
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=20.82 E-value=24 Score=37.16 Aligned_cols=38 Identities=26% Similarity=0.351 Sum_probs=28.7
Q ss_pred eecCCCCceeeeeeeeccCCeeEEEecCchHHHHhccc
Q psy8074 330 VYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIVLKNYG 367 (376)
Q Consensus 330 ~~~~~glR~~m~~~~~~l~~a~k~~~~g~~~~~l~~~~ 367 (376)
..+|+..|.+|+++++...-.+..+.||+++.++++|.
T Consensus 397 ~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~ 434 (885)
T 3b8c_A 397 FLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAK 434 (885)
T ss_dssp CCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSC
T ss_pred cccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhcc
Confidence 34568889999988863233455688999999999885
No 25
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=20.27 E-value=3e+02 Score=24.10 Aligned_cols=28 Identities=14% Similarity=0.044 Sum_probs=17.9
Q ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHH
Q psy8074 39 KEKSVLQAKLTKLAIQIGYAGSTIAVLT 66 (376)
Q Consensus 39 ~~~t~l~~~l~~~~~~i~~~~~~~~~~~ 66 (376)
...||.-..+..+...+..+.+++.+++
T Consensus 20 ~~asp~a~~i~~l~~~~~~i~~~I~v~V 47 (262)
T 2gsm_B 20 PSASPVATQIHWLDGFILVIIAAITIFV 47 (262)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468888888888777655544444433
No 26
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=20.05 E-value=42 Score=27.17 Aligned_cols=23 Identities=30% Similarity=0.348 Sum_probs=18.5
Q ss_pred hhhcCcceEEccCCCccCCCceE
Q psy8074 142 ETMGNATAICSDKTGTLTTNRMT 164 (376)
Q Consensus 142 E~LG~v~~i~~DKTGTLT~n~m~ 164 (376)
+.+..++.++||--|||+.+...
T Consensus 7 ~~~~~~k~vifD~DGTL~d~~~~ 29 (176)
T 3mmz_A 7 PTAEDIDAVVLDFDGTQTDDRVL 29 (176)
T ss_dssp CCGGGCSEEEECCTTTTSCSCCE
T ss_pred hhHhcCCEEEEeCCCCcCcCCEe
Confidence 44556899999999999996554
Done!