Query psy8075
Match_columns 1074
No_of_seqs 396 out of 1277
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 17:46:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8075.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8075hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j1d_G DAAM1, disheveled-assoc 100.0 6.1E-90 2.1E-94 817.5 44.9 452 613-1073 19-481 (483)
2 3obv_E Protein diaphanous homo 100.0 1.3E-82 4.5E-87 745.6 45.6 430 609-1043 2-446 (457)
3 3eg5_B Protein diaphanous homo 100.0 1.3E-74 4.5E-79 666.4 33.6 362 42-425 9-382 (383)
4 4eah_A Formin-like protein 3, 100.0 8.1E-72 2.8E-76 645.8 36.2 355 614-983 24-383 (402)
5 1v9d_A Diaphanous protein homo 100.0 3.1E-69 1.1E-73 614.3 35.0 326 672-1001 4-332 (340)
6 1ux5_A BNI1 protein; structura 100.0 7.9E-68 2.7E-72 618.5 27.8 355 613-982 13-400 (411)
7 2bnx_A Diaphanous protein homo 100.0 2.6E-67 9E-72 606.8 27.5 326 96-442 3-339 (386)
8 2f31_A Diaphanous protein homo 100.0 2.5E-48 8.5E-53 419.9 23.7 224 98-341 1-233 (233)
9 4dvg_B Diaphanous protein; cyt 99.7 8E-15 2.7E-19 145.6 23.7 302 42-371 3-337 (353)
10 3dad_A FH1/FH2 domain-containi 99.6 2.5E-14 8.4E-19 157.9 23.0 210 99-332 120-332 (339)
11 2z73_A Rhodopsin; visual pigme 97.0 9.6E-05 3.3E-09 86.3 0.0 8 277-284 216-223 (448)
12 4db8_A Armadillo-repeat protei 94.9 0.76 2.6E-05 48.2 17.5 182 99-323 14-196 (252)
13 3grl_A General vesicular trans 94.1 0.47 1.6E-05 57.1 14.7 221 42-310 15-257 (651)
14 4db6_A Armadillo repeat protei 93.3 1.4 4.6E-05 44.8 15.0 166 126-324 30-197 (210)
15 4hxt_A De novo protein OR329; 93.1 1.6 5.6E-05 45.2 15.7 167 125-323 19-186 (252)
16 3iot_A Maltose-binding protein 92.9 0.1 3.5E-06 60.7 6.4 11 274-284 274-285 (449)
17 3tpo_A Importin subunit alpha- 92.7 1.1 3.8E-05 53.2 15.1 166 146-325 288-486 (529)
18 3iot_A Maltose-binding protein 91.9 0.03 1E-06 65.4 0.0 9 235-243 188-196 (449)
19 3ul1_B Importin subunit alpha- 91.7 1.1 3.7E-05 53.1 13.4 170 142-325 265-467 (510)
20 4hxt_A De novo protein OR329; 91.5 2.9 0.0001 43.2 15.1 152 141-323 76-228 (252)
21 4db8_A Armadillo-repeat protei 91.3 1.9 6.5E-05 45.0 13.5 153 141-323 86-238 (252)
22 3tpo_A Importin subunit alpha- 90.5 2.9 0.0001 49.4 15.6 101 124-228 92-192 (529)
23 3ul1_B Importin subunit alpha- 89.9 5.3 0.00018 47.0 17.0 117 97-228 57-173 (510)
24 1xqr_A HSPBP1 protein; armadil 87.7 10 0.00035 41.4 16.1 166 124-323 56-225 (296)
25 4b8j_A Importin subunit alpha- 86.6 7 0.00024 45.8 15.2 163 141-326 318-486 (528)
26 4db6_A Armadillo repeat protei 83.8 9.5 0.00033 38.3 12.7 84 140-228 85-168 (210)
27 4b8j_A Importin subunit alpha- 82.2 21 0.00071 41.7 16.5 101 124-228 90-190 (528)
28 3cve_A Homer protein homolog 1 80.5 17 0.00058 30.9 10.4 60 441-500 5-64 (72)
29 1xqr_A HSPBP1 protein; armadil 80.3 12 0.00041 40.8 12.5 137 127-285 101-238 (296)
30 1wa5_B Importin alpha subunit; 78.0 26 0.00088 41.0 15.5 78 144-227 292-370 (530)
31 3cvf_A Homer-3, homer protein 76.4 13 0.00043 32.3 8.6 62 440-501 10-71 (79)
32 1jdh_A Beta-catenin; beta-cate 74.7 53 0.0018 37.8 16.9 81 142-227 92-172 (529)
33 2z6h_A Catenin beta-1, beta-ca 73.3 67 0.0023 38.5 17.8 81 142-227 89-169 (644)
34 2z6g_A B-catenin; FULL-length, 72.3 65 0.0022 39.9 17.6 80 143-227 226-305 (780)
35 2jdq_A Importin alpha-1 subuni 71.9 37 0.0013 38.2 14.2 156 143-323 268-430 (450)
36 3now_A UNC-45 protein, SD10334 69.4 33 0.0011 42.8 13.7 144 143-316 615-759 (810)
37 2jdq_A Importin alpha-1 subuni 65.7 1.3E+02 0.0043 33.6 17.0 119 146-285 229-348 (450)
38 1wa5_B Importin alpha subunit; 65.6 1.2E+02 0.0041 35.1 17.3 100 125-228 104-203 (530)
39 2z6h_A Catenin beta-1, beta-ca 64.7 61 0.0021 38.9 14.8 142 148-321 11-154 (644)
40 3mq9_A Bone marrow stromal ant 64.4 1.7E+02 0.0059 33.5 18.1 71 393-469 351-423 (471)
41 1nxk_A MAP kinase-activated pr 62.1 1.8 6.3E-05 49.3 0.5 12 784-795 167-178 (400)
42 3ghg_A Fibrinogen alpha chain; 60.8 55 0.0019 37.9 12.0 29 475-503 114-142 (562)
43 2h8h_A Proto-oncogene tyrosine 60.3 1.8 6.2E-05 51.4 0.0 21 877-897 360-380 (535)
44 1upk_A MO25 protein; transfera 60.0 1.2E+02 0.0041 33.5 14.3 143 97-246 10-192 (341)
45 3u1c_A Tropomyosin alpha-1 cha 59.9 99 0.0034 27.9 12.0 28 439-466 33-60 (101)
46 3bas_A Myosin heavy chain, str 58.2 98 0.0033 27.2 11.4 6 504-509 75-80 (89)
47 3grl_A General vesicular trans 57.5 75 0.0026 38.3 13.2 162 96-285 16-195 (651)
48 3now_A UNC-45 protein, SD10334 56.8 86 0.0029 39.1 14.1 153 143-323 487-639 (810)
49 3q8t_A Beclin-1; autophagy, AT 56.8 1.1E+02 0.0037 27.4 13.3 72 440-511 22-93 (96)
50 1xm9_A Plakophilin 1; armadill 56.5 42 0.0014 38.6 10.8 105 126-236 20-125 (457)
51 2v4h_A NF-kappa-B essential mo 55.9 1.2E+02 0.0042 27.7 11.4 37 476-512 67-103 (110)
52 2z6g_A B-catenin; FULL-length, 55.9 1.1E+02 0.0036 38.0 15.0 144 147-322 146-291 (780)
53 1jdh_A Beta-catenin; beta-cate 55.0 1.3E+02 0.0043 34.5 14.8 140 149-320 15-156 (529)
54 3nmw_A APC variant protein; AR 53.6 1E+02 0.0034 34.3 12.9 151 145-323 164-321 (354)
55 2ets_A Hypothetical protein; s 53.4 1.3E+02 0.0043 28.5 11.3 64 912-986 41-120 (128)
56 3u59_A Tropomyosin beta chain; 50.7 1.4E+02 0.0048 26.8 12.0 11 449-459 43-53 (101)
57 3hnw_A Uncharacterized protein 50.1 1.8E+02 0.0061 27.8 13.7 9 398-406 36-44 (138)
58 2h8h_A Proto-oncogene tyrosine 47.8 3.9 0.00013 48.6 0.0 11 639-649 155-165 (535)
59 3hnw_A Uncharacterized protein 47.7 1.9E+02 0.0066 27.6 12.3 7 449-455 88-94 (138)
60 2v71_A Nuclear distribution pr 46.5 2.4E+02 0.0083 28.4 13.5 32 441-472 47-78 (189)
61 4h22_A Leucine-rich repeat fli 46.3 82 0.0028 28.5 8.3 42 439-480 33-74 (103)
62 3obv_E Protein diaphanous homo 45.1 97 0.0033 35.8 11.3 62 885-950 282-346 (457)
63 3oja_B Anopheles plasmodium-re 44.3 80 0.0027 37.5 10.9 38 473-510 539-576 (597)
64 2dfs_A Myosin-5A; myosin-V, in 44.1 1.4E+02 0.0049 38.3 13.6 17 53-69 308-324 (1080)
65 3nmw_A APC variant protein; AR 43.0 38 0.0013 37.8 7.2 98 126-228 53-157 (354)
66 1xm9_A Plakophilin 1; armadill 42.4 1.8E+02 0.0062 33.1 13.3 150 147-321 279-434 (457)
67 3oja_B Anopheles plasmodium-re 42.3 1.1E+02 0.0037 36.3 11.7 42 465-506 538-579 (597)
68 3nmz_A APC variant protein; pr 41.5 2.1E+02 0.0071 33.0 13.4 151 145-323 280-437 (458)
69 3h0g_A DNA-directed RNA polyme 39.1 6.3 0.00022 52.9 0.0 14 47-60 929-942 (1752)
70 3tt9_A Plakophilin-2; cell adh 38.5 67 0.0023 33.6 7.8 89 142-236 43-133 (233)
71 1v9d_A Diaphanous protein homo 38.5 1.7E+02 0.0057 32.3 11.6 65 885-951 211-276 (340)
72 3h0g_A DNA-directed RNA polyme 38.2 6.7 0.00023 52.7 0.0 7 100-106 818-824 (1752)
73 2qk2_A LP04448P; mini spindles 36.4 2.1E+02 0.0073 29.0 11.5 135 122-286 29-163 (242)
74 2p22_C Protein SRN2; endosome, 36.4 82 0.0028 31.9 7.8 46 929-981 130-175 (192)
75 1go4_E MAD1 (mitotic arrest de 35.9 1.8E+02 0.0061 26.3 8.9 34 435-468 11-44 (100)
76 2nsz_A Programmed cell death p 35.4 78 0.0027 29.8 7.0 62 174-242 24-94 (129)
77 2ion_A PDCD4, programmed cell 35.3 54 0.0019 31.9 6.0 63 174-243 26-97 (152)
78 3opb_A SWI5-dependent HO expre 34.5 1.4E+02 0.0047 36.9 10.7 124 145-286 599-729 (778)
79 3nmz_A APC variant protein; pr 34.3 85 0.0029 36.3 8.6 96 126-228 355-451 (458)
80 2fxo_A Myosin heavy chain, car 34.3 2.9E+02 0.01 25.8 13.0 11 500-510 112-122 (129)
81 3m91_A Proteasome-associated A 34.1 1.4E+02 0.0048 23.5 6.9 34 446-479 12-45 (51)
82 1f5n_A Interferon-induced guan 34.0 6.7E+02 0.023 29.8 16.7 31 439-469 490-520 (592)
83 3opb_A SWI5-dependent HO expre 32.8 1.6E+02 0.0055 36.3 10.9 99 173-282 576-681 (778)
84 4ffb_C Protein STU2; tubulin f 31.6 1.8E+02 0.0062 30.5 10.2 93 171-285 70-168 (278)
85 3nwa_A GB, GB-1, GB1, envelope 31.1 10 0.00035 45.2 0.0 10 623-632 143-152 (703)
86 1ic2_A Tropomyosin alpha chain 30.1 2.6E+02 0.0089 23.9 11.4 6 444-449 21-26 (81)
87 3a2a_A Voltage-gated hydrogen 30.0 1.2E+02 0.0042 24.0 5.8 36 442-477 10-45 (58)
88 3u1c_A Tropomyosin alpha-1 cha 27.5 3.3E+02 0.011 24.3 12.2 50 439-488 19-68 (101)
89 3t98_B Nucleoporin NUP58/NUP45 27.1 1.6E+02 0.0055 26.2 7.1 34 920-954 59-92 (93)
90 3pgw_A U1-A; protein-RNA compl 26.3 2.1E+02 0.0073 29.8 9.5 14 638-651 218-231 (282)
91 3m91_B Prokaryotic ubiquitin-l 26.0 25 0.00086 26.5 1.3 28 125-152 16-43 (44)
92 2qk1_A Protein STU2; STU2P, XM 26.0 2.6E+02 0.0089 29.0 10.0 134 122-286 30-176 (249)
93 2v71_A Nuclear distribution pr 25.6 5.2E+02 0.018 25.9 15.9 7 392-398 11-17 (189)
94 3u59_A Tropomyosin beta chain; 25.6 3.6E+02 0.012 24.0 12.2 33 439-471 19-51 (101)
95 3cve_A Homer protein homolog 1 25.4 3.1E+02 0.011 23.2 8.1 44 439-482 24-67 (72)
96 3cvf_A Homer-3, homer protein 25.3 3E+02 0.01 23.7 8.1 46 438-483 29-74 (79)
97 3q8t_A Beclin-1; autophagy, AT 25.2 3.6E+02 0.012 23.9 12.1 46 439-484 7-52 (96)
98 2eqb_B RAB guanine nucleotide 25.2 2E+02 0.0069 25.7 7.2 14 463-476 46-59 (97)
99 4emc_A Monopolin complex subun 24.9 2.8E+02 0.0097 27.8 9.0 34 454-487 24-57 (190)
100 1deq_A Fibrinogen (alpha chain 24.8 44 0.0015 37.1 3.6 187 763-956 53-248 (390)
101 3vmx_A Voltage-gated hydrogen 24.7 2.5E+02 0.0084 21.8 6.9 33 444-476 5-37 (48)
102 3vkg_A Dynein heavy chain, cyt 24.4 2.9E+02 0.0099 39.9 12.3 35 274-308 1718-1758(3245)
103 3ebb_A Phospholipase A2-activa 24.2 6.9E+02 0.024 26.9 13.6 97 124-223 118-216 (304)
104 2qk1_A Protein STU2; STU2P, XM 24.1 1.1E+02 0.0039 31.9 6.7 58 171-228 161-221 (249)
105 2dfs_A Myosin-5A; myosin-V, in 23.8 3.6E+02 0.012 34.7 12.3 39 450-488 984-1022(1080)
106 2rg8_A Programmed cell death p 23.7 91 0.0031 30.7 5.4 45 174-226 27-72 (165)
107 2jee_A YIIU; FTSZ, septum, coi 22.6 3.8E+02 0.013 23.2 10.7 12 444-455 28-39 (81)
108 1i84_S Smooth muscle myosin he 22.6 2.9E+02 0.01 35.9 11.4 27 123-149 420-446 (1184)
109 3na7_A HP0958; flagellar bioge 22.5 6.1E+02 0.021 26.4 12.1 25 442-466 117-141 (256)
110 1uix_A RHO-associated kinase; 22.2 3.5E+02 0.012 22.8 10.0 24 445-468 6-29 (71)
111 3gs3_A Symplekin, LD45768P; he 22.2 1.8E+02 0.0062 30.8 7.7 83 172-284 87-172 (257)
112 4hpq_C ATG17, KLTH0D15642P; au 22.1 8.9E+02 0.03 27.3 19.0 65 877-949 235-299 (413)
113 3ltm_A Alpha-REP4; protein eng 21.8 5.6E+02 0.019 24.9 11.5 69 143-227 42-110 (211)
114 3vkg_A Dynein heavy chain, cyt 21.7 4.2E+02 0.014 38.2 13.1 43 438-480 1922-1964(3245)
115 3mq9_A Bone marrow stromal ant 21.3 7.3E+02 0.025 28.0 13.6 39 452-490 399-437 (471)
116 2hfi_A Hypothetical protein YP 20.9 5.3E+02 0.018 24.3 11.8 68 910-988 32-118 (131)
117 2qk2_A LP04448P; mini spindles 20.9 1.2E+02 0.0039 31.2 5.9 58 171-228 148-206 (242)
118 3o2t_A Symplekin; heat repeat, 20.6 2.5E+02 0.0086 31.6 8.8 83 173-285 98-183 (386)
No 1
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=100.00 E-value=6.1e-90 Score=817.49 Aligned_cols=452 Identities=46% Similarity=0.812 Sum_probs=357.8
Q ss_pred CCCCCcccCcCCCcccccCccchhccCCHHHHHHHhhhhccCCCC------C-C--CCccccccccccccCccccccchh
Q psy8075 613 PYFPNVSVQVNGTIWTELDESKLYASMELEVVDKLFCAYQKNGVP------A-D--GSVEDLTKLGKISKSKILSVIDGR 683 (1074)
Q Consensus 613 p~~~lk~~~i~~TiW~~~~~~~~~~~ld~~~lE~lF~~~~~~~~~------~-~--~~~~~~~~~~k~kk~k~isvLD~k 683 (1074)
.|.++..+++.+|||+++++.+++..+|+++||++|++++..... + + ++..+...+ .+|+++++|||+|
T Consensus 19 ~W~ki~~~~~~~TiW~~~~~~~~~~~ld~~~lE~lF~~~~~~~~~~~~~~~~~k~~~s~~~~~~~--~kk~~~v~lLD~k 96 (483)
T 2j1d_G 19 NWSKLPENKLEGTVWTEIDDTKVFKILDLEDLERTFSAYQRQQDFFVNSNSKQKEADAIDDTLSS--KLKVKELSVIDGR 96 (483)
T ss_dssp CCCCCCGGGCSSSGGGGCCGGGHHHHSCHHHHHHHTBSBC-------------------------------CCBCCSCHH
T ss_pred CceECCcccccCCccCcCCchhhccccCHHHHHHHHhhhcccccccccccccccccccccccccc--ccCCCcceeCCHH
Confidence 355665678899999999999888889999999999987654320 0 0 111111111 2577889999999
Q ss_pred hhhhHHHHhccCCCCHHHHHHHHHcCCCCCCCCHHHHHHHHhcCCCHHHHHHHhhccC--CCCChHHHHHHHHhCCCchH
Q psy8075 684 RAQNCTILLSKLKMTDEEISKAILSMDSADQLPLDMLEQLLKFTPNTEEAALLEEHST--ETLARADRFLYEISKIPHYE 761 (1074)
Q Consensus 684 raqNi~I~L~~lk~~~~ei~~aI~~~D~~~~L~~e~l~~Llk~lPt~eE~~~l~~~~~--~~L~~aeqF~~~l~~ip~~~ 761 (1074)
|||||+|+|++|++|+++|++||++||+...|+.|.|+.|++++||+||++.|++|.+ +.|++||||+++|+.||+|.
T Consensus 97 RaqNi~I~L~~lk~~~~ei~~aIl~~D~~~~L~~e~l~~Ll~~~Pt~eE~~~l~~~~~d~~~L~~aEqFl~~l~~ip~~~ 176 (483)
T 2j1d_G 97 RAQNCNILLSRLKLSNDEIKRAILTMDEQEDLPKDMLEQLLKFVPEKSDIDLLEEHKHELDRMAKADRFLFEMSRINHYQ 176 (483)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHTTSTTCCCCHHHHHHHHHSCCCHHHHHHHHTTTTCGGGBCHHHHHHHHHHTSTTHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHccCccccCCHHHHHHHHHhCCCHHHHHHHHHhccChhhcCHHHHHHHHHhCCccHH
Confidence 9999999999999999999999999998238999999999999999999999999988 89999999999999999999
Q ss_pred HHHHHHHHHHhhHhhHHhhhHhHHHHHHHHHHHhhcHhHHHHHHHHHHhccccCCCCCCCccceeccccccccccccCCC
Q psy8075 762 QRLRCLHYKKRFHFWISDIEPKIKSVMEASREVTRSRRLRKLLELVLALGNYMNKGARGNASGFRLTSLNKLVDTKSSSS 841 (1074)
Q Consensus 762 ~RL~~l~fk~~f~~~~~~l~~~l~~v~~A~~~l~~S~~l~~lL~~IL~iGNymN~g~rg~A~GFkL~sL~KL~dtKs~~d 841 (1074)
+||+||+|+.+|++.+.++.+.|.+|..||++|++|.+|+.||++||++|||||+|.||+|+||+|+||.||.||||+.|
T Consensus 177 ~Rl~~l~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~IL~~GN~mN~g~rg~A~GFkL~sL~KL~d~Ks~~d 256 (483)
T 2j1d_G 177 QRLQSLYFKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKGQRGNAYGFKISSLNKIADTKSSID 256 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCSSSCCCSCCCGGGGGGGGGSBCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhhhccCCCCCceeeehHHHHhhhhcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999658
Q ss_pred CCcchHHHHHHHHHHhhhhccchhhhhhhHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCchhhHHHH
Q psy8075 842 RGVTLLHYLVELAEKRFKEVLKLEEDLCHVKEASKVSMKELENDMTQLRNNLKEVSREIEFQRVQPLVPGDRFLPVMKEF 921 (1074)
Q Consensus 842 ~k~TLLhylv~~v~~~~p~ll~f~~eL~~v~~Aakvs~~~l~~d~~~l~~~l~~~~~el~~~~~~~~~~~D~f~~~m~~F 921 (1074)
+++|||||||++|+++||++++|.+||.+|..|++|++++|.+++.+|.++++.++++++.....+.+++|.|..+|.+|
T Consensus 257 ~k~TLLhylv~~v~~~~p~l~~f~~eL~~v~~Askv~~~~l~~~~~~L~~~l~~v~~~l~~~~~~~~~~~d~f~~~m~~F 336 (483)
T 2j1d_G 257 KNITLLHYLITIVENKYPSVLNLNEELRDIPQAAKVNMTELDKEISTLRSGLKAVETELEYQKSQPPQPGDKFVSVVSQF 336 (483)
T ss_dssp TTCBHHHHHHHHHHHHCGGGGGHHHHTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHH
T ss_pred CCccHHHHHHHHHHHhCchhhchHHHHhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987665556889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8075 922 LTSATCRLSEIEDLFQDMKTRFDRAVRLFGEDNSSIQPEDFFVIFDTFLTTLNEAKLDNENMKRRREEEEKRARQDAEMK 1001 (1074)
Q Consensus 922 ~~~a~~~~~~L~~~~~~~~~~~~~l~~yfGEd~~~~~~~eFF~~~~~F~~~f~~a~~en~~~~~~~e~eekr~~~e~~~~ 1001 (1074)
+..|..++..|+..+.++.+.|.+++.|||||++++++++||++|.+|+..|++|++||+++++++|+|+||++++++++
T Consensus 337 l~~a~~~~~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~~~fF~~~~~F~~~f~~A~~en~~~~~~~e~eekr~~~e~~~~ 416 (483)
T 2j1d_G 337 ITVASFSFSDVEDLLAEAKDLFTKAVKHFGEEAGKIQPDEFFGIFDQFLQAVSEAKQENENMRKKKEEEERRARMEAQLK 416 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhhccccccccccCCCCcccHHHHHHHHhcCCCCCchhhhhhhhcccCCCCCCCCCccccccccccC
Q psy8075 1002 KRTTDRKQGAKENGVVISNGSVKGEFDDLISALRTGDVFGEDSIAKIKRSRRSRHSPSSAREDTRERVIGKN 1073 (1074)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~~~~~~~g~~D~Ll~~Lr~G~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1074)
++++++++.++.. ..++++|+||+||++||+|++|+++ ++|+||||||. ++++.+.+|||+++|.
T Consensus 417 ~~~~~~r~~~~~~----~~~~~~g~~D~Ll~~Lr~g~~f~~~-~~~~~r~~~~~--~~~~~~~~~~~~~~~~ 481 (483)
T 2j1d_G 417 EQRERERKMRKAK----ENSEESGEFDDLVSALRSGEVFDKD-LSKLKRNRKRI--TNQMTDSSRERPITKL 481 (483)
T ss_dssp HHHHHHHHHHHC------------------------------------------------------------
T ss_pred HHHHHHHHhccCC----CCCcccccHHHHHHHHhCCCccccc-hhhhhccccCC--CCCCCCcccccccccc
Confidence 6666655433321 2357889999999999999999999 99999999988 8888999999999874
No 2
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=100.00 E-value=1.3e-82 Score=745.60 Aligned_cols=430 Identities=29% Similarity=0.467 Sum_probs=367.5
Q ss_pred CCCCCCCCCcc--------cCc-CCCcccccCccchhccCCHHHHHHHhhhhccCCCCCC--CCccccccccccccCccc
Q psy8075 609 RIPRPYFPNVS--------VQV-NGTIWTELDESKLYASMELEVVDKLFCAYQKNGVPAD--GSVEDLTKLGKISKSKIL 677 (1074)
Q Consensus 609 ~~~~p~~~lk~--------~~i-~~TiW~~~~~~~~~~~ld~~~lE~lF~~~~~~~~~~~--~~~~~~~~~~k~kk~k~i 677 (1074)
+.++|.++||+ +++ ++|||.++++.++....+|++||.+|+++++....++ .++++. .+..++|+++|
T Consensus 2 k~~~P~~~mK~l~W~ki~~~~~~~~t~W~~~~e~~~~~~~~f~~Le~~F~~~~~~~~~~k~~~~~~~~-~~~~~kk~~~v 80 (457)
T 3obv_E 2 KVYKPEVQLRRPNWSKFVAEDLSQDCFWTKVKEDRFENNELFAKLTLAFSAQTKTSKAKKDQEGGEEK-KSVQKKKVKEL 80 (457)
T ss_dssp CCCCCSSCBCCCCCCEECTTTTCSSSSGGGCCGGGGCCTTHHHHHHHHTBCC------------------------CCCC
T ss_pred CCCCCCCCCcCCCceeCCccccCCCceeeeCccccccChhHHHHHHHHhccccccccccccccccccc-ccccccCCcee
Confidence 34556666665 454 6999999999988776778999999999865432221 111111 11223688899
Q ss_pred cccchhhhhhHHHHhccCCCCHHHHHHHHHcCCCCCCCCHHHHHHHHhcCCCHHHHHHHhhccC--CCCChHHHHHHHHh
Q psy8075 678 SVIDGRRAQNCTILLSKLKMTDEEISKAILSMDSADQLPLDMLEQLLKFTPNTEEAALLEEHST--ETLARADRFLYEIS 755 (1074)
Q Consensus 678 svLD~kraqNi~I~L~~lk~~~~ei~~aI~~~D~~~~L~~e~l~~Llk~lPt~eE~~~l~~~~~--~~L~~aeqF~~~l~ 755 (1074)
+|||+||||||+|+|++|++|+++|++||++||+. .|+.+.|+.|++++||++|++.|++|.+ +.|++||||+++|+
T Consensus 81 ~lLD~kraqNi~I~L~~lk~~~~ei~~aI~~~D~~-~L~~e~l~~L~~~~Pt~eE~~~l~~~~~d~~~L~~~EqF~~~l~ 159 (457)
T 3obv_E 81 KVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEA-VLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAESEQFGVVMG 159 (457)
T ss_dssp SSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCTT-TCCHHHHHHHHHHCCCHHHHHHHHTTTTSGGGSCHHHHHHHHHT
T ss_pred EecCHHHHhHHHHHHhccCCCHHHHHHHHHhCCcc-cCCHHHHHHHHHhCCCHHHHHHHHHhccChhhcCHHHHHHHHHH
Confidence 99999999999999999999999999999999994 9999999999999999999999999988 89999999999999
Q ss_pred CCCchHHHHHHHHHHHhhHhhHHhhhHhHHHHHHHHHHHhhcHhHHHHHHHHHHhccccCCC-CCCCccceecccccccc
Q psy8075 756 KIPHYEQRLRCLHYKKRFHFWISDIEPKIKSVMEASREVTRSRRLRKLLELVLALGNYMNKG-ARGNASGFRLTSLNKLV 834 (1074)
Q Consensus 756 ~ip~~~~RL~~l~fk~~f~~~~~~l~~~l~~v~~A~~~l~~S~~l~~lL~~IL~iGNymN~g-~rg~A~GFkL~sL~KL~ 834 (1074)
.||+|.+||+||+|+.+|++.+.+|.+.|.+|..||++|++|.+|+.||++||++|||||+| .+|+|+||+|+||.||.
T Consensus 160 ~Ip~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~iL~~GN~mN~g~~~g~A~GFkL~sL~KL~ 239 (457)
T 3obv_E 160 TVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLR 239 (457)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTTSTTCSCSCBCGGGHHHHT
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhhhccCCcCCCeeeEehHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 56999999999999999
Q ss_pred ccccCCCCCcchHHHHHHHHHHhhhhccchhhhhhhHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCc
Q psy8075 835 DTKSSSSRGVTLLHYLVELAEKRFKEVLKLEEDLCHVKEASKVSMKELENDMTQLRNNLKEVSREIEFQRVQPLVPGDRF 914 (1074)
Q Consensus 835 dtKs~~d~k~TLLhylv~~v~~~~p~ll~f~~eL~~v~~Aakvs~~~l~~d~~~l~~~l~~~~~el~~~~~~~~~~~D~f 914 (1074)
||||+ |+++||||||+++|+++||+++.|.+||.+|..|++||+++|.+++.+|.++++.++++++.... +.++.|+|
T Consensus 240 d~Ks~-d~k~TLLh~l~~~v~~~~p~l~~f~~eL~~v~~Aakvs~~~l~~dl~~L~~~l~~v~~~l~~~~~-~~~~~d~f 317 (457)
T 3obv_E 240 DTKSA-DQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPA-ATDEKDKF 317 (457)
T ss_dssp TCBCS-STTCBHHHHHHHHHHHHCGGGGGHHHHCTTHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHSCCC-CSSTTCCH
T ss_pred hhhcC-CCCccHHHHHHHHHHHcCccccCChhhhhhHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccC-CcchhHHH
Confidence 99996 89999999999999999999999999999999999999999999999999999999999976532 34678999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8075 915 LPVMKEFLTSATCRLSEIEDLFQDMKTRFDRAVRLFGEDNSSIQPEDFFVIFDTFLTTLNEAKLDNENMKRRREEEEKRA 994 (1074)
Q Consensus 915 ~~~m~~F~~~a~~~~~~L~~~~~~~~~~~~~l~~yfGEd~~~~~~~eFF~~~~~F~~~f~~a~~en~~~~~~~e~eekr~ 994 (1074)
..+|.+|+..|..++..|+..+..|.+.|.+++.|||||++++++++||++|.+|+..|++|++||++. +++|++++|+
T Consensus 318 ~~~m~~Fl~~A~~~~~~L~~~~~~~~~~~~~l~~yFgedp~~~~~~eFF~~~~~F~~~fkkA~~eN~~r-~e~eek~~r~ 396 (457)
T 3obv_E 318 VEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKR-RETEEKMRRA 396 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999863 3445556777
Q ss_pred HHHHHHHHHHHHHhhcccccccc-ccCCCCcccHHHHHHHHhcCCCCCch
Q psy8075 995 RQDAEMKKRTTDRKQGAKENGVV-ISNGSVKGEFDDLISALRTGDVFGED 1043 (1074)
Q Consensus 995 ~~e~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~D~Ll~~Lr~G~~f~~~ 1043 (1074)
++++++++++..++++++.+... ..+++++||||+||++||||++|+++
T Consensus 397 ~~a~e~~~~~~~e~~~~~~~~~~~~~~~~~~gv~D~Ll~~l~sg~~f~~~ 446 (457)
T 3obv_E 397 KLAKEKAEKERLEKQQKREQLIDMNAEGDETGVMDSLLEALQSGAAFRRK 446 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCTTSCSCCCCHHHHHHHHHHHSTTC---
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCccccccHHHHHHHHhcchhhhcc
Confidence 77777764333233323333222 13478999999999999999999754
No 3
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=100.00 E-value=1.3e-74 Score=666.45 Aligned_cols=362 Identities=26% Similarity=0.453 Sum_probs=313.1
Q ss_pred CCCChhhHHHHHHHHHHhcCCChhHHHhhcCCChHHHHHHHHhhcccc---cCCCCCCCChHHHHHHHhcccCCCCCCCC
Q psy8075 42 PIPPTNELNTMFEELVEELDLTAPNKAAMLSLPDEKKWQIYCSRKMDQ---TSTTDAPDNPEQYIEQLRNFKSSPLTEHD 118 (1074)
Q Consensus 42 ~~P~~~ei~~~F~~ll~~~nl~~~~~~~m~~~~~ekKw~li~~~~~~~---~~~~~~~~~P~~yi~~L~~~~~~~~~~~~ 118 (1074)
+|| ++||+++|++||++||++++++++|+++|.++||+||+++.... ...++...+|+|||++|++..
T Consensus 9 ~~s-e~ev~~~F~~mL~~mnl~~ek~~~l~~~~~e~Kw~mi~~~~~~~~~~~~~~~~~~sP~~yi~~L~~~~-------- 79 (383)
T 3eg5_B 9 DIS-DEQVLVLFEQMLVDMNLNEEKQQPLREKDIVIKREMVSQYLHTSKAGMNQKESSRSAMMYIQELRSGL-------- 79 (383)
T ss_dssp -------CCHHHHHHHHHTTCCHHHHHHHHSSCHHHHHHHHHHHHHHC---------CCCHHHHHHHHTTTC--------
T ss_pred cCC-HHHHHHHHHHHHHHcCCCHHHHHHHHhCCHHHHHHHHHHHHHHhhhccccccCCCCHHHHHHHHHhcc--------
Confidence 554 58899999999999999999999999999999999998874311 111234679999999998643
Q ss_pred hhhhhhHHHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccC------CcchhHHHHHHHHHHhcChhhHHH
Q psy8075 119 DTEIKSRTRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSG------QTSLHSSIIGCIKALMNNSTGRSH 192 (1074)
Q Consensus 119 ~~~~~~~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~------~~~~~~~~l~ClkalmN~~~G~~~ 192 (1074)
..+...++|.+|+|+|||++++||++|+ ++|+.+|+++|..++.++. +..++|+||+|||||||+++|++.
T Consensus 80 --~~~kl~~~L~sL~v~Lrt~~~sWV~~F~-~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkalmN~~~G~~~ 156 (383)
T 3eg5_B 80 --RDMHLLSCLESLRVSLTSHPVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKT 156 (383)
T ss_dssp --CHHHHHHHHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHHTSSHHHHHH
T ss_pred --cchhHHHHHHHHHHHHhhCccHHHHHHH-HccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHhcchhhHHH
Confidence 2235678999999999999999999998 8999999999999875543 346799999999999999999999
Q ss_pred hhcCccHHHHHHHhhcCCChhhHHHHHHHHHHHhccCC---chhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccch
Q psy8075 193 VLGYPGAIDIIAQSLSTENIKTKIAVLEILGAVCLIPG---GHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTD 269 (1074)
Q Consensus 193 vl~~~~~i~~la~sL~s~~~~tr~~v~elLaavc~~~~---Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~ 269 (1074)
|++|+.+|..|+.||++++++||++|+|||+|+|++++ ||++||+||++|+. ++|..||++||+.|... .+
T Consensus 157 vl~~~~~i~~l~~~L~s~~~~~~~~aleLL~~lc~~~~~~gG~~~VL~Al~~~~~-~~e~~RF~~lv~~L~~~-----~~ 230 (383)
T 3eg5_B 157 MLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAE-MDEVERFQPLLDGLKSG-----TS 230 (383)
T ss_dssp HHTCSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHH-HHTSCTTHHHHHTTSTT-----SC
T ss_pred HHcChHHHHHHHHHhCCCchHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHH-hCCCCcHHHHHHHHHcc-----Cc
Confidence 99999999999999999999999999999999999975 69999999999998 89999999999999653 47
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHhccCchHHHHHHHHHHHhHHhhHHHHHhhhcCCc
Q psy8075 270 VSIKTALMSFLNAVLSYGPGQHSLEFRLHLRYEVIMLGIQPIIDKLRTHENETLDRHLDFFEMLRHEDESELARKYETDH 349 (1074)
Q Consensus 270 ~~~~~a~m~lIN~lv~~~~~~~dl~~R~~lR~Ef~~~GL~~~l~~Lr~~~~~~L~~qi~~fe~~~~eDe~el~~~~~~~~ 349 (1074)
++|+++||+|||+||++ ++|+++|+|||+||.++||.+++++|+.+++++|++||++|++.+++|++|+.+|++.++
T Consensus 231 ~e~~~~~m~lIN~li~~---~~dl~~R~~lR~ef~~~Gl~~il~~lr~~~~~~L~~Qi~~fe~~~~eD~~el~~r~~~~~ 307 (383)
T 3eg5_B 231 IALKVGCLQLINALITP---AEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRLDDIR 307 (383)
T ss_dssp HHHHHHHHHHHHHHHTT---CCCHHHHHHHHHHHHHTTHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC---CCCHHHHHHHHHHHHHCChHHHHHHHhcCCChhHHHHHHHHHHHHHHhHHHHHhhccccC
Confidence 89999999999999997 579999999999999999999999999999999999999999999999999999999888
Q ss_pred cCCCCHHHHHHHHHHHhcCCCChhhHHHHHHHhccCCccCCCchhHHHHHHHHHHHHhhhcccCCCccchhhhhhH
Q psy8075 350 IETKSATSMFNILRRKLGHTAAYPHFLSLLHHCILLPLEFGCHPQHWLLLDRLAQQLTLQTETGEDYDHILLKINV 425 (1074)
Q Consensus 350 ~d~~~~~~v~~~l~~~~~~t~a~~~~lSiLQhLLli~~~~~~~~~~~~lld~~v~qivl~~~~g~d~d~~~l~~~v 425 (1074)
+|++||.+||++|++++++|++++||+|||||||+|++++..+++||+|||+||+||||+ ++|.||||++..++|
T Consensus 308 ~d~~d~~~~~~~l~~~~~~t~a~~~flSiLQhLlli~~d~~~~~~~~~Lid~~v~qivl~-~~g~dpd~~~~~~~~ 382 (383)
T 3eg5_B 308 MEMDDFGEVFQIILNTVKDSKAEPHFLSILQHLLLVRNDYEARPQYYKLIEECVSQIVLH-KNGTDPDFKCRHLQI 382 (383)
T ss_dssp HHCCSHHHHHHHHHHHTTTSTTHHHHHHHHHHTTCSCSSCTTHHHHHHHHHHHHHHHHCC----------------
T ss_pred cCcCCHHHHHHHHHHHhcCCcchHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHhc-cCCCCCCCCccCCCC
Confidence 999999999999999999999999999999999999998889999999999999999999 599999998755554
No 4
>4eah_A Formin-like protein 3, actin, alpha skeletal muscle; ATP binding, cytoskeleton, FMNL3, protein BIN; HET: ATP; 3.40A {Mus musculus}
Probab=100.00 E-value=8.1e-72 Score=645.82 Aligned_cols=355 Identities=30% Similarity=0.536 Sum_probs=319.3
Q ss_pred CCCCcccCcCCCcccccCccchhccCCHHHHHHHhhhhccCCCCCCCCccccccccccccCccccccchhhhhhHHHHhc
Q psy8075 614 YFPNVSVQVNGTIWTELDESKLYASMELEVVDKLFCAYQKNGVPADGSVEDLTKLGKISKSKILSVIDGRRAQNCTILLS 693 (1074)
Q Consensus 614 ~~~lk~~~i~~TiW~~~~~~~~~~~ld~~~lE~lF~~~~~~~~~~~~~~~~~~~~~k~kk~k~isvLD~kraqNi~I~L~ 693 (1074)
|.+++.+++.+|||+++++.++...+|+++||++|+++...... .......... .+++++++|||+||||||+|+|+
T Consensus 24 W~kl~~~~i~~Tiw~~~~~~~~~~~ld~~~~E~lF~~k~~~~~~--~~~~~k~k~~-~k~~~~v~lLd~kra~Ni~I~L~ 100 (402)
T 4eah_A 24 WTALKPNQINGTVFSELDDEKILEDLDLDRFEELFKTKAQGPAL--DLICSKNKTA-QKAASKVTLLEANRAKNLAITLR 100 (402)
T ss_dssp CCEECHHHHTTSTTSSCCTTSCSSTTTHHHHHHHSCCCC-----------------------CBCSSCHHHHHHHHHHHH
T ss_pred ceeCChHhccCccccCCchhhhccccCHHHHHHHHhhcccCCcc--ccchhccccc-ccCCCceeeCCHHHHHHHHHHHh
Confidence 55566688999999999999888889999999999975432110 0000000111 15677899999999999999999
Q ss_pred cCCCCHHHHHHHHHcCCCCCCCCHHHHHHHHhcCCCHHHHHHHhhccC-----CCCChHHHHHHHHhCCCchHHHHHHHH
Q psy8075 694 KLKMTDEEISKAILSMDSADQLPLDMLEQLLKFTPNTEEAALLEEHST-----ETLARADRFLYEISKIPHYEQRLRCLH 768 (1074)
Q Consensus 694 ~lk~~~~ei~~aI~~~D~~~~L~~e~l~~Llk~lPt~eE~~~l~~~~~-----~~L~~aeqF~~~l~~ip~~~~RL~~l~ 768 (1074)
+|++|+++|++||++||.. .|+.|.|+.|++++||++|++.|++|.+ +.|++||||+++|+.||+|.+||+||+
T Consensus 101 ~l~~~~~ei~~aI~~~D~~-~L~~e~l~~L~~~~Pt~eE~~~l~~~~~~~~~~~~L~~~EqF~~~l~~ip~~~~Rl~~l~ 179 (402)
T 4eah_A 101 KAGRSAEEICRAIHTFDLQ-TLPVDFVECLMRFLPTEAEVKLLRQYERERQPLEELAAEDRFMLLFSKVERLTQRMAGMA 179 (402)
T ss_dssp HHCCCHHHHHHHHHTTSCS-CCCHHHHHHHHHTCCCHHHHHHHHHHHHSSCCTTTBCHHHHHHHHHHHSTTHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHcCCcc-cCCHHHHHHHHhcCCCHHHHHHHHHhhccCCchhhccHHHHHHHHHHccccHHHHHHHHH
Confidence 9999999999999999995 9999999999999999999999999965 589999999999999999999999999
Q ss_pred HHHhhHhhHHhhhHhHHHHHHHHHHHhhcHhHHHHHHHHHHhccccCCCCCCCccceeccccccccccccCCCCCcchHH
Q psy8075 769 YKKRFHFWISDIEPKIKSVMEASREVTRSRRLRKLLELVLALGNYMNKGARGNASGFRLTSLNKLVDTKSSSSRGVTLLH 848 (1074)
Q Consensus 769 fk~~f~~~~~~l~~~l~~v~~A~~~l~~S~~l~~lL~~IL~iGNymN~g~rg~A~GFkL~sL~KL~dtKs~~d~k~TLLh 848 (1074)
|+.+|++.+.+|.+++..|..||++|++|.+|+.||++||++|||||+|.||+|+||+|+||.||.||||+ |+++||||
T Consensus 180 f~~~f~~~~~~l~~~l~~v~~A~~~l~~S~~l~~lL~~iL~~GN~mN~g~rg~A~GFkL~sL~KL~d~Ks~-d~k~TLLh 258 (402)
T 4eah_A 180 FLGNFQDNLQMLTPQLNAIIAASASVKSSQKLKQMLEIILALGNYMNSSKRGAVYGFKLQSLDLLLDTKST-DRKMTLLH 258 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCSSSCCCSCBCGGGGGSSSSSBCT-TSSSBHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhhccCCCCCccceeeHHHHHHHHhccCC-CCCccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999996 89999999
Q ss_pred HHHHHHHHhhhhccchhhhhhhHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCchhhHHHHHHHHHHH
Q psy8075 849 YLVELAEKRFKEVLKLEEDLCHVKEASKVSMKELENDMTQLRNNLKEVSREIEFQRVQPLVPGDRFLPVMKEFLTSATCR 928 (1074)
Q Consensus 849 ylv~~v~~~~p~ll~f~~eL~~v~~Aakvs~~~l~~d~~~l~~~l~~~~~el~~~~~~~~~~~D~f~~~m~~F~~~a~~~ 928 (1074)
||+++|+++||+++.|.+||.+|..|++||+++|.+++++|.++++.+++++..+ | ..+|.+|+..|..+
T Consensus 259 ~l~~~~~~~~p~l~~f~~eL~~v~~Aa~v~~~~l~~d~~~L~~~l~~~~~e~~~~--------d--~~~l~~Fl~~a~~~ 328 (402)
T 4eah_A 259 FIALTVKEKYPELANFWQELHFVEKAAAVSLENVLLDVKELGRGMELIRRECSIH--------D--NSVLRNFLSTNEGK 328 (402)
T ss_dssp HHHHHHHHHCGGGGTCSTTCCSHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTT--------C--CTTTHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHhhhhhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhccc--------c--hHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987532 1 14899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHH
Q psy8075 929 LSEIEDLFQDMKTRFDRAVRLFGEDNSSIQPEDFFVIFDTFLTTLNEAKLDNENM 983 (1074)
Q Consensus 929 ~~~L~~~~~~~~~~~~~l~~yfGEd~~~~~~~eFF~~~~~F~~~f~~a~~en~~~ 983 (1074)
+..|+..+..+.+.|.+++.|||||++++++++||++|.+|+..|++|++||+++
T Consensus 329 ~~~L~~~~~~~~~~~~~l~~yFgedpk~~~~~~fF~~~~~F~~~fk~A~~en~~r 383 (402)
T 4eah_A 329 LDKLQRDAKTAEEAYNAVVRYFGESPKTTPPSVFFPVFVRFIRSYKEAEQENEAR 383 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998764
No 5
>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1
Probab=100.00 E-value=3.1e-69 Score=614.34 Aligned_cols=326 Identities=32% Similarity=0.524 Sum_probs=284.7
Q ss_pred ccCccccccchhhhhhHHHHhccCCCCHHHHHHHHHcCCCCCCCCHHHHHHHHhcCCCHHHHHHHhhccC--CCCChHHH
Q psy8075 672 SKSKILSVIDGRRAQNCTILLSKLKMTDEEISKAILSMDSADQLPLDMLEQLLKFTPNTEEAALLEEHST--ETLARADR 749 (1074)
Q Consensus 672 kk~k~isvLD~kraqNi~I~L~~lk~~~~ei~~aI~~~D~~~~L~~e~l~~Llk~lPt~eE~~~l~~~~~--~~L~~aeq 749 (1074)
||+++++|||+||||||+|+|++|++|+++|++||++||.. .|+.|.|+.|++++||++|++.|++|.+ +.|++|||
T Consensus 4 kk~~~i~vLD~kraqNi~I~L~~~k~~~~ei~~aI~~~D~~-~L~~e~l~~L~~~~Pt~eE~~~l~~~~~~~~~L~~~Eq 82 (340)
T 1v9d_A 4 KKVKELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEA-VLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAESEQ 82 (340)
T ss_dssp --CCCCSSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCTT-TCCHHHHHHHHHHSCCHHHHHHHHTCGGGGGGSCHHHH
T ss_pred CCCCeeeecCHHHHhHHHHHHhhcCCCHHHHHHHHHhCCcc-cCCHHHHHHHHccCCCHHHHHHHHHhhCChhhcCHHHH
Confidence 68889999999999999999999999999999999999994 9999999999999999999999999988 89999999
Q ss_pred HHHHHhCCCchHHHHHHHHHHHhhHhhHHhhhHhHHHHHHHHHHHhhcHhHHHHHHHHHHhccccCCC-CCCCccceecc
Q psy8075 750 FLYEISKIPHYEQRLRCLHYKKRFHFWISDIEPKIKSVMEASREVTRSRRLRKLLELVLALGNYMNKG-ARGNASGFRLT 828 (1074)
Q Consensus 750 F~~~l~~ip~~~~RL~~l~fk~~f~~~~~~l~~~l~~v~~A~~~l~~S~~l~~lL~~IL~iGNymN~g-~rg~A~GFkL~ 828 (1074)
|++.|+.||+|.+||+||+|+.+|++.+.++.+.+.+|..||++|++|++|+.||++||++|||||+| .||+|+||+|+
T Consensus 83 F~~~l~~ip~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~iL~~GN~mN~g~~~g~A~GFkL~ 162 (340)
T 1v9d_A 83 FGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNIS 162 (340)
T ss_dssp HHHHHHTSTTHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHCC------------------------C
T ss_pred HHHHHHCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHcCcCCCCCCCCceeeeehH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 56999999999
Q ss_pred ccccccccccCCCCCcchHHHHHHHHHHhhhhccchhhhhhhHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy8075 829 SLNKLVDTKSSSSRGVTLLHYLVELAEKRFKEVLKLEEDLCHVKEASKVSMKELENDMTQLRNNLKEVSREIEFQRVQPL 908 (1074)
Q Consensus 829 sL~KL~dtKs~~d~k~TLLhylv~~v~~~~p~ll~f~~eL~~v~~Aakvs~~~l~~d~~~l~~~l~~~~~el~~~~~~~~ 908 (1074)
||.||.||||+ |+++||||||+++|+++||++++|.+||.+|+.|++||+++|.+++.+|.+++..++.+++.... ..
T Consensus 163 sL~KL~d~Ks~-d~k~TLLh~lv~~~~~~~p~l~~f~~eL~~v~~Askvs~~~l~~~l~~l~~~~~~~~~~l~~~~~-~~ 240 (340)
T 1v9d_A 163 FLCKLRDTKSA-DQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPA-AT 240 (340)
T ss_dssp CHHHHHHSBCS-STTSBHHHHHHHHHHHSCCTTSSGGGGCTTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTCCC-CS
T ss_pred HHHhhhhhcCC-CCCccHHHHHHHHHHHhCchhccchhHHHhHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhccc-cc
Confidence 99999999996 89999999999999999999999999999999999999999999999999999999999875432 23
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8075 909 VPGDRFLPVMKEFLTSATCRLSEIEDLFQDMKTRFDRAVRLFGEDNSSIQPEDFFVIFDTFLTTLNEAKLDNENMKRRRE 988 (1074)
Q Consensus 909 ~~~D~f~~~m~~F~~~a~~~~~~L~~~~~~~~~~~~~l~~yfGEd~~~~~~~eFF~~~~~F~~~f~~a~~en~~~~~~~e 988 (1074)
++.|+|..+|.+|+..|..++..|+..+.++.+.|.+++.||||||+++++++||++|.+|+..|++|++||++. +++|
T Consensus 241 ~~~d~f~~~m~~Fl~~a~~~~~~l~~~~~~~~~~~~~l~~yfged~~~~~~~~fF~~~~~F~~~f~~a~~en~~r-~e~e 319 (340)
T 1v9d_A 241 DEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKR-RETE 319 (340)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 678999999999999999999999999999999999999999999999999999999999999999999999873 3445
Q ss_pred HHHHHHHHHHHHH
Q psy8075 989 EEEKRARQDAEMK 1001 (1074)
Q Consensus 989 ~eekr~~~e~~~~ 1001 (1074)
+++||++++++++
T Consensus 320 ek~~~~~~~~e~~ 332 (340)
T 1v9d_A 320 EKMRRAKLAKEKA 332 (340)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5567777776665
No 6
>1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A
Probab=100.00 E-value=7.9e-68 Score=618.53 Aligned_cols=355 Identities=21% Similarity=0.355 Sum_probs=314.4
Q ss_pred CCCCCcccCcCCCcccccCccchhccC----CHHHHHHHhhhhccCCCCCCCCccccccccccccCccccccchhhhhhH
Q psy8075 613 PYFPNVSVQVNGTIWTELDESKLYASM----ELEVVDKLFCAYQKNGVPADGSVEDLTKLGKISKSKILSVIDGRRAQNC 688 (1074)
Q Consensus 613 p~~~lk~~~i~~TiW~~~~~~~~~~~l----d~~~lE~lF~~~~~~~~~~~~~~~~~~~~~k~kk~k~isvLD~kraqNi 688 (1074)
.|.+++. +++|||+++++.++...+ |+++||++|+++.... . .+.++++++.++|||+||||||
T Consensus 13 ~W~ki~~--~~~tiW~~~~~~~~~~~l~~~~d~~~lE~lF~~~~~~~---------~-~~~k~~~~~~v~lLd~kraqNi 80 (411)
T 1ux5_A 13 HWEKLDC--TDNSIWGTGKAEKFADDLYEKGVLADLEKAFAAREIKS---------L-ASKRKEDLQKITFLSRDISQQF 80 (411)
T ss_dssp CCCCCSS--CCSSSCCSSHHHHHHHHHHHTTHHHHHHHHTBSSCCHH---------H-HHHHHHTTTSBCCSCHHHHHHH
T ss_pred CcccCCC--CCCCcCcCCccHHHHHhhhhhchHHHHHHHhccccccc---------c-cccccCCCCeeeecChHHHHHH
Confidence 3666654 899999999988776554 8999999999764211 0 1122256778999999999999
Q ss_pred HHHhccC-CCCHHHHHHHHHcCCCCCCCCH-HHHHH------------HH-hcCCCHHHHHH------HhhccC--CCCC
Q psy8075 689 TILLSKL-KMTDEEISKAILSMDSADQLPL-DMLEQ------------LL-KFTPNTEEAAL------LEEHST--ETLA 745 (1074)
Q Consensus 689 ~I~L~~l-k~~~~ei~~aI~~~D~~~~L~~-e~l~~------------Ll-k~lPt~eE~~~------l~~~~~--~~L~ 745 (1074)
+|+|++| ++|+++|++||++||.. .|+. ++++. |+ +++||.+|++. ++.|.+ +.|+
T Consensus 81 ~I~L~~~~~~~~~ei~~ai~~~D~~-~L~~~~lie~L~~~~~~ei~~~L~~~~~P~~~e~e~l~~~~~~~~~~~d~~~L~ 159 (411)
T 1ux5_A 81 GINLHMYSSLSVADLVKKILNCDRD-FLQTPSVVEFLSKSEIIEVSVNLARNYAPYSTDWEGVRNLEDAKPPEKDPNDLQ 159 (411)
T ss_dssp HHHTGGGTTSCHHHHHHHHHTTTHH-HHTCHHHHHHTTCHHHHCCCHHHHHHTGGGCCCCTTCCCGGGCCCCSSCSTTBC
T ss_pred HHHHHhcCCCCHHHHHHHHHhcChh-hcCHHHHHHHhchhHHHhhHHHHHHhcCCCchhHHHHHHHHHhhhccCChhhCC
Confidence 9999999 89999999999999984 7884 34444 44 79999888763 334545 8999
Q ss_pred hHHHHHHHHh-CCC-chHHHHHHHHHHHhhHhhHHhhhHhHHHHHHHHHHHhhcHhHHHHHHHHHHhccccCCCCCCCcc
Q psy8075 746 RADRFLYEIS-KIP-HYEQRLRCLHYKKRFHFWISDIEPKIKSVMEASREVTRSRRLRKLLELVLALGNYMNKGARGNAS 823 (1074)
Q Consensus 746 ~aeqF~~~l~-~ip-~~~~RL~~l~fk~~f~~~~~~l~~~l~~v~~A~~~l~~S~~l~~lL~~IL~iGNymN~g~rg~A~ 823 (1074)
+||||+++++ .|| ++.+||+||+|+.+|++.+.++++++.+|..||++|++|++|+.||++||++|||||+|++ +|+
T Consensus 160 ~~eqf~~~l~~~i~~~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~iL~~GN~mN~g~~-~A~ 238 (411)
T 1ux5_A 160 RADQIYLQLMVNLESYWGSRMRALTVVTSYEREYNELLAKLRKVDKAVSALQESDNLRNVFNVILAVGNFMNDTSK-QAQ 238 (411)
T ss_dssp HHHHHHHHTTTTTTTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSCGGG-CCS
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhCcccCCCC-Cee
Confidence 9999999986 795 5799999999999999999999999999999999999999999999999999999999965 799
Q ss_pred ceeccccccccccccCCCCCcchHHHHHHHHHHhhhhccchhhhhhhHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy8075 824 GFRLTSLNKLVDTKSSSSRGVTLLHYLVELAEKRFKEVLKLEEDLCHVKEASKVSMKELENDMTQLRNNLKEVSREIEFQ 903 (1074)
Q Consensus 824 GFkL~sL~KL~dtKs~~d~k~TLLhylv~~v~~~~p~ll~f~~eL~~v~~Aakvs~~~l~~d~~~l~~~l~~~~~el~~~ 903 (1074)
||+|+||.||.||||+ |+++||||||+++|+++||++++|.+||.+|..|++|++++|.+++++|.++++.++++++..
T Consensus 239 GFkL~sL~KL~d~Ks~-d~k~TLLh~l~~~v~~~~p~l~~f~~eL~~v~~Aakv~~~~l~~d~~~L~~~l~~v~~~l~~~ 317 (411)
T 1ux5_A 239 GFKLSTLQRLTFIKDT-TNSMTFLNYVEKIVRLNYPSFNDFLSELEPVLDVVKVSIEQLVNDCKDFSQSIVNVERSVEIG 317 (411)
T ss_dssp CCCGGGGGGSSSCBCT-TSCSBHHHHHHHHHHHHCGGGGGHHHHTHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EeehhHHHHHHHhhCC-CCCccHHHHHHHHHHHhCcccccccchhhhHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999996 899999999999999999999999999999999999999999999999999999999999865
Q ss_pred hcC-C--CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-CCChhhhHHHHHHHHHHHHHHHHH
Q psy8075 904 RVQ-P--LVPGDRFLPVMKEFLTSATCRLSEIEDLFQDMKTRFDRAVRLFGEDNS-SIQPEDFFVIFDTFLTTLNEAKLD 979 (1074)
Q Consensus 904 ~~~-~--~~~~D~f~~~m~~F~~~a~~~~~~L~~~~~~~~~~~~~l~~yfGEd~~-~~~~~eFF~~~~~F~~~f~~a~~e 979 (1074)
... + .+++|+|..+|.+|+..|..++..|+..+..+.+.|.+++.|||||++ ++++++||++|.+|+..|++|++|
T Consensus 318 ~~s~~~~~~~~d~f~~~~~~fl~~a~~~~~~l~~~~~~~~~~~~~l~~yfged~~~~~~~~~fF~~~~~F~~~f~~a~~e 397 (411)
T 1ux5_A 318 NLSDSSKFHPLDKVLIKTLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYGEDSGDKFAKISFFKKFADFINEYKKAQAQ 397 (411)
T ss_dssp TTTCTTSSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 422 1 267899999999999999999999999999999999999999999998 478999999999999999999998
Q ss_pred HHH
Q psy8075 980 NEN 982 (1074)
Q Consensus 980 n~~ 982 (1074)
|++
T Consensus 398 n~~ 400 (411)
T 1ux5_A 398 NLA 400 (411)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 7
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=100.00 E-value=2.6e-67 Score=606.85 Aligned_cols=326 Identities=28% Similarity=0.498 Sum_probs=295.5
Q ss_pred CCChHHHHHHHhcccCCCCCCCChhhhhhHHHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccC------C
Q psy8075 96 PDNPEQYIEQLRNFKSSPLTEHDDTEIKSRTRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSG------Q 169 (1074)
Q Consensus 96 ~~~P~~yi~~L~~~~~~~~~~~~~~~~~~~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~------~ 169 (1074)
+.+|+|||++|++..+ .+..+++|.+|+|+|||++++||++|+ .+|+++|+++|.++..... +
T Consensus 3 ~~~P~~yv~~L~~~~~----------~~~~~~~L~~L~v~Lrt~~~~Wv~~F~-~~Gl~~Ll~~L~~~~~~~~~~~~~~d 71 (386)
T 2bnx_A 3 SRSAMMYIQELRSGLR----------DMHLLSCLESLRVSLNNNPVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYD 71 (386)
T ss_dssp CCCHHHHHHHHTSCCC----------HHHHHHHHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHHHTCCTTTCCTTH
T ss_pred CCCHHHHHHHHHhccc----------hHHHHHHHHHHhHHHhcCCcHHHHHHH-HhHHHHHHHHHHHHHhcccccccchh
Confidence 4689999999987542 234678999999999999999999997 7999999999998864432 3
Q ss_pred cchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHHHHHhccCC--c-hhHHHHHHhhHHHHc
Q psy8075 170 TSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEILGAVCLIPG--G-HKKVLDAMSHYQRFC 246 (1074)
Q Consensus 170 ~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elLaavc~~~~--G-h~~VL~Al~~~~~~~ 246 (1074)
..++++||+|||||||+++|++.|+.|+.+|..|+.||++++++||++|+|||+|+|++++ | |++||+||++|++ +
T Consensus 72 ~~~~~~~l~CLkalmN~~~Gl~~vl~~~~~i~~l~~sL~s~~~~~r~~vleLL~alc~~~~~~G~~~~VL~Al~~~~~-~ 150 (386)
T 2bnx_A 72 SRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAE-M 150 (386)
T ss_dssp HHHHHHHHHHHHHHTSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHH-h
Confidence 4578999999999999999999999999999999999999999999999999999999976 9 9999999999986 5
Q ss_pred ccccchHHHHHHhhhccCCccchhHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHhccCchHHHHH
Q psy8075 247 NERSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVLSYGPGQHSLEFRLHLRYEVIMLGIQPIIDKLRTHENETLDRH 326 (1074)
Q Consensus 247 ~e~~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN~lv~~~~~~~dl~~R~~lR~Ef~~~GL~~~l~~Lr~~~~~~L~~q 326 (1074)
+|+.||++||++|... ++++|+++||+|||+||++ ++|+++|+|||+||.++||.++|++|+.+++++|++|
T Consensus 151 ~e~~RF~~lv~~l~~~-----~~~e~~~a~m~lIN~lv~~---~~dl~~R~~LR~Ef~~~GL~~il~~Lr~~~~~~L~~Q 222 (386)
T 2bnx_A 151 DEVERFQPLLDGLKSG-----TSIALKVGCLQLINALITP---AEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQ 222 (386)
T ss_dssp HTSCTTHHHHHHTSTT-----SCHHHHHHHHHHHHHHHTT---CSCHHHHHHHHHHHHHTTHHHHHHHHTTCCCHHHHHH
T ss_pred CchhhHHHHHHHHHcC-----ChHHHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHHHCChHHHHHHHhccCChhHHHH
Confidence 8999999999999642 5789999999999999997 6799999999999999999999999999999999999
Q ss_pred HHHHHHhHHhhHHHHHhhhcCCccCCCCHHHHHHHHHHHhcCCCChhhHHHHHHHhccCCccCCCchhHHHHHHHHHHHH
Q psy8075 327 LDFFEMLRHEDESELARKYETDHIETKSATSMFNILRRKLGHTAAYPHFLSLLHHCILLPLEFGCHPQHWLLLDRLAQQL 406 (1074)
Q Consensus 327 i~~fe~~~~eDe~el~~~~~~~~~d~~~~~~v~~~l~~~~~~t~a~~~~lSiLQhLLli~~~~~~~~~~~~lld~~v~qi 406 (1074)
|++|++.+++|++|+.+|++.+.+|++||.+||+.|++++++|++++||+|||||||+|++|+..+++||+|||++|+||
T Consensus 223 i~~fe~~~~eD~~el~~r~~~i~~d~~d~~~~~~~l~~~~~~t~~~~~flSiLQhLLli~~d~~~~~~~~~Lid~~v~qi 302 (386)
T 2bnx_A 223 LCVFDEQGDEDFFDLKGRLDDIRMEMDDFGEVFQIILNTVKDSKAEPHFLSILQHLLLVRNDYEARPQYYKLIEECVSQI 302 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTTSTHHHHHHHHHHHHTTSCCCTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHcCCCchhHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999888999999999999999999999999999999999999999888999999999999999
Q ss_pred hhhcccCCCccch--hhhhhHHHHHHHHhhHHHHHHHH
Q psy8075 407 TLQTETGEDYDHI--LLKINVKKVVHLLAKEEEIVAAK 442 (1074)
Q Consensus 407 vl~~~~g~d~d~~--~l~~~v~~li~~l~~~~e~~~~~ 442 (1074)
|++ ++|.||||. .++++|+++++.++++++++++.
T Consensus 303 vl~-~~~~Dpd~~~~~l~~~v~~l~d~l~~~~~~~~~~ 339 (386)
T 2bnx_A 303 VLH-KNGTDPDFKCRHLQIDIERLVDQMIDKTKVEKSE 339 (386)
T ss_dssp HTC-GGGCCCCTTCSCCCCCCTTTC-----CTHHHHHH
T ss_pred Hhc-cCCCCCCcccccccchHHHHHHHHhhhhHHHHHH
Confidence 999 789999997 57899999999999877655443
No 8
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=100.00 E-value=2.5e-48 Score=419.90 Aligned_cols=224 Identities=30% Similarity=0.517 Sum_probs=205.4
Q ss_pred ChHHHHHHHhcccCCCCCCCChhhhhhHHHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccC------Ccc
Q psy8075 98 NPEQYIEQLRNFKSSPLTEHDDTEIKSRTRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSG------QTS 171 (1074)
Q Consensus 98 ~P~~yi~~L~~~~~~~~~~~~~~~~~~~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~------~~~ 171 (1074)
+|+|||++|++..+ .+.++++|++|+|+|||+|++||++| ..+|+++|+++|.++..... +..
T Consensus 1 ~P~~yi~~L~~~~~----------~~~~~~~L~~L~v~Lrt~~~~Wv~~F-~~~Gl~~L~~~L~~~~~~~~~~~~~~~~~ 69 (233)
T 2f31_A 1 SAMMYIQELRSGLR----------DMHLLSCLESLRVSLNNNPVSWVQTF-GAEGLASLLDILKRLHDEKEETSGNYDSR 69 (233)
T ss_dssp CHHHHHHHHTTTCC----------HHHHHHHHHHHHHHHHHSCHHHHHHH-HHHHHHHHHHHHHHHHTCC-----CCHHH
T ss_pred CHHHHHHHHHhccc----------hHHHHHHHHHHhHhHhcCCcHHHHHH-HHhHHHHHHHHHHHHHhcccccchhhhHH
Confidence 59999999987542 23568899999999999999999999 58999999999998864332 345
Q ss_pred hhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHHHHHhccCC--c-hhHHHHHHhhHHHHccc
Q psy8075 172 LHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEILGAVCLIPG--G-HKKVLDAMSHYQRFCNE 248 (1074)
Q Consensus 172 ~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elLaavc~~~~--G-h~~VL~Al~~~~~~~~e 248 (1074)
++++||+|||||||+++|++.|++|+.+|..|+.||++++++||++|+|||+|+|++++ | |++||+||++|+. ++|
T Consensus 70 ~~~~~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~~~~~r~~~leLL~~lc~~~~~~G~~~~VL~Al~~~~~-~~e 148 (233)
T 2f31_A 70 NQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAE-MDE 148 (233)
T ss_dssp HHHHHHHHHHHHTSSHHHHHHHHTSSSHHHHHHTTCCTTSHHHHHHHHHHHHHHHTCSSSSCHHHHHHHHHHHHHH-HHT
T ss_pred HHHHHHHHHHHHhCChHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHH-hCC
Confidence 78999999999999999999999999999999999999999999999999999999986 9 9999999999986 589
Q ss_pred ccchHHHHHHhhhccCCccchhHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHhccCchHHHHHHH
Q psy8075 249 RSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVLSYGPGQHSLEFRLHLRYEVIMLGIQPIIDKLRTHENETLDRHLD 328 (1074)
Q Consensus 249 ~~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN~lv~~~~~~~dl~~R~~lR~Ef~~~GL~~~l~~Lr~~~~~~L~~qi~ 328 (1074)
+.||++||++|... ++++|+++||+|||+||++ ++|+++|+|||+||.++||+++|++|+..++++|++||+
T Consensus 149 ~~RF~~lv~~l~~~-----~~~e~~~~~m~lIN~li~~---~~dl~~R~~lR~ef~~~Gl~~il~~l~~~~~~~L~~Qi~ 220 (233)
T 2f31_A 149 VERFQPLLDGLKSG-----TSIALKVGCLQLINALITP---AEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLC 220 (233)
T ss_dssp SCTTHHHHHTTSTT-----SCHHHHHHHHHHHHHHHTT---CCCHHHHHHHHHHHHHTTHHHHHHHHHHCCCHHHHHHHH
T ss_pred cchHHHHHHHHhcC-----ChHHHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHHHCChHHHHHHHhccCCHHHHHHHH
Confidence 99999999999642 4689999999999999997 689999999999999999999999999999999999999
Q ss_pred HHHHhHHhhHHHH
Q psy8075 329 FFEMLRHEDESEL 341 (1074)
Q Consensus 329 ~fe~~~~eDe~el 341 (1074)
+|++.+++|++||
T Consensus 221 ~fe~~~~eD~~el 233 (233)
T 2f31_A 221 VFDEQGDEDFFDL 233 (233)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHhCHhhC
Confidence 9999999999985
No 9
>4dvg_B Diaphanous protein; cytoskeleton, armadillo repeat, GTPase-binding domain, nucle binding, signaling protein, lipoprotein; HET: GSP; 2.60A {Entamoeba histolytica}
Probab=99.67 E-value=8e-15 Score=145.65 Aligned_cols=302 Identities=17% Similarity=0.377 Sum_probs=204.1
Q ss_pred CCCChhhHHHHHHHHHHhcCCChhHHHhhcCCChHHHHHHHHhhcccccC-----------CC--CCCCChHHHHHHHhc
Q psy8075 42 PIPPTNELNTMFEELVEELDLTAPNKAAMLSLPDEKKWQIYCSRKMDQTS-----------TT--DAPDNPEQYIEQLRN 108 (1074)
Q Consensus 42 ~~P~~~ei~~~F~~ll~~~nl~~~~~~~m~~~~~ekKw~li~~~~~~~~~-----------~~--~~~~~P~~yi~~L~~ 108 (1074)
.||+++.|.+.|.-+..+|.+.... +...|. .|.|++.-.+.|.+ .. .+..+|.|..+.|++
T Consensus 3 amppeevvqqkfaivakemkidnpe---litipn--qwklvqeyekkqkkdiriqlnaqktgnwrnaitdpkyladllkt 77 (353)
T 4dvg_B 3 AMPPEEVVQQKFAIVAKEMKIDNPE---LITIPN--QWKLVQEYEKKQKKDIRIQLNAQKTGNWRNAITDPKYLADLLKT 77 (353)
T ss_dssp -----CCCCGGGHHHHHHTTCSCGG---GSCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHTTSHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCcc---eEeccc--HHHHHHHHHHhhccceEEEecchhcCChhhccCChHHHHHHHhc
Confidence 5899999999999999999887543 334443 45554322211100 00 124578888888875
Q ss_pred ccCCCCCCCChhhhhhHHHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHH-hcccccCCcchhHH--HHHHHHHHhc
Q psy8075 109 FKSSPLTEHDDTEIKSRTRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLK-NLDHYSGQTSLHSS--IIGCIKALMN 185 (1074)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~-~~~~~~~~~~~~~~--~l~ClkalmN 185 (1074)
.- . ..+|...-|-.|+.+++|++.|+..||+.-|+.+.. ++..+.+...+..+ |-..||-+.-
T Consensus 78 rd-------d-------mdllnemvvvfrsssvsfiktfvsvgglanlmaiykkkieaensntaideerkccevlryvfa 143 (353)
T 4dvg_B 78 RD-------D-------MDLLNEMVVVFRSSSVSFIKTFVSVGGLANLMAIYKKKIEAENSNTAIDEERKCCEVLRYVFA 143 (353)
T ss_dssp CC-------C-------HHHHHHHHHHHHHSCHHHHHHHHHTSTHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTT
T ss_pred cc-------h-------HHHhhhheEEEeccchhHHHHHhhhccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHh
Confidence 32 1 578999999999999999999999999999998765 35555444444333 4333777777
Q ss_pred ChhhHHHhhcCccHHHHHHHhhcCCChhhHHH---HHHHHHHHhcc---------CCchhHHHHHHhhHHHHcccccchH
Q psy8075 186 NSTGRSHVLGYPGAIDIIAQSLSTENIKTKIA---VLEILGAVCLI---------PGGHKKVLDAMSHYQRFCNERSRFQ 253 (1074)
Q Consensus 186 ~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~---v~elLaavc~~---------~~Gh~~VL~Al~~~~~~~~e~~RF~ 253 (1074)
....--.++.-..++..+...++|.++.--.+ .+||-..-+++ -||.-.|+.||+++-..--+...|-
T Consensus 144 eedatvalieidggvelllkgmnskritpdnqldilleitltssmvehpsqeglylggdvcvmnafsnlvsegvdmkkfl 223 (353)
T 4dvg_B 144 EEDATVALIEIDGGVELLLKGMNSKRITPDNQLDILLEITLTSSMVEHPSQEGLYLGGDVCVMNAFSNLVSEGVDMKKFL 223 (353)
T ss_dssp SHHHHHHHHTSTTHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHCSBCTTSTTCBCCHHHHHHHHHHHHHHTTSCSSTTH
T ss_pred cccceEEEEEecccHHHHhcccccCcCCCccccceeeeEeehhhhhcCccccceeecCceeeehhhHHHHhccccHHHHH
Confidence 76666677777888899999999987654433 23333333333 2688899999999976666778899
Q ss_pred HHHHHhhhccCCccchhHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHhccCc---hHHHHHHHHH
Q psy8075 254 GIVNDLDKSTGIYRTDVSIKTALMSFLNAVLSYGPGQHSLEFRLHLRYEVIMLGIQPIIDKLRTHEN---ETLDRHLDFF 330 (1074)
Q Consensus 254 ~lv~~l~~~~~~~~~~~~~~~a~m~lIN~lv~~~~~~~dl~~R~~lR~Ef~~~GL~~~l~~Lr~~~~---~~L~~qi~~f 330 (1074)
++...+.++ .+..++.|.+.+||-+|+. +.++.|+..|+-|+..||..-++.|++.+. +.+..-|+-|
T Consensus 224 sffslfsks-----ksekfkhaslvlinnlidq----pelehrmdvrnsfieiglvnelenmkntewmkidkikdsindf 294 (353)
T 4dvg_B 224 SFFSLFSKS-----KSEKFKHASLVLINNLIDQ----PELEHRMDVRNSFIEIGLVNELENMKNTEWMKIDKIKDSINDF 294 (353)
T ss_dssp HHHHHHHHC-----CCHHHHHHHHHHHHHHHCC----SSHHHHHHHHHHHHTTTHHHHHHHHHTSGGGGSHHHHHHHHHH
T ss_pred HHHHHHhhh-----hhhhcccceeehhhccccc----hhhHhhhhhhhhheeeehhhHhhhccCccceehhhHHhhHHHH
Confidence 999888765 3568999999999999985 469999999999999999999999999774 5666777777
Q ss_pred HHhHHhhHHHHHhhhcCC--ccCCCCHHHHHHHHHHHhcCCCC
Q psy8075 331 EMLRHEDESELARKYETD--HIETKSATSMFNILRRKLGHTAA 371 (1074)
Q Consensus 331 e~~~~eDe~el~~~~~~~--~~d~~~~~~v~~~l~~~~~~t~a 371 (1074)
-...++|..|+..||++. .+|+.+...+-+.+.++...-.+
T Consensus 295 fdsweedkkevesrfddlkqvvdfestkslnnyvteqmdkfec 337 (353)
T 4dvg_B 295 FDSWEEDKKEVESRFDDLKQVVDFESTKSLNNYVTEQMDKFEC 337 (353)
T ss_dssp HHHHHHHHHHHHHHHTTC-------------------------
T ss_pred HhhHHhhHHHHHHhhhhHHHHhcccccchHHHHHHHHhhhhhh
Confidence 778899999999999863 45776655555555444433333
No 10
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=99.62 E-value=2.5e-14 Score=157.91 Aligned_cols=210 Identities=16% Similarity=0.191 Sum_probs=172.7
Q ss_pred hHHHHHHHhcccCCCCCCCChhhhhhHHHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHH
Q psy8075 99 PEQYIEQLRNFKSSPLTEHDDTEIKSRTRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIG 178 (1074)
Q Consensus 99 P~~yi~~L~~~~~~~~~~~~~~~~~~~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ 178 (1074)
++..|++|.+. ........|-+|+.-+- ....|++|||+.+|+.+|+.+...- +...+..+++
T Consensus 120 a~~iiekL~~~-----------~~~~lr~aLfsLk~~~q-~D~~Fa~EFI~~~GL~~Li~vi~~~-----~gN~q~Y~L~ 182 (339)
T 3dad_A 120 VNAILEKLYSS-----------SGPELRRSLFSLKQIFQ-EDKDLVPEFVHSEGLSCLIRVGAAA-----DHNYQSYILR 182 (339)
T ss_dssp HHHHHHHHHHC-----------CHHHHHHHHHHHHHHHH-TCTTHHHHHHHTTHHHHHHHHHTTS-----CHHHHHHHHH
T ss_pred HHHHHHHHhcC-----------CcHHHHHHHHHHHHHhh-cchHHHHHHHHhccHHHHHHHHHhc-----ChHHHHHHHH
Confidence 46666777641 12345677888876554 5679999999999999999997653 4456788999
Q ss_pred HHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHHHHHhccC-CchhHHHHHHhhHHHHcccccchHHHHH
Q psy8075 179 CIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEILGAVCLIP-GGHKKVLDAMSHYQRFCNERSRFQGIVN 257 (1074)
Q Consensus 179 ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elLaavc~~~-~Gh~~VL~Al~~~~~~~~e~~RF~~lv~ 257 (1074)
+|..||.+-+|++.|++|++.|.+|+..+++....+-..+++||-.+|.+. +|+..|.+|++.+... ....+|..+|.
T Consensus 183 AL~~LM~~v~Gm~gvvs~~~fI~~lyslv~s~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~-~~~~p~~~Lv~ 261 (339)
T 3dad_A 183 ALGQLMLFVDGMLGVVAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVAST-TGAPPWANLVS 261 (339)
T ss_dssp HHHHHTTSHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH-HCCCTTHHHHH
T ss_pred HHHHHHhccccccchhCCHHHHHHHHHHHcCccHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhc-cCCCcHHHHHH
Confidence 999999999999999999999999999999888888899999999999874 6899999999988643 34567999999
Q ss_pred HhhhccCCccchhHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCcHHHHHH-Hhcc-CchHHHHHHHHHHH
Q psy8075 258 DLDKSTGIYRTDVSIKTALMSFLNAVLSYGPGQHSLEFRLHLRYEVIMLGIQPIIDK-LRTH-ENETLDRHLDFFEM 332 (1074)
Q Consensus 258 ~l~~~~~~~~~~~~~~~a~m~lIN~lv~~~~~~~dl~~R~~lR~Ef~~~GL~~~l~~-Lr~~-~~~~L~~qi~~fe~ 332 (1074)
.|....+ .+.++++.+|.|||+++..+ +|-+-|.++...+...|+..++.+ |... .+.+|.+|+.+||.
T Consensus 262 ~L~~~~~---~D~elq~~amtLIN~lL~~a---pd~d~~~di~d~Le~~gi~~~i~r~l~~~~~~~~l~~Ql~iyE~ 332 (339)
T 3dad_A 262 ILEEKNG---ADPELLVYTVTLINKTLAAL---PDQDSFYDVTDALEQQGMEALVQRHLGTAGTDVDLRTQLVLYEN 332 (339)
T ss_dssp HHTTTTS---CCHHHHHHHHHHHHHHHHHC---SSHHHHHHHHHHHHHTTHHHHHHHHHSCTTSCHHHHHHHHHHHH
T ss_pred HHhccCC---CCHHHHHHHHHHHHHHHhcC---CChhHHHHHHHHHHHccHHHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 9964322 36788999999999999863 455668899999999999998887 6665 58899999999986
No 11
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=97.03 E-value=9.6e-05 Score=86.26 Aligned_cols=8 Identities=13% Similarity=0.089 Sum_probs=3.3
Q ss_pred HHHHHHHh
Q psy8075 277 MSFLNAVL 284 (1074)
Q Consensus 277 m~lIN~lv 284 (1074)
|.+.++.|
T Consensus 216 i~~~y~~I 223 (448)
T 2z73_A 216 IFFCYFNI 223 (448)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33444444
No 12
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=94.89 E-value=0.76 Score=48.16 Aligned_cols=182 Identities=18% Similarity=0.185 Sum_probs=112.9
Q ss_pred hHHHHHHHhcccCCCCCCCChhhhhhHHHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHH
Q psy8075 99 PEQYIEQLRNFKSSPLTEHDDTEIKSRTRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIG 178 (1074)
Q Consensus 99 P~~yi~~L~~~~~~~~~~~~~~~~~~~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ 178 (1074)
=.+|+..|.+.. . +.....+..|+..+.. .-...+.+++.+|+..|+.+|..- +..++..++.
T Consensus 14 ~~~~~~~L~s~~------~-----~~~~~a~~~L~~~l~~-~~~~~~~~~~~g~i~~L~~lL~~~-----~~~v~~~a~~ 76 (252)
T 4db8_A 14 LPQMTQQLNSDD------M-----QEQLSATRKFSQILSD-GNEQIQAVIDAGALPALVQLLSSP-----NEQILQEALW 76 (252)
T ss_dssp HHHHHHHHHSSC------S-----SHHHHHHHHHHHHHHH-HHHHHHHHHHTTHHHHHHHGGGCS-----CHHHHHHHHH
T ss_pred HHHHHHHHcCCC------H-----HHHHHHHHHHHHHHcC-CCchHHHHHHcCcHHHHHHHHcCC-----CHHHHHHHHH
Confidence 366677776421 1 2345566666555544 446778899999999999998742 2456778899
Q ss_pred HHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHHHHHhccCCch-hHHHHHHhhHHHHcccccchHHHHH
Q psy8075 179 CIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEILGAVCLIPGGH-KKVLDAMSHYQRFCNERSRFQGIVN 257 (1074)
Q Consensus 179 ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elLaavc~~~~Gh-~~VL~Al~~~~~~~~e~~RF~~lv~ 257 (1074)
||..|..........+....++..|...|.+++..++..++..|+.+|..+... ..+.++ +-...+++
T Consensus 77 ~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~-----------~~i~~L~~ 145 (252)
T 4db8_A 77 ALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDA-----------GALPALVQ 145 (252)
T ss_dssp HHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT-----------THHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHC-----------CCHHHHHH
Confidence 999998743334444455578999999999999999999999999998865433 222221 22456676
Q ss_pred HhhhccCCccchhHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHhccCchHH
Q psy8075 258 DLDKSTGIYRTDVSIKTALMSFLNAVLSYGPGQHSLEFRLHLRYEVIMLGIQPIIDKLRTHENETL 323 (1074)
Q Consensus 258 ~l~~~~~~~~~~~~~~~a~m~lIN~lv~~~~~~~dl~~R~~lR~Ef~~~GL~~~l~~Lr~~~~~~L 323 (1074)
.|... +..++..++..+-.|... .+ + .+..+...|+.+.|-.+-...++.+
T Consensus 146 lL~~~------~~~v~~~a~~~L~~l~~~---~~--~----~~~~~~~~~~i~~L~~ll~~~~~~v 196 (252)
T 4db8_A 146 LLSSP------NEQILQEALWALSNIASG---GN--E----QIQAVIDAGALPALVQLLSSPNEQI 196 (252)
T ss_dssp GGGCS------CHHHHHHHHHHHHHHTTS---CH--H----HHHHHHHTTCHHHHHHGGGCSSHHH
T ss_pred HHhCC------CHHHHHHHHHHHHHHHcC---Ch--H----HHHHHHHCCCHHHHHHHHCCCCHHH
Confidence 66432 344444444444444432 11 1 2344556777665555443344433
No 13
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=94.12 E-value=0.47 Score=57.12 Aligned_cols=221 Identities=13% Similarity=0.152 Sum_probs=137.7
Q ss_pred CCCCh-hhHHHHHHHHHHhcCCChhHHHhhcCCC-hHHHHHH-HHhhcccccCCCCCCCChHHHHHHHhcccCCCCCCCC
Q psy8075 42 PIPPT-NELNTMFEELVEELDLTAPNKAAMLSLP-DEKKWQI-YCSRKMDQTSTTDAPDNPEQYIEQLRNFKSSPLTEHD 118 (1074)
Q Consensus 42 ~~P~~-~ei~~~F~~ll~~~nl~~~~~~~m~~~~-~ekKw~l-i~~~~~~~~~~~~~~~~P~~yi~~L~~~~~~~~~~~~ 118 (1074)
+.++. +.|+.+.+++-. -.+.++.|.+++.+. ..|||.. +-.+ --..+|.-|++.. +
T Consensus 15 ~~qs~~etI~~L~~Rl~~-~tl~eDRR~Av~~Lk~~sk~y~~~Vg~~------------~l~~li~~L~~d~-------~ 74 (651)
T 3grl_A 15 PQHTEAETIQKLCDRVAS-STLLDDRRNAVRALKSLSKKYRLEVGIQ------------AMEHLIHVLQTDR-------S 74 (651)
T ss_dssp ---CHHHHHHHHHHHHHH-CCSHHHHHHHHHHHHHTTTTTTTHHHHH------------THHHHHHHHHSCT-------T
T ss_pred CCCChhhHHHHHHHHHhh-ccchhHHHHHHHHHHHHHHHhHHHhhhh------------hHHHHHHHHhccc-------c
Confidence 44555 888888888744 567788887766532 3355532 2111 1235566665432 1
Q ss_pred hhhhhhHHHHHHHHhhhhccCch---------------h-hHHHhh-hcCcHHHHHHHHHhcccccCCcchhHHHHHHHH
Q psy8075 119 DTEIKSRTRILDSLRTALRTQPH---------------S-FVLRFI-ECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIK 181 (1074)
Q Consensus 119 ~~~~~~~~~~l~~L~v~Lrt~~~---------------~-Wv~~Fi-~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~Clk 181 (1074)
.++....+|.-|-..+...+- . +...|+ +.+|+..|++.|.. .+..+.+..|+||.
T Consensus 75 --D~e~v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~-----~df~vR~~alqlL~ 147 (651)
T 3grl_A 75 --DSEIIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEE-----FDFHVRWPGVKLLT 147 (651)
T ss_dssp --CHHHHHHHHHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHHTTC-----CCHHHHHHHHHHHH
T ss_pred --cHHHHHHHHHHHHHHhCCCCcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcC-----ccHHHHHHHHHHHH
Confidence 223344455555444443321 2 345777 56799999999864 22334567899999
Q ss_pred HHhcChhh--HHHhhcCccHHHHHHHhhcCCChhhHHHHHHHHHHHhccCCchhHHHHHHhhHHHHcccccchHHHHHHh
Q psy8075 182 ALMNNSTG--RSHVLGYPGAIDIIAQSLSTENIKTKIAVLEILGAVCLIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDL 259 (1074)
Q Consensus 182 almN~~~G--~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elLaavc~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l 259 (1074)
+|+.+... -+.|+..|.+|..|...|+.++-..|..++-+|++++-- ...++.+-.|. .=|+.+++.+
T Consensus 148 ~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~----n~~iQklVAFE------naFe~Lf~Ii 217 (651)
T 3grl_A 148 SLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRS----NGAIQKIVAFE------NAFERLLDII 217 (651)
T ss_dssp HHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTT----CHHHHHHHHHT------THHHHHHHHH
T ss_pred HHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcC----CHHHHHHHHHh------ccHHHHHHHH
Confidence 99977665 456778999999999999999999999999999988873 22333333331 2277888877
Q ss_pred hhccCCccchhHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCcHH
Q psy8075 260 DKSTGIYRTDVSIKTALMSFLNAVLSYGPGQHSLEFRLHLRYEVIMLGIQP 310 (1074)
Q Consensus 260 ~~~~~~~~~~~~~~~a~m~lIN~lv~~~~~~~dl~~R~~lR~Ef~~~GL~~ 310 (1074)
...++. +.-....-||.+++.|+.. + ..-++-|...|.-.
T Consensus 218 ~~Eg~~--~Ggivv~DCL~ll~nLLr~-----N----~sNQ~~FrEt~~i~ 257 (651)
T 3grl_A 218 TEEGNS--DGGIVVEDCLILLQNLLKN-----N----NSNQNFFKEGSYIQ 257 (651)
T ss_dssp HHHTGG--GSHHHHHHHHHHHHHHHTT-----C----HHHHHHHHHTTCGG
T ss_pred HhcCCC--ccchhHHHHHHHHHHHHhc-----C----HHHHHHHHHcCCHH
Confidence 654331 1222345799999999964 1 23466677666543
No 14
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=93.29 E-value=1.4 Score=44.80 Aligned_cols=166 Identities=17% Similarity=0.215 Sum_probs=105.8
Q ss_pred HHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHh-cChhhHHHhhcCccHHHHHH
Q psy8075 126 TRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALM-NNSTGRSHVLGYPGAIDIIA 204 (1074)
Q Consensus 126 ~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~Clkalm-N~~~G~~~vl~~~~~i~~la 204 (1074)
...+..|...-+ ..-.....|++.+|+..|+++|.. .+..+...++.||..|. ++......++ ....+..|.
T Consensus 30 ~~a~~~L~~l~~-~~~~~~~~i~~~g~i~~L~~lL~~-----~~~~v~~~a~~~L~~l~~~~~~~~~~i~-~~g~i~~L~ 102 (210)
T 4db6_A 30 QSALRKLSQIAS-GGNEQIQAVIDAGALPALVQLLSS-----PNEQILQEALWALSNIASGGNEQIQAVI-DAGALPALV 102 (210)
T ss_dssp HHHHHHHHHHHT-SCHHHHHHHHHTTHHHHHHHHTTC-----SCHHHHHHHHHHHHHHTTSCHHHHHHHH-HTTCHHHHH
T ss_pred HHHHHHHHHHHc-CCHHHHHHHHHcCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHhcCCcHHHHHHH-HCCCHHHHH
Confidence 344444444332 334566788899999999999864 23456777888898887 4555555554 557899999
Q ss_pred HhhcCCChhhHHHHHHHHHHHhccCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHHHH-HHHHHHHHH
Q psy8075 205 QSLSTENIKTKIAVLEILGAVCLIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIKT-ALMSFLNAV 283 (1074)
Q Consensus 205 ~sL~s~~~~tr~~v~elLaavc~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~~-a~m~lIN~l 283 (1074)
..|.+++..++..++..|..+|.....+ .+++- +.+-+..+++.+... +...+. ++..|-|..
T Consensus 103 ~lL~~~~~~v~~~a~~~L~~l~~~~~~~---~~~~~-------~~~~i~~L~~ll~~~------~~~v~~~a~~aL~~l~ 166 (210)
T 4db6_A 103 QLLSSPNEQILQEALWALSNIASGGNEQ---IQAVI-------DAGALPALVQLLSSP------NEQILQEALWALSNIA 166 (210)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHTTSCHHH---HHHHH-------HTTHHHHHHHHTTCS------CHHHHHHHHHHHHHHH
T ss_pred HHHcCCcHHHHHHHHHHHHHHHcCCHHH---HHHHH-------HcCcHHHHHHHHcCC------CHHHHHHHHHHHHHHH
Confidence 9999999999999999999998743222 11111 112355677776532 344444 444455544
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHhccCchHHH
Q psy8075 284 LSYGPGQHSLEFRLHLRYEVIMLGIQPIIDKLRTHENETLD 324 (1074)
Q Consensus 284 v~~~~~~~dl~~R~~lR~Ef~~~GL~~~l~~Lr~~~~~~L~ 324 (1074)
-++ + ..+..+...|..+.|..+-...++.+.
T Consensus 167 ~~~----~------~~~~~~~~~g~i~~L~~ll~~~~~~v~ 197 (210)
T 4db6_A 167 SGG----N------EQKQAVKEAGALEKLEQLQSHENEKIQ 197 (210)
T ss_dssp TSC----H------HHHHHHHHTTHHHHHHHGGGCSCHHHH
T ss_pred cCC----c------HHHHHHHHCCCHHHHHHHHhCCCHHHH
Confidence 321 1 245677888888777776655665553
No 15
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=93.14 E-value=1.6 Score=45.19 Aligned_cols=167 Identities=12% Similarity=0.184 Sum_probs=107.1
Q ss_pred HHHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHH
Q psy8075 125 RTRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIA 204 (1074)
Q Consensus 125 ~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la 204 (1074)
....+..|....+..+ .....|++.+|+..|+.+|.. .+..++..++.||..|..........+.....+..|.
T Consensus 19 ~~~a~~~L~~l~~~~~-~~~~~~~~~g~i~~L~~ll~~-----~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~ 92 (252)
T 4hxt_A 19 QKEAARDLAEIASGPA-SAIKAIVDAGGVEVLVKLLTS-----TDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLV 92 (252)
T ss_dssp HHHHHHHHHHHHTSCH-HHHHHHHHTTHHHHHHHHTTC-----SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHhcCCc-HHHHHHHHCCCHHHHHHHHhC-----CCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHH
Confidence 3455556655555554 577888889999999999864 2345678889999999887444444455667899999
Q ss_pred HhhcCCChhhHHHHHHHHHHHhcc-CCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHHHHHHHHHHHHH
Q psy8075 205 QSLSTENIKTKIAVLEILGAVCLI-PGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAV 283 (1074)
Q Consensus 205 ~sL~s~~~~tr~~v~elLaavc~~-~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN~l 283 (1074)
..|.+++..++..++..|+.+|.. +.....+.+ .+-+..+++.+... +..++..++..+-.|
T Consensus 93 ~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~-----------~~~i~~L~~~l~~~------~~~~~~~a~~~L~~l 155 (252)
T 4hxt_A 93 KLLTSTDSEVQKEAARALANIASGPDEAIKAIVD-----------AGGVEVLVKLLTST------DSEVQKEAARALANI 155 (252)
T ss_dssp HHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHH-----------TTHHHHHHHHTTCS------CHHHHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHH-----------CCCHHHHHHHHcCC------CHHHHHHHHHHHHHH
Confidence 999999999999999999999953 322222221 12345677666532 344555555545445
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHhccCchHH
Q psy8075 284 LSYGPGQHSLEFRLHLRYEVIMLGIQPIIDKLRTHENETL 323 (1074)
Q Consensus 284 v~~~~~~~dl~~R~~lR~Ef~~~GL~~~l~~Lr~~~~~~L 323 (1074)
... .+ + .+..+...|..+.+-.+-...++.+
T Consensus 156 ~~~---~~--~----~~~~~~~~~~i~~L~~ll~~~~~~v 186 (252)
T 4hxt_A 156 ASG---PD--E----AIKAIVDAGGVEVLVKLLTSTDSEV 186 (252)
T ss_dssp TTS---CH--H----HHHHHHHTTHHHHHHHHTTCSCHHH
T ss_pred HcC---CH--H----HHHHHHHCcCHHHHHHHHCCCCHHH
Confidence 432 11 1 2345666777766665544444433
No 16
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=92.90 E-value=0.1 Score=60.71 Aligned_cols=11 Identities=36% Similarity=0.446 Sum_probs=6.1
Q ss_pred HHHHHHH-HHHh
Q psy8075 274 TALMSFL-NAVL 284 (1074)
Q Consensus 274 ~a~m~lI-N~lv 284 (1074)
-+++.|| |-+.
T Consensus 274 e~A~~fl~~~l~ 285 (449)
T 3iot_A 274 ELAKEFLENYLL 285 (449)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHHHhc
Confidence 3456666 4555
No 17
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=92.70 E-value=1.1 Score=53.17 Aligned_cols=166 Identities=13% Similarity=0.148 Sum_probs=97.1
Q ss_pred HhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHHHHH
Q psy8075 146 RFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEILGAV 225 (1074)
Q Consensus 146 ~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elLaav 225 (1074)
.+++.+++..|+.+|.. .+..++..+++||..|.-........+-+..++..|...|.+++..++..++-.|+-+
T Consensus 288 ~v~~~g~i~~Lv~lL~~-----~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL~nl 362 (529)
T 3tpo_A 288 MVVKKGVVPQLVKLLGA-----TELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNI 362 (529)
T ss_dssp HHHTTTCHHHHHHHHTC-----SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHhccchHHHHHHhcC-----CChhHHHHHHHHHHHHHccchHHHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 34456778888887753 2334566778888877654444444445566788888889999999999998888877
Q ss_pred hccC----------CchhH---------------HHHHHhhHHHHcc--------cccchHHHHHHhhhccCCccchhHH
Q psy8075 226 CLIP----------GGHKK---------------VLDAMSHYQRFCN--------ERSRFQGIVNDLDKSTGIYRTDVSI 272 (1074)
Q Consensus 226 c~~~----------~Gh~~---------------VL~Al~~~~~~~~--------e~~RF~~lv~~l~~~~~~~~~~~~~ 272 (1074)
|.-. ++... +.-|+.++..... +.+=...|++.|.. .+.++
T Consensus 363 ~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g~i~~L~~LL~~------~d~~i 436 (529)
T 3tpo_A 363 TAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSA------KDTKI 436 (529)
T ss_dssp HTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGC------SCHHH
T ss_pred hcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCcCHHHHHHHhcC------CCHHH
Confidence 7521 11111 1222333321111 11223344444432 23445
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHhccCchHHHH
Q psy8075 273 KTALMSFLNAVLSYGPGQHSLEFRLHLRYEVIMLGIQPIIDKLRTHENETLDR 325 (1074)
Q Consensus 273 ~~a~m~lIN~lv~~~~~~~dl~~R~~lR~Ef~~~GL~~~l~~Lr~~~~~~L~~ 325 (1074)
...++..|..|+..+. .+..--.++.-|..+|..+.|+.|..++++++-.
T Consensus 437 ~~~~L~aL~nil~~~~---~~~~~~~~~~~iee~ggl~~ie~Lq~~~n~~i~~ 486 (529)
T 3tpo_A 437 IQVILDAISNIFQAAE---KLGETEKLSIMIEECGGLDKIEALQRHENESVYK 486 (529)
T ss_dssp HHHHHHHHHHHHHHHH---TTTCHHHHHHHHHHTTCHHHHTGGGGCSSHHHHH
T ss_pred HHHHHHHHHHHHHHhH---hccChHHHHHHHHHCCcHHHHHHHHcCCCHHHHH
Confidence 5555555555554321 1111223556788999999999999999887743
No 18
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=91.91 E-value=0.03 Score=65.39 Aligned_cols=9 Identities=0% Similarity=0.036 Sum_probs=3.6
Q ss_pred HHHHHhhHH
Q psy8075 235 VLDAMSHYQ 243 (1074)
Q Consensus 235 VL~Al~~~~ 243 (1074)
+.+||+.++
T Consensus 188 ~~~al~~~~ 196 (449)
T 3iot_A 188 AKAGLTFLV 196 (449)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 334444433
No 19
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=91.75 E-value=1.1 Score=53.06 Aligned_cols=170 Identities=13% Similarity=0.136 Sum_probs=97.5
Q ss_pred hhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHH
Q psy8075 142 SFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEI 221 (1074)
Q Consensus 142 ~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~el 221 (1074)
...+.+++.+++..|+.+|.. .+..++..+++||..|..........+-...++..|...|.+++..++..++-.
T Consensus 265 ~~~~~i~~~g~i~~Lv~lL~~-----~~~~v~~~al~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~a 339 (510)
T 3ul1_B 265 ERIEMVVKKGVVPQLVKLLGA-----TELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWT 339 (510)
T ss_dssp HHHHHHHTTTCHHHHHHHHTC-----SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGCC-CTTCSSHHHHHHHHHH
T ss_pred hhHHHHHhcccchhhhhhhcC-----CChhhhhHHHHHHHHhhcCCHHHHHHHhhccchHHHHHHhcCCCHHHHHHHHHH
Confidence 344445566788888888763 233456677778877765444444444455567777777888888888888888
Q ss_pred HHHHhccC----------CchhH---------------HHHHHhhHHHHc--------ccccchHHHHHHhhhccCCccc
Q psy8075 222 LGAVCLIP----------GGHKK---------------VLDAMSHYQRFC--------NERSRFQGIVNDLDKSTGIYRT 268 (1074)
Q Consensus 222 Laavc~~~----------~Gh~~---------------VL~Al~~~~~~~--------~e~~RF~~lv~~l~~~~~~~~~ 268 (1074)
|+-+|... ++... +..|+.++.... -+.+=...|++.|.. .
T Consensus 340 L~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g~i~~L~~LL~~------~ 413 (510)
T 3ul1_B 340 MSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSA------K 413 (510)
T ss_dssp HHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHHGGGC------S
T ss_pred HHHHHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcC------C
Confidence 88776421 11111 122233322111 011223444444432 2
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHhccCchHHHH
Q psy8075 269 DVSIKTALMSFLNAVLSYGPGQHSLEFRLHLRYEVIMLGIQPIIDKLRTHENETLDR 325 (1074)
Q Consensus 269 ~~~~~~a~m~lIN~lv~~~~~~~dl~~R~~lR~Ef~~~GL~~~l~~Lr~~~~~~L~~ 325 (1074)
+.++...++..|..|+..+ +.+...-.++.-|..+|..+.|+.|..++++++-.
T Consensus 414 d~~i~~~~L~aL~nil~~~---~~~~~~~~~~~~iee~ggl~~ie~Lq~~~n~~i~~ 467 (510)
T 3ul1_B 414 DTKIIQVILDAISNIFQAA---EKLGETEKLSIMIEECGGLDKIEALQRHENESVYK 467 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHH---HTTTCHHHHHHHHHHTTHHHHHHHGGGCSSHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHh---HhccchHHHHHHHHHcCcHHHHHHHHcCCCHHHHH
Confidence 3455555555555555432 11112234566788999999999999999887743
No 20
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=91.51 E-value=2.9 Score=43.18 Aligned_cols=152 Identities=12% Similarity=0.215 Sum_probs=99.2
Q ss_pred hhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHh-cChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHH
Q psy8075 141 HSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALM-NNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVL 219 (1074)
Q Consensus 141 ~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~Clkalm-N~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~ 219 (1074)
-.....+++.+|+..|+.+|.. .+..+...++.||..|. .+......++. ...+..|...|.+++..++..++
T Consensus 76 ~~~~~~~~~~~~i~~l~~ll~~-----~~~~v~~~a~~~L~~l~~~~~~~~~~~~~-~~~i~~L~~~l~~~~~~~~~~a~ 149 (252)
T 4hxt_A 76 DEAIKAIVDAGGVEVLVKLLTS-----TDSEVQKEAARALANIASGPDEAIKAIVD-AGGVEVLVKLLTSTDSEVQKEAA 149 (252)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTC-----SSHHHHHHHHHHHHHHTTSCHHHHHHHHH-TTHHHHHHHHTTCSCHHHHHHHH
T ss_pred hHHHHHHHHCCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHHcCCHHHHHHHHH-CCCHHHHHHHHcCCCHHHHHHHH
Confidence 5677778888999999999873 33456778899999999 55555555554 67899999999999999999999
Q ss_pred HHHHHHhccCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHHHHHHHHHHHHHhcCCCCCCCHHHHHHH
Q psy8075 220 EILGAVCLIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVLSYGPGQHSLEFRLHL 299 (1074)
Q Consensus 220 elLaavc~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN~lv~~~~~~~dl~~R~~l 299 (1074)
..|+.+|....+.. +.+- +.+-+..++..+.. .+...+..++..+-.|... +- ..
T Consensus 150 ~~L~~l~~~~~~~~---~~~~-------~~~~i~~L~~ll~~------~~~~v~~~a~~~L~~l~~~-----~~----~~ 204 (252)
T 4hxt_A 150 RALANIASGPDEAI---KAIV-------DAGGVEVLVKLLTS------TDSEVQKEAARALANIASG-----PT----SA 204 (252)
T ss_dssp HHHHHHTTSCHHHH---HHHH-------HTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHTTS-----BH----HH
T ss_pred HHHHHHHcCCHHHH---HHHH-------HCcCHHHHHHHHCC------CCHHHHHHHHHHHHHHHcC-----CH----HH
Confidence 99999987543221 1111 11234566666653 2344554444444444431 11 24
Q ss_pred HHHHHHhCcHHHHHHHhccCchHH
Q psy8075 300 RYEVIMLGIQPIIDKLRTHENETL 323 (1074)
Q Consensus 300 R~Ef~~~GL~~~l~~Lr~~~~~~L 323 (1074)
+..+...|+...+-.+-...++.+
T Consensus 205 ~~~l~~~~~i~~L~~ll~~~~~~v 228 (252)
T 4hxt_A 205 IKAIVDAGGVEVLQKLLTSTDSEV 228 (252)
T ss_dssp HHHHHHTTHHHHHHHGGGCSCHHH
T ss_pred HHHHHHCCCHHHHHHHHCCCcHHH
Confidence 556777888776666554444443
No 21
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=91.30 E-value=1.9 Score=45.01 Aligned_cols=153 Identities=17% Similarity=0.206 Sum_probs=100.0
Q ss_pred hhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHH
Q psy8075 141 HSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLE 220 (1074)
Q Consensus 141 ~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~e 220 (1074)
-.....+++.+|+..|+.+|.. .+..+...++.||..|..+.......+.....+..|...|.+++..++..++.
T Consensus 86 ~~~~~~i~~~g~i~~L~~lL~~-----~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~ 160 (252)
T 4db8_A 86 NEQIQAVIDAGALPALVQLLSS-----PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALW 160 (252)
T ss_dssp HHHHHHHHHTTHHHHHHHGGGC-----SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHcC-----CCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHH
Confidence 3566778889999999999875 23456778889999998887776455556679999999999999999999999
Q ss_pred HHHHHhccCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHHHHHHHHHHHHHhcCCCCCCCHHHHHHHH
Q psy8075 221 ILGAVCLIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVLSYGPGQHSLEFRLHLR 300 (1074)
Q Consensus 221 lLaavc~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN~lv~~~~~~~dl~~R~~lR 300 (1074)
.|+.+|..+.... .++- +.+=...+++.|... +..++..++..+-.|... .+ + .+
T Consensus 161 ~L~~l~~~~~~~~---~~~~-------~~~~i~~L~~ll~~~------~~~v~~~a~~~L~~l~~~---~~--~----~~ 215 (252)
T 4db8_A 161 ALSNIASGGNEQI---QAVI-------DAGALPALVQLLSSP------NEQILQEALWALSNIASG---GN--E----QK 215 (252)
T ss_dssp HHHHHTTSCHHHH---HHHH-------HTTCHHHHHHGGGCS------SHHHHHHHHHHHHHHTTS---CH--H----HH
T ss_pred HHHHHHcCChHHH---HHHH-------HCCCHHHHHHHHCCC------CHHHHHHHHHHHHHHhcC---CH--H----HH
Confidence 9999987542221 1111 123355777777532 344444444444444422 11 1 34
Q ss_pred HHHHHhCcHHHHHHHhccCchHH
Q psy8075 301 YEVIMLGIQPIIDKLRTHENETL 323 (1074)
Q Consensus 301 ~Ef~~~GL~~~l~~Lr~~~~~~L 323 (1074)
..+...|..+.|..+-...++.+
T Consensus 216 ~~~~~~g~i~~L~~ll~~~~~~v 238 (252)
T 4db8_A 216 QAVKEAGALEKLEQLQSHENEKI 238 (252)
T ss_dssp HHHHHTTHHHHHHTTTTCSSSHH
T ss_pred HHHHHCCcHHHHHHHhCCCCHHH
Confidence 56667787776665544444443
No 22
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=90.52 E-value=2.9 Score=49.44 Aligned_cols=101 Identities=11% Similarity=0.137 Sum_probs=80.4
Q ss_pred hHHHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHH
Q psy8075 124 SRTRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDII 203 (1074)
Q Consensus 124 ~~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~l 203 (1074)
.....+..+|..|....-.=++.+++.||+..|+.+|..- ....+++++..||..|......-..++.+..+|..|
T Consensus 92 ~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL~~~----~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~L 167 (529)
T 3tpo_A 92 SQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKT----DCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAF 167 (529)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHHTCT----TCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCchHHHHHHCCCHHHHHHHHcCC----CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHH
Confidence 4466778888877665544577889999999999999642 234578888999998887666666666777899999
Q ss_pred HHhhcCCChhhHHHHHHHHHHHhcc
Q psy8075 204 AQSLSTENIKTKIAVLEILGAVCLI 228 (1074)
Q Consensus 204 a~sL~s~~~~tr~~v~elLaavc~~ 228 (1074)
+..|.+++..++..++..|+-+|..
T Consensus 168 v~LL~s~~~~v~e~A~~aL~nLa~~ 192 (529)
T 3tpo_A 168 ISLLASPHAHISEQAVWALGNIAGA 192 (529)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCCHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999988864
No 23
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=89.86 E-value=5.3 Score=47.02 Aligned_cols=117 Identities=10% Similarity=0.129 Sum_probs=85.3
Q ss_pred CChHHHHHHHhcccCCCCCCCChhhhhhHHHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHH
Q psy8075 97 DNPEQYIEQLRNFKSSPLTEHDDTEIKSRTRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSI 176 (1074)
Q Consensus 97 ~~P~~yi~~L~~~~~~~~~~~~~~~~~~~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~ 176 (1074)
.+-++.|+.|++. ..+.....+..+|..|....--=++..++.||+..|+++|..- ....++++.
T Consensus 57 ~~i~~~v~~l~s~-----------d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~~----~~~~lq~~A 121 (510)
T 3ul1_B 57 WSVEDIVKGINSN-----------NLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKT----DCSPIQFES 121 (510)
T ss_dssp CCHHHHHHHHTSS-----------CHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTCT----TCHHHHHHH
T ss_pred hhHHHHHHHhcCC-----------CHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHCCC----CCHHHHHHH
Confidence 3567888888742 1234466777888777543323356778899999999998642 224578888
Q ss_pred HHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHHHHHhcc
Q psy8075 177 IGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEILGAVCLI 228 (1074)
Q Consensus 177 l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elLaavc~~ 228 (1074)
..||.-|.-...--..++-+..+|..|+..|.+++..++..++..|+-+|..
T Consensus 122 a~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d 173 (510)
T 3ul1_B 122 AWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGD 173 (510)
T ss_dssp HHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 8999888654444445555667899999999999999999999999988864
No 24
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=87.73 E-value=10 Score=41.39 Aligned_cols=166 Identities=15% Similarity=0.183 Sum_probs=102.9
Q ss_pred hHHHHHHHHhhhhccCchhhHHHhhhcCcHHHHHH-HHHhcccccCCcchhHHHHHHHHHHhcC-hhhHHHhhcCccHHH
Q psy8075 124 SRTRILDSLRTALRTQPHSFVLRFIECEGLLTLLE-YLKNLDHYSGQTSLHSSIIGCIKALMNN-STGRSHVLGYPGAID 201 (1074)
Q Consensus 124 ~~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~-~L~~~~~~~~~~~~~~~~l~ClkalmN~-~~G~~~vl~~~~~i~ 201 (1074)
.....+..|...+. .++|...|+..||+..|+. +|.. .+..+....+.||..|.-+ ..-...|+ ...++.
T Consensus 56 ~k~~Al~~L~~lv~--~~dna~~~~~~G~l~~Lv~~lL~s-----~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv-~~g~l~ 127 (296)
T 1xqr_A 56 EREGALELLADLCE--NMDNAADFCQLSGMHLLVGRYLEA-----GAAGLRWRAAQLIGTCSQNVAAIQEQVL-GLGALR 127 (296)
T ss_dssp HHHHHHHHHHHHHT--SHHHHHHHHHTTHHHHHHHTTTTC-----SSHHHHHHHHHHHHHHHTTCHHHHHHHH-HTTHHH
T ss_pred HHHHHHHHHHHHHh--ChhhHHHHHHcCCHHHHHHHHHcC-----CCHHHHHHHHHHHHHHHhCCHHHHHHHH-HCCCHH
Confidence 33455666666554 4589999999999999998 7652 3445667788899888644 44444454 447888
Q ss_pred HHHHhhcC-CChhhHHHHHHHHHHHhccCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHHHH-HHHHH
Q psy8075 202 IIAQSLST-ENIKTKIAVLEILGAVCLIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIKT-ALMSF 279 (1074)
Q Consensus 202 ~la~sL~s-~~~~tr~~v~elLaavc~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~~-a~m~l 279 (1074)
.|...|.+ ++..+|..++-.|+.+|- |+.-..++|... .=+..|+..|... +..++. ||..+
T Consensus 128 ~Ll~LL~~~~~~~v~~~A~~ALsnl~~---~~~~~~~~~~~~-------ggi~~L~~lL~~~------d~~v~~~A~~aL 191 (296)
T 1xqr_A 128 KLLRLLDRDACDTVRVKALFAISCLVR---EQEAGLLQFLRL-------DGFSVLMRAMQQQ------VQKLKVKSAFLL 191 (296)
T ss_dssp HHHHHHHHCSCHHHHHHHHHHHHHHHT---TCHHHHHHHHHT-------THHHHHHHHHHSS------CHHHHHHHHHHH
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHHc---CCcHHHHHHHHC-------CCHHHHHHHHcCC------CHHHHHHHHHHH
Confidence 99988885 478888888888888775 233222233221 1255677777532 344443 45555
Q ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHhccCchHH
Q psy8075 280 LNAVLSYGPGQHSLEFRLHLRYEVIMLGIQPIIDKLRTHENETL 323 (1074)
Q Consensus 280 IN~lv~~~~~~~dl~~R~~lR~Ef~~~GL~~~l~~Lr~~~~~~L 323 (1074)
-|....+ ++ .+..+...|..+.|-.|-...+..+
T Consensus 192 s~L~~~~---~~-------~~~~vv~~g~i~~Lv~LL~~~d~~v 225 (296)
T 1xqr_A 192 QNLLVGH---PE-------HKGTLCSMGMVQQLVALVRTEHSPF 225 (296)
T ss_dssp HHHHHHC---GG-------GHHHHHHTTHHHHHHHHHTSCCSTH
T ss_pred HHHHhCC---hH-------HHHHHHHcCCHHHHHHHHcCCChhH
Confidence 5554432 22 4556778888776665544444333
No 25
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=86.64 E-value=7 Score=45.82 Aligned_cols=163 Identities=16% Similarity=0.142 Sum_probs=103.9
Q ss_pred hhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhc-ChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHH
Q psy8075 141 HSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMN-NSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVL 219 (1074)
Q Consensus 141 ~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN-~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~ 219 (1074)
-...+.+++.+++..|+.+|..- .+..+...++.||..|.. +...+..++. ...+..|...|.+.+..++..++
T Consensus 318 ~~~~~~~~~~~~l~~L~~lL~~~----~~~~v~~~A~~~L~nl~~~~~~~~~~~~~-~~~i~~L~~lL~~~~~~v~~~a~ 392 (528)
T 4b8j_A 318 DAQTQCIIDHQALPCLLSLLTQN----LKKSIKKEACWTISNITAGNKDQIQAVIN-AGIIGPLVNLLQTAEFDIKKEAA 392 (528)
T ss_dssp HHHHHHHHTTTHHHHHHHHHHSC----CCHHHHHHHHHHHHHHHTSCHHHHHHHHH-TTCHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHcCC----CcHHHHHHHHHHHHHHHCCCHHHHHHHHH-CCCHHHHHHHHhcCCHHHHHHHH
Confidence 35666777888899999988732 134456677778877764 3344555554 36788888888888999999999
Q ss_pred HHHHHHhccCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHHHHHHHHHHHHHhcCCCCCCCHHHH---
Q psy8075 220 EILGAVCLIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVLSYGPGQHSLEFR--- 296 (1074)
Q Consensus 220 elLaavc~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN~lv~~~~~~~dl~~R--- 296 (1074)
..|+.+|.. |.......|- +.+-+..|+..|.. .+..+...++..+..|+..+ +.....
T Consensus 393 ~aL~nl~~~--~~~~~~~~l~-------~~~~i~~L~~lL~~------~d~~v~~~al~~L~~l~~~~---~~~~~~~~~ 454 (528)
T 4b8j_A 393 WAISNATSG--GSHDQIKYLV-------SEGCIKPLCDLLIC------PDIRIVTVCLEGLENILKVG---ETDKTLAAG 454 (528)
T ss_dssp HHHHHHHHH--SCHHHHHHHH-------HTTCHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHH---HHHHHHHTC
T ss_pred HHHHHHHcC--CCHHHHHHHH-------HCCCHHHHHHHHcC------CCHHHHHHHHHHHHHHHHHH---HHhhhcccc
Confidence 999988874 2222222221 12346677777753 23455555666666666431 110000
Q ss_pred --HHHHHHHHHhCcHHHHHHHhccCchHHHHH
Q psy8075 297 --LHLRYEVIMLGIQPIIDKLRTHENETLDRH 326 (1074)
Q Consensus 297 --~~lR~Ef~~~GL~~~l~~Lr~~~~~~L~~q 326 (1074)
-.....|..+|..+.|..|..++++++...
T Consensus 455 ~~~~~~~~i~~~~~~~~l~~L~~~~~~~v~~~ 486 (528)
T 4b8j_A 455 DVNVFSQMIDEAEGLEKIENLQSHDNNEIYEK 486 (528)
T ss_dssp SCCHHHHHHHHTTHHHHHHHGGGCSSHHHHHH
T ss_pred cccHHHHHHHHCCcHHHHHHHHcCCCHHHHHH
Confidence 024667788998889999988888776543
No 26
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=83.76 E-value=9.5 Score=38.28 Aligned_cols=84 Identities=14% Similarity=0.158 Sum_probs=65.5
Q ss_pred chhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHH
Q psy8075 140 PHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVL 219 (1074)
Q Consensus 140 ~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~ 219 (1074)
.-...+.+++.+|+..|+.+|..- +..+...++.||..|..........+-+...+..|...|.+++..++..++
T Consensus 85 ~~~~~~~i~~~g~i~~L~~lL~~~-----~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~ 159 (210)
T 4db6_A 85 GNEQIQAVIDAGALPALVQLLSSP-----NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEAL 159 (210)
T ss_dssp CHHHHHHHHHTTCHHHHHHHTTCS-----CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHH
T ss_pred CcHHHHHHHHCCCHHHHHHHHcCC-----cHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHH
Confidence 345677888899999999998642 345667788888888854444433444667899999999999999999999
Q ss_pred HHHHHHhcc
Q psy8075 220 EILGAVCLI 228 (1074)
Q Consensus 220 elLaavc~~ 228 (1074)
..|+.+|..
T Consensus 160 ~aL~~l~~~ 168 (210)
T 4db6_A 160 WALSNIASG 168 (210)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHcC
Confidence 999999985
No 27
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=82.16 E-value=21 Score=41.69 Aligned_cols=101 Identities=14% Similarity=0.154 Sum_probs=77.6
Q ss_pred hHHHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHH
Q psy8075 124 SRTRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDII 203 (1074)
Q Consensus 124 ~~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~l 203 (1074)
.....+..|+..+...+-.++..+++.+++..|+.+|..-+ ...++..++.||..|..........+....+|..|
T Consensus 90 ~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~~----~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L 165 (528)
T 4b8j_A 90 LQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTRED----FPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIF 165 (528)
T ss_dssp HHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCTT----CHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCCC----CHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHH
Confidence 34556677777666665578889999999999999986421 24567788899998887644444444455789999
Q ss_pred HHhhcCCChhhHHHHHHHHHHHhcc
Q psy8075 204 AQSLSTENIKTKIAVLEILGAVCLI 228 (1074)
Q Consensus 204 a~sL~s~~~~tr~~v~elLaavc~~ 228 (1074)
...|.+++..++..++..|+.+|..
T Consensus 166 ~~lL~~~~~~v~~~a~~aL~~l~~~ 190 (528)
T 4b8j_A 166 VKLLGSSSDDVREQAVWALGNVAGD 190 (528)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCCHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999864
No 28
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=80.48 E-value=17 Score=30.87 Aligned_cols=60 Identities=23% Similarity=0.390 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q psy8075 441 AKKKADELEMENVDLSNRLAKKEQELDQKTQEKEDLDESLSRIKDRLEKETAGHLEAKQK 500 (1074)
Q Consensus 441 ~~~~~eel~~e~~eL~~kl~~~e~el~~k~~e~e~l~~~l~~l~~~l~~~~~~~~~~~~~ 500 (1074)
+..++.+++.++.+|+.++..++..++..+.+.+.+...+..+.+.|.-.+.++...++.
T Consensus 5 ~~~kLq~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld~KI~eL~elrq~ 64 (72)
T 3cve_A 5 SHMKLQEVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTLLEILDGKIFELTELRDN 64 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 345677777888888888888888887777666666666666655555555444443333
No 29
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=80.31 E-value=12 Score=40.81 Aligned_cols=137 Identities=12% Similarity=0.148 Sum_probs=87.2
Q ss_pred HHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHh-cChhhHHHhhcCccHHHHHHH
Q psy8075 127 RILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALM-NNSTGRSHVLGYPGAIDIIAQ 205 (1074)
Q Consensus 127 ~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~Clkalm-N~~~G~~~vl~~~~~i~~la~ 205 (1074)
..+.-|.....+++ .--+.+++.+|+..|+.+|..- .+..+...++.+|-.|. |+..+...+... .++..|+.
T Consensus 101 ~Aa~~Lg~ia~~n~-~~~~~vv~~g~l~~Ll~LL~~~----~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~-ggi~~L~~ 174 (296)
T 1xqr_A 101 RAAQLIGTCSQNVA-AIQEQVLGLGALRKLLRLLDRD----ACDTVRVKALFAISCLVREQEAGLLQFLRL-DGFSVLMR 174 (296)
T ss_dssp HHHHHHHHHHTTCH-HHHHHHHHTTHHHHHHHHHHHC----SCHHHHHHHHHHHHHHHTTCHHHHHHHHHT-THHHHHHH
T ss_pred HHHHHHHHHHhCCH-HHHHHHHHCCCHHHHHHHHccC----CCHHHHHHHHHHHHHHHcCCcHHHHHHHHC-CCHHHHHH
Confidence 33444443334443 2233577899999999999741 12334556777777776 567777777764 58999999
Q ss_pred hhcCCChhhHHHHHHHHHHHhccCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHHHHHHHHHHHHHhc
Q psy8075 206 SLSTENIKTKIAVLEILGAVCLIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVLS 285 (1074)
Q Consensus 206 sL~s~~~~tr~~v~elLaavc~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN~lv~ 285 (1074)
.|.+.+.+++..++-.|+.+|... ....+++ .+.+=+..++..|... +..++..++..|-.|+.
T Consensus 175 lL~~~d~~v~~~A~~aLs~L~~~~---~~~~~~v-------v~~g~i~~Lv~LL~~~------d~~v~~~al~aL~~l~~ 238 (296)
T 1xqr_A 175 AMQQQVQKLKVKSAFLLQNLLVGH---PEHKGTL-------CSMGMVQQLVALVRTE------HSPFHEHVLGALCSLVT 238 (296)
T ss_dssp HHHSSCHHHHHHHHHHHHHHHHHC---GGGHHHH-------HHTTHHHHHHHHHTSC------CSTHHHHHHHHHHHHHT
T ss_pred HHcCCCHHHHHHHHHHHHHHHhCC---hHHHHHH-------HHcCCHHHHHHHHcCC------ChhHHHHHHHHHHHHHh
Confidence 999999999999999888887632 1111222 1223355777777542 34556666666655554
No 30
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=78.03 E-value=26 Score=40.96 Aligned_cols=78 Identities=13% Similarity=0.170 Sum_probs=55.2
Q ss_pred HHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcC-hhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHH
Q psy8075 144 VLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNN-STGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEIL 222 (1074)
Q Consensus 144 v~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~-~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elL 222 (1074)
++.+++.+++..|+.+|.. .+..+...++.||..|... ......++ +...+..|...|.+++..+|..++..|
T Consensus 292 ~~~~~~~~~v~~Lv~lL~~-----~~~~v~~~a~~~L~~l~~~~~~~~~~~~-~~~~l~~L~~lL~~~~~~vr~~A~~aL 365 (530)
T 1wa5_B 292 IQAVIDVRIPKRLVELLSH-----ESTLVQTPALRAVGNIVTGNDLQTQVVI-NAGVLPALRLLLSSPKENIKKEACWTI 365 (530)
T ss_dssp HHHHHHTTCHHHHHHGGGC-----SCHHHHHHHHHHHHHHTTSCHHHHHHHH-HTTHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHCC-----CChhhHHHHHHHHHHHHcCCHHHHHHHH-HcchHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4445556777777777652 2344566778888888754 33344444 447888999999999999999999999
Q ss_pred HHHhc
Q psy8075 223 GAVCL 227 (1074)
Q Consensus 223 aavc~ 227 (1074)
+.+|.
T Consensus 366 ~~l~~ 370 (530)
T 1wa5_B 366 SNITA 370 (530)
T ss_dssp HHHTT
T ss_pred HHHHc
Confidence 88874
No 31
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=76.39 E-value=13 Score=32.26 Aligned_cols=62 Identities=21% Similarity=0.340 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q psy8075 440 AAKKKADELEMENVDLSNRLAKKEQELDQKTQEKEDLDESLSRIKDRLEKETAGHLEAKQKV 501 (1074)
Q Consensus 440 ~~~~~~eel~~e~~eL~~kl~~~e~el~~k~~e~e~l~~~l~~l~~~l~~~~~~~~~~~~~~ 501 (1074)
.+..++.+++.++.+|+.++..++..++..+.+.+.+...+..+.+.|.-.+.++...++.+
T Consensus 10 ~~~~klq~~E~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~KI~eL~elRqgL 71 (79)
T 3cvf_A 10 ETQQKVQDLETRNAELEHQLRAMERSLEEARAERERARAEVGRAAQLLDVSLFELSELREGL 71 (79)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34456777778888888888888888877777777666666666666655555544444433
No 32
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=74.70 E-value=53 Score=37.80 Aligned_cols=81 Identities=16% Similarity=0.224 Sum_probs=64.7
Q ss_pred hhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHH
Q psy8075 142 SFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEI 221 (1074)
Q Consensus 142 ~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~el 221 (1074)
.....+++.+|+..|+.+|.. .+..++..++.+|..|..........+....++..|...|.+++..++..++..
T Consensus 92 ~~~~~i~~~g~i~~L~~lL~~-----~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~ 166 (529)
T 1jdh_A 92 EGLLAIFKSGGIPALVKMLGS-----PVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDC 166 (529)
T ss_dssp HHHHHHHHTTHHHHHHHHTTC-----SCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHH
T ss_pred hhHHHHHHcCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHH
Confidence 466778888999999999864 234567788888888877654455566667789999999999999999999999
Q ss_pred HHHHhc
Q psy8075 222 LGAVCL 227 (1074)
Q Consensus 222 Laavc~ 227 (1074)
|..+|.
T Consensus 167 L~~la~ 172 (529)
T 1jdh_A 167 LQILAY 172 (529)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 988887
No 33
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=73.33 E-value=67 Score=38.55 Aligned_cols=81 Identities=16% Similarity=0.224 Sum_probs=63.6
Q ss_pred hhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHH
Q psy8075 142 SFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEI 221 (1074)
Q Consensus 142 ~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~el 221 (1074)
.-...+++.+|+..|+.+|.. .+..++..++.+|..|..........+.....|..|...|.+++.+.+..++..
T Consensus 89 ~~~~~i~~~g~i~~Lv~lL~~-----~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~ 163 (644)
T 2z6h_A 89 EGLLAIFKSGGIPALVKMLGS-----PVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDC 163 (644)
T ss_dssp HHHHHHHTTTHHHHHHHHTTC-----SSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHH
T ss_pred hhHHHHHHcCCHHHHHHHHhC-----CCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcCCHHHHHHHHHH
Confidence 356667788999999998864 234567788888888876654555556667789999999999999999999999
Q ss_pred HHHHhc
Q psy8075 222 LGAVCL 227 (1074)
Q Consensus 222 Laavc~ 227 (1074)
|..+|.
T Consensus 164 L~~La~ 169 (644)
T 2z6h_A 164 LQILAY 169 (644)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 998887
No 34
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=72.27 E-value=65 Score=39.93 Aligned_cols=80 Identities=16% Similarity=0.232 Sum_probs=65.4
Q ss_pred hHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHH
Q psy8075 143 FVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEIL 222 (1074)
Q Consensus 143 Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elL 222 (1074)
....+++.+|+..|+++|.. .+..++..++.||..|+.........+.....|..|...|.+++.+++..++..|
T Consensus 226 ~~~~i~~~g~I~~Lv~lL~~-----~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL 300 (780)
T 2z6g_A 226 GLLAIFKSGGIPALVNMLGS-----PVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCL 300 (780)
T ss_dssp HHHHHHHTTHHHHHHHHTTC-----SCHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHH
T ss_pred hHHHHHHcCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHH
Confidence 35567778999999999864 2355788899999999887666666676777899999999999999999999999
Q ss_pred HHHhc
Q psy8075 223 GAVCL 227 (1074)
Q Consensus 223 aavc~ 227 (1074)
..+|.
T Consensus 301 ~~La~ 305 (780)
T 2z6g_A 301 QILAY 305 (780)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 98887
No 35
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=71.85 E-value=37 Score=38.16 Aligned_cols=156 Identities=17% Similarity=0.175 Sum_probs=92.9
Q ss_pred hHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhc-ChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHH
Q psy8075 143 FVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMN-NSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEI 221 (1074)
Q Consensus 143 Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN-~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~el 221 (1074)
..+.+++.+++..|+.+|.. .+..+...++.||..|.. +......++. ...+..|...|.+++..+|..++..
T Consensus 268 ~~~~~~~~~~l~~L~~ll~~-----~~~~vr~~a~~~L~~l~~~~~~~~~~~~~-~~~l~~L~~~l~~~~~~v~~~a~~~ 341 (450)
T 2jdq_A 268 QTQVILNCSALQSLLHLLSS-----PKESIKKEACWTISNITAGNRAQIQTVID-ANIFPALISILQTAEFRTRKEAAWA 341 (450)
T ss_dssp HHHHHHTTTHHHHHHHHTTC-----SSHHHHHHHHHHHHHHTTSCHHHHHHHHH-TTHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHCccHHHHHHHHcC-----CCHHHHHHHHHHHHHHHcCCHHHHHHHHH-CCCHHHHHHHHhcCCHHHHHHHHHH
Confidence 34456667788888888753 234456678888888874 4555665554 4678888888888899999999999
Q ss_pred HHHHhccCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHHHHHHHHHHHHHhcCCCCCCCHHHH-----
Q psy8075 222 LGAVCLIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVLSYGPGQHSLEFR----- 296 (1074)
Q Consensus 222 Laavc~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN~lv~~~~~~~dl~~R----- 296 (1074)
|+.+|.. |.......+- +.+-+..|++.+... +..++..++..+..++..+ +. ...
T Consensus 342 L~~l~~~--~~~~~~~~l~-------~~~~i~~L~~ll~~~------~~~v~~~a~~aL~~l~~~~---~~-~~~~~~~~ 402 (450)
T 2jdq_A 342 ITNATSG--GSAEQIKYLV-------ELGCIKPLCDLLTVM------DSKIVQVALNGLENILRLG---EQ-EAKRNGTG 402 (450)
T ss_dssp HHHHHHH--CCHHHHHHHH-------HHTCHHHHHHGGGSS------CHHHHHHHHHHHHHHHHHH---HH-HHHHSCSC
T ss_pred HHHHHcC--CCHHHHHHHH-------HCCCHHHHHHHhcCC------CHHHHHHHHHHHHHHHHhc---hh-hhhccccc
Confidence 9888863 1111111111 113355677766532 3455555555555555421 10 000
Q ss_pred -HHHHHHHHHhCcHHHHHHHhccCchHH
Q psy8075 297 -LHLRYEVIMLGIQPIIDKLRTHENETL 323 (1074)
Q Consensus 297 -~~lR~Ef~~~GL~~~l~~Lr~~~~~~L 323 (1074)
-.+...|..+|..+.|..|..+.+..+
T Consensus 403 ~~~~~~~l~~~g~~~~l~~l~~~~~~~v 430 (450)
T 2jdq_A 403 INPYCALIEEAYGLDKIEFLQSHENQEI 430 (450)
T ss_dssp CCHHHHHHHHHHCHHHHHHHHCHHHHHH
T ss_pred hhHHHHHHHHcCcHHHHHHHHcCCCHHH
Confidence 023456677777666777766555443
No 36
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=69.44 E-value=33 Score=42.79 Aligned_cols=144 Identities=14% Similarity=0.167 Sum_probs=99.8
Q ss_pred hHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHH
Q psy8075 143 FVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEIL 222 (1074)
Q Consensus 143 Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elL 222 (1074)
-.+..++.+|+..|+++|.. .+..++...+.||..|+.+......++.....+..|...|.+++..++..++-.|
T Consensus 615 ~~~~Ii~aG~l~~Lv~LL~s-----~~~~Vq~~A~~~L~NLa~~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~AL 689 (810)
T 3now_A 615 VRQRIIKEQGVSKIEYYLME-----DHLYLTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGAL 689 (810)
T ss_dssp HHHHHHHTTHHHHHHHHHHS-----CCTTHHHHHHHHHHHHTTSHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHhCChHHHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHH
Confidence 34456678899999999873 2344677889999999999988888885578999999999999999999999888
Q ss_pred HHHhccCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHHH-HHHHHHHHHHhcCCCCCCCHHHHHHHHH
Q psy8075 223 GAVCLIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIK-TALMSFLNAVLSYGPGQHSLEFRLHLRY 301 (1074)
Q Consensus 223 aavc~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~-~a~m~lIN~lv~~~~~~~dl~~R~~lR~ 301 (1074)
+.++.. +....+++-. ..+=...|++.|.. .+.+++ .|+..+.|.+-++ . ..+.
T Consensus 690 anLt~~---s~~~~~~ii~------~~g~I~~Lv~LL~s------~d~~vq~~A~~aL~NL~~~s----~------e~~~ 744 (810)
T 3now_A 690 AIITSV---SVKCCEKILA------IASWLDILHTLIAN------PSPAVQHRGIVIILNMINAG----E------EIAK 744 (810)
T ss_dssp HHHHHH---CHHHHHHHHT------STTHHHHHHHHHTC------SSHHHHHHHHHHHHHHHTTC----H------HHHH
T ss_pred HHHhCC---CHHHHHHHHH------HcCCHHHHHHHHCC------CCHHHHHHHHHHHHHHHhCC----H------HHHH
Confidence 888862 2222233211 01223467776653 234443 5666777766532 1 2467
Q ss_pred HHHHhCcHHHHHHHh
Q psy8075 302 EVIMLGIQPIIDKLR 316 (1074)
Q Consensus 302 Ef~~~GL~~~l~~Lr 316 (1074)
.+..+|..+.|..|-
T Consensus 745 ~l~e~G~i~~L~~LL 759 (810)
T 3now_A 745 KLFETDIMELLSGLG 759 (810)
T ss_dssp HHHTSTHHHHHTTSC
T ss_pred HHHHCCCHHHHHHHH
Confidence 888899888777663
No 37
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=65.70 E-value=1.3e+02 Score=33.60 Aligned_cols=119 Identities=13% Similarity=0.188 Sum_probs=73.9
Q ss_pred HhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHHHHH
Q psy8075 146 RFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEILGAV 225 (1074)
Q Consensus 146 ~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elLaav 225 (1074)
.+++.+++..|+.+|.. .+..+...++.||..|..........+-+...+..|...|.+++..+|..++..|+.+
T Consensus 229 ~~~~~~~i~~L~~ll~~-----~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l 303 (450)
T 2jdq_A 229 AVIDAGVCRRLVELLMH-----NDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNI 303 (450)
T ss_dssp HHHHTTTHHHHHHHTTC-----SCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHCC-----CchhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 34445677777777642 2344566788888888776554444444557899999999999999999999999888
Q ss_pred hccCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHHH-HHHHHHHHHHhc
Q psy8075 226 CLIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIK-TALMSFLNAVLS 285 (1074)
Q Consensus 226 c~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~-~a~m~lIN~lv~ 285 (1074)
|. |.....+++-. ..-+..+++.|... +..++ .+|..+-|....
T Consensus 304 ~~---~~~~~~~~~~~-------~~~l~~L~~~l~~~------~~~v~~~a~~~L~~l~~~ 348 (450)
T 2jdq_A 304 TA---GNRAQIQTVID-------ANIFPALISILQTA------EFRTRKEAAWAITNATSG 348 (450)
T ss_dssp TT---SCHHHHHHHHH-------TTHHHHHHHHHHHS------CHHHHHHHHHHHHHHHHH
T ss_pred Hc---CCHHHHHHHHH-------CCCHHHHHHHHhcC------CHHHHHHHHHHHHHHHcC
Confidence 76 22222222211 12244566666532 23343 455566666654
No 38
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=65.57 E-value=1.2e+02 Score=35.13 Aligned_cols=100 Identities=15% Similarity=0.164 Sum_probs=72.4
Q ss_pred HHHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHH
Q psy8075 125 RTRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIA 204 (1074)
Q Consensus 125 ~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la 204 (1074)
....+..|+..+....-.-++.+++.+++..|+.+|..- .+..++..++.||..|..........+....+|..|.
T Consensus 104 ~~~A~~~L~~ll~~~~~~~~~~~~~~g~i~~Lv~~L~~~----~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv 179 (530)
T 1wa5_B 104 QLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMREN----QPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFI 179 (530)
T ss_dssp HHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTT----SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhCCCCCccHHHHHHCCCHHHHHHHhCCC----CCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHH
Confidence 345666777666543222235677889999999887532 1345678889999988876544445555667899999
Q ss_pred HhhcCCChhhHHHHHHHHHHHhcc
Q psy8075 205 QSLSTENIKTKIAVLEILGAVCLI 228 (1074)
Q Consensus 205 ~sL~s~~~~tr~~v~elLaavc~~ 228 (1074)
..|.+++..+|..++..|+.+|..
T Consensus 180 ~lL~~~~~~vr~~A~~aL~~l~~~ 203 (530)
T 1wa5_B 180 QLLYTGSVEVKEQAIWALGNVAGD 203 (530)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCCHHHHHHHHHHHHHHhCC
Confidence 999999999999999999988853
No 39
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=64.67 E-value=61 Score=38.89 Aligned_cols=142 Identities=13% Similarity=0.183 Sum_probs=92.2
Q ss_pred hhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCC-ChhhHHHHHHHHHHHh
Q psy8075 148 IECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTE-NIKTKIAVLEILGAVC 226 (1074)
Q Consensus 148 i~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~-~~~tr~~v~elLaavc 226 (1074)
+..+++..|+.+|.. .+..++..++.||..|.........++.++..+..|+..|.+. +..++..++..|..+|
T Consensus 11 ~~~g~i~~Lv~lL~~-----~~~~vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls 85 (644)
T 2z6h_A 11 LATRAIPELTKLLND-----EDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLS 85 (644)
T ss_dssp -CTTTHHHHHHHHTC-----SCHHHHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHT
T ss_pred hhhchHHHHHHHHcC-----CCHHHHHHHHHHHHHHHCCChhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 456788999998862 2445677889999999888777777888888999999999764 8899999999888777
Q ss_pred ccCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHH-HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Q psy8075 227 LIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSI-KTALMSFLNAVLSYGPGQHSLEFRLHLRYEVIM 305 (1074)
Q Consensus 227 ~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~-~~a~m~lIN~lv~~~~~~~dl~~R~~lR~Ef~~ 305 (1074)
..+++...+. +.+-...+++.|... +... ..|+..|.|...+. +. .+..+..
T Consensus 86 ~~~~~~~~i~-----------~~g~i~~Lv~lL~~~------~~~v~~~A~~aL~nL~~~~----~~------~~~~v~~ 138 (644)
T 2z6h_A 86 HHREGLLAIF-----------KSGGIPALVKMLGSP------VDSVLFYAITTLHNLLLHQ----EG------AKMAVRL 138 (644)
T ss_dssp TSHHHHHHHH-----------TTTHHHHHHHHTTCS------SHHHHHHHHHHHHHHHHHS----TT------HHHHHHH
T ss_pred cChhhHHHHH-----------HcCCHHHHHHHHhCC------CHHHHHHHHHHHHHHHhCc----ch------hHHHHHH
Confidence 6543222221 122344666666432 2233 35566777777653 21 3445566
Q ss_pred hCcHHHHHHHhccCch
Q psy8075 306 LGIQPIIDKLRTHENE 321 (1074)
Q Consensus 306 ~GL~~~l~~Lr~~~~~ 321 (1074)
.|..+.|-.+-...+.
T Consensus 139 ~g~i~~Lv~lL~~~~~ 154 (644)
T 2z6h_A 139 AGGLQKMVALLNKTNV 154 (644)
T ss_dssp TTHHHHHHHGGGCCCH
T ss_pred CCChHHHHHHHCcCCH
Confidence 7766655544333343
No 40
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=64.38 E-value=1.7e+02 Score=33.46 Aligned_cols=71 Identities=11% Similarity=0.138 Sum_probs=37.1
Q ss_pred hhHHHHHHHHHHHHhhhcccCCCccchh--hhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8075 393 PQHWLLLDRLAQQLTLQTETGEDYDHIL--LKINVKKVVHLLAKEEEIVAAKKKADELEMENVDLSNRLAKKEQELDQK 469 (1074)
Q Consensus 393 ~~~~~lld~~v~qivl~~~~g~d~d~~~--l~~~v~~li~~l~~~~e~~~~~~~~eel~~e~~eL~~kl~~~e~el~~k 469 (1074)
..+|..+...++++... ..+|+-+. +.-.++.+++....+ .++......+++++++++..+.+.+.+....
T Consensus 351 ~~~~~~~~~~~~~vl~G---~~t~eeal~~~~~~i~~~l~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (471)
T 3mq9_A 351 SAFWYAVRTAVINAASG---RQTVDEALKDAQTRITAARDGLRAV---MEARNVTHLLQQELTEAQKGFQDVEAQAATA 423 (471)
T ss_dssp HHHHHHHHHHHHHHHHS---SSCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHhhHHH---HHhhhHHHHHHHHHHHHhhhHHHHHHHhhhc
Confidence 45677777777776532 23443221 223344444443322 2333444556666777777776666554433
No 41
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=62.14 E-value=1.8 Score=49.30 Aligned_cols=12 Identities=33% Similarity=0.335 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHh
Q psy8075 784 IKSVMEASREVT 795 (1074)
Q Consensus 784 l~~v~~A~~~l~ 795 (1074)
+..+..|..-|.
T Consensus 167 ~~qi~~aL~~LH 178 (400)
T 1nxk_A 167 MKSIGEAIQYLH 178 (400)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 334444444443
No 42
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=60.77 E-value=55 Score=37.86 Aligned_cols=29 Identities=14% Similarity=0.192 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy8075 475 DLDESLSRIKDRLEKETAGHLEAKQKVAE 503 (1074)
Q Consensus 475 ~l~~~l~~l~~~l~~~~~~~~~~~~~~~~ 503 (1074)
+|++.+..|+.++..++..++.++..|..
T Consensus 114 ELRRrIqyLKekVdnQlsnIrvLQsnLed 142 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQHIQLLQKNVRA 142 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444555544444444444333333
No 43
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=60.30 E-value=1.8 Score=51.45 Aligned_cols=21 Identities=14% Similarity=0.259 Sum_probs=10.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHH
Q psy8075 877 VSMKELENDMTQLRNNLKEVS 897 (1074)
Q Consensus 877 vs~~~l~~d~~~l~~~l~~~~ 897 (1074)
++...+..=+.++-.+|.-+.
T Consensus 360 l~~~~~~~i~~qi~~~L~~LH 380 (535)
T 2h8h_A 360 LRLPQLVDMAAQIASGMAYVE 380 (535)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 344444444455555555543
No 44
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=59.95 E-value=1.2e+02 Score=33.46 Aligned_cols=143 Identities=11% Similarity=0.175 Sum_probs=85.5
Q ss_pred CChHHHHHHHhcccCCCCCCC-----C--hhhhhhHHHHHHHHhhhhccCch---------hhHHHhhhcCcHHHHHHHH
Q psy8075 97 DNPEQYIEQLRNFKSSPLTEH-----D--DTEIKSRTRILDSLRTALRTQPH---------SFVLRFIECEGLLTLLEYL 160 (1074)
Q Consensus 97 ~~P~~yi~~L~~~~~~~~~~~-----~--~~~~~~~~~~l~~L~v~Lrt~~~---------~Wv~~Fi~~~Gl~~L~~~L 160 (1074)
.+|.++|+.++..... ++. . ....+...+.|..++..|-...- .-.++|...+=+..|+..|
T Consensus 10 ktP~elVr~l~d~l~~--l~~~~~~~~~~~k~~ee~sK~l~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~dll~~Li~~l 87 (341)
T 1upk_A 10 KSPADIVKNLKESMAV--LEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSGLLSTLVADL 87 (341)
T ss_dssp CCHHHHHHHHHHHHHH--HHC---CTHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHSHHHHHHHTG
T ss_pred CCHHHHHHHHHHHHHH--HhccccccchhhHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 4688888777653310 000 0 01225667778888877764321 3567777666667777777
Q ss_pred HhcccccCCcchhHHHHHHHHHHhcChh-----hHHHhhcCccHHHHHHHhhcCCCh------hhHHHH-HHHHHHHhcc
Q psy8075 161 KNLDHYSGQTSLHSSIIGCIKALMNNST-----GRSHVLGYPGAIDIIAQSLSTENI------KTKIAV-LEILGAVCLI 228 (1074)
Q Consensus 161 ~~~~~~~~~~~~~~~~l~ClkalmN~~~-----G~~~vl~~~~~i~~la~sL~s~~~------~tr~~v-~elLaavc~~ 228 (1074)
..++.+... .+..|+..++-.+. ..+++..||+.+..|..+-..+.+ ..|..+ .|.|+.+.++
T Consensus 88 ~~L~fE~RK-----d~~~if~~llr~~~~~~~p~v~Yl~~~peil~~L~~gYe~~diAl~~G~mLRecir~e~la~~iL~ 162 (341)
T 1upk_A 88 QLIDFEGKK-----DVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILW 162 (341)
T ss_dssp GGSCHHHHH-----HHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGGSTTTHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred ccCCchhhc-----cHHHHHHHHHhcccCCCCchhHHHHcCHHHHHHHHHhhccchhHhHHHHHHHHHHHhHHHHHHHhc
Confidence 777765432 24444555555443 567888999999999999887752 122222 3444444433
Q ss_pred ------------CCchhHHHHHHhhHHHHc
Q psy8075 229 ------------PGGHKKVLDAMSHYQRFC 246 (1074)
Q Consensus 229 ------------~~Gh~~VL~Al~~~~~~~ 246 (1074)
....+..-+||..|++..
T Consensus 163 ~~~f~~fF~yv~~~~FdiasDAf~TfkelL 192 (341)
T 1upk_A 163 SEQFYDFFRYVEMSTFDIASDAFATFKDLL 192 (341)
T ss_dssp SGGGGHHHHHTTCSSHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhcCCCchHHHHHHHHHHHHH
Confidence 245778889999887653
No 45
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=59.94 E-value=99 Score=27.88 Aligned_cols=28 Identities=29% Similarity=0.372 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8075 439 VAAKKKADELEMENVDLSNRLAKKEQEL 466 (1074)
Q Consensus 439 ~~~~~~~eel~~e~~eL~~kl~~~e~el 466 (1074)
+.+..+...++.++..|+.++..++.++
T Consensus 33 k~~e~~~~~~E~Ei~sL~kk~~~lE~el 60 (101)
T 3u1c_A 33 KAAEERSKQLEDDIVQLEKQLRVTEDSR 60 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444444444444333
No 46
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=58.23 E-value=98 Score=27.24 Aligned_cols=6 Identities=33% Similarity=0.800 Sum_probs=2.3
Q ss_pred HHHHHH
Q psy8075 504 LEDRIS 509 (1074)
Q Consensus 504 l~~~l~ 509 (1074)
|+.++.
T Consensus 75 LE~~l~ 80 (89)
T 3bas_A 75 LENEVA 80 (89)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 47
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=57.52 E-value=75 Score=38.28 Aligned_cols=162 Identities=12% Similarity=0.176 Sum_probs=93.9
Q ss_pred CCChHHHHHHHhcccCCCCCCCChhhhhhHHHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHH
Q psy8075 96 PDNPEQYIEQLRNFKSSPLTEHDDTEIKSRTRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSS 175 (1074)
Q Consensus 96 ~~~P~~yi~~L~~~~~~~~~~~~~~~~~~~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~ 175 (1074)
..+++++|..|-..... .. -.+.+...+.+|+-.-| .|-.+++ .+|+..|+++|.+-. .+..+--.
T Consensus 16 ~qs~~etI~~L~~Rl~~----~t--l~eDRR~Av~~Lk~~sk----~y~~~Vg-~~~l~~li~~L~~d~---~D~e~v~~ 81 (651)
T 3grl_A 16 QHTEAETIQKLCDRVAS----ST--LLDDRRNAVRALKSLSK----KYRLEVG-IQAMEHLIHVLQTDR---SDSEIIGY 81 (651)
T ss_dssp --CHHHHHHHHHHHHHH----CC--SHHHHHHHHHHHHHTTT----TTTTHHH-HHTHHHHHHHHHSCT---TCHHHHHH
T ss_pred CCChhhHHHHHHHHHhh----cc--chhHHHHHHHHHHHHHH----HhHHHhh-hhhHHHHHHHHhccc---ccHHHHHH
Confidence 45788888887543310 00 12233455666654433 4555555 689999999998642 12222222
Q ss_pred HHHHHHHHhcChh---------------h---HHHhhcCccHHHHHHHhhcCCChhhHHHHHHHHHHHhccCCchhHHHH
Q psy8075 176 IIGCIKALMNNST---------------G---RSHVLGYPGAIDIIAQSLSTENIKTKIAVLEILGAVCLIPGGHKKVLD 237 (1074)
Q Consensus 176 ~l~ClkalmN~~~---------------G---~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elLaavc~~~~Gh~~VL~ 237 (1074)
++-.|-.+++... | .+.+++.++.|..|...|.+.+..+|.-++++|.++|.... +.+.+
T Consensus 82 ~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~--~~~Q~ 159 (651)
T 3grl_A 82 ALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLG--PQVQQ 159 (651)
T ss_dssp HHHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSH--HHHHH
T ss_pred HHHHHHHHhCCCCcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCc--HHHHH
Confidence 3444444454321 2 24567899999999999999999999999999999998532 22333
Q ss_pred HHhhHHHHcccccchHHHHHHhhhccCCccchhHHHHHHHHHHHHHhc
Q psy8075 238 AMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVLS 285 (1074)
Q Consensus 238 Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN~lv~ 285 (1074)
++-.. ..=-..||..|..+ ...++..++.++=.|..
T Consensus 160 ~Il~~------p~gi~~Lv~lL~d~------rE~iRneallLL~~Lt~ 195 (651)
T 3grl_A 160 IILVS------PMGVSRLMDLLADS------REVIRNDGVLLLQALTR 195 (651)
T ss_dssp HHHHS------TTHHHHHHGGGGCS------SHHHHHHHHHHHHHHHT
T ss_pred HHHhC------cccHHHHHHHHhCc------hHHHHHHHHHHHHHHhc
Confidence 33211 01122566666532 23345555555555654
No 48
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=56.84 E-value=86 Score=39.06 Aligned_cols=153 Identities=13% Similarity=0.064 Sum_probs=96.4
Q ss_pred hHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHH
Q psy8075 143 FVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEIL 222 (1074)
Q Consensus 143 Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elL 222 (1074)
|++.-++.|++..|+.+|.. .+..++..++.||..|-.+...+..|+++ .+|..|...|.+....++..+..-|
T Consensus 487 r~~~VveaGaVp~LV~LL~s-----~s~~vqe~Aa~aL~NLA~d~~~r~~Vv~~-Gaip~Lv~LL~s~~~~~k~~Aa~AL 560 (810)
T 3now_A 487 RITVLANEGITTALCALAKT-----ESHNSQELIARVLNAVCGLKELRGKVVQE-GGVKALLRMALEGTEKGKRHATQAL 560 (810)
T ss_dssp HHHHHHHTTHHHHHHHHHTC-----CCHHHHHHHHHHHHHHHTSHHHHHHHHHT-THHHHHHHHHHSSCHHHHHHHHHHH
T ss_pred HHHHHHHCcCHHHHHHHHcC-----CCHHHHHHHHHHHHHHcCCHHHHHHHHHC-CCHHHHHHHHccCCHHHHHHHHHHH
Confidence 55666688999999999874 23456778899999998887767666654 6899999999998999999999999
Q ss_pred HHHhccCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Q psy8075 223 GAVCLIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVLSYGPGQHSLEFRLHLRYE 302 (1074)
Q Consensus 223 aavc~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN~lv~~~~~~~dl~~R~~lR~E 302 (1074)
+-+|...+- ..++.. +. .. .=..+|++.|... .....-..|++.|-|..-.+ + + .|..
T Consensus 561 ~nL~~~~~p-~~~~~~---~~-~~---~aIppLv~LL~~~----~~~l~~~eAl~AL~NLa~~~----d--~----~~~~ 618 (810)
T 3now_A 561 ARIGITINP-EVSFSG---QR-SL---DVIRPLLNLLQQD----CTALENFESLMALTNLASMN----E--S----VRQR 618 (810)
T ss_dssp HHHHHHSCH-HHHTTT---HH-HH---HTHHHHHHTTSTT----SCHHHHHHHHHHHHHHTTSC----H--H----HHHH
T ss_pred HHHhcCCCh-hhhhcc---hh-hh---cHHHHHHHHhCCC----CcHHHHHHHHHHHHHHhcCC----H--H----HHHH
Confidence 998875321 111111 00 00 0123566666421 01122235778888866532 2 2 3444
Q ss_pred HHHhCcHHHHHHHhccCchHH
Q psy8075 303 VIMLGIQPIIDKLRTHENETL 323 (1074)
Q Consensus 303 f~~~GL~~~l~~Lr~~~~~~L 323 (1074)
+...|--+.|..|-.++++.+
T Consensus 619 Ii~aG~l~~Lv~LL~s~~~~V 639 (810)
T 3now_A 619 IIKEQGVSKIEYYLMEDHLYL 639 (810)
T ss_dssp HHHTTHHHHHHHHHHSCCTTH
T ss_pred HHHcCCHHHHHHHHcCCCHHH
Confidence 666676555555544555544
No 49
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=56.79 E-value=1.1e+02 Score=27.38 Aligned_cols=72 Identities=13% Similarity=0.166 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Q psy8075 440 AAKKKADELEMENVDLSNRLAKKEQELDQKTQEKEDLDESLSRIKDRLEKETAGHLEAKQKVAELEDRISEL 511 (1074)
Q Consensus 440 ~~~~~~eel~~e~~eL~~kl~~~e~el~~k~~e~e~l~~~l~~l~~~l~~~~~~~~~~~~~~~~l~~~l~~l 511 (1074)
.+..++.+++++...+...+..++.+......+-+..-...+....++-....++.+...++.....++..|
T Consensus 22 ~L~~eL~~lEke~~~l~~el~~le~E~~~L~~eE~~~w~eyn~~~~ql~e~~dE~~Sl~~q~~~~~~qLdkL 93 (96)
T 3q8t_A 22 RLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQMQLDKL 93 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345566666666666666666665555544433333334444454455555555555555555555555443
No 50
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=56.48 E-value=42 Score=38.61 Aligned_cols=105 Identities=11% Similarity=0.107 Sum_probs=74.2
Q ss_pred HHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHH
Q psy8075 126 TRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQ 205 (1074)
Q Consensus 126 ~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~ 205 (1074)
...+..|+.....++-.| ..+++.+|+..|+.+|.. .+..++...+.||+.|..........+....+|..|+.
T Consensus 20 ~~A~~~L~~l~~~~~~~~-~~i~~~g~i~~Lv~lL~s-----~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~i~~Lv~ 93 (457)
T 1xm9_A 20 AIGAYYIQHTCFQDESAK-QQVYQLGGICKLVDLLRS-----PNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVS 93 (457)
T ss_dssp HHHHHHHHHHTSSCSSHH-HHHHHTTHHHHHHHHTTS-----SCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcCChHHH-HHHHHcCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHH
Confidence 334444444444443333 356789999999999873 23456778889999888653334444455588999999
Q ss_pred hhc-CCChhhHHHHHHHHHHHhccCCchhHHH
Q psy8075 206 SLS-TENIKTKIAVLEILGAVCLIPGGHKKVL 236 (1074)
Q Consensus 206 sL~-s~~~~tr~~v~elLaavc~~~~Gh~~VL 236 (1074)
.|. +.+..++..++-.|..+|..+.....|+
T Consensus 94 lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~ 125 (457)
T 1xm9_A 94 LLRRTGNAEIQKQLTGLLWNLSSTDELKEELI 125 (457)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHH
T ss_pred HHhhCCCHHHHHHHHHHHHHHhcCHHhHHHHH
Confidence 998 8899999999999999998765555444
No 51
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=55.91 E-value=1.2e+02 Score=27.67 Aligned_cols=37 Identities=16% Similarity=0.241 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhh
Q psy8075 476 LDESLSRIKDRLEKETAGHLEAKQKVAELEDRISELK 512 (1074)
Q Consensus 476 l~~~l~~l~~~l~~~~~~~~~~~~~~~~l~~~l~~l~ 512 (1074)
|...+.-.+.....+...+....+...+|..+++.|.
T Consensus 67 LkaQv~IY~~DF~aERadREkl~~eKe~L~~ql~~Lq 103 (110)
T 2v4h_A 67 LKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQ 103 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccchhhHHHHHhHHHHHHHHHHHHH
Confidence 4444444444444444444444455555666655443
No 52
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=55.86 E-value=1.1e+02 Score=37.97 Aligned_cols=144 Identities=14% Similarity=0.179 Sum_probs=92.5
Q ss_pred hhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCC-ChhhHHHHHHHHHHH
Q psy8075 147 FIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTE-NIKTKIAVLEILGAV 225 (1074)
Q Consensus 147 Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~-~~~tr~~v~elLaav 225 (1074)
++..+++..|+.+|.. .+..++..++.||..|..+......+...+.+|..|+..|.+. +..+|..++..|..+
T Consensus 146 ~i~~g~ip~Lv~lL~~-----~d~~vr~~A~~~L~~L~~~~~~~~~i~~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~L 220 (780)
T 2z6g_A 146 ELATRAIPELTKLLND-----EDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNL 220 (780)
T ss_dssp HHHHHHHHHHHHHHHC-----SCHHHHHHHHHHHHHHHTSHHHHHHHTTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHCC-----CCHHHHHHHHHHHHHHhCCChhHHHHHhccChHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 4556788899988872 2345677788899888887766667777788999999999754 899999999999888
Q ss_pred hccCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHH-HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Q psy8075 226 CLIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSI-KTALMSFLNAVLSYGPGQHSLEFRLHLRYEVI 304 (1074)
Q Consensus 226 c~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~-~~a~m~lIN~lv~~~~~~~dl~~R~~lR~Ef~ 304 (1074)
+..+.+...+.+ .+-...|++.|... +... ..|+..|.|...++ ++ .|..+.
T Consensus 221 s~~~~~~~~i~~-----------~g~I~~Lv~lL~~~------~~~v~~~A~~aL~nLa~~~----~~------~~~~v~ 273 (780)
T 2z6g_A 221 SHHREGLLAIFK-----------SGGIPALVNMLGSP------VDSVLFHAITTLHNLLLHQ----EG------AKMAVR 273 (780)
T ss_dssp HTSHHHHHHHHH-----------TTHHHHHHHHTTCS------CHHHHHHHHHHHHHHHHHS----TT------HHHHHH
T ss_pred hCCchhHHHHHH-----------cCCHHHHHHHHcCC------CHHHHHHHHHHHHHHhCCC----hh------hHHHHH
Confidence 775433222211 12345677777532 2223 35556677777653 22 344555
Q ss_pred HhCcHHHHHHHhccCchH
Q psy8075 305 MLGIQPIIDKLRTHENET 322 (1074)
Q Consensus 305 ~~GL~~~l~~Lr~~~~~~ 322 (1074)
..|....+-.+-...+..
T Consensus 274 ~~g~v~~Lv~lL~~~~~~ 291 (780)
T 2z6g_A 274 LAGGLQKMVALLNKTNVK 291 (780)
T ss_dssp HTTHHHHHHHGGGCCCHH
T ss_pred HcCCHHHHHHHHhcCCHH
Confidence 567665555443334433
No 53
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=55.02 E-value=1.3e+02 Score=34.50 Aligned_cols=140 Identities=14% Similarity=0.185 Sum_probs=88.0
Q ss_pred hcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcC-CChhhHHHHHHHHHHHhc
Q psy8075 149 ECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLST-ENIKTKIAVLEILGAVCL 227 (1074)
Q Consensus 149 ~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s-~~~~tr~~v~elLaavc~ 227 (1074)
..+++..|+.+|.. .+..++...+.+|..+..+......++.++.++..|...|.+ ++..++..++..|..++.
T Consensus 15 ~~~~i~~Lv~lL~~-----~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~ 89 (529)
T 1jdh_A 15 ATRAIPELTKLLND-----EDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSH 89 (529)
T ss_dssp --CHHHHHHHHHTC-----SCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT
T ss_pred hHhhHHHHHHHhCC-----CCHHHHHHHHHHHHHHHcCCccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHc
Confidence 35677788877762 244567778899999988887777888888899999998864 488899999999988777
Q ss_pred cCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHH-HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHh
Q psy8075 228 IPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSI-KTALMSFLNAVLSYGPGQHSLEFRLHLRYEVIML 306 (1074)
Q Consensus 228 ~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~-~~a~m~lIN~lv~~~~~~~dl~~R~~lR~Ef~~~ 306 (1074)
.+++...+.+ .+-...+++.|... +... ..++..+.|...+. ++ .|..+...
T Consensus 90 ~~~~~~~i~~-----------~g~i~~L~~lL~~~------~~~v~~~a~~~L~~l~~~~----~~------~~~~i~~~ 142 (529)
T 1jdh_A 90 HREGLLAIFK-----------SGGIPALVKMLGSP------VDSVLFYAITTLHNLLLHQ----EG------AKMAVRLA 142 (529)
T ss_dssp SHHHHHHHHH-----------TTHHHHHHHHTTCS------CHHHHHHHHHHHHHHHHHC----TT------HHHHHHHH
T ss_pred CchhHHHHHH-----------cCCHHHHHHHHcCC------CHHHHHHHHHHHHHHhcCC----cc------hHHHHHHc
Confidence 5432222211 12244666666432 2233 34556677766653 22 24556666
Q ss_pred CcHHHHHHHhccCc
Q psy8075 307 GIQPIIDKLRTHEN 320 (1074)
Q Consensus 307 GL~~~l~~Lr~~~~ 320 (1074)
|..+.+-.+-...+
T Consensus 143 g~i~~L~~ll~~~~ 156 (529)
T 1jdh_A 143 GGLQKMVALLNKTN 156 (529)
T ss_dssp THHHHHHHGGGCCC
T ss_pred CCHHHHHHHHhcCC
Confidence 76655544433343
No 54
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=53.62 E-value=1e+02 Score=34.32 Aligned_cols=151 Identities=13% Similarity=0.180 Sum_probs=90.2
Q ss_pred HHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhc-ChhhHHHhhcCccHHHHHHHhhcCCCh----hhHHHHH
Q psy8075 145 LRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMN-NSTGRSHVLGYPGAIDIIAQSLSTENI----KTKIAVL 219 (1074)
Q Consensus 145 ~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN-~~~G~~~vl~~~~~i~~la~sL~s~~~----~tr~~v~ 219 (1074)
..+++.+|+..|+++|..- .+.......+.+|..|-+ +......+.....+|..|+..|.+.+. .++..++
T Consensus 164 ~~i~~~G~Ip~Lv~lL~~~----~~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~ 239 (354)
T 3nmw_A 164 KTLREVGSVKALMECALEV----KKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGG 239 (354)
T ss_dssp HHHHHTTHHHHHHHHHHHC----CCHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHhcC----CCHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHH
Confidence 4556889999999986532 122345566778888877 444455565578899999999987654 3677777
Q ss_pred HHHHHHhcc-CCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHH-HHHHHHHHHHHhcCCCCCCCHHHHH
Q psy8075 220 EILGAVCLI-PGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSI-KTALMSFLNAVLSYGPGQHSLEFRL 297 (1074)
Q Consensus 220 elLaavc~~-~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~-~~a~m~lIN~lv~~~~~~~dl~~R~ 297 (1074)
-.|..+|.+ .++.+. -.++ .+.+-+..+|+.|... +... ..|+-.+-|.... +-+
T Consensus 240 ~aL~nLs~~~a~~~~~-~~~i-------~~~g~i~~Lv~lL~~~------~~~v~~~A~~aL~nLa~~------~~~--- 296 (354)
T 3nmw_A 240 GILRNVSSLIATNEDH-RQIL-------RENNCLQTLLQHLKSH------SLTIVSNACGTLWNLSAR------NPK--- 296 (354)
T ss_dssp HHHHHHHHHHTTCHHH-HHHH-------HTTTHHHHHHHHTTCS------CHHHHHHHHHHHHHHTSS------CHH---
T ss_pred HHHHHHHhhccCCHHH-HHHH-------HHcCCHHHHHHHHcCC------ChHHHHHHHHHHHHHhCC------CHH---
Confidence 777777741 111111 1111 2233466888887532 2233 3455556665332 222
Q ss_pred HHHHHHHHhCcHHHHHHHhccCchHH
Q psy8075 298 HLRYEVIMLGIQPIIDKLRTHENETL 323 (1074)
Q Consensus 298 ~lR~Ef~~~GL~~~l~~Lr~~~~~~L 323 (1074)
-|..+...|..+.|-.|-...++.+
T Consensus 297 -~~~~i~~~G~i~~Lv~LL~s~~~~i 321 (354)
T 3nmw_A 297 -DQEALWDMGAVSMLKNLIHSKHKMI 321 (354)
T ss_dssp -HHHHHHHTTHHHHHHTTTTCSSHHH
T ss_pred -HHHHHHHCCCHHHHHHHHhCCCHHH
Confidence 3566778898887776654444433
No 55
>2ets_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.25A {Staphylococcus aureus subsp} SCOP: a.24.26.1
Probab=53.40 E-value=1.3e+02 Score=28.50 Aligned_cols=64 Identities=17% Similarity=0.280 Sum_probs=42.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHH--HhCCCCCCCChhhhHHHHHHHHHHHHH
Q psy8075 912 DRFLPVMKEFLTSATCRLSEIED--------------LFQDMKTRFDRAVR--LFGEDNSSIQPEDFFVIFDTFLTTLNE 975 (1074)
Q Consensus 912 D~f~~~m~~F~~~a~~~~~~L~~--------------~~~~~~~~~~~l~~--yfGEd~~~~~~~eFF~~~~~F~~~f~~ 975 (1074)
-.|...|.+|++.+...++.... ++..+.+.++.++. ||+.-++ +.|++.|+.
T Consensus 41 ~DFy~eVKPf~d~vd~~l~eW~~~a~~~IrpkYm~~~Qie~~~eNie~lsVq~f~~~Tsk-----------KrF~e~~kS 109 (128)
T 2ets_A 41 HDFYQTVKPYTEHIDSILNEIKLHREFIIEVPYMNSRKFELLIANIEQLSVECHFKRTSR-----------KLFIEKLKS 109 (128)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHHHTHHHHTTSTTCCHHHHHHHHHHHHHHHHHTTCTTSCH-----------HHHHHHHHH
T ss_pred CCccccccchHHHHHHHHHHHHHHHHhHcCcccCCHHHHHHHHHHHHHHHHHHhCCCcch-----------hHHHHHHHH
Confidence 34888999999999888887765 33344444444432 5554443 478888888
Q ss_pred HHHHHHHHHHH
Q psy8075 976 AKLDNENMKRR 986 (1074)
Q Consensus 976 a~~en~~~~~~ 986 (1074)
+.=.+..+...
T Consensus 110 V~YtL~~i~~~ 120 (128)
T 2ets_A 110 VQYDLQNILDG 120 (128)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 87777776543
No 56
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=50.75 E-value=1.4e+02 Score=26.81 Aligned_cols=11 Identities=36% Similarity=0.492 Sum_probs=4.0
Q ss_pred HHHHHHHHHHH
Q psy8075 449 EMENVDLSNRL 459 (1074)
Q Consensus 449 ~~e~~eL~~kl 459 (1074)
+.++..|+.++
T Consensus 43 E~ei~sL~kKi 53 (101)
T 3u59_A 43 EEEQQGLQKKL 53 (101)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 57
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=50.11 E-value=1.8e+02 Score=27.82 Aligned_cols=9 Identities=0% Similarity=0.228 Sum_probs=5.1
Q ss_pred HHHHHHHHH
Q psy8075 398 LLDRLAQQL 406 (1074)
Q Consensus 398 lld~~v~qi 406 (1074)
++|.-+.+|
T Consensus 36 ~vd~km~ei 44 (138)
T 3hnw_A 36 YINNKITEF 44 (138)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 456555555
No 58
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=47.84 E-value=3.9 Score=48.60 Aligned_cols=11 Identities=9% Similarity=0.232 Sum_probs=5.6
Q ss_pred CCHHHHHHHhh
Q psy8075 639 MELEVVDKLFC 649 (1074)
Q Consensus 639 ld~~~lE~lF~ 649 (1074)
+.-++.|++-.
T Consensus 155 i~r~~ae~~L~ 165 (535)
T 2h8h_A 155 ITRRESERLLL 165 (535)
T ss_dssp CCHHHHHHHHT
T ss_pred cCHHHHHHHhc
Confidence 33455666553
No 59
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=47.70 E-value=1.9e+02 Score=27.56 Aligned_cols=7 Identities=43% Similarity=0.463 Sum_probs=2.5
Q ss_pred HHHHHHH
Q psy8075 449 EMENVDL 455 (1074)
Q Consensus 449 ~~e~~eL 455 (1074)
.++..+|
T Consensus 88 ~kE~~~l 94 (138)
T 3hnw_A 88 DKEIYDL 94 (138)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 60
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=46.54 E-value=2.4e+02 Score=28.38 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8075 441 AKKKADELEMENVDLSNRLAKKEQELDQKTQE 472 (1074)
Q Consensus 441 ~~~~~eel~~e~~eL~~kl~~~e~el~~k~~e 472 (1074)
+...++.+++...+|+.++..+..++..-+..
T Consensus 47 LE~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K 78 (189)
T 2v71_A 47 LEAQLVQAEQRNRDLQADNQRLKYEVEALKEK 78 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555554444333
No 61
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=46.35 E-value=82 Score=28.49 Aligned_cols=42 Identities=17% Similarity=0.185 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q psy8075 439 VAAKKKADELEMENVDLSNRLAKKEQELDQKTQEKEDLDESL 480 (1074)
Q Consensus 439 ~~~~~~~eel~~e~~eL~~kl~~~e~el~~k~~e~e~l~~~l 480 (1074)
..+++.++++++...+++.++.++-++++........|...+
T Consensus 33 dlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~ 74 (103)
T 4h22_A 33 DTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQF 74 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555566655555555555544444443333333333333
No 62
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=45.10 E-value=97 Score=35.83 Aligned_cols=62 Identities=11% Similarity=0.239 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC---CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy8075 885 DMTQLRNNLKEVSREIEFQRVQ---PLVPGDRFLPVMKEFLTSATCRLSEIEDLFQDMKTRFDRAVRLF 950 (1074)
Q Consensus 885 d~~~l~~~l~~~~~el~~~~~~---~~~~~D~f~~~m~~F~~~a~~~~~~L~~~~~~~~~~~~~l~~yf 950 (1074)
++..+...+..+++.+...... .....| .-..|......-+...+..+..+...+..+..-|
T Consensus 282 s~~~l~~dl~~L~~~l~~v~~~l~~~~~~~~----~~d~f~~~m~~Fl~~A~~~~~~L~~~~~~~~~~~ 346 (457)
T 3obv_E 282 SAENLQKSLDQMKKQIADVERDVQNFPAATD----EKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLY 346 (457)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHSCCCCSS----TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhccCCcc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556777777787777654321 111111 1235777777777888888888888888887776
No 63
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=44.30 E-value=80 Score=37.51 Aligned_cols=38 Identities=18% Similarity=0.365 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q psy8075 473 KEDLDESLSRIKDRLEKETAGHLEAKQKVAELEDRISE 510 (1074)
Q Consensus 473 ~e~l~~~l~~l~~~l~~~~~~~~~~~~~~~~l~~~l~~ 510 (1074)
++.+.++...++.+++.........+++...+..++.+
T Consensus 539 ~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~ 576 (597)
T 3oja_B 539 TEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQ 576 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 33333344444444444333333334444444444433
No 64
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=44.07 E-value=1.4e+02 Score=38.33 Aligned_cols=17 Identities=6% Similarity=0.085 Sum_probs=10.5
Q ss_pred HHHHHHhcCCChhHHHh
Q psy8075 53 FEELVEELDLTAPNKAA 69 (1074)
Q Consensus 53 F~~ll~~~nl~~~~~~~ 69 (1074)
+..-|+.+|++++.+..
T Consensus 308 ~~~A~~~lg~~~~e~~~ 324 (1080)
T 2dfs_A 308 TRQACTLLGISDSYQMG 324 (1080)
T ss_dssp HHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHcCCCHHHHHH
Confidence 34446667888776544
No 65
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=42.99 E-value=38 Score=37.79 Aligned_cols=98 Identities=14% Similarity=0.110 Sum_probs=67.9
Q ss_pred HHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcc------cccCCcchhHHHHHHHHHHhcChhhHHHhh-cCcc
Q psy8075 126 TRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLD------HYSGQTSLHSSIIGCIKALMNNSTGRSHVL-GYPG 198 (1074)
Q Consensus 126 ~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~------~~~~~~~~~~~~l~ClkalmN~~~G~~~vl-~~~~ 198 (1074)
...|..|... -.--+.+++.||+..|+.+|..-. .......++.....+|..|.-+......++ ....
T Consensus 53 ~~aL~nls~d-----~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~~~~k~~i~~~~G 127 (354)
T 3nmw_A 53 VCVLMKLSFD-----EEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKG 127 (354)
T ss_dssp HHHHHHHHTS-----HHHHHHHHHTTHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHCHH
T ss_pred HHHHHHHcCC-----HHHHHHHHHcCCHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCC
Confidence 4455555432 133445568999999999996311 111122356677888888886665555555 5666
Q ss_pred HHHHHHHhhcCCChhhHHHHHHHHHHHhcc
Q psy8075 199 AIDIIAQSLSTENIKTKIAVLEILGAVCLI 228 (1074)
Q Consensus 199 ~i~~la~sL~s~~~~tr~~v~elLaavc~~ 228 (1074)
+|..|+..|.+++..++..++-.|..++..
T Consensus 128 aIp~LV~LL~s~~~~v~~~A~~aL~nLs~~ 157 (354)
T 3nmw_A 128 CMRALVAQLKSESEDLQQVIASVLRNLSWR 157 (354)
T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHCCCCHHHHHHHHHHHHHHhcc
Confidence 799999999999999999999888888774
No 66
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=42.35 E-value=1.8e+02 Score=33.11 Aligned_cols=150 Identities=13% Similarity=0.106 Sum_probs=89.2
Q ss_pred hhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhc--Chhh--H-HHhhcCccHHHHHHHhhcCCChhhHHHHHHH
Q psy8075 147 FIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMN--NSTG--R-SHVLGYPGAIDIIAQSLSTENIKTKIAVLEI 221 (1074)
Q Consensus 147 Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN--~~~G--~-~~vl~~~~~i~~la~sL~s~~~~tr~~v~el 221 (1074)
+++.+++..|+.+|..-. +..+...++.+|-.|.- ..+. + +.++.....+..|...|.+.+..++..++-+
T Consensus 279 l~~~~~l~~L~~lL~~~~----~~~~~e~a~~aL~nl~~~~~~~~~~~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~a 354 (457)
T 1xm9_A 279 LYHSDAIRTYLNLMGKSK----KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASL 354 (457)
T ss_dssp GGSHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHH
T ss_pred HhCcchHHHHHHHHhhcC----CHHHHHHHHHHHHHhccCcCcchHHHHHHHHHHcCCchHHHHHHhCCCHhHHHHHHHH
Confidence 456677788888776522 12233334444554542 1221 2 4566777889999999999999999999999
Q ss_pred HHHHhccCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Q psy8075 222 LGAVCLIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVLSYGPGQHSLEFRLHLRY 301 (1074)
Q Consensus 222 Laavc~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN~lv~~~~~~~dl~~R~~lR~ 301 (1074)
|.-++..+..+..| .. +-..++|+.|..+......+.+...+++..++.|+... + + ...
T Consensus 355 L~nls~~~~~~~~i----~~--------~~i~~Lv~lL~~~~~~~~~~~~v~~~~l~~l~ni~~~~---~--~----~~~ 413 (457)
T 1xm9_A 355 LSNMSRHPLLHRVM----GN--------QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQ---P--Q----LAK 413 (457)
T ss_dssp HHHHHTSGGGHHHH----HH--------HTHHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTC---T--H----HHH
T ss_pred HHHHhcCHHHHHHH----HH--------hhhHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHhcC---H--H----HHH
Confidence 98888754433322 21 23567888886532111112345566667777777531 1 2 344
Q ss_pred HHHHhCcHHHHHHHhccC-ch
Q psy8075 302 EVIMLGIQPIIDKLRTHE-NE 321 (1074)
Q Consensus 302 Ef~~~GL~~~l~~Lr~~~-~~ 321 (1074)
.+..+|..+.|..|-.+. ++
T Consensus 414 ~i~~~g~l~~L~~L~~~~~~~ 434 (457)
T 1xm9_A 414 QYFSSSMLNNIINLCRSSASP 434 (457)
T ss_dssp HHCCHHHHHHHHHHHHCTTCH
T ss_pred HHHHcCCHHHHHHHHcCCCcH
Confidence 556667666666666555 44
No 67
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=42.27 E-value=1.1e+02 Score=36.28 Aligned_cols=42 Identities=24% Similarity=0.274 Sum_probs=17.7
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy8075 465 ELDQKTQEKEDLDESLSRIKDRLEKETAGHLEAKQKVAELED 506 (1074)
Q Consensus 465 el~~k~~e~e~l~~~l~~l~~~l~~~~~~~~~~~~~~~~l~~ 506 (1074)
+++...++.+.+++.++..++++.+...+....++++.+++.
T Consensus 538 ~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~ 579 (597)
T 3oja_B 538 ETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEA 579 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444444444444444444434443444444444443
No 68
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=41.46 E-value=2.1e+02 Score=32.99 Aligned_cols=151 Identities=13% Similarity=0.173 Sum_probs=90.0
Q ss_pred HHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhc-ChhhHHHhhcCccHHHHHHHhhcCCCh----hhHHHHH
Q psy8075 145 LRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMN-NSTGRSHVLGYPGAIDIIAQSLSTENI----KTKIAVL 219 (1074)
Q Consensus 145 ~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN-~~~G~~~vl~~~~~i~~la~sL~s~~~----~tr~~v~ 219 (1074)
..+++.+|+..|+++|..- .+..+....+.+|..|-+ +......+..+..+|..|+..|.+... .++..++
T Consensus 280 ~~I~~~GaI~~LV~lLl~s----~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~ 355 (458)
T 3nmz_A 280 KTLREVGSVKALMECALEV----KKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGG 355 (458)
T ss_dssp HHHHHTTHHHHHHHHHTTC----CSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhcC----CCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHH
Confidence 4556789999999986532 122345556777887777 555555666688899999999987654 3677777
Q ss_pred HHHHHHhcc-CCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHH-HHHHHHHHHHHhcCCCCCCCHHHHH
Q psy8075 220 EILGAVCLI-PGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSI-KTALMSFLNAVLSYGPGQHSLEFRL 297 (1074)
Q Consensus 220 elLaavc~~-~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~-~~a~m~lIN~lv~~~~~~~dl~~R~ 297 (1074)
-.|..+|.+ .++.+ .-.++- +.+-+..||..|... +... +.|+..+-|.-.. +-+
T Consensus 356 ~aL~nLs~~~a~~~~-~~~~i~-------~~G~i~~Lv~LL~~~------~~~v~~~A~~aL~nLa~~------~~~--- 412 (458)
T 3nmz_A 356 GILRNVSSLIATNED-HRQILR-------ENNCLQTLLQHLKSH------SLTIVSNACGTLWNLSAR------NPK--- 412 (458)
T ss_dssp HHHHHHHHHHTTCHH-HHHHHH-------HTTHHHHHHHHSSCS------CHHHHHHHHHHHHHHHSS------CHH---
T ss_pred HHHHHHHhcccCCHH-HHHHHH-------HcccHHHHHHHHcCC------ChHHHHHHHHHHHHHHcC------CHH---
Confidence 777777641 11111 112221 123356788877532 2223 3556666666532 222
Q ss_pred HHHHHHHHhCcHHHHHHHhccCchHH
Q psy8075 298 HLRYEVIMLGIQPIIDKLRTHENETL 323 (1074)
Q Consensus 298 ~lR~Ef~~~GL~~~l~~Lr~~~~~~L 323 (1074)
-+..+...|..+.|-.|-...++.+
T Consensus 413 -~~~~i~~~G~I~~Lv~LL~s~~~~v 437 (458)
T 3nmz_A 413 -DQEALWDMGAVSMLKNLIHSKHKMI 437 (458)
T ss_dssp -HHHHHHHHTHHHHHHTTTTCSSHHH
T ss_pred -HHHHHHHCCCHHHHHHHHhCCCHHH
Confidence 3566778898777776654444443
No 69
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=39.14 E-value=6.3 Score=52.91 Aligned_cols=14 Identities=21% Similarity=0.432 Sum_probs=8.8
Q ss_pred hhHHHHHHHHHHhc
Q psy8075 47 NELNTMFEELVEEL 60 (1074)
Q Consensus 47 ~ei~~~F~~ll~~~ 60 (1074)
..++..|+++.+++
T Consensus 929 ~~l~~E~~~l~~dr 942 (1752)
T 3h0g_A 929 DLLDEEYTQLVADR 942 (1752)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45666677666554
No 70
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=38.50 E-value=67 Score=33.58 Aligned_cols=89 Identities=18% Similarity=0.249 Sum_probs=64.9
Q ss_pred hhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhc-ChhhHHHhhcCccHHHHHHHhhc-CCChhhHHHHH
Q psy8075 142 SFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMN-NSTGRSHVLGYPGAIDIIAQSLS-TENIKTKIAVL 219 (1074)
Q Consensus 142 ~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN-~~~G~~~vl~~~~~i~~la~sL~-s~~~~tr~~v~ 219 (1074)
..-+..++.||+..|+.+|.. .+..++...+.+|+.|-- +......|. ...+|..|+..|. +.+..++..+.
T Consensus 43 ~~r~~I~~~G~Ip~LV~lL~s-----~~~~vq~~Aa~aL~nLa~~~~~nk~~I~-~~GaI~~Lv~lL~~~~~~~~~e~a~ 116 (233)
T 3tt9_A 43 EARKRVNQLRGILKLLQLLKV-----QNEDVQRAVCGALRNLVFEDNDNKLEVA-ELNGVPRLLQVLKQTRDLETKKQIT 116 (233)
T ss_dssp HHHHHHHHTTHHHHHHHGGGC-----CCHHHHHHHHHHHHHHHTTCHHHHHHHH-HTTHHHHHHHHHHHCCCHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHHhCCHHHHHHHH-HcCCHHHHHHHHccCCCHHHHHHHH
Confidence 344456688999999999864 234467777788888765 444455554 4578999999997 57899999999
Q ss_pred HHHHHHhccCCchhHHH
Q psy8075 220 EILGAVCLIPGGHKKVL 236 (1074)
Q Consensus 220 elLaavc~~~~Gh~~VL 236 (1074)
-.|..++..+.+...+.
T Consensus 117 ~aL~nLS~~~~~k~~i~ 133 (233)
T 3tt9_A 117 GLLWNLSSNDKLKNLMI 133 (233)
T ss_dssp HHHHHHHTSGGGHHHHH
T ss_pred HHHHHHHcChhhHHHHH
Confidence 88888887766555443
No 71
>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1
Probab=38.48 E-value=1.7e+02 Score=32.29 Aligned_cols=65 Identities=11% Similarity=0.239 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCC-CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy8075 885 DMTQLRNNLKEVSREIEFQRVQP-LVPGDRFLPVMKEFLTSATCRLSEIEDLFQDMKTRFDRAVRLFG 951 (1074)
Q Consensus 885 d~~~l~~~l~~~~~el~~~~~~~-~~~~D~f~~~m~~F~~~a~~~~~~L~~~~~~~~~~~~~l~~yfG 951 (1074)
++..+..++..+++.+......- ..+.. ...-..|......-+...+..+..+...|..+..-|.
T Consensus 211 s~~~l~~~l~~l~~~~~~~~~~l~~~~~~--~~~~d~f~~~m~~Fl~~a~~~~~~l~~~~~~~~~~~~ 276 (340)
T 1v9d_A 211 SAENLQKSLDQMKKQIADVERDVQNFPAA--TDEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYK 276 (340)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTCCCC--SSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcccc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888888888776543210 11110 0112357777777788888888888888888887774
No 72
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=38.23 E-value=6.7 Score=52.70 Aligned_cols=7 Identities=14% Similarity=0.482 Sum_probs=3.7
Q ss_pred HHHHHHH
Q psy8075 100 EQYIEQL 106 (1074)
Q Consensus 100 ~~yi~~L 106 (1074)
|+|++..
T Consensus 818 EfFfhtm 824 (1752)
T 3h0g_A 818 EFFFHAM 824 (1752)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 5555544
No 73
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=36.44 E-value=2.1e+02 Score=29.05 Aligned_cols=135 Identities=16% Similarity=0.172 Sum_probs=76.9
Q ss_pred hhhHHHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHH
Q psy8075 122 IKSRTRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAID 201 (1074)
Q Consensus 122 ~~~~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~ 201 (1074)
+......+..|...+.+++--+ .+-+..++..|...-.++.+..+....+.||..|.+. .|-..--..+..+.
T Consensus 29 w~~R~~a~~~L~~l~~~~~~~~------~~~~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~-l~~~~~~~~~~ilp 101 (242)
T 2qk2_A 29 WTLRKESLEVLEKLLTDHPKLE------NGEYGALVSALKKVITKDSNVVLVAMAGKCLALLAKG-LAKRFSNYASACVP 101 (242)
T ss_dssp HHHHHHHHHHHHHHHHHCSSBC------CCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHH-HGGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCC------CCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHH
Confidence 4455566777777666643111 1223334444443222123444555678888888742 22211112344677
Q ss_pred HHHHhhcCCChhhHHHHHHHHHHHhccCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHHHHHHHHHHH
Q psy8075 202 IIAQSLSTENIKTKIAVLEILGAVCLIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLN 281 (1074)
Q Consensus 202 ~la~sL~s~~~~tr~~v~elLaavc~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN 281 (1074)
.|...|..++..+|..+.+.|.+++-.. +...++.. ++..|.. .+...+..++.+|.
T Consensus 102 ~ll~~l~d~~~~vr~~a~~aL~~~~~~~-~~~~ll~~----------------l~~~l~~------~~~~vr~~~l~~l~ 158 (242)
T 2qk2_A 102 SLLEKFKEKKPNVVTALREAIDAIYAST-SLEAQQES----------------IVESLSN------KNPSVKSETALFIA 158 (242)
T ss_dssp HHHHGGGCCCHHHHHHHHHHHHHHHTTS-CHHHHHHH----------------HHHHTTC------SCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHcC-CHHHHHHH----------------HHHHHcC------CChHHHHHHHHHHH
Confidence 8888888899999999999998887642 12222222 2233321 25677888889998
Q ss_pred HHhcC
Q psy8075 282 AVLSY 286 (1074)
Q Consensus 282 ~lv~~ 286 (1074)
.++..
T Consensus 159 ~~l~~ 163 (242)
T 2qk2_A 159 RALTR 163 (242)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 87754
No 74
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=36.42 E-value=82 Score=31.94 Aligned_cols=46 Identities=9% Similarity=0.081 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCChhhhHHHHHHHHHHHHHHHHHHH
Q psy8075 929 LSEIEDLFQDMKTRFDRAVRLFGEDNSSIQPEDFFVIFDTFLTTLNEAKLDNE 981 (1074)
Q Consensus 929 ~~~L~~~~~~~~~~~~~l~~yfGEd~~~~~~~eFF~~~~~F~~~f~~a~~en~ 981 (1074)
...|+....+.++.-..++.-|++.... ..+.+|+..|+..++...
T Consensus 130 ~~~L~~a~~e~eeeS~~l~~~F~~~~~e-------~dv~~Fl~~y~~~R~~yH 175 (192)
T 2p22_C 130 KKKLEQNTKKLDEESSQLETTTRSIDSA-------DDLDQFIKNYLDIRTQYH 175 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCSCCCCH-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccc-------chHHHHHHHHHHHHHHHH
Confidence 3456666677777777788878652111 467889999988877553
No 75
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=35.93 E-value=1.8e+02 Score=26.28 Aligned_cols=34 Identities=29% Similarity=0.323 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8075 435 EEEIVAAKKKADELEMENVDLSNRLAKKEQELDQ 468 (1074)
Q Consensus 435 ~~e~~~~~~~~eel~~e~~eL~~kl~~~e~el~~ 468 (1074)
.+++..++.++++++.++..|..+...+|-+++.
T Consensus 11 ~e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~ 44 (100)
T 1go4_E 11 REEADTLRLKVEELEGERSRLEEEKRMLEAQLER 44 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4466777888888888888888888877776654
No 76
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=35.43 E-value=78 Score=29.79 Aligned_cols=62 Identities=16% Similarity=0.254 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhcChhhHHHhhcCccHH-HHHHHhhcCCChhhHHHHHHHHHHHhc---cC-----CchhHHHHHHhhH
Q psy8075 174 SSIIGCIKALMNNSTGRSHVLGYPGAI-DIIAQSLSTENIKTKIAVLEILGAVCL---IP-----GGHKKVLDAMSHY 242 (1074)
Q Consensus 174 ~~~l~ClkalmN~~~G~~~vl~~~~~i-~~la~sL~s~~~~tr~~v~elLaavc~---~~-----~Gh~~VL~Al~~~ 242 (1074)
.+.++||+.| |.+. -|++.| ..|..+|+..+..+|..+..||..++- ++ .|...|++.++..
T Consensus 24 ~Ea~~cl~eL-~~p~------f~~e~V~~~i~~alE~~~~~~~e~~~~LL~~L~~~~~is~~q~~~Gf~~v~~~l~Dl 94 (129)
T 2nsz_A 24 SEAEHCLKEL-EVPH------FHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYERIYNEIPDI 94 (129)
T ss_dssp HHHHHHHHHH-TCGG------GHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCc------cHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHhhChHh
Confidence 4688899986 3331 133433 557788988877899999999988873 22 3666666666654
No 77
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=35.26 E-value=54 Score=31.93 Aligned_cols=63 Identities=16% Similarity=0.253 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhcChhhHHHhhcCccHH-HHHHHhhcCCChhhHHHHHHHHHHHhc---cC-----CchhHHHHHHhhHH
Q psy8075 174 SSIIGCIKALMNNSTGRSHVLGYPGAI-DIIAQSLSTENIKTKIAVLEILGAVCL---IP-----GGHKKVLDAMSHYQ 243 (1074)
Q Consensus 174 ~~~l~ClkalmN~~~G~~~vl~~~~~i-~~la~sL~s~~~~tr~~v~elLaavc~---~~-----~Gh~~VL~Al~~~~ 243 (1074)
.+.++||+.| |.+. -|++.| ..|..+|+..+..+|..+..||..++- ++ .|...|++.++.+.
T Consensus 26 ~EA~~cl~EL-~~p~------f~~e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~~~is~~q~~~Gf~~vl~~ldDl~ 97 (152)
T 2ion_A 26 SEAEHCLKEL-EVPH------FHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYERIYNEIPDIN 97 (152)
T ss_dssp HHHHHHHHHH-TCGG------GHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCc------chHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHhChHhc
Confidence 4688899886 3331 233333 557788988778899999999998873 22 46777777776554
No 78
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=34.47 E-value=1.4e+02 Score=36.88 Aligned_cols=124 Identities=10% Similarity=0.196 Sum_probs=79.7
Q ss_pred HHhhhc-CcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhH-HHhhcCc--c---HHHHHHHhhcCCChhhHHH
Q psy8075 145 LRFIEC-EGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGR-SHVLGYP--G---AIDIIAQSLSTENIKTKIA 217 (1074)
Q Consensus 145 ~~Fi~~-~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~-~~vl~~~--~---~i~~la~sL~s~~~~tr~~ 217 (1074)
+..+.. +|+..|.++|.. ....++-....||-.||.+..|+ ..++.+. . .+..|+.-+++.+..+|..
T Consensus 599 ~~Ii~~~ga~~~L~~LL~s-----~n~~VrrAA~elI~NL~~~~e~i~~k~~~~~~~~~~~rL~lLV~Ll~s~D~~~r~A 673 (778)
T 3opb_A 599 KHIVSTKVYWSTIENLMLD-----ENVPLQRSTLELISNMMSHPLTIAAKFFNLENPQSLRNFNILVKLLQLSDVESQRA 673 (778)
T ss_dssp HHHHHSHHHHHHHHHGGGC-----SSHHHHHHHHHHHHHHHTSGGGTGGGTSCCSSHHHHHHHHHHHHGGGCSCHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHhC-----CCHHHHHHHHHHHHHHhCCcHHHHHHHHhhcCchhhccHHHHHHHHcCCCHHHHHH
Confidence 445553 677777777642 23346667888999999999997 4666543 3 3778988889999999999
Q ss_pred HHHHHHHHhccCCchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHHHHHHHHHHHHHhcC
Q psy8075 218 VLEILGAVCLIPGGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVLSY 286 (1074)
Q Consensus 218 v~elLaavc~~~~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN~lv~~ 286 (1074)
+.-.|+-++. |+..|.+++-.. ..-+..|++.|... .++.+++.-++.++..|++.
T Consensus 674 AagALAnLts---~~~~ia~~ll~~------~~gi~~Ll~lL~~~----~~~~~l~~R~~~~l~NL~~~ 729 (778)
T 3opb_A 674 VAAIFANIAT---TIPLIAKELLTK------KELIENAIQVFADQ----IDDIELRQRLLMLFFGLFEV 729 (778)
T ss_dssp HHHHHHHHHH---HCHHHHHHHTTC------HHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcC---CChHHHHHHHHc------cccHHHHHHHHhcc----CCCHHHHHHHHHHHHHHHHh
Confidence 9866655432 345554554321 13356777777642 13456665555666666653
No 79
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=34.34 E-value=85 Score=36.28 Aligned_cols=96 Identities=18% Similarity=0.201 Sum_probs=68.2
Q ss_pred HHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHh-cChhhHHHhhcCccHHHHHH
Q psy8075 126 TRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALM-NNSTGRSHVLGYPGAIDIIA 204 (1074)
Q Consensus 126 ~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~Clkalm-N~~~G~~~vl~~~~~i~~la 204 (1074)
+.+|..|...+..+ -...+.+++.+|+..|+.+|.. .+..++.+++.||..|. .+......++ +..+|..|.
T Consensus 355 ~~aL~nLs~~~a~~-~~~~~~i~~~G~i~~Lv~LL~~-----~~~~v~~~A~~aL~nLa~~~~~~~~~i~-~~G~I~~Lv 427 (458)
T 3nmz_A 355 GGILRNVSSLIATN-EDHRQILRENNCLQTLLQHLKS-----HSLTIVSNACGTLWNLSARNPKDQEALW-DMGAVSMLK 427 (458)
T ss_dssp HHHHHHHHHHHTTC-HHHHHHHHHTTHHHHHHHHSSC-----SCHHHHHHHHHHHHHHHSSCHHHHHHHH-HHTHHHHHH
T ss_pred HHHHHHHHhcccCC-HHHHHHHHHcccHHHHHHHHcC-----CChHHHHHHHHHHHHHHcCCHHHHHHHH-HCCCHHHHH
Confidence 44555554332223 2556778889999999998863 23346677888888887 4555665554 457899999
Q ss_pred HhhcCCChhhHHHHHHHHHHHhcc
Q psy8075 205 QSLSTENIKTKIAVLEILGAVCLI 228 (1074)
Q Consensus 205 ~sL~s~~~~tr~~v~elLaavc~~ 228 (1074)
..|.+.+.+++..++..|..++..
T Consensus 428 ~LL~s~~~~v~~~Aa~AL~nL~~~ 451 (458)
T 3nmz_A 428 NLIHSKHKMIAMGSAAALRNLMAN 451 (458)
T ss_dssp TTTTCSSHHHHHHHHHHHHHHHTC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHcC
Confidence 999999999999998888877753
No 80
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=34.27 E-value=2.9e+02 Score=25.79 Aligned_cols=11 Identities=27% Similarity=0.537 Sum_probs=4.5
Q ss_pred HHHHHHHHHHH
Q psy8075 500 KVAELEDRISE 510 (1074)
Q Consensus 500 ~~~~l~~~l~~ 510 (1074)
.+..+..++..
T Consensus 112 e~~~Lk~~led 122 (129)
T 2fxo_A 112 ECSELKRDIDD 122 (129)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33444444443
No 81
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=34.14 E-value=1.4e+02 Score=23.53 Aligned_cols=34 Identities=26% Similarity=0.245 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q psy8075 446 DELEMENVDLSNRLAKKEQELDQKTQEKEDLDES 479 (1074)
Q Consensus 446 eel~~e~~eL~~kl~~~e~el~~k~~e~e~l~~~ 479 (1074)
.+++.++..|..+..++..-+...++++..|.+.
T Consensus 12 ~~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkee 45 (51)
T 3m91_A 12 HQLEARIDSLAARNSKLMETLKEARQQLLALREE 45 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444444433333
No 82
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=33.96 E-value=6.7e+02 Score=29.80 Aligned_cols=31 Identities=26% Similarity=0.251 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8075 439 VAAKKKADELEMENVDLSNRLAKKEQELDQK 469 (1074)
Q Consensus 439 ~~~~~~~eel~~e~~eL~~kl~~~e~el~~k 469 (1074)
...+.+.+.++++...|.++..+.++..+++
T Consensus 490 ~~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~ 520 (592)
T 1f5n_A 490 EVERVKAESAQASAKMLHEMQRKNEQMMEQK 520 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555555555544444444433333
No 83
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=32.81 E-value=1.6e+02 Score=36.31 Aligned_cols=99 Identities=17% Similarity=0.177 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHhcCh-----hhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHHHHHhccCCch-hHHHHHHhhHHHHc
Q psy8075 173 HSSIIGCIKALMNNS-----TGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEILGAVCLIPGGH-KKVLDAMSHYQRFC 246 (1074)
Q Consensus 173 ~~~~l~ClkalmN~~-----~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elLaavc~~~~Gh-~~VL~Al~~~~~~~ 246 (1074)
.++.+++|--|--.. .....++.+..++..|...|.+.+..+|..++|+++.++..+.|- ..+... . .-
T Consensus 576 ~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s~n~~VrrAA~elI~NL~~~~e~i~~k~~~~----~-~~ 650 (778)
T 3opb_A 576 NYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLDENVPLQRSTLELISNMMSHPLTIAAKFFNL----E-NP 650 (778)
T ss_dssp HHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHTSGGGTGGGTSCC----S-SH
T ss_pred HHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHHhCCCHHHHHHHHHHHHHHhCCcHHHHHHHHhh----c-Cc
Confidence 456666665554443 235667787789999999999999999999999999999866542 222110 0 00
Q ss_pred ccccchHHHHHHhhhccCCccchhHHHHHH-HHHHHH
Q psy8075 247 NERSRFQGIVNDLDKSTGIYRTDVSIKTAL-MSFLNA 282 (1074)
Q Consensus 247 ~e~~RF~~lv~~l~~~~~~~~~~~~~~~a~-m~lIN~ 282 (1074)
....||..||..+.. ++.+.+.++ -.|-|.
T Consensus 651 ~~~~rL~lLV~Ll~s------~D~~~r~AAagALAnL 681 (778)
T 3opb_A 651 QSLRNFNILVKLLQL------SDVESQRAVAAIFANI 681 (778)
T ss_dssp HHHHHHHHHHHGGGC------SCHHHHHHHHHHHHHH
T ss_pred hhhccHHHHHHHHcC------CCHHHHHHHHHHHHHh
Confidence 112479999998853 345555444 344443
No 84
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=31.55 E-value=1.8e+02 Score=30.49 Aligned_cols=93 Identities=9% Similarity=0.111 Sum_probs=54.0
Q ss_pred chhHHHHHHHHHHhcCh---hhHHHhhc--CccHHHHHH-HhhcCCChhhHHHHHHHHHHHhccCCchhHHHHHHhhHHH
Q psy8075 171 SLHSSIIGCIKALMNNS---TGRSHVLG--YPGAIDIIA-QSLSTENIKTKIAVLEILGAVCLIPGGHKKVLDAMSHYQR 244 (1074)
Q Consensus 171 ~~~~~~l~ClkalmN~~---~G~~~vl~--~~~~i~~la-~sL~s~~~~tr~~v~elLaavc~~~~Gh~~VL~Al~~~~~ 244 (1074)
.++...+.||.+++..- .|...... -...+..|. .+|.+.+..+|..+++.|.++|........|++.+..
T Consensus 70 ~v~~~al~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~~~~~e~l~~--- 146 (278)
T 4ffb_C 70 VAQEQAIVALNSLIDAFASSSLKNAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSITQSVELVIP--- 146 (278)
T ss_dssp HHHHHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSSHHHHHHHGG---
T ss_pred HHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH---
Confidence 34556678888877642 11111110 011233333 5788889999999999888777654444555544432
Q ss_pred HcccccchHHHHHHhhhccCCccchhHHHHHHHHHHHHHhc
Q psy8075 245 FCNERSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVLS 285 (1074)
Q Consensus 245 ~~~e~~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN~lv~ 285 (1074)
++.. -+...+.+|+.++..++.
T Consensus 147 -------------~l~~------Knpkv~~~~l~~l~~~l~ 168 (278)
T 4ffb_C 147 -------------FFEK------KLPKLIAAAANCVYELMA 168 (278)
T ss_dssp -------------GGGC------SCHHHHHHHHHHHHHHHH
T ss_pred -------------HHhc------cCHHHHHHHHHHHHHHHH
Confidence 2221 246677888888877774
No 85
>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane fusion, viral P glycoprotein B, HSV-1, membrane; HET: NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A* 3nwd_A*
Probab=31.10 E-value=10 Score=45.17 Aligned_cols=10 Identities=0% Similarity=-0.270 Sum_probs=6.5
Q ss_pred CCCcccccCc
Q psy8075 623 NGTIWTELDE 632 (1074)
Q Consensus 623 ~~TiW~~~~~ 632 (1074)
.-|+|..+-.
T Consensus 143 ~~t~y~g~~~ 152 (703)
T 3nwa_A 143 VSQVRFGHRY 152 (703)
T ss_dssp EEEEEEETTE
T ss_pred EEEEECcEEE
Confidence 4677876644
No 86
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=30.12 E-value=2.6e+02 Score=23.90 Aligned_cols=6 Identities=33% Similarity=0.662 Sum_probs=2.2
Q ss_pred HHHHHH
Q psy8075 444 KADELE 449 (1074)
Q Consensus 444 ~~eel~ 449 (1074)
+++.++
T Consensus 21 ~~~~~e 26 (81)
T 1ic2_A 21 RAEQAE 26 (81)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 87
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=30.02 E-value=1.2e+02 Score=24.01 Aligned_cols=36 Identities=28% Similarity=0.355 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q psy8075 442 KKKADELEMENVDLSNRLAKKEQELDQKTQEKEDLD 477 (1074)
Q Consensus 442 ~~~~eel~~e~~eL~~kl~~~e~el~~k~~e~e~l~ 477 (1074)
..++..+...+..|..+++.++.++..+.||.+.|.
T Consensus 10 e~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~ 45 (58)
T 3a2a_A 10 ERQLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLN 45 (58)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666677777788888888877777777543
No 88
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=27.53 E-value=3.3e+02 Score=24.33 Aligned_cols=50 Identities=16% Similarity=0.226 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q psy8075 439 VAAKKKADELEMENVDLSNRLAKKEQELDQKTQEKEDLDESLSRIKDRLE 488 (1074)
Q Consensus 439 ~~~~~~~eel~~e~~eL~~kl~~~e~el~~k~~e~e~l~~~l~~l~~~l~ 488 (1074)
..+.++++.++.+..+...+..+.+.++......+..+...+++...+|.
T Consensus 19 e~a~drae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ 68 (101)
T 3u1c_A 19 ENALDRAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELH 68 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666555555555555555544443333333333444443333
No 89
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=27.08 E-value=1.6e+02 Score=26.18 Aligned_cols=34 Identities=21% Similarity=0.341 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q psy8075 920 EFLTSATCRLSEIEDLFQDMKTRFDRAVRLFGEDN 954 (1074)
Q Consensus 920 ~F~~~a~~~~~~L~~~~~~~~~~~~~l~~yfGEd~ 954 (1074)
.|+.-| .++..|.+..+.+++.|-..-+|+-.|.
T Consensus 59 ~FiaLA-a~l~~lH~~V~~~Ke~Yl~~rr~~~~d~ 92 (93)
T 3t98_B 59 TFVALA-AQLQSIHENVKVLKEQYLSYRKMFLGDA 92 (93)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 566666 5788999999999999999999886663
No 90
>3pgw_A U1-A; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 1fht_A 2u1a_A 2aym_A 2b0g_A
Probab=26.28 E-value=2.1e+02 Score=29.85 Aligned_cols=14 Identities=14% Similarity=0.275 Sum_probs=10.2
Q ss_pred cCCHHHHHHHhhhh
Q psy8075 638 SMELEVVDKLFCAY 651 (1074)
Q Consensus 638 ~ld~~~lE~lF~~~ 651 (1074)
..+.++|.++|+..
T Consensus 218 ~~~~~~l~~~F~~~ 231 (282)
T 3pgw_A 218 ETNELMLSMLFNQF 231 (282)
T ss_pred cCCHHHHHHHHHhc
Confidence 34668899999854
No 91
>3m91_B Prokaryotic ubiquitin-like protein PUP; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis}
Probab=26.01 E-value=25 Score=26.54 Aligned_cols=28 Identities=21% Similarity=0.483 Sum_probs=13.5
Q ss_pred HHHHHHHHhhhhccCchhhHHHhhhcCc
Q psy8075 125 RTRILDSLRTALRTQPHSFVLRFIECEG 152 (1074)
Q Consensus 125 ~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~G 152 (1074)
.-.+|..+.-.|.+|.-.||+.|+..+|
T Consensus 16 ~D~lLDeId~vLE~NAeeFV~~fVQKGG 43 (44)
T 3m91_B 16 TDDLLDEIDDVLEENAEDFVRAYVQKGG 43 (44)
T ss_dssp HHHHHHHHHHHHHHTC------------
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHccC
Confidence 3468888999999999999999998776
No 92
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=25.98 E-value=2.6e+02 Score=29.02 Aligned_cols=134 Identities=12% Similarity=0.156 Sum_probs=75.1
Q ss_pred hhhHHHHHHHHhh-hhccCchhh--HHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHH-Hhhc--
Q psy8075 122 IKSRTRILDSLRT-ALRTQPHSF--VLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRS-HVLG-- 195 (1074)
Q Consensus 122 ~~~~~~~l~~L~v-~Lrt~~~~W--v~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~-~vl~-- 195 (1074)
+..+...+..|.+ .+..++--| ..+|. .+++.|...-..+.+..+....+.||.+|. .|+. .-+.
T Consensus 30 w~eRk~al~~L~~~~~~~~~~i~~~~~~~~------~~~~~L~~~l~~D~n~~v~~~A~~al~~la---~~l~~~~f~~~ 100 (249)
T 2qk1_A 30 WKDRVEALEEFWDSVLSQTKKLKSTSQNYS------NLLGIYGHIIQKDANIQAVALAAQSVELIC---DKLKTPGFSKD 100 (249)
T ss_dssp HHHHHHHHHHHHHHTGGGCCCBCCTTCCCH------HHHHHHHHHHHHCSCHHHHHHHHHHHHHHH---HHHCTTTSCHH
T ss_pred HHHHHHHHHHHHHHHHhcCCccccCcccHH------HHHHHHHHHhccCCCHHHHHHHHHHHHHHH---HhcccccccHH
Confidence 4566778888888 776654333 22332 333333332212223334556778888877 3554 2222
Q ss_pred C-ccHHHHHHHhhcCCChhhHHHHHHHHHHHhccCC-----c-hhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccc
Q psy8075 196 Y-PGAIDIIAQSLSTENIKTKIAVLEILGAVCLIPG-----G-HKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRT 268 (1074)
Q Consensus 196 ~-~~~i~~la~sL~s~~~~tr~~v~elLaavc~~~~-----G-h~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~ 268 (1074)
| ...+..|...+......++..+...|.++|-.-+ + -+.+++ .++..|.+ .
T Consensus 101 y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~----------------~l~~~l~~------k 158 (249)
T 2qk1_A 101 YVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLK----------------DILEHMKH------K 158 (249)
T ss_dssp HHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHH----------------HHHHHTTC------S
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccccccCCcHHHHHH----------------HHHHHHcC------C
Confidence 2 2245566666777777888777777777665311 1 112222 23333432 2
Q ss_pred hhHHHHHHHHHHHHHhcC
Q psy8075 269 DVSIKTALMSFLNAVLSY 286 (1074)
Q Consensus 269 ~~~~~~a~m~lIN~lv~~ 286 (1074)
++..+.+++.+|..++..
T Consensus 159 ~~~vk~~al~~l~~~~~~ 176 (249)
T 2qk1_A 159 TPQIRMECTQLFNASMKE 176 (249)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHH
Confidence 567888999999999975
No 93
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=25.61 E-value=5.2e+02 Score=25.94 Aligned_cols=7 Identities=14% Similarity=0.354 Sum_probs=4.1
Q ss_pred chhHHHH
Q psy8075 392 HPQHWLL 398 (1074)
Q Consensus 392 ~~~~~~l 398 (1074)
-+.||+-
T Consensus 11 e~~ywk~ 17 (189)
T 2v71_A 11 ETAYWKE 17 (189)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3567763
No 94
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=25.57 E-value=3.6e+02 Score=24.03 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8075 439 VAAKKKADELEMENVDLSNRLAKKEQELDQKTQ 471 (1074)
Q Consensus 439 ~~~~~~~eel~~e~~eL~~kl~~~e~el~~k~~ 471 (1074)
..+.++++.++.+......+..+.+.++.....
T Consensus 19 e~a~d~ae~~e~~~k~~e~~~~~~E~ei~sL~k 51 (101)
T 3u59_A 19 ENAIDRAEQAEADKKQAEDRCKQLEEEQQGLQK 51 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 344555555555555555555544444444333
No 95
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=25.37 E-value=3.1e+02 Score=23.19 Aligned_cols=44 Identities=18% Similarity=0.255 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q psy8075 439 VAAKKKADELEMENVDLSNRLAKKEQELDQKTQEKEDLDESLSR 482 (1074)
Q Consensus 439 ~~~~~~~eel~~e~~eL~~kl~~~e~el~~k~~e~e~l~~~l~~ 482 (1074)
..++..+++.+.+...++..+..+-..+..+..++-++++.+.+
T Consensus 24 ~~le~~Le~s~~~q~~~~~Elk~~~e~Ld~KI~eL~elrq~Lak 67 (72)
T 3cve_A 24 SEMEQRLEKSQSEQDAFRSNLKTLLEILDGKIFELTELRDNLAK 67 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 33444444444444444444444444555555555555555443
No 96
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=25.34 E-value=3e+02 Score=23.66 Aligned_cols=46 Identities=24% Similarity=0.314 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q psy8075 438 IVAAKKKADELEMENVDLSNRLAKKEQELDQKTQEKEDLDESLSRI 483 (1074)
Q Consensus 438 ~~~~~~~~eel~~e~~eL~~kl~~~e~el~~k~~e~e~l~~~l~~l 483 (1074)
+..++..+++.+.+...++..+..+-..+..+..++-++++.+.++
T Consensus 29 v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~KI~eL~elRqgLakL 74 (79)
T 3cvf_A 29 LRAMERSLEEARAERERARAEVGRAAQLLDVSLFELSELREGLARL 74 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 3344444444444444444555555555555555555555555443
No 97
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=25.23 E-value=3.6e+02 Score=23.94 Aligned_cols=46 Identities=17% Similarity=0.266 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy8075 439 VAAKKKADELEMENVDLSNRLAKKEQELDQKTQEKEDLDESLSRIK 484 (1074)
Q Consensus 439 ~~~~~~~eel~~e~~eL~~kl~~~e~el~~k~~e~e~l~~~l~~l~ 484 (1074)
..+...+..+..+-..+..+|..++++-.....++..+......+.
T Consensus 7 ~~l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~ 52 (96)
T 3q8t_A 7 EQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLD 52 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 3344455555555556666666666655555555555444444443
No 98
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=25.17 E-value=2e+02 Score=25.74 Aligned_cols=14 Identities=50% Similarity=0.667 Sum_probs=6.0
Q ss_pred HHHHHHHhhhHHHH
Q psy8075 463 EQELDQKTQEKEDL 476 (1074)
Q Consensus 463 e~el~~k~~e~e~l 476 (1074)
+.+.....+|+|+|
T Consensus 46 E~~~~~ie~ElEeL 59 (97)
T 2eqb_B 46 EEEADKLNKEVEDL 59 (97)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33344444444443
No 99
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=24.92 E-value=2.8e+02 Score=27.75 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy8075 454 DLSNRLAKKEQELDQKTQEKEDLDESLSRIKDRL 487 (1074)
Q Consensus 454 eL~~kl~~~e~el~~k~~e~e~l~~~l~~l~~~l 487 (1074)
.|+.+...+.++++.+.+|.+.|.+++..++.+.
T Consensus 24 ~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~ 57 (190)
T 4emc_A 24 NLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQV 57 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3333333444444455555555555555554443
No 100
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=24.85 E-value=44 Score=37.11 Aligned_cols=187 Identities=11% Similarity=0.024 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhHhhHHhhhHhHHHHHHHHHHHhhcHhHHHHHHHHHHhccccCCC-----CCCCccceecccccc-cccc
Q psy8075 763 RLRCLHYKKRFHFWISDIEPKIKSVMEASREVTRSRRLRKLLELVLALGNYMNKG-----ARGNASGFRLTSLNK-LVDT 836 (1074)
Q Consensus 763 RL~~l~fk~~f~~~~~~l~~~l~~v~~A~~~l~~S~~l~~lL~~IL~iGNymN~g-----~rg~A~GFkL~sL~K-L~dt 836 (1074)
||+-++-+.+ .+++..|+.|..-...+ ++....+..++..+=|+|... ...+.|+=-.+.|-+ +..+
T Consensus 53 rLqg~Ldk~e-----r~~~~rIe~L~~~L~~~--s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i~~l 125 (390)
T 1deq_A 53 RMKGLIDEVD-----QDFTSRINKLRDSLFNY--QKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQINEDLRSRIEIL 125 (390)
T ss_pred hHHHHHHHhh-----hhHHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q ss_pred ccCCCCCcchHHHHHHHHHHhhhhccchhhhhhhHHHhhcCCHH---HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q psy8075 837 KSSSSRGVTLLHYLVELAEKRFKEVLKLEEDLCHVKEASKVSMK---ELENDMTQLRNNLKEVSREIEFQRVQPLVPGDR 913 (1074)
Q Consensus 837 Ks~~d~k~TLLhylv~~v~~~~p~ll~f~~eL~~v~~Aakvs~~---~l~~d~~~l~~~l~~~~~el~~~~~~~~~~~D~ 913 (1074)
|-+++.+...|+.|-..|++..-++..+..++..+...++++.. +..-|+..+.+..+.+.......-....+-.--
T Consensus 126 k~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~~Id~c~~~C~~sC~~~l~~~vD~e~ye~qqKQL~qv~a~~llP~~~~q~l 205 (390)
T 1deq_A 126 RRKVIEQVQRINLLQKNVRDQLVDMKRLEVDIDIKIRSCKGSCSRALEHKVDLEDYKNQQKQLEQVIAINLLPSRDIQYL 205 (390)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhhhhccHHHHHHHHHHHHhhhhhccccccccccc
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q psy8075 914 FLPVMKEFLTSATCRLSEIEDLFQDMKTRFDRAVRLFGEDNSS 956 (1074)
Q Consensus 914 f~~~m~~F~~~a~~~~~~L~~~~~~~~~~~~~l~~yfGEd~~~ 956 (1074)
-.-+|..|-..+-.+++...+....--.+|.++.+|.++....
T Consensus 206 p~LK~~p~kd~vP~~fKsq~q~a~~Ew~al~~~~Qm~~~LE~~ 248 (390)
T 1deq_A 206 PILKMSTITGPVPREFKSQLQEAPLEWKALLEMQQTKMVLETF 248 (390)
T ss_pred cccccccccccCChhhcccccccchHHHHHHhhhhheeeeccC
No 101
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=24.68 E-value=2.5e+02 Score=21.82 Aligned_cols=33 Identities=27% Similarity=0.328 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q psy8075 444 KADELEMENVDLSNRLAKKEQELDQKTQEKEDL 476 (1074)
Q Consensus 444 ~~eel~~e~~eL~~kl~~~e~el~~k~~e~e~l 476 (1074)
++..+..-+..|..++.+++..+..+.||.+.|
T Consensus 5 ~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL 37 (48)
T 3vmx_A 5 QILRLKQINIQLATKIQHLEFSCSEKEQEIERL 37 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 444455555666666666666666666665543
No 102
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=24.44 E-value=2.9e+02 Score=39.87 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=23.6
Q ss_pred HHHHHHHHHHhcCCCC-----CCCHHH-HHHHHHHHHHhCc
Q psy8075 274 TALMSFLNAVLSYGPG-----QHSLEF-RLHLRYEVIMLGI 308 (1074)
Q Consensus 274 ~a~m~lIN~lv~~~~~-----~~dl~~-R~~lR~Ef~~~GL 308 (1074)
-+.|-.||.|+++|.- .|+++. --.+|.+..+.|+
T Consensus 1718 e~FLE~IN~lL~sGEVP~LF~~dE~~~i~~~~r~~a~~~g~ 1758 (3245)
T 3vkg_A 1718 SSFLERMNTLLAGGEVPGLFEGEEFTALMHACKETAQRNGL 1758 (3245)
T ss_dssp THHHHHHHHHHHHSCCTTSSCTTTHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhccCCccccCCHHHHHHHHHHHHHHHHhcCC
Confidence 4568899999998652 234432 2346888888886
No 103
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=24.21 E-value=6.9e+02 Score=26.85 Aligned_cols=97 Identities=12% Similarity=0.077 Sum_probs=61.7
Q ss_pred hHHHHHHHHhhhhccCchhhHHHhhhcC-cHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCcc-HHH
Q psy8075 124 SRTRILDSLRTALRTQPHSFVLRFIECE-GLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPG-AID 201 (1074)
Q Consensus 124 ~~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~-Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~-~i~ 201 (1074)
...-+|.=||+.++...++ .-|.+.. |...+..++..+.... ....+..++||+--+..+..|...++.+-+ .+.
T Consensus 118 ~~fPvLDLlRl~~l~p~~~--~~~~~~~~~~~l~~~l~~~~~~~~-~p~n~ml~lR~l~NlF~~~~g~~~l~~~~~~il~ 194 (304)
T 3ebb_A 118 IVFPALDILRLSIKHPSVN--ENFCNEKEGAQFSSHLINLLNPKG-KPANQLLALRTFCNCFVGQAGQKLMMSQRESLMS 194 (304)
T ss_dssp TCHHHHHHHHHHTTSHHHH--HHHHSTTTHHHHHHHHHHTTCTTS-CHHHHHHHHHHHHHGGGSHHHHHHHHHTHHHHHH
T ss_pred hHHHHHHHHHHHHcCccHH--HHhhccccchHHHHHHHHhcCCCC-ChHHHHHHHHHHHHccCCchhHHHHHHHHHHHHH
Confidence 4567888889988866443 3355433 4444434555544322 223455667777777778899999987765 455
Q ss_pred HHHHhhcCCChhhHHHHHHHHH
Q psy8075 202 IIAQSLSTENIKTKIAVLEILG 223 (1074)
Q Consensus 202 ~la~sL~s~~~~tr~~v~elLa 223 (1074)
.++.++.+++..+++.+.=++.
T Consensus 195 ~~~~~~~~~nknl~iA~ATl~~ 216 (304)
T 3ebb_A 195 HAIELKSGSNKNIHIALATLAL 216 (304)
T ss_dssp HHHGGGSSCCHHHHHHHHHHHH
T ss_pred HHHHHhcCCChhHHHHHHHHHH
Confidence 6666667777778877777775
No 104
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=24.09 E-value=1.1e+02 Score=31.88 Aligned_cols=58 Identities=12% Similarity=0.105 Sum_probs=41.2
Q ss_pred chhHHHHHHHHHHhcChhhH-HHhh-cC-ccHHHHHHHhhcCCChhhHHHHHHHHHHHhcc
Q psy8075 171 SLHSSIIGCIKALMNNSTGR-SHVL-GY-PGAIDIIAQSLSTENIKTKIAVLEILGAVCLI 228 (1074)
Q Consensus 171 ~~~~~~l~ClkalmN~~~G~-~~vl-~~-~~~i~~la~sL~s~~~~tr~~v~elLaavc~~ 228 (1074)
.+...++.||..+.+..... ..+. .. +..+..|..+|+..+..+|..+++.|+++|-.
T Consensus 161 ~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~i~~~ 221 (249)
T 2qk1_A 161 QIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFAILIKI 221 (249)
T ss_dssp HHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 34556777777776543210 1222 23 67888999999999999999999999999863
No 105
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=23.82 E-value=3.6e+02 Score=34.72 Aligned_cols=39 Identities=28% Similarity=0.379 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q psy8075 450 MENVDLSNRLAKKEQELDQKTQEKEDLDESLSRIKDRLE 488 (1074)
Q Consensus 450 ~e~~eL~~kl~~~e~el~~k~~e~e~l~~~l~~l~~~l~ 488 (1074)
.+...|+.+++++++++....+|++.+.+....+++.|+
T Consensus 984 ~~v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~~~L~ 1022 (1080)
T 2dfs_A 984 NRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETE 1022 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444444444444444444433333
No 106
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=23.74 E-value=91 Score=30.73 Aligned_cols=45 Identities=11% Similarity=0.226 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhcChhhHHHhhcCccHHHH-HHHhhcCCChhhHHHHHHHHHHHh
Q psy8075 174 SSIIGCIKALMNNSTGRSHVLGYPGAIDI-IAQSLSTENIKTKIAVLEILGAVC 226 (1074)
Q Consensus 174 ~~~l~ClkalmN~~~G~~~vl~~~~~i~~-la~sL~s~~~~tr~~v~elLaavc 226 (1074)
.+.+.|++.+-... -|+..|.. |..+|+. +.+.|.++..||+.+|
T Consensus 27 ~Ea~~~l~eL~~p~-------~~~~~V~~~I~~aldr-k~~ere~~s~LL~~L~ 72 (165)
T 2rg8_A 27 NEVAEMLRDLNLGE-------MKSGVPVLAVSLALEG-KASHREMTSKLLSDLC 72 (165)
T ss_dssp HHHHHHHHHHTCSG-------GGGHHHHHHHHHHHTS-CHHHHHHHHHHHHHHB
T ss_pred HHHHHHHHHhCCcc-------cHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHH
Confidence 47888999854222 25555544 5567776 5788999999999986
No 107
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=22.58 E-value=3.8e+02 Score=23.20 Aligned_cols=12 Identities=33% Similarity=0.479 Sum_probs=4.7
Q ss_pred HHHHHHHHHHHH
Q psy8075 444 KADELEMENVDL 455 (1074)
Q Consensus 444 ~~eel~~e~~eL 455 (1074)
++++++.++..|
T Consensus 28 EieELKekN~~L 39 (81)
T 2jee_A 28 EIEELKEKNNSL 39 (81)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333444433333
No 108
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=22.56 E-value=2.9e+02 Score=35.86 Aligned_cols=27 Identities=11% Similarity=0.176 Sum_probs=16.7
Q ss_pred hhHHHHHHHHhhhhccCchhhHHHhhh
Q psy8075 123 KSRTRILDSLRTALRTQPHSFVLRFIE 149 (1074)
Q Consensus 123 ~~~~~~l~~L~v~Lrt~~~~Wv~~Fi~ 149 (1074)
+........|-..|=..=.+||-.-|+
T Consensus 420 ~~a~~~rdalak~lY~~lF~wlv~~iN 446 (1184)
T 1i84_S 420 EQADFAIEALAKAKFERLFRWILTRVN 446 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455666666666666677777774
No 109
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=22.53 E-value=6.1e+02 Score=26.39 Aligned_cols=25 Identities=12% Similarity=0.155 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8075 442 KKKADELEMENVDLSNRLAKKEQEL 466 (1074)
Q Consensus 442 ~~~~eel~~e~~eL~~kl~~~e~el 466 (1074)
.+++++++....++..++...+.++
T Consensus 117 ~e~ie~~~~~l~~~~~~l~~~~~~l 141 (256)
T 3na7_A 117 QNEIKRKSEKQEDLKKEMLELEKLA 141 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333333
No 110
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=22.21 E-value=3.5e+02 Score=22.76 Aligned_cols=24 Identities=25% Similarity=0.482 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy8075 445 ADELEMENVDLSNRLAKKEQELDQ 468 (1074)
Q Consensus 445 ~eel~~e~~eL~~kl~~~e~el~~ 468 (1074)
++.+..+.+++..++...++++..
T Consensus 6 v~~l~~E~eel~~klk~~~ee~~~ 29 (71)
T 1uix_A 6 VANLANEKEELNNKLKEAQEQLSR 29 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555555555443
No 111
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=22.19 E-value=1.8e+02 Score=30.79 Aligned_cols=83 Identities=18% Similarity=0.324 Sum_probs=49.1
Q ss_pred hhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHHHHHhccCC---chhHHHHHHhhHHHHccc
Q psy8075 172 LHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEILGAVCLIPG---GHKKVLDAMSHYQRFCNE 248 (1074)
Q Consensus 172 ~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elLaavc~~~~---Gh~~VL~Al~~~~~~~~e 248 (1074)
+...|+-+|..+++. .++..+.....+..+ .=..|++ -+|..++ ..+.+|+.|..+|.
T Consensus 87 l~~~~l~~L~~Ll~d--------~d~~V~K~~I~~~~~----iY~~~l~---~i~~~~~~~~~~~~~W~~m~~lK~---- 147 (257)
T 3gs3_A 87 LLPHVINVVSMLLRD--------NSAQVIKRVIQACGS----IYKNGLQ---YLCSLMEPGDSAEQAWNILSLIKA---- 147 (257)
T ss_dssp GHHHHHHHHHHHTTC--------SCHHHHHHHHHHHHH----HHHHHHH---HHTTSSSCCHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHH----HHHHHHH---HHhcCCCCcchHHHHHHHHHHHHH----
Confidence 455677778777774 234444444444322 1111222 3333332 25789999998875
Q ss_pred ccchHHHHHHhhhccCCccchhHHHHHHHHHHHHHh
Q psy8075 249 RSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVL 284 (1074)
Q Consensus 249 ~~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN~lv 284 (1074)
.+++.++. .+...+++|+-|+=.+|
T Consensus 148 -----~Il~~~~s------~n~gvkl~~iKF~e~vI 172 (257)
T 3gs3_A 148 -----QILDMIDN------ENDGIRTNAIKFLEGVV 172 (257)
T ss_dssp -----HHHHGGGS------SCHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHcc------CCcchHHHHHHHHHHHH
Confidence 45555542 35778899999999888
No 112
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=22.08 E-value=8.9e+02 Score=27.34 Aligned_cols=65 Identities=9% Similarity=0.073 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8075 877 VSMKELENDMTQLRNNLKEVSREIEFQRVQPLVPGDRFLPVMKEFLTSATCRLSEIEDLFQDMKTRFDRAVRL 949 (1074)
Q Consensus 877 vs~~~l~~d~~~l~~~l~~~~~el~~~~~~~~~~~D~f~~~m~~F~~~a~~~~~~L~~~~~~~~~~~~~l~~y 949 (1074)
..++-+.+|..++..-++.++..++... .+...+..|+.........+........+.|....+|
T Consensus 235 elleVv~~Da~EL~~V~~eL~~~~~~i~--------~~~~~~~~~l~~~~~~~~~l~~~~~~l~~~~~~~~e~ 299 (413)
T 4hpq_C 235 NLFEIVERDDKDLAAINSLLQDAAIDVA--------SFVRKVNMLLDERDADKAKMQATLSKLLTELRKHEEY 299 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcchhhHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 4567777777777666666665443321 1345666777777777777777777777777765555
No 113
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=21.82 E-value=5.6e+02 Score=24.87 Aligned_cols=69 Identities=13% Similarity=0.162 Sum_probs=45.2
Q ss_pred hHHHhhhcCcHHHHHHHHHhcccccCCcchhHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHH
Q psy8075 143 FVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEIL 222 (1074)
Q Consensus 143 Wv~~Fi~~~Gl~~L~~~L~~~~~~~~~~~~~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elL 222 (1074)
.+..+.+.+++..|+..|.. .+..+...++.+|..+ .++.++..|...|.++++.+|..++..|
T Consensus 42 ~L~~~~~~~~~~~L~~~l~~-----~~~~vr~~a~~aL~~~-----------~~~~~~~~L~~~l~~~~~~vr~~a~~aL 105 (211)
T 3ltm_A 42 ALGKIGDERAVEPLIKALKD-----EDAWVRRAAADALGQI-----------GDERAVEPLIKALKDEDGWVRQSAAVAL 105 (211)
T ss_dssp HHHHHCCGGGHHHHHHHTTC-----SCHHHHHHHHHHHHHH-----------CCGGGHHHHHHHTTCSSHHHHHHHHHHH
T ss_pred HHHHhCCccHHHHHHHHHcC-----CCHHHHHHHHHHHHhh-----------CCHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 33344444677777776642 1233344455555433 3467888889999999999999999988
Q ss_pred HHHhc
Q psy8075 223 GAVCL 227 (1074)
Q Consensus 223 aavc~ 227 (1074)
+.++.
T Consensus 106 ~~~~~ 110 (211)
T 3ltm_A 106 GQIGD 110 (211)
T ss_dssp HHHCC
T ss_pred HHhCc
Confidence 87653
No 114
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=21.66 E-value=4.2e+02 Score=38.23 Aligned_cols=43 Identities=28% Similarity=0.332 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q psy8075 438 IVAAKKKADELEMENVDLSNRLAKKEQELDQKTQEKEDLDESL 480 (1074)
Q Consensus 438 ~~~~~~~~eel~~e~~eL~~kl~~~e~el~~k~~e~e~l~~~l 480 (1074)
+....+++.+...+.++|+.+|..++.+++++.++.+++.+++
T Consensus 1922 l~~GL~KL~et~~~V~~l~~~L~~~~~~L~~k~~ea~~~l~~i 1964 (3245)
T 3vkg_A 1922 LNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQM 1964 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444566666777777777777777777777766666544443
No 115
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=21.31 E-value=7.3e+02 Score=28.03 Aligned_cols=39 Identities=10% Similarity=0.209 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy8075 452 NVDLSNRLAKKEQELDQKTQEKEDLDESLSRIKDRLEKE 490 (1074)
Q Consensus 452 ~~eL~~kl~~~e~el~~k~~e~e~l~~~l~~l~~~l~~~ 490 (1074)
...|+++|.+.++.+.+.+.....-..++..+.+.|+++
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (471)
T 3mq9_A 399 THLLQQELTEAQKGFQDVEAQAATANHTVMALMASLDAE 437 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhhcchhHHHHHHHHHHH
Confidence 344555555554444433333322222333344444433
No 116
>2hfi_A Hypothetical protein YPPE; YPPE_bacsu, GFT structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus subtilis} SCOP: a.24.26.1 PDB: 2im8_A
Probab=20.90 E-value=5.3e+02 Score=24.31 Aligned_cols=68 Identities=7% Similarity=-0.001 Sum_probs=45.2
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHH--HHHhCCCCCCCChhhhHHHHHHHH
Q psy8075 910 PGDRFLPVMKEFLTSATCRLSEIEDLFQDMK-----------------TRFDRA--VRLFGEDNSSIQPEDFFVIFDTFL 970 (1074)
Q Consensus 910 ~~D~f~~~m~~F~~~a~~~~~~L~~~~~~~~-----------------~~~~~l--~~yfGEd~~~~~~~eFF~~~~~F~ 970 (1074)
.+-.|...|.+|++.+...++........+. +.++.+ -.||+.-+++ .|+
T Consensus 32 ~e~DF~~eVKPf~d~vd~~l~~w~~~a~~~I~~~rpkY~~~~Qie~~~eNie~lsVq~f~~~TskK-----------rF~ 100 (131)
T 2hfi_A 32 HSYDFFETIKPAVEENDELAARWAEGALELIKVRRPKYVHKEQIEAVKDNFLELVLQSYVHHIHKK-----------RFK 100 (131)
T ss_dssp CCCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHHHHHHHHCCCCSH-----------HHH
T ss_pred CCCCccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhCCCcchh-----------HHH
Confidence 3445889999999999888887775544433 333333 2366666553 788
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy8075 971 TTLNEAKLDNENMKRRRE 988 (1074)
Q Consensus 971 ~~f~~a~~en~~~~~~~e 988 (1074)
+.|+.+.=++..+...-+
T Consensus 101 e~~kSV~Y~L~~i~~~i~ 118 (131)
T 2hfi_A 101 DITESVLYTLHAVKDEIA 118 (131)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888888777754433
No 117
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=20.89 E-value=1.2e+02 Score=31.16 Aligned_cols=58 Identities=12% Similarity=0.066 Sum_probs=35.1
Q ss_pred chhHHHHHHHHHHhcCh-hhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHHHHHhcc
Q psy8075 171 SLHSSIIGCIKALMNNS-TGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEILGAVCLI 228 (1074)
Q Consensus 171 ~~~~~~l~ClkalmN~~-~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elLaavc~~ 228 (1074)
.+...++.+|..++.+. ......-..+..+..|..+|..++..+|..+.+.|+.++..
T Consensus 148 ~vr~~~l~~l~~~l~~~~~~~~~~~~l~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~~ 206 (242)
T 2qk2_A 148 SVKSETALFIARALTRTQPTALNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIKL 206 (242)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Confidence 44556677777665442 11000111245677777788777888888888888777754
No 118
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=20.65 E-value=2.5e+02 Score=31.58 Aligned_cols=83 Identities=13% Similarity=0.161 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHhcChhhHHHhhcCccHHHHHHHhhcCCChhhHHHHHHHHHHHhccCC---chhHHHHHHhhHHHHcccc
Q psy8075 173 HSSIIGCIKALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEILGAVCLIPG---GHKKVLDAMSHYQRFCNER 249 (1074)
Q Consensus 173 ~~~~l~ClkalmN~~~G~~~vl~~~~~i~~la~sL~s~~~~tr~~v~elLaavc~~~~---Gh~~VL~Al~~~~~~~~e~ 249 (1074)
...|+-+|..|++. .++..+..++.|..+ .=.+|++ .+|..++ ..+.+|++|..+|.
T Consensus 98 ~~~~l~~L~~LL~d--------~d~~V~K~~I~~~ts----lYpl~f~---~i~~~~~~~~~~e~~W~~m~~lK~----- 157 (386)
T 3o2t_A 98 LLKLIANLNMLLRD--------ENVNVVKKAILTMTQ----LYKVALQ---WMVKSRVISELQEACWDMVSAMAG----- 157 (386)
T ss_dssp HHHHHHHHHHHHTC--------SSHHHHHHHHHHHHH----HHHHHHH---HHHHC-CCCHHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHcC--------CCHHHHHHHHHHHHH----HHHHHHH---HHhcCCCcchhHHHHHHHHHHHHH-----
Confidence 35566777777763 334445555554432 1122222 3344332 24689999998875
Q ss_pred cchHHHHHHhhhccCCccchhHHHHHHHHHHHHHhc
Q psy8075 250 SRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVLS 285 (1074)
Q Consensus 250 ~RF~~lv~~l~~~~~~~~~~~~~~~a~m~lIN~lv~ 285 (1074)
.+++.++. .+...+++|+-|+=.+|-
T Consensus 158 ----~Il~~~ds------~n~GVrl~aiKFle~VIl 183 (386)
T 3o2t_A 158 ----DIILLLDS------DNDGIRTHAIKFVEGLIV 183 (386)
T ss_dssp ----HHHHGGGC------SSHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHhcc------CCcchHHHHHHHHHHHHH
Confidence 45555432 357788999999988883
Done!