Your job contains 1 sequence.
>psy8077
MTSTKPPKVAIKSVQVFGRKPPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEM
IEPKLLQYKLQEPILLLGTKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILL
LGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTL
TLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8077
(223 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0034743 - symbol:RpS16 "Ribosomal protein S16" spe... 377 8.3e-35 1
UNIPROTKB|E1BAT6 - symbol:E1BAT6 "Uncharacterized protein... 337 2.1e-34 2
UNIPROTKB|K7GSD9 - symbol:K7GSD9 "Uncharacterized protein... 359 6.7e-33 1
UNIPROTKB|F1NBU1 - symbol:RPS16 "Uncharacterized protein"... 357 1.1e-32 1
UNIPROTKB|Q3T0X6 - symbol:RPS16 "40S ribosomal protein S1... 354 2.3e-32 1
UNIPROTKB|F1PKR6 - symbol:RPS16 "Uncharacterized protein"... 354 2.3e-32 1
UNIPROTKB|P62249 - symbol:RPS16 "40S ribosomal protein S1... 354 2.3e-32 1
UNIPROTKB|Q29201 - symbol:RPS16 "40S ribosomal protein S1... 354 2.3e-32 1
MGI|MGI:98118 - symbol:Rps16 "ribosomal protein S16" spec... 354 2.3e-32 1
RGD|621031 - symbol:Rps16 "ribosomal protein S16" species... 354 2.3e-32 1
UNIPROTKB|F8WFW6 - symbol:Rps16 "40S ribosomal protein S1... 354 2.3e-32 1
UNIPROTKB|F1SEG5 - symbol:F1SEG5 "Uncharacterized protein... 354 2.3e-32 1
ZFIN|ZDB-GENE-050506-107 - symbol:rps16 "ribosomal protei... 351 4.7e-32 1
UNIPROTKB|F1SP46 - symbol:RPS16 "40S ribosomal protein S1... 342 4.2e-31 1
TAIR|locus:2052120 - symbol:AT2G09990 species:3702 "Arabi... 296 2.3e-29 2
TAIR|locus:2146273 - symbol:AT5G18380 species:3702 "Arabi... 295 3.7e-29 2
TAIR|locus:2103035 - symbol:AT3G04230 species:3702 "Arabi... 291 1.6e-28 2
POMBASE|SPAC664.04c - symbol:rps1602 "40S ribosomal prote... 317 1.9e-28 1
POMBASE|SPBC18H10.14 - symbol:rps1601 "40S ribosomal prot... 317 1.9e-28 1
ASPGD|ASPL0000000085 - symbol:AN9468 species:162425 "Emer... 315 3.1e-28 1
WB|WBGene00004485 - symbol:rps-16 species:6239 "Caenorhab... 313 5.0e-28 1
UNIPROTKB|Q22054 - symbol:rps-16 "40S ribosomal protein S... 313 5.0e-28 1
UNIPROTKB|K7GLK5 - symbol:K7GLK5 "Uncharacterized protein... 228 4.0e-26 2
SGD|S000004751 - symbol:RPS16A "Protein component of the ... 289 1.8e-25 1
SGD|S000002241 - symbol:RPS16B "Protein component of the ... 289 1.8e-25 1
UNIPROTKB|G4N5Q4 - symbol:MGG_12892 "40S ribosomal protei... 280 1.6e-24 1
UNIPROTKB|K7GKC0 - symbol:K7GKC0 "Uncharacterized protein... 277 3.3e-24 1
UNIPROTKB|Q6IPX4 - symbol:RPS16 "40S ribosomal protein S1... 275 5.3e-24 1
DICTYBASE|DDB_G0284093 - symbol:rps16 "40S ribosomal prot... 268 2.9e-23 1
GENEDB_PFALCIPARUM|PF08_0076 - symbol:PF08_0076 "40S ribo... 228 5.1e-19 1
UNIPROTKB|F1LUQ7 - symbol:F1LUQ7 "Uncharacterized protein... 152 3.3e-12 2
UNIPROTKB|K7GMA5 - symbol:K7GMA5 "Uncharacterized protein... 160 8.2e-12 1
UNIPROTKB|K7GQD9 - symbol:K7GQD9 "Uncharacterized protein... 157 1.7e-11 1
UNIPROTKB|K7GRX5 - symbol:K7GRX5 "Uncharacterized protein... 156 2.2e-11 1
TIGR_CMR|CHY_2273 - symbol:CHY_2273 "ribosomal protein S9... 111 2.8e-06 1
TIGR_CMR|BA_0144 - symbol:BA_0144 "ribosomal protein S9" ... 106 1.0e-05 1
TIGR_CMR|SO_3939 - symbol:SO_3939 "ribosomal protein S9" ... 104 1.7e-05 1
TIGR_CMR|CJE_1652 - symbol:CJE_1652 "ribosomal protein S9... 101 3.8e-05 1
UNIPROTKB|Q9KUF0 - symbol:rpsI "30S ribosomal protein S9"... 95 0.00018 1
TIGR_CMR|VC_0571 - symbol:VC_0571 "ribosomal protein S9" ... 95 0.00018 1
TIGR_CMR|GSU_2875 - symbol:GSU_2875 "ribosomal protein S9... 95 0.00018 1
TIGR_CMR|CBU_1748 - symbol:CBU_1748 "ribosomal protein S9... 99 0.00025 1
UNIPROTKB|P0A7X3 - symbol:rpsI "30S ribosomal subunit pro... 94 0.00046 1
>FB|FBgn0034743 [details] [associations]
symbol:RpS16 "Ribosomal protein S16" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS;IDA] [GO:0005811
"lipid particle" evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0007052
"mitotic spindle organization" evidence=IMP] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 EMBL:AE013599
GO:GO:0005811 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0000022 eggNOG:COG0103 PANTHER:PTHR21569
KO:K02960 OMA:GGGFMGQ GeneTree:ENSGT00390000013067 CTD:6217
EMBL:AY070671 RefSeq:NP_611685.1 UniGene:Dm.7604
ProteinModelPortal:Q9W237 SMR:Q9W237 MINT:MINT-900418 STRING:Q9W237
PaxDb:Q9W237 PRIDE:Q9W237 EnsemblMetazoa:FBtr0071855 GeneID:37580
KEGG:dme:Dmel_CG4046 FlyBase:FBgn0034743 InParanoid:Q9W237
OrthoDB:EOG4PRR75 PhylomeDB:Q9W237 ChiTaRS:RPS16 GenomeRNAi:37580
NextBio:804391 Bgee:Q9W237 GermOnline:CG4046 Uniprot:Q9W237
Length = 148
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 86/142 (60%), Positives = 101/142 (71%)
Query: 66 LQYKLQEPIL---LLGTK-SATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLL 121
+Q K +EP+ + G K +ATAVAYCK G G L+V+GRPLE IEPK+LQYKLQEP+LLL
Sbjct: 1 MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60
Query: 122 GKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLT 181
GK+KFAGVDIRVRV+GGGHVAQIYAIRQAISKALVA+YQK + +LV+ T
Sbjct: 61 GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRT 120
Query: 182 LLGKD-------KFAGVDIRVR 196
LL D KF G R R
Sbjct: 121 LLVGDPRRCEPKKFGGPGARAR 142
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 42/60 (70%), Positives = 51/60 (85%)
Query: 26 IKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTKSATAV 85
+++VQVFGRKK+ATAVAYCK G G L+V+GRPLE IEPK+LQYKLQEP+LLLG + V
Sbjct: 9 VQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAGV 68
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 53/93 (56%), Positives = 64/93 (68%)
Query: 143 QIYAIRQAISKALVAYYQKCKQATGLLGTE---------KML---VKSTLTLLGKDKFAG 190
Q++ R+ + A VAY CK+ GLL K+L ++ L LLGK+KFAG
Sbjct: 13 QVFG-RKKTATA-VAY---CKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAG 67
Query: 191 VDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
VDIRVRV+GGGHVAQIYAIRQAISKALVA+YQK
Sbjct: 68 VDIRVRVSGGGHVAQIYAIRQAISKALVAFYQK 100
>UNIPROTKB|E1BAT6 [details] [associations]
symbol:E1BAT6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569 OMA:RSEPKKF
GeneTree:ENSGT00390000013067 EMBL:DAAA02009362 IPI:IPI00701999
Ensembl:ENSBTAT00000002015 NextBio:20870670 Uniprot:E1BAT6
Length = 145
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 74/124 (59%), Positives = 89/124 (71%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLGK++FA VDIRVRV GGG
Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFA-VDIRVRVKGGG 75
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD-------KFAGVD 192
HVAQIYAIRQ+ISKALVAYYQK + ++++ TLL D KF G
Sbjct: 76 HVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDIIIQYDRTLLVADPRRCESKKFGGPG 135
Query: 193 IRVR 196
R R
Sbjct: 136 ARAR 139
Score = 211 (79.3 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 43/65 (66%), Positives = 52/65 (80%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTK 80
P K ++SVQVFG KK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLG K
Sbjct: 2 PSKGPLQSVQVFGHKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLG-K 60
Query: 81 SATAV 85
AV
Sbjct: 61 ERFAV 65
Score = 178 (67.7 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 37/42 (88%), Positives = 40/42 (95%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
LLGK++FA VDIRVRV GGGHVAQIYAIRQ+ISKALVAYYQK
Sbjct: 57 LLGKERFA-VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQK 97
>UNIPROTKB|K7GSD9 [details] [associations]
symbol:K7GSD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569
GeneTree:ENSGT00390000013067 EMBL:FP236263
Ensembl:ENSSSCT00000032834 Uniprot:K7GSD9
Length = 145
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 77/126 (61%), Positives = 91/126 (72%)
Query: 78 GTKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNG 137
G K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLGK++FAGVDIRVRV G
Sbjct: 14 GRKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKG 73
Query: 138 GGHVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD-------KFAG 190
GGHVAQIYAIRQ+ISKALVAYYQK + +L++ TLL D KF G
Sbjct: 74 GGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGG 133
Query: 191 VDIRVR 196
R R
Sbjct: 134 PGARAR 139
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 38/42 (90%), Positives = 41/42 (97%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
LLGK++FAGVDIRVRV GGGHVAQIYAIRQ+ISKALVAYYQK
Sbjct: 56 LLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQK 97
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTK 80
P K + FGRK +ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLG +
Sbjct: 2 PSKGLYSRCRSFGRK-TATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKE 60
Query: 81 SATAV 85
V
Sbjct: 61 RFAGV 65
>UNIPROTKB|F1NBU1 [details] [associations]
symbol:RPS16 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006364 GO:GO:0042274 GO:GO:0022627
PANTHER:PTHR21569 OMA:GGGFMGQ GeneTree:ENSGT00390000013067
EMBL:AADN02009764 IPI:IPI00596234 Ensembl:ENSGALT00000016819
Uniprot:F1NBU1
Length = 172
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 77/124 (62%), Positives = 90/124 (72%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLGK++FAGVDIRVRV GGG
Sbjct: 43 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGG 102
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD-------KFAGVD 192
HVAQIYAIRQAISKALVAYYQK + +L++ TLL D KF G
Sbjct: 103 HVAQIYAIRQAISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPG 162
Query: 193 IRVR 196
R R
Sbjct: 163 ARAR 166
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTK 80
P K ++SVQVFGRKK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLG +
Sbjct: 28 PAKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKE 87
Query: 81 SATAV 85
V
Sbjct: 88 RFAGV 92
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 39/42 (92%), Positives = 41/42 (97%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
LLGK++FAGVDIRVRV GGGHVAQIYAIRQAISKALVAYYQK
Sbjct: 83 LLGKERFAGVDIRVRVKGGGHVAQIYAIRQAISKALVAYYQK 124
>UNIPROTKB|Q3T0X6 [details] [associations]
symbol:RPS16 "40S ribosomal protein S16" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103 PANTHER:PTHR21569
HOGENOM:HOG000019803 KO:K02960 OMA:GGGFMGQ
GeneTree:ENSGT00390000013067 EMBL:BC102215 IPI:IPI00714445
RefSeq:NP_001028796.1 UniGene:Bt.59450 ProteinModelPortal:Q3T0X6
SMR:Q3T0X6 STRING:Q3T0X6 PRIDE:Q3T0X6 Ensembl:ENSBTAT00000028093
GeneID:506297 KEGG:bta:506297 CTD:6217 HOVERGEN:HBG055171
InParanoid:Q3T0X6 OrthoDB:EOG4XWG03 NextBio:20867545 Uniprot:Q3T0X6
Length = 146
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 76/124 (61%), Positives = 90/124 (72%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLGK++FAGVDIRVRV GGG
Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGG 76
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD-------KFAGVD 192
HVAQIYAIRQ+ISKALVAYYQK + +L++ TLL D KF G
Sbjct: 77 HVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPG 136
Query: 193 IRVR 196
R R
Sbjct: 137 ARAR 140
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTK 80
P K ++SVQVFGRKK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLG +
Sbjct: 2 PSKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKE 61
Query: 81 SATAV 85
V
Sbjct: 62 RFAGV 66
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 38/42 (90%), Positives = 41/42 (97%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
LLGK++FAGVDIRVRV GGGHVAQIYAIRQ+ISKALVAYYQK
Sbjct: 57 LLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQK 98
>UNIPROTKB|F1PKR6 [details] [associations]
symbol:RPS16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006364 GO:GO:0042274 GO:GO:0022627
PANTHER:PTHR21569 OMA:GGGFMGQ GeneTree:ENSGT00390000013067
EMBL:AAEX03000956 Ensembl:ENSCAFT00000008872 Uniprot:F1PKR6
Length = 160
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 76/124 (61%), Positives = 90/124 (72%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLGK++FAGVDIRVRV GGG
Sbjct: 31 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGG 90
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD-------KFAGVD 192
HVAQIYAIRQ+ISKALVAYYQK + +L++ TLL D KF G
Sbjct: 91 HVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPG 150
Query: 193 IRVR 196
R R
Sbjct: 151 ARAR 154
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTK 80
P K ++SVQVFGRKK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLG +
Sbjct: 16 PSKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKE 75
Query: 81 SATAV 85
V
Sbjct: 76 RFAGV 80
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 38/42 (90%), Positives = 41/42 (97%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
LLGK++FAGVDIRVRV GGGHVAQIYAIRQ+ISKALVAYYQK
Sbjct: 71 LLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQK 112
>UNIPROTKB|P62249 [details] [associations]
symbol:RPS16 "40S ribosomal protein S16" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=NAS;IDA] [GO:0006412 "translation" evidence=IC;NAS;TAS]
[GO:0015935 "small ribosomal subunit" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IMP] [GO:0042274 "ribosomal small
subunit biogenesis" evidence=IMP] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006413 "translational initiation"
evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS]
[GO:0006415 "translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 EMBL:CH471126
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006364 GO:GO:0042274
GO:GO:0006415 GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0019083 eggNOG:COG0103 PANTHER:PTHR21569
HOGENOM:HOG000019803 KO:K02960 OMA:GGGFMGQ CTD:6217
HOVERGEN:HBG055171 OrthoDB:EOG4XWG03 ChiTaRS:RPS16 EMBL:M60854
EMBL:AB061841 EMBL:AK315498 EMBL:BC004324 EMBL:BC007977
IPI:IPI00221092 PIR:A39760 RefSeq:NP_001011.1 UniGene:Hs.397609
ProteinModelPortal:P62249 SMR:P62249 IntAct:P62249
MINT:MINT-5001167 STRING:P62249 PhosphoSite:P62249 DMDM:50403607
PaxDb:P62249 PeptideAtlas:P62249 PRIDE:P62249 DNASU:6217
Ensembl:ENST00000251453 GeneID:6217 KEGG:hsa:6217 UCSC:uc002olk.3
GeneCards:GC19M039923 H-InvDB:HIX0212796 HGNC:HGNC:10396 MIM:603675
neXtProt:NX_P62249 PharmGKB:PA34796 GenomeRNAi:6217 NextBio:24141
ArrayExpress:P62249 Bgee:P62249 CleanEx:HS_RPS16
Genevestigator:P62249 GermOnline:ENSG00000105193 Uniprot:P62249
Length = 146
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 76/124 (61%), Positives = 90/124 (72%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLGK++FAGVDIRVRV GGG
Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGG 76
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD-------KFAGVD 192
HVAQIYAIRQ+ISKALVAYYQK + +L++ TLL D KF G
Sbjct: 77 HVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPG 136
Query: 193 IRVR 196
R R
Sbjct: 137 ARAR 140
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTK 80
P K ++SVQVFGRKK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLG +
Sbjct: 2 PSKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKE 61
Query: 81 SATAV 85
V
Sbjct: 62 RFAGV 66
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 38/42 (90%), Positives = 41/42 (97%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
LLGK++FAGVDIRVRV GGGHVAQIYAIRQ+ISKALVAYYQK
Sbjct: 57 LLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQK 98
>UNIPROTKB|Q29201 [details] [associations]
symbol:RPS16 "40S ribosomal protein S16" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=ISS]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 eggNOG:COG0103
PANTHER:PTHR21569 HOGENOM:HOG000019803 KO:K02960 OMA:GGGFMGQ
GeneTree:ENSGT00390000013067 CTD:6217 HOVERGEN:HBG055171
OrthoDB:EOG4XWG03 EMBL:F14526 EMBL:AY550068 RefSeq:NP_001131092.1
RefSeq:XP_003355952.1 RefSeq:XP_003355953.1 RefSeq:XP_003355954.1
UniGene:Ssc.16651 ProteinModelPortal:Q29201 SMR:Q29201
STRING:Q29201 PRIDE:Q29201 Ensembl:ENSSSCT00000024602
GeneID:100623279 GeneID:414397 KEGG:ssc:100623279 KEGG:ssc:414397
Uniprot:Q29201
Length = 146
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 76/124 (61%), Positives = 90/124 (72%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLGK++FAGVDIRVRV GGG
Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGG 76
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD-------KFAGVD 192
HVAQIYAIRQ+ISKALVAYYQK + +L++ TLL D KF G
Sbjct: 77 HVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPG 136
Query: 193 IRVR 196
R R
Sbjct: 137 ARAR 140
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTK 80
P K ++SVQVFGRKK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLG +
Sbjct: 2 PSKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKE 61
Query: 81 SATAV 85
V
Sbjct: 62 RFAGV 66
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 38/42 (90%), Positives = 41/42 (97%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
LLGK++FAGVDIRVRV GGGHVAQIYAIRQ+ISKALVAYYQK
Sbjct: 57 LLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQK 98
>MGI|MGI:98118 [details] [associations]
symbol:Rps16 "ribosomal protein S16" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=ISO] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0042274 "ribosomal small subunit biogenesis" evidence=ISO]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
MGI:MGI:98118 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006364 GO:GO:0042274 GO:GO:0022627
GO:GO:0015935 eggNOG:COG0103 PANTHER:PTHR21569 KO:K02960
OMA:GGGFMGQ GeneTree:ENSGT00390000013067 CTD:6217
HOVERGEN:HBG055171 OrthoDB:EOG4XWG03 EMBL:M11408 EMBL:AK010613
EMBL:AK010641 EMBL:AK011060 EMBL:AK019400 EMBL:AK083946
EMBL:AK088413 EMBL:AK088716 EMBL:AK150808 EMBL:AK168207
EMBL:AK169328 IPI:IPI00469918 PIR:S11623 RefSeq:NP_038675.2
UniGene:Mm.702 ProteinModelPortal:P14131 SMR:P14131 IntAct:P14131
STRING:P14131 PhosphoSite:P14131 PaxDb:P14131 PRIDE:P14131
Ensembl:ENSMUST00000082134 GeneID:20055 KEGG:mmu:20055
InParanoid:P14131 NextBio:297567 Bgee:P14131 CleanEx:MM_RPS16
Genevestigator:P14131 GermOnline:ENSMUSG00000037563
GermOnline:ENSMUSG00000060419 Uniprot:P14131
Length = 146
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 76/124 (61%), Positives = 90/124 (72%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLGK++FAGVDIRVRV GGG
Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGG 76
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD-------KFAGVD 192
HVAQIYAIRQ+ISKALVAYYQK + +L++ TLL D KF G
Sbjct: 77 HVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPG 136
Query: 193 IRVR 196
R R
Sbjct: 137 ARAR 140
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTK 80
P K ++SVQVFGRKK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLG +
Sbjct: 2 PSKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKE 61
Query: 81 SATAV 85
V
Sbjct: 62 RFAGV 66
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 38/42 (90%), Positives = 41/42 (97%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
LLGK++FAGVDIRVRV GGGHVAQIYAIRQ+ISKALVAYYQK
Sbjct: 57 LLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQK 98
>RGD|621031 [details] [associations]
symbol:Rps16 "ribosomal protein S16" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003723 "RNA binding" evidence=ISO;TAS] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0015935 "small
ribosomal subunit" evidence=ISO;ISS] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISO;IDA] [GO:0042274 "ribosomal small
subunit biogenesis" evidence=ISO] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 RGD:621031
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006364
GO:GO:0042274 GO:GO:0022627 eggNOG:COG0103 PANTHER:PTHR21569
KO:K02960 CTD:6217 HOVERGEN:HBG055171 OrthoDB:EOG4XWG03 EMBL:X17665
IPI:IPI00421451 PIR:S09041 RefSeq:NP_001162617.1 UniGene:Rn.29791
ProteinModelPortal:P62250 SMR:P62250 IntAct:P62250 STRING:P62250
PhosphoSite:P62250 PRIDE:P62250 GeneID:140655 KEGG:rno:140655
UCSC:RGD:621031 InParanoid:P62250 NextBio:620612
ArrayExpress:P62250 Genevestigator:P62250
GermOnline:ENSRNOG00000019578 Uniprot:P62250
Length = 146
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 76/124 (61%), Positives = 90/124 (72%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLGK++FAGVDIRVRV GGG
Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGG 76
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD-------KFAGVD 192
HVAQIYAIRQ+ISKALVAYYQK + +L++ TLL D KF G
Sbjct: 77 HVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPG 136
Query: 193 IRVR 196
R R
Sbjct: 137 ARAR 140
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTK 80
P K ++SVQVFGRKK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLG +
Sbjct: 2 PSKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKE 61
Query: 81 SATAV 85
V
Sbjct: 62 RFAGV 66
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 38/42 (90%), Positives = 41/42 (97%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
LLGK++FAGVDIRVRV GGGHVAQIYAIRQ+ISKALVAYYQK
Sbjct: 57 LLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQK 98
>UNIPROTKB|F8WFW6 [details] [associations]
symbol:Rps16 "40S ribosomal protein S16" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 RGD:621031
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR21569 GeneTree:ENSGT00390000013067 IPI:IPI00421451
PRIDE:F8WFW6 Ensembl:ENSRNOT00000026576 Uniprot:F8WFW6
Length = 172
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 76/124 (61%), Positives = 90/124 (72%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLGK++FAGVDIRVRV GGG
Sbjct: 43 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGG 102
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD-------KFAGVD 192
HVAQIYAIRQ+ISKALVAYYQK + +L++ TLL D KF G
Sbjct: 103 HVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPG 162
Query: 193 IRVR 196
R R
Sbjct: 163 ARAR 166
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTK 80
P K ++SVQVFGRKK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLG +
Sbjct: 28 PSKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKE 87
Query: 81 SATAV 85
V
Sbjct: 88 RFAGV 92
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 38/42 (90%), Positives = 41/42 (97%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
LLGK++FAGVDIRVRV GGGHVAQIYAIRQ+ISKALVAYYQK
Sbjct: 83 LLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQK 124
>UNIPROTKB|F1SEG5 [details] [associations]
symbol:F1SEG5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569 OMA:RSEPKKF
EMBL:FP236263 Ensembl:ENSSSCT00000011719 Uniprot:F1SEG5
Length = 146
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 76/124 (61%), Positives = 90/124 (72%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLGK++FAGVDIRVRV GGG
Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGG 76
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD-------KFAGVD 192
HVAQIYAIRQ+ISKALVAYYQK + +L++ TLL D KF G
Sbjct: 77 HVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPG 136
Query: 193 IRVR 196
R R
Sbjct: 137 ARAR 140
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 38/42 (90%), Positives = 41/42 (97%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
LLGK++FAGVDIRVRV GGGHVAQIYAIRQ+ISKALVAYYQK
Sbjct: 57 LLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQK 98
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTK 80
P K + FGRKK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLG +
Sbjct: 2 PSKGLYSRCRSFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKE 61
Query: 81 SATAV 85
V
Sbjct: 62 RFAGV 66
>ZFIN|ZDB-GENE-050506-107 [details] [associations]
symbol:rps16 "ribosomal protein S16" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
ZFIN:ZDB-GENE-050506-107 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0103 PANTHER:PTHR21569
HOGENOM:HOG000019803 KO:K02960 OMA:GGGFMGQ
GeneTree:ENSGT00390000013067 CTD:6217 HOVERGEN:HBG055171
OrthoDB:EOG4XWG03 EMBL:BX569790 EMBL:BC122271 IPI:IPI00633389
RefSeq:NP_001070200.1 UniGene:Dr.24686 SMR:Q1LWH1 STRING:Q1LWH1
Ensembl:ENSDART00000066898 GeneID:767765 KEGG:dre:767765
InParanoid:Q1LWH1 NextBio:20918149 Uniprot:Q1LWH1
Length = 146
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 76/124 (61%), Positives = 89/124 (71%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK G G ++V+GRPLEMIEP LQYKL EP+LLLGK++FAGVDIRVRV GGG
Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPVTLQYKLLEPLLLLGKERFAGVDIRVRVKGGG 76
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD-------KFAGVD 192
HVAQ+YAIRQAISKALVAYYQK + +L++ TLL D KF G
Sbjct: 77 HVAQVYAIRQAISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPG 136
Query: 193 IRVR 196
R R
Sbjct: 137 ARAR 140
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 42/65 (64%), Positives = 51/65 (78%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTK 80
P K ++SVQVFGRKK+ATAVA+CK G G ++V+GRPLEMIEP LQYKL EP+LLLG +
Sbjct: 2 PAKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPVTLQYKLLEPLLLLGKE 61
Query: 81 SATAV 85
V
Sbjct: 62 RFAGV 66
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 39/44 (88%), Positives = 42/44 (95%)
Query: 180 LTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
L LLGK++FAGVDIRVRV GGGHVAQ+YAIRQAISKALVAYYQK
Sbjct: 55 LLLLGKERFAGVDIRVRVKGGGHVAQVYAIRQAISKALVAYYQK 98
>UNIPROTKB|F1SP46 [details] [associations]
symbol:RPS16 "40S ribosomal protein S16" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006364 GO:GO:0042274
GO:GO:0022627 PANTHER:PTHR21569 GeneTree:ENSGT00390000013067
EMBL:CU062655 Ensembl:ENSSSCT00000005976 OMA:SATRMES Uniprot:F1SP46
Length = 146
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 74/124 (59%), Positives = 88/124 (70%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLGK++FAGVDI VRV GGG
Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKEQFAGVDIHVRVKGGG 76
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD-------KFAGVD 192
HVAQIYAIRQ+ISKAL AYYQK + +L++ TLL D KF G
Sbjct: 77 HVAQIYAIRQSISKALAAYYQKYVDEAFKKEVKDILIQYDRTLLVADPRPCESKKFGGPG 136
Query: 193 IRVR 196
R R
Sbjct: 137 ARAR 140
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 41/65 (63%), Positives = 52/65 (80%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTK 80
P K ++S+QVFGRKK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLG +
Sbjct: 2 PSKGPLQSMQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKE 61
Query: 81 SATAV 85
V
Sbjct: 62 QFAGV 66
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 36/42 (85%), Positives = 39/42 (92%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
LLGK++FAGVDI VRV GGGHVAQIYAIRQ+ISKAL AYYQK
Sbjct: 57 LLGKEQFAGVDIHVRVKGGGHVAQIYAIRQSISKALAAYYQK 98
>TAIR|locus:2052120 [details] [associations]
symbol:AT2G09990 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISS;IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 GO:GO:0009506 GO:GO:0005618 GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0006412
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 eggNOG:COG0103
PANTHER:PTHR21569 EMBL:AC006586 EMBL:AF370576 EMBL:AY086902
IPI:IPI00545691 PIR:E84489 RefSeq:NP_178826.1 UniGene:At.48467
UniGene:At.72563 ProteinModelPortal:Q9SK22 SMR:Q9SK22 STRING:Q9SK22
PaxDb:Q9SK22 PRIDE:Q9SK22 EnsemblPlants:AT2G09990.1 GeneID:815456
KEGG:ath:AT2G09990 GeneFarm:788 TAIR:At2g09990 HOGENOM:HOG000019803
InParanoid:Q9SK22 KO:K02960 OMA:GGGFMGQ PhylomeDB:Q9SK22
ProtClustDB:PLN00210 Genevestigator:Q9SK22 GermOnline:AT2G09990
Uniprot:Q9SK22
Length = 146
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 56/107 (52%), Positives = 81/107 (75%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+A AV +CK G G ++++G P+E+ +P++L++K+ EPILLLGK +FAGV++R+RVNGGG
Sbjct: 17 KTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPILLLGKHRFAGVNMRIRVNGGG 76
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD 186
H +Q+YAIRQ+I+KALVAYYQK + +LV+ TLL D
Sbjct: 77 HTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVAD 123
Score = 177 (67.4 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 32/44 (72%), Positives = 41/44 (93%)
Query: 180 LTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
+ LLGK +FAGV++R+RVNGGGH +Q+YAIRQ+I+KALVAYYQK
Sbjct: 55 ILLLGKHRFAGVNMRIRVNGGGHTSQVYAIRQSIAKALVAYYQK 98
Score = 164 (62.8 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 29/54 (53%), Positives = 44/54 (81%)
Query: 25 AIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLG 78
A +SVQ FGRKK+A AV +CK G G ++++G P+E+ +P++L++K+ EPILLLG
Sbjct: 6 ATESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPILLLG 59
>TAIR|locus:2146273 [details] [associations]
symbol:AT5G18380 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0009506
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006412
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC051626 GO:GO:0022627
eggNOG:COG0103 PANTHER:PTHR21569 UniGene:At.48467
HOGENOM:HOG000019803 KO:K02960 ProtClustDB:PLN00210 EMBL:AF370178
EMBL:AY059138 EMBL:Z35385 EMBL:F19995 IPI:IPI00534336
RefSeq:NP_197339.1 UniGene:At.23476 ProteinModelPortal:Q42340
SMR:Q42340 STRING:Q42340 PaxDb:Q42340 EnsemblPlants:AT5G18380.1
GeneID:831956 KEGG:ath:AT5G18380 GeneFarm:790 TAIR:At5g18380
InParanoid:Q42340 OMA:RSEPKKF PhylomeDB:Q42340
Genevestigator:Q42340 GermOnline:AT5G18380 Uniprot:Q42340
Length = 146
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 55/107 (51%), Positives = 81/107 (75%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+A AV +CK G G ++++G P+E+ +P++L++K+ EP+LLLGK +FAGV++R+RVNGGG
Sbjct: 17 KTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVNMRIRVNGGG 76
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD 186
H +Q+YAIRQ+I+KALVAYYQK + +LV+ TLL D
Sbjct: 77 HTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVAD 123
Score = 176 (67.0 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 32/42 (76%), Positives = 40/42 (95%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
LLGK +FAGV++R+RVNGGGH +Q+YAIRQ+I+KALVAYYQK
Sbjct: 57 LLGKHRFAGVNMRIRVNGGGHTSQVYAIRQSIAKALVAYYQK 98
Score = 163 (62.4 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 28/54 (51%), Positives = 44/54 (81%)
Query: 25 AIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLG 78
A +SVQ FGRKK+A AV +CK G G ++++G P+E+ +P++L++K+ EP+LLLG
Sbjct: 6 ATESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLG 59
>TAIR|locus:2103035 [details] [associations]
symbol:AT3G04230 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISS;IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000754 Pfam:PF00380 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020 GO:GO:0006412
GO:GO:0003735 EMBL:AC016829 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 eggNOG:COG0103
PANTHER:PTHR21569 HOGENOM:HOG000019803 KO:K02960
ProtClustDB:PLN00210 EMBL:BT004760 EMBL:AK228186 IPI:IPI00542657
RefSeq:NP_187073.1 UniGene:At.18789 ProteinModelPortal:Q9M8X9
SMR:Q9M8X9 STRING:Q9M8X9 PaxDb:Q9M8X9 PRIDE:Q9M8X9
EnsemblPlants:AT3G04230.1 GeneID:819578 KEGG:ath:AT3G04230
GeneFarm:789 TAIR:At3g04230 InParanoid:Q9M8X9 OMA:PRCHESK
PhylomeDB:Q9M8X9 Genevestigator:Q9M8X9 GermOnline:AT3G04230
Uniprot:Q9M8X9
Length = 146
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 60/134 (44%), Positives = 89/134 (66%)
Query: 71 QEPILLLGTK-SATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGV 129
+E + G K +ATAV YCK G G ++++G P+E+ +P++L++K+ EP+LLLGK +FAGV
Sbjct: 7 KESVQCFGRKKTATAVTYCKRGSGMIKLNGSPIELYQPEILRFKIFEPVLLLGKHRFAGV 66
Query: 130 DIRVRVNGGGHVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD--- 186
D+R+R GGG+ +++YAIRQ+I+KALVAYYQK + +L++ TLL D
Sbjct: 67 DMRIRATGGGNTSRVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILMRYDRTLLVADPRR 126
Query: 187 ----KFAGVDIRVR 196
KF G R R
Sbjct: 127 CESKKFGGPGARAR 140
Score = 173 (66.0 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 30/54 (55%), Positives = 45/54 (83%)
Query: 25 AIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLG 78
A +SVQ FGRKK+ATAV YCK G G ++++G P+E+ +P++L++K+ EP+LLLG
Sbjct: 6 AKESVQCFGRKKTATAVTYCKRGSGMIKLNGSPIELYQPEILRFKIFEPVLLLG 59
Score = 160 (61.4 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 29/42 (69%), Positives = 38/42 (90%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
LLGK +FAGVD+R+R GGG+ +++YAIRQ+I+KALVAYYQK
Sbjct: 57 LLGKHRFAGVDMRIRATGGGNTSRVYAIRQSIAKALVAYYQK 98
>POMBASE|SPAC664.04c [details] [associations]
symbol:rps1602 "40S ribosomal protein S16 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 PomBase:SPAC664.04c
PomBase:SPBC18H10.14 EMBL:CU329670 GenomeReviews:CU329670_GR
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735
GO:GO:0002181 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 PANTHER:PTHR21569
HOGENOM:HOG000019803 KO:K02960 OMA:GGGFMGQ EMBL:AB017604 PIR:T39778
PIR:T43419 RefSeq:NP_593452.1 RefSeq:NP_595738.1
ProteinModelPortal:O60144 SMR:O60144 MINT:MINT-4733759
STRING:O60144 PRIDE:O60144 EnsemblFungi:SPAC664.04c.1
EnsemblFungi:SPBC18H10.14.1 GeneID:2540812 GeneID:2543559
KEGG:spo:SPAC664.04c KEGG:spo:SPBC18H10.14 OrthoDB:EOG4V9Z17
NextBio:20801930 Uniprot:O60144
Length = 140
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 70/133 (52%), Positives = 90/133 (67%)
Query: 72 EPILLLGTK-SATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVD 130
+ + G K +ATAVA+CK GKG ++V+G PL +++P++L+ K+ EPIL+ G DKFAGVD
Sbjct: 2 QSVQCFGKKGNATAVAHCKVGKGLIKVNGAPLSLVQPEILRMKVYEPILVAGADKFAGVD 61
Query: 131 IRVRVNGGGHVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD---- 186
IRVRV+GGGHV+QIYAIRQAISKA+VAYYQK +K L+ TLL D
Sbjct: 62 IRVRVSGGGHVSQIYAIRQAISKAIVAYYQKFVDEHSKAELKKALITYDRTLLVADPRRM 121
Query: 187 ---KFAGVDIRVR 196
KF G R R
Sbjct: 122 EPKKFGGHGARAR 134
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 38/51 (74%), Positives = 44/51 (86%)
Query: 173 KMLVKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
+M V + + G DKFAGVDIRVRV+GGGHV+QIYAIRQAISKA+VAYYQK
Sbjct: 42 RMKVYEPILVAGADKFAGVDIRVRVSGGGHVSQIYAIRQAISKAIVAYYQK 92
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 29/60 (48%), Positives = 45/60 (75%)
Query: 26 IKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTKSATAV 85
++SVQ FG+K +ATAVA+CK GKG ++V+G PL +++P++L+ K+ EPIL+ G V
Sbjct: 1 MQSVQCFGKKGNATAVAHCKVGKGLIKVNGAPLSLVQPEILRMKVYEPILVAGADKFAGV 60
>POMBASE|SPBC18H10.14 [details] [associations]
symbol:rps1601 "40S ribosomal protein S16 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0006412 "translation" evidence=ISO]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO]
[GO:0042254 "ribosome biogenesis" evidence=ISO] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 PomBase:SPAC664.04c
PomBase:SPBC18H10.14 EMBL:CU329670 GenomeReviews:CU329670_GR
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735
GO:GO:0002181 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 PANTHER:PTHR21569
HOGENOM:HOG000019803 KO:K02960 OMA:GGGFMGQ EMBL:AB017604 PIR:T39778
PIR:T43419 RefSeq:NP_593452.1 RefSeq:NP_595738.1
ProteinModelPortal:O60144 SMR:O60144 MINT:MINT-4733759
STRING:O60144 PRIDE:O60144 EnsemblFungi:SPAC664.04c.1
EnsemblFungi:SPBC18H10.14.1 GeneID:2540812 GeneID:2543559
KEGG:spo:SPAC664.04c KEGG:spo:SPBC18H10.14 OrthoDB:EOG4V9Z17
NextBio:20801930 Uniprot:O60144
Length = 140
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 70/133 (52%), Positives = 90/133 (67%)
Query: 72 EPILLLGTK-SATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVD 130
+ + G K +ATAVA+CK GKG ++V+G PL +++P++L+ K+ EPIL+ G DKFAGVD
Sbjct: 2 QSVQCFGKKGNATAVAHCKVGKGLIKVNGAPLSLVQPEILRMKVYEPILVAGADKFAGVD 61
Query: 131 IRVRVNGGGHVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD---- 186
IRVRV+GGGHV+QIYAIRQAISKA+VAYYQK +K L+ TLL D
Sbjct: 62 IRVRVSGGGHVSQIYAIRQAISKAIVAYYQKFVDEHSKAELKKALITYDRTLLVADPRRM 121
Query: 187 ---KFAGVDIRVR 196
KF G R R
Sbjct: 122 EPKKFGGHGARAR 134
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 38/51 (74%), Positives = 44/51 (86%)
Query: 173 KMLVKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
+M V + + G DKFAGVDIRVRV+GGGHV+QIYAIRQAISKA+VAYYQK
Sbjct: 42 RMKVYEPILVAGADKFAGVDIRVRVSGGGHVSQIYAIRQAISKAIVAYYQK 92
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 29/60 (48%), Positives = 45/60 (75%)
Query: 26 IKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTKSATAV 85
++SVQ FG+K +ATAVA+CK GKG ++V+G PL +++P++L+ K+ EPIL+ G V
Sbjct: 1 MQSVQCFGKKGNATAVAHCKVGKGLIKVNGAPLSLVQPEILRMKVYEPILVAGADKFAGV 60
>ASPGD|ASPL0000000085 [details] [associations]
symbol:AN9468 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0030686 "90S preribosome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840
EMBL:BN001301 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569
HOGENOM:HOG000019803 OMA:GGGFMGQ EnsemblFungi:CADANIAT00007062
Uniprot:C8V3D8
Length = 143
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 64/124 (51%), Positives = 89/124 (71%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK+GKG ++V+G+PL++++P++L++K EP+L++G DKFAGVDIRVRV GGG
Sbjct: 14 KTATAVAHCKQGKGLIKVNGQPLQLVQPEILRFKAYEPVLIVGADKFAGVDIRVRVTGGG 73
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD-------KFAGVD 192
H +Q+YAIRQAI+K+LVAYYQK ++ V+ TLL D KF G
Sbjct: 74 HTSQVYAIRQAIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLLVADNRRAEPKKFGGRG 133
Query: 193 IRVR 196
R R
Sbjct: 134 ARAR 137
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 41/74 (55%), Positives = 50/74 (67%)
Query: 162 CKQATGLL---GTEKMLVKSTLT---------LLGKDKFAGVDIRVRVNGGGHVAQIYAI 209
CKQ GL+ G LV+ + ++G DKFAGVDIRVRV GGGH +Q+YAI
Sbjct: 22 CKQGKGLIKVNGQPLQLVQPEILRFKAYEPVLIVGADKFAGVDIRVRVTGGGHTSQVYAI 81
Query: 210 RQAISKALVAYYQK 223
RQAI+K+LVAYYQK
Sbjct: 82 RQAIAKSLVAYYQK 95
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 29/61 (47%), Positives = 50/61 (81%)
Query: 25 AIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTKSATA 84
++ SVQ FG+KK+ATAVA+CK+GKG ++V+G+PL++++P++L++K EP+L++G
Sbjct: 3 SVPSVQCFGKKKTATAVAHCKQGKGLIKVNGQPLQLVQPEILRFKAYEPVLIVGADKFAG 62
Query: 85 V 85
V
Sbjct: 63 V 63
>WB|WBGene00004485 [details] [associations]
symbol:rps-16 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0009792 GO:GO:0040007 GO:GO:0006915 GO:GO:0002119
GO:GO:0006412 GO:GO:0018996 GO:GO:0000003 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:Z78413 eggNOG:COG0103
PANTHER:PTHR21569 HOGENOM:HOG000019803 KO:K02960 OMA:GGGFMGQ
GeneTree:ENSGT00390000013067 PIR:T24280 RefSeq:NP_506690.1
ProteinModelPortal:Q22054 SMR:Q22054 IntAct:Q22054 STRING:Q22054
PaxDb:Q22054 PRIDE:Q22054 EnsemblMetazoa:T01C3.6.1
EnsemblMetazoa:T01C3.6.2 GeneID:179998 KEGG:cel:CELE_T01C3.6
UCSC:T01C3.6.2 CTD:179998 WormBase:T01C3.6 InParanoid:Q22054
NextBio:907694 Uniprot:Q22054
Length = 144
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 56/82 (68%), Positives = 76/82 (92%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK+G+G ++V+GRPLE +EP++L+ KLQEP+LL+GK++F VDIR+RV+GGG
Sbjct: 15 KTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDVDIRIRVSGGG 74
Query: 140 HVAQIYAIRQAISKALVAYYQK 161
HVAQIYA+RQA++KALVAYY K
Sbjct: 75 HVAQIYAVRQALAKALVAYYHK 96
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 34/53 (64%), Positives = 49/53 (92%)
Query: 26 IKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLG 78
++SVQ FGRKK+ATAVA+CK+G+G ++V+GRPLE +EP++L+ KLQEP+LL+G
Sbjct: 5 VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVG 57
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 32/51 (62%), Positives = 44/51 (86%)
Query: 173 KMLVKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
++ ++ L L+GK++F VDIR+RV+GGGHVAQIYA+RQA++KALVAYY K
Sbjct: 46 RIKLQEPLLLVGKERFQDVDIRIRVSGGGHVAQIYAVRQALAKALVAYYHK 96
>UNIPROTKB|Q22054 [details] [associations]
symbol:rps-16 "40S ribosomal protein S16" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 GO:GO:0018996 GO:GO:0000003
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:Z78413 eggNOG:COG0103
PANTHER:PTHR21569 HOGENOM:HOG000019803 KO:K02960 OMA:GGGFMGQ
GeneTree:ENSGT00390000013067 PIR:T24280 RefSeq:NP_506690.1
ProteinModelPortal:Q22054 SMR:Q22054 IntAct:Q22054 STRING:Q22054
PaxDb:Q22054 PRIDE:Q22054 EnsemblMetazoa:T01C3.6.1
EnsemblMetazoa:T01C3.6.2 GeneID:179998 KEGG:cel:CELE_T01C3.6
UCSC:T01C3.6.2 CTD:179998 WormBase:T01C3.6 InParanoid:Q22054
NextBio:907694 Uniprot:Q22054
Length = 144
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 56/82 (68%), Positives = 76/82 (92%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK+G+G ++V+GRPLE +EP++L+ KLQEP+LL+GK++F VDIR+RV+GGG
Sbjct: 15 KTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDVDIRIRVSGGG 74
Query: 140 HVAQIYAIRQAISKALVAYYQK 161
HVAQIYA+RQA++KALVAYY K
Sbjct: 75 HVAQIYAVRQALAKALVAYYHK 96
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 34/53 (64%), Positives = 49/53 (92%)
Query: 26 IKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLG 78
++SVQ FGRKK+ATAVA+CK+G+G ++V+GRPLE +EP++L+ KLQEP+LL+G
Sbjct: 5 VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVG 57
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 32/51 (62%), Positives = 44/51 (86%)
Query: 173 KMLVKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
++ ++ L L+GK++F VDIR+RV+GGGHVAQIYA+RQA++KALVAYY K
Sbjct: 46 RIKLQEPLLLVGKERFQDVDIRIRVSGGGHVAQIYAVRQALAKALVAYYHK 96
>UNIPROTKB|K7GLK5 [details] [associations]
symbol:K7GLK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569
GeneTree:ENSGT00390000013067 EMBL:FP236263
Ensembl:ENSSSCT00000035922 Uniprot:K7GLK5
Length = 129
Score = 228 (85.3 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 53/91 (58%), Positives = 61/91 (67%)
Query: 113 KLQEPILLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQKCKQATGLLGTE 172
KL EP+LLLGK++FAGVDIRVRV GGGHVAQIYAIRQ+ISKALVAYYQK +
Sbjct: 33 KLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIK 92
Query: 173 KMLVKSTLTLLGKD-------KFAGVDIRVR 196
+L++ TLL D KF G R R
Sbjct: 93 DILIQYDRTLLVADPRRCESKKFGGPGARAR 123
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 44/62 (70%), Positives = 51/62 (82%)
Query: 162 CKQATGLLGTEKMLVKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYY 221
CK+ GL+ K+L + LLGK++FAGVDIRVRV GGGHVAQIYAIRQ+ISKALVAYY
Sbjct: 25 CKRGNGLI---KLL--EPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYY 79
Query: 222 QK 223
QK
Sbjct: 80 QK 81
Score = 82 (33.9 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRV 53
P K + FGRKK+ATAVA+CK G G +++
Sbjct: 2 PSKGLYSRCRSFGRKKTATAVAHCKRGNGLIKL 34
Score = 57 (25.1 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 80 KSATAVAYCKEGKGNLRV 97
K+ATAVA+CK G G +++
Sbjct: 17 KTATAVAHCKRGNGLIKL 34
>SGD|S000004751 [details] [associations]
symbol:RPS16A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0003735
"structural constituent of ribosome" evidence=IEA;NAS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=NAS] [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IGI] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 SGD:S000004751 EMBL:BK006946 GO:GO:0003735
GO:GO:0002181 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0030686 EMBL:Z47071
GO:GO:0000462 PDB:1S1H PDBsum:1S1H GO:GO:0022627 PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3U5C PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30
PDBsum:3U5C PDBsum:3U5G PANTHER:PTHR21569 PDB:1K5X PDBsum:1K5X
KO:K02960 PIR:S67619 RefSeq:NP_010200.1 RefSeq:NP_013863.2
ProteinModelPortal:P0CX51 SMR:P0CX51 IntAct:P0CX51
EnsemblFungi:YDL083C EnsemblFungi:YMR143W GeneID:851476
GeneID:855174 KEGG:sce:YDL083C KEGG:sce:YMR143W
EvolutionaryTrace:P0CX51 NextBio:968780 ArrayExpress:P0CX51
GermOnline:YMR143W Uniprot:P0CX51
Length = 143
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 52/82 (63%), Positives = 72/82 (87%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
KSATAVA+ K GKG ++V+G P+ ++EP++L++K+ EP+LL+G DKF+ +DIRVRV GGG
Sbjct: 14 KSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNIDIRVRVTGGG 73
Query: 140 HVAQIYAIRQAISKALVAYYQK 161
HV+Q+YAIRQAI+K LVAY+QK
Sbjct: 74 HVSQVYAIRQAIAKGLVAYHQK 95
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 176 VKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
V L L+G DKF+ +DIRVRV GGGHV+Q+YAIRQAI+K LVAY+QK
Sbjct: 48 VYEPLLLVGLDKFSNIDIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQK 95
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 30/54 (55%), Positives = 46/54 (85%)
Query: 25 AIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLG 78
A+ SVQ FG+KKSATAVA+ K GKG ++V+G P+ ++EP++L++K+ EP+LL+G
Sbjct: 3 AVPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVG 56
>SGD|S000002241 [details] [associations]
symbol:RPS16B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI] [GO:0003735
"structural constituent of ribosome" evidence=IEA;NAS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=NAS] [GO:0022627
"cytosolic small ribosomal subunit" evidence=NAS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
SGD:S000002241 EMBL:BK006938 GO:GO:0003735 GO:GO:0002181
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0000462 GO:GO:0022627 PANTHER:PTHR21569
KO:K02960 PIR:S67619 RefSeq:NP_010200.1 RefSeq:NP_013863.2
EnsemblFungi:YDL083C EnsemblFungi:YMR143W GeneID:851476
GeneID:855174 KEGG:sce:YDL083C KEGG:sce:YMR143W NextBio:968780
EMBL:Z74131 ProteinModelPortal:P0CX52 SMR:P0CX52 IntAct:P0CX52
GeneTree:ENSGT00390000013067 ArrayExpress:P0CX52 GermOnline:YDL083C
Uniprot:P0CX52
Length = 143
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 52/82 (63%), Positives = 72/82 (87%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
KSATAVA+ K GKG ++V+G P+ ++EP++L++K+ EP+LL+G DKF+ +DIRVRV GGG
Sbjct: 14 KSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNIDIRVRVTGGG 73
Query: 140 HVAQIYAIRQAISKALVAYYQK 161
HV+Q+YAIRQAI+K LVAY+QK
Sbjct: 74 HVSQVYAIRQAIAKGLVAYHQK 95
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 176 VKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
V L L+G DKF+ +DIRVRV GGGHV+Q+YAIRQAI+K LVAY+QK
Sbjct: 48 VYEPLLLVGLDKFSNIDIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQK 95
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 30/54 (55%), Positives = 46/54 (85%)
Query: 25 AIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLG 78
A+ SVQ FG+KKSATAVA+ K GKG ++V+G P+ ++EP++L++K+ EP+LL+G
Sbjct: 3 AVPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVG 56
>UNIPROTKB|G4N5Q4 [details] [associations]
symbol:MGG_12892 "40S ribosomal protein S16" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 EMBL:CM001233 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0043581 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569 KO:K02960
RefSeq:XP_003712851.1 ProteinModelPortal:G4N5Q4 SMR:G4N5Q4
EnsemblFungi:MGG_12892T0 GeneID:2675377 KEGG:mgr:MGG_12892
Uniprot:G4N5Q4
Length = 144
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 56/109 (51%), Positives = 82/109 (75%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA C +G+G ++V+GRPL ++EP L+YK+ EP+L++G D+ A +DIRVRV GGG
Sbjct: 15 KTATAVAQCVKGQGLIKVNGRPLNLVEPATLRYKVYEPLLVIGLDQVANMDIRVRVTGGG 74
Query: 140 HVAQIYAIRQAISKALVAYYQKC--KQATGLLGTEKMLVKSTLTLLGKD 186
H +Q+YA+RQAI+K++VAYYQK + + LL ++ L + TLL D
Sbjct: 75 HTSQVYAVRQAIAKSIVAYYQKFVDEHSKNLL--KQALTQYDRTLLVAD 121
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 28/50 (56%), Positives = 42/50 (84%)
Query: 29 VQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLG 78
VQ FG+KK+ATAVA C +G+G ++V+GRPL ++EP L+YK+ EP+L++G
Sbjct: 8 VQCFGKKKTATAVAQCVKGQGLIKVNGRPLNLVEPATLRYKVYEPLLVIG 57
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 171 TEKMLVKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
T + V L ++G D+ A +DIRVRV GGGH +Q+YA+RQAI+K++VAYYQK
Sbjct: 44 TLRYKVYEPLLVIGLDQVANMDIRVRVTGGGHTSQVYAVRQAIAKSIVAYYQK 96
>UNIPROTKB|K7GKC0 [details] [associations]
symbol:K7GKC0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 Pfam:PF00380
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 PANTHER:PTHR21569 GeneTree:ENSGT00390000013067
EMBL:FP236263 Ensembl:ENSSSCT00000034766 Uniprot:K7GKC0
Length = 97
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 53/76 (69%), Positives = 64/76 (84%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLGK++FAGVDIRVRV GGG
Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGG 76
Query: 140 HVAQIYAIRQAISKAL 155
HVAQIY Q++ L
Sbjct: 77 HVAQIYVHLQSLGGLL 92
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTK 80
P K + FGRKK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLG +
Sbjct: 2 PSKGLYSRCRSFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKE 61
Query: 81 SATAV 85
V
Sbjct: 62 RFAGV 66
Score = 125 (49.1 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 25/36 (69%), Positives = 29/36 (80%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKAL 217
LLGK++FAGVDIRVRV GGGHVAQIY Q++ L
Sbjct: 57 LLGKERFAGVDIRVRVKGGGHVAQIYVHLQSLGGLL 92
>UNIPROTKB|Q6IPX4 [details] [associations]
symbol:RPS16 "40S ribosomal protein S16" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000754 Pfam:PF00380
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC011500
PANTHER:PTHR21569 HOGENOM:HOG000019803 ChiTaRS:RPS16
UniGene:Hs.397609 HGNC:HGNC:10396 EMBL:BC071674 IPI:IPI00450975
SMR:Q6IPX4 STRING:Q6IPX4 Ensembl:ENST00000339471 UCSC:uc002olm.3
HOVERGEN:HBG061802 Uniprot:Q6IPX4
Length = 152
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 52/72 (72%), Positives = 62/72 (86%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLGK++FAGVDIRVRV GGG
Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGG 76
Query: 140 HVAQIYAIRQAI 151
HVAQIY Q +
Sbjct: 77 HVAQIYGESQEL 88
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTK 80
P K ++SVQVFGRKK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYKL EP+LLLG +
Sbjct: 2 PSKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKE 61
Query: 81 SATAV 85
V
Sbjct: 62 RFAGV 66
Score = 123 (48.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAI 213
LLGK++FAGVDIRVRV GGGHVAQIY Q +
Sbjct: 57 LLGKERFAGVDIRVRVKGGGHVAQIYGESQEL 88
>DICTYBASE|DDB_G0284093 [details] [associations]
symbol:rps16 "40S ribosomal protein S16"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
dictyBase:DDB_G0284093 GenomeReviews:CM000153_GR GO:GO:0006412
GO:GO:0005840 EMBL:AAFI02000063 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0103 PANTHER:PTHR21569 KO:K02960 OMA:GGGFMGQ
RefSeq:XP_638746.1 ProteinModelPortal:Q54Q51 SMR:Q54Q51
STRING:Q54Q51 EnsemblProtists:DDB0231057 GeneID:8624416
KEGG:ddi:DDB_G0284093 ProtClustDB:PTZ00086 Uniprot:Q54Q51
Length = 147
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 52/82 (63%), Positives = 68/82 (82%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
++A AVAY GKG ++V+G PLE I+PK L+ K+ EP+L++GKD F+ VDIRVRV GGG
Sbjct: 18 RTAVAVAYATNGKGLIKVNGVPLEFIQPKNLKLKVYEPVLIVGKDVFSQVDIRVRVRGGG 77
Query: 140 HVAQIYAIRQAISKALVAYYQK 161
VAQIYAIRQAI+K++VAY+QK
Sbjct: 78 SVAQIYAIRQAIAKSIVAYHQK 99
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 173 KMLVKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
K+ V + ++GKD F+ VDIRVRV GGG VAQIYAIRQAI+K++VAY+QK
Sbjct: 49 KLKVYEPVLIVGKDVFSQVDIRVRVRGGGSVAQIYAIRQAIAKSIVAYHQK 99
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 29 VQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLG 78
VQ G+K++A AVAY GKG ++V+G PLE I+PK L+ K+ EP+L++G
Sbjct: 11 VQTHGKKRTAVAVAYATNGKGLIKVNGVPLEFIQPKNLKLKVYEPVLIVG 60
>GENEDB_PFALCIPARUM|PF08_0076 [details] [associations]
symbol:PF08_0076 "40S ribosomal protein S16,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AL844507
PANTHER:PTHR21569 HOGENOM:HOG000019803 KO:K02960 OMA:GGGFMGQ
ProtClustDB:PTZ00086 RefSeq:XP_001349386.1
ProteinModelPortal:Q8IAX5 SMR:Q8IAX5 IntAct:Q8IAX5
MINT:MINT-1712334 PRIDE:Q8IAX5 EnsemblProtists:PF08_0076:mRNA
GeneID:2655275 KEGG:pfa:PF08_0076 EuPathDB:PlasmoDB:PF3D7_0813900
Uniprot:Q8IAX5
Length = 144
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 50/124 (40%), Positives = 76/124 (61%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGG 139
K+A AVA GKG ++++G+ L+++EP +L+ K+ EP+ L+G K +DIR+RV GGG
Sbjct: 15 KTAVAVATVTNGKGLIKLNGKNLDLVEPYILKTKVYEPLWLIGSGKLKNLDIRIRVKGGG 74
Query: 140 HVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKD-------KFAGVD 192
+QIYAIRQAI K +++YYQK + + +L++ +LL D KF G
Sbjct: 75 QTSQIYAIRQAIGKGIISYYQKYVDESTKKELKDVLLRYDRSLLVGDTRRCEPKKFGGKG 134
Query: 193 IRVR 196
R R
Sbjct: 135 ARAR 138
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 28/51 (54%), Positives = 35/51 (68%)
Query: 173 KMLVKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK 223
K V L L+G K +DIR+RV GGG +QIYAIRQAI K +++YYQK
Sbjct: 46 KTKVYEPLWLIGSGKLKNLDIRIRVKGGGQTSQIYAIRQAIGKGIISYYQK 96
Score = 135 (52.6 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 24/54 (44%), Positives = 41/54 (75%)
Query: 26 IKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGT 79
+K VQ FG+KK+A AVA GKG ++++G+ L+++EP +L+ K+ EP+ L+G+
Sbjct: 5 VKRVQTFGKKKTAVAVATVTNGKGLIKLNGKNLDLVEPYILKTKVYEPLWLIGS 58
>UNIPROTKB|F1LUQ7 [details] [associations]
symbol:F1LUQ7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR005822
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR11545 IPI:IPI00359414 Ensembl:ENSRNOT00000046515
Uniprot:F1LUQ7
Length = 121
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 39/73 (53%), Positives = 48/73 (65%)
Query: 76 LLGTKSATAVAYCKEGKGNLRV-DGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVR 134
+ G K A+A +GK ++V D LEM EP QY+L +PIL LGK++FA V I VR
Sbjct: 12 VFGCKKK-AIAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFARVGIWVR 70
Query: 135 VNGGGHVAQIYAI 147
VNG G VAQIYAI
Sbjct: 71 VNGVGRVAQIYAI 83
Score = 94 (38.1 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 28/57 (49%), Positives = 36/57 (63%)
Query: 23 KVAIKSVQVFGRKKSATAVAYCKEGKGNLRV-DGRPLEMIEPKLLQYKLQEPILLLG 78
K ++S QVFG KK A A+ + K GK ++V D LEM EP QY+L +PIL LG
Sbjct: 4 KGPLQSKQVFGCKKKAIAM-HAK-GKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLG 58
Score = 91 (37.1 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 20/27 (74%), Positives = 22/27 (81%)
Query: 183 LGKDKFAGVDIRVRVNGGGHVAQIYAI 209
LGK++FA V I VRVNG G VAQIYAI
Sbjct: 57 LGKERFARVGIWVRVNGVGRVAQIYAI 83
>UNIPROTKB|K7GMA5 [details] [associations]
symbol:K7GMA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 Pfam:PF00380
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 PANTHER:PTHR21569 GeneTree:ENSGT00390000013067
EMBL:FP236263 Ensembl:ENSSSCT00000034951 Uniprot:K7GMA5
Length = 69
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQE 72
P K + FGRKK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYK E
Sbjct: 2 PSKGLYSRCRSFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKYSE 53
Score = 135 (52.6 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQE 116
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYK E
Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKYSE 53
>UNIPROTKB|K7GQD9 [details] [associations]
symbol:K7GQD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 Pfam:PF00380
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 PANTHER:PTHR21569 GeneTree:ENSGT00390000013067
EMBL:FP236263 Ensembl:ENSSSCT00000034492 Uniprot:K7GQD9
Length = 71
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKL 70
P K + FGRKK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYK+
Sbjct: 2 PSKGLYSRCRSFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKV 51
Score = 132 (51.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 24/35 (68%), Positives = 31/35 (88%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKL 114
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYK+
Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKV 51
>UNIPROTKB|K7GRX5 [details] [associations]
symbol:K7GRX5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 Pfam:PF00380
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 PANTHER:PTHR21569 GeneTree:ENSGT00390000013067
EMBL:FP236263 Ensembl:ENSSSCT00000035729 Uniprot:K7GRX5
Length = 62
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 30/49 (61%), Positives = 37/49 (75%)
Query: 21 PPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYK 69
P K + FGRKK+ATAVA+CK G G ++V+GRPLEMIEP+ LQYK
Sbjct: 2 PSKGLYSRCRSFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYK 50
Score = 131 (51.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 24/34 (70%), Positives = 30/34 (88%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYK 113
K+ATAVA+CK G G ++V+GRPLEMIEP+ LQYK
Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYK 50
>TIGR_CMR|CHY_2273 [details] [associations]
symbol:CHY_2273 "ribosomal protein S9" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0103 HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035
PANTHER:PTHR21569 OMA:IKQGAAR HAMAP:MF_00532_B RefSeq:YP_361082.1
ProteinModelPortal:Q3A9V2 SMR:Q3A9V2 STRING:Q3A9V2 GeneID:3728242
KEGG:chy:CHY_2273 PATRIC:21277617
BioCyc:CHYD246194:GJCN-2272-MONOMER Uniprot:Q3A9V2
Length = 130
Score = 111 (44.1 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEP-KLLQYKLQEPILLLGK-DKFAGVDIRVRVNG 137
K A A + G+GN+ ++G+ LE P K LQ +++P+ L KF D++ +V+G
Sbjct: 13 KEAVARVFVVPGEGNITINGKSLEEYFPRKTLQIIVKQPLELTNTVGKF---DVKAKVHG 69
Query: 138 GGHVAQIYAIRQAISKALV 156
GG Q A+R I++ALV
Sbjct: 70 GGISGQAGAVRLGIARALV 88
>TIGR_CMR|BA_0144 [details] [associations]
symbol:BA_0144 "ribosomal protein S9" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
RefSeq:NP_842711.1 RefSeq:YP_016749.1 RefSeq:YP_026430.1
ProteinModelPortal:Q81VP8 SMR:Q81VP8 DNASU:1086438
EnsemblBacteria:EBBACT00000012383 EnsemblBacteria:EBBACT00000013924
EnsemblBacteria:EBBACT00000021050 GeneID:1086438 GeneID:2819069
GeneID:2850884 KEGG:ban:BA_0144 KEGG:bar:GBAA_0144 KEGG:bat:BAS0144
OMA:IKQGAAR ProtClustDB:PRK00132 BioCyc:BANT260799:GJAJ-155-MONOMER
BioCyc:BANT261594:GJ7F-157-MONOMER HAMAP:MF_00532_B Uniprot:Q81VP8
Length = 130
Score = 106 (42.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/94 (32%), Positives = 48/94 (51%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMIEP-KLLQYKLQEPILLLGKDKFAGVDIRVRVNGG 138
KS+ A G+G + ++GR E P L+ +++P L+ + D+ V VNGG
Sbjct: 13 KSSVARVRLVSGEGRVIINGRDFENYIPFAALREVVKQP--LVATETLGNYDVLVNVNGG 70
Query: 139 GHVAQIYAIRQAISKALVAY---YQKCKQATGLL 169
G+ Q AIR IS+AL+ Y+ + GLL
Sbjct: 71 GYTGQAGAIRHGISRALLKADPEYRLTLKRAGLL 104
Score = 78 (32.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 182 LLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALV 218
L+ + D+ V VNGGG+ Q AIR IS+AL+
Sbjct: 52 LVATETLGNYDVLVNVNGGGYTGQAGAIRHGISRALL 88
Score = 55 (24.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 33 GRKKSATAVAYCKEGKGNLRVDGRPLEMIEP-KLLQYKLQEPILLLGT 79
GR+KS+ A G+G + ++GR E P L+ +++P++ T
Sbjct: 10 GRRKSSVARVRLVSGEGRVIINGRDFENYIPFAALREVVKQPLVATET 57
>TIGR_CMR|SO_3939 [details] [associations]
symbol:SO_3939 "ribosomal protein S9" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
RefSeq:NP_719470.1 ProteinModelPortal:Q8EAG3 SMR:Q8EAG3
GeneID:1171577 KEGG:son:SO_3939 PATRIC:23527556 Uniprot:Q8EAG3
Length = 130
Score = 104 (41.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEM-IEPKLLQYKLQEPILLLGK-DKFAGVDIRVRVNG 137
K++TA + K G GN+ V+ RPL+ + + +++P+ L+ DK +DI V V G
Sbjct: 13 KTSTARVFAKAGSGNIVVNQRPLDQYFGRETARMVVRQPLELVEMTDK---LDIYVTVKG 69
Query: 138 GGHVAQIYAIRQAISKALV 156
GG Q AIR I++AL+
Sbjct: 70 GGITGQAGAIRHGITRALM 88
Score = 72 (30.4 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 171 TEKMLVKSTLTLLGK-DKFAGVDIRVRVNGGGHVAQIYAIRQAISKALV 218
T +M+V+ L L+ DK +DI V V GGG Q AIR I++AL+
Sbjct: 43 TARMVVRQPLELVEMTDK---LDIYVTVKGGGITGQAGAIRHGITRALM 88
Score = 71 (30.1 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 33 GRKKSATAVAYCKEGKGNLRVDGRPLE 59
GR+K++TA + K G GN+ V+ RPL+
Sbjct: 10 GRRKTSTARVFAKAGSGNIVVNQRPLD 36
>TIGR_CMR|CJE_1652 [details] [associations]
symbol:CJE_1652 "ribosomal protein S9" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412
GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0103 HOGENOM:HOG000019802 KO:K02996
InterPro:IPR023035 PANTHER:PTHR21569 OMA:IKQGAAR
ProtClustDB:PRK00132 HAMAP:MF_00532_B RefSeq:YP_179633.1
ProteinModelPortal:Q5HSV2 STRING:Q5HSV2 PRIDE:Q5HSV2 GeneID:3232280
KEGG:cjr:CJE1652 PATRIC:20045099
BioCyc:CJEJ195099:GJC0-1682-MONOMER Uniprot:Q5HSV2
Length = 129
Score = 101 (40.6 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/103 (29%), Positives = 54/103 (52%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLE--MIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNG 137
K+A A + K G G + V+G L + + ++ K+ +P+L+ ++ +DI+ G
Sbjct: 11 KTAIAKVWVKPGSGKISVNGVDLNTWLGGHEAIKLKVVQPLLVTKQE--TSMDIKATTLG 68
Query: 138 GGHVAQIYAIRQAISKALVAY---YQKCKQATGLLGTEKMLVK 177
GG+ AQ A+R IS+AL A ++ + GLL + V+
Sbjct: 69 GGYSAQAEALRHGISRALAAMDADFRALLKPKGLLTRDSRTVE 111
>UNIPROTKB|Q9KUF0 [details] [associations]
symbol:rpsI "30S ribosomal protein S9" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0103 KO:K02996 InterPro:IPR023035
PANTHER:PTHR21569 OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
PIR:C82308 RefSeq:NP_230222.1 ProteinModelPortal:Q9KUF0 SMR:Q9KUF0
DNASU:2615248 GeneID:2615248 KEGG:vch:VC0571 PATRIC:20080258
Uniprot:Q9KUF0
Length = 130
Score = 95 (38.5 bits), Expect = 0.00018, P = 0.00018
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMI--EPKLLQYKLQEPILLLGKDKFAGVDIRVRVNG 137
KS+ A + K G GN+ ++ R LE P +++P+ L+ D +D+ + V G
Sbjct: 13 KSSAARVFIKPGSGNIVINKRSLEEYFGRPTSCMV-VKQPLELV--DMVEKLDLYITVKG 69
Query: 138 GGHVAQIYAIRQAISKALVAY 158
GG Q AIR I++AL+ Y
Sbjct: 70 GGISGQAGAIRHGITRALMEY 90
Score = 76 (31.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 171 TEKMLVKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAY 220
T M+VK L L+ D +D+ + V GGG Q AIR I++AL+ Y
Sbjct: 43 TSCMVVKQPLELV--DMVEKLDLYITVKGGGISGQAGAIRHGITRALMEY 90
Score = 62 (26.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 33 GRKKSATAVAYCKEGKGNLRVDGRPLE 59
GR+KS+ A + K G GN+ ++ R LE
Sbjct: 10 GRRKSSAARVFIKPGSGNIVINKRSLE 36
>TIGR_CMR|VC_0571 [details] [associations]
symbol:VC_0571 "ribosomal protein S9" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103 KO:K02996
InterPro:IPR023035 PANTHER:PTHR21569 OMA:IKQGAAR
ProtClustDB:PRK00132 HAMAP:MF_00532_B PIR:C82308 RefSeq:NP_230222.1
ProteinModelPortal:Q9KUF0 SMR:Q9KUF0 DNASU:2615248 GeneID:2615248
KEGG:vch:VC0571 PATRIC:20080258 Uniprot:Q9KUF0
Length = 130
Score = 95 (38.5 bits), Expect = 0.00018, P = 0.00018
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEMI--EPKLLQYKLQEPILLLGKDKFAGVDIRVRVNG 137
KS+ A + K G GN+ ++ R LE P +++P+ L+ D +D+ + V G
Sbjct: 13 KSSAARVFIKPGSGNIVINKRSLEEYFGRPTSCMV-VKQPLELV--DMVEKLDLYITVKG 69
Query: 138 GGHVAQIYAIRQAISKALVAY 158
GG Q AIR I++AL+ Y
Sbjct: 70 GGISGQAGAIRHGITRALMEY 90
Score = 76 (31.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 171 TEKMLVKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAY 220
T M+VK L L+ D +D+ + V GGG Q AIR I++AL+ Y
Sbjct: 43 TSCMVVKQPLELV--DMVEKLDLYITVKGGGISGQAGAIRHGITRALMEY 90
Score = 62 (26.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 33 GRKKSATAVAYCKEGKGNLRVDGRPLE 59
GR+KS+ A + K G GN+ ++ R LE
Sbjct: 10 GRRKSSAARVFIKPGSGNIVINKRSLE 36
>TIGR_CMR|GSU_2875 [details] [associations]
symbol:GSU_2875 "ribosomal protein S9" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412
GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035
PANTHER:PTHR21569 OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
RefSeq:NP_953917.1 ProteinModelPortal:Q748X5 SMR:Q748X5
GeneID:2688687 KEGG:gsu:GSU2875 PATRIC:22028611
BioCyc:GSUL243231:GH27-2864-MONOMER Uniprot:Q748X5
Length = 130
Score = 95 (38.5 bits), Expect = 0.00018, P = 0.00018
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPL-EMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGG 138
KS+ A + K G G + ++ +P+ E + + +++P+ L+ +K DI V V GG
Sbjct: 13 KSSVARVWLKPGTGAIVINNKPIDEYFGRETSKMIVKQPLELV--EKVGAFDIYVNVRGG 70
Query: 139 GHVAQIYAIRQAISKALV 156
G Q AI+ I+KAL+
Sbjct: 71 GDSGQAGAIKHGITKALL 88
>TIGR_CMR|CBU_1748 [details] [associations]
symbol:CBU_1748 "ribosomal protein S9" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0103 HOGENOM:HOG000019802 KO:K02996
InterPro:IPR023035 PANTHER:PTHR21569 OMA:IKQGAAR
ProtClustDB:PRK00132 HAMAP:MF_00532_B RefSeq:NP_820728.1
ProteinModelPortal:Q83AX9 SMR:Q83AX9 GeneID:1209659
KEGG:cbu:CBU_1748 PATRIC:17932237
BioCyc:CBUR227377:GJ7S-1722-MONOMER Uniprot:Q83AX9
Length = 139
Score = 99 (39.9 bits), Expect = 0.00025, P = 0.00025
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 77 LGT---KSATAVAYCKEGKGNLRVDGRPL-EMIEPKLLQYKLQEPILLLGKDKFAGVDIR 132
LGT K+++A + + G G + ++G PL E + + +++P++ L D + D+
Sbjct: 10 LGTGRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKL--DVQSRFDVY 67
Query: 133 VRVNGGGHVAQIYAIRQAISKALVAY 158
V GGG Q AIR I++AL+ Y
Sbjct: 68 ATVQGGGDSGQAGAIRHGITRALIQY 93
>UNIPROTKB|P0A7X3 [details] [associations]
symbol:rpsI "30S ribosomal subunit protein S9"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 EMBL:U18997 GO:GO:0005840
GO:GO:0003735 GO:GO:0000049 PDB:3J00 PDBsum:3J00 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
DrugBank:DB01017 DrugBank:DB00254 PDB:3FIH PDB:3IZV PDB:3IZW
PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW DrugBank:DB00759 PDB:3SFS
PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ EMBL:X02130 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
PDB:4GAS PDB:4GD1 PDBsum:4GAS PDBsum:4GD1 PDB:1M5G PDB:1P6G
PDB:1P87 PDB:1VS5 PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB
PDB:2I2P PDB:2I2U PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD
PDB:2QBF PDB:2QBH PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0
PDB:2VHO PDB:2VHP PDB:2WWL PDB:2YKR PDB:2Z4K PDB:2Z4M PDB:3DF1
PDB:3DF3 PDB:3E1A PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S
PDB:3I1Z PDB:3I21 PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10
PDB:3J13 PDB:3J18 PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB
PDB:3OFO PDB:3OFP PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I
PDB:4ADV PDB:4GAQ PDB:4GD2 PDBsum:1M5G PDBsum:1P6G PDBsum:1P87
PDBsum:1VS5 PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9
PDBsum:2GYB PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN
PDBsum:2QB9 PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH
PDBsum:2QBJ PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0
PDBsum:2VHO PDBsum:2VHP PDBsum:2WWL PDBsum:2YKR PDBsum:2Z4K
PDBsum:2Z4M PDBsum:3DF1 PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C
PDBsum:3I1M PDBsum:3I1O PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z
PDBsum:3I21 PDBsum:3J0U PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z
PDBsum:3J10 PDBsum:3J13 PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ
PDBsum:3OAR PDBsum:3OFA PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP
PDBsum:3OFX PDBsum:3OFY PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I
PDBsum:4ADV PDBsum:4GAQ PDBsum:4GD2 DrugBank:DB00453
DrugBank:DB00618 DrugBank:DB00256 DrugBank:DB00595 DrugBank:DB00560
OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B PIR:H65114
RefSeq:NP_417697.1 RefSeq:YP_491414.1 ProteinModelPortal:P0A7X3
SMR:P0A7X3 DIP:DIP-35799N IntAct:P0A7X3 MINT:MINT-1290939
PaxDb:P0A7X3 PRIDE:P0A7X3 EnsemblBacteria:EBESCT00000000423
EnsemblBacteria:EBESCT00000018245 GeneID:12933452 GeneID:949000
KEGG:ecj:Y75_p3150 KEGG:eco:b3230 PATRIC:32121886 EchoBASE:EB0901
EcoGene:EG10908 BioCyc:EcoCyc:EG10908-MONOMER
BioCyc:ECOL316407:JW3199-MONOMER EvolutionaryTrace:P0A7X3
Genevestigator:P0A7X3 Uniprot:P0A7X3
Length = 130
Score = 94 (38.1 bits), Expect = 0.00046, P = 0.00046
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 80 KSATAVAYCKEGKGNLRVDGRPLEM-IEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGG 138
KS+ A + K G G + ++ R LE + + +++P+ L+ D +D+ + V GG
Sbjct: 13 KSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELV--DMVEKLDLYITVKGG 70
Query: 139 GHVAQIYAIRQAISKALVAY 158
G Q AIR I++AL+ Y
Sbjct: 71 GISGQAGAIRHGITRALMEY 90
Score = 77 (32.2 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 171 TEKMLVKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAY 220
T +M+V+ L L+ D +D+ + V GGG Q AIR I++AL+ Y
Sbjct: 43 TARMVVRQPLELV--DMVEKLDLYITVKGGGISGQAGAIRHGITRALMEY 90
Score = 56 (24.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 33 GRKKSATAVAYCKEGKGNLRVDGRPLE 59
GR+KS+ A + K G G + ++ R LE
Sbjct: 10 GRRKSSAARVFIKPGNGKIVINQRSLE 36
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 223 223 0.00098 112 3 11 22 0.39 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 43
No. of states in DFA: 508 (54 KB)
Total size of DFA: 122 KB (2078 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.84u 0.07s 16.91t Elapsed: 00:00:10
Total cpu time: 16.84u 0.07s 16.91t Elapsed: 00:00:10
Start: Thu Aug 15 12:28:10 2013 End: Thu Aug 15 12:28:20 2013