BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8093
(148 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus
GN=ELOVL7 PE=2 SV=1
Length = 281
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 70 CDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVAQMTCNF 129
DPR++++ LM +P+P + L Y++FV LGPKLMENRKPF L ++ YN + + +
Sbjct: 21 ADPRVEDWLLMSSPLPQTIILGFYVYFVTSLGPKLMENRKPFELKKVMITYNFSIVLFSV 80
Query: 130 YLVY 133
Y+ Y
Sbjct: 81 YMFY 84
>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus musculus
GN=Elovl7 PE=2 SV=1
Length = 281
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 70 CDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVAQMTCNF 129
DPR+++Y LM +P+P + L Y++FV LGPKLMENRKPF L A +T NF
Sbjct: 21 ADPRVEDYLLMSSPLPQTIILGLYVYFVTSLGPKLMENRKPFELKK-------AMITYNF 73
Query: 130 YLVYVQWNNCY 140
++V CY
Sbjct: 74 FIVLFSVYMCY 84
>sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo sapiens
GN=ELOVL7 PE=1 SV=1
Length = 281
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 70 CDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVAQMTCNF 129
DPR++++ LM +P+P + L Y++FV LGPKLMENRKPF L A +T NF
Sbjct: 21 ADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRKPFELKK-------AMITYNF 73
Query: 130 YLVYVQWNNCY 140
++V CY
Sbjct: 74 FIVLFSVYMCY 84
>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus
norvegicus GN=Elovl7 PE=3 SV=1
Length = 281
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 70 CDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVAQMTCNF 129
DPR++ + LM +P+P + L Y++FV LGPKLMENRKPF L A +T NF
Sbjct: 21 ADPRVENWLLMSSPLPQTIILGLYVYFVTSLGPKLMENRKPFELKK-------AMITYNF 73
Query: 130 YLVYVQWNNCY 140
++V CY
Sbjct: 74 FIVLFSVYMCY 84
>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004
OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2
Length = 358
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 71 DPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVAQMTCNFY 130
DPR K++ LM +P P L Y++ V LGP+LMENRKPF L + +YN Q+ + +
Sbjct: 20 DPRTKDWPLMSSPFPTLALCLGYVYLVKVLGPRLMENRKPFQLRNTLILYNFVQVVFSAW 79
Query: 131 LVY 133
L Y
Sbjct: 80 LFY 82
>sp|Q9BW60|ELOV1_HUMAN Elongation of very long chain fatty acids protein 1 OS=Homo sapiens
GN=ELOVL1 PE=1 SV=1
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 70 CDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVAQMTCNF 129
DPR++ Y LM +P+ M L +Y++FV LGP++M NRKPF L + +YN + + +
Sbjct: 15 ADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRGFMIVYNFSLVALSL 74
Query: 130 YLVY 133
Y+VY
Sbjct: 75 YIVY 78
>sp|Q9JLJ5|ELOV1_MOUSE Elongation of very long chain fatty acids protein 1 OS=Mus musculus
GN=Elovl1 PE=2 SV=1
Length = 279
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 70 CDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVAQMTCNF 129
DPR++ Y LM +P+ + L +Y++F+ LGP++M NRKPF L + +YN + + +
Sbjct: 15 ADPRIQSYPLMGSPLLITSILLTYVYFILSLGPRIMANRKPFQLRGFMIVYNFSLVILSL 74
Query: 130 YLVY 133
Y+VY
Sbjct: 75 YIVY 78
>sp|Q8BHI7|ELOV5_MOUSE Elongation of very long chain fatty acids protein 5 OS=Mus musculus
GN=Elovl5 PE=1 SV=1
Length = 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 62 KFIGPELGCDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYN 121
F+GP D R+K +FL+D +P V Y+ V +LGPK M+NR+PF+ I+++YN
Sbjct: 14 AFLGPR---DTRVKGWFLLDNYIPTFVCSVIYLLIV-WLGPKYMKNRQPFSCRGILQLYN 69
Query: 122 VAQMTCNFYLVY 133
+ + Y+ Y
Sbjct: 70 LGLTLLSLYMFY 81
>sp|Q32NI8|ELOV5_XENLA Elongation of very long chain fatty acids protein 5 OS=Xenopus
laevis GN=elovl5 PE=2 SV=1
Length = 295
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 60 ILKFIGPELGCDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKI 119
I +GP+ DPR+K + L+D VP + A Y+F V + GPK M+NR+P + +I+ +
Sbjct: 12 IDHLLGPK---DPRVKGWLLLDNYVPTIFFTALYLFIV-WRGPKYMQNRQPVSCRSILVV 67
Query: 120 YNVAQMTCNFYLVY 133
YN+ +FY+ Y
Sbjct: 68 YNLGLTLLSFYMFY 81
>sp|Q920L7|ELOV5_RAT Elongation of very long chain fatty acids protein 5 OS=Rattus
norvegicus GN=Elovl5 PE=2 SV=1
Length = 299
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 64 IGPELGCDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVA 123
+GP D R+K +FL+D +P V A Y+ V +LGPK M+NR+PF+ I+ +YN+
Sbjct: 16 LGPR---DTRVKGWFLLDNYIPTFVCSAIYLLIV-WLGPKYMKNRQPFSCRGILVVYNLG 71
Query: 124 QMTCNFYLVY 133
+ Y+ Y
Sbjct: 72 LTLLSLYMFY 81
>sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca
mulatta GN=ELOVL4 PE=3 SV=1
Length = 314
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 70 CDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVAQMTCNF 129
D R++ + LM +P P L Y+ FV +LGPK M++R+PF + ++ IYN + NF
Sbjct: 33 ADKRVENWPLMQSPWPTLSISTLYLLFV-WLGPKWMKDREPFQMRLVLIIYNFGMVLLNF 91
Query: 130 YL 131
++
Sbjct: 92 FI 93
>sp|Q95K73|ELOV4_MACFA Elongation of very long chain fatty acids protein 4 OS=Macaca
fascicularis GN=ELOVL4 PE=2 SV=1
Length = 314
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 70 CDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVAQMTCNF 129
D R++ + LM +P P L Y+ FV +LGPK M++R+PF + ++ IYN + NF
Sbjct: 33 ADKRVENWPLMQSPWPTLSISTLYLLFV-WLGPKWMKDREPFQMRLVLIIYNFGMVLLNF 91
Query: 130 YL 131
++
Sbjct: 92 FI 93
>sp|Q5M8U1|ELOV5_XENTR Elongation of very long chain fatty acids protein 5 OS=Xenopus
tropicalis GN=elovl5 PE=2 SV=1
Length = 295
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 60 ILKFIGPELGCDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKI 119
I +GP+ DPR++ + L+D VP ++ A Y+F V + GPK M+NR P + I+ +
Sbjct: 12 IDHLLGPK---DPRVRGWLLLDNYVPTILFTALYLFIV-WRGPKYMQNRPPVSCRGILVV 67
Query: 120 YNVAQMTCNFYLVY 133
YN+ + Y+ Y
Sbjct: 68 YNLGLTLLSLYMFY 81
>sp|Q2KJD9|ELOV5_BOVIN Elongation of very long chain fatty acids protein 5 OS=Bos taurus
GN=ELOVL5 PE=2 SV=1
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 62 KFIGPELGCDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYN 121
++GP D R++ +FL+D VP LV Y+ V +LGPK M+ R+PF+ I+ +YN
Sbjct: 14 AWLGPR---DTRVEGWFLLDNYVPTLVCSILYLLIV-WLGPKYMKTRQPFSCRGILVVYN 69
Query: 122 VAQMTCNFYL 131
+ + Y+
Sbjct: 70 LGLTLLSLYM 79
>sp|Q5RFL5|ELOV5_PONAB Elongation of very long chain fatty acids protein 5 OS=Pongo abelii
GN=ELOVL5 PE=2 SV=1
Length = 299
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 62 KFIGPELGCDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYN 121
++GP D R+K +FL+D +P + Y+ V +LGPK M N++PF+ I+ +YN
Sbjct: 14 AWLGPR---DTRVKGWFLLDNYIPTFICSVIYLLIV-WLGPKYMRNKQPFSCRGILVVYN 69
Query: 122 VAQMTCNFYL 131
+ + Y+
Sbjct: 70 LGLTLLSLYM 79
>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens
GN=ELOVL4 PE=1 SV=1
Length = 314
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 70 CDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVAQMTCNF 129
D R++ + LM +P P L Y+ FV +LGPK M++R+PF + ++ IYN + N
Sbjct: 33 ADKRVENWPLMQSPWPTLSISTLYLLFV-WLGPKWMKDREPFQMRLVLIIYNFGMVLLNL 91
Query: 130 YL 131
++
Sbjct: 92 FI 93
>sp|Q4R516|ELOV5_MACFA Elongation of very long chain fatty acids protein 5 OS=Macaca
fascicularis GN=ELOVL5 PE=2 SV=1
Length = 299
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 64 IGPELGCDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVA 123
+GP D R+K +FL+D +P + Y+ V +LGPK M N++PF+ I+ +YN+
Sbjct: 16 LGPR---DTRVKGWFLLDNYIPTFICSVIYLLIV-WLGPKYMRNKQPFSCRGILVVYNLG 71
Query: 124 QMTCNFYL 131
+ Y+
Sbjct: 72 LTLLSLYM 79
>sp|Q9NYP7|ELOV5_HUMAN Elongation of very long chain fatty acids protein 5 OS=Homo sapiens
GN=ELOVL5 PE=1 SV=1
Length = 299
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 64 IGPELGCDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVA 123
+GP D R+K +FL+D +P + Y+ V +LGPK M N++PF+ I+ +YN+
Sbjct: 16 LGPR---DTRVKGWFLLDNYIPTFICSVIYLLIV-WLGPKYMRNKQPFSCRGILVVYNLG 71
Query: 124 QMTCNFYL 131
+ Y+
Sbjct: 72 LTLLSLYM 79
>sp|Q9EQC4|ELOV4_MOUSE Elongation of very long chain fatty acids protein 4 OS=Mus musculus
GN=Elovl4 PE=1 SV=2
Length = 312
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 70 CDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVAQMTCNF 129
D R+ ++ LM +P P + Y+ FV +LGPK M++R+PF + ++ IYN + N
Sbjct: 33 ADKRVADWPLMQSPWPTISISTLYLLFV-WLGPKWMKDREPFQMRLVLIIYNFGMVLLNL 91
Query: 130 YL 131
++
Sbjct: 92 FI 93
>sp|Q9JLJ4|ELOV2_MOUSE Elongation of very long chain fatty acids protein 2 OS=Mus musculus
GN=Elovl2 PE=2 SV=1
Length = 292
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 71 DPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVAQMTCNFY 130
D R++ +FL+D+ +P + +Y+ + +LG K M+NR +L I+ +YN+A + Y
Sbjct: 23 DSRVRGWFLLDSYLPTFILTITYLLSI-WLGNKYMKNRPALSLRGILTLYNLAITLLSAY 81
Query: 131 LV 132
++
Sbjct: 82 ML 83
>sp|Q9NXB9|ELOV2_HUMAN Elongation of very long chain fatty acids protein 2 OS=Homo sapiens
GN=ELOVL2 PE=2 SV=2
Length = 296
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 71 DPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVAQMTCNFY 130
D R++ +F++D+ +P Y+ + +LG K M+NR +L I+ +YN+ + Y
Sbjct: 23 DSRVRGWFMLDSYLPTFFLTVMYLLSI-WLGNKYMKNRPALSLRGILTLYNLGITLLSAY 81
Query: 131 LV 132
++
Sbjct: 82 ML 83
>sp|P03278|CAPSH_ADEB3 Hexon protein OS=Bovine adenovirus B serotype 3 GN=L3 PE=2 SV=1
Length = 911
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 56 YLVDILKFIGPELGCDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFN 112
YL D LKF + P Y M+ +P+ + +Y+ P +M+N PFN
Sbjct: 442 YLPDNLKFTPHNIQLPPNTNTYEYMNGRIPVSGLIDTYVNIGTRWSPDVMDNVNPFN 498
>sp|Q9YTR8|CAPSH_ADEP3 Hexon protein OS=Porcine adenovirus A serotype 3 PE=2 SV=1
Length = 939
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 56 YLVDILKFIGPELGCDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFN 112
YL D KF P + DP Y ++ +P+ + +++ P +M+N PFN
Sbjct: 464 YLPDKYKFSPPNVPIDPNTHSYDYINKRLPLNNLIDTFVNIGARWSPDVMDNVNPFN 520
>sp|Q0BB53|FLGH_BURCM Flagellar L-ring protein OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=flgH PE=3 SV=1
Length = 229
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 71 DPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKI 119
DP +++ P+PM + I+ Y G L E+++P N+ I+ I
Sbjct: 32 DPIIQQPMTAQPPMPMSMQAPGSIYNPGYAGRPLFEDQRPRNIGDILTI 80
>sp|A0KB90|FLGH_BURCH Flagellar L-ring protein OS=Burkholderia cenocepacia (strain
HI2424) GN=flgH PE=3 SV=1
Length = 229
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 71 DPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKI 119
DP +++ P+PM + I+ Y G L E+++P N+ I+ I
Sbjct: 32 DPIIQQPMTAQPPMPMSMQAPGSIYNPGYAGRPLFEDQRPRNIGDILTI 80
>sp|Q1BSV1|FLGH_BURCA Flagellar L-ring protein OS=Burkholderia cenocepacia (strain AU
1054) GN=flgH PE=3 SV=1
Length = 229
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 71 DPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKI 119
DP +++ P+PM + I+ Y G L E+++P N+ I+ I
Sbjct: 32 DPIIQQPMTAQPPMPMSMQAPGSIYNPGYAGRPLFEDQRPRNIGDILTI 80
>sp|B1YPA0|FLGH_BURA4 Flagellar L-ring protein OS=Burkholderia ambifaria (strain MC40-6)
GN=flgH PE=3 SV=1
Length = 229
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 71 DPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKI 119
DP +++ P+PM + I+ Y G L E+++P N+ I+ I
Sbjct: 32 DPIIQQPMTAQPPMPMSMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTI 80
>sp|Q39C57|FLGH_BURS3 Flagellar L-ring protein OS=Burkholderia sp. (strain 383) GN=flgH
PE=3 SV=1
Length = 230
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 71 DPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKI 119
DP +++ P PM + I+ Y G L E+++P N+ I+ I
Sbjct: 33 DPIIQQPMTAQPPTPMSMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTI 81
>sp|Q3KSU8|DEN_EBVG Deneddylase BPLF1 OS=Epstein-Barr virus (strain GD1) GN=BPLF1 PE=3
SV=1
Length = 3176
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 67 ELGCDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLS 114
E CDP Y DT P L + Y F+ Y+ P ++EN + F+L+
Sbjct: 2049 ESPCDPLNPAYVSADTQEP-LNYIPVYHNFLEYVMPTVLENPEAFSLT 2095
>sp|Q1HVH9|DEN_EBVA8 Deneddylase BPLF1 OS=Epstein-Barr virus (strain AG876) GN=BPLF1 PE=3
SV=1
Length = 3154
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 67 ELGCDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLS 114
E CDP Y DT P L + Y F+ Y+ P ++EN + F+L+
Sbjct: 2027 ESPCDPLNPAYVSADTQEP-LNYIPVYHNFLEYVMPTVLENPEAFSLT 2073
>sp|P03186|DEN_EBVB9 Deneddylase BPLF1 OS=Epstein-Barr virus (strain B95-8) GN=BPLF1 PE=1
SV=1
Length = 3149
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 67 ELGCDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLS 114
E CDP Y DT P L + Y F+ Y+ P ++EN + F+L+
Sbjct: 2022 ESPCDPLNPAYVSADTQEP-LNYIPVYHNFLEYVMPTVLENPEAFSLT 2068
>sp|Q70D38|MATK_NICAC Maturase K OS=Nicotiana acuminata GN=matK PE=3 SV=1
Length = 509
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 69 GCDPRMKEYFLMDTPVPMLVTLASYIFFVNYLGPKLMENRKPFNLSTIIKIYNVAQMTCN 128
G R+ E F D V + + ++ +V Y G ++ ++ F L K Y V C+
Sbjct: 253 GKIERLVEVFAKDFQVTLWLFKDPFMHYVRYQGKSILASKGTFLLMNKWKFYLVNFWQCH 312
Query: 129 FYLVY 133
FYL +
Sbjct: 313 FYLCF 317
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.462
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,411,824
Number of Sequences: 539616
Number of extensions: 2296004
Number of successful extensions: 4933
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4888
Number of HSP's gapped (non-prelim): 46
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)