BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8106
(196 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9W2H1|TM2D1_DROME TM2 domain-containing protein CG10795 OS=Drosophila melanogaster
GN=CG10795 PE=2 SV=1
Length = 178
Score = 219 bits (557), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/165 (63%), Positives = 128/165 (77%), Gaps = 3/165 (1%)
Query: 25 NKVNYTTNCETLRLGQYICPDPDPKYEYIDRKTQQPKNCTKENLARVRCIAADNIICLET 84
+++N N E +GQ++CPDP ID KTQQ CT+E ARV CIAA+ I C ET
Sbjct: 17 HQINVDCN-ELQMMGQFMCPDP--ARGQIDPKTQQLAGCTREGRARVWCIAANEINCTET 73
Query: 85 GNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYL 144
GN+TF +++ C+WTNGY +T +LLS+FLGMFG DRFYLGYP +GLLKFCTLG M +G L
Sbjct: 74 GNATFTREVPCKWTNGYHLDTTLLLSVFLGMFGVDRFYLGYPGIGLLKFCTLGGMFLGQL 133
Query: 145 VDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNETYRVPQDDW 189
+DI+LIA Q+VGPADGS Y+IPYYGAGI IVRSDN TYR+P+DDW
Sbjct: 134 IDIVLIALQVVGPADGSAYVIPYYGAGIHIVRSDNTTYRLPRDDW 178
>sp|Q9BX74|TM2D1_HUMAN TM2 domain-containing protein 1 OS=Homo sapiens GN=TM2D1 PE=1 SV=1
Length = 207
Score = 163 bits (413), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 108/164 (65%), Gaps = 15/164 (9%)
Query: 32 NCETLRLGQYICPDPDPKYEYIDRKTQQPKNCTKENLARVRCIAADNIICLET-GNST-- 88
CE L++GQYIC DP I+ TQ+P NCT A V C A NI C ++ GN T
Sbjct: 47 KCEDLKVGQYICKDPK-----INDATQEPVNCTNYT-AHVSCFPAPNITCKDSSGNETHF 100
Query: 89 ------FYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIG 142
F+K + CR NGYS++ A+ LS+FLG GADRFYLGYPALGLLKFCT+GF IG
Sbjct: 101 TGNEVGFFKPISCRNVNGYSYKVAVALSLFLGWLGADRFYLGYPALGLLKFCTVGFCGIG 160
Query: 143 YLVDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNETYRVPQ 186
L+D ILI+ QIVGP+DGS YII YYG +T + NET+R Q
Sbjct: 161 SLIDFILISMQIVGPSDGSSYIIDYYGTRLTRLSITNETFRKTQ 204
>sp|Q99MB3|TM2D1_MOUSE TM2 domain-containing protein 1 OS=Mus musculus GN=Tm2d1 PE=2 SV=1
Length = 208
Score = 160 bits (406), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 108/166 (65%), Gaps = 15/166 (9%)
Query: 30 TTNCETLRLGQYICPDPDPKYEYIDRKTQQPKNCTKENLARVRCIAADNIICLE-TGNST 88
T CE LR+GQYIC +P I+ TQ+P NCT A V+C A I C + +GN T
Sbjct: 46 TPKCEDLRVGQYICKEPK-----INDATQEPVNCTNYT-AHVQCFPAPKITCKDLSGNET 99
Query: 89 --------FYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFML 140
F K + CR NGYS++ A+ LS+FLG GADRFYLGYPALGLLKFCT+GF
Sbjct: 100 HFTGSEVGFLKPISCRNVNGYSYKVAVALSLFLGWLGADRFYLGYPALGLLKFCTVGFCG 159
Query: 141 IGYLVDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNETYRVPQ 186
IG L+D ILI+ QIVGP+DGS YII YYG +T + NET+R Q
Sbjct: 160 IGSLIDFILISMQIVGPSDGSSYIIDYYGTRLTRLSITNETFRKTQ 205
>sp|A5PLH4|TM2D1_DANRE TM2 domain-containing protein 1 OS=Danio rerio GN=tm2d1 PE=2 SV=1
Length = 197
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 109/168 (64%), Gaps = 15/168 (8%)
Query: 28 NYTTNCETLRLGQYICPDPDPKYEYIDRKTQQPKNCTKENLARVRCIAADNIICLETGNS 87
N +C+ L LGQY+C +P ID TQ+P+ C K+ +A V C+ A NI C + +
Sbjct: 33 NDVDSCDKLHLGQYLCKEPR-----IDDATQEPETC-KDRVAWVECLPAPNISCRLSNGT 86
Query: 88 TFY---------KDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGF 138
F K + CR +GYS++ A+ LS+FLG GADRFYLGYPALGLLKFCT+GF
Sbjct: 87 QFKFSGEEVGFNKTIPCRNVSGYSYKVAVALSLFLGWIGADRFYLGYPALGLLKFCTVGF 146
Query: 139 MLIGYLVDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNETYRVPQ 186
IG LVD +LI+ QIVGP+DGS YI+ YYGA +T + NETYR Q
Sbjct: 147 CGIGSLVDFMLISMQIVGPSDGSDYIVDYYGARLTRLSITNETYRRMQ 194
>sp|Q95PJ8|TM2D3_CAEEL TM2 domain-containing protein Y66D12A.21 OS=Caenorhabditis elegans
GN=Y66D12A.21 PE=3 SV=2
Length = 179
Score = 113 bits (282), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 91/162 (56%), Gaps = 8/162 (4%)
Query: 23 SDNKVNYTTNCETLRLGQYICPDPDPKYEYIDRKTQQPKNCTKENLARVRCIAADNIICL 82
S + + T C+ L QY+C K +D TQQ C +N +V C A++I C+
Sbjct: 12 SVSASDATVKCDDLDPNQYLC-----KNYAVDTITQQSVTCAADNSIQVMCETAEHIKCV 66
Query: 83 ETGNSTFYKDM---RCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFM 139
+ C + S+ T +LLSIFLG FG DR YLGY ALGL+K +LG +
Sbjct: 67 GKDQFGIFNRTVPSACHYGAHVSYTTTVLLSIFLGFFGIDRIYLGYYALGLIKMFSLGGL 126
Query: 140 LIGYLVDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNET 181
+ +LVDIILI+ Q++GPADG+ Y + YYG ++R D+ T
Sbjct: 127 FVFWLVDIILISLQLLGPADGTAYAMAYYGPKAQMIRFDSHT 168
>sp|Q9U4H5|AMX_DROME TM2 domain-containing protein almondex OS=Drosophila melanogaster
GN=amx PE=2 SV=1
Length = 284
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 62 NCTKENLARVRCIAADNIICLETGNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGADRF 121
N + L R C +++CL GN +F +++RC WT GY + TA+L+S+ LG FGADRF
Sbjct: 184 NSATDKLFRTNCTVHHDVLCL--GNRSFTRNLRCNWTQGYRWSTALLISLTLGGFGADRF 241
Query: 122 YLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYI 164
YLG+ G+ K + G + + ++D++LI+ +GPADGS YI
Sbjct: 242 YLGHWQEGIGKLFSFGGLGVWTIIDVLLISMHYLGPADGSLYI 284
>sp|Q9BRN9|TM2D3_HUMAN TM2 domain-containing protein 3 OS=Homo sapiens GN=TM2D3 PE=2 SV=2
Length = 247
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 46 PDPKYEYIDRKTQQPKNCTKENLARVRCIAADNIICLETGNSTFYKDMRCRWTNGYSFET 105
P+ YE + + +C ++ C D++ CL GN TF K + C WT GY + T
Sbjct: 132 PETDYECTNSTSCMTVSCPRQRYP-ANCTVRDHVHCL--GNRTFPKMLYCNWTGGYKWST 188
Query: 106 AMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYI 164
A+ LSI LG FGADRFYLG GL K + G + I L+D++LI VGPADGS YI
Sbjct: 189 ALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGPADGSLYI 247
>sp|Q8BJ83|TM2D3_MOUSE TM2 domain-containing protein 3 OS=Mus musculus GN=Tm2d3 PE=2 SV=1
Length = 261
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 46 PDPKYEYIDRKTQQPKNCTKENLARVRCIAADNIICLETGNSTFYKDMRCRWTNGYSFET 105
P+ YE + T C ++ C D+I CL GN TF K + C WT GY + T
Sbjct: 146 PETDYECSNSTTCMTVACPRQRYF-ANCTVRDHIHCL--GNRTFPKLLYCNWTGGYKWST 202
Query: 106 AMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYI 164
A+ LSI LG FGADRFYLG GL K + G + I L+D++LI VGPADGS YI
Sbjct: 203 ALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGPADGSLYI 261
>sp|Q6DE06|TM2D3_XENLA TM2 domain-containing protein 3 OS=Xenopus laevis GN=tm2d3 PE=2
SV=1
Length = 247
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 77/149 (51%), Gaps = 28/149 (18%)
Query: 16 LCLWVQPSDNKVNYTTNCETLRLGQYICPDPDPKYEYIDRKTQQPKNCTKENLARVRCIA 75
C + PSD N +++C+T+ CP +Q N T C
Sbjct: 127 FCWQLPPSDYVCNLSSSCKTIS-----CP-------------RQRYNTT--------CTV 160
Query: 76 ADNIICLETGNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCT 135
D++ CL GN TF K + C WT GY + TA+ LSI LG FGADRFYLG GL K +
Sbjct: 161 LDHVHCL--GNRTFPKMLYCNWTGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFS 218
Query: 136 LGFMLIGYLVDIILIATQIVGPADGSYYI 164
G + I L+D+ LI+ VGPADGS YI
Sbjct: 219 FGGLGIWTLIDVFLISVGYVGPADGSLYI 247
>sp|Q07FZ2|TM2D3_XENTR TM2 domain-containing protein 3 OS=Xenopus tropicalis GN=tm2d3 PE=2
SV=1
Length = 247
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 76/149 (51%), Gaps = 28/149 (18%)
Query: 16 LCLWVQPSDNKVNYTTNCETLRLGQYICPDPDPKYEYIDRKTQQPKNCTKENLARVRCIA 75
C + PSD N +++C+T+ CP +Q N T C
Sbjct: 127 FCWQLPPSDYVCNLSSSCKTVS-----CP-------------RQRYNTT--------CTV 160
Query: 76 ADNIICLETGNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCT 135
D+ CL GN TF K + C WT GY + TA+ LSI LG FGADRFYLG GL K +
Sbjct: 161 LDHAHCL--GNRTFPKMLYCNWTGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFS 218
Query: 136 LGFMLIGYLVDIILIATQIVGPADGSYYI 164
G + I L+D+ LI+ VGPADGS YI
Sbjct: 219 FGGLGIWTLIDVFLISVGYVGPADGSLYI 247
>sp|Q95QZ5|TM2D2_CAEEL TM2 domain-containing protein C41D11.9 OS=Caenorhabditis elegans
GN=C41D11.9 PE=3 SV=1
Length = 195
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Query: 54 DRKTQQPKNCTKEN--LARVRCIAADNIICLETGNSTFYKDMRCRWTNGYSFETAMLLSI 111
D + NC+ + L +C A ++IC+ G FYK + C W++GYS+ M+LS+
Sbjct: 85 DYDCEPATNCSTSSTKLLVTKCSAHSSVICM--GQRNFYKRIPCNWSSGYSWTKTMILSV 142
Query: 112 FLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYI 164
LG FGADRFYLG + K + G + + LVD++LIA + P DGS YI
Sbjct: 143 VLGGFGADRFYLGLWKSAIGKLFSFGGLGVWTLVDVVLIAVGYIKPYDGSMYI 195
>sp|A5PLF5|TM2D3_DANRE TM2 domain-containing protein 3 OS=Danio rerio GN=tm2d3 PE=2 SV=2
Length = 244
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 56 KTQQPKNCTKENLARVR----CIAADNIICLETGNSTFYKDMRCRWTNGYSFETAMLLSI 111
+ +C + R R C +++ CL G F K + C WT GY + TA+ LSI
Sbjct: 134 RCSNSSDCMTVSCPRRRYNASCEVLEHVHCL--GKRVFQKRLFCNWTGGYKWSTALALSI 191
Query: 112 FLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYI 164
LG FGADRFYLG GL K + G + I L+D++LI VGPADGS YI
Sbjct: 192 TLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGPADGSLYI 244
>sp|P61228|TM2D1_CAEEL TM2 domain-containing protein C02F5.13 OS=Caenorhabditis elegans
GN=C02F5.13 PE=1 SV=1
Length = 210
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 23 SDNKVNYTTNCETLRLGQYICPDPDPKYEYIDRKTQQPKN--------CTKENLARVRCI 74
S N + C L +C DP P Y + QQP N C K R +
Sbjct: 53 STNPLGPVVECRFLENSFILCEDPVPLYG-PGQTGQQPANESFRNEGKCLKMGGYRAEDV 111
Query: 75 AADNIICLE------TGNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPAL 128
N+ C G TF K C NG+ F T +L SIFLG+ DRF LGY A+
Sbjct: 112 EFTNVKCRVLPCIECHGPRTFTKSTPCIIYNGHYFLTTLLYSIFLGVVAVDRFCLGYSAM 171
Query: 129 GLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPYY 168
+ K TLG I ++VDI L+ ++GPAD S + PYY
Sbjct: 172 AVGKLMTLGGFGIWWIVDIFLLVLGVLGPADDSSW-EPYY 210
>sp|Q5XGR4|TM2D2_XENLA TM2 domain-containing protein 2 OS=Xenopus laevis GN=tm2d2 PE=2
SV=1
Length = 198
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 69 ARVRCIAADNIICLETGNSTFYKDMR-CRWTNGYSFETAMLLSIFLGMFGADRFYLGYPA 127
+V C A D I C G+ +F + R C G+ F T +L S FLG FG DRF LG+
Sbjct: 101 TQVMCRALDGIEC--DGSRSFLRGNRPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTG 158
Query: 128 LGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPY 167
+ K T G + I + VD+IL+ T + P+D S + Y
Sbjct: 159 TAVGKLLTWGGLGIWWFVDLILLITGGLMPSDNSNWCTIY 198
>sp|Q2TA35|TM2D2_BOVIN TM2 domain-containing protein 2 OS=Bos taurus GN=TM2D2 PE=2 SV=1
Length = 214
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 70 RVRCIAADNIICLETGNSTFYKDMR-CRWTNGYSFETAMLLSIFLGMFGADRFYLGYPAL 128
RV+C A D I C TF ++ + C G+ F T +L S FLG FG DRF LG+
Sbjct: 118 RVQCRALDGIECASP--RTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGT 175
Query: 129 GLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPY 167
+ K TLG + I + VD+IL+ T + P+DGS + Y
Sbjct: 176 AVGKLLTLGGLGIWWFVDLILLITGGLMPSDGSNWCTIY 214
>sp|Q9VY86|TM2D2_DROME TM2 domain-containing protein CG11103 OS=Drosophila melanogaster
GN=CG11103 PE=2 SV=3
Length = 224
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 13/129 (10%)
Query: 43 CPDPDPKYEYIDRKTQQPKNCTK--------ENLARVRCIAADNIICLETGNSTFYK-DM 93
C DP E + ++ C K A V C +I C GN TF + +
Sbjct: 93 CKDPVDHRENATAQQEKKYGCLKFGGSTYEEVEHAMVWCTVFADIECY--GNRTFLRAGV 150
Query: 94 RC-RWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIAT 152
C R+T+ Y F T ++ S+ LG G DRF LG + K T+G + + +++D+IL+ T
Sbjct: 151 PCVRYTDHY-FVTTLIYSMLLGFLGMDRFCLGQTGTAVGKLLTMGGVGVWWIIDVILLIT 209
Query: 153 QIVGPADGS 161
+ P DGS
Sbjct: 210 NNLLPEDGS 218
>sp|Q9BX73|TM2D2_HUMAN TM2 domain-containing protein 2 OS=Homo sapiens GN=TM2D2 PE=2 SV=1
Length = 214
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 70 RVRCIAADNIICLETGNSTFYKDMR-CRWTNGYSFETAMLLSIFLGMFGADRFYLGYPAL 128
V+C A D I C TF ++ + C G+ F T +L S FLG FG DRF LG+
Sbjct: 118 SVQCHALDGIECASP--RTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGT 175
Query: 129 GLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPY 167
+ K TLG + I + VD+IL+ T + P+DGS + Y
Sbjct: 176 AVGKLLTLGGLGIWWFVDLILLITGGLMPSDGSNWCTVY 214
>sp|Q6DHN3|TM2D2_DANRE TM2 domain-containing protein 2 OS=Danio rerio GN=tm2d2 PE=2 SV=1
Length = 229
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 67 NLARVRCIAADNIICLETGNSTFYK-DMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGY 125
N +V C A D I C G F + + C G+ F T +L S FLG FG DRF LG+
Sbjct: 130 NHTQVLCTALDGIEC--AGPREFLRGNEPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGH 187
Query: 126 PALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGS 161
+ K TLG + I + VD+IL+ T + P+D S
Sbjct: 188 TGTAVGKLLTLGGLGIWWFVDLILLITGGLTPSDSS 223
>sp|Q566R2|TM2D2_RAT TM2 domain-containing protein 2 OS=Rattus norvegicus GN=Tm2d2 PE=2
SV=1
Length = 213
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 71 VRCIAADNIICLETGNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGL 130
V+C A + I C + + K+ C G+ F T +L S FLG FG DRF LG+ +
Sbjct: 118 VQCRALEGIEC-ASPRTFLRKNKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAV 176
Query: 131 LKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPY 167
K TLG + I + VD+IL+ T + P+DGS + Y
Sbjct: 177 GKLLTLGGLGIWWFVDLILLITGGLMPSDGSNWCTVY 213
>sp|Q8R0I4|TM2D2_MOUSE TM2 domain-containing protein 2 OS=Mus musculus GN=Tm2d2 PE=2 SV=1
Length = 213
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 71 VRCIAADNIICLETGNSTFYKDMR-CRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALG 129
V+C A + I C TF ++ + C G+ F T +L S FLG FG DRF LG+
Sbjct: 118 VQCRALEGIECASP--RTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTA 175
Query: 130 LLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPY 167
+ K TLG + I + VD+IL+ T + P+DGS + Y
Sbjct: 176 VGKLLTLGGLGIWWFVDLILLITGGLMPSDGSNWCTVY 213
>sp|Q5RCC0|TM2D2_PONAB TM2 domain-containing protein 2 OS=Pongo abelii GN=TM2D2 PE=2 SV=1
Length = 214
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 70 RVRCIAADNIICLETGNSTFYKDMR-CRWTNGYSFETAMLLSIFLGMFGADRFYLGYPAL 128
V+C A I C TF ++ + C G+ F T +L S FLG FG DRF LG+
Sbjct: 118 SVQCHALAGIECASP--RTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGT 175
Query: 129 GLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPY 167
+ K TLG + I + VD+IL+ T + P+DGS + Y
Sbjct: 176 AVGKLLTLGGLGIWWFVDLILLITGGLMPSDGSNWCTVY 214
>sp|Q5M8E3|TM2D2_XENTR TM2 domain-containing protein 2 OS=Xenopus tropicalis GN=tm2d2 PE=2
SV=1
Length = 198
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 69 ARVRCIAADNIICLETGNSTFYKDMR-CRWTNGYSFETAMLLSIFLGMFGADRFYLGYPA 127
+V C A D I C G +F + + C G+ F T +L S FLG FG DRF LG+
Sbjct: 101 TQVMCRALDGIEC--DGPRSFLRGNKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTG 158
Query: 128 LGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPY 167
+ K TLG + I + VD+IL+ T + P+D S + Y
Sbjct: 159 TAVGKLLTLGGLGIWWFVDLILLITGGLMPSDNSNWCTIY 198
>sp|Q54KZ0|TM2D3_DICDI TM2 domain-containing protein DDB_G0287015 OS=Dictyostelium
discoideum GN=DDB_G0287015 PE=3 SV=1
Length = 137
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 102 SFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQI 154
S A LL IFLG FG RFY+G G++ T G IGY+VD L+ + +
Sbjct: 11 SLVVAYLLLIFLGFFGVHRFYVGRTISGVVYLLTGGIFGIGYIVDFFLLPSLV 63
>sp|Q9GPR3|TM2D1_DICDI TM2 domain-containing protein DDB_G0277895 OS=Dictyostelium
discoideum GN=DDB_G0277895 PE=3 SV=1
Length = 153
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 108 LLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQI 154
LL +F G+FG RFYL P G+L T G IG+ +DI LI +
Sbjct: 11 LLWLFFGLFGIHRFYLNRPCSGVLYLFTCGCFFIGWFIDICLIPGMV 57
>sp|Q94421|TM2D4_CAEEL TM2 domain-containing protein ZK858.5 OS=Caenorhabditis elegans
GN=ZK858.5 PE=3 SV=2
Length = 409
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 114 GMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQI 154
G+FGA R YL + F TLG +LIG+L D + ++
Sbjct: 21 GLFGAHRLYLKQVPEAFVFFSTLGVLLIGWLYDSFMFKYEV 61
>sp|Q9QYX3|RNAS1_MUSPA Ribonuclease pancreatic OS=Mus pahari GN=Rnase1 PE=2 SV=1
Length = 149
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Query: 1 MGLEFNLLIYTPILLLCLWVQPSDNKVNYTTNCETLRLGQYICPDPDPKY--EYIDRKTQ 58
MGLE +L+++ +LL WVQPS K + E + + P Y + + ++
Sbjct: 1 MGLEKSLILFPLFVLLLGWVQPSLGKESSAQKFERQHMDSSGSSNNSPTYCNQMMKSRSM 60
Query: 59 QPKNC------TKENLARVRCIAADNIICLETGNSTFYKD 92
++C E L V+ I + + + GN YK
Sbjct: 61 TKESCKPVNTFVHEPLEDVQAICSQENVTCKNGNRNCYKS 100
>sp|Q9QYX2|RNAS1_MUSSA Ribonuclease pancreatic OS=Mus saxicola GN=Rnase1 PE=2 SV=1
Length = 149
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 1 MGLEFNLLIYTPILLLCLWVQPSDNKVNYTTNCETLRLGQYICPDPDPKY--EYIDRKTQ 58
MGLE +L+++ +LL WVQPS + + + + P Y + + R+
Sbjct: 1 MGLEKSLMLFPLFVLLLGWVQPSLGRESSAQKFQRQHMDPAGSSSNSPTYCNQMMKRRDM 60
Query: 59 QPKNC------TKENLARVRCIAADNIICLETGNSTFYKD 92
+C E LA V+ I + + + G S YK
Sbjct: 61 TKGSCKPVNTFVHEPLADVQAICSQENVTCKNGKSNCYKS 100
>sp|Q9WUS3|RNAS1_LEOED Ribonuclease pancreatic OS=Leopoldamys edwardsi GN=RNASE1 PE=2 SV=1
Length = 149
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Query: 1 MGLEFNLLIYTPILLLCLWVQPSDNKVNYTTNCETLRLGQYICPDPDPKY-------EYI 53
MGLE + ++++ ++L+ WVQPS K + + + P Y +
Sbjct: 1 MGLEKSFILFSLLVLVLGWVQPSLGKESSAQKFNRQHMDTEGSSNSSPTYCNQMMTPRGM 60
Query: 54 DRKTQQPKNC-TKENLARVRCIAADNIICLETGNSTFYKD 92
+ + +P N E LA V+ I + + + G S YK
Sbjct: 61 TKGSCKPVNTFVHETLADVQAICSQGQVTCKNGKSNCYKS 100
>sp|Q8IUK5|PLDX1_HUMAN Plexin domain-containing protein 1 OS=Homo sapiens GN=PLXDC1 PE=1
SV=2
Length = 500
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 122 YLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNET 181
+ G+P L + T GF+ +G ++ +L ATQ V P ++ P Y T+V DN T
Sbjct: 143 FYGHP-LRQITIATGGFIFMGDVIHRMLTATQYVAPLMANFN--PGYSDNSTVVYFDNGT 199
Query: 182 YRVPQDD 188
V Q D
Sbjct: 200 VFVVQWD 206
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.144 0.466
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,231,214
Number of Sequences: 539616
Number of extensions: 3364148
Number of successful extensions: 7466
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7429
Number of HSP's gapped (non-prelim): 35
length of query: 196
length of database: 191,569,459
effective HSP length: 111
effective length of query: 85
effective length of database: 131,672,083
effective search space: 11192127055
effective search space used: 11192127055
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)