Your job contains 1 sequence.
>psy8078
MFLQREKFSETHGASRQNLFRLLDKSDGSTQALSREERRRRRRATQKYRTAHATRERVRV
EAFNSAFGELRKLLPTLPPDKKLSKIEILRLAICYIAYLNNVLET
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8078
(105 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0011277 - symbol:HLH4C "Helix loop helix protein 4... 192 3.3e-15 1
UNIPROTKB|H9L3K7 - symbol:NHLH1 "Uncharacterized protein"... 191 4.2e-15 1
UNIPROTKB|H9L3K8 - symbol:NHLH1 "Uncharacterized protein"... 191 4.2e-15 1
UNIPROTKB|E1BPH8 - symbol:NHLH1 "Uncharacterized protein"... 190 5.4e-15 1
UNIPROTKB|E2QW01 - symbol:NHLH1 "Uncharacterized protein"... 190 5.4e-15 1
UNIPROTKB|Q02575 - symbol:NHLH1 "Helix-loop-helix protein... 190 5.4e-15 1
UNIPROTKB|F1RJY2 - symbol:NHLH1 "Uncharacterized protein"... 190 5.4e-15 1
MGI|MGI:98481 - symbol:Nhlh1 "nescient helix loop helix 1... 190 5.4e-15 1
RGD|1310261 - symbol:Nhlh1 "nescient helix loop helix 1" ... 190 5.4e-15 1
ZFIN|ZDB-GENE-040426-1809 - symbol:nhlh2 "nescient helix ... 190 5.4e-15 1
UNIPROTKB|H9L3K6 - symbol:NHLH1 "Uncharacterized protein"... 189 6.9e-15 1
UNIPROTKB|E2RN55 - symbol:NHLH2 "Uncharacterized protein"... 187 1.1e-14 1
UNIPROTKB|Q02577 - symbol:NHLH2 "Helix-loop-helix protein... 187 1.1e-14 1
UNIPROTKB|F1SAW9 - symbol:NHLH2 "Uncharacterized protein"... 187 1.1e-14 1
MGI|MGI:97324 - symbol:Nhlh2 "nescient helix loop helix 2... 187 1.1e-14 1
RGD|1308294 - symbol:Nhlh2 "nescient helix loop helix 2" ... 187 1.1e-14 1
UNIPROTKB|E1BCX5 - symbol:NHLH2 "Uncharacterized protein"... 184 2.3e-14 1
WB|WBGene00001959 - symbol:hlh-15 species:6239 "Caenorhab... 158 1.3e-11 1
UNIPROTKB|Q18590 - symbol:hlh-15 "Protein HLH-15" species... 158 1.3e-11 1
UNIPROTKB|A6PVY9 - symbol:NHLH2 "Helix-loop-helix protein... 111 1.3e-06 1
ZFIN|ZDB-GENE-000511-1 - symbol:hand2 "heart and neural c... 94 0.00019 1
ZFIN|ZDB-GENE-081104-461 - symbol:ferd3l "Fer3-like (Dros... 89 0.00027 1
UNIPROTKB|P79782 - symbol:TCF15 "Transcription factor 15"... 91 0.00030 1
UNIPROTKB|F1RQC4 - symbol:HAND1 "Uncharacterized protein"... 91 0.00045 1
FB|FBgn0038402 - symbol:Fer2 "48 related 2" species:7227 ... 93 0.00045 1
UNIPROTKB|O96004 - symbol:HAND1 "Heart- and neural crest ... 91 0.00046 1
MGI|MGI:103577 - symbol:Hand1 "heart and neural crest der... 91 0.00046 1
RGD|621206 - symbol:Hand1 "heart and neural crest derivat... 91 0.00046 1
UNIPROTKB|Q0VCE2 - symbol:HAND1 "Heart- and neural crest ... 91 0.00047 1
UNIPROTKB|E2RPA0 - symbol:HAND1 "Uncharacterized protein"... 91 0.00047 1
ZFIN|ZDB-GENE-980605-20 - symbol:par1 "paraxis" species:7... 89 0.00051 1
UNIPROTKB|Q90691 - symbol:HAND1 "Heart- and neural crest ... 90 0.00051 1
ZFIN|ZDB-GENE-050208-498 - symbol:si:ch211-246m6.4 "si:ch... 88 0.00076 1
MGI|MGI:104664 - symbol:Tcf15 "transcription factor 15" s... 88 0.00078 1
RGD|1308464 - symbol:Tcf15 "transcription factor 15" spec... 88 0.00078 1
UNIPROTKB|A2VE98 - symbol:TCF15 "Transcription factor 15 ... 88 0.00081 1
UNIPROTKB|F1S863 - symbol:TCF15 "Uncharacterized protein"... 88 0.00081 1
UNIPROTKB|E2RI49 - symbol:TCF15 "Uncharacterized protein"... 88 0.00086 1
ZFIN|ZDB-GENE-081104-410 - symbol:si:dkey-34f9.3 "si:dkey... 88 0.00091 1
>FB|FBgn0011277 [details] [associations]
symbol:HLH4C "Helix loop helix protein 4C" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:AE014298
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00690000101643
FlyBase:FBgn0011277 EMBL:BT022167 RefSeq:NP_476989.2
UniGene:Dm.4840 SMR:Q9W4I4 IntAct:Q9W4I4 MINT:MINT-841047
STRING:Q9W4I4 EnsemblMetazoa:FBtr0070691 GeneID:31397
KEGG:dme:Dmel_CG3052 UCSC:CG3052-RA CTD:31397 InParanoid:Q9W4I4
OMA:CETAAQP GenomeRNAi:31397 NextBio:773442 Uniprot:Q9W4I4
Length = 167
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 41/62 (66%), Positives = 45/62 (72%)
Query: 44 ATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
AT KYRTAHATRER+RVEAFN +F E SKIEIL+LAICYIAYLN+VL
Sbjct: 105 ATLKYRTAHATRERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVL 164
Query: 104 ET 105
ET
Sbjct: 165 ET 166
>UNIPROTKB|H9L3K7 [details] [associations]
symbol:NHLH1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00690000101643
OMA:MMLNSDA EMBL:AADN02074022 Ensembl:ENSGALT00000040742
Uniprot:H9L3K7
Length = 130
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 43/74 (58%), Positives = 47/74 (63%)
Query: 31 QALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILR 90
Q LS AT KYRTAHATRER+RVEAFN AF E SKIEILR
Sbjct: 56 QHLSREERRRRRRATAKYRTAHATRERIRVEAFNMAFAELRKLLPTLPPDKKLSKIEILR 115
Query: 91 LAICYIAYLNNVLE 104
LAICYI+YLN+VL+
Sbjct: 116 LAICYISYLNHVLD 129
>UNIPROTKB|H9L3K8 [details] [associations]
symbol:NHLH1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00690000101643
OMA:MMLNSDA EMBL:AADN02074022 Ensembl:ENSGALT00000040743
Uniprot:H9L3K8
Length = 131
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 43/74 (58%), Positives = 47/74 (63%)
Query: 31 QALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILR 90
Q LS AT KYRTAHATRER+RVEAFN AF E SKIEILR
Sbjct: 57 QHLSREERRRRRRATAKYRTAHATRERIRVEAFNMAFAELRKLLPTLPPDKKLSKIEILR 116
Query: 91 LAICYIAYLNNVLE 104
LAICYI+YLN+VL+
Sbjct: 117 LAICYISYLNHVLD 130
>UNIPROTKB|E1BPH8 [details] [associations]
symbol:NHLH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00690000101643
CTD:4807 KO:K09075 OMA:MMLNSDA EMBL:DAAA02006986 IPI:IPI00691518
RefSeq:XP_002685912.1 RefSeq:XP_608662.2 Ensembl:ENSBTAT00000026673
GeneID:530196 KEGG:bta:530196 NextBio:20875204 Uniprot:E1BPH8
Length = 133
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 43/74 (58%), Positives = 47/74 (63%)
Query: 31 QALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILR 90
Q LS AT KYRTAHATRER+RVEAFN AF E SKIEILR
Sbjct: 59 QHLSREERRRRRRATAKYRTAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILR 118
Query: 91 LAICYIAYLNNVLE 104
LAICYI+YLN+VL+
Sbjct: 119 LAICYISYLNHVLD 132
>UNIPROTKB|E2QW01 [details] [associations]
symbol:NHLH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00690000101643 CTD:4807 KO:K09075 OMA:MMLNSDA
EMBL:AAEX03018463 RefSeq:XP_545756.1 ProteinModelPortal:E2QW01
Ensembl:ENSCAFT00000036175 GeneID:488639 KEGG:cfa:488639
NextBio:20861961 Uniprot:E2QW01
Length = 132
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 43/74 (58%), Positives = 47/74 (63%)
Query: 31 QALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILR 90
Q LS AT KYRTAHATRER+RVEAFN AF E SKIEILR
Sbjct: 58 QHLSREERRRRRRATAKYRTAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILR 117
Query: 91 LAICYIAYLNNVLE 104
LAICYI+YLN+VL+
Sbjct: 118 LAICYISYLNHVLD 131
>UNIPROTKB|Q02575 [details] [associations]
symbol:NHLH1 "Helix-loop-helix protein 1" species:9606
"Homo sapiens" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0007417 "central nervous system
development" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0030154
GO:GO:0006355 GO:GO:0003677 GO:GO:0007417 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:M97507 EMBL:BC013789
IPI:IPI00026245 PIR:B46167 RefSeq:NP_005589.1 UniGene:Hs.30956
ProteinModelPortal:Q02575 SMR:Q02575 IntAct:Q02575 STRING:Q02575
PhosphoSite:Q02575 DMDM:399885 PRIDE:Q02575 DNASU:4807
Ensembl:ENST00000302101 GeneID:4807 KEGG:hsa:4807 UCSC:uc001fwa.2
CTD:4807 GeneCards:GC01P160336 HGNC:HGNC:7817 HPA:CAB004755
HPA:CAB033854 HPA:HPA017943 MIM:162360 neXtProt:NX_Q02575
PharmGKB:PA31619 eggNOG:NOG264916 HOGENOM:HOG000016617
HOVERGEN:HBG016345 InParanoid:Q02575 KO:K09075 OMA:MMLNSDA
OrthoDB:EOG4KH2WQ PhylomeDB:Q02575 GenomeRNAi:4807 NextBio:18524
ArrayExpress:Q02575 Bgee:Q02575 CleanEx:HS_NHLH1
Genevestigator:Q02575 GermOnline:ENSG00000171786 Uniprot:Q02575
Length = 133
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 43/74 (58%), Positives = 47/74 (63%)
Query: 31 QALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILR 90
Q LS AT KYRTAHATRER+RVEAFN AF E SKIEILR
Sbjct: 59 QHLSREERRRRRRATAKYRTAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILR 118
Query: 91 LAICYIAYLNNVLE 104
LAICYI+YLN+VL+
Sbjct: 119 LAICYISYLNHVLD 132
>UNIPROTKB|F1RJY2 [details] [associations]
symbol:NHLH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00690000101643
KO:K09075 OMA:MMLNSDA EMBL:CU179691 RefSeq:XP_003125713.1
Ensembl:ENSSSCT00000006997 GeneID:100512227 KEGG:ssc:100512227
Uniprot:F1RJY2
Length = 133
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 43/74 (58%), Positives = 47/74 (63%)
Query: 31 QALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILR 90
Q LS AT KYRTAHATRER+RVEAFN AF E SKIEILR
Sbjct: 59 QHLSREERRRRRRATAKYRTAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILR 118
Query: 91 LAICYIAYLNNVLE 104
LAICYI+YLN+VL+
Sbjct: 119 LAICYISYLNHVLD 132
>MGI|MGI:98481 [details] [associations]
symbol:Nhlh1 "nescient helix loop helix 1" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 MGI:MGI:98481 GO:GO:0007275 GO:GO:0005634
GO:GO:0030154 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00690000101643
CTD:4807 eggNOG:NOG264916 HOGENOM:HOG000016617 HOVERGEN:HBG016345
KO:K09075 OMA:MMLNSDA OrthoDB:EOG4KH2WQ EMBL:M97506 EMBL:M82874
EMBL:BC051018 IPI:IPI00129437 PIR:A41788 RefSeq:NP_035046.1
UniGene:Mm.2474 ProteinModelPortal:Q02576 SMR:Q02576 STRING:Q02576
PhosphoSite:Q02576 PRIDE:Q02576 Ensembl:ENSMUST00000059794
GeneID:18071 KEGG:mmu:18071 UCSC:uc007dpj.2 InParanoid:Q02576
NextBio:293191 Bgee:Q02576 CleanEx:MM_NHLH1 Genevestigator:Q02576
GermOnline:ENSMUSG00000051251 Uniprot:Q02576
Length = 133
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 43/74 (58%), Positives = 47/74 (63%)
Query: 31 QALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILR 90
Q LS AT KYRTAHATRER+RVEAFN AF E SKIEILR
Sbjct: 59 QHLSREERRRRRRATAKYRTAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILR 118
Query: 91 LAICYIAYLNNVLE 104
LAICYI+YLN+VL+
Sbjct: 119 LAICYISYLNHVLD 132
>RGD|1310261 [details] [associations]
symbol:Nhlh1 "nescient helix loop helix 1" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:1310261 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CH473985 GeneTree:ENSGT00690000101643 CTD:4807 KO:K09075
OMA:MMLNSDA OrthoDB:EOG4KH2WQ IPI:IPI00212653 RefSeq:NP_001099440.1
UniGene:Rn.203557 Ensembl:ENSRNOT00000006862 GeneID:289230
KEGG:rno:289230 UCSC:RGD:1310261 NextBio:629428 Uniprot:D3ZN93
Length = 133
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 43/74 (58%), Positives = 47/74 (63%)
Query: 31 QALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILR 90
Q LS AT KYRTAHATRER+RVEAFN AF E SKIEILR
Sbjct: 59 QHLSREERRRRRRATAKYRTAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILR 118
Query: 91 LAICYIAYLNNVLE 104
LAICYI+YLN+VL+
Sbjct: 119 LAICYISYLNHVLD 132
>ZFIN|ZDB-GENE-040426-1809 [details] [associations]
symbol:nhlh2 "nescient helix loop helix 2"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-040426-1809
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CR936366
GeneTree:ENSGT00690000101643 eggNOG:NOG264916 HOGENOM:HOG000016617
HOVERGEN:HBG016345 KO:K09075 OrthoDB:EOG4KH2WQ CTD:4808
EMBL:BC065689 IPI:IPI00486364 RefSeq:NP_991232.1 UniGene:Dr.86665
Ensembl:ENSDART00000007630 GeneID:402968 KEGG:dre:402968
InParanoid:Q6P0A8 OMA:HEPLEAD NextBio:20816777 Uniprot:Q6P0A8
Length = 122
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 45/87 (51%), Positives = 53/87 (60%)
Query: 23 LDKSDGSTQAL-----SXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXX 77
L+ DG T+AL + AT KYR+AHATRER+RVEAFN AF E
Sbjct: 35 LEADDGKTRALVPAALTREEKRRRRRATAKYRSAHATRERIRVEAFNVAFAELRKLLPTL 94
Query: 78 XXXXXXSKIEILRLAICYIAYLNNVLE 104
SKIEILRLAICYI+YLN+VL+
Sbjct: 95 PPDKKLSKIEILRLAICYISYLNHVLD 121
>UNIPROTKB|H9L3K6 [details] [associations]
symbol:NHLH1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00690000101643
EMBL:AADN02074022 Ensembl:ENSGALT00000040741 Uniprot:H9L3K6
Length = 72
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 40/61 (65%), Positives = 44/61 (72%)
Query: 44 ATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
AT KYRTAHATRER+RVEAFN AF E SKIEILRLAICYI+YLN+VL
Sbjct: 11 ATAKYRTAHATRERIRVEAFNMAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 70
Query: 104 E 104
+
Sbjct: 71 D 71
>UNIPROTKB|E2RN55 [details] [associations]
symbol:NHLH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042698 "ovulation cycle" evidence=IEA]
[GO:0007617 "mating behavior" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007617 GO:GO:0042698 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00690000101643 KO:K09075 CTD:4808
OMA:THSDPES EMBL:AAEX03011000 RefSeq:XP_540253.3
Ensembl:ENSCAFT00000015511 GeneID:483135 KEGG:cfa:483135
NextBio:20857579 Uniprot:E2RN55
Length = 135
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 42/74 (56%), Positives = 47/74 (63%)
Query: 31 QALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILR 90
Q LS AT KYR+AHATRER+RVEAFN AF E SKIEILR
Sbjct: 61 QQLSREEKRRRRRATAKYRSAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILR 120
Query: 91 LAICYIAYLNNVLE 104
LAICYI+YLN+VL+
Sbjct: 121 LAICYISYLNHVLD 134
>UNIPROTKB|Q02577 [details] [associations]
symbol:NHLH2 "Helix-loop-helix protein 2" species:9606
"Homo sapiens" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007617 "mating behavior"
evidence=IEA] [GO:0042698 "ovulation cycle" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005667
"transcription factor complex" evidence=TAS] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IPI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0030154 GO:GO:0051091
GO:GO:0003677 GO:GO:0045944 GO:GO:0007617 GO:GO:0007417
GO:GO:0006351 GO:GO:0005667 GO:GO:0042698 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AL449264 eggNOG:NOG264916 HOGENOM:HOG000016617
HOVERGEN:HBG016345 KO:K09075 OrthoDB:EOG4KH2WQ EMBL:M97508
EMBL:AB007959 EMBL:BC096359 EMBL:BC096360 IPI:IPI00026246
PIR:B45075 RefSeq:NP_001104531.1 RefSeq:NP_005590.1
UniGene:Hs.46296 ProteinModelPortal:Q02577 SMR:Q02577 IntAct:Q02577
STRING:Q02577 PhosphoSite:Q02577 DMDM:399887 PRIDE:Q02577
DNASU:4808 Ensembl:ENST00000320238 Ensembl:ENST00000369506
GeneID:4808 KEGG:hsa:4808 UCSC:uc001efy.3 CTD:4808
GeneCards:GC01M116378 HGNC:HGNC:7818 MIM:162361 neXtProt:NX_Q02577
PharmGKB:PA31620 InParanoid:Q02577 OMA:THSDPES PhylomeDB:Q02577
GenomeRNAi:4808 NextBio:18528 ArrayExpress:Q02577 Bgee:Q02577
CleanEx:HS_NHLH2 Genevestigator:Q02577 GermOnline:ENSG00000177551
Uniprot:Q02577
Length = 135
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 42/74 (56%), Positives = 47/74 (63%)
Query: 31 QALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILR 90
Q LS AT KYR+AHATRER+RVEAFN AF E SKIEILR
Sbjct: 61 QQLSREEKRRRRRATAKYRSAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILR 120
Query: 91 LAICYIAYLNNVLE 104
LAICYI+YLN+VL+
Sbjct: 121 LAICYISYLNHVLD 134
>UNIPROTKB|F1SAW9 [details] [associations]
symbol:NHLH2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042698 "ovulation cycle" evidence=IEA] [GO:0007617
"mating behavior" evidence=IEA] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007617
GO:GO:0042698 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00690000101643 KO:K09075 OMA:THSDPES EMBL:CU407089
RefSeq:XP_001929557.1 Ensembl:ENSSSCT00000007389 GeneID:100152544
KEGG:ssc:100152544 Uniprot:F1SAW9
Length = 135
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 42/74 (56%), Positives = 47/74 (63%)
Query: 31 QALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILR 90
Q LS AT KYR+AHATRER+RVEAFN AF E SKIEILR
Sbjct: 61 QQLSREEKRRRRRATAKYRSAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILR 120
Query: 91 LAICYIAYLNNVLE 104
LAICYI+YLN+VL+
Sbjct: 121 LAICYISYLNHVLD 134
>MGI|MGI:97324 [details] [associations]
symbol:Nhlh2 "nescient helix loop helix 2" species:10090 "Mus
musculus" [GO:0001102 "RNA polymerase II activating transcription
factor binding" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007617
"mating behavior" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042698 "ovulation cycle" evidence=IMP]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
MGI:MGI:97324 GO:GO:0007275 GO:GO:0005634 GO:GO:0030154
GO:GO:0006355 GO:GO:0003677 GO:GO:0007617 GO:GO:0006351
GO:GO:0042698 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CH466608
GeneTree:ENSGT00690000101643 eggNOG:NOG264916 HOGENOM:HOG000016617
HOVERGEN:HBG016345 KO:K09075 OrthoDB:EOG4KH2WQ CTD:4808 OMA:THSDPES
EMBL:S40532 EMBL:AK031747 EMBL:AK053837 EMBL:AK079121 EMBL:AK082728
EMBL:AK084160 EMBL:AK140559 EMBL:AC166072 EMBL:BC058413
IPI:IPI00221482 IPI:IPI00315311 PIR:A49005 RefSeq:NP_848892.1
UniGene:Mm.137286 ProteinModelPortal:Q64221 IntAct:Q64221
STRING:Q64221 PhosphoSite:Q64221 PRIDE:Q64221
Ensembl:ENSMUST00000066187 GeneID:18072 KEGG:mmu:18072
InParanoid:Q64221 NextBio:293195 CleanEx:MM_NHLH2
Genevestigator:Q64221 GermOnline:ENSMUSG00000048540 Uniprot:Q64221
Length = 135
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 42/74 (56%), Positives = 47/74 (63%)
Query: 31 QALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILR 90
Q LS AT KYR+AHATRER+RVEAFN AF E SKIEILR
Sbjct: 61 QQLSREEKRRRRRATAKYRSAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILR 120
Query: 91 LAICYIAYLNNVLE 104
LAICYI+YLN+VL+
Sbjct: 121 LAICYISYLNHVLD 134
>RGD|1308294 [details] [associations]
symbol:Nhlh2 "nescient helix loop helix 2" species:10116 "Rattus
norvegicus" [GO:0001102 "RNA polymerase II activating transcription
factor binding" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007617 "mating behavior" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0042698 "ovulation cycle"
evidence=IEA;ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:1308294 GO:GO:0007617 GO:GO:0042698
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00690000101643
KO:K09075 OrthoDB:EOG4KH2WQ CTD:4808 OMA:THSDPES EMBL:CH474015
IPI:IPI00211315 RefSeq:NP_001099927.1 UniGene:Rn.126884
Ensembl:ENSRNOT00000021727 GeneID:295327 KEGG:rno:295327
UCSC:RGD:1308294 NextBio:639375 Uniprot:D4A265
Length = 135
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 42/74 (56%), Positives = 47/74 (63%)
Query: 31 QALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILR 90
Q LS AT KYR+AHATRER+RVEAFN AF E SKIEILR
Sbjct: 61 QQLSREEKRRRRRATAKYRSAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILR 120
Query: 91 LAICYIAYLNNVLE 104
LAICYI+YLN+VL+
Sbjct: 121 LAICYISYLNHVLD 134
>UNIPROTKB|E1BCX5 [details] [associations]
symbol:NHLH2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042698 "ovulation cycle" evidence=IEA] [GO:0007617
"mating behavior" evidence=IEA] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007617
GO:GO:0042698 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00690000101643 KO:K09075 CTD:4808 OMA:THSDPES
EMBL:DAAA02007425 IPI:IPI00711316 RefSeq:NP_001103473.1
UniGene:Bt.46270 Ensembl:ENSBTAT00000020056 GeneID:525699
KEGG:bta:525699 NextBio:20874219 Uniprot:E1BCX5
Length = 133
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 39/61 (63%), Positives = 44/61 (72%)
Query: 44 ATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
AT KYR+AHATRER+RVEAFN AF E SKIEILRLAICYI+YLN+VL
Sbjct: 72 ATAKYRSAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 131
Query: 104 E 104
+
Sbjct: 132 D 132
>WB|WBGene00001959 [details] [associations]
symbol:hlh-15 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0019915 "lipid storage" evidence=IMP] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=IPI]
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS] [GO:0001076 "RNA
polymerase II transcription factor binding transcription factor
activity" evidence=ISS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0019915
GO:GO:0000981 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001076
GeneTree:ENSGT00690000101643 eggNOG:NOG264916 HOGENOM:HOG000016617
EMBL:FO080845 PIR:T29995 RefSeq:NP_508440.1 UniGene:Cel.11190
ProteinModelPortal:Q18590 SMR:Q18590 IntAct:Q18590
EnsemblMetazoa:C43H6.8 GeneID:183427 KEGG:cel:CELE_C43H6.8
UCSC:C43H6.8 CTD:183427 WormBase:C43H6.8 InParanoid:Q18590
OMA:DTTSEEY NextBio:921098 Uniprot:Q18590
Length = 89
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 35/82 (42%), Positives = 46/82 (56%)
Query: 23 LDKSDGSTQALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXX 82
LD + + LS AT KYR HATRER+RVE+FN AF +
Sbjct: 8 LDTTSEEYRKLSKAERRKRRRATPKYRNLHATRERIRVESFNMAFSQLRALLPTLPVEKK 67
Query: 83 XSKIEILRLAICYIAYLNNVLE 104
SKIEILR +I YI++L+N+L+
Sbjct: 68 LSKIEILRFSIAYISFLDNLLQ 89
>UNIPROTKB|Q18590 [details] [associations]
symbol:hlh-15 "Protein HLH-15" species:6239 "Caenorhabditis
elegans" [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0019915
GO:GO:0000981 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001076
GeneTree:ENSGT00690000101643 eggNOG:NOG264916 HOGENOM:HOG000016617
EMBL:FO080845 PIR:T29995 RefSeq:NP_508440.1 UniGene:Cel.11190
ProteinModelPortal:Q18590 SMR:Q18590 IntAct:Q18590
EnsemblMetazoa:C43H6.8 GeneID:183427 KEGG:cel:CELE_C43H6.8
UCSC:C43H6.8 CTD:183427 WormBase:C43H6.8 InParanoid:Q18590
OMA:DTTSEEY NextBio:921098 Uniprot:Q18590
Length = 89
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 35/82 (42%), Positives = 46/82 (56%)
Query: 23 LDKSDGSTQALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXX 82
LD + + LS AT KYR HATRER+RVE+FN AF +
Sbjct: 8 LDTTSEEYRKLSKAERRKRRRATPKYRNLHATRERIRVESFNMAFSQLRALLPTLPVEKK 67
Query: 83 XSKIEILRLAICYIAYLNNVLE 104
SKIEILR +I YI++L+N+L+
Sbjct: 68 LSKIEILRFSIAYISFLDNLLQ 89
>UNIPROTKB|A6PVY9 [details] [associations]
symbol:NHLH2 "Helix-loop-helix protein 2" species:9606
"Homo sapiens" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0007617 "mating behavior" evidence=IEA]
[GO:0042698 "ovulation cycle" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 GO:GO:0007617 GO:GO:0042698
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL449264
HOGENOM:HOG000016617 HOVERGEN:HBG016345 UniGene:Hs.46296
HGNC:HGNC:7818 IPI:IPI00853619 SMR:A6PVY9 STRING:A6PVY9
Ensembl:ENST00000429731 Uniprot:A6PVY9
Length = 107
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/39 (61%), Positives = 26/39 (66%)
Query: 31 QALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGE 69
Q LS AT KYR+AHATRER+RVEAFN AF E
Sbjct: 61 QQLSREEKRRRRRATAKYRSAHATRERIRVEAFNLAFAE 99
>ZFIN|ZDB-GENE-000511-1 [details] [associations]
symbol:hand2 "heart and neural crest derivatives
expressed transcript 2" species:7955 "Danio rerio" [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003144
"embryonic heart tube formation" evidence=IMP] [GO:0003142
"cardiogenic plate morphogenesis" evidence=IMP] [GO:0035118
"embryonic pectoral fin morphogenesis" evidence=IMP] [GO:0035051
"cardiocyte differentiation" evidence=IMP] [GO:0030859 "polarized
epithelial cell differentiation" evidence=IMP] [GO:0003007 "heart
morphogenesis" evidence=IMP] [GO:0060047 "heart contraction"
evidence=IMP] [GO:0003342 "proepicardium development" evidence=IMP]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=IMP]
[GO:0030878 "thyroid gland development" evidence=IMP] [GO:0071908
"determination of intestine left/right asymmetry" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0010002 "cardioblast differentiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 ZFIN:ZDB-GENE-000511-1 GO:GO:0010002 GO:GO:0060047
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0035118 GO:GO:0048703
GO:GO:0030878 HOVERGEN:HBG051880 KO:K09071 GO:GO:0003144 CTD:9464
GO:GO:0003342 GO:GO:0030859 GO:GO:0003142 EMBL:BC083365
IPI:IPI00613094 RefSeq:NP_571701.2 UniGene:Dr.81423
ProteinModelPortal:Q5XJD8 STRING:Q5XJD8 DNASU:58150 GeneID:58150
KEGG:dre:58150 InParanoid:Q5XJD8 NextBio:20892399
ArrayExpress:Q5XJD8 GO:GO:0071908 Uniprot:Q5XJD8
Length = 208
Score = 94 (38.1 bits), Expect = 0.00019, P = 0.00019
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 45 TQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVLE 104
T K R +ER R ++ NSAF E SKI+ LRLA YIAYL ++L+
Sbjct: 88 TVKRRPTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDILD 147
>ZFIN|ZDB-GENE-081104-461 [details] [associations]
symbol:ferd3l "Fer3-like (Drosophila)" species:7955
"Danio rerio" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 ZFIN:ZDB-GENE-081104-461 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00680000099574 EMBL:CU638736
IPI:IPI00920294 Ensembl:ENSDART00000143231 Uniprot:F1R7I0
Length = 81
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 22/56 (39%), Positives = 29/56 (51%)
Query: 49 RTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVLE 104
R A RER R+ + N AF S+IE LRLAI YIA++ ++LE
Sbjct: 26 RQAANIRERKRMFSLNEAFDRLRRRVPTFAYEKRLSRIETLRLAIVYIAFMTDILE 81
>UNIPROTKB|P79782 [details] [associations]
symbol:TCF15 "Transcription factor 15" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0007275 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG036149 EMBL:U76665 EMBL:U72641
IPI:IPI00601841 RefSeq:NP_990277.1 UniGene:Gga.22945
ProteinModelPortal:P79782 PRIDE:P79782 GeneID:395788
KEGG:gga:395788 CTD:6939 KO:K09070 NextBio:20815856 Uniprot:P79782
Length = 183
Score = 91 (37.1 bits), Expect = 0.00030, P = 0.00030
Identities = 25/57 (43%), Positives = 29/57 (50%)
Query: 47 KYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
K R A RER R ++ N+AF SKIE LRLA YIA+L NVL
Sbjct: 61 KQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 117
>UNIPROTKB|F1RQC4 [details] [associations]
symbol:HAND1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060707 "trophoblast giant cell differentiation"
evidence=IEA] [GO:0060536 "cartilage morphogenesis" evidence=IEA]
[GO:0060485 "mesenchyme development" evidence=IEA] [GO:0060411
"cardiac septum morphogenesis" evidence=IEA] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043425 "bHLH transcription factor
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0003219 "cardiac right ventricle formation"
evidence=IEA] [GO:0003218 "cardiac left ventricle formation"
evidence=IEA] [GO:0003144 "embryonic heart tube formation"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0001829
"trophectodermal cell differentiation" evidence=IEA] [GO:0001707
"mesoderm formation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0001525 GO:GO:0000122 GO:GO:0044212 GO:GO:0003713
GO:GO:0006366 GO:GO:0001707 GO:GO:0001829 GO:GO:0042475
GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001947
GO:GO:0055010 GO:GO:0060411 GO:GO:0060707 GO:GO:0060536
GeneTree:ENSGT00690000101643 OMA:RPYFQSW GO:GO:0003218
GO:GO:0003219 GO:GO:0003144 GO:GO:0060485 EMBL:FP102668
Ensembl:ENSSSCT00000018586 Uniprot:F1RQC4
Length = 214
Score = 91 (37.1 bits), Expect = 0.00045, P = 0.00045
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 55 RERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
+ER R E+ NSAF E SKI+ LRLA YIAYL +VL
Sbjct: 105 KERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVL 153
>FB|FBgn0038402 [details] [associations]
symbol:Fer2 "48 related 2" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0048699 "generation of neurons"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:AE014297 GO:GO:0006355 GO:GO:0045475 GO:GO:0010628
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099574
GO:GO:0048699 FlyBase:FBgn0038402 RefSeq:NP_524376.2
UniGene:Dm.24068 ProteinModelPortal:Q9VEY3 SMR:Q9VEY3
EnsemblMetazoa:FBtr0301709 GeneID:41961 KEGG:dme:Dmel_CG5952
UCSC:CG5952-RA CTD:41961 InParanoid:Q9VEY3 OMA:LSSEPMC
PhylomeDB:Q9VEY3 GenomeRNAi:41961 NextBio:826485
ArrayExpress:Q9VEY3 Bgee:Q9VEY3 Uniprot:Q9VEY3
Length = 274
Score = 93 (37.8 bits), Expect = 0.00045, P = 0.00045
Identities = 25/58 (43%), Positives = 31/58 (53%)
Query: 49 RTAHATRERVRVEA-FNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVLET 105
R A RER R+++ NSAF E SKI+ LRLAI YI+ L VL+T
Sbjct: 149 RQAANVRERKRIQSSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREVLQT 206
>UNIPROTKB|O96004 [details] [associations]
symbol:HAND1 "Heart- and neural crest derivatives-expressed
protein 1" species:9606 "Homo sapiens" [GO:0001707 "mesoderm
formation" evidence=IEA] [GO:0003144 "embryonic heart tube
formation" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0060485 "mesenchyme development" evidence=IEA] [GO:0060536
"cartilage morphogenesis" evidence=IEA] [GO:0060707 "trophoblast
giant cell differentiation" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003218
"cardiac left ventricle formation" evidence=IMP] [GO:0003219
"cardiac right ventricle formation" evidence=IMP] [GO:0001824
"blastocyst development" evidence=IEP] [GO:0001829 "trophectodermal
cell differentiation" evidence=IEP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0043425 "bHLH transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0055010 "ventricular cardiac muscle tissue
morphogenesis" evidence=IMP] [GO:0060411 "cardiac septum
morphogenesis" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=ISS] [GO:0001947 "heart looping" evidence=ISS] [GO:0007507
"heart development" evidence=ISS] [GO:0035050 "embryonic heart tube
development" evidence=ISS] [GO:0042802 "identical protein binding"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=NAS] [GO:0003713 "transcription coactivator activity"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0005737 GO:GO:0042803
GO:GO:0005654 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0001525 GO:GO:0000122 GO:GO:0003713
GO:GO:0006366 GO:GO:0001707 GO:GO:0001829 GO:GO:0042475
GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001947
GO:GO:0055010 GO:GO:0060411 GO:GO:0060707 GO:GO:0060536 CTD:9421
eggNOG:NOG259520 HOGENOM:HOG000232082 HOVERGEN:HBG051880 KO:K09071
OMA:RPYFQSW OrthoDB:EOG4FTW1T GO:GO:0003218 GO:GO:0003219
GO:GO:0003144 GO:GO:0060485 EMBL:AF063012 EMBL:AF061756
EMBL:BC021190 IPI:IPI00014052 RefSeq:NP_004812.1 UniGene:Hs.152531
ProteinModelPortal:O96004 SMR:O96004 STRING:O96004
PhosphoSite:O96004 PRIDE:O96004 DNASU:9421 Ensembl:ENST00000231121
GeneID:9421 KEGG:hsa:9421 UCSC:uc003lvn.3 GeneCards:GC05M153834
HGNC:HGNC:4807 HPA:HPA040925 MIM:602406 neXtProt:NX_O96004
PharmGKB:PA29183 InParanoid:O96004 PhylomeDB:O96004 GenomeRNAi:9421
NextBio:35290 Bgee:O96004 CleanEx:HS_HAND1 Genevestigator:O96004
GermOnline:ENSG00000113196 Uniprot:O96004
Length = 215
Score = 91 (37.1 bits), Expect = 0.00046, P = 0.00046
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 55 RERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
+ER R E+ NSAF E SKI+ LRLA YIAYL +VL
Sbjct: 102 KERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVL 150
>MGI|MGI:103577 [details] [associations]
symbol:Hand1 "heart and neural crest derivatives expressed
transcript 1" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IGI] [GO:0001525 "angiogenesis" evidence=IMP]
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0001707 "mesoderm formation" evidence=IMP] [GO:0001709 "cell
fate determination" evidence=NAS] [GO:0001947 "heart looping"
evidence=IMP] [GO:0003007 "heart morphogenesis" evidence=NAS;TAS]
[GO:0003144 "embryonic heart tube formation" evidence=IMP]
[GO:0003218 "cardiac left ventricle formation" evidence=ISO]
[GO:0003219 "cardiac right ventricle formation" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007507 "heart development" evidence=IGI;IMP]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0030154 "cell
differentiation" evidence=IGI] [GO:0035050 "embryonic heart tube
development" evidence=IMP] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IGI] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0043425 "bHLH
transcription factor binding" evidence=ISO;IPI] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0055010 "ventricular
cardiac muscle tissue morphogenesis" evidence=ISO;IMP] [GO:0060411
"cardiac septum morphogenesis" evidence=ISO] [GO:0060485
"mesenchyme development" evidence=IGI] [GO:0060536 "cartilage
morphogenesis" evidence=IGI] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IMP] [GO:0061371 "determination of heart
left/right asymmetry" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 MGI:MGI:103577 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0001525 GO:GO:0000122 GO:GO:0044212
GO:GO:0003713 GO:GO:0006366 GO:GO:0001707 GO:GO:0001829
GO:GO:0042475 GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0001947 GO:GO:0001709 GO:GO:0055010 GO:GO:0060411
GO:GO:0060707 GO:GO:0060536 CTD:9421 eggNOG:NOG259520
GeneTree:ENSGT00690000101643 HOGENOM:HOG000232082
HOVERGEN:HBG051880 KO:K09071 OMA:RPYFQSW OrthoDB:EOG4FTW1T
GO:GO:0003218 GO:GO:0003219 GO:GO:0003144 GO:GO:0060485 EMBL:U21226
EMBL:S79216 EMBL:U43714 IPI:IPI00132280 RefSeq:NP_032239.1
UniGene:Mm.4746 ProteinModelPortal:Q64279 SMR:Q64279 DIP:DIP-455N
IntAct:Q64279 STRING:Q64279 PhosphoSite:Q64279 PRIDE:Q64279
Ensembl:ENSMUST00000036917 Ensembl:ENSMUST00000160392 GeneID:15110
KEGG:mmu:15110 InParanoid:Q64279 NextBio:287510 Bgee:Q64279
Genevestigator:Q64279 GermOnline:ENSMUSG00000037335 Uniprot:Q64279
Length = 216
Score = 91 (37.1 bits), Expect = 0.00046, P = 0.00046
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 55 RERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
+ER R E+ NSAF E SKI+ LRLA YIAYL +VL
Sbjct: 102 KERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVL 150
>RGD|621206 [details] [associations]
symbol:Hand1 "heart and neural crest derivatives expressed 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001707 "mesoderm
formation" evidence=IEA;ISO] [GO:0001824 "blastocyst development"
evidence=ISO] [GO:0001829 "trophectodermal cell differentiation"
evidence=IEA;ISO] [GO:0001947 "heart looping" evidence=IEA;ISO]
[GO:0003144 "embryonic heart tube formation" evidence=IEA;ISO]
[GO:0003218 "cardiac left ventricle formation" evidence=IEA;ISO]
[GO:0003219 "cardiac right ventricle formation" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0030154 "cell differentiation"
evidence=ISO] [GO:0035050 "embryonic heart tube development"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA;ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=IEA;ISO]
[GO:0060411 "cardiac septum morphogenesis" evidence=IEA;ISO]
[GO:0060485 "mesenchyme development" evidence=IEA;ISO] [GO:0060536
"cartilage morphogenesis" evidence=IEA;ISO] [GO:0060707
"trophoblast giant cell differentiation" evidence=IEA;ISO]
[GO:0061371 "determination of heart left/right asymmetry"
evidence=ISO] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:621206 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0001525 GO:GO:0000122
GO:GO:0044212 GO:GO:0003713 GO:GO:0006366 GO:GO:0001707
GO:GO:0001829 GO:GO:0042475 GO:GO:0043433 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0055010 GO:GO:0060411
GO:GO:0060707 GO:GO:0060536 CTD:9421 eggNOG:NOG259520
GeneTree:ENSGT00690000101643 HOGENOM:HOG000232082
HOVERGEN:HBG051880 KO:K09071 OMA:RPYFQSW OrthoDB:EOG4FTW1T
GO:GO:0003218 GO:GO:0003219 GO:GO:0003144 GO:GO:0060485 EMBL:Y08140
EMBL:BC097324 IPI:IPI00208642 RefSeq:NP_067603.1 UniGene:Rn.224598
UniGene:Rn.39340 ProteinModelPortal:P97832 STRING:P97832
Ensembl:ENSRNOT00000003486 GeneID:59112 KEGG:rno:59112
UCSC:RGD:621206 InParanoid:P97832 NextBio:611755
Genevestigator:P97832 GermOnline:ENSRNOG00000002582 Uniprot:P97832
Length = 216
Score = 91 (37.1 bits), Expect = 0.00046, P = 0.00046
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 55 RERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
+ER R E+ NSAF E SKI+ LRLA YIAYL +VL
Sbjct: 102 KERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVL 150
>UNIPROTKB|Q0VCE2 [details] [associations]
symbol:HAND1 "Heart- and neural crest derivatives-expressed
protein 1" species:9913 "Bos taurus" [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043425 "bHLH transcription factor
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003219 "cardiac right ventricle formation" evidence=IEA]
[GO:0003218 "cardiac left ventricle formation" evidence=IEA]
[GO:0003144 "embryonic heart tube formation" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001829
"trophectodermal cell differentiation" evidence=IEA] [GO:0001707
"mesoderm formation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0060707 "trophoblast giant cell differentiation" evidence=IEA]
[GO:0060536 "cartilage morphogenesis" evidence=IEA] [GO:0060485
"mesenchyme development" evidence=IEA] [GO:0060411 "cardiac septum
morphogenesis" evidence=IEA] [GO:0055010 "ventricular cardiac
muscle tissue morphogenesis" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0001525 GO:GO:0000122
GO:GO:0044212 GO:GO:0003713 GO:GO:0006366 GO:GO:0001707
GO:GO:0001829 GO:GO:0042475 GO:GO:0043433 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0055010 GO:GO:0060411
GO:GO:0060707 GO:GO:0060536 EMBL:BC120210 IPI:IPI00709781
RefSeq:NP_001069229.1 UniGene:Bt.46230 ProteinModelPortal:Q0VCE2
STRING:Q0VCE2 PRIDE:Q0VCE2 Ensembl:ENSBTAT00000003015 GeneID:517952
KEGG:bta:517952 CTD:9421 eggNOG:NOG259520
GeneTree:ENSGT00690000101643 HOGENOM:HOG000232082
HOVERGEN:HBG051880 InParanoid:Q0VCE2 KO:K09071 OMA:RPYFQSW
OrthoDB:EOG4FTW1T NextBio:20872546 ArrayExpress:Q0VCE2
GO:GO:0003218 GO:GO:0003219 GO:GO:0003144 GO:GO:0060485
Uniprot:Q0VCE2
Length = 218
Score = 91 (37.1 bits), Expect = 0.00047, P = 0.00047
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 55 RERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
+ER R E+ NSAF E SKI+ LRLA YIAYL +VL
Sbjct: 105 KERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVL 153
>UNIPROTKB|E2RPA0 [details] [associations]
symbol:HAND1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060707 "trophoblast giant cell
differentiation" evidence=IEA] [GO:0060536 "cartilage
morphogenesis" evidence=IEA] [GO:0060485 "mesenchyme development"
evidence=IEA] [GO:0060411 "cardiac septum morphogenesis"
evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003219 "cardiac right ventricle formation" evidence=IEA]
[GO:0003218 "cardiac left ventricle formation" evidence=IEA]
[GO:0003144 "embryonic heart tube formation" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001829
"trophectodermal cell differentiation" evidence=IEA] [GO:0001707
"mesoderm formation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0001525 GO:GO:0000122 GO:GO:0044212 GO:GO:0003713
GO:GO:0006366 GO:GO:0001707 GO:GO:0001829 GO:GO:0042475
GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001947
GO:GO:0055010 GO:GO:0060411 GO:GO:0060707 GO:GO:0060536 CTD:9421
GeneTree:ENSGT00690000101643 KO:K09071 OMA:RPYFQSW GO:GO:0003218
GO:GO:0003219 GO:GO:0003144 GO:GO:0060485 EMBL:AAEX03003075
RefSeq:XP_546282.3 Ensembl:ENSCAFT00000027975 GeneID:489164
KEGG:cfa:489164 NextBio:20862373 Uniprot:E2RPA0
Length = 218
Score = 91 (37.1 bits), Expect = 0.00047, P = 0.00047
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 55 RERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
+ER R E+ NSAF E SKI+ LRLA YIAYL +VL
Sbjct: 105 KERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVL 153
>ZFIN|ZDB-GENE-980605-20 [details] [associations]
symbol:par1 "paraxis" species:7955 "Danio rerio"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-980605-20 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOVERGEN:HBG036149 KO:K09070 EMBL:AJ006310 IPI:IPI00507600
RefSeq:NP_571047.1 UniGene:Dr.81253 ProteinModelPortal:Q9YHA3
GeneID:30159 KEGG:dre:30159 CTD:145624 InParanoid:Q9YHA3
NextBio:20806630 ArrayExpress:Q9YHA3 Uniprot:Q9YHA3
Length = 183
Score = 89 (36.4 bits), Expect = 0.00051, P = 0.00051
Identities = 24/57 (42%), Positives = 29/57 (50%)
Query: 47 KYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
K R A RER R ++ N+AF SKIE LRLA YI++L NVL
Sbjct: 64 KQRNAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYISHLANVL 120
>UNIPROTKB|Q90691 [details] [associations]
symbol:HAND1 "Heart- and neural crest derivatives-expressed
protein 1" species:9031 "Gallus gallus" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:9421
HOVERGEN:HBG051880 KO:K09071 EMBL:U40041 IPI:IPI00578038
RefSeq:NP_990296.1 UniGene:Gga.478 ProteinModelPortal:Q90691
GeneID:395812 KEGG:gga:395812 NextBio:20815880 Uniprot:Q90691
Length = 202
Score = 90 (36.7 bits), Expect = 0.00051, P = 0.00051
Identities = 23/49 (46%), Positives = 26/49 (53%)
Query: 55 RERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
+ER R E+ NSAF E SKI+ LRLA YIAYL VL
Sbjct: 91 KERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMEVL 139
>ZFIN|ZDB-GENE-050208-498 [details] [associations]
symbol:si:ch211-246m6.4 "si:ch211-246m6.4"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-050208-498
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:BX649296
GeneTree:ENSGT00690000101643 RefSeq:XP_001340709.1
Ensembl:ENSDART00000140323 GeneID:100000527 Uniprot:K7DYE4
Length = 193
Score = 88 (36.0 bits), Expect = 0.00076, P = 0.00076
Identities = 24/57 (42%), Positives = 28/57 (49%)
Query: 47 KYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
K R A RER R + N+AF SKIE LRLA YI++L NVL
Sbjct: 83 KQRQAANARERDRTHSVNTAFTSLRTLIPTEPADRKLSKIETLRLASSYISHLANVL 139
>MGI|MGI:104664 [details] [associations]
symbol:Tcf15 "transcription factor 15" species:10090 "Mus
musculus" [GO:0001756 "somitogenesis" evidence=IMP] [GO:0003016
"respiratory system process" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IMP] [GO:0016265 "death" evidence=IMP] [GO:0036342
"post-anal tail morphogenesis" evidence=IMP] [GO:0042755 "eating
behavior" evidence=IMP] [GO:0043583 "ear development" evidence=IMP]
[GO:0043588 "skin development" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048339 "paraxial mesoderm
development" evidence=IMP] [GO:0048644 "muscle organ morphogenesis"
evidence=IMP] [GO:0048705 "skeletal system morphogenesis"
evidence=IMP] [GO:0050884 "neuromuscular process controlling
posture" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 MGI:MGI:104664 GO:GO:0005634
GO:GO:0043588 GO:GO:0006355 GO:GO:0048644 GO:GO:0003677
GO:GO:0042755 GO:GO:0006351 GO:GO:0001756 GO:GO:0003016
GO:GO:0016265 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048705
GO:GO:0036342 GO:GO:0043583 GO:GO:0050884 GO:GO:0048339
GeneTree:ENSGT00690000101643 HOVERGEN:HBG036149
HOGENOM:HOG000231706 OrthoDB:EOG4ZPDWJ CTD:6939 KO:K09070
eggNOG:NOG246787 OMA:NQRKGGS EMBL:U18658 EMBL:BC027533 EMBL:U20164
IPI:IPI00222980 RefSeq:NP_033354.2 UniGene:Mm.3881
ProteinModelPortal:Q60756 SMR:Q60756 STRING:Q60756
PhosphoSite:Q60756 PaxDb:Q60756 PRIDE:Q60756
Ensembl:ENSMUST00000089112 GeneID:21407 KEGG:mmu:21407
InParanoid:Q60756 NextBio:300680 Bgee:Q60756 CleanEx:MM_TCF15
Genevestigator:Q60756 GermOnline:ENSMUSG00000068079 Uniprot:Q60756
Length = 195
Score = 88 (36.0 bits), Expect = 0.00078, P = 0.00078
Identities = 24/57 (42%), Positives = 29/57 (50%)
Query: 47 KYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
+ R A RER R ++ N+AF SKIE LRLA YIA+L NVL
Sbjct: 70 RQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 126
>RGD|1308464 [details] [associations]
symbol:Tcf15 "transcription factor 15" species:10116 "Rattus
norvegicus" [GO:0001756 "somitogenesis" evidence=IEA;ISO]
[GO:0003016 "respiratory system process" evidence=IEA;ISO]
[GO:0007517 "muscle organ development" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0016265 "death" evidence=IEA;ISO] [GO:0036342 "post-anal tail
morphogenesis" evidence=IEA;ISO] [GO:0042755 "eating behavior"
evidence=IEA;ISO] [GO:0043583 "ear development" evidence=IEA;ISO]
[GO:0043588 "skin development" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0048339 "paraxial
mesoderm development" evidence=IEA;ISO] [GO:0048644 "muscle organ
morphogenesis" evidence=IEA;ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0050884 "neuromuscular process
controlling posture" evidence=IEA;ISO] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 RGD:1308464
GO:GO:0043588 GO:GO:0048644 GO:GO:0042755 GO:GO:0001756
GO:GO:0003016 GO:GO:0016265 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0048705 GO:GO:0043583 GO:GO:0050884 GO:GO:0048339
GeneTree:ENSGT00690000101643 OrthoDB:EOG4ZPDWJ CTD:6939 KO:K09070
OMA:NQRKGGS IPI:IPI00210990 RefSeq:NP_001162051.1 UniGene:Rn.222438
Ensembl:ENSRNOT00000000013 GeneID:296272 KEGG:rno:296272
UCSC:RGD:1308464 NextBio:640896 Uniprot:D3ZEK9
Length = 195
Score = 88 (36.0 bits), Expect = 0.00078, P = 0.00078
Identities = 24/57 (42%), Positives = 29/57 (50%)
Query: 47 KYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
+ R A RER R ++ N+AF SKIE LRLA YIA+L NVL
Sbjct: 70 RQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 126
>UNIPROTKB|A2VE98 [details] [associations]
symbol:TCF15 "Transcription factor 15 (Basic
helix-loop-helix)" species:9913 "Bos taurus" [GO:0050884
"neuromuscular process controlling posture" evidence=IEA]
[GO:0048705 "skeletal system morphogenesis" evidence=IEA]
[GO:0048644 "muscle organ morphogenesis" evidence=IEA] [GO:0048339
"paraxial mesoderm development" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0043583 "ear development"
evidence=IEA] [GO:0042755 "eating behavior" evidence=IEA]
[GO:0036342 "post-anal tail morphogenesis" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0003016 "respiratory system
process" evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0043588 GO:GO:0048644 GO:GO:0042755 GO:GO:0001756
GO:GO:0003016 GO:GO:0016265 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0048705 GO:GO:0043583 GO:GO:0050884 GO:GO:0048339
GeneTree:ENSGT00690000101643 HOVERGEN:HBG036149
HOGENOM:HOG000231706 OrthoDB:EOG4ZPDWJ CTD:6939 KO:K09070
eggNOG:NOG246787 OMA:NQRKGGS EMBL:DAAA02036374 EMBL:BC133638
IPI:IPI00695822 RefSeq:NP_001075190.1 UniGene:Bt.63520
Ensembl:ENSBTAT00000007554 GeneID:518491 KEGG:bta:518491
InParanoid:A2VE98 NextBio:20872665 Uniprot:A2VE98
Length = 197
Score = 88 (36.0 bits), Expect = 0.00081, P = 0.00081
Identities = 24/57 (42%), Positives = 29/57 (50%)
Query: 47 KYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
+ R A RER R ++ N+AF SKIE LRLA YIA+L NVL
Sbjct: 70 RQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 126
>UNIPROTKB|F1S863 [details] [associations]
symbol:TCF15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0048339 "paraxial mesoderm development"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0043583 "ear development" evidence=IEA] [GO:0042755 "eating
behavior" evidence=IEA] [GO:0036342 "post-anal tail morphogenesis"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0003016
"respiratory system process" evidence=IEA] [GO:0001756
"somitogenesis" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0043588 GO:GO:0048644
GO:GO:0042755 GO:GO:0001756 GO:GO:0003016 GO:GO:0016265
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048705 GO:GO:0043583
GO:GO:0050884 GO:GO:0048339 GeneTree:ENSGT00690000101643 KO:K09070
OMA:NQRKGGS EMBL:CU606951 RefSeq:XP_003134406.1 UniGene:Ssc.45238
Ensembl:ENSSSCT00000007881 GeneID:100517249 KEGG:ssc:100517249
Uniprot:F1S863
Length = 197
Score = 88 (36.0 bits), Expect = 0.00081, P = 0.00081
Identities = 24/57 (42%), Positives = 29/57 (50%)
Query: 47 KYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
+ R A RER R ++ N+AF SKIE LRLA YIA+L NVL
Sbjct: 70 RQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 126
>UNIPROTKB|E2RI49 [details] [associations]
symbol:TCF15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050884 "neuromuscular process controlling
posture" evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0048339 "paraxial mesoderm development"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0043583 "ear development" evidence=IEA] [GO:0042755 "eating
behavior" evidence=IEA] [GO:0036342 "post-anal tail morphogenesis"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0003016
"respiratory system process" evidence=IEA] [GO:0001756
"somitogenesis" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0043588 GO:GO:0048644
GO:GO:0042755 GO:GO:0001756 GO:GO:0003016 GO:GO:0016265
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048705 GO:GO:0043583
GO:GO:0050884 GO:GO:0048339 GeneTree:ENSGT00690000101643 CTD:6939
KO:K09070 OMA:NQRKGGS EMBL:AAEX03013859 RefSeq:XP_852061.1
Ensembl:ENSCAFT00000011122 GeneID:609667 KEGG:cfa:609667
NextBio:20895256 Uniprot:E2RI49
Length = 202
Score = 88 (36.0 bits), Expect = 0.00086, P = 0.00086
Identities = 24/57 (42%), Positives = 29/57 (50%)
Query: 47 KYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXXXXSKIEILRLAICYIAYLNNVL 103
+ R A RER R ++ N+AF SKIE LRLA YIA+L NVL
Sbjct: 75 RQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 131
>ZFIN|ZDB-GENE-081104-410 [details] [associations]
symbol:si:dkey-34f9.3 "si:dkey-34f9.3" species:7955
"Danio rerio" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 ZFIN:ZDB-GENE-081104-410 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00680000099574 EMBL:BX897692
IPI:IPI00890406 Ensembl:ENSDART00000113597 Uniprot:F1RE90
Length = 207
Score = 88 (36.0 bits), Expect = 0.00091, P = 0.00091
Identities = 29/82 (35%), Positives = 36/82 (43%)
Query: 22 LLDKSDGSTQALSXXXXXXXXXATQKYRTAHATRERVRVEAFNSAFGEXXXXXXXXXXXX 81
LLD+ TQ Q++ A RER R+ + NSAF E
Sbjct: 87 LLDEPHEMTQQQQRCLATHHPYKVQRH--AANIRERKRMLSINSAFEELRCHVPTFPYEK 144
Query: 82 XXSKIEILRLAICYIAYLNNVL 103
SKI+ LRLAI YIA L +L
Sbjct: 145 RLSKIDTLRLAIAYIALLREIL 166
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.130 0.353 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 105 82 0.00091 102 3 10 22 0.37 29
29 0.43 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 543 (58 KB)
Total size of DFA: 112 KB (2075 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.40u 0.09s 8.49t Elapsed: 00:00:02
Total cpu time: 8.40u 0.09s 8.49t Elapsed: 00:00:02
Start: Thu Aug 15 12:30:25 2013 End: Thu Aug 15 12:30:27 2013