Query psy8087
Match_columns 658
No_of_seqs 545 out of 2973
Neff 7.1
Searched_HMMs 13730
Date Fri Aug 16 18:07:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8087.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/8087hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1eova2 d.104.1.1 (A:205-557) 100.0 5.1E-75 3.7E-79 623.1 17.2 300 137-446 23-346 (353)
2 d1e1oa2 d.104.1.1 (A:161-502) 100.0 1.8E-71 1.3E-75 593.2 16.8 296 139-445 3-338 (342)
3 d1b8aa2 d.104.1.1 (A:104-438) 100.0 6E-71 4.4E-75 587.5 16.3 299 138-446 14-328 (335)
4 d1n9wa2 d.104.1.1 (A:111-414) 100.0 4E-70 2.9E-74 573.6 15.5 289 147-445 1-304 (304)
5 d1c0aa3 d.104.1.1 (A:107-287,A 100.0 3.3E-68 2.4E-72 568.0 9.1 288 138-449 12-320 (346)
6 d1l0wa3 d.104.1.1 (A:105-294,A 100.0 1.9E-67 1.4E-71 564.0 14.6 288 138-449 20-329 (356)
7 d1nnha_ d.104.1.1 (A:) Hypothe 100.0 4.1E-66 3E-70 538.6 18.9 267 150-450 3-289 (293)
8 d1l0wa1 b.40.4.1 (A:1-104) Asp 99.8 2.7E-18 2E-22 149.3 15.1 90 508-598 12-103 (104)
9 d1e1oa1 b.40.4.1 (A:11-153) Ly 99.8 2.6E-18 1.9E-22 158.0 14.9 124 470-600 3-140 (143)
10 d1n9wa1 b.40.4.1 (A:1-93) Aspa 99.8 5.1E-18 3.7E-22 145.0 15.1 88 502-600 3-90 (93)
11 d1c0aa1 b.40.4.1 (A:1-106) Asp 99.7 1E-17 7.6E-22 146.3 14.5 90 508-598 11-105 (106)
12 d1b8aa1 b.40.4.1 (A:1-103) Asp 99.7 1.7E-17 1.3E-21 144.2 14.7 88 508-599 12-102 (103)
13 d1eova1 b.40.4.1 (A:71-204) As 99.7 3.1E-17 2.3E-21 149.5 15.3 102 499-600 21-132 (134)
14 d1b8aa1 b.40.4.1 (A:1-103) Asp 99.4 2.5E-13 1.9E-17 117.5 11.9 86 53-143 3-93 (103)
15 d1c0aa1 b.40.4.1 (A:1-106) Asp 99.4 5.5E-13 4E-17 115.9 12.2 78 54-136 3-81 (106)
16 d1l0wa1 b.40.4.1 (A:1-104) Asp 99.4 7.6E-13 5.6E-17 114.5 11.0 77 53-135 3-80 (104)
17 d1e1oa1 b.40.4.1 (A:11-153) Ly 99.4 6.5E-13 4.7E-17 121.5 10.8 96 47-143 24-130 (143)
18 d1eova1 b.40.4.1 (A:71-204) As 99.3 7.7E-12 5.6E-16 113.3 13.1 78 67-144 33-123 (134)
19 d1n9wa1 b.40.4.1 (A:1-93) Aspa 99.3 7.8E-12 5.7E-16 106.0 11.3 68 68-143 11-80 (93)
20 d1eova2 d.104.1.1 (A:205-557) 99.0 6.7E-11 4.9E-15 124.1 2.7 49 610-658 21-69 (353)
21 d1l0wa3 d.104.1.1 (A:105-294,A 99.0 1E-10 7.3E-15 122.8 3.9 49 610-658 17-65 (356)
22 d1jjca_ d.104.1.1 (A:) Phenyl- 98.9 5.1E-09 3.7E-13 104.1 14.2 107 160-268 24-161 (266)
23 d12asa_ d.104.1.1 (A:) Asparag 98.2 1.9E-05 1.4E-09 77.8 18.1 258 167-444 22-313 (327)
24 d1kmma2 d.104.1.1 (A:4-325) Hi 97.8 0.00012 8.5E-09 74.2 15.0 92 160-252 24-133 (322)
25 d1qe0a2 d.104.1.1 (A:1-325) Hi 97.8 3.9E-05 2.9E-09 78.0 11.0 92 160-252 24-135 (325)
26 d1nyra4 d.104.1.1 (A:242-532) 97.3 0.00031 2.3E-08 70.3 9.0 106 160-267 38-165 (291)
27 d1z7ma1 d.104.1.1 (A:6-323) AT 97.2 0.00027 2E-08 71.3 8.3 92 160-252 23-130 (318)
28 d1qf6a4 d.104.1.1 (A:242-532) 97.0 0.0008 5.8E-08 67.2 9.2 112 160-273 38-168 (291)
29 d1hc7a2 d.104.1.1 (A:5-276) Pr 96.6 0.0057 4.1E-07 59.6 11.7 107 160-267 48-178 (272)
30 d1wu7a2 d.104.1.1 (A:3-329) Hi 96.1 0.013 9.6E-07 58.7 11.1 90 160-252 26-131 (327)
31 d1b76a2 d.104.1.1 (A:1-394) Gl 95.8 0.0071 5.2E-07 61.2 7.5 108 160-270 47-200 (331)
32 d1h4vb2 d.104.1.1 (B:2-325) Hi 95.6 0.025 1.8E-06 56.4 10.9 92 160-252 24-134 (324)
33 d1seta2 d.104.1.1 (A:111-421) 95.4 0.042 3E-06 54.7 11.8 106 160-267 64-192 (311)
34 d1nj8a3 d.104.1.1 (A:0-267) Pr 95.4 0.035 2.5E-06 54.1 11.0 104 160-265 43-173 (268)
35 d1nnxa_ b.40.10.1 (A:) Hypothe 94.9 0.095 6.9E-06 43.5 10.3 73 509-595 33-106 (106)
36 d2pi2a1 b.40.4.3 (A:44-171) Re 94.8 0.099 7.2E-06 44.9 10.9 78 513-597 29-108 (128)
37 d1nj1a3 d.104.1.1 (A:19-283) P 93.8 0.075 5.5E-06 51.3 8.6 102 160-264 41-169 (265)
38 d1usya_ d.104.1.1 (A:) ATP pho 93.7 0.091 6.6E-06 51.1 9.2 82 162-251 12-100 (275)
39 d1jmca1 b.40.4.3 (A:183-298) R 93.0 0.096 7E-06 44.1 7.0 95 503-599 4-108 (116)
40 d2pi2e1 b.40.4.3 (E:3-117) Rep 92.6 0.38 2.7E-05 40.4 10.3 77 502-597 10-87 (115)
41 d1o7ia_ b.40.4.3 (A:) Archaeal 91.9 0.59 4.3E-05 38.9 10.7 85 503-598 4-96 (115)
42 d2pi2a1 b.40.4.3 (A:44-171) Re 91.4 0.23 1.7E-05 42.4 7.6 66 69-135 27-94 (128)
43 d1nnxa_ b.40.10.1 (A:) Hypothe 89.4 0.28 2E-05 40.6 5.9 59 68-133 34-92 (106)
44 d1v1qa_ b.40.4.3 (A:) Primosom 88.4 3.3 0.00024 33.9 12.3 84 513-598 7-107 (111)
45 d1g5ha2 d.104.1.1 (A:41-330) T 87.9 0.29 2.1E-05 47.9 6.0 70 197-267 110-193 (290)
46 d1gm5a2 b.40.4.9 (A:106-285) R 85.6 0.62 4.5E-05 41.7 6.6 65 68-133 58-125 (180)
47 d3ulla_ b.40.4.3 (A:) ssDNA-bi 83.6 3.6 0.00026 33.6 10.2 82 514-595 7-115 (115)
48 d1atia2 d.104.1.1 (A:1-394) Gl 83.2 0.83 6E-05 46.2 6.8 34 220-256 212-249 (394)
49 d1jmca1 b.40.4.3 (A:183-298) R 80.4 0.92 6.7E-05 37.7 5.0 61 71-132 13-82 (116)
50 d2pi2e1 b.40.4.3 (E:3-117) Rep 79.5 2.2 0.00016 35.3 7.2 55 68-132 18-73 (115)
51 d1se8a_ b.40.4.3 (A:) ssDNA-bi 79.3 3.2 0.00024 38.4 9.2 85 514-599 5-111 (231)
52 d1wjja_ b.40.4.3 (A:) Hypothet 73.4 16 0.0011 31.1 11.4 87 498-595 13-117 (145)
53 d1o7ia_ b.40.4.3 (A:) Archaeal 73.4 5.8 0.00042 32.4 8.2 67 71-142 13-87 (115)
54 d1se8a_ b.40.4.3 (A:) ssDNA-bi 71.2 9.9 0.00072 34.9 10.3 83 513-597 128-231 (231)
55 d1h4vb2 d.104.1.1 (B:2-325) Hi 69.7 1.6 0.00012 42.4 4.4 51 364-435 265-318 (324)
56 d1sr3a_ b.40.9.1 (A:) Heme cha 66.4 14 0.001 30.2 9.0 75 510-600 26-103 (114)
57 d1sr3a_ b.40.9.1 (A:) Heme cha 65.0 14 0.001 30.1 8.8 59 68-132 26-88 (114)
58 d2b3ga1 b.40.4.3 (A:3-114) Rep 64.9 18 0.0013 29.3 9.4 62 533-598 41-103 (112)
59 d1gm5a2 b.40.4.9 (A:106-285) R 64.5 3.5 0.00025 36.5 5.2 64 510-574 58-124 (180)
60 d1z7ma1 d.104.1.1 (A:6-323) AT 63.6 2.2 0.00016 41.4 3.8 47 366-434 268-315 (318)
61 d1ltla_ b.40.4.11 (A:) DNA rep 62.9 2.7 0.0002 39.2 4.2 48 543-595 192-239 (239)
62 d1j6qa_ b.40.9.1 (A:) Heme cha 55.5 34 0.0024 27.1 9.2 58 509-572 23-85 (100)
63 d1ue1a_ b.40.4.3 (A:) ssDNA-bi 55.0 30 0.0022 27.7 9.3 80 513-593 3-105 (118)
64 d1hc7a2 d.104.1.1 (A:5-276) Pr 53.2 3.8 0.00028 38.3 3.4 27 632-658 39-65 (272)
65 d1jjcb5 d.104.1.1 (B:475-681) 47.6 6.7 0.00049 35.4 4.1 72 160-231 22-107 (207)
66 d1j5wa_ d.104.1.1 (A:) Glycyl- 47.6 3.6 0.00026 38.7 2.1 57 362-443 122-179 (281)
67 d1nj8a3 d.104.1.1 (A:0-267) Pr 46.4 5.6 0.00041 37.5 3.4 27 632-658 34-60 (268)
68 d1wjja_ b.40.4.3 (A:) Hypothet 44.9 76 0.0055 26.4 10.5 67 71-142 27-111 (145)
69 d3ulla_ b.40.4.3 (A:) ssDNA-bi 42.4 39 0.0029 26.8 7.9 62 72-133 7-92 (115)
70 d1riqa2 d.104.1.1 (A:1-236) Al 40.0 4.9 0.00035 37.4 1.7 91 160-264 9-114 (236)
71 d1qvca_ b.40.4.3 (A:) ssDNA-bi 36.8 43 0.0031 27.9 7.5 82 514-596 7-113 (145)
72 d1ue1a_ b.40.4.3 (A:) ssDNA-bi 33.9 63 0.0046 25.6 7.9 61 72-133 4-84 (118)
73 d1fr3a_ b.40.6.1 (A:) Molybdat 33.3 63 0.0046 23.0 7.0 50 516-569 8-57 (67)
74 d1h9ra2 b.40.6.2 (A:200-261) C 31.9 80 0.0058 22.3 7.4 47 516-568 3-50 (62)
75 d1qvca_ b.40.4.3 (A:) ssDNA-bi 31.6 52 0.0038 27.3 7.2 61 72-133 7-86 (145)
76 d1guta_ b.40.6.1 (A:) Molybdat 31.2 54 0.004 23.4 6.2 49 74-126 7-56 (67)
77 d1guta_ b.40.6.1 (A:) Molybdat 28.7 62 0.0045 23.1 6.2 50 516-569 7-57 (67)
78 d1h9ma1 b.40.6.2 (A:1-73) Cyto 27.8 70 0.0051 23.2 6.4 50 516-569 8-58 (73)
79 d1j6qa_ b.40.9.1 (A:) Heme cha 27.1 1.3E+02 0.0096 23.3 8.5 58 68-131 24-86 (100)
80 d1seta2 d.104.1.1 (A:111-421) 26.3 22 0.0016 34.1 4.0 28 631-658 54-81 (311)
81 d1h9ra1 b.40.6.2 (A:123-199) C 25.5 65 0.0047 23.7 5.9 49 74-126 8-58 (77)
82 d1h9ma1 b.40.6.2 (A:1-73) Cyto 24.9 76 0.0055 23.0 6.2 49 74-126 8-57 (73)
83 d1h9ra1 b.40.6.2 (A:123-199) C 24.8 72 0.0053 23.4 6.1 50 516-569 8-59 (77)
84 d1h9ra2 b.40.6.2 (A:200-261) C 24.1 1.1E+02 0.0082 21.5 6.9 47 74-126 3-50 (62)
85 d1wu7a2 d.104.1.1 (A:3-329) Hi 24.0 18 0.0013 34.6 2.8 48 365-433 271-320 (327)
86 d1fr3a_ b.40.6.1 (A:) Molybdat 23.1 97 0.0071 21.9 6.4 49 74-126 8-56 (67)
87 d1h9ma2 b.40.6.2 (A:74-141) Cy 21.9 1E+02 0.0076 21.8 6.3 50 516-569 7-57 (68)
88 d1h9ma2 b.40.6.2 (A:74-141) Cy 21.5 1E+02 0.0076 21.8 6.3 49 74-126 7-56 (68)
No 1
>d1eova2 d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=5.1e-75 Score=623.13 Aligned_cols=300 Identities=29% Similarity=0.464 Sum_probs=259.5
Q ss_pred ccceEecCCCceeEEeecCCccc---------CchHHHhhhCCcEEEcCCccccccCCCCccceeeccCCcceeeccCHH
Q psy8087 137 NMKVQLIHPSSYAIVWLGDLKQG---------GYPPEVSLANGIAKVTPPTLVQTQVEGGSTLFSLNFFGEPAYLTQSSQ 207 (658)
Q Consensus 137 ~~d~~l~~p~~R~l~lr~~~~~~---------~~iR~fl~~~gF~EV~TPiL~~~~~eG~~~~F~~~~~~~~~~L~~Spq 207 (658)
.+|+|++| ||||||++..++ ++||+||.++||+||+||+|+++++|||+++|.+.+++.++||+||||
T Consensus 23 ~~e~r~~~---R~lDlr~~~~~~ilr~Rs~i~~~iR~ff~~~gflEV~TPiL~~~~~eg~~~~f~~~~~~~~~yL~~Spe 99 (353)
T d1eova2 23 NLDTRLDY---RVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAPSEGGSSVFEVTYFKGKAYLAQSPQ 99 (353)
T ss_dssp CHHHHHHT---HHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCSSSSSCCCEEEETTEEEEECSCTH
T ss_pred CHHHHhhh---hHHhhCCHhHHHHHHHHHHHHHHHHHHHHHCCCEEEECCccCCCCCcchhccccceeeCCcceeccchh
Confidence 37889998 999999875543 699999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcc-cCCcEEEEeeeeecCCCCCccCcceeeeeeeEeecCC-HHHHHHHHHHHHHHHHHHHhhccccccccc---
Q psy8087 208 LYLETCLP-ALGDVYCIAQSYRAENSRTRRHLAEYTHVEAECAFLT-FDDLLDKLEDLICDTVDRVMATHGDLVRQM--- 282 (658)
Q Consensus 208 lylk~li~-g~~rvfeI~~~FR~E~~~~~rHl~EFt~lE~e~a~~d-~~~~m~~~e~li~~i~~~~~~~~~~~~~~~--- 282 (658)
||||+|++ |++||||||||||||++++.||||||||||||++|.| ++++|+++|+|+.+++..+...+...+..+
T Consensus 100 l~lk~ll~~g~~~vf~I~~~FR~E~~~~~rH~pEFtmLE~y~a~~d~~~~i~~~~e~l~~~~~~~~~~~~~~~~~~~~~~ 179 (353)
T d1eova2 100 FNKQQLIVADFERVYEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSELPKRFAHEIELVRKQ 179 (353)
T ss_dssp HHHHHHHHTTCCEEEEEEEEECCCCCCCTTCCSEEEEEEEEEECSSCTHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred hhhhhhhhcccccceeechhhhccccccccccchhcccccccccchhhHHHHHHHHHHHhhhccccchhhhhhhhhhccc
Confidence 99999987 7999999999999999999899999999999999996 899999999999999998876653222111
Q ss_pred -C-CCC-CCCCCCcceeeHHHHHHHHHHcCCCCCCCCCcccCCCCCCch----hhhhhcccCC-cEEEEeCCCCCCCCCC
Q psy8087 283 -N-PNF-EPPARPFLRMNYADAIEYLRKHEIRKPDNTEYEFGEDIPEMP----ERKMTDQINR-PIMLCRFPADIKSFYM 354 (658)
Q Consensus 283 -~-~~~-~~~~~pf~rit~~ea~~~l~~~g~~~~~~~~~~~g~~l~~~~----e~~l~~~~~~-p~fi~~~P~~~~pfy~ 354 (658)
. ..+ .....+|.+++|.||++.+++.+....+ ..++.... ++++++.+.. ++||+|||.+++|||+
T Consensus 180 ~~~~~~~~~~~~~~~ri~~~ea~~~l~~~~~~~~~------~~~~~~~~~~~l~~~i~~~~~~~~~~i~~~P~~~~p~~~ 253 (353)
T d1eova2 180 YPVEEFKLPKDGKMVRLTYKEGIEMLRAAGKEIGD------FEDLSTENEKFLGKLVRDKYDTDFYILDKFPLEIRPFYT 253 (353)
T ss_dssp SCCCCCCCCTTCCCEEEEHHHHHHHHHHTTCCCCT------TCCCCHHHHHHHHHHHHHHSCCSEEEEECCBGGGSCTTB
T ss_pred CccceeeccCCCceeeeehHhhHHHHHHHhhhccc------ccccchhhHHHHHHHHHhhccCCcccccCCcHHHhhhhh
Confidence 1 111 1224589999999999999887654332 22333333 4455555554 5788899999999999
Q ss_pred ccCCCCcCceeEEEEEeCCcceeeeceeccCCHHHHHHHHHHcCCCCCC--CcchHHHhhcCCCCccceecchhHHHHHH
Q psy8087 355 SKCPENPALTESVDVLFPNVGEVIGGSMRIWDPEELLAGYKREGIDPAP--YYWYTDQRKYGSTPHGGYGLGLERVLCWL 432 (658)
Q Consensus 355 ~~~~~~~~~~~~fdL~~~G~~Ei~~G~~r~~d~~~~~~~~~~~g~~~~~--~~~yl~a~~~G~pP~gG~GiGidRL~m~l 432 (658)
+.+++++++++|||||++|+ ||||||+|+||+++|++||+++|++++. ++|||+|++||||||||||||||||+|++
T Consensus 254 ~~~~~~~~~a~rfeL~~~G~-El~nG~~e~~d~~~~~~r~~~~~~~~~~~~~~~yl~al~~G~PP~~G~glGiDRL~m~l 332 (353)
T d1eova2 254 MPDPANPKYSNSYDFFMRGE-EILSGAQRIHDHALLQERMKAHGLSPEDPGLKDYCDGFSYGCPPHAGGGIGLERVVMFY 332 (353)
T ss_dssp CBCSSCTTBBSEEEEEETTE-EEEEEEEBCCCHHHHHHHHHHTTCCTTSTTTHHHHHHHTTCCCCEEEEEEEHHHHHHHH
T ss_pred CCChhhhhhhhceeeeeece-EEcceecccCCHHHHHHHHHHcCCChhhhHHHHHHHHhHcCCCCCceeeeHHHHHHHHH
Confidence 99999999999999999995 9999999999999999999999998764 89999999999999999999999999999
Q ss_pred hcccCcchhhHHHH
Q psy8087 433 LNQYHVRDKYQLIA 446 (658)
Q Consensus 433 ~g~~~Irdvi~f~~ 446 (658)
+|.+||||||+||.
T Consensus 333 ~~~~~Irdvi~FPr 346 (353)
T d1eova2 333 LDLKNIRRASLFPR 346 (353)
T ss_dssp TTCSSGGGGCSSCC
T ss_pred hCCCcHHheeCCCC
Confidence 99999999999984
No 2
>d1e1oa2 d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]}
Probab=100.00 E-value=1.8e-71 Score=593.18 Aligned_cols=296 Identities=20% Similarity=0.345 Sum_probs=245.8
Q ss_pred ceEecCCCceeEEeecC-Cccc---------CchHHHhhhCCcEEEcCCccccccCCCCccce--eeccCCcceeeccCH
Q psy8087 139 KVQLIHPSSYAIVWLGD-LKQG---------GYPPEVSLANGIAKVTPPTLVQTQVEGGSTLF--SLNFFGEPAYLTQSS 206 (658)
Q Consensus 139 d~~l~~p~~R~l~lr~~-~~~~---------~~iR~fl~~~gF~EV~TPiL~~~~~eG~~~~F--~~~~~~~~~~L~~Sp 206 (658)
|+|++| ||||||++ ..++ +++|+||.++||+||+||+|+.+.+||++++| +.++|+.++||+|||
T Consensus 3 ~~Rl~~---R~lDl~r~~~~~~~~r~Rs~i~~~iR~ff~~~gFiEV~TPil~~~~~~~~~~~f~~~~~~~~~~~yL~~Sp 79 (342)
T d1e1oa2 3 EVRYRQ---RYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP 79 (342)
T ss_dssp THHHHT---HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTTTCEECCCCSEESSCCSSCCCCCEEEETTTTEEEEECSCS
T ss_pred Hhhhhc---chhhhcCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCccccCCCCCCcceeecccCCCcccccchhh
Confidence 678888 99999444 3332 69999999999999999999877787778888 568999999999999
Q ss_pred HHHHHHhcc-cCCcEEEEeeeeecCCCCCccCcceeeeeeeEeecCCHHHHHHHHHHHHHHHHHHHhhcccccccccCCC
Q psy8087 207 QLYLETCLP-ALGDVYCIAQSYRAENSRTRRHLAEYTHVEAECAFLTFDDLLDKLEDLICDTVDRVMATHGDLVRQMNPN 285 (658)
Q Consensus 207 qlylk~li~-g~~rvfeI~~~FR~E~~~~~rHl~EFt~lE~e~a~~d~~~~m~~~e~li~~i~~~~~~~~~~~~~~~~~~ 285 (658)
|||||++++ |++|||+||||||||++++ ||+||||||||||+|+|++|+|+++|+|+++++..+.+.+.........+
T Consensus 80 ql~~k~~l~~g~~~vf~i~p~FR~E~~~~-rHl~EFtmlE~e~a~~~~~d~m~~~e~l~~~i~~~~~~~~~~~~~~~~~~ 158 (342)
T d1e1oa2 80 ELYLKRLVVGGFERVFEINRNFRNEGISV-RHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFD 158 (342)
T ss_dssp HHHHHHHHHHTCCEEEEEEEEECCCCCCC--CCSEEEEEEEEEESCCHHHHHHHHHHHHHHHHHHHHSSSEEEETTEEEE
T ss_pred HHHHHHHhhhcccceeeeccccccccccc-cchHHHHHHHHHHHhhhhhhHHHhhhHHHHHHHHHHhCcchhhccchhcc
Confidence 999998887 8999999999999999865 99999999999999999999999999999999999987664333222222
Q ss_pred CCCCCCCcceeeHHHHHHHHHH-------------------cCCCCCCCCCcccCCCCCCchhhhhhcccCCcEEEEeCC
Q psy8087 286 FEPPARPFLRMNYADAIEYLRK-------------------HEIRKPDNTEYEFGEDIPEMPERKMTDQINRPIMLCRFP 346 (658)
Q Consensus 286 ~~~~~~pf~rit~~ea~~~l~~-------------------~g~~~~~~~~~~~g~~l~~~~e~~l~~~~~~p~fi~~~P 346 (658)
...||+++++.++++.+.. .|+..+ ..+.+++.+...++..+++++..|+||+|||
T Consensus 159 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~fi~~~P 233 (342)
T d1e1oa2 159 ---FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVE--KSWGLGRIVTEIFDEVAEAHLIQPTFITEYP 233 (342)
T ss_dssp ---TTSCCEEEEHHHHHHHHSTTCCGGGGGSHHHHHHHHHHTTCCCC--TTCCHHHHHHHHHHHHTGGGCCSCEEEECCB
T ss_pred ---cCCchhhhhHHHHHHHHhccccHhhhhhhHHHHHHHHHcCCCcc--cccchhHHHHHHHHHhhHhhccCCCcCCCCc
Confidence 2479999999999986421 122111 1123334445566777788889999999999
Q ss_pred CCCCCCCCccCCCCcCceeEEEEEeCCcceeeeceeccCCHHHHHHHHHHc------CCCCCC--CcchHHHhhcCCCCc
Q psy8087 347 ADIKSFYMSKCPENPALTESVDVLFPNVGEVIGGSMRIWDPEELLAGYKRE------GIDPAP--YYWYTDQRKYGSTPH 418 (658)
Q Consensus 347 ~~~~pfy~~~~~~~~~~~~~fdL~~~G~~Ei~~G~~r~~d~~~~~~~~~~~------g~~~~~--~~~yl~a~~~G~pP~ 418 (658)
.+++|||+ .+++|+.++++|||+++|+ ||+|||+|+||+++|++||+++ +.++.. ++|||+|++||+|||
T Consensus 234 ~~~~~f~~-~~~~~~~~~~~fdl~~~g~-El~~G~~r~~d~~~~~~r~~~~~~~~~~~~~~~~~~d~~yl~a~~~G~pPh 311 (342)
T d1e1oa2 234 AEVSPLAR-RNDVNPEITDRFEFFIGGR-EIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPT 311 (342)
T ss_dssp GGGCTTBC-BCSSCTTBBSEEEEEETTE-EEEEEEEBCCCHHHHHHHHHHHHHHHHTTCTTCCCCCHHHHHHHHHHCCSE
T ss_pred cccChhhc-cccccchhhhhhhcccCCE-eecCCccccCCHHHHHHHHHHHHHHHhcCcchhhhhhHHHHHHhhCCCCCc
Confidence 99999965 5557888999999999995 9999999999999999999753 333333 489999999999999
Q ss_pred cceecchhHHHHHHhcccCcchhhHHH
Q psy8087 419 GGYGLGLERVLCWLLNQYHVRDKYQLI 445 (658)
Q Consensus 419 gG~GiGidRL~m~l~g~~~Irdvi~f~ 445 (658)
||||||+|||+|+|+|.+||||||+||
T Consensus 312 ~G~glG~dRlvm~l~g~~nIrdvi~FP 338 (342)
T d1e1oa2 312 AGLGIGIDRMIMLFTNSHTIRDVILFP 338 (342)
T ss_dssp EEEEEEHHHHHHHHHTCSSGGGTSSSC
T ss_pred cchhHHHHHHHHHHhCCCcHHHhccCC
Confidence 999999999999999999999999996
No 3
>d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]}
Probab=100.00 E-value=6e-71 Score=587.49 Aligned_cols=299 Identities=29% Similarity=0.520 Sum_probs=263.8
Q ss_pred cceEecCCCceeEEeecCCccc---------CchHHHhhhCCcEEEcCCccccccCCCCccceeeccCCcceeeccCHHH
Q psy8087 138 MKVQLIHPSSYAIVWLGDLKQG---------GYPPEVSLANGIAKVTPPTLVQTQVEGGSTLFSLNFFGEPAYLTQSSQL 208 (658)
Q Consensus 138 ~d~~l~~p~~R~l~lr~~~~~~---------~~iR~fl~~~gF~EV~TPiL~~~~~eG~~~~F~~~~~~~~~~L~~Spql 208 (658)
++++++| ||||||++..++ ++||+||.++||+||+||+|+.+.++|++++|.++++++++||++|||+
T Consensus 14 ~~~r~~~---R~ldlr~~~~~~~l~~Rs~i~~~iR~ff~~~gflEV~TPil~~~~~~~~~~~f~~~~~~~~~yL~~SpE~ 90 (335)
T d1b8aa2 14 LDTRLNN---RFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGTELFPMKYFEEDAFLAESPQL 90 (335)
T ss_dssp HHHHHHT---HHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEESCCCSSSSSCCEEEETTEEEEECSCSHH
T ss_pred HHHHhhc---hhheeCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCccCccCCchhhhhccccccccccccccChHH
Confidence 5678888 999998765333 6999999999999999999998899999999999999999999999999
Q ss_pred HHHHhcc-cCCcEEEEeeeeecCCCCCccCcceeeeeeeEeecC-CHHHHHHHHHHHHHHHHHHHhhcccccccccCCCC
Q psy8087 209 YLETCLP-ALGDVYCIAQSYRAENSRTRRHLAEYTHVEAECAFL-TFDDLLDKLEDLICDTVDRVMATHGDLVRQMNPNF 286 (658)
Q Consensus 209 ylk~li~-g~~rvfeI~~~FR~E~~~~~rHl~EFt~lE~e~a~~-d~~~~m~~~e~li~~i~~~~~~~~~~~~~~~~~~~ 286 (658)
|||++++ |++||||||||||||++++.||++||||+|+|+++. |++++|+++++++..+.+.+.......+..++.++
T Consensus 91 ~lkrll~~g~~~if~i~~~FR~e~~~~~rh~~Ef~~le~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (335)
T d1b8aa2 91 YKEIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDSEMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILNFEL 170 (335)
T ss_dssp HHHHGGGTTCCEEEEEEEEECCCSSCCSSCCSEEEEEEEEEESCSSHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTCCC
T ss_pred HHHHHHhhhhhhHHHhhcccccccccccccchHHHhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcccchhhhhcccc
Confidence 9999988 799999999999999998889999999999999885 89999999999999999988776544444455444
Q ss_pred CCCCCCcceeeHHHHHHHHHHcCCCCCCCCCcccCCCCCCch----hhhhhcccC-CcEEEEeCCCCCCCCCCccCCCCc
Q psy8087 287 EPPARPFLRMNYADAIEYLRKHEIRKPDNTEYEFGEDIPEMP----ERKMTDQIN-RPIMLCRFPADIKSFYMSKCPENP 361 (658)
Q Consensus 287 ~~~~~pf~rit~~ea~~~l~~~g~~~~~~~~~~~g~~l~~~~----e~~l~~~~~-~p~fi~~~P~~~~pfy~~~~~~~~ 361 (658)
.....||++++|.+|++.+++.|.+.+ ++++++... +.++.+... .|+||+|||.+++|||++.+++++
T Consensus 171 ~~~~~~~~r~~~~e~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~P~~~~pl~~~~~~~~~ 244 (335)
T d1b8aa2 171 EEPKLPFPRVSYDKALEILGDLGKEIP------WGEDIDTEGERLLGKYMMENENAPLYFLYQYPSEAKPFYIMKYDNKP 244 (335)
T ss_dssp CCCCSSCCEEEHHHHHHHHHHTTCCCC------TTSCCCHHHHHHHHHHHHHHHCCSEEEEESCBGGGSCTTBCEETTEE
T ss_pred ccCCCCcccccHHHHHHHHHhhccccC------cccccccccccceeeeeecccccccceeecChHHhhhccccccCCCc
Confidence 445679999999999999988876643 345555444 344444444 458999999999999888777888
Q ss_pred CceeEEEEEeCCcceeeeceeccCCHHHHHHHHHHcCCCCCCCcchHHHhhcCCCCccceecchhHHHHHHhcccCcchh
Q psy8087 362 ALTESVDVLFPNVGEVIGGSMRIWDPEELLAGYKREGIDPAPYYWYTDQRKYGSTPHGGYGLGLERVLCWLLNQYHVRDK 441 (658)
Q Consensus 362 ~~~~~fdL~~~G~~Ei~~G~~r~~d~~~~~~~~~~~g~~~~~~~~yl~a~~~G~pP~gG~GiGidRL~m~l~g~~~Irdv 441 (658)
.++++||||++|+ ||+|||+|+||+++|+++|+++|++++.|+|||+|++||||||||||||||||+|++||.+|||||
T Consensus 245 ~~a~rfel~~~G~-El~nG~~e~~~~~~~~~r~~~~~~~~e~~e~yl~al~~G~Pp~~G~glGiDRLvm~l~~~~~IrdV 323 (335)
T d1b8aa2 245 EICRAFDLEYRGV-EISSGGQREHRHDILVEQIKEKGLNPESFEFYLKAFRYGMPPHGGFGLGAERLIKQMLDLPNIREV 323 (335)
T ss_dssp EEESEEEEEETTE-EEEEEEEBCCCHHHHHHHHHHTTCCGGGGHHHHHTTSBCCCCEEEEEEEHHHHHHHHTTCSCGGGG
T ss_pred HHHHhhccccCce-eeecccchhcCHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCCCceeeeHHHHHHHHHhCCCcHHhe
Confidence 9999999999997 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHH
Q psy8087 442 YQLIA 446 (658)
Q Consensus 442 i~f~~ 446 (658)
|+||.
T Consensus 324 i~FPr 328 (335)
T d1b8aa2 324 ILFPR 328 (335)
T ss_dssp SSSCC
T ss_pred EcCCC
Confidence 99973
No 4
>d1n9wa2 d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]}
Probab=100.00 E-value=4e-70 Score=573.62 Aligned_cols=289 Identities=30% Similarity=0.510 Sum_probs=213.1
Q ss_pred ceeEEeecCCccc---------CchHHHhhhCCcEEEcCCccccccCCCCccceeeccCCcceeeccCHHHHHHHhcccC
Q psy8087 147 SYAIVWLGDLKQG---------GYPPEVSLANGIAKVTPPTLVQTQVEGGSTLFSLNFFGEPAYLTQSSQLYLETCLPAL 217 (658)
Q Consensus 147 ~R~l~lr~~~~~~---------~~iR~fl~~~gF~EV~TPiL~~~~~eG~~~~F~~~~~~~~~~L~~Spqlylk~li~g~ 217 (658)
+||||||++..+. ++||+||.++||+||+||+|++++++|++++|+++++|+++||++|||+|||+++.|+
T Consensus 1 yR~ldlr~~~~~~~l~~Rs~i~~~iR~ff~~~gf~Ev~TP~l~~~~~e~~~~~f~~~~~~~~~~L~~Spel~k~ll~~g~ 80 (304)
T d1n9wa2 1 YRYVTLRGEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGLFGVDYFEKRAYLAQSPQLYKQIMVGVF 80 (304)
T ss_dssp CHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCC----------------------------CHHHHHHHHHHH
T ss_pred CCeEEecCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCccCCCCCCCCCceECCcccccchhccccHHHHHHHhhccc
Confidence 4899998665433 6999999999999999999999999999999999999999999999999988776699
Q ss_pred CcEEEEeeeeecCCCCCccCcceeeeeeeEeecC-CHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCCCCCCCccee
Q psy8087 218 GDVYCIAQSYRAENSRTRRHLAEYTHVEAECAFL-TFDDLLDKLEDLICDTVDRVMATHGDLVRQMNPNFEPPARPFLRM 296 (658)
Q Consensus 218 ~rvfeI~~~FR~E~~~~~rHl~EFt~lE~e~a~~-d~~~~m~~~e~li~~i~~~~~~~~~~~~~~~~~~~~~~~~pf~ri 296 (658)
+|||+||||||||++.++||+|||||||||++|. +++++|+++|+++++++..+.+.+...+..++.++.....+|+++
T Consensus 81 ~~if~i~~~FR~ee~~~~rh~~EF~~le~~~~~~~~~~~~~~l~E~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (304)
T d1n9wa2 81 ERVYEVAPVWRMEEHHTSRHLNEYLSLDVEMGFIADEEDLMRLEEALLAEMLEEALNTAGDEIRLLGATWPSFPQDIPRL 160 (304)
T ss_dssp SEEEEEEEC-------------CCEEEEEEEESCSSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTCCCCCCSSSCCEE
T ss_pred ccceeehhhcccccccccccccHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceecccchhhhh
Confidence 9999999999999988889999999999999997 789999999999999999988776554444554444456789999
Q ss_pred eHHHHHHHHHHcCCCCCCCCCcccCCCCCCchhhhhhcc-----cCCcEEEEeCCCCCCCCCCccCCCCcCceeEEEEEe
Q psy8087 297 NYADAIEYLRKHEIRKPDNTEYEFGEDIPEMPERKMTDQ-----INRPIMLCRFPADIKSFYMSKCPENPALTESVDVLF 371 (658)
Q Consensus 297 t~~ea~~~l~~~g~~~~~~~~~~~g~~l~~~~e~~l~~~-----~~~p~fi~~~P~~~~pfy~~~~~~~~~~~~~fdL~~ 371 (658)
++.||+++++.. .. ..++.++....++.+.+. ...|+||+|||.+++|||+++ .++++++|||||+
T Consensus 161 ~~~e~~~~l~~~-~~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~fi~~~P~~~~p~~~~~--~~~~~a~rfel~~ 231 (304)
T d1n9wa2 161 THAEAKRILKEE-LG------YPVGQDLSEEAERLLGEYAKERWGSDWLFVTRYPRSVRPFYTYP--EEDGTTRSFDLLF 231 (304)
T ss_dssp EHHHHHHHHHHT-SC------CCCCSSCCHHHHHHHHHHHHHHTCCSEEEEECCBGGGSCTTBCB--CTTSBBSEEEEEE
T ss_pred hHHHHHHHHHHH-hC------CCcCCCccHHHHHHHHHHHHhhcCCceEEEeCChhhhCchhhcc--cccceeehhcccc
Confidence 999999987653 22 234556666666554433 357999999999999997544 4556899999999
Q ss_pred CCcceeeeceeccCCHHHHHHHHHHcCCCCCCCcchHHHhhcCCCCccceecchhHHHHHHhcccCcchhhHHH
Q psy8087 372 PNVGEVIGGSMRIWDPEELLAGYKREGIDPAPYYWYTDQRKYGSTPHGGYGLGLERVLCWLLNQYHVRDKYQLI 445 (658)
Q Consensus 372 ~G~~Ei~~G~~r~~d~~~~~~~~~~~g~~~~~~~~yl~a~~~G~pP~gG~GiGidRL~m~l~g~~~Irdvi~f~ 445 (658)
+|+ ||+|||+|+||+++|++||+++|++++.++|||+|++||+|||||||||+|||+|+++|.+|||||++||
T Consensus 232 ~G~-El~nG~~e~~d~~~l~~r~~~~~~~~e~~~~yl~al~~G~PP~~G~glGiDRL~m~l~g~~~Irdv~~FP 304 (304)
T d1n9wa2 232 RGL-EITSGGQRIHRYEELLESLKAKGMDPEAFHGYLEVFKYGMPPHGGFAIGAERLTQKLLGLPNVRYARAFP 304 (304)
T ss_dssp TTE-EEEEEEEBCCCHHHHHHHHHHTTCCGGGGHHHHGGGGBCCCSEEEEEEEHHHHHHHHTTCSSGGGGCSCC
T ss_pred CcE-EEeccccccCCHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCceeehHHHHHHHHHhCCCcHHheecCC
Confidence 997 9999999999999999999999999999999999999999999999999999999999999999999997
No 5
>d1c0aa3 d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=3.3e-68 Score=568.04 Aligned_cols=288 Identities=21% Similarity=0.282 Sum_probs=240.4
Q ss_pred cceEecCCCceeEEeecCCccc---------CchHHHhhhCCcEEEcCCccccccCCCCcccee--eccCCcceeeccCH
Q psy8087 138 MKVQLIHPSSYAIVWLGDLKQG---------GYPPEVSLANGIAKVTPPTLVQTQVEGGSTLFS--LNFFGEPAYLTQSS 206 (658)
Q Consensus 138 ~d~~l~~p~~R~l~lr~~~~~~---------~~iR~fl~~~gF~EV~TPiL~~~~~eG~~~~F~--~~~~~~~~~L~~Sp 206 (658)
.|+|++| ||||||++..++ ++||+||.++||+||+||+|++++++|++..|. ..++|..+||+|||
T Consensus 12 ~e~Rl~~---R~LdLr~~~~~~ilr~Rs~i~~~iR~ff~~~gFlEV~TPiL~~~~~~g~~~~~~~~~~~~~~~~~L~~Sp 88 (346)
T d1c0aa3 12 EEARLKY---RYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSP 88 (346)
T ss_dssp HHHHHHT---HHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSSSCCCEEECSSSTTCEEECCSCS
T ss_pred HHHHhhc---hHHhhCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCccCCCCCccccccccccccCCCccccCCcCH
Confidence 5788888 999999876544 699999999999999999999999988887663 35678999999999
Q ss_pred HHHHHHhcc-cCCcEEEEeeeeecCCCCCccCcceeeeeeeEeecCCHHHHHHHHHHHHHHHHHHHhhcccccccccCCC
Q psy8087 207 QLYLETCLP-ALGDVYCIAQSYRAENSRTRRHLAEYTHVEAECAFLTFDDLLDKLEDLICDTVDRVMATHGDLVRQMNPN 285 (658)
Q Consensus 207 qlylk~li~-g~~rvfeI~~~FR~E~~~~~rHl~EFt~lE~e~a~~d~~~~m~~~e~li~~i~~~~~~~~~~~~~~~~~~ 285 (658)
|||||+|++ |++||||||||||||++++ +|+||||||||||+|+|++++|+++|+|+++++..+.+. +
T Consensus 89 el~lk~ll~~g~~~Vf~i~~~FR~E~~~~-~H~~EFtmLE~e~a~~~~~~~m~~~E~li~~l~~~~~~~----------~ 157 (346)
T d1c0aa3 89 QLFKQLLMMSGFDRYYQIVKCFRDEDLRA-DRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGV----------D 157 (346)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEECCCCCBT-TBCSEEEEEEEEEESCCHHHHHHHHHHHHHHHHHHHHSC----------C
T ss_pred HHHHHHHhhcCCCceEEEeeeccccccCc-hhhhHhhhhccccccccHhHhHHHHHHHHHHHHHHHhCC----------c
Confidence 999999887 7999999999999999977 777999999999999999999999999999999988642 2
Q ss_pred CCCCCCCcceeeHHHHHHHHHHcCCCCCCCCC-----cccCCCCCCchhhhhhcccCCcEEEEeCCCCCCCCCCccCCCC
Q psy8087 286 FEPPARPFLRMNYADAIEYLRKHEIRKPDNTE-----YEFGEDIPEMPERKMTDQINRPIMLCRFPADIKSFYMSKCPEN 360 (658)
Q Consensus 286 ~~~~~~pf~rit~~ea~~~l~~~g~~~~~~~~-----~~~g~~l~~~~e~~l~~~~~~p~fi~~~P~~~~pfy~~~~~~~ 360 (658)
..+|++++|.|++..+ +.+.++... ..|+.++ ..++...+..+..+++++++|...+|+++.. ..+
T Consensus 158 ----~~~~~~~~~~e~~~~~---~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~-~~~ 228 (346)
T d1c0aa3 158 ----LGDFPVMTFAEAERRY---GSDKPDLRDESKWAPLWVIDF-PMFEDDGEGGLTAMHHPFTSPKDMTAAELKA-APE 228 (346)
T ss_dssp ----CCSCCEEEHHHHHHHH---SCSSCCTTCSSCCCEEEEECC-BSEEECSSSCEEESSCTTBCBSSCCHHHHHH-SCT
T ss_pred ----CCccceeeHHHHHHHh---cccccchhhHhhhhhhccccc-cccchhcccceeeeEeeccccchhhHHHhcc-CCc
Confidence 2589999999998764 444433211 1111121 1122223333445677788999999986544 456
Q ss_pred cCceeEEEEEeCCcceeeeceeccCCHHHHHHHHHHcCCCC----CCCcchHHHhhcCCCCccceecchhHHHHHHhccc
Q psy8087 361 PALTESVDVLFPNVGEVIGGSMRIWDPEELLAGYKREGIDP----APYYWYTDQRKYGSTPHGGYGLGLERVLCWLLNQY 436 (658)
Q Consensus 361 ~~~~~~fdL~~~G~~Ei~~G~~r~~d~~~~~~~~~~~g~~~----~~~~~yl~a~~~G~pP~gG~GiGidRL~m~l~g~~ 436 (658)
+.++++|||+++|+ ||+|||+|+||+++|++||+++|+++ +.|+|||+|++||||||||||||+|||+|++||.+
T Consensus 229 ~~~a~~fdl~~~G~-El~nG~~rl~d~~~~~~r~~~~~~~~~~~~e~~~~ylda~~~G~PP~~G~glGldRL~m~l~g~~ 307 (346)
T d1c0aa3 229 NAVANAYDMVINGY-EVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 307 (346)
T ss_dssp TCBBSEEEEEETTE-EEEEEEEBCCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTTTCCCEEEEEEEHHHHHHHHHTCS
T ss_pred cccccccccCcCCE-EEechhhhhchHHHHHHHHHHhCccccchHHHHHHHHHHHHCCCCCceeEeEHHHHHHHHHcCCC
Confidence 78999999999996 99999999999999999999999876 45889999999999999999999999999999999
Q ss_pred CcchhhHHHHHhh
Q psy8087 437 HVRDKYQLIAKAQ 449 (658)
Q Consensus 437 ~Irdvi~f~~k~~ 449 (658)
|||||++||..++
T Consensus 308 ~Irdvi~FPRt~~ 320 (346)
T d1c0aa3 308 NIRDVIAFPKTTA 320 (346)
T ss_dssp CGGGGSSSCCCTT
T ss_pred cHHheecCCCCCC
Confidence 9999999997654
No 6
>d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]}
Probab=100.00 E-value=1.9e-67 Score=563.98 Aligned_cols=288 Identities=23% Similarity=0.342 Sum_probs=240.7
Q ss_pred cceEecCCCceeEEeecCCccc---------CchHHHhhhCCcEEEcCCccccccCCCCccce--eeccCCcceeeccCH
Q psy8087 138 MKVQLIHPSSYAIVWLGDLKQG---------GYPPEVSLANGIAKVTPPTLVQTQVEGGSTLF--SLNFFGEPAYLTQSS 206 (658)
Q Consensus 138 ~d~~l~~p~~R~l~lr~~~~~~---------~~iR~fl~~~gF~EV~TPiL~~~~~eG~~~~F--~~~~~~~~~~L~~Sp 206 (658)
.|+|++| ||||||++..++ ++||+||.++||+||+||+|++++++|++..| ..++++..+||++||
T Consensus 20 ~~~Rl~~---R~LdLR~~~~~~ilr~Rs~i~~~iR~ff~~~gfiEV~TP~L~~~~~eg~~~~~~~~~~~~~~~~yL~~Sp 96 (356)
T d1l0wa3 20 EELRLKY---RYLDLRRRRMQENLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEGARDFLVPYRHEPGLFYALPQSP 96 (356)
T ss_dssp HHHHHHT---HHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSSSCCCEEECTTSTTEEEECCSCS
T ss_pred HHHHhhc---hhhhhCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCccccCCCcccccchhhhhcccccccCCCcCh
Confidence 5789999 999999886654 69999999999999999999999999988876 347899999999999
Q ss_pred HHHHHHhcc-cCCcEEEEeeeeecCCCCCccCcceeeeeeeEeecCCHHHHHHHHHHHHHHHHHHHhhcccccccccCCC
Q psy8087 207 QLYLETCLP-ALGDVYCIAQSYRAENSRTRRHLAEYTHVEAECAFLTFDDLLDKLEDLICDTVDRVMATHGDLVRQMNPN 285 (658)
Q Consensus 207 qlylk~li~-g~~rvfeI~~~FR~E~~~~~rHl~EFt~lE~e~a~~d~~~~m~~~e~li~~i~~~~~~~~~~~~~~~~~~ 285 (658)
|||||++++ |++|||+||||||||++++ +|+|||||||||++|+|++++|+++|+|++++++.+.+..
T Consensus 97 el~lk~ll~~g~~~Vf~i~~~FRaE~~~t-~H~~EFtmLE~e~~~~~~~~~m~~~E~li~~v~~~~~~~~---------- 165 (356)
T d1l0wa3 97 QLFKQMLMVAGLDRYFQIARCFRDEDLRA-DRQPDFTQLDLEMSFVEVEDVLELNERLMAHVFREALGVE---------- 165 (356)
T ss_dssp HHHHHHHHHTTCSEEEEEEEEECCCCCCS-SCCSEEEEEEEEEESCCHHHHHHHHHHHHHHHHHHHTCCC----------
T ss_pred hHHHHHhhhcccCcEEEEeccccccccCC-cchhhhhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhCCC----------
Confidence 999999887 7999999999999999987 8999999999999999999999999999999998876432
Q ss_pred CCCCCCCcceeeHHHHHHHHHHcCCCCCCC----CCcccCCCCCC--chhhhhhcccCCcEEEEeCCCCCCCCCCccCCC
Q psy8087 286 FEPPARPFLRMNYADAIEYLRKHEIRKPDN----TEYEFGEDIPE--MPERKMTDQINRPIMLCRFPADIKSFYMSKCPE 359 (658)
Q Consensus 286 ~~~~~~pf~rit~~ea~~~l~~~g~~~~~~----~~~~~g~~l~~--~~e~~l~~~~~~p~fi~~~P~~~~pfy~~~~~~ 359 (658)
.+.||++++|.+|+..+ +.+.++. ....|+.++.. ..+......+..|+|+++||....++ .+ +.
T Consensus 166 ---~~~~f~r~~~~~a~~~~---~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~f~~~~p~~~~~~-~~--~~ 236 (356)
T d1l0wa3 166 ---LPLPFPRLSYEEAMERY---GSDKPDLRREGFRFLWVVDFPLLEWDEEEEAWTYMHHPFTSPHPEDLPLL-EK--DP 236 (356)
T ss_dssp ---CCSSCCEEEHHHHHHHH---SSSSCCCSCCSCCEEEEECCBSBCCCTTTSCCCBSSCTTBCBCSTTTTHH-HH--CG
T ss_pred ---CCCCCCcchHHhhHHHH---hcCcHhHHHHhhhhhhccccccccccchhcceeeeeCCcccCChhhhchh-hc--CC
Confidence 24699999999999875 3332221 12233333321 11111111245688999999887654 22 24
Q ss_pred CcCceeEEEEEeCCcceeeeceeccCCHHHHHHHHHHcCCCCCC----CcchHHHhhcCCCCccceecchhHHHHHHhcc
Q psy8087 360 NPALTESVDVLFPNVGEVIGGSMRIWDPEELLAGYKREGIDPAP----YYWYTDQRKYGSTPHGGYGLGLERVLCWLLNQ 435 (658)
Q Consensus 360 ~~~~~~~fdL~~~G~~Ei~~G~~r~~d~~~~~~~~~~~g~~~~~----~~~yl~a~~~G~pP~gG~GiGidRL~m~l~g~ 435 (658)
++.++++||||++|+ ||||||+|+||+++|++||+++|++++. |+|||+|++||||||||||||+|||+|+++|.
T Consensus 237 ~~~~a~~FdL~~~G~-ElanG~~r~~d~~~~~~r~~~~~~~~~~~~~~~~~yl~a~~~G~PP~~G~glGldRLlm~l~g~ 315 (356)
T d1l0wa3 237 GRVRALAYDLVLNGV-EVGGGSIRIHDPRLQARVFRLLGIGEEEQREKFGFFLEALEYGAPPHGGIAWGLDRLLALMTGS 315 (356)
T ss_dssp GGCBBSEEEEEETTE-EEEEEEEBCCCHHHHHHHHHHHTCCTTTHHHHTHHHHHHTTBTCCCEEEEEEEHHHHHHHHHTC
T ss_pred CcceeeeeecccCCE-EeeccEEEeCcHHHHHHHHHHHcCCchhhHHHHHHHHHHhhCCCCCcceEEEcHHHHHHHHcCC
Confidence 567899999999997 9999999999999999999999987753 89999999999999999999999999999999
Q ss_pred cCcchhhHHHHHhh
Q psy8087 436 YHVRDKYQLIAKAQ 449 (658)
Q Consensus 436 ~~Irdvi~f~~k~~ 449 (658)
+|||||++||..+.
T Consensus 316 ~~Irdvi~FPR~~~ 329 (356)
T d1l0wa3 316 PSIREVIAFPKNKE 329 (356)
T ss_dssp SSGGGGSSSCCCTT
T ss_pred CcHHheecCCCCCC
Confidence 99999999986543
No 7
>d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00 E-value=4.1e-66 Score=538.55 Aligned_cols=267 Identities=18% Similarity=0.347 Sum_probs=225.0
Q ss_pred EEeecCCccc---------CchHHHhhhCCcEEEcCCcccccc----CCC---CccceeeccCCcceeeccCHHHHHHHh
Q psy8087 150 IVWLGDLKQG---------GYPPEVSLANGIAKVTPPTLVQTQ----VEG---GSTLFSLNFFGEPAYLTQSSQLYLETC 213 (658)
Q Consensus 150 l~lr~~~~~~---------~~iR~fl~~~gF~EV~TPiL~~~~----~eG---~~~~F~~~~~~~~~~L~~Spqlylk~l 213 (658)
||||++..++ +++|+||.++||+||+||+|++.+ +++ +..+|+++|||+++||++|||||||++
T Consensus 3 l~l~~~~~~~il~~Rs~i~~~iR~ff~~~gf~EV~tPil~~~~~~~~~~~~~~~~~~~~~~~~~~~~yL~~SPel~lk~l 82 (293)
T d1nnha_ 3 VEIISREISPTLDIQTKILEYMTDFFVKEGFKWLLPVIISPITDPLWPDPAGEGMEPAEVEIYGVKMRLTHSMILHKQLA 82 (293)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHTTCEEECCCCEESCCCCCCSCTTCCCCCCCEEEETTEEEEECSCSHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCcccccCCCCCCccccCccccccccCCCceeecccChhhhHHHH
Confidence 4566555443 699999999999999999996432 222 245788999999999999999999988
Q ss_pred cc-cCCcEEEEeeeeecCCC--CCccCcceeeeeeeEeecCCHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCCCCC
Q psy8087 214 LP-ALGDVYCIAQSYRAENS--RTRRHLAEYTHVEAECAFLTFDDLLDKLEDLICDTVDRVMATHGDLVRQMNPNFEPPA 290 (658)
Q Consensus 214 i~-g~~rvfeI~~~FR~E~~--~~~rHl~EFt~lE~e~a~~d~~~~m~~~e~li~~i~~~~~~~~~~~~~~~~~~~~~~~ 290 (658)
++ |++||||||||||||+. +++||||||||||||++|+|++|+|+++|+|++++++.+.+... .++. ..
T Consensus 83 la~g~~~Vf~I~~~FR~E~~~s~t~RH~~EFtmLE~e~~~~d~~d~m~~~e~li~~~~~~~~~~~~-------~~~~-~~ 154 (293)
T d1nnha_ 83 IAMGLKKIFVLSPNIRLESRQKDDGRHAYEFTQLDFEVERAKMEDIMRLIERLVYGLFRKAEEWTG-------REFP-KT 154 (293)
T ss_dssp HHTTCCEEEEEEEEECCCCGGGCSSSCCSEEEEEEEEEETCCHHHHHHHHHHHHHHHHHHHHHHHS-------SCCC-CC
T ss_pred HHhccccceeechhhhcCcccCCCCccchhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhC-------cccc-cC
Confidence 77 89999999999999965 45689999999999999999999999999999999998865432 1221 24
Q ss_pred CCcceeeHHHHHHHHHHcCCCCCCCCCcccCCCCCCchhhhhhcccCCcEEEEeCCCCCCCCCCccCCCCcCceeEEEEE
Q psy8087 291 RPFLRMNYADAIEYLRKHEIRKPDNTEYEFGEDIPEMPERKMTDQINRPIMLCRFPADIKSFYMSKCPENPALTESVDVL 370 (658)
Q Consensus 291 ~pf~rit~~ea~~~l~~~g~~~~~~~~~~~g~~l~~~~e~~l~~~~~~p~fi~~~P~~~~pfy~~~~~~~~~~~~~fdL~ 370 (658)
.||++++|.||++. .|.+ ...++.+..|+|++|||. +||++.. ++...+.+|+++
T Consensus 155 ~~~~~~~~~eal~~---~g~d------------------~~~~~~~~~p~~~~~~p~---~f~~~~~-~~~~~~~~~~l~ 209 (293)
T d1nnha_ 155 KRFEVFEYSEVLEE---FGSD------------------EKASQEMEEPFWIINIPR---EFYDREV-DGFWRNYDLILP 209 (293)
T ss_dssp SSCEEEEHHHHHHH---TSSH------------------HHHHHHCSSCEEEECCCC---CTTBCEE-TTEECEEEEEET
T ss_pred CccccccHHhhhcc---cCcc------------------cccccccccceeccccch---hhccccc-ccccccceeEec
Confidence 68999999999975 4432 223345678999999994 6887654 345567888888
Q ss_pred eCCcceeeeceeccCCHHHHHHHHHHcCCCCCCCcchHHHhhcC-CCCccceecchhHHHHHHhcccCcchhhHHHHHhh
Q psy8087 371 FPNVGEVIGGSMRIWDPEELLAGYKREGIDPAPYYWYTDQRKYG-STPHGGYGLGLERVLCWLLNQYHVRDKYQLIAKAQ 449 (658)
Q Consensus 371 ~~G~~Ei~~G~~r~~d~~~~~~~~~~~g~~~~~~~~yl~a~~~G-~pP~gG~GiGidRL~m~l~g~~~Irdvi~f~~k~~ 449 (658)
++|. ||+|||+|+|||++|++||++.|++++.++|||+|++|| ||||||||||+|||+|+++|.+|||||++||..+.
T Consensus 210 ~~g~-Elang~~el~d~~~~~~r~~~~gl~~e~~~~yl~a~~~G~mPP~~G~glGiDRL~m~l~g~~~Irdv~~FPR~~g 288 (293)
T d1nnha_ 210 YGYG-EVASGGEREWEYEKIVAKIRKAGLNEDSFRPYLEIAKAGKLKPSAGAGIGVERLVRFIVGAKHIAEVQPFPRIPG 288 (293)
T ss_dssp TTTE-EEEEEEEBCCCHHHHHHHHHHTTCCGGGGHHHHHHHHTTCCCCEEEEEEEHHHHHHHHHTCSSGGGGCSSCCCTT
T ss_pred ccCc-ccccccccccCHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCCCeEeehHHHHHHHHhCCCcHHheecCCCCCC
Confidence 8995 999999999999999999999999999999999999999 99999999999999999999999999999987654
Q ss_pred h
Q psy8087 450 L 450 (658)
Q Consensus 450 l 450 (658)
+
T Consensus 289 ~ 289 (293)
T d1nnha_ 289 I 289 (293)
T ss_dssp S
T ss_pred C
Confidence 3
No 8
>d1l0wa1 b.40.4.1 (A:1-104) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]}
Probab=99.77 E-value=2.7e-18 Score=149.32 Aligned_cols=90 Identities=32% Similarity=0.442 Sum_probs=81.9
Q ss_pred CccCCcEEEEEEEEEeeecCCCceEEEEEEeCCEEEEEEEcCCccchHHhccCCCCcEEEEEEEEEecCCC--CCCCCce
Q psy8087 508 EKYRDKRVTIFGWVHRLRRQGKGLMFVTLRDGSGFIQCVLADILCQTEHALLLSTESSVQFRGRIEKVPEG--KSAPGGH 585 (658)
Q Consensus 508 ~~~~g~~V~v~GwI~~~R~~Gkkl~Fi~Lrd~~~~iQvv~~~~~~~~~~~~~L~~gs~V~V~G~v~~~~~~--~~~~g~~ 585 (658)
..+.|++|+|+|||+++|.+| +++|++|||++|.+||+++.+...++.+..|+.||+|.|+|+|.++++. +.++|++
T Consensus 12 ~~~~g~~V~l~GWV~~~R~~g-~i~Fi~LRD~~G~iQ~v~~~~~~~~~~~~~l~~Es~I~V~G~V~~r~~~n~~~~tG~i 90 (104)
T d1l0wa1 12 ETHVGEEVVLEGWVNRRRDLG-GLIFLDLRDREGLVQLVAHPASPAYATAERVRPEWVVRAKGLVRLRPEPNPRLATGRV 90 (104)
T ss_dssp GGGTTCEEEEEEEEEEEEECS-SCEEEEEEETTEEEEEEECTTSTTHHHHTTCCTTCEEEEEEEEEECSSCCTTSTTTTE
T ss_pred hHHCCCEEEEEEEEEehhcCC-CeEEEEEECCCCceEEecccchhHHHHHhhcCcccEEEEEEEEeeCCccCCCCCCCCE
Confidence 567899999999999999998 7999999999999999998876667788899999999999999988753 4568999
Q ss_pred EEEEEEEEEEecC
Q psy8087 586 ELKVDYWEVVGLA 598 (658)
Q Consensus 586 El~~~~i~vls~~ 598 (658)
||.+++++|||+|
T Consensus 91 Ei~v~~i~iL~~a 103 (104)
T d1l0wa1 91 EVELSALEVLAEA 103 (104)
T ss_dssp EEEEEEEEEEECC
T ss_pred EEEEeEEEEEEcC
Confidence 9999999999987
No 9
>d1e1oa1 b.40.4.1 (A:11-153) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]}
Probab=99.76 E-value=2.6e-18 Score=158.01 Aligned_cols=124 Identities=17% Similarity=0.103 Sum_probs=96.7
Q ss_pred hhhHHHHHHHHhHHHHHhcccCCCCCCCcc---------ceeecccC-CccCCcEEEEEEEEEeeecCCCceEEEEEEeC
Q psy8087 470 KEEEDAEKREKNLEEAKKIVLKEDPSLPPA---------VRIKIKDG-EKYRDKRVTIFGWVHRLRRQGKGLMFVTLRDG 539 (658)
Q Consensus 470 k~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---------~~~~i~~~-~~~~g~~V~v~GwI~~~R~~Gkkl~Fi~Lrd~ 539 (658)
..+++.+.|.++++++++.++ ++|..... .|...... ....+..|+|+|||.++|.+| |++|++|+|.
T Consensus 3 ~~~e~~~~R~~Kl~~Lr~~G~-pYP~~~~~t~~~~ei~~~~~~~~~~~~~~~~~~V~vaGRI~~~R~~G-k~~F~~i~D~ 80 (143)
T d1e1oa1 3 DFNDELRNRREKLAALRQQGV-AFPNDFRRDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMG-KASFVTLQDV 80 (143)
T ss_dssp HHHHHHHHHHHHHHHHHHHSC-SSCCCCCCSCCHHHHHHHHTTCCHHHHHHHCCEEEEEEEEEEEEEET-TEEEEEEEET
T ss_pred CccHHHHHHHHHHHHHHHhCC-CCCCCCcCCccHHHHHHHHhcccchhhhccCceEEEEEEEEEEcccC-CeeEEEEEeC
Confidence 345677888899999999887 77642221 11111110 112367899999999999999 7999999999
Q ss_pred CEEEEEEEcCCc---cch-HHhccCCCCcEEEEEEEEEecCCCCCCCCceEEEEEEEEEEecCCC
Q psy8087 540 SGFIQCVLADIL---CQT-EHALLLSTESSVQFRGRIEKVPEGKSAPGGHELKVDYWEVVGLAPA 600 (658)
Q Consensus 540 ~~~iQvv~~~~~---~~~-~~~~~L~~gs~V~V~G~v~~~~~~~~~~g~~El~~~~i~vls~~~~ 600 (658)
+|.||++++++. ..+ .+.+.|++||+|+|+|.+.+|+ +||++|.+++|++|++|+.
T Consensus 81 ~g~iQi~~~~~~~~~~~~~~~~k~ld~GDiIgv~G~~~~Tk-----tGElsi~~~~~~lLsK~l~ 140 (143)
T d1e1oa1 81 GGRIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLFKTQ-----TGELSIHCTELRLLTKALR 140 (143)
T ss_dssp TEEEEEEEETTTSSTTHHHHTGGGCCTTCEEEEEEEEEECT-----TCCEEEEEEEEEEEECCSS
T ss_pred CceEEEEEccccchhhhHHHHHhcCCcccEEEeecccEECC-----CCcEEEEeeEEEEeccccC
Confidence 999999998753 234 3457899999999999998766 8999999999999999975
No 10
>d1n9wa1 b.40.4.1 (A:1-93) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]}
Probab=99.76 E-value=5.1e-18 Score=144.98 Aligned_cols=88 Identities=31% Similarity=0.480 Sum_probs=78.5
Q ss_pred eecccCCccCCcEEEEEEEEEeeecCCCceEEEEEEeCCEEEEEEEcCCccchHHhccCCCCcEEEEEEEEEecCCCCCC
Q psy8087 502 IKIKDGEKYRDKRVTIFGWVHRLRRQGKGLMFVTLRDGSGFIQCVLADILCQTEHALLLSTESSVQFRGRIEKVPEGKSA 581 (658)
Q Consensus 502 ~~i~~~~~~~g~~V~v~GwI~~~R~~Gkkl~Fi~Lrd~~~~iQvv~~~~~~~~~~~~~L~~gs~V~V~G~v~~~~~~~~~ 581 (658)
+.|+++..+.|++|+|+|||+++|.+| |++|++|||++|.+||++++. ..++.||+|.|+|++..++ .+
T Consensus 3 ~~I~dl~~~~g~~V~v~GwV~~~R~~g-k~~Fi~LrD~sg~iQ~v~~~~-------~~~~~e~~v~v~G~v~~~~---~~ 71 (93)
T d1n9wa1 3 VLVRDLKAHVGQEVELLGFLHWRRDLG-RIQFLLLRDRSGVVQVVTGGL-------KLPLPESALRVRGLVVENA---KA 71 (93)
T ss_dssp CCGGGGGGCTTSEEEEEEEEEEEEECS-SEEEEEEEETTEEEEEEEESC-------CCCCTTCEEEEEEEEEECT---TS
T ss_pred EEhHHhhhcCCCEEEEEEEEEeEEeCC-CcEEEEEEcCCccceEEeccc-------cccccceEEEEEEEEEECC---CC
Confidence 457777788999999999999999998 799999999999999999864 2578999999999999876 45
Q ss_pred CCceEEEEEEEEEEecCCC
Q psy8087 582 PGGHELKVDYWEVVGLAPA 600 (658)
Q Consensus 582 ~g~~El~~~~i~vls~~~~ 600 (658)
+|++||+++++++|++|..
T Consensus 72 ~~~~Ei~v~~i~il~~a~~ 90 (93)
T d1n9wa1 72 PGGLEVQAKEVEVLSPALE 90 (93)
T ss_dssp TTSEEEEEEEEEEEECCCS
T ss_pred CCCEEEEEeEEEEEecCCC
Confidence 7999999999999999863
No 11
>d1c0aa1 b.40.4.1 (A:1-106) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]}
Probab=99.74 E-value=1e-17 Score=146.32 Aligned_cols=90 Identities=27% Similarity=0.403 Sum_probs=79.5
Q ss_pred CccCCcEEEEEEEEEeeecCCCceEEEEEEeCCEEEEEEEcCCccc-hHHhccCCCCcEEEEEEEEEecCCC----CCCC
Q psy8087 508 EKYRDKRVTIFGWVHRLRRQGKGLMFVTLRDGSGFIQCVLADILCQ-TEHALLLSTESSVQFRGRIEKVPEG----KSAP 582 (658)
Q Consensus 508 ~~~~g~~V~v~GwI~~~R~~Gkkl~Fi~Lrd~~~~iQvv~~~~~~~-~~~~~~L~~gs~V~V~G~v~~~~~~----~~~~ 582 (658)
..+.|++|+|+|||+++|.+| +++|++|||++|.+||++.++... ++.+..|+.||+|.|+|+|..++.+ +.++
T Consensus 11 ~~~~g~~V~v~GWv~~~R~~g-~i~Fi~LRD~~G~~Q~v~~~~~~~~~~~~~~l~~Es~v~V~G~V~~r~~~~~n~~~~t 89 (106)
T d1c0aa1 11 LSHVGQQVTLCGWVNRRRDLG-SLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMAT 89 (106)
T ss_dssp GGGTTCEEEEEEEEEEEEECS-SCEEEEEEETTEEEEEEECGGGHHHHHHHTTCCTTCEEEEEEEEEECCTTTCCTTSTT
T ss_pred hHHCCCEEEEEEEEEEeeeCC-CcEEEEEEcCCeEEeEEecccchhHHHHHHhhCccceEEEEeEEeccCccccCCCCCC
Confidence 467899999999999999998 799999999999999999865433 4667889999999999999988754 3567
Q ss_pred CceEEEEEEEEEEecC
Q psy8087 583 GGHELKVDYWEVVGLA 598 (658)
Q Consensus 583 g~~El~~~~i~vls~~ 598 (658)
|++||.+++++|||+|
T Consensus 90 g~iEi~v~~i~vl~~a 105 (106)
T d1c0aa1 90 GEIEVLASSLTIINRA 105 (106)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CcEEEEEeEEEEEeCC
Confidence 9999999999999987
No 12
>d1b8aa1 b.40.4.1 (A:1-103) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]}
Probab=99.73 E-value=1.7e-17 Score=144.24 Aligned_cols=88 Identities=25% Similarity=0.397 Sum_probs=77.6
Q ss_pred CccCCcEEEEEEEEEeeecCCCceEEEEEEeCCEEEEEEEcCCcc---chHHhccCCCCcEEEEEEEEEecCCCCCCCCc
Q psy8087 508 EKYRDKRVTIFGWVHRLRRQGKGLMFVTLRDGSGFIQCVLADILC---QTEHALLLSTESSVQFRGRIEKVPEGKSAPGG 584 (658)
Q Consensus 508 ~~~~g~~V~v~GwI~~~R~~Gkkl~Fi~Lrd~~~~iQvv~~~~~~---~~~~~~~L~~gs~V~V~G~v~~~~~~~~~~g~ 584 (658)
+.+.|++|+|+|||+++|.+| +++|++|||++|.+||+++++.. .++.+..|+.||+|.|+|++..+|. ++++
T Consensus 12 ~~~~G~~V~v~Gwv~~~R~~g-~i~Fi~LrD~sg~iQ~v~~~~~~~~~~~~~~~~l~~es~v~V~G~v~~~~~---~~~~ 87 (103)
T d1b8aa1 12 EELNGQKVKVAGWVWEVKDLG-GIKFLWIRDRDGIVQITAPKKKVDPELFKLIPKLRSEDVVAVEGVVNFTPK---AKLG 87 (103)
T ss_dssp GGGTTCEEEEEEEEEEEEEET-TEEEEEEEETTEEEEEEEETTTSCHHHHHHGGGCCTTCEEEEEEEEEECTT---STTS
T ss_pred hhHCCCEEEEEEEEehhccCC-CcEEEEEEcCCEeeeEEEeccccchhhhhHHhhCCcceEEEEEEEEEECCC---CCcc
Confidence 456899999999999999998 79999999999999999987542 2577889999999999999998773 3677
Q ss_pred eEEEEEEEEEEecCC
Q psy8087 585 HELKVDYWEVVGLAP 599 (658)
Q Consensus 585 ~El~~~~i~vls~~~ 599 (658)
+||.+++++|||+|.
T Consensus 88 iEi~v~~i~ils~a~ 102 (103)
T d1b8aa1 88 FEILPEKIVVLNRAE 102 (103)
T ss_dssp EEEEEEEEEEEECBC
T ss_pred EEEEeeEEEEEEecC
Confidence 999999999999973
No 13
>d1eova1 b.40.4.1 (A:71-204) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.72 E-value=3.1e-17 Score=149.49 Aligned_cols=102 Identities=30% Similarity=0.336 Sum_probs=85.2
Q ss_pred cceeecccC--CccCCcEEEEEEEEEeeecCCCceEEEEEEeCCEEEEEEEcCCcc-----c-hHHhccCCCCcEEEEEE
Q psy8087 499 AVRIKIKDG--EKYRDKRVTIFGWVHRLRRQGKGLMFVTLRDGSGFIQCVLADILC-----Q-TEHALLLSTESSVQFRG 570 (658)
Q Consensus 499 ~~~~~i~~~--~~~~g~~V~v~GwI~~~R~~Gkkl~Fi~Lrd~~~~iQvv~~~~~~-----~-~~~~~~L~~gs~V~V~G 570 (658)
..++++.++ ..+.|++|+|+|||+++|.+|+|++|++|||+++.+||++..+.. . ++++..|++||+|.|+|
T Consensus 21 ~~r~~i~dl~~~~~~g~~V~v~GwV~~~R~~G~kl~F~~LrD~sg~iQ~~v~~~~~~~~~~~~~~~~~~l~~es~V~V~G 100 (134)
T d1eova1 21 QKRVKFVDLDEAKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLNLESIVLVRG 100 (134)
T ss_dssp CCCCCGGGCCTTTTTTCEEEEEEEEEEEEECSSSEEEEEEEETTEEEEEEEECCSSSSSCHHHHHHHTTCCTTCEEEEEE
T ss_pred cEEEEeccccchhcCCCEEEEEEEEEEEEeCCCcEEEEEEEcCCCcEEEEEEeccccchhHHHHHHHhcCCCCCEEEEEE
Confidence 445566554 457799999999999999999889999999999999999986422 1 36778999999999999
Q ss_pred EEEecCCC--CCCCCceEEEEEEEEEEecCCC
Q psy8087 571 RIEKVPEG--KSAPGGHELKVDYWEVVGLAPA 600 (658)
Q Consensus 571 ~v~~~~~~--~~~~g~~El~~~~i~vls~~~~ 600 (658)
+|.+++.+ ...+|++||+++++++||+|+.
T Consensus 101 ~v~~~~~~~~~~~~~~~Ei~v~~i~vls~a~~ 132 (134)
T d1eova1 101 IVKKVDEPIKSATVQNLEIHITKIYTISETPE 132 (134)
T ss_dssp EEEECSSCCTTSSEEEEEEEEEEEEEEECCCS
T ss_pred EEEeCCccCCCCCCCcEEEEEEEEEEEeCCCC
Confidence 99998754 2346899999999999999863
No 14
>d1b8aa1 b.40.4.1 (A:1-103) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]}
Probab=99.44 E-value=2.5e-13 Score=117.52 Aligned_cols=86 Identities=16% Similarity=0.132 Sum_probs=70.2
Q ss_pred CccccccccccCCCccCCcEEEEeEEeecceecCCCeEEEEEEcCCeEEEEEEecccch--hhh-hhcCCCccEEEEEEE
Q psy8087 53 SPCEVGYITCEGPAGYIITNINIPAIPGPPAIPGKGLMFVTLRDGSGFIQCVLADILCQ--TEH-ALLLSTESSVQFRGR 129 (658)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~v~~~Grv~~~r~~gk~l~Fi~LrD~~~~iQvv~~~~~~~--~~~-~~~l~~es~V~v~G~ 129 (658)
+++.++++... ..|++|+|+|||+++|.+|| ++|++|||++|.||||++++... .|. ...++.||+|.|+|.
T Consensus 3 RTh~~~el~~~----~~G~~V~v~Gwv~~~R~~g~-i~Fi~LrD~sg~iQ~v~~~~~~~~~~~~~~~~l~~es~v~V~G~ 77 (103)
T d1b8aa1 3 RTHYSSEITEE----LNGQKVKVAGWVWEVKDLGG-IKFLWIRDRDGIVQITAPKKKVDPELFKLIPKLRSEDVVAVEGV 77 (103)
T ss_dssp CSCCGGGCCGG----GTTCEEEEEEEEEEEEEETT-EEEEEEEETTEEEEEEEETTTSCHHHHHHGGGCCTTCEEEEEEE
T ss_pred cccChhhCChh----HCCCEEEEEEEEehhccCCC-cEEEEEEcCCEeeeEEEeccccchhhhhHHhhCCcceEEEEEEE
Confidence 45677888554 68999999999999999885 99999999999999999877542 233 357999999999999
Q ss_pred eEeCCCCc--cceEec
Q psy8087 130 IEKVPEEN--MKVQLI 143 (658)
Q Consensus 130 l~~~p~~~--~d~~l~ 143 (658)
+..+|.+. +|+.++
T Consensus 78 v~~~~~~~~~iEi~v~ 93 (103)
T d1b8aa1 78 VNFTPKAKLGFEILPE 93 (103)
T ss_dssp EEECTTSTTSEEEEEE
T ss_pred EEECCCCCccEEEEee
Confidence 99988665 556554
No 15
>d1c0aa1 b.40.4.1 (A:1-106) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]}
Probab=99.42 E-value=5.5e-13 Score=115.92 Aligned_cols=78 Identities=18% Similarity=0.229 Sum_probs=64.7
Q ss_pred ccccccccccCCCccCCcEEEEeEEeecceecCCCeEEEEEEcCCeEEEEEEecccchhhh-hhcCCCccEEEEEEEeEe
Q psy8087 54 PCEVGYITCEGPAGYIITNINIPAIPGPPAIPGKGLMFVTLRDGSGFIQCVLADILCQTEH-ALLLSTESSVQFRGRIEK 132 (658)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~v~~~Grv~~~r~~gk~l~Fi~LrD~~~~iQvv~~~~~~~~~~-~~~l~~es~V~v~G~l~~ 132 (658)
++.++++... .+|++|+|+|||+++|.+| +++|++|||++|.+||++.++....+. ...|+.||+|.|+|+|..
T Consensus 3 th~cgeL~~~----~~g~~V~v~GWv~~~R~~g-~i~Fi~LRD~~G~~Q~v~~~~~~~~~~~~~~l~~Es~v~V~G~V~~ 77 (106)
T d1c0aa1 3 TEYCGQLRLS----HVGQQVTLCGWVNRRRDLG-SLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRA 77 (106)
T ss_dssp SSCGGGCCGG----GTTCEEEEEEEEEEEEECS-SCEEEEEEETTEEEEEEECGGGHHHHHHHTTCCTTCEEEEEEEEEE
T ss_pred ceEcccCChH----HCCCEEEEEEEEEEeeeCC-CcEEEEEEcCCeEEeEEecccchhHHHHHHhhCccceEEEEeEEec
Confidence 5567888543 7899999999999998877 599999999999999999876544332 357999999999999998
Q ss_pred CCCC
Q psy8087 133 VPEE 136 (658)
Q Consensus 133 ~p~~ 136 (658)
.|.+
T Consensus 78 r~~~ 81 (106)
T d1c0aa1 78 RDEK 81 (106)
T ss_dssp CCTT
T ss_pred cCcc
Confidence 7754
No 16
>d1l0wa1 b.40.4.1 (A:1-104) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]}
Probab=99.39 E-value=7.6e-13 Score=114.45 Aligned_cols=77 Identities=22% Similarity=0.248 Sum_probs=63.9
Q ss_pred CccccccccccCCCccCCcEEEEeEEeecceecCCCeEEEEEEcCCeEEEEEEecccchhhh-hhcCCCccEEEEEEEeE
Q psy8087 53 SPCEVGYITCEGPAGYIITNINIPAIPGPPAIPGKGLMFVTLRDGSGFIQCVLADILCQTEH-ALLLSTESSVQFRGRIE 131 (658)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~v~~~Grv~~~r~~gk~l~Fi~LrD~~~~iQvv~~~~~~~~~~-~~~l~~es~V~v~G~l~ 131 (658)
+++.++++... .+|++|+|+|||+++|.+| +++|++|||++|.+|++++.+. +.|+ ...++.||+|.|+|.|.
T Consensus 3 RTh~~geL~~~----~~g~~V~l~GWV~~~R~~g-~i~Fi~LRD~~G~iQ~v~~~~~-~~~~~~~~l~~Es~I~V~G~V~ 76 (104)
T d1l0wa1 3 RTHYAGSLRET----HVGEEVVLEGWVNRRRDLG-GLIFLDLRDREGLVQLVAHPAS-PAYATAERVRPEWVVRAKGLVR 76 (104)
T ss_dssp CSSCGGGCCGG----GTTCEEEEEEEEEEEEECS-SCEEEEEEETTEEEEEEECTTS-TTHHHHTTCCTTCEEEEEEEEE
T ss_pred cccccccCChH----HCCCEEEEEEEEEehhcCC-CeEEEEEECCCCceEEecccch-hHHHHHhhcCcccEEEEEEEEe
Confidence 46677888543 7899999999999988777 5999999999999999998654 3343 35799999999999998
Q ss_pred eCCC
Q psy8087 132 KVPE 135 (658)
Q Consensus 132 ~~p~ 135 (658)
..|.
T Consensus 77 ~r~~ 80 (104)
T d1l0wa1 77 LRPE 80 (104)
T ss_dssp ECSS
T ss_pred eCCc
Confidence 7664
No 17
>d1e1oa1 b.40.4.1 (A:11-153) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]}
Probab=99.38 E-value=6.5e-13 Score=121.53 Aligned_cols=96 Identities=21% Similarity=0.166 Sum_probs=75.1
Q ss_pred CCCC-CCCccccccccccCCCc------cCCcEEEEeEEeecceecCCCeEEEEEEcCCeEEEEEEecccch--hhh--h
Q psy8087 47 PFPL-FPSPCEVGYITCEGPAG------YIITNINIPAIPGPPAIPGKGLMFVTLRDGSGFIQCVLADILCQ--TEH--A 115 (658)
Q Consensus 47 ~~~~-~~~~~~~~~~~~~~~~~------~~~~~v~~~Grv~~~r~~gk~l~Fi~LrD~~~~iQvv~~~~~~~--~~~--~ 115 (658)
|||. |+.++++.++.+..... ..+..|+|+|||+++|.+|| ++|++|+|++|.||++++++... .|. .
T Consensus 24 pYP~~~~~t~~~~ei~~~~~~~~~~~~~~~~~~V~vaGRI~~~R~~Gk-~~F~~i~D~~g~iQi~~~~~~~~~~~~~~~~ 102 (143)
T d1e1oa1 24 AFPNDFRRDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGK-ASFVTLQDVGGRIQLYVARDSLPEGVYNDQF 102 (143)
T ss_dssp SSCCCCCCSCCHHHHHHHHTTCCHHHHHHHCCEEEEEEEEEEEEEETT-EEEEEEEETTEEEEEEEETTTSSTTHHHHTG
T ss_pred CCCCCCcCCccHHHHHHHHhcccchhhhccCceEEEEEEEEEEcccCC-eeEEEEEeCCceEEEEEccccchhhhHHHHH
Confidence 5555 66677777775432111 23568999999999999996 89999999999999999987542 232 2
Q ss_pred hcCCCccEEEEEEEeEeCCCCccceEec
Q psy8087 116 LLLSTESSVQFRGRIEKVPEENMKVQLI 143 (658)
Q Consensus 116 ~~l~~es~V~v~G~l~~~p~~~~d~~l~ 143 (658)
..+..||+|.|+|.+..+..|++.+.++
T Consensus 103 k~ld~GDiIgv~G~~~~TktGElsi~~~ 130 (143)
T d1e1oa1 103 KKWDLGDIIGARGTLFKTQTGELSIHCT 130 (143)
T ss_dssp GGCCTTCEEEEEEEEEECTTCCEEEEEE
T ss_pred hcCCcccEEEeecccEECCCCcEEEEee
Confidence 5799999999999999999998777764
No 18
>d1eova1 b.40.4.1 (A:71-204) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.31 E-value=7.7e-12 Score=113.28 Aligned_cols=78 Identities=26% Similarity=0.236 Sum_probs=63.9
Q ss_pred ccCCcEEEEeEEeecceecCCCeEEEEEEcCCeEEEEEEecccch-----hh-hhhcCCCccEEEEEEEeEeCCCC----
Q psy8087 67 GYIITNINIPAIPGPPAIPGKGLMFVTLRDGSGFIQCVLADILCQ-----TE-HALLLSTESSVQFRGRIEKVPEE---- 136 (658)
Q Consensus 67 ~~~~~~v~~~Grv~~~r~~gk~l~Fi~LrD~~~~iQvv~~~~~~~-----~~-~~~~l~~es~V~v~G~l~~~p~~---- 136 (658)
...|+.|+|+|||+++|++|++++|++|||++|.+|+++..+... .+ .+.+|+.||+|.|+|.|..+|.+
T Consensus 33 ~~~g~~V~v~GwV~~~R~~G~kl~F~~LrD~sg~iQ~~v~~~~~~~~~~~~~~~~~~l~~es~V~V~G~v~~~~~~~~~~ 112 (134)
T d1eova1 33 KDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLNLESIVLVRGIVKKVDEPIKSA 112 (134)
T ss_dssp TTTTCEEEEEEEEEEEEECSSSEEEEEEEETTEEEEEEEECCSSSSSCHHHHHHHTTCCTTCEEEEEEEEEECSSCCTTS
T ss_pred hcCCCEEEEEEEEEEEEeCCCcEEEEEEEcCCCcEEEEEEeccccchhHHHHHHHhcCCCCCEEEEEEEEEeCCccCCCC
Confidence 467899999999999999998899999999999999999875432 12 24589999999999999988753
Q ss_pred ---ccceEecC
Q psy8087 137 ---NMKVQLIH 144 (658)
Q Consensus 137 ---~~d~~l~~ 144 (658)
.+|+.+..
T Consensus 113 ~~~~~Ei~v~~ 123 (134)
T d1eova1 113 TVQNLEIHITK 123 (134)
T ss_dssp SEEEEEEEEEE
T ss_pred CCCcEEEEEEE
Confidence 25666543
No 19
>d1n9wa1 b.40.4.1 (A:1-93) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]}
Probab=99.29 E-value=7.8e-12 Score=105.98 Aligned_cols=68 Identities=24% Similarity=0.294 Sum_probs=59.0
Q ss_pred cCCcEEEEeEEeecceecCCCeEEEEEEcCCeEEEEEEecccchhhhhhcCCCccEEEEEEEeEeCCC--CccceEec
Q psy8087 68 YIITNINIPAIPGPPAIPGKGLMFVTLRDGSGFIQCVLADILCQTEHALLLSTESSVQFRGRIEKVPE--ENMKVQLI 143 (658)
Q Consensus 68 ~~~~~v~~~Grv~~~r~~gk~l~Fi~LrD~~~~iQvv~~~~~~~~~~~~~l~~es~V~v~G~l~~~p~--~~~d~~l~ 143 (658)
..|++|+|+|||+++|.+| +++|++|||++|.+||++++.. .++.||+|.|+|.+..+|. +.+|+.++
T Consensus 11 ~~g~~V~v~GwV~~~R~~g-k~~Fi~LrD~sg~iQ~v~~~~~-------~~~~e~~v~v~G~v~~~~~~~~~~Ei~v~ 80 (93)
T d1n9wa1 11 HVGQEVELLGFLHWRRDLG-RIQFLLLRDRSGVVQVVTGGLK-------LPLPESALRVRGLVVENAKAPGGLEVQAK 80 (93)
T ss_dssp CTTSEEEEEEEEEEEEECS-SEEEEEEEETTEEEEEEEESCC-------CCCTTCEEEEEEEEEECTTSTTSEEEEEE
T ss_pred cCCCEEEEEEEEEeEEeCC-CcEEEEEEcCCccceEEecccc-------ccccceEEEEEEEEEECCCCCCCEEEEEe
Confidence 5789999999999999887 4999999999999999998753 4778999999999999886 44666664
No 20
>d1eova2 d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.96 E-value=6.7e-11 Score=124.05 Aligned_cols=49 Identities=22% Similarity=0.327 Sum_probs=47.5
Q ss_pred CCChhhhcccceeeeechhhHHHHHHHHHHHHHHHHHhhcCCcEEecCC
Q psy8087 610 EALPDVQLDNRHIMIRGENTSRVLLMRSVLLQALRAHFADRNYTEVNIE 658 (658)
Q Consensus 610 ~~~~e~r~~~R~LdLR~~~~~~ifr~Rs~i~~~iR~fL~~~gF~EVeTp 658 (658)
.++.|+|++|||||||++.++++||+||+|++++|+||+++||+||+||
T Consensus 21 ~~~~e~r~~~R~lDlr~~~~~~ilr~Rs~i~~~iR~ff~~~gflEV~TP 69 (353)
T d1eova2 21 VVNLDTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTP 69 (353)
T ss_dssp CCCHHHHHHTHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCC
T ss_pred CCCHHHHhhhhHHhhCCHhHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
Confidence 4689999999999999999999999999999999999999999999999
No 21
>d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]}
Probab=98.96 E-value=1e-10 Score=122.85 Aligned_cols=49 Identities=18% Similarity=0.331 Sum_probs=47.0
Q ss_pred CCChhhhcccceeeeechhhHHHHHHHHHHHHHHHHHhhcCCcEEecCC
Q psy8087 610 EALPDVQLDNRHIMIRGENTSRVLLMRSVLLQALRAHFADRNYTEVNIE 658 (658)
Q Consensus 610 ~~~~e~r~~~R~LdLR~~~~~~ifr~Rs~i~~~iR~fL~~~gF~EVeTp 658 (658)
.++.|+|+++||||||++.++++||+||+|+++||+||.++||+||+||
T Consensus 17 ~~~~~~Rl~~R~LdLR~~~~~~ilr~Rs~i~~~iR~ff~~~gfiEV~TP 65 (356)
T d1l0wa3 17 EASEELRLKYRYLDLRRRRMQENLRLRHRVIKAIWDFLDREGFVQVETP 65 (356)
T ss_dssp CCCHHHHHHTHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCC
T ss_pred ccCHHHHhhchhhhhCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
Confidence 4567899999999999999999999999999999999999999999999
No 22
>d1jjca_ d.104.1.1 (A:) Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS {Thermus thermophilus [TaxId: 274]}
Probab=98.91 E-value=5.1e-09 Score=104.12 Aligned_cols=107 Identities=16% Similarity=0.057 Sum_probs=70.1
Q ss_pred CchHHHhhhCCcEEEcCCccccc--------cCC--CCcc---ceeeccC------------Ccceeec--cCHHHHHHH
Q psy8087 160 GYPPEVSLANGIAKVTPPTLVQT--------QVE--GGST---LFSLNFF------------GEPAYLT--QSSQLYLET 212 (658)
Q Consensus 160 ~~iR~fl~~~gF~EV~TPiL~~~--------~~e--G~~~---~F~~~~~------------~~~~~L~--~Spqlylk~ 212 (658)
..|+++|.+.||-|++.|.+... .+. .|.+ .|.++.- ....-|| .|+-... .
T Consensus 24 ~~i~~if~~~GF~~~~gp~ies~~~NFDaLn~P~dHPAR~~~DTfYi~~~~~~~~~~~~~~~~~~~lLRTHTS~~q~r-~ 102 (266)
T d1jjca_ 24 RELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSPMQVR-Y 102 (266)
T ss_dssp HHHHHHHHTTTCEECCCCSEEEHHHHTGGGTCCTTSGGGGGSCCCBEECSSCCEECTTSCEECSCEEECSSSTHHHHH-H
T ss_pred HHHHHHHHHcCCeEeeCCccccchhhhhcccCCcccchhcccceEEEecccccccCcccccchhhhhhccCCcHHHHH-H
Confidence 58999999999999999987422 011 1111 1211100 1123454 4543322 2
Q ss_pred hcccC--CcEEEEeeeeecCCCCCccCcceeeeeeeEeecC--CHHHHHHHHHHHHHHHH
Q psy8087 213 CLPAL--GDVYCIAQSYRAENSRTRRHLAEYTHVEAECAFL--TFDDLLDKLEDLICDTV 268 (658)
Q Consensus 213 li~g~--~rvfeI~~~FR~E~~~~~rHl~EFt~lE~e~a~~--d~~~~m~~~e~li~~i~ 268 (658)
+..+. -|++.+|+|||+|.+|. +|.|+|.|+|.-.... ++.+++..++.+++.++
T Consensus 103 ~~~~~~p~~~~~~g~VyRrd~iD~-tH~p~FhQ~eg~~vd~~~~~~~Lk~~l~~~~~~~f 161 (266)
T d1jjca_ 103 MVAHTPPFRIVVPGRVFRFEQTDA-THEAVFHQLEGLVVGEGIAMAHLKGAIYELAQALF 161 (266)
T ss_dssp HHHSCSSEEEEEEEEEECCSCCCS-SCCSEEEEEEEEEEETTCCHHHHHHHHHHHHHHHH
T ss_pred HhccCCCceEEecccceecCCCCC-cccccceeeeeeeccccccHHHHHHHHHHHHHHhc
Confidence 22243 48999999999999976 9999999999877654 68888877777776553
No 23
>d12asa_ d.104.1.1 (A:) Asparagine synthetase {Escherichia coli [TaxId: 562]}
Probab=98.25 E-value=1.9e-05 Score=77.75 Aligned_cols=258 Identities=15% Similarity=0.153 Sum_probs=164.5
Q ss_pred hhCCcEEEcCCccccccCCCCc------c-c--eeeccC-CcceeeccCHHHHHHHhcc--cC---CcEEEEeeeeec-C
Q psy8087 167 LANGIAKVTPPTLVQTQVEGGS------T-L--FSLNFF-GEPAYLTQSSQLYLETCLP--AL---GDVYCIAQSYRA-E 230 (658)
Q Consensus 167 ~~~gF~EV~TPiL~~~~~eG~~------~-~--F~~~~~-~~~~~L~~Spqlylk~li~--g~---~rvfeI~~~FR~-E 230 (658)
.+.+.++|..|+++.... |-. + | |.+..+ +..+-.-+|---|+.+++. || +.+|.=..+.|. |
T Consensus 22 ~~LnL~rVsAPLfv~~~s-GlNDnLnG~ErpV~F~ik~~~~~~~EiVhSLAKWKR~aL~~y~f~~geGlytdMnAiR~DE 100 (327)
T d12asa_ 22 ERLGLIEVQAPILSRVGD-GTQDNLSGAEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPDE 100 (327)
T ss_dssp HHHCEEECCCCSEEETTS-SCSCCTTTTCCCCEECCSSSTTCCEEECSCCTTHHHHHHHHTTCCTTCEEEEEEEEECTTC
T ss_pred HHhCcEEecCCeEEcCCC-CcccCCCCeeeeeEEecCCCCCCeeEEEeehHHHHHHHHHhcCCCCCceeccCCccccCCc
Confidence 346999999999975433 211 1 2 444433 6778888999999998886 66 569998887775 6
Q ss_pred CCCCccCcceeeeeeeEeecCCHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCCCCCCCcceeeHHHHHHHHHHcCC
Q psy8087 231 NSRTRRHLAEYTHVEAECAFLTFDDLLDKLEDLICDTVDRVMATHGDLVRQMNPNFEPPARPFLRMNYADAIEYLRKHEI 310 (658)
Q Consensus 231 ~~~~~rHl~EFt~lE~e~a~~d~~~~m~~~e~li~~i~~~~~~~~~~~~~~~~~~~~~~~~pf~rit~~ea~~~l~~~g~ 310 (658)
+.-++.|.-=+-|-|||.....-+.-++.+.+.++.++..+..........+... ..+ | ..|+|..+.+++..+
T Consensus 101 d~ldn~HSiyVDQWDWEkvI~~~dR~l~~Lk~tV~~Iy~~ik~te~~v~~~y~~~-~~L--p-~~I~FitsqeL~~~Y-- 174 (327)
T d12asa_ 101 DRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEEFGLA-PFL--P-DQIHFVHSQELLSRY-- 174 (327)
T ss_dssp SCCCSSCCSEEEEEEEEEECCTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHSCCC-CCS--C-SSCEEEEHHHHHHHS--
T ss_pred ccCCCceeEEEcccchhhhcCccccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-cCC--C-CceEEEehHHHHHHC--
Confidence 5324599999999999999876666677777777777777765433222222211 111 1 344554444444333
Q ss_pred CCCCCCCcccCCCCCCchhhhhhcccCCcEEEEeCCCCCCCC--CCccCCCCcCce---------eEEEEEeC------C
Q psy8087 311 RKPDNTEYEFGEDIPEMPERKMTDQINRPIMLCRFPADIKSF--YMSKCPENPALT---------ESVDVLFP------N 373 (658)
Q Consensus 311 ~~~~~~~~~~g~~l~~~~e~~l~~~~~~p~fi~~~P~~~~pf--y~~~~~~~~~~~---------~~fdL~~~------G 373 (658)
|++. ...=|..+.+.. .-|||+.---.++-= -..+.|+...+. ..=|+++- .
T Consensus 175 --P~Lt--------~keRE~~i~ke~-gAVFi~~IG~~L~~G~~Hd~RApDYDDW~t~~~~~~~gLNGDIlvw~~vl~~a 243 (327)
T d12asa_ 175 --PDLD--------AKGRERAIAKDL-GAVFLVGIGGKLSDGHRHDVRAPDYDDWSTPSELGHAGLNGDILVWNPVLEDA 243 (327)
T ss_dssp --SSSC--------HHHHHHHHHHHH-SEEEEECCSSCCSSSCCSSCCCTTTBCCSSBCTTSSBCSEEEEEEEETTTTEE
T ss_pred --CCCC--------hHHHHHHHHHHh-CcEEEEecCCcCCCCCcCCCCCCCCCcccCcccccccCccceEEEechhcCce
Confidence 1111 112233333322 346776633322210 011112222333 56677653 6
Q ss_pred cceeeeceeccCCHHHHHHHHHHcCCCCCCCcchHHHhhcC-CCCccceecchhHHHHHHhcccCcchhhHH
Q psy8087 374 VGEVIGGSMRIWDPEELLAGYKREGIDPAPYYWYTDQRKYG-STPHGGYGLGLERVLCWLLNQYHVRDKYQL 444 (658)
Q Consensus 374 ~~Ei~~G~~r~~d~~~~~~~~~~~g~~~~~~~~yl~a~~~G-~pP~gG~GiGidRL~m~l~g~~~Irdvi~f 444 (658)
+ ||.+.+.|.+. +.+++.++..|.+...--.|-.++-.| +|-|-|.|||=.||+|+|++..+|-+|.+=
T Consensus 244 ~-ElSSMGIRVd~-~~L~~QL~~~~~~~r~~l~~Hk~ll~~~LP~TIGGGIGQSRlcM~lL~KaHIGEVQaS 313 (327)
T d12asa_ 244 F-ELSSMGIRVDA-DTLKHQLALTGDEDRLELEWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQAG 313 (327)
T ss_dssp E-EEEEEEEBCCH-HHHHHHHHHHTCTTGGGSHHHHHHHTTCSCCEEEEEEEHHHHHHHHHTCSCGGGTSCC
T ss_pred e-eeecceeEECH-HHHHHHHHHcCChhhhcCHHHHHHHcCCCCccccccccHHHHHHHHHccCcccceeee
Confidence 7 99999999865 889999988775543334577777777 899999999999999999999999999763
No 24
>d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]}
Probab=97.80 E-value=0.00012 Score=74.25 Aligned_cols=92 Identities=18% Similarity=0.253 Sum_probs=60.6
Q ss_pred CchHHHhhhCCcEEEcCCccccccC----CCC-c-----cceee-ccCCcceeeccC--HHHHH---HHhccc--CCcEE
Q psy8087 160 GYPPEVSLANGIAKVTPPTLVQTQV----EGG-S-----TLFSL-NFFGEPAYLTQS--SQLYL---ETCLPA--LGDVY 221 (658)
Q Consensus 160 ~~iR~fl~~~gF~EV~TPiL~~~~~----eG~-~-----~~F~~-~~~~~~~~L~~S--pqlyl---k~li~g--~~rvf 221 (658)
..+++.|...||.+|+||+|-.... .|. . ..+.. +.-|..+.||-- +++-. +..... --|+|
T Consensus 24 ~~l~~~f~~~Gy~~I~tP~lE~~d~~~~~~g~~~~~~~~~~~~~~d~~g~~l~Lr~D~T~~iaR~~~~~~~~~~~p~r~~ 103 (322)
T d1kmma2 24 GTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLW 103 (322)
T ss_dssp HHHHHHHHTTTCEECBCCSEEEHHHHHHHHCTTSHHHHHTCEEEECTTSCEEEECSCSHHHHHHHHHHTTCSTTCCEEEE
T ss_pred HHHHHHHHHCCCeEeECcccccHHHhhcccCcchhhhHHHHhhhhhcccccccccccccchhhHHHHhhhhhhhhhhhHh
Confidence 4788999999999999999843210 111 1 12322 344678888743 22222 122211 24799
Q ss_pred EEeeeeecCCCCCccCcceeeeeeeEeecCC
Q psy8087 222 CIAQSYRAENSRTRRHLAEYTHVEAECAFLT 252 (658)
Q Consensus 222 eI~~~FR~E~~~~~rHl~EFt~lE~e~a~~d 252 (658)
.+|++||.|.....|. -||+|+.+|.-..+
T Consensus 104 y~g~v~r~~~~~~gr~-re~~Q~g~EiiG~~ 133 (322)
T d1kmma2 104 YIGPMFRHERPQKGRY-RQFHQLGCEVFGLQ 133 (322)
T ss_dssp EEEEEECCCCCBTTBC-SEEEEEEEEEESCC
T ss_pred hcccccccCCCCCCcc-chhhhhhHHHhccc
Confidence 9999999998766555 59999999998764
No 25
>d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=97.79 E-value=3.9e-05 Score=77.97 Aligned_cols=92 Identities=12% Similarity=0.132 Sum_probs=56.9
Q ss_pred CchHHHhhhCCcEEEcCCccccccC----CCCc------cceee-ccCCcceeeccCHHHHHHHhcc-c-----C---Cc
Q psy8087 160 GYPPEVSLANGIAKVTPPTLVQTQV----EGGS------TLFSL-NFFGEPAYLTQSSQLYLETCLP-A-----L---GD 219 (658)
Q Consensus 160 ~~iR~fl~~~gF~EV~TPiL~~~~~----eG~~------~~F~~-~~~~~~~~L~~Spqlylk~li~-g-----~---~r 219 (658)
+.+++.|...||-+|.||+|-.... .|.. ..|.. +..|....|+..+-.-..+.+. . . -|
T Consensus 24 ~~l~~~f~~~Gy~~I~tP~lE~~d~l~~~~g~~~~~~~~~~~~~~d~~~~~~~lr~d~t~~~~r~~~~~~~~~~~~~p~R 103 (325)
T d1qe0a2 24 NQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEGTAAVVRSYIEHKMQGNPNQPIK 103 (325)
T ss_dssp HHHHHHHHHHTCEECBCCSEEEHHHHCC-----------CCEEECHHHHCCEEECSCSHHHHHHHHHHTTGGGCSSCSEE
T ss_pred HHHHHHHHHcCCeEeeCcccccHHHhccccCCchhHHHHHHhhhhccccccccccccccccHHHHHHhhccccccccchh
Confidence 4788999999999999999843210 1111 12221 2335667777665555444332 1 1 28
Q ss_pred EEEEeeeeecCCCCCccCcceeeeeeeEeecCC
Q psy8087 220 VYCIAQSYRAENSRTRRHLAEYTHVEAECAFLT 252 (658)
Q Consensus 220 vfeI~~~FR~E~~~~~rHl~EFt~lE~e~a~~d 252 (658)
+|.+|+|||.+.....|+ -||||+.+|.-..+
T Consensus 104 ~~Y~g~VfR~~~~~~~~~-rE~~Q~G~EiiG~~ 135 (325)
T d1qe0a2 104 LYYNGPMFRYERKQKGRY-RQFNQFGVEAIGAE 135 (325)
T ss_dssp EEEEEEEECC-------C-CEEEEEEEEEESCC
T ss_pred hheecceeeeccccCCcc-ceeeecceeecCCc
Confidence 999999999998765454 59999999998764
No 26
>d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=97.25 E-value=0.00031 Score=70.29 Aligned_cols=106 Identities=14% Similarity=0.107 Sum_probs=73.5
Q ss_pred CchHHHhhhCCcEEEcCCccccccC---CC-----Cccceee--ccCCcceeeccCHHHHHHHhccc-------C-CcEE
Q psy8087 160 GYPPEVSLANGIAKVTPPTLVQTQV---EG-----GSTLFSL--NFFGEPAYLTQSSQLYLETCLPA-------L-GDVY 221 (658)
Q Consensus 160 ~~iR~fl~~~gF~EV~TPiL~~~~~---eG-----~~~~F~~--~~~~~~~~L~~Spqlylk~li~g-------~-~rvf 221 (658)
+.+|+.+.+.||.||.||.|..... .| +.+.|.+ ..-+.+++|+-..+-.+-.+... + =|+|
T Consensus 38 ~~~~~~~~~~G~~eV~~P~l~~~~l~~~sG~~~~~~~~~~~~~~~~~~~~~~L~pt~e~~~~~~~~~~~~sy~dLPlr~~ 117 (291)
T d1nyra4 38 RYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIA 117 (291)
T ss_dssp HHHHHHHHHTTEEECBCCSEEETHHHHHHTHHHHCTTSSCCCEEETTTEEEEECSSSHHHHHHHHHTSCCBGGGCCEEEE
T ss_pred HHHHHHHHHcCCEEEECccccchhHhhhhccccccccceEEEeeccccccccccccchhHHHHhhhcEeccccccceEEe
Confidence 5789999999999999999975422 11 1123322 22356799998888776655431 3 3899
Q ss_pred EEeeeeecCCCCCccC----cceeeeeeeEeecCCHHHHHHHHHHHHHHH
Q psy8087 222 CIAQSYRAENSRTRRH----LAEYTHVEAECAFLTFDDLLDKLEDLICDT 267 (658)
Q Consensus 222 eI~~~FR~E~~~~~rH----l~EFt~lE~e~a~~d~~~~m~~~e~li~~i 267 (658)
++++|||+|.+.. .| .-||+|.|.+.- .+.+++.+.+++++..+
T Consensus 118 ~~~~~fR~E~~~~-~~Gl~Rvr~F~~~d~~~f-~~~eq~~~e~~~~~~~~ 165 (291)
T d1nyra4 118 ELGTMHRYEASGA-VSGLQRVRGMTLNDSHIF-VRPDQIKEEFKRVVNMI 165 (291)
T ss_dssp EEEEEECCCCTTT-CBTTTBCSEEEEEEEEEE-ECGGGHHHHHHHHHHHH
T ss_pred eccceeecCCCcc-cccccceeeeeeeeheee-cCCcccHHHHHHHHHHH
Confidence 9999999997533 21 249999999874 66677777676666543
No 27
>d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]}
Probab=97.22 E-value=0.00027 Score=71.31 Aligned_cols=92 Identities=15% Similarity=0.152 Sum_probs=57.8
Q ss_pred CchHHHhhhCCcEEEcCCccccc------cCCCC----ccceee-ccCCcceeecc--CHHHHHHHh---cccCCcEEEE
Q psy8087 160 GYPPEVSLANGIAKVTPPTLVQT------QVEGG----STLFSL-NFFGEPAYLTQ--SSQLYLETC---LPALGDVYCI 223 (658)
Q Consensus 160 ~~iR~fl~~~gF~EV~TPiL~~~------~~eG~----~~~F~~-~~~~~~~~L~~--Spqlylk~l---i~g~~rvfeI 223 (658)
+.+++.|..+||.||+||++-.. ..+|. .+.|.. +.-|..+.||- .+++-.-.. .....|+|.+
T Consensus 23 ~~l~~~f~~~Gy~~I~tP~~E~~d~~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpD~T~~iaR~~~~~~~~~~~r~~Y~ 102 (318)
T d1z7ma1 23 GRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQEKMFQFIKHEGQSITLRYDFTLPLVRLYSQIKDSTSARYSYF 102 (318)
T ss_dssp HHHHHHHHHTTCEECCCCSEEEHHHHHHHHCSSSCCCTTSCCEEECTTCCEEEECCCSHHHHHHHHHTCCSCCCEEEEEE
T ss_pred HHHHHHHHHcCCEEEECCccchHHHhhccCCCcccccccceeEeecCCccEEEeeccccchHHHHHHHhcccCCcccccc
Confidence 47999999999999999998321 12221 123432 33467888873 234322111 1135689999
Q ss_pred eeeeecCCCCCccCcceeeeeeeEeecCC
Q psy8087 224 AQSYRAENSRTRRHLAEYTHVEAECAFLT 252 (658)
Q Consensus 224 ~~~FR~E~~~~~rHl~EFt~lE~e~a~~d 252 (658)
|+|||+|.... .+..||+|+.+|.-..+
T Consensus 103 g~vfR~~~~~~-~r~rE~~Q~g~EiiG~~ 130 (318)
T d1z7ma1 103 GKIFRKEKRHK-GRSTENYQIGIELFGES 130 (318)
T ss_dssp EECCCCCC--------CCEEEEEEEESSC
T ss_pred cceeEEccccc-cccchhhhhheeccccc
Confidence 99999998644 45679999999988765
No 28
>d1qf6a4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Escherichia coli [TaxId: 562]}
Probab=97.01 E-value=0.0008 Score=67.20 Aligned_cols=112 Identities=13% Similarity=0.091 Sum_probs=77.0
Q ss_pred CchHHHhhhCCcEEEcCCccccccC---CC-----CccceeeccCCcceeeccCHHHHHHHhcc----c---C-CcEEEE
Q psy8087 160 GYPPEVSLANGIAKVTPPTLVQTQV---EG-----GSTLFSLNFFGEPAYLTQSSQLYLETCLP----A---L-GDVYCI 223 (658)
Q Consensus 160 ~~iR~fl~~~gF~EV~TPiL~~~~~---eG-----~~~~F~~~~~~~~~~L~~Spqlylk~li~----g---~-~rvfeI 223 (658)
+.+|+.+.+.||.||.||.|.+... .| +.+.|.+..-+..++|+-..+-..=.+.. + + -|+||+
T Consensus 38 ~~i~e~~~~~G~~eV~~P~L~~~~l~~~sG~~~~~~~~~~~~~~~~~~~~L~Pt~e~~~~~~~~~~~~sy~~LPl~~~q~ 117 (291)
T d1qf6a4 38 VFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEF 117 (291)
T ss_dssp HHHHHHHHHTTCEECCCCSEEETHHHHHHSHHHHHGGGCEEEEETTEEEEECSSSHHHHHHHHTTSCEEGGGCSEEEEEE
T ss_pred HHHHHHHHHcCCEEEEcccccchhHHhhhchhhhccchhccccccchhhcccccCcHHHHHHHHccccchhhcCeeEeec
Confidence 5788899999999999999975421 12 12345445557789999888855544432 2 3 479999
Q ss_pred eeeeecCCCCC---ccCcceeeeeeeEeecCCHHHHHHHHHHHHHHHHHHHhh
Q psy8087 224 AQSYRAENSRT---RRHLAEYTHVEAECAFLTFDDLLDKLEDLICDTVDRVMA 273 (658)
Q Consensus 224 ~~~FR~E~~~~---~rHl~EFt~lE~e~a~~d~~~~m~~~e~li~~i~~~~~~ 273 (658)
++|||+|.... -.=.-||+|-|.+. |..-++.++.++++++.+. .+..
T Consensus 118 ~~~fR~E~~~~~~Gl~R~reF~~~d~h~-f~~~e~~~~e~~~~~~~~~-~i~~ 168 (291)
T d1qf6a4 118 GSCHRNEPSGSLHGLMRVRGFTQDDAHI-FCTEEQIRDEVNGCIRLVY-DMYS 168 (291)
T ss_dssp EEEECCCCGGGCBTTTBCSEEEEEEEEE-EECGGGHHHHHHHHHHHHH-HHHG
T ss_pred ceeeecccccccccccccccceecccee-EecchhhHHHHHHHHHHHH-HHHH
Confidence 99999995321 11246999999999 5666677777777765443 4543
No 29
>d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]}
Probab=96.60 E-value=0.0057 Score=59.55 Aligned_cols=107 Identities=13% Similarity=0.107 Sum_probs=70.7
Q ss_pred CchHHHhhhCCcEEEcCCcccccc-CC--CC-c-----cceeecc-----CCcceeeccCHHH-----HHHHhcc-c-C-
Q psy8087 160 GYPPEVSLANGIAKVTPPTLVQTQ-VE--GG-S-----TLFSLNF-----FGEPAYLTQSSQL-----YLETCLP-A-L- 217 (658)
Q Consensus 160 ~~iR~fl~~~gF~EV~TPiL~~~~-~e--G~-~-----~~F~~~~-----~~~~~~L~~Spql-----ylk~li~-g-~- 217 (658)
+.+++.+.+.||.||.||+|.... .. |. . +.|.... -+.+++|+-+.+- |...... . +
T Consensus 48 ~~~~~~~~~~G~~eV~~P~l~~~~l~~~sg~~~~~~~~~m~~~~~~~~~~~~~~~~L~pt~e~~~~~~~~~~~~s~~~LP 127 (272)
T d1hc7a2 48 QVLDRMFKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLP 127 (272)
T ss_dssp HHHHHHHHHTTCEECBCCSEEESTTC---------CCTTCEEEEEESSSEEEEEEEECSCSHHHHHHHHHHHCCBGGGCC
T ss_pred HHHHHHHHHcCCeEEeeccccchHHhhhcccchhhcccceeeeeccccccccchhhcccccccceeehhhceeccccccc
Confidence 478888999999999999885433 22 21 1 2232221 2346899888774 4444443 1 3
Q ss_pred CcEEEEeeeeecCCCCCc--cCcceeeeeeeEeecCCHHHHHHHHHHHHHHH
Q psy8087 218 GDVYCIAQSYRAENSRTR--RHLAEYTHVEAECAFLTFDDLLDKLEDLICDT 267 (658)
Q Consensus 218 ~rvfeI~~~FR~E~~~~~--rHl~EFt~lE~e~a~~d~~~~m~~~e~li~~i 267 (658)
-|+|++++|||+|.+... | .-+|+|.|.++...+..+.....++++...
T Consensus 128 lr~~~~~~~fR~E~~~~g~~r-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T d1hc7a2 128 QLLNQWGNVVRWEMRTRPFLR-TSEFLWQEGHTAHATREEAEEEVRRMLSIY 178 (272)
T ss_dssp EEEEEEEEEECCCSSCBTTTB-CSEEEEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred eeeeecccccccccccccccc-eEEEEEEhhhhhhcccccchhHHHHHHHHH
Confidence 479999999999965321 2 248999999998888877777666655443
No 30
>d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=96.06 E-value=0.013 Score=58.67 Aligned_cols=90 Identities=16% Similarity=0.138 Sum_probs=61.1
Q ss_pred CchHHHhhhCCcEEEcCCcccccc----CCCC---cccee-eccCCcceeeccCHHHHHH--Hhcc---c--C-CcEEEE
Q psy8087 160 GYPPEVSLANGIAKVTPPTLVQTQ----VEGG---STLFS-LNFFGEPAYLTQSSQLYLE--TCLP---A--L-GDVYCI 223 (658)
Q Consensus 160 ~~iR~fl~~~gF~EV~TPiL~~~~----~eG~---~~~F~-~~~~~~~~~L~~Spqlylk--~li~---g--~-~rvfeI 223 (658)
+.+++.|.+.||.+|+||+|-..+ ..|. .+.|. .+--|..+.|| |++=.+ +.+. . . -|+|.+
T Consensus 26 ~~l~~~f~~~Gy~~I~tP~lE~~d~~~~~~g~~~~~~~~~f~D~~g~~l~LR--pD~T~~iar~~~~~~~~~~p~k~~y~ 103 (327)
T d1wu7a2 26 KTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEELLQQTYSFVDKGGREVTLI--PEATPSTVRMVTSRKDLQRPLRWYSF 103 (327)
T ss_dssp HHHHHHHHHTTCEECBCCSEEETHHHHTTSCTTGGGGSCEEECTTSCEEEEC--SCSHHHHHHHHTTCTTCCSSEEEEEC
T ss_pred HHHHHHHHHcCCeEeECCccchHhhccccCchhHHHHHhhhhcccchhhccc--ccccchhhhHhhhhhhccccceeecc
Confidence 478999999999999999883221 1121 23453 34457788887 333222 2222 1 2 389999
Q ss_pred eeeeecCCCCCccCcceeeeeeeEeecCC
Q psy8087 224 AQSYRAENSRTRRHLAEYTHVEAECAFLT 252 (658)
Q Consensus 224 ~~~FR~E~~~~~rHl~EFt~lE~e~a~~d 252 (658)
|++||.+.... .+.-||+|+.+|.-..+
T Consensus 104 g~VfR~~~~~~-g~~re~~Q~G~EiiG~~ 131 (327)
T d1wu7a2 104 PKVWRYEEPQA-GRYREHYQFNADIFGSD 131 (327)
T ss_dssp CEEECCCCSCS-SCCSEEEEEEEEEESCC
T ss_pred Ccceecccccc-CCcchhhhhhhhhcCCc
Confidence 99999998754 45569999999998875
No 31
>d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]}
Probab=95.78 E-value=0.0071 Score=61.17 Aligned_cols=108 Identities=15% Similarity=0.129 Sum_probs=65.0
Q ss_pred CchHHHh--hhCCcEEEcCCcccccc---CCCCccce-----------------------eec-----cCCcceeec--c
Q psy8087 160 GYPPEVS--LANGIAKVTPPTLVQTQ---VEGGSTLF-----------------------SLN-----FFGEPAYLT--Q 204 (658)
Q Consensus 160 ~~iR~fl--~~~gF~EV~TPiL~~~~---~eG~~~~F-----------------------~~~-----~~~~~~~L~--~ 204 (658)
..+|+.+ .+.|+.||.||+|.+.. ..|.-..| .++ .-+...||+ .
T Consensus 47 ~~wr~~~v~~~~~~~ev~tp~i~~~~lw~~SGH~~~f~d~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~t 126 (331)
T d1b76a2 47 QAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNAKARYWTPPRYFNMMFQDLRGPRGGRGLLAYLRPET 126 (331)
T ss_dssp HHHHHHHTTSCSSEEEEBCCSEEEHHHHHHTSHHHHCEEEECBSSSCBCCCCCEEEECCEEEECSSSCCGGGEEEECSCT
T ss_pred HHHHHHHHhccCCeEEEeccccCChHHhccCccccccCCceeeecccccccCccchhhccccccccccccCCcccccCcc
Confidence 4677765 46799999999996442 11221111 111 113456777 4
Q ss_pred CHHHHHHH---hccc---C-CcEEEEeeeeecCCCCCccC----cceeeeeeeEeecCCHHHHHHHHHHHHHHHHHH
Q psy8087 205 SSQLYLET---CLPA---L-GDVYCIAQSYRAENSRTRRH----LAEYTHVEAECAFLTFDDLLDKLEDLICDTVDR 270 (658)
Q Consensus 205 Spqlylk~---li~g---~-~rvfeI~~~FR~E~~~~~rH----l~EFt~lE~e~a~~d~~~~m~~~e~li~~i~~~ 270 (658)
++..+... +..+ + =|++|||.|||||-+ . +| .=||||.|+|. |.+-++..+.....+..+.+.
T Consensus 127 ~~~~~~~~~~~~~~syk~LP~~~aqig~~fR~E~s-~-~~gl~RvReFtq~D~~~-F~~~~q~~~~~~~~~~~~~~~ 200 (331)
T d1b76a2 127 AQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEIT-P-RNFIFRVREFEQMEIEY-FVRPGEDEYWHRYWVEERLKW 200 (331)
T ss_dssp HHHHHTTHHHHHHHHTCCSSEEEEEEEEEECCCSS-C-CTTTTSCSEEEEEEEEE-EECGGGHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHhHHhccccccchhhhhccceeccccc-c-cccccccchhhhhhhhh-hcCCcchhHHHHHHHHHHHHH
Confidence 44444332 2222 3 369999999999975 4 44 34999999987 566667666655555554443
No 32
>d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]}
Probab=95.58 E-value=0.025 Score=56.43 Aligned_cols=92 Identities=17% Similarity=0.214 Sum_probs=57.2
Q ss_pred CchHHHhhhCCcEEEcCCcccccc----CCCCc------cceee-ccCCcceeeccC--HHHHHHHhccc---C---CcE
Q psy8087 160 GYPPEVSLANGIAKVTPPTLVQTQ----VEGGS------TLFSL-NFFGEPAYLTQS--SQLYLETCLPA---L---GDV 220 (658)
Q Consensus 160 ~~iR~fl~~~gF~EV~TPiL~~~~----~eG~~------~~F~~-~~~~~~~~L~~S--pqlylk~li~g---~---~rv 220 (658)
+.+++.|...||.||+||+|-... ..|.. ..|.. +.-|+.+.||-- +++..-.+..+ . -|.
T Consensus 24 ~~l~~~f~~~Gy~~I~tP~lE~~d~l~~~~g~~~~~~~~~~~~~~d~~g~~l~LRpD~T~~iar~~~~~~~~~~~~p~r~ 103 (324)
T d1h4vb2 24 ATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGTAAMVRAYLEHGMKVWPQPVRL 103 (324)
T ss_dssp HHHHHHHHHTTCEECCCCSEEEGGGGCCCSCC------CCSCEEECTTSCEEEECCCSHHHHHHHHHHTTGGGSSSSEEE
T ss_pred HHHHHHHHHcCCeEeeCCccccHHHhhcccCCchhHHHHHHhhhhccCCcccccccccccHHHHHHHHhhhhhhchhhhh
Confidence 578899999999999999983221 11221 22322 334677888732 22222111112 2 389
Q ss_pred EEEeeeeecCCCCCccCcceeeeeeeEeecCC
Q psy8087 221 YCIAQSYRAENSRTRRHLAEYTHVEAECAFLT 252 (658)
Q Consensus 221 feI~~~FR~E~~~~~rHl~EFt~lE~e~a~~d 252 (658)
|.+|++||.+.....| .-||+|+.+|.-..+
T Consensus 104 ~Y~g~VfR~~~~~~gr-~re~~Q~g~EiiG~~ 134 (324)
T d1h4vb2 104 WMAGPMFRAERPQKGR-YRQFHQVNYEALGSE 134 (324)
T ss_dssp EEEEEEECCCCC-----CCEEEEEEEEEESCC
T ss_pred eeeCcccccCcccCCC-cceeccccccccCCC
Confidence 9999999999875433 469999999987763
No 33
>d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=95.44 E-value=0.042 Score=54.75 Aligned_cols=106 Identities=14% Similarity=0.239 Sum_probs=71.9
Q ss_pred CchHHHhhhCCcEEEcCCccccccC-CCCc-------cceeeccCCcceeeccCHHHHHHHhccc-------C-CcEEEE
Q psy8087 160 GYPPEVSLANGIAKVTPPTLVQTQV-EGGS-------TLFSLNFFGEPAYLTQSSQLYLETCLPA-------L-GDVYCI 223 (658)
Q Consensus 160 ~~iR~fl~~~gF~EV~TPiL~~~~~-eG~~-------~~F~~~~~~~~~~L~~Spqlylk~li~g-------~-~rvfeI 223 (658)
+.+.+++.++||.||.||.|..... +|.+ +.|.+ -+.++||.-..|.-+=.+... + -|++++
T Consensus 64 ~~~ld~~~~~gy~~v~~P~lv~~~~~~~~G~~p~f~~~~y~~--~~~~~~LipTsE~~l~~~~~~~i~~~~~LPlr~~~~ 141 (311)
T d1seta2 64 RFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAI--AETDLYLTGTAEVVLNALHSGEILPYEALPLRYAGY 141 (311)
T ss_dssp HHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTTGGGSCBB--TTSSEEECSSTHHHHHHTTTTCEEEGGGCSEEEEEE
T ss_pred HHHHHhhhcccceEEeechhhccchhhhcccccccccccccc--cccceeecccccchhhhhhhhhhhhhhhccceEEee
Confidence 4677788899999999999975432 2211 12322 245789997777765544331 2 279999
Q ss_pred eeeeecCCCCC------ccCcceeeeeeeEeec-CCHHHHHHHHHHHHHHH
Q psy8087 224 AQSYRAENSRT------RRHLAEYTHVEAECAF-LTFDDLLDKLEDLICDT 267 (658)
Q Consensus 224 ~~~FR~E~~~~------~rHl~EFt~lE~e~a~-~d~~~~m~~~e~li~~i 267 (658)
++|||.|.... --...+|+.+|....- .+.++..+..++++...
T Consensus 142 s~cfR~Eag~~g~~trGL~RvhQF~kvE~~~~~~~~~e~s~~~~~~~~~~~ 192 (311)
T d1seta2 142 APAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENA 192 (311)
T ss_dssp EEEECCCCSCTTSSCSTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHH
T ss_pred cccchhhhccccccchhhhhhcccchhhhheeeccccccchhHHHHHHHHH
Confidence 99999996321 1134599999987553 36888888888887654
No 34
>d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]}
Probab=95.42 E-value=0.035 Score=54.09 Aligned_cols=104 Identities=17% Similarity=0.217 Sum_probs=66.7
Q ss_pred CchHHHhhhCCcEEEcCCccccccC---CCC------ccceeeccCC-----cceeeccCHHHHHHHhcc----c---C-
Q psy8087 160 GYPPEVSLANGIAKVTPPTLVQTQV---EGG------STLFSLNFFG-----EPAYLTQSSQLYLETCLP----A---L- 217 (658)
Q Consensus 160 ~~iR~fl~~~gF~EV~TPiL~~~~~---eG~------~~~F~~~~~~-----~~~~L~~Spqlylk~li~----g---~- 217 (658)
..+|+.+.+.||.||.||.|.+... .|+ .+.|...+-| .+++|+-..+-..=.+.. + +
T Consensus 43 ~~i~~~~~~~G~~ev~~P~l~~~~l~~ks~~~~~~~~~~~~~~~~~~~~~~~~~~~L~P~~~~~~~~i~~~~~~Syr~LP 122 (268)
T d1nj8a3 43 EIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTDLP 122 (268)
T ss_dssp HHHHHHHHHTTCEECBCCSEEEHHHHHHHCSSSGGGGGGCEEEEESSSSEEEEEEEECSSSHHHHHHHHHTTCCBTTSCC
T ss_pred HHHHHHHHHcCCeEEeehhhhhhHhhhccCCCccccccceeEEeccccccchhhhhcccCCCchhHHhhhhhccchhhhh
Confidence 4788889999999999999853211 122 1234333322 358998777655444332 1 2
Q ss_pred CcEEEEeeeeecCCCCCccC----cceeeeee-eEeecCCHHHHHHHHHHHHH
Q psy8087 218 GDVYCIAQSYRAENSRTRRH----LAEYTHVE-AECAFLTFDDLLDKLEDLIC 265 (658)
Q Consensus 218 ~rvfeI~~~FR~E~~~~~rH----l~EFt~lE-~e~a~~d~~~~m~~~e~li~ 265 (658)
=|+||+|+|||+|.. . +| .-||++.| .+....+-++..+..+.++.
T Consensus 123 ~r~~e~~~~fR~E~~-~-~~GllR~reF~~~dd~~~~~~~~~~~~~~~~~~~~ 173 (268)
T d1nj8a3 123 IKIYQIVNTFRYETK-H-TRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAIS 173 (268)
T ss_dssp CCEEEEECCBCCCCS-C-CBTTTBCSBCSCEEEEEEEESSHHHHHHHHHHHHH
T ss_pred eEEeecccccccccc-c-cccceeEEEEeeechhceeccccchhhHHHHHHHH
Confidence 479999999999943 2 22 34997554 56666687777766666553
No 35
>d1nnxa_ b.40.10.1 (A:) Hypothetical protein YgiW {Escherichia coli [TaxId: 562]}
Probab=94.87 E-value=0.095 Score=43.53 Aligned_cols=73 Identities=19% Similarity=0.225 Sum_probs=56.0
Q ss_pred ccCCcEEEEEEEEEeeecCCCceEEEEEEeCCEEEEEEEcCCccchHHh-ccCCCCcEEEEEEEEEecCCCCCCCCceEE
Q psy8087 509 KYRDKRVTIFGWVHRLRRQGKGLMFVTLRDGSGFIQCVLADILCQTEHA-LLLSTESSVQFRGRIEKVPEGKSAPGGHEL 587 (658)
Q Consensus 509 ~~~g~~V~v~GwI~~~R~~Gkkl~Fi~Lrd~~~~iQvv~~~~~~~~~~~-~~L~~gs~V~V~G~v~~~~~~~~~~g~~El 587 (658)
...+..|+|.|.|.+.-..-+ +.++|++|.|+|-++.+. |. ..+++++-|.|.|.+-+. -+..||
T Consensus 33 ~~Ddt~V~L~G~Iv~~l~~d~----Y~F~D~TG~I~VeId~~~----w~g~~v~p~~kV~i~GevDk~------~~~~eI 98 (106)
T d1nnxa_ 33 LRDDTWVTLRGNIVERISDDL----YVFKDASGTINVDIDHKR----WNGVTVTPKDTVEIQGEVDKD------WNSVEI 98 (106)
T ss_dssp SCSSEEEEEEEEEEEEEETTE----EEEEETTEEEEEECCGGG----STTCCCCTTSCEEEEEEEEEE------TTEEEE
T ss_pred CcCCCeEEEEEEEEEEeCCce----EEEECCCCcEEEEEChhh----cCCcccCCCCEEEEEEEEcCC------CCceEE
Confidence 345778999999988755432 677999999999987532 22 369999999999999542 245799
Q ss_pred EEEEEEEE
Q psy8087 588 KVDYWEVV 595 (658)
Q Consensus 588 ~~~~i~vl 595 (658)
.|+.|++|
T Consensus 99 dV~~I~~l 106 (106)
T d1nnxa_ 99 DVKQIRKV 106 (106)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEC
Confidence 99999875
No 36
>d2pi2a1 b.40.4.3 (A:44-171) Replication protein A 32 KDa subunit (RPA32) fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.82 E-value=0.099 Score=44.91 Aligned_cols=78 Identities=12% Similarity=0.090 Sum_probs=56.3
Q ss_pred cEEEEEEEEEeeecCCCceEEEEEEeCCE-EEEEEEcCCccc-hHHhccCCCCcEEEEEEEEEecCCCCCCCCceEEEEE
Q psy8087 513 KRVTIFGWVHRLRRQGKGLMFVTLRDGSG-FIQCVLADILCQ-TEHALLLSTESSVQFRGRIEKVPEGKSAPGGHELKVD 590 (658)
Q Consensus 513 ~~V~v~GwI~~~R~~Gkkl~Fi~Lrd~~~-~iQvv~~~~~~~-~~~~~~L~~gs~V~V~G~v~~~~~~~~~~g~~El~~~ 590 (658)
..|+|-|+|.++.....+ .-+.|-|++| .|.|..-.+... ......+..|+.|.|.|.++.- .|...|.+.
T Consensus 29 ~~V~iVG~V~~i~~~~t~-~~y~idDgTG~~i~v~~w~~~~~~~~~~~~i~~g~yVrV~G~lk~f------~~~~~i~~~ 101 (128)
T d2pi2a1 29 SQVTIVGIIRHAEKAPTN-IVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSF------QNKKSLVAF 101 (128)
T ss_dssp SEEEEEEEEEEEEECSSE-EEEEEECSSSSCEEEEEECC-------CCCCCTTCEEEEEEEEEEE------TTEEEEEEE
T ss_pred EEEEEEEEEEEEEecCCE-EEEEEECCCCCcEEEEEECCCCCCccccccccCCCEEEEEEEEEee------CCeEEEEEE
Confidence 468999999999888754 4569999999 588887543222 2334579999999999999643 356678888
Q ss_pred EEEEEec
Q psy8087 591 YWEVVGL 597 (658)
Q Consensus 591 ~i~vls~ 597 (658)
.+..+..
T Consensus 102 ~i~~v~d 108 (128)
T d2pi2a1 102 KIMPLED 108 (128)
T ss_dssp EEEECSC
T ss_pred EEEEeCC
Confidence 8876554
No 37
>d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]}
Probab=93.75 E-value=0.075 Score=51.32 Aligned_cols=102 Identities=17% Similarity=0.195 Sum_probs=61.9
Q ss_pred CchHHHhhhCCcEEEcCCcccccc-C--CCC------ccceeeccC-----CcceeeccCHHHHHHHhcc----c---C-
Q psy8087 160 GYPPEVSLANGIAKVTPPTLVQTQ-V--EGG------STLFSLNFF-----GEPAYLTQSSQLYLETCLP----A---L- 217 (658)
Q Consensus 160 ~~iR~fl~~~gF~EV~TPiL~~~~-~--eG~------~~~F~~~~~-----~~~~~L~~Spqlylk~li~----g---~- 217 (658)
..+|+.+ ++||.||.||.|.... . .+| .+.|.+..- +.+++|+-+.+-..=.+.. + +
T Consensus 41 ~~~~~~~-~~G~~ev~~P~l~~~~~l~~~sgh~~~~~~e~f~~~~~~~~~~~~~~~L~pt~~~~~~~~~~~~~~SyrdLP 119 (265)
T d1nj1a3 41 KILRRIL-DRDHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLSKLQRKLALRPTSETVMYPMFALWVRSHTDLP 119 (265)
T ss_dssp HHHHHHH-TTTCEECCCCSEEEHHHHTTSHHHHHHTTTTCCEEEEETTEEEEEEEEECSSSHHHHHHHHHHHCCBTTTCC
T ss_pred HHHHHHH-HhcCceehhhhhhhhhhhhhcccccccccccceeeeccCccccceeEEeecccccceEEeeeeeeccccccc
Confidence 3677765 5699999999875332 1 111 234544322 3468998877655443332 2 3
Q ss_pred CcEEEEeeeeecCCCCCccC----cceeeee-eeEeecCCHHHHHHHHHHHH
Q psy8087 218 GDVYCIAQSYRAENSRTRRH----LAEYTHV-EAECAFLTFDDLLDKLEDLI 264 (658)
Q Consensus 218 ~rvfeI~~~FR~E~~~~~rH----l~EFt~l-E~e~a~~d~~~~m~~~e~li 264 (658)
=|+||+|+|||+|.. . +| .=|||++ +.+....+-++.....+.++
T Consensus 120 lr~~q~~~~fR~E~~-~-~~Gl~R~reF~~~~d~~~~~~~~~~~~~e~~~~~ 169 (265)
T d1nj1a3 120 MRFYQVVNTFRYETK-H-TRPLIRVREITTFKEAHTIHATASEAEEQVERAV 169 (265)
T ss_dssp EEEEEEEEEECCCCS-C-CBTTTBCSEEEEEEEEEEEESSHHHHHHHHHHHH
T ss_pred eEEEeeccceeeecc-c-CcCCEEEEEEEEeccceeecCCHHHHHHHhhhhH
Confidence 379999999999943 2 22 3499865 45555567666655554444
No 38
>d1usya_ d.104.1.1 (A:) ATP phosphoribosyltransferase regulatory subunit HisZ {Thermotoga maritima [TaxId: 2336]}
Probab=93.71 E-value=0.091 Score=51.09 Aligned_cols=82 Identities=15% Similarity=0.095 Sum_probs=53.6
Q ss_pred hHHHhhhCCcEEEcCCccccccCCCCccceeeccCCcceeeccCHHHHHH--Hhcc--cC---CcEEEEeeeeecCCCCC
Q psy8087 162 PPEVSLANGIAKVTPPTLVQTQVEGGSTLFSLNFFGEPAYLTQSSQLYLE--TCLP--AL---GDVYCIAQSYRAENSRT 234 (658)
Q Consensus 162 iR~fl~~~gF~EV~TPiL~~~~~eG~~~~F~~~~~~~~~~L~~Spqlylk--~li~--g~---~rvfeI~~~FR~E~~~~ 234 (658)
+++-..++||-||.||+|-...... ...| .+--|+.+.|| |++=.+ ++++ .. -|+|.+|+|||.++.
T Consensus 12 f~~~~~~~Gy~~i~tP~~E~~e~~~-~~~F-~D~~g~~l~LR--pD~T~~iaR~~~~~~~~~p~k~~Y~g~VfR~~~~-- 85 (275)
T d1usya_ 12 FYSKATKKGFSPFFVPALEKAEEPA-GNFF-LDRKGNLFSIR--EDFTKTVLNHRKRYSPDSQIKVWYADFVYRYSGS-- 85 (275)
T ss_dssp HHHHHHHTTCEECCCCSEEECSSCC-SSCE-EETTSCEEEEC--CCHHHHHHHHHTTCTTCCCEEEECCEEEEEEETT--
T ss_pred HHHHHHHcCCceeecCccccccccc-ccee-EcCCCCEEEEC--CCCcHHHHHHHHHcCCCCCeeeeEEeeEEEeCCC--
Confidence 3444458999999999996443222 2233 34447778887 333333 2222 22 289999999998764
Q ss_pred ccCcceeeeeeeEeecC
Q psy8087 235 RRHLAEYTHVEAECAFL 251 (658)
Q Consensus 235 ~rHl~EFt~lE~e~a~~ 251 (658)
+.-||+|+.+|.-..
T Consensus 86 --~~re~~Q~G~EiiG~ 100 (275)
T d1usya_ 86 --DLVAEYQLGLEKVPR 100 (275)
T ss_dssp --EEEEEEEEEEEEESC
T ss_pred --cccceeecCceeech
Confidence 345999999998765
No 39
>d1jmca1 b.40.4.3 (A:183-298) Replication protein A 70 KDa subunit (RPA70) {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.04 E-value=0.096 Score=44.13 Aligned_cols=95 Identities=17% Similarity=0.130 Sum_probs=63.5
Q ss_pred ecccCCccCCcEEEEEEEEEee---e---cC-CC-ceEEEEEEeCCEEEEEEEcCCccchHHhccCCCCcEEEEEEE-EE
Q psy8087 503 KIKDGEKYRDKRVTIFGWVHRL---R---RQ-GK-GLMFVTLRDGSGFIQCVLADILCQTEHALLLSTESSVQFRGR-IE 573 (658)
Q Consensus 503 ~i~~~~~~~g~~V~v~GwI~~~---R---~~-Gk-kl~Fi~Lrd~~~~iQvv~~~~~~~~~~~~~L~~gs~V~V~G~-v~ 573 (658)
.|+++.. ....++|.|||.++ | .. |. ++.-++|.|.+|.|++++-.+.. ......|..|++..++|. |.
T Consensus 4 PI~~L~p-~~~~~~I~~RV~~k~~~r~f~~~~~~g~v~~~~l~De~G~I~~t~~~~~~-~~f~~~l~~G~vy~i~~~~V~ 81 (116)
T d1jmca1 4 PIASLTP-YQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNEQV-DKFFPLIEVNKVYYFSKGTLK 81 (116)
T ss_dssp CGGGCCT-TCCCCEEEEEEEEECCCEEEECSSCEEEEEEEEEECSSCEEEEEEEHHHH-HHHGGGCCTTCEEEEECCEEE
T ss_pred eHHHcCC-CCCCEEEEEEEEEeccceEEECCCCCceEEEEEEEcCCCCEEEEEchhhh-hhhHhhcccCCEEEEcceEEE
Confidence 3555443 23458899999754 2 22 11 57788999999999999975332 133457999999999964 44
Q ss_pred ecCCC-CCCCCceEEEEEEEEEEecCC
Q psy8087 574 KVPEG-KSAPGGHELKVDYWEVVGLAP 599 (658)
Q Consensus 574 ~~~~~-~~~~g~~El~~~~i~vls~~~ 599 (658)
..... +...+.+||.....+.+.+|+
T Consensus 82 ~~~~~y~~~~~~yei~f~~~T~I~~~~ 108 (116)
T d1jmca1 82 IANKQFTAVKNDYEMTFNNETSVMPCE 108 (116)
T ss_dssp ECCGGGCCCCCSEEEECCTTCEEEECC
T ss_pred EccCcEeccCCcEEEEECCCcEEEECC
Confidence 33211 233578999998777777774
No 40
>d2pi2e1 b.40.4.3 (E:3-117) Replication protein A 14 KDa (RPA14) subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.65 E-value=0.38 Score=40.39 Aligned_cols=77 Identities=19% Similarity=0.212 Sum_probs=56.5
Q ss_pred eecccCCccCCcEEEEEEEEEeeecCCCceEEEEEEeCC-EEEEEEEcCCccchHHhccCCCCcEEEEEEEEEecCCCCC
Q psy8087 502 IKIKDGEKYRDKRVTIFGWVHRLRRQGKGLMFVTLRDGS-GFIQCVLADILCQTEHALLLSTESSVQFRGRIEKVPEGKS 580 (658)
Q Consensus 502 ~~i~~~~~~~g~~V~v~GwI~~~R~~Gkkl~Fi~Lrd~~-~~iQvv~~~~~~~~~~~~~L~~gs~V~V~G~v~~~~~~~~ 580 (658)
+.-.-+..+.|+.|++-|+|.+++..|+ -+++++.. +.++|.++... ....+.+|.|.|++
T Consensus 10 Vn~~~L~~~~Gk~V~ivGkV~~v~~~g~---~~~~~s~D~~~V~v~l~~~~-------~~~~~~~vEViG~V-------- 71 (115)
T d2pi2e1 10 INAGMLAQFIDKPVCFVGRLEKIHPTGK---MFILSDGEGKNGTIELMEPL-------DEEISGIVEVVGRV-------- 71 (115)
T ss_dssp ECGGGGGGSTTCEEEEEEEEEEECTTSS---EEEEECTTSCEEEEECSSCC-------SSCCCSEEEEEEEE--------
T ss_pred ECHHHHHhhCCCeEEEEEEEEEEcCCCC---EEEEEcCCCCEEEEEeCCCC-------CCccCCeEEEEEEE--------
Confidence 3333457789999999999999998875 34566644 46888877532 24678899999999
Q ss_pred CCCceEEEEEEEEEEec
Q psy8087 581 APGGHELKVDYWEVVGL 597 (658)
Q Consensus 581 ~~g~~El~~~~i~vls~ 597 (658)
.+..+|.+..+.-++.
T Consensus 72 -~~~~sI~~~~~~~fg~ 87 (115)
T d2pi2e1 72 -TAKATILCTSYVQFKE 87 (115)
T ss_dssp -CTTSCEEEEEEEECCC
T ss_pred -CCCCcEEEEEEEEcCC
Confidence 3455688888876653
No 41
>d1o7ia_ b.40.4.3 (A:) Archaeal ssDNA-binding protein {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=91.89 E-value=0.59 Score=38.93 Aligned_cols=85 Identities=16% Similarity=0.130 Sum_probs=57.6
Q ss_pred ecccCCccCCcEEEEEEEEEee---ecC----C-CceEEEEEEeCCEEEEEEEcCCccchHHhccCCCCcEEEEEEEEEe
Q psy8087 503 KIKDGEKYRDKRVTIFGWVHRL---RRQ----G-KGLMFVTLRDGSGFIQCVLADILCQTEHALLLSTESSVQFRGRIEK 574 (658)
Q Consensus 503 ~i~~~~~~~g~~V~v~GwI~~~---R~~----G-kkl~Fi~Lrd~~~~iQvv~~~~~~~~~~~~~L~~gs~V~V~G~v~~ 574 (658)
+|+++.. -...|+|.|+|.++ |.. | .++..+.|.|++|.|.+++=.+ .+..|..||+|.++|--.+
T Consensus 4 kI~dL~p-g~~~v~i~~~V~~~~~~r~~~~~~g~~~v~~~~i~DeTG~i~~~~W~~-----~~~~l~~Gdvv~i~na~v~ 77 (115)
T d1o7ia_ 4 KVGNLKP-NMESVNVTVRVLEASEARQIQTKNGVRTISEAIVGDETGRVKLTLWGK-----HAGSIKEGQVVKIENAWTT 77 (115)
T ss_dssp CGGGCCT-TCSSEEEEEEEEEECCCEEECCTTCCEEEEEEEEEETTEEEEEEEEGG-----GTTCCCTTCEEEEEEEEEE
T ss_pred cHHHCCC-CCCCEEEEEEEEECCCCceeecCCCCEEEEEEEEEcCCCeEEEEEecc-----ccccCCCCCEEEEeeEEEE
Confidence 4555433 22358999999886 331 2 2678899999999999888542 2346899999999855443
Q ss_pred cCCCCCCCCceEEEEEEEEEEecC
Q psy8087 575 VPEGKSAPGGHELKVDYWEVVGLA 598 (658)
Q Consensus 575 ~~~~~~~~g~~El~~~~i~vls~~ 598 (658)
.- .|.++|.+.+...+..+
T Consensus 78 ~~-----~g~~el~~~~~s~i~~~ 96 (115)
T d1o7ia_ 78 AF-----KGQVQLNAGSKTKIAEA 96 (115)
T ss_dssp EE-----TTEEEEEECTTCEEEEC
T ss_pred EE-----CCeEEEEECCCeEEEEC
Confidence 22 57899998664444443
No 42
>d2pi2a1 b.40.4.3 (A:44-171) Replication protein A 32 KDa subunit (RPA32) fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.39 E-value=0.23 Score=42.39 Aligned_cols=66 Identities=11% Similarity=0.140 Sum_probs=48.1
Q ss_pred CCcEEEEeEEeecceecCCCeEEEEEEcCCe-EEEEEEecccch-hhhhhcCCCccEEEEEEEeEeCCC
Q psy8087 69 IITNINIPAIPGPPAIPGKGLMFVTLRDGSG-FIQCVLADILCQ-TEHALLLSTESSVQFRGRIEKVPE 135 (658)
Q Consensus 69 ~~~~v~~~Grv~~~r~~gk~l~Fi~LrD~~~-~iQvv~~~~~~~-~~~~~~l~~es~V~v~G~l~~~p~ 135 (658)
.-..|++.|+|.++......+.| .|-|++| .|.|..-.+... ......+..|+.|.|.|.++.-.+
T Consensus 27 ~v~~V~iVG~V~~i~~~~t~~~y-~idDgTG~~i~v~~w~~~~~~~~~~~~i~~g~yVrV~G~lk~f~~ 94 (128)
T d2pi2a1 27 EISQVTIVGIIRHAEKAPTNIVY-KIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQN 94 (128)
T ss_dssp EESEEEEEEEEEEEEECSSEEEE-EEECSSSSCEEEEEECC-------CCCCCTTCEEEEEEEEEEETT
T ss_pred EEEEEEEEEEEEEEEecCCEEEE-EEECCCCCcEEEEEECCCCCCccccccccCCCEEEEEEEEEeeCC
Confidence 34679999999999988877666 9999999 488876533211 112246889999999999986543
No 43
>d1nnxa_ b.40.10.1 (A:) Hypothetical protein YgiW {Escherichia coli [TaxId: 562]}
Probab=89.36 E-value=0.28 Score=40.55 Aligned_cols=59 Identities=14% Similarity=0.184 Sum_probs=46.3
Q ss_pred cCCcEEEEeEEeecceecCCCeEEEEEEcCCeEEEEEEecccchhhhhhcCCCccEEEEEEEeEeC
Q psy8087 68 YIITNINIPAIPGPPAIPGKGLMFVTLRDGSGFIQCVLADILCQTEHALLLSTESSVQFRGRIEKV 133 (658)
Q Consensus 68 ~~~~~v~~~Grv~~~r~~gk~l~Fi~LrD~~~~iQvv~~~~~~~~~~~~~l~~es~V~v~G~l~~~ 133 (658)
..+..|+|.|.|.+..+.- .| .++|++|.|+|-++.+. |.-..+++++-|.+.|.+-+-
T Consensus 34 ~Ddt~V~L~G~Iv~~l~~d---~Y-~F~D~TG~I~VeId~~~---w~g~~v~p~~kV~i~GevDk~ 92 (106)
T d1nnxa_ 34 RDDTWVTLRGNIVERISDD---LY-VFKDASGTINVDIDHKR---WNGVTVTPKDTVEIQGEVDKD 92 (106)
T ss_dssp CSSEEEEEEEEEEEEEETT---EE-EEEETTEEEEEECCGGG---STTCCCCTTSCEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEEeCCc---eE-EEECCCCcEEEEEChhh---cCCcccCCCCEEEEEEEEcCC
Confidence 4567899999999866543 34 56999999999997654 333479999999999999753
No 44
>d1v1qa_ b.40.4.3 (A:) Primosomal replication protein N, PriB {Escherichia coli [TaxId: 562]}
Probab=88.40 E-value=3.3 Score=33.92 Aligned_cols=84 Identities=15% Similarity=0.129 Sum_probs=52.9
Q ss_pred cEEEEEEEEEe---eec--CCCceEEEEEEe------CCE------EEEEEEcCCccchHHhccCCCCcEEEEEEEEEec
Q psy8087 513 KRVTIFGWVHR---LRR--QGKGLMFVTLRD------GSG------FIQCVLADILCQTEHALLLSTESSVQFRGRIEKV 575 (658)
Q Consensus 513 ~~V~v~GwI~~---~R~--~Gkkl~Fi~Lrd------~~~------~iQvv~~~~~~~~~~~~~L~~gs~V~V~G~v~~~ 575 (658)
..|.|.|+|.+ +|- .|..++-+.|-- .+. .+.|++-+.... .....|+.||.|.|+|.+...
T Consensus 7 N~v~L~G~l~~dpelr~T~~G~~v~~f~la~~~~~~e~~~~r~~~~~i~vv~~g~~Ae-~~~~~l~kG~~v~v~G~L~~~ 85 (111)
T d1v1qa_ 7 NRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ-AITHSITVGSRITVQGFISCH 85 (111)
T ss_dssp EEEEEEEEEEEEEEEEECTTCCEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESTGGG-GGGTTCCTTCEEEEEEEEEEE
T ss_pred EEEEEEEEecCCcceEECCCCCEEEEEEEEeccEEecccceEEEEEEEEEEEeCHHHH-HHHHHhcCCCEEEEEEEEEEe
Confidence 46788888875 353 444444444421 111 255555543221 234579999999999999875
Q ss_pred CCCCCCCCceEEEEEEEEEEecC
Q psy8087 576 PEGKSAPGGHELKVDYWEVVGLA 598 (658)
Q Consensus 576 ~~~~~~~g~~El~~~~i~vls~~ 598 (658)
. -+.+.+.+.|+++.++.|..-
T Consensus 86 ~-~~~~~~r~v~~a~~ie~l~s~ 107 (111)
T d1v1qa_ 86 K-AKNGLSKMVLHAEQIELIDSV 107 (111)
T ss_dssp C-TTTTSCEEEEEEEEEEETTSC
T ss_pred c-ccCCCCEEEEEEEEEEEecCC
Confidence 4 234456788999999988643
No 45
>d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.88 E-value=0.29 Score=47.88 Aligned_cols=70 Identities=13% Similarity=0.066 Sum_probs=42.0
Q ss_pred Ccceeecc--CHHHHHH--Hhc-cc---C-CcEEEEeeeeecCCCC-CccC----cceeeeeeeEeecCCHHHHHHHHHH
Q psy8087 197 GEPAYLTQ--SSQLYLE--TCL-PA---L-GDVYCIAQSYRAENSR-TRRH----LAEYTHVEAECAFLTFDDLLDKLED 262 (658)
Q Consensus 197 ~~~~~L~~--Spqlylk--~li-~g---~-~rvfeI~~~FR~E~~~-~~rH----l~EFt~lE~e~a~~d~~~~m~~~e~ 262 (658)
+..+|||- +|-.+.. .+. .. + =++-|||+|||+|... +.+| .=||||+|++. |.+-++..+..+.
T Consensus 110 ~~~~yLRPetaqg~~~~fkn~~~~~~~~LPf~iaq~g~~fR~E~~~~~~~~gl~RvReF~q~E~~~-F~~pe~~~~~~~~ 188 (290)
T d1g5ha2 110 KTSGKLRATLLHGALEHYVNCLDLVNRKLPFGLAQIGVCFHPVSNSNQTPSSVTRVGEKTEASLVW-FTPTRTSSQWLDF 188 (290)
T ss_dssp HHSCEECSCSHHHHHHTHHHHHHHTTTBSCEEEEEEEEEEEEEC---------CEEEEEEEEEEEE-EECHHHHHHHHHH
T ss_pred cccceeccccchhHHHHHHHHHhhccCCCCcEEEEeccccccccccCCcccccceeeEeEeeeeEE-EeCCcchHHHHHH
Confidence 44578874 4444433 122 12 3 3699999999966321 1121 23999999987 6788887776666
Q ss_pred HHHHH
Q psy8087 263 LICDT 267 (658)
Q Consensus 263 li~~i 267 (658)
++...
T Consensus 189 ~~~~~ 193 (290)
T d1g5ha2 189 WLRHR 193 (290)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
No 46
>d1gm5a2 b.40.4.9 (A:106-285) RecG "wedge" domain {Thermotoga maritima [TaxId: 2336]}
Probab=85.61 E-value=0.62 Score=41.75 Aligned_cols=65 Identities=11% Similarity=-0.004 Sum_probs=44.8
Q ss_pred cCCcEEEEeEEeeccee---cCCCeEEEEEEcCCeEEEEEEecccchhhhhhcCCCccEEEEEEEeEeC
Q psy8087 68 YIITNINIPAIPGPPAI---PGKGLMFVTLRDGSGFIQCVLADILCQTEHALLLSTESSVQFRGRIEKV 133 (658)
Q Consensus 68 ~~~~~v~~~Grv~~~r~---~gk~l~Fi~LrD~~~~iQvv~~~~~~~~~~~~~l~~es~V~v~G~l~~~ 133 (658)
..|+.|+|.|+|.+.+. .++.+.-+.+.|++|.|.+++-....- ........|..|.|+|.+...
T Consensus 58 ~~g~~vti~g~V~~~~~~~~~~~~~~~~~v~D~~g~i~l~fFn~~~~-~~~~k~~~G~~v~v~Gkvk~~ 125 (180)
T d1gm5a2 58 LPGEKVTTQGKIVSVETKKFQNMNILTAVLSDGLVHVPLKWFNQDYL-QTYLKQLTGKEVFVTGTVKSN 125 (180)
T ss_dssp CSSCCCEEEECCCCCEEEECSSCEEEEEEECCSSCCEEEEECSCCTT-HHHHHTTCSSCEEEEEEECSC
T ss_pred CcceeeeeeeEEEeeccccccccceeEEEEEeccceEEEEEeCcHHH-HHHHhhhcCceEEEEEEEeec
Confidence 45678999999986532 233456688899999999987754211 111123479999999999754
No 47
>d3ulla_ b.40.4.3 (A:) ssDNA-binding protein {Human (Homo sapiens), mitochondria [TaxId: 9606]}
Probab=83.62 E-value=3.6 Score=33.63 Aligned_cols=82 Identities=16% Similarity=0.196 Sum_probs=47.7
Q ss_pred EEEEEEEEEe---eec--CCCceEEEEEE-e-----C-------------CEEEEEEEcCCccchHHhccCCCCcEEEEE
Q psy8087 514 RVTIFGWVHR---LRR--QGKGLMFVTLR-D-----G-------------SGFIQCVLADILCQTEHALLLSTESSVQFR 569 (658)
Q Consensus 514 ~V~v~GwI~~---~R~--~Gkkl~Fi~Lr-d-----~-------------~~~iQvv~~~~~~~~~~~~~L~~gs~V~V~ 569 (658)
.|+|.|+|.+ +|. .|+.++-+.|- + . +.-+.|++-.........+.|+.||.|.|+
T Consensus 7 ~V~L~G~l~~dpe~r~t~~G~~v~~f~vAv~~~~~~~~~~~~~~g~~~~~t~w~~v~~~g~~~a~~~~~~l~KG~~V~V~ 86 (115)
T d3ulla_ 7 RVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRISVFRPGLRDVAYQYVKKGSRIYLE 86 (115)
T ss_dssp EEEEEEEECSCCEEECCTTSCCEEEEEEEEEEEECC---------CCEEEEEEEEEEECSTTHHHHHHHHCCTTCEEEEE
T ss_pred EEEEEEECCCCCEEEEeCCCCEEEEEEEEcccccccccccccccccceeeeeeeeeeeeecccchhhhhhccCCCEEEEE
Confidence 5888999975 553 45555544441 1 1 122555554432111112359999999999
Q ss_pred EEEEecC-CCC--CCCCceEEEEEEEEEE
Q psy8087 570 GRIEKVP-EGK--SAPGGHELKVDYWEVV 595 (658)
Q Consensus 570 G~v~~~~-~~~--~~~g~~El~~~~i~vl 595 (658)
|.+.... +.+ .+...+||.|+++++|
T Consensus 87 Grl~~~~~~dkdG~~r~~~~v~a~~i~~L 115 (115)
T d3ulla_ 87 GKIDYGEYMDKNNVRRQATTIIADNIIFL 115 (115)
T ss_dssp EEEECCCEESSSSEECCCEEEEEEEEECC
T ss_pred EEEeeeeEECCCCCEEEEEEEEEEEEEeC
Confidence 9997643 111 1124589999998764
No 48
>d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]}
Probab=83.20 E-value=0.83 Score=46.19 Aligned_cols=34 Identities=24% Similarity=0.447 Sum_probs=26.0
Q ss_pred EEEEeeeeecCCCCCccC----cceeeeeeeEeecCCHHHH
Q psy8087 220 VYCIAQSYRAENSRTRRH----LAEYTHVEAECAFLTFDDL 256 (658)
Q Consensus 220 vfeI~~~FR~E~~~~~rH----l~EFt~lE~e~a~~d~~~~ 256 (658)
+.|||++||||=+ . |+ .-||||+|+|. |.+-.+-
T Consensus 212 iAQIGk~FRNEIs-P-r~~l~R~REF~q~EiE~-Fv~P~~~ 249 (394)
T d1atia2 212 IAQIGKAFRNEIT-P-RNFIFRVREFEQMEIEY-FVRPGED 249 (394)
T ss_dssp EEEEEEEEBCCSS-C-CTGGGSCSEEEEEEEEE-EECGGGH
T ss_pred eeeeccccccccC-c-ccCCcccccceeeeeEE-EEeCCcc
Confidence 9999999999943 3 43 56999999988 5555443
No 49
>d1jmca1 b.40.4.3 (A:183-298) Replication protein A 70 KDa subunit (RPA70) {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.37 E-value=0.92 Score=37.68 Aligned_cols=61 Identities=18% Similarity=0.126 Sum_probs=43.7
Q ss_pred cEEEEeEEeecc------eec-C-CCeEEEEEEcCCeEEEEEEecccchhhhhhcCCCccEEEEEE-EeEe
Q psy8087 71 TNINIPAIPGPP------AIP-G-KGLMFVTLRDGSGFIQCVLADILCQTEHALLLSTESSVQFRG-RIEK 132 (658)
Q Consensus 71 ~~v~~~Grv~~~------r~~-g-k~l~Fi~LrD~~~~iQvv~~~~~~~~~~~~~l~~es~V~v~G-~l~~ 132 (658)
..++|.|||.++ +.. | +++.-++|.|.+|.|++.+-++....|. ..|..|+++.++| .|++
T Consensus 13 ~~~~I~~RV~~k~~~r~f~~~~~~g~v~~~~l~De~G~I~~t~~~~~~~~f~-~~l~~G~vy~i~~~~V~~ 82 (116)
T d1jmca1 13 SKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNEQVDKFF-PLIEVNKVYYFSKGTLKI 82 (116)
T ss_dssp CCCEEEEEEEEECCCEEEECSSCEEEEEEEEEECSSCEEEEEEEHHHHHHHG-GGCCTTCEEEEECCEEEE
T ss_pred CCEEEEEEEEEeccceEEECCCCCceEEEEEEEcCCCCEEEEEchhhhhhhH-hhcccCCEEEEcceEEEE
Confidence 458899999643 222 1 1467889999999999999876544443 3599999999976 4544
No 50
>d2pi2e1 b.40.4.3 (E:3-117) Replication protein A 14 KDa (RPA14) subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.46 E-value=2.2 Score=35.34 Aligned_cols=55 Identities=24% Similarity=0.206 Sum_probs=41.9
Q ss_pred cCCcEEEEeEEeecceecCCCeEEEEEEcCC-eEEEEEEecccchhhhhhcCCCccEEEEEEEeEe
Q psy8087 68 YIITNINIPAIPGPPAIPGKGLMFVTLRDGS-GFIQCVLADILCQTEHALLLSTESSVQFRGRIEK 132 (658)
Q Consensus 68 ~~~~~v~~~Grv~~~r~~gk~l~Fi~LrD~~-~~iQvv~~~~~~~~~~~~~l~~es~V~v~G~l~~ 132 (658)
..|+.|++.|+|.+++-.|+ .| .+++.. +.++|.+.... ....+..|.|.|++..
T Consensus 18 ~~Gk~V~ivGkV~~v~~~g~--~~-~~~s~D~~~V~v~l~~~~-------~~~~~~~vEViG~V~~ 73 (115)
T d2pi2e1 18 FIDKPVCFVGRLEKIHPTGK--MF-ILSDGEGKNGTIELMEPL-------DEEISGIVEVVGRVTA 73 (115)
T ss_dssp STTCEEEEEEEEEEECTTSS--EE-EEECTTSCEEEEECSSCC-------SSCCCSEEEEEEEECT
T ss_pred hCCCeEEEEEEEEEEcCCCC--EE-EEEcCCCCEEEEEeCCCC-------CCccCCeEEEEEEECC
Confidence 67999999999999887775 34 566644 46888876642 3567889999999953
No 51
>d1se8a_ b.40.4.3 (A:) ssDNA-binding protein {Deinococcus radiodurans [TaxId: 1299]}
Probab=79.27 E-value=3.2 Score=38.43 Aligned_cols=85 Identities=19% Similarity=0.193 Sum_probs=51.8
Q ss_pred EEEEEEEEEe---ee--cCCCceEEEEEE------eC-------CEEEEEEEcCCccchHHh-ccCCCCcEEEEEEEEEe
Q psy8087 514 RVTIFGWVHR---LR--RQGKGLMFVTLR------DG-------SGFIQCVLADILCQTEHA-LLLSTESSVQFRGRIEK 574 (658)
Q Consensus 514 ~V~v~GwI~~---~R--~~Gkkl~Fi~Lr------d~-------~~~iQvv~~~~~~~~~~~-~~L~~gs~V~V~G~v~~ 574 (658)
.|+|.|+|.+ +| ..|+.++-+.|- +. +..+.|++-..... ..+ ..|+.||.|.|+|.+..
T Consensus 5 ~v~l~G~l~~dpe~r~t~~G~~~~~f~lA~~~~~~~~~g~~~~~t~~~~v~~~g~~Ae-~~~~~~l~KG~~V~V~G~l~~ 83 (231)
T d1se8a_ 5 HVYLIGALARDPELRYTGNGMAVFEATVAGEDRVIGNDGRERNLPWYHRVSILGKPAE-WQAERNLKGGDAVVVEGTLEY 83 (231)
T ss_dssp EEEEEEEESSCCEEEECTTSCEEEEEEEEEEEEC-------CEEEEEEEEEEESHHHH-HHHHTCCCTTCEEEEEEEEEE
T ss_pred EEEEEEEECcCCEEEECCCCCEEEEEEEEECCcEECCCCCEEeeeeeeeEEEeCchhh-hhhhhccCCCCEEEEEEEEEe
Confidence 5788888875 45 345445545551 11 12366766543221 123 35999999999999976
Q ss_pred cCCC-C--CCCCceEEEEEEEEEEecCC
Q psy8087 575 VPEG-K--SAPGGHELKVDYWEVVGLAP 599 (658)
Q Consensus 575 ~~~~-~--~~~g~~El~~~~i~vls~~~ 599 (658)
..-. + .+...++|.+++++.|++.+
T Consensus 84 ~~~~~~dG~~r~~~~i~a~~v~~l~~~~ 111 (231)
T d1se8a_ 84 RQWEAPEGGKRSAVNVKALRMEQLGTQP 111 (231)
T ss_dssp EEEC-----CEEEEEEEEEEEEECSSCC
T ss_pred eeeECCCCCEEEEEEEEEEEEEEccCCc
Confidence 4311 1 11234899999999997753
No 52
>d1wjja_ b.40.4.3 (A:) Hypothetical protein At4g28440 (F20O9.120) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=73.44 E-value=16 Score=31.08 Aligned_cols=87 Identities=17% Similarity=0.187 Sum_probs=61.3
Q ss_pred ccceeecccCCccCCcEEEEEEEEEeee-------cC---------C--CceEEEEEEeCCEEEEEEEcCCccchHHhcc
Q psy8087 498 PAVRIKIKDGEKYRDKRVTIFGWVHRLR-------RQ---------G--KGLMFVTLRDGSGFIQCVLADILCQTEHALL 559 (658)
Q Consensus 498 ~~~~~~i~~~~~~~g~~V~v~GwI~~~R-------~~---------G--kkl~Fi~Lrd~~~~iQvv~~~~~~~~~~~~~ 559 (658)
.+++++|+++.. ..+.|.|.++|-.+- .. | .+++-+.+-|.+|.|.+.+=.+ ....
T Consensus 13 k~~~~kI~dL~p-g~~~vnl~vkVl~~~~~~~~~r~~~~~~~~~~~g~~~~v~~~~v~DeTG~i~~tlW~~-----~~~~ 86 (145)
T d1wjja_ 13 KPVFVKVEQLKP-GTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDETGCILFTARND-----QVDL 86 (145)
T ss_dssp CCSSCCSTTCCT-TCCCEEEEEEEEEEEECCSSSSCCSCSSCCSSCCCCCCCEEEEEECSSCEEEEEECTT-----HHHH
T ss_pred CCceeEHHHCCC-CCCCceEEEEEEEcccceeecccccccccccccCCCcEEEEEEEEccCCeEEEEEEec-----cccc
Confidence 345678887654 345689999998752 11 1 1477889999999999888653 2335
Q ss_pred CCCCcEEEEEEEEEecCCCCCCCCceEEEEEEEEEE
Q psy8087 560 LSTESSVQFRGRIEKVPEGKSAPGGHELKVDYWEVV 595 (658)
Q Consensus 560 L~~gs~V~V~G~v~~~~~~~~~~g~~El~~~~i~vl 595 (658)
|..||+|.+++-..+.- .|.++|.+.+...+
T Consensus 87 l~~Gd~v~i~na~v~~~-----~G~~~L~vg~~g~I 117 (145)
T d1wjja_ 87 MKPGATVILRNSRIDMF-----KGTMRLGVDKWGRI 117 (145)
T ss_dssp TCTTCEEEEEEEEEEEE-----TTEEEEEECTTCCB
T ss_pred cCcCCEEEEeeEEEEEE-----CCEEEEEECCCEEE
Confidence 89999999997665533 57789998764333
No 53
>d1o7ia_ b.40.4.3 (A:) Archaeal ssDNA-binding protein {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=73.36 E-value=5.8 Score=32.42 Aligned_cols=67 Identities=9% Similarity=0.074 Sum_probs=45.7
Q ss_pred cEEEEeEEeecc---ee----cC-CCeEEEEEEcCCeEEEEEEecccchhhhhhcCCCccEEEEEEEeEeCCCCccceEe
Q psy8087 71 TNINIPAIPGPP---AI----PG-KGLMFVTLRDGSGFIQCVLADILCQTEHALLLSTESSVQFRGRIEKVPEENMKVQL 142 (658)
Q Consensus 71 ~~v~~~Grv~~~---r~----~g-k~l~Fi~LrD~~~~iQvv~~~~~~~~~~~~~l~~es~V~v~G~l~~~p~~~~d~~l 142 (658)
..|+|.|+|..+ |. .| +.+..+.|.|.+|.|.+.+=.+.. ..+..|++|.+++.-...-.+.+++.+
T Consensus 13 ~~v~i~~~V~~~~~~r~~~~~~g~~~v~~~~i~DeTG~i~~~~W~~~~-----~~l~~Gdvv~i~na~v~~~~g~~el~~ 87 (115)
T d1o7ia_ 13 ESVNVTVRVLEASEARQIQTKNGVRTISEAIVGDETGRVKLTLWGKHA-----GSIKEGQVVKIENAWTTAFKGQVQLNA 87 (115)
T ss_dssp SSEEEEEEEEEECCCEEECCTTCCEEEEEEEEEETTEEEEEEEEGGGT-----TCCCTTCEEEEEEEEEEEETTEEEEEE
T ss_pred CCEEEEEEEEECCCCceeecCCCCEEEEEEEEEcCCCeEEEEEecccc-----ccCCCCCEEEEeeEEEEEECCeEEEEE
Confidence 358999998874 22 12 247789999999999998865421 258899999998765543333344444
No 54
>d1se8a_ b.40.4.3 (A:) ssDNA-binding protein {Deinococcus radiodurans [TaxId: 1299]}
Probab=71.17 E-value=9.9 Score=34.85 Aligned_cols=83 Identities=20% Similarity=0.294 Sum_probs=53.0
Q ss_pred cEEEEEEEEEe---eec--CCCceEEEEEE------e-------CCEEEEEEEcCCccchHHhccCCCCcEEEEEEEEEe
Q psy8087 513 KRVTIFGWVHR---LRR--QGKGLMFVTLR------D-------GSGFIQCVLADILCQTEHALLLSTESSVQFRGRIEK 574 (658)
Q Consensus 513 ~~V~v~GwI~~---~R~--~Gkkl~Fi~Lr------d-------~~~~iQvv~~~~~~~~~~~~~L~~gs~V~V~G~v~~ 574 (658)
.+|.|.|+|.+ +|. .|+.++-+.|- | .+..+.|++-.... +.+..|+.||.|.|+|.+..
T Consensus 128 N~v~l~G~l~~dpe~r~t~~G~~~~~f~va~~~~~~~~~g~~~~~t~~~~v~~~g~~A--e~~~~l~KG~~V~V~G~l~~ 205 (231)
T d1se8a_ 128 NEVLVLGNVTRDPEIRYTPAGDAVLSLSIAVNENYQDRQGQRQEKVHYIDATLWRDLA--ENMKELRKGDPVMIMGRLVN 205 (231)
T ss_dssp EEEEEEEEECSCCEEEECTTCCEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEETHHH--HHHTTCCTTCEEEEEEEEEE
T ss_pred eeEEEEEEeCCCcEEEECCCCCEEEEEEEEECCCeECCCCceeeeeEEEEeEecCcHH--HHhhhCCCCCEEEEEEEeEe
Confidence 36899999976 343 45555555551 1 12247777765432 23456999999999999976
Q ss_pred cC-CCC--CCCCceEEEEEEEEEEec
Q psy8087 575 VP-EGK--SAPGGHELKVDYWEVVGL 597 (658)
Q Consensus 575 ~~-~~~--~~~g~~El~~~~i~vls~ 597 (658)
.. .++ .....++|.|+++++|++
T Consensus 206 ~~~~~kdG~~r~~~~i~a~~v~~L~r 231 (231)
T d1se8a_ 206 EGWTDKDGNKRNSTRVEATRVEALAR 231 (231)
T ss_dssp EECC------CEEEEEEEEEEEECCC
T ss_pred ceEECCCCCEEEEEEEEEEEEEEccC
Confidence 54 111 112358999999999864
No 55
>d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]}
Probab=69.75 E-value=1.6 Score=42.44 Aligned_cols=51 Identities=24% Similarity=0.310 Sum_probs=31.6
Q ss_pred eeEEEEEeCCcc---eeeeceeccCCHHHHHHHHHHcCCCCCCCcchHHHhhcCCCCccceecchhHHHHHHhcc
Q psy8087 364 TESVDVLFPNVG---EVIGGSMRIWDPEELLAGYKREGIDPAPYYWYTDQRKYGSTPHGGYGLGLERVLCWLLNQ 435 (658)
Q Consensus 364 ~~~fdL~~~G~~---Ei~~G~~r~~d~~~~~~~~~~~g~~~~~~~~yl~a~~~G~pP~gG~GiGidRL~m~l~g~ 435 (658)
.--|++++.+.| .|++|+. |+.+..+| .-.--|.-||++|+|||+.+|--.
T Consensus 265 G~vFe~~~~~~g~~~~i~~GGR----YD~L~~~f-----------------~~~~~pAvGfsi~ld~l~~~l~~~ 318 (324)
T d1h4vb2 265 RTAFEVHHEEIGAQSALGGGGR----YDGLSELL-----------------GGPRVPGVGFAFGVERVALALEAE 318 (324)
T ss_dssp EEEEEEEC------CEEEEEEE----CTTHHHHT-----------------TCCCCCEEEEEEEHHHHHHHHHHT
T ss_pred CeEEEEEECCCCccCeeecCCc----cHHHHHhc-----------------CCCCCCeEEEEeeHHHHHHHHHhc
Confidence 346999998643 4888875 33333333 111237899999999999988643
No 56
>d1sr3a_ b.40.9.1 (A:) Heme chaperone CcmE {Escherichia coli [TaxId: 562]}
Probab=66.45 E-value=14 Score=30.16 Aligned_cols=75 Identities=23% Similarity=0.311 Sum_probs=51.5
Q ss_pred cCCcEEEEEEEEE--ee-ecCCCceEEEEEEeCCEEEEEEEcCCccchHHhccCCCCcEEEEEEEEEecCCCCCCCCceE
Q psy8087 510 YRDKRVTIFGWVH--RL-RRQGKGLMFVTLRDGSGFIQCVLADILCQTEHALLLSTESSVQFRGRIEKVPEGKSAPGGHE 586 (658)
Q Consensus 510 ~~g~~V~v~GwI~--~~-R~~Gkkl~Fi~Lrd~~~~iQvv~~~~~~~~~~~~~L~~gs~V~V~G~v~~~~~~~~~~g~~E 586 (658)
..|++++|.|.|. ++ |..+.--+-+.|.|+...|.|..++-... .++.|.-|.|+|.+.. ++ -
T Consensus 26 ~~g~~iRvgG~V~~gSi~~~~~~~~~~F~itD~~~~i~V~Y~GilPd-----lF~eg~~VVveG~~~~--------~~-~ 91 (114)
T d1sr3a_ 26 EVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPD-----LFREGQGVVVQGELEK--------GN-H 91 (114)
T ss_dssp CTTSEEEEEEEECTTTCEECSSSSEEEEEEECSSCEEEEEEESCCCT-----TCCTTSEEEEEEEECS--------SS-E
T ss_pred cCCcEEEEeeEEEEeEEEeecCcceEEEEEccCCcEEEEEecCCCCh-----hhcCCCeEEEEEEECC--------CC-E
Confidence 4689999999995 34 54432123457789999999999874322 4788999999999832 11 2
Q ss_pred EEEEEEEEEecCCC
Q psy8087 587 LKVDYWEVVGLAPA 600 (658)
Q Consensus 587 l~~~~i~vls~~~~ 600 (658)
+.++ +||.+|+.
T Consensus 92 f~A~--~vlaKh~e 103 (114)
T d1sr3a_ 92 ILAK--EVLAKHDE 103 (114)
T ss_dssp EEES--SCBCCSCC
T ss_pred EEEE--EEEecCCC
Confidence 3333 46788864
No 57
>d1sr3a_ b.40.9.1 (A:) Heme chaperone CcmE {Escherichia coli [TaxId: 562]}
Probab=64.98 E-value=14 Score=30.12 Aligned_cols=59 Identities=19% Similarity=0.277 Sum_probs=44.6
Q ss_pred cCCcEEEEeEEee--cceecCCC--eEEEEEEcCCeEEEEEEecccchhhhhhcCCCccEEEEEEEeEe
Q psy8087 68 YIITNINIPAIPG--PPAIPGKG--LMFVTLRDGSGFIQCVLADILCQTEHALLLSTESSVQFRGRIEK 132 (658)
Q Consensus 68 ~~~~~v~~~Grv~--~~r~~gk~--l~Fi~LrD~~~~iQvv~~~~~~~~~~~~~l~~es~V~v~G~l~~ 132 (658)
..|+.++|.|.|. ++.+.+++ +.| .|.|+...|.|..+.-... .++.|.-|.|+|.+..
T Consensus 26 ~~g~~iRvgG~V~~gSi~~~~~~~~~~F-~itD~~~~i~V~Y~GilPd-----lF~eg~~VVveG~~~~ 88 (114)
T d1sr3a_ 26 EVGQRLRVGGMVMPGSVQRDPNSLKVTF-TIYDAEGSVDVSYEGILPD-----LFREGQGVVVQGELEK 88 (114)
T ss_dssp CTTSEEEEEEEECTTTCEECSSSSEEEE-EEECSSCEEEEEEESCCCT-----TCCTTSEEEEEEEECS
T ss_pred cCCcEEEEeeEEEEeEEEeecCcceEEE-EEccCCcEEEEEecCCCCh-----hhcCCCeEEEEEEECC
Confidence 4578999999995 56665554 456 7889999999998754322 3678999999999863
No 58
>d2b3ga1 b.40.4.3 (A:3-114) Replication protein A 70 KDa subunit (RPA70) {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.88 E-value=18 Score=29.32 Aligned_cols=62 Identities=21% Similarity=0.146 Sum_probs=46.0
Q ss_pred EEEEEeCCEEEE-EEEcCCccchHHhccCCCCcEEEEEEEEEecCCCCCCCCceEEEEEEEEEEecC
Q psy8087 533 FVTLRDGSGFIQ-CVLADILCQTEHALLLSTESSVQFRGRIEKVPEGKSAPGGHELKVDYWEVVGLA 598 (658)
Q Consensus 533 Fi~Lrd~~~~iQ-vv~~~~~~~~~~~~~L~~gs~V~V~G~v~~~~~~~~~~g~~El~~~~i~vls~~ 598 (658)
=+.|.||...+| +++.......-.-..|+.+++|.+.=.....-. .+..-|.+.+++|+.+.
T Consensus 41 R~~lSDG~~~~~~amLatqln~~v~~g~l~~~sii~l~~y~~n~i~----~~k~vlIIldleVl~~~ 103 (112)
T d2b3ga1 41 RLLMSDGLNTLSSFMLATQLNPLVEEEQLSSNCVCQIHRFIVNTLK----DGRRVVILMELEVLKSA 103 (112)
T ss_dssp EEEEECSSEEEEEEEECGGGHHHHHTTSSCTTCEEEEEEEEEEECT----TSCEEEEEEEEEEEECH
T ss_pred EEEEECcchhhhhhhhhhhhhhhhhcCCccCCCEEEEeEEEEcccc----CCceEEEEeeeEEeccc
Confidence 378999999999 588765443334456999999999988765531 24467888999999763
No 59
>d1gm5a2 b.40.4.9 (A:106-285) RecG "wedge" domain {Thermotoga maritima [TaxId: 2336]}
Probab=64.51 E-value=3.5 Score=36.45 Aligned_cols=64 Identities=17% Similarity=0.137 Sum_probs=44.4
Q ss_pred cCCcEEEEEEEEEeee---cCCCceEEEEEEeCCEEEEEEEcCCccchHHhccCCCCcEEEEEEEEEe
Q psy8087 510 YRDKRVTIFGWVHRLR---RQGKGLMFVTLRDGSGFIQCVLADILCQTEHALLLSTESSVQFRGRIEK 574 (658)
Q Consensus 510 ~~g~~V~v~GwI~~~R---~~Gkkl~Fi~Lrd~~~~iQvv~~~~~~~~~~~~~L~~gs~V~V~G~v~~ 574 (658)
..|+.|+|.|.|.+.+ ..+..+.-+.+.|+++.|.|++-..... ........|+.|.|+|++..
T Consensus 58 ~~g~~vti~g~V~~~~~~~~~~~~~~~~~v~D~~g~i~l~fFn~~~~-~~~~k~~~G~~v~v~Gkvk~ 124 (180)
T d1gm5a2 58 LPGEKVTTQGKIVSVETKKFQNMNILTAVLSDGLVHVPLKWFNQDYL-QTYLKQLTGKEVFVTGTVKS 124 (180)
T ss_dssp CSSCCCEEEECCCCCEEEECSSCEEEEEEECCSSCCEEEEECSCCTT-HHHHHTTCSSCEEEEEEECS
T ss_pred CcceeeeeeeEEEeeccccccccceeEEEEEeccceEEEEEeCcHHH-HHHHhhhcCceEEEEEEEee
Confidence 4688899999997543 2233556688899999999987653221 11123347999999999843
No 60
>d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]}
Probab=63.62 E-value=2.2 Score=41.35 Aligned_cols=47 Identities=13% Similarity=0.203 Sum_probs=32.5
Q ss_pred EEEEEeCCcc-eeeeceeccCCHHHHHHHHHHcCCCCCCCcchHHHhhcCCCCccceecchhHHHHHHhc
Q psy8087 366 SVDVLFPNVG-EVIGGSMRIWDPEELLAGYKREGIDPAPYYWYTDQRKYGSTPHGGYGLGLERVLCWLLN 434 (658)
Q Consensus 366 ~fdL~~~G~~-Ei~~G~~r~~d~~~~~~~~~~~g~~~~~~~~yl~a~~~G~pP~gG~GiGidRL~m~l~g 434 (658)
-|+++.+|.+ .||+|+. |+.+.+.| | +..|..||+||+|||+..|..
T Consensus 268 vF~~~~~~~~~~i~~GGR----YD~L~~~~---g---------------~~~~avGfsi~ld~i~~~l~~ 315 (318)
T d1z7ma1 268 MFKAYSSAANQPILSGGR----YDQLLSNF---Q---------------EEAFAIGFCCHMDTILKALER 315 (318)
T ss_dssp EEEEEETTEEEEEEEEEE----CHHHHHTS---S---------------SCCCCEEEEEEHHHHHHHHHH
T ss_pred EEEEEECCCCCeEEECcc----hHHHHHhc---C---------------CCCCEEEEEeeHHHHHHHHHh
Confidence 5999998543 4888873 44444433 1 124788999999999987754
No 61
>d1ltla_ b.40.4.11 (A:) DNA replication initiator (cdc21/cdc54) N-terminal domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=62.91 E-value=2.7 Score=39.22 Aligned_cols=48 Identities=21% Similarity=0.261 Sum_probs=33.7
Q ss_pred EEEEEcCCccchHHhccCCCCcEEEEEEEEEecCCCCCCCCceEEEEEEEEEE
Q psy8087 543 IQCVLADILCQTEHALLLSTESSVQFRGRIEKVPEGKSAPGGHELKVDYWEVV 595 (658)
Q Consensus 543 iQvv~~~~~~~~~~~~~L~~gs~V~V~G~v~~~~~~~~~~g~~El~~~~i~vl 595 (658)
+.|++.. +....+++||.|.|+|.+...+.++.+....-|.+..|++|
T Consensus 192 i~v~l~~-----dlvd~~~pGd~V~i~GI~~~~~~~~~~~~~~~i~a~~Ie~l 239 (239)
T d1ltla_ 192 ITVVLED-----DLVDTLTPGDIVRVTGTLRTVRDERTKRFKNFIYGNYTEFL 239 (239)
T ss_dssp EEEEEEG-----GGTTCCCTTCEEEEEEEEEEEEETTTTEEEEEEEEEECCBC
T ss_pred EEEEEec-----cccCccCCCCEEEEEEEEEEeecCCCCceEEEEEEEEEEEC
Confidence 4555543 34568999999999999976654455555667777777654
No 62
>d1j6qa_ b.40.9.1 (A:) Heme chaperone CcmE {Shewanella putrefaciens [TaxId: 24]}
Probab=55.54 E-value=34 Score=27.07 Aligned_cols=58 Identities=21% Similarity=0.299 Sum_probs=42.8
Q ss_pred ccCCcEEEEEEEEEe---eecCCC-ceEEEEEEeCC-EEEEEEEcCCccchHHhccCCCCcEEEEEEEE
Q psy8087 509 KYRDKRVTIFGWVHR---LRRQGK-GLMFVTLRDGS-GFIQCVLADILCQTEHALLLSTESSVQFRGRI 572 (658)
Q Consensus 509 ~~~g~~V~v~GwI~~---~R~~Gk-kl~Fi~Lrd~~-~~iQvv~~~~~~~~~~~~~L~~gs~V~V~G~v 572 (658)
...|++++|.|.|.. .|..+. .+.| .+.|+. ..|.|..++-.. ..++.|.-|.|+|.+
T Consensus 23 ~~~~~~iRvGG~V~~gSi~~~~~~~~~~F-~itD~~~~~i~V~Y~G~lP-----dlF~eg~gVVveG~~ 85 (100)
T d1j6qa_ 23 PEAGQRIRVGGMVTVGSMVRDPNSLHVQF-AVHDSLGGEILVTYDDLLP-----DLFREGQGIVAQGVL 85 (100)
T ss_dssp SCTTCEEEEEEEECTTCCEECTTSSCEEE-EEECTTCCCEEEEECSCCT-----TSCCSSSEEEEEEEE
T ss_pred ccCCCEEEEeeEEeeeEEEecCCccEEEE-EEcCCceeEEEEEeCCCCC-----chhcCCCeEEEEEEE
Confidence 346899999999973 455432 4566 478874 569999887432 147889999999998
No 63
>d1ue1a_ b.40.4.3 (A:) ssDNA-binding protein {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=54.96 E-value=30 Score=27.74 Aligned_cols=80 Identities=23% Similarity=0.272 Sum_probs=48.0
Q ss_pred cEEEEEEEEEe---eec--CCCceEEEEEE-e--------------CCEEEEEEEcCCccchHHhccCCCCcEEEEEEEE
Q psy8087 513 KRVTIFGWVHR---LRR--QGKGLMFVTLR-D--------------GSGFIQCVLADILCQTEHALLLSTESSVQFRGRI 572 (658)
Q Consensus 513 ~~V~v~GwI~~---~R~--~Gkkl~Fi~Lr-d--------------~~~~iQvv~~~~~~~~~~~~~L~~gs~V~V~G~v 572 (658)
..|+|.|+|.+ +|. .|+.++-+.|- . .+..+.|++-.... ......|..||.|.|+|.+
T Consensus 3 N~V~L~G~l~~dpe~r~~~~G~~v~~f~lA~~~~~~~~~~~~~~~~~t~~~~v~~~g~~A-e~~~~~l~KG~~V~V~G~L 81 (118)
T d1ue1a_ 3 TTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAA-ENVAESLTRGARVIVSGRL 81 (118)
T ss_dssp CEEEEEEEESSCCEEEECTTSCEEEEEEEEECCCCCC-----CCCCCCEEEEEEEEHHHH-HHHHHHCCTTCEEEEEEEE
T ss_pred CEEEEEEEcCcCCEEEECCCCCEEEEEEEEecccccccCCCcccccceeeEEEEeChHHH-HHHHHhccCCCEEEEEeEe
Confidence 46889999975 444 44445544442 1 12347777654321 1234569999999999999
Q ss_pred EecC-CCCC--CCCceEEEEEEEE
Q psy8087 573 EKVP-EGKS--APGGHELKVDYWE 593 (658)
Q Consensus 573 ~~~~-~~~~--~~g~~El~~~~i~ 593 (658)
.... +++. +...++|.++++-
T Consensus 82 ~~~~~~~~dG~~r~~~~v~a~~vg 105 (118)
T d1ue1a_ 82 KQRSFETREGEKRTVIEVEVDEIG 105 (118)
T ss_dssp EEEEECSSSSSCEEEEEEEEEEEE
T ss_pred eeceEECCCCCEEEEEEEEEEEec
Confidence 8754 1121 1134788888774
No 64
>d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]}
Probab=53.16 E-value=3.8 Score=38.34 Aligned_cols=27 Identities=11% Similarity=0.096 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCcEEecCC
Q psy8087 632 VLLMRSVLLQALRAHFADRNYTEVNIE 658 (658)
Q Consensus 632 ifr~Rs~i~~~iR~fL~~~gF~EVeTp 658 (658)
=.+++.+|.+.+++.+.+.||.||.||
T Consensus 39 G~~l~~~l~~~~~~~~~~~G~~eV~~P 65 (272)
T d1hc7a2 39 GYAIWENIQQVLDRMFKETGHQNAYFP 65 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECBCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEEeec
Confidence 368999999999999999999999999
No 65
>d1jjcb5 d.104.1.1 (B:475-681) Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, central domain {Thermus thermophilus [TaxId: 274]}
Probab=47.58 E-value=6.7 Score=35.41 Aligned_cols=72 Identities=17% Similarity=0.098 Sum_probs=42.6
Q ss_pred CchHHHhhhCCcEEEcCCccccccC----CCCccceee-ccCC-cceeeccCH--HHHHHHh--cc-cC-C--cEEEEee
Q psy8087 160 GYPPEVSLANGIAKVTPPTLVQTQV----EGGSTLFSL-NFFG-EPAYLTQSS--QLYLETC--LP-AL-G--DVYCIAQ 225 (658)
Q Consensus 160 ~~iR~fl~~~gF~EV~TPiL~~~~~----eG~~~~F~~-~~~~-~~~~L~~Sp--qlylk~l--i~-g~-~--rvfeI~~ 225 (658)
+.+|++|...||.||-|-.++.... ........+ |-.. ..-+||.|- .|-.-.. +. +. + |+||||+
T Consensus 22 ~~ir~~L~~~Gf~Ev~tysf~s~~~~~~~~~~~~~i~l~NPis~e~~~lR~sLlpgLL~~~~~N~~r~~~~~~~lFEiG~ 101 (207)
T d1jjcb5 22 QRLREVLSGLGFQEVYTYSFMDPEDARRFRLDPPRLLLLNPLAPEKAALRTHLFPGLVRVLKENLDLDRPERALLFEVGR 101 (207)
T ss_dssp HHHHHHHHHHTCEECCCCSEECTTHHHHTTCCCCSCEESSCSSGGGSEECSCSHHHHHHHHHHHHHHSCCSEEEEEEEEE
T ss_pred HHHHHHHHHCCcchhcCCCcCCHHHHHhhcCCCCcEEEeCCcchhhhhhhhhcchHHHHHHHhCcccccccceeeEeeee
Confidence 4799999999999999999964211 011111221 2222 234788774 3332221 22 43 3 6899999
Q ss_pred eeecCC
Q psy8087 226 SYRAEN 231 (658)
Q Consensus 226 ~FR~E~ 231 (658)
+|+...
T Consensus 102 vf~~~~ 107 (207)
T d1jjcb5 102 VFRERE 107 (207)
T ss_dssp EESSSE
T ss_pred eeeccc
Confidence 998653
No 66
>d1j5wa_ d.104.1.1 (A:) Glycyl-tRNA synthetase (GlyRS) alpha chain {Thermotoga maritima [TaxId: 2336]}
Probab=47.56 E-value=3.6 Score=38.72 Aligned_cols=57 Identities=19% Similarity=0.191 Sum_probs=43.2
Q ss_pred CceeEEEEEeCCcceeeeceeccCCHHHHHHHHHHc-CCCCCCCcchHHHhhcCCCCccceecchhHHHHHHhcccCcch
Q psy8087 362 ALTESVDVLFPNVGEVIGGSMRIWDPEELLAGYKRE-GIDPAPYYWYTDQRKYGSTPHGGYGLGLERVLCWLLNQYHVRD 440 (658)
Q Consensus 362 ~~~~~fdL~~~G~~Ei~~G~~r~~d~~~~~~~~~~~-g~~~~~~~~yl~a~~~G~pP~gG~GiGidRL~m~l~g~~~Ird 440 (658)
.+...||+-++|| ||.- -.-|.+. |++ -.|.++=+--|+|||.|.+-|.+||-|
T Consensus 122 AwGlGWEVwldGM-EItQ-----------FTYFQQvGg~~-------------c~pv~~EiTYGLERiaMylQ~vd~v~D 176 (281)
T d1j5wa_ 122 AWGVGWEVWLDGM-EITQ-----------FTYFQQIGGIS-------------LKDIPLEITYGLERIAMYLQGVDNVYE 176 (281)
T ss_dssp EEEEEEEEEETTE-EEEE-----------EEEEEEBTTBC-------------CSSCCEEEEEEHHHHHHHHHTCSSGGG
T ss_pred ceeeeeEEEEcCe-eeee-----------eehhhhhcCcc-------------ccccchhhhhhHHHHHHHHhCcchhee
Confidence 4678999999999 8852 1222222 233 147888999999999999999999999
Q ss_pred hhH
Q psy8087 441 KYQ 443 (658)
Q Consensus 441 vi~ 443 (658)
+..
T Consensus 177 l~w 179 (281)
T d1j5wa_ 177 VQW 179 (281)
T ss_dssp CEE
T ss_pred eec
Confidence 865
No 67
>d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]}
Probab=46.44 E-value=5.6 Score=37.52 Aligned_cols=27 Identities=11% Similarity=0.162 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCcEEecCC
Q psy8087 632 VLLMRSVLLQALRAHFADRNYTEVNIE 658 (658)
Q Consensus 632 ifr~Rs~i~~~iR~fL~~~gF~EVeTp 658 (658)
=++++.+|.+.+|+.+++.||.||.||
T Consensus 34 G~~i~~~i~~~i~~~~~~~G~~ev~~P 60 (268)
T d1nj8a3 34 GFKIRRYTFEIIRNLLDESGHDEALFP 60 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECBCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEEeeh
Confidence 347899999999999999999999999
No 68
>d1wjja_ b.40.4.3 (A:) Hypothetical protein At4g28440 (F20O9.120) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=44.86 E-value=76 Score=26.41 Aligned_cols=67 Identities=12% Similarity=0.086 Sum_probs=45.8
Q ss_pred cEEEEeEEeecc-------eecC-----------CCeEEEEEEcCCeEEEEEEecccchhhhhhcCCCccEEEEEEEeEe
Q psy8087 71 TNINIPAIPGPP-------AIPG-----------KGLMFVTLRDGSGFIQCVLADILCQTEHALLLSTESSVQFRGRIEK 132 (658)
Q Consensus 71 ~~v~~~Grv~~~-------r~~g-----------k~l~Fi~LrD~~~~iQvv~~~~~~~~~~~~~l~~es~V~v~G~l~~ 132 (658)
..|+|.++|..+ |+.+ ..++-+.+-|.+|.|.+.+=.+.. ..+..|++|.+.+....
T Consensus 27 ~~vnl~vkVl~~~~~~~~~r~~~~~~~~~~~g~~~~v~~~~v~DeTG~i~~tlW~~~~-----~~l~~Gd~v~i~na~v~ 101 (145)
T d1wjja_ 27 TGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDETGCILFTARNDQV-----DLMKPGATVILRNSRID 101 (145)
T ss_dssp CCEEEEEEEEEEEECCSSSSCCSCSSCCSSCCCCCCCEEEEEECSSCEEEEEECTTHH-----HHTCTTCEEEEEEEEEE
T ss_pred CCceEEEEEEEcccceeecccccccccccccCCCcEEEEEEEEccCCeEEEEEEeccc-----cccCcCCEEEEeeEEEE
Confidence 458888888763 1111 137888999999999998865421 24889999999988765
Q ss_pred CCCCccceEe
Q psy8087 133 VPEENMKVQL 142 (658)
Q Consensus 133 ~p~~~~d~~l 142 (658)
.-.+.+++-+
T Consensus 102 ~~~G~~~L~v 111 (145)
T d1wjja_ 102 MFKGTMRLGV 111 (145)
T ss_dssp EETTEEEEEE
T ss_pred EECCEEEEEE
Confidence 4334344443
No 69
>d3ulla_ b.40.4.3 (A:) ssDNA-binding protein {Human (Homo sapiens), mitochondria [TaxId: 9606]}
Probab=42.35 E-value=39 Score=26.81 Aligned_cols=62 Identities=10% Similarity=0.110 Sum_probs=35.2
Q ss_pred EEEEeEEeec---cee--cCCCeEEEEEE-c-----C-------------CeEEEEEEecccchhhhhhcCCCccEEEEE
Q psy8087 72 NINIPAIPGP---PAI--PGKGLMFVTLR-D-----G-------------SGFIQCVLADILCQTEHALLLSTESSVQFR 127 (658)
Q Consensus 72 ~v~~~Grv~~---~r~--~gk~l~Fi~Lr-D-----~-------------~~~iQvv~~~~~~~~~~~~~l~~es~V~v~ 127 (658)
.|+|.|||.+ +|. .|+.++-+.|- + . +.-+.|++-.+....+....++.|+.|.|+
T Consensus 7 ~V~L~G~l~~dpe~r~t~~G~~v~~f~vAv~~~~~~~~~~~~~~g~~~~~t~w~~v~~~g~~~a~~~~~~l~KG~~V~V~ 86 (115)
T d3ulla_ 7 RVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRISVFRPGLRDVAYQYVKKGSRIYLE 86 (115)
T ss_dssp EEEEEEEECSCCEEECCTTSCCEEEEEEEEEEEECC---------CCEEEEEEEEEEECSTTHHHHHHHHCCTTCEEEEE
T ss_pred EEEEEEECCCCCEEEEeCCCCEEEEEEEEcccccccccccccccccceeeeeeeeeeeeecccchhhhhhccCCCEEEEE
Confidence 4889999986 443 35555433441 1 1 112444443332112222358999999999
Q ss_pred EEeEeC
Q psy8087 128 GRIEKV 133 (658)
Q Consensus 128 G~l~~~ 133 (658)
|.++..
T Consensus 87 Grl~~~ 92 (115)
T d3ulla_ 87 GKIDYG 92 (115)
T ss_dssp EEEECC
T ss_pred EEEeee
Confidence 999854
No 70
>d1riqa2 d.104.1.1 (A:1-236) Alanyl-tRNA synthetase (AlaRS) {Aquifex aeolicus [TaxId: 63363]}
Probab=39.96 E-value=4.9 Score=37.37 Aligned_cols=91 Identities=13% Similarity=0.189 Sum_probs=54.3
Q ss_pred CchHHHhhhCCcEEEcCCccccccCCCCccceeeccCCcceeeccC-HHHHHHHhcc----cCCcEEEEeeeeecC----
Q psy8087 160 GYPPEVSLANGIAKVTPPTLVQTQVEGGSTLFSLNFFGEPAYLTQS-SQLYLETCLP----ALGDVYCIAQSYRAE---- 230 (658)
Q Consensus 160 ~~iR~fl~~~gF~EV~TPiL~~~~~eG~~~~F~~~~~~~~~~L~~S-pqlylk~li~----g~~rvfeI~~~FR~E---- 230 (658)
+.+-+||.++|..-|..--|.+.. ...-.| ..| .+.++..++. -..|+-..-+|.|.-
T Consensus 9 ~~Fl~FF~~~gH~~v~s~slvp~~--DptlLF-----------tnAGM~~Fkp~flG~~~p~~~r~~~~QkCiR~~gk~n 75 (236)
T d1riqa2 9 ELFLSFFEKKGHTRVKSAPLVPEN--DPTLLF-----------VNAGMVPFKNVFLGLEKRPYKRATSCQKCLRVSGKHN 75 (236)
T ss_dssp HHHHHHHHHTTCEECCCCCSSCTT--CTTCSS-----------CCSTTGGGHHHHTTSSCCSCSEEEEEEEEECEETTEE
T ss_pred HHHHHHHHhCCCEEcCCCCcccCC--CCCeee-----------ecccchhhhhhhcCccccCCCccccccccccccCccc
Confidence 356789999999988764443321 111112 222 2233333332 267899999999972
Q ss_pred CC----CCccCcceeeeeeeEeecCCH--HHHHHHHHHHH
Q psy8087 231 NS----RTRRHLAEYTHVEAECAFLTF--DDLLDKLEDLI 264 (658)
Q Consensus 231 ~~----~~~rHl~EFt~lE~e~a~~d~--~~~m~~~e~li 264 (658)
+. .+.||+.=|.|| --.+|.|| ++.+...-+++
T Consensus 76 Dld~VG~t~rH~TfFEML-Gn~SFgdYfK~eai~~awe~l 114 (236)
T d1riqa2 76 DLEQVGYTSRHHTFFEML-GNFSFGDYFKKEAIEYAWEFV 114 (236)
T ss_dssp CTTTTTTSSSCCSEEEEE-EEEESSSCCHHHHHHHHHHHH
T ss_pred hhhhcCCcccchhhhhhc-cccccCchhHHHHHHHHHHHH
Confidence 23 245899999998 45678874 45555444444
No 71
>d1qvca_ b.40.4.3 (A:) ssDNA-binding protein {Escherichia coli [TaxId: 562]}
Probab=36.77 E-value=43 Score=27.88 Aligned_cols=82 Identities=21% Similarity=0.301 Sum_probs=47.4
Q ss_pred EEEEEEEEEe---eecC--CCceEEEEEE--------------eCCEEEEEEEcCCccchHHhccCCCCcEEEEEEEEEe
Q psy8087 514 RVTIFGWVHR---LRRQ--GKGLMFVTLR--------------DGSGFIQCVLADILCQTEHALLLSTESSVQFRGRIEK 574 (658)
Q Consensus 514 ~V~v~GwI~~---~R~~--Gkkl~Fi~Lr--------------d~~~~iQvv~~~~~~~~~~~~~L~~gs~V~V~G~v~~ 574 (658)
.|+|.|+|.+ +|.. |+.++-+.|- +.+..+.|++-..... .....|..||.|.|+|.+..
T Consensus 7 ~v~LiG~l~~dpe~r~~~~G~~v~~f~va~~~~~~~~~~~~~~~~t~w~~v~~~g~~Ae-~~~~~l~KG~~V~V~G~l~~ 85 (145)
T d1qvca_ 7 KVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAE-VASEYLRKGSQVYIEGQLRT 85 (145)
T ss_dssp EEEEEEEESSCCEEECCSSSCCEEEEEEEECCCCSCCSSSSCCCCCEEEEEEEETHHHH-HHHHHCCTTCEEEEEEEEEE
T ss_pred EEEEEEECCCCCEEEECCCCCEEEEEEEEecccccccccccccccceEEeeEEecchhh-hHhhhcccCCEEEEEEEEEE
Confidence 5788899876 4543 4445444442 1233477777653221 23456999999999999976
Q ss_pred cC-CCCCC--CCceEEEEE---EEEEEe
Q psy8087 575 VP-EGKSA--PGGHELKVD---YWEVVG 596 (658)
Q Consensus 575 ~~-~~~~~--~g~~El~~~---~i~vls 596 (658)
.. +.+.. ...+||.|+ .++.++
T Consensus 86 ~~~~~kdG~~r~~~ei~~~~~~~l~~l~ 113 (145)
T d1qvca_ 86 RKWTDQSGQDRYTTEVVVNVGGTMQMLG 113 (145)
T ss_dssp EEECSSSSCEEEEEEEECTTCEEEECCC
T ss_pred eeeECCCCCEEEEEEEEEecCCcEEECc
Confidence 54 21111 123677775 444443
No 72
>d1ue1a_ b.40.4.3 (A:) ssDNA-binding protein {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=33.94 E-value=63 Score=25.62 Aligned_cols=61 Identities=18% Similarity=0.219 Sum_probs=36.8
Q ss_pred EEEEeEEeec---cee--cCCCeEEEEEE-cC--------------CeEEEEEEecccchhhhhhcCCCccEEEEEEEeE
Q psy8087 72 NINIPAIPGP---PAI--PGKGLMFVTLR-DG--------------SGFIQCVLADILCQTEHALLLSTESSVQFRGRIE 131 (658)
Q Consensus 72 ~v~~~Grv~~---~r~--~gk~l~Fi~Lr-D~--------------~~~iQvv~~~~~~~~~~~~~l~~es~V~v~G~l~ 131 (658)
.|+|.|||.+ +|. .|+.++-+.|- +. +..+.|++-.+..+ .-...+..|+.|.|+|.|+
T Consensus 4 ~V~L~G~l~~dpe~r~~~~G~~v~~f~lA~~~~~~~~~~~~~~~~~t~~~~v~~~g~~Ae-~~~~~l~KG~~V~V~G~L~ 82 (118)
T d1ue1a_ 4 TITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAE-NVAESLTRGARVIVSGRLK 82 (118)
T ss_dssp EEEEEEEESSCCEEEECTTSCEEEEEEEEECCCCCC-----CCCCCCEEEEEEEEHHHHH-HHHHHCCTTCEEEEEEEEE
T ss_pred EEEEEEEcCcCCEEEECCCCCEEEEEEEEecccccccCCCcccccceeeEEEEeChHHHH-HHHHhccCCCEEEEEeEee
Confidence 5899999986 443 34445434442 11 12366666543221 1224699999999999997
Q ss_pred eC
Q psy8087 132 KV 133 (658)
Q Consensus 132 ~~ 133 (658)
..
T Consensus 83 ~~ 84 (118)
T d1ue1a_ 83 QR 84 (118)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 73
>d1fr3a_ b.40.6.1 (A:) Molybdate/tungstate binding protein MOP {Sporomusa ovata [TaxId: 2378]}
Probab=33.33 E-value=63 Score=23.03 Aligned_cols=50 Identities=8% Similarity=-0.059 Sum_probs=37.6
Q ss_pred EEEEEEEeeecCCCceEEEEEEeCCEEEEEEEcCCccchHHhccCCCCcEEEEE
Q psy8087 516 TIFGWVHRLRRQGKGLMFVTLRDGSGFIQCVLADILCQTEHALLLSTESSVQFR 569 (658)
Q Consensus 516 ~v~GwI~~~R~~Gkkl~Fi~Lrd~~~~iQvv~~~~~~~~~~~~~L~~gs~V~V~ 569 (658)
.+.|+|..+...| ..+-+.|.-++..+...++.... ....|..|+-|.+.
T Consensus 8 ~l~g~V~~I~~~~-~~~~V~l~~~g~~l~a~IT~~s~---~~L~L~~G~~V~a~ 57 (67)
T d1fr3a_ 8 KLEATVKEIVKGT-VMAKIVMDYKGTELVAAITIDSV---ADLDLVPGDKVTAL 57 (67)
T ss_dssp EEEEEEEEEEECS-SEEEEEEEETTEEEEEEEEHHHH---HHHTCCTTCEEEEE
T ss_pred EEEEEEEEEEECC-CeEEEEEEECCcEEEEEcCHHHH---HhcCCCCCCEEEEE
Confidence 5899999998775 67888888777778888775322 23468999988764
No 74
>d1h9ra2 b.40.6.2 (A:200-261) C-terminal domain of molybdate-dependent transcriptional regulator ModE {Escherichia coli [TaxId: 562]}
Probab=31.92 E-value=80 Score=22.32 Aligned_cols=47 Identities=13% Similarity=0.032 Sum_probs=35.3
Q ss_pred EEEEEEEeeecCCCceEEEEEEe-CCEEEEEEEcCCccchHHhccCCCCcEEEE
Q psy8087 516 TIFGWVHRLRRQGKGLMFVTLRD-GSGFIQCVLADILCQTEHALLLSTESSVQF 568 (658)
Q Consensus 516 ~v~GwI~~~R~~Gkkl~Fi~Lrd-~~~~iQvv~~~~~~~~~~~~~L~~gs~V~V 568 (658)
.+.|+|.+++..+ -.+-+.|+= ++..|..++...+ ...|..|+-|.+
T Consensus 3 ~l~G~V~~I~~g~-v~aeV~l~l~~g~~l~A~iT~~~-----~L~L~~G~~v~A 50 (62)
T d1h9ra2 3 QLPGIISHIERGA-EQCEVLMALPDGQTLCATVPVNE-----ATSLQQGQNVTA 50 (62)
T ss_dssp EEEEEEEEEECCS-SEEEEEEECTTSCEEEEEEETGG-----GTTCCTTCEEEE
T ss_pred eeEEEEEEEEECC-CceEEEEEeCCCCEEEEEEeCHH-----HcCCCCCCEEEE
Confidence 4899999999765 678888884 4556888887431 357899998875
No 75
>d1qvca_ b.40.4.3 (A:) ssDNA-binding protein {Escherichia coli [TaxId: 562]}
Probab=31.63 E-value=52 Score=27.30 Aligned_cols=61 Identities=18% Similarity=0.206 Sum_probs=37.2
Q ss_pred EEEEeEEeec---ceec--CCCeEEEEEE-c-------------CCeEEEEEEecccchhhhhhcCCCccEEEEEEEeEe
Q psy8087 72 NINIPAIPGP---PAIP--GKGLMFVTLR-D-------------GSGFIQCVLADILCQTEHALLLSTESSVQFRGRIEK 132 (658)
Q Consensus 72 ~v~~~Grv~~---~r~~--gk~l~Fi~Lr-D-------------~~~~iQvv~~~~~~~~~~~~~l~~es~V~v~G~l~~ 132 (658)
.|+|.|||.+ +|.. |+.++-+.|. + .+.-+.|++-.+..+ +....|..|+.|.|+|.|..
T Consensus 7 ~v~LiG~l~~dpe~r~~~~G~~v~~f~va~~~~~~~~~~~~~~~~t~w~~v~~~g~~Ae-~~~~~l~KG~~V~V~G~l~~ 85 (145)
T d1qvca_ 7 KVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAE-VASEYLRKGSQVYIEGQLRT 85 (145)
T ss_dssp EEEEEEEESSCCEEECCSSSCCEEEEEEEECCCCSCCSSSSCCCCCEEEEEEEETHHHH-HHHHHCCTTCEEEEEEEEEE
T ss_pred EEEEEEECCCCCEEEECCCCCEEEEEEEEecccccccccccccccceEEeeEEecchhh-hHhhhcccCCEEEEEEEEEE
Confidence 4889999987 4433 4445434442 1 122366666544221 22246999999999999975
Q ss_pred C
Q psy8087 133 V 133 (658)
Q Consensus 133 ~ 133 (658)
.
T Consensus 86 ~ 86 (145)
T d1qvca_ 86 R 86 (145)
T ss_dssp E
T ss_pred e
Confidence 3
No 76
>d1guta_ b.40.6.1 (A:) Molybdate/tungstate binding protein MOP {Clostridium pasteurianum, MOP II [TaxId: 1501]}
Probab=31.16 E-value=54 Score=23.44 Aligned_cols=49 Identities=10% Similarity=-0.063 Sum_probs=35.4
Q ss_pred EEeEEeecceecCCCeEEEEEE-cCCeEEEEEEecccchhhhhhcCCCccEEEE
Q psy8087 74 NIPAIPGPPAIPGKGLMFVTLR-DGSGFIQCVLADILCQTEHALLLSTESSVQF 126 (658)
Q Consensus 74 ~~~Grv~~~r~~gk~l~Fi~Lr-D~~~~iQvv~~~~~~~~~~~~~l~~es~V~v 126 (658)
.+.|+|..+...+ ..+-+.+. +++..+...+..... +.+.|.+|+.|.+
T Consensus 7 ~l~g~V~~I~~~~-~~~~V~l~l~~g~~l~a~IT~~s~---~~L~L~~G~~V~a 56 (67)
T d1guta_ 7 QLKGKVVGLKKGV-VTAEVVLEIAGGNKITSIISLDSV---EELGVKEGAELTA 56 (67)
T ss_dssp EEEEEEEEEEECS-SEEEEEEEETTSCEEEEEEEHHHH---HHHTCCTTCEEEE
T ss_pred EEEEEEEEEEECC-CcEEEEEEeCCCCEEEEEcCHHHH---HHCCCCCCCEEEE
Confidence 6889999988644 56777777 445578888876543 3457889988875
No 77
>d1guta_ b.40.6.1 (A:) Molybdate/tungstate binding protein MOP {Clostridium pasteurianum, MOP II [TaxId: 1501]}
Probab=28.66 E-value=62 Score=23.09 Aligned_cols=50 Identities=16% Similarity=0.079 Sum_probs=35.3
Q ss_pred EEEEEEEeeecCCCceEEEEEE-eCCEEEEEEEcCCccchHHhccCCCCcEEEEE
Q psy8087 516 TIFGWVHRLRRQGKGLMFVTLR-DGSGFIQCVLADILCQTEHALLLSTESSVQFR 569 (658)
Q Consensus 516 ~v~GwI~~~R~~Gkkl~Fi~Lr-d~~~~iQvv~~~~~~~~~~~~~L~~gs~V~V~ 569 (658)
.+.|+|..++..+ ..+-+.|. +++..+...++.... .-..|..|+.|.+.
T Consensus 7 ~l~g~V~~I~~~~-~~~~V~l~l~~g~~l~a~IT~~s~---~~L~L~~G~~V~a~ 57 (67)
T d1guta_ 7 QLKGKVVGLKKGV-VTAEVVLEIAGGNKITSIISLDSV---EELGVKEGAELTAV 57 (67)
T ss_dssp EEEEEEEEEEECS-SEEEEEEEETTSCEEEEEEEHHHH---HHHTCCTTCEEEEE
T ss_pred EEEEEEEEEEECC-CcEEEEEEeCCCCEEEEEcCHHHH---HHCCCCCCCEEEEE
Confidence 4899999998865 57777777 355568877775321 23468999988763
No 78
>d1h9ma1 b.40.6.2 (A:1-73) Cytoplasmic molybdate-binding protein ModG {Azotobacter vinelandii [TaxId: 354]}
Probab=27.79 E-value=70 Score=23.19 Aligned_cols=50 Identities=18% Similarity=0.068 Sum_probs=36.1
Q ss_pred EEEEEEEeeecCCCceEEEEEEe-CCEEEEEEEcCCccchHHhccCCCCcEEEEE
Q psy8087 516 TIFGWVHRLRRQGKGLMFVTLRD-GSGFIQCVLADILCQTEHALLLSTESSVQFR 569 (658)
Q Consensus 516 ~v~GwI~~~R~~Gkkl~Fi~Lrd-~~~~iQvv~~~~~~~~~~~~~L~~gs~V~V~ 569 (658)
.+.|+|..++..+ ..+.+.+.- ++..+...++... .....|..|+.|.+.
T Consensus 8 ~l~g~V~~I~~~~-~~~~V~l~~~~g~~l~A~IT~~S---~~~L~L~~G~~V~a~ 58 (73)
T d1h9ma1 8 VFKGTVSALKEGA-VNAEVDILLGGGDKLAAVVTLES---ARSLQLAAGKEVVAV 58 (73)
T ss_dssp EEEEEEEEEEECS-SEEEEEEEESSSCEEEEEEEHHH---HHHTTCCTTCEEEEE
T ss_pred EEEEEEEEEEeCC-CCEEEEEEECCCCEEEEEcCHHH---HhhCCCCCCCEEEEE
Confidence 5899999999876 678888874 5556777776532 223468999988764
No 79
>d1j6qa_ b.40.9.1 (A:) Heme chaperone CcmE {Shewanella putrefaciens [TaxId: 24]}
Probab=27.08 E-value=1.3e+02 Score=23.31 Aligned_cols=58 Identities=16% Similarity=0.167 Sum_probs=42.4
Q ss_pred cCCcEEEEeEEeec--ceecCC--CeEEEEEEcCC-eEEEEEEecccchhhhhhcCCCccEEEEEEEeE
Q psy8087 68 YIITNINIPAIPGP--PAIPGK--GLMFVTLRDGS-GFIQCVLADILCQTEHALLLSTESSVQFRGRIE 131 (658)
Q Consensus 68 ~~~~~v~~~Grv~~--~r~~gk--~l~Fi~LrD~~-~~iQvv~~~~~~~~~~~~~l~~es~V~v~G~l~ 131 (658)
..++.++|-|.|.. +.+... .+.| .|.|+. ..|.|..+.-.. + .++.|.-|.|+|.+.
T Consensus 24 ~~~~~iRvGG~V~~gSi~~~~~~~~~~F-~itD~~~~~i~V~Y~G~lP-d----lF~eg~gVVveG~~~ 86 (100)
T d1j6qa_ 24 EAGQRIRVGGMVTVGSMVRDPNSLHVQF-AVHDSLGGEILVTYDDLLP-D----LFREGQGIVAQGVLG 86 (100)
T ss_dssp CTTCEEEEEEEECTTCCEECTTSSCEEE-EEECTTCCCEEEEECSCCT-T----SCCSSSEEEEEEEEC
T ss_pred cCCCEEEEeeEEeeeEEEecCCccEEEE-EEcCCceeEEEEEeCCCCC-c----hhcCCCeEEEEEEEC
Confidence 35789999999984 555433 4677 578975 569998876432 2 367899999999986
No 80
>d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=26.28 E-value=22 Score=34.13 Aligned_cols=28 Identities=18% Similarity=0.274 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHhhcCCcEEecCC
Q psy8087 631 RVLLMRSVLLQALRAHFADRNYTEVNIE 658 (658)
Q Consensus 631 ~ifr~Rs~i~~~iR~fL~~~gF~EVeTp 658 (658)
+..++.-++++++.+++.++||+||.||
T Consensus 54 ~~a~Le~AL~~~~ld~~~~~gy~~v~~P 81 (311)
T d1seta2 54 DLALYELALLRFAMDFMARRGFLPMTLP 81 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHHHHhhhcccceEEeec
Confidence 4456778899999999999999999998
No 81
>d1h9ra1 b.40.6.2 (A:123-199) C-terminal domain of molybdate-dependent transcriptional regulator ModE {Escherichia coli [TaxId: 562]}
Probab=25.55 E-value=65 Score=23.70 Aligned_cols=49 Identities=12% Similarity=-0.010 Sum_probs=34.8
Q ss_pred EEeEEeecceecCCCeEEEEEE--cCCeEEEEEEecccchhhhhhcCCCccEEEE
Q psy8087 74 NIPAIPGPPAIPGKGLMFVTLR--DGSGFIQCVLADILCQTEHALLLSTESSVQF 126 (658)
Q Consensus 74 ~~~Grv~~~r~~gk~l~Fi~Lr--D~~~~iQvv~~~~~~~~~~~~~l~~es~V~v 126 (658)
.+.|+|..+...+ ..+.+.|. ++...|...+..... ..+.|..|+.|.+
T Consensus 8 ~l~g~V~~I~~~~-~~~~V~v~l~~g~~~l~A~IT~~S~---~~L~L~~G~~V~a 58 (77)
T d1h9ra1 8 QWFGTITARDHDD-VQQHVDVLLADGKTRLKVAITAQSG---ARLGLDEGKEVLI 58 (77)
T ss_dssp EEEEEEEEECCCS-SEEEEEEEETTSSCEEEEEEEHHHH---HHHTCCTTCEEEE
T ss_pred EEEEEEEEEEECC-CcEEEEEEECCCCEEEEEEeCHHHH---HhcCCCCCCEEEE
Confidence 6899999987655 45676665 455578888876543 3457889998875
No 82
>d1h9ma1 b.40.6.2 (A:1-73) Cytoplasmic molybdate-binding protein ModG {Azotobacter vinelandii [TaxId: 354]}
Probab=24.91 E-value=76 Score=22.97 Aligned_cols=49 Identities=12% Similarity=-0.049 Sum_probs=36.0
Q ss_pred EEeEEeecceecCCCeEEEEEEc-CCeEEEEEEecccchhhhhhcCCCccEEEE
Q psy8087 74 NIPAIPGPPAIPGKGLMFVTLRD-GSGFIQCVLADILCQTEHALLLSTESSVQF 126 (658)
Q Consensus 74 ~~~Grv~~~r~~gk~l~Fi~LrD-~~~~iQvv~~~~~~~~~~~~~l~~es~V~v 126 (658)
.+.|+|..++..+ ..+.+.+.- ++..+...+.... ...+.|..|+.|.+
T Consensus 8 ~l~g~V~~I~~~~-~~~~V~l~~~~g~~l~A~IT~~S---~~~L~L~~G~~V~a 57 (73)
T d1h9ma1 8 VFKGTVSALKEGA-VNAEVDILLGGGDKLAAVVTLES---ARSLQLAAGKEVVA 57 (73)
T ss_dssp EEEEEEEEEEECS-SEEEEEEEESSSCEEEEEEEHHH---HHHTTCCTTCEEEE
T ss_pred EEEEEEEEEEeCC-CCEEEEEEECCCCEEEEEcCHHH---HhhCCCCCCCEEEE
Confidence 6889999988765 468888874 4556888887653 33457889998875
No 83
>d1h9ra1 b.40.6.2 (A:123-199) C-terminal domain of molybdate-dependent transcriptional regulator ModE {Escherichia coli [TaxId: 562]}
Probab=24.84 E-value=72 Score=23.43 Aligned_cols=50 Identities=16% Similarity=0.122 Sum_probs=34.5
Q ss_pred EEEEEEEeeecCCCceEEEEEE--eCCEEEEEEEcCCccchHHhccCCCCcEEEEE
Q psy8087 516 TIFGWVHRLRRQGKGLMFVTLR--DGSGFIQCVLADILCQTEHALLLSTESSVQFR 569 (658)
Q Consensus 516 ~v~GwI~~~R~~Gkkl~Fi~Lr--d~~~~iQvv~~~~~~~~~~~~~L~~gs~V~V~ 569 (658)
.+.|+|..+...+ ..+.+.|. +|+..|...++.... ....|..|+-|.+.
T Consensus 8 ~l~g~V~~I~~~~-~~~~V~v~l~~g~~~l~A~IT~~S~---~~L~L~~G~~V~a~ 59 (77)
T d1h9ra1 8 QWFGTITARDHDD-VQQHVDVLLADGKTRLKVAITAQSG---ARLGLDEGKEVLIL 59 (77)
T ss_dssp EEEEEEEEECCCS-SEEEEEEEETTSSCEEEEEEEHHHH---HHHTCCTTCEEEEE
T ss_pred EEEEEEEEEEECC-CcEEEEEEECCCCEEEEEEeCHHHH---HhcCCCCCCEEEEE
Confidence 4899999998775 46666665 444568887775321 23468999988763
No 84
>d1h9ra2 b.40.6.2 (A:200-261) C-terminal domain of molybdate-dependent transcriptional regulator ModE {Escherichia coli [TaxId: 562]}
Probab=24.06 E-value=1.1e+02 Score=21.46 Aligned_cols=47 Identities=13% Similarity=-0.028 Sum_probs=34.3
Q ss_pred EEeEEeecceecCCCeEEEEEEc-CCeEEEEEEecccchhhhhhcCCCccEEEE
Q psy8087 74 NIPAIPGPPAIPGKGLMFVTLRD-GSGFIQCVLADILCQTEHALLLSTESSVQF 126 (658)
Q Consensus 74 ~~~Grv~~~r~~gk~l~Fi~LrD-~~~~iQvv~~~~~~~~~~~~~l~~es~V~v 126 (658)
.+.|+|..+++.+ -.+-+.|+= ++..|..++.... ...|..|+.|.+
T Consensus 3 ~l~G~V~~I~~g~-v~aeV~l~l~~g~~l~A~iT~~~-----~L~L~~G~~v~A 50 (62)
T d1h9ra2 3 QLPGIISHIERGA-EQCEVLMALPDGQTLCATVPVNE-----ATSLQQGQNVTA 50 (62)
T ss_dssp EEEEEEEEEECCS-SEEEEEEECTTSCEEEEEEETGG-----GTTCCTTCEEEE
T ss_pred eeEEEEEEEEECC-CceEEEEEeCCCCEEEEEEeCHH-----HcCCCCCCEEEE
Confidence 5789999988654 568888884 4556888887542 356888888764
No 85
>d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=24.04 E-value=18 Score=34.56 Aligned_cols=48 Identities=21% Similarity=0.280 Sum_probs=31.5
Q ss_pred eEEEEEeC-Cc-ceeeeceeccCCHHHHHHHHHHcCCCCCCCcchHHHhhcCCCCccceecchhHHHHHHh
Q psy8087 365 ESVDVLFP-NV-GEVIGGSMRIWDPEELLAGYKREGIDPAPYYWYTDQRKYGSTPHGGYGLGLERVLCWLL 433 (658)
Q Consensus 365 ~~fdL~~~-G~-~Ei~~G~~r~~d~~~~~~~~~~~g~~~~~~~~yl~a~~~G~pP~gG~GiGidRL~m~l~ 433 (658)
--|+++.. |. +.||+|+. |+.+.+.|... --|.-||+||+|||..+|-
T Consensus 271 ivFe~~~~~~~~~~i~~GGR----YD~L~~~f~g~-----------------~~pAvGfsl~~~~l~~~l~ 320 (327)
T d1wu7a2 271 IVFEAYDRSGQFRAILGGGR----YDNLASLMSGE-----------------SVPAVGFGMGDAVISLLLK 320 (327)
T ss_dssp EEEEEEETTSSCSCSSEEEE----CTTHHHHHHSC-----------------CCCEEEEEEEHHHHHHHHH
T ss_pred eEEEEEecCCCcceeeeccc----chHHHHhcCCC-----------------CCCeEEEEeeHHHHHHHHH
Confidence 36888885 43 35888765 23344444311 1368899999999988764
No 86
>d1fr3a_ b.40.6.1 (A:) Molybdate/tungstate binding protein MOP {Sporomusa ovata [TaxId: 2378]}
Probab=23.06 E-value=97 Score=21.90 Aligned_cols=49 Identities=8% Similarity=-0.102 Sum_probs=36.6
Q ss_pred EEeEEeecceecCCCeEEEEEEcCCeEEEEEEecccchhhhhhcCCCccEEEE
Q psy8087 74 NIPAIPGPPAIPGKGLMFVTLRDGSGFIQCVLADILCQTEHALLLSTESSVQF 126 (658)
Q Consensus 74 ~~~Grv~~~r~~gk~l~Fi~LrD~~~~iQvv~~~~~~~~~~~~~l~~es~V~v 126 (658)
.+.|+|..+... +..+-+.|.-++..+...+.... ++.+.|..|+.|.+
T Consensus 8 ~l~g~V~~I~~~-~~~~~V~l~~~g~~l~a~IT~~s---~~~L~L~~G~~V~a 56 (67)
T d1fr3a_ 8 KLEATVKEIVKG-TVMAKIVMDYKGTELVAAITIDS---VADLDLVPGDKVTA 56 (67)
T ss_dssp EEEEEEEEEEEC-SSEEEEEEEETTEEEEEEEEHHH---HHHHTCCTTCEEEE
T ss_pred EEEEEEEEEEEC-CCeEEEEEEECCcEEEEEcCHHH---HHhcCCCCCCEEEE
Confidence 688999998765 45788888767777888887653 33457889998875
No 87
>d1h9ma2 b.40.6.2 (A:74-141) Cytoplasmic molybdate-binding protein ModG {Azotobacter vinelandii [TaxId: 354]}
Probab=21.88 E-value=1e+02 Score=21.80 Aligned_cols=50 Identities=20% Similarity=0.070 Sum_probs=34.1
Q ss_pred EEEEEEEeeecCCCceEEEEEEe-CCEEEEEEEcCCccchHHhccCCCCcEEEEE
Q psy8087 516 TIFGWVHRLRRQGKGLMFVTLRD-GSGFIQCVLADILCQTEHALLLSTESSVQFR 569 (658)
Q Consensus 516 ~v~GwI~~~R~~Gkkl~Fi~Lrd-~~~~iQvv~~~~~~~~~~~~~L~~gs~V~V~ 569 (658)
.+.|+|..+...+ ..+-+.|.- ++..+...++... .....|..|+-|.+.
T Consensus 7 ~l~g~V~~I~~~~-~~~~V~l~~~~g~~l~a~IT~~s---~~~L~L~~G~~V~a~ 57 (68)
T d1h9ma2 7 ILTGTVKTIETGA-VNAEVTLALQGGTEITSMVTKEA---VAELGLKPGASASAV 57 (68)
T ss_dssp EEEEEEEEEEECS-SEEEEEEEETTSCEEEEEEEHHH---HHHTTCCTTCEEEEE
T ss_pred EEEEEEEEEEECC-CcEEEEEEeCCCCEEEEEeCHHH---HhhCCCCCCCEEEEE
Confidence 5899999998764 566677763 4456777776432 123468999988763
No 88
>d1h9ma2 b.40.6.2 (A:74-141) Cytoplasmic molybdate-binding protein ModG {Azotobacter vinelandii [TaxId: 354]}
Probab=21.54 E-value=1e+02 Score=21.78 Aligned_cols=49 Identities=16% Similarity=-0.000 Sum_probs=34.2
Q ss_pred EEeEEeecceecCCCeEEEEEE-cCCeEEEEEEecccchhhhhhcCCCccEEEE
Q psy8087 74 NIPAIPGPPAIPGKGLMFVTLR-DGSGFIQCVLADILCQTEHALLLSTESSVQF 126 (658)
Q Consensus 74 ~~~Grv~~~r~~gk~l~Fi~Lr-D~~~~iQvv~~~~~~~~~~~~~l~~es~V~v 126 (658)
.+.|+|..+... +..+-+.|. +++..+...+.... .....|..|+.|.+
T Consensus 7 ~l~g~V~~I~~~-~~~~~V~l~~~~g~~l~a~IT~~s---~~~L~L~~G~~V~a 56 (68)
T d1h9ma2 7 ILTGTVKTIETG-AVNAEVTLALQGGTEITSMVTKEA---VAELGLKPGASASA 56 (68)
T ss_dssp EEEEEEEEEEEC-SSEEEEEEEETTSCEEEEEEEHHH---HHHTTCCTTCEEEE
T ss_pred EEEEEEEEEEEC-CCcEEEEEEeCCCCEEEEEeCHHH---HhhCCCCCCCEEEE
Confidence 688999998864 456667776 34446888777653 33457888988875
Done!