Query psy8107
Match_columns 1613
No_of_seqs 861 out of 2927
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 18:41:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8107.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8107hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a65_A Leutaa, Na(+):neurotran 100.0 3.8E-78 1.3E-82 746.2 4.6 435 839-1304 5-461 (519)
2 3a8n_A TIAM-1, T-lymphoma inva 100.0 4.3E-51 1.5E-55 466.9 10.3 255 1-266 16-271 (279)
3 3a8p_A T-lymphoma invasion and 100.0 3E-43 1E-47 403.4 13.1 236 3-238 12-254 (263)
4 1foe_A T-lymphoma invasion and 100.0 1.2E-37 4.1E-42 375.4 30.7 198 585-782 3-200 (377)
5 1by1_A Protein (PIX); RHO-GTPa 100.0 3.4E-31 1.2E-35 294.1 12.7 181 591-786 11-192 (209)
6 2z0q_A XPLN, RHO guanine nucle 100.0 7.9E-30 2.7E-34 303.7 15.4 189 586-787 12-201 (346)
7 3jv3_A Intersectin-1; SH3 doma 100.0 3.9E-29 1.3E-33 289.2 15.3 190 588-787 77-268 (283)
8 1xcg_A PDZ-rhogef, RHO guanine 100.0 2.8E-28 9.6E-33 292.6 16.1 191 586-789 14-212 (368)
9 2dfk_A Collybistin II; DH doma 100.0 4.4E-28 1.5E-32 294.5 17.5 191 586-788 34-226 (402)
10 3t06_A PDZ-rhogef, RHO guanine 99.9 1E-27 3.5E-32 292.6 17.1 192 585-789 55-254 (418)
11 2vrw_B P95VAV, VAV1, proto-onc 99.9 1.3E-27 4.3E-32 290.9 15.2 186 587-789 19-206 (406)
12 2pz1_A RHO guanine nucleotide 99.9 1.4E-27 4.8E-32 295.4 15.3 191 586-788 111-303 (466)
13 3p6a_A RHO guanine nucleotide 99.9 1.9E-27 6.4E-32 286.3 13.9 193 585-790 19-219 (377)
14 3odw_A RHO guanine nucleotide 99.9 2.5E-27 8.7E-32 297.4 15.3 192 585-789 172-371 (536)
15 3mpx_A FYVE, rhogef and PH dom 99.9 1.9E-27 6.4E-32 291.6 11.7 190 589-791 18-218 (434)
16 1txd_A RHO guanine nucleotide 99.9 3.4E-27 1.1E-31 285.1 13.0 191 587-789 18-216 (385)
17 1kz7_A Guanine nucleotide exch 99.9 5E-27 1.7E-31 280.6 11.6 177 589-786 7-190 (353)
18 2rgn_B RHOA/RAC/CDC42 exchange 99.9 6.1E-27 2.1E-31 280.0 11.2 177 588-785 7-186 (354)
19 1nty_A Triple functional domai 99.9 4.2E-26 1.4E-30 267.9 11.4 173 588-784 4-181 (311)
20 3ky9_A Proto-oncogene VAV; cal 99.9 4.4E-26 1.5E-30 289.6 10.7 186 587-789 191-378 (587)
21 1dbh_A Protein (human SOS 1); 99.9 3.3E-26 1.1E-30 273.4 8.1 181 594-785 4-191 (354)
22 3jzy_A Intersectin 2; C2 domai 99.9 4.2E-27 1.4E-31 293.8 0.0 193 587-789 21-215 (510)
23 3ksy_A SOS-1, SON of sevenless 99.9 9.4E-24 3.2E-28 283.0 7.1 185 591-786 198-389 (1049)
24 3pp2_A RHO GTPase-activating p 99.8 5.8E-20 2E-24 187.5 12.2 106 3-108 9-123 (124)
25 1dro_A Beta-spectrin; cytoskel 99.7 1.3E-18 4.4E-23 176.6 9.2 106 3-108 9-119 (122)
26 2p0d_A RHO GTPase-activating p 99.7 1E-17 3.5E-22 172.1 13.1 107 3-109 13-125 (129)
27 2dtc_A RAL guanine nucleotide 99.7 2.5E-17 8.6E-22 167.6 14.3 103 3-108 2-112 (126)
28 3cxb_B Pleckstrin homology dom 99.7 1.8E-17 6.1E-22 166.1 12.5 99 4-109 2-102 (112)
29 1wjm_A Beta-spectrin III; PH d 99.7 3E-17 1E-21 166.4 11.9 107 3-109 9-118 (123)
30 1btn_A Beta-spectrin; signal t 99.6 3.3E-16 1.1E-20 153.8 10.0 103 4-106 1-106 (106)
31 2d8i_A T-cell lymphoma invasio 99.5 5.1E-14 1.8E-18 141.6 11.5 97 345-447 5-102 (114)
32 1wgq_A FYVE, rhogef and PH dom 99.4 6.5E-13 2.2E-17 131.4 13.0 94 4-108 10-103 (109)
33 2j59_M RHO-GTPase activating p 99.4 4.6E-13 1.6E-17 143.0 10.7 101 3-108 4-111 (168)
34 2coc_A FYVE, rhogef and PH dom 99.4 9.5E-13 3.3E-17 131.9 10.4 92 4-108 10-106 (112)
35 3kzd_A TIAM-1, T-lymphoma inva 99.4 2.2E-12 7.5E-17 125.0 11.9 87 353-445 4-91 (94)
36 1pls_A Pleckstrin homology dom 99.4 3.6E-12 1.2E-16 126.7 13.9 96 3-109 6-102 (113)
37 1wi1_A Calcium-dependent activ 99.4 1.9E-12 6.4E-17 131.2 11.9 103 4-118 10-119 (126)
38 1wi2_A Riken cDNA 2700099C19; 99.3 4.1E-12 1.4E-16 125.3 11.9 93 349-448 9-101 (104)
39 1r6j_A Syntenin 1; PDZ, membra 99.3 3.1E-12 1.1E-16 121.0 10.5 76 355-444 4-80 (82)
40 1u5d_A SKAP55, SRC kinase-asso 99.3 4.7E-12 1.6E-16 124.0 11.2 98 4-108 5-105 (108)
41 1v88_A Oxysterol binding prote 99.3 9.6E-12 3.3E-16 127.9 12.5 94 3-109 9-125 (130)
42 2i5f_A Pleckstrin; PH domain, 99.3 1.2E-11 4.3E-16 121.7 12.6 93 4-107 9-108 (109)
43 2w2x_D 1-phosphatidylinositol- 99.3 3.9E-12 1.3E-16 129.5 9.1 102 3-109 13-120 (124)
44 2cof_A Protein KIAA1914; PH do 99.3 3.4E-12 1.2E-16 126.2 8.3 93 3-108 9-101 (107)
45 1x1f_A Signal-transducing adap 99.3 1.8E-11 6.3E-16 128.7 14.3 93 4-108 20-113 (149)
46 2dkp_A Pleckstrin homology dom 99.3 7.9E-12 2.7E-16 126.8 10.9 97 3-109 22-120 (128)
47 2yry_A Pleckstrin homology dom 99.3 1.5E-11 5.2E-16 123.6 12.5 95 4-108 24-120 (122)
48 1qav_A Alpha-1 syntrophin (res 99.3 1.7E-11 5.8E-16 117.5 12.0 85 355-446 4-90 (90)
49 1uez_A KIAA1526 protein; PDZ d 99.3 7.3E-12 2.5E-16 122.7 9.5 93 353-451 6-98 (101)
50 1u5f_A SRC-associated adaptor 99.3 1.5E-11 5.1E-16 128.6 12.3 98 4-108 19-119 (148)
51 2d9y_A Pleckstrin homology dom 99.3 2.1E-11 7E-16 121.6 12.7 96 3-108 12-109 (117)
52 1m5z_A GRIP, AMPA receptor int 99.3 2.9E-11 9.9E-16 116.0 12.9 87 352-445 3-90 (91)
53 1x05_A Pleckstrin; PH domain, 99.3 1.9E-11 6.6E-16 124.3 12.2 96 4-110 20-122 (129)
54 1upq_A PEPP1; PH domain, phosp 99.3 2.9E-11 9.8E-16 121.8 12.8 97 3-109 12-110 (123)
55 3l4f_D SH3 and multiple ankyri 99.2 2.2E-11 7.5E-16 125.5 11.8 98 352-450 24-128 (132)
56 1fgy_A GRP1; PH domain, signal 99.2 3.7E-11 1.3E-15 121.4 13.0 95 3-109 6-121 (127)
57 1v89_A Hypothetical protein KI 99.2 3.4E-11 1.2E-15 120.0 12.5 94 4-108 10-112 (118)
58 2dhk_A TBC1 domain family memb 99.2 4.6E-11 1.6E-15 120.4 13.6 95 3-109 9-105 (119)
59 1wg7_A Dedicator of cytokinesi 99.2 1.9E-11 6.4E-16 127.9 11.1 101 3-109 19-125 (150)
60 4a6h_A Phosphatidylinositol 4, 99.2 2.1E-11 7E-16 123.7 10.8 97 4-108 8-118 (120)
61 2vwr_A Ligand of NUMB protein 99.2 4.3E-11 1.5E-15 115.8 12.6 86 355-447 3-90 (95)
62 2jik_A Synaptojanin-2 binding 99.2 4.8E-11 1.6E-15 116.8 12.9 92 353-448 5-99 (101)
63 4e34_A Golgi-associated PDZ an 99.2 3.9E-11 1.3E-15 114.1 11.9 83 355-444 2-86 (87)
64 2q9v_A Membrane-associated gua 99.2 3.2E-11 1.1E-15 115.4 11.4 83 356-446 3-89 (90)
65 1nf3_C PAR-6B; semi-CRIB motif 99.2 2.2E-11 7.7E-16 124.7 10.9 99 349-447 23-126 (128)
66 2dc2_A GOPC, golgi associated 99.2 3.6E-11 1.2E-15 118.5 11.9 90 352-448 6-97 (103)
67 1dyn_A Dynamin; signal transdu 99.2 3.1E-11 1.1E-15 121.1 11.3 95 3-106 13-115 (125)
68 3rcp_A Pleckstrin homology dom 99.2 2.2E-11 7.7E-16 119.0 10.2 94 4-109 1-94 (103)
69 2he4_A Na(+)/H(+) exchange reg 99.2 5.3E-11 1.8E-15 114.0 12.4 83 355-446 4-87 (90)
70 2d9v_A Pleckstrin homology dom 99.2 3E-11 1E-15 123.9 11.3 94 4-108 10-114 (130)
71 2awx_A Synapse associated prot 99.2 5E-11 1.7E-15 117.7 12.4 92 353-447 1-94 (105)
72 2iwo_A Multiple PDZ domain pro 99.2 2.8E-11 9.7E-16 122.6 10.8 96 349-448 18-115 (120)
73 2pa1_A PDZ and LIM domain prot 99.2 7E-11 2.4E-15 112.4 12.8 83 358-447 3-86 (87)
74 2d92_A INAD-like protein; PDZ 99.2 4.2E-11 1.4E-15 118.9 11.7 93 348-444 8-103 (108)
75 3b76_A E3 ubiquitin-protein li 99.2 4.1E-11 1.4E-15 121.2 11.7 95 348-446 17-113 (118)
76 2uzc_A Human pdlim5, PDZ and L 99.2 7.1E-11 2.4E-15 112.5 12.6 82 356-446 4-86 (88)
77 2qg1_A Multiple PDZ domain pro 99.2 6E-11 2.1E-15 114.0 11.9 84 355-446 4-89 (92)
78 2r4h_A Membrane-associated gua 99.2 5.7E-11 1.9E-15 118.8 12.1 87 352-446 21-109 (112)
79 2eeh_A PDZ domain-containing p 99.2 4.9E-11 1.7E-15 116.6 11.4 89 355-450 10-98 (100)
80 1d5g_A Human phosphatase HPTP1 99.2 7.3E-11 2.5E-15 114.3 12.5 89 353-446 3-93 (96)
81 2dn6_A KIAA0640 protein; PH do 99.2 6.4E-11 2.2E-15 117.7 12.3 95 3-109 9-104 (115)
82 1uhp_A Hypothetical protein KI 99.2 6.1E-11 2.1E-15 117.4 12.0 94 355-450 8-105 (107)
83 2fne_A Multiple PDZ domain pro 99.2 4.9E-11 1.7E-15 120.4 11.3 89 354-447 24-114 (117)
84 1ihj_A INAD; intermolecular di 99.2 7.4E-11 2.5E-15 114.7 12.2 91 355-446 5-97 (98)
85 1uep_A Membrane associated gua 99.2 2.8E-11 9.6E-16 119.1 9.3 85 356-448 10-98 (103)
86 2jil_A GRIP1 protein, glutamat 99.2 8.5E-11 2.9E-15 114.1 12.6 88 356-447 4-93 (97)
87 2i04_A Membrane-associated gua 99.2 8.2E-11 2.8E-15 111.4 12.1 80 357-444 2-85 (85)
88 3qe1_A Sorting nexin-27, G pro 99.2 8.2E-11 2.8E-15 116.4 12.6 90 355-448 6-104 (107)
89 3nfk_A Tyrosine-protein phosph 99.2 5.8E-11 2E-15 117.4 11.5 88 350-444 12-106 (107)
90 1kwa_A Hcask/LIN-2 protein; PD 99.2 6.5E-11 2.2E-15 113.3 11.4 82 356-446 2-85 (88)
91 3o46_A Maguk P55 subfamily mem 99.2 7.6E-11 2.6E-15 113.7 11.9 84 354-446 3-88 (93)
92 2i1n_A Discs, large homolog 3; 99.2 1.1E-10 3.8E-15 114.4 13.2 90 356-448 5-96 (102)
93 1q3o_A Shank1; PDZ, GKAP, pept 99.2 8.3E-11 2.8E-15 116.9 12.4 92 355-449 7-107 (109)
94 1fao_A Dual adaptor of phospho 99.2 5.4E-11 1.8E-15 120.5 11.2 95 3-109 19-113 (126)
95 3cbz_A Dishevelled-2; PDZ doma 99.2 4.5E-11 1.5E-15 118.8 10.2 88 355-447 5-97 (108)
96 2q3g_A PDZ and LIM domain prot 99.2 1E-10 3.4E-15 111.8 12.2 82 357-447 5-87 (89)
97 1n7e_A AMPA receptor interacti 99.2 9.8E-11 3.3E-15 113.8 12.3 85 355-447 5-91 (97)
98 2v90_A PDZ domain-containing p 99.2 9.8E-11 3.3E-15 113.5 12.2 87 355-447 3-90 (96)
99 2fe5_A Presynaptic protein SAP 99.2 1.1E-10 3.7E-15 112.6 12.5 89 355-446 3-93 (94)
100 2ego_A General receptor for ph 99.2 1.1E-10 3.8E-15 113.2 12.4 89 355-444 4-94 (96)
101 1i16_A Interleukin 16, LCF; cy 99.2 4.4E-11 1.5E-15 122.9 10.0 91 354-449 28-121 (130)
102 1u5e_A SRC-associated adaptor 99.2 5.6E-11 1.9E-15 132.1 11.6 98 4-108 108-208 (211)
103 2vsp_A PDZ domain-containing p 99.2 3E-11 1E-15 116.1 8.0 84 355-447 3-87 (91)
104 3k1r_A Harmonin; protein-prote 99.2 5.7E-11 1.9E-15 130.0 11.3 111 329-451 63-173 (192)
105 3aj4_A Pleckstrin homology dom 99.2 3.8E-11 1.3E-15 119.1 9.0 94 3-107 6-110 (112)
106 2byg_A Channel associated prot 99.2 8.3E-11 2.9E-15 118.7 11.7 95 349-446 18-114 (117)
107 2d9x_A Oxysterol binding prote 99.2 5.7E-11 2E-15 119.7 10.4 95 3-109 9-105 (120)
108 2dkr_A LIN-7 homolog B; LIN-7B 99.2 6.6E-11 2.2E-15 113.9 10.4 84 355-446 5-90 (93)
109 1g9o_A NHE-RF; PDZ domain, com 99.2 1.3E-10 4.4E-15 111.4 12.4 79 356-443 4-83 (91)
110 2ehr_A INAD-like protein; PDZ 99.2 6.9E-11 2.3E-15 119.0 10.8 96 354-450 14-114 (117)
111 1x1g_A Pleckstrin 2; PH domain 99.2 6.5E-11 2.2E-15 120.3 10.8 95 4-108 20-124 (129)
112 1wi4_A Synip, syntaxin binding 99.2 8.8E-11 3E-15 117.0 11.4 90 351-447 11-106 (109)
113 2db5_A INAD-like protein; PDZ 99.2 1.2E-10 4E-15 119.2 12.6 90 353-446 23-115 (128)
114 1rgw_A ZAsp protein; PDZ, cyph 99.2 7.2E-11 2.5E-15 111.7 10.0 82 356-446 2-84 (85)
115 3hpk_A Protein interacting wit 99.2 1.1E-10 3.8E-15 118.8 12.1 86 355-447 19-106 (125)
116 1ueq_A Membrane associated gua 99.2 1.3E-10 4.5E-15 118.1 12.3 87 355-449 19-109 (123)
117 2dls_A PDZ-rhogef, RHO guanine 99.2 1.4E-10 4.8E-15 112.0 11.8 84 354-449 7-90 (93)
118 2cs5_A Tyrosine-protein phosph 99.2 8.7E-11 3E-15 118.6 10.8 88 352-446 12-106 (119)
119 1v62_A KIAA1719 protein; struc 99.2 1.7E-10 5.7E-15 116.4 12.8 88 354-447 14-103 (117)
120 3r68_A Na(+)/H(+) exchange reg 99.2 1.2E-10 4.1E-15 112.4 11.3 85 353-446 3-88 (95)
121 1wf8_A Neurabin-I; PDZ domain, 99.2 1.8E-10 6.2E-15 114.0 12.7 92 356-449 10-103 (107)
122 2o2t_A Multiple PDZ domain pro 99.2 7.4E-11 2.5E-15 118.6 10.0 90 354-447 19-111 (117)
123 2kpk_A Membrane-associated gua 99.2 2.9E-10 9.8E-15 116.6 14.5 88 355-450 18-109 (129)
124 1ujd_A KIAA0559 protein; PDZ d 99.2 1.5E-10 5.2E-15 116.6 12.1 94 353-447 10-110 (117)
125 2f5y_A Regulator of G-protein 99.2 1.5E-10 5.1E-15 111.2 11.5 80 356-447 4-84 (91)
126 2a65_A Leutaa, Na(+):neurotran 99.1 6.8E-12 2.3E-16 155.8 2.4 107 766-875 374-484 (519)
127 1ufx_A KIAA1526 protein; PDZ d 99.1 9.4E-11 3.2E-15 115.6 10.1 88 356-450 7-101 (103)
128 3i4w_A Disks large homolog 4; 99.1 1.8E-10 6.1E-15 113.1 12.0 86 351-445 7-94 (104)
129 1eaz_A Tandem PH domain contai 99.1 8E-11 2.7E-15 118.7 9.3 95 3-109 15-112 (125)
130 2pkt_A PDZ and LIM domain prot 99.1 2.7E-10 9.3E-15 109.3 12.3 83 356-447 4-87 (91)
131 2eno_A Synaptojanin-2-binding 99.1 2E-10 6.8E-15 116.2 11.6 91 354-448 16-109 (120)
132 2opg_A Multiple PDZ domain pro 99.1 3.3E-10 1.1E-14 110.1 12.8 86 355-447 4-91 (98)
133 2yt7_A Amyloid beta A4 precurs 99.1 2.6E-10 9E-15 111.8 12.1 88 353-445 7-98 (101)
134 1wha_A KIAA0147 protein, scrib 99.1 2E-10 6.8E-15 113.3 11.2 89 355-447 7-99 (105)
135 2ejy_A 55 kDa erythrocyte memb 99.1 2.1E-10 7E-15 112.1 11.1 82 355-445 12-95 (97)
136 1wfg_A Regulating synaptic mem 99.1 2.5E-10 8.6E-15 117.4 12.4 90 354-447 35-128 (131)
137 2lul_A Tyrosine-protein kinase 99.1 2.9E-10 9.9E-15 121.4 12.7 100 4-109 17-122 (164)
138 2d90_A PDZ domain containing p 99.1 2.1E-10 7.2E-15 112.5 10.7 83 355-446 6-89 (102)
139 2djt_A Unnamed protein product 99.1 2.5E-10 8.4E-15 112.3 11.2 89 355-449 11-101 (104)
140 1uew_A Membrane associated gua 99.1 3.1E-10 1.1E-14 113.7 12.0 93 355-448 10-105 (114)
141 1v5u_A SBF1, SET binding facto 99.1 2.2E-10 7.4E-15 114.2 10.9 93 4-108 10-111 (117)
142 3axa_A Afadin, nectin-3, prote 99.1 4.3E-10 1.5E-14 111.0 12.8 87 355-447 11-99 (106)
143 2daz_A INAD-like protein; PDZ 99.1 2.4E-10 8.2E-15 116.3 11.2 94 347-447 17-112 (124)
144 1uju_A Scribble; PDZ domain, c 99.1 6.7E-11 2.3E-15 117.9 6.9 94 352-446 6-104 (111)
145 1um1_A KIAA1849 protein, RSGI 99.1 3.9E-10 1.3E-14 112.1 12.3 88 354-446 7-96 (110)
146 3ngh_A PDZ domain-containing p 99.1 2.5E-10 8.5E-15 112.7 10.6 83 356-446 2-85 (106)
147 1v5p_A Pleckstrin homology dom 99.1 3.1E-10 1.1E-14 116.0 11.7 97 5-108 18-120 (126)
148 2y7b_A Actin-binding protein a 99.1 1.7E-10 5.7E-15 118.1 9.6 101 3-109 6-129 (134)
149 1z87_A Alpha-1-syntrophin; pro 99.1 2.5E-10 8.7E-15 130.4 12.0 89 355-450 77-167 (263)
150 3e17_A Tight junction protein 99.1 3.6E-10 1.2E-14 108.1 11.1 75 358-444 3-79 (88)
151 1vb7_A PDZ and LIM domain 2; P 99.1 1.8E-10 6.2E-15 111.3 9.1 84 357-447 6-90 (94)
152 1x6d_A Interleukin-16; PDZ dom 99.1 4.1E-10 1.4E-14 113.6 12.1 89 353-447 13-104 (119)
153 3gge_A PDZ domain-containing p 99.1 4.1E-10 1.4E-14 108.9 11.4 81 354-444 4-88 (95)
154 1q7x_A PDZ2B domain of PTP-BAS 99.1 2.3E-10 7.7E-15 113.4 9.4 90 353-447 7-103 (108)
155 2da0_A 130-kDa phosphatidylino 99.1 6.8E-10 2.3E-14 110.9 12.9 97 3-114 11-107 (114)
156 2eeg_A PDZ and LIM domain prot 99.1 3E-10 1E-14 109.8 10.0 84 355-447 8-92 (94)
157 2gzv_A PRKCA-binding protein; 99.1 6.4E-10 2.2E-14 111.7 12.6 88 352-446 21-110 (114)
158 1va8_A Maguk P55 subfamily mem 99.1 6.6E-10 2.3E-14 111.2 12.6 84 354-447 24-109 (113)
159 2kv8_A RGS12, regulator of G-p 99.1 1.3E-10 4.4E-15 109.6 6.9 78 356-445 3-81 (83)
160 1wf7_A Enigma homologue protei 99.1 4.8E-10 1.6E-14 110.2 11.2 85 355-448 5-90 (103)
161 3bpu_A Membrane-associated gua 99.1 5.5E-10 1.9E-14 106.4 11.3 82 355-447 3-87 (88)
162 2g5m_B Neurabin-2; spinophilin 99.1 5.5E-10 1.9E-14 111.6 11.8 91 356-448 5-97 (113)
163 1uf1_A KIAA1526 protein; PDZ d 99.1 1.1E-09 3.8E-14 111.9 14.2 91 355-452 20-110 (128)
164 1v5q_A GRIP1 homolog, glutamat 99.1 4.2E-10 1.4E-14 114.2 10.8 93 352-447 12-108 (122)
165 2rsg_A Collagen type IV alpha- 99.1 3.2E-10 1.1E-14 109.1 9.5 91 3-106 2-92 (94)
166 4amh_A Disks large homolog 1; 99.1 5.3E-10 1.8E-14 110.7 11.2 81 366-447 11-93 (106)
167 2eei_A PDZ domain-containing p 99.1 2.3E-10 7.9E-15 112.9 8.5 84 355-447 8-92 (106)
168 2jre_A C60-1 PDZ domain peptid 99.1 5.8E-10 2E-14 110.4 11.2 90 356-447 13-105 (108)
169 3khf_A Microtubule-associated 99.1 6.7E-10 2.3E-14 108.2 11.5 87 358-447 5-94 (99)
170 1wg6_A Hypothetical protein (r 99.1 2.8E-10 9.6E-15 116.4 9.2 89 357-448 27-124 (127)
171 2w4f_A Protein LAP4; structura 99.1 1E-09 3.6E-14 106.3 12.7 88 356-447 4-94 (97)
172 2csj_A TJP2 protein; PDZ domai 99.1 3.8E-10 1.3E-14 113.6 9.8 90 355-448 14-106 (117)
173 2cod_A Centaurin-delta 1; ARF 99.0 9.4E-10 3.2E-14 109.7 12.5 91 4-109 10-100 (115)
174 2rlo_A Centaurin-gamma 1; spli 99.0 4.5E-10 1.5E-14 114.6 10.2 103 4-109 6-125 (128)
175 1unq_A RAC-alpha serine/threon 99.0 1.4E-10 4.9E-15 117.3 6.5 95 4-109 10-111 (125)
176 2h2b_A Tight junction protein 99.0 1E-09 3.5E-14 108.5 12.4 90 355-448 7-99 (107)
177 1wfv_A Membrane associated gua 99.0 2.3E-10 7.9E-15 112.1 7.7 83 357-447 13-97 (103)
178 1x5q_A LAP4 protein; PDZ domai 99.0 1.2E-09 4E-14 108.6 12.9 91 353-447 13-106 (110)
179 2dlu_A INAD-like protein; PDZ 99.0 5.8E-10 2E-14 111.1 10.6 84 354-447 14-99 (111)
180 2edp_A Fragment, shroom family 99.0 4.4E-10 1.5E-14 110.0 9.5 86 354-447 8-95 (100)
181 1mfg_A ERB-B2 interacting prot 99.0 9.7E-10 3.3E-14 106.2 11.7 86 357-446 5-93 (95)
182 2fcf_A Multiple PDZ domain pro 99.0 8.1E-10 2.8E-14 108.3 11.2 89 355-446 4-99 (103)
183 1tp5_A Presynaptic density pro 99.0 7.6E-10 2.6E-14 111.6 11.3 87 351-446 10-98 (119)
184 3egg_C Spinophilin; PP1, serin 99.0 9.7E-10 3.3E-14 118.1 12.7 87 355-444 80-169 (170)
185 2jxo_A Ezrin-radixin-moesin-bi 99.0 4.7E-10 1.6E-14 109.1 9.3 81 356-445 10-92 (98)
186 2yuy_A RHO GTPase activating p 99.0 1.2E-10 4.2E-15 118.8 5.3 93 355-449 8-123 (126)
187 2la8_A Inactivation-NO-after-p 99.0 1.1E-09 3.7E-14 108.6 11.8 81 356-446 3-85 (106)
188 2koj_A Partitioning defective 99.0 1.5E-09 5E-14 108.0 12.9 86 357-447 13-102 (111)
189 3soe_A Membrane-associated gua 99.0 1.1E-09 3.7E-14 109.7 11.7 82 354-448 11-95 (113)
190 2dm8_A INAD-like protein; PDZ 99.0 4.7E-10 1.6E-14 112.5 9.0 89 352-447 14-104 (116)
191 2e7k_A Maguk P55 subfamily mem 99.0 4.2E-10 1.4E-14 108.3 8.3 82 353-445 4-87 (91)
192 3sfj_A TAX1-binding protein 3; 99.0 1.5E-09 5E-14 106.7 11.7 90 355-444 4-103 (104)
193 2dmz_A INAD-like protein; PDZ 99.0 1.1E-09 3.9E-14 111.9 11.3 91 355-447 15-107 (129)
194 2vsv_A Rhophilin-2; scaffold p 99.0 9.5E-10 3.3E-14 109.7 10.1 80 354-445 22-103 (109)
195 1v6b_A Harmonin isoform A1; st 99.0 1.5E-09 5.1E-14 109.6 11.7 83 355-445 18-106 (118)
196 2qkv_A Inactivation-NO-after-p 99.0 1.4E-09 4.9E-14 105.5 11.1 80 356-445 9-90 (96)
197 1n7t_A 99-MER peptide of densi 99.0 1.1E-09 3.8E-14 107.5 10.4 88 355-446 11-101 (103)
198 2r09_A Cytohesin-3; autoinhibi 99.0 1.2E-09 4E-14 130.3 12.7 94 3-108 214-328 (347)
199 1y7n_A Amyloid beta A4 precurs 99.0 1.5E-09 5.2E-14 104.4 10.9 75 357-444 13-88 (90)
200 2iwq_A Multiple PDZ domain pro 99.0 1.7E-09 5.7E-14 110.1 11.8 89 356-447 25-120 (123)
201 1qau_A Neuronal nitric oxide s 99.0 2.4E-09 8.1E-14 106.7 12.6 85 355-447 1-88 (112)
202 1btk_A Bruton'S tyrosine kinas 99.0 5.1E-10 1.7E-14 120.2 8.3 103 4-109 5-133 (169)
203 1x5n_A Harmonin; PDZ domain, u 99.0 1.1E-09 3.8E-14 109.5 10.0 83 356-445 16-98 (114)
204 2iwn_A Multiple PDZ domain pro 99.0 1.8E-09 6.2E-14 104.3 11.1 87 356-446 5-93 (97)
205 3tfm_A Myosin X; split PH doma 99.0 8.3E-10 2.8E-14 124.1 10.0 96 4-108 60-155 (228)
206 2edz_A PDZ domain-containing p 99.0 9.9E-10 3.4E-14 110.0 9.4 84 355-446 13-97 (114)
207 2edv_A FERM and PDZ domain-con 99.0 4.3E-10 1.5E-14 109.3 6.5 81 355-446 8-89 (96)
208 2lob_A Golgi-associated PDZ an 98.5 6E-11 2E-15 118.9 0.0 85 352-443 24-110 (112)
209 2z17_A Pleckstrin homology SEC 99.0 1.4E-09 4.9E-14 107.0 9.5 87 355-442 15-103 (104)
210 2q13_A DCC-interacting protein 98.9 1.5E-09 5.1E-14 131.2 11.2 96 3-108 279-375 (385)
211 1ujv_A Membrane associated gua 98.9 4.4E-09 1.5E-13 102.2 12.1 81 354-447 9-92 (96)
212 2vz5_A TAX1-binding protein 3; 98.9 4E-09 1.4E-13 109.6 11.6 93 356-448 24-126 (139)
213 1b8q_A Protein (neuronal nitri 98.9 2.4E-09 8.3E-14 109.2 9.6 87 353-447 6-95 (127)
214 2eaq_A LIM domain only protein 98.9 5.4E-09 1.9E-13 99.9 11.4 81 357-446 5-89 (90)
215 2kom_A Partitioning defective 98.9 6.7E-09 2.3E-13 105.3 12.6 85 357-446 32-120 (121)
216 1um7_A Synapse-associated prot 98.9 1.4E-09 4.9E-14 108.3 7.5 84 353-445 13-98 (113)
217 1uit_A Human discs large 5 pro 98.9 7.6E-09 2.6E-13 104.0 12.8 85 354-448 18-103 (117)
218 2kjd_A Sodium/hydrogen exchang 98.9 3.5E-09 1.2E-13 108.0 10.3 82 356-446 10-93 (128)
219 3gsl_A Disks large homolog 4; 98.9 5.4E-09 1.9E-13 113.5 12.5 88 356-447 6-96 (196)
220 1whd_A RGS3, regulator of G-pr 98.9 2.5E-09 8.7E-14 104.6 8.8 79 356-446 16-95 (100)
221 1v5l_A PDZ and LIM domain 3; a 98.9 1E-09 3.5E-14 107.9 6.0 74 368-447 15-89 (103)
222 4h8s_A DCC-interacting protein 98.9 2.2E-09 7.5E-14 130.6 9.2 97 3-109 302-399 (407)
223 2qt5_A Glutamate receptor-inte 98.9 6.4E-09 2.2E-13 114.1 11.9 87 354-447 6-94 (200)
224 1qqg_A IRS-1, insulin receptor 98.9 3E-09 1E-13 122.0 9.3 93 4-108 12-112 (264)
225 3qik_A Phosphatidylinositol 3, 98.9 8.4E-09 2.9E-13 100.8 10.8 77 357-444 19-99 (101)
226 3cyy_A Tight junction protein 98.9 1.3E-08 4.5E-13 97.4 12.0 80 356-447 3-84 (92)
227 1p1d_A PDZ45, glutamate recept 98.9 1E-08 3.5E-13 112.2 12.7 95 351-448 2-100 (196)
228 2fjl_A 1-phosphatidylinositol- 98.8 1.2E-08 4.1E-13 106.1 11.8 100 4-108 3-148 (150)
229 1wif_A RSGI RUH-020, riken cDN 98.8 5.4E-09 1.8E-13 106.8 9.1 80 355-445 27-110 (126)
230 1vae_A Rhophilin 2, rhophilin, 98.8 2.6E-09 8.8E-14 106.8 6.4 81 356-448 16-98 (111)
231 3tsv_A Tight junction protein 98.8 9.1E-09 3.1E-13 104.8 10.3 81 355-446 29-112 (124)
232 2yub_A LIMK-2, LIM domain kina 98.8 9.8E-09 3.4E-13 103.8 10.4 92 352-447 12-106 (118)
233 2rcz_A Tight junction protein 98.8 1.9E-08 6.5E-13 93.7 11.5 72 362-445 7-80 (81)
234 2krg_A Na(+)/H(+) exchange reg 98.8 1.2E-08 4.2E-13 113.5 11.1 82 356-446 10-93 (216)
235 3r0h_A INAD, inactivation-NO-a 98.8 1.4E-08 4.9E-13 111.5 11.6 93 349-447 12-109 (206)
236 2rov_A RHO-associated protein 98.8 1.2E-08 4E-13 103.1 8.2 100 2-108 1-115 (117)
237 2ys3_A UNC-112-related protein 98.8 1.4E-08 4.7E-13 103.7 8.6 87 18-108 23-112 (137)
238 3tca_A Amyloid beta A4 precurs 98.7 1.5E-08 5.1E-13 117.2 9.9 93 3-106 169-274 (291)
239 3gsl_A Disks large homolog 4; 98.7 3.7E-08 1.3E-12 106.8 12.4 89 356-447 101-191 (196)
240 2qbw_A PDZ-fibronectin fusion 98.7 2.7E-08 9.4E-13 108.4 10.6 77 367-444 1-80 (195)
241 1wh1_A KIAA1095 protein; PDZ d 98.7 2.2E-08 7.4E-13 101.9 8.2 88 355-448 19-109 (124)
242 3shw_A Tight junction protein 98.7 3.6E-08 1.2E-12 121.0 11.4 81 355-446 1-84 (468)
243 1w9e_A Syntenin 1; cell adhesi 98.7 7E-08 2.4E-12 102.8 11.9 80 355-444 4-85 (166)
244 3lju_X ARF-GAP with dual PH do 98.7 4.8E-08 1.7E-12 117.9 11.4 95 4-109 271-373 (386)
245 3r0h_A INAD, inactivation-NO-a 98.7 7.7E-08 2.6E-12 105.7 11.5 80 357-446 115-196 (206)
246 3tsz_A Tight junction protein 98.6 7.5E-08 2.6E-12 116.4 11.5 82 354-446 8-92 (391)
247 2qt5_A Glutamate receptor-inte 98.6 1.7E-07 6E-12 102.6 11.9 87 357-447 108-196 (200)
248 3lju_X ARF-GAP with dual PH do 98.6 5.1E-08 1.7E-12 117.7 7.8 94 4-108 148-246 (386)
249 2xkx_A Disks large homolog 4; 98.6 1.2E-07 4.1E-12 123.3 11.1 91 355-448 59-151 (721)
250 3suz_A Amyloid beta A4 precurs 98.5 8E-08 2.7E-12 116.1 6.2 89 353-446 202-294 (388)
251 2d9w_A Docking protein 2; PH d 98.4 1E-06 3.6E-11 88.4 11.3 95 5-106 15-119 (127)
252 1p1d_A PDZ45, glutamate recept 98.4 7.6E-07 2.6E-11 97.3 10.5 85 357-446 109-195 (196)
253 2xkx_A Disks large homolog 4; 98.4 8.1E-07 2.8E-11 115.5 11.5 86 352-446 304-391 (721)
254 2pzd_A Serine protease HTRA2; 98.3 1.6E-06 5.6E-11 86.3 8.4 57 388-446 35-91 (113)
255 4f7h_A Fermitin family homolog 98.2 2.5E-06 8.7E-11 89.1 9.3 87 18-108 61-150 (173)
256 3hk0_A Growth factor receptor- 98.2 3.5E-06 1.2E-10 95.8 9.3 95 3-108 133-240 (256)
257 4bbk_A Kindlin-1, fermitin fam 98.1 4.7E-06 1.6E-10 86.2 8.7 87 18-108 40-129 (165)
258 2p3w_A Probable serine proteas 98.1 4.6E-06 1.6E-10 83.0 8.3 57 388-446 35-91 (112)
259 2i6v_A General secretion pathw 98.1 3.2E-06 1.1E-10 80.4 6.7 57 388-446 19-78 (87)
260 2zpm_A Regulator of sigma E pr 98.1 3.9E-06 1.3E-10 80.1 6.4 55 390-446 6-62 (91)
261 2kjp_A Uncharacterized protein 98.0 2.4E-06 8.1E-11 82.3 3.9 56 389-447 2-60 (91)
262 3id1_A Regulator of sigma E pr 98.0 8.1E-06 2.8E-10 79.1 7.7 56 390-447 4-62 (95)
263 3i18_A LMO2051 protein; alpha- 98.0 1.4E-05 4.7E-10 78.1 8.9 57 388-447 7-66 (100)
264 4gmv_A RAS-associated and plec 98.0 6.9E-06 2.4E-10 94.4 7.6 96 3-106 159-264 (281)
265 4ejn_A RAC-alpha serine/threon 98.0 5E-06 1.7E-10 101.8 6.8 97 4-108 8-108 (446)
266 2kl1_A YLBL protein; structure 98.0 7E-06 2.4E-10 79.3 6.4 57 388-447 5-64 (94)
267 2i4s_A General secretion pathw 98.0 1.4E-05 4.8E-10 78.7 8.1 58 389-446 38-96 (105)
268 1fc6_A Photosystem II D1 prote 97.9 2.3E-05 7.8E-10 94.7 10.9 74 367-446 84-159 (388)
269 2l97_A HTRA, putative serine p 97.9 1.6E-05 5.6E-10 81.8 7.7 57 388-447 57-116 (134)
270 3suz_A Amyloid beta A4 precurs 97.9 1.5E-06 5.2E-11 105.0 -0.0 65 367-444 307-372 (388)
271 1w9e_A Syntenin 1; cell adhesi 97.9 5.6E-05 1.9E-09 80.3 11.3 75 355-443 88-163 (166)
272 1v5m_A SH2 and PH domain-conta 97.8 4.5E-05 1.5E-09 76.9 9.3 82 19-106 38-128 (136)
273 3rle_A Golgi reassembly-stacki 97.7 3.5E-05 1.2E-09 85.3 7.4 58 388-446 16-76 (209)
274 1lcy_A HTRA2 serine protease; 97.7 5.1E-05 1.8E-09 89.5 8.5 58 388-447 256-313 (325)
275 4fgm_A Aminopeptidase N family 97.7 5.2E-05 1.8E-09 96.4 8.6 71 368-447 485-555 (597)
276 3k50_A Putative S41 protease; 97.7 4.8E-05 1.6E-09 92.2 7.5 56 389-447 91-147 (403)
277 3stj_A Protease DEGQ; serine p 97.6 7.4E-05 2.5E-09 88.9 8.0 58 388-447 263-323 (345)
278 1te0_A Protease DEGS; two doma 97.5 0.00012 3.9E-09 86.2 8.3 58 388-447 244-304 (318)
279 3pv2_A DEGQ; trypsin fold, PDZ 97.5 0.00018 6.1E-09 88.7 10.0 58 388-447 386-444 (451)
280 2hga_A Conserved protein MTH13 97.5 0.00016 5.3E-09 73.7 7.8 55 388-446 25-82 (125)
281 3rle_A Golgi reassembly-stacki 97.5 0.00037 1.3E-08 77.0 11.3 74 367-446 94-170 (209)
282 4a8c_A Periplasmic PH-dependen 97.5 0.00015 5.2E-09 88.9 8.2 58 388-447 363-421 (436)
283 1y8t_A Hypothetical protein RV 97.4 0.00023 7.7E-09 83.9 8.1 70 368-446 229-302 (324)
284 4a8c_A Periplasmic PH-dependen 97.3 0.00031 1E-08 86.2 8.7 58 388-447 263-323 (436)
285 4gou_A EHRGS-rhogef; RGS domai 97.3 0.0025 8.6E-08 70.0 14.0 170 595-784 189-370 (518)
286 3pv2_A DEGQ; trypsin fold, PDZ 97.3 0.0003 1E-08 86.6 7.8 58 388-447 282-342 (451)
287 3qo6_A Protease DO-like 1, chl 97.2 0.00035 1.2E-08 83.1 7.5 58 388-447 251-322 (348)
288 3num_A Serine protease HTRA1; 97.2 5.1E-05 1.7E-09 89.8 0.0 59 388-448 254-312 (332)
289 1c1y_B Proto-onkogene serine/t 97.1 0.00038 1.3E-08 64.0 4.4 39 276-314 3-41 (77)
290 1wxm_A A-RAF proto-oncogene se 97.1 0.00057 2E-08 64.0 5.4 40 275-314 8-47 (86)
291 3ny5_A Serine/threonine-protei 96.8 0.00095 3.3E-08 63.6 4.6 41 274-314 13-53 (96)
292 1ky9_A Protease DO, DEGP, HTRA 96.8 0.00045 1.5E-08 85.0 3.1 58 388-447 286-346 (448)
293 2l05_A Serine/threonine-protei 96.8 0.0008 2.7E-08 64.0 3.7 41 274-314 17-57 (95)
294 1ky9_A Protease DO, DEGP, HTRA 96.7 0.00024 8.1E-09 87.5 0.0 58 388-447 383-441 (448)
295 1w1g_A HPDK1, 3-phosphoinositi 96.6 0.0022 7.7E-08 66.7 6.6 77 23-111 66-142 (151)
296 1k32_A Tricorn protease; prote 96.3 0.0047 1.6E-07 83.4 8.8 67 367-445 736-814 (1045)
297 3ml4_A Protein DOK-7; tyrosine 96.1 0.0082 2.8E-07 66.0 7.4 85 19-106 19-111 (224)
298 2coa_A Protein kinase C, D2 ty 96.1 0.015 5.2E-07 58.5 8.6 91 5-107 11-118 (125)
299 2d9z_A Protein kinase C, NU ty 96.0 0.031 1.1E-06 56.5 10.5 91 5-107 11-122 (129)
300 4fln_A Protease DO-like 2, chl 95.9 0.0087 3E-07 74.8 7.1 60 388-448 277-347 (539)
301 1rrb_A RAF-1 RBD, RAF proto-on 95.8 0.0067 2.3E-07 58.8 4.2 40 275-314 19-58 (107)
302 2al3_A TUG long isoform; TUG U 95.0 0.019 6.5E-07 54.7 4.4 45 276-320 11-55 (90)
303 1v61_A RAC/CDC42 guanine nucle 94.7 0.072 2.5E-06 54.6 8.2 83 23-109 45-127 (132)
304 3qwm_A Iqsec1, IQ motif and SE 94.6 0.19 6.3E-06 51.9 11.1 86 22-108 32-122 (140)
305 1zc3_B Exocyst complex protein 94.2 0.12 4E-06 51.6 8.3 80 25-108 27-107 (113)
306 2dfk_A Collybistin II; DH doma 94.0 0.36 1.2E-05 58.3 13.8 86 21-108 271-363 (402)
307 4djk_A Probable glutamate/gamm 93.7 0.53 1.8E-05 58.0 15.0 117 1011-1133 136-260 (511)
308 1dbh_A Protein (human SOS 1); 93.3 0.19 6.4E-06 59.5 9.4 87 22-108 258-349 (354)
309 4fln_A Protease DO-like 2, chl 93.2 0.11 3.8E-06 65.0 7.5 53 388-442 415-469 (539)
310 3mpx_A FYVE, rhogef and PH dom 91.9 0.32 1.1E-05 59.1 9.1 82 21-108 256-337 (434)
311 3l1l_A Arginine/agmatine antip 91.2 1.6 5.5E-05 52.6 14.3 118 1010-1133 130-250 (445)
312 2z0q_A XPLN, RHO guanine nucle 91.1 0.42 1.4E-05 56.3 8.7 84 24-107 244-345 (346)
313 1nty_A Triple functional domai 90.4 0.76 2.6E-05 53.3 10.0 86 21-108 219-308 (311)
314 3zvr_A Dynamin-1; hydrolase, D 89.7 0.85 2.9E-05 59.4 10.5 93 5-106 543-643 (772)
315 2pz1_A RHO guanine nucleotide 89.6 1.1 3.7E-05 55.1 11.0 86 21-108 348-440 (466)
316 3ky9_A Proto-oncogene VAV; cal 89.6 0.62 2.1E-05 59.1 9.0 84 20-108 419-507 (587)
317 2vrw_B P95VAV, VAV1, proto-onc 89.6 0.75 2.6E-05 55.4 9.4 84 20-108 247-335 (406)
318 3gia_A Uncharacterized protein 89.6 0.71 2.4E-05 55.8 9.2 119 1007-1132 127-246 (444)
319 3t06_A PDZ-rhogef, RHO guanine 89.5 1.1 3.9E-05 54.0 10.9 87 20-109 307-409 (418)
320 3ksy_A SOS-1, SON of sevenless 89.3 1.1 3.7E-05 60.7 11.4 83 24-106 457-544 (1049)
321 2jln_A MHP1; hydantoin, transp 88.8 3.4 0.00012 51.4 14.6 45 1007-1051 144-188 (501)
322 1xcg_A PDZ-rhogef, RHO guanine 88.0 2.5 8.7E-05 50.0 12.3 86 20-108 265-366 (368)
323 2lg1_A A-kinase anchor protein 87.0 2.5 8.6E-05 45.6 10.4 88 20-109 83-173 (185)
324 1z87_A Alpha-1-syntrophin; pro 86.2 0.96 3.3E-05 51.6 6.8 55 54-108 206-262 (263)
325 3odw_A RHO guanine nucleotide 85.9 2 6.9E-05 53.9 10.3 87 21-109 425-525 (536)
326 1txd_A RHO guanine nucleotide 85.8 1.6 5.3E-05 52.2 8.9 87 21-109 270-370 (385)
327 3p6a_A RHO guanine nucleotide 84.2 2.7 9.1E-05 49.9 9.8 88 20-109 271-372 (377)
328 3tfm_A Myosin X; split PH doma 83.6 1.2 4.1E-05 49.5 6.0 53 52-105 174-226 (228)
329 1kz7_A Guanine nucleotide exch 83.2 2.7 9.1E-05 49.7 9.1 87 21-109 235-326 (353)
330 2rgn_B RHOA/RAC/CDC42 exchange 82.0 2.5 8.7E-05 49.9 8.4 86 21-108 226-318 (354)
331 1foe_A T-lymphoma invasion and 81.2 8.7 0.0003 45.6 12.7 95 23-117 259-375 (377)
332 3jzy_A Intersectin 2; C2 domai 80.6 0.33 1.1E-05 60.2 0.0 87 21-108 263-362 (510)
333 2adz_A Alpha-1-syntrophin; pro 80.3 2.6 8.8E-05 45.2 6.7 55 54-108 121-177 (178)
334 2daj_A KIAA0977 protein, COBL- 75.0 2.6 9.1E-05 39.5 4.2 49 271-320 5-55 (91)
335 1wgr_A Growth factor receptor- 66.6 5.2 0.00018 38.9 4.5 41 276-316 11-51 (100)
336 2ke4_A CDC42-interacting prote 63.8 3.2 0.00011 40.3 2.4 35 158-192 57-91 (98)
337 1dyn_A Dynamin; signal transdu 63.1 19 0.00064 36.5 7.8 56 1335-1391 56-112 (125)
338 3v5w_A G-protein coupled recep 62.3 21 0.00072 46.0 10.2 80 20-108 573-652 (689)
339 3qij_A Protein 4.1; cytoskelet 58.8 10 0.00034 43.8 5.9 48 274-321 17-65 (296)
340 1mai_A Phospholipase C delta-1 55.2 66 0.0023 32.3 10.6 94 5-108 15-121 (131)
341 2al6_A Focal adhesion kinase 1 54.4 9.7 0.00033 45.4 4.9 48 275-322 8-60 (375)
342 2j0j_A Focal adhesion kinase 1 53.6 11 0.00037 48.3 5.5 48 276-323 9-61 (656)
343 1zc3_B Exocyst complex protein 51.1 41 0.0014 33.2 8.0 62 1330-1400 50-111 (113)
344 2coc_A FYVE, rhogef and PH dom 50.3 34 0.0012 33.7 7.3 52 1336-1395 53-105 (112)
345 1btk_A Bruton'S tyrosine kinas 49.2 24 0.00082 37.2 6.4 35 1355-1397 99-133 (169)
346 2jxx_A Nfatc2-interacting prot 48.7 17 0.00058 35.1 4.7 48 275-326 26-74 (97)
347 3ivf_A Talin-1; FERM domain, c 48.6 13 0.00046 44.0 4.9 46 274-319 85-131 (371)
348 1v89_A Hypothetical protein KI 48.2 39 0.0013 32.2 7.4 62 1336-1397 51-113 (118)
349 3dor_A Protein CT_858, CPAF; m 47.5 14 0.00049 46.3 4.9 73 332-421 52-125 (583)
350 1ef1_A Moesin; membrane, FERM 47.5 14 0.0005 42.1 4.8 45 276-321 3-48 (294)
351 2kc2_A Talin-1, F1; FERM, adhe 46.1 17 0.00057 37.0 4.3 42 275-316 12-53 (128)
352 4eku_A Protein-tyrosine kinase 45.8 17 0.00057 43.8 5.1 72 273-347 20-102 (392)
353 3pge_A SUMO-modified prolifera 45.8 92 0.0032 33.9 10.4 137 275-442 30-171 (200)
354 1v61_A RAC/CDC42 guanine nucle 45.6 25 0.00087 35.8 5.7 60 1329-1396 67-126 (132)
355 2io0_B Small ubiquitin-related 45.6 29 0.00099 33.0 5.7 45 275-321 6-50 (91)
356 4ain_A Glycine betaine transpo 44.8 19 0.00065 44.8 5.5 183 1005-1199 243-437 (539)
357 1wg7_A Dedicator of cytokinesi 43.7 28 0.00096 35.2 5.8 58 1336-1402 73-130 (150)
358 2d9x_A Oxysterol binding prote 42.2 43 0.0015 32.5 6.6 57 1336-1403 55-111 (120)
359 2io1_B Small ubiquitin-related 41.0 32 0.0011 32.8 5.3 46 274-321 7-52 (94)
360 2d07_B Ubiquitin-like protein 41.0 37 0.0013 32.3 5.7 39 275-313 18-56 (93)
361 1h4r_A Merlin; FERM, neurofibr 39.5 21 0.0007 41.3 4.4 46 274-320 22-68 (314)
362 3qwm_A Iqsec1, IQ motif and SE 37.2 50 0.0017 34.0 6.2 65 1329-1398 59-124 (140)
363 1v88_A Oxysterol binding prote 36.4 47 0.0016 33.4 6.0 59 1336-1396 50-124 (130)
364 2k8h_A Small ubiquitin protein 36.0 72 0.0025 31.4 7.0 39 275-313 27-65 (110)
365 1wm3_A Ubiquitin-like protein 35.9 31 0.0011 31.0 4.1 44 276-321 3-46 (72)
366 1wz0_A Ubiquitin-like protein 35.7 54 0.0018 32.0 6.0 39 275-313 25-63 (104)
367 1wi1_A Calcium-dependent activ 35.5 76 0.0026 32.1 7.2 53 1336-1396 56-110 (126)
368 3au4_A Myosin-X; protein-prote 34.3 29 0.001 43.5 4.9 45 275-319 217-263 (555)
369 2lul_A Tyrosine-protein kinase 34.1 54 0.0018 34.1 6.2 41 1351-1399 84-124 (164)
370 2w2x_D 1-phosphatidylinositol- 33.9 80 0.0027 31.1 7.2 56 1336-1396 64-119 (124)
371 1u5d_A SKAP55, SRC kinase-asso 33.9 66 0.0022 30.0 6.3 55 1336-1397 50-106 (108)
372 3kyd_D Small ubiquitin-related 33.5 51 0.0017 32.9 5.4 71 275-354 41-112 (115)
373 4gmv_A RAS-associated and plec 32.3 65 0.0022 37.0 6.9 67 276-344 33-99 (281)
374 3dbh_I NEDD8; cell cycle, acti 29.4 82 0.0028 28.7 6.0 44 274-317 12-55 (88)
375 2i1j_A Moesin; FERM, coiled-co 29.2 44 0.0015 42.2 5.2 46 275-321 5-51 (575)
376 1pls_A Pleckstrin homology dom 28.9 1.1E+02 0.0036 29.1 7.0 56 1336-1398 48-103 (113)
377 1x1f_A Signal-transducing adap 28.2 72 0.0025 32.9 5.8 35 1354-1396 79-113 (149)
378 1fgy_A GRP1; PH domain, signal 27.3 99 0.0034 29.8 6.5 61 1336-1398 48-122 (127)
379 2da0_A 130-kDa phosphatidylino 27.1 90 0.0031 29.9 6.1 41 1354-1402 67-107 (114)
380 1fho_A UNC-89; pleckstrin homo 26.7 1.4E+02 0.0048 29.7 7.4 80 24-105 26-109 (119)
381 3mtn_B UBA80, ubcep1, ubiquiti 26.1 72 0.0025 28.8 4.9 42 276-317 5-46 (85)
382 3a4r_A Nfatc2-interacting prot 25.6 92 0.0031 28.5 5.4 46 274-321 7-53 (79)
383 1a62_A RHO; transcription term 25.4 36 0.0012 34.6 2.8 39 368-415 60-100 (130)
384 2wsw_A BCCT family betaine/car 25.3 1.2E+02 0.0039 37.8 7.8 66 1043-1113 107-181 (509)
385 3qx1_A FAS-associated factor 1 24.7 99 0.0034 28.5 5.6 41 270-311 3-43 (84)
386 1ndd_A NEDD8, protein (ubiquit 24.4 75 0.0026 27.9 4.5 41 277-317 3-43 (76)
387 2dhk_A TBC1 domain family memb 23.9 2E+02 0.0069 27.7 8.0 31 1371-1401 79-109 (119)
388 2dhz_A RAP guanine nucleotide 23.9 1.3E+02 0.0045 30.1 6.4 38 274-311 9-46 (120)
389 3a9j_A Ubiquitin; protein comp 23.9 72 0.0024 28.0 4.3 41 277-317 3-43 (76)
390 2p0d_A RHO GTPase-activating p 23.9 1.5E+02 0.0051 29.4 7.1 57 1336-1400 72-128 (129)
391 2uyz_B Small ubiquitin-related 23.8 64 0.0022 28.9 4.0 39 276-314 5-43 (79)
392 2y7b_A Actin-binding protein a 23.7 1.2E+02 0.0041 29.6 6.4 28 1370-1397 102-129 (134)
393 1wgy_A RAP guanine nucleotide 23.2 60 0.002 31.8 3.7 38 274-311 9-46 (104)
394 2dzi_A Ubiquitin-like protein 23.2 1.3E+02 0.0045 26.7 6.0 44 274-317 7-50 (81)
395 3pvl_A Myosin VIIA isoform 1; 23.1 61 0.0021 41.5 5.0 45 275-319 264-309 (655)
396 1fao_A Dual adaptor of phospho 23.0 1.2E+02 0.004 29.4 6.1 56 1336-1402 61-117 (126)
397 1wh3_A 59 kDa 2'-5'-oligoadeny 23.0 1.1E+02 0.0039 27.7 5.6 45 274-318 7-51 (87)
398 3dh4_A Sodium/glucose cotransp 23.0 3.4E+02 0.012 33.5 11.7 44 1160-1205 308-351 (530)
399 1u5e_A SRC-associated adaptor 22.9 1.1E+02 0.0039 33.2 6.5 55 1336-1397 153-209 (211)
400 3n3k_B Ubiquitin; hydrolase, p 21.7 63 0.0022 29.2 3.5 40 276-315 5-44 (85)
401 2yry_A Pleckstrin homology dom 21.4 1.2E+02 0.004 29.1 5.6 54 1336-1396 66-120 (122)
402 3rcp_A Pleckstrin homology dom 21.3 87 0.003 29.2 4.6 51 1336-1397 44-94 (103)
403 3hk0_A Growth factor receptor- 20.8 1.6E+02 0.0054 33.3 7.2 48 276-323 10-57 (256)
404 2i5f_A Pleckstrin; PH domain, 20.8 1.1E+02 0.0038 28.6 5.2 54 1336-1396 52-109 (109)
405 3cxb_B Pleckstrin homology dom 20.6 1.2E+02 0.004 29.3 5.4 40 1351-1397 63-102 (112)
406 2eke_C Ubiquitin-like protein 20.4 1.1E+02 0.0038 29.9 5.1 44 275-321 32-75 (106)
No 1
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=100.00 E-value=3.8e-78 Score=746.24 Aligned_cols=435 Identities=20% Similarity=0.330 Sum_probs=386.5
Q ss_pred cccccccccccchhhhhHHhhhheeeeccCCCc--ccccccchhHhHHHHHhhhcchhhhHHHhhhh----ccCCChhhh
Q psy8107 839 GWYWQITWRFLGPAIMSCILVSSIICRFLKKPS--YSAWNRAFLIPFMVMLILEGIPLFLIELGIGQ----KMRLGSLGV 912 (1613)
Q Consensus 839 ~~yWk~cW~fItP~il~~I~i~~ii~~~~~~P~--Y~~~g~~FLIpYli~l~liGlPll~lElalGQ----~~r~g~i~a 912 (1613)
+.-|...+.|+..+++.+|+++|+ ||+|+ |.||||||+|||+++++++|+|++++|+++|| ++|+|++++
T Consensus 5 R~~W~sr~~FiLa~~G~AVGLGNi----WRFPyl~~~nGGgAFlipYli~l~~~GiPll~~E~alGq~~~~~~r~~~i~a 80 (519)
T 2a65_A 5 REHWATRLGLILAMAGNAVGLGNF----LRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGHGTTPAI 80 (519)
T ss_dssp CCCCSCHHHHHHHHHHHHSSHHHH----THHHHHHHHTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTTCCSHHHH
T ss_pred cccCCcHHHHHHHHHHHHhcccHH----HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHhcccchhccCCCHHHH
Confidence 357999999999999999999987 89996 88999999999999999999999999999999 888999999
Q ss_pred hhhhhhc--ccccchhhHHHHHHHHhhhhHHHHHHHHHHHhhcccCCC--CCCCCCCCCCCcCCcccCCchhhhhhhhhc
Q psy8107 913 WNTIHPW--LGGVGISSCLVTFFVALYYNVIITWCFYYLFNSFSSSLP--WSSCPTDHNGTIIPECELSSETAYFWYRTT 988 (1613)
Q Consensus 913 ~~~i~p~--~~GvG~~~~li~~li~~YYsVi~aW~L~Y~~~Sf~~~lp--W~~C~~~~n~~~~~~C~~s~~~~~f~~~~v 988 (1613)
|++++|. |+|+|++++++++++++||+||+||+++|+++||++++| |.+|++ .+|. .++..+|| +++
T Consensus 81 ~~~l~~~~~~~giG~~~v~~~~~i~~yY~vi~gW~l~Y~~~s~~~~lp~~w~~~~~-------~~~~-~~~~~~~f-~~~ 151 (519)
T 2a65_A 81 FYLLWRNRFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPPNATD-------PDSI-LRPFKEFL-YSY 151 (519)
T ss_dssp HHHHSCSHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC--CC-------HHHH-HHHHHHHH-HHH
T ss_pred HHHhcCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCC-------cccc-cCcHHHHH-HHH
Confidence 9999865 999999999999999999999999999999999999999 765421 0110 12233444 567
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHHHHHhhhccc-ccceeeeeehhhHHHHHHHHHHHHhccCCC----hhccceeee
Q psy8107 989 LDVSPNIESPGSPKWWIVLCLLLAWIIVFFIVMKGI-QSSGRVVYFTSMFPYIVLTIFFIRGITLPG----AGAGLVHMY 1063 (1613)
Q Consensus 989 L~~s~~i~~~g~~~~~l~l~l~l~w~iv~~~v~kGI-~~~gKv~~~~~l~P~vlL~iLlir~ltL~G----a~~Gl~~lf 1063 (1613)
++.++++++.|.+.|.+++|++++|++++++++||| +..+|++++++.+|++++++|++|++|||| |.+|++|+|
T Consensus 152 l~~~~~~~~~g~~~~~~~~~~~~~w~i~~~ii~~Gv~kgiek~~~~~mp~l~vlliiL~ir~ltLpGp~~~A~~Gl~~~~ 231 (519)
T 2a65_A 152 IGVPKGDEPILKPSLFAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLW 231 (519)
T ss_dssp HTCCSSSSCBCCCCHHHHHHHHHHHHHHHHHHTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEHHHHHHHHH
T ss_pred HCCCCCcccccCccHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHh
Confidence 888889999999999999999999999999999999 567999999999999999999999999999 999999999
Q ss_pred ccccccccChhHHHHHHhhHHHhhcccccceehhccccCCCCccccceehhhhhHHHHHHHHHHHHHhhhcccccccccc
Q psy8107 1064 TPKVEKLLDPNVWLDAATQVFYSFGLAFGSLIAFGSYNQPNNNCVRDVIMVSICNALTAIYASVVVFAILGFKAMSNAAE 1143 (1613)
Q Consensus 1064 ~Pd~s~L~~~~vW~~A~~QaFfSLslG~G~mitygSY~~~~~ni~rda~~v~~~n~~vSllAgl~IFsilG~~a~~~~~~ 1143 (1613)
+|||++|.|+++|++|++|+|||||+|+|+|++||||+++++|+.+|+++++++|+++|++||++||+++||++.
T Consensus 232 ~Pd~s~L~~~~vw~~A~gQ~FFSLslG~G~~ity~SY~~~~~n~~~~a~~v~~~n~~~sllaG~~IF~~lgf~a~----- 306 (519)
T 2a65_A 232 TPDFEKLKDPGVWIAAVGQIFFTLSLGFGAIITYASYVRKDQDIVLSGLTAATLNEKAEVILGGSISIPAAVAFF----- 306 (519)
T ss_dssp SCCTTSTTCHHHHHHHHHHHHHHHTTTSSHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH-----
T ss_pred cCCHHHhCCHHHHHHHHHHHHHHhHHHHhHHhhhhcccCCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999762
Q ss_pred CCC-ceecccCC-CceehHHHHHHHHhCCChhHHHHHHHHHHHHHhhhhcchhhhhhhhhhhhcccccccchhhhhHh--
Q psy8107 1144 GTG-LAFIAAEG-TGLAFIVFTQAIVELPGAPFWSIIFFMMLLSLGLGSQIGILEGVLCTIFDIEIFKRIRKPILTEA-- 1219 (1613)
Q Consensus 1144 ~~~-i~~~~~~G-~gL~Fi~lP~af~~mp~g~l~avLFFl~L~lagltS~isllE~iVt~l~D~~~~~r~~~~~~~~~-- 1219 (1613)
+.+ +.++.++| |||+|++||++|++||+|++|+++||+|+++||+||+++++|++++.++|+++++|++..+++.+
T Consensus 307 g~~~~~~v~~~G~pgL~Fi~~P~af~~mp~g~~~~~lFF~~l~~agltS~i~~~E~~vt~l~D~~~~~R~~~~~~v~~~~ 386 (519)
T 2a65_A 307 GVANAVAIAKAGAFNLGFITLPAIFSQTAGGTFLGFLWFFLLFFAGLTSSIAIMQPMIAFLEDELKLSRKHAVLWTAAIV 386 (519)
T ss_dssp CHHHHHHHHHHCSSHHHHTHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred CCcchHHHhcCCCCceeHHHHHHHHHhCCCccchHHHHHHHHHHHHHHHHHHHhhHhHHHHHHhhCCcHHHHHHHHHHHH
Confidence 223 33455788 99999999999999999999999999999999999999999999999999999888777665544
Q ss_pred -hhhhhhcchh-hhHHHHHHHhhcceeeeeeeccccccceeccccCCceEEEEeE-eeechhhhhhcccCCccceeeehh
Q psy8107 1220 -LKGMEKVAEH-INEMQRIHEEYGAIFDHLFRQHQKSCKQPIDLSPGDLLYYGGV-EWLNISDFLGKIKKGLELHAMCFV 1296 (1613)
Q Consensus 1220 -l~gL~~vt~g-G~y~~~l~d~yga~f~ll~~~~~~~l~e~Ials~~~lwiyg~~-~~~~i~~mlg~~~~~~~~w~~~w~ 1296 (1613)
++|+++++++ | ++++|+|.+.+.+.+. +++|++.++ |+||.. +..+++.|.+. +.+ .+|++||+
T Consensus 387 fllgl~~~~~~~g---~~~~D~~~~~~~l~~~----~l~~~i~v~----wv~g~~~~~~~i~~~~~~-~~~-~~w~~~~~ 453 (519)
T 2a65_A 387 FFSAHLVMFLNKS---LDEMDFWAGTIGVVFF----GLTELIIFF----WIFGADKAWEEINRGGII-KVP-RIYYYVMR 453 (519)
T ss_dssp HHHHHHHHHBTTH---HHHHHHHTTTHHHHHH----HHHHHHHHH----TTSCHHHHHHHHHTTCSS-CCC-THHHHHHH
T ss_pred HHHHHHHHcCCCC---cchHHHHHhHHHHHHH----HHHHHHhhh----eeeehhHHHHHHHcccCC-chH-HHHHHeEE
Confidence 4588899887 6 8899999877766665 899999888 999984 45578777665 333 68999999
Q ss_pred hhhhhhee
Q psy8107 1297 FKSAVVFL 1304 (1613)
Q Consensus 1297 fitPvill 1304 (1613)
|++|++++
T Consensus 454 ~v~P~~l~ 461 (519)
T 2a65_A 454 YITPAFLA 461 (519)
T ss_dssp THHHHHHH
T ss_pred ehHHHHHH
Confidence 99998776
No 2
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=100.00 E-value=4.3e-51 Score=466.90 Aligned_cols=255 Identities=52% Similarity=0.909 Sum_probs=209.1
Q ss_pred CccccceEEecc-cccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEE
Q psy8107 1 FLSVKKWLLRKK-HQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLS 79 (1613)
Q Consensus 1 ~L~~Kg~L~~K~-~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~ 79 (1613)
||+.|.++..++ +|.+++++|+|+++||||+|+.|+||||+...+.+....|+++|+|+||.+++++||+||+|||+|+
T Consensus 16 ~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a~d~~kKk~vF~L~ 95 (279)
T 3a8n_A 16 ALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVPEHPKKDFVFCLS 95 (279)
T ss_dssp EEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEECCCTTSSSSCSCCCEE
T ss_pred EEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEEeccccCCCCcEEEEE
Confidence 344555555443 3667788999999999999999999999987666556688999999999999999999999999999
Q ss_pred cCCCCeEEeecCCHHHHHHHHHHHHHHHHhhhhccCCccccccccHHHHhhhhhccChHHHHHhHHHHHHhhhcCCcchh
Q psy8107 80 TAFGDAYLFQAPCQVELENWVNSIHSACAAAFARHRGKTGTLHLLQEEIFRLEKAIDSDNKLKHMADLQMSVLAEPETKQ 159 (1613)
Q Consensus 80 t~dg~~yLFQA~~~~em~~Wi~~I~~aaa~~~~r~~~~~~~~~l~~~e~~~~~~ki~~e~k~k~~~~~~~~~~~~~~~kk 159 (1613)
+++|++|||||+|++||++||++|+.|++...+++....++.++++.++.+++++++||.|+++|.+++++...|++.|+
T Consensus 96 t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~~~a~~~~~~~~~~~~r~~~~~l~~~~~~e~k~~~~~el~~s~~~d~~~k~ 175 (279)
T 3a8n_A 96 NSLGDAFLFQTTSQTELENWITAIHSACAAAVARHHHKEDTLRLLKSEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKK 175 (279)
T ss_dssp ETTTEEEECCCSCHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTTCCCGGGTT
T ss_pred cCCCCEEEEeCCCHHHHHHHHHHHHHHHhhhccccCCchhhhhhhcchhhhhHHhhcchhhhccchhhhhhcCCCchhhh
Confidence 99999999999999999999999999999877788888888999999999999999999999999999888999999999
Q ss_pred hhHHHHHHHHHhhhhhcccchhhhhhhhhhccCCCCCcccccccccccccccccccceeeeeceeEEeecCChhhhhhhh
Q psy8107 160 QINEQITQWEENLERLHCEQFRLRCYMASLQNGELPNPKSLLTHVSRNTKCILNNLGVFTVSSFHAFICARSPSLLNNLL 239 (1613)
Q Consensus 160 ~~~~~i~~~~~k~e~l~~e~~Ry~~Y~~~L~~~~lp~~~~ll~~~~~~t~~~~~rlg~fsvssfha~~~~r~~~~~~~~~ 239 (1613)
++..++++|++|+|||+||++|||||+++|+++++|+|++|++|+||||+.+|+++|||+|++|||+||+|+
T Consensus 176 ~~~~~~~~~e~~~~~l~~e~~R~~~y~~~l~~~~~~~~~~l~~~~~rpt~~~l~~~gi~~~~g~~~~v~~r~-------- 247 (279)
T 3a8n_A 176 TILDQIFVWEQNLEQFQMDLFRFRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVSSFHALVAART-------- 247 (279)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCCCCHHHHHHTCCHHHHHHTTTSSTTCTTHHHHTTTTTC--------
T ss_pred hhhHHHHHHHhHhhhhhhhhhhHhhhHhhhccCcCccHHHHHHHhcCcchhhHhhCceeeccCchHhhhccc--------
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCCCCCccCCCCCCCCccccc
Q psy8107 240 AGRGATKRRPPLLSRSNSGSSRRSLQS 266 (1613)
Q Consensus 240 ~~~~~~~~~~~~~s~~~~~~~~~~~~~ 266 (1613)
++++.|||++.+||+++ +||++++
T Consensus 248 -~~~~~~~~~~~~~~~~~--~~~~~~~ 271 (279)
T 3a8n_A 248 -GEIGVRRRTQAMSRSAS--KRRSRFS 271 (279)
T ss_dssp ---------------------------
T ss_pred -cccchhccccccCcccc--cccccch
Confidence 56778888999999766 6666543
No 3
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=100.00 E-value=3e-43 Score=403.40 Aligned_cols=236 Identities=50% Similarity=0.915 Sum_probs=207.9
Q ss_pred cccceEEec-------ccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCce
Q psy8107 3 SVKKWLLRK-------KHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYI 75 (1613)
Q Consensus 3 ~~Kg~L~~K-------~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nV 75 (1613)
..+|||.+| ++++.+.+.++||++|+||+|+.|++|||+..........|.+.|+|.+|.+..+.|++||+|+
T Consensus 12 ~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~kk~~~ 91 (263)
T 3a8p_A 12 RKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSVPEHPKKEHV 91 (263)
T ss_dssp EEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEECTTCSSCSSE
T ss_pred EEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEECCcCCCCCCE
Confidence 457898854 3343344578999999999999999999986543334567889999999999999999999999
Q ss_pred EEEEcCCCCeEEeecCCHHHHHHHHHHHHHHHHhhhhccCCccccccccHHHHhhhhhccChHHHHHhHHHHHHhhhcCC
Q psy8107 76 FCLSTAFGDAYLFQAPCQVELENWVNSIHSACAAAFARHRGKTGTLHLLQEEIFRLEKAIDSDNKLKHMADLQMSVLAEP 155 (1613)
Q Consensus 76 F~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa~~~~r~~~~~~~~~l~~~e~~~~~~ki~~e~k~k~~~~~~~~~~~~~ 155 (1613)
|+|.|+++++|+|||+|++||++||++|+.|++..++++...+++.+..+..+.++++++++|.|+++|.+++++.+.|+
T Consensus 92 F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~k~~~~~~~~~s~~~~~ 171 (263)
T 3a8p_A 92 FCLSNSCGDVYLFQATSQTDLENWVTAIHSACASLFAKKHGKEDTVRLLKSQTRSLLQKIDMDSKMKKMAELQLSVVSDP 171 (263)
T ss_dssp EEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred EEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhcccccCCccchhhccccccccchhhhcCccccccchhhhhhcCCCc
Confidence 99999999999999999999999999999999988888888888888899999999999999999999999999999999
Q ss_pred cchhhhHHHHHHHHHhhhhhcccchhhhhhhhhhccCCCCCcccccccccccccccccccceeeeeceeEEeecCChhhh
Q psy8107 156 ETKQQINEQITQWEENLERLHCEQFRLRCYMASLQNGELPNPKSLLTHVSRNTKCILNNLGVFTVSSFHAFICARSPSLL 235 (1613)
Q Consensus 156 ~~kk~~~~~i~~~~~k~e~l~~e~~Ry~~Y~~~L~~~~lp~~~~ll~~~~~~t~~~~~rlg~fsvssfha~~~~r~~~~~ 235 (1613)
++|++...++..|++++|+|++|++||+||+++|++|++|+|++|++|+||||+.+|+++|||+||||||+||+|+|+++
T Consensus 172 ~~k~~~~~~~~~w~~~l~~~~~e~~r~~~~~a~l~~~~~~~~~~l~~~~~~~~~~~l~~~g~~~v~~~~~~v~~~~~~~~ 251 (263)
T 3a8p_A 172 KNRKAIENQIRQWEQNLEKFHMDLFRMRCYLASLQGGELPNPKSLLAATSRPSKLALGRLGVLSVSSFHALVCSRDDSTL 251 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHTTCCHHHHHHHHHHTCCSHHHHHHHHHHTC----
T ss_pred cccccccccccccccchhhccceeeEEEEEhhhhcCCCccchHHHHHHhcccccccccccEEEEeccceeeeeeccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhh
Q psy8107 236 NNL 238 (1613)
Q Consensus 236 ~~~ 238 (1613)
++|
T Consensus 252 ~~~ 254 (263)
T 3a8p_A 252 RKR 254 (263)
T ss_dssp ---
T ss_pred HHH
Confidence 876
No 4
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=100.00 E-value=1.2e-37 Score=375.35 Aligned_cols=198 Identities=55% Similarity=0.911 Sum_probs=178.5
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccc
Q psy8107 585 SRQLTDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKETFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEAD 664 (1613)
Q Consensus 585 ~~~~~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~ 664 (1613)
.+..++++||+++++||++||++||++|+.+.+.|+.||+..++++.++++.||+||++|+++|+.||.+|+++...+++
T Consensus 3 ~~~ls~~~kr~~vi~Eli~TE~~Yv~~L~~l~~~y~~pl~~~~~l~~~~~~~iF~ni~~I~~~h~~fl~~L~~~~~~~~~ 82 (377)
T 1foe_A 3 GRQLSDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTQDELDVLFGNLTEMVEFQVEFLKTLEDGVRLVPD 82 (377)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHTSSSSCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 35667899999999999999999999999999999999999889999999999999999999999999999999988765
Q ss_pred cCCCCCccchhhhHhhHHHHHhhhccccchhhHHHhchHHHHHHHhhccCChHHHHHHHhhCCCCCCCCCccccccccch
Q psy8107 665 FHHFDQSSQFKNILFSIGSAFLYYVNHFKLYSSFCASHSKAQKVLHPNEGNQALQEFLSSRNPRQQHSSTLESYLIKPIQ 744 (1613)
Q Consensus 665 ~~~~~~~~~~~~~i~~IGdvFl~~~~~fk~Y~~Yc~n~~~a~~~L~~~~~~~~f~~fl~~~~~~~~~~l~L~slLikPVQ 744 (1613)
.+..+...++.+....||++|+++.+.|++|..||.||+.+.+.+.++++++.|+.|+++++...+++++|.+||++|||
T Consensus 83 ~~~~~~~~~~~~~~~~ig~~f~~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~~~f~~fl~~~~~~~~~~l~L~s~Li~PvQ 162 (377)
T 1foe_A 83 LEKLEKVDQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRQQHSSTLESYLIKPIQ 162 (377)
T ss_dssp GGGCCSGGGGHHHHHHHHHHHHHHTTGGGGHHHHHHHTTTHHHHHTTTTTCHHHHHHHHHHCTTCCGGGSHHHHTTHHHH
T ss_pred chhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHhhccccCcCHHHHhccchh
Confidence 44444445666777889999999999999999999999999999999999999999999998877788999999999999
Q ss_pred hhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhc
Q psy8107 745 RILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVG 782 (1613)
Q Consensus 745 RI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLig 782 (1613)
||+||+|||++|+|+|+++|+||..+..|+..+..++.
T Consensus 163 Ri~rY~LLL~~llk~t~~~~~d~~~l~~Al~~~~~v~~ 200 (377)
T 1foe_A 163 RVLKYPLLLRELFALTDAESEEHYHLDVAIKTMNKVAS 200 (377)
T ss_dssp HHTTHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999977655554443
No 5
>1by1_A Protein (PIX); RHO-GTPase exchange factor, transport protein; NMR {Homo sapiens} SCOP: a.87.1.1
Probab=99.97 E-value=3.4e-31 Score=294.13 Aligned_cols=181 Identities=29% Similarity=0.463 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccccCCCCC
Q psy8107 591 AEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKETFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEADFHHFDQ 670 (1613)
Q Consensus 591 ~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~~~~~~~ 670 (1613)
..+|+++++||++||++||++|+.+.+.|+.||+..++++.++++.||+|+++|+++|+.||.+|+++...|...+
T Consensus 11 ~~~R~~vi~ELi~TE~~Yv~~L~~l~~~y~~pl~~~~~l~~~~~~~iF~ni~~i~~~h~~fl~~L~~~~~~~~~~~---- 86 (209)
T 1by1_A 11 KSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQ---- 86 (209)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSSSGGGTTHHHHHHHHHHHHHHHHHHHHHHHTTCSSC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHcCHHHHHHHHHHHHHHHHHHHcCCcchh----
Confidence 3568999999999999999999999999999999988999999999999999999999999999999998775432
Q ss_pred ccchhhhHhhHHHHHhhhccccc-hhhHHHhchHHHHHHHhhccCChHHHHHHHhhCCCCCCCCCccccccccchhhhch
Q psy8107 671 SSQFKNILFSIGSAFLYYVNHFK-LYSSFCASHSKAQKVLHPNEGNQALQEFLSSRNPRQQHSSTLESYLIKPIQRILKY 749 (1613)
Q Consensus 671 ~~~~~~~i~~IGdvFl~~~~~fk-~Y~~Yc~n~~~a~~~L~~~~~~~~f~~fl~~~~~~~~~~l~L~slLikPVQRI~KY 749 (1613)
.||++|+++.+.|+ +|..||.||+.|...++++ ++.|+.|+++++...+++++|.+||++|||||+||
T Consensus 87 ---------~ig~~f~~~~~~f~~~Y~~Y~~n~~~a~~~l~~~--~~~f~~fl~~~~~~~~~~l~L~s~Li~PvQRi~rY 155 (209)
T 1by1_A 87 ---------RVGGCFLNLMPQMKTLYLTYCANHPSAVNVLTEH--SEELGEFMETKGASSPGILVLTTGLSKPFMRLDKY 155 (209)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTTHHHHTTTTCCCSSTTTHHHHHTTSTTTGGGTH
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CHHHHHHHHHhcCCCCCcCCHHHHhhHHHHHHhHH
Confidence 49999999999997 9999999999999999887 67899999999877778899999999999999999
Q ss_pred HHHHHHHhhcCCCCCcccchhhhHHHHHHhhhccccc
Q psy8107 750 PLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFT 786 (1613)
Q Consensus 750 ~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~ 786 (1613)
+|||++|+|+|+++|+||..+..|+..+..++..+|.
T Consensus 156 ~LLL~~Llk~t~~~h~d~~~l~~Al~~i~~v~~~iNe 192 (209)
T 1by1_A 156 PTLLKELERHMEDYHTDRQDIQKSMAAFKNLSAQCQE 192 (209)
T ss_dssp HHHHHHHHHSSCCCSSSTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999887775
No 6
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=99.96 E-value=7.9e-30 Score=303.74 Aligned_cols=189 Identities=22% Similarity=0.392 Sum_probs=165.2
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhccccc
Q psy8107 586 RQLTDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKETFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEADF 665 (1613)
Q Consensus 586 ~~~~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~~ 665 (1613)
.....+.||+++++||++||++||++|+.+.+.|+.||...++++.++++.||+|+++|+++|+.||.+|+++...|+..
T Consensus 12 ~l~~~~~kR~~vi~Eli~TE~~Yv~~L~~l~~~y~~~l~~~~~l~~~~~~~iF~ni~~i~~~h~~fl~~L~~~~~~~~~~ 91 (346)
T 2z0q_A 12 VLTAKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLIPLHEELLSQLRDVRKPDGST 91 (346)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTSSCHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCTTSCC
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 34456789999999999999999999999999999999998899999999999999999999999999999998776532
Q ss_pred CCCCCccchhhhHhhHHHHHhhhccccchhhHHHhchHHHHHHHhhccCChHHHHHHHhhCCC-CCCCCCccccccccch
Q psy8107 666 HHFDQSSQFKNILFSIGSAFLYYVNHFKLYSSFCASHSKAQKVLHPNEGNQALQEFLSSRNPR-QQHSSTLESYLIKPIQ 744 (1613)
Q Consensus 666 ~~~~~~~~~~~~i~~IGdvFl~~~~~fk~Y~~Yc~n~~~a~~~L~~~~~~~~f~~fl~~~~~~-~~~~l~L~slLikPVQ 744 (1613)
+ .||++|+++.+.|++|..||.||+.|...++++++++.|++|+++++.. .+++++|.+||++|||
T Consensus 92 ~-------------~ig~~f~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~f~~fl~~~~~~~~~~~l~L~~~L~~PvQ 158 (346)
T 2z0q_A 92 E-------------HVGPILVGWLPCLSSYDSYCSNQVAAKALLDHKKQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRS 158 (346)
T ss_dssp S-------------CCHHHHHHHGGGGGHHHHHHHHHHHHHHHHHHHTTCHHHHCC-------------CTTTGGGHHHH
T ss_pred c-------------hHHHHHHHHhhHHHHHHHHHHCHHHHHHHHHHhhcCHHHHHHHHHHHhCccCCCCCHHHHHHHHHH
Confidence 2 4999999999999999999999999999999999999999999998754 4578999999999999
Q ss_pred hhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhcccccc
Q psy8107 745 RILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFTT 787 (1613)
Q Consensus 745 RI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~T 787 (1613)
||+||+|||++|+|+|+++|+||..+..|+..+..+...+|..
T Consensus 159 Ri~rY~LLL~~llk~t~~~~~d~~~l~~A~~~~~~v~~~iN~~ 201 (346)
T 2z0q_A 159 RLVKYPLLLREILRHTPNDNPDQQHLEEAINIIQGIVAEINTK 201 (346)
T ss_dssp HHHHHHHHHHHHHHTSCTTSTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888877653
No 7
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A
Probab=99.96 E-value=3.9e-29 Score=289.25 Aligned_cols=190 Identities=22% Similarity=0.367 Sum_probs=172.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccccCC
Q psy8107 588 LTDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKETFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEADFHH 667 (1613)
Q Consensus 588 ~~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~~~~ 667 (1613)
...+.||+++++||++||++||++|+.+.+.|+.|+...++++.++++.||+|+++|+++|+.||.+|+.+...+.+..
T Consensus 77 ~~~e~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~l~~~~~l~~~~~~~iF~ni~~i~~~~~~fl~~L~~~~~~~~~~~- 155 (283)
T 3jv3_A 77 TPTERKRQGYIHELIVTEENYVNDLQLVTEIFQKPLTESELLTEKEVAMIFVNWKELIMCNIKLLKALRVRKKMSGEKM- 155 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHTTCSSCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTC-
T ss_pred cHHHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccccCCCCHHHHHHHccCHHHHHHHHHHHHHHHHHHHhccccCC-
Confidence 3457899999999999999999999999999999999999999999999999999999999999999999987654311
Q ss_pred CCCccchhhhHhhHHHHHhhhccccchhhHHHhchHHHHHHHhhc-cCChHHHHHHHhhCCCCC-CCCCccccccccchh
Q psy8107 668 FDQSSQFKNILFSIGSAFLYYVNHFKLYSSFCASHSKAQKVLHPN-EGNQALQEFLSSRNPRQQ-HSSTLESYLIKPIQR 745 (1613)
Q Consensus 668 ~~~~~~~~~~i~~IGdvFl~~~~~fk~Y~~Yc~n~~~a~~~L~~~-~~~~~f~~fl~~~~~~~~-~~l~L~slLikPVQR 745 (1613)
....||++|+++.+.|++|..||.||+.+...+.++ ++++.|++|++.++..+. ++++|.+||++||||
T Consensus 156 ---------~~~~ig~~f~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQR 226 (283)
T 3jv3_A 156 ---------PVKMIGDILSAQLPHMQPYIRFCSCQLNGAALIQQKTDEAPDFKEFVKRLAMDPRCKGMPLSSFILKPMQR 226 (283)
T ss_dssp ---------CCCCCHHHHHHHGGGGTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSGGGTTCCHHHHTTHHHHH
T ss_pred ---------chhHHHHHHHHHHhhchhHHHHHcCHHHHHHHHHHHHhcCHHHHHHHHHHHhCccccCCCHHHHhhhhHHH
Confidence 123599999999999999999999999999999885 788999999999887654 569999999999999
Q ss_pred hhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhcccccc
Q psy8107 746 ILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFTT 787 (1613)
Q Consensus 746 I~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~T 787 (1613)
|+||+|||++|+|+|+++|+||..+..|+..+..++..+|..
T Consensus 227 i~rY~LLL~~llk~t~~~~~d~~~l~~A~~~i~~v~~~iNe~ 268 (283)
T 3jv3_A 227 VTRYPLIIKNILENTPENHPDHSHLKHALEKAEELCSQVNEG 268 (283)
T ss_dssp HHHHHHHHHHHHTTSCTTSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999999999988877754
No 8
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=99.95 E-value=2.8e-28 Score=292.64 Aligned_cols=191 Identities=20% Similarity=0.293 Sum_probs=172.7
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhccccc
Q psy8107 586 RQLTDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKETFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEADF 665 (1613)
Q Consensus 586 ~~~~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~~ 665 (1613)
.....+.||+++++||++||++||++|+.+.+.|++||+..++++.++++.||+||++|+++|+.||.+|+++...++..
T Consensus 14 ~l~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~f~~~l~~~~~l~~~~~~~iF~ni~~i~~~h~~fl~~L~~~~~~~~~~ 93 (368)
T 1xcg_A 14 GLTQREIDRQEVINELFVTEASHLRTLRVLDLIFYQRMKKENLMPREELARLFPNLPELIEIHNSWCEAMKKLREEGPII 93 (368)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTSSCHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHTCSSC
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999998765532
Q ss_pred CCCCCccchhhhHhhHHHHHhhhcc------ccchhhHHHhchHHHHHHHhhc-cCChHHHHHHHhhCCCC-CCCCCccc
Q psy8107 666 HHFDQSSQFKNILFSIGSAFLYYVN------HFKLYSSFCASHSKAQKVLHPN-EGNQALQEFLSSRNPRQ-QHSSTLES 737 (1613)
Q Consensus 666 ~~~~~~~~~~~~i~~IGdvFl~~~~------~fk~Y~~Yc~n~~~a~~~L~~~-~~~~~f~~fl~~~~~~~-~~~l~L~s 737 (1613)
+ .||++|+++.+ .+++|..||.||+.|.+.++++ ++++.|+.|+++++..+ +++++|.+
T Consensus 94 ~-------------~ig~~f~~~~~~~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~f~~fl~~~~~~~~~~~l~L~~ 160 (368)
T 1xcg_A 94 K-------------EISDLMLARFDGPAREELQQVAAQFCSYQSIALELIKTKQRKESRFQLFMQEAESHPQCRRLQLRD 160 (368)
T ss_dssp C-------------CCHHHHHHHHSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHHHTSGGGTTCCHHH
T ss_pred C-------------cHHHHHHHHccchhHHHHHHHHHHHHhhHHHHHHHHHHHHhCCHHHHHHHHHHHhChhhccCChHH
Confidence 2 49999999864 4789999999999999999986 67999999999987665 57899999
Q ss_pred cccccchhhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhcccccccc
Q psy8107 738 YLIKPIQRILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFTTGA 789 (1613)
Q Consensus 738 lLikPVQRI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~T~g 789 (1613)
||++|||||+||+|||++|+|+|+++|+||..+..|+..+..++..+|....
T Consensus 161 ~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~A~~~~~~v~~~vN~~~~ 212 (368)
T 1xcg_A 161 LIISEMQRLTKYPLLLESIIKHTEGGTSEHEKLCRARDQCREILKYVNEAVK 212 (368)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhHhhhhhhHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999888775544
No 9
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=99.95 E-value=4.4e-28 Score=294.54 Aligned_cols=191 Identities=27% Similarity=0.444 Sum_probs=172.5
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccc
Q psy8107 586 RQLTDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKK-ETFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEAD 664 (1613)
Q Consensus 586 ~~~~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~-~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~ 664 (1613)
...+.+.+|+++++||++||++||++|+.+.+.|+.|+.+ .++++.++++.||+||++|+++|+.||.+|+++...+..
T Consensus 34 ~~~~~~~kR~~vi~ELl~TE~~Yv~~L~~l~~~y~~pl~~~~~~l~~~~~~~iF~ni~~I~~~h~~fL~~Le~~~~~~~~ 113 (402)
T 2dfk_A 34 PLQNRDQMRANVINEIMSTERHYIKHLKDICEGYLKQCRKRRDMFSDEQLKVIFGNIEDIYRFQMGFVRDLEKQYNNDDP 113 (402)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCTTTCCHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCSSCG
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHhcHHHHHHHHHHHHHHHHHHHccCCC
Confidence 4456788999999999999999999999999999999974 578999999999999999999999999999999865432
Q ss_pred cCCCCCccchhhhHhhHHHHHhhhccccchhhHHHhchHHHHHHHhhccCChHHHHHHHhhCCC-CCCCCCccccccccc
Q psy8107 665 FHHFDQSSQFKNILFSIGSAFLYYVNHFKLYSSFCASHSKAQKVLHPNEGNQALQEFLSSRNPR-QQHSSTLESYLIKPI 743 (1613)
Q Consensus 665 ~~~~~~~~~~~~~i~~IGdvFl~~~~~fk~Y~~Yc~n~~~a~~~L~~~~~~~~f~~fl~~~~~~-~~~~l~L~slLikPV 743 (1613)
....||++|+++.+.|++|..||.||+.+...+.++.+++.|..|+++++.. .+.+++|.+||++||
T Consensus 114 ------------~~~~ig~ifl~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~~~f~~fl~~~~~~~~~~~l~L~s~Li~Pv 181 (402)
T 2dfk_A 114 ------------HLSEIGPCFLEHQDGFWIYSEYCNNHLDACMELSKLMKDSRYQHFFEACRLLQQMIDIAIDGFLLTPV 181 (402)
T ss_dssp ------------GGCCCHHHHHHTTTGGGHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHTTCCSCCHHHHHTHHH
T ss_pred ------------chhhHHHHHHHHHhhhHHHHHHHHhhHHHHHHHHHHHcChHHHHHHHHHHhhhhcccCCHHHHHhHHH
Confidence 1235999999999999999999999999999999987789999999998653 456799999999999
Q ss_pred hhhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhccccccc
Q psy8107 744 QRILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFTTG 788 (1613)
Q Consensus 744 QRI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~T~ 788 (1613)
|||+||+|||++|+|+|+++|+||..+..|+..+..++..+|...
T Consensus 182 QRi~rY~LLL~~Llk~t~~~~~d~~~L~~Al~~i~~v~~~iNe~~ 226 (402)
T 2dfk_A 182 QKICKYPLQLAELLKYTAQDHSDYRYVAAALAVMRNVTQQINERK 226 (402)
T ss_dssp HHHHHHHHHHHHHHHTSCTTSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999888877543
No 10
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=99.95 E-value=1e-27 Score=292.60 Aligned_cols=192 Identities=21% Similarity=0.301 Sum_probs=174.3
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccc
Q psy8107 585 SRQLTDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKETFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEAD 664 (1613)
Q Consensus 585 ~~~~~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~ 664 (1613)
......+.||+++++||++||++||++|+.+.+.|+.||+..++++.++++.||+||++|+++|+.||.+|+++...+..
T Consensus 55 ~~l~~~e~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~l~~~~~l~~~~~~~iF~ni~~I~~~h~~fl~~L~~~~~~~~~ 134 (418)
T 3t06_A 55 AGLTQREIDRQEVINELFVTEASHLRTLRVLDLIFYQRMKKENLMPREELARLFPNLPELIEIHNSWCEAMKKLREEGPI 134 (418)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTSSCHHHHHHHSSSHHHHHHHHHHHHHHHHHHGGGCSS
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 34456688999999999999999999999999999999999999999999999999999999999999999999876653
Q ss_pred cCCCCCccchhhhHhhHHHHHhhhcccc------chhhHHHhchHHHHHHHhhc-cCChHHHHHHHhhCCCCC-CCCCcc
Q psy8107 665 FHHFDQSSQFKNILFSIGSAFLYYVNHF------KLYSSFCASHSKAQKVLHPN-EGNQALQEFLSSRNPRQQ-HSSTLE 736 (1613)
Q Consensus 665 ~~~~~~~~~~~~~i~~IGdvFl~~~~~f------k~Y~~Yc~n~~~a~~~L~~~-~~~~~f~~fl~~~~~~~~-~~l~L~ 736 (1613)
.+ .||++|+++.+.| ++|..||.||+.|.+.++++ ++++.|+.|+++++..+. ++++|.
T Consensus 135 ~~-------------~ig~ifl~~~~~~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~fl~~~~~~~~~~~l~L~ 201 (418)
T 3t06_A 135 IK-------------EISDLMLARFDGPAREELQQVAAQFCSYQSIALELIKTKQRKESRFQLFMQEAESHPQCRRLQLR 201 (418)
T ss_dssp CC-------------CCHHHHHHHHSTHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHTTSGGGTTCCHH
T ss_pred cC-------------cHHHHHHHhcchhhhHHHhhhhHHHhhhHHHHHHHHHHHHhcCHHHHHHHHHHHhCcccccCCHH
Confidence 22 4999999988764 79999999999999999986 679999999999887654 689999
Q ss_pred ccccccchhhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhcccccccc
Q psy8107 737 SYLIKPIQRILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFTTGA 789 (1613)
Q Consensus 737 slLikPVQRI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~T~g 789 (1613)
+||++|||||+||+|||++|+|+|+++|+||..|..|+..+..++..+|....
T Consensus 202 s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~L~~A~~~i~~v~~~iN~~~~ 254 (418)
T 3t06_A 202 DLIISEMQRLTKYPLLLESIIKHTEGGTSEHEKLCRARDQCREILKYVNEAVK 254 (418)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988775443
No 11
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=99.95 E-value=1.3e-27 Score=290.88 Aligned_cols=186 Identities=26% Similarity=0.444 Sum_probs=169.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccccC
Q psy8107 587 QLTDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKETFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEADFH 666 (1613)
Q Consensus 587 ~~~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~~~ 666 (1613)
..++++||+++++||++||++||++|+.+.+.|+.||++ ++++++++.||+||++|+++|+.||.+|+++...|..
T Consensus 19 ~~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~f~~~l~~--~l~~~~~~~iF~ni~~i~~~h~~fl~~L~~~~~~~~~-- 94 (406)
T 2vrw_B 19 KMTEYDKRCCCLREIQQTEEKYTDTLGSIQQHFMKPLQR--FLKPQDMETIFVNIEELFSVHTHFLKELKDALAGPGA-- 94 (406)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTT--TSCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSGGG--
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCc--
Confidence 456789999999999999999999999999999999975 7899999999999999999999999999999886531
Q ss_pred CCCCccchhhhHhhHHHHHhhhccccchhhHHHhchHHHHHHHhhc-cCChHHHHHHHhhCCC-CCCCCCccccccccch
Q psy8107 667 HFDQSSQFKNILFSIGSAFLYYVNHFKLYSSFCASHSKAQKVLHPN-EGNQALQEFLSSRNPR-QQHSSTLESYLIKPIQ 744 (1613)
Q Consensus 667 ~~~~~~~~~~~i~~IGdvFl~~~~~fk~Y~~Yc~n~~~a~~~L~~~-~~~~~f~~fl~~~~~~-~~~~l~L~slLikPVQ 744 (1613)
..||++|+++.+.|++|..||.||+.|.+.++++ ++++.|++|+++++.. .+++++|.+||++|||
T Consensus 95 ------------~~ig~~f~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~~~Li~PvQ 162 (406)
T 2vrw_B 95 ------------TTLYQVFIKYKERFLVYGRYCSQVESASKHLDQVATAREDVQMKLEECSQRANNGRFTLRDLLMVPMQ 162 (406)
T ss_dssp ------------TTHHHHHHHHTTGGGHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSCCHHHHTTHHHH
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHhhccccCCcchHHHhhhHHH
Confidence 3499999999999999999999999999999986 6789999999987644 3578999999999999
Q ss_pred hhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhcccccccc
Q psy8107 745 RILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFTTGA 789 (1613)
Q Consensus 745 RI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~T~g 789 (1613)
||+||+|||++|+|+| ++|+||..|..|+..+..+...+|....
T Consensus 163 Ri~rY~LLL~~llk~t-~~~~d~~~l~~Al~~i~~v~~~iNe~~r 206 (406)
T 2vrw_B 163 RVLKYHLLLQELVKHT-QDATEKENLRLALDAMRDLAQCVNEVKR 206 (406)
T ss_dssp HHTTHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999888875543
No 12
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=99.94 E-value=1.4e-27 Score=295.45 Aligned_cols=191 Identities=26% Similarity=0.453 Sum_probs=171.8
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccc
Q psy8107 586 RQLTDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKK-ETFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEAD 664 (1613)
Q Consensus 586 ~~~~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~-~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~ 664 (1613)
.....+.+|+++++||++||++||++|+.+.+.|++|+.+ .++++.++++.||+||++|+++|+.||.+|++++..+..
T Consensus 111 ~~~~~~~kR~~vi~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~fL~~Le~~~~~~~~ 190 (466)
T 2pz1_A 111 AQSSKDQMRTNVINEILSTERDYIKHLRDICEGYVRQCRKRADMFSEEQLRTIFGNIEDIYRCQKAFVKALEQRFNRERP 190 (466)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCTTTCCHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCSSCG
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcCCCCHHHHHHHHcCHHHHHHHHHHHHHHHHHHHccCCC
Confidence 3456788999999999999999999999999999999964 578999999999999999999999999999999875432
Q ss_pred cCCCCCccchhhhHhhHHHHHhhhccccchhhHHHhchHHHHHHHhhccCChHHHHHHHhhCCC-CCCCCCccccccccc
Q psy8107 665 FHHFDQSSQFKNILFSIGSAFLYYVNHFKLYSSFCASHSKAQKVLHPNEGNQALQEFLSSRNPR-QQHSSTLESYLIKPI 743 (1613)
Q Consensus 665 ~~~~~~~~~~~~~i~~IGdvFl~~~~~fk~Y~~Yc~n~~~a~~~L~~~~~~~~f~~fl~~~~~~-~~~~l~L~slLikPV 743 (1613)
....||++|+++.+.|++|..||.||+.+...++++.++++|..|+++++.. .+.+++|.+||++||
T Consensus 191 ------------~~~~ig~~fl~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~~~f~~f~~~~~~~~~~~~l~L~~~Li~Pv 258 (466)
T 2pz1_A 191 ------------HLSELGACFLEHQADFQIYSEYCNNHPNACVELSRLTKLSKYVYFFEACRLLQKMIDISLDGFLLTPV 258 (466)
T ss_dssp ------------GGCCCHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTCCSCCHHHHHHHHH
T ss_pred ------------ccchHHHHHHHhhHHHHHHHHHHHhhHHHHHHHHHHHhccHHHHHHHHHHHhhhhccCCHHHHhhhHH
Confidence 1235999999999999999999999999999999987788999999988643 456799999999999
Q ss_pred hhhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhccccccc
Q psy8107 744 QRILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFTTG 788 (1613)
Q Consensus 744 QRI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~T~ 788 (1613)
|||+||+|||++|+|+|+++|+||..|..|+..+..++..+|...
T Consensus 259 QRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~v~~~iNe~~ 303 (466)
T 2pz1_A 259 QKICKYPLQLAELLKYTHPQHRDFKDVEAALHAMKNVAQLINERK 303 (466)
T ss_dssp HHHHHHHHHHHHHHHTSCTTSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988877543
No 13
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=99.94 E-value=1.9e-27 Score=286.28 Aligned_cols=193 Identities=22% Similarity=0.321 Sum_probs=170.7
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccc
Q psy8107 585 SRQLTDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKETFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEAD 664 (1613)
Q Consensus 585 ~~~~~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~ 664 (1613)
....+.+.||+++++||++||++||++|+.+.+.|+.|+...++++.++++.||+||++|+++|+.||.+|+++...++.
T Consensus 19 ~~l~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~l~~~~~l~~~~~~~iF~ni~~I~~~h~~fl~~L~~~~~~~~~ 98 (377)
T 3p6a_A 19 HSLPKSQVKRQEVISELLVTEAAHVRMLRVLHDLFFQPMAECLFFPLEELQNIFPSLDELIEVHSLFLDRLMKRRQESGY 98 (377)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTSSCHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHccHHHHHHHHHHHHHHHHHHHhccCC
Confidence 34556788999999999999999999999999999999999899999999999999999999999999999998876542
Q ss_pred cCCCCCccchhhhHhhHHHHHhhhccc-----c-chhhHHHhchHHHHHHHhhc-cCChHHHHHHHhhCCC-CCCCCCcc
Q psy8107 665 FHHFDQSSQFKNILFSIGSAFLYYVNH-----F-KLYSSFCASHSKAQKVLHPN-EGNQALQEFLSSRNPR-QQHSSTLE 736 (1613)
Q Consensus 665 ~~~~~~~~~~~~~i~~IGdvFl~~~~~-----f-k~Y~~Yc~n~~~a~~~L~~~-~~~~~f~~fl~~~~~~-~~~~l~L~ 736 (1613)
. ...||++|+++.+. | ++|..||.||+.+.+.++++ ++++.|+.|+++++.. .+++++|.
T Consensus 99 ~------------~~~ig~~fl~~~~~~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~ 166 (377)
T 3p6a_A 99 L------------IEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKDPRFCAFVQEAESRPRCRRLQLK 166 (377)
T ss_dssp C------------CCCCHHHHHHHHSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHHTSGGGTTCCHH
T ss_pred C------------CCcHHHHHHHHhcchhhHHHHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHhCcccCCCCHH
Confidence 1 22599999999885 4 69999999999999999984 7899999999988755 45679999
Q ss_pred ccccccchhhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhcccccccch
Q psy8107 737 SYLIKPIQRILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFTTGAG 790 (1613)
Q Consensus 737 slLikPVQRI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~T~gG 790 (1613)
+||++|||||+||+|||++|+|+|++ |+||..+..|+..+..++..+|....-
T Consensus 167 ~~Li~PvQRi~rY~LLL~~llk~t~~-~~d~~~l~~A~~~i~~v~~~in~~~~~ 219 (377)
T 3p6a_A 167 DMIPTEMQRLTKYPLLLQSIGQNTEE-PTEREKVELAAECCREILHHVNQAVRD 219 (377)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHTCCS-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHhhCCC-cccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987 899999999999999999888755443
No 14
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=99.94 E-value=2.5e-27 Score=297.40 Aligned_cols=192 Identities=22% Similarity=0.319 Sum_probs=170.5
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccc
Q psy8107 585 SRQLTDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKETFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEAD 664 (1613)
Q Consensus 585 ~~~~~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~ 664 (1613)
......+.||++||+||++||++||++|+.+.+.|+.||...++++.++++.||+||++|+++|+.||.+|+++...++.
T Consensus 172 ~~l~~~e~kRq~vi~ELi~TE~~YV~~L~~l~~~y~~pl~~~~~l~~~~~~~IF~nie~I~~~h~~fL~~L~~~~~~~~~ 251 (536)
T 3odw_A 172 HSLPKSQVKRQEVISELLVTEAAHVRMLRVLHDLFFQPMAECLFFPLEELQNIFPSLDELIEVHSLFLDRLMKRRQESGY 251 (536)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTSSCHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 34456788999999999999999999999999999999999999999999999999999999999999999998876532
Q ss_pred cCCCCCccchhhhHhhHHHHHhhhccc-----c-chhhHHHhchHHHHHHHhh-ccCChHHHHHHHhhCCCC-CCCCCcc
Q psy8107 665 FHHFDQSSQFKNILFSIGSAFLYYVNH-----F-KLYSSFCASHSKAQKVLHP-NEGNQALQEFLSSRNPRQ-QHSSTLE 736 (1613)
Q Consensus 665 ~~~~~~~~~~~~~i~~IGdvFl~~~~~-----f-k~Y~~Yc~n~~~a~~~L~~-~~~~~~f~~fl~~~~~~~-~~~l~L~ 736 (1613)
. ...||++|+++.+. | ++|..||.||+.+.+.+++ +++++.|+.|+++++..+ +++++|.
T Consensus 252 ~------------~~~Igdifl~~~~~~~~~~f~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~fl~~~~~~~~~~~l~L~ 319 (536)
T 3odw_A 252 L------------IEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKDPRFCAFVQEAESRPRCRRLQLK 319 (536)
T ss_dssp -------------CCCCHHHHHHHHSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHTTSGGGTTCCHH
T ss_pred c------------cccHHHHHHHHcchhhhHHHHHHHHHHHhhHHHHHHHHHHHHhhCHHHHHHHHHHhhCcccccCCHH
Confidence 1 23599999999874 4 7999999999999999998 488999999999988765 5689999
Q ss_pred ccccccchhhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhcccccccc
Q psy8107 737 SYLIKPIQRILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFTTGA 789 (1613)
Q Consensus 737 slLikPVQRI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~T~g 789 (1613)
+||++|||||+||+|||++|+|+|+. |+||..|..|+..+..++..+|....
T Consensus 320 s~Li~PvQRi~rY~LLL~~LlK~T~~-~~d~~~L~~Al~~i~~v~~~iNe~~r 371 (536)
T 3odw_A 320 DMIPTEMQRLTKYPLLLQSIGQNTEE-PTEREKVELAAECCREILHHVNQAVR 371 (536)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHTTCCS-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC-chhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987 89999999999999999988875544
No 15
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=99.94 E-value=1.9e-27 Score=291.60 Aligned_cols=190 Identities=18% Similarity=0.218 Sum_probs=167.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc---------CCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q psy8107 589 TDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKK---------ETFLSGAEINALFGNILEIVAFQRQFLQNLVEAL 659 (1613)
Q Consensus 589 ~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~---------~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~ 659 (1613)
..++||+.|++||++||++||++|+.+.+.|+.||.+ .+.++.++++.||+||++|+++|+.||.+|++++
T Consensus 18 e~~~kr~~ii~ELl~TE~~Yv~~L~~l~~~f~~pl~~~l~~~~~~~~~~l~~~~~~~iF~ni~~I~~~h~~fL~~L~~~~ 97 (434)
T 3mpx_A 18 GGQSRALVIAQELLSSEKAYVEMLQHLNLDFHGAVMRALDDMDHEGRDTLAREELRQGLSELPAIHDLHQGILEELEERL 97 (434)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 3457899999999999999999999999999999964 3578889999999999999999999999999999
Q ss_pred hcccccCCCCCccchhhhHhhHHHHHhhhccccchhhHHHhchHHHHHHHhh-ccCChHHHHHHHhhCCCC-CCCCCccc
Q psy8107 660 ENEADFHHFDQSSQFKNILFSIGSAFLYYVNHFKLYSSFCASHSKAQKVLHP-NEGNQALQEFLSSRNPRQ-QHSSTLES 737 (1613)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~i~~IGdvFl~~~~~fk~Y~~Yc~n~~~a~~~L~~-~~~~~~f~~fl~~~~~~~-~~~l~L~s 737 (1613)
..|...+ .||++|+++.+.|++|..||.||+.+.+.+++ +++++.|++|+++++..+ +++++|.+
T Consensus 98 ~~~~~~~-------------~ig~ifl~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s 164 (434)
T 3mpx_A 98 SNWESQQ-------------KVADVFLAREQGFDHHATHILQFDRYLGLLSENCLHSPRLAAAVREFEQSVQGGSQTAKH 164 (434)
T ss_dssp HTTTTCC-------------CCTHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTC------CHHH
T ss_pred HhccCcc-------------cHHHHHHHhhHHHHHHHHHHHhHHHHHHHHHHHHHhChHHHHHHHHHHcCcccCCCCHHH
Confidence 8875433 49999999999999999999999999999998 588999999999986554 57799999
Q ss_pred cccccchhhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhcccccccchh
Q psy8107 738 YLIKPIQRILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFTTGAGE 791 (1613)
Q Consensus 738 lLikPVQRI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~T~gG~ 791 (1613)
||++|||||+||+|||++|+|+|+++|+|+..+..|+..+..+...+|....-.
T Consensus 165 ~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~v~~~iN~~~~~~ 218 (434)
T 3mpx_A 165 RLLRVVQRLFQYQVLLTDYLNNLCPDSAEYDNTQGALSLISKVTDRANDSMEQG 218 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCTTSHHHHHHHHHHHHHHHHHHHHHHHCTTH
T ss_pred HHhhhHHhhhHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998887655433
No 16
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=99.94 E-value=3.4e-27 Score=285.13 Aligned_cols=191 Identities=20% Similarity=0.329 Sum_probs=168.6
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccccC
Q psy8107 587 QLTDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKETFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEADFH 666 (1613)
Q Consensus 587 ~~~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~~~ 666 (1613)
....+.||+++++||++||++||++|+.+.+.|+.||+..++++.++++.||+||++|+++| .||.+|++++..+...
T Consensus 18 l~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~f~~~l~~~~~l~~~~~~~iF~ni~~I~~~h-~fL~~l~~~~~~~~~~- 95 (385)
T 1txd_A 18 LKPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQLH-IGLNEQMKAVRKRNET- 95 (385)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCSCHHHHHHHHTTHHHHHHHH-HHHHHHHHHHHTTCTT-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHhcCHHHHHHHH-HHHHHHHHHHHHhhcC-
Confidence 34557899999999999999999999999999999999888999999999999999999999 9999999987654321
Q ss_pred CCCCccchhhhHhhHHHHHhhhcc-----cc-chhhHHHhchHHHHHHHhhc-cCChHHHHHHHhhCCC-CCCCCCcccc
Q psy8107 667 HFDQSSQFKNILFSIGSAFLYYVN-----HF-KLYSSFCASHSKAQKVLHPN-EGNQALQEFLSSRNPR-QQHSSTLESY 738 (1613)
Q Consensus 667 ~~~~~~~~~~~i~~IGdvFl~~~~-----~f-k~Y~~Yc~n~~~a~~~L~~~-~~~~~f~~fl~~~~~~-~~~~l~L~sl 738 (1613)
.....||++|+++.+ .| ++|..||.||+.|.+.++++ ++++.|++|+++++.. .+++++|.+|
T Consensus 96 ---------~~~~~ig~~fl~~~~~~~~~~f~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~fl~~~~~~~~~~~l~L~~~ 166 (385)
T 1txd_A 96 ---------SVIDQIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKSRQKKDSRFQTFVQDAESNPLCRRLQLKDI 166 (385)
T ss_dssp ---------CCCCCCHHHHHHHHSTHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHHHSGGGTTCCHHHH
T ss_pred ---------CCcccHHHHHHHHccchhHHHHHHHHHHHHHchHHHHHHHHHHHhcCHHHHHHHHHHHhCccccCCChHHH
Confidence 112359999999975 45 79999999999999999985 7899999999998754 4578999999
Q ss_pred ccccchhhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhcccccccc
Q psy8107 739 LIKPIQRILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFTTGA 789 (1613)
Q Consensus 739 LikPVQRI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~T~g 789 (1613)
|++|||||+||+|||++|+|+|+++ +||..+..|+..+..++..+|...+
T Consensus 167 Li~PvQRi~rY~LLL~~llk~t~~~-~d~~~l~~Al~~i~~v~~~iN~~~~ 216 (385)
T 1txd_A 167 IPTQMQRLTKYPLLLDNIAKYTEWP-TEREKVKKAADHCRQILNFVNQAVK 216 (385)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTCCSH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHhHhhhHHHHHHHHHhhCCCC-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987 7999999999999988888776544
No 17
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=99.94 E-value=5e-27 Score=280.60 Aligned_cols=177 Identities=29% Similarity=0.520 Sum_probs=155.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC---CCCH---HHHHHHhccHHHHHHHHH-HHHHHHHHHHhc
Q psy8107 589 TDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKET---FLSG---AEINALFGNILEIVAFQR-QFLQNLVEALEN 661 (1613)
Q Consensus 589 ~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~~---iL~~---~e~~~LF~NIeeIl~~h~-~FL~~Le~~~~~ 661 (1613)
..+.||+++++||++||++||++|+.+.+.|+.||+... .++. ++++.||+||++|+++|. .||.+|+++...
T Consensus 7 ~~~~kR~~vi~ELl~TE~~Yv~~L~~l~~~y~~pl~~~~~~~~~p~~~~~~~~~iF~ni~~I~~~h~~~fl~~Le~~~~~ 86 (353)
T 1kz7_A 7 SLAILRRHVMNELLDTERAYVEELLCVLEGYAAEMDNPLMAHLISTGLQNKKNILFGNMEEIYHFHNRIFLRELESCIDC 86 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGCTTTTTTSCHHHHHTHHHHHTTHHHHHHHHHHTHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChhhhhhHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 457799999999999999999999999999999998765 6775 579999999999999997 799999998764
Q ss_pred ccccCCCCCccchhhhHhhHHHHHhhhccccchhhHHHhchHHHHHHHhhccCChHHHHHHHhhCCCCCCCCCccccccc
Q psy8107 662 EADFHHFDQSSQFKNILFSIGSAFLYYVNHFKLYSSFCASHSKAQKVLHPNEGNQALQEFLSSRNPRQQHSSTLESYLIK 741 (1613)
Q Consensus 662 ~~~~~~~~~~~~~~~~i~~IGdvFl~~~~~fk~Y~~Yc~n~~~a~~~L~~~~~~~~f~~fl~~~~~~~~~~l~L~slLik 741 (1613)
+ ..||++|+++.+.|++|..||.||+.|.+.+++++++ .|+++++...+++++|.+||++
T Consensus 87 ~----------------~~ig~~fl~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~----~f~~~~~~~~~~~l~L~~~Li~ 146 (353)
T 1kz7_A 87 P----------------ELVGRCFLERMEEFQIYEKYCQNKPRSESLWRQCSDC----PFFQECQKKLDHKLSLDSYLLK 146 (353)
T ss_dssp G----------------GGHHHHHHTTTTGGGHHHHHHHHHHHHHHHHHHHTTC----HHHHHHHHHHTCSSCHHHHHTH
T ss_pred H----------------HHHHHHHHHhhHHHHHHHHHHhChHHHHHHHHHhhcc----hHHHHHHHhcCCCCCHHHHHHH
Confidence 3 2499999999999999999999999999999888665 4555555455678999999999
Q ss_pred cchhhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhccccc
Q psy8107 742 PIQRILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFT 786 (1613)
Q Consensus 742 PVQRI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~ 786 (1613)
|||||+||+|||++|+|+|+ +|+|+..+..|+..+..++..+|.
T Consensus 147 PvQRi~rY~LLL~~llk~t~-~~~d~~~L~~Al~~i~~v~~~iN~ 190 (353)
T 1kz7_A 147 PVQRITKYQLLLKEMLKYSK-HCEGAEDLQEALSSILGILKAVND 190 (353)
T ss_dssp HHHHHHHHHHHHHHHHHTCT-TSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccC-CCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998 479999999999888888776553
No 18
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=99.93 E-value=6.1e-27 Score=279.95 Aligned_cols=177 Identities=26% Similarity=0.443 Sum_probs=153.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC--HHHHHHHhccHHHHHHHHHH-HHHHHHHHHhcccc
Q psy8107 588 LTDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKETFLS--GAEINALFGNILEIVAFQRQ-FLQNLVEALENEAD 664 (1613)
Q Consensus 588 ~~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~~iL~--~~e~~~LF~NIeeIl~~h~~-FL~~Le~~~~~~~~ 664 (1613)
.+...||+++++||++||++||++|+.+.+.|+.||....+.+ .++.+.||+||++|+++|+. ||++|+++..++.
T Consensus 7 ~k~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~l~~~~~p~~l~~~~~~iF~ni~~I~~~h~~~fl~~L~~~~~~~~- 85 (354)
T 2rgn_B 7 KKALERSMYVLSELVETEKMYVDDLGQIVEGYMATMAAQGVPESLRGRDRIVFGNIQQIYEWHRDYFLQELQRCLKDPD- 85 (354)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCCCSSSGGGHHHHHTTHHHHHHHHHHTHHHHHHHHHSCGG-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhHHHHhhCHHHHHHHHHHHHHHHHHHHHcCHH-
Confidence 3467899999999999999999999999999999998754322 25679999999999999999 9999999986532
Q ss_pred cCCCCCccchhhhHhhHHHHHhhhccccchhhHHHhchHHHHHHHhhccCChHHHHHHHhhCCCCCCCCCccccccccch
Q psy8107 665 FHHFDQSSQFKNILFSIGSAFLYYVNHFKLYSSFCASHSKAQKVLHPNEGNQALQEFLSSRNPRQQHSSTLESYLIKPIQ 744 (1613)
Q Consensus 665 ~~~~~~~~~~~~~i~~IGdvFl~~~~~fk~Y~~Yc~n~~~a~~~L~~~~~~~~f~~fl~~~~~~~~~~l~L~slLikPVQ 744 (1613)
.||++|+++.+.|++|..||.||+.+...++++.+ ..|+++. ...+++++|.+||++|||
T Consensus 86 ---------------~ig~~fl~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~-~~f~~~~----~~~~~~l~L~s~Li~PvQ 145 (354)
T 2rgn_B 86 ---------------WLAQLFIKHERRLHMYVVYCQNKPKSEHVVSEFGD-SYFEELR----QQLGHRLQLNDLLIKPVQ 145 (354)
T ss_dssp ---------------GHHHHHHHTTTTTHHHHHHHHTSHHHHHHHTTTSH-HHHHHHH----HHHCCSSCHHHHTTHHHH
T ss_pred ---------------HHHHHHHHhHHHHHHHHHHHhCcHHHHHHHHHHHH-HHHHHHH----HhcCCCCCHHHHhhhHHH
Confidence 49999999999999999999999999999988642 3344443 344678999999999999
Q ss_pred hhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhcccc
Q psy8107 745 RILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIF 785 (1613)
Q Consensus 745 RI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~ 785 (1613)
||+||+|||++|+|+|+++|+||..+..|+..+..+...+|
T Consensus 146 Ri~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~v~~~in 186 (354)
T 2rgn_B 146 RIMKYQLLLKDFLKYYNRAGMDTADLEQAVEVMCFVPKRCN 186 (354)
T ss_dssp HHTSHHHHHHHHHHHTSSSCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888776544
No 19
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=99.93 E-value=4.2e-26 Score=267.90 Aligned_cols=173 Identities=24% Similarity=0.464 Sum_probs=142.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCH---HHHHHHhccHHHHHHHHHH-HHHHHHHHHhcc
Q psy8107 588 LTDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKE-TFLSG---AEINALFGNILEIVAFQRQ-FLQNLVEALENE 662 (1613)
Q Consensus 588 ~~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~-~iL~~---~e~~~LF~NIeeIl~~h~~-FL~~Le~~~~~~ 662 (1613)
.+.+.||++|++||++||++||++|+.+.+.|+.||+.. +.++. ++++.||+|+++|+++|++ ||++|+++...+
T Consensus 4 ~k~~~kR~~vi~El~~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~~~~iF~ni~~i~~~h~~~fl~~L~~~~~~~ 83 (311)
T 1nty_A 4 RKSARRKEFIMAELIQTEKAYVRDLRECMDTYLWEMTSGVEEIPPGIVNKELIIFGNMQEIYEFHNNIFLKELEKYEQLP 83 (311)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCCTTTTTCHHHHHTTHHHHHHHHHHTHHHHHHHTTTCG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCChhhhhhHHHhhcCHHHHHHHHHHHHHHHHHHHHCCH
Confidence 345689999999999999999999999999999999763 34553 5789999999999999996 999999876432
Q ss_pred cccCCCCCccchhhhHhhHHHHHhhhccccchhhHHHhchHHHHHHHhhccCChHHHHHHHhhCCCCCCCCCcccccccc
Q psy8107 663 ADFHHFDQSSQFKNILFSIGSAFLYYVNHFKLYSSFCASHSKAQKVLHPNEGNQALQEFLSSRNPRQQHSSTLESYLIKP 742 (1613)
Q Consensus 663 ~~~~~~~~~~~~~~~i~~IGdvFl~~~~~fk~Y~~Yc~n~~~a~~~L~~~~~~~~f~~fl~~~~~~~~~~l~L~slLikP 742 (1613)
..||++|+++.+.|++|..||.||+.|...+.+.. ..|+++++...+++++|.+||++|
T Consensus 84 ----------------~~ig~~f~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~-----~~f~~~~~~~~~~~l~L~~~Li~P 142 (311)
T 1nty_A 84 ----------------EDVGHCFVTWADKFQMYVTYCKNKPDSTQLILEHA-----GSYFDEIQQRHGLANSISSYLIKP 142 (311)
T ss_dssp ----------------GGTHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHT-----TTHHHHHHHHHTCSSCHHHHHTHH
T ss_pred ----------------HHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHH-----HHHHHHHHHhccCCCCHHHHhhhh
Confidence 24999999999999999999999999999996542 245555544445679999999999
Q ss_pred chhhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhccc
Q psy8107 743 IQRILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLI 784 (1613)
Q Consensus 743 VQRI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI 784 (1613)
||||+||+|||++|+|+|+++|++ +..|+..+..+...+
T Consensus 143 vQRi~rY~LLL~~llk~t~~~h~~---l~~Al~~~~~v~~~~ 181 (311)
T 1nty_A 143 VQRITKYQLLLKELLTCCEEGKGE---IKDGLEVMLSVPKRA 181 (311)
T ss_dssp HHHHHHHHHHHHHHHHTSCTTCTT---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCcHH---HHHHHHHHHHHHHHH
Confidence 999999999999999999988765 666666666555433
No 20
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=99.92 E-value=4.4e-26 Score=289.64 Aligned_cols=186 Identities=27% Similarity=0.433 Sum_probs=169.3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccccC
Q psy8107 587 QLTDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKETFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEADFH 666 (1613)
Q Consensus 587 ~~~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~~~ 666 (1613)
..++++||+++++||++||++||++|+.+.+.|++||++ +++.++++.||+||++|+++|+.||.+|+++...+..
T Consensus 191 ~~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~L~~--~l~~~~~~~iF~ni~~I~~~h~~fL~~L~~~~~~~~~-- 266 (587)
T 3ky9_A 191 KMTEYDKRCCCLREIQQTEEKYTDTLGSIQQHFLKPLQR--FLKPQDIEIIFINIEDLLRVHTHFLKEMKEALGTPGA-- 266 (587)
T ss_dssp -CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHT--TSCTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHSSTT--
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHHhcHHHHHHHHHHHHHHHHHHHhccCc--
Confidence 456789999999999999999999999999999999985 7899999999999999999999999999999987631
Q ss_pred CCCCccchhhhHhhHHHHHhhhccccchhhHHHhchHHHHHHHhhc-cCChHHHHHHHhhCCCC-CCCCCccccccccch
Q psy8107 667 HFDQSSQFKNILFSIGSAFLYYVNHFKLYSSFCASHSKAQKVLHPN-EGNQALQEFLSSRNPRQ-QHSSTLESYLIKPIQ 744 (1613)
Q Consensus 667 ~~~~~~~~~~~i~~IGdvFl~~~~~fk~Y~~Yc~n~~~a~~~L~~~-~~~~~f~~fl~~~~~~~-~~~l~L~slLikPVQ 744 (1613)
..||++|+++.+.|++|..||.||+.+...++++ ++++.|+.|+++++..+ +++++|.+||++|||
T Consensus 267 ------------~~ig~if~~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQ 334 (587)
T 3ky9_A 267 ------------ANLYQVFIKYKERFLVYGRYCSQVESASKHLDRVAAAREDVQMKLEECSQRANNGRFTLRDLLMVPMQ 334 (587)
T ss_dssp ------------CSHHHHHHHTTTGGGHHHHHHHHHHHHHHHHHHHHHTCHHHHTTTTHHHHHHHSSSCCHHHHHHHHHH
T ss_pred ------------cHHHHHHHHHHHhcchHHHHHhChHHHHHHHHHHHhcCHHHHHHHHHHHhccccCCCCHHHHHhHHHH
Confidence 2499999999999999999999999999999986 78899999998876554 578999999999999
Q ss_pred hhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhcccccccc
Q psy8107 745 RILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFTTGA 789 (1613)
Q Consensus 745 RI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~T~g 789 (1613)
||+||+|||++|+|+|+ +|+||..|..|+..+..+...+|....
T Consensus 335 Ri~rY~LLL~~Llk~T~-~~~d~~~L~~Al~~i~~v~~~iNe~~r 378 (587)
T 3ky9_A 335 RVLKYHLLLQELVKHTQ-EAMEKENLRLALDAMRDLAQCVNEVKR 378 (587)
T ss_dssp HHTTHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 799999999999999999988775443
No 21
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=99.92 E-value=3.3e-26 Score=273.38 Aligned_cols=181 Identities=17% Similarity=0.283 Sum_probs=156.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccccCCCCCcc
Q psy8107 594 LSKVIIELIETERTYVKNLNGLLENYLEPLKKE-TFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEADFHHFDQSS 672 (1613)
Q Consensus 594 R~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~-~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~~~~~~~~~ 672 (1613)
+++|++||++||++||++|+.+.+.|+.||.+. ++++.++++.||+||++|+++|+.||.+|+++...+.+...
T Consensus 4 y~~vi~Eli~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~fl~~L~~~~~~~~~~~~----- 78 (354)
T 1dbh_A 4 YYDLVKAFMAEIRQYIRELNLIIKVFREPFVSNSKLFSANDVENIFSRIVDIHELSVKLLGHIEDTVEMTDEGSP----- 78 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHCTTTCCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCCTTSS-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhccccCCc-----
Confidence 458999999999999999999999999999865 47999999999999999999999999999999876543111
Q ss_pred chhhhHhhHHHHHhhhcc--ccchhhHHHhch--HHHHHHHhhccCChHHHHHHHhhCC--CCCCCCCccccccccchhh
Q psy8107 673 QFKNILFSIGSAFLYYVN--HFKLYSSFCASH--SKAQKVLHPNEGNQALQEFLSSRNP--RQQHSSTLESYLIKPIQRI 746 (1613)
Q Consensus 673 ~~~~~i~~IGdvFl~~~~--~fk~Y~~Yc~n~--~~a~~~L~~~~~~~~f~~fl~~~~~--~~~~~l~L~slLikPVQRI 746 (1613)
...||++|+++.+ .|++|..||.|| +.+.+.++++.+++.|..|++++.. +.+.+++|.+||++|||||
T Consensus 79 -----~~~ig~~f~~~~~~~~f~~Y~~Y~~n~~~~~a~~~l~~~~~~~~f~~~l~~~~~~~~~~~~~~L~~~Li~PvQRi 153 (354)
T 1dbh_A 79 -----HPLVGSCFEDLAEELAFDPYESYARDILRPGFHDRFLSQLSKPGAALYLQSIGEGFKEAVQYVLPRLLLAPVYHC 153 (354)
T ss_dssp -----SCCCHHHHHHHHHTTTTHHHHHHHHHHTSTTHHHHHHHHHHSTTHHHHHHHHCTTHHHHHHHTHHHHTTHHHHHH
T ss_pred -----cchHHHHHHHHhHHhhhhHHHHHHHhccchHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 1359999999998 799999999999 5566889888889999999987432 2345689999999999999
Q ss_pred hchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhcccc
Q psy8107 747 LKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIF 785 (1613)
Q Consensus 747 ~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~ 785 (1613)
+||+|||++|+|+|| +|+||..|..|+..+..+...++
T Consensus 154 ~rY~LLL~~llk~t~-~~~d~~~L~~Al~~~~~v~~~in 191 (354)
T 1dbh_A 154 LHYFELLKQLEEKSE-DQEDKECLKQAITALLNVQSGME 191 (354)
T ss_dssp HHHHHHHHHHHHHCS-CHHHHHHHHHHHHHTHHHHHHHH
T ss_pred chHHHHHHHHHhcCC-CCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997 59999999988888777766544
No 22
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.92 E-value=4.2e-27 Score=293.82 Aligned_cols=193 Identities=23% Similarity=0.351 Sum_probs=0.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccccC
Q psy8107 587 QLTDAEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKETFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEADFH 666 (1613)
Q Consensus 587 ~~~~~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~~~ 666 (1613)
....+.||+++++||++||++||++|+.+.+.|+.||...++++.++++.||+||++|+++|+.||.+|+++...+.+.
T Consensus 21 l~~~e~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~l~~~~~l~~~~~~~iF~ni~~i~~~h~~fl~~L~~~~~~~~~~- 99 (510)
T 3jzy_A 21 MQPIERKRQGYIHELIQTEERYMADLQLVVEVFQKRMAESGFLTEGEMALIFVNWKELIMSNTKLLKALRVRKKTGGEK- 99 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHccCHHHHHHHHHHHHHHHHHHHhccCCC-
Confidence 3455789999999999999999999999999999999998999999999999999999999999999999998765421
Q ss_pred CCCCccchhhhHhhHHHHHhhhccccchhhHHHhchHHHHHHHhhc-cCChHHHHHHHhhCCCCC-CCCCccccccccch
Q psy8107 667 HFDQSSQFKNILFSIGSAFLYYVNHFKLYSSFCASHSKAQKVLHPN-EGNQALQEFLSSRNPRQQ-HSSTLESYLIKPIQ 744 (1613)
Q Consensus 667 ~~~~~~~~~~~i~~IGdvFl~~~~~fk~Y~~Yc~n~~~a~~~L~~~-~~~~~f~~fl~~~~~~~~-~~l~L~slLikPVQ 744 (1613)
.....||++|+++.+.|++|..||.||+.+.+.+.++ ++++.|++|+++++..+. .+++|.+||++|||
T Consensus 100 ---------~~~~~ig~~f~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~f~~~~~~~~~~~~~~~l~L~~~L~~PvQ 170 (510)
T 3jzy_A 100 ---------MPVQMIGDILAAELSHMQAYIRFCSCQLNGAALLQQKTDEDTDFKEFLKKLASDPRCKGMPLSSFLLKPMQ 170 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------CchhhHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHhCccccCCCHHHHhChhhh
Confidence 1234699999999999999999999999999999885 678999999999887654 55999999999999
Q ss_pred hhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhcccccccc
Q psy8107 745 RILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFTTGA 789 (1613)
Q Consensus 745 RI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~T~g 789 (1613)
||+||+|||++|+|+|+++|+||..+..|+..+..++..+|....
T Consensus 171 Ri~rY~LLL~~llk~t~~~~~d~~~l~~A~~~i~~v~~~in~~~~ 215 (510)
T 3jzy_A 171 RITRYPLLIRSILENTPESHADHSSLKLALERAEELCSQVNEGVR 215 (510)
T ss_dssp ---------------------------------------------
T ss_pred hhcCcHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988876544
No 23
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=99.88 E-value=9.4e-24 Score=282.96 Aligned_cols=185 Identities=16% Similarity=0.269 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccccCCCC
Q psy8107 591 AEKLSKVIIELIETERTYVKNLNGLLENYLEPLKKE-TFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEADFHHFD 669 (1613)
Q Consensus 591 ~~KR~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~-~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~~~~~~ 669 (1613)
..+++++|+||++||++||++|+.+.+.|+.||.+. ++++.++++.||+||++|+++|+.||.+|+++...+.+..
T Consensus 198 ~~~~revI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~~l~~~~~~~IF~Ni~~I~~~h~~fL~~Le~~~~~~~~~~--- 274 (1049)
T 3ksy_A 198 EQTYYDLVKAFMAEIRQYIRELNLIIKVFREPFVSNSKLFSANDVENIFSRIVDIHELSVKLLGHIEDTVEMTDEGS--- 274 (1049)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHCTTTSCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHCCSSS---
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhccccCC---
Confidence 456779999999999999999999999999999876 5889999999999999999999999999999998664311
Q ss_pred CccchhhhHhhHHHHHhhhcc--ccchhhHHHhch--HHHHHHHhhccCChHHHHHHHh-hCCC-CCCCCCccccccccc
Q psy8107 670 QSSQFKNILFSIGSAFLYYVN--HFKLYSSFCASH--SKAQKVLHPNEGNQALQEFLSS-RNPR-QQHSSTLESYLIKPI 743 (1613)
Q Consensus 670 ~~~~~~~~i~~IGdvFl~~~~--~fk~Y~~Yc~n~--~~a~~~L~~~~~~~~f~~fl~~-~~~~-~~~~l~L~slLikPV 743 (1613)
....||++|+++++ .|++|..||.|| +.|...++++.++++|..|+++ ++.. .+++++|.+||++||
T Consensus 275 -------~~~~IgdiFl~~~~~~~F~~Y~~Yc~ny~~~~a~~~l~~l~~~~~f~~fl~~~~~~~~~~~~l~L~s~LikPv 347 (1049)
T 3ksy_A 275 -------PHPLVGSCFEDLAEELAFDPYESYARDILRPGFHDRFLSQLSKPGAALYLQSIGEGFKEAVQYVLPRLLLAPV 347 (1049)
T ss_dssp -------SSCCCHHHHHHHHHTTTTSHHHHHHHHHHCTTHHHHHHTTSSSTTHHHHHHHHCTTHHHHHHHTHHHHTTHHH
T ss_pred -------chhhHHHHHHHHHHHhhhhHHHHHHHhhccHHHHHHHHHHhcChHHHHHHHHHHhhhhhhhcCChHHHHHHHH
Confidence 11359999999976 788999999995 8999999998889999999998 4432 345789999999999
Q ss_pred hhhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhccccc
Q psy8107 744 QRILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLIFT 786 (1613)
Q Consensus 744 QRI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI~~ 786 (1613)
|||+||+|||++|+|+|+ +|+||..+..|+..+..+...+|.
T Consensus 348 QRI~rY~LLL~~LlK~Tp-~~~D~~~L~~Al~~i~~v~~~VNe 389 (1049)
T 3ksy_A 348 YHCLHYFELLKQLEEKSE-DQEDKECLKQAITALLNVQSGMEK 389 (1049)
T ss_dssp HHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHhcCC-CcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 559999999999999988888774
No 24
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.81 E-value=5.8e-20 Score=187.53 Aligned_cols=106 Identities=22% Similarity=0.389 Sum_probs=88.5
Q ss_pred cccceEEeccc--ccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCC------CCCCceeEeCceEEeeCC-CCCCCC
Q psy8107 3 SVKKWLLRKKH--QIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVD------AAPKHLIIVDGAIMQPIP-EHPKRD 73 (1613)
Q Consensus 3 ~~Kg~L~~K~~--k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~------~~p~~~I~l~~~~~~~a~-dy~KK~ 73 (1613)
...|+|.||+. ....+++|+|+++|+||+|+.|+||||+........ ..|...|+|++|.++.++ ||+||+
T Consensus 9 ~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~~d~~krk 88 (124)
T 3pp2_A 9 DKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDKSSRK 88 (124)
T ss_dssp CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECCGGGCSSS
T ss_pred EEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEecccccCCCc
Confidence 46788888843 111146789999999999999999999876532211 357889999999999997 999999
Q ss_pred ceEEEEcCCCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 74 YIFCLSTAFGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 74 nVF~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
|||+|+|++|++|||||+|++||++||++|+.|+.
T Consensus 89 ~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 89 NVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp SEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred eEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999874
No 25
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.75 E-value=1.3e-18 Score=176.61 Aligned_cols=106 Identities=18% Similarity=0.308 Sum_probs=89.8
Q ss_pred cccceEEecccc---cccccCCCceEEEEEEeCCeEEEecCCCcCCC--CCCCCCCceeEeCceEEeeCCCCCCCCceEE
Q psy8107 3 SVKKWLLRKKHQ---IELARKRGWKGYWVCLKGTTLLFYPCDSREGR--SVDAAPKHLIIVDGAIMQPIPEHPKRDYIFC 77 (1613)
Q Consensus 3 ~~Kg~L~~K~~k---~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~--~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~ 77 (1613)
...|||.||..- ...+.+|+||++|+||+|+.|++|||+..... .....++..|+|.+|.++.+.||+||+|||+
T Consensus 9 ~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~kr~~~F~ 88 (122)
T 1dro_A 9 GHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKKHVLR 88 (122)
T ss_dssp SEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSSSSSTTEEE
T ss_pred EEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEEEeCCCCCCCCeEEE
Confidence 468999998651 11236799999999999999999999876432 1222445789999999999999999999999
Q ss_pred EEcCCCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 78 LSTAFGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 78 L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
|+|+++++|+|||+|++||++||++|+.|+.
T Consensus 89 l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~ 119 (122)
T 1dro_A 89 VKLANGALFLLQAHDDTEMSQWVTSLKAQSD 119 (122)
T ss_dssp EECSSSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred EEEcCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999976
No 26
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.73 E-value=1e-17 Score=172.11 Aligned_cols=107 Identities=21% Similarity=0.367 Sum_probs=85.6
Q ss_pred cccceEEeccc-ccccccCCCceEEEEEEeCCeEEEecCCCcCCCC-----CCCCCCceeEeCceEEeeCCCCCCCCceE
Q psy8107 3 SVKKWLLRKKH-QIELARKRGWKGYWVCLKGTTLLFYPCDSREGRS-----VDAAPKHLIIVDGAIMQPIPEHPKRDYIF 76 (1613)
Q Consensus 3 ~~Kg~L~~K~~-k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~-----~~~~p~~~I~l~~~~~~~a~dy~KK~nVF 76 (1613)
...|||.+|+. ..+...+|+|+++|+||+|+.|+||||+...... ....|...|+|.+|.++.+.|++||+|||
T Consensus 13 ~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~kr~~~F 92 (129)
T 2p0d_A 13 EKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRNVL 92 (129)
T ss_dssp EEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEECTTSCSSSSEE
T ss_pred eEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEECCCCCCCCcEE
Confidence 35789988632 1111113899999999999999999999643321 34578999999999999999999999999
Q ss_pred EEEcCCCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 77 CLSTAFGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 77 ~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
+|+|++|++|+|||+|++||++||++|+.|+..
T Consensus 93 ~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~ 125 (129)
T 2p0d_A 93 HIRTIPGHEFLLQSDHETELRAWHRALRTVIER 125 (129)
T ss_dssp EEECTTSCEEEEECSCHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999863
No 27
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.72 E-value=2.5e-17 Score=167.59 Aligned_cols=103 Identities=29% Similarity=0.581 Sum_probs=87.1
Q ss_pred cccceEEecc----cccccccCCCceEEEEEEeCCeEEEecCCCcCCCCC---CCCCCceeEeCceEEeeCCCCCCCCce
Q psy8107 3 SVKKWLLRKK----HQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSV---DAAPKHLIIVDGAIMQPIPEHPKRDYI 75 (1613)
Q Consensus 3 ~~Kg~L~~K~----~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~---~~~p~~~I~l~~~~~~~a~dy~KK~nV 75 (1613)
.+.|+|.||. +|+ ...|+|+++|+||+|+.||||+.....+.++ ...|...|+|.|+.++ ..|++||+||
T Consensus 2 ~~~G~L~rk~llK~G~k--~~~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~-~~e~~~~~~~ 78 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRK--PALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQ-LPDDPEHPDI 78 (126)
T ss_dssp CEEEEEEEEEEEBTTBC--CSSCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEE-CCCCTTSTTE
T ss_pred ceeeeeeeeehhhcCCc--ccccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEE-ecCCCCCCCE
Confidence 4568888762 222 3468999999999999999999775444322 3578899999999998 8899999999
Q ss_pred EEEEcC-CCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 76 FCLSTA-FGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 76 F~L~t~-dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
|+|+++ +|.+|+|||+++++|++|+++|+.|+.
T Consensus 79 F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 79 FQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACK 112 (126)
T ss_dssp EEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 999999 799999999999999999999999987
No 28
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.72 E-value=1.8e-17 Score=166.11 Aligned_cols=99 Identities=18% Similarity=0.246 Sum_probs=84.7
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEe--eCCCCCCCCceEEEEcC
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQ--PIPEHPKRDYIFCLSTA 81 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~--~a~dy~KK~nVF~L~t~ 81 (1613)
..|||.+|.+.+ .++.|+||++|+||+|+.||+|||+.. ..|...|+|.++.|. .+.++.+|+|||+|+++
T Consensus 2 keG~L~kK~g~~-~~~~k~Wk~rwfvL~~~~L~~yk~~~~------~~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~ 74 (112)
T 3cxb_B 2 KEGMLHYKAGTS-YLGKEHWKTCFVVLSNGILYQYPDRTD------VIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILS 74 (112)
T ss_dssp EEEEEEECCSCC-CSSCCCCEEEEEEEETTEEEEESSSSC------CSCSEEEETTC-CEEEEEECCCSSCTTEEEEEET
T ss_pred ceEEEEEeCCCC-CCCCCCceEEEEEEECCEEEEECCCCC------CCccceEEecCCEEEeeeccCCCCCCeEEEEEcC
Confidence 479999885422 256789999999999999999999842 356788999988777 67899999999999999
Q ss_pred CCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 82 FGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 82 dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
++.+|+|||+|++||++||++|+.|+..
T Consensus 75 ~~~~y~f~A~s~ee~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 75 DRPCLELSAESEAEMAEWMQHLCQAVSK 102 (112)
T ss_dssp TSCCEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEcCCHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999988764
No 29
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.71 E-value=3e-17 Score=166.43 Aligned_cols=107 Identities=24% Similarity=0.347 Sum_probs=89.9
Q ss_pred cccceEEecccc---cccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEE
Q psy8107 3 SVKKWLLRKKHQ---IELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLS 79 (1613)
Q Consensus 3 ~~Kg~L~~K~~k---~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~ 79 (1613)
...|||.+|... ....+.++||++|+||+|+.|++||++..........+...|++.+|.++.+.||.||+|+|+|.
T Consensus 9 ~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~r~~~F~i~ 88 (123)
T 1wjm_A 9 QMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLG 88 (123)
T ss_dssp CEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECTTCSSCSSEEEEE
T ss_pred EEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEEeecccccCCCCEEEEE
Confidence 457899888642 11235789999999999999999999865433223345668999999999999999999999999
Q ss_pred cCCCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 80 TAFGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 80 t~dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
|++|++|+|||+|++||++||++|+.+++.
T Consensus 89 ~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~ 118 (123)
T 1wjm_A 89 LQDGKEYLFQAKDEAEMSSWLRVVNAAIAS 118 (123)
T ss_dssp CSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EcCCcEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999873
No 30
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.64 E-value=3.3e-16 Score=153.81 Aligned_cols=103 Identities=23% Similarity=0.413 Sum_probs=85.3
Q ss_pred ccceEEeccc---ccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEc
Q psy8107 4 VKKWLLRKKH---QIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLST 80 (1613)
Q Consensus 4 ~Kg~L~~K~~---k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t 80 (1613)
++|||.+|.. .......++||+.|+||+|+.|++||++.....+....+...|++.+|.++.+.++.+|+|+|+|.|
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~ 80 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRL 80 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEECSSCCSSSSEEEEEC
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEEEcccccCCccEEEEEe
Confidence 4689998862 1111356889999999999999999998643212223466789999999999999999999999999
Q ss_pred CCCCeEEeecCCHHHHHHHHHHHHHH
Q psy8107 81 AFGDAYLFQAPCQVELENWVNSIHSA 106 (1613)
Q Consensus 81 ~dg~~yLFQA~~~~em~~Wi~~I~~a 106 (1613)
+++++|+|||+|++||++||++|+.|
T Consensus 81 ~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 81 SDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp TTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 99999999999999999999999864
No 31
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=5.1e-14 Score=141.62 Aligned_cols=97 Identities=26% Similarity=0.490 Sum_probs=84.0
Q ss_pred ccceeeecccceEEEEEEecCCC-CccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCC
Q psy8107 345 THEVVEVCAKILYQVELQRTTLD-HMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDL 423 (1613)
Q Consensus 345 ~~~~iEv~~~~~~~v~l~k~~~~-~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l 423 (1613)
+||++|+||+.++.|+|.|.+.. .+|||+|.. +.++ ...+++|.+|.|+|+|+++||++||+|++|||++|.++
T Consensus 5 ~~~~~e~~~~~~~~v~l~k~~~~~~~~G~~v~~-~~~~----~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~ 79 (114)
T 2d8i_A 5 SSGEIEICPKVTQSIHIEKSDTAADTYGFSLSS-VEED----GIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADAL 79 (114)
T ss_dssp CCCCCCSSCCEEEEEEEECSCTTTCCCCCEEEE-EEET----TEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGC
T ss_pred cccceEeccCceEEEEEEeCCCCccccCEEEEe-cCcC----CcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCc
Confidence 48999999999999999998854 389999987 2221 11469999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCeEEEEEeecCC
Q psy8107 424 DMMYLESVLQEELSLCMMMRSSRT 447 (1613)
Q Consensus 424 ~~~~~~~ll~~~~~l~L~vr~~~~ 447 (1613)
++.++.+++++ ..+.|+|+|.+.
T Consensus 80 ~~~~~~~~l~~-~~v~l~v~R~p~ 102 (114)
T 2d8i_A 80 NSSMLKDFLSQ-PSLGLLVRTYPE 102 (114)
T ss_dssp CHHHHHHHHTS-SEEEEEEEECCC
T ss_pred CHHHHHHHHhC-CcEEEEEEECCC
Confidence 99999999985 599999987644
No 32
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.43 E-value=6.5e-13 Score=131.39 Aligned_cols=94 Identities=19% Similarity=0.355 Sum_probs=82.5
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCCC
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAFG 83 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~dg 83 (1613)
+.|||.++++. .++||+.||||++..|++||++.. ..|...|+|.++.+....+..+++|+|+|.++++
T Consensus 10 ~~G~L~K~~~~-----~~~Wk~RwfvL~~~~L~yyk~~~~------~~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~ 78 (109)
T 1wgq_A 10 MSGYLYRSKGS-----KKPWKHLWFVIKNKVLYTYAASED------VAALESQPLLGFTVTLVKDENSESKVFQLLHKGM 78 (109)
T ss_dssp CEEEEEEESST-----TSCCEEEEEEEETTEEEEESCTTC------SSCSEEEECSSEEEEECCCSSCSSSEEEEEETTE
T ss_pred EEEEEEeCCCC-----CCCceeEEEEEeCCEEEEECCCCc------CccCceEECCCCEEEECCCCCCCCcEEEEEeCCC
Confidence 57999876432 468999999999999999998742 4578899999999988888778899999999999
Q ss_pred CeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 84 DAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 84 ~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
+.|+|+|+|++|++.||++|+.|+.
T Consensus 79 ~~~~~~a~s~~e~~~Wi~al~~a~~ 103 (109)
T 1wgq_A 79 VFYVFKADDAHSTQRWIDAFQEGTV 103 (109)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHS
T ss_pred eEEEEECCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998854
No 33
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.41 E-value=4.6e-13 Score=143.04 Aligned_cols=101 Identities=23% Similarity=0.397 Sum_probs=75.4
Q ss_pred cccceEEeccc-----ccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCce--eEeCceEEeeCCCCCCCCce
Q psy8107 3 SVKKWLLRKKH-----QIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHL--IIVDGAIMQPIPEHPKRDYI 75 (1613)
Q Consensus 3 ~~Kg~L~~K~~-----k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~--I~l~~~~~~~a~dy~KK~nV 75 (1613)
..+|||.+|.. |+.....++||+.||||+|+.|++||++.... ..+.+. |.+.+|.++.+.++.+|+|+
T Consensus 4 ~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~~~L~yyk~~~~~~----~~~~g~i~l~~~~~~~~~~~~~~~~~~~ 79 (168)
T 2j59_M 4 AKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQT----TPSEEEQPISVNACLIDISYSETKRKNV 79 (168)
T ss_dssp CEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTCC------------CEECSSCEEEECSSSCSCSSE
T ss_pred cEEEEEeeeeecccCCcccCCCCCCceEEEEEEeCCEEEEEECCcccc----cccCCceEecccceEEEeccccCCCCCE
Confidence 46899998742 22224567899999999999999999985421 123334 55556888888899999999
Q ss_pred EEEEcCCCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 76 FCLSTAFGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 76 F~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
|+|.+++ ++|+|||++++||+.||++|+.|+.
T Consensus 80 F~I~t~~-r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 80 FRLTTSD-CECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp EEEECSS-CEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred EEEEeCC-ceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 9999998 7899999999999999999998865
No 34
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.38 E-value=9.5e-13 Score=131.94 Aligned_cols=92 Identities=12% Similarity=0.191 Sum_probs=76.8
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCC---eEEEecCCCcCCCCCCCCCCceeEeCceEEee--CCCCCCCCceEEE
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGT---TLLFYPCDSREGRSVDAAPKHLIIVDGAIMQP--IPEHPKRDYIFCL 78 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~---~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~--a~dy~KK~nVF~L 78 (1613)
+.|||.++++ .+.||++||||+++ +||+||++. +..|...|.|.+|.+.. ..+..+|+|+|+|
T Consensus 10 ~~G~L~k~~~------~~~WkkrWfVL~~~~~~~Ly~Yk~~~------d~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki 77 (112)
T 2coc_A 10 LCGPLRLSES------GETWSEVWAAIPMSDPQVLHLQGGSQ------DGRLPRTIPLPSCKLSVPDPEERLDSGHVWKL 77 (112)
T ss_dssp SEEEEEEESS------SSCEEEEEEECCTTCTTCEEEECCTT------CSSSCSEECGGGCEEECCCSSSCCSSSEEEEE
T ss_pred EEEEEEecCC------CCCceEEEEEEECCCccEEEEECCCC------ccCcceEEEcCCCEEEecCcccccCCCCEEEE
Confidence 4589988632 36799999999985 899999884 34578899999998885 3455679999999
Q ss_pred EcCCCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 79 STAFGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 79 ~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
.+ .++.|.|+|+|+++|+.|+++|+.|+.
T Consensus 78 ~~-~~~~y~f~A~s~e~~~~Wl~al~~A~~ 106 (112)
T 2coc_A 78 QW-AKQSWYLSASSAELQQQWLETLSTAAH 106 (112)
T ss_dssp EE-TTEEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred ec-CCeEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 94 568999999999999999999998865
No 35
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.37 E-value=2.2e-12 Score=125.05 Aligned_cols=87 Identities=26% Similarity=0.457 Sum_probs=71.7
Q ss_pred ccceEEEEEEecC-CCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHH
Q psy8107 353 AKILYQVELQRTT-LDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESV 431 (1613)
Q Consensus 353 ~~~~~~v~l~k~~-~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~l 431 (1613)
.+.++.|+|+|.+ +..+|||+|+. .++++ ..+++|.+|.|+|+|+++||++||+|++|||++|.+++++++.++
T Consensus 4 ~~~~~~v~i~k~~~~~~~~Gf~v~~--~~~~~---~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~ 78 (94)
T 3kzd_A 4 GKVTHSIHIEKSDTAADTYGFSLSS--VEEDG---IRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDF 78 (94)
T ss_dssp CCEEEEEEEEC------CCSEEEEE--ECSSS---SCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHH
T ss_pred ccceeEEEEEeCCCCcCCcCEEEEe--cCCCC---cCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3678999999987 45799999987 22211 246999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEEeec
Q psy8107 432 LQEELSLCMMMRSS 445 (1613)
Q Consensus 432 l~~~~~l~L~vr~~ 445 (1613)
++ +++++|+|+..
T Consensus 79 l~-~~~l~ltV~~~ 91 (94)
T 3kzd_A 79 LS-QPSLGLLVRTY 91 (94)
T ss_dssp HH-SSEEEEEEEEC
T ss_pred Hh-CCeEEEEEEec
Confidence 98 57899999863
No 36
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.37 E-value=3.6e-12 Score=126.75 Aligned_cols=96 Identities=28% Similarity=0.493 Sum_probs=83.4
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEee-CCCCCCCCceEEEEcC
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQP-IPEHPKRDYIFCLSTA 81 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~-a~dy~KK~nVF~L~t~ 81 (1613)
...|||.++++. .++||+.|+||+++.|++|+++. ...|.+.|.|.++.... ..+..+++|+|.|.++
T Consensus 6 ~~~G~L~K~g~~-----~~~Wk~R~fvL~~~~L~yy~~~~------~~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~ 74 (113)
T 1pls_A 6 IREGYLVKKGSV-----FNTWKPMWVVLLEDGIEFYKKKS------DNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTT 74 (113)
T ss_dssp SEEEEEEEESSS-----SSCCEEEEEEEETTEEEEESSTT------CSSCSEEEESSSCCEESSCCSSCCSSSEEEEEET
T ss_pred cEEEEEEEeCCC-----CCCceEEEEEEECCEEEEEeCCC------CCCcceEEEcCCCEEEEecCCCCCCccEEEEEcC
Confidence 357999877542 46799999999999999999873 34688899999998765 5677899999999999
Q ss_pred CCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 82 FGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 82 dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
+++.|+|+|+|++|++.||++|+.|+..
T Consensus 75 ~~r~~~l~a~s~~e~~~Wi~ai~~~~~~ 102 (113)
T 1pls_A 75 KQQDHFFQAAFLEERDAWVRDINKAIKC 102 (113)
T ss_dssp TTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999875
No 37
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.37 E-value=1.9e-12 Score=131.20 Aligned_cols=103 Identities=17% Similarity=0.280 Sum_probs=83.8
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEec----CCCcCCCCCCCCCCceeEeCceEEee---CCCCCCCCceE
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYP----CDSREGRSVDAAPKHLIIVDGAIMQP---IPEHPKRDYIF 76 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyK----d~~~~~~~~~~~p~~~I~l~~~~~~~---a~dy~KK~nVF 76 (1613)
..|||.+.++.. .+.||+.|+||+|..||+|| ++. ...|.+.|.|.++.++. ..|..+++++|
T Consensus 10 ~~G~L~KqG~~~----~K~WKrRwFVL~~~~LyYfk~~~~~~~------~~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F 79 (126)
T 1wi1_A 10 HSGYLWAIGKNV----WKRWKKRFFVLVQVSQYTFAMCSYREK------KAEPQELLQLDGYTVDYTDPQPGLEGGRAFF 79 (126)
T ss_dssp EEEEEEEECSSS----CCSCEEEEEEEEEEETTEEEEEECCSS------SSCCSEEEECSSCEEEECCCCSSCCSCSSEE
T ss_pred eeEEEEEeCCCc----ccccceEEEEEeCCEEEEEEccccccc------CCCCceEEECCCcEEEEecCCcccccCceEE
Confidence 468888875532 36799999999999999999 763 35688899999998773 45667899999
Q ss_pred EEEcCCCCeEEeecCCHHHHHHHHHHHHHHHHhhhhccCCcc
Q psy8107 77 CLSTAFGDAYLFQAPCQVELENWVNSIHSACAAAFARHRGKT 118 (1613)
Q Consensus 77 ~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa~~~~r~~~~~ 118 (1613)
++.++ |+.|+|+|+|++||+.||++|+.|+. ...+|..|.
T Consensus 80 ~~v~~-~~ty~~~Adseee~~~WikAi~~A~~-~~~~~~~~~ 119 (126)
T 1wi1_A 80 NAVKE-GDTVIFASDDEQDRILWVQAMYRATG-QSHKPVPPT 119 (126)
T ss_dssp EEECS-SCEEEEECSSHHHHHHHHHHHHHHHT-CSSCCCCCC
T ss_pred EEecC-CceEEEEcCCHHHHHHHHHHHHHHhc-cccCCCCCC
Confidence 98875 67899999999999999999998875 455555553
No 38
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.34 E-value=4.1e-12 Score=125.28 Aligned_cols=93 Identities=20% Similarity=0.304 Sum_probs=80.3
Q ss_pred eeecccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHH
Q psy8107 349 VEVCAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYL 428 (1613)
Q Consensus 349 iEv~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~ 428 (1613)
-+.++...++|+|.|.+. ++|||++.+ +.....+++|.+|.++|+|+++||++||+|+.|||++|.+++++++
T Consensus 9 ~~~~~~~~~~v~l~k~~~-~~lG~~~~~------~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~ 81 (104)
T 1wi2_A 9 NELTQFLPRIVTLKKPPG-AQLGFNIRG------GKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKA 81 (104)
T ss_dssp CCCCSSCCEEEEECCCTT-CCCSEEEEC------CSSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHH
T ss_pred cCcCCCCCEEEEEEeCCC-CCccEEEEc------ccCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHH
Confidence 346666779999999875 799999987 2233356999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEEEEeecCCC
Q psy8107 429 ESVLQEELSLCMMMRSSRTE 448 (1613)
Q Consensus 429 ~~ll~~~~~l~L~vr~~~~~ 448 (1613)
.++++.+..+.|+|+|....
T Consensus 82 ~~~l~~~~~v~l~v~r~~~~ 101 (104)
T 1wi2_A 82 VEILKTAREISMRVRFFSGP 101 (104)
T ss_dssp HHHHHHSSSEEEEEECCCCS
T ss_pred HHHHhCCCEEEEEEEECCCC
Confidence 99998789999999876544
No 39
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.34 E-value=3.1e-12 Score=121.01 Aligned_cols=76 Identities=18% Similarity=0.265 Sum_probs=67.6
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
..|.|+|.|++. ++|||+++. + +|.+|.+||+|+++||++||+|++|||++|.+++|+|+.++|++
T Consensus 4 ~~r~v~l~k~~~-g~~Gf~i~~------g-------~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr~ 69 (82)
T 1r6j_A 4 DPRTITMHKDST-GHVGFIFKN------G-------KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILST 69 (82)
T ss_dssp CCEEEEEECCTT-SCCCEEEET------T-------EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHH
T ss_pred ceEEEEEEECCC-CCeEEEEEC------C-------EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Confidence 458999999874 789999865 1 48999999999999999999999999999999999999999975
Q ss_pred C-CeEEEEEee
Q psy8107 435 E-LSLCMMMRS 444 (1613)
Q Consensus 435 ~-~~l~L~vr~ 444 (1613)
. .+++|+|.+
T Consensus 70 ~g~~V~L~v~p 80 (82)
T 1r6j_A 70 SGTVVTITIMP 80 (82)
T ss_dssp SCSEEEEEEEE
T ss_pred CCCEEEEEEEe
Confidence 5 789999864
No 40
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.32 E-value=4.7e-12 Score=124.04 Aligned_cols=98 Identities=18% Similarity=0.377 Sum_probs=82.7
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeC---CCCCCCCceEEEEc
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPI---PEHPKRDYIFCLST 80 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a---~dy~KK~nVF~L~t 80 (1613)
..|||.++..+.. ...++|++.|+||+++.|++|+++. ...|...|+|.++.+... .+..+++|+|.+.+
T Consensus 5 ~~G~L~K~~~~~~-~~~~~Wk~R~fvL~~~~L~yy~~~~------~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~ 77 (108)
T 1u5d_A 5 KQGYLEKKSKDHS-FFGSEWQKRWCVVSRGLFYYYANEK------SKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTS 77 (108)
T ss_dssp EEEEEEEEEECSS-SSCEEEEEEEEEEETTEEEEESSTT------CSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEEC
T ss_pred EEEEEEEcCCCCC-ccccCceeeEEEEeCCEEEEecCCC------CCCCCEEEEecceEEEeCCccccccCCcceEEEEc
Confidence 4688888765322 1236799999999999999999874 346788999999998776 35668899999999
Q ss_pred CCCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 81 AFGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 81 ~dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
++++.|+|+|+|++|++.|+++|+.|++
T Consensus 78 ~~~r~~~l~a~s~~e~~~Wi~ai~~~i~ 105 (108)
T 1u5d_A 78 QDRRTYEFTATSPAEARDWVDQISFLLK 105 (108)
T ss_dssp SSSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999976
No 41
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.30 E-value=9.6e-12 Score=127.93 Aligned_cols=94 Identities=17% Similarity=0.394 Sum_probs=77.0
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF 82 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d 82 (1613)
...|||.+++ ..++||+.||||+++.|++||++. +..|.+.|.|.+|.+.... ..|++|.|+|.+++
T Consensus 9 ~k~GwL~K~g------~~k~WkrRWfVLk~~~L~yyk~~~------~~~p~G~I~L~~~~v~~~~-~~~~~~~F~i~~~~ 75 (130)
T 1v88_A 9 VMADWLKIRG------TLKSWTKLWCVLKPGVLLIYKTQK------NGQWVGTVLLNACEIIERP-SKKDGFCFKLFHPL 75 (130)
T ss_dssp CEEEEEEECC------SSSSCEEEEEEEETTEEEEESCSS------SCCCCEEEECSSCEECCCC-TTTSSCEEEEECTT
T ss_pred EEEeEEEEeC------CCCCceEEEEEEECCEEEEECCCC------CCCceEEEEcCCCEEEECC-CCCCCeEEEEEcCC
Confidence 3578987754 246899999999999999999984 3568899999999875443 34677999999876
Q ss_pred CC-----------------------eEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 83 GD-----------------------AYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 83 g~-----------------------~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
.. .|.|+|+|++||+.||++|+.|++.
T Consensus 76 ~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~ 125 (130)
T 1v88_A 76 EQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKS 125 (130)
T ss_dssp CCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTT
T ss_pred ccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 43 3999999999999999999999763
No 42
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.30 E-value=1.2e-11 Score=121.65 Aligned_cols=93 Identities=23% Similarity=0.417 Sum_probs=76.5
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCC--eEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCC-----CCCCCceE
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGT--TLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPE-----HPKRDYIF 76 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~--~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~d-----y~KK~nVF 76 (1613)
..|||.++.+. .++||+.|+||+++ .|++||++. ...|.+.|+|.+|.+....+ ..+++|+|
T Consensus 9 ~~G~L~K~g~~-----~~~Wk~R~fvL~~~~~~L~yyk~~~------~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F 77 (109)
T 2i5f_A 9 KQGCLLKQGHR-----RKNWKVRKFILREDPAYLHYYDPAG------AEDPLGAIHLRGCVVTSVESNSNGRKSEEENLF 77 (109)
T ss_dssp EEEEEEEECTT-----TCCEEEEEEEEETTTTEEEEECTTS------CSSCSEEEECTTCEEEEECC--------CCSEE
T ss_pred EEEEEEEcCCC-----CCCceEEEEEEeCCCcEEEEECCCC------CCCccEEEECCCCEEEEccCCcccccCCCceEE
Confidence 57888887543 46799999999986 999999873 34678899999987655432 23589999
Q ss_pred EEEcCCCCeEEeecCCHHHHHHHHHHHHHHH
Q psy8107 77 CLSTAFGDAYLFQAPCQVELENWVNSIHSAC 107 (1613)
Q Consensus 77 ~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aa 107 (1613)
.|.++++..|+|+|+|++|++.|+++|+.|+
T Consensus 78 ~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 78 EIITADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp EEECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999886
No 43
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.30 E-value=3.9e-12 Score=129.54 Aligned_cols=102 Identities=13% Similarity=0.180 Sum_probs=81.5
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcC---CCCCCCCCCceeEeCceEEeeCC-CCCCCCceEEE
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSRE---GRSVDAAPKHLIIVDGAIMQPIP-EHPKRDYIFCL 78 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~---~~~~~~~p~~~I~l~~~~~~~a~-dy~KK~nVF~L 78 (1613)
...|||.+++.. .+.||+.||||+++.|++||++... .......+++.|+|.+|.++... +..+|+|+|++
T Consensus 13 ~k~G~L~K~g~~-----~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~~~~~k~~~F~I 87 (124)
T 2w2x_D 13 KQQGELYMWDSI-----DQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGKNQKSFVFIL 87 (124)
T ss_dssp CCEEEEEEEETT-----TTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTCBTTBSEEEEE
T ss_pred ceeEEEEEECCC-----CCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEEccCCcCCCCEEEEE
Confidence 357999887543 3569999999999999999986431 11122456889999999988886 45689999999
Q ss_pred EcCCC--CeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 79 STAFG--DAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 79 ~t~dg--~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
.+++. ..|+|+|++++||+.||++|..|+..
T Consensus 88 ~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~ 120 (124)
T 2w2x_D 88 EPKQQGDPPVEFATDKVEELFEWFQSIREITWK 120 (124)
T ss_dssp EECC--CCCEEEEECCCHHHHHHHHHHHHHHC-
T ss_pred ECCCCCCceEEEEECCHHHHHHHHHHHHHHHHh
Confidence 99875 67999999999999999999988653
No 44
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.29 E-value=3.4e-12 Score=126.15 Aligned_cols=93 Identities=19% Similarity=0.378 Sum_probs=77.0
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF 82 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d 82 (1613)
...|||.++ ..++||+.||||+++.|++||++.. ...+...|++.+|.+....+ .+++|+|+|.+++
T Consensus 9 ~~~G~L~K~-------~~k~Wk~RwfvL~~~~L~yyk~~~~-----~~~~~~~i~l~~~~v~~~~~-~~~~~~F~i~~~~ 75 (107)
T 2cof_A 9 ETSSYLNVL-------VNSQWKSRWCSVRDNHLHFYQDRNR-----SKVAQQPLSLVGCEVVPDPS-PDHLYSFRILHKG 75 (107)
T ss_dssp TTCCEEEEE-------ETTEEEEEEEEECSSCEEEECSSTT-----CSEEEEEECTTTCEEECCCB-TTBSCEEEEEETT
T ss_pred cEeEEEEEe-------cCCCcceEEEEEECCEEEEEeCCcc-----cCCCeeEEeccceEEEECCC-CCCCeEEEEEeCC
Confidence 467898886 2467999999999999999998743 23355567777886666655 5899999999988
Q ss_pred CCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 83 GDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 83 g~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
.+.|+|+|+|++||+.||++|+.|+.
T Consensus 76 ~r~~~l~A~s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 76 EELAKLEAKSSEEMGHWLGLLLSESG 101 (107)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHSS
T ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 89999999999999999999998865
No 45
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.29 E-value=1.8e-11 Score=128.66 Aligned_cols=93 Identities=20% Similarity=0.261 Sum_probs=74.0
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeC-CCCCCCCceEEEEcCC
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPI-PEHPKRDYIFCLSTAF 82 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a-~dy~KK~nVF~L~t~d 82 (1613)
..|||.++++. .+.||++||||+|+.|++||++.. ..+.+.|+|.++.+... ....+++|.|++.|++
T Consensus 20 keG~L~Kkg~~-----~k~WkrRWFvLk~~~L~Yyk~~~d------~~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~ 88 (149)
T 1x1f_A 20 FEGFLLIKRSG-----YREYEHYWTELRGTTLFFYTDKKS------IIYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPK 88 (149)
T ss_dssp EEEEEEEECTT-----CCSCEEEEEEEETTEEEEESCSSC------SSCSEECCCSSCCEEEECCCTTSCCCEEEEECSS
T ss_pred EEEEEEEeCCC-----CCCceeEEEEEcCCEEEEEeCCCc------cccCcEEECCCceEEeeccCCCCcCcEEEEEcCC
Confidence 46898887643 378999999999999999999843 34557888888755422 1123568999999976
Q ss_pred CCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 83 GDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 83 g~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
+.|+|+|+|++||+.||++|+.++.
T Consensus 89 -r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 89 -EEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp -CCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred -CEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 6799999999999999999998866
No 46
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.29 E-value=7.9e-12 Score=126.79 Aligned_cols=97 Identities=20% Similarity=0.411 Sum_probs=81.7
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCC--CCCCCCceEEEEc
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIP--EHPKRDYIFCLST 80 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~--dy~KK~nVF~L~t 80 (1613)
...|||.+++++ ..++||+.||||++..|++||++.. ..|...|.|.++.+.... +..+++|+|.|.+
T Consensus 22 ~~~G~L~K~~~~----~~~~Wk~R~fvL~~~~L~yy~~~~~------~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~ 91 (128)
T 2dkp_A 22 VRRGWLYKQDST----GMKLWKKRWFVLSDLCLFYYRDEKE------EGILGSILLPSFQIALLTSEDHINRKYAFKAAH 91 (128)
T ss_dssp CEEEEEEEECCS----SSCCEEEEEEEEETTEEEEESSTTC------CSEEEEECGGGSEEEECCGGGCCSSCSEEEEEC
T ss_pred EEEEEEEEeCCC----CCCCceeEEEEEeCCEEEEECCCCC------cccceEEEcCceEEEEcCCcccCCCCeEEEEEc
Confidence 357999877653 2467999999999999999998742 356788999988777653 4568999999999
Q ss_pred CCCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 81 AFGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 81 ~dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
++++.|+|+|++++|++.||++|+.|+..
T Consensus 92 ~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 120 (128)
T 2dkp_A 92 PNMRTYYFCTDTGKEMELWMKAMLDAALV 120 (128)
T ss_dssp SSSCCEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999998763
No 47
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=1.5e-11 Score=123.63 Aligned_cols=95 Identities=19% Similarity=0.370 Sum_probs=80.4
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeC--CCCCCCCceEEEEcC
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPI--PEHPKRDYIFCLSTA 81 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a--~dy~KK~nVF~L~t~ 81 (1613)
..|||.+++.+ ..++||+.||||++..|++|+++.. ..|...|+|.++.+... .+..+++|+|.|.++
T Consensus 24 ~~G~L~K~~~~----~~~~Wk~R~fvL~~~~L~yy~~~~~------~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~ 93 (122)
T 2yry_A 24 KAGWLFKQASS----GVKQWNKRWFVLVDRCLFYYKDEKE------ESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHA 93 (122)
T ss_dssp EEEEEEEECCS----SSCCEEEEEEEEETTEEEEESSTTC------CSCCEEEESTTCCCEECCTTCSCSSSSEEEEECS
T ss_pred EEEEEEEECCC----CCCCcEEEEEEEeCCEEEEECCCCC------CCcccEEEcCCCEEEEcCccccCCcccEEEEecC
Confidence 57898877532 2468999999999999999998743 35788999999875544 366789999999999
Q ss_pred CCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 82 FGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 82 dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
+++.|+|+|++++|++.||++|+.|+.
T Consensus 94 ~~r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 94 GVRTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred CCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999875
No 48
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.28 E-value=1.7e-11 Score=117.46 Aligned_cols=85 Identities=16% Similarity=0.244 Sum_probs=73.4
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhc-CCCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHN-GLIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~-GL~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
.+++|++.|.+. ++|||++.+ +.....+++|++|.|+|+|+++ ||++||+|++|||++|.++++.++..+++
T Consensus 4 ~~~~v~l~k~~~-~~lG~~i~~------~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~ 76 (90)
T 1qav_A 4 QRRRVTVRKADA-GGLGISIKG------GRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALK 76 (90)
T ss_dssp SCEEEEEECCTT-TCCCEEEEE------EGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHH
T ss_pred ccEEEEEEeCCC-CCcCEEEEc------ccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 468999999765 899999988 2222356999999999999999 99999999999999999999999999996
Q ss_pred cC-CeEEEEEeecC
Q psy8107 434 EE-LSLCMMMRSSR 446 (1613)
Q Consensus 434 ~~-~~l~L~vr~~~ 446 (1613)
.. ..+.|+|+|.+
T Consensus 77 ~~~~~v~l~v~r~r 90 (90)
T 1qav_A 77 KTGKEVVLEVKYMK 90 (90)
T ss_dssp TCCSEEEEEEEECC
T ss_pred hCCCeEEEEEEEeC
Confidence 44 78999998753
No 49
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=7.3e-12 Score=122.68 Aligned_cols=93 Identities=24% Similarity=0.283 Sum_probs=80.1
Q ss_pred ccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 353 AKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 353 ~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
|...+.|++.|.....+|||++.+ +.....+++|.+|.++|+|+++||++||+|+.|||++|.++++.++.+.+
T Consensus 6 ~~~~~~v~l~~~~~~~~lG~~~~~------~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~ 79 (101)
T 1uez_A 6 SGEVRLVSLRRAKAHEGLGFSIRG------GSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKAL 79 (101)
T ss_dssp SCCCEEECCCCCCTTTCSSEEEEE------CTTTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHHHHHHS
T ss_pred CCccEEEEEEECCCCCcccEEEeC------CCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHhh
Confidence 567789999997767899999988 22233569999999999999999999999999999999999999988888
Q ss_pred hcCCeEEEEEeecCCCCCC
Q psy8107 433 QEELSLCMMMRSSRTEPPE 451 (1613)
Q Consensus 433 ~~~~~l~L~vr~~~~~p~~ 451 (1613)
+.+..+.|+|+|.+..|..
T Consensus 80 ~~~~~v~l~v~R~g~~p~~ 98 (101)
T 1uez_A 80 KGSKKLVLSVYSAGRISGP 98 (101)
T ss_dssp SSSSSCCEEECCCCCCSSS
T ss_pred cCCCeEEEEEEECCccCCC
Confidence 7678899999988776653
No 50
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.27 E-value=1.5e-11 Score=128.61 Aligned_cols=98 Identities=19% Similarity=0.343 Sum_probs=83.2
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCC---CCCCCceEEEEc
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPE---HPKRDYIFCLST 80 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~d---y~KK~nVF~L~t 80 (1613)
..|||.+|+++.. ...++||+.||||+|+.|++||++.. ..+.+.|.|.++.+..+.+ ..+|+|+|.|.+
T Consensus 19 ~~G~L~K~g~~~~-~~~k~WkkR~fvL~~~~L~yyk~~~~------~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~ 91 (148)
T 1u5f_A 19 KAGYLEKRRKDHS-FLGFEWQKRWCALSKTVFYYYGSDKD------KQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICA 91 (148)
T ss_dssp EEEEEEEECCCSS-CSSCSEEEEEEEEETTEEEEESSTTC------SSCSEEEECTTCEEEECTTSCSSTTGGGEEEEEC
T ss_pred EEEEEEEeCCCCC-CcCCCceeEEEEEECCEEEEEcCCCC------cccceEEEcCCcEEEECCCcccCCCCccEEEEEC
Confidence 5799988876432 12478999999999999999998732 4678899999998887653 667889999999
Q ss_pred CCCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 81 AFGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 81 ~dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
++++.|+|+|++++|++.||++|+.|+.
T Consensus 92 ~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 119 (148)
T 1u5f_A 92 PDKRIYQFTAASPKDAEEWVQQLKFILQ 119 (148)
T ss_dssp TTSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998865
No 51
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=2.1e-11 Score=121.63 Aligned_cols=96 Identities=19% Similarity=0.371 Sum_probs=81.0
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeC--CCCCCCCceEEEEc
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPI--PEHPKRDYIFCLST 80 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a--~dy~KK~nVF~L~t 80 (1613)
...|||.+++++ ..++||+.||||++..|++|+++.. ..|...|+|.++.+... .+..+++|+|.|.+
T Consensus 12 ~~~G~L~K~~~~----~~~~Wk~R~fvL~~~~L~yy~~~~~------~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~ 81 (117)
T 2d9y_A 12 TKAGWLFKQASS----GVKQWNKRWFVLVDRCLFYYKDEKE------ESILGSIPLLSFRVAAVQPSDNISRKHTFKAEH 81 (117)
T ss_dssp CEEEEEEEECTT----SSSCEEEEEEEEETTEEEEESSTTC------CSCCEEEECSSCEEEECCTTTTCCCSSEEEEEC
T ss_pred eEEEEEEEeCCC----CCCCceEEEEEECCCEEEEECCCCC------CCcCCEEEeCCeEEEEcCccccCCCccEEEEEc
Confidence 367999877532 2468999999999999999998733 45788999999876554 36678999999999
Q ss_pred CCCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 81 AFGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 81 ~dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
++++.|+|+|++++|++.||++|+.|+.
T Consensus 82 ~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 82 AGVRTYFFSAESPEEQEAWIQAMGEAAR 109 (117)
T ss_dssp SSSCEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred CCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998865
No 52
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.27 E-value=2.9e-11 Score=115.99 Aligned_cols=87 Identities=20% Similarity=0.240 Sum_probs=74.2
Q ss_pred cccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHH
Q psy8107 352 CAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESV 431 (1613)
Q Consensus 352 ~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~l 431 (1613)
+|..++.|+|.|.+...+|||++.+ +..+ .+++|.+|.++|+|+++||++||+|+.|||++|.++++.++..+
T Consensus 3 ~~~~~~~v~l~k~~~~~~~G~~~~~------~~~~-~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~ 75 (91)
T 1m5z_A 3 TPVELHKVTLYKDSGMEDFGFSVAD------GLLE-KGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPL 75 (91)
T ss_dssp SCCEEEEEEEECCTTCSSSSEEEEE------CTTS-SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCcceEEEEEEECCCCCCccEEEEe------ccCC-CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3567889999998765789999988 2211 56999999999999999999999999999999999999999888
Q ss_pred Hhc-CCeEEEEEeec
Q psy8107 432 LQE-ELSLCMMMRSS 445 (1613)
Q Consensus 432 l~~-~~~l~L~vr~~ 445 (1613)
++. +..+.|+|.|.
T Consensus 76 ~~~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 76 IAESGNKLDLVISRN 90 (91)
T ss_dssp HHTSTTEEEEEEEEC
T ss_pred HHcCCCEEEEEEEeC
Confidence 854 47899998763
No 53
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.26 E-value=1.9e-11 Score=124.33 Aligned_cols=96 Identities=22% Similarity=0.407 Sum_probs=80.0
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCC--eEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCC-----CCCCceE
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGT--TLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEH-----PKRDYIF 76 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~--~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy-----~KK~nVF 76 (1613)
..|||.++.+. .++||+.||||+++ .|++|+++. ...|.+.|+|.+|.+....+- .+++|+|
T Consensus 20 ~~G~L~K~g~~-----~~~Wk~R~fvL~~~~~~L~yy~~~~------~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F 88 (129)
T 1x05_A 20 KQGCLLKQGHR-----RKNWKVRKFILREDPAYLHYYDPAG------AEDPLGAIHLRGCVVTSVESNSNGRKSEEENLF 88 (129)
T ss_dssp EEEEEEECCSS-----CCCCEEEEEEEEETTTEEEEECSSC------CSSCSEEEECTTCEEEECCCCCCSSSCSSCSEE
T ss_pred EEEEEEecCCC-----CCCCeeEEEEEeCCCCEEEEECCCC------CCcceeEEEccCCEEEEccCCccccccCCCeEE
Confidence 57888887553 46799999999976 899999762 346888999999987765432 3489999
Q ss_pred EEEcCCCCeEEeecCCHHHHHHHHHHHHHHHHhh
Q psy8107 77 CLSTAFGDAYLFQAPCQVELENWVNSIHSACAAA 110 (1613)
Q Consensus 77 ~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa~~ 110 (1613)
.|.+++++.|+|+|++++|++.||.+|+.|+...
T Consensus 89 ~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~ 122 (129)
T 1x05_A 89 EIITADEVHYFLQAATPKERTEWIKAIQMASRTG 122 (129)
T ss_dssp EEECTTCCCCEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred EEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999998753
No 54
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.26 E-value=2.9e-11 Score=121.82 Aligned_cols=97 Identities=20% Similarity=0.408 Sum_probs=81.9
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCC--CCCCCCceEEEEc
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIP--EHPKRDYIFCLST 80 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~--dy~KK~nVF~L~t 80 (1613)
...|||.+++++. .++||+.||||+++.|++||++.. ..|.+.|.|.++.+.... +..+++|+|.+.+
T Consensus 12 ~~~G~L~K~~~~~----~~~WkkR~fvL~~~~L~yy~~~~~------~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~ 81 (123)
T 1upq_A 12 HIRGWLHKQDSSG----LRLWKRRWFVLSGHCLFYYKDSRE------ESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEH 81 (123)
T ss_dssp EEEEEEEEECSSS----SCCEEEEEEEEETTEEEEESSTTC------CSCCEEEEGGGCEEEECCSSCTTSSSSEEEEEC
T ss_pred eEEEEEEeeCCCC----CCCceeEEEEEeCCEEEEECCCCC------cccceEEECCCCEEEECCCCccCCCcEEEEEEC
Confidence 3579999876422 367999999999999999998743 467889999999887774 3457899999999
Q ss_pred CCCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 81 AFGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 81 ~dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
++++.|+|+|++++|++.||++|+.|+..
T Consensus 82 ~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 82 PGMRTYVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp TTSCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred CCCeEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999764
No 55
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.25 E-value=2.2e-11 Score=125.55 Aligned_cols=98 Identities=18% Similarity=0.232 Sum_probs=75.6
Q ss_pred cccceEEEEEEecCCCCccceEEEEeecccc------cccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCH
Q psy8107 352 CAKILYQVELQRTTLDHMWGFSVEAELTENA------ERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDM 425 (1613)
Q Consensus 352 ~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~------~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~ 425 (1613)
+....+.|+|.|.+. ++|||++.+...... ......+++|++|.+||+|+++||++||+|++|||++|.++++
T Consensus 24 ~~~~~r~v~l~r~~~-~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~ 102 (132)
T 3l4f_D 24 YIIKEKTVLLQKKDS-EGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGH 102 (132)
T ss_dssp CCCCCCEEEEECCTT-SCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCH
T ss_pred cCCCCEEEEEEECCC-CcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCH
Confidence 334668999999664 799999999321100 0001126899999999999999999999999999999999999
Q ss_pred HHHHHHHhcC-CeEEEEEeecCCCCC
Q psy8107 426 MYLESVLQEE-LSLCMMMRSSRTEPP 450 (1613)
Q Consensus 426 ~~~~~ll~~~-~~l~L~vr~~~~~p~ 450 (1613)
.++.++++.. ..+.|+|.+..+.|.
T Consensus 103 ~~~~~~l~~~g~~v~l~v~~~~~~~~ 128 (132)
T 3l4f_D 103 RQVVNMIRQGGNTLMVKVVMVTRHPD 128 (132)
T ss_dssp HHHHHHHHHTTTEEEEEEECCCC---
T ss_pred HHHHHHHHcCCCEEEEEEEECCCCCC
Confidence 9999999644 889999987765443
No 56
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.24 E-value=3.7e-11 Score=121.39 Aligned_cols=95 Identities=23% Similarity=0.523 Sum_probs=80.1
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF 82 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d 82 (1613)
...|||.+++++ .++||+.|+||+++.|++|+++. ...|.+.|+|.++.+....+ .+++|+|.+.+++
T Consensus 6 ~~~G~L~K~g~~-----~~~Wk~R~fvL~~~~L~yy~~~~------~~~~~g~i~L~~~~v~~~~~-~~~~~~f~i~~~~ 73 (127)
T 1fgy_A 6 DREGWLLKLGGR-----VKTWKRRWFILTDNCLYYFEYTT------DKEPRGIIPLENLSIREVLD-PRKPNCFELYNPS 73 (127)
T ss_dssp SEEEEEEEECSS-----SCCEEEEEEEEETTEEEEESSTT------CSSCSEEEECTTCEEEEECC-SSCSSEEEEECSS
T ss_pred ceEeEEEEECCC-----CCCeEEEEEEEECCEEEEeCCCC------CCCcceEEECCceEEEEccC-CCCCceEEEecCC
Confidence 357999877554 36799999999999999999873 24678899999997766654 4899999999987
Q ss_pred C---------------------CeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 83 G---------------------DAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 83 g---------------------~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
+ +.|+|+|++++|++.||++|+.++..
T Consensus 74 ~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 121 (127)
T 1fgy_A 74 HKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR 121 (127)
T ss_dssp STTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 5 58999999999999999999998763
No 57
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.24 E-value=3.4e-11 Score=119.96 Aligned_cols=94 Identities=20% Similarity=0.506 Sum_probs=79.2
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCC--CCCCCCceEEEEcC
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIP--EHPKRDYIFCLSTA 81 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~--dy~KK~nVF~L~t~ 81 (1613)
..|||.++.+. .++||+.|+||++..|++|+++.. ..|.+.|+|.++.+.... +..+++|+|+|.++
T Consensus 10 ~~G~L~K~g~~-----~~~Wk~R~fvL~~~~L~yy~~~~~------~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~ 78 (118)
T 1v89_A 10 KMGWLKKQRSI-----VKNWQQRYFVLRAQQLYYYKDEED------TKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPA 78 (118)
T ss_dssp EEEEEEEECSS-----SSCEEEEEEEEETTEEEEESSSSC------CSCSEEECSTTEEEEEECCCSSCCCCCEEEEEES
T ss_pred EEEEEEecCCC-----CCCccEEEEEEECCEEEEEeCCCC------CCceEEEECCCCEEEEcCcCcccCCcceEEEECC
Confidence 57898887543 467999999999999999998742 467889999999876543 24567999999994
Q ss_pred -------CCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 82 -------FGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 82 -------dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
+++.|+|+|++++|++.||++|+.|+.
T Consensus 79 ~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 79 SWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp CCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 789999999999999999999999976
No 58
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.24 E-value=4.6e-11 Score=120.41 Aligned_cols=95 Identities=17% Similarity=0.278 Sum_probs=79.7
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCC--eEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEc
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGT--TLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLST 80 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~--~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t 80 (1613)
...|||.++.++. ..++||+.||||++. .|++||++.. ..|.+.|+|.++..... ..+++++|.|.+
T Consensus 9 ~~~G~L~K~g~~~---~~k~WkkRwfvL~~~~~~L~Yy~~~~~------~~~~g~I~L~~~~~~~~--~~~~~~~F~i~~ 77 (119)
T 2dhk_A 9 KLCGYLSKFGGKG---PIRGWKSRWFFYDERKCQLYYSRTAQD------ANPLDSIDLSSAVFDCK--ADAEEGIFEIKT 77 (119)
T ss_dssp CCEEEEEECSCSS---SSCCCEEEEEEEETTTTEEEEESSTTC------CSCSEEEEGGGCEEEEC--TTGGGCEEEEEC
T ss_pred cEEEEEEecCCCC---CCCCceeEEEEEECCccEEEEECCCCC------cccccEEECCCCEEEec--CCCCCCEEEEEe
Confidence 3579998886541 247899999999998 9999998743 36888999999877654 347789999999
Q ss_pred CCCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 81 AFGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 81 ~dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
+ ++.|+|+|++++|++.||++|+.|+..
T Consensus 78 ~-~r~~~l~a~s~~e~~~Wi~al~~~~~~ 105 (119)
T 2dhk_A 78 P-SRVITLKAATKQAMLYWLQQLQMKRWE 105 (119)
T ss_dssp S-SCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred C-CcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 8 789999999999999999999998764
No 59
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.24 E-value=1.9e-11 Score=127.94 Aligned_cols=101 Identities=22% Similarity=0.361 Sum_probs=83.6
Q ss_pred cccceEEecccccc-cccCCCceEEEEEEeCC-----eEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceE
Q psy8107 3 SVKKWLLRKKHQIE-LARKRGWKGYWVCLKGT-----TLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIF 76 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~-~~~~R~Wk~~~~vLkG~-----~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF 76 (1613)
...|||.++..+.. ....++||+.||||++. .|++||++.. ...|...|.|.+|......+ .+++|+|
T Consensus 19 ~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~-----~~~~~g~I~L~~~~~~~~~~-~~~~~~F 92 (150)
T 1wg7_A 19 TKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKI-----SKEPKGSIFLDSCMGVVQNN-KVRRFAF 92 (150)
T ss_dssp CCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCC-----SSCCSEEECTTTCCEECCCC-SSCTTEE
T ss_pred eEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCC-----CCCcCcEEecccCEEEecCC-CCCceEE
Confidence 36799988864321 12347899999999997 9999998742 24688899999998877644 5899999
Q ss_pred EEEcCCCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 77 CLSTAFGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 77 ~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
.|.+++++.|+|+|++++||+.||.+|+.|+..
T Consensus 93 ~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~ 125 (150)
T 1wg7_A 93 ELKMQDKSSYLLAADSEVEMEEWITILNKILQL 125 (150)
T ss_dssp EEECSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999774
No 60
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.24 E-value=2.1e-11 Score=123.74 Aligned_cols=97 Identities=14% Similarity=0.265 Sum_probs=78.6
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCC-CC-------CCce
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEH-PK-------RDYI 75 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy-~K-------K~nV 75 (1613)
..|||.+|.+. .++|++.|+||++..|++||++... .+..|.+.|.|.+|.+....+- .| +++.
T Consensus 8 k~G~L~Kk~~~-----~k~W~~rwfVL~~~~L~yyK~~~~~---~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~ 79 (120)
T 4a6h_A 8 KSGFLERRSKF-----LKSYSKGYYVLTPNFLHEFKTADRK---KDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAK 79 (120)
T ss_dssp EEEEEEEEETT-----TTEEEEEEEEECSSEEEEESSCCTT---TCCSCSEEEEGGGEEEEEECCCCC---------CCE
T ss_pred EEEEEEEcCCC-----CCCCccEEEEEeCCEEEEEcCCCcC---cCCCceEEEECCCCEEEEcccccccccccccCCCcE
Confidence 46899988653 3579999999999999999987432 2356889999999998885433 22 7889
Q ss_pred EEEEcCC------CCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 76 FCLSTAF------GDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 76 F~L~t~d------g~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
|.++..+ +..|.|+|++++||+.||++|+.++.
T Consensus 80 F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~~ 118 (120)
T 4a6h_A 80 FVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILTS 118 (120)
T ss_dssp EEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred EEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 9999888 35999999999999999999998854
No 61
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.24 E-value=4.3e-11 Score=115.77 Aligned_cols=86 Identities=15% Similarity=0.234 Sum_probs=74.1
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
.+++|+|.|.+...++||++.+ .. . ..+++|++|.|+|+|+++| |++||+|+.|||++|.++++.++..+++
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~--~~----~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 75 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVR--RT----D-EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQ 75 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEE--CS----S-SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEEEECCCCCcccEEEEe--cc----C-CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3578999997655899999987 22 1 2569999999999999999 9999999999999999999999999986
Q ss_pred cC-CeEEEEEeecCC
Q psy8107 434 EE-LSLCMMMRSSRT 447 (1613)
Q Consensus 434 ~~-~~l~L~vr~~~~ 447 (1613)
.. ..+.|+|+|.+.
T Consensus 76 ~~g~~v~l~v~R~~~ 90 (95)
T 2vwr_A 76 ASGERVNLTIARPGK 90 (95)
T ss_dssp HCCSEEEEEEEEESC
T ss_pred cCCCEEEEEEEcCCc
Confidence 44 899999998654
No 62
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.24 E-value=4.8e-11 Score=116.79 Aligned_cols=92 Identities=18% Similarity=0.325 Sum_probs=75.6
Q ss_pred ccceEEEEEEecCCCCccceEEEEeeccccc-ccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHH
Q psy8107 353 AKILYQVELQRTTLDHMWGFSVEAELTENAE-RQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLES 430 (1613)
Q Consensus 353 ~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~-~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ 430 (1613)
|...+.|+|.|.+ .+|||++.+ +.+.. .....+++|.+|.++|+|+++| |++||+|++|||++|.++++.++.+
T Consensus 5 ~~~~~~v~l~~~~--~~lG~~l~~--g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 80 (101)
T 2jik_A 5 LVTEEEINLTRGP--SGLGFNIVG--GTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVD 80 (101)
T ss_dssp GEEEEEEEEECCT--TCCCEEEEE--CTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHH
T ss_pred CCccEEEEEEeCC--CCCCEEEec--cccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4567889999966 899999998 22110 0112579999999999999999 9999999999999999999999999
Q ss_pred HHhc-CCeEEEEEeecCCC
Q psy8107 431 VLQE-ELSLCMMMRSSRTE 448 (1613)
Q Consensus 431 ll~~-~~~l~L~vr~~~~~ 448 (1613)
+++. +..+.|+|+|.+..
T Consensus 81 ~~~~~g~~v~l~v~R~~~~ 99 (101)
T 2jik_A 81 LFRNAGYAVSLRVQHRLES 99 (101)
T ss_dssp HHHTCCSEEEEEEEEESCC
T ss_pred HHHhCCCeEEEEEEeCCCC
Confidence 9964 37899999887654
No 63
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.24 E-value=3.9e-11 Score=114.14 Aligned_cols=83 Identities=18% Similarity=0.234 Sum_probs=71.2
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhh-cCCCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMH-NGLIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~-~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
.++.|+|.|.+. .+|||++.+ +.....+++|++|.|||+|++ +||++||+|++|||++|.++++.++..+++
T Consensus 2 ~~~~v~l~~~~~-~~lG~~i~~------~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~ 74 (87)
T 4e34_A 2 PIRKVLLLKEDH-EGLGISITG------GKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILS 74 (87)
T ss_dssp CCEEEEEECCTT-BCCCEEEEE------EGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHH
T ss_pred CEEEEEEEECCC-CcccEEEEc------cCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 368899999774 899999988 323335699999999999999 799999999999999999999999999996
Q ss_pred cC-CeEEEEEee
Q psy8107 434 EE-LSLCMMMRS 444 (1613)
Q Consensus 434 ~~-~~l~L~vr~ 444 (1613)
.. ..+.|+|+.
T Consensus 75 ~~~~~v~l~v~~ 86 (87)
T 4e34_A 75 QQRGEIEFEVVY 86 (87)
T ss_dssp HCCSEEEEEEEE
T ss_pred cCCCeEEEEEEE
Confidence 44 678888864
No 64
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.24 E-value=3.2e-11 Score=115.45 Aligned_cols=83 Identities=19% Similarity=0.303 Sum_probs=70.8
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
.++|+|.|.. .+|||++.+ +.....+++|.+|.|+|+|+++| |++||+|++|||++|.+.++.++.++++.
T Consensus 3 ~~~v~l~~~~--~g~G~~~~~------g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 74 (90)
T 2q9v_A 3 EQDIFLWRKE--TGFGFRILG------GNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQ 74 (90)
T ss_dssp EEEEEEECBT--TBCCEEEEE------CSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred cEEEEEEECC--CccCEEEEc------cccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4778898877 689999988 22222459999999999999999 99999999999999999999999999965
Q ss_pred C---CeEEEEEeecC
Q psy8107 435 E---LSLCMMMRSSR 446 (1613)
Q Consensus 435 ~---~~l~L~vr~~~ 446 (1613)
. ..+.|+|+|.+
T Consensus 75 ~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 75 AAKQGHVNLTVRQTR 89 (90)
T ss_dssp HHHHTEEEEEEEECC
T ss_pred CCCCCeEEEEEEecc
Confidence 4 37999998753
No 65
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.24 E-value=2.2e-11 Score=124.69 Aligned_cols=99 Identities=18% Similarity=0.274 Sum_probs=80.8
Q ss_pred eeecccceEEEEEEecCCCCccceEEEEeecccc---cccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCC
Q psy8107 349 VEVCAKILYQVELQRTTLDHMWGFSVEAELTENA---ERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLD 424 (1613)
Q Consensus 349 iEv~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~---~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~ 424 (1613)
++..|...+.|++.|.+..++|||+|.+.-.+.. +-.+..+++|++|.+||+|+++| |++||+|++|||++|.+.+
T Consensus 23 ~~~~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~ 102 (128)
T 1nf3_C 23 VDILPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKS 102 (128)
T ss_dssp CTTSCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCC
T ss_pred cccCCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC
Confidence 5678889999999998756899999987211100 00112479999999999999999 8999999999999999999
Q ss_pred HHHHHHHHhc-CCeEEEEEeecCC
Q psy8107 425 MMYLESVLQE-ELSLCMMMRSSRT 447 (1613)
Q Consensus 425 ~~~~~~ll~~-~~~l~L~vr~~~~ 447 (1613)
++++.++++. +..+.|+|+|.+.
T Consensus 103 ~~~~~~~l~~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 103 LDQVTDMMIANSRNLIITVRPANQ 126 (128)
T ss_dssp HHHHHHHHHHTTTSEEEEEECCCC
T ss_pred HHHHHHHHHcCCCeEEEEEEECCc
Confidence 9999999953 3779999988654
No 66
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.23 E-value=3.6e-11 Score=118.46 Aligned_cols=90 Identities=18% Similarity=0.200 Sum_probs=73.4
Q ss_pred cccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhc-CCCCCCEEEEEcCeecCCCCHHHHHH
Q psy8107 352 CAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHN-GLIKGDEIMVINGAIVSDLDMMYLES 430 (1613)
Q Consensus 352 ~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~-GL~~GDeIl~vNg~~v~~l~~~~~~~ 430 (1613)
.+..++.|++.|.+. ++|||++.+ +.....+++|++|.|+|+|+++ ||++||+|++|||++|.++++.++.+
T Consensus 6 ~~~~~~~v~l~~~~~-~~lG~~l~~------g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~ 78 (103)
T 2dc2_A 6 GVGPIRKVLLLKEDH-EGLGISITG------GKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVT 78 (103)
T ss_dssp ---CEEEEEEECCSS-SCCCEEEEE------EGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHH
T ss_pred CCCCcEEEEEEeCCC-CccCEEEEe------ccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 355678899999774 899999998 2222346899999999999995 99999999999999999999999999
Q ss_pred HHhcC-CeEEEEEeecCCC
Q psy8107 431 VLQEE-LSLCMMMRSSRTE 448 (1613)
Q Consensus 431 ll~~~-~~l~L~vr~~~~~ 448 (1613)
+++.. ..+.|+|.+....
T Consensus 79 ~l~~~~~~v~l~v~~~~~~ 97 (103)
T 2dc2_A 79 ILSQQRGEIEFEVVYVALE 97 (103)
T ss_dssp HHHHCCSEEEEEEEECC--
T ss_pred HHHhCCCcEEEEEEecCCc
Confidence 99654 7899998876543
No 67
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.23 E-value=3.1e-11 Score=121.09 Aligned_cols=95 Identities=24% Similarity=0.363 Sum_probs=77.3
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeC-CCCCCCCceEEEEcC
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPI-PEHPKRDYIFCLSTA 81 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a-~dy~KK~nVF~L~t~ 81 (1613)
-.||||.++..- ..+-+||++|+||++..|++|||+. +..+.+.|+|.+...... ....+|+|.|.|.++
T Consensus 13 irkGWL~k~~~g---~~k~~wk~rWFVLt~~~L~yyKd~~------eke~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~ 83 (125)
T 1dyn_A 13 IRKGWLTINNIG---IMKGGSKEYWFVLTAENLSWYKDDE------EKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNT 83 (125)
T ss_dssp EEEEEEEESCCC---GGGTSSEEEEEEEESSEEEEESSTT------CSCEEEEEECTTEEEEECCSCSSSSCEEEEEEET
T ss_pred EEEEEEEEecCc---cccCCceeeEEEEeccceeeecCCc------ccccceEEECCCceEeccCCCCCCCceEEEEECC
Confidence 368999876331 1223599999999999999999984 456788999998765444 444589999999999
Q ss_pred CCC-------eEEeecCCHHHHHHHHHHHHHH
Q psy8107 82 FGD-------AYLFQAPCQVELENWVNSIHSA 106 (1613)
Q Consensus 82 dg~-------~yLFQA~~~~em~~Wi~~I~~a 106 (1613)
||+ .|.+.|++++||++||.+|..|
T Consensus 84 d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 84 EQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp TSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred CCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 876 9999999999999999999877
No 68
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.23 E-value=2.2e-11 Score=118.96 Aligned_cols=94 Identities=16% Similarity=0.240 Sum_probs=78.3
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCCC
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAFG 83 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~dg 83 (1613)
++|||.++++. .++||+.||||+++.|++|+++... ...|.+.|+|.+|.+....+ +++.|.+.++++
T Consensus 1 ~eG~L~K~g~~-----~k~Wk~R~fvL~~~~L~Yy~~~~~~----~~~~~g~i~L~~~~v~~~~~---~~~~F~i~~~~~ 68 (103)
T 3rcp_A 1 MEGVLYKWTNY-----LTGWQPRWFVLDNGILSYYDSQDDV----CKGSKGSIKMAVCEIKVHSA---DNTRMELIIPGE 68 (103)
T ss_dssp CEEEEEEECCT-----TTCEEEEEEEEETTEEEEESSCC-------CCCSCEEEGGGCEEECCTT---CSSEEEEEETTT
T ss_pred CceEEEEccCC-----CCCeeceEEEEECCEEEEEecCCcc----cCCcccEEEeeeeEEEEcCC---CCceEEEEeCCC
Confidence 47999887653 3679999999999999999988532 23578899999888876543 589999999989
Q ss_pred CeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 84 DAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 84 ~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
+.|.|+|+|++|++.||++|+.|++.
T Consensus 69 r~~~l~a~s~~e~~~Wi~al~~a~~~ 94 (103)
T 3rcp_A 69 QHFYMKAVNAAERQRWLVALGSSKAS 94 (103)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988663
No 69
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.23 E-value=5.3e-11 Score=114.02 Aligned_cols=83 Identities=17% Similarity=0.260 Sum_probs=72.2
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
..+.|+|.|.. .+|||++.+ .. . ..+++|++|.|+|+|+++||++||+|++|||++|.+++++++.++++.
T Consensus 4 ~~r~v~l~k~~--~g~G~~~~~--~~----~-~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~ 74 (90)
T 2he4_A 4 RPRLCHLRKGP--QGYGFNLHS--DK----S-RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKA 74 (90)
T ss_dssp CCEEEEEECBT--TBCCEEEEE--CS----S-SSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTT
T ss_pred CcEEEEEEECC--CCccEEEEc--cC----C-CCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 35889999977 689999988 22 1 246999999999999999999999999999999999999999999975
Q ss_pred C-CeEEEEEeecC
Q psy8107 435 E-LSLCMMMRSSR 446 (1613)
Q Consensus 435 ~-~~l~L~vr~~~ 446 (1613)
. ..+.|+|.|.+
T Consensus 75 ~~~~v~l~v~r~~ 87 (90)
T 2he4_A 75 REDEARLLVVGPS 87 (90)
T ss_dssp SSSEEEEEEECCC
T ss_pred CCCcEEEEEEccC
Confidence 5 78999998754
No 70
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.23 E-value=3e-11 Score=123.88 Aligned_cols=94 Identities=20% Similarity=0.337 Sum_probs=72.6
Q ss_pred ccceEEecccccccccCCCceEEEEEE-eCCeEEEecCCCcCCCCCCCCCCceeEeCc-eE---------EeeCCCCCCC
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCL-KGTTLLFYPCDSREGRSVDAAPKHLIIVDG-AI---------MQPIPEHPKR 72 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vL-kG~~L~fyKd~~~~~~~~~~~p~~~I~l~~-~~---------~~~a~dy~KK 72 (1613)
.+|||.++.+ ..+.||+.|+|| ++..|++||++... .++..|.+.. +. ....++..+|
T Consensus 10 ~~G~L~K~g~-----~~k~WkkRwFVL~~~~~L~Yyk~~~~~------~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~ 78 (130)
T 2d9v_A 10 RGGWLWRQSS-----ILRRWKRNWFALWLDGTLGYYHDETAQ------DEEDRVVIHFNVRDIKVGQECQDVQPPEGRSR 78 (130)
T ss_dssp EEEEEEEECS-----SSCCEEEEEEEEETTTEEEEESSSSTT------SEEEEEECTTTEEEEEEGGGCSSCCCCSSCCT
T ss_pred EEEEEEeecC-----ccCCceeeEEEEccCCEEEEEeCCCCC------CcCceEecccceeEEeccccccccCCCCCCCc
Confidence 5799987744 246899999999 89999999987532 2333444432 11 1123466788
Q ss_pred CceEEEEcCCCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 73 DYIFCLSTAFGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 73 ~nVF~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
+|.|+|.+.+++.|+|+|++++||+.||++|+.|+.
T Consensus 79 ~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 79 DGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp TTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999998876
No 71
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.22 E-value=5e-11 Score=117.67 Aligned_cols=92 Identities=14% Similarity=0.295 Sum_probs=74.5
Q ss_pred ccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHH
Q psy8107 353 AKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESV 431 (1613)
Q Consensus 353 ~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~l 431 (1613)
|..+++|+|.|.+ ++|||++.+..+.. ..+...+++|.+|.|+|+|+++| |++||+|++|||++|.++++.++..+
T Consensus 1 ~e~~~~v~l~k~~--~glG~~i~gg~~~~-~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 77 (105)
T 2awx_A 1 MEKIMEIKLIKGP--KGLGFSIAGGVGNQ-HIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTA 77 (105)
T ss_dssp --CEEEEEEECBT--TBSSEEEEECBTSC-SBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHH
T ss_pred CCeEEEEEEEECC--CCCCEEEeCccCCC-CCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4567899999977 69999999822110 01122479999999999999999 99999999999999999999999999
Q ss_pred HhcC-CeEEEEEeecCC
Q psy8107 432 LQEE-LSLCMMMRSSRT 447 (1613)
Q Consensus 432 l~~~-~~l~L~vr~~~~ 447 (1613)
++.. ..+.|+|.|.+.
T Consensus 78 ~~~~~~~v~l~v~R~~~ 94 (105)
T 2awx_A 78 LKNTSDFVYLKVAKPTS 94 (105)
T ss_dssp HHSCCSEEEEEEECCCC
T ss_pred HHcCCCeEEEEEEcCCC
Confidence 9644 789999987654
No 72
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.22 E-value=2.8e-11 Score=122.65 Aligned_cols=96 Identities=17% Similarity=0.211 Sum_probs=72.0
Q ss_pred eeecccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhc-CCCCCCEEEEEcCeecCCCCHHH
Q psy8107 349 VEVCAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHN-GLIKGDEIMVINGAIVSDLDMMY 427 (1613)
Q Consensus 349 iEv~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~-GL~~GDeIl~vNg~~v~~l~~~~ 427 (1613)
+.-.+...+.|+|.|.+. ++|||++.+..... ....++||++|.|+|+|+++ ||++||+|++|||++|.++++.+
T Consensus 18 ~~s~~~~~~~v~l~k~~~-~~lGf~i~gg~~~~---~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~ 93 (120)
T 2iwo_A 18 LYFQSMGLRTVEMKKGPT-DSLGISIAGGVGSP---LGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQ 93 (120)
T ss_dssp -------CEEEEEEC-----CCCEEEEEEEEET---TEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHH
T ss_pred CCCCCCCcEEEEEEcCCC-CCCCEEEecccCCC---CCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHH
Confidence 344556789999999774 69999999832211 01246999999999999998 99999999999999999999999
Q ss_pred HHHHHhcC-CeEEEEEeecCCC
Q psy8107 428 LESVLQEE-LSLCMMMRSSRTE 448 (1613)
Q Consensus 428 ~~~ll~~~-~~l~L~vr~~~~~ 448 (1613)
+..+++.. ..++|+|+|.+..
T Consensus 94 ~~~~l~~~~~~v~l~v~r~g~~ 115 (120)
T 2iwo_A 94 AVNLLKNASGSIEMQVVAGGDV 115 (120)
T ss_dssp HHHHHHHCCSEEEEEEECCTTS
T ss_pred HHHHHHcCCCeEEEEEEECCcc
Confidence 99999654 6899999886643
No 73
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.22 E-value=7e-11 Score=112.42 Aligned_cols=83 Identities=19% Similarity=0.290 Sum_probs=69.9
Q ss_pred EEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC-C
Q psy8107 358 QVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE-L 436 (1613)
Q Consensus 358 ~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~-~ 436 (1613)
.+++++.+. ++|||++.+ +.....+++|.+|.|+|+|+++||++||+|+.|||+++.+++++++.++++.. .
T Consensus 3 ~~~v~~~~~-~~lG~~l~~------~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 75 (87)
T 2pa1_A 3 ALTVDVAGP-APWGFRITG------GRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSPS 75 (87)
T ss_dssp EEEEEECSS-SCCSEEEEE------EGGGTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCCS
T ss_pred EEEEEECCC-CccCEEEec------ccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 455555553 899999988 22223569999999999999999999999999999999999999999999655 7
Q ss_pred eEEEEEeecCC
Q psy8107 437 SLCMMMRSSRT 447 (1613)
Q Consensus 437 ~l~L~vr~~~~ 447 (1613)
.+.|+|+|.+.
T Consensus 76 ~v~l~v~R~~~ 86 (87)
T 2pa1_A 76 PLRLQLDRITS 86 (87)
T ss_dssp SEEEEEEECCC
T ss_pred eEEEEEEecCC
Confidence 89999998653
No 74
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.22 E-value=4.2e-11 Score=118.95 Aligned_cols=93 Identities=16% Similarity=0.207 Sum_probs=76.8
Q ss_pred eeeecccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHH
Q psy8107 348 VVEVCAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMM 426 (1613)
Q Consensus 348 ~iEv~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~ 426 (1613)
+...+...++.|+|.|.+ .+|||++.+ +.+...+...+++|.+|.|+|+|+++| |++||+|+.|||++|.+++++
T Consensus 8 ~~~~~~~~~~~v~l~k~~--~glG~~i~~--~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~ 83 (108)
T 2d92_A 8 ELALWSPEVKIVELVKDC--KGLGFSILD--YQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLA 83 (108)
T ss_dssp SCCSSCSSCEEEEEEECS--SCCSEEEEE--EECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHH
T ss_pred cccccCCceEEEEEEECC--CccCEEEec--ccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 344556678999999986 799999988 221111123679999999999999999 999999999999999999999
Q ss_pred HHHHHHhcC--CeEEEEEee
Q psy8107 427 YLESVLQEE--LSLCMMMRS 444 (1613)
Q Consensus 427 ~~~~ll~~~--~~l~L~vr~ 444 (1613)
++.++++.. ..+.|+|+|
T Consensus 84 ~~~~~l~~~~~~~v~l~v~R 103 (108)
T 2d92_A 84 EAVEILKAVPPGLVHLGICS 103 (108)
T ss_dssp HHHHHHHHSCSEEEEEEEEC
T ss_pred HHHHHHHhCCCCeEEEEEEc
Confidence 999999763 679999875
No 75
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.22 E-value=4.1e-11 Score=121.17 Aligned_cols=95 Identities=18% Similarity=0.242 Sum_probs=78.0
Q ss_pred eeeecccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHH
Q psy8107 348 VVEVCAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMM 426 (1613)
Q Consensus 348 ~iEv~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~ 426 (1613)
++-+-|...+.|++.|.+. ++|||++.+ +.+ ..+...++||++|.|||+|+++| |++||+|++|||++|.+++++
T Consensus 17 ~~~~~~~~~~~v~l~k~~~-~~lGf~i~g--g~~-~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~ 92 (118)
T 3b76_A 17 NLYFQSMHEKVVNIQKDPG-ESLGMTVAG--GAS-HREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRS 92 (118)
T ss_dssp -CCCEEEEEEEEEEECCTT-CCCCEEEEE--CSC-STTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHH
T ss_pred ccccCCCCcEEEEEEeCCC-CccCEEEec--CCC-CCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 3555667789999998764 899999998 221 11223569999999999999999 999999999999999999999
Q ss_pred HHHHHHhcC-CeEEEEEeecC
Q psy8107 427 YLESVLQEE-LSLCMMMRSSR 446 (1613)
Q Consensus 427 ~~~~ll~~~-~~l~L~vr~~~ 446 (1613)
++.++++.. ..+.|+|.|..
T Consensus 93 ~~~~~l~~~~~~v~L~v~R~~ 113 (118)
T 3b76_A 93 EAVALLKRTSSSIVLKALEVK 113 (118)
T ss_dssp HHHHHHHSCCSEEEEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEEEECC
Confidence 999999654 78999998754
No 76
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.22 E-value=7.1e-11 Score=112.53 Aligned_cols=82 Identities=20% Similarity=0.329 Sum_probs=69.0
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc-
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE- 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~- 434 (1613)
+.+|++ +.+ .+|||++.+ +.....+++|.+|.|+|+|+++||++||+|++|||++|.++++.++.++++.
T Consensus 4 ~~~v~l-~~~--~~~G~~l~~------g~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 74 (88)
T 2uzc_A 4 NYSVSL-VGP--APWGFRLQG------GKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGC 74 (88)
T ss_dssp EEEEEE-ESS--SCCCEEEEE------EGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred EEEEEE-cCC--CcccEEEEC------cCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 566777 333 789999988 3333356999999999999999999999999999999999999999999964
Q ss_pred CCeEEEEEeecC
Q psy8107 435 ELSLCMMMRSSR 446 (1613)
Q Consensus 435 ~~~l~L~vr~~~ 446 (1613)
+..+.|+|+|.+
T Consensus 75 g~~v~l~v~R~g 86 (88)
T 2uzc_A 75 TGSLNMTLQRES 86 (88)
T ss_dssp CSEEEEEEECCC
T ss_pred CCeEEEEEEeCC
Confidence 488999998754
No 77
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.21 E-value=6e-11 Score=113.99 Aligned_cols=84 Identities=19% Similarity=0.301 Sum_probs=72.2
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
.+++|+|.|.+. .++||++.+ .. +..+++|.+|.|+|+|+++| |++||+|++|||+++.++++.++..+++
T Consensus 4 ~~~~v~l~k~~~-~~lG~~~~~--~~-----~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 75 (92)
T 2qg1_A 4 DTLTIGLQKKPG-KGLGLSIVG--KR-----NDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLK 75 (92)
T ss_dssp CEEEEEEECCTT-SCCSEEEEC--CS-----SSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eEEEEEEEeCCC-CcccEEEEe--cc-----CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 468899999764 799999987 22 12569999999999999999 9999999999999999999999999986
Q ss_pred c-CCeEEEEEeecC
Q psy8107 434 E-ELSLCMMMRSSR 446 (1613)
Q Consensus 434 ~-~~~l~L~vr~~~ 446 (1613)
. +..+.|+|.|.+
T Consensus 76 ~~~~~v~l~v~R~~ 89 (92)
T 2qg1_A 76 CSLGTVTLEVGRIS 89 (92)
T ss_dssp HCCSEEEEEEECCC
T ss_pred cCCCeEEEEEEccc
Confidence 4 478999998765
No 78
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.21 E-value=5.7e-11 Score=118.83 Aligned_cols=87 Identities=24% Similarity=0.424 Sum_probs=72.6
Q ss_pred cccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHH
Q psy8107 352 CAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLES 430 (1613)
Q Consensus 352 ~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ 430 (1613)
-+...+.|++.|.. .+|||++.+ +.....+++|.+|.++|+|+++| |++||+|++|||++|.++++.++.+
T Consensus 21 ~~~~~~~v~l~~~~--~glG~~l~~------~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 92 (112)
T 2r4h_A 21 QSMDFYTVELERGA--KGFGFSLRG------GREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIE 92 (112)
T ss_dssp --CCEEEEEEECBT--TBTSEEEEE------CGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCceEEEEEEcCC--CccCEEEec------cccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 34556889998876 689999988 22223569999999999999999 9999999999999999999999999
Q ss_pred HHhc-CCeEEEEEeecC
Q psy8107 431 VLQE-ELSLCMMMRSSR 446 (1613)
Q Consensus 431 ll~~-~~~l~L~vr~~~ 446 (1613)
+++. +..+.|+|+|.+
T Consensus 93 ~l~~~g~~v~l~v~R~~ 109 (112)
T 2r4h_A 93 LIKNGGRRVRLFLKRGE 109 (112)
T ss_dssp HHHTTTTEEEEEEECCE
T ss_pred HHHcCCCeEEEEEEeCC
Confidence 9864 478999998754
No 79
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.21 E-value=4.9e-11 Score=116.63 Aligned_cols=89 Identities=31% Similarity=0.431 Sum_probs=77.2
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
.++.|+|.|.+. +.+||++.. . .....+++|.+|.|+|+|+++||++||+|+.|||++|.++++.++.+.++.
T Consensus 10 ~~~~v~l~~~~~-~~lG~~~~~--~----~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~ 82 (100)
T 2eeh_A 10 IIHSVRVEKSPA-GRLGFSVRG--G----SEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS 82 (100)
T ss_dssp EECCEEECCCSS-SSCSEEEEC--C----TTTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS
T ss_pred eEEEEEEEECCC-CCccEEEEc--c----ccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC
Confidence 457788988774 679999987 2 222356999999999999999999999999999999999999999999987
Q ss_pred CCeEEEEEeecCCCCC
Q psy8107 435 ELSLCMMMRSSRTEPP 450 (1613)
Q Consensus 435 ~~~l~L~vr~~~~~p~ 450 (1613)
+..+.|+|+|.+..|.
T Consensus 83 ~~~v~l~v~R~g~~p~ 98 (100)
T 2eeh_A 83 SSRLHMMVRRMGSGPS 98 (100)
T ss_dssp CSSEEEEEEECSCCCC
T ss_pred CCEEEEEEEECCcCCC
Confidence 8999999999887764
No 80
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.21 E-value=7.3e-11 Score=114.32 Aligned_cols=89 Identities=20% Similarity=0.331 Sum_probs=74.5
Q ss_pred ccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHH
Q psy8107 353 AKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESV 431 (1613)
Q Consensus 353 ~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~l 431 (1613)
|..+++|+|.|.+ .+|||++.+. .+. .....+++|++|.++|+|+++| |++||+|+.|||++|.++++.++.++
T Consensus 3 ~g~~~~v~l~k~~--~~lG~~i~~g--~~~-~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~ 77 (96)
T 1d5g_A 3 PGDIFEVELAKND--NSLGISVTGG--VNT-SVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 77 (96)
T ss_dssp TTCEEEEEEECSS--SSCCEEEECC--SSS-CSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCCEEEEEEEeCC--CCCCEEEECC--CCC-CCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 5678999999976 8999999872 211 1122579999999999999999 99999999999999999999999999
Q ss_pred HhcC-CeEEEEEeecC
Q psy8107 432 LQEE-LSLCMMMRSSR 446 (1613)
Q Consensus 432 l~~~-~~l~L~vr~~~ 446 (1613)
++.. ..+.|+|+|.+
T Consensus 78 l~~~g~~v~l~v~R~~ 93 (96)
T 1d5g_A 78 LRNTGQVVHLLLEKGQ 93 (96)
T ss_dssp HHSCCSEEEEEEECCS
T ss_pred HHcCCCeEEEEEEcCC
Confidence 9644 78999998754
No 81
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.21 E-value=6.4e-11 Score=117.67 Aligned_cols=95 Identities=18% Similarity=0.481 Sum_probs=80.0
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCce-EEeeCCCCCCCCceEEEEcC
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGA-IMQPIPEHPKRDYIFCLSTA 81 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~-~~~~a~dy~KK~nVF~L~t~ 81 (1613)
...|||.++.+. .++||+.|+||+++.|++|+++.. ..|...|.|.++ .++...+..+++|+|.+.++
T Consensus 9 ~~~G~L~K~~~~-----~~~Wk~R~fvL~~~~L~yy~~~~~------~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~ 77 (115)
T 2dn6_A 9 LKQGYMMKKGHR-----RKNWTERWFVLKPNIISYYVSEDL------KDKKGDILLDENCCVESLPDKDGKKCLFLVKCF 77 (115)
T ss_dssp SEEEEEEEECTT-----SSCEEEEEEEECSSCEEEESSTTC------SSEEEEECCCTTCEEEEECCCTTCCSEEEEECS
T ss_pred eEEEEEEecCCC-----CCCcEEeEEEEECCEEEEeCCCCC------cccCcEEEecCcEEEEECCCCCCCeeEEEEEeC
Confidence 357898877553 467999999999999999998732 356788999974 66677787889999999887
Q ss_pred CCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 82 FGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 82 dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
++.|+|+|++++|++.|+++|+.|+..
T Consensus 78 -~r~~~l~a~s~~e~~~Wi~ai~~~~~~ 104 (115)
T 2dn6_A 78 -DKTFEISASDKKKKQEWIQAIHSTIHL 104 (115)
T ss_dssp -SCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999885
No 82
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=6.1e-11 Score=117.43 Aligned_cols=94 Identities=17% Similarity=0.214 Sum_probs=75.3
Q ss_pred ceEEEEEEecCCCCccceEEEEeeccc--ccccCcceeEEEEecCCChhhhc-CCCCCCEEEEEcCeecCCCCHHHHHHH
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTEN--AERQDELCCYVSRVEDKSVAMHN-GLIKGDEIMVINGAIVSDLDMMYLESV 431 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~--~~~~~~~~~~Vs~V~~gg~A~~~-GL~~GDeIl~vNg~~v~~l~~~~~~~l 431 (1613)
.+++|+|.|. .++|||++.+..... ...+...++||++|.++|+|+++ ||++||+|++|||++|.++++.++.++
T Consensus 8 ~~~~v~l~k~--~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~ 85 (107)
T 1uhp_A 8 KSLTLVLHRD--SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEA 85 (107)
T ss_dssp EEEEEEECCS--SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHH
T ss_pred EEEEEEEEeC--CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4578999987 389999998721100 00112357999999999999999 999999999999999999999999999
Q ss_pred HhcC-CeEEEEEeecCCCCC
Q psy8107 432 LQEE-LSLCMMMRSSRTEPP 450 (1613)
Q Consensus 432 l~~~-~~l~L~vr~~~~~p~ 450 (1613)
++.. ..+.|+|.|.++.|+
T Consensus 86 ~~~~~~~v~l~v~R~~~~~~ 105 (107)
T 1uhp_A 86 FKTAKEPIVVQVLRRTSGPS 105 (107)
T ss_dssp HHHCCSSEEEEEEECCSSCS
T ss_pred HHcCCCcEEEEEEeCCCCCC
Confidence 9644 889999988766554
No 83
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=4.9e-11 Score=120.39 Aligned_cols=89 Identities=25% Similarity=0.357 Sum_probs=74.0
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
...+.|+|.|.. .+|||++.+.... .....+++|++|.|+|+|+++| |++||+|++|||++|.++++.++.+++
T Consensus 24 ~~~~~v~L~k~~--~glGf~l~~g~~~---~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 98 (117)
T 2fne_A 24 PQCKSITLERGP--DGLGFSIVGGYGS---PHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAIL 98 (117)
T ss_dssp CEEEEEEECCBT--TBTSEEEEEEEEE---TTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CccEEEEEEeCC--CcccEEEecccCC---CCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 456889999977 7899999983211 0112569999999999999999 999999999999999999999999999
Q ss_pred hcC-CeEEEEEeecCC
Q psy8107 433 QEE-LSLCMMMRSSRT 447 (1613)
Q Consensus 433 ~~~-~~l~L~vr~~~~ 447 (1613)
+.. ..+.|+|+|.+.
T Consensus 99 ~~~~~~v~l~v~R~g~ 114 (117)
T 2fne_A 99 KRTKGTVTLMVLSSDE 114 (117)
T ss_dssp HHCCSSEEEEEEECSC
T ss_pred HcCCCeEEEEEEeCCc
Confidence 643 679999988653
No 84
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.20 E-value=7.4e-11 Score=114.72 Aligned_cols=91 Identities=16% Similarity=0.266 Sum_probs=73.1
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
.++.|+|.|.+. .+|||++.+......+.....+++|++|.|+|+|+++| |++||+|+.|||++|.+.++.++.++++
T Consensus 5 ~~~~v~l~k~~~-~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 83 (98)
T 1ihj_A 5 LIHMVTLDKTGK-KSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIK 83 (98)
T ss_dssp EEEEEEEECTTS-SSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eEEEEEEEeCCC-CCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 468899999664 79999998722111000122479999999999999999 9999999999999999999999999995
Q ss_pred cC-CeEEEEEeecC
Q psy8107 434 EE-LSLCMMMRSSR 446 (1613)
Q Consensus 434 ~~-~~l~L~vr~~~ 446 (1613)
.. ..+.|+|+|.+
T Consensus 84 ~~g~~v~l~v~R~g 97 (98)
T 1ihj_A 84 EADFKIELEIQTFD 97 (98)
T ss_dssp HSCSEEEEEEEEC-
T ss_pred cCCCeEEEEEEeCC
Confidence 44 89999998864
No 85
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=2.8e-11 Score=119.10 Aligned_cols=85 Identities=19% Similarity=0.284 Sum_probs=72.2
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
+++|+|.|.. .+|||++.+ +.....+++|.+|.++|+|+++| |++||+|++|||++|.+++++++.++++.
T Consensus 10 ~~~v~l~~~~--~g~G~~i~~------g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~ 81 (103)
T 1uep_A 10 ELDVHLRRME--SGFGFRILG------GDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHH 81 (103)
T ss_dssp EECCEEESSS--SSCCEEECC------CCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred EEEEEEEeCC--CccCEEEee------ecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3667888854 789999987 22223568999999999999999 99999999999999999999999999965
Q ss_pred ---CCeEEEEEeecCCC
Q psy8107 435 ---ELSLCMMMRSSRTE 448 (1613)
Q Consensus 435 ---~~~l~L~vr~~~~~ 448 (1613)
+..+.|+|+|.+..
T Consensus 82 ~~~g~~v~l~v~R~~~~ 98 (103)
T 1uep_A 82 AARNGQVNLTVRRKVLS 98 (103)
T ss_dssp HHHHTEEEEEEEEECCC
T ss_pred CCCCCcEEEEEEeCCCC
Confidence 37999999987654
No 86
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.20 E-value=8.5e-11 Score=114.07 Aligned_cols=88 Identities=15% Similarity=0.294 Sum_probs=72.2
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
+.+|++.|.. .+|||++.+.... +.....+++|++|.|+|+|+++| |++||+|+.|||+++.+++++++.++++.
T Consensus 4 ~~~v~l~k~~--~~lG~~i~~~~~~--~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 79 (97)
T 2jil_A 4 TVEVTLHKEG--NTFGFVIRGGAHD--DRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ 79 (97)
T ss_dssp EEEEEEECBT--TBCSEEEEEECCS--CC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEEeCC--CccCEEEeCcccC--CCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4678888854 7999999882211 11223579999999999999999 99999999999999999999999999964
Q ss_pred -CCeEEEEEeecCC
Q psy8107 435 -ELSLCMMMRSSRT 447 (1613)
Q Consensus 435 -~~~l~L~vr~~~~ 447 (1613)
+..+.|+|+|.+.
T Consensus 80 ~g~~v~l~v~R~~~ 93 (97)
T 2jil_A 80 CGQEAALLIEYDVS 93 (97)
T ss_dssp SCSEEEEEEEEECC
T ss_pred CCCeEEEEEEeCCC
Confidence 4899999998654
No 87
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.20 E-value=8.2e-11 Score=111.38 Aligned_cols=80 Identities=16% Similarity=0.242 Sum_probs=67.8
Q ss_pred EEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc-
Q psy8107 357 YQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE- 434 (1613)
Q Consensus 357 ~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~- 434 (1613)
.+|++.|.. .+|||++.+ +.....+++|.+|.|+|+|+++| |++||+|++|||++|.++++.++.++++.
T Consensus 2 ~~v~l~k~~--~g~G~~i~~------~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 73 (85)
T 2i04_A 2 IHTKLRKSS--RGFGFTVVG------GDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSI 73 (85)
T ss_dssp EEEEEECBT--TBSSEEEEE------CCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred EEEEEEECC--CCCCEEEEc------ccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 467888866 689999988 22223569999999999999999 99999999999999999999999999965
Q ss_pred --CCeEEEEEee
Q psy8107 435 --ELSLCMMMRS 444 (1613)
Q Consensus 435 --~~~l~L~vr~ 444 (1613)
+..+.|+|.|
T Consensus 74 ~~g~~v~l~v~R 85 (85)
T 2i04_A 74 PIGASVDLELCR 85 (85)
T ss_dssp CTTCEEEEEEEC
T ss_pred CCCCeEEEEEEC
Confidence 3688888864
No 88
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.20 E-value=8.2e-11 Score=116.35 Aligned_cols=90 Identities=22% Similarity=0.243 Sum_probs=73.6
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccc--------cCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHH
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAER--------QDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMM 426 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~--------~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~ 426 (1613)
..+.|+|.|.. .+|||++.+. .+.++ ...+.+||.+|.|+|+|+++||++||+|++|||++|.+++++
T Consensus 6 ~~r~v~l~k~~--~g~G~~l~~~--~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~ 81 (107)
T 3qe1_A 6 SPRVVRIVKSE--SGYGFNVRGQ--VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHK 81 (107)
T ss_dssp CCEEEEEECBT--TBTCEEEECC--SSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHH
T ss_pred CcEEEEEEECC--CCCCEEEEcc--cccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH
Confidence 45889999987 5899999882 11111 112456899999999999999999999999999999999999
Q ss_pred HHHHHHhc-CCeEEEEEeecCCC
Q psy8107 427 YLESVLQE-ELSLCMMMRSSRTE 448 (1613)
Q Consensus 427 ~~~~ll~~-~~~l~L~vr~~~~~ 448 (1613)
++.++++. +..+.|+|.|....
T Consensus 82 ~~~~~l~~~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 82 QVVDLIRAGEKELILTVLSVESE 104 (107)
T ss_dssp HHHHHHHHCSSEEEEEEECSSCC
T ss_pred HHHHHHHcCCCEEEEEEEcCCCC
Confidence 99999965 48999999876543
No 89
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.20 E-value=5.8e-11 Score=117.42 Aligned_cols=88 Identities=19% Similarity=0.275 Sum_probs=73.4
Q ss_pred eecccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC--CCCCCEEEEEcCeecCCCCHHH
Q psy8107 350 EVCAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG--LIKGDEIMVINGAIVSDLDMMY 427 (1613)
Q Consensus 350 Ev~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G--L~~GDeIl~vNg~~v~~l~~~~ 427 (1613)
++-...++.|+|.|... ++|||.+.+ +.....+++|.+|.|+|+|+++| |++||+|++|||++|.++++.+
T Consensus 12 ~~~~~~~~~v~l~~~~~-~~~G~~~~g------g~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~ 84 (107)
T 3nfk_A 12 GIPHDNLVLIRMKPDEN-GRFGFNVKG------GYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQ 84 (107)
T ss_dssp ----CCCEEEEECCCTT-SCCCEEEEE------EGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHH
T ss_pred CCCCCCEEEEEEEcCCC-CCCCEEEEc------cCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHH
Confidence 44456789999999775 799999988 33333568999999999999999 9999999999999999999999
Q ss_pred HHHHHhcCC-----eEEEEEee
Q psy8107 428 LESVLQEEL-----SLCMMMRS 444 (1613)
Q Consensus 428 ~~~ll~~~~-----~l~L~vr~ 444 (1613)
+..+++... .+.|+|+|
T Consensus 85 ~~~~i~~~~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 85 VVLFIKASCERHSGELMLLVRP 106 (107)
T ss_dssp HHHHHHCGGGSBTTBEEEEEEC
T ss_pred HHHHHHhccccCCcEEEEEEEc
Confidence 999996553 89999986
No 90
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=6.5e-11 Score=113.29 Aligned_cols=82 Identities=27% Similarity=0.317 Sum_probs=69.8
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhh-cCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMH-NGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~-~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
++.|+|.|.+. +++||++.. .++ .+++|++|.|||+|++ +||++||+|++|||++|.+++++++.+++++
T Consensus 2 ~r~V~l~K~~~-~~lG~~i~~--~~~------~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~ 72 (88)
T 1kwa_A 2 SRLVQFQKNTD-EPMGITLKM--NEL------NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLRE 72 (88)
T ss_dssp CEEEEEEECSS-SCCCEEEEC--SCG------GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHH
T ss_pred eEEEEEEeCCC-CceeEEEEe--CCC------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 57899999864 789999987 211 2489999999999999 8999999999999999999999999999965
Q ss_pred C-CeEEEEEeecC
Q psy8107 435 E-LSLCMMMRSSR 446 (1613)
Q Consensus 435 ~-~~l~L~vr~~~ 446 (1613)
. .+++|+|.|.+
T Consensus 73 ~~~~v~l~v~r~~ 85 (88)
T 1kwa_A 73 MRGSITFKIVPSY 85 (88)
T ss_dssp CCEEEEEEEECCC
T ss_pred CCCcEEEEEECCc
Confidence 4 57888887643
No 91
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.20 E-value=7.6e-11 Score=113.70 Aligned_cols=84 Identities=18% Similarity=0.236 Sum_probs=70.8
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
+.++.|++.|.+ .++||++.. .+ ...+++|++|.+||+|+++| |++||+|++|||++|.+.+++++.+++
T Consensus 3 ~~~r~v~l~k~~--~~lG~~i~~--~~-----~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l 73 (93)
T 3o46_A 3 DSVKIIRLVKNR--EPLGATIKK--DE-----QTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQIL 73 (93)
T ss_dssp -CCEEEEEEESS--SCCCEEEEE--CT-----TTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHH
T ss_pred ccEEEEEEEeCC--CCccEEEEe--cC-----CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 356889999975 699999987 21 12458999999999999999 999999999999999999999999999
Q ss_pred hcC-CeEEEEEeecC
Q psy8107 433 QEE-LSLCMMMRSSR 446 (1613)
Q Consensus 433 ~~~-~~l~L~vr~~~ 446 (1613)
++. ..++|+|.+..
T Consensus 74 ~~~~~~v~l~v~~~~ 88 (93)
T 3o46_A 74 AQSQGAITFKIIPGS 88 (93)
T ss_dssp HHCCEEEEEEEECC-
T ss_pred HhCCCeEEEEEEeCC
Confidence 654 67888887543
No 92
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.20 E-value=1.1e-10 Score=114.36 Aligned_cols=90 Identities=18% Similarity=0.264 Sum_probs=74.0
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
++.|+|.|.. .+|||++.+..+.. ..+...+++|.+|.++|+|+++| |++||+|+.|||++|.++++.++..+++.
T Consensus 5 ~~~v~l~k~~--~glG~~i~~g~~~~-~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 81 (102)
T 2i1n_A 5 YEEIVLERGN--SGLGFSIAGGIDNP-HVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE 81 (102)
T ss_dssp EEEEEEECBT--TBTSEEEEECTTSC-SSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEEECC--CcCCEEEEcccCCC-CcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 5788998865 79999999821110 01123679999999999999999 99999999999999999999999999865
Q ss_pred C-CeEEEEEeecCCC
Q psy8107 435 E-LSLCMMMRSSRTE 448 (1613)
Q Consensus 435 ~-~~l~L~vr~~~~~ 448 (1613)
. ..+.|+|+|.+..
T Consensus 82 ~g~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 82 AGPVVRLVVRRRQPP 96 (102)
T ss_dssp SCSEEEEEEEEECCC
T ss_pred CCCeEEEEEEeCCCC
Confidence 4 8999999987654
No 93
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.19 E-value=8.3e-11 Score=116.87 Aligned_cols=92 Identities=20% Similarity=0.262 Sum_probs=73.8
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccc--------cCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHH
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAER--------QDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMM 426 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~--------~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~ 426 (1613)
..+.|+|.|.+. ++|||++.+ ..+.+. ....+++|.+|.++|+|+++||++||+|+.|||++|.++++.
T Consensus 7 ~~~~v~l~~~~~-~g~G~~l~~--~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~ 83 (109)
T 1q3o_A 7 KEKTVLLQKKDS-EGFGFVLRG--AKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHR 83 (109)
T ss_dssp EEEEEEEECCTT-SCCSEEEEE--SSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHH
T ss_pred CcEEEEEEECCC-CCCcEEEEe--ccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH
Confidence 357889988664 899999988 221000 001268999999999999999999999999999999999999
Q ss_pred HHHHHHhc-CCeEEEEEeecCCCC
Q psy8107 427 YLESVLQE-ELSLCMMMRSSRTEP 449 (1613)
Q Consensus 427 ~~~~ll~~-~~~l~L~vr~~~~~p 449 (1613)
++.++++. +..+.|+|.|..+.|
T Consensus 84 ~~~~~l~~~~~~v~l~v~~~~~~p 107 (109)
T 1q3o_A 84 QVVNMIRQGGNTLMVKVVMVTRHP 107 (109)
T ss_dssp HHHHHHHHTTTEEEEEEEEEECC-
T ss_pred HHHHHHHhCCCEEEEEEEECCCCC
Confidence 99999964 478999999877655
No 94
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.19 E-value=5.4e-11 Score=120.54 Aligned_cols=95 Identities=16% Similarity=0.333 Sum_probs=79.9
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF 82 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d 82 (1613)
...|||.++++ ..++||+.||||+++.|++|+++. ...|.+.|+|.++......+..+++|+|.|.++
T Consensus 19 ~~~G~L~K~g~-----~~~~Wk~R~fvL~~~~L~yy~~~~------~~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~- 86 (126)
T 1fao_A 19 TKEGYLTKQGG-----LVKTWKTRWFTLHRNELKYFKDQM------SPEPIRILDLTECSAVQFDYSQERVNCFCLVFP- 86 (126)
T ss_dssp CEEEEEEEECS-----SSCCEEEEEEEEETTEEEEESSTT------CSSCSEEEEGGGCCEEEEECSSSSSSEEEEEET-
T ss_pred cEEEEEEEcCC-----CCCCcccEEEEEECCEEEEeCCCC------CCCceeEEEccceEEEEecccCCCCCEEEEEeC-
Confidence 35788888754 246799999999999999999874 246888999999985555556689999999985
Q ss_pred CCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 83 GDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 83 g~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
++.|+|+|++++|++.|+.+|+.+++.
T Consensus 87 ~r~~~l~a~s~~e~~~Wi~al~~~i~~ 113 (126)
T 1fao_A 87 FRTFYLCAKTGVEADEWIKILRWKLSQ 113 (126)
T ss_dssp TEEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999874
No 95
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.19 E-value=4.5e-11 Score=118.82 Aligned_cols=88 Identities=14% Similarity=0.222 Sum_probs=73.6
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
.+++|+|.|.+. .+|||++.+... .+...++||++|.|+|+|+++| |++||+|++|||+++.+++++++.++++
T Consensus 5 ~~~~v~l~k~~~-~~lG~~i~g~~~----~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 79 (108)
T 3cbz_A 5 NIITVTLNMEKY-NFLGISIVGQSN----ERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLR 79 (108)
T ss_dssp CEEEEEECHHHH-CCCCEEEEEECS----STTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHH
T ss_pred eEEEEEEEeCCC-CccCEEEEcCcC----CCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 568899998654 789999998321 1223679999999999999999 9999999999999999999999999996
Q ss_pred cC----CeEEEEEeecCC
Q psy8107 434 EE----LSLCMMMRSSRT 447 (1613)
Q Consensus 434 ~~----~~l~L~vr~~~~ 447 (1613)
+. ..+.|+|+|.+.
T Consensus 80 ~~~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 80 DIVHKPGPIVLTVAKSGG 97 (108)
T ss_dssp HHHTSSSCEEEEEECCCC
T ss_pred hcccCCCeEEEEEEeCCC
Confidence 43 479999987654
No 96
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.19 E-value=1e-10 Score=111.81 Aligned_cols=82 Identities=20% Similarity=0.345 Sum_probs=67.9
Q ss_pred EEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc-C
Q psy8107 357 YQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE-E 435 (1613)
Q Consensus 357 ~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~-~ 435 (1613)
.+|++. . ..+|||++.+ +.....+++|.+|.|+|+|+++||++||+|++|||++|.++++.++.++++. +
T Consensus 5 ~~v~~~--~-~~~~G~~l~g------g~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 75 (89)
T 2q3g_A 5 FKVVLE--G-PAPWGFRLQG------GKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRACG 75 (89)
T ss_dssp EEEEEE--S-SSCCCEEEEE------EGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTCT
T ss_pred EEEEEc--C-CCcccEEEEC------cCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 445554 3 3789999987 2333356899999999999999999999999999999999999999999864 4
Q ss_pred CeEEEEEeecCC
Q psy8107 436 LSLCMMMRSSRT 447 (1613)
Q Consensus 436 ~~l~L~vr~~~~ 447 (1613)
..+.|+|+|.+.
T Consensus 76 ~~v~l~v~R~~~ 87 (89)
T 2q3g_A 76 ERLSLGLSRAIT 87 (89)
T ss_dssp TEEEEEEEEECC
T ss_pred CEEEEEEEeCCC
Confidence 789999987653
No 97
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.19 E-value=9.8e-11 Score=113.81 Aligned_cols=85 Identities=22% Similarity=0.311 Sum_probs=71.6
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
.+++|++.|.. +++||++.+ .+ ....+++|.+|.|+|+|+++| |++||+|+.|||++|.++++.++.++++
T Consensus 5 ~~~~v~l~~~~--~~lG~~i~~--~~----~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 76 (97)
T 1n7e_A 5 IIYTVELKRYG--GPLGITISG--TE----EPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQ 76 (97)
T ss_dssp CEEEEEEECTT--SCCCEEEEC--CS----STTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eEEEEEEEeCC--CCcCEEEEc--cc----CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 46789997754 789999987 22 222468999999999999999 9999999999999999999999999996
Q ss_pred c-CCeEEEEEeecCC
Q psy8107 434 E-ELSLCMMMRSSRT 447 (1613)
Q Consensus 434 ~-~~~l~L~vr~~~~ 447 (1613)
. +..+.|+|+|.+.
T Consensus 77 ~~g~~v~l~v~R~~~ 91 (97)
T 1n7e_A 77 MAGETVTLKIKKQTD 91 (97)
T ss_dssp TCCSEEEEEEECCCC
T ss_pred cCCCeEEEEEEeCCC
Confidence 3 3789999987654
No 98
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.19 E-value=9.8e-11 Score=113.50 Aligned_cols=87 Identities=16% Similarity=0.201 Sum_probs=74.0
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
..+.|+|.|.. .+|||++...- +.....+++|.+|.|+|+|+++||++||+|++|||++|.+++++++.++++.
T Consensus 3 ~~r~v~l~k~~--~~~G~~l~~~~----~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~ 76 (96)
T 2v90_A 3 KPRCLHLEKGP--QGFGFLLREEK----GLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQG 76 (96)
T ss_dssp CCEEEEEECBT--TBSCEEEEEEE----CTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CCEEEEEEeCC--CcccEEEEecc----CCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 35889999977 69999998832 1222357999999999999999999999999999999999999999999965
Q ss_pred -CCeEEEEEeecCC
Q psy8107 435 -ELSLCMMMRSSRT 447 (1613)
Q Consensus 435 -~~~l~L~vr~~~~ 447 (1613)
+..+.|+|.|.+.
T Consensus 77 ~g~~v~l~v~r~~~ 90 (96)
T 2v90_A 77 QGSCVSLTVVDPEA 90 (96)
T ss_dssp TTTEEEEEEECCCT
T ss_pred CCCEEEEEEECCCC
Confidence 4899999987654
No 99
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.19 E-value=1.1e-10 Score=112.55 Aligned_cols=89 Identities=16% Similarity=0.306 Sum_probs=72.3
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
.+++|+|.|.+ .+|||++.+..+.. ..+...+++|.+|.|+|+|+++| |++||+|+.|||++|.++++.++..+++
T Consensus 3 ~~~~v~l~k~~--~g~G~~i~gg~~~~-~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (94)
T 2fe5_A 3 TIMEVNLLKGP--KGLGFSIAGGIGNQ-HIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLK 79 (94)
T ss_dssp CEEEEEEECCT--TCSCEEEEECBTSC-SBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred EEEEEEEEECC--CCCCEEEEcccCCC-CCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45789999875 78999999832211 01123479999999999999999 9999999999999999999999999986
Q ss_pred cC-CeEEEEEeecC
Q psy8107 434 EE-LSLCMMMRSSR 446 (1613)
Q Consensus 434 ~~-~~l~L~vr~~~ 446 (1613)
.. ..+.|+|.|.+
T Consensus 80 ~~~~~v~l~v~R~g 93 (94)
T 2fe5_A 80 NTSDMVYLKVAKPG 93 (94)
T ss_dssp TCCSEEEEEEECCC
T ss_pred cCCCeEEEEEEcCC
Confidence 44 68899987653
No 100
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.18 E-value=1.1e-10 Score=113.24 Aligned_cols=89 Identities=21% Similarity=0.301 Sum_probs=71.1
Q ss_pred ceEEEEEEecCCCCccceEEEEeecc-cccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTE-NAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~-~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
..+.|+|.|.+. .+|||++.+.-.+ ..+.....+++|.+|.++|+|+++||++||+|++|||++|.+++++++.++++
T Consensus 4 ~~r~v~l~k~~~-~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~ 82 (96)
T 2ego_A 4 QRKVLTLEKGDN-QTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIK 82 (96)
T ss_dssp CEEEEEEECCTT-CCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ccEEEEEEeCCC-CCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 458899999874 7999999872111 01122235789999999999999999999999999999999999999999996
Q ss_pred cC-CeEEEEEee
Q psy8107 434 EE-LSLCMMMRS 444 (1613)
Q Consensus 434 ~~-~~l~L~vr~ 444 (1613)
.. ..+.|+|.+
T Consensus 83 ~~~~~v~l~v~~ 94 (96)
T 2ego_A 83 ASGNVLRLETLY 94 (96)
T ss_dssp HTTTEEEEEEEC
T ss_pred hCCCeEEEEEEE
Confidence 54 688888864
No 101
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.18 E-value=4.4e-11 Score=122.90 Aligned_cols=91 Identities=15% Similarity=0.269 Sum_probs=74.2
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhc-CCCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHN-GLIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~-GL~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
..+++|+|.|.. .+|||++.+ +.+... ....+||.+|.|||+|+++ ||++||+|++|||++|.+++++++.+++
T Consensus 28 ~~~~~v~l~k~~--~glG~~i~g--g~~~~~-~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l 102 (130)
T 1i16_A 28 ATVCTVTLEKMS--AGLGFSLEG--GKGSLH-GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNII 102 (130)
T ss_dssp EEEEEEEEETTS--SSTTEEEEC--CCCCSS-SCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHH
T ss_pred CcEEEEEEEcCC--CccCEEEec--CcCCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 456788998864 799999988 221000 1245999999999999999 9999999999999999999999999999
Q ss_pred hcC--CeEEEEEeecCCCC
Q psy8107 433 QEE--LSLCMMMRSSRTEP 449 (1613)
Q Consensus 433 ~~~--~~l~L~vr~~~~~p 449 (1613)
+.. ..+.|+|+|.+..+
T Consensus 103 ~~~~~~~v~l~v~r~~~~~ 121 (130)
T 1i16_A 103 KALPDGPVTIVIRRKSLQS 121 (130)
T ss_dssp HTSCSSEEEEEEEEESSCC
T ss_pred HhCCCceEEEEEEeCCCCC
Confidence 765 56999999875543
No 102
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.18 E-value=5.6e-11 Score=132.07 Aligned_cols=98 Identities=19% Similarity=0.347 Sum_probs=83.3
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCC---CCCCCCceEEEEc
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIP---EHPKRDYIFCLST 80 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~---dy~KK~nVF~L~t 80 (1613)
..|||.+++++.. ...++||+.||||+++.|++||++.. ..|.+.|.|.++.+...+ ...+|+|+|+|.+
T Consensus 108 k~G~L~Kkg~~~~-~~~k~WkkRwfVL~~~~L~Yyk~~~~------~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t 180 (211)
T 1u5e_A 108 KAGYLEKRRKDHS-FLGFEWQKRWCALSKTVFYYYGSDKD------KQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICA 180 (211)
T ss_dssp EEEEEEEEEHHHH-TTTCCCEEEEEEEETTEEEEESSTTC------SSCSEEEECTTCEEEECGGGCSSTTGGGEEEEEC
T ss_pred EEEEEEEECCCCC-cCCCCcEeEEEEEECCEEEEEcCCCC------ccceEEEEeCCcEEEEcCCccccCCCCCEEEEEc
Confidence 5789888866422 12578999999999999999998743 467889999999888764 3567899999999
Q ss_pred CCCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 81 AFGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 81 ~dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
++++.|+|+|++++|++.||.+|+.|+.
T Consensus 181 ~~~r~~~l~A~s~~e~~~Wi~aL~~ai~ 208 (211)
T 1u5e_A 181 PDKRIYQFTAASPKDAEEWVQQLKFILQ 208 (211)
T ss_dssp SSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999875
No 103
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.18 E-value=3e-11 Score=116.06 Aligned_cols=84 Identities=18% Similarity=0.224 Sum_probs=70.0
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
..+.|+|.|.+ .+|||++.. .. +..+++|++|.|+|+|+++||++||+|+.|||++|.+++++++.++++.
T Consensus 3 ~pr~v~l~k~~--~~~G~~l~~--~~-----~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~ 73 (91)
T 2vsp_A 3 KPKLCRLAKGE--NGYGFHLNA--IR-----GLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQS 73 (91)
T ss_dssp CEEEEEEECBT--TBTSCCCBC--CT-----TCSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTT
T ss_pred CcEEEEEEeCC--CcccEEEEe--cc-----CCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 46899999987 489999976 21 1245899999999999999999999999999999999999999999965
Q ss_pred -CCeEEEEEeecCC
Q psy8107 435 -ELSLCMMMRSSRT 447 (1613)
Q Consensus 435 -~~~l~L~vr~~~~ 447 (1613)
+..+.|+|.|.+.
T Consensus 74 ~g~~v~l~v~r~~~ 87 (91)
T 2vsp_A 74 SGKNVTLLVCGKKA 87 (91)
T ss_dssp SCSEEEEEEEC---
T ss_pred CCCEEEEEEEeCCc
Confidence 5899999987653
No 104
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.18 E-value=5.7e-11 Score=130.03 Aligned_cols=111 Identities=22% Similarity=0.230 Sum_probs=88.3
Q ss_pred cccCCCchhhHHHhhhccceeeecccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCC
Q psy8107 329 NYFVPPRGDLIETYLSTHEVVEVCAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIK 408 (1613)
Q Consensus 329 ~~~~p~~~~~~~~~~~~~~~iEv~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~ 408 (1613)
..++|...++-.+.. .+ -.+..++.|++.|.+. ++|||++.+ +.....+++|++|.|||+|+++||++
T Consensus 63 ~~~~~~~~~~~~~~~--~~---~~~~~~~~v~l~k~~~-~~lG~~i~~------~~~~~~~~~V~~V~~gspA~~aGL~~ 130 (192)
T 3k1r_A 63 RPLIPLKHQVEYDQL--TP---RRSRKLKEVRLDRLHP-EGLGLSVRG------GLEFGCGLFISHLIKGGQADSVGLQV 130 (192)
T ss_dssp GGGSCGGGHHHHHHH--SC---CCCSSCEEEEEETTST-TCCCEEEEE------EGGGTEEEEEEEECTTSHHHHTTCCT
T ss_pred hhccCcccccccccc--CC---CCCCceEEEEEEeCCC-CceeEEEEc------ccccCCCEEEEEECCCChHHHcCCCC
Confidence 344565554443332 12 2356789999999864 799999988 32233579999999999999999999
Q ss_pred CCEEEEEcCeecCCCCHHHHHHHHhcCCeEEEEEeecCCCCCC
Q psy8107 409 GDEIMVINGAIVSDLDMMYLESVLQEELSLCMMMRSSRTEPPE 451 (1613)
Q Consensus 409 GDeIl~vNg~~v~~l~~~~~~~ll~~~~~l~L~vr~~~~~p~~ 451 (1613)
||+|+.|||.+|.+++++++.++++.+..+.|+|+|.+..|..
T Consensus 131 GD~Il~vng~~v~~~~~~~~~~~l~~~~~v~l~v~r~g~~p~~ 173 (192)
T 3k1r_A 131 GDEIVRINGYSISSCTHEEVINLIRTEKTVSIKVRHIGLIPVK 173 (192)
T ss_dssp TEEEEEETTEECTTCCHHHHHHHHTSSSEEEEEEEECCEEEEC
T ss_pred CCEEEEECCEECCCCCHHHHHHHHcCCCeEEEEEEECCccCCC
Confidence 9999999999999999999999998789999999998776543
No 105
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.18 E-value=3.8e-11 Score=119.14 Aligned_cols=94 Identities=17% Similarity=0.335 Sum_probs=73.1
Q ss_pred cccceEEecccccccccCCCceEEEEEE-eCCeEEEecCCCcCCCCCCCCCCceeEeCceE--------Eee--CCCCCC
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCL-KGTTLLFYPCDSREGRSVDAAPKHLIIVDGAI--------MQP--IPEHPK 71 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vL-kG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~--------~~~--a~dy~K 71 (1613)
...|||.++++. .++||+.|||| +++.|++||++.. ..+...|.+.... +.. ..+..+
T Consensus 6 ~~~G~L~K~g~~-----~k~WkkR~fvL~~~~~L~yyk~~~~------~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~ 74 (112)
T 3aj4_A 6 VKSGWLLRQSTI-----LKRWKKNWFDLWSDGHLIYYDDQTR------QNIEDKVHMPMDCINIRTGQECRDTQPPDGKS 74 (112)
T ss_dssp SEEEEEEEECSS-----SCCEEEEEEEECTTSEEEEESSTTC------CSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCC
T ss_pred eEEEEEEeeCCC-----CCCeeceEEEEeeCCEEEEEcCCCC------CCCCccccccccceeecccccccccCCCCCCC
Confidence 357999887552 36799999999 8999999998743 2344556555432 222 345555
Q ss_pred CCceEEEEcCCCCeEEeecCCHHHHHHHHHHHHHHH
Q psy8107 72 RDYIFCLSTAFGDAYLFQAPCQVELENWVNSIHSAC 107 (1613)
Q Consensus 72 K~nVF~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aa 107 (1613)
++|+|.|.+++++.|+|+|+|++|++.||++|+.|.
T Consensus 75 ~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 75 KDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp GGGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 689999999999999999999999999999999874
No 106
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=8.3e-11 Score=118.65 Aligned_cols=95 Identities=15% Similarity=0.284 Sum_probs=76.6
Q ss_pred eeecccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHH
Q psy8107 349 VEVCAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMY 427 (1613)
Q Consensus 349 iEv~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~ 427 (1613)
+..-|...+.|++.|.. .+|||++.+..+.. ..+...+++|++|.+||+|+++| |++||+|++|||++|.++++.+
T Consensus 18 ~y~~~~~~~~v~l~k~~--~glG~~i~gg~~~~-~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~ 94 (117)
T 2byg_A 18 LYFQSMTVVEIKLFKGP--KGLGFSIAGGVGNQ-HIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEE 94 (117)
T ss_dssp --CEEEEEEEEEEECBT--TBSSEEEEECTTSC-SBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH
T ss_pred cccCCCceEEEEEEeCC--CCcCEEEEcccCCC-CccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 55566778999999875 79999999821110 01122469999999999999999 9999999999999999999999
Q ss_pred HHHHHhcC-CeEEEEEeecC
Q psy8107 428 LESVLQEE-LSLCMMMRSSR 446 (1613)
Q Consensus 428 ~~~ll~~~-~~l~L~vr~~~ 446 (1613)
+.++++.. ..+.|+|+|.+
T Consensus 95 ~~~~l~~~g~~v~l~v~R~~ 114 (117)
T 2byg_A 95 AVAILKNTSEVVYLKVGKPT 114 (117)
T ss_dssp HHHHHHTCCSEEEEEEEEEE
T ss_pred HHHHHHcCCCeEEEEEEeCC
Confidence 99999644 78999998864
No 107
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=5.7e-11 Score=119.74 Aligned_cols=95 Identities=19% Similarity=0.434 Sum_probs=79.1
Q ss_pred cccceEEecccccccccCCCceEEEEEEeC--CeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEc
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKG--TTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLST 80 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG--~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t 80 (1613)
...|||.++.+. .++||+.||||++ ..|++||++... ...|.+.|+|.++.+... .+++|+|.|.+
T Consensus 9 ~~~G~L~K~~~~-----~~~Wk~R~fvL~~~~~~L~Yyk~~~~~----~~~~~g~I~L~~~~v~~~---~~~~~~F~i~~ 76 (120)
T 2d9x_A 9 NVYGYLMKYTNL-----VTGWQYRFFVLNNEAGLLEYFVNEQSR----NQKPRGTLQLAGAVISPS---DEDSHTFTVNA 76 (120)
T ss_dssp CCEEEEEEEEET-----TTEEEEEEEEECTTTCEEEEESSGGGS----SSCCSEEEECTTCCEECC---SSSSSCEEECC
T ss_pred cEEEEEEecCCC-----CCCceEEEEEEECCCCEEEEEecCccc----CCCccceEEcceEEEEec---CCCCCEEEEEc
Confidence 367999887642 3679999999995 699999987532 235888999999876553 26789999999
Q ss_pred CCCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 81 AFGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 81 ~dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
++++.|+|+|++++|++.||++|+.|+..
T Consensus 77 ~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 105 (120)
T 2d9x_A 77 ASGEQYKLRATDAKERQHWVSRLQICTQH 105 (120)
T ss_dssp SSSCCEEECCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999875
No 108
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.18 E-value=6.6e-11 Score=113.87 Aligned_cols=84 Identities=27% Similarity=0.360 Sum_probs=71.2
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
..++|+|.|.. .+|||++.+ +.....+++|++|.|+|+|+++| |++||+|++|||++|.++++.++.++++
T Consensus 5 ~~r~v~l~k~~--~glG~~l~~------~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~ 76 (93)
T 2dkr_A 5 SSGVVELPKTD--EGLGFNIMG------GKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLK 76 (93)
T ss_dssp CSCEEEEECCT--TCCCEEEEC------SSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHH
T ss_pred CCEEEEEEeCC--CCccEEEec------ccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 46889999875 899999987 22223569999999999999996 9999999999999999999999999996
Q ss_pred cC-CeEEEEEeecC
Q psy8107 434 EE-LSLCMMMRSSR 446 (1613)
Q Consensus 434 ~~-~~l~L~vr~~~ 446 (1613)
.. ..+.|+|+|.+
T Consensus 77 ~~~~~v~l~v~r~~ 90 (93)
T 2dkr_A 77 AAQGSVKLVVRSGP 90 (93)
T ss_dssp HCCSEEEEEECCCC
T ss_pred hCCCcEEEEEEeCC
Confidence 44 68899987643
No 109
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.18 E-value=1.3e-10 Score=111.42 Aligned_cols=79 Identities=22% Similarity=0.317 Sum_probs=66.7
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE 435 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~ 435 (1613)
.++|+|.|.+ .+|||++.+ .. . ..+++|++|.|+|+|+++||++||+|++|||++|.++++.++.+++++.
T Consensus 4 ~r~v~l~r~~--~g~G~~~~~--~~----~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 74 (91)
T 1g9o_A 4 PRLCCLEKGP--NGYGFHLHG--EK----G-KLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA 74 (91)
T ss_dssp CEEEEEECBT--TBCCEEEEE--CT----T-CSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred cEEEEEEeCC--CcccEEEEe--cC----C-CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 5789999987 689999988 22 1 1469999999999999999999999999999999999999999999654
Q ss_pred -CeEEEEEe
Q psy8107 436 -LSLCMMMR 443 (1613)
Q Consensus 436 -~~l~L~vr 443 (1613)
..+.+.+.
T Consensus 75 ~~~~~~~~~ 83 (91)
T 1g9o_A 75 LNAVRLLVV 83 (91)
T ss_dssp SSEEEEEEE
T ss_pred CCcEEEEEE
Confidence 45555544
No 110
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.18 E-value=6.9e-11 Score=118.95 Aligned_cols=96 Identities=17% Similarity=0.188 Sum_probs=77.4
Q ss_pred cceEEEEEEecCCCCccceEEEEeeccc---ccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHH
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTEN---AERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLE 429 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~---~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~ 429 (1613)
..++.|+|.|.+. .+|||++.+..... ..+....+++|++|.++|+|+++| |++||+|++|||++|.++++.++.
T Consensus 14 ~~~~~v~l~k~~~-~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 92 (117)
T 2ehr_A 14 GPPRIVEIFREPN-VSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAV 92 (117)
T ss_dssp CCCEEEEECCCSS-SCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHH
T ss_pred CCCEEEEEEeCCC-CccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4678999999864 89999998721100 000123579999999999999999 999999999999999999999999
Q ss_pred HHHhcC-CeEEEEEeecCCCCC
Q psy8107 430 SVLQEE-LSLCMMMRSSRTEPP 450 (1613)
Q Consensus 430 ~ll~~~-~~l~L~vr~~~~~p~ 450 (1613)
.+++.. ..+.|+|.|.+..|.
T Consensus 93 ~~~~~~g~~v~l~v~r~~~~~~ 114 (117)
T 2ehr_A 93 EAIKNAGNPVVFIVQSLSSTPR 114 (117)
T ss_dssp HHHHTSCSSEEEEECCBSCCCC
T ss_pred HHHHcCCCeEEEEEEECCCCCc
Confidence 999654 889999988776543
No 111
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.18 E-value=6.5e-11 Score=120.34 Aligned_cols=95 Identities=19% Similarity=0.404 Sum_probs=77.8
Q ss_pred ccceEEecccccccccCCCceEEEEEEe--CCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCC-----CC---CC
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLK--GTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEH-----PK---RD 73 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLk--G~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy-----~K---K~ 73 (1613)
..|||.++.++ .+.||+.||||+ +..|++|+++. ....|...|+|.+|.+....+. .| ++
T Consensus 20 ~~G~L~K~g~~-----~~~Wk~R~fvL~~d~~~L~yy~~~~-----~~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~ 89 (129)
T 1x1g_A 20 KQGYLAKQGHK-----RKNWKVRRFVLRKDPAFLHYYDPSK-----EENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQG 89 (129)
T ss_dssp EEEEEEEECSS-----SSSEEEEEEEEEESSCEEEEECSSS-----CCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCS
T ss_pred EEEEEEEECCC-----CCCeeeEEEEEeCCCCeEEEeCCCC-----cCCccceEEECcCCEEEEeCCCCCcccccCCCCC
Confidence 57888877543 467999999999 57999999762 2346788999999876655433 13 78
Q ss_pred ceEEEEcCCCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 74 YIFCLSTAFGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 74 nVF~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
|+|+|.+++++.|+|+|++++|++.||++|+.|+.
T Consensus 90 ~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 90 NLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp SCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred ceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999865
No 112
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.17 E-value=8.8e-11 Score=116.99 Aligned_cols=90 Identities=13% Similarity=0.183 Sum_probs=74.5
Q ss_pred ecccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHH
Q psy8107 351 VCAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLE 429 (1613)
Q Consensus 351 v~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~ 429 (1613)
-.|...+.|++.|. .+|||++.+ +. +.++...+||.+|.++|+|+++| |++||+|++|||+++.+++++++.
T Consensus 11 ~~~~~~~~v~l~k~---~glG~~i~g--g~--~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~ 83 (109)
T 1wi4_A 11 DRDPAFRVITVTKE---TGLGLKILG--GI--NRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAK 83 (109)
T ss_dssp CCCTTEEEEEECCS---SCCCEEEEE--CS--SSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHH
T ss_pred CCCCcEEEEEEeCC---CccCEEEEe--cc--CCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 34567788999884 689999998 22 12233569999999999999999 999999999999999999999999
Q ss_pred HHHhcC-----CeEEEEEeecCC
Q psy8107 430 SVLQEE-----LSLCMMMRSSRT 447 (1613)
Q Consensus 430 ~ll~~~-----~~l~L~vr~~~~ 447 (1613)
++|+.. ..+.|.+.|.+.
T Consensus 84 ~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 84 SIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp HHHHHSCCSSSSCEEEEEECCCC
T ss_pred HHHHccccCCCceEEEEEEeCCC
Confidence 999543 578888887653
No 113
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.17 E-value=1.2e-10 Score=119.21 Aligned_cols=90 Identities=22% Similarity=0.300 Sum_probs=75.3
Q ss_pred ccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecC-CCCHHHHHH
Q psy8107 353 AKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVS-DLDMMYLES 430 (1613)
Q Consensus 353 ~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~-~l~~~~~~~ 430 (1613)
+..++.|++.|... ++|||+|.+.... .....++||.+|.++|+|+++| |++||+|++|||++|. ++++.++.+
T Consensus 23 ~~~~~~v~l~k~~~-~~lG~~i~g~~~~---~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~ 98 (128)
T 2db5_A 23 GRQIEYIDIERPST-GGLGFSVVALRSQ---NLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIA 98 (128)
T ss_dssp TCEEEEEEEECCSS-SCCCCEEEEEECS---SSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHH
T ss_pred cCceEEEEEEECCC-CccCEEEecccCC---CCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHH
Confidence 45678899999775 8999999882211 1122579999999999999999 9999999999999997 999999999
Q ss_pred HHhcC-CeEEEEEeecC
Q psy8107 431 VLQEE-LSLCMMMRSSR 446 (1613)
Q Consensus 431 ll~~~-~~l~L~vr~~~ 446 (1613)
+++.. ..+.|+|+|..
T Consensus 99 ~l~~~~~~v~l~v~r~~ 115 (128)
T 2db5_A 99 LLQQTTGSLRLIVAREP 115 (128)
T ss_dssp HHHHCCSEEEEEEEECC
T ss_pred HHHcCCCeEEEEEEcCC
Confidence 99644 88999998764
No 114
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.17 E-value=7.2e-11 Score=111.68 Aligned_cols=82 Identities=21% Similarity=0.409 Sum_probs=67.9
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc-
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE- 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~- 434 (1613)
++.|++.+ ..+|||++.+ +.....+++|++|.|+|+|+++||++||+|++|||++|.++++.++..+++.
T Consensus 2 ~~~v~l~~---~~~~G~~l~g------g~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 72 (85)
T 1rgw_A 2 AYSVTLTG---PGPWGFRLQG------GKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSA 72 (85)
T ss_dssp EEEEEECC---SSCCCEEECC------CGGGTSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTC
T ss_pred cEEEEEeC---CCccCEEEEe------ccCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcC
Confidence 46677742 2689999987 2333346899999999999999999999999999999999999999999964
Q ss_pred CCeEEEEEeecC
Q psy8107 435 ELSLCMMMRSSR 446 (1613)
Q Consensus 435 ~~~l~L~vr~~~ 446 (1613)
...+.|+|+|.+
T Consensus 73 ~~~v~l~v~R~~ 84 (85)
T 1rgw_A 73 SYNLSLTLQKSK 84 (85)
T ss_dssp SSCEEEEEESCC
T ss_pred CCeEEEEEEeCC
Confidence 367999998754
No 115
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.17 E-value=1.1e-10 Score=118.83 Aligned_cols=86 Identities=23% Similarity=0.340 Sum_probs=74.4
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
..+.|++.|... ++|||++.+ +.+...+++|++|.+||+|+++| |++||+|++|||++|.+++++++.++++
T Consensus 19 ~~~~v~l~k~~~-~~lG~~i~g------g~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~ 91 (125)
T 3hpk_A 19 VPGKVTLQKDAQ-NLIGISIGG------GAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQ 91 (125)
T ss_dssp EEEEEEEECCTT-SCCCEEEEE------CSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCeEEEEEeCCC-CCcCEEEec------cCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 467889999775 789999988 33334679999999999999999 9999999999999999999999999996
Q ss_pred cC-CeEEEEEeecCC
Q psy8107 434 EE-LSLCMMMRSSRT 447 (1613)
Q Consensus 434 ~~-~~l~L~vr~~~~ 447 (1613)
.. ..++|+|+|.+.
T Consensus 92 ~~~~~v~l~v~r~~~ 106 (125)
T 3hpk_A 92 EVKGEVTIHYNKLQA 106 (125)
T ss_dssp HSCSEEEEEEEEECS
T ss_pred cCCCeEEEEEEECCC
Confidence 54 679999987554
No 116
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=1.3e-10 Score=118.13 Aligned_cols=87 Identities=18% Similarity=0.255 Sum_probs=73.4
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
..++|++.|.. .+|||++.+ +.....+++|.+|.++|+|+++| |++||+|++|||++|.++++.++.++++
T Consensus 19 ~~~~v~l~~~~--~glG~~~~~------g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 90 (123)
T 1ueq_A 19 TFLSTTLKKSN--MGFGFTIIG------GDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQ 90 (123)
T ss_dssp EEEEEEEECCT--TSCSEEEEC------CSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred cEEEEEEEeCC--CceeEEEec------ccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45678888865 689999987 22223569999999999999999 9999999999999999999999999997
Q ss_pred c---CCeEEEEEeecCCCC
Q psy8107 434 E---ELSLCMMMRSSRTEP 449 (1613)
Q Consensus 434 ~---~~~l~L~vr~~~~~p 449 (1613)
. +..+.|+|.|....+
T Consensus 91 ~~~~g~~v~l~v~R~~~~~ 109 (123)
T 1ueq_A 91 SVPIGQSVNLVLCRGYPLP 109 (123)
T ss_dssp TSCTTCEEEEEEEESCCCC
T ss_pred hCCCCCeEEEEEEeCCCCC
Confidence 6 368999998865443
No 117
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.16 E-value=1.4e-10 Score=111.98 Aligned_cols=84 Identities=23% Similarity=0.421 Sum_probs=73.2
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
...+.|+|.|.. .+|||.+.. + .+++|.+|.|+|+|+++||++||+|++|||++|.++++.++.+.++
T Consensus 7 ~~~r~v~l~~~~--~~~G~~l~~------~----~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~ 74 (93)
T 2dls_A 7 GVQRCVIIQKDQ--HGFGFTVSG------D----RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK 74 (93)
T ss_dssp CCEEEEEEECSS--SSCCEEEEC------S----SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHT
T ss_pred CCCEEEEEEeCC--CceeEEEeC------C----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc
Confidence 356889998876 789999865 1 2489999999999999999999999999999999999999999998
Q ss_pred cCCeEEEEEeecCCCC
Q psy8107 434 EELSLCMMMRSSRTEP 449 (1613)
Q Consensus 434 ~~~~l~L~vr~~~~~p 449 (1613)
.+..+.|+|+|.++.+
T Consensus 75 ~g~~v~l~v~R~~~~~ 90 (93)
T 2dls_A 75 SGAYVALTLLGSSSGP 90 (93)
T ss_dssp SSSEEEEEEECCCCCS
T ss_pred CCCEEEEEEEECCCCC
Confidence 7799999999876543
No 118
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=8.7e-11 Score=118.57 Aligned_cols=88 Identities=19% Similarity=0.265 Sum_probs=74.6
Q ss_pred cccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhc--CCCCCCEEEEEcCeecCCCCHHHHH
Q psy8107 352 CAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHN--GLIKGDEIMVINGAIVSDLDMMYLE 429 (1613)
Q Consensus 352 ~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~--GL~~GDeIl~vNg~~v~~l~~~~~~ 429 (1613)
....++.|++.|.+. ++|||++.+ +.....+++|.+|.|+|+|+++ ||++||+|++|||++|.++++.++.
T Consensus 12 ~~~~~~~v~l~k~~~-~~~G~~l~g------g~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~ 84 (119)
T 2cs5_A 12 PHDNLVLIRMKPDEN-GRFGFNVKG------GYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVV 84 (119)
T ss_dssp CSSCCEEEEECCCSS-SCCSEEEEE------EGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHH
T ss_pred CCCCeEEEEEEeCCC-CCcCEEEec------ccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHH
Confidence 335678999999774 689999998 2222356999999999999999 9999999999999999999999999
Q ss_pred HHHhcC-----CeEEEEEeecC
Q psy8107 430 SVLQEE-----LSLCMMMRSSR 446 (1613)
Q Consensus 430 ~ll~~~-----~~l~L~vr~~~ 446 (1613)
++++.. ..+.|+|+|..
T Consensus 85 ~~~~~~~~~~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 85 LFIKASCERHSGELMLLVRPNA 106 (119)
T ss_dssp HHHHHHHHCCSSCEEEEEECCC
T ss_pred HHHHhccccCCCEEEEEEEccc
Confidence 999654 48999998753
No 119
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=1.7e-10 Score=116.38 Aligned_cols=88 Identities=18% Similarity=0.255 Sum_probs=73.9
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
..++.|+|.|... .++||.+... .+ ....+++|.+|.|+|+|+++| |++||+|++|||++|.+++++++.+++
T Consensus 14 ~~~~~v~l~k~~~-~~lG~~i~~~--~~---~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l 87 (117)
T 1v62_A 14 SGPLMVEIVKTPG-SALGISLTTT--SL---RNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLL 87 (117)
T ss_dssp SSSEEEEEECCTT-CCCCCEEEEE--CC---SSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHH
T ss_pred CCcEEEEEEcCCC-CcccEEEEcc--CC---CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4578899999774 7899999882 11 111349999999999999999 999999999999999999999999999
Q ss_pred hc-CCeEEEEEeecCC
Q psy8107 433 QE-ELSLCMMMRSSRT 447 (1613)
Q Consensus 433 ~~-~~~l~L~vr~~~~ 447 (1613)
++ +..+.|+|+|.+.
T Consensus 88 ~~~g~~v~l~v~r~~~ 103 (117)
T 1v62_A 88 ASISEKVRLEILPVPQ 103 (117)
T ss_dssp HSCSSEEEEEECCBTT
T ss_pred HhCCCeEEEEEEECCC
Confidence 64 3899999987654
No 120
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.16 E-value=1.2e-10 Score=112.45 Aligned_cols=85 Identities=18% Similarity=0.240 Sum_probs=71.1
Q ss_pred ccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 353 AKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 353 ~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
|...+.|+|.|.. ++|||.+.. .. . ..+++|..|.|+|+|+++||++||+|+.|||++|.+++++++.+++
T Consensus 3 p~~~r~v~l~~~~--~~~G~~l~~--~~----~-~~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 73 (95)
T 3r68_A 3 PHQPRVVVIKKGS--NGYGFYLRA--GP----E-QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMI 73 (95)
T ss_dssp CCCCEEEEEECBT--TBCSCEEEE--C-------CCSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCcEEEEEecCC--CcccEEEEe--cC----C-CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5667899999966 799999987 22 1 1358999999999999999999999999999999999999999999
Q ss_pred hcC-CeEEEEEeecC
Q psy8107 433 QEE-LSLCMMMRSSR 446 (1613)
Q Consensus 433 ~~~-~~l~L~vr~~~ 446 (1613)
+.. ..+.+.+.|..
T Consensus 74 ~~~~~~~~~~~~r~~ 88 (95)
T 3r68_A 74 RKGGDQTTLLVLDKE 88 (95)
T ss_dssp HTTTTEEEEEEEECC
T ss_pred HhCCCeEEEEEECCc
Confidence 654 66777766543
No 121
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=1.8e-10 Score=114.01 Aligned_cols=92 Identities=17% Similarity=0.317 Sum_probs=73.7
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
++.|+|.|.. .+|||++.+.....+......++||.+|.|+|+|+++| |++||+|+.|||++|.++++.++..+++.
T Consensus 10 ~~~v~l~k~~--~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 87 (107)
T 1wf8_A 10 LFPVELEKDE--DGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRN 87 (107)
T ss_dssp EEEEEEECBT--TBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHH
T ss_pred EEEEEEEECC--CcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 4778888875 68999998821111111123679999999999999999 99999999999999999999999999854
Q ss_pred -CCeEEEEEeecCCCC
Q psy8107 435 -ELSLCMMMRSSRTEP 449 (1613)
Q Consensus 435 -~~~l~L~vr~~~~~p 449 (1613)
+..+.|+|.|.+..+
T Consensus 88 ~~~~v~l~v~R~~~~~ 103 (107)
T 1wf8_A 88 TKGNVRFVIGREKPSG 103 (107)
T ss_dssp CCSEEEEEEEEECCCS
T ss_pred CCCeEEEEEEeCCCCC
Confidence 488999998876543
No 122
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.16 E-value=7.4e-11 Score=118.63 Aligned_cols=90 Identities=26% Similarity=0.358 Sum_probs=74.7
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecC-CCCHHHHHHH
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVS-DLDMMYLESV 431 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~-~l~~~~~~~l 431 (1613)
..++.|+|.|.+. ++|||++.+.... .....+++|.+|.|+|+|+++| |++||+|++|||++|. ++++.++.++
T Consensus 19 ~~~~~v~l~k~~~-~~lG~~i~~~~~~---~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~ 94 (117)
T 2o2t_A 19 RHVEVFELLKPPS-GGLGFSVVGLRSE---NRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISI 94 (117)
T ss_dssp SCEEEEEEECCSS-SCSSCCEEEEECC---C--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHH
T ss_pred CeEEEEEEEECCC-CCCCEEEeecccC---CCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHH
Confidence 4678999999764 8999999882211 1123579999999999999999 9999999999999998 9999999999
Q ss_pred HhcC-CeEEEEEeecCC
Q psy8107 432 LQEE-LSLCMMMRSSRT 447 (1613)
Q Consensus 432 l~~~-~~l~L~vr~~~~ 447 (1613)
++.. ..+.|+|+|.+.
T Consensus 95 l~~~~~~v~l~v~R~~~ 111 (117)
T 2o2t_A 95 LQKAKDTVQLVIARGSL 111 (117)
T ss_dssp HHHCCSEEEEEEESSCC
T ss_pred HHcCCCEEEEEEEeCCc
Confidence 9644 889999987653
No 123
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.16 E-value=2.9e-10 Score=116.60 Aligned_cols=88 Identities=16% Similarity=0.211 Sum_probs=74.0
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
...+|++.|.. .+|||++.+. .....+++|.+|.++|+|+++| |++||+|++|||++|.++++.++.++++
T Consensus 18 ~~~~v~l~~~~--~g~G~~i~g~------~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~ 89 (129)
T 2kpk_A 18 KFIHTKLRKSS--RGFGFTVVGG------DEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQ 89 (129)
T ss_dssp EEEEEEEEECS--SCCSEEEEEE------EETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred cEEEEEEEECC--CcccEEEeCc------cCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 44678888865 7999999882 2222569999999999999999 9999999999999999999999999996
Q ss_pred cC---CeEEEEEeecCCCCC
Q psy8107 434 EE---LSLCMMMRSSRTEPP 450 (1613)
Q Consensus 434 ~~---~~l~L~vr~~~~~p~ 450 (1613)
+. ..+.|+|+|....|.
T Consensus 90 ~~~~g~~v~l~v~R~~~~~~ 109 (129)
T 2kpk_A 90 SIPIGASVDLELCRGYPLPF 109 (129)
T ss_dssp HSCTTEEEEEEEEECSCCSS
T ss_pred hCCCCCeEEEEEEeCCCCCC
Confidence 53 679999998765544
No 124
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=1.5e-10 Score=116.61 Aligned_cols=94 Identities=13% Similarity=0.208 Sum_probs=75.1
Q ss_pred ccceEEEEEEecC-----CCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHH
Q psy8107 353 AKILYQVELQRTT-----LDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMM 426 (1613)
Q Consensus 353 ~~~~~~v~l~k~~-----~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~ 426 (1613)
|-.++.|++.|.. ...+|||+|.+..... ..+...+++|++|.|+|+|+++| |++||+|++|||++|.++++.
T Consensus 10 ~~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~-~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~ 88 (117)
T 1ujd_A 10 IFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIP-GHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYE 88 (117)
T ss_dssp SSCEEEEEECCCSSSSCSSCCSCSEEEEEEEECS-SSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHH
T ss_pred CCceEEEEEEecCcccCCCCCcccEEEeCCCCCC-cccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHH
Confidence 3455788898876 2379999998821110 01122479999999999999999 999999999999999999999
Q ss_pred HHHHHHhcC-CeEEEEEeecCC
Q psy8107 427 YLESVLQEE-LSLCMMMRSSRT 447 (1613)
Q Consensus 427 ~~~~ll~~~-~~l~L~vr~~~~ 447 (1613)
++.++++.. ..+.|+|+|.+.
T Consensus 89 ~~~~~l~~~~~~v~l~v~R~~~ 110 (117)
T 1ujd_A 89 EVQSIISQQSGEAEICVRLDLN 110 (117)
T ss_dssp HHHHHHSCCSSCEEEEEESSCC
T ss_pred HHHHHHhcCCCEEEEEEEECCc
Confidence 999999654 889999987654
No 125
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=1.5e-10 Score=111.25 Aligned_cols=80 Identities=16% Similarity=0.239 Sum_probs=69.2
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc-
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE- 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~- 434 (1613)
.++|+|.|.. ++|||.+.+ + .+++|.+|.++|+|+++||++||+|++|||++|.++++.++.++++.
T Consensus 4 ~r~v~l~~~~--~g~G~~l~~------~----~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 71 (91)
T 2f5y_A 4 YRQITIPRGK--DGFGFTICC------D----SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSC 71 (91)
T ss_dssp EEEEEEECBT--TBTSEEEEC------S----SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred eEEEEEEeCC--CCccEEEec------C----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 5789999876 689999976 1 23799999999999999999999999999999999999999999965
Q ss_pred CCeEEEEEeecCC
Q psy8107 435 ELSLCMMMRSSRT 447 (1613)
Q Consensus 435 ~~~l~L~vr~~~~ 447 (1613)
+..+.|+|.|.+.
T Consensus 72 ~~~v~l~v~R~~~ 84 (91)
T 2f5y_A 72 PSEIILLVWRMVP 84 (91)
T ss_dssp SSEEEEEEEECC-
T ss_pred CCeEEEEEEeCCC
Confidence 3789999987543
No 126
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=99.15 E-value=6.8e-12 Score=155.81 Aligned_cols=107 Identities=23% Similarity=0.380 Sum_probs=96.8
Q ss_pred ccchhhhHHHHHHhhhcccccccc-hhHHHHHHHHhhchhhHHHHHHHhheeEEeecCchhHHHHhhhccCCcccccccc
Q psy8107 766 EHLHLVGVVCLISFLVGLIFTTGA-GEYWLKLFDSFAGTIGLVLIALIEMLAVMFIYGHEKFTNDIYEMTGYKPGWYWQI 844 (1613)
Q Consensus 766 Eh~hL~~alclv~fLigLI~~T~g-G~yv~eL~D~y~a~~~ll~~al~E~i~i~WiyG~~rf~~di~~m~G~~~~~yWk~ 844 (1613)
.+...+..+|++.++++++++|++ | +|++|+|.+++.+++.+++|+++++|+||.+||++|+++|.|.+++.||+.
T Consensus 374 ~R~~~~~~v~~~~fllgl~~~~~~~g---~~~~D~~~~~~~l~~~~l~~~i~v~wv~g~~~~~~~i~~~~~~~~~~~w~~ 450 (519)
T 2a65_A 374 SRKHAVLWTAAIVFFSAHLVMFLNKS---LDEMDFWAGTIGVVFFGLTELIIFFWIFGADKAWEEINRGGIIKVPRIYYY 450 (519)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHBTTH---HHHHHHHTTTHHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCSSCCCTHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCC---cchHHHHHhHHHHHHHHHHHHHhhheeeehhHHHHHHHcccCCchHHHHHH
Confidence 466778889999999999999998 8 999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhHHhhhheeeec---cCCCccccc
Q psy8107 845 TWRFLGPAIMSCILVSSIICRF---LKKPSYSAW 875 (1613)
Q Consensus 845 cW~fItP~il~~I~i~~ii~~~---~~~P~Y~~~ 875 (1613)
||+|++|++++++++.+++... ++.|.|+.|
T Consensus 451 ~~~~v~P~~l~~i~~~~~~~~~~~~y~~y~~~~~ 484 (519)
T 2a65_A 451 VMRYITPAFLAVLLVVWAREYIPKIMEETHWTVW 484 (519)
T ss_dssp HHHTHHHHHHHHHHHHHHHHTHHHHHHSSCTTHH
T ss_pred eEEehHHHHHHHHHHHHHHhCcCCCCCCccCccH
Confidence 9999999999999999887643 233456655
No 127
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=9.4e-11 Score=115.63 Aligned_cols=88 Identities=15% Similarity=0.223 Sum_probs=73.5
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
.+.|++.|.. .+|||++.+ +.+. ..+.++|++|.|+|+|+++| |++||+|++|||+++.+++++|+.++|+.
T Consensus 7 ~~~v~l~k~~--~glG~~i~g--g~~~---~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 79 (103)
T 1ufx_A 7 GTLVRVKKSA--ATLGIAIEG--GANT---RQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAE 79 (103)
T ss_dssp SEEEEEECCS--SSCCEEEEC--BTTS---SCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHH
T ss_pred eEEEEEEcCC--CcCCeEEEC--CCCC---CCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHH
Confidence 5778887755 799999988 3221 12445999999999999999 99999999999999999999999999954
Q ss_pred ------CCeEEEEEeecCCCCC
Q psy8107 435 ------ELSLCMMMRSSRTEPP 450 (1613)
Q Consensus 435 ------~~~l~L~vr~~~~~p~ 450 (1613)
...+.+.|.|.+..|.
T Consensus 80 ~~~~~~~~~i~l~v~r~~~~~~ 101 (103)
T 1ufx_A 80 AFKTKDRDYIDFLVTEFNSGPS 101 (103)
T ss_dssp HHHCSSCSEEEEEECCCCCCTT
T ss_pred hcccCCCCeEEEEEEEcccCCC
Confidence 3789999988877664
No 128
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.15 E-value=1.8e-10 Score=113.13 Aligned_cols=86 Identities=17% Similarity=0.240 Sum_probs=74.1
Q ss_pred ecccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHH
Q psy8107 351 VCAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLE 429 (1613)
Q Consensus 351 v~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~ 429 (1613)
-.|..++.|+|.|.+ .+|||++.+ .. . ..+++|.+|.|+|+|+++| |++||+|+.|||++|.+.++.++.
T Consensus 7 ~~~~~~~~v~l~k~~--~glG~~~~~--~~----~-~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~ 77 (104)
T 3i4w_A 7 DIPREPRRIVIHRGS--TGLGFNIVG--GE----X-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAA 77 (104)
T ss_dssp CCCSSCEEEEEECBT--TBTSEEEEE--CC------CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHH
T ss_pred CCCCccEEEEEEeCC--CccCEEEEC--CC----C-CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 356678999999975 689999988 22 1 2469999999999999999 999999999999999999999999
Q ss_pred HHHhcC-CeEEEEEeec
Q psy8107 430 SVLQEE-LSLCMMMRSS 445 (1613)
Q Consensus 430 ~ll~~~-~~l~L~vr~~ 445 (1613)
.+++.. ..+.|+|+|.
T Consensus 78 ~~~~~~~~~v~l~v~r~ 94 (104)
T 3i4w_A 78 IALKNAGQTVTIIAQYK 94 (104)
T ss_dssp HHHHTSCSEEEEEEEEC
T ss_pred HHHHcCCCeEEEEEEEC
Confidence 998644 7899999875
No 129
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.14 E-value=8e-11 Score=118.74 Aligned_cols=95 Identities=17% Similarity=0.342 Sum_probs=78.0
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEe-eC--CCCCCCCceEEEE
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQ-PI--PEHPKRDYIFCLS 79 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~-~a--~dy~KK~nVF~L~ 79 (1613)
...|||.++++. .++||+.|+||+++.|++|+++.. ..+.+.|.|.++... .. .+..+++|+|.+.
T Consensus 15 ~~~G~L~K~g~~-----~~~Wk~R~fvL~~~~L~yy~~~~~------~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~ 83 (125)
T 1eaz_A 15 IKAGYCVKQGAV-----MKNWKRRYFQLDENTIGYFKSELE------KEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIV 83 (125)
T ss_dssp SEEEEEEEECTT-----TCCEEEEEEEECSSEEEEESSTTC------SSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEE
T ss_pred cEEEEEEEeCCC-----CCCcceEEEEEeCCEEEEEcCCCC------CcceeEEEcccceEEeeccccccCCcCCEEEEE
Confidence 357999877542 467999999999999999998742 457889999987533 32 2456889999999
Q ss_pred cCCCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 80 TAFGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 80 t~dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
++ ++.|+|+|++++|++.|+++|+.|+..
T Consensus 84 ~~-~r~~~l~a~s~~e~~~W~~al~~~i~~ 112 (125)
T 1eaz_A 84 TT-SRTFYVQADSPEEMHSWIKAVSGAIVA 112 (125)
T ss_dssp CS-SCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eC-CcEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 76 588999999999999999999999875
No 130
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.13 E-value=2.7e-10 Score=109.27 Aligned_cols=83 Identities=25% Similarity=0.316 Sum_probs=69.6
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc-
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE- 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~- 434 (1613)
+++|++.+ ..+|||++.+ +.....+++|.+|.|+|+|+++||++||.|++|||++|.+.++.++.++++.
T Consensus 4 ~~~v~~~~---~~~~G~~l~~------~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 74 (91)
T 2pkt_A 4 TQQIDLQG---PGPWGFRLVG------GKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGC 74 (91)
T ss_dssp EEEEEEES---SSCCSEEEEE------EGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred cEEEEECC---CCCCCEEEEc------cCCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45566653 2689999988 2222356999999999999999999999999999999999999999999964
Q ss_pred CCeEEEEEeecCC
Q psy8107 435 ELSLCMMMRSSRT 447 (1613)
Q Consensus 435 ~~~l~L~vr~~~~ 447 (1613)
+.++.|+|+|.+.
T Consensus 75 g~~v~l~v~R~g~ 87 (91)
T 2pkt_A 75 TDNLTLTVARSEH 87 (91)
T ss_dssp SSEEEEEEEEECC
T ss_pred CCeEEEEEEECCc
Confidence 4899999998764
No 131
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=2e-10 Score=116.16 Aligned_cols=91 Identities=19% Similarity=0.325 Sum_probs=74.6
Q ss_pred cceEEEEEEecCCCCccceEEEEeeccccc-ccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHH
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAE-RQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESV 431 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~-~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~l 431 (1613)
...+.|+|.|.+ .+|||++.+ +.+.. .....+++|.+|.++|+|+++| |++||+|++|||++|.++++.++..+
T Consensus 16 ~~~~~v~l~r~~--~~lG~~i~~--~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 91 (120)
T 2eno_A 16 VTEEEINLTRGP--SGLGFNIVG--GTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDL 91 (120)
T ss_dssp EEEEEEEEECCS--SSCSEEEEC--CTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHH
T ss_pred CceEEEEEEECC--CCCCEEEec--ccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 456889999977 899999988 22100 0013579999999999999999 99999999999999999999999999
Q ss_pred Hhc-CCeEEEEEeecCCC
Q psy8107 432 LQE-ELSLCMMMRSSRTE 448 (1613)
Q Consensus 432 l~~-~~~l~L~vr~~~~~ 448 (1613)
++. +..+.|+|+|....
T Consensus 92 ~~~~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 92 FRNAGYAVSLRVQHRLQV 109 (120)
T ss_dssp HHHHCSEEEEEEEEEEEC
T ss_pred HHcCCCeEEEEEEeCCcC
Confidence 954 47899999886543
No 132
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.13 E-value=3.3e-10 Score=110.07 Aligned_cols=86 Identities=16% Similarity=0.212 Sum_probs=72.1
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
..++|++.|.. .++||++.+ ..+. ...+++|.+|.|+|+|+++| |++||+|+.|||++|.++++.++.++++
T Consensus 4 ~~~~v~l~~~~--~~lG~~l~~--~~~~---~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 76 (98)
T 2opg_A 4 CETTIEISKGR--TGLGLSIVG--GSDT---LLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLR 76 (98)
T ss_dssp EEEEEEEECBT--TBTCEEEEE--CTTS---TTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CEEEEEEEECC--CcccEEEec--CCCC---CCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45788998875 789999988 2211 11369999999999999999 9999999999999999999999999996
Q ss_pred cC-CeEEEEEeecCC
Q psy8107 434 EE-LSLCMMMRSSRT 447 (1613)
Q Consensus 434 ~~-~~l~L~vr~~~~ 447 (1613)
.. ..+.|+|+|.+.
T Consensus 77 ~~~~~v~l~v~R~~~ 91 (98)
T 2opg_A 77 QTPQRVRLTLYRDEA 91 (98)
T ss_dssp TCCSEEEEEEEECSS
T ss_pred hCCCeEEEEEEcCCC
Confidence 44 789999988654
No 133
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.13 E-value=2.6e-10 Score=111.82 Aligned_cols=88 Identities=15% Similarity=0.161 Sum_probs=72.8
Q ss_pred ccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhh-cCCCCCCEEEEEcCeecCCCCHHHHHHH
Q psy8107 353 AKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMH-NGLIKGDEIMVINGAIVSDLDMMYLESV 431 (1613)
Q Consensus 353 ~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~-~GL~~GDeIl~vNg~~v~~l~~~~~~~l 431 (1613)
++..+.|++.|... .++||++.. .. .+...++++|.+|.++|+|++ +||++||+|++|||++|.+.+++++.++
T Consensus 7 ~~~~~~v~l~k~~g-~~lG~~i~~--~~--~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~ 81 (101)
T 2yt7_A 7 GDNCREVHLEKRRG-EGLGVALVE--SG--WGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAA 81 (101)
T ss_dssp TCCCEEEEEECCTT-CCCCEEEEE--CC--CSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHH
T ss_pred CCceEEEEEEeCCC-CccCEEEEe--CC--CCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45678899998775 699999975 11 122234689999999999999 6799999999999999999999999999
Q ss_pred Hhc---CCeEEEEEeec
Q psy8107 432 LQE---ELSLCMMMRSS 445 (1613)
Q Consensus 432 l~~---~~~l~L~vr~~ 445 (1613)
|++ +..+.|+|.|.
T Consensus 82 l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 82 VRETKSQTSVTLSIVHC 98 (101)
T ss_dssp HHHTTTSSEEEEEECCC
T ss_pred HHhCCCCCeEEEEEEeC
Confidence 964 37899998764
No 134
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=2e-10 Score=113.34 Aligned_cols=89 Identities=22% Similarity=0.329 Sum_probs=72.3
Q ss_pred ceEEEEEEecCCCCccceEEEEeeccccc--ccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHH
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAE--RQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESV 431 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~--~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~l 431 (1613)
..++|+|.|.. .+|||++.+ +.+.. .....+++|.+|.|+|+|+++| |++||+|++|||++|.++++.++.++
T Consensus 7 ~~~~v~l~~~~--~glG~~l~~--g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 82 (105)
T 1wha_A 7 GRHVACLARSE--RGLGFSIAG--GKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSL 82 (105)
T ss_dssp EEEEEEECCCT--TCCSCEEEC--CTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHH
T ss_pred eeEEEEEEeCC--CccCEEEEe--ccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45678888866 679999987 22100 0112569999999999999999 99999999999999999999999999
Q ss_pred Hhc-CCeEEEEEeecCC
Q psy8107 432 LQE-ELSLCMMMRSSRT 447 (1613)
Q Consensus 432 l~~-~~~l~L~vr~~~~ 447 (1613)
++. +..+.|+|.|.+.
T Consensus 83 l~~~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 83 LTAASPTIALLLEREAG 99 (105)
T ss_dssp HTSCCSCEEEEEEECCC
T ss_pred HHcCCCeEEEEEEECCC
Confidence 965 3789999988653
No 135
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.12 E-value=2.1e-10 Score=112.08 Aligned_cols=82 Identities=22% Similarity=0.391 Sum_probs=70.1
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
..+.|.|.|... +++||++.. .+ . .+++|++|.|||+|+++| |++||+|++|||++|.+++++++.++++
T Consensus 12 ~~~~v~l~K~~~-~~lG~~l~~--~~----~--~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~ 82 (97)
T 2ejy_A 12 MVRLIQFEKVTE-EPMGICLKL--NE----K--QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMK 82 (97)
T ss_dssp -CEEEEEEECSS-SCCSEEEEE--CT----T--CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHH
T ss_pred ccEEEEEEeCCC-CCeeEEEEe--CC----C--CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 357899999875 789999987 22 1 358999999999999999 9999999999999999999999999996
Q ss_pred cC-CeEEEEEeec
Q psy8107 434 EE-LSLCMMMRSS 445 (1613)
Q Consensus 434 ~~-~~l~L~vr~~ 445 (1613)
+. .++.|+|++.
T Consensus 83 ~~~~~v~L~V~~~ 95 (97)
T 2ejy_A 83 ETKGMISLKVIPN 95 (97)
T ss_dssp HCCEEEEEEEECC
T ss_pred cCCCeEEEEEEEC
Confidence 44 7888988753
No 136
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.12 E-value=2.5e-10 Score=117.45 Aligned_cols=90 Identities=22% Similarity=0.370 Sum_probs=70.9
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
+.++.+++.|.. ..+|||+|.+.... .....++||.+|.|||+|+++| |++||+|++|||++|.+++++++.+++
T Consensus 35 ~~~~~~~i~k~~-~~~lG~~i~gg~~~---~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l 110 (131)
T 1wfg_A 35 KRLKDGSVPRDS-GAMLGLKVVGGKMT---ESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNII 110 (131)
T ss_dssp CSCTTSCCCSCS-CTTTTEEEEEEEEC---SSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred ccceeEEEecCC-CCCCCEEEecCccC---CCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 333444555544 48999999872221 1112579999999999999999 999999999999999999999999999
Q ss_pred hcC---CeEEEEEeecCC
Q psy8107 433 QEE---LSLCMMMRSSRT 447 (1613)
Q Consensus 433 ~~~---~~l~L~vr~~~~ 447 (1613)
+.. ..+.|+|.|.+.
T Consensus 111 ~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 111 LESKPEPQVELVVSRSGP 128 (131)
T ss_dssp HHTSSSSEEEEEEEEECS
T ss_pred HhcCCCCEEEEEEEcCCC
Confidence 653 789999988654
No 137
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.11 E-value=2.9e-10 Score=121.42 Aligned_cols=100 Identities=15% Similarity=0.243 Sum_probs=78.8
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEE-eeCCC-----CCCCCceEE
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIM-QPIPE-----HPKRDYIFC 77 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~-~~a~d-----y~KK~nVF~ 77 (1613)
++|+|++|.+.+...+.++||+.|+||++..|++||++... ..+.+.|+|.++.. +.+.+ ..++++.|+
T Consensus 17 ~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~-----~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~ 91 (164)
T 2lul_A 17 LEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEK-----KYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQ 91 (164)
T ss_dssp EEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSS-----CCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEE
T ss_pred EEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCcc-----cccccEEEEeeeEEEEeccccccCcccccceeEE
Confidence 57999998764433566789999999999999999986432 34667899887643 33321 246789999
Q ss_pred EEcCCCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 78 LSTAFGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 78 L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
+.+++ +.|.|+|+|++|++.||++|+.++..
T Consensus 92 i~t~~-rt~~l~A~s~~e~~~Wi~aL~~~i~~ 122 (164)
T 2lul_A 92 VVHDA-NTLYIFAPSPQSRDLWVKKLKEEIKN 122 (164)
T ss_dssp EECSS-CEEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred EecCC-cEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 99987 67999999999999999999999874
No 138
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.11 E-value=2.1e-10 Score=112.50 Aligned_cols=83 Identities=18% Similarity=0.238 Sum_probs=71.8
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
..++|+|.|.. .+|||++.. .. +..+++|.+|.|+|+|+++||++||+|+.|||++|.++++.++.++++.
T Consensus 6 ~~r~v~l~k~~--~g~G~~l~~--~~-----~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~ 76 (102)
T 2d90_A 6 SGRVVVIKKGS--NGYGFYLRA--GP-----EQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK 76 (102)
T ss_dssp SSEEEEEECCS--SSSSCEEEE--CS-----SSSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHH
T ss_pred CCEEEEEeeCC--CCccEEEEe--ec-----CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 46889999976 699999988 22 1246999999999999999999999999999999999999999999965
Q ss_pred -CCeEEEEEeecC
Q psy8107 435 -ELSLCMMMRSSR 446 (1613)
Q Consensus 435 -~~~l~L~vr~~~ 446 (1613)
+..+.|+|+|.+
T Consensus 77 ~g~~v~l~v~r~~ 89 (102)
T 2d90_A 77 GGDQTTLLVLDKE 89 (102)
T ss_dssp STTEEEEEECSTT
T ss_pred CCCEEEEEEEECC
Confidence 588999997654
No 139
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.11 E-value=2.5e-10 Score=112.33 Aligned_cols=89 Identities=20% Similarity=0.253 Sum_probs=73.8
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
..+.|+|.|.. .+|||++.+ ..+. ....+++|.+|.|+|+|+++| |++||+|+.|||++|.++++.++.++++
T Consensus 11 ~~~~v~l~~~~--~g~G~~l~~--~~~~--~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 84 (104)
T 2djt_A 11 GHFSVELVRGY--AGFGLTLGG--GRDV--AGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIR 84 (104)
T ss_dssp CCEEEEEECCS--SSCCEEEEC--CEET--TEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEEeCC--CCccEEEEe--ccCC--CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45788888876 789999987 2211 112458999999999999999 9999999999999999999999999986
Q ss_pred c-CCeEEEEEeecCCCC
Q psy8107 434 E-ELSLCMMMRSSRTEP 449 (1613)
Q Consensus 434 ~-~~~l~L~vr~~~~~p 449 (1613)
. +..+.|+|+|.+..|
T Consensus 85 ~~g~~v~l~v~R~g~~~ 101 (104)
T 2djt_A 85 AGGPQLHLVIRRPLSGP 101 (104)
T ss_dssp HTCSEEEEEECCCCCCC
T ss_pred cCCCeEEEEEEECCCCC
Confidence 4 489999998876654
No 140
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=3.1e-10 Score=113.70 Aligned_cols=93 Identities=18% Similarity=0.254 Sum_probs=73.7
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccc-cccCcceeEEEEecCCChhhh-cCCCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENA-ERQDELCCYVSRVEDKSVAMH-NGLIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~-~~~~~~~~~Vs~V~~gg~A~~-~GL~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
..+.|.+.|.+. .+|||++.+...... +..-...++|.+|.|+|+|++ +||++||+|+.|||++|.+++++++.+++
T Consensus 10 ~~~~v~l~~~~~-~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l 88 (114)
T 1uew_A 10 QTSDVVIHRKEN-EGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLI 88 (114)
T ss_dssp CCEEEEEECCTT-SCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHH
T ss_pred cceEEEEEECCC-CCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 458899999765 799999987221110 111012469999999999999 99999999999999999999999999999
Q ss_pred hc-CCeEEEEEeecCCC
Q psy8107 433 QE-ELSLCMMMRSSRTE 448 (1613)
Q Consensus 433 ~~-~~~l~L~vr~~~~~ 448 (1613)
+. +..+.|+|+|.+..
T Consensus 89 ~~~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 89 KDAGLSVTLRIIPQEEL 105 (114)
T ss_dssp HHTTTEEEEEECCCSCC
T ss_pred HcCCCeEEEEEEeCCcC
Confidence 64 48999999876543
No 141
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.11 E-value=2.2e-10 Score=114.22 Aligned_cols=93 Identities=22% Similarity=0.322 Sum_probs=75.5
Q ss_pred ccceEEecccccccccCCCceEEEEEEe--CCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeC-------CCCCCCCc
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLK--GTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPI-------PEHPKRDY 74 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLk--G~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a-------~dy~KK~n 74 (1613)
..|||.++.+. .++||+.||||+ +..|++|+++.. ..|.+.|.|.++..... ++..+++|
T Consensus 10 ~~G~L~K~g~~-----~~~Wk~R~fvL~~~~~~L~yy~~~~~------~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~ 78 (117)
T 1v5u_A 10 YEGILYKKGAF-----MKPWKARWFVLDKTKHQLRYYDHRMD------TECKGVIDLAEVEAVAPGTPTIGAPKTVDEKA 78 (117)
T ss_dssp EEEEEEECCCS-----SSCCEEEEEEEETTTTEEEEESSSSC------SSCCCEEEGGGEEEEECCCCCTTSCSSSCTTT
T ss_pred EEEEEEecCCC-----CCCceeeEEEEECCCCEEEEeecCCC------CccceEEEccCcEEEeecCccccccccCCCCe
Confidence 57898887543 468999999999 889999998743 45788999998875543 23457789
Q ss_pred eEEEEcCCCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 75 IFCLSTAFGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 75 VF~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
+|.|.++ ++.|+|+|++++|++.||++|+.|+.
T Consensus 79 ~F~i~~~-~r~~~l~a~s~~e~~~Wi~al~~~i~ 111 (117)
T 1v5u_A 79 FFDVKTT-RRVYNFCAQDVPSAQQWVDRIQSCLS 111 (117)
T ss_dssp CEEEEES-SCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred EEEEECC-CceEEEECCCHHHHHHHHHHHHHHhc
Confidence 9999764 68999999999999999999997743
No 142
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.11 E-value=4.3e-10 Score=111.03 Aligned_cols=87 Identities=21% Similarity=0.304 Sum_probs=71.5
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
.+..|++ |.. .+|||++.+.... .....+++|++|.|+|+|+++| |++||+|++|||++|.++++.++..+++
T Consensus 11 ~~~~v~l-~~~--~glG~~i~~~~~~---~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~ 84 (106)
T 3axa_A 11 EIITVTL-KKQ--NGMGLSIVAAKGA---GQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMT 84 (106)
T ss_dssp CEEEEEE-ECS--SSCSEEEEEEECS---SCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eEEEEEE-CCC--CccCEEEEeecCC---CCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4467777 544 7899999873221 1233679999999999999999 9999999999999999999999999995
Q ss_pred cC-CeEEEEEeecCC
Q psy8107 434 EE-LSLCMMMRSSRT 447 (1613)
Q Consensus 434 ~~-~~l~L~vr~~~~ 447 (1613)
.. ..+.|+|.|.+.
T Consensus 85 ~~g~~v~l~v~R~~~ 99 (106)
T 3axa_A 85 RTSSVVTLEVAKQGA 99 (106)
T ss_dssp TCCSEEEEEEECCCS
T ss_pred cCCCeEEEEEEeCCc
Confidence 44 889999987654
No 143
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.11 E-value=2.4e-10 Score=116.30 Aligned_cols=94 Identities=16% Similarity=0.281 Sum_probs=78.1
Q ss_pred ceeeecccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCH
Q psy8107 347 EVVEVCAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDM 425 (1613)
Q Consensus 347 ~~iEv~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~ 425 (1613)
++....|..++.|+|.|.. .++||++.+ ..+ .. ..+++|.+|.|+|+|+++| |++||+|++|||++|.++++
T Consensus 17 ~~~~~~~~~~~~v~l~k~~--~glG~~l~~--~~~--~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~ 89 (124)
T 2daz_A 17 QRYADLPGELHIIELEKDK--NGLGLSLAG--NKD--RS-RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSH 89 (124)
T ss_dssp HHSTTSSSEEEEEEEECCS--SCCCEEEEC--BSS--TT-SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCH
T ss_pred HhhccCCCceEEEEEEeCC--CccCEEEec--cCC--CC-cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 3445667788999999975 799999987 221 11 2569999999999999999 99999999999999999999
Q ss_pred HHHHHHHhcC-CeEEEEEeecCC
Q psy8107 426 MYLESVLQEE-LSLCMMMRSSRT 447 (1613)
Q Consensus 426 ~~~~~ll~~~-~~l~L~vr~~~~ 447 (1613)
.++..+++.. ..+.|+|.|.+.
T Consensus 90 ~~~~~~~~~~~~~v~l~v~R~~~ 112 (124)
T 2daz_A 90 QNASAIIKTAPSKVKLVFIRNED 112 (124)
T ss_dssp HHHHHHHHHSCSEEEEEEEECTT
T ss_pred HHHHHHHHcCCCeEEEEEEeCCC
Confidence 9999998544 789999987643
No 144
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=6.7e-11 Score=117.90 Aligned_cols=94 Identities=16% Similarity=0.170 Sum_probs=75.0
Q ss_pred cccceEEEEEEecCCCCccceEEEEeeccccc---ccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHH
Q psy8107 352 CAKILYQVELQRTTLDHMWGFSVEAELTENAE---RQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMY 427 (1613)
Q Consensus 352 ~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~---~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~ 427 (1613)
+|...+.|+|.|... ++|||++.+......+ .+...+++|.+|.++|+|+++| |++||+|++|||++|.++++.+
T Consensus 6 ~~~~~~~v~l~k~~~-~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 84 (111)
T 1uju_A 6 SGPGLRELCIQKAPG-ERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGE 84 (111)
T ss_dssp CSCSSSCEEEECCTT-CCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHH
T ss_pred CCCccEEEEEEECCC-CccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 355678899998764 7999999882211000 0223579999999999999999 9999999999999999999999
Q ss_pred HHHHHhcC-CeEEEEEeecC
Q psy8107 428 LESVLQEE-LSLCMMMRSSR 446 (1613)
Q Consensus 428 ~~~ll~~~-~~l~L~vr~~~ 446 (1613)
+.++++.. ..+.|+|.|..
T Consensus 85 ~~~~l~~~g~~v~l~v~r~~ 104 (111)
T 1uju_A 85 AVQLLRSVGDTLTVLVCDGF 104 (111)
T ss_dssp HHHHHSSCSSEEEECCCCCC
T ss_pred HHHHHHcCCCeEEEEEEECC
Confidence 99999644 78999887644
No 145
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=3.9e-10 Score=112.14 Aligned_cols=88 Identities=19% Similarity=0.297 Sum_probs=73.5
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
..+++|+|.|.. .+|||++.+ +.+. .....+++|.+|.|+|+|+++| |++||+|++|||++|.++++.++..++
T Consensus 7 ~~~~~v~l~~~~--~glG~~l~~--g~~~-~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 81 (110)
T 1um1_A 7 GYVFTVELERGP--SGLGMGLID--GMHT-HLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLI 81 (110)
T ss_dssp CCEEEEEEECCT--TCCCEEEEE--TTTS-TTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHH
T ss_pred CcEEEEEEEECC--CccCEEEeC--CcCC-CCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 456889999876 689999988 2211 1123579999999999999999 999999999999999999999999999
Q ss_pred hcC-CeEEEEEeecC
Q psy8107 433 QEE-LSLCMMMRSSR 446 (1613)
Q Consensus 433 ~~~-~~l~L~vr~~~ 446 (1613)
+.. ..+.|+|.|.+
T Consensus 82 ~~~~~~v~l~v~R~~ 96 (110)
T 1um1_A 82 RHGGKKMRFLVAKSD 96 (110)
T ss_dssp HTCCSEEEEEEECCC
T ss_pred HcCCCeEEEEEEeCC
Confidence 644 78999998754
No 146
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.10 E-value=2.5e-10 Score=112.70 Aligned_cols=83 Identities=19% Similarity=0.329 Sum_probs=71.5
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc-
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE- 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~- 434 (1613)
.+.|+|.|.+. ..|||.+.. .. +..+++|.+|.|||+|+++||++||+|+.|||++|.+++++++.++++.
T Consensus 2 ~r~v~l~~~~~-~~~G~~l~~--~~-----~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 73 (106)
T 3ngh_A 2 PRESKLSKQEG-QNYGFFLRI--EK-----DTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKS 73 (106)
T ss_dssp CEEEEEECCTT-CCCCCEEEC--CT-----TCCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHHT
T ss_pred CEEEEEEeCCC-CeeCEEEEE--Ee-----CCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 57899999874 799999987 22 1245899999999999999999999999999999999999999999953
Q ss_pred CCeEEEEEeecC
Q psy8107 435 ELSLCMMMRSSR 446 (1613)
Q Consensus 435 ~~~l~L~vr~~~ 446 (1613)
+..+.|+|.|.+
T Consensus 74 g~~v~l~v~r~~ 85 (106)
T 3ngh_A 74 GNSVTLLVLDGD 85 (106)
T ss_dssp TTEEEEEEECHH
T ss_pred CCEEEEEEEECC
Confidence 489999998654
No 147
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.10 E-value=3.1e-10 Score=116.03 Aligned_cols=97 Identities=16% Similarity=0.277 Sum_probs=74.8
Q ss_pred cceEEecccccccccCCCceEEEEEEe---CCeEEEecCCCcCCCCCCCCCCceeEeCc-eEEeeCC--CCCCCCceEEE
Q psy8107 5 KKWLLRKKHQIELARKRGWKGYWVCLK---GTTLLFYPCDSREGRSVDAAPKHLIIVDG-AIMQPIP--EHPKRDYIFCL 78 (1613)
Q Consensus 5 Kg~L~~K~~k~~~~~~R~Wk~~~~vLk---G~~L~fyKd~~~~~~~~~~~p~~~I~l~~-~~~~~a~--dy~KK~nVF~L 78 (1613)
.|||.+++.. ..+.||+.||||+ |..||+||++... .....|.+.|.|.+ +.+..+. +..++++.|.+
T Consensus 18 ~G~L~K~g~~----~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~--~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i 91 (126)
T 1v5p_A 18 CGFLDIEDNE----NSGKFLRRYFILDTQANCLLWYMDNPQNL--AVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVI 91 (126)
T ss_dssp ECCEEEECTT----CSSCEEEEEEEEETTTTEEEEESSCTTTS--CTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEEE
T ss_pred EEEEEEeCCC----CCCCccceEEEEecCCCCEEEEECCCCCC--CCCceeeEEEECCCccEEecCCcccCCCCCEEEEE
Confidence 5888887532 2467999999999 7788888986331 23356888999998 3444442 45588899999
Q ss_pred EcCCCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 79 STAFGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 79 ~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
.+++ +.|+|+|+|++||+.||++|+.|+.
T Consensus 92 ~t~~-r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 92 NALS-QRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp ECSS-CEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred ECCC-EEEEEECCCHHHHHHHHHHHHHHHh
Confidence 8765 7899999999999999999998754
No 148
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.10 E-value=1.7e-10 Score=118.10 Aligned_cols=101 Identities=17% Similarity=0.289 Sum_probs=77.6
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceE---EeeCC-CCCCCCceEEE
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAI---MQPIP-EHPKRDYIFCL 78 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~---~~~a~-dy~KK~nVF~L 78 (1613)
...|||.++... ...++||++||||+++.|++||++... ....|.+.|+|.+|. ++.+. +..+|+|+|.|
T Consensus 6 ~~~G~L~K~~~~---~~~~~WkrRwfvL~~~~L~yyk~~~d~---~~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i 79 (134)
T 2y7b_A 6 EERGFLTIFEDV---SGFGAWHRRWCVLSGNCISYWTYPDDE---KRKNPIGRINLANCTSRQIEPANREFCARRNTFEL 79 (134)
T ss_dssp CEEEEEEEEEEE---TTEEEEEEEEEEEETTEEEEESSHHHH---TTSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEE
T ss_pred eEEeeEEEEcCC---CCCCCcEEEEEEEECCEEEEECCCCcc---cccCceEEEEhhhCccccccccchhhccCCCEEEE
Confidence 467999887321 123679999999999999999954221 234688899999987 44443 33689999999
Q ss_pred EcC--CC-----------------CeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 79 STA--FG-----------------DAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 79 ~t~--dg-----------------~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
.+. .. ..|+|+|++++||+.||.+|+.|++.
T Consensus 80 ~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 80 ITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp EEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 883 21 36999999999999999999998763
No 149
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.09 E-value=2.5e-10 Score=130.38 Aligned_cols=89 Identities=17% Similarity=0.257 Sum_probs=76.8
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhh-cCCCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMH-NGLIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~-~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
.++.|+|.|.+. ++|||+|.+ +..+..++||++|.+||+|++ +||++||+|++|||++|.++++.++..+++
T Consensus 77 ~~r~V~L~k~~~-~glGf~I~g------g~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~ 149 (263)
T 1z87_A 77 QRRRVTVRKADA-GGLGISIKG------GRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALK 149 (263)
T ss_dssp SSEEECCCTTTT-CCCCCEEEE------ETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHH
T ss_pred ccEEEEEEeCCC-CCEeEEEee------ccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 568999999764 899999998 333335799999999999999 899999999999999999999999999996
Q ss_pred cC-CeEEEEEeecCCCCC
Q psy8107 434 EE-LSLCMMMRSSRTEPP 450 (1613)
Q Consensus 434 ~~-~~l~L~vr~~~~~p~ 450 (1613)
+. ..+.|+|+|.+...+
T Consensus 150 ~~g~~V~L~V~R~~~~~~ 167 (263)
T 1z87_A 150 KTGKEVVLEVKYMKEVSP 167 (263)
T ss_dssp HCCSCCCEEEECCSSSSC
T ss_pred cCCCeEEEEEEeCccccc
Confidence 54 789999998765543
No 150
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.09 E-value=3.6e-10 Score=108.14 Aligned_cols=75 Identities=19% Similarity=0.395 Sum_probs=65.3
Q ss_pred EEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhcC-
Q psy8107 358 QVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQEE- 435 (1613)
Q Consensus 358 ~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~~- 435 (1613)
.|.+.|......|||.+.+ ++||++|.|||+|+++| |++||+|++|||+++.+++++++.+++++.
T Consensus 3 ~v~l~~~~~~~~~G~~~~~------------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~ 70 (88)
T 3e17_A 3 GVLLMKSRANEEYGLRLGS------------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSR 70 (88)
T ss_dssp EEEEECBTTBCCCCEEEEE------------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTT
T ss_pred EEEEEeCCCCCCCCEEEeC------------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4667776656799998855 38999999999999999 999999999999999999999999999655
Q ss_pred CeEEEEEee
Q psy8107 436 LSLCMMMRS 444 (1613)
Q Consensus 436 ~~l~L~vr~ 444 (1613)
.+++|++.+
T Consensus 71 ~~v~L~v~~ 79 (88)
T 3e17_A 71 GKLQLVVLR 79 (88)
T ss_dssp TEEEEEECC
T ss_pred CeEEEEEeC
Confidence 788888754
No 151
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.09 E-value=1.8e-10 Score=111.35 Aligned_cols=84 Identities=20% Similarity=0.281 Sum_probs=70.9
Q ss_pred EEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC-
Q psy8107 357 YQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE- 435 (1613)
Q Consensus 357 ~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~- 435 (1613)
.++++++.+. .+|||++.+ +.....+++|.+|.|+|+|+++||++||.|++|||++|.++++.++.++++..
T Consensus 6 ~~~~~~~~~~-~~lG~~l~~------g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 78 (94)
T 1vb7_A 6 SGLTVDVAGP-APWGFRISG------GRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSA 78 (94)
T ss_dssp CCEEEEECSS-SCCSBCCEE------ETTTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred EEEEEEecCC-CCccEEEec------ccCCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 3456666654 799999987 33333579999999999999999999999999999999999999999999654
Q ss_pred CeEEEEEeecCC
Q psy8107 436 LSLCMMMRSSRT 447 (1613)
Q Consensus 436 ~~l~L~vr~~~~ 447 (1613)
..+.|+|+|.+.
T Consensus 79 ~~v~l~v~R~g~ 90 (94)
T 1vb7_A 79 SPLRLQLDRSSG 90 (94)
T ss_dssp SSEEEEEECCCC
T ss_pred CcEEEEEEECCc
Confidence 889999998754
No 152
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.09 E-value=4.1e-10 Score=113.63 Aligned_cols=89 Identities=19% Similarity=0.237 Sum_probs=72.3
Q ss_pred ccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHH
Q psy8107 353 AKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESV 431 (1613)
Q Consensus 353 ~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~l 431 (1613)
+..++.|.+.|.+. .+|||++.+ +.+ . ...+++|.+|.|+|+|+++| |++||+|++|||++|.++++.++.++
T Consensus 13 ~~~~~~v~l~~~~~-~~lG~~i~g--~~~--~-~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~ 86 (119)
T 1x6d_A 13 LDGIHVTILHKEEG-AGLGFSLAG--GAD--L-ENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAI 86 (119)
T ss_dssp CTTEEEEEEECCTT-SCCSEEEEC--CSS--S-SCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHH
T ss_pred CCCeEEEEEEeCCC-CccCEEEeC--CCC--C-CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 44578888888764 899999987 221 1 12569999999999999999 99999999999999999999999999
Q ss_pred HhcC--CeEEEEEeecCC
Q psy8107 432 LQEE--LSLCMMMRSSRT 447 (1613)
Q Consensus 432 l~~~--~~l~L~vr~~~~ 447 (1613)
++.. ..+.++++|.+.
T Consensus 87 l~~~~~~~~~l~v~R~~~ 104 (119)
T 1x6d_A 87 LRQAREPRQAVIVTRKLT 104 (119)
T ss_dssp HHHTTSSSEEEEEEECCC
T ss_pred HHhCCCCeEEEEEEcCCC
Confidence 9543 556677777654
No 153
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.09 E-value=4.1e-10 Score=108.92 Aligned_cols=81 Identities=19% Similarity=0.241 Sum_probs=68.2
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
...+.|+|.|++ +++||++.. + +. ..+||++|.+||+|++.| |++||+|++|||++|.+++|.|+.++|
T Consensus 4 g~~k~V~l~K~~--~~LG~tI~~---~--g~---g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lL 73 (95)
T 3gge_A 4 GIEKEVNVYKSE--DSLGLTITD---N--GV---GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKL 73 (95)
T ss_dssp EEEEEEEEECCS--SCCCEEEEC---S--SS---SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CeEEEEEEEECC--CCceEEEEc---C--CC---CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHH
Confidence 356889999976 899999976 1 11 227999999999999976 899999999999999999999999999
Q ss_pred hcC---CeEEEEEee
Q psy8107 433 QEE---LSLCMMMRS 444 (1613)
Q Consensus 433 ~~~---~~l~L~vr~ 444 (1613)
++. .+++|++.+
T Consensus 74 k~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 74 KELKKEELFTMKLIE 88 (95)
T ss_dssp HHSCTTCEEEEEEEE
T ss_pred HhCCCCCEEEEEEEC
Confidence 875 568887753
No 154
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=2.3e-10 Score=113.45 Aligned_cols=90 Identities=20% Similarity=0.331 Sum_probs=74.0
Q ss_pred ccceEEEEEEecCCCCccceEEE-----EeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHH
Q psy8107 353 AKILYQVELQRTTLDHMWGFSVE-----AELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMM 426 (1613)
Q Consensus 353 ~~~~~~v~l~k~~~~~~~GF~v~-----~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~ 426 (1613)
|..+++|+|.|.+ .+|||++. + +.+. .....+++|++|.++|+|+++| |++||+|+.|||++|.++++.
T Consensus 7 ~~~~~~v~l~k~~--~~lG~~i~~~~~~g--g~~~-~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~ 81 (108)
T 1q7x_A 7 PGDIFEVELAKND--NSLGISVTVLFDKG--GVNT-SVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHK 81 (108)
T ss_dssp SSSEEEEEEESSS--CSCCEEESSSSSSB--CBCT-TSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTS
T ss_pred CCcEEEEEEEECC--CCccEEEEEeccCC--Cccc-cCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 4567889999876 78999998 4 1110 1122579999999999999999 999999999999999999999
Q ss_pred HHHHHHhcC-CeEEEEEeecCC
Q psy8107 427 YLESVLQEE-LSLCMMMRSSRT 447 (1613)
Q Consensus 427 ~~~~ll~~~-~~l~L~vr~~~~ 447 (1613)
++..+++.. ..+.|+|+|.+.
T Consensus 82 ~~~~~~~~~g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 82 QAVETLRNTGQVVHLLLEKGQS 103 (108)
T ss_dssp HHHHHHHHTTSEEEEEEECCCC
T ss_pred HHHHHHHcCCCeEEEEEEeCCc
Confidence 999999544 899999987543
No 155
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=6.8e-10 Score=110.91 Aligned_cols=97 Identities=18% Similarity=0.260 Sum_probs=75.3
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF 82 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d 82 (1613)
...|||.++.+. .+++||+.||||+++.|++||++.. .+...|.+.+|.+... +.++|+|.|.++
T Consensus 11 ~~~G~L~K~~~~----~~k~WkkR~fvL~~~~L~yyk~~~~-------~~~~~i~l~~~~v~~~---~~~~~~F~I~~~- 75 (114)
T 2da0_A 11 EKKGYLLKKSDG----IRKVWQRRKCSVKNGILTISHATSN-------RQPAKLNLLTCQVKPN---AEDKKSFDLISH- 75 (114)
T ss_dssp CEEEEEEEECSS----SCCCEEEEEEEEETTEEEECCSSCC-------SCCEEEETTTSEEEEC---SSSSSCEEEEET-
T ss_pred cEEEEEEEeCCC----CCCCceeEEEEEeCCEEEEEcCCCC-------CCCCEEEeeeeEEEEC---CCCCCEEEEEcC-
Confidence 357898887653 2368999999999999999998633 2334566666765533 246799999975
Q ss_pred CCeEEeecCCHHHHHHHHHHHHHHHHhhhhcc
Q psy8107 83 GDAYLFQAPCQVELENWVNSIHSACAAAFARH 114 (1613)
Q Consensus 83 g~~yLFQA~~~~em~~Wi~~I~~aaa~~~~r~ 114 (1613)
++.|+|+|+|++|++.||.+|+.|+.......
T Consensus 76 ~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~~ 107 (114)
T 2da0_A 76 NRTYHFQAEDEQDYVAWISVLTNSKEEALTMA 107 (114)
T ss_dssp TEEEEEECSSHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CcEEEEEcCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 68999999999999999999999987644433
No 156
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.08 E-value=3e-10 Score=109.76 Aligned_cols=84 Identities=24% Similarity=0.266 Sum_probs=69.2
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
.++.|++.+. .+|||.+.+ +.....+++|.+|.|+|+|+++||++||+|+.|||++|.++++.++..+++.
T Consensus 8 ~~~~v~l~~~---~~~G~~l~g------g~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~ 78 (94)
T 2eeg_A 8 MPHSVTLRGP---SPWGFRLVG------GRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKG 78 (94)
T ss_dssp CCEEEEECCS---SCCSCCEEC------CTTTTSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHT
T ss_pred ceEEEEEeCC---CccCEEEEC------ccCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3567777432 689999987 3333356899999999999999999999999999999999999999988864
Q ss_pred C-CeEEEEEeecCC
Q psy8107 435 E-LSLCMMMRSSRT 447 (1613)
Q Consensus 435 ~-~~l~L~vr~~~~ 447 (1613)
. ..+.|+|+|.+.
T Consensus 79 ~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 79 CHDHLTLSVSSGPS 92 (94)
T ss_dssp CCSCEEEEEECCSS
T ss_pred CCCeEEEEEEeCCC
Confidence 3 789999987543
No 157
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.07 E-value=6.4e-10 Score=111.66 Aligned_cols=88 Identities=23% Similarity=0.320 Sum_probs=72.4
Q ss_pred cccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHH
Q psy8107 352 CAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLES 430 (1613)
Q Consensus 352 ~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ 430 (1613)
.+...+.|++.|... +++||++.+ +.....+++|.+|.|||+|+++| |++||+|+.|||++|.+.+++++.+
T Consensus 21 q~~~~~~V~l~~~~~-~~lG~~l~~------~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~ 93 (114)
T 2gzv_A 21 QSMVPGKVTLQKDAQ-NLIGISIGG------GAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAK 93 (114)
T ss_dssp -CCCCEEEEEECCTT-SCCSEEEEE------CCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred ccCCCEEEEEEECCC-CcEeEEEEe------CCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 334568999999874 779999988 22323569999999999999999 9999999999999999999999999
Q ss_pred HHhcC-CeEEEEEeecC
Q psy8107 431 VLQEE-LSLCMMMRSSR 446 (1613)
Q Consensus 431 ll~~~-~~l~L~vr~~~ 446 (1613)
+++.. ..+.|+|++.+
T Consensus 94 ~l~~~~~~v~l~v~~~~ 110 (114)
T 2gzv_A 94 MIQEVKGEVTIHYNKLQ 110 (114)
T ss_dssp HHHHCCSEEEEEEECCC
T ss_pred HHHcCCCeEEEEEEecc
Confidence 99643 66888887644
No 158
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.07 E-value=6.6e-10 Score=111.24 Aligned_cols=84 Identities=23% Similarity=0.289 Sum_probs=72.9
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCC-CCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGL-IKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL-~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
..++.|+|.|... .++||.+.. +. .+++|.+|.++|+|+++|| ++||+|++|||++|.+++++++.+++
T Consensus 24 ~~~~~v~l~k~~~-~~lG~~i~~------~~---~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l 93 (113)
T 1va8_A 24 ETVKIVRIEKARD-IPLGATVRN------EM---DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLL 93 (113)
T ss_dssp EECEEEEEEECTT-CCCCEEEEE------CS---SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CceEEEEEEeCCC-CceeEEEEe------CC---CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4678999999873 599999987 21 3599999999999999999 99999999999999999999999999
Q ss_pred hcC-CeEEEEEeecCC
Q psy8107 433 QEE-LSLCMMMRSSRT 447 (1613)
Q Consensus 433 ~~~-~~l~L~vr~~~~ 447 (1613)
+.. ..+.|+|.|.+.
T Consensus 94 ~~~~~~v~l~v~r~~~ 109 (113)
T 1va8_A 94 SDMHGTLTFVLIPSSG 109 (113)
T ss_dssp HHCCEEEEEEEECCCC
T ss_pred HcCCCeEEEEEEECCc
Confidence 544 779999987654
No 159
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.07 E-value=1.3e-10 Score=109.63 Aligned_cols=78 Identities=24% Similarity=0.307 Sum_probs=68.3
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE 435 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~ 435 (1613)
.++|+|.|.. .+|||++.. + .+++|.+|.++|+|+++||++||+|++|||++|.++++.++.++++..
T Consensus 3 ~r~v~l~~~~--~g~G~~~~~------~----~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 70 (83)
T 2kv8_A 3 VRSVEVARGR--AGYGFTLSG------Q----APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKC 70 (83)
T ss_dssp EEEEEECCCS--SCCSCBCCC------S----SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTC
T ss_pred cEEEEEEeCC--CcccEEEEc------C----CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 5889999977 789998865 1 138999999999999999999999999999999999999999999644
Q ss_pred -CeEEEEEeec
Q psy8107 436 -LSLCMMMRSS 445 (1613)
Q Consensus 436 -~~l~L~vr~~ 445 (1613)
..+.|+|.|.
T Consensus 71 ~~~v~l~v~R~ 81 (83)
T 2kv8_A 71 SGVLHMVIAEG 81 (83)
T ss_dssp SSCEEEEEECC
T ss_pred CCeEEEEEEcC
Confidence 7799998764
No 160
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.07 E-value=4.8e-10 Score=110.23 Aligned_cols=85 Identities=18% Similarity=0.270 Sum_probs=70.0
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
.+..|+|. + ..+|||++.+ +......++|.+|.|+|+|+++||++||+|+.|||++|.++++.++..+++.
T Consensus 5 ~~~~v~l~--~-~~~~G~~l~g------g~~~~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~ 75 (103)
T 1wf7_A 5 SSGSVSLV--G-PAPWGFRLQG------GKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKA 75 (103)
T ss_dssp CCEEEEEE--S-SSCCSCCEEE------ETTTTEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHH
T ss_pred CEEEEEEe--C-CCccCEEEec------cccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45667776 2 3789999988 3333345899999999999999999999999999999999999999988854
Q ss_pred -CCeEEEEEeecCCC
Q psy8107 435 -ELSLCMMMRSSRTE 448 (1613)
Q Consensus 435 -~~~l~L~vr~~~~~ 448 (1613)
...+.|+|+|.+..
T Consensus 76 ~g~~v~l~v~R~g~~ 90 (103)
T 1wf7_A 76 CTGSLNMTLQRASAA 90 (103)
T ss_dssp CSSEEEEEECCCSCC
T ss_pred CCCeEEEEEEeCCCc
Confidence 47899999876543
No 161
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.07 E-value=5.5e-10 Score=106.43 Aligned_cols=82 Identities=20% Similarity=0.246 Sum_probs=67.7
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
.++.|+|.|.+ .++||++.. ..+ ..+++|+.| ++|+|+ +||++||+|+.|||++|.+++++++.++++.
T Consensus 3 ~~~~v~l~k~~--~g~G~~~~~--~~~-----~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~ 71 (88)
T 3bpu_A 3 ELITVHIVKGP--MGFGFTIAD--SPG-----GGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVE 71 (88)
T ss_dssp EEEEEEEECBT--TBSSCEEEE--CTT-----SSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHT
T ss_pred cEEEEEEEcCC--CceeEEEEe--cCC-----CCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 46889999976 799999987 221 245899998 999999 9999999999999999999999999999863
Q ss_pred ---CCeEEEEEeecCC
Q psy8107 435 ---ELSLCMMMRSSRT 447 (1613)
Q Consensus 435 ---~~~l~L~vr~~~~ 447 (1613)
+.++.|+|+|.+.
T Consensus 72 ~~~g~~v~l~v~R~g~ 87 (88)
T 3bpu_A 72 SPKGSEVTLLVQRQTR 87 (88)
T ss_dssp SCTTCEEEEEEEEECC
T ss_pred CCCCCEEEEEEEeCCc
Confidence 3789999988653
No 162
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.07 E-value=5.5e-10 Score=111.56 Aligned_cols=91 Identities=20% Similarity=0.321 Sum_probs=72.8
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
++.|+|.|.. .++||++.+.....+......+++|.+|.|+|+|+++| |++||.|+.|||++|.++++.++..+++.
T Consensus 5 ~~~v~l~k~~--~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (113)
T 2g5m_B 5 LFPVELEKDS--EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN 82 (113)
T ss_dssp EEEEECCCCS--SCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEEeCC--CCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 4677887765 79999998721111111123679999999999999999 99999999999999999999999999854
Q ss_pred C-CeEEEEEeecCCC
Q psy8107 435 E-LSLCMMMRSSRTE 448 (1613)
Q Consensus 435 ~-~~l~L~vr~~~~~ 448 (1613)
. ..+.|+|.|.+..
T Consensus 83 ~g~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 83 TKGRVRFMIGRERPG 97 (113)
T ss_dssp SCSSCEEEEEECCCC
T ss_pred CCCeEEEEEEeCCCC
Confidence 4 8899999887654
No 163
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=1.1e-09 Score=111.91 Aligned_cols=91 Identities=20% Similarity=0.218 Sum_probs=75.1
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
..+++++..... ..+||.+.. +.....+++|.+|.++|+|+++||++||.|+.|||++|.++++.++.+.++.
T Consensus 20 ~~~~v~v~~~~~-~~lG~~~~~------~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~ 92 (128)
T 1uf1_A 20 DEKKVNLVLGDG-RSLGLTIRG------GAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKS 92 (128)
T ss_dssp SEEEEEEECCSS-CCCCEEEEC------CTTTTCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHTT
T ss_pred cEEEEEEEECCC-CccCEEEEC------cccCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 345666665443 679999977 2222246999999999999999999999999999999999999999999987
Q ss_pred CCeEEEEEeecCCCCCCC
Q psy8107 435 ELSLCMMMRSSRTEPPET 452 (1613)
Q Consensus 435 ~~~l~L~vr~~~~~p~~~ 452 (1613)
+..+.|+|+|.+..+...
T Consensus 93 ~~~v~l~v~R~g~~~~~~ 110 (128)
T 1uf1_A 93 SRHLILTVKDVGRLPHAR 110 (128)
T ss_dssp CSEEEEEEECCSCCSSCS
T ss_pred CCeEEEEEEECCcccccc
Confidence 789999999988766543
No 164
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.06 E-value=4.2e-10 Score=114.24 Aligned_cols=93 Identities=18% Similarity=0.210 Sum_probs=75.5
Q ss_pred cccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHH
Q psy8107 352 CAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLES 430 (1613)
Q Consensus 352 ~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ 430 (1613)
+...++.|+|.|.+. .+|||++.....+. ......++|.+|.++|+|+++| |++||+|+.|||++|.+++++++.+
T Consensus 12 ~~~~~~~v~l~k~~~-~glG~~l~~~~~~~--~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~ 88 (122)
T 1v5q_A 12 VHTETTEVVLTADPV-TGFGIQLQGSVFAT--ETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQ 88 (122)
T ss_dssp CCEEEEEEEECCCSS-SSSCEEEECCSCCS--SSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHH
T ss_pred ccceeEEEEEEeCCC-CccCEEEecccccC--CcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 344678899988764 89999998721111 1122458999999999999999 9999999999999999999999999
Q ss_pred HHhcC---CeEEEEEeecCC
Q psy8107 431 VLQEE---LSLCMMMRSSRT 447 (1613)
Q Consensus 431 ll~~~---~~l~L~vr~~~~ 447 (1613)
+++.. ..+.|+|+|.+.
T Consensus 89 ~l~~~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 89 LLRDSSITSKVTLEIEFDVA 108 (122)
T ss_dssp HHHHHTTTTCEEEEEEEECC
T ss_pred HHHhCCCCCeEEEEEEECCc
Confidence 99543 589999998765
No 165
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.06 E-value=3.2e-10 Score=109.07 Aligned_cols=91 Identities=19% Similarity=0.380 Sum_probs=74.3
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF 82 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d 82 (1613)
+..|||.++.+. .++||+.||||+++.|++|+++.. ....|...|+|.++..... .+++|.|.+.++
T Consensus 2 ~k~G~L~K~g~~-----~k~WkkR~FvL~~~~L~Yy~~~~~----~~~~~~~~i~l~~~~~~~~---~~~~~~F~i~~~- 68 (94)
T 2rsg_A 2 ERCGVLSKWTNY-----IHGWQDRWVVLKNNALSYYKSEDE----TEYGCRGSICLSKAVITPH---DFDECRFDISVN- 68 (94)
T ss_dssp CEEEEEEEESSS-----TTCEEEEEEEEETTEEEEESSTTG----GGTCCSEEEETTTCEEEEC---SSCSSEEEEEET-
T ss_pred CEEEEEEEeCCC-----CCCceEEEEEEECCEEEEEEeccc----ccccceeeEecceeeeecC---cccceeEEEEeC-
Confidence 567898876543 367999999999999999998743 2345778899998876654 356899999986
Q ss_pred CCeEEeecCCHHHHHHHHHHHHHH
Q psy8107 83 GDAYLFQAPCQVELENWVNSIHSA 106 (1613)
Q Consensus 83 g~~yLFQA~~~~em~~Wi~~I~~a 106 (1613)
++.|.|+|+|++|++.||++|+.|
T Consensus 69 ~r~~~l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 69 DSVWYLRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp TEEEEEECCSSCCTHHHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHHHhh
Confidence 578999999999999999999876
No 166
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.06 E-value=5.3e-10 Score=110.72 Aligned_cols=81 Identities=15% Similarity=0.273 Sum_probs=66.1
Q ss_pred CCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhcC-CeEEEEEe
Q psy8107 366 LDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQEE-LSLCMMMR 443 (1613)
Q Consensus 366 ~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~~-~~l~L~vr 443 (1613)
...+|||++.+-++... .+...+++|.+|.|+|+|+++| |++||+|++|||++|.++++.++..+++.. .++.|+|+
T Consensus 11 ~~~~~Gf~i~gG~~~~~-~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~ 89 (106)
T 4amh_A 11 GSKGLGFSIAGGVGNQH-WPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKVA 89 (106)
T ss_dssp -CCCSCEEEEECTTSCS-BTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEEE
T ss_pred CCCccCEEEEeccCCcc-ccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEE
Confidence 34899999998332211 1122479999999999999999 999999999999999999999999999654 78999998
Q ss_pred ecCC
Q psy8107 444 SSRT 447 (1613)
Q Consensus 444 ~~~~ 447 (1613)
|.+.
T Consensus 90 R~~~ 93 (106)
T 4amh_A 90 KPGS 93 (106)
T ss_dssp CCSS
T ss_pred eCCC
Confidence 8654
No 167
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.06 E-value=2.3e-10 Score=112.93 Aligned_cols=84 Identities=18% Similarity=0.322 Sum_probs=70.8
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
..+.|+|.|. .++|||++.+ .. +..+++|.+|.|+|+|+++||++||+|++|||++|.++++.++..+++.
T Consensus 8 ~~r~v~l~k~--~~~~G~~l~~--~~-----~~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~ 78 (106)
T 2eei_A 8 QPRLCYLVKE--GGSYGFSLKT--VQ-----GKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKK 78 (106)
T ss_dssp SSEEEEEECC--SSSCSCCEEC--CS-----SCCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CCEEEEEEEC--CCCCCEEEEe--cc-----CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4588999995 3899999987 22 1246899999999999999999999999999999999999999999853
Q ss_pred -CCeEEEEEeecCC
Q psy8107 435 -ELSLCMMMRSSRT 447 (1613)
Q Consensus 435 -~~~l~L~vr~~~~ 447 (1613)
+..+.|+|.|.+.
T Consensus 79 ~~~~v~l~v~r~~~ 92 (106)
T 2eei_A 79 SGSRVMFLLVDKET 92 (106)
T ss_dssp HCSEEEEEECCTTT
T ss_pred CCCeEEEEEEcCch
Confidence 4789999876543
No 168
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.06 E-value=5.8e-10 Score=110.43 Aligned_cols=90 Identities=20% Similarity=0.278 Sum_probs=72.4
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccc-cCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAER-QDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~-~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
.++|++.|.....++||++.+ ..+... ....+++|.+|.|+|+|+++| |++||+|+.|||++|.++++.++.++++
T Consensus 13 ~~~v~l~r~~~~~~lG~~~~~--~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 90 (108)
T 2jre_A 13 LYSVELFREKDTSSLGISISG--MRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLR 90 (108)
T ss_dssp EEEEEEECCSTTSCCSEEEEC--CCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHH
T ss_pred EEEEEEEecCCCCCcCEEEEc--ccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 467888755555899999987 221110 122479999999999999999 9999999999999999999999999985
Q ss_pred c-CCeEEEEEeecCC
Q psy8107 434 E-ELSLCMMMRSSRT 447 (1613)
Q Consensus 434 ~-~~~l~L~vr~~~~ 447 (1613)
. +..+.|+|.|.+.
T Consensus 91 ~~g~~v~l~v~R~~~ 105 (108)
T 2jre_A 91 NAGNPVRLLLIRRLP 105 (108)
T ss_dssp HHCSEEEEEEEECCC
T ss_pred cCCCeEEEEEEeCCc
Confidence 3 4889999987654
No 169
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.06 E-value=6.7e-10 Score=108.21 Aligned_cols=87 Identities=25% Similarity=0.246 Sum_probs=68.3
Q ss_pred EEEEEecCCCCccceEEEEeeccccccc--CcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc-
Q psy8107 358 QVELQRTTLDHMWGFSVEAELTENAERQ--DELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE- 434 (1613)
Q Consensus 358 ~v~l~k~~~~~~~GF~v~~~~~~~~~~~--~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~- 434 (1613)
+|.+.|.. .+|||++...-... +.. ...+++|.+|.|+|+|+++||++||+|+.|||++|.+++++++..+++.
T Consensus 5 ~v~l~~~~--~~~Gf~l~~~~~~~-~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 81 (99)
T 3khf_A 5 PIVIHSSG--KKYGFSLRAIRVYM-GDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLKS 81 (99)
T ss_dssp CEEEEC-C--CCCCEEEEEEEEES-SSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CEEEEeCC--CCCcEEEEeccccc-CccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 46676754 89999998732110 111 1125689999999999999999999999999999999999999999964
Q ss_pred CCeEEEEEeecCC
Q psy8107 435 ELSLCMMMRSSRT 447 (1613)
Q Consensus 435 ~~~l~L~vr~~~~ 447 (1613)
+..+.|+|+|.+.
T Consensus 82 g~~v~l~v~r~~~ 94 (99)
T 3khf_A 82 GNKISLRTTALEN 94 (99)
T ss_dssp CSEEEEEEECSCS
T ss_pred CCEEEEEEEECCC
Confidence 4899999987543
No 170
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.06 E-value=2.8e-10 Score=116.45 Aligned_cols=89 Identities=13% Similarity=0.244 Sum_probs=70.7
Q ss_pred EEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc-
Q psy8107 357 YQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE- 434 (1613)
Q Consensus 357 ~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~- 434 (1613)
.+|++.|.+ ..++||++.+. .+.......++||.+|.+||+|+++| |++||+|+.|||++|.++++.++.++|+.
T Consensus 27 ~~v~l~k~~-~~glG~~i~~~--~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 103 (127)
T 1wg6_A 27 LEIPLNDSG-SAGLGVSLKGN--KSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRS 103 (127)
T ss_dssp EEEECSSST-TTCCCCEEEEE--EETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred EEEEEeeCC-CCccCeEEecc--cCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 456665444 38999999882 21100112469999999999999999 99999999999999999999999999964
Q ss_pred -------CCeEEEEEeecCCC
Q psy8107 435 -------ELSLCMMMRSSRTE 448 (1613)
Q Consensus 435 -------~~~l~L~vr~~~~~ 448 (1613)
+..+.|+|+|.+..
T Consensus 104 ~~~~g~~~~~v~l~v~R~~~~ 124 (127)
T 1wg6_A 104 MSMEGNIRGMIQLVILRRSGP 124 (127)
T ss_dssp HHHHHHHTCEEEEEEEECSCS
T ss_pred hccccCCCCEEEEEEEeCCCC
Confidence 47899999886653
No 171
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.05 E-value=1e-09 Score=106.26 Aligned_cols=88 Identities=19% Similarity=0.316 Sum_probs=70.2
Q ss_pred eEEEEEEecCCCCccceEEEEeeccccc--ccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAE--RQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~--~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
.+++++.|.. +++||++.+ +.+.. .....+++|.+|.|+|+|+++||++||+|+.|||++|.+.++.++...++
T Consensus 4 ~~~v~~~~~~--~glG~~i~~--g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~ 79 (97)
T 2w4f_A 4 ELTLTILRQT--GGLGISIAG--GKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALR 79 (97)
T ss_dssp EEEEEEECBT--TBSSEEEEE--CTTSCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEEeCC--CceeEEEEC--CccCCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 3567787763 899999987 21100 01235799999999999999999999999999999999999988877774
Q ss_pred -cCCeEEEEEeecCC
Q psy8107 434 -EELSLCMMMRSSRT 447 (1613)
Q Consensus 434 -~~~~l~L~vr~~~~ 447 (1613)
.+..+.|+|+|.+.
T Consensus 80 ~~g~~v~l~v~R~g~ 94 (97)
T 2w4f_A 80 GAGTAVQMRVWRERE 94 (97)
T ss_dssp TSCSEEEEEEECCSS
T ss_pred CCCCeEEEEEEeCCc
Confidence 44899999988654
No 172
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.05 E-value=3.8e-10 Score=113.58 Aligned_cols=90 Identities=19% Similarity=0.264 Sum_probs=72.7
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccc--cCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAER--QDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~--~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
..+.|+|.|... .+|||++.+ +.+... +...+++|.+|.|+|+|+ +||++||+|++|||++|.++++.++..++
T Consensus 14 ~~~~v~l~k~~~-~glG~~i~g--g~~~~~~~~~~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l 89 (117)
T 2csj_A 14 EQYTVTLQKDSK-RGFGIAVSG--GRDNPHFENGETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQL 89 (117)
T ss_dssp EEEEEEEECCSS-STTCEEEEC--CSSCCCCSSCCCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHH
T ss_pred eEEEEEEEECCC-CccCEEEeC--CcCCccccCCCCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 357889998763 899999987 221000 023569999999999997 99999999999999999999999999998
Q ss_pred hc-CCeEEEEEeecCCC
Q psy8107 433 QE-ELSLCMMMRSSRTE 448 (1613)
Q Consensus 433 ~~-~~~l~L~vr~~~~~ 448 (1613)
+. +..+.|+|+|.+..
T Consensus 90 ~~~~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 90 RKSGKIAAIVVKRPRKV 106 (117)
T ss_dssp HHSCSEEEEEEEEEEEC
T ss_pred hcCCCeEEEEEEECCcc
Confidence 64 48999999886543
No 173
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.05 E-value=9.4e-10 Score=109.69 Aligned_cols=91 Identities=20% Similarity=0.386 Sum_probs=74.1
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCCC
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAFG 83 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~dg 83 (1613)
..|||.++.++ ..++||+.||||++..|++||++.. ..+...|.|.++......+ +|.|.+.++ +
T Consensus 10 ~~G~L~K~~~~----~~~~WkkR~fvL~~~~L~yy~~~~~------~~~~g~i~l~~~~~v~~~~----~~~F~i~~~-~ 74 (115)
T 2cod_A 10 KSGWLDKLSPQ----GKRMFQKRWVKFDGLSISYYNNEKE------MYSKGIIPLSAISTVRVQG----DNKFEVVTT-Q 74 (115)
T ss_dssp EEEEEEECCSS----SSSCCEEEEEEECSSEEEEEESSCC------SSCCCEEETTTEEEEEEET----TTEEEEEES-S
T ss_pred EEEEEEEcCCC----CCCCCceEEEEEECCEEEEEcCCCC------cccCCEEECCcceEEEeCC----CCEEEEEeC-C
Confidence 57898876542 2467999999999999999999743 3578899999875443333 799999965 6
Q ss_pred CeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 84 DAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 84 ~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
+.|+|+|++++|++.||++|+.++..
T Consensus 75 r~~~l~a~s~~e~~~Wi~~l~~~~~~ 100 (115)
T 2cod_A 75 RTFVFRVEKEEERNDWISILLNALKS 100 (115)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999754
No 174
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.05 E-value=4.5e-10 Score=114.65 Aligned_cols=103 Identities=21% Similarity=0.399 Sum_probs=71.5
Q ss_pred ccceEEecccccccccCCCceEEEEEEeC-CeEEEecCCCc-----CCC------CCCCCCCceeEeCceEEeeC-----
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKG-TTLLFYPCDSR-----EGR------SVDAAPKHLIIVDGAIMQPI----- 66 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG-~~L~fyKd~~~-----~~~------~~~~~p~~~I~l~~~~~~~a----- 66 (1613)
..|||.++.++ ...++||+.|+||++ ..|++|++... ... .....|...|.+.++.+...
T Consensus 6 k~G~L~K~~g~---~~~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~~ 82 (128)
T 2rlo_A 6 KQSFLLKRSGN---SLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGSA 82 (128)
T ss_dssp EEEEEEEECSC---STTCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCCC
T ss_pred eEEEEEEecCC---CccCCccEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCccccccccccccccccc
Confidence 57888887432 124689999999997 67777765211 000 01123444555655544321
Q ss_pred CCCCCCCceEEEEcCCCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 67 PEHPKRDYIFCLSTAFGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 67 ~dy~KK~nVF~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
+...+++|.|.+.+++++.|+|||+|++||+.||++|+.++..
T Consensus 83 ~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~ 125 (128)
T 2rlo_A 83 GQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILA 125 (128)
T ss_dssp SSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred cccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 1112688999999999999999999999999999999999874
No 175
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.05 E-value=1.4e-10 Score=117.33 Aligned_cols=95 Identities=15% Similarity=0.272 Sum_probs=70.0
Q ss_pred ccceEEecccccccccCCCceEEEEEEeC-CeEEEecCCCcCCCCCCCCCCceeEeCceEEeeC---CCCCCCCceEEEE
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKG-TTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPI---PEHPKRDYIFCLS 79 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG-~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a---~dy~KK~nVF~L~ 79 (1613)
..|||.++.+. .++||+.||||++ ..|++|+++... .+...|+|.++....+ ....+|+|+|+|.
T Consensus 10 ~~G~L~K~g~~-----~k~WkkRwfvL~~~~~L~yy~~~~~~------~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~ 78 (125)
T 1unq_A 10 KEGWLHKRGEY-----IKTWRPRYFLLKNDGTFIGYKERPQD------VDQREAPLNNFSVAQCQLMKTERPRPNTFIIR 78 (125)
T ss_dssp EEEEEEEECSS-----SCCEEEEEEEEETTSEEEEESSCCCS------HHHHTSCSEEEECTTCEEEEECSSSTTEEEEE
T ss_pred EEeeEEeccCC-----ccCccCcEEEEecCCEEEEEeCCCCC------CCCceeEccceeEEeeeecccccCCCCEEEEE
Confidence 57999876542 4679999999996 599999987432 2333444444332211 1224789999999
Q ss_pred c---CCCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 80 T---AFGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 80 t---~dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
+ .....|+|+|++++|++.||++|+.|+..
T Consensus 79 ~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~ 111 (125)
T 1unq_A 79 CLQWTTVIERTFHVETPEEREEWTTAIQTVADG 111 (125)
T ss_dssp EEETTEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 7 45679999999999999999999998764
No 176
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.04 E-value=1e-09 Score=108.48 Aligned_cols=90 Identities=16% Similarity=0.236 Sum_probs=72.3
Q ss_pred ceEEEEEEecCCCCccceEEEEeeccccc--ccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAE--RQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~--~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
.++.|+|.|.+. .+|||++.+ +.+.. .+...+++|.+|.|+|+|+ +||++||+|+.|||++|.++++.+....+
T Consensus 7 ~~~~v~l~k~~~-~glG~~i~~--~~~~~~~~~~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~ 82 (107)
T 2h2b_A 7 EQHTVTLHRAPG-FGFGIAISG--GRDNPHFQSGETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQL 82 (107)
T ss_dssp EEEEEEEECBTT-TBTCEEEEE--CTTSCCTTTCCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred eeEEEEEEeCCC-CccCEEEec--CcCCCcccCCCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHh
Confidence 358899999864 899999987 22100 0122579999999999999 99999999999999999999988887776
Q ss_pred h-cCCeEEEEEeecCCC
Q psy8107 433 Q-EELSLCMMMRSSRTE 448 (1613)
Q Consensus 433 ~-~~~~l~L~vr~~~~~ 448 (1613)
+ .+..+.|+|+|.+..
T Consensus 83 ~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 83 RKSGKNAKITIRRKKGG 99 (107)
T ss_dssp HTCCSEEEEEEEEESCC
T ss_pred hCCCCEEEEEEEECCCC
Confidence 5 348999999887654
No 177
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=2.3e-10 Score=112.13 Aligned_cols=83 Identities=22% Similarity=0.460 Sum_probs=69.3
Q ss_pred EEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh-c
Q psy8107 357 YQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ-E 434 (1613)
Q Consensus 357 ~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~-~ 434 (1613)
+++++.|.. .+|||++.+ +.....+++|.+|.++|+|+++| |++||+|++|||++|.++++.++.++++ .
T Consensus 13 ~~v~l~~~~--~g~G~~~~~------~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 84 (103)
T 1wfv_A 13 FTVDMEKGA--KGFGFSIRG------GREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSG 84 (103)
T ss_dssp EECCEECCT--TSSSBCCEE------ETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHH
T ss_pred EEEEEecCC--CcCCEEEec------cccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 556676655 679999988 22222469999999999999999 9999999999999999999999999986 3
Q ss_pred CCeEEEEEeecCC
Q psy8107 435 ELSLCMMMRSSRT 447 (1613)
Q Consensus 435 ~~~l~L~vr~~~~ 447 (1613)
+..+.|+|+|.+.
T Consensus 85 g~~v~l~v~R~~~ 97 (103)
T 1wfv_A 85 GRRVRLLLKRGTG 97 (103)
T ss_dssp CSEECEEEECTTC
T ss_pred CCeEEEEEEECCC
Confidence 4889999987654
No 178
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=1.2e-09 Score=108.64 Aligned_cols=91 Identities=18% Similarity=0.275 Sum_probs=73.3
Q ss_pred ccceEEEEEEecCCCCccceEEEEeeccccc--ccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHH
Q psy8107 353 AKILYQVELQRTTLDHMWGFSVEAELTENAE--RQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLES 430 (1613)
Q Consensus 353 ~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~--~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ 430 (1613)
+....++++.|.. +++||++.+ +.+.. ..+..+++|.+|.|+|+|+++||++||+|+.|||++|.++++.++..
T Consensus 13 ~~~~~~~~l~~~~--~glG~~i~~--g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~ 88 (110)
T 1x5q_A 13 EEEELTLTILRQT--GGLGISIAG--GKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVE 88 (110)
T ss_dssp CCEEEEEEEECSS--SSCSEEEEE--CTTSCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CcceEEEEEecCC--CeeeEEEEc--cccCCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHH
Confidence 3455678888864 899999987 22100 01235799999999999999999999999999999999999999888
Q ss_pred HHhc-CCeEEEEEeecCC
Q psy8107 431 VLQE-ELSLCMMMRSSRT 447 (1613)
Q Consensus 431 ll~~-~~~l~L~vr~~~~ 447 (1613)
.++. +..+.|+|+|.+.
T Consensus 89 ~~~~~g~~v~l~v~R~g~ 106 (110)
T 1x5q_A 89 ALRGAGTAVQMRVWRESG 106 (110)
T ss_dssp HHHSCCSEEEEEEEECSS
T ss_pred HhhCCCCeEEEEEEECCc
Confidence 8863 5899999998764
No 179
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.04 E-value=5.8e-10 Score=111.06 Aligned_cols=84 Identities=23% Similarity=0.296 Sum_probs=71.5
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
..++.|++.|.. .++||.+.+ +.. .+++|.+|.++|+|+++| |++||+|+.|||++|.++++.++.+++
T Consensus 14 ~~~~~v~l~~~~--~~lG~~l~~------~~~--~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 83 (111)
T 2dlu_A 14 GHVEEVELINDG--SGLGFGIVG------GKT--SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVL 83 (111)
T ss_dssp SEEEEEEEECCS--SCCCEEEEC------CSS--SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHH
T ss_pred CceEEEEEEeCC--CccCEEEec------cCC--CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 355888998865 689999976 221 358999999999999999 999999999999999999999999999
Q ss_pred hc-CCeEEEEEeecCC
Q psy8107 433 QE-ELSLCMMMRSSRT 447 (1613)
Q Consensus 433 ~~-~~~l~L~vr~~~~ 447 (1613)
+. +..+.|+|+|.+.
T Consensus 84 ~~~g~~v~l~v~R~~~ 99 (111)
T 2dlu_A 84 RNCGNSVRMLVARDPA 99 (111)
T ss_dssp HHHCSEEEEEEEESCT
T ss_pred HhCCCeEEEEEEeCCC
Confidence 63 4789999987644
No 180
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.04 E-value=4.4e-10 Score=110.01 Aligned_cols=86 Identities=21% Similarity=0.239 Sum_probs=69.9
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhc-CCCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHN-GLIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~-GL~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
...+.+++.+... .+|||++.+ +......++|++|.|+|+|+++ ||++||+|++|||++|.+. +.++.+++
T Consensus 8 ~~~~~~~v~~~~~-~~~G~~~~g------g~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~ 79 (100)
T 2edp_A 8 GSFQYVPVQLQGG-APWGFTLKG------GLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILI 79 (100)
T ss_dssp CCCEEEEEECCSC-SCCCCCEEE------EGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHH
T ss_pred CCcEEEEEEECCC-CCcCEEEec------cCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHH
Confidence 3446677776654 689999988 2222246899999999999999 9999999999999999997 88888888
Q ss_pred hcC-CeEEEEEeecCC
Q psy8107 433 QEE-LSLCMMMRSSRT 447 (1613)
Q Consensus 433 ~~~-~~l~L~vr~~~~ 447 (1613)
+.. ..+.|+|+|.+.
T Consensus 80 ~~~~~~v~l~v~R~~~ 95 (100)
T 2edp_A 80 KGSFRILKLIVRRRNS 95 (100)
T ss_dssp HTCCSSCEEEEEECCC
T ss_pred HhCCCeEEEEEEeCCC
Confidence 644 789999988754
No 181
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.04 E-value=9.7e-10 Score=106.25 Aligned_cols=86 Identities=22% Similarity=0.316 Sum_probs=67.2
Q ss_pred EEEEEEecCCCCccceEEEEeecc--cccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 357 YQVELQRTTLDHMWGFSVEAELTE--NAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 357 ~~v~l~k~~~~~~~GF~v~~~~~~--~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
.+|++.|.+ +|||++.+.... +.-.....+++|.+|.|+|+|++ ||++||+|++|||++|.++++.++..+++.
T Consensus 5 ~~v~l~~~~---~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (95)
T 1mfg_A 5 IRVRVEKDP---ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT 80 (95)
T ss_dssp EEEEEECSS---SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHHH
T ss_pred EEEEECCCC---CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhhc
Confidence 456666643 799999982210 00001235799999999999999 999999999999999999999999999854
Q ss_pred -CCeEEEEEeecC
Q psy8107 435 -ELSLCMMMRSSR 446 (1613)
Q Consensus 435 -~~~l~L~vr~~~ 446 (1613)
+..+.|+|.|..
T Consensus 81 ~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 81 FQNTVELIIVREV 93 (95)
T ss_dssp CCSEEEEEEEEEC
T ss_pred CCCeEEEEEEeCC
Confidence 488999998754
No 182
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=8.1e-10 Score=108.33 Aligned_cols=89 Identities=21% Similarity=0.235 Sum_probs=70.0
Q ss_pred ceEEEEEEecCCCCccceEEEEeeccccccc-----CcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHH
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQ-----DELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYL 428 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~-----~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~ 428 (1613)
..+.|.+.|.+. ..+||++.+ ....+.+ ...+++|.+|.|+|+|+++| |++||+|++|||++|.++++.++
T Consensus 4 dp~~v~l~~~~~-~~lG~~~~~--~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~ 80 (103)
T 2fcf_A 4 QPRRVELWREPS-KSLGISIVG--GRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQA 80 (103)
T ss_dssp SCEEEEECCCC--CCCCEEEEC--CCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHH
T ss_pred CCEEEEEEeCCC-CceeEEEEc--cCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 458899988764 789999987 2211111 12469999999999999999 99999999999999999999999
Q ss_pred HHHHhcC-CeEEEEEeecC
Q psy8107 429 ESVLQEE-LSLCMMMRSSR 446 (1613)
Q Consensus 429 ~~ll~~~-~~l~L~vr~~~ 446 (1613)
.++++.. ..+.|+|+|.+
T Consensus 81 ~~~l~~~~~~v~l~v~r~~ 99 (103)
T 2fcf_A 81 VEAIRKAGNPVVFMVQSII 99 (103)
T ss_dssp HHHHHTCCSSEEEEEECCC
T ss_pred HHHHHhCCCcEEEEEEECC
Confidence 9999644 68999998754
No 183
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.04 E-value=7.6e-10 Score=111.56 Aligned_cols=87 Identities=17% Similarity=0.239 Sum_probs=73.8
Q ss_pred ecccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHH
Q psy8107 351 VCAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLE 429 (1613)
Q Consensus 351 v~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~ 429 (1613)
-+|..++.|+|.|.. .++||++.+ ..+ ..+++|.+|.|+|+|+++| |++||+|+.|||++|.++++.++.
T Consensus 10 ~~~~~~~~v~l~k~~--~glG~~l~~--~~~-----~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~ 80 (119)
T 1tp5_A 10 DIPREPRRIVIHRGS--TGLGFNIVG--GED-----GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAA 80 (119)
T ss_dssp CCCCSCEEEEEECTT--SCCCEEEEE--CGG-----GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHH
T ss_pred CCCCccEEEEEEECC--CCccEEEec--CCC-----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 356678999999976 679999988 221 2469999999999999999 999999999999999999998888
Q ss_pred HHHhc-CCeEEEEEeecC
Q psy8107 430 SVLQE-ELSLCMMMRSSR 446 (1613)
Q Consensus 430 ~ll~~-~~~l~L~vr~~~ 446 (1613)
.+++. +..+.|+|+|.+
T Consensus 81 ~~~~~~~~~v~l~v~r~~ 98 (119)
T 1tp5_A 81 IALKNAGQTVTIIAQYKP 98 (119)
T ss_dssp HHHHTSCSEEEEEEEECH
T ss_pred HHHHcCCCeEEEEEEECC
Confidence 88854 478999998754
No 184
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.03 E-value=9.7e-10 Score=118.07 Aligned_cols=87 Identities=20% Similarity=0.329 Sum_probs=71.6
Q ss_pred ceEEEEEEecCCCCccceEEEEe-ecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAE-LTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~-~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
.+.+|+|.|.. .++||+|.+- .+.+ .+....++||++|.+||+|+++| |++||+|++|||++|.++++.++.+++
T Consensus 80 ~~~~v~l~k~~--~glG~~i~g~~~g~~-~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l 156 (170)
T 3egg_C 80 ELFPVELEKDS--EGLGISIIGMGAGAD-MGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL 156 (170)
T ss_dssp EEEEEEEECBT--TBSSEEEEEECSSSS-CCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHH
T ss_pred eEEEEEEEeCC--CeEeEEEEecccCCc-cccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34678888877 6899999881 1111 11123579999999999999999 999999999999999999999999999
Q ss_pred hcC-CeEEEEEee
Q psy8107 433 QEE-LSLCMMMRS 444 (1613)
Q Consensus 433 ~~~-~~l~L~vr~ 444 (1613)
+.. ..+.|+|+|
T Consensus 157 ~~~g~~v~L~V~R 169 (170)
T 3egg_C 157 RNTKGRVRFMIGR 169 (170)
T ss_dssp HHCCSEEEEEEEE
T ss_pred HcCCCEEEEEEEe
Confidence 654 789999987
No 185
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.03 E-value=4.7e-10 Score=109.10 Aligned_cols=81 Identities=15% Similarity=0.235 Sum_probs=67.2
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE 435 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~ 435 (1613)
.+.+++.|.. .+|||++.. .. . ..+++|.+|.|+|+|+++||++||+|++|||++|.+++++++.++++..
T Consensus 10 ~~~~~l~~~~--~g~G~~~~~--~~----~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 80 (98)
T 2jxo_A 10 PRLCTMKKGP--SGYGFNLHS--DK----S-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG 80 (98)
T ss_dssp CEEEEEECTT--TCCCEEEEC--CC----S-SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred cEEEEEEeCC--CcccEEEEe--cC----C-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3667888865 689999987 22 1 1369999999999999999999999999999999999999999999654
Q ss_pred --CeEEEEEeec
Q psy8107 436 --LSLCMMMRSS 445 (1613)
Q Consensus 436 --~~l~L~vr~~ 445 (1613)
..+.|+|.|.
T Consensus 81 ~~~~~~l~v~R~ 92 (98)
T 2jxo_A 81 GDETKLLVVDRE 92 (98)
T ss_dssp TTEEEEEECCHH
T ss_pred CCcEEEEEEECC
Confidence 4566777654
No 186
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.03 E-value=1.2e-10 Score=118.80 Aligned_cols=93 Identities=22% Similarity=0.332 Sum_probs=73.9
Q ss_pred ceEEEEEEecCCCCccceEEEEe------------ecccccc----------cCcceeEEEEecCCChhhhcCCCCCCEE
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAE------------LTENAER----------QDELCCYVSRVEDKSVAMHNGLIKGDEI 412 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~------------~~~~~~~----------~~~~~~~Vs~V~~gg~A~~~GL~~GDeI 412 (1613)
..+.|+|.|.. .+|||++..+ +.+...+ ++..+++|.+|.|+|+|+++||++||+|
T Consensus 8 ~~r~v~l~r~~--~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I 85 (126)
T 2yuy_A 8 GPKTVTLKRTS--QGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAGLCTGDRI 85 (126)
T ss_dssp SCCCEEEECCS--SSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHTCCSSCCC
T ss_pred CCEEEEEEECC--CCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcCCCCCCEE
Confidence 45789999876 6899999751 1110000 0124589999999999999999999999
Q ss_pred EEEcCeecCCCCHHHHHHHHhcC-CeEEEEEeecCCCC
Q psy8107 413 MVINGAIVSDLDMMYLESVLQEE-LSLCMMMRSSRTEP 449 (1613)
Q Consensus 413 l~vNg~~v~~l~~~~~~~ll~~~-~~l~L~vr~~~~~p 449 (1613)
++|||++|.+++++++.++++.. ..+.|+|+|.+..|
T Consensus 86 ~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~~ 123 (126)
T 2yuy_A 86 IKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDSGP 123 (126)
T ss_dssp CEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCCCS
T ss_pred EEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCCCC
Confidence 99999999999999999999654 89999998876554
No 187
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.03 E-value=1.1e-09 Score=108.64 Aligned_cols=81 Identities=17% Similarity=0.305 Sum_probs=69.3
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
+..|+|.|... .++||++.. .+ .+++|++|.|||+|+++| |++||.|++|||++|.++++.++..+++.
T Consensus 3 ~~~v~L~k~~~-~glG~~i~~--~~-------~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~ 72 (106)
T 2la8_A 3 KFNVDLMKKAG-KELGLSLSP--NE-------IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG 72 (106)
T ss_dssp EEEEEECCBSS-STTCCEEEE--CS-------SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHS
T ss_pred EEEEEEEeCCC-CccCEEEEe--CC-------CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence 46788887664 789999876 21 359999999999999999 99999999999999999999999999865
Q ss_pred C-CeEEEEEeecC
Q psy8107 435 E-LSLCMMMRSSR 446 (1613)
Q Consensus 435 ~-~~l~L~vr~~~ 446 (1613)
. .++.|+|.|..
T Consensus 73 ~~~~v~l~v~R~~ 85 (106)
T 2la8_A 73 ANGKVSMEVTRPK 85 (106)
T ss_dssp CBSCEEEEEEECC
T ss_pred CCCeEEEEEEeCC
Confidence 4 77999998753
No 188
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.03 E-value=1.5e-09 Score=108.02 Aligned_cols=86 Identities=20% Similarity=0.356 Sum_probs=70.0
Q ss_pred EEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc-
Q psy8107 357 YQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE- 434 (1613)
Q Consensus 357 ~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~- 434 (1613)
+.+++.+.. .++||++.. ..+. .....+++|.+|.|+|+|+++| |++||+|+.|||++|.++++.++.++++.
T Consensus 13 ~~~~l~~~~--~glG~~~~~--~~~~-~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 87 (111)
T 2koj_A 13 LNIQLKKGT--EGLGFSITS--RDVT-IGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRST 87 (111)
T ss_dssp EEEEEECBT--TBTCEEEEE--CSCS-SSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred EEEEEEECC--CccCEEEEe--ccCC-CCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 456666655 799999988 2211 1112469999999999999999 99999999999999999999999999965
Q ss_pred --CCeEEEEEeecCC
Q psy8107 435 --ELSLCMMMRSSRT 447 (1613)
Q Consensus 435 --~~~l~L~vr~~~~ 447 (1613)
+..+.|+|.|.+.
T Consensus 88 ~~g~~v~l~v~R~~~ 102 (111)
T 2koj_A 88 KMEGTVSLLVFRQEE 102 (111)
T ss_dssp CCSSEEEEEEEECCC
T ss_pred CCCCeEEEEEEeCCC
Confidence 4789999987654
No 189
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.03 E-value=1.1e-09 Score=109.66 Aligned_cols=82 Identities=21% Similarity=0.261 Sum_probs=69.0
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
...++|+|.|.+ .+|||++.. + . .+.+|.+|.+ +|..+||++||.|++|||++|.+++|+|++++|+
T Consensus 11 ~~~~~V~L~Kg~--~G~GFsI~~------~-~--~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk 77 (113)
T 3soe_A 11 GLLVTIPLIKGP--KGFGFAIAD------S-P--TGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLK 77 (113)
T ss_dssp CEEEEEEEECBT--TBSSEEEEE------E-T--TEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred CCEEEEEEEECC--CcccEEEeC------C-C--CCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 355889999975 799999954 1 1 1357999988 4899999999999999999999999999999997
Q ss_pred cC---CeEEEEEeecCCC
Q psy8107 434 EE---LSLCMMMRSSRTE 448 (1613)
Q Consensus 434 ~~---~~l~L~vr~~~~~ 448 (1613)
+. ..+.|+|+|.+..
T Consensus 78 ~~~~G~~v~L~V~R~g~~ 95 (113)
T 3soe_A 78 QFPVGADVPLLILRGGPP 95 (113)
T ss_dssp HSCTTCEEEEEEEESSCC
T ss_pred cCCCCCEEEEEEEECCcc
Confidence 63 5899999987653
No 190
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.02 E-value=4.7e-10 Score=112.50 Aligned_cols=89 Identities=15% Similarity=0.225 Sum_probs=72.5
Q ss_pred cccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHH
Q psy8107 352 CAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLES 430 (1613)
Q Consensus 352 ~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ 430 (1613)
.|...+.|++.|.. .++||++.+ ..+ .+ ..+++|.+|.++|+|+++| |++||+|+.|||++|.++++.++.+
T Consensus 14 ~~~~~~~v~l~~~~--~glG~~l~~--~~~--~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 86 (116)
T 2dm8_A 14 VPGQEMIIEISKGR--SGLGLSIVG--GKD--TP-LNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAIT 86 (116)
T ss_dssp CTTSCEEEEEECCS--SCCCCCCBC--CTT--SS-CSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHH
T ss_pred CCCCEEEEEEEECC--CcccEEEeC--CCC--CC-cCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 34455778888765 789999977 221 11 1369999999999999999 9999999999999999999999999
Q ss_pred HHhcC-CeEEEEEeecCC
Q psy8107 431 VLQEE-LSLCMMMRSSRT 447 (1613)
Q Consensus 431 ll~~~-~~l~L~vr~~~~ 447 (1613)
+++.. ..+.|+|+|.+.
T Consensus 87 ~l~~~~~~v~l~v~R~~~ 104 (116)
T 2dm8_A 87 ALRQTPQKVRLVVYRDEA 104 (116)
T ss_dssp HHHTCCSEEEEEEECCSS
T ss_pred HHHhCCCeEEEEEEeCCc
Confidence 99644 789999987554
No 191
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=4.2e-10 Score=108.33 Aligned_cols=82 Identities=21% Similarity=0.211 Sum_probs=69.3
Q ss_pred ccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHH
Q psy8107 353 AKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESV 431 (1613)
Q Consensus 353 ~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~l 431 (1613)
++.++.|+|.|.+. .++||++.. .. .+++|.+|.|+|+|+++| |++||+|++|||++| +.+++++.++
T Consensus 4 ~~~~r~v~l~k~~~-~~lG~~i~~--~~-------~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~ 72 (91)
T 2e7k_A 4 GSSGRMVGIRKTAG-EHLGVTFRV--EG-------GELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQEL 72 (91)
T ss_dssp CCCSCBCCBCCCTT-CCCCEEEEE--SS-------SSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHH
T ss_pred CCCcEEEEEEECCC-CcEeEEEEe--cC-------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHH
Confidence 34567888988664 789999987 11 348999999999999987 999999999999999 9999999999
Q ss_pred HhcC-CeEEEEEeec
Q psy8107 432 LQEE-LSLCMMMRSS 445 (1613)
Q Consensus 432 l~~~-~~l~L~vr~~ 445 (1613)
++.. .++.|+|.|.
T Consensus 73 l~~~~~~v~l~v~~~ 87 (91)
T 2e7k_A 73 LRNASGSVILKILSG 87 (91)
T ss_dssp HHTCCSSBCEEEECC
T ss_pred HHcCCCeEEEEEEEC
Confidence 9643 7788888764
No 192
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.01 E-value=1.5e-09 Score=106.71 Aligned_cols=90 Identities=21% Similarity=0.350 Sum_probs=69.7
Q ss_pred ceEEEEEEecC--CCCccceEEEEeecccccc------cCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHH
Q psy8107 355 ILYQVELQRTT--LDHMWGFSVEAELTENAER------QDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMM 426 (1613)
Q Consensus 355 ~~~~v~l~k~~--~~~~~GF~v~~~~~~~~~~------~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~ 426 (1613)
.+..|++.|.. ...++||++.+....+... +...+++|.+|.|+|+|+++||++||+|+.|||++|.+.+++
T Consensus 4 ~~~~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~ 83 (104)
T 3sfj_A 4 VVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHD 83 (104)
T ss_dssp EEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHH
T ss_pred ceEEEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHH
Confidence 34566666654 2347999999733221000 223579999999999999999999999999999999999999
Q ss_pred HHHHHHhcC--CeEEEEEee
Q psy8107 427 YLESVLQEE--LSLCMMMRS 444 (1613)
Q Consensus 427 ~~~~ll~~~--~~l~L~vr~ 444 (1613)
++.++++.. ..+.|+|+|
T Consensus 84 ~~~~~l~~~~g~~v~l~v~R 103 (104)
T 3sfj_A 84 QARKRLTKRSEEVVRLLVTR 103 (104)
T ss_dssp HHHHHHTCTTCSEEEEEEEE
T ss_pred HHHHHHHhCCCCEEEEEEEc
Confidence 999999643 689999876
No 193
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.01 E-value=1.1e-09 Score=111.92 Aligned_cols=91 Identities=22% Similarity=0.318 Sum_probs=73.6
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
..+.|+|.|.+ ..++||++.+...... .....+++|.+|.++|+|+++| |++||+|+.|||++|.+++++++.++++
T Consensus 15 ~~~~v~l~~~~-~~~lG~~i~~~~~~~~-~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~ 92 (129)
T 2dmz_A 15 ETYNVELVRKD-GQSLGIRIVGYVGTSH-TGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLR 92 (129)
T ss_dssp EEEEEEECCCT-TCCCCEEEEEECCCSS-SCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHH
T ss_pred cEEEEEEEeCC-CCCcCEEEEeecCCcc-cCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34678887755 3899999988221110 0123579999999999999999 9999999999999999999999999996
Q ss_pred c-CCeEEEEEeecCC
Q psy8107 434 E-ELSLCMMMRSSRT 447 (1613)
Q Consensus 434 ~-~~~l~L~vr~~~~ 447 (1613)
. +..+.|+|.|.+.
T Consensus 93 ~~~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 93 NAGQVVHLTLVRRKT 107 (129)
T ss_dssp HCCSSEEEEEEEESS
T ss_pred cCCCeEEEEEEeCCc
Confidence 5 4889999998764
No 194
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.00 E-value=9.5e-10 Score=109.66 Aligned_cols=80 Identities=16% Similarity=0.103 Sum_probs=68.5
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
...+.|+|.|.+ +++||.+.+ . ..++|.+|.|||+|+++||++||+|+.|||++|.+++++++.++++
T Consensus 22 ~~~r~v~l~k~~--~~~G~~l~~------~----~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~ 89 (109)
T 2vsv_A 22 SMPRSIRFTAEE--GDLGFTLRG------N----APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLK 89 (109)
T ss_dssp HSCEEEEECCGG--GCCCEEEES------S----SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCEEEEEEeCC--CceeEEEeC------C----CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 456899999964 899999865 1 2379999999999999999999999999999999999999999996
Q ss_pred cC--CeEEEEEeec
Q psy8107 434 EE--LSLCMMMRSS 445 (1613)
Q Consensus 434 ~~--~~l~L~vr~~ 445 (1613)
.. ..+.|+|.|.
T Consensus 90 ~~~~~~v~l~V~~~ 103 (109)
T 2vsv_A 90 SFGEDEIEMKVVSL 103 (109)
T ss_dssp TTTTSCEEEEEESC
T ss_pred hCCCCeEEEEEEEC
Confidence 44 4599998754
No 195
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.00 E-value=1.5e-09 Score=109.58 Aligned_cols=83 Identities=25% Similarity=0.320 Sum_probs=67.2
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhc-CCCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHN-GLIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~-GL~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
..+.+++.+. +++||+|.+ +.+ ... ..++|.+|.+||+|+++ ||++||+|++|||++|.+++++++.++|+
T Consensus 18 ~~~~~~~~~~---~glG~~i~g--g~~--~~~-~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~ 89 (118)
T 1v6b_A 18 DVRLLRIKKE---GSLDLALEG--GVD--SPV-GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQ 89 (118)
T ss_dssp CEEEEEEESC---SCCCCEEEE--BTT--SSS-CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHH
T ss_pred eEEEEEECCC---CccCEEEEc--ccC--CCC-CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4466666654 489999988 221 111 23899999999999999 99999999999999999999999999985
Q ss_pred c-----CCeEEEEEeec
Q psy8107 434 E-----ELSLCMMMRSS 445 (1613)
Q Consensus 434 ~-----~~~l~L~vr~~ 445 (1613)
. +.+++|+|.|.
T Consensus 90 ~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 90 KAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp HHHHHTCSEEEEEEECC
T ss_pred HhhhcCCCeEEEEEEeC
Confidence 3 46899999864
No 196
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.00 E-value=1.4e-09 Score=105.54 Aligned_cols=80 Identities=18% Similarity=0.295 Sum_probs=68.0
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
..++++.|... .++||++.. .+ .+++|++|.|||+|+++| |++||+|+.|||++|.++++.++..+++.
T Consensus 9 ~~~v~l~~~~~-~glG~~~~~--~~-------~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~ 78 (96)
T 2qkv_A 9 KFNVDLMKKAG-KELGLSLSP--NE-------IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKG 78 (96)
T ss_dssp CEEEEEECBTT-BCCCEEEEE--CS-------SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred eEEEEEEeCCC-CCccEEEEe--CC-------CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 46788877554 689999876 11 348999999999999999 99999999999999999999999999865
Q ss_pred C-CeEEEEEeec
Q psy8107 435 E-LSLCMMMRSS 445 (1613)
Q Consensus 435 ~-~~l~L~vr~~ 445 (1613)
. ..+.|+|+|.
T Consensus 79 ~~~~v~l~v~R~ 90 (96)
T 2qkv_A 79 ANGKVSMEVTRP 90 (96)
T ss_dssp CSSEEEEEEECC
T ss_pred CCCcEEEEEEeC
Confidence 4 7899998764
No 197
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.00 E-value=1.1e-09 Score=107.49 Aligned_cols=88 Identities=22% Similarity=0.291 Sum_probs=69.2
Q ss_pred ceEEEEEEecCCCCccceEEEEeecc--cccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTE--NAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~--~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
....|++.|.+ +|||++.+.... ..-.+...+++|.+|.|+|+|++ ||++||+|++|||++|.++++.++..++
T Consensus 11 ~~~~v~l~~~~---~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~ 86 (103)
T 1n7t_A 11 QEIRVRVEKDP---ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLL 86 (103)
T ss_dssp CCEEEEEECSS---CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred EEEEEEEccCC---CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHh
Confidence 34567887754 799999982110 00001335799999999999999 9999999999999999999999999998
Q ss_pred hc-CCeEEEEEeecC
Q psy8107 433 QE-ELSLCMMMRSSR 446 (1613)
Q Consensus 433 ~~-~~~l~L~vr~~~ 446 (1613)
+. +..+.|+|.|..
T Consensus 87 ~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 87 KTFQNTVELIIVREV 101 (103)
T ss_dssp HHCCSEEEEEEECCC
T ss_pred hcCCCeEEEEEEecC
Confidence 64 488999998753
No 198
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.00 E-value=1.2e-09 Score=130.25 Aligned_cols=94 Identities=22% Similarity=0.511 Sum_probs=79.7
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF 82 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d 82 (1613)
...|||.+++++ .++||+.|+||+++.|++||++.. ..|.+.|+|.++.+.... ..+|+|+|+|.+++
T Consensus 214 ~k~G~L~K~g~~-----~k~WkkRwFVL~~~~L~Yyk~~~~------~~p~G~I~L~~~~v~~~~-~~~~~~~F~I~~~~ 281 (347)
T 2r09_A 214 DREGWLLKLGGR-----VKTWKRRWFILTDNCLYYFEYTTD------KEPRGIIPLENLSIREVE-DPRKPNCFELYNPS 281 (347)
T ss_dssp CEEEEEEEECSS-----SCCEEEEEEEEETTEEEEESSTTC------SSCSEEEECTTCEEEEEC-CSSCSSEEEEECSS
T ss_pred ccCCeeEecCCC-----cccceeEEEEEcCCEEEEEcCCCc------cCCcEEEEcCCeEEEEcc-CCCCCCEEEEEeCC
Confidence 357999877554 468999999999999999998742 457889999999876654 46899999999885
Q ss_pred ---------------------CCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 83 ---------------------GDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 83 ---------------------g~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
++.|+|+|++++|++.||++|+.++.
T Consensus 282 ~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~ 328 (347)
T 2r09_A 282 HKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 328 (347)
T ss_dssp STTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 37899999999999999999999876
No 199
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=1.5e-09 Score=104.44 Aligned_cols=75 Identities=23% Similarity=0.276 Sum_probs=64.0
Q ss_pred EEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc-C
Q psy8107 357 YQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE-E 435 (1613)
Q Consensus 357 ~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~-~ 435 (1613)
..+.+.+....++|||.+.. | +|++|.++|+|+++||++||+|++|||++|.+.+++++.++++. +
T Consensus 13 ~~~~i~~~~~~~~lG~~~~~------G-------~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g 79 (90)
T 1y7n_A 13 TTVLIRRPDLRYQLGFSVQN------G-------IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAV 79 (90)
T ss_dssp EEEEEEESSTTSCCCEEEET------T-------EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred ceEEEEeCCCccccCeEecC------C-------EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45566666666899998832 2 89999999999999999999999999999999999999999964 4
Q ss_pred CeEEEEEee
Q psy8107 436 LSLCMMMRS 444 (1613)
Q Consensus 436 ~~l~L~vr~ 444 (1613)
..+.|+|.+
T Consensus 80 ~~v~l~v~p 88 (90)
T 1y7n_A 80 GEIHMKTMP 88 (90)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEEE
Confidence 788888864
No 200
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.99 E-value=1.7e-09 Score=110.14 Aligned_cols=89 Identities=21% Similarity=0.249 Sum_probs=71.2
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccc-----cCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHH
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAER-----QDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLE 429 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~-----~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~ 429 (1613)
.+.|++.|.+. +++||++.+ ....+. ....+++|.+|.|+|+|+++| |++||+|++|||++|.+++++++.
T Consensus 25 p~~v~l~k~~~-~~lGi~v~~--~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~ 101 (123)
T 2iwq_A 25 PRRVELWREPS-KSLGISIVG--GRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAV 101 (123)
T ss_dssp CEEEEECCCTT-SCCSEEEEE--CC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CEEEEEEecCC-CCccEEEEe--ccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 47788888654 789999987 211111 112469999999999999999 999999999999999999999999
Q ss_pred HHHhcC-CeEEEEEeecCC
Q psy8107 430 SVLQEE-LSLCMMMRSSRT 447 (1613)
Q Consensus 430 ~ll~~~-~~l~L~vr~~~~ 447 (1613)
++++.. ..+.|+|+|.+.
T Consensus 102 ~~l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 102 EAIRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp HHHHHCCSSEEEEEECCCC
T ss_pred HHHHcCCCeEEEEEEECCc
Confidence 999643 689999987543
No 201
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.99 E-value=2.4e-09 Score=106.71 Aligned_cols=85 Identities=20% Similarity=0.219 Sum_probs=72.5
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCC-CCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGL-IKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL-~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
++++|++.|... +++||++.. .+ +..+++|.+|.++|+|+++|| ++||+|+.|||+++.+++++++.++++
T Consensus 1 n~~~v~l~~~~~-~glG~~~~~--~~-----~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~ 72 (112)
T 1qau_A 1 NVISVRLFKRKV-GGLGFLVKE--RV-----SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLR 72 (112)
T ss_dssp CEEEEEEECBTT-TBTSEEEEE--CS-----SSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred CEEEEEEEcCCC-CceeEEEEe--cC-----CCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 467899988653 789999988 22 124699999999999999998 999999999999999999999999996
Q ss_pred c--CCeEEEEEeecCC
Q psy8107 434 E--ELSLCMMMRSSRT 447 (1613)
Q Consensus 434 ~--~~~l~L~vr~~~~ 447 (1613)
. +.++.|+|.|.+.
T Consensus 73 ~~~g~~v~l~v~R~g~ 88 (112)
T 1qau_A 73 GIASETHVVLILRGPE 88 (112)
T ss_dssp HSCSSSEEEEEEECCT
T ss_pred hCCCCcEEEEEEeCCc
Confidence 4 3789999988654
No 202
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=98.99 E-value=5.1e-10 Score=120.19 Aligned_cols=103 Identities=16% Similarity=0.250 Sum_probs=77.1
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEE-eeC---CCC-CCC------
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIM-QPI---PEH-PKR------ 72 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~-~~a---~dy-~KK------ 72 (1613)
..|||.++.......+.++||+.|+||++..|++||++... .....+.+.|.|.++.+ +.+ .+. .++
T Consensus 5 keG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~--~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~ 82 (169)
T 1btk_A 5 LESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFER--GRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRG 82 (169)
T ss_dssp EEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTT--TEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC----
T ss_pred EEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCcc--CCCCceeeEEECcceEEEEeccCCCCcchhccccccc
Confidence 57899887543223456789999999999999999984211 12346778999998753 444 221 122
Q ss_pred ---------------CceEEEEcCCCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 73 ---------------DYIFCLSTAFGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 73 ---------------~nVF~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
+|+|++.|++ +.|+|+|+|++||++||++|+.++..
T Consensus 83 ~~~~~~~~~~i~~~~~~~F~I~t~~-rt~yl~A~s~~E~~eWi~aI~~~i~~ 133 (169)
T 1btk_A 83 EESSEMEQISIIERFPYPFQVVYDE-GPLYVFSPTEELRKRWIHQLKNVIRY 133 (169)
T ss_dssp -----CCTTHHHHCCCEEEEEEETT-CCEEEEESCHHHHHHHHHHHHHHHTT
T ss_pred CcccccccccccccccccEEEEeCC-ceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 2999999988 57889999999999999999999874
No 203
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.98 E-value=1.1e-09 Score=109.50 Aligned_cols=83 Identities=24% Similarity=0.269 Sum_probs=70.9
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE 435 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~ 435 (1613)
.+.|++.+.+. .++||++.. +.....+++|.+|.++|+|+++||++||+|+.|||++|.++++.++.++++..
T Consensus 16 ~~~v~~~~~~~-~~lG~~l~~------~~~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 88 (114)
T 1x5n_A 16 EKKVFISLVGS-RGLGCSISS------GPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS 88 (114)
T ss_dssp SEEEEECCCSS-CCCCEEEEE------CCSSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC
T ss_pred cEEEEEEEcCC-CceeEEEee------cCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 37788877664 899999987 22233569999999999999999999999999999999999999999999767
Q ss_pred CeEEEEEeec
Q psy8107 436 LSLCMMMRSS 445 (1613)
Q Consensus 436 ~~l~L~vr~~ 445 (1613)
..+.|+|.|.
T Consensus 89 ~~v~l~v~r~ 98 (114)
T 1x5n_A 89 RSLTISIVAA 98 (114)
T ss_dssp SSEEEEECSS
T ss_pred CeEEEEEEcC
Confidence 8899998764
No 204
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.98 E-value=1.8e-09 Score=104.28 Aligned_cols=87 Identities=16% Similarity=0.353 Sum_probs=69.2
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
+.+|++.|.. .++||++.+.... ......+++|.+|.++|+|+++| |++||+|+.|||++|.++++.++.++++.
T Consensus 5 ~~~v~l~~~~--~~lG~~i~~~~~~--~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (97)
T 2iwn_A 5 TFDVELTKNV--QGLGITIAGYIGD--KKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH 80 (97)
T ss_dssp EEEEEEECBT--TBSCEEEECCCCC------CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT
T ss_pred EEEEEEecCC--CCCcEEEEccCCC--CCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4667776654 7899999882111 01122569999999999999999 99999999999999999999999998854
Q ss_pred -CCeEEEEEeecC
Q psy8107 435 -ELSLCMMMRSSR 446 (1613)
Q Consensus 435 -~~~l~L~vr~~~ 446 (1613)
+..+.|+|.|.+
T Consensus 81 ~~~~v~l~v~r~g 93 (97)
T 2iwn_A 81 TGQTVLLTLMRRG 93 (97)
T ss_dssp CCSEEEEEEEEEE
T ss_pred CCCeEEEEEEeCC
Confidence 378999998764
No 205
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=98.98 E-value=8.3e-10 Score=124.07 Aligned_cols=96 Identities=17% Similarity=0.317 Sum_probs=79.2
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCCC
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAFG 83 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~dg 83 (1613)
..|||.++.++....++++||+.||||+++.|++||++.. ..+.+.|.|.++.+... ..+|+|+|.|.|+ +
T Consensus 60 k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~------~~~~g~I~L~~~~~v~~--~~~k~~~F~I~t~-~ 130 (228)
T 3tfm_A 60 KQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSE------EKLKGTVEVRSAKEIID--NTNKENGIDIIMA-D 130 (228)
T ss_dssp EEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTC------CSEEEEEEGGGCSEEEE--ETTTTSEEEEECS-S
T ss_pred eEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCC------cceeEEEEcCCCEEecc--CCCCCcEEEEEcC-C
Confidence 4688888766543455688999999999999999998843 35778999998865443 3378999999885 5
Q ss_pred CeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 84 DAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 84 ~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
+.|+|+|+|++|++.||++|+.++.
T Consensus 131 r~~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 131 RTFHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999976
No 206
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.98 E-value=9.9e-10 Score=110.03 Aligned_cols=84 Identities=19% Similarity=0.318 Sum_probs=72.0
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
..+++.+.+... ..|||.+.. .. +..+++|.+|.|+|+|+++||++||+|+.|||++|.+.++.++.++++.
T Consensus 13 dp~~~~l~~~~~-~~~G~~l~~--~~-----~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~ 84 (114)
T 2edz_A 13 NPRECKLSKQEG-QNYGFFLRI--EK-----DTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRK 84 (114)
T ss_dssp CCEEEEEECCTT-CCCSCEEEC--CT-----TCCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHH
T ss_pred CCEEEEEeCCCC-CcccEEEEE--ec-----CCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 568899988764 789999977 21 1145899999999999999999999999999999999999999999964
Q ss_pred -CCeEEEEEeecC
Q psy8107 435 -ELSLCMMMRSSR 446 (1613)
Q Consensus 435 -~~~l~L~vr~~~ 446 (1613)
+..+.|+|+|.+
T Consensus 85 ~g~~v~l~v~R~~ 97 (114)
T 2edz_A 85 SGNSVTLLVLDGD 97 (114)
T ss_dssp TCSEEEEEEECHH
T ss_pred CCCEEEEEEEECC
Confidence 489999998764
No 207
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.98 E-value=4.3e-10 Score=109.28 Aligned_cols=81 Identities=25% Similarity=0.318 Sum_probs=70.9
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHh-
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQ- 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~- 433 (1613)
..++|+|.|.+...+|||.+.+ + .+++|.+|.|+|+|+ +||++||+|++|||++|.++++.++..+++
T Consensus 8 ~~~~v~l~~~~~~~~~G~~l~~---~-------~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~ 76 (96)
T 2edv_A 8 VRHTVKIDKDTLLQDYGFHISE---S-------LPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILRE 76 (96)
T ss_dssp EEEEEEECCCSSSCSCSBCCCS---S-------SSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHH
T ss_pred ccEEEEEEECCCCCcccEEEec---C-------CCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4688999998865799999865 1 248999999999996 999999999999999999999999999996
Q ss_pred cCCeEEEEEeecC
Q psy8107 434 EELSLCMMMRSSR 446 (1613)
Q Consensus 434 ~~~~l~L~vr~~~ 446 (1613)
.+..+.|+|.|.+
T Consensus 77 ~g~~v~l~v~R~~ 89 (96)
T 2edv_A 77 AEDSLSITVVRCT 89 (96)
T ss_dssp CSSCEEEEEEECC
T ss_pred CCCeEEEEEEECC
Confidence 4589999999876
No 208
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.52 E-value=6e-11 Score=118.89 Aligned_cols=85 Identities=18% Similarity=0.224 Sum_probs=71.0
Q ss_pred cccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhh-cCCCCCCEEEEEcCeecCCCCHHHHHH
Q psy8107 352 CAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMH-NGLIKGDEIMVINGAIVSDLDMMYLES 430 (1613)
Q Consensus 352 ~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~-~GL~~GDeIl~vNg~~v~~l~~~~~~~ 430 (1613)
....++.|++.|.+. ++|||++.+ +.....+++|++|.|+|+|++ +||++||+|++|||++|.+.++.++.+
T Consensus 24 ~~~~~~~v~l~k~~~-~glG~~l~~------g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~ 96 (112)
T 2lob_A 24 YFQGIRKVLLLKEDH-EGLGISITG------GKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVT 96 (112)
Confidence 334678899999775 799999988 222234689999999999999 999999999999999999999999999
Q ss_pred HHhcC-CeEEEEEe
Q psy8107 431 VLQEE-LSLCMMMR 443 (1613)
Q Consensus 431 ll~~~-~~l~L~vr 443 (1613)
++++. ..+.|+|+
T Consensus 97 ~l~~~~~~v~l~V~ 110 (112)
T 2lob_A 97 ILSQQRGEIEFEVV 110 (112)
Confidence 99644 56777765
No 209
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.96 E-value=1.4e-09 Score=106.99 Aligned_cols=87 Identities=17% Similarity=0.286 Sum_probs=67.6
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccc-cccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENA-ERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~-~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
..+.+.+.|.+. ++|||++.+.-.+.. +.....+++|.+|.++|+|+++||++||+|+.|||++|.+++++++.++++
T Consensus 15 ~~~~v~l~~~~~-~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~ 93 (104)
T 2z17_A 15 QRKLVTVEKQDN-ETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIR 93 (104)
T ss_dssp CCCEEEEECCTT-SCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHH
T ss_pred cceEEEEEeCCC-CCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 346677888764 789999988211100 112235799999999999999999999999999999999999999999996
Q ss_pred cC-CeEEEEE
Q psy8107 434 EE-LSLCMMM 442 (1613)
Q Consensus 434 ~~-~~l~L~v 442 (1613)
.. ..+.|+|
T Consensus 94 ~~~~~v~l~v 103 (104)
T 2z17_A 94 SSGNLLTIET 103 (104)
T ss_dssp HTTTEEEEEC
T ss_pred hCCCcEEEEE
Confidence 54 4666654
No 210
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=98.95 E-value=1.5e-09 Score=131.15 Aligned_cols=96 Identities=16% Similarity=0.270 Sum_probs=76.3
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF 82 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d 82 (1613)
...|||.++.+.. ..++.|++.||||+++.|++||+.. ..+...|+|.+|.+..+.+ .+|+|+|.+.|++
T Consensus 279 ~k~G~L~K~~~~~--~~~~~WkkRwfvL~~~~L~y~k~~~-------~~~~~~i~l~~~~v~~~~~-~~r~~~F~i~t~~ 348 (385)
T 2q13_A 279 RKAGYLNARNKTG--LVSSTWDRQFYFTQGGNLMSQARGD-------VAGGLAMDIDNCSVMAVDC-EDRRYCFQITSFD 348 (385)
T ss_dssp CCEEEEEEC----------CCEEEEEEEETTEEEEECSSC-------SSCEEEEECTTCEEEEECC-TTCSSEEEEECTT
T ss_pred cEEEEEEEecCCC--CCcCCceeEEEEEECCEEEEecCCC-------cCCCceEEccceEEEeccc-cCCCceEEEEeCC
Confidence 3578998875431 1224799999999999999999831 1356789999998877655 5889999999999
Q ss_pred C-CeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 83 G-DAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 83 g-~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
| +.|+|||+|++||+.||.+|+.++.
T Consensus 349 ~~~~~~l~A~s~~e~~~Wi~ai~~~~~ 375 (385)
T 2q13_A 349 GKKSSILQAESKKDHEEWICTINNISK 375 (385)
T ss_dssp SCBCCCEECSSHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 8 8999999999999999999998865
No 211
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=4.4e-09 Score=102.24 Aligned_cols=81 Identities=19% Similarity=0.280 Sum_probs=68.3
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
...+++++.|.. .+|||++.. . . .+++|.+|.++ |+++||++||.|++|||++|.+++++++.++++
T Consensus 9 ~~~~~v~l~~~~--~g~G~~i~~--~----~---~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~ 75 (96)
T 1ujv_A 9 AELMTLTIVKGA--QGFGFTIAD--S----P---TGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILK 75 (96)
T ss_dssp CCCEEEEEECCS--SSSSEEEEE--E----T---TEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHH
T ss_pred ceEEEEEEEeCC--CceeEEEEc--C----C---CCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 345778898866 799999964 1 1 24899999994 889999999999999999999999999999997
Q ss_pred c---CCeEEEEEeecCC
Q psy8107 434 E---ELSLCMMMRSSRT 447 (1613)
Q Consensus 434 ~---~~~l~L~vr~~~~ 447 (1613)
. +..+.|+|+|.+.
T Consensus 76 ~~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 76 DCPIGSETSLIIHRGSG 92 (96)
T ss_dssp HSCTTSEEEEEEECCSS
T ss_pred cCCCCCEEEEEEEECCC
Confidence 5 4789999988654
No 212
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.92 E-value=4e-09 Score=109.63 Aligned_cols=93 Identities=22% Similarity=0.334 Sum_probs=72.0
Q ss_pred eEEEEEEecC--CCCccceEEEEeeccccc------ccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHH
Q psy8107 356 LYQVELQRTT--LDHMWGFSVEAELTENAE------RQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMY 427 (1613)
Q Consensus 356 ~~~v~l~k~~--~~~~~GF~v~~~~~~~~~------~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~ 427 (1613)
.+.|+|.|.+ ...++||++.+-...+.. .+...+++|.+|.|||+|+++||++||.|++|||++|.++++++
T Consensus 24 ~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~ 103 (139)
T 2vz5_A 24 VQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQ 103 (139)
T ss_dssp EEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH
T ss_pred eEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHH
Confidence 4778888765 334899999772111000 01235799999999999999999999999999999999999999
Q ss_pred HHHHHhc--CCeEEEEEeecCCC
Q psy8107 428 LESVLQE--ELSLCMMMRSSRTE 448 (1613)
Q Consensus 428 ~~~ll~~--~~~l~L~vr~~~~~ 448 (1613)
+.++++. +..+.|+|.|.+..
T Consensus 104 ~~~~l~~~~g~~v~l~v~R~g~~ 126 (139)
T 2vz5_A 104 ARKRLTKRSEEVVRLLVTRQSLQ 126 (139)
T ss_dssp HHHHHCCTTCSEEEEEEEECC--
T ss_pred HHHHHHhCCCCEEEEEEEECCEE
Confidence 9999964 37899999987643
No 213
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.91 E-value=2.4e-09 Score=109.17 Aligned_cols=87 Identities=20% Similarity=0.203 Sum_probs=73.9
Q ss_pred ccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCC-CCCCEEEEEcCeecCCCCHHHHHHH
Q psy8107 353 AKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGL-IKGDEIMVINGAIVSDLDMMYLESV 431 (1613)
Q Consensus 353 ~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL-~~GDeIl~vNg~~v~~l~~~~~~~l 431 (1613)
+..++.|++.|... .++||++.. .++ ..+++|.+|.+||+|+++|| ++||+|+.|||+++.+++++++.++
T Consensus 6 ~~~~~~v~l~~~~~-~glG~~~~~--~~~-----~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~ 77 (127)
T 1b8q_A 6 EPNVISVRLFKRKV-GGLGFLVKE--RVS-----KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEV 77 (127)
T ss_dssp CCCSEEEEEECTTT-SCCSCCEEE--CTT-----SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHH
T ss_pred CCceEEEEEEeCCC-CcEeEEEEe--cCC-----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 34678899988653 799999987 221 14599999999999999999 9999999999999999999999999
Q ss_pred HhcC--CeEEEEEeecCC
Q psy8107 432 LQEE--LSLCMMMRSSRT 447 (1613)
Q Consensus 432 l~~~--~~l~L~vr~~~~ 447 (1613)
++.. ..+.|+|+|.+.
T Consensus 78 l~~~~g~~v~l~v~R~g~ 95 (127)
T 1b8q_A 78 LRGIASETHVVLILRGPE 95 (127)
T ss_dssp HHSCCSSCEEEEEECCCC
T ss_pred HHhCCCCeEEEEEEeCCc
Confidence 9653 789999988664
No 214
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.91 E-value=5.4e-09 Score=99.87 Aligned_cols=81 Identities=25% Similarity=0.266 Sum_probs=67.2
Q ss_pred EEEEEEecC-CCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc-
Q psy8107 357 YQVELQRTT-LDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE- 434 (1613)
Q Consensus 357 ~~v~l~k~~-~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~- 434 (1613)
..+.+.+.+ ....+||++.. .. .+++|.+|.|+|+|+++||++||.|+.|||++|.+.++.++.++++.
T Consensus 5 ~~~~~~~~~~~~~~lG~~~~~------~~---~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 75 (90)
T 2eaq_A 5 MRISINQTPGKSLDFGFTIKW------DI---PGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKA 75 (90)
T ss_dssp EEEEEECCTTCSSCCSEEEEE------ET---TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHH
T ss_pred eEEEEEecCCCCCcccEEEEe------cC---CCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhc
Confidence 456666655 33579999875 11 35899999999999999999999999999999988899999999863
Q ss_pred --CCeEEEEEeecC
Q psy8107 435 --ELSLCMMMRSSR 446 (1613)
Q Consensus 435 --~~~l~L~vr~~~ 446 (1613)
+..+.|+|+|.+
T Consensus 76 ~~g~~v~l~v~R~g 89 (90)
T 2eaq_A 76 QETGHLVMDVRRYG 89 (90)
T ss_dssp HHHTEEEEEEEEEC
T ss_pred CCCCEEEEEEEeCC
Confidence 478999998864
No 215
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.91 E-value=6.7e-09 Score=105.25 Aligned_cols=85 Identities=20% Similarity=0.352 Sum_probs=68.8
Q ss_pred EEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc-
Q psy8107 357 YQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE- 434 (1613)
Q Consensus 357 ~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~- 434 (1613)
..|++.+.. .++||++.+ ..+. .....+++|.+|.|+|+|+++| |++||+|++|||++|.+++++++.++++.
T Consensus 32 ~~v~l~~~~--~~lG~~l~~--~~~~-~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 106 (121)
T 2kom_A 32 LNIQLKKGT--EGLGFSITS--RDVT-IGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRST 106 (121)
T ss_dssp EEEEEECCT--TCCCEEEEC--CCCS-SSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred EEEEEEcCC--CcEeEEEEe--ccCC-cCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 556676654 789999987 2211 0112469999999999999999 99999999999999999999999999965
Q ss_pred --CCeEEEEEeecC
Q psy8107 435 --ELSLCMMMRSSR 446 (1613)
Q Consensus 435 --~~~l~L~vr~~~ 446 (1613)
+..+.|+|+|.+
T Consensus 107 ~~g~~v~l~v~R~g 120 (121)
T 2kom_A 107 KMEGTVSLLVFRQE 120 (121)
T ss_dssp CSSCEEEEEEEECC
T ss_pred CCCCEEEEEEEeCC
Confidence 478999998754
No 216
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=1.4e-09 Score=108.27 Aligned_cols=84 Identities=21% Similarity=0.285 Sum_probs=71.6
Q ss_pred ccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHH
Q psy8107 353 AKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESV 431 (1613)
Q Consensus 353 ~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~l 431 (1613)
+..++.|+|.|.. .+|||++.+ .. +..+++|.+|.++|+|+++| |++||+|+.|||++|.++++.++..+
T Consensus 13 ~~~~~~v~l~k~~--~glG~~l~~--~~-----~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~ 83 (113)
T 1um7_A 13 AREPRKIILHKGS--TGLGFNIVG--GE-----DGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAA 83 (113)
T ss_dssp CCSEEEEEEECCS--SCSSBCCBC--CS-----TTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHH
T ss_pred CCceEEEEEEECC--CcccEEEEe--cc-----CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3467899999976 789999977 22 12568999999999999999 99999999999999999999999999
Q ss_pred HhcC-CeEEEEEeec
Q psy8107 432 LQEE-LSLCMMMRSS 445 (1613)
Q Consensus 432 l~~~-~~l~L~vr~~ 445 (1613)
++.. ..+.|+|+|.
T Consensus 84 ~~~~~~~v~l~v~r~ 98 (113)
T 1um7_A 84 LKRAGQSVTIVAQYR 98 (113)
T ss_dssp HHSCCSEEEEEEECC
T ss_pred HHhCCCcEEEEEEEC
Confidence 8643 7889998764
No 217
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=7.6e-09 Score=103.99 Aligned_cols=85 Identities=19% Similarity=0.247 Sum_probs=70.9
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
..++.|++.|.. .++||++.. +.. .+++|.+|.|+|+|+++||++||+|++|||++|.++++.+...+++
T Consensus 18 ~~~~~v~l~~~~--~~lG~~~~~------~~~--~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~ 87 (117)
T 1uit_A 18 EEPRHVKVQKGS--EPLGISIVS------GEK--GGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIG 87 (117)
T ss_dssp CCCEEEEEECSS--CCCCEEEEE------CTT--SCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTT
T ss_pred CCCEEEEEEeCC--CCccEEEEc------cCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 356788998876 789999987 211 3699999999999999999999999999999999999988887664
Q ss_pred -cCCeEEEEEeecCCC
Q psy8107 434 -EELSLCMMMRSSRTE 448 (1613)
Q Consensus 434 -~~~~l~L~vr~~~~~ 448 (1613)
.+..+.|+|+|.+..
T Consensus 88 ~~g~~v~l~v~r~~~~ 103 (117)
T 1uit_A 88 QQCDTITILAQYNPHV 103 (117)
T ss_dssp SCCSEEEEEECCCSCC
T ss_pred cCCCeEEEEEEECCch
Confidence 348899999876543
No 218
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.90 E-value=3.5e-09 Score=107.98 Aligned_cols=82 Identities=15% Similarity=0.231 Sum_probs=69.5
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE 435 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~ 435 (1613)
.+.|++.|.. .+|||.+.. .. . ..+++|.+|.++|+|+++||++||+|+.|||++|.++++.++.++++..
T Consensus 10 ~r~v~l~~~~--~g~G~~l~~--~~----~-~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 80 (128)
T 2kjd_A 10 PRLCTMKKGP--SGYGFNLHS--DK----S-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG 80 (128)
T ss_dssp CEEEEEECCS--SSCCEEEEE--CS----S-SCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred cEEEEEecCC--CcccEEEEe--cC----C-CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4778998876 689999988 22 1 1369999999999999999999999999999999999999999999653
Q ss_pred --CeEEEEEeecC
Q psy8107 436 --LSLCMMMRSSR 446 (1613)
Q Consensus 436 --~~l~L~vr~~~ 446 (1613)
..+.|+|.|.+
T Consensus 81 ~~~~~~l~v~R~g 93 (128)
T 2kjd_A 81 GDETKLLVVDRET 93 (128)
T ss_dssp CSEEEEEEECHHH
T ss_pred CCCEEEEEEEeCC
Confidence 56778887654
No 219
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.90 E-value=5.4e-09 Score=113.46 Aligned_cols=88 Identities=17% Similarity=0.283 Sum_probs=72.5
Q ss_pred eEEEEEEecCCCCccceEEEEeeccccc-ccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAE-RQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~-~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
.+.|++.|.+ .+|||++.+ +.+.. ..+..++||.+|.|+|+|+++| |++||+|+.|||++|.++++.++..+++
T Consensus 6 ~~~v~l~~~~--~~lG~~i~~--g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 81 (196)
T 3gsl_A 6 YEEITLERGN--SGLGFSIAG--GTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALK 81 (196)
T ss_dssp EEEEEEECBT--TBSSEEEEC--CTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEEECC--CCCCEEEEc--ccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4788999976 689999988 22100 0113679999999999999999 9999999999999999999999998886
Q ss_pred c-CCeEEEEEeecCC
Q psy8107 434 E-ELSLCMMMRSSRT 447 (1613)
Q Consensus 434 ~-~~~l~L~vr~~~~ 447 (1613)
. +..+.|+|.|.+.
T Consensus 82 ~~g~~v~l~v~r~~~ 96 (196)
T 3gsl_A 82 EAGSIVRLYVMRRKP 96 (196)
T ss_dssp TSCSEEEEEEEEECC
T ss_pred hCCCcEEEEEEecCC
Confidence 4 3889999988654
No 220
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.90 E-value=2.5e-09 Score=104.59 Aligned_cols=79 Identities=16% Similarity=0.246 Sum_probs=67.0
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE 435 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~ 435 (1613)
...+++.|.. .+|||.+.. + .+++|.+|.|+|+|+++||++||+|+.|||++|.++++.++.++++..
T Consensus 16 ~~~v~l~~~~--~g~G~~~~~------~----~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 83 (100)
T 1whd_A 16 KLQITIRRGK--DGFGFTICC------D----SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSC 83 (100)
T ss_dssp EEEEEEECCS--SSSSCBCCC------S----SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred eEEEEEECCC--CeeeEEEeC------C----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3567777755 789998866 1 238999999999999999999999999999999999999999999643
Q ss_pred -CeEEEEEeecC
Q psy8107 436 -LSLCMMMRSSR 446 (1613)
Q Consensus 436 -~~l~L~vr~~~ 446 (1613)
..+.|+|+|..
T Consensus 84 ~~~v~l~v~R~~ 95 (100)
T 1whd_A 84 PSEIILLVWRVS 95 (100)
T ss_dssp SSEEEEEEEECC
T ss_pred CCeEEEEEEECC
Confidence 66999998754
No 221
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.90 E-value=1e-09 Score=107.94 Aligned_cols=74 Identities=20% Similarity=0.342 Sum_probs=64.4
Q ss_pred CccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc-CCeEEEEEeecC
Q psy8107 368 HMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE-ELSLCMMMRSSR 446 (1613)
Q Consensus 368 ~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~-~~~l~L~vr~~~ 446 (1613)
..|||++.+ +.....+++|.+|.|+|+|+++||++||+|+.|||++|.+++++++.++++. ...+.|+|+|.+
T Consensus 15 ~~lG~~l~~------g~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g 88 (103)
T 1v5l_A 15 APWGFRLSG------GIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAE 88 (103)
T ss_dssp SCCSBCCEE------ETTTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECCCT
T ss_pred CCcCEEEec------cccCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECC
Confidence 689999987 2222246999999999999999999999999999999999999999999965 489999998765
Q ss_pred C
Q psy8107 447 T 447 (1613)
Q Consensus 447 ~ 447 (1613)
.
T Consensus 89 ~ 89 (103)
T 1v5l_A 89 T 89 (103)
T ss_dssp T
T ss_pred e
Confidence 4
No 222
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=98.88 E-value=2.2e-09 Score=130.62 Aligned_cols=97 Identities=19% Similarity=0.312 Sum_probs=77.6
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF 82 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d 82 (1613)
...|||.++..+.. .++.|+++||||+|+.|++|+.... .+...++|..|.+..+.+. +|+|+|.+.|++
T Consensus 302 ~k~G~L~k~~~~g~--~~~~W~rrwfvl~~~~l~y~~~~~~-------~~~~~~~l~~~~v~~~~~~-~r~~cF~i~~~~ 371 (407)
T 4h8s_A 302 QKAGYLNLRNKTGL--VTTTWERLYFFTQGGNLMCQPRGAV-------AGGLIQDLDNCSVMAVDCE-DRRYCFQITTPN 371 (407)
T ss_dssp CCEEEEEEEEECSS--SCEEEEEEEEEECSSCEECCCTTCS-------SCCCCBCSSCCEEEEECCT-TCSSEEEEECTT
T ss_pred eeeceeeeeccCCC--CCCCceEEEEEEECCEEEEEeCCCC-------CCCeEEECCceEEEECCCC-CCCceEEEEecC
Confidence 35789987643221 2457999999999999999986532 2445788899988776554 789999999998
Q ss_pred C-CeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 83 G-DAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 83 g-~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
+ +.|.|||+|++||+.||.+|+.|++.
T Consensus 372 ~~~~~~l~A~s~~e~~~Wi~ai~~a~~~ 399 (407)
T 4h8s_A 372 GKSGIILQAESRKENEEWICAINNISRQ 399 (407)
T ss_dssp SSCCEEEECSSSHHHHHHHHHHHHHHSC
T ss_pred CCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 6 58999999999999999999999764
No 223
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.87 E-value=6.4e-09 Score=114.06 Aligned_cols=87 Identities=20% Similarity=0.162 Sum_probs=74.2
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhc-CCCCCCEEEEEcCeecCCCCHHHHHHHH
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHN-GLIKGDEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~-GL~~GDeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
+..+.|+|.|.+. ++|||++.+ +.....+++|++|.++|+|+++ ||++||+|+.|||++|.++++.++..++
T Consensus 6 ~~~~~v~l~~~~~-~~lG~~i~~------~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~ 78 (200)
T 2qt5_A 6 KGSTVVELMKKEG-TTLGLTVSG------GIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLL 78 (200)
T ss_dssp EEEEEEEEECCTT-CCCCEEEEC------CTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CCCEEEEEEeCCC-CCCCEEEec------ccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3568899988764 899999988 3233345899999999999999 9999999999999999999999999998
Q ss_pred hc-CCeEEEEEeecCC
Q psy8107 433 QE-ELSLCMMMRSSRT 447 (1613)
Q Consensus 433 ~~-~~~l~L~vr~~~~ 447 (1613)
+. +..+.|+|.|.+.
T Consensus 79 ~~~g~~v~l~v~R~~~ 94 (200)
T 2qt5_A 79 KNVGERVVLEVEYELP 94 (200)
T ss_dssp HTCCSEEEEEEEEECC
T ss_pred HhCCCeEEEEEeccCC
Confidence 53 3789999988754
No 224
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=98.87 E-value=3e-09 Score=121.97 Aligned_cols=93 Identities=15% Similarity=0.293 Sum_probs=74.7
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCC-------eEEEecCCCcCCCCCCCCCCceeEeCceEEe-eCCCCCCCCce
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGT-------TLLFYPCDSREGRSVDAAPKHLIIVDGAIMQ-PIPEHPKRDYI 75 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~-------~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~-~a~dy~KK~nV 75 (1613)
..|||.++ ++||+.|+||++. .|++||++..... ....|.+.|.|.+|... ...| .|++|+
T Consensus 12 k~G~L~K~---------K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~-~~~~p~g~I~L~~~~~V~~~~~-~~~~~~ 80 (264)
T 1qqg_A 12 KVGYLRKP---------KSMHKRFFVLRAASEAGGPARLEYYENEKKWRH-KSSAPKRSIPLESCFNINKRAD-SKNKHL 80 (264)
T ss_dssp EEEEEECT---------TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHT-TCSCCSEEEEGGGEEEEEEECC-SSCSSE
T ss_pred EEEEEEEC---------CCCEeEEEEEECCCCCCCCCEEEEECCCccccc-cccCcceEEEeeceEEEEeccC-CCCCcE
Confidence 56888655 4699999999998 9999998754211 11368889999998643 3344 689999
Q ss_pred EEEEcCCCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 76 FCLSTAFGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 76 F~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
|.|.|+ .+.|+|+|+|++||+.||++|+.++.
T Consensus 81 F~I~t~-~rty~l~A~se~e~~~Wi~aL~~~~~ 112 (264)
T 1qqg_A 81 VALYTR-DEHFAIAADSEAEQDSWYQALLQLHN 112 (264)
T ss_dssp EEEEES-SCEEEEECSSHHHHHHHHHHHHHHC-
T ss_pred EEEEEC-CEEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 999988 68999999999999999999998865
No 225
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.86 E-value=8.4e-09 Score=100.75 Aligned_cols=77 Identities=23% Similarity=0.313 Sum_probs=65.5
Q ss_pred EEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc--
Q psy8107 357 YQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE-- 434 (1613)
Q Consensus 357 ~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~-- 434 (1613)
..+-|.+.. .+|||.+.. .. .+..|.+|.|||||++|||++||+|+.|||++|...+++|+.+.++.
T Consensus 19 ~~l~l~~~~--~g~G~~l~~--~~-------~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~ 87 (101)
T 3qik_A 19 KRLLILPQE--EDYGFDIEE--KN-------KAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSF 87 (101)
T ss_dssp EEEEECCCS--SSSSEEEEE--ET-------TEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHH
T ss_pred CeEEEEeCC--CcccEEEEc--cC-------CCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhh
Confidence 566676654 899999987 11 23799999999999999999999999999999999999999999964
Q ss_pred --CCeEEEEEee
Q psy8107 435 --ELSLCMMMRS 444 (1613)
Q Consensus 435 --~~~l~L~vr~ 444 (1613)
++.+.|.|..
T Consensus 88 ~~g~~v~LLV~~ 99 (101)
T 3qik_A 88 CSRRPLRLLVAT 99 (101)
T ss_dssp HTTCCEEEEEEC
T ss_pred ccCCeEEEEEec
Confidence 5889998864
No 226
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.86 E-value=1.3e-08 Score=97.44 Aligned_cols=80 Identities=18% Similarity=0.426 Sum_probs=66.5
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
+.+|++.+......|||.+.. +++|++|.++|+|+++| |++||.|+.|||++|.++++.++.++++.
T Consensus 3 ~~~v~~~~~~~~~~~g~~~~~------------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 70 (92)
T 3cyy_A 3 PTKVTLVKSAKNEEYGLRLAS------------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIER 70 (92)
T ss_dssp CEEEEEECSSTTSCCCEEEEE------------EEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred cEEEEEEeCCCCCCCCEEEeC------------CEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 456777777666889997742 38999999999999999 99999999999999999999999999964
Q ss_pred C-CeEEEEEeecCC
Q psy8107 435 E-LSLCMMMRSSRT 447 (1613)
Q Consensus 435 ~-~~l~L~vr~~~~ 447 (1613)
. ..+.|+|.|.+.
T Consensus 71 ~~~~v~l~v~r~g~ 84 (92)
T 3cyy_A 71 SKGKLKMVVQRDER 84 (92)
T ss_dssp TTTEEEEEEEC---
T ss_pred CCCcEEEEEEeCCc
Confidence 3 688999987553
No 227
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.86 E-value=1e-08 Score=112.24 Aligned_cols=95 Identities=20% Similarity=0.228 Sum_probs=77.2
Q ss_pred ecccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHH
Q psy8107 351 VCAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLE 429 (1613)
Q Consensus 351 v~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~ 429 (1613)
|+...++.|+|.|.+. .+|||++.+.... ......+++|++|.|+|+|+++| |++||+|+.|||++|.++++.++.
T Consensus 2 ~~~~~~~~v~l~~~~~-~glG~~i~~~~~~--~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~ 78 (196)
T 1p1d_A 2 VVHTETTEVVLTADPV-TGFGIQLQGSVFA--TETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEAN 78 (196)
T ss_dssp CCCCEEEEEEEECBTT-TBCCCEEEECSSC--SSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHH
T ss_pred CCccEEEEEEEEeCCC-CccCEEEeCCcCC--CCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4555778899999764 8999999982211 11123568999999999999999 999999999999999999999999
Q ss_pred HHHhcC---CeEEEEEeecCCC
Q psy8107 430 SVLQEE---LSLCMMMRSSRTE 448 (1613)
Q Consensus 430 ~ll~~~---~~l~L~vr~~~~~ 448 (1613)
++++.. ..+.|+|.|.+..
T Consensus 79 ~~l~~~~~g~~v~l~v~R~~~~ 100 (196)
T 1p1d_A 79 QLLRDSSITSKVTLEIEFDVAE 100 (196)
T ss_dssp HHHHTCCSSSEEEEEEEECSCS
T ss_pred HHHHhCCCCCeEEEEEEecCCC
Confidence 999643 6899999887653
No 228
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=98.84 E-value=1.2e-08 Score=106.07 Aligned_cols=100 Identities=16% Similarity=0.212 Sum_probs=76.1
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCc---------CC------------------C-CCCC-----
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSR---------EG------------------R-SVDA----- 50 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~---------~~------------------~-~~~~----- 50 (1613)
.+|+|..|..- .+.|+++||||++..||+++.... .. . ....
T Consensus 3 k~G~L~~~~~~-----~~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~ 77 (150)
T 2fjl_A 3 KNGILYLEDPV-----NHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPERE 77 (150)
T ss_dssp EEEEEEEEETT-----TTEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCS
T ss_pred cceEEEeecCC-----CCCceEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHh
Confidence 45777777531 356999999999999999982221 00 0 0000
Q ss_pred ----------CCCceeEeCceEEeeCC-CCCCCCceEEEEcCCC--CeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 51 ----------APKHLIIVDGAIMQPIP-EHPKRDYIFCLSTAFG--DAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 51 ----------~p~~~I~l~~~~~~~a~-dy~KK~nVF~L~t~dg--~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
-.++.|+|.+|.++..+ ....|++||++.+++. +.|.|.|++++||+.|+++|..|+.
T Consensus 78 ~l~E~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 78 HLDENSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp SSCTTTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cccccccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 11689999999999876 4568999999998853 4799999999999999999999874
No 229
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.84 E-value=5.4e-09 Score=106.85 Aligned_cols=80 Identities=20% Similarity=0.186 Sum_probs=69.2
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
.++++++.|.. .++||++.. .. ..++|.+|.|||+|+++| |++||+|+.|||++|.+.+++++.++++
T Consensus 27 ~~~~~~l~k~~--~glG~~i~~------~~---~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~ 95 (126)
T 1wif_A 27 KVIQTKLTVGN--LGLGLVVIQ------NG---PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQ 95 (126)
T ss_dssp CEEEEEEECCT--TCCCCCEEE------ET---TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHT
T ss_pred ceEEEEEecCC--ceEeEEEEc------CC---CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Confidence 45677887765 789999876 11 358999999999999999 9999999999999999999999999997
Q ss_pred c---CCeEEEEEeec
Q psy8107 434 E---ELSLCMMMRSS 445 (1613)
Q Consensus 434 ~---~~~l~L~vr~~ 445 (1613)
+ +..+.|+|.|.
T Consensus 96 ~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 96 NITIGTVLQIKAYRG 110 (126)
T ss_dssp SCCSSCEEEEEEESS
T ss_pred cCCCCCEEEEEEEEC
Confidence 5 37899999875
No 230
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.84 E-value=2.6e-09 Score=106.84 Aligned_cols=81 Identities=17% Similarity=0.126 Sum_probs=68.2
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE 435 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~ 435 (1613)
.++|+|.|.+ .++||.+.+ + ..++|.+|.++|+|+++||++||.|+.|||++|.+++++++.++++..
T Consensus 16 ~r~v~l~~~~--~~~G~~l~~------~----~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~ 83 (111)
T 1vae_A 16 PRGIHFTVEE--GDLGFTLRG------N----TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSF 83 (111)
T ss_dssp CCCCCEECCS--SCCSCCEES------S----SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHT
T ss_pred CeEEEEEcCC--CcccEEEeC------C----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4678888854 899999865 1 237999999999999999999999999999999999999999999644
Q ss_pred --CeEEEEEeecCCC
Q psy8107 436 --LSLCMMMRSSRTE 448 (1613)
Q Consensus 436 --~~l~L~vr~~~~~ 448 (1613)
..+.|+|.+....
T Consensus 84 ~~~~v~l~V~~~~~~ 98 (111)
T 1vae_A 84 GGEEVEMKVVSLLDS 98 (111)
T ss_dssp TTSEECEEEECEECC
T ss_pred CCceEEEEEEecCCC
Confidence 4699999865443
No 231
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.83 E-value=9.1e-09 Score=104.85 Aligned_cols=81 Identities=16% Similarity=0.266 Sum_probs=65.9
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
.++.+++.+ .+++||.+.. +.. .+++|.+|.|+|+|+++||++||+|+.|||++|.+++++++.+++..
T Consensus 29 ~~~~~~~~~---~~~lG~~l~~------~~~--~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 97 (124)
T 3tsv_A 29 SMKLVKFRK---GDSVGLRLAG------GND--VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLD 97 (124)
T ss_dssp CCEEEEEEC---SSCCCEEEEE------CTT--SCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred CeEEEEcCC---CCceeEEEec------CCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 344444443 2689999977 222 45999999999999999999999999999999999999999998753
Q ss_pred ---CCeEEEEEeecC
Q psy8107 435 ---ELSLCMMMRSSR 446 (1613)
Q Consensus 435 ---~~~l~L~vr~~~ 446 (1613)
+..+.|+|+|.+
T Consensus 98 ~~~g~~v~l~v~R~~ 112 (124)
T 3tsv_A 98 LPKGEEVTILAQKKK 112 (124)
T ss_dssp SCTTCEEEEEEEECH
T ss_pred cCCCCEEEEEEEECC
Confidence 378999998754
No 232
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.83 E-value=9.8e-09 Score=103.76 Aligned_cols=92 Identities=22% Similarity=0.288 Sum_probs=71.6
Q ss_pred cccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecC--CChhhhcCCCCCCEEEEEcCeecCCCCHHHHH
Q psy8107 352 CAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVED--KSVAMHNGLIKGDEIMVINGAIVSDLDMMYLE 429 (1613)
Q Consensus 352 ~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~--gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~ 429 (1613)
+|..+..+++.+.. .+.+||.|.. ..+. .....+++|.+|.+ +++|+++||++||.|+.|||++|.+++++++.
T Consensus 12 ~~~~v~l~~~~~~~-~g~~G~~v~l--~~~~-~~~~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~ 87 (118)
T 2yub_A 12 LPYSVTLISMPATT-ECRRGFSVTV--ESAS-SNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVE 87 (118)
T ss_dssp SCCEEEEEEECSCS-SSSCSSEEEE--ECTT-SSSCCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHH
T ss_pred CCceeEEeccCCcc-CCCceEEEEe--cccc-ccCCCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHH
Confidence 45444555554444 3678999985 3211 12236799999999 99999999999999999999999999999999
Q ss_pred HHHhc-CCeEEEEEeecCC
Q psy8107 430 SVLQE-ELSLCMMMRSSRT 447 (1613)
Q Consensus 430 ~ll~~-~~~l~L~vr~~~~ 447 (1613)
++++. +..+.|+|+|.+.
T Consensus 88 ~~l~~~g~~v~l~v~R~g~ 106 (118)
T 2yub_A 88 DAIKQTSQTLQLLIEHDPV 106 (118)
T ss_dssp HHHHCCSSCEEEEEEECSS
T ss_pred HHHHhCCCEEEEEEEECCE
Confidence 99975 4789999988654
No 233
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.83 E-value=1.9e-08 Score=93.67 Aligned_cols=72 Identities=17% Similarity=0.447 Sum_probs=60.5
Q ss_pred EecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhcC-CeEE
Q psy8107 362 QRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQEE-LSLC 439 (1613)
Q Consensus 362 ~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~~-~~l~ 439 (1613)
.+......|||.+.. +++|++|.|+|+|+++| |++||.|+.|||++|.++++.++.+++++. ..+.
T Consensus 7 ~~~~~~~~~g~~~~~------------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 74 (81)
T 2rcz_A 7 VKSRKNEEYGLRLAS------------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLK 74 (81)
T ss_dssp ECCSTTCCCCEEEEE------------EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEE
T ss_pred EECCCCCCCCEEEeC------------CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEE
Confidence 334445789997752 27999999999999999 999999999999999999999999999643 6788
Q ss_pred EEEeec
Q psy8107 440 MMMRSS 445 (1613)
Q Consensus 440 L~vr~~ 445 (1613)
|+|+|.
T Consensus 75 l~v~R~ 80 (81)
T 2rcz_A 75 MVVQRD 80 (81)
T ss_dssp EEEEC-
T ss_pred EEEEeC
Confidence 888764
No 234
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.80 E-value=1.2e-08 Score=113.52 Aligned_cols=82 Identities=15% Similarity=0.225 Sum_probs=69.5
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc-
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE- 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~- 434 (1613)
.+.|+|.|.. ++|||.+.+ +. +..+++|..|.+||+|+++||++||+|+.|||++|.++++.++.++++.
T Consensus 10 ~r~v~l~k~~--~glG~~l~~--~~-----~~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~ 80 (216)
T 2krg_A 10 PRLCTMKKGP--SGYGFNLHS--DK-----SKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG 80 (216)
T ss_dssp CEEEEEECCS--SSSCEEECC--CS-----SSCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHH
T ss_pred eEEEEEEeCC--CCceEEEEe--cC-----CCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 4788898876 689999977 22 1146899999999999999999999999999999999999999999964
Q ss_pred CCeE-EEEEeecC
Q psy8107 435 ELSL-CMMMRSSR 446 (1613)
Q Consensus 435 ~~~l-~L~vr~~~ 446 (1613)
+..+ .|+|+|.+
T Consensus 81 g~~v~~l~V~R~g 93 (216)
T 2krg_A 81 GDETKLLVVDRET 93 (216)
T ss_dssp CSEEEEEECCHHH
T ss_pred CCeEEEEEEEECC
Confidence 4678 88887654
No 235
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.80 E-value=1.4e-08 Score=111.51 Aligned_cols=93 Identities=15% Similarity=0.176 Sum_probs=76.2
Q ss_pred eeecccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCC--CCH
Q psy8107 349 VEVCAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSD--LDM 425 (1613)
Q Consensus 349 iEv~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~--l~~ 425 (1613)
.++-|.....|++.|.. .++||++.+ +.+ .....+++|.+|.|+|+|+++| |++||+|++|||++|.+ +++
T Consensus 12 ~~~~~~~~~~v~~~~~~--~~lG~~i~~--g~~--~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 85 (206)
T 3r0h_A 12 AEIKPNKKILIELKVEK--KPMGVIVCG--GKN--NHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTT 85 (206)
T ss_dssp CCCCTTSCEEEEEECTT--SCCCEEEEC--CSS--SSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCH
T ss_pred CCCCCCCEEEEEEEeCC--CCcCEEEec--ccC--CCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCH
Confidence 45667778889999865 899999987 221 1111469999999999999998 99999999999999999 999
Q ss_pred HHHHHHHhcC-Ce-EEEEEeecCC
Q psy8107 426 MYLESVLQEE-LS-LCMMMRSSRT 447 (1613)
Q Consensus 426 ~~~~~ll~~~-~~-l~L~vr~~~~ 447 (1613)
.++..+++.. .. +.|+|.|.+.
T Consensus 86 ~~~~~~~~~~~~~~v~l~v~R~~~ 109 (206)
T 3r0h_A 86 LKVHQLFHTTYEKAVTLTVFRADP 109 (206)
T ss_dssp HHHHHHHHSCCSSEEEEEEECCSS
T ss_pred HHHHHHHHhcCCCceEEEEEeccc
Confidence 9999998653 44 9999987654
No 236
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=98.76 E-value=1.2e-08 Score=103.10 Aligned_cols=100 Identities=19% Similarity=0.367 Sum_probs=73.2
Q ss_pred ccccceEEe-cccccccccCC-CceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEE-e-------eCCCCCC
Q psy8107 2 LSVKKWLLR-KKHQIELARKR-GWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIM-Q-------PIPEHPK 71 (1613)
Q Consensus 2 L~~Kg~L~~-K~~k~~~~~~R-~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~-~-------~a~dy~K 71 (1613)
+++.|||-. |+.. .++ +|++.||||++..|++|+++... +...|...|+|..... + ...+...
T Consensus 1 ~~~eGwl~~pk~~~----~~k~~Wkkr~~vL~~~kL~~y~~~~~~---~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~ 73 (117)
T 2rov_A 1 SRLEGWLSLPVRNN----TKKFGWVKKYVIVSSKKILFYDSEQDK---EQSNPYMVLDIDKLFHVRPVTQTDVYRADAKE 73 (117)
T ss_dssp CCSEEEEECCCCSS----SSCCCCCEEEEEEETTEEEEESCHHHH---HTTCCSEEECGGGEEEEEECCTTTCSSSCTTT
T ss_pred CceEEEEEeecCCC----ccCCCcEEEEEEEECCEEEEEECCCCc---ccCCceEEEECcccEEEEEccccccccccccc
Confidence 367899975 3321 135 79999999999999999986321 1235677888866544 1 1123334
Q ss_pred CCceEEEEcCC-----CCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 72 RDYIFCLSTAF-----GDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 72 K~nVF~L~t~d-----g~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
.+++|++.+++ .+.++|+|+|++|++.||.+|+.++.
T Consensus 74 ~p~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 74 IPRIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp GGGEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred CCcEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 58999998753 57999999999999999999997753
No 237
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.75 E-value=1.4e-08 Score=103.74 Aligned_cols=87 Identities=17% Similarity=0.352 Sum_probs=73.4
Q ss_pred ccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC--C-CeEEeecCCHH
Q psy8107 18 ARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF--G-DAYLFQAPCQV 94 (1613)
Q Consensus 18 ~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d--g-~~yLFQA~~~~ 94 (1613)
...++||++|+||+|+.|++||++.... ..|-+.|+|.||.+++.....++++.|+|..+. | ++|.|-|+|++
T Consensus 23 ~tlK~~KrrWFvlk~~~L~YyK~kee~~----~ePig~I~L~gceV~pd~~~~~~kf~ikl~iPs~~g~r~y~l~cdsEe 98 (137)
T 2ys3_A 23 LTLKGYRQHWVVFKETTLSYYKSQDEAP----GDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQ 98 (137)
T ss_dssp CCSSSSCCCEEEECSSCEEEESSTTTTT----SCCSCCBCTTTCEEEECCBGGGTBEEEEEEEECSSSEEEEEEEESSHH
T ss_pred cccccceeEEEEEeCCEEEEECCchhcc----CCCceEEECCCCEEeccccccCCceEEEEEccCCCCceEEEEECCCHH
Confidence 3457899999999999999999875321 357789999999988887667889999888763 4 88999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy8107 95 ELENWVNSIHSACA 108 (1613)
Q Consensus 95 em~~Wi~~I~~aaa 108 (1613)
|+..|+.+++.|+.
T Consensus 99 qy~~WMaA~rlAsk 112 (137)
T 2ys3_A 99 QYARWMAGCRLASK 112 (137)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998864
No 238
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=98.75 E-value=1.5e-08 Score=117.20 Aligned_cols=93 Identities=17% Similarity=0.241 Sum_probs=70.1
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeE---eCceEEeeCCC-----CCCCCc
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLII---VDGAIMQPIPE-----HPKRDY 74 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~---l~~~~~~~a~d-----y~KK~n 74 (1613)
++.|||.+|++. +++||+.||||+|+.||+|+++... .+.+.|. +..+.+....+ ...++|
T Consensus 169 ~~~G~L~k~~~~-----~k~WkkR~fvL~~~~L~yyk~~~~~------~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~ 237 (291)
T 3tca_A 169 ELEGALYLKEDG-----KKSWKRRYFLLRASGIYYVPKGKTK------TSRDLACFIQFENVNIYYGIQCKMKYKAPTDH 237 (291)
T ss_dssp CCEEEEEEECTT-----SSCEEEEEEEECSSEEEECCTTCCS------STTTCEEEEEGGGCEEEEECSHHHHHCCSSSC
T ss_pred ceEEEEEEeCCC-----CCCceEEEEEEeCCEEEEEecCccc------cccCceeeccceeEEEEecCccccccCCCCCe
Confidence 467999987653 3679999999999999999987432 2344444 44444443332 345789
Q ss_pred eEEEEcCCC-----CeEEeecCCHHHHHHHHHHHHHH
Q psy8107 75 IFCLSTAFG-----DAYLFQAPCQVELENWVNSIHSA 106 (1613)
Q Consensus 75 VF~L~t~dg-----~~yLFQA~~~~em~~Wi~~I~~a 106 (1613)
.|.|.+++. ..|+|+|+|++||+.||++|..|
T Consensus 238 ~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~A 274 (291)
T 3tca_A 238 CFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIA 274 (291)
T ss_dssp EEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHHHH
Confidence 999998764 46999999999999999999977
No 239
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.75 E-value=3.7e-08 Score=106.84 Aligned_cols=89 Identities=17% Similarity=0.299 Sum_probs=70.7
Q ss_pred eEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 356 LYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 356 ~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
+..+.+.+.. .++||.+.+..... ......+++|.+|.|+|+|+++| |++||.|++|||++|.+++++++.++++.
T Consensus 101 ~~~v~l~~~~--~~lG~~~~~~~~~~-~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 177 (196)
T 3gsl_A 101 VMEIKLIKGP--KGLGFSIAGGVGNQ-HIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKN 177 (196)
T ss_dssp EEEEEEEEBT--TBSCEEEEESBTSC-SBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHS
T ss_pred cEEEEEecCC--CCceEEEEccCCCc-CCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHc
Confidence 4456676765 58999998721110 01112468999999999999999 99999999999999999999999999965
Q ss_pred C-CeEEEEEeecCC
Q psy8107 435 E-LSLCMMMRSSRT 447 (1613)
Q Consensus 435 ~-~~l~L~vr~~~~ 447 (1613)
. +.+.|+|.|.+.
T Consensus 178 ~~~~v~l~v~R~~~ 191 (196)
T 3gsl_A 178 TYDVVYLKVAKPSN 191 (196)
T ss_dssp CCEEEEEEEEEESC
T ss_pred CCCeEEEEEeCCCC
Confidence 4 789999988654
No 240
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.73 E-value=2.7e-08 Score=108.43 Aligned_cols=77 Identities=23% Similarity=0.287 Sum_probs=62.9
Q ss_pred CCccceEEEEeecc--cccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC-CeEEEEEe
Q psy8107 367 DHMWGFSVEAELTE--NAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE-LSLCMMMR 443 (1613)
Q Consensus 367 ~~~~GF~v~~~~~~--~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~-~~l~L~vr 443 (1613)
+++|||++.+..+- ..-.+...+++|++|.|||+|++ ||++||.|++|||++|.++++.++..+++.. ..+.|+|.
T Consensus 1 ~~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 79 (195)
T 2qbw_A 1 SPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV 79 (195)
T ss_dssp CCCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CCcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 37899999993210 00001236799999999999999 9999999999999999999999999999654 78999998
Q ss_pred e
Q psy8107 444 S 444 (1613)
Q Consensus 444 ~ 444 (1613)
|
T Consensus 80 r 80 (195)
T 2qbw_A 80 R 80 (195)
T ss_dssp E
T ss_pred E
Confidence 8
No 241
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.70 E-value=2.2e-08 Score=101.88 Aligned_cols=88 Identities=24% Similarity=0.420 Sum_probs=69.5
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
..+.+++.|.....++||.+.. .... ....+++|.+|.++|+|+++| |++||.|+.|||++|. ++.++.++++
T Consensus 19 ~~~~~~~~~~~~~~~lG~~~~~--~~~~--~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~ 92 (124)
T 1wh1_A 19 ELEEVDLYRMNSQDKLGLTVCY--RTDD--EDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLT 92 (124)
T ss_dssp EECCBCCCCSSTTCCCCEEEEC--CCCC--SSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHT
T ss_pred eEEEEEEEecCCCCcccEEEEe--cCCC--CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHH
Confidence 3355666677655789999987 2211 122579999999999999999 9999999999999998 5889999996
Q ss_pred cC--CeEEEEEeecCCC
Q psy8107 434 EE--LSLCMMMRSSRTE 448 (1613)
Q Consensus 434 ~~--~~l~L~vr~~~~~ 448 (1613)
.. ..+.|+|+|.+..
T Consensus 93 ~~~g~~v~l~v~R~g~~ 109 (124)
T 1wh1_A 93 SEENKNFSLLIARPELQ 109 (124)
T ss_dssp CSSCCSCCEEEEECSSC
T ss_pred hCCCCEEEEEEEECCEE
Confidence 53 6889999887643
No 242
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.69 E-value=3.6e-08 Score=121.01 Aligned_cols=81 Identities=16% Similarity=0.261 Sum_probs=71.1
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
+++.|++.|. +++||++.+ +.. .++||++|.+||+|+++||++||+|++|||++|.+++++++..+++.
T Consensus 1 ~~r~V~l~k~---~~lG~~i~g------g~~--~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~ 69 (468)
T 3shw_A 1 SMKLVKFRKG---DSVGLRLAG------GND--VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLD 69 (468)
T ss_dssp CEEEEEEECC---SSCCEEEEE------ETT--TEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CceEEEEecC---CccceEEEc------cCc--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4688999884 689999977 222 56999999999999999999999999999999999999999999965
Q ss_pred ---CCeEEEEEeecC
Q psy8107 435 ---ELSLCMMMRSSR 446 (1613)
Q Consensus 435 ---~~~l~L~vr~~~ 446 (1613)
+..++|+|.|.+
T Consensus 70 ~~~g~~v~L~V~r~g 84 (468)
T 3shw_A 70 LPKGEEVTILAQKKK 84 (468)
T ss_dssp SCTTSEEEEEEEECH
T ss_pred cCCCCEEEEEEEECC
Confidence 378999998864
No 243
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.68 E-value=7e-08 Score=102.85 Aligned_cols=80 Identities=24% Similarity=0.274 Sum_probs=68.3
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE 434 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~ 434 (1613)
..+.|++.|.. .+++||.+.. .. .+++|++|.|||+|+++||++||+|+.|||++|.+++++....+++.
T Consensus 4 ~~r~v~l~k~~-~~~lG~~~~~--~~-------~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~ 73 (166)
T 1w9e_A 4 DPREVILCKDQ-DGKIGLRLKS--ID-------NGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQ 73 (166)
T ss_dssp CCEEEEEECCT-TSCCSEEEEE--ET-------TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CCEEEEEEeCC-CCcEeEEEEe--CC-------CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 46889999966 3899999987 22 35899999999999999999999999999999999999888888853
Q ss_pred --CCeEEEEEee
Q psy8107 435 --ELSLCMMMRS 444 (1613)
Q Consensus 435 --~~~l~L~vr~ 444 (1613)
+.++.|+||+
T Consensus 74 ~~~~~v~l~vr~ 85 (166)
T 1w9e_A 74 AFGEKITMTIRD 85 (166)
T ss_dssp CCSSEEEEEEEC
T ss_pred CCCCEEEEEEEc
Confidence 3689999954
No 244
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=98.67 E-value=4.8e-08 Score=117.91 Aligned_cols=95 Identities=12% Similarity=0.301 Sum_probs=73.7
Q ss_pred ccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEE-----eeCCCCC---CCCce
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIM-----QPIPEHP---KRDYI 75 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~-----~~a~dy~---KK~nV 75 (1613)
.+|||.+++++ .+++||+.|+||++..|++||++.. ..|.+.|.|.++.. +..++.. +++|.
T Consensus 271 k~G~L~K~g~~----~~k~WKkRwFVL~~~~L~YYk~~~d------~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~ 340 (386)
T 3lju_X 271 KEGYMEKTGPK----QTEGFRKRWFTMDDRRLMYFKDPLD------AFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHG 340 (386)
T ss_dssp EEEEEEECCTT----SCSCCEEEEEEEETTEEEEESSTTC------SBCSEEEECCCGGGTCEEEESCCTTCCSCCSCEE
T ss_pred eeeeEEEECCC----CCCCCcccEEEEECCEEEEEecCCC------cccceEEEeecceeeeeecccCCccccccCCCcE
Confidence 47888876554 2368999999999999999999743 35678888865432 2233332 23799
Q ss_pred EEEEcCCCCeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 76 FCLSTAFGDAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 76 F~L~t~dg~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
|.+.|++ +.|+|+|++++||+.||++|+.+++.
T Consensus 341 F~I~t~~-rty~l~A~s~~e~~~Wi~aL~~~i~~ 373 (386)
T 3lju_X 341 ITIVTPD-RKFLFACETESDQREWVAAFQKAVDR 373 (386)
T ss_dssp EEEECSS-CEEEEEESSHHHHHHHHHHHHHHHHS
T ss_pred EEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 9999986 89999999999999999999998763
No 245
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.65 E-value=7.7e-08 Score=105.69 Aligned_cols=80 Identities=16% Similarity=0.306 Sum_probs=66.3
Q ss_pred EEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhcC
Q psy8107 357 YQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQEE 435 (1613)
Q Consensus 357 ~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~~ 435 (1613)
.++.+.+... .++||.+.. +. .+++|.+|.|||+|+++| |++||.|++|||++|.++++.++.++++..
T Consensus 115 ~~v~l~~~~~-~~lG~~~~~------~~---~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 184 (206)
T 3r0h_A 115 FNVDLMKKAG-KELGLSLSP------NE---IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGA 184 (206)
T ss_dssp EEEEEECCTT-CCCCEEEEE------CS---SCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred EEEEEecCCC-CccCeEEEc------CC---ceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4455555443 689999875 11 358999999999999999 999999999999999999999999999654
Q ss_pred -CeEEEEEeecC
Q psy8107 436 -LSLCMMMRSSR 446 (1613)
Q Consensus 436 -~~l~L~vr~~~ 446 (1613)
..+.|+|.|..
T Consensus 185 ~~~v~L~V~R~~ 196 (206)
T 3r0h_A 185 NGKVSMEVTRPK 196 (206)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCeEEEEEEeCC
Confidence 78999998743
No 246
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.63 E-value=7.5e-08 Score=116.38 Aligned_cols=82 Identities=16% Similarity=0.254 Sum_probs=70.6
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
..++.|++.|.+ ++||++.+ +.. .+++|++|.|||+|+++||++||+|++|||.+|.+++++++..+++
T Consensus 8 ~~~~~v~~~k~~---~lG~~i~g------g~~--~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~ 76 (391)
T 3tsz_A 8 PSMKLVKFRKGD---SVGLRLAG------GND--VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLL 76 (391)
T ss_dssp -CEEEEEEECCS---SCCEEEEE------ETT--TEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCcEEEEeecCC---ceeEEEEe------cCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 456788888864 59999987 222 5699999999999999999999999999999999999999999997
Q ss_pred c---CCeEEEEEeecC
Q psy8107 434 E---ELSLCMMMRSSR 446 (1613)
Q Consensus 434 ~---~~~l~L~vr~~~ 446 (1613)
. +..++|+|.|.+
T Consensus 77 ~~~~g~~v~l~v~r~~ 92 (391)
T 3tsz_A 77 DLPKGEEVTILAQKKK 92 (391)
T ss_dssp HSCTTSEEEEEEEECH
T ss_pred hhcCCCeEEEEEeeCC
Confidence 3 378999998865
No 247
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.59 E-value=1.7e-07 Score=102.62 Aligned_cols=87 Identities=15% Similarity=0.283 Sum_probs=69.0
Q ss_pred EEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhcC
Q psy8107 357 YQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQEE 435 (1613)
Q Consensus 357 ~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~~ 435 (1613)
..|++.+.. ..+||.+..-... ......+++|++|.++|+|+++| |++||+|++|||++|.+++++++.++++..
T Consensus 108 ~~v~l~~~~--~~lG~~l~~g~~~--~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 183 (200)
T 2qt5_A 108 VEVTLHKEG--NTFGFVIRGGAHD--DRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC 183 (200)
T ss_dssp EEEEEECBT--TBCSEEEEEECCS--STTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred EEEEEecCC--CCeEEEEECCCCC--CccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 445555533 7899999872111 11113579999999999999999 999999999999999999999999999654
Q ss_pred -CeEEEEEeecCC
Q psy8107 436 -LSLCMMMRSSRT 447 (1613)
Q Consensus 436 -~~l~L~vr~~~~ 447 (1613)
..+.|+|+|.+.
T Consensus 184 ~~~v~l~v~R~~~ 196 (200)
T 2qt5_A 184 GQEATLLIEYDVS 196 (200)
T ss_dssp CSEEEEEEEEEEE
T ss_pred CCeEEEEEEECCc
Confidence 789999988643
No 248
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=98.57 E-value=5.1e-08 Score=117.74 Aligned_cols=94 Identities=11% Similarity=0.167 Sum_probs=76.1
Q ss_pred ccceEEecccccccccCCCceEEEEEE--eCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEE--
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCL--KGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLS-- 79 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vL--kG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~-- 79 (1613)
..|||++|++. .++||+.|+|| ++..|++|+++. ...|.+.|.|.++.+...++...++|.|.+.
T Consensus 148 keG~L~KrG~~-----~k~WkrRwFVL~~~~~~L~Yy~~~~------~~~p~g~I~L~~~~~~~~~~~~~~~~~f~I~~~ 216 (386)
T 3lju_X 148 REGFLWKRGRD-----NGQFLSRKFVLTEREGALKYFNRND------AKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYL 216 (386)
T ss_dssp EEEEEEEECSS-----SCCEEEEEEEEETTTTEEEEEC-----------CCSEEEEGGGEEEEECHHHHTSTTCEEEEEE
T ss_pred cccceeeeccc-----cCCceEEEEEEEcCCCEEEEECCCC------ccCcccEEEeeccEEEEcccccCCCceEEEEEe
Confidence 46899988765 35799999999 899999999873 3578899999998777766555799999997
Q ss_pred -cCCCCeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 80 -TAFGDAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 80 -t~dg~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
+...+.|.|+|+|.+||+.||++|+.|..
T Consensus 217 ~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~~ 246 (386)
T 3lju_X 217 KDNSTRNIFIYHEDGKEIVDWFNALRAARF 246 (386)
T ss_dssp ETTEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEEEcCCHHHHHHHHHhhhhccc
Confidence 45568999999999999999999987743
No 249
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.56 E-value=1.2e-07 Score=123.28 Aligned_cols=91 Identities=16% Similarity=0.258 Sum_probs=74.1
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHh
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQ 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~ 433 (1613)
..++|+|.|.. ++|||++.+..+.. ......++||++|.|||+|+++| |++||+|+.|||++|.++++.++..+++
T Consensus 59 ~~~~v~l~k~~--~glGf~i~gg~~~~-~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 135 (721)
T 2xkx_A 59 EYEEITLERGN--SGLGFSIAGGTDNP-HIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALK 135 (721)
T ss_pred eEEEEEEEeCC--CCCCEEEeCCcCCc-ccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhh
Confidence 34789999977 69999999821110 01123679999999999999999 9999999999999999999999999996
Q ss_pred cC-CeEEEEEeecCCC
Q psy8107 434 EE-LSLCMMMRSSRTE 448 (1613)
Q Consensus 434 ~~-~~l~L~vr~~~~~ 448 (1613)
.. ..+.|+|+|.+..
T Consensus 136 ~~g~~v~l~v~R~~~~ 151 (721)
T 2xkx_A 136 EAGSIVRLYVMRRKPP 151 (721)
T ss_pred ccccccceEEEecccc
Confidence 43 7899999887643
No 250
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.48 E-value=8e-08 Score=116.15 Aligned_cols=89 Identities=17% Similarity=0.208 Sum_probs=73.6
Q ss_pred ccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHH
Q psy8107 353 AKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESV 431 (1613)
Q Consensus 353 ~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~l 431 (1613)
++..+.|++.|.+. +++||.+.+ .. .+...++++|.+|.|||+|+++| |++||+|+.|||++|.+++++++.++
T Consensus 202 ~~~~~~V~i~k~~g-e~lG~~i~~--~~--~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~ 276 (388)
T 3suz_A 202 SENCKELQLEKHKG-EILGVVVVE--SG--WGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGI 276 (388)
T ss_dssp SSCCEEEEECCCSS-CCCCCCCBC--C-----CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHH
T ss_pred cccceEEEEECCCC-CceeEEEEe--cC--CCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHH
Confidence 45678999999764 789999877 22 22334678999999999999999 99999999999999999999999999
Q ss_pred HhcC---CeEEEEEeecC
Q psy8107 432 LQEE---LSLCMMMRSSR 446 (1613)
Q Consensus 432 l~~~---~~l~L~vr~~~ 446 (1613)
++.. ..+.|+|+|.+
T Consensus 277 l~~~~~~~~v~l~v~r~~ 294 (388)
T 3suz_A 277 IKGLKNQTQVKLNIVSCP 294 (388)
T ss_dssp TTTCTTCSCEEEEEEECC
T ss_pred HHhccCCCcccccccccc
Confidence 9643 55999998753
No 251
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.42 E-value=1e-06 Score=88.38 Aligned_cols=95 Identities=22% Similarity=0.354 Sum_probs=71.3
Q ss_pred cceEEecccccccccCCCceEEEEEEeC------CeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCC----CCCCCc
Q psy8107 5 KKWLLRKKHQIELARKRGWKGYWVCLKG------TTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPE----HPKRDY 74 (1613)
Q Consensus 5 Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG------~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~d----y~KK~n 74 (1613)
+|+|..-...+ +++ +||++|+||.. ..|-+|..+.++. +...++..|.|.+|+.....+ .+|..+
T Consensus 15 ~G~L~~q~q~~--fgk-KWrk~w~vLy~~S~~GvaRLE~yd~~ek~~--r~~~~rrVIrLsdCisV~~~~~e~~~pk~~~ 89 (127)
T 2d9w_A 15 QGFLYLQQQQT--FGK-KWRRFGASLYGGSDCALARLELQEGPEKPR--RCEAARKVIRLSDCLRVAEAGGEASSPRDTS 89 (127)
T ss_dssp EEEEEECBCSS--SSC-BCCEEEEEEECCSSSSCCEEEEECCCSCSS--SCSCCEEEECGGGEEEEEECCSCSSSCSSCE
T ss_pred ceEEEecccch--hhh-hhheeEEEEecCCCCCceeeeeeeccCccc--cCCCCceEEEhhhCCeEecccCccCCCCcce
Confidence 45555443312 455 49999999996 3678898876542 335678999999996655533 358999
Q ss_pred eEEEEcCCCCeEEeecCCHHHHHHHHHHHHHH
Q psy8107 75 IFCLSTAFGDAYLFQAPCQVELENWVNSIHSA 106 (1613)
Q Consensus 75 VF~L~t~dg~~yLFQA~~~~em~~Wi~~I~~a 106 (1613)
+|+|-|++ +.|+|.|++ .|+++||.+|-..
T Consensus 90 aF~l~T~e-r~~~laAe~-~E~~~Wi~~ic~~ 119 (127)
T 2d9w_A 90 AFFLETKE-RLYLLAAPA-AERGDWVQAICLL 119 (127)
T ss_dssp EEEEEESS-CEEEEEECH-HHHHHHHHHHHHH
T ss_pred EEEEEeCC-cEEEEEeCc-HHHHHHHHHHHHH
Confidence 99999999 789999996 5999999999765
No 252
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.39 E-value=7.6e-07 Score=97.33 Aligned_cols=85 Identities=21% Similarity=0.325 Sum_probs=67.7
Q ss_pred EEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHHHHhc-
Q psy8107 357 YQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLESVLQE- 434 (1613)
Q Consensus 357 ~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ll~~- 434 (1613)
.++++.+.. ...+||.+.. ... .....+++|.+|.|+|+|+++| |++||.|++|||++|.+++++++.++++.
T Consensus 109 ~~v~l~~~~-~~~lG~~~~~--~~~--~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 183 (196)
T 1p1d_A 109 FHVKLPKKH-SVELGITISS--PSS--RKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC 183 (196)
T ss_dssp EEEEECCCS-SCCCCCEEEC--SCS--SSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC
T ss_pred EEEEecCCC-CCCcCEEEEC--CCC--CCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 445555433 3679999976 211 1112568999999999999999 99999999999999999999999999965
Q ss_pred CCeEEEEEeecC
Q psy8107 435 ELSLCMMMRSSR 446 (1613)
Q Consensus 435 ~~~l~L~vr~~~ 446 (1613)
+..+.|+|.|.+
T Consensus 184 ~~~v~l~v~R~~ 195 (196)
T 1p1d_A 184 EDLVKLKIRKDE 195 (196)
T ss_dssp TTCEEEEEECCC
T ss_pred CCEEEEEEEeCC
Confidence 588999998753
No 253
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.36 E-value=8.1e-07 Score=115.55 Aligned_cols=86 Identities=17% Similarity=0.256 Sum_probs=72.6
Q ss_pred cccceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcC-CCCCCEEEEEcCeecCCCCHHHHHH
Q psy8107 352 CAKILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNG-LIKGDEIMVINGAIVSDLDMMYLES 430 (1613)
Q Consensus 352 ~~~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~G-L~~GDeIl~vNg~~v~~l~~~~~~~ 430 (1613)
++...+.|+|.|.. +++||++.+ .++ ..+++|++|.+||+|+++| |++||+|++|||++|.+++++++.+
T Consensus 304 ~~~~~~~v~l~~~~--~~lG~~i~~--~~~-----~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~ 374 (721)
T 2xkx_A 304 IPREPRRIVIHRGS--TGLGFNIVG--GED-----GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAI 374 (721)
T ss_pred cccceEEEEEEECC--CCccEEEec--cCC-----CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHH
Confidence 34567889999865 689999976 221 2569999999999999999 9999999999999999999999999
Q ss_pred HHhcC-CeEEEEEeecC
Q psy8107 431 VLQEE-LSLCMMMRSSR 446 (1613)
Q Consensus 431 ll~~~-~~l~L~vr~~~ 446 (1613)
+++.. ..++|+|.|..
T Consensus 375 ~l~~~~~~v~L~v~r~~ 391 (721)
T 2xkx_A 375 ALKNAGQTVTIIAQYKP 391 (721)
T ss_pred HHHhcCCeEEEEEEeCc
Confidence 99654 78899987654
No 254
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.26 E-value=1.6e-06 Score=86.32 Aligned_cols=57 Identities=23% Similarity=0.287 Sum_probs=51.8
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcCCeEEEEEeecC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEELSLCMMMRSSR 446 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~~~l~L~vr~~~ 446 (1613)
.+++|.+|.++|+|+++||++||.|+.|||+++. +.+++.++++.+..+.|+|+|.+
T Consensus 35 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~~v~l~v~R~g 91 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQ--NAEDVYEAVRTQSQLAVQIRRGR 91 (113)
T ss_dssp SCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECC--SHHHHHHHHHHCSSEEEEEEETT
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECC--CHHHHHHHHhCCCeEEEEEEECC
Confidence 5689999999999999999999999999999997 57889999976789999998864
No 255
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=98.23 E-value=2.5e-06 Score=89.10 Aligned_cols=87 Identities=16% Similarity=0.340 Sum_probs=73.5
Q ss_pred ccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcC---CCCeEEeecCCHH
Q psy8107 18 ARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTA---FGDAYLFQAPCQV 94 (1613)
Q Consensus 18 ~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~---dg~~yLFQA~~~~ 94 (1613)
...++||+||+|+|++.|++||.+.... ..|...|+|.||.+.+...-...|+.++|--+ .-++|.+.+++++
T Consensus 61 ~tLKgyKryWFv~kd~~LsyYKskEe~~----geP~~~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~gm~e~~Lrcd~E~ 136 (173)
T 4f7h_A 61 LTLKGYKQYWCTFKDTSISCYKSKEESS----GTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEK 136 (173)
T ss_dssp TBCCCCEEEEEEEETTEEEEESCGGGCS----SCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHH
T ss_pred cccccceeEEEEEeCCEEEEEcCHhHhc----CCCceEEecCceEEeccccccccceeEEEeccCCCCcceeeeecCCHH
Confidence 4568999999999999999999875432 45778999999999987666677777887665 4678999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy8107 95 ELENWVNSIHSACA 108 (1613)
Q Consensus 95 em~~Wi~~I~~aaa 108 (1613)
++..|+.+...|++
T Consensus 137 qya~WMAAcrLAsk 150 (173)
T 4f7h_A 137 QYAHWMAACRLASK 150 (173)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhhcc
Confidence 99999999999876
No 256
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=98.16 E-value=3.5e-06 Score=95.76 Aligned_cols=95 Identities=21% Similarity=0.353 Sum_probs=71.3
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCce---eEeCceEEeeCCCCCC-----CCc
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHL---IIVDGAIMQPIPEHPK-----RDY 74 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~---I~l~~~~~~~a~dy~K-----K~n 74 (1613)
++.|||..|... +++||+.|++|+++.||+++.... ..+++. +.+.+..+-...+..| +++
T Consensus 133 ~~~G~L~~ke~~-----~K~WkkRyfvLr~sgLy~~~k~~s------k~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~ 201 (256)
T 3hk0_A 133 EIQGFLHVKELG-----KKSWKKLYVCLRRSGLYCSTKGTS------AAPRHLQLLADLEDSNIFSLIAGRKQYNAPTDH 201 (256)
T ss_dssp EEEEEEEEECTT-----SSCEEEEEEEEETTEEEEESSTTC------CCGGGEEEEECCTTEEEEEESSTHHHHCCSSSE
T ss_pred cceeEEEEecCC-----CCcceEEEEEEeCCEEEEEecCCC------CccccceEEEEcCCCEEEEecccccccCCCCCC
Confidence 456888877543 367999999999999999996632 112333 5788777766666543 279
Q ss_pred eEEEEcCCC-----CeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 75 IFCLSTAFG-----DAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 75 VF~L~t~dg-----~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
.|.|+...- ..|+|-|+|++++..|+++|..|-.
T Consensus 202 ~F~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~ 240 (256)
T 3hk0_A 202 GLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKY 240 (256)
T ss_dssp EEEEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EEEEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 999996543 3699999999999999999998833
No 257
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=98.13 E-value=4.7e-06 Score=86.22 Aligned_cols=87 Identities=15% Similarity=0.260 Sum_probs=70.2
Q ss_pred ccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcC--C-CCeEEeecCCHH
Q psy8107 18 ARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTA--F-GDAYLFQAPCQV 94 (1613)
Q Consensus 18 ~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~--d-g~~yLFQA~~~~ 94 (1613)
..-++||+||||++++.|++||++.... ..|...|+|.||.+.+...-...|+.|+|..+ + .+++.+-+++++
T Consensus 40 ltLKgfKryWfv~kDt~LsyYKSkEe~~----geP~~~inLrGCEVtPDVnva~~Kf~ikL~ip~~~gm~e~~LrcdsE~ 115 (165)
T 4bbk_A 40 LMLKACKQYWFVFKDTSIAYFKNKELEQ----GEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVADGMNEVYLRCDHED 115 (165)
T ss_dssp ----CCEEEEEEEETTEEEEESSGGGTT----SCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHH
T ss_pred cccccceeEEEEEeCCEEEEEcCHHHhc----CCCceEEecCccEEecccccccceeeEEEecCCCCcceeeeeecCCHH
Confidence 4568899999999999999999885532 46778999999988876666677888888444 4 459999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy8107 95 ELENWVNSIHSACA 108 (1613)
Q Consensus 95 em~~Wi~~I~~aaa 108 (1613)
+...|+.+...|++
T Consensus 116 QYa~WMAAcrLAsk 129 (165)
T 4bbk_A 116 QYARWMAACILASK 129 (165)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhccc
Confidence 99999999999976
No 258
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.12 E-value=4.6e-06 Score=82.97 Aligned_cols=57 Identities=26% Similarity=0.355 Sum_probs=50.7
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcCCeEEEEEeecC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEELSLCMMMRSSR 446 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~~~l~L~vr~~~ 446 (1613)
.+++|++|.++|+|+++||++||.|+.|||+++. +..++.+.++.+..+.|+|+|.+
T Consensus 35 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~g~~v~l~v~R~g 91 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLV--DSSELQEAVLTESPLLLEVRRGN 91 (112)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEEEEETTEECC--SHHHHHHHHHHCSSEEEEEEETT
T ss_pred CCeEEEEECCCChHHHCCCCCCCEEEEECCEECC--CHHHHHHHHhCCCeEEEEEEECC
Confidence 5699999999999999999999999999999997 46788888866788999998765
No 259
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.12 E-value=3.2e-06 Score=80.39 Aligned_cols=57 Identities=23% Similarity=0.285 Sum_probs=47.5
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHh---cCCeEEEEEeecC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQ---EELSLCMMMRSSR 446 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~---~~~~l~L~vr~~~ 446 (1613)
.++.|..+.|+|+|+++||++||.|+.|||++|.+ ..++.++++ .+..+.|+|.|.+
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~--~~d~~~~~~~~~~g~~v~l~v~R~g 78 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTD--PNVMNTLFQSMNEMTEMSLTVERDG 78 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTC--HHHHHHHHHTGGGCSEEEEEEEETT
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEEEECC
Confidence 46789999999999999999999999999999985 456666653 3478999998865
No 260
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.08 E-value=3.9e-06 Score=80.13 Aligned_cols=55 Identities=20% Similarity=0.353 Sum_probs=47.8
Q ss_pred eEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc--CCeEEEEEeecC
Q psy8107 390 CYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE--ELSLCMMMRSSR 446 (1613)
Q Consensus 390 ~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~--~~~l~L~vr~~~ 446 (1613)
+.|.+|.++|+|+++||++||.|+.|||+++.+ .+++.+++.. +..+.|+|+|.+
T Consensus 6 ~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~g 62 (91)
T 2zpm_A 6 PVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQ--WVTFVMLVRDNPGXSLALEIERQG 62 (91)
T ss_dssp CBCSEECTTSHHHHTTCCTTCEEEEETTEECCC--HHHHHHHHHHCTTCCEEEEEEETT
T ss_pred eEEEEECCCChHHhcCCCCCCEEEEECCeEcCC--HHHHHHHHhcCCCCeEEEEEEECC
Confidence 578999999999999999999999999999984 6788888854 368999998765
No 261
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.03 E-value=2.4e-06 Score=82.30 Aligned_cols=56 Identities=16% Similarity=0.171 Sum_probs=48.2
Q ss_pred eeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc---CCeEEEEEeecCC
Q psy8107 389 CCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE---ELSLCMMMRSSRT 447 (1613)
Q Consensus 389 ~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~---~~~l~L~vr~~~~ 447 (1613)
+++|.+|.|+|||++ ||++||.|+.|||++|.+ ..++.++++. +.++.|+|+|.+.
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~ 60 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQS--AEKLIDYISSKKAGDKVTLKIEREEK 60 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSS--HHHHHHHHSSCCSSCEECEEEESSSC
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCC--HHHHHHHHHcCCCCCEEEEEEEECCE
Confidence 478999999999999 999999999999999975 5788888853 3689999988654
No 262
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.02 E-value=8.1e-06 Score=79.08 Aligned_cols=56 Identities=16% Similarity=0.202 Sum_probs=47.5
Q ss_pred eEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC---CeEEEEEeecCC
Q psy8107 390 CYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE---LSLCMMMRSSRT 447 (1613)
Q Consensus 390 ~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~---~~l~L~vr~~~~ 447 (1613)
..|.+|.++|+|+++||++||+|+.|||++|.+ .+++...+... ..+.|+|+|.+.
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPD--WDAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSS--HHHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCC--HHHHHHHHHHhcCCCcEEEEEEECCC
Confidence 478999999999999999999999999999985 56787777432 579999988653
No 263
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.00 E-value=1.4e-05 Score=78.08 Aligned_cols=57 Identities=19% Similarity=0.175 Sum_probs=48.0
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc---CCeEEEEEeecCC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE---ELSLCMMMRSSRT 447 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~---~~~l~L~vr~~~~ 447 (1613)
.+++|.+|.|+|+|++ ||++||.|+.|||++|.+ .+++.++++. +..+.|+|+|.+.
T Consensus 7 ~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~R~g~ 66 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKS--SQEFIDYIHSKKVGDTVKINYKHGDK 66 (100)
T ss_dssp CCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSS--HHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred CCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 5689999999999995 999999999999999875 5677777753 3789999987543
No 264
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=97.99 E-value=6.9e-06 Score=94.44 Aligned_cols=96 Identities=19% Similarity=0.273 Sum_probs=66.7
Q ss_pred cccceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCC-----CCceEE
Q psy8107 3 SVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPK-----RDYIFC 77 (1613)
Q Consensus 3 ~~Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~K-----K~nVF~ 77 (1613)
++.|||..|... +++|++.|++|+++.||+++.... + ...+....+.++++.+-...++.| +++.|.
T Consensus 159 e~~G~L~~k~~~-----~k~WkkRyfvLr~sgLyy~~K~~s--k-~~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ 230 (281)
T 4gmv_A 159 EIEGVLWLKDDG-----KKSWKKRYFLLRASGIYYVPKGKA--K-VSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLV 230 (281)
T ss_dssp CCEEEEEEECTT-----SSCEEEEEEEECSSCEEEC------------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEE
T ss_pred ccEEEEEEECCC-----CCCCeEEEEEEeCCEEEEEeCCCC--C-ccccceEEEEcCCcEEEEecccccccCCCCCcEEE
Confidence 357888777542 257999999999999999886532 1 111223345777766655544432 489999
Q ss_pred EEcCC-----CCeEEeecCCHHHHHHHHHHHHHH
Q psy8107 78 LSTAF-----GDAYLFQAPCQVELENWVNSIHSA 106 (1613)
Q Consensus 78 L~t~d-----g~~yLFQA~~~~em~~Wi~~I~~a 106 (1613)
|+.+. ...|+|-|+|++++..|+++|..|
T Consensus 231 ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~a 264 (281)
T 4gmv_A 231 LKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIA 264 (281)
T ss_dssp EECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHH
T ss_pred EecCccCCCCCceEEEEeCCHHHHHHHHHHHHHH
Confidence 99753 357999999999999999999987
No 265
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=97.99 E-value=5e-06 Score=101.79 Aligned_cols=97 Identities=19% Similarity=0.313 Sum_probs=69.4
Q ss_pred ccceEEecccccccccCCCceEEEEEEe-CCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC
Q psy8107 4 VKKWLLRKKHQIELARKRGWKGYWVCLK-GTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF 82 (1613)
Q Consensus 4 ~Kg~L~~K~~k~~~~~~R~Wk~~~~vLk-G~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d 82 (1613)
..|||.+++++. +.||+.|+||+ ++.|++||++..... ....+-..+.+.+|..... ..+|+|.|.+++.+
T Consensus 8 keG~L~K~g~~~-----k~Wk~r~fvL~~~~~l~yyk~~~~~~~-~~~i~l~~~~~~~~~~~~~--~~~~~~~f~I~~~~ 79 (446)
T 4ejn_A 8 KEGWLHKRGEYI-----KTWRPRYFLLKNDGTFIGYKERPQDVD-QREAPLNNFSVAQCQLMKT--ERPRPNTFIIRCLQ 79 (446)
T ss_dssp EEEEEEEEETTT-----TEEEEEEEEEETTSBEEEESSCC--------CCCGGGBCTTCEEEEE--CSSSTTEEEEEEEE
T ss_pred EEeeEEeecccc-----ccccceEEEEeeCCEEEEEecCCCCCc-cCcccccCccccceeecCC--CCCCCceeEEEcCC
Confidence 469999887653 46999999998 899999998854322 1112223333344443332 25679999999999
Q ss_pred CCeE---EeecCCHHHHHHHHHHHHHHHH
Q psy8107 83 GDAY---LFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 83 g~~y---LFQA~~~~em~~Wi~~I~~aaa 108 (1613)
+..+ .|++++.+|++.|+++|+.++.
T Consensus 80 ~~~~~~r~~~~~~~ee~e~W~~ai~~~i~ 108 (446)
T 4ejn_A 80 WTTVIERTFHVETPEEREEWTTAIQTVAD 108 (446)
T ss_dssp TTEEEEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred CceeeeeEEecCCHHHHHHHHHHHHhhhh
Confidence 8877 7999999999999999998854
No 266
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=97.99 E-value=7e-06 Score=79.33 Aligned_cols=57 Identities=23% Similarity=0.212 Sum_probs=49.0
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc---CCeEEEEEeecCC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE---ELSLCMMMRSSRT 447 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~---~~~l~L~vr~~~~ 447 (1613)
.+++|++|.++|+|++ ||++||.|+.|||+++.+ ..++.++++. +..+.|+|.|.+.
T Consensus 5 ~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~ 64 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINT--SEQIVSYVREKQAGDRVRVTFIRDRK 64 (94)
T ss_dssp CCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCC--HHHHHHHHHHSCTTCCEEEEEEETTE
T ss_pred CcEEEEEECCCChHHh-CCCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 4589999999999999 999999999999999975 5788888853 4789999988653
No 267
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.96 E-value=1.4e-05 Score=78.70 Aligned_cols=58 Identities=22% Similarity=0.239 Sum_probs=46.4
Q ss_pred eeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCC-HHHHHHHHhcCCeEEEEEeecC
Q psy8107 389 CCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLD-MMYLESVLQEELSLCMMMRSSR 446 (1613)
Q Consensus 389 ~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~-~~~~~~ll~~~~~l~L~vr~~~ 446 (1613)
++.|..+.|+|+|+++||++||.|+.|||++|.+.+ +.++.+.+..+..+.|+|.|.+
T Consensus 38 G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g 96 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDG 96 (105)
T ss_dssp EEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEETT
T ss_pred EEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEECC
Confidence 467889999999999999999999999999999875 3333333344578999998865
No 268
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.92 E-value=2.3e-05 Score=94.74 Aligned_cols=74 Identities=16% Similarity=0.193 Sum_probs=61.4
Q ss_pred CCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC--CeEEEEEee
Q psy8107 367 DHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE--LSLCMMMRS 444 (1613)
Q Consensus 367 ~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~--~~l~L~vr~ 444 (1613)
-.++|+.+.. .. .+..+++|.+|.|||+|+++||++||+|+.|||++|.+++.+++.++++.. .++.|+|+|
T Consensus 84 ~~giG~~~~~--~~----~~~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r 157 (388)
T 1fc6_A 84 VTGVGLEITY--DG----GSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHA 157 (388)
T ss_dssp CBBCSEEEEE--CT----TCSSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEE
T ss_pred eEEEEEEEEE--ee----cCCCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEe
Confidence 3578888876 20 111358999999999999999999999999999999999999999999643 789999987
Q ss_pred cC
Q psy8107 445 SR 446 (1613)
Q Consensus 445 ~~ 446 (1613)
.+
T Consensus 158 ~g 159 (388)
T 1fc6_A 158 PG 159 (388)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 269
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=97.90 E-value=1.6e-05 Score=81.83 Aligned_cols=57 Identities=18% Similarity=0.092 Sum_probs=48.6
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc---CCeEEEEEeecCC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE---ELSLCMMMRSSRT 447 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~---~~~l~L~vr~~~~ 447 (1613)
.+++|.+|.++|+|+ +||++||.|+.|||++|.+ ..++.+++.. +..+.|+|.|.+.
T Consensus 57 ~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~ 116 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIAS--STDLQSALYNHSIGDTIKITYYRNGK 116 (134)
T ss_dssp SCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCC--HHHHHHHHHHSSTTCEEEEEEEETTE
T ss_pred CCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCC--HHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 568999999999999 9999999999999999976 4677777743 3789999988653
No 270
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.90 E-value=1.5e-06 Score=105.04 Aligned_cols=65 Identities=22% Similarity=0.255 Sum_probs=0.0
Q ss_pred CCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC-CeEEEEEee
Q psy8107 367 DHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE-LSLCMMMRS 444 (1613)
Q Consensus 367 ~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~-~~l~L~vr~ 444 (1613)
.+++||.+.. .+|.+|.|||+|+++||++||+|++|||++|.+.+++++.++++.. ..++|+|.+
T Consensus 307 ~~~lG~~i~~-------------g~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~p 372 (388)
T 3suz_A 307 KYQLGFSVQN-------------GIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMP 372 (388)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CCccceEEec-------------CEEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEe
Confidence 3678998765 2899999999999999999999999999999999999999999654 677887753
No 271
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.86 E-value=5.6e-05 Score=80.35 Aligned_cols=75 Identities=19% Similarity=0.282 Sum_probs=60.9
Q ss_pred ceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHH-h
Q psy8107 355 ILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVL-Q 433 (1613)
Q Consensus 355 ~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll-~ 433 (1613)
..+++++.+.. ...+||.+.. + +|++|.++|+|+++||++||.|++|||+++.+++..++.-.+ +
T Consensus 88 ~~~~v~l~~~~-~~~lG~~~~~------------g-~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~~~~v~~~v~r 153 (166)
T 1w9e_A 88 FERTITMHKDS-TGHVGFIFKN------------G-KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILST 153 (166)
T ss_dssp TCEEEEEECCT-TSCCSEEEET------------T-EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CcEEEEEecCC-CCcEeEEEeC------------C-EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCChHHHHHHHhh
Confidence 45667776543 3678998752 1 799999999999999999999999999999999999987776 5
Q ss_pred cCCeEEEEEe
Q psy8107 434 EELSLCMMMR 443 (1613)
Q Consensus 434 ~~~~l~L~vr 443 (1613)
.+..+.+.|.
T Consensus 154 ~g~~~~l~v~ 163 (166)
T 1w9e_A 154 SGTVVTITIM 163 (166)
T ss_dssp SCSEEEEEEE
T ss_pred CCCEEEEEEE
Confidence 4577777765
No 272
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.84 E-value=4.5e-05 Score=76.89 Aligned_cols=82 Identities=21% Similarity=0.358 Sum_probs=61.1
Q ss_pred cCCCceEEEEEEeC------CeEEEecCCCcCCCCCCCCCCceeEeCce---EEeeCCCCCCCCceEEEEcCCCCeEEee
Q psy8107 19 RKRGWKGYWVCLKG------TTLLFYPCDSREGRSVDAAPKHLIIVDGA---IMQPIPEHPKRDYIFCLSTAFGDAYLFQ 89 (1613)
Q Consensus 19 ~~R~Wk~~~~vLkG------~~L~fyKd~~~~~~~~~~~p~~~I~l~~~---~~~~a~dy~KK~nVF~L~t~dg~~yLFQ 89 (1613)
+.-.|.++|.||+- -.|-||-.++. +.|+..|..... .-..+-+-+.+.|+|-|++.++.+|+|+
T Consensus 38 ~~~~W~k~RLvL~k~g~G~~y~LEfy~PPks------sKpK~~i~cs~I~EVR~tt~LEmPD~~nTFVlK~~n~~eyi~e 111 (136)
T 1v5m_A 38 GTAQWQKCRLLLRRAVAGERFRLEFFVPPKA------SRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILE 111 (136)
T ss_dssp CSCCCEEEEEEEEECSSSCCEEEEEESSTTS------SSCSSCEETTTCCBCCCCCCSSSCCCTTEECCBCTTSCBEEEE
T ss_pred cccchhheeeEEEEccCCCceEEEEecCCcc------cCCccccchhhhhhhhhccccccCCccceEEEEecCCcEEEEE
Confidence 44679999999982 46777855532 345555555422 2233346677899999999999999999
Q ss_pred cCCHHHHHHHHHHHHHH
Q psy8107 90 APCQVELENWVNSIHSA 106 (1613)
Q Consensus 90 A~~~~em~~Wi~~I~~a 106 (1613)
|.|..||++|+..|..-
T Consensus 112 a~d~~q~~sWla~Ir~C 128 (136)
T 1v5m_A 112 TIDSLQKHSWVADIQGC 128 (136)
T ss_dssp CSSHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhh
Confidence 99999999999999643
No 273
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.73 E-value=3.5e-05 Score=85.28 Aligned_cols=58 Identities=28% Similarity=0.256 Sum_probs=47.7
Q ss_pred ceeEEEEecCCChhhhcCCCCC-CEEEEEcCeecCCCCHHHHHHHH--hcCCeEEEEEeecC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKG-DEIMVINGAIVSDLDMMYLESVL--QEELSLCMMMRSSR 446 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~G-DeIl~vNg~~v~~l~~~~~~~ll--~~~~~l~L~vr~~~ 446 (1613)
.+++|.+|.|+|+|++|||++| |+|+.|||++|.+.+.... .++ ..+.++.|+|.|.+
T Consensus 16 ~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~-~~~~~~~g~~v~l~v~R~~ 76 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLK-DLLKANVEKPVKMLIYSSK 76 (209)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHH-HHHHHTTTSCEEEEEEETT
T ss_pred CEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHH-HHHhcCCCCEEEEEEEecC
Confidence 6799999999999999999999 9999999999998764332 333 22478999998754
No 274
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.69 E-value=5.1e-05 Score=89.52 Aligned_cols=58 Identities=22% Similarity=0.281 Sum_probs=52.4
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcCCeEEEEEeecCC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEELSLCMMMRSSRT 447 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~~~l~L~vr~~~~ 447 (1613)
.+++|.+|.|+|+|+++||++||.|+.|||++|. +.+++.++++.++++.|+|+|.+.
T Consensus 256 ~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~--~~~~l~~~l~~~~~v~l~v~R~g~ 313 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQ--NAEDVYEAVRTQSQLAVQIRRGRE 313 (325)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECC--SHHHHHHHHTTCSSEEEEEEETTE
T ss_pred CCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcC--CHHHHHHHHhCCCeEEEEEEECCE
Confidence 5799999999999999999999999999999997 468899999767899999998653
No 275
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.68 E-value=5.2e-05 Score=96.36 Aligned_cols=71 Identities=17% Similarity=0.145 Sum_probs=56.0
Q ss_pred CccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcCCeEEEEEeecCC
Q psy8107 368 HMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEELSLCMMMRSSRT 447 (1613)
Q Consensus 368 ~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~~~l~L~vr~~~~ 447 (1613)
...|+.+.. . . .++.|.+|.+||+|+++||++||+|+.|||++|+..++.++.+..+.+.++.|+|.|.+.
T Consensus 485 ~~lG~~~~~--~----~---~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v~~~~l~~~l~~~~~g~~v~l~v~R~g~ 555 (597)
T 4fgm_A 485 VNFGAKYKA--S----P---QGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQATEQSVKRILERYIPGDTVTIHAFRRDE 555 (597)
T ss_dssp CCCSEEEEE--E----T---TEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCTTTHHHHHTTCCTTCEEEEEEEETTE
T ss_pred cccceEEec--c----C---CeEEEEEeCCCChHHHCCCCCCCEEEEECCEECCHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 478887755 1 1 248999999999999999999999999999999655555555444445899999998654
No 276
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.65 E-value=4.8e-05 Score=92.18 Aligned_cols=56 Identities=25% Similarity=0.244 Sum_probs=47.7
Q ss_pred eeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc-CCeEEEEEeecCC
Q psy8107 389 CCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE-ELSLCMMMRSSRT 447 (1613)
Q Consensus 389 ~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~-~~~l~L~vr~~~~ 447 (1613)
.++|..|.|||||++|||++||.|+.|||++|.+.+ +.+++++ +.+++|+|.|.+.
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVV 147 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC
T ss_pred eEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCc
Confidence 478999999999999999999999999999999986 4455543 3789999987654
No 277
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.60 E-value=7.4e-05 Score=88.91 Aligned_cols=58 Identities=21% Similarity=0.221 Sum_probs=50.9
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc---CCeEEEEEeecCC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE---ELSLCMMMRSSRT 447 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~---~~~l~L~vr~~~~ 447 (1613)
.+++|.+|.|||+|+++||++||.|+.|||++|. +..++.+++.. +.++.|+|.|.+.
T Consensus 263 ~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 323 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNGK 323 (345)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEECEETTEECS--CHHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred ceEEEEEeccCChHHHcCCCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 4689999999999999999999999999999998 56788888743 3789999998764
No 278
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.53 E-value=0.00012 Score=86.20 Aligned_cols=58 Identities=12% Similarity=0.105 Sum_probs=50.5
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc---CCeEEEEEeecCC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE---ELSLCMMMRSSRT 447 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~---~~~l~L~vr~~~~ 447 (1613)
.+++|.+|.|+|+|+++||++||.|+.|||++|.+ ..++.++++. +.++.|+|+|.+.
T Consensus 244 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~ 304 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPVVVMRDDK 304 (318)
T ss_dssp CCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCC--HHHHHHHHHTSCTTCEEEEEEESSSC
T ss_pred CcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 46899999999999999999999999999999975 5788888854 3789999988654
No 279
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.52 E-value=0.00018 Score=88.67 Aligned_cols=58 Identities=22% Similarity=0.284 Sum_probs=51.1
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC-CeEEEEEeecCC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE-LSLCMMMRSSRT 447 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~-~~l~L~vr~~~~ 447 (1613)
.+++|.+|.|+|+|+++||++||.|++|||++|.+ .+++.++++.. +.+.|+|+|.+.
T Consensus 386 ~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~--~~~~~~~l~~~~~~v~l~v~R~g~ 444 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGIRPGDIIISANKKPVTD--VKSLQTIAQEKKKELLVQVLRGPG 444 (451)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCS--HHHHHHHTTSSCSCEEEEEEETTE
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCC--HHHHHHHHhcCCCeEEEEEEECCE
Confidence 46899999999999999999999999999999974 58999999654 789999988653
No 280
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.51 E-value=0.00016 Score=73.74 Aligned_cols=55 Identities=20% Similarity=0.122 Sum_probs=46.8
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc---CCeEEEEEeecC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE---ELSLCMMMRSSR 446 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~---~~~l~L~vr~~~ 446 (1613)
.++.|.+|.++|+|+++ |++||+|+.|||++|.+ ..++.+++.. +..+.|+| |.+
T Consensus 25 ~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~--~~dl~~~l~~~~~g~~v~l~V-R~g 82 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSN--LTTYSAALKTISVGEVINITT-DQG 82 (125)
T ss_dssp CCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSS--HHHHHHHHTTCCTTCEEEEEE-TTE
T ss_pred CceEEEEECCCChHHHh-cCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEE-ECC
Confidence 46899999999999999 99999999999999985 5678877753 37889998 654
No 281
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.50 E-value=0.00037 Score=77.03 Aligned_cols=74 Identities=20% Similarity=0.190 Sum_probs=54.8
Q ss_pred CCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCC-CCEEEEEcCeecCCCCHHHHHHHHhc--CCeEEEEEe
Q psy8107 367 DHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIK-GDEIMVINGAIVSDLDMMYLESVLQE--ELSLCMMMR 443 (1613)
Q Consensus 367 ~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~-GDeIl~vNg~~v~~l~~~~~~~ll~~--~~~l~L~vr 443 (1613)
...+|+.+.. +..+ ... ..+++|.+|.++|+|+++||++ ||.|+.|||+ |.+ .+++.++++. ++.+.|+|.
T Consensus 94 ~~~lGi~~~~-~~~~-~~~-~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~--~~~l~~~l~~~~g~~v~l~v~ 167 (209)
T 3rle_A 94 QGLLGVSIRF-CSFD-GAN-ENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNE--SEDLFSLIETHEAKPLKLYVY 167 (209)
T ss_dssp SSSSCEEEEE-EECT-TGG-GSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCS--SSCHHHHHHHTTTSCEEEEEE
T ss_pred cCccceEEee-cChh-Hcc-ccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCC--HHHHHHHHHhCCCCeEEEEEE
Confidence 3578998875 1111 111 1579999999999999999999 9999999998 543 4556666643 478999997
Q ss_pred ecC
Q psy8107 444 SSR 446 (1613)
Q Consensus 444 ~~~ 446 (1613)
|.+
T Consensus 168 r~~ 170 (209)
T 3rle_A 168 NTD 170 (209)
T ss_dssp ETT
T ss_pred ECC
Confidence 754
No 282
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.45 E-value=0.00015 Score=88.90 Aligned_cols=58 Identities=21% Similarity=0.234 Sum_probs=51.1
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC-CeEEEEEeecCC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE-LSLCMMMRSSRT 447 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~-~~l~L~vr~~~~ 447 (1613)
.+++|.+|.+||+|+++||++||.|++|||++|. +.+++.+++++. ..+.|+|+|.+.
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~--~~~~~~~~l~~~~~~v~l~v~R~g~ 421 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVN--SIAEMRKVLAAKPAIIALQIVRGNE 421 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECC--CHHHHHHHHHhCCCeEEEEEEECCE
Confidence 4689999999999999999999999999999997 568999999644 689999988654
No 283
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.38 E-value=0.00023 Score=83.87 Aligned_cols=70 Identities=16% Similarity=0.225 Sum_probs=54.7
Q ss_pred CccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc---CCeEEEEEee
Q psy8107 368 HMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE---ELSLCMMMRS 444 (1613)
Q Consensus 368 ~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~---~~~l~L~vr~ 444 (1613)
...|+.+.. .+ ...+++|.+|.|+|+|+++||++||.|+.|||++|.+ ..++..++.. +.++.|+|+|
T Consensus 229 ~~lGi~~~~--~~-----~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R 299 (324)
T 1y8t_A 229 ASLGVQVTN--DK-----DTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINS--ADALVAAVRSKAPGATVALTFQD 299 (324)
T ss_dssp EECCEEEES--CS-----SSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCS--HHHHHHHHHTSCTTCEEEEEEEC
T ss_pred cccceEeee--cc-----CCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEEEE
Confidence 456776643 11 1245899999999999999999999999999999985 4677777743 3789999987
Q ss_pred -cC
Q psy8107 445 -SR 446 (1613)
Q Consensus 445 -~~ 446 (1613)
.+
T Consensus 300 ~~g 302 (324)
T 1y8t_A 300 PSG 302 (324)
T ss_dssp SSC
T ss_pred CCC
Confidence 54
No 284
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.32 E-value=0.00031 Score=86.20 Aligned_cols=58 Identities=21% Similarity=0.223 Sum_probs=49.1
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc---CCeEEEEEeecCC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE---ELSLCMMMRSSRT 447 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~---~~~l~L~vr~~~~ 447 (1613)
.+++|.+|.|+|+|+++||++||+|+.|||++|.+. +++..++.. +.++.|+|.|.+.
T Consensus 263 ~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~ 323 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSF--AELRSRIATTEPGTKVKLGLLRNGK 323 (436)
T ss_pred cceEEEEECCCChHHHCCCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCE
Confidence 468999999999999999999999999999999865 566666642 3789999998654
No 285
>4gou_A EHRGS-rhogef; RGS domain, DH domain, PH domain, RHO guanine nucleotide EXC factor, signaling protein, GTPase accelerating protein; 2.30A {Entamoeba histolytica}
Probab=97.27 E-value=0.0025 Score=69.98 Aligned_cols=170 Identities=21% Similarity=0.325 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccccCCCCCccch
Q psy8107 595 SKVIIELIETERTYVKNLNGLLENYLEPLKKETFLSGAEINALFGNILEIVAFQRQFLQNLVEALENEADFHHFDQSSQF 674 (1613)
Q Consensus 595 ~~VI~ELl~TEr~YVkdL~~L~e~yl~pL~~~~iL~~~e~~~LF~NIeeIl~~h~~FL~~Le~~~~~~~~~~~~~~~~~~ 674 (1613)
...++.|+..|-+||.-|..+. .|-+-|.+..++.++-++.+|..|+-++..|+.|...|+++-...
T Consensus 189 kslvesliqdecnyvgvltsls-efseimtkkqilgpdvlkelfdhipvliqhhqkfisslqeakade------------ 255 (518)
T 4gou_A 189 KSLVESLIQDECNYVGVLTSLS-EFSEIMTKKQILGPDVLKELFDHIPVLIQHHQKFISSLQEAKADE------------ 255 (518)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTTCSCHHHHHHHHTTHHHHHHHHHHHHHHHTSTTGGG------------
T ss_pred HHHHHHHHHhhccceeehhhHH-HHHHHHHhhhccChHHHHHHHhhchHHHHHHHHHHHHHHHhhhhH------------
Confidence 3478889999999999998775 578888888899999999999999999999999999987664432
Q ss_pred hhhHhhHHHHHhhhccccchhhHHHhchHHHHHHHhhc-cCC-----------hHHHHHHHhhCCCCCCCCCcccccccc
Q psy8107 675 KNILFSIGSAFLYYVNHFKLYSSFCASHSKAQKVLHPN-EGN-----------QALQEFLSSRNPRQQHSSTLESYLIKP 742 (1613)
Q Consensus 675 ~~~i~~IGdvFl~~~~~fk~Y~~Yc~n~~~a~~~L~~~-~~~-----------~~f~~fl~~~~~~~~~~l~L~slLikP 742 (1613)
.+|.-+..-...+-+|.-|..+-|+..+.+... ..+ +-.++|=++. +..+.++.-.+|.-|
T Consensus 256 -----kvgeklnsglhflvlyryylrhvpkniaklcsigmtdeievgrelyplpvieefdkqq--kmtkkmsvlqmlvyp 328 (518)
T 4gou_A 256 -----KVGEKLNSGLHFLVLYRYYLRHVPKNIAKLCSIGMTDEIEVGRELYPLPVIEEFDKQQ--KMTKKMSVLQMLVYP 328 (518)
T ss_dssp -----SHHHHHHHHTGGGGGGHHHHTTTTHHHHHHHHHHTSCGGGTTTTTCSHHHHHHHHHHH--HHHTSCCHHHHHHGG
T ss_pred -----HHHHhhccCceehHHHHHHHHhccHHHHHHccCCCcchhhccccccCcchHHHHHHHH--HHHHHHHHHHHHhhh
Confidence 277766666666679999999999888777553 222 2234443332 233567788889999
Q ss_pred chhhhchHHHHHHHhhcCCCCCcccchhhhHHHHHHhhhccc
Q psy8107 743 IQRILKYPLLLQQLCNLTDPHCDEHLHLVGVVCLISFLVGLI 784 (1613)
Q Consensus 743 VQRI~KY~LLLkeLLK~T~~dh~Eh~hL~~alclv~fLigLI 784 (1613)
.-|+..|+....+.+|-|..|+.|-..|..+-.-+..+..++
T Consensus 329 yfrvrtyqayvddfikitkkdsqevkelevvhsqlaifqeli 370 (518)
T 4gou_A 329 YFRVRTYQAYVDDFIKITKKDSQEVKELEVVHSQLAIFQELI 370 (518)
T ss_dssp GGHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hheehhHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998877765444443333333
No 286
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.27 E-value=0.0003 Score=86.64 Aligned_cols=58 Identities=21% Similarity=0.255 Sum_probs=49.8
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc---CCeEEEEEeecCC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE---ELSLCMMMRSSRT 447 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~---~~~l~L~vr~~~~ 447 (1613)
.+++|.+|.|+|+|+++||++||.|+.|||++|.+. .++..++.. +.++.|+|.|.+.
T Consensus 282 ~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~V~R~g~ 342 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAGLKAGDIITQINDTKITQA--TQVKTTISLLRVGSTVKIIVERDNK 342 (451)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred ceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCE
Confidence 468999999999999999999999999999999864 667777643 3789999998764
No 287
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.23 E-value=0.00035 Score=83.14 Aligned_cols=58 Identities=22% Similarity=0.179 Sum_probs=50.2
Q ss_pred ceeEEEEecCCChhhhcCCCC-----------CCEEEEEcCeecCCCCHHHHHHHHhc---CCeEEEEEeecCC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIK-----------GDEIMVINGAIVSDLDMMYLESVLQE---ELSLCMMMRSSRT 447 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~-----------GDeIl~vNg~~v~~l~~~~~~~ll~~---~~~l~L~vr~~~~ 447 (1613)
.+++|.+|.|+|+|++|||++ ||.|+.|||++|.+. +++.+.+.. +.++.|+|+|.+.
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~ 322 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTVEVLRGDH 322 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEEEEECSSS
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEEEEEECCE
Confidence 469999999999999999999 999999999999865 678888743 3789999988654
No 288
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.21 E-value=5.1e-05 Score=89.75 Aligned_cols=59 Identities=27% Similarity=0.370 Sum_probs=0.0
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcCCeEEEEEeecCCC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEELSLCMMMRSSRTE 448 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~~~l~L~vr~~~~~ 448 (1613)
.+++|.+|.++|+|+++||++||.|+.|||++|. +.+++.++++.+.++.|+|+|.+..
T Consensus 254 ~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~~v~l~v~R~g~~ 312 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGGLKENDVIISINGQSVV--SANDVSDVIKRESTLNMVVRRGNED 312 (332)
T ss_dssp -------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcCCCCCCEEEEECCEECC--CHHHHHHHHhCCCeEEEEEEECCEE
Confidence 4589999999999999999999999999999996 4567888887678899999886643
No 289
>1c1y_B Proto-onkogene serine/threonine protein kinase RAF-1; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: d.15.1.5 PDB: 1gua_B* 1rfa_A 3kud_B* 3kuc_B*
Probab=97.08 E-value=0.00038 Score=64.01 Aligned_cols=39 Identities=26% Similarity=0.456 Sum_probs=37.0
Q ss_pred eEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCcc
Q psy8107 276 SVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPME 314 (1613)
Q Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~ 314 (1613)
.++|+|||+|-..|.+|||+|+.|.|..++|.|+|.|..
T Consensus 3 ~irvhLPn~QrT~V~VrpG~tlrdaL~KaLk~R~L~pe~ 41 (77)
T 1c1y_B 3 TIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPEC 41 (77)
T ss_dssp EEEEEETTTEEEEEECCTTCBHHHHHHHHHHTTTCCGGG
T ss_pred eEEEECCCCceEEEEecCCcCHHHHHHHHHHHcCCCHHH
Confidence 579999999999999999999999999999999998865
No 290
>1wxm_A A-RAF proto-oncogene serine/threonine-protein kinase; RAS-binding domain (RBD), ubiquitin-like fold, A-RAF kinase, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=97.05 E-value=0.00057 Score=63.96 Aligned_cols=40 Identities=35% Similarity=0.393 Sum_probs=37.8
Q ss_pred ceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCcc
Q psy8107 275 KSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPME 314 (1613)
Q Consensus 275 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~ 314 (1613)
..++|+|||+|-..|.+|||+|+.|.|.-++|.|+|.|..
T Consensus 8 ~~irvhLPn~QrT~V~VrpG~tlrdaL~KaLk~R~L~pe~ 47 (86)
T 1wxm_A 8 GTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDC 47 (86)
T ss_dssp SEEEEECSSSCEEEEECCSSCBSHHHHHHHHHTTTCCSSS
T ss_pred ceEEEECCCCCeEEEEecCCcCHHHHHHHHHHHcCCCHHH
Confidence 4789999999999999999999999999999999999765
No 291
>3ny5_A Serine/threonine-protein kinase B-RAF; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; HET: MSE; 1.99A {Homo sapiens} SCOP: d.15.1.0
Probab=96.79 E-value=0.00095 Score=63.63 Aligned_cols=41 Identities=29% Similarity=0.274 Sum_probs=38.5
Q ss_pred CceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCcc
Q psy8107 274 DKSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPME 314 (1613)
Q Consensus 274 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~ 314 (1613)
...++|+|||+|-..|.+|||+|+.|.|..++|.|+|.|..
T Consensus 13 ~~~irvhLPNqQrT~V~VrpG~tlrdaL~KaLk~R~L~pe~ 53 (96)
T 3ny5_A 13 KPIVRVFLPNKQRTVVPARCGVTVRDSLKKALMMRGLIPEC 53 (96)
T ss_dssp SCEEEEEETTTEEEEEECCTTCBHHHHHHHHHHTTTCCGGG
T ss_pred hCEEEEECCCCceEEEEecCCcCHHHHHHHHHHHcCCChHH
Confidence 46789999999999999999999999999999999998765
No 292
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=96.79 E-value=0.00045 Score=85.01 Aligned_cols=58 Identities=24% Similarity=0.294 Sum_probs=49.6
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhc---CCeEEEEEeecCC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQE---ELSLCMMMRSSRT 447 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~---~~~l~L~vr~~~~ 447 (1613)
.+++|.+|.++|+|+++||++||.|+.|||++|.+. .++..++.. +.++.|+|.|.+.
T Consensus 286 ~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~ 346 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSF--AALRAQVGTMPVGSKLTLGLLRDGK 346 (448)
T ss_dssp CSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSS--HHHHHHTTSSBTTCCCEEEEESSSC
T ss_pred CceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCE
Confidence 468999999999999999999999999999999876 577777753 3788999987653
No 293
>2l05_A Serine/threonine-protein kinase B-RAF; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=96.75 E-value=0.0008 Score=63.95 Aligned_cols=41 Identities=29% Similarity=0.274 Sum_probs=38.2
Q ss_pred CceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCcc
Q psy8107 274 DKSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPME 314 (1613)
Q Consensus 274 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~ 314 (1613)
-..++|+|||+|-..|.+|||+|+.|.|.-++|.|+|.|..
T Consensus 17 ~~~irvhLPNqQrT~V~VrpG~tlrdAL~KaLk~R~L~pe~ 57 (95)
T 2l05_A 17 KPIVRVFLPNKQRTVVPARCGVTVRDSLKKALMMRGLIPEC 57 (95)
T ss_dssp SCEEEEEETTTEEEEEECCTTCBHHHHHHHHHHHHTCCGGG
T ss_pred ccEEEEECCCCCeEEEEecCCcCHHHHHHHHHHHcCCCHHH
Confidence 35789999999999999999999999999999999998765
No 294
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=96.73 E-value=0.00024 Score=87.46 Aligned_cols=58 Identities=26% Similarity=0.317 Sum_probs=0.0
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC-CeEEEEEeecCC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE-LSLCMMMRSSRT 447 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~-~~l~L~vr~~~~ 447 (1613)
.+++|.+|.++|+|+++||++||.|++|||++|. +++++.++++.. ..+.|+|+|.+.
T Consensus 383 ~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~--~~~~l~~~l~~~~~~v~l~v~R~g~ 441 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVK--NIAELRKVLDSKPSVLALNIQRGDS 441 (448)
T ss_dssp -------------------------------------------------------------
T ss_pred CeEEEEEecCCCHHHHcCCCCCCEEEEECCEECC--CHHHHHHHHHcCCCeEEEEEEECCE
Confidence 4589999999999999999999999999999998 567888888643 577888877653
No 295
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=96.65 E-value=0.0022 Score=66.75 Aligned_cols=77 Identities=16% Similarity=0.182 Sum_probs=59.5
Q ss_pred ceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCCCCeEEeecCCHHHHHHHHHH
Q psy8107 23 WKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAFGDAYLFQAPCQVELENWVNS 102 (1613)
Q Consensus 23 Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~dg~~yLFQA~~~~em~~Wi~~ 102 (1613)
||+.|++|+....++|-|+... ..++-|.++.++.... |....|.+.|++ +.|.|.++ ..+.+.|+++
T Consensus 66 ~kkR~liLT~~PrL~Yvdp~~~------~~KGeIpls~~l~ve~----k~~~~F~I~Tp~-RtY~~~d~-~~~AqeWv~a 133 (151)
T 1w1g_A 66 ARRRQLLLTEGPHLYYVDPVNK------VLKGEIPWSQELRPEA----KNFKTFFVHTPN-RTYYLMDP-SGNAHKWCRK 133 (151)
T ss_dssp EEEEEEEEETTTEEEEEETTTT------EEEEEECCCTTCEEEE----SSSSEEEEEETT-EEEEEECT-TSCHHHHHHH
T ss_pred ceeEEEEEcCCceEEEEcCccc------cccceEecCCCeeEEE----cCCCEEEEECCC-ceEEEEcC-ccCHHHHHHH
Confidence 9999999998888888887432 3345666765433222 445699999998 99999998 8889999999
Q ss_pred HHHHHHhhh
Q psy8107 103 IHSACAAAF 111 (1613)
Q Consensus 103 I~~aaa~~~ 111 (1613)
|+.+....+
T Consensus 134 I~~~~~~~~ 142 (151)
T 1w1g_A 134 IQEVWRQRY 142 (151)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999987544
No 296
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.35 E-value=0.0047 Score=83.41 Aligned_cols=67 Identities=18% Similarity=0.099 Sum_probs=55.3
Q ss_pred CCccceEEEEeecccccccCcceeEEEEecCC--------ChhhhcC--CCCCCEEEEEcCeecCCCCHHHHHHHHhcC-
Q psy8107 367 DHMWGFSVEAELTENAERQDELCCYVSRVEDK--------SVAMHNG--LIKGDEIMVINGAIVSDLDMMYLESVLQEE- 435 (1613)
Q Consensus 367 ~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~g--------g~A~~~G--L~~GDeIl~vNg~~v~~l~~~~~~~ll~~~- 435 (1613)
.++.|+.+.- .+ .+++|.+|.|| |||+++| |+ ||+|+.|||+++.+++ ++.++|++.
T Consensus 736 ~~g~G~~~~~--~~-------~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~ 803 (1045)
T 1k32_A 736 SGRIACDFKL--DG-------DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKA 803 (1045)
T ss_dssp CCBCSEEEEE--ET-------TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTT
T ss_pred cceecEEEEE--eC-------CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCC
Confidence 3578888765 11 34899999998 9999999 99 9999999999999886 777888543
Q ss_pred -CeEEEEEeec
Q psy8107 436 -LSLCMMMRSS 445 (1613)
Q Consensus 436 -~~l~L~vr~~ 445 (1613)
.++.|+|+|.
T Consensus 804 g~~v~l~v~r~ 814 (1045)
T 1k32_A 804 GTSARIRLSGK 814 (1045)
T ss_dssp TSEEEEEEECS
T ss_pred CCEEEEEEECC
Confidence 7899999764
No 297
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=96.11 E-value=0.0082 Score=65.95 Aligned_cols=85 Identities=13% Similarity=0.276 Sum_probs=66.0
Q ss_pred cCCCceEEEEEEeC------C-eEEEecCCCcCCCCCCCCCCceeEeCceE-EeeCCCCCCCCceEEEEcCCCCeEEeec
Q psy8107 19 RKRGWKGYWVCLKG------T-TLLFYPCDSREGRSVDAAPKHLIIVDGAI-MQPIPEHPKRDYIFCLSTAFGDAYLFQA 90 (1613)
Q Consensus 19 ~~R~Wk~~~~vLkG------~-~L~fyKd~~~~~~~~~~~p~~~I~l~~~~-~~~a~dy~KK~nVF~L~t~dg~~yLFQA 90 (1613)
.+++||+.|+||+- + .|.+|||.....+. ..++..|+|.|.. .+...++.|+.|++-+-+.|- .+.|..
T Consensus 19 ~~KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~--~~~KaslsL~~~~GlE~g~~ldk~s~TlAIIc~d~-~~vLAF 95 (224)
T 3ml4_A 19 DGKKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKG--LRERSSLTLEDICGLEPALPYEGLAHTLAIICLSQ-AVMLGF 95 (224)
T ss_dssp ---CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSC--CCCSEEEEECCEEEEEEEEEETTEEEEEEEEESSC-EEEEEC
T ss_pred cCCceeeEEEEEEcCCCchheEEEEEEcChhhhhcC--CcccceeehHHhcCccccccccCcccEEEEEecCc-EEEEEe
Confidence 34579999999984 2 78999998754332 3456689999864 555579999999999988885 459999
Q ss_pred CCHHHHHHHHHHHHHH
Q psy8107 91 PCQVELENWVNSIHSA 106 (1613)
Q Consensus 91 ~~~~em~~Wi~~I~~a 106 (1613)
++.++|..|-..|...
T Consensus 96 ds~e~l~~W~~~l~~s 111 (224)
T 3ml4_A 96 DSHEAMCAWDTRIRYA 111 (224)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhc
Confidence 9999999999988753
No 298
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.09 E-value=0.015 Score=58.49 Aligned_cols=91 Identities=12% Similarity=0.150 Sum_probs=65.7
Q ss_pred cceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeC-CC-----CCCCCceEEE
Q psy8107 5 KKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPI-PE-----HPKRDYIFCL 78 (1613)
Q Consensus 5 Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a-~d-----y~KK~nVF~L 78 (1613)
.||+++-..+. ..||+.|.+|-+..+.+|+++.. ..+-..|.|..-+.... .+ -.-.+|.|.+
T Consensus 11 eGW~VH~t~~d-----~~rKRHYWrLD~K~Itlf~~e~~------~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi 79 (125)
T 2coa_A 11 EGWVVHYSNKD-----TLRKRHYWRLDCKCITLFQNNTT------NRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEI 79 (125)
T ss_dssp EEEEEECCSSS-----CCCEEEEEEECSSEEEEESSSSC------SSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEE
T ss_pred cceEEEEccCC-----ccccceeeEecCCeEEEEecCCC------CceeeeeehhHeecccccccccccCCCCCCceEEE
Confidence 48998876553 35899999999999999999733 33444566665433333 22 2237899999
Q ss_pred EcCCCCeEEeecC-----------CHHHHHHHHHHHHHHH
Q psy8107 79 STAFGDAYLFQAP-----------CQVELENWVNSIHSAC 107 (1613)
Q Consensus 79 ~t~dg~~yLFQA~-----------~~~em~~Wi~~I~~aa 107 (1613)
.|+ ...|+-++. ..+.+.+|.++|..|.
T Consensus 80 ~T~-~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqAL 118 (125)
T 2coa_A 80 VTA-NATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL 118 (125)
T ss_dssp ECS-SCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred EeC-CeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhc
Confidence 996 678888873 1367999999999873
No 299
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.04 E-value=0.031 Score=56.47 Aligned_cols=91 Identities=14% Similarity=0.175 Sum_probs=65.7
Q ss_pred cceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCC-CC-----CCCCceEEE
Q psy8107 5 KKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIP-EH-----PKRDYIFCL 78 (1613)
Q Consensus 5 Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~-dy-----~KK~nVF~L 78 (1613)
.||+++-..+- ..||+.|-+|-+..+.+|+++.. .....-|.|.+-+..... +. .-.+|.|.+
T Consensus 11 eGWmVH~t~~d-----~~rKRHYWrLD~K~Itlf~~e~~------~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi 79 (129)
T 2d9z_A 11 EGWMVHYTSRD-----NLRKRHYWRLDSKCLTLFQNESG------SKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEI 79 (129)
T ss_dssp EEEEEEEESSC-----CCCEEEEEEEESSCEEEESCSSC------CSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEE
T ss_pred cceEEEEccCC-----ccccceeeEecCCeEEEEecCCC------CceeceeeHHHhcccccccCccccCCCCCCceEEE
Confidence 48888865542 34999999999999999998733 233445666655444432 22 235699999
Q ss_pred EcCCCCeEEeecCC---------------HHHHHHHHHHHHHHH
Q psy8107 79 STAFGDAYLFQAPC---------------QVELENWVNSIHSAC 107 (1613)
Q Consensus 79 ~t~dg~~yLFQA~~---------------~~em~~Wi~~I~~aa 107 (1613)
.|+ ..+|+-++.. .+.+++|.++|..|.
T Consensus 80 ~T~-~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqAL 122 (129)
T 2d9z_A 80 ITD-TMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQAL 122 (129)
T ss_dssp ECS-SCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHH
T ss_pred EEC-CEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhc
Confidence 995 6889988743 799999999999884
No 300
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=95.86 E-value=0.0087 Score=74.85 Aligned_cols=60 Identities=23% Similarity=0.094 Sum_probs=47.7
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCC-----------HHHHHHHHhcCCeEEEEEeecCCC
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLD-----------MMYLESVLQEELSLCMMMRSSRTE 448 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~-----------~~~~~~ll~~~~~l~L~vr~~~~~ 448 (1613)
.+++|.+|.|||+|+++ |++||.|+.|||++|.... +..+....+-+.++.|+|.|.+..
T Consensus 277 ~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~ 347 (539)
T 4fln_A 277 EGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEH 347 (539)
T ss_dssp BCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEE
T ss_pred CceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEE
Confidence 57999999999999876 9999999999999996532 334444444458999999997753
No 301
>1rrb_A RAF-1 RBD, RAF proto-oncogene serine/threonine-protein kinase; RAS-binding domain, transferase, riken structural genomics/proteomics initiative; NMR {Rattus norvegicus} SCOP: d.15.1.5
Probab=95.76 E-value=0.0067 Score=58.82 Aligned_cols=40 Identities=25% Similarity=0.451 Sum_probs=37.6
Q ss_pred ceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCcc
Q psy8107 275 KSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPME 314 (1613)
Q Consensus 275 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~ 314 (1613)
..++|+|||+|-..|-||||+|+.|.|..+-|.|+|.|..
T Consensus 19 ~~ir~hLPNqQrT~V~VrpG~tlrdaL~KaLk~R~L~pe~ 58 (107)
T 1rrb_A 19 NTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPEC 58 (107)
T ss_dssp CEEEEECTTTCCEEEECCTTCBHHHHHHHHHHHHTCCTTT
T ss_pred ceEEEECCCCCeEEEEecCCcCHHHHHHHHHHHcCCCHHH
Confidence 3689999999999999999999999999999999999765
No 302
>2al3_A TUG long isoform; TUG UBL1 insulin, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: d.15.1.2
Probab=94.97 E-value=0.019 Score=54.70 Aligned_cols=45 Identities=24% Similarity=0.435 Sum_probs=41.7
Q ss_pred eEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccceeeee
Q psy8107 276 SVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFVRVK 320 (1613)
Q Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~~~~ 320 (1613)
++-|..||++..+|-+-|++|+.|||+.+|++.++||..|.|+-+
T Consensus 11 ~v~Vl~~n~rr~~VKvtp~t~L~~VL~eaC~K~gl~~~~~~Lkh~ 55 (90)
T 2al3_A 11 AVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPSEYDLKFQ 55 (90)
T ss_dssp CEEEECTTSCEEEECCCTTSBHHHHHHHHHHHTTCCGGGCEEEET
T ss_pred EEEEEcCCCcEEEEEECCCCCHHHHHHHHHHHhCCChhhCeEEeC
Confidence 678999999999999999999999999999999999999977643
No 303
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=94.69 E-value=0.072 Score=54.62 Aligned_cols=83 Identities=12% Similarity=0.258 Sum_probs=62.5
Q ss_pred ceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCCCCeEEeecCCHHHHHHHHHH
Q psy8107 23 WKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAFGDAYLFQAPCQVELENWVNS 102 (1613)
Q Consensus 23 Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~dg~~yLFQA~~~~em~~Wi~~ 102 (1613)
|.+| ++|=.+.|++.+...+ .....-++-+++.+-.+....|-...+|.|.+.-+..+.++|.|.+.+|++.|+.+
T Consensus 45 ~eR~-l~LF~~~Ll~~s~~~~---~~~f~~kgklPL~g~~V~~~ed~~~~~~aFeI~g~~~~~i~v~~~s~eE~~~Wl~~ 120 (132)
T 1v61_A 45 EERY-FLLFSSVLIMLSASPR---MSGFMYQGKIPIAGMVVNRLDEIEGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQ 120 (132)
T ss_dssp CEEE-EEECSSCEEEEECSSS---SSCCEEEEEECTTTCBCSTTCSSSSSCCCEEEECSSSCEEEECCCCSHHHHHHHHH
T ss_pred eEEE-EEEcCCeEEEEEecCC---CceEEEEEEEecceeEEEeccccccCccEEEEecCCCceEEEEeCCHHHHHHHHHH
Confidence 5555 6666555544443221 12344566788888877777776778999999999989999999999999999999
Q ss_pred HHHHHHh
Q psy8107 103 IHSACAA 109 (1613)
Q Consensus 103 I~~aaa~ 109 (1613)
|+.++..
T Consensus 121 L~~~i~~ 127 (132)
T 1v61_A 121 LNRLTKS 127 (132)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9998774
No 304
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=94.64 E-value=0.19 Score=51.93 Aligned_cols=86 Identities=14% Similarity=0.126 Sum_probs=61.2
Q ss_pred CceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC-C----CeEEeecCCHHHH
Q psy8107 22 GWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF-G----DAYLFQAPCQVEL 96 (1613)
Q Consensus 22 ~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d-g----~~yLFQA~~~~em 96 (1613)
+=.+.++-|=.+.|.+-|-..+.+......-++.+.+.|-.+....+. .-+|-|+|..+. | ....|+|+++.|+
T Consensus 32 g~qqR~~FLFND~LL~TK~~~kkk~~~~Y~vr~~~~L~gm~V~~~e~e-~~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER 110 (140)
T 3qwm_A 32 GLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQ-YYPNGIRLTSSVPGADIKVLINFNAPNPQDR 110 (140)
T ss_dssp TTTEEEEEEESSCEEEEECCC---CCCCCCCEEEECCTTEEEEEECCS-SCTTEEEEEECCTTSCCEEEEEEECSSHHHH
T ss_pred cccceEEEEecchhhheeecccCCCCCceEEEEEeeecceEEEcccCC-CCceEEEEEecCCCCcceEEEEEECCCHHHH
Confidence 345666666666666655222222334456667888998877666432 369999998765 6 6799999999999
Q ss_pred HHHHHHHHHHHH
Q psy8107 97 ENWVNSIHSACA 108 (1613)
Q Consensus 97 ~~Wi~~I~~aaa 108 (1613)
..||.+|+.|++
T Consensus 111 ~rwi~dL~esI~ 122 (140)
T 3qwm_A 111 KKFTDDLRESIA 122 (140)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999987
No 305
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=94.20 E-value=0.12 Score=51.63 Aligned_cols=80 Identities=18% Similarity=0.165 Sum_probs=55.4
Q ss_pred EEEEEEeCCeEEE-ecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCCCCeEEeecCCHHHHHHHHHHH
Q psy8107 25 GYWVCLKGTTLLF-YPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAFGDAYLFQAPCQVELENWVNSI 103 (1613)
Q Consensus 25 ~~~~vLkG~~L~f-yKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~dg~~yLFQA~~~~em~~Wi~~I 103 (1613)
+.|+.|=.+.|.+ .+...+.+. ..-...+++.+..++-.+|-..-+|.|++.+.. ..|+|||++.+|...|+.+|
T Consensus 27 ~v~~FLfND~Ll~a~~~~~~~~~---~~~~~~~~L~~~~v~d~~d~~~~~n~f~i~~~~-~s~~~~aes~~eK~~Wl~~~ 102 (113)
T 1zc3_B 27 RVHGFLMNDCLLVATWLPQRRGM---YRYNALYPLDRLAVVNVKDNPPMKDMFKLLMFP-ESRIFQAENAKIKREWLEVL 102 (113)
T ss_dssp EEEEEEESSEEEEEEEECCTTSC---EEEEEEEETTTCEEEEECCBTTBSSEEEEEETT-EEEEEECSSHHHHHHHHHHH
T ss_pred cEEEEecCCEEEEEEEeccCccc---EEEEEEEEcccCEEEECCCCcccceEEEEEeCC-ceEEEEcCCHHHHHHHHHHH
Confidence 4566666555554 443221111 122234677766666667777789999999866 57999999999999999999
Q ss_pred HHHHH
Q psy8107 104 HSACA 108 (1613)
Q Consensus 104 ~~aaa 108 (1613)
+.|..
T Consensus 103 ~~a~~ 107 (113)
T 1zc3_B 103 EETKR 107 (113)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
No 306
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=93.99 E-value=0.36 Score=58.27 Aligned_cols=86 Identities=15% Similarity=0.016 Sum_probs=63.7
Q ss_pred CCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCC------CCCceEEEEcCC-CCeEEeecCCH
Q psy8107 21 RGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHP------KRDYIFCLSTAF-GDAYLFQAPCQ 93 (1613)
Q Consensus 21 R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~------KK~nVF~L~t~d-g~~yLFQA~~~ 93 (1613)
.+++..|+.|=.+.|.+-|..... .....-++.|.+.+..+....|-. .-+|.|+|...+ +..|.|+|+++
T Consensus 271 ~k~~~r~~fLF~d~Ll~~k~~~~~--~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~ 348 (402)
T 2dfk_A 271 GRNQQRVFFLFDHQMVLCKKDLIR--RDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKL 348 (402)
T ss_dssp CCCEEEEEEEETTEEEEEEECSSC--TTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEESSSSCEEEEECSSH
T ss_pred CceEEEEEEeeCCEEEEEEecccc--CCceEEeeeeeccceEEEecCCCCccccccccceeEEEEECCCCeEEEEEeCCH
Confidence 347889999999998888754321 111223457888887776655432 236899999876 57899999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy8107 94 VELENWVNSIHSACA 108 (1613)
Q Consensus 94 ~em~~Wi~~I~~aaa 108 (1613)
+|.+.|+.+|+.|..
T Consensus 349 ~eK~~Wi~~i~~a~~ 363 (402)
T 2dfk_A 349 EEKIRWLRAFREERK 363 (402)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998866
No 307
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=93.74 E-value=0.53 Score=58.00 Aligned_cols=117 Identities=8% Similarity=0.140 Sum_probs=61.7
Q ss_pred HHHHHHHHhhhcccccceeeeeehhh----HHHHHHHHHHHHhccCCChhccce---eeeccccccccChhHHHHHHhhH
Q psy8107 1011 LAWIIVFFIVMKGIQSSGRVVYFTSM----FPYIVLTIFFIRGITLPGAGAGLV---HMYTPKVEKLLDPNVWLDAATQV 1083 (1613)
Q Consensus 1011 l~w~iv~~~v~kGI~~~gKv~~~~~l----~P~vlL~iLlir~ltL~Ga~~Gl~---~lf~Pd~s~L~~~~vW~~A~~Qa 1083 (1613)
+..+++.++...|++..+++..+... +++++++++.+..+. +|...+.. -.+.|++.. ...| .++..+
T Consensus 136 ~~~~~~~~in~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~ 210 (511)
T 4djk_A 136 IILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLH-SGAPVAIEMDSKTFFPDFSK---VGTL-VVFVAF 210 (511)
T ss_dssp HHHHHHHHHHHTCSSSHHHHTHHHHHHTTHHHHHHHHHHHHHHTC-------------CCCCCTTS---TTTT-TTHHHH
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcccccCcccccCCCccc---chHH-HHHHHH
Confidence 33444556677899988887554322 233333333222221 22111111 112344432 2223 456778
Q ss_pred HHhhcccccceehhccccCC-CCccccceehhhhhHHHHHHHHHHHHHhhh
Q psy8107 1084 FYSFGLAFGSLIAFGSYNQP-NNNCVRDVIMVSICNALTAIYASVVVFAIL 1133 (1613)
Q Consensus 1084 FfSLslG~G~mitygSY~~~-~~ni~rda~~v~~~n~~vSllAgl~IFsil 1133 (1613)
+|++ .|+.....++...+. +.|+.|..++..++.+++.++..+++...+
T Consensus 211 ~~a~-~G~e~~~~~a~E~k~P~k~ip~ai~~~~~~~~~~y~~~~~~~~~~~ 260 (511)
T 4djk_A 211 ILSY-MGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVI 260 (511)
T ss_dssp HHHH-TTGGGGTGGGSSSSCCTTTHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHH-hhHHHHHHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHeec
Confidence 8888 588888888887765 566777766666666666666655554443
No 308
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=93.29 E-value=0.19 Score=59.51 Aligned_cols=87 Identities=10% Similarity=0.109 Sum_probs=67.7
Q ss_pred CceEEEEEEeCCeEEEecCCCcCC-----CCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCCCCeEEeecCCHHHH
Q psy8107 22 GWKGYWVCLKGTTLLFYPCDSREG-----RSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAFGDAYLFQAPCQVEL 96 (1613)
Q Consensus 22 ~Wk~~~~vLkG~~L~fyKd~~~~~-----~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~dg~~yLFQA~~~~em 96 (1613)
+++.+++.|=.+.|.+-|...... ......-+..|.+.+..+....|-..-+|.|.+...++..|.|+|++.+|.
T Consensus 258 ~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~~l~a~s~~ek 337 (354)
T 1dbh_A 258 AKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEK 337 (354)
T ss_dssp CSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCSSSCCSEEEECCTTSCCEEEECSSHHHH
T ss_pred cCceEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCcccccCccEEEecCCCCEEEEEeCCHHHH
Confidence 467888999998888877653211 111223356889998888777776567899999998888999999999999
Q ss_pred HHHHHHHHHHHH
Q psy8107 97 ENWVNSIHSACA 108 (1613)
Q Consensus 97 ~~Wi~~I~~aaa 108 (1613)
+.|+.+|+.+.+
T Consensus 338 ~~W~~~i~~~~~ 349 (354)
T 1dbh_A 338 NNWMAALISLQY 349 (354)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999998854
No 309
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=93.17 E-value=0.11 Score=65.00 Aligned_cols=53 Identities=13% Similarity=0.187 Sum_probs=45.2
Q ss_pred ceeEEEEecCCChhhhcCCCCCCEEEEEcCeecCCCCHHHHHHHHhcC--CeEEEEE
Q psy8107 388 LCCYVSRVEDKSVAMHNGLIKGDEIMVINGAIVSDLDMMYLESVLQEE--LSLCMMM 442 (1613)
Q Consensus 388 ~~~~Vs~V~~gg~A~~~GL~~GDeIl~vNg~~v~~l~~~~~~~ll~~~--~~l~L~v 442 (1613)
.++.|++|.|+++|.++|+++||.|++|||++|.+ ++++.++++++ +-+.+.+
T Consensus 415 ~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s--~~~l~~~l~~~k~~~l~~~~ 469 (539)
T 4fln_A 415 QIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRN--IHHLAHLIDMCKDKYLVFEF 469 (539)
T ss_dssp CCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCS--HHHHHHHHHTCCSSEEEEEE
T ss_pred eEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCC--HHHHHHHHHHcCCCeEEEEE
Confidence 46899999999999999999999999999999985 67899999666 4455544
No 310
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=91.87 E-value=0.32 Score=59.11 Aligned_cols=82 Identities=15% Similarity=0.163 Sum_probs=59.1
Q ss_pred CCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCCCCeEEeecCCHHHHHHHH
Q psy8107 21 RGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAFGDAYLFQAPCQVELENWV 100 (1613)
Q Consensus 21 R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~dg~~yLFQA~~~~em~~Wi 100 (1613)
++++..|+.|-.+.|.+-|.... .....+..|.+.+..++...+ .+.+|.|.+.+++. .|.|+|.+.+|.+.|+
T Consensus 256 ~~~~~r~~fLF~d~Ll~~k~~~~----~~y~~k~~i~L~~l~v~~~~~-~~~~~~f~i~~~~~-~~~l~a~s~~ek~~W~ 329 (434)
T 3mpx_A 256 KNRRPRHLFLMNDVLLYTYPQKD----GKYRLKNTLAVANMKVSRPVM-EKVPYALKIETSES-CLMLSASSCAERDEWY 329 (434)
T ss_dssp TEEEEEEEEEESSEEEEEEECTT----SCEEEEEEEEC-----CCCCC-TTSCSEEEEECSSC-EEEEECSSHHHHHHHH
T ss_pred CCceEEEEEEECCEEEEEEecCC----CeEEEEEEEEcCCcEEEecCC-CCCCeeEEEecCCe-EEEEecCCHHHHHHHH
Confidence 35788999999999999885432 223345678888877764433 36799999988764 7999999999999999
Q ss_pred HHHHHHHH
Q psy8107 101 NSIHSACA 108 (1613)
Q Consensus 101 ~~I~~aaa 108 (1613)
++|+.|+.
T Consensus 330 ~~i~~ai~ 337 (434)
T 3mpx_A 330 GCLSRALP 337 (434)
T ss_dssp HHHHHC--
T ss_pred HHHHHHHH
Confidence 99998865
No 311
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=91.20 E-value=1.6 Score=52.60 Aligned_cols=118 Identities=12% Similarity=0.116 Sum_probs=65.3
Q ss_pred HHHHHHHHHhhhcccccceeeeeehhhHHHHHHHHHHHHhccCCChhccceeeecccccc--ccChhHHHHHHhhHHHhh
Q psy8107 1010 LLAWIIVFFIVMKGIQSSGRVVYFTSMFPYIVLTIFFIRGITLPGAGAGLVHMYTPKVEK--LLDPNVWLDAATQVFYSF 1087 (1613)
Q Consensus 1010 ~l~w~iv~~~v~kGI~~~gKv~~~~~l~P~vlL~iLlir~ltL~Ga~~Gl~~lf~Pd~s~--L~~~~vW~~A~~QaFfSL 1087 (1613)
++..+++......|+|..+++..+...+-++.++++.+.++...+.. .+.++|.. ..+...+..|+..++|++
T Consensus 130 ~~~~~~~~~in~~g~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~af 204 (445)
T 3l1l_A 130 VVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGE-----TYMAAWNVSGLGTFGAIQSTLNVTLWSF 204 (445)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCCC-----CCCCC-----------HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChh-----hcccccCccCCccHHHHHHHHHHHHHHH
Confidence 33444555666789999988755444333333333434333221111 11122211 112456778888999998
Q ss_pred cccccceehhccccCC-CCccccceehhhhhHHHHHHHHHHHHHhhh
Q psy8107 1088 GLAFGSLIAFGSYNQP-NNNCVRDVIMVSICNALTAIYASVVVFAIL 1133 (1613)
Q Consensus 1088 slG~G~mitygSY~~~-~~ni~rda~~v~~~n~~vSllAgl~IFsil 1133 (1613)
.|+.....++...+. +.|+.|..+...+..+++-++..++++..+
T Consensus 205 -~G~e~~~~~~~e~k~p~r~ip~a~~~~~~~~~~~y~~~~~~~~~~~ 250 (445)
T 3l1l_A 205 -IGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMI 250 (445)
T ss_dssp -TTTTHHHHGGGGBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred -HhHHHHHHHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 788888888888776 456777766666666666555555555444
No 312
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=91.10 E-value=0.42 Score=56.31 Aligned_cols=84 Identities=15% Similarity=0.151 Sum_probs=61.5
Q ss_pred eEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCC---------------CCCceEEEEcC---CCCe
Q psy8107 24 KGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHP---------------KRDYIFCLSTA---FGDA 85 (1613)
Q Consensus 24 k~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~---------------KK~nVF~L~t~---dg~~ 85 (1613)
+.+|+.|=.+.|.+-|.....+......-+..|.+.+..++...|-. +-+|.|.+... .+..
T Consensus 244 ~~~~~fLF~d~Ll~~k~~~~~~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~~~~~~F~i~~~~~~~~~~ 323 (346)
T 2z0q_A 244 VKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKNFFRVSFKNGSQSQT 323 (346)
T ss_dssp CEEEEEEESSEEEEEEEEEETTEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSSEEEEEECCGGGCEE
T ss_pred cEEEEEECCCcEEEEEEeccCCceeeeeecCCcchhhceeeecCCCccccCccccccccCCcccccceEEEEecCCCCce
Confidence 67889999998888875432211111113457888888777776542 24789999864 3679
Q ss_pred EEeecCCHHHHHHHHHHHHHHH
Q psy8107 86 YLFQAPCQVELENWVNSIHSAC 107 (1613)
Q Consensus 86 yLFQA~~~~em~~Wi~~I~~aa 107 (1613)
|.|+|++.+|.+.|+++|+.|.
T Consensus 324 ~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 324 HSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp EEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHhh
Confidence 9999999999999999999874
No 313
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=90.44 E-value=0.76 Score=53.34 Aligned_cols=86 Identities=13% Similarity=0.109 Sum_probs=60.9
Q ss_pred CCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcC----CCCeEEeecCCHHHH
Q psy8107 21 RGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTA----FGDAYLFQAPCQVEL 96 (1613)
Q Consensus 21 R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~----dg~~yLFQA~~~~em 96 (1613)
++.+..++.|=.+.|.+-|............-++.|.+.+..+....+ ..++.|.+... ....|.|+|+|++|.
T Consensus 219 ~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~~v~e~~~--~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek 296 (311)
T 1nty_A 219 RKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVE--GDPCKFALWVGRTPTSDNKIVLKASSIENK 296 (311)
T ss_dssp CCEEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGEEEECCCT--TCTTEEEEEESSSCCTTTCEEEECSSHHHH
T ss_pred cccceeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccceeeEEccC--CCCceEEEEeCCCCCCCceEEEECCCHHHH
Confidence 456889999999888887754321111122334567887776654332 34688999762 356799999999999
Q ss_pred HHHHHHHHHHHH
Q psy8107 97 ENWVNSIHSACA 108 (1613)
Q Consensus 97 ~~Wi~~I~~aaa 108 (1613)
+.|+.+|+.|+.
T Consensus 297 ~~W~~~i~~~i~ 308 (311)
T 1nty_A 297 QDWIKHIREVIQ 308 (311)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 314
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=89.74 E-value=0.85 Score=59.35 Aligned_cols=93 Identities=25% Similarity=0.336 Sum_probs=58.7
Q ss_pred cceEEecccccccccCCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceE-EeeCCCCCCCCceEEEEcCCC
Q psy8107 5 KKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAI-MQPIPEHPKRDYIFCLSTAFG 83 (1613)
Q Consensus 5 Kg~L~~K~~k~~~~~~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~-~~~a~dy~KK~nVF~L~t~dg 83 (1613)
||||.....- ..+.+=|.||+||.-.+|.||||+.... -+..+++.+.- -+....+-.++|+|.|..+++
T Consensus 543 ~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (772)
T 3zvr_A 543 KGWLTINNIG---IMKGGSKEYWFVLTAENLSWYKDDEEKE------KKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQ 613 (772)
T ss_dssp EEEEEESSSC---CC---CCEEEEEEESSEEEEESSTTCCC------EEEEEECTTEEEEEC-------CEEEEEEETTS
T ss_pred eeeeeecccc---cccCCCccceeeccccccccccchhhhc------ccccccccccccchhhhccccccccccccCCcc
Confidence 5566554321 2233468999999999999999975432 33456665442 222344557889999999987
Q ss_pred C-------eEEeecCCHHHHHHHHHHHHHH
Q psy8107 84 D-------AYLFQAPCQVELENWVNSIHSA 106 (1613)
Q Consensus 84 ~-------~yLFQA~~~~em~~Wi~~I~~a 106 (1613)
+ ..=+.|+++++..+|..+.-.|
T Consensus 614 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 643 (772)
T 3zvr_A 614 RNVYKDYRQLELACETQEEVDSWKASFLRA 643 (772)
T ss_dssp SCSBTTBSEEEEEESSHHHHHHHHHHHHHT
T ss_pred ccccchhhhhhhhccccccchhhHHhhhhc
Confidence 6 3347899999999998877433
No 315
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=89.65 E-value=1.1 Score=55.06 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=63.7
Q ss_pred CCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCC------CCCceEEEEcCC-CCeEEeecCCH
Q psy8107 21 RGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHP------KRDYIFCLSTAF-GDAYLFQAPCQ 93 (1613)
Q Consensus 21 R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~------KK~nVF~L~t~d-g~~yLFQA~~~ 93 (1613)
.+++..|+.|=.+.|.+-|..... .....-++.|.+.+..+....|-. .-+|.|+|...+ ...|.|+|+++
T Consensus 348 ~~~~~r~~fLF~d~Ll~~k~~~~~--~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~ 425 (466)
T 2pz1_A 348 AKSQQRMFFLFDHQLIYCKKDLLR--RDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKP 425 (466)
T ss_dssp CCEEEEEEEEETTEEEEEEECSSC--TTCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEECSSSCCEEEEEESSH
T ss_pred CCeeEEEEEEECCEEEEEEecccc--CCceEEeeeeeccceEEEeCCCCcccccccccceeEEEEeCCCCeEEEEEeCCH
Confidence 347888999999988888754321 112233467888887776554432 236899999876 57899999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy8107 94 VELENWVNSIHSACA 108 (1613)
Q Consensus 94 ~em~~Wi~~I~~aaa 108 (1613)
+|.+.|+++|+.+..
T Consensus 426 ~eK~~W~~~i~~a~~ 440 (466)
T 2pz1_A 426 EQKQRWLKAFARERE 440 (466)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998865
No 316
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=89.63 E-value=0.62 Score=59.08 Aligned_cols=84 Identities=14% Similarity=0.169 Sum_probs=64.2
Q ss_pred CCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCC----CCCCCceEEEEcCCC-CeEEeecCCHH
Q psy8107 20 KRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPE----HPKRDYIFCLSTAFG-DAYLFQAPCQV 94 (1613)
Q Consensus 20 ~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~d----y~KK~nVF~L~t~dg-~~yLFQA~~~~ 94 (1613)
+++++.+|+.|=.+.|.+-|.. ......+..|.+.+..+....+ -.+-+|.|.|.+.+| ..|.|+|++.+
T Consensus 419 ~~~~~~r~~fLF~d~Ll~~k~~-----~~~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~~~~L~A~S~e 493 (587)
T 3ky9_A 419 RRSKMDRYAFLLDKALLICKRR-----GDSYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTRE 493 (587)
T ss_dssp CCSCEEEEEEEETTEEEEEEEE-----TTEEEEEEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC---CEEEESSHH
T ss_pred CCCcceEEEEEECCEEEEEEec-----CCEEEeeeeechhhceeeecCCCCcccccccceeEEEEcCCCceEEEEeCCHH
Confidence 3568899999999998888754 1223356788888887776643 345689999999875 78999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy8107 95 ELENWVNSIHSACA 108 (1613)
Q Consensus 95 em~~Wi~~I~~aaa 108 (1613)
|.+.|+++|+.|..
T Consensus 494 eK~~Wi~~I~~ai~ 507 (587)
T 3ky9_A 494 LKKKWMEQFEMAIS 507 (587)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998865
No 317
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=89.60 E-value=0.75 Score=55.43 Aligned_cols=84 Identities=13% Similarity=0.120 Sum_probs=61.6
Q ss_pred CCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCC----CCCCCceEEEEcC-CCCeEEeecCCHH
Q psy8107 20 KRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPE----HPKRDYIFCLSTA-FGDAYLFQAPCQV 94 (1613)
Q Consensus 20 ~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~d----y~KK~nVF~L~t~-dg~~yLFQA~~~~ 94 (1613)
+++++..|+.|=.+.|.+-|... ....-+..|.+.+..+....+ ..+-+|.|.|.+. ....|.|+|++++
T Consensus 247 ~~~~~~~~~fLF~d~Ll~~k~k~-----~~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~ 321 (406)
T 2vrw_B 247 RRSKTDRYAFLLDKALLICKRRG-----DSYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGYELFFKTRE 321 (406)
T ss_dssp CCSCEEEEEEEESSEEEEEEEET-----TEEEEEEEEETTTEEEEC--------CTTCEEEEEEETTCSCEEEEEESSHH
T ss_pred CCccceEEEEecCCEEEEEEecC-----CceEEEEEecccceeeeecCCCCccCCccceeeEEEecCCCceEEEeCCCHH
Confidence 45678999999999888887641 122334577888776654433 2355799999875 4568999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy8107 95 ELENWVNSIHSACA 108 (1613)
Q Consensus 95 em~~Wi~~I~~aaa 108 (1613)
|.+.|+++|+.|+.
T Consensus 322 ek~~W~~~i~~ai~ 335 (406)
T 2vrw_B 322 LKKKWMEQFEMAIS 335 (406)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998865
No 318
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=89.57 E-value=0.71 Score=55.77 Aligned_cols=119 Identities=13% Similarity=0.204 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHhhhcccccceeeeeehhhHHHHHHHHHHHHhccCCChhccceeeeccccccccChhHHHHHHhhHHHh
Q psy8107 1007 LCLLLAWIIVFFIVMKGIQSSGRVVYFTSMFPYIVLTIFFIRGITLPGAGAGLVHMYTPKVEKLLDPNVWLDAATQVFYS 1086 (1613)
Q Consensus 1007 l~l~l~w~iv~~~v~kGI~~~gKv~~~~~l~P~vlL~iLlir~ltL~Ga~~Gl~~lf~Pd~s~L~~~~vW~~A~~QaFfS 1086 (1613)
+..++..+++.....+|+|..+|+..+...+-++.++++++.++...+.. .+.|++..- ....+..|+..++|+
T Consensus 127 ~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~i~~~~~~ii~~~~~~~~~-----~~~~~~~~~-g~~~~~~~~~~~~~a 200 (444)
T 3gia_A 127 ITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPS-----YVIPDLAPS-AVSGMIFASAIFFLS 200 (444)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCGG-----GTSCCCSHH-HHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChh-----hcCCCCCCc-chHHHHHHHHHHHHH
Confidence 33444445566677789999888765544433333333333332211111 123322110 113456677777777
Q ss_pred hcccccceehhccccCCC-CccccceehhhhhHHHHHHHHHHHHHhh
Q psy8107 1087 FGLAFGSLIAFGSYNQPN-NNCVRDVIMVSICNALTAIYASVVVFAI 1132 (1613)
Q Consensus 1087 LslG~G~mitygSY~~~~-~ni~rda~~v~~~n~~vSllAgl~IFsi 1132 (1613)
+. |+.....++...+.- .|+.|..++..+..+++-++..+++...
T Consensus 201 ~~-G~e~~~~~~~e~k~P~r~ip~ai~~~~~~~~~~y~~~~~~~~~~ 246 (444)
T 3gia_A 201 YM-GFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGN 246 (444)
T ss_dssp GT-HHHHHHTTGGGBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HH-hHHHHHHHHHHccCcccchhHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 75 777777777776543 4466665555555555544444444433
No 319
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=89.53 E-value=1.1 Score=53.97 Aligned_cols=87 Identities=11% Similarity=0.206 Sum_probs=59.6
Q ss_pred CCCceEEEEEEeCCeEEEecCCCcC------------CCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC--C--
Q psy8107 20 KRGWKGYWVCLKGTTLLFYPCDSRE------------GRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF--G-- 83 (1613)
Q Consensus 20 ~R~Wk~~~~vLkG~~L~fyKd~~~~------------~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d--g-- 83 (1613)
+.+|+.+|+.|=.+.|.+-|..... ..+....-++.|.+.+..+.... .-++.|.+.... |
T Consensus 307 ~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~---~~~~~f~l~~~~~~~~~ 383 (418)
T 3t06_A 307 KDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVA---TDKRAFFIICTSKLGPP 383 (418)
T ss_dssp TTBCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECS---SCSSEEEEEECCSSSTT
T ss_pred CCCeEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceecccc---ccCceEEEEecCCCCCc
Confidence 3458899999999888887754321 01112234568888887776432 234566665432 2
Q ss_pred CeEEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 84 DAYLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 84 ~~yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
..|.|||.+.+|.+.|+++|+.|++.
T Consensus 384 ~~~~l~A~s~~ek~~W~~~I~~a~~~ 409 (418)
T 3t06_A 384 QIYELVALTSSDKNTWMELLEEAVRN 409 (418)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 68999999999999999999999874
No 320
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=89.28 E-value=1.1 Score=60.73 Aligned_cols=83 Identities=12% Similarity=0.165 Sum_probs=66.5
Q ss_pred eEEEEEEeCCeEEEecCCCcCCC-----CCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCCCCeEEeecCCHHHHHH
Q psy8107 24 KGYWVCLKGTTLLFYPCDSREGR-----SVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAFGDAYLFQAPCQVELEN 98 (1613)
Q Consensus 24 k~~~~vLkG~~L~fyKd~~~~~~-----~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~dg~~yLFQA~~~~em~~ 98 (1613)
+.+|+.|=.+.|.+-|....... .....-+..|.+.+..+....|-.+-+|.|.+...++..|.|+|++.+|.+.
T Consensus 457 ~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~~~~~~~F~I~~~~~~~~~L~A~S~eeK~~ 536 (1049)
T 3ksy_A 457 HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNN 536 (1049)
T ss_dssp SCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCSSSCCSEEEECCTTSCCEEEECSSHHHHHH
T ss_pred ceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCCccccceEEEEcCCCCEEEEeCCCHHHHHH
Confidence 67889999998888886643211 1234566789999887777767667799999999998999999999999999
Q ss_pred HHHHHHHH
Q psy8107 99 WVNSIHSA 106 (1613)
Q Consensus 99 Wi~~I~~a 106 (1613)
|+.+|..+
T Consensus 537 Wi~~I~~~ 544 (1049)
T 3ksy_A 537 WMAALISL 544 (1049)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999865
No 321
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=88.78 E-value=3.4 Score=51.36 Aligned_cols=45 Identities=13% Similarity=0.044 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhhhcccccceeeeeehhhHHHHHHHHHHHHhcc
Q psy8107 1007 LCLLLAWIIVFFIVMKGIQSSGRVVYFTSMFPYIVLTIFFIRGIT 1051 (1613)
Q Consensus 1007 l~l~l~w~iv~~~v~kGI~~~gKv~~~~~l~P~vlL~iLlir~lt 1051 (1613)
+++++.|++.......|++...++..+.+.+-++++++++++.+.
T Consensus 144 v~~~i~~~l~~~~~~~G~~~i~~~~~~~~p~~~i~~i~~~~~~l~ 188 (501)
T 2jln_A 144 LWIVIFGAIQVVTTFYGITFIRWMNVFASPVLLAMGVYMVYLMLD 188 (501)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777777778888777665443333333444455555443
No 322
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=87.97 E-value=2.5 Score=49.96 Aligned_cols=86 Identities=12% Similarity=0.201 Sum_probs=58.3
Q ss_pred CCCceEEEEEEeCCeEEEecCCCcC-----------C-CCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC----C
Q psy8107 20 KRGWKGYWVCLKGTTLLFYPCDSRE-----------G-RSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF----G 83 (1613)
Q Consensus 20 ~R~Wk~~~~vLkG~~L~fyKd~~~~-----------~-~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d----g 83 (1613)
+++++.+|+.|=.+.|.+-|..... + .+....-++.|.+.+..+....+ -++.|.+-+.. .
T Consensus 265 ~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~---~~~~f~i~~~~~~g~~ 341 (368)
T 1xcg_A 265 KDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVAT---DKRAFFIICTSKLGPP 341 (368)
T ss_dssp SSCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECSS---CSSEEEEEECCSSSTT
T ss_pred CCCeeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEccceeeecccC---CCceEEEEEecCCCCc
Confidence 4568999999999888887754210 0 01112235688888876655432 24667654432 3
Q ss_pred CeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 84 DAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 84 ~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
..|.|+|++.+|.+.|+.+|+.|+.
T Consensus 342 ~~~~l~a~s~~ek~~W~~~i~~ai~ 366 (368)
T 1xcg_A 342 QIYELVALTSSDKNTWMELLEEAVR 366 (368)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 6899999999999999999999864
No 323
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=86.95 E-value=2.5 Score=45.58 Aligned_cols=88 Identities=14% Similarity=0.149 Sum_probs=57.4
Q ss_pred CCCceEEEEEEeCCeEEEecCCCc-CCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcC--CCCeEEeecCCHHHH
Q psy8107 20 KRGWKGYWVCLKGTTLLFYPCDSR-EGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTA--FGDAYLFQAPCQVEL 96 (1613)
Q Consensus 20 ~R~Wk~~~~vLkG~~L~fyKd~~~-~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~--dg~~yLFQA~~~~em 96 (1613)
+++|+..|++|=.+.|.+-+.... ..-.........|.|....+....+ .++..|.+++. ....|=|+|++.+|.
T Consensus 83 ~~~~~d~~~fLf~D~Ll~~~~~~~ky~~~~~~~~~pvi~L~~~~vre~a~--d~~~~fli~~~~~g~~~yel~a~s~~er 160 (185)
T 2lg1_A 83 AGRLKEVQAVLLTDILVFLQEKDQKYIFASLDQKSTVISLKKLIVREVAH--EEKGLFLISMGMTDPEMVEVHASSKEER 160 (185)
T ss_dssp TCCEEEEEEEEESSEEECCEEETTEEECCCCSSSCSEEESSSCEEECCSS--CSSEEEEECCSSSCCCCEEEECSSHHHH
T ss_pred CCCeeeEEEEeecCEEEEEEecCCEEEEEcccCCCCeEeecceEEeccCC--CCCeEEEEEecCCCCeEEEEEcCCHHHH
Confidence 346999999999887777643211 0000000112468888887765433 23345555543 245799999999999
Q ss_pred HHHHHHHHHHHHh
Q psy8107 97 ENWVNSIHSACAA 109 (1613)
Q Consensus 97 ~~Wi~~I~~aaa~ 109 (1613)
+.|+.+|..|+..
T Consensus 161 ~~W~~~I~~Ai~~ 173 (185)
T 2lg1_A 161 NSWIQIIQDTINT 173 (185)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999874
No 324
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=86.20 E-value=0.96 Score=51.62 Aligned_cols=55 Identities=11% Similarity=0.153 Sum_probs=45.1
Q ss_pred ceeEeCceEEeeCC-CCCCCCceEEEEcCCCCe-EEeecCCHHHHHHHHHHHHHHHH
Q psy8107 54 HLIIVDGAIMQPIP-EHPKRDYIFCLSTAFGDA-YLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 54 ~~I~l~~~~~~~a~-dy~KK~nVF~L~t~dg~~-yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
..+.+.-|...+.. .-.+|.|.|.+..+||.. ..++|+|.++++.|+++|+.+++
T Consensus 206 ~~ipL~m~~~tR~~~~~d~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i~ 262 (263)
T 1z87_A 206 KHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 262 (263)
T ss_dssp EEEESSSEEEEEECCSSCSSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cccCcceeeeeeeccccCCCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHhc
Confidence 46778888777662 122489999999999988 67899999999999999999875
No 325
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=85.92 E-value=2 Score=53.86 Aligned_cols=87 Identities=15% Similarity=0.174 Sum_probs=56.3
Q ss_pred CCceEEEEEEeCCeEEEecCCCcC---CC---------CCCCCCCceeEeCceEEeeCCCCCCCCceEEEEc--CCCCeE
Q psy8107 21 RGWKGYWVCLKGTTLLFYPCDSRE---GR---------SVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLST--AFGDAY 86 (1613)
Q Consensus 21 R~Wk~~~~vLkG~~L~fyKd~~~~---~~---------~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t--~dg~~y 86 (1613)
.+|+.+|+.|=.+.|.+.|..... .. +........|.+.+..+....+.. ...|-+.. .....|
T Consensus 425 ~k~~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e~~~d~--~~ffli~~~~~~~~~~ 502 (536)
T 3odw_A 425 DKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDH--KAFYVLFTWDQEAQIY 502 (536)
T ss_dssp ---CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEGGGEEEEECTTCT--TEEEEEEC---CCCEE
T ss_pred CCeeEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeecccceeecccccC--CceEEEecCCCCceEE
Confidence 458899999998888887743210 00 001112346888888776654332 23343443 357889
Q ss_pred EeecCCHHHHHHHHHHHHHHHHh
Q psy8107 87 LFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 87 LFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
.|+|.+.+|.+.|+..|+.|+..
T Consensus 503 ~L~A~S~eEK~~W~~~I~~aI~~ 525 (536)
T 3odw_A 503 ELVAQTVSERKNWCALITETAGS 525 (536)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHT
T ss_pred EEECCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999875
No 326
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=85.83 E-value=1.6 Score=52.23 Aligned_cols=87 Identities=13% Similarity=0.166 Sum_probs=58.9
Q ss_pred CCceEEEEEEeCCeEEEecCCCcC------------CCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC--CCeE
Q psy8107 21 RGWKGYWVCLKGTTLLFYPCDSRE------------GRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF--GDAY 86 (1613)
Q Consensus 21 R~Wk~~~~vLkG~~L~fyKd~~~~------------~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d--g~~y 86 (1613)
.+++.+|+.|=.+.|.+-|..... ..+....-++.|.+.+..+....+- .++.|.+...+ ...|
T Consensus 270 ~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~d--~~~~f~i~~~~~~~~~~ 347 (385)
T 1txd_A 270 DKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVATD--NKALFVISMSDNGAQIY 347 (385)
T ss_dssp SCBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGGEEEEECCC---CCEEEEEEECSSCEEEE
T ss_pred CCeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceecccccccccccC--CceEEEEEEcCCCceEE
Confidence 457888999998888886643210 0111123356788888766554322 24677766533 5689
Q ss_pred EeecCCHHHHHHHHHHHHHHHHh
Q psy8107 87 LFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 87 LFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
.|+|++.+|.+.|+.+|+.|+..
T Consensus 348 ~l~a~s~~ek~~W~~~i~~~i~~ 370 (385)
T 1txd_A 348 ELVAQTVSEKTVWQDLICRMAAS 370 (385)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999774
No 327
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=84.25 E-value=2.7 Score=49.92 Aligned_cols=88 Identities=16% Similarity=0.178 Sum_probs=58.8
Q ss_pred CCCceEEEEEEeCCeEEEecCCCcC---CC---------CCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcC--CCCe
Q psy8107 20 KRGWKGYWVCLKGTTLLFYPCDSRE---GR---------SVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTA--FGDA 85 (1613)
Q Consensus 20 ~R~Wk~~~~vLkG~~L~fyKd~~~~---~~---------~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~--dg~~ 85 (1613)
+.+|+..|+.|=.+.|.+.|..... .. +........|++.+.......+- ..+.|-+.+. ....
T Consensus 271 ~~~~~~~~~fLF~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~e~~~~--~~~~~~i~~~~~~~~~ 348 (377)
T 3p6a_A 271 KDKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD--HKAFYVLFTWDQEAQI 348 (377)
T ss_dssp SSCEEEEEEEEESSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGGEEEEECTTC--TTEEEEEETTCTTCCE
T ss_pred CCCeEEEEEEeeCCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechhhhccccccc--cceeEEEecCCCCCee
Confidence 3468899999999888887743210 00 00011123688887766654332 3456666653 4578
Q ss_pred EEeecCCHHHHHHHHHHHHHHHHh
Q psy8107 86 YLFQAPCQVELENWVNSIHSACAA 109 (1613)
Q Consensus 86 yLFQA~~~~em~~Wi~~I~~aaa~ 109 (1613)
|.|+|++.+|.+.|+..|+.|+..
T Consensus 349 ~~l~A~s~~ek~~W~~~I~~ai~~ 372 (377)
T 3p6a_A 349 YELVAQTVSERKNWCALITETAGS 372 (377)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999874
No 328
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=83.58 E-value=1.2 Score=49.54 Aligned_cols=53 Identities=17% Similarity=0.182 Sum_probs=41.6
Q ss_pred CCceeEeCceEEeeCCCCCCCCceEEEEcCCCCeEEeecCCHHHHHHHHHHHHH
Q psy8107 52 PKHLIIVDGAIMQPIPEHPKRDYIFCLSTAFGDAYLFQAPCQVELENWVNSIHS 105 (1613)
Q Consensus 52 p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~dg~~yLFQA~~~~em~~Wi~~I~~ 105 (1613)
..+.+++..-....+.+-+.+++.|.+.|++ +.|.|+|++++||+.||.+|+.
T Consensus 174 ~~g~~~~~~i~s~~~~~~~~~~~~f~iit~~-r~~~~~a~s~~e~~~Wi~~lq~ 226 (228)
T 3tfm_A 174 AVGTLDVGLIDSVCASDSPDRPNSFVIITAN-RVLHCNADTPEEMHHWITLLQR 226 (228)
T ss_dssp CSEEEEGGGEEEEEECCCSSCTTEEEEEETT-EEEEEECSSHHHHHHHHHHHCS
T ss_pred ccccCChhheeccccCCCCCCCCcEEEEeCC-ceEEEEcCCHHHHHHHHHHHhh
Confidence 3345666654555556666799999998885 7899999999999999999864
No 329
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=83.17 E-value=2.7 Score=49.73 Aligned_cols=87 Identities=16% Similarity=0.160 Sum_probs=60.9
Q ss_pred CCceEEEEEEeCCeEEEecCCCcCCCC----CCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC-CCeEEeecCCHHH
Q psy8107 21 RGWKGYWVCLKGTTLLFYPCDSREGRS----VDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF-GDAYLFQAPCQVE 95 (1613)
Q Consensus 21 R~Wk~~~~vLkG~~L~fyKd~~~~~~~----~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d-g~~yLFQA~~~~e 95 (1613)
.+++.+++.|=.+.|.+-|.....+.+ ....-+..|.+.+..+....+ ..++.|.+.... ...|.|+|+|++|
T Consensus 235 ~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~~~--~~~~~F~i~~~~~~~~~~l~a~s~~e 312 (353)
T 1kz7_A 235 FKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENVK--GDTKKFEIWYNAREEVYIIQAPTPEI 312 (353)
T ss_dssp SSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCBT--TBTTEEEEEETTTTEEEEEECSSHHH
T ss_pred cCcceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcccceeeEcCC--CCCceEEEEECCCCcEEEEECCCHHH
Confidence 357889999999988888765432211 112234567777665543322 236889998654 4679999999999
Q ss_pred HHHHHHHHHHHHHh
Q psy8107 96 LENWVNSIHSACAA 109 (1613)
Q Consensus 96 m~~Wi~~I~~aaa~ 109 (1613)
.+.|+.+|+.|+..
T Consensus 313 k~~W~~~i~~ai~~ 326 (353)
T 1kz7_A 313 KAAWVNAIRKVLTS 326 (353)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988763
No 330
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=82.03 E-value=2.5 Score=49.92 Aligned_cols=86 Identities=14% Similarity=0.077 Sum_probs=59.5
Q ss_pred CCceEEEEEEeCCeEEEecCCCcCC---CCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcC--C--CCeEEeecCCH
Q psy8107 21 RGWKGYWVCLKGTTLLFYPCDSREG---RSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTA--F--GDAYLFQAPCQ 93 (1613)
Q Consensus 21 R~Wk~~~~vLkG~~L~fyKd~~~~~---~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~--d--g~~yLFQA~~~ 93 (1613)
++++.+|+.|=.+.|.+-|...... ......-++.|.+.+..+....+ .-++.|.|... + ...|.|+|+|.
T Consensus 226 ~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~~--~~~~~F~i~~~~~~~~~~~~~l~a~s~ 303 (354)
T 2rgn_B 226 SRGRERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQ--GDPCRFALTSRGPEGGIQRYVLQAADP 303 (354)
T ss_dssp CCCCEEEEEEESSEEEEEEECC--------CCEEEEEEEEGGGEEEEESGG--GCTTEEEEEEECSSSCEEEEEEEESSH
T ss_pred CCCceEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeeccceeeeeccC--CCCceEEEEecCCCCCceEEEEECCCH
Confidence 4578899999999888877543211 11122334577887766554322 23688998763 2 36899999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy8107 94 VELENWVNSIHSACA 108 (1613)
Q Consensus 94 ~em~~Wi~~I~~aaa 108 (1613)
+|.+.|+.+|+.|..
T Consensus 304 ~ek~~W~~~i~~ai~ 318 (354)
T 2rgn_B 304 AISQAWIKHVAQILE 318 (354)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998865
No 331
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=81.22 E-value=8.7 Score=45.58 Aligned_cols=95 Identities=12% Similarity=0.115 Sum_probs=60.4
Q ss_pred ceEEEEEEeCCeEE-EecCCCcCCC-------------CCCCCCCceeEeCceEEeeCCCCCCCC-ceEEEEc-------
Q psy8107 23 WKGYWVCLKGTTLL-FYPCDSREGR-------------SVDAAPKHLIIVDGAIMQPIPEHPKRD-YIFCLST------- 80 (1613)
Q Consensus 23 Wk~~~~vLkG~~L~-fyKd~~~~~~-------------~~~~~p~~~I~l~~~~~~~a~dy~KK~-nVF~L~t------- 80 (1613)
-+.+++.|=.+.|. ..|+..+... .....-+..|++.+..+....|-.... ..|.+..
T Consensus 259 ~~~~~~fLF~d~lll~~k~~~~~k~~~~~~~~~s~~~~~~~y~~k~~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~~~~ 338 (377)
T 1foe_A 259 EPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEALQVRALPSADAEANAVCEIVHVKSESEG 338 (377)
T ss_dssp SCEEEEEEETTEEEEEECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGGEEEECCCCTTTTSCCEEEEEECCBTGGG
T ss_pred cceEEEEEcCCeEEEEeccccccccccccccccccccCCCceeEeeeccccceEEEecCCCccchhhHHHHHhccccccC
Confidence 46778888877544 5665322110 012234567899888777665443333 4576652
Q ss_pred CCCCeEEeecCCHHHHHHHHHHHHHHHHhhhhccCCc
Q psy8107 81 AFGDAYLFQAPCQVELENWVNSIHSACAAAFARHRGK 117 (1613)
Q Consensus 81 ~dg~~yLFQA~~~~em~~Wi~~I~~aaa~~~~r~~~~ 117 (1613)
.....|.++|++.+|.+.|+.+|+.++.....|++.+
T Consensus 339 ~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~~~~~~~~ 375 (377)
T 1foe_A 339 RPERVFHLCCSSPESRKDFLKSVHSILRDKHRRQLLK 375 (377)
T ss_dssp BCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CCcceEEEEeCCHHHHHHHHHHHHHHhhHHhhhhhhc
Confidence 1246799999999999999999999987655555544
No 332
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=80.65 E-value=0.33 Score=60.17 Aligned_cols=87 Identities=16% Similarity=0.136 Sum_probs=0.0
Q ss_pred CCceEEEEEEeCCeEEEecCCCcCCC--CC-----------CCCCCceeEeCceEEeeCCCCCCCCceEEEEcCCCCeEE
Q psy8107 21 RGWKGYWVCLKGTTLLFYPCDSREGR--SV-----------DAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAFGDAYL 87 (1613)
Q Consensus 21 R~Wk~~~~vLkG~~L~fyKd~~~~~~--~~-----------~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~dg~~yL 87 (1613)
++++.+|+.|=.+.|.+.|....... +. ...-+..|.+.+..+....|-...+|.|.+...+ ..|.
T Consensus 263 ~~~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~-~~~~ 341 (510)
T 3jzy_A 263 KSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPTDPSSDEPVFHISHID-RVYT 341 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhheEEeccCCCCccccceeeeccc-eeEE
Confidence 45788999999988888874433210 00 0112456888888777776666778999998876 4799
Q ss_pred eecCCHHHHHHHHHHHHHHHH
Q psy8107 88 FQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 88 FQA~~~~em~~Wi~~I~~aaa 108 (1613)
|||++.+|.+.|+++|+.|+.
T Consensus 342 l~a~s~~ek~~W~~~i~~ai~ 362 (510)
T 3jzy_A 342 LRTDNINERTAWVQKIKAASE 362 (510)
T ss_dssp ---------------------
T ss_pred eccCCHHHHHHHHHHHHHHHH
Confidence 999999999999999998755
No 333
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=80.27 E-value=2.6 Score=45.17 Aligned_cols=55 Identities=11% Similarity=0.153 Sum_probs=45.2
Q ss_pred ceeEeCceEEeeCC-CCCCCCceEEEEcCCCCe-EEeecCCHHHHHHHHHHHHHHHH
Q psy8107 54 HLIIVDGAIMQPIP-EHPKRDYIFCLSTAFGDA-YLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 54 ~~I~l~~~~~~~a~-dy~KK~nVF~L~t~dg~~-yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
..|.|.-|.+.+.. .-.|+.|.|.++.+||.. -+++++|..+.++|+++||.+++
T Consensus 121 ~~IPLkMayvtR~~~~tD~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni~ 177 (178)
T 2adz_A 121 KHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 177 (178)
T ss_dssp EEEETTTCEEEEECCSSCCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred eeecHHHHHHHHhccCCCCCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 45889988877762 222589999999999875 56899999999999999998864
No 334
>2daj_A KIAA0977 protein, COBL-like 1; ubiquitin-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.04 E-value=2.6 Score=39.47 Aligned_cols=49 Identities=18% Similarity=0.400 Sum_probs=41.5
Q ss_pred CCCCceEE--EEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccceeeee
Q psy8107 271 DEPDKSVK--VSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFVRVK 320 (1613)
Q Consensus 271 ~~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~~~~ 320 (1613)
.-||++++ |.+|-+|..-|-|-|..+.+|+|-.+|.+.++||.+ ++-+|
T Consensus 5 ~~PE~TvRLvVNy~~tQKtVvRVSP~vpL~ellp~IC~Kcefdp~~-~~Ll~ 55 (91)
T 2daj_A 5 SSGEKTVRVVINFKKTQKTIVRVSPHASLQELAPIICSKCEFDPLH-TLLLK 55 (91)
T ss_dssp SCCCSCEEEEEEETTTEEEEEEECSSSCTTTHHHHHHHHTTCCTTS-EEEES
T ss_pred CCCccEEEEEEeecCcceeEEEeCCCCcHHHHHHHHhhcccCChhh-EEEec
Confidence 34677775 889999999999999999999999999999999864 44333
No 335
>1wgr_A Growth factor receptor-bound protein 7; RA domain, GRB7, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=66.56 E-value=5.2 Score=38.95 Aligned_cols=41 Identities=17% Similarity=0.100 Sum_probs=36.4
Q ss_pred eEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccce
Q psy8107 276 SVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHF 316 (1613)
Q Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~ 316 (1613)
-++|.+.||-.-++.|-++|||.|++...|.+.+++...++
T Consensus 11 vvkvf~~Dgssksi~V~~~~Ta~dv~~~L~~K~~~~~~~~W 51 (100)
T 1wgr_A 11 VVKVYSEDGACRSVEVAAGATARHVCEMLVQRAHALSDETW 51 (100)
T ss_dssp EEEEEETTSCEEEEEECTTCCHHHHHHHHHCSSSCCCCCCC
T ss_pred EEEEEecCCCEEEEEECCCCcHHHHHHHHHHHcCCCCCCCe
Confidence 67999999999999999999999999999988888655544
No 336
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=63.77 E-value=3.2 Score=40.27 Aligned_cols=35 Identities=23% Similarity=0.349 Sum_probs=30.2
Q ss_pred hhhhHHHHHHHHHhhhhhcccchhhhhhhhhhccC
Q psy8107 158 KQQINEQITQWEENLERLHCEQFRLRCYMASLQNG 192 (1613)
Q Consensus 158 kk~~~~~i~~~~~k~e~l~~e~~Ry~~Y~~~L~~~ 192 (1613)
-+....+|.+...|++.|..|+++|.+|++-+.+.
T Consensus 57 ~~s~~~~L~e~~~kid~L~~el~K~q~~L~e~e~~ 91 (98)
T 2ke4_A 57 PASLEPQIAETLSNIERLKLEVQKYEAWLAEAESR 91 (98)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34448899999999999999999999999998653
No 337
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=63.09 E-value=19 Score=36.45 Aligned_cols=56 Identities=14% Similarity=0.256 Sum_probs=42.6
Q ss_pred EeecceEEEecCCcCCCCcceEEEEEeec-ccccCCccceEEeecCChHHHHHHHHHH
Q psy8107 1335 LVPVTEVQVRASSAKDMDSHFLWELIHLR-SQIQRRTEKVYVLSNSTAEFRNAFLKTI 1391 (1613)
Q Consensus 1335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1391 (1613)
+||+..++||.-....+...+..||+|.- ..+.. .-++|.||++|.|.+.+-++.|
T Consensus 56 ~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~r~v~~-~h~~y~LsA~t~ee~~~Wi~s~ 112 (125)
T 1dyn_A 56 MLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYK-DYRQLELACETQEEVDSWKASF 112 (125)
T ss_dssp EEECTTEEEEECCSCSSSSCEEEEEEETTSSCSST-TCSSEEEEESSHHHHHHHHHHH
T ss_pred EEECCCceEeccCCCCCCCceEEEEECCCCccccc-cceEEEEeCCCHHHHHHHHHHH
Confidence 49999999998665445677899999952 12222 3479999999999999887766
No 338
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=62.32 E-value=21 Score=45.96 Aligned_cols=80 Identities=18% Similarity=0.273 Sum_probs=57.8
Q ss_pred CCCceEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCCCCeEEeecCCHHHHHHH
Q psy8107 20 KRGWKGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAFGDAYLFQAPCQVELENW 99 (1613)
Q Consensus 20 ~R~Wk~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~dg~~yLFQA~~~~em~~W 99 (1613)
.+.|++.++.|....+-++-+. ..+.+.+.+.... ......-+..+.|++.+.++..|.++++|..+++.|
T Consensus 573 ~~~~~rR~~~l~p~r~e~~~e~--------~~~~~l~~~~~v~-~v~k~~i~~~~~l~~~~k~~k~f~~~t~~~~~~~~W 643 (689)
T 3v5w_A 573 LTQWQRRYFYLFPNRLEWRGEG--------EAPQSLLTMEEIQ-SVEETQIKERKCLLLKIRGGKQFILQCDSDPELVQW 643 (689)
T ss_dssp ---CEEEEEEEETTEEEEECTT--------SCCCEEEEGGGEE-EEEEEESSSCEEEEEEETTTEEEEEECSSHHHHHHH
T ss_pred cchhhhhccccCCCcccccccC--------CCCcceeeecccc-ccccCcCCCCcceeeeecCCcEEEEECCChHHHHHH
Confidence 3579999999998888776432 2233344444332 222234477899999999999999999999999999
Q ss_pred HHHHHHHHH
Q psy8107 100 VNSIHSACA 108 (1613)
Q Consensus 100 i~~I~~aaa 108 (1613)
.+.|..+-.
T Consensus 644 ~~~i~~~~~ 652 (689)
T 3v5w_A 644 KKELRDAYR 652 (689)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987654
No 339
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=58.78 E-value=10 Score=43.79 Aligned_cols=48 Identities=19% Similarity=0.294 Sum_probs=42.3
Q ss_pred CceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccce-eeeee
Q psy8107 274 DKSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHF-VRVKK 321 (1613)
Q Consensus 274 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~-~~~~~ 321 (1613)
...++|.||||+...+.|.+..|+.|++...|..-+|-..++| |.+..
T Consensus 17 ~~~~~V~lldgt~~~~~vd~~tt~~el~~~v~~~l~L~e~~~FgL~~~~ 65 (296)
T 3qij_A 17 QGHCKVSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAIWD 65 (296)
T ss_dssp CCEEEEECTTSCEEEEECCTTCBHHHHHHHHHHHHTCSSGGGEEEEEEE
T ss_pred eEEEEEEccCCCEEEEEECCCCCHHHHHHHHHHHcCCCCcceeEEEEEc
Confidence 4578999999999999999999999999999999999766666 76654
No 340
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=55.21 E-value=66 Score=32.28 Aligned_cols=94 Identities=13% Similarity=0.222 Sum_probs=56.8
Q ss_pred cceEEecccccccccCCCc-eEEEEEEeCC-eEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCC----------CCC
Q psy8107 5 KKWLLRKKHQIELARKRGW-KGYWVCLKGT-TLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEH----------PKR 72 (1613)
Q Consensus 5 Kg~L~~K~~k~~~~~~R~W-k~~~~vLkG~-~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy----------~KK 72 (1613)
+|-.+.|-. +++| |..+++|..+ ..++|+... ......+..|+|.+-........ ...
T Consensus 15 ~Gt~l~K~~------~~~~~k~r~f~l~~~~~~~w~~s~~----~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~ 84 (131)
T 1mai_A 15 KGSQLLKVK------SSSWRRERFYKLQEDCKTIWQESRK----VMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPE 84 (131)
T ss_dssp HCEEEEEES------SSSCEEEEEEEECTTSSEEEECCCC----TTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCG
T ss_pred cCCeEEEEC------CCCcceeEEEEECCCCCEEEeCCcC----CCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCc
Confidence 455555532 2334 4566677754 444554211 11123456777775544444321 125
Q ss_pred CceEEEEcCCC-CeEEeecCCHHHHHHHHHHHHHHHH
Q psy8107 73 DYIFCLSTAFG-DAYLFQAPCQVELENWVNSIHSACA 108 (1613)
Q Consensus 73 ~nVF~L~t~dg-~~yLFQA~~~~em~~Wi~~I~~aaa 108 (1613)
..-|.+-..+. ..--|.|+|.+|.+.|++.|+...+
T Consensus 85 ~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~ 121 (131)
T 1mai_A 85 DRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIH 121 (131)
T ss_dssp GGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHHH
Confidence 67898877764 5778999999999999999997654
No 341
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=54.37 E-value=9.7 Score=45.43 Aligned_cols=48 Identities=8% Similarity=0.131 Sum_probs=40.6
Q ss_pred ceEEEEcCCCC----eEEEEecCCCcHHHHHHhHccccccCCccce-eeeeee
Q psy8107 275 KSVKVSLPENQ----YAHVYLKDSMTVEEFLANACSRKNLNPMEHF-VRVKKR 322 (1613)
Q Consensus 275 ~~~~v~~~~~~----~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~-~~~~~~ 322 (1613)
..++|+||||+ ...+.+.+..||+|++..+|+.-+|.-.++| |++...
T Consensus 8 ~~l~V~l~~g~~~~~~~~~~~~~~tt~~dl~~~v~~~lgL~~~~~FgL~~~~~ 60 (375)
T 2al6_A 8 KVFHYFENSSEPTTWASIIRHGDATDVRGIIQKIVDCHKVKNVACYGLRLSHL 60 (375)
T ss_dssp EEECCCCCSSCGGGCEEEEEECTTCBHHHHHHHHHHHTTCSCGGGEEEEEEET
T ss_pred ceEEEEecCCCCCCceEEEEeCCCCCHHHHHHHHHHHcCCCeEeEEEEEEEEc
Confidence 35578999999 9999999999999999999999999655566 776554
No 342
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=53.60 E-value=11 Score=48.35 Aligned_cols=48 Identities=6% Similarity=0.119 Sum_probs=40.7
Q ss_pred eEEEEcCCCC----eEEEEecCCCcHHHHHHhHccccccCCccce-eeeeeec
Q psy8107 276 SVKVSLPENQ----YAHVYLKDSMTVEEFLANACSRKNLNPMEHF-VRVKKRR 323 (1613)
Q Consensus 276 ~~~v~~~~~~----~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~-~~~~~~~ 323 (1613)
..+|.+||++ .-.|.+-++.|++|++...|+..+|--.+|| ||+.-..
T Consensus 9 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~i~~~v~~~l~i~~~~~fgL~~~~~~ 61 (656)
T 2j0j_A 9 VFHYFENSSEPTTWASIIRHGDATDVRGIIQKIVDCHKVKNVACYGLRLSHLQ 61 (656)
T ss_dssp EECCCCCSSCGGGCEEEEEECTTCBHHHHHHHHHHHTTCSCGGGEEEEEEESS
T ss_pred heEEeccCCCCCCceeEEEeCCCCcHHHHHHHHHHhcCcceeeeEEEEEeecc
Confidence 4457799999 8899999999999999999999998555677 8887653
No 343
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=51.08 E-value=41 Score=33.18 Aligned_cols=62 Identities=15% Similarity=0.299 Sum_probs=46.1
Q ss_pred EEEEEEeecceEEEecCCcCCCCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHHHhhh
Q psy8107 1330 IRYQVLVPVTEVQVRASSAKDMDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIRESVR 1400 (1613)
Q Consensus 1330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1400 (1613)
++|++.+|+.+++|..-...+ ...-.|.+.+ +++.|.+++++++.|...+.+|++.+++...
T Consensus 50 ~~~~~~~~L~~~~v~d~~d~~-~~~n~f~i~~--------~~~s~~~~aes~~eK~~Wl~~~~~a~~~~~~ 111 (113)
T 1zc3_B 50 YRYNALYPLDRLAVVNVKDNP-PMKDMFKLLM--------FPESRIFQAENAKIKREWLEVLEETKRALSD 111 (113)
T ss_dssp EEEEEEEETTTCEEEEECCBT-TBSSEEEEEE--------TTEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEcccCEEEECCCCc-ccceEEEEEe--------CCceEEEEcCCHHHHHHHHHHHHHHHHHHhh
Confidence 899999999999987543222 1233444443 3346899999999999999999999988654
No 344
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=50.34 E-value=34 Score=33.67 Aligned_cols=52 Identities=23% Similarity=0.524 Sum_probs=40.7
Q ss_pred eecceEEEecCC-cCCCCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHH
Q psy8107 1336 VPVTEVQVRASS-AKDMDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQII 1395 (1613)
Q Consensus 1336 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1395 (1613)
||+...+|.... ..+.+-.+.++|+| ++++|.++..+.|..+..+++|+...
T Consensus 53 I~L~g~~V~~~~~~~~~~~~~~Fki~~--------~~~~y~f~A~s~e~~~~Wl~al~~A~ 105 (112)
T 2coc_A 53 IPLPSCKLSVPDPEERLDSGHVWKLQW--------AKQSWYLSASSAELQQQWLETLSTAA 105 (112)
T ss_dssp ECGGGCEEECCCSSSCCSSSEEEEEEE--------TTEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEcCCCEEEecCcccccCCCCEEEEec--------CCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 888888887532 23445568899986 35689999999999999999998754
No 345
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=49.18 E-value=24 Score=37.18 Aligned_cols=35 Identities=17% Similarity=0.439 Sum_probs=30.2
Q ss_pred eEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHHH
Q psy8107 1355 FLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIRE 1397 (1613)
Q Consensus 1355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1397 (1613)
+..+++| ++++|.|+..+.+.|++.+++|++.|+.
T Consensus 99 ~~F~I~t--------~~rt~yl~A~s~~E~~eWi~aI~~~i~~ 133 (169)
T 1btk_A 99 YPFQVVY--------DEGPLYVFSPTEELRKRWIHQLKNVIRY 133 (169)
T ss_dssp EEEEEEE--------TTCCEEEEESCHHHHHHHHHHHHHHHTT
T ss_pred ccEEEEe--------CCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 6778887 4468999999999999999999999873
No 346
>2jxx_A Nfatc2-interacting protein; nuclear factor of activated T-cells, cytoplasmic 2- interacting protein, ubiquitin like homologue; NMR {Homo sapiens}
Probab=48.73 E-value=17 Score=35.15 Aligned_cols=48 Identities=13% Similarity=0.055 Sum_probs=39.3
Q ss_pred ceEEEEcCCC-CeEEEEecCCCcHHHHHHhHccccccCCccceeeeeeecccc
Q psy8107 275 KSVKVSLPEN-QYAHVYLKDSMTVEEFLANACSRKNLNPMEHFVRVKKRREME 326 (1613)
Q Consensus 275 ~~~~v~~~~~-~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~~~~~~~~~~ 326 (1613)
..++|.-+|| +.+.+.|++..+..-+..+.|+++++++.. + ++.-|++
T Consensus 26 I~LkV~~~dg~~~v~fkIk~~t~l~kLm~aY~~~~g~~~~~--v--rF~FDG~ 74 (97)
T 2jxx_A 26 LQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGRK--L--SFFFDGT 74 (97)
T ss_dssp EEEEEEESSSSCEEEEEEETTSCHHHHHHHHHHHTTCSSSC--C--EEEETTE
T ss_pred EEEEEEcCCCCEEEEEEECCCChHHHHHHHHHHHHCCCccc--E--EEEECCE
Confidence 4668888999 589999999999999999999999999863 4 4444544
No 347
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=48.57 E-value=13 Score=43.98 Aligned_cols=46 Identities=17% Similarity=0.437 Sum_probs=40.1
Q ss_pred CceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccce-eee
Q psy8107 274 DKSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHF-VRV 319 (1613)
Q Consensus 274 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~-~~~ 319 (1613)
...++|.||||+...+.|.+..|+.|++...|+.-+|...++| |..
T Consensus 85 ~~~~~V~l~dg~~~~~~vd~~tt~~el~~~v~~~l~L~e~~~FgL~~ 131 (371)
T 3ivf_A 85 QRPLKIRMLDGTVKTIMVDDSKTVTDMLMTICARIGITNHDEYSLVR 131 (371)
T ss_dssp EEEEEEECTTSCEEEEEEETTSBHHHHHHHHHHHTTCSCGGGEEEEC
T ss_pred eeEEEEECcCCCEEEEEECCCCCHHHHHHHHHHHcCCCCccccEEEE
Confidence 4577999999999999999999999999999999999765555 544
No 348
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=48.22 E-value=39 Score=32.18 Aligned_cols=62 Identities=16% Similarity=0.293 Sum_probs=43.2
Q ss_pred eecceEEEecCC-cCCCCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHHH
Q psy8107 1336 VPVTEVQVRASS-AKDMDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIRE 1397 (1613)
Q Consensus 1336 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1397 (1613)
|++....|.... .......+..+|++........++++|.|++.+.+.+++.+++|++.+..
T Consensus 51 i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 113 (118)
T 1v89_A 51 MYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGS 113 (118)
T ss_dssp ECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHC
T ss_pred EECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHcc
Confidence 666666665332 22334467788887432222247789999999999999999999998863
No 349
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=47.53 E-value=14 Score=46.25 Aligned_cols=73 Identities=15% Similarity=0.212 Sum_probs=43.8
Q ss_pred CCCchhhHHHhhhccceeeecccceEEEEEEecCCCCccceEEE-EeecccccccCcceeEEEEecCCChhhhcCCCCCC
Q psy8107 332 VPPRGDLIETYLSTHEVVEVCAKILYQVELQRTTLDHMWGFSVE-AELTENAERQDELCCYVSRVEDKSVAMHNGLIKGD 410 (1613)
Q Consensus 332 ~p~~~~~~~~~~~~~~~iEv~~~~~~~v~l~k~~~~~~~GF~v~-~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GD 410 (1613)
.+...|+...+. +-+--..+..-.+.+.... ...+||.++ . .+ | ++||.++.... +++.+||
T Consensus 52 ~~Te~dFq~~L~---~~fasl~DGHt~l~~~s~~-~a~~Pf~vki~--iD--G-----~i~V~dv~~~~----s~I~vGd 114 (583)
T 3dor_A 52 NPSTSFCQQVLA---DFIGGLNDFHAGVTFFAIE-SAYLPYTVQKS--SD--G-----RFYFVDIMTFS----SEIRVGD 114 (583)
T ss_dssp SCCHHHHHHHHH---HHHHTTCCSSCEEEESCCC-EEECSEEEEEC--TT--S-----CEEEEEECSSC----CSSCTTC
T ss_pred CCCHHHHHHHHH---HHHhhcCCCceeEeecccc-cccCCeEEEEE--EC--C-----cEEEEeccccc----cCCCCCC
Confidence 355555554442 2222334556666654332 246788777 4 22 1 27888774333 2899999
Q ss_pred EEEEEcCeecC
Q psy8107 411 EIMVINGAIVS 421 (1613)
Q Consensus 411 eIl~vNg~~v~ 421 (1613)
||+.|||+++.
T Consensus 115 EIlsING~pv~ 125 (583)
T 3dor_A 115 ELLEVDGAPVQ 125 (583)
T ss_dssp EEEEETTEEHH
T ss_pred EEEEECCccHH
Confidence 99999999853
No 350
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=47.47 E-value=14 Score=42.09 Aligned_cols=45 Identities=13% Similarity=0.203 Sum_probs=39.0
Q ss_pred eEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccce-eeeee
Q psy8107 276 SVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHF-VRVKK 321 (1613)
Q Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~-~~~~~ 321 (1613)
.++|.|+|| .+.+.+.+..|+.|++...|+.-+|....+| |.+..
T Consensus 3 ~~~V~l~d~-~~~~~v~~~tt~~el~~~v~~~l~L~e~~~FgL~~~~ 48 (294)
T 1ef1_A 3 SVRVTTMDA-ELEFAIQPNTTGKQLFDQVVKTIGLREVWFFGLQYQD 48 (294)
T ss_dssp EEEEEETTE-EEEEEECTTCBHHHHHHHHHHHHTCCCGGGEEEEEEB
T ss_pred EEEEEECCc-eEEEEECCCCcHHHHHHHHHHHcCCCCcceeEEEEEC
Confidence 578999999 6789999999999999999999999766666 76654
No 351
>2kc2_A Talin-1, F1; FERM, adhesion, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane, phosphoprotein, structural protein; NMR {Mus musculus}
Probab=46.08 E-value=17 Score=37.02 Aligned_cols=42 Identities=19% Similarity=0.489 Sum_probs=36.7
Q ss_pred ceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccce
Q psy8107 275 KSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHF 316 (1613)
Q Consensus 275 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~ 316 (1613)
+..+|-||||+..++.|.+.+||.++...+|++-++-+.+-|
T Consensus 12 r~LkV~llDg~~ktl~VD~S~~V~~lv~~Ic~kigI~n~~ey 53 (128)
T 2kc2_A 12 RPLKIRMLDGTVKTIMVDDSKTVTDMLMTICARIGITNHDEY 53 (128)
T ss_dssp EEEEEECTTSCEEEEEEEECSSHHHHHHHHHHHHTCCCCSSE
T ss_pred ccEEEEcCCCCEEEEEeCCCcCHHHHHHHHHHHhCCCCcccc
Confidence 467999999999999999999999999999999988544334
No 352
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=45.82 E-value=17 Score=43.77 Aligned_cols=72 Identities=15% Similarity=0.160 Sum_probs=50.9
Q ss_pred CCceEEEEc------CCCCeEEEEecCCCcHHHHHHhHc--cccccCC--ccce-eeeeeecccccccccCCCchhhHHH
Q psy8107 273 PDKSVKVSL------PENQYAHVYLKDSMTVEEFLANAC--SRKNLNP--MEHF-VRVKKRREMEDHNYFVPPRGDLIET 341 (1613)
Q Consensus 273 ~~~~~~v~~------~~~~~~~~~~~~~~~~~~~l~~~c--~~~~l~~--~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~ 341 (1613)
..+..+||+ |||+.-+|.+-+..||.||+.++| .+-++++ .+|| |++.....+ +..--++++-|.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~k~v~~d~~ttV~dVi~~i~~~~kiG~~i~~~~~FgL~~~~~~~~---~~~wL~~~~~l~~ 96 (392)
T 4eku_A 20 DVRILKVCFYSNSFNPGKNFKLVKCTVQTEIREIITSILLSGRIGPNIRLAECYGLRLKHMKSD---EIHWLHPQMTVGE 96 (392)
T ss_dssp GEEEEEEEECCSSSCGGGEEEEEEEETTCBHHHHHHHHHHTTTTCSSCCCGGGEEEEEEESSSC---CEEEECTTSBHHH
T ss_pred eeeeEEEEecccccCCCCCeEEEEeCCCCcHHHHHHHHHHHhhcCCCcCccceEEEEEEECCCC---ceEECCCCCcHHH
Confidence 356779999 999999999999999999999999 5555543 3455 887653322 2334456666777
Q ss_pred hhhccc
Q psy8107 342 YLSTHE 347 (1613)
Q Consensus 342 ~~~~~~ 347 (1613)
++..|+
T Consensus 97 v~~k~~ 102 (392)
T 4eku_A 97 VQDKYE 102 (392)
T ss_dssp HHHHST
T ss_pred HHhhhh
Confidence 764443
No 353
>3pge_A SUMO-modified proliferating cell nuclear antigen; DNA replication, DNA binding protein; 2.80A {Saccharomyces cerevisiae}
Probab=45.78 E-value=92 Score=33.93 Aligned_cols=137 Identities=10% Similarity=0.083 Sum_probs=84.2
Q ss_pred ceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccceeeeeeeccccccc-ccCCCchhhHHHhhhccceeeecc
Q psy8107 275 KSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFVRVKKRREMEDHN-YFVPPRGDLIETYLSTHEVVEVCA 353 (1613)
Q Consensus 275 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~iEv~~ 353 (1613)
..++|.. +|..+..-|++.++...+..+.|.+.++++.. +|+.+ +++..+ .-.|..-+ |+ ..|.|+++.
T Consensus 30 I~LkV~~-~g~~v~fkIk~~t~l~kL~~ay~er~Gi~~~~--~RF~F--dG~rI~~~~TP~dL~-ME----dgD~Idv~~ 99 (200)
T 3pge_A 30 INLKVSD-GSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDS--LRFLY--DGIRIQADQTPEDLD-ME----DNDIIEAHR 99 (200)
T ss_dssp EEEEEEC-SSCEEEEEECTTSCTHHHHHHHHHHHSSCGGG--EEEEE--TTEECCTTCCTTTTT-CC----TTEEEEEEE
T ss_pred EEEEEec-CCCEEEEEEecCCHHHHHHHHHHHHhCCChhh--EEEEE--CCEEcCCCCCHHHcC-CC----CCCEEEEEe
Confidence 4678885 99999999999999999999999999998643 44444 433232 23555433 22 246677743
Q ss_pred cceEEEEEEecCCCCccceEEEEeecccccccCcceeEEEEecCCChhhhcCCCCC-CEEEEEcCeecCCCCHHHHHHHH
Q psy8107 354 KILYQVELQRTTLDHMWGFSVEAELTENAERQDELCCYVSRVEDKSVAMHNGLIKG-DEIMVINGAIVSDLDMMYLESVL 432 (1613)
Q Consensus 354 ~~~~~v~l~k~~~~~~~GF~v~~~~~~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~G-DeIl~vNg~~v~~l~~~~~~~ll 432 (1613)
.. ..+..+++=|+..|+++. ..|. +.+...+. ++. ..-+++++-.-...++.++..+.
T Consensus 100 ~q-------~gg~kd~v~Fs~~GD~G~---------~~i~-l~~~~~~d----k~e~~v~ie~~e~v~~~fsl~YL~~f~ 158 (200)
T 3pge_A 100 EQ-------IGGGGETIKFVADGDIGS---------GSVI-IKPFVDME----HPETSIKLEMDQPVDLTFGAKYLLDII 158 (200)
T ss_dssp CC-------SCCC-CCEEEEEECSSCE---------EEEE-ECCBCCSS----SCTTCBEEEESSCEEEEEEHHHHHHHG
T ss_pred cc-------CcCcCceEEEEeeccCCe---------EEEE-EecCCCCC----CcccceEEEeCCcceeeEhHHHHHHHh
Confidence 21 122224444444442221 2333 44443332 222 34588898888889999999987
Q ss_pred hcC---CeEEEEE
Q psy8107 433 QEE---LSLCMMM 442 (1613)
Q Consensus 433 ~~~---~~l~L~v 442 (1613)
+.. ..++|.+
T Consensus 159 Ka~~ls~~V~l~l 171 (200)
T 3pge_A 159 KGSSLSDRVGIRL 171 (200)
T ss_dssp GGGGGCSEEEEEE
T ss_pred ccccCCCeEEEEE
Confidence 532 6666665
No 354
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=45.63 E-value=25 Score=35.80 Aligned_cols=60 Identities=13% Similarity=0.245 Sum_probs=46.7
Q ss_pred eEEEEEEeecceEEEecCCcCCCCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHH
Q psy8107 1329 IIRYQVLVPVTEVQVRASSAKDMDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIR 1396 (1613)
Q Consensus 1329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1396 (1613)
-|+|+--+|+..+.|+....++ +...-+|+. ++..+.++++|+++|-++..+..++..+.
T Consensus 67 ~f~~kgklPL~g~~V~~~ed~~-~~~~aFeI~-------g~~~~~i~v~~~s~eE~~~Wl~~L~~~i~ 126 (132)
T 1v61_A 67 GFMYQGKIPIAGMVVNRLDEIE-GSDCMFEIT-------GSTVERIVVHCNNNQDFQEWMEQLNRLTK 126 (132)
T ss_dssp CCEEEEEECTTTCBCSTTCSSS-SSCCCEEEE-------CSSSCEEEECCCCSHHHHHHHHHHHHHHT
T ss_pred eEEEEEEEecceeEEEeccccc-cCccEEEEe-------cCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 4999999999999999764332 233445654 56667789999999999999999988764
No 355
>2io0_B Small ubiquitin-related modifier 2 precursor; SUMO, SENP, ULP, complex, protein binding, hydrolase; 2.30A {Homo sapiens} SCOP: d.15.1.1
Probab=45.56 E-value=29 Score=33.01 Aligned_cols=45 Identities=16% Similarity=0.323 Sum_probs=38.6
Q ss_pred ceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccceeeeee
Q psy8107 275 KSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFVRVKK 321 (1613)
Q Consensus 275 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~~~~~ 321 (1613)
-.++|--++|..+.+.|++.+++..+..+.|++.+++|.. +|+.+
T Consensus 6 i~ikVk~~~g~~v~~~vk~~t~l~kl~~~y~~~~gi~~~~--~rf~F 50 (91)
T 2io0_B 6 INLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQ--IRFRF 50 (91)
T ss_dssp EEEEEECTTSCEEEEEEETTSCTHHHHHHHHHHTTCCSTT--EEEEE
T ss_pred EEEEEECCCCCEEEEEECCCChHHHHHHHHHHHhCCCccc--EEEEE
Confidence 4678888999999999999999999999999999999853 44444
No 356
>4ain_A Glycine betaine transporter BETP; membrane protein, chemosensor and osmosensor, secondary TRAN sodium coupled transport; HET: FLC CM5; 3.10A {Corynebacterium glutamicum} PDB: 4doj_A* 2w8a_A 2wit_A 3p03_A
Probab=44.83 E-value=19 Score=44.84 Aligned_cols=183 Identities=16% Similarity=0.173 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHhhhcccccceeeeeehhhHHHHHHHHHHHHhc---cCCChhccceeeec--cccc----cccC--h
Q psy8107 1005 IVLCLLLAWIIVFFIVMKGIQSSGRVVYFTSMFPYIVLTIFFIRGI---TLPGAGAGLVHMYT--PKVE----KLLD--P 1073 (1613)
Q Consensus 1005 l~l~l~l~w~iv~~~v~kGI~~~gKv~~~~~l~P~vlL~iLlir~l---tL~Ga~~Gl~~lf~--Pd~s----~L~~--~ 1073 (1613)
+++..++.-+-++.++-||||....+...++..-+ +.+++.+= .++...+++-.|+. +..+ ...+ .
T Consensus 243 i~vit~i~~~Sa~sGl~kGIk~LS~~N~~La~~Ll---~fvli~GPT~fil~~~~~s~G~yl~nf~~ms~~t~~~~~~~~ 319 (539)
T 4ain_A 243 VSVLTLAFIFSAISGVGKGIQYLSNANMVLAALLA---IFVFVVGPTVSILNLLPGSIGNYLSNFFQMAGRTAMSADGTA 319 (539)
T ss_dssp HHHHHHHHHHHHHC---CCHHHHGGGHCCCCCHHH---HHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHCCSSTTTTCC
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH---HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhCcCCcccCccc
Confidence 33444455566788999999988765433332221 11111111 12222222222221 1111 0001 1
Q ss_pred hHHHHHHhhHHHhhcccccceeh-hccccCCCCccccceehhhhhHHHHHHHHHHHHHhhhccccccccccCCCceeccc
Q psy8107 1074 NVWLDAATQVFYSFGLAFGSLIA-FGSYNQPNNNCVRDVIMVSICNALTAIYASVVVFAILGFKAMSNAAEGTGLAFIAA 1152 (1613)
Q Consensus 1074 ~vW~~A~~QaFfSLslG~G~mit-ygSY~~~~~ni~rda~~v~~~n~~vSllAgl~IFsilG~~a~~~~~~~~~i~~~~~ 1152 (1613)
..|...=+--++..-++++.++- |=+..+++. .+|. .++...++-.+.+++.|+++|-.+......+.++ ...
T Consensus 320 ~~W~~~WTiFYWaWWiswaPfvG~FIARISrGR-TIRE---fv~gvl~vPsl~~~~WfsvfGg~ai~~~~~g~~~--~~~ 393 (539)
T 4ain_A 320 GEWLGSWTIFYWAWWISWSPFVGMFLARISRGR-SIRE---FILGVLLVPAGVSTVWFSIFGGTAIVFEQNGESI--WGD 393 (539)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHTTTTC-BHHH---HHHTTTHHHHHHHHHHHHHHHHHHHHHHHTTCCC--CTT
T ss_pred cchhhcCHHHHHHHHHHHHHHHHHHhhhccCCc-CHHH---HHHHHHHHHHHHHHHHHHHhCHHHHHHHHhccch--hhc
Confidence 34655555444444444433321 112222222 2332 3333444555566677777766554321122221 111
Q ss_pred CCCceehHHHHHHHHhCCChhHHHHHHHHHHHHHhhhhcchhhhhhh
Q psy8107 1153 EGTGLAFIVFTQAIVELPGAPFWSIIFFMMLLSLGLGSQIGILEGVL 1199 (1613)
Q Consensus 1153 ~G~gL~Fi~lP~af~~mp~g~l~avLFFl~L~lagltS~isllE~iV 1199 (1613)
.++ -.++-..+.++|++.+.++++.+++++.=+||+=|..-++-
T Consensus 394 ~~~---~~alf~~l~~lP~~~i~~~l~iili~~FfvTSaDS~s~vl~ 437 (539)
T 4ain_A 394 GAA---EEQLFGLLHALPGGQIMGIIAMILLGTFFITSADSASTVMG 437 (539)
T ss_dssp SCH---HHHHHHHHHTSTTHHHHHHHHHHHHHHHHHTTTHHHHHHHH
T ss_pred CCH---hhHHHHHHHHCchHHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 222 24666889999999999999988888877777666554443
No 357
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=43.73 E-value=28 Score=35.23 Aligned_cols=58 Identities=10% Similarity=0.177 Sum_probs=38.9
Q ss_pred eecceEEEecCCcCCCCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHHHhhhcc
Q psy8107 1336 VPVTEVQVRASSAKDMDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIRESVRNM 1402 (1613)
Q Consensus 1336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1402 (1613)
|++....+...+. ....+..+|++. ..++|.|+..+.+.++..+++|+++|..+...+
T Consensus 73 I~L~~~~~~~~~~--~~~~~~F~i~~~-------~~r~~~l~A~s~~e~~~Wi~al~~ai~~~~~~~ 130 (150)
T 1wg7_A 73 IFLDSCMGVVQNN--KVRRFAFELKMQ-------DKSSYLLAADSEVEMEEWITILNKILQLNFEAA 130 (150)
T ss_dssp ECTTTCCEECCCC--SSCTTEEEEECS-------SSCEEEEECSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecccCEEEecCC--CCCceEEEEEeC-------CCcEEEEEeCCHHHHHHHHHHHHHHHHhhhHHH
Confidence 4544444433221 234456677652 137999999999999999999999998665443
No 358
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.16 E-value=43 Score=32.55 Aligned_cols=57 Identities=9% Similarity=0.218 Sum_probs=39.5
Q ss_pred eecceEEEecCCcCCCCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHHHhhhccC
Q psy8107 1336 VPVTEVQVRASSAKDMDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIRESVRNMS 1403 (1613)
Q Consensus 1336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1403 (1613)
|++....|.... +..+..+|++ ...++|.|+..+.|.+++.+++|++.++.....+.
T Consensus 55 I~L~~~~v~~~~----~~~~~F~i~~-------~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~~~ 111 (120)
T 2d9x_A 55 LQLAGAVISPSD----EDSHTFTVNA-------ASGEQYKLRATDAKERQHWVSRLQICTQHHTEAIG 111 (120)
T ss_dssp EECTTCCEECCS----SSSSCEEECC-------SSSCCEEECCSSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEcceEEEEecC----CCCCEEEEEc-------CCCCEEEEECCCHHHHHHHHHHHHHHHHHhhhhhc
Confidence 555544444321 2235556654 12478999999999999999999999987766554
No 359
>2io1_B Small ubiquitin-related modifier 3 precursor; SUMO, SENP, ULP, complex, protein binding, hydrolase; 2.60A {Homo sapiens} SCOP: d.15.1.1
Probab=41.03 E-value=32 Score=32.80 Aligned_cols=46 Identities=15% Similarity=0.288 Sum_probs=39.1
Q ss_pred CceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccceeeeee
Q psy8107 274 DKSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFVRVKK 321 (1613)
Q Consensus 274 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~~~~~ 321 (1613)
.-.++|--++|..+.+.|++.++++.+..+.|++.+++|. -+|+.+
T Consensus 7 ~i~ikVk~~~g~~i~~~v~~~t~l~kl~~~y~~~~gi~~~--~~rf~F 52 (94)
T 2io1_B 7 HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMR--QIRFRF 52 (94)
T ss_dssp EEEEEEECTTSCEEEEEEETTSCTHHHHHHHHHHHTCCGG--GEEEEE
T ss_pred eEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHhCCCcc--cEEEEE
Confidence 3467888899999999999999999999999999999985 344444
No 360
>2d07_B Ubiquitin-like protein SMT3B; hydrolase; 2.10A {Homo sapiens} SCOP: d.15.1.1 PDB: 2rpq_A 2awt_A 2io3_B 2iyd_B 1u4a_A 2k1f_A
Probab=41.02 E-value=37 Score=32.25 Aligned_cols=39 Identities=15% Similarity=0.295 Sum_probs=36.0
Q ss_pred ceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCc
Q psy8107 275 KSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPM 313 (1613)
Q Consensus 275 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~ 313 (1613)
-.++|.-++|..+.+.|++..++..+..+.|++.+++|.
T Consensus 18 i~ikV~~~~g~~i~~~v~~~t~l~kl~~~y~~~~gi~~~ 56 (93)
T 2d07_B 18 INLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMR 56 (93)
T ss_dssp EEEEEECTTSCEEEEEEETTSCHHHHHHHHHHHHTCCGG
T ss_pred EEEEEECCCCCEEEEEEccCCHHHHHHHHHHHHhCCCcc
Confidence 467888899999999999999999999999999999886
No 361
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=39.53 E-value=21 Score=41.29 Aligned_cols=46 Identities=9% Similarity=0.115 Sum_probs=39.6
Q ss_pred CceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccce-eeee
Q psy8107 274 DKSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHF-VRVK 320 (1613)
Q Consensus 274 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~-~~~~ 320 (1613)
...++|.|+|| .+.+.+.+..|+.|++...|+.-+|.-.++| |...
T Consensus 22 ~~~~~V~lldg-~~~~~v~~~t~~~el~~~v~~~l~L~e~~~FgL~~~ 68 (314)
T 1h4r_A 22 TFTVRIVTMDA-EMEFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQYT 68 (314)
T ss_dssp EEEEEEECSSC-EEEEEEETTCBHHHHHHHHHHHHTCCCGGGEEEEEE
T ss_pred eeEEEEEeCCc-eEEEEeCCCCcHHHHHHHHHHHhCCCCCccceEEEE
Confidence 35779999999 7889999999999999999999999766666 6655
No 362
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=37.19 E-value=50 Score=34.03 Aligned_cols=65 Identities=14% Similarity=0.152 Sum_probs=48.2
Q ss_pred eEEEEEEeecceEEEecCCcCCCCcceEEEEEeecccccCC-ccceEEeecCChHHHHHHHHHHHHHHHHh
Q psy8107 1329 IIRYQVLVPVTEVQVRASSAKDMDSHFLWELIHLRSQIQRR-TEKVYVLSNSTAEFRNAFLKTIRQIIRES 1398 (1613)
Q Consensus 1329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1398 (1613)
-+.|+..+|+..+||+...... -.|.+ .+-+...|+ .+.+..++.++++-|..|+..++.-|.|.
T Consensus 59 ~Y~vr~~~~L~gm~V~~~e~e~-~p~~~----~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~ 124 (140)
T 3qwm_A 59 TYSFRQSFSLYGMQVLLFENQY-YPNGI----RLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEV 124 (140)
T ss_dssp CCCCEEEECCTTEEEEEECCSS-CTTEE----EEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeeecceEEEcccCCC-CceEE----EEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 4667778999999999876543 23333 334444454 45579999999999999999999988764
No 363
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=36.42 E-value=47 Score=33.39 Aligned_cols=59 Identities=10% Similarity=0.233 Sum_probs=41.5
Q ss_pred eecceEEEecCCcCCCCcceEEEEEeeccc----------------ccCCccceEEeecCChHHHHHHHHHHHHHHH
Q psy8107 1336 VPVTEVQVRASSAKDMDSHFLWELIHLRSQ----------------IQRRTEKVYVLSNSTAEFRNAFLKTIRQIIR 1396 (1613)
Q Consensus 1336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1396 (1613)
||+...+|..... ....|..+|+|--.+ +|+.+.+.|.|+..++|.++..+++|+..++
T Consensus 50 I~L~~~~v~~~~~--~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~ 124 (130)
T 1v88_A 50 VLLNACEIIERPS--KKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALK 124 (130)
T ss_dssp EECSSCEECCCCT--TTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEcCCCEEEECCC--CCCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 6666666643221 122377888885322 2445567899999999999999999999886
No 364
>2k8h_A Small ubiquitin protein; SUMO, post-translational modifier, signaling protein; NMR {Trypanosoma brucei}
Probab=35.99 E-value=72 Score=31.43 Aligned_cols=39 Identities=13% Similarity=0.288 Sum_probs=36.4
Q ss_pred ceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCc
Q psy8107 275 KSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPM 313 (1613)
Q Consensus 275 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~ 313 (1613)
-.++|--++|..+.+.|++.+++..+..+.|++.+++|.
T Consensus 27 I~IkVk~~~g~~i~fkVk~~t~l~kL~~ay~ek~gi~~~ 65 (110)
T 2k8h_A 27 VAVKVVNADGAEMFFRIKSRTALKKLIDTYCKKQGISRN 65 (110)
T ss_dssp EEEEEEETTSCCEEEEECTTSSHHHHHHHHHHHHTCCSS
T ss_pred EEEEEECCCCCEEEEEECCCChHHHHHHHHHHHhCCCcc
Confidence 467888899999999999999999999999999999987
No 365
>1wm3_A Ubiquitin-like protein SMT3B; ubiquitin fold, half-open barrel, two helices, protein transport; 1.20A {Homo sapiens} SCOP: d.15.1.1 PDB: 1wm2_A 3uin_B 3uio_B 2ckh_B
Probab=35.95 E-value=31 Score=31.01 Aligned_cols=44 Identities=16% Similarity=0.346 Sum_probs=37.6
Q ss_pred eEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccceeeeee
Q psy8107 276 SVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFVRVKK 321 (1613)
Q Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~~~~~ 321 (1613)
.++|--++|..+.+.|++..+++.+..+.|++.+++|.. +|+.+
T Consensus 3 ~lkV~~~~g~~v~~~v~~~t~l~kl~~~y~~~~gi~~~~--~rf~f 46 (72)
T 1wm3_A 3 NLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQ--IRFRF 46 (72)
T ss_dssp EEEEECTTSCEEEEEECTTSCTHHHHHHHHHHHTCCTTT--CEEEE
T ss_pred EEEEECCCCCEEEEEECCCChHHHHHHHHHHHhCCCcce--EEEEE
Confidence 467888999999999999999999999999999999853 44444
No 366
>1wz0_A Ubiquitin-like protein SMT3B; SUMO-2, ubiquitin-like molecule, structural genomics, sentrin2, NPPFSA; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=35.66 E-value=54 Score=31.97 Aligned_cols=39 Identities=15% Similarity=0.295 Sum_probs=36.2
Q ss_pred ceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCc
Q psy8107 275 KSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPM 313 (1613)
Q Consensus 275 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~ 313 (1613)
-.++|.-++|..+.+.|++.+++..+..+.|++.+++|.
T Consensus 25 I~IkVk~~~g~~i~~kVk~~t~l~kL~~~y~ek~gi~~~ 63 (104)
T 1wz0_A 25 INLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMR 63 (104)
T ss_dssp EEEEEECSSSCEEEEEECTTSCHHHHHHHHHHHHTCCTT
T ss_pred EEEEEECCCCCEEEEEEcCCChHHHHHHHHHHHhCCCcc
Confidence 467888899999999999999999999999999999885
No 367
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=35.54 E-value=76 Score=32.08 Aligned_cols=53 Identities=4% Similarity=0.141 Sum_probs=38.7
Q ss_pred eecceEEEecCCc-CC-CCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHH
Q psy8107 1336 VPVTEVQVRASSA-KD-MDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIR 1396 (1613)
Q Consensus 1336 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1396 (1613)
|++....|..-.. .+ ....+.+|++| +++ .|.|++.+.|.++..+++|...+.
T Consensus 56 I~L~g~tV~~~~~~~~~~~~k~~F~~v~-----~~~---ty~~~Adseee~~~WikAi~~A~~ 110 (126)
T 1wi1_A 56 LQLDGYTVDYTDPQPGLEGGRAFFNAVK-----EGD---TVIFASDDEQDRILWVQAMYRATG 110 (126)
T ss_dssp EECSSCEEEECCCCSSCCSCSSEEEEEC-----SSC---EEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EECCCcEEEEecCCcccccCceEEEEec-----CCc---eEEEEcCCHHHHHHHHHHHHHHhc
Confidence 7777777764321 12 33568899987 233 499999999999999999987764
No 368
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=34.25 E-value=29 Score=43.45 Aligned_cols=45 Identities=9% Similarity=0.056 Sum_probs=39.2
Q ss_pred ceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCC-ccce-eee
Q psy8107 275 KSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNP-MEHF-VRV 319 (1613)
Q Consensus 275 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~-~~~~-~~~ 319 (1613)
..+.|.||||+...+.|.+..|++|++..+|+.-+|.+ .++| |.+
T Consensus 217 ~~~~V~l~dg~~~~~~v~~~tt~~el~~~v~~~lgL~e~~~~FgL~~ 263 (555)
T 3au4_A 217 MTSTVYCHGGGSCKITINSHTTAGEVVEKLIRGLAMEDSRNMFALFE 263 (555)
T ss_dssp EEEEEEETTSCEEEEEECTTCBHHHHHHHHHHHTTCTTCCSEEEEEE
T ss_pred cceEEEecCCCeEEEEeCCCCcHHHHHHHHHHHcCCCCCCCceEEEE
Confidence 46799999999999999999999999999999999975 4454 554
No 369
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=34.15 E-value=54 Score=34.14 Aligned_cols=41 Identities=10% Similarity=0.377 Sum_probs=33.3
Q ss_pred CCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHHHhh
Q psy8107 1351 MDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIRESV 1399 (1613)
Q Consensus 1351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1399 (1613)
.+..+..++++ ++++|.|+..++|.+++-+++|+++|+.+-
T Consensus 84 ~~~~~~f~i~t--------~~rt~~l~A~s~~e~~~Wi~aL~~~i~~n~ 124 (164)
T 2lul_A 84 CQNKYPFQVVH--------DANTLYIFAPSPQSRDLWVKKLKEEIKNNN 124 (164)
T ss_dssp SSSCSEEEEEC--------SSCEEEEECSSHHHHHHHHHHHHHHHTTCS
T ss_pred cccceeEEEec--------CCcEEEEECCCHHHHHHHHHHHHHHHHHCh
Confidence 34456667765 467899999999999999999999998654
No 370
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=33.90 E-value=80 Score=31.08 Aligned_cols=56 Identities=13% Similarity=0.179 Sum_probs=40.9
Q ss_pred eecceEEEecCCcCCCCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHH
Q psy8107 1336 VPVTEVQVRASSAKDMDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIR 1396 (1613)
Q Consensus 1336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1396 (1613)
|++...+|...........+..+|.|.. ..+++|.+++.+.|.+...+++||+.+.
T Consensus 64 I~L~~~~v~~~~~~~~~k~~~F~I~~~~-----~~~~~~~~~A~s~ee~~~Wi~ai~~a~~ 119 (124)
T 2w2x_D 64 LDLNTYNVVKAPQGKNQKSFVFILEPKQ-----QGDPPVEFATDKVEELFEWFQSIREITW 119 (124)
T ss_dssp EEGGGEEEEECTTCBTTBSEEEEEEECC-------CCCEEEEECCCHHHHHHHHHHHHHHC
T ss_pred EECCCCEEEEccCCcCCCCEEEEEECCC-----CCCceEEEEECCHHHHHHHHHHHHHHHH
Confidence 7777777765543224456788887732 2367899999999999999999998764
No 371
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=33.88 E-value=66 Score=29.95 Aligned_cols=55 Identities=13% Similarity=0.292 Sum_probs=40.0
Q ss_pred eecceEEEecCCc--CCCCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHHH
Q psy8107 1336 VPVTEVQVRASSA--KDMDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIRE 1397 (1613)
Q Consensus 1336 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1397 (1613)
|++....|..... .+....+..++++- ..++|.|+..+.+.+++-+.+|++.|.+
T Consensus 50 i~L~~~~v~~~~~~~~~~~~~~~F~i~~~-------~~r~~~l~a~s~~e~~~Wi~ai~~~i~~ 106 (108)
T 1u5d_A 50 FLIKGYSVRMAPHLRRDSKKESCFELTSQ-------DRRTYEFTATSPAEARDWVDQISFLLKD 106 (108)
T ss_dssp EECTTCEEEECGGGCSSGGGGGEEEEECS-------SSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEecceEEEeCCccccccCCcceEEEEcC-------CCcEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 6666666665432 23344567777652 2488999999999999999999998864
No 372
>3kyd_D Small ubiquitin-related modifier 1; SUMO, thioester, adenylation, inhibitor, TETR intermediate, ligase, nucleus, phosphoprotein; HET: VMX; 2.61A {Homo sapiens} SCOP: d.15.1.1
Probab=33.47 E-value=51 Score=32.86 Aligned_cols=71 Identities=17% Similarity=0.179 Sum_probs=49.9
Q ss_pred ceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccceeeeeeecccccccc-cCCCchhhHHHhhhccceeeecc
Q psy8107 275 KSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFVRVKKRREMEDHNY-FVPPRGDLIETYLSTHEVVEVCA 353 (1613)
Q Consensus 275 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~iEv~~ 353 (1613)
..++|.-.||..+..-|++..+..-+..+.|++.++++. .+|++-+++..+- -.|..- .|+ ..|.|||+.
T Consensus 41 I~LKV~~qdg~ev~fkIk~tt~L~KLm~aY~er~Gl~~~----~irFlFDG~rI~~~~TP~dL-~ME----DgD~IdV~~ 111 (115)
T 3kyd_D 41 IKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMN----SLRFLFEGQRIADNHTPKEL-GME----EEDVIEVYQ 111 (115)
T ss_dssp EEEEEECTTSCEEEEEEETTSCTHHHHHHHHHHHTCCTT----SEEEEETTEECCTTCCTTTT-TCC----TTCEEEEEE
T ss_pred EEEEEEcCCCCEEEEEEccCChHHHHHHHHHHHhCCChh----hEEEEECCeECCCCCCHHHc-CCC----CCCEEEEEe
Confidence 467899999999999999999999999999999999865 3444444442222 244432 232 246788765
Q ss_pred c
Q psy8107 354 K 354 (1613)
Q Consensus 354 ~ 354 (1613)
.
T Consensus 112 ~ 112 (115)
T 3kyd_D 112 E 112 (115)
T ss_dssp C
T ss_pred e
Confidence 3
No 373
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=32.26 E-value=65 Score=36.96 Aligned_cols=67 Identities=12% Similarity=0.180 Sum_probs=43.8
Q ss_pred eEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccceeeeeeecccccccccCCCchhhHHHhhh
Q psy8107 276 SVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFVRVKKRREMEDHNYFVPPRGDLIETYLS 344 (1613)
Q Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 344 (1613)
.++|.+.||-..+|.|-++|||+||+...|.+.+++......-+-...+.+ .+- .=+..|.+.+++.
T Consensus 33 ivkv~~~D~ss~~l~V~~~~TA~dv~~~L~~k~~~~~~~~W~L~E~~~~l~-lER-~ledhE~V~dvl~ 99 (281)
T 4gmv_A 33 VIRVHMSDDSSKTMMVDERQTVRQVLDNLMDKSHCGYSLDWSLVETVSELQ-MER-IFEDHENLVENLL 99 (281)
T ss_dssp EEEEEETTSCEEEEEEETTCBHHHHHHHHHHHSCCCCCTTCEEEEEEGGGT-EEE-ECCTTSBHHHHHT
T ss_pred EEEEEecCCCEEEEEECCCCcHHHHHHHHHHhcCCCCCCCeEEEEEcCCcc-cee-ccccchhHHHHHH
Confidence 568999999999999999999999999888766664444333333333311 221 2234455555553
No 374
>3dbh_I NEDD8; cell cycle, activating enzyme, apoptosis, membrane, UBL conjugation pathway, ATP-binding, ligase, nucleotide- binding, polymorphism; 2.85A {Homo sapiens} SCOP: d.15.1.1 PDB: 3dbr_I 3dbl_I
Probab=29.42 E-value=82 Score=28.68 Aligned_cols=44 Identities=11% Similarity=0.171 Sum_probs=38.0
Q ss_pred CceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCcccee
Q psy8107 274 DKSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFV 317 (1613)
Q Consensus 274 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~ 317 (1613)
.-.+.|..++|+...+.+.+.+||.|+-...|+..++.|...-|
T Consensus 12 ~m~i~vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~gip~~~qrL 55 (88)
T 3dbh_I 12 SMLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRL 55 (88)
T ss_dssp CEEEEEECTTSCEEEEEECTTCBHHHHHHHHHHHHCCCGGGCCE
T ss_pred cEEEEEEcCCCCEEEEEECCCCCHHHHHHHHHHHHCcCHHHEEE
Confidence 45678888899999999999999999999999999998776533
No 375
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=29.20 E-value=44 Score=42.20 Aligned_cols=46 Identities=11% Similarity=0.185 Sum_probs=39.2
Q ss_pred ceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccce-eeeee
Q psy8107 275 KSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHF-VRVKK 321 (1613)
Q Consensus 275 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~-~~~~~ 321 (1613)
..++|.|||| .+.+.|.+..|+.|++...|+.-+|-...+| |.+..
T Consensus 5 i~v~V~llDg-t~e~~vd~~tt~~ell~~V~~~LgL~e~~~FGL~~~d 51 (575)
T 2i1j_A 5 MNVRVTTMDA-ELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTD 51 (575)
T ss_dssp EEEEEECSSC-EEEEEEETTCBHHHHHHHHHHHHTCCCGGGEEEEEEB
T ss_pred EEEEEEeCCC-eEEEEECCCCCHHHHHHHHHHHcCCCCccceeEEEEe
Confidence 4679999999 6789999999999999999999999666666 76653
No 376
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=28.94 E-value=1.1e+02 Score=29.07 Aligned_cols=56 Identities=13% Similarity=0.255 Sum_probs=39.2
Q ss_pred eecceEEEecCCcCCCCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHHHh
Q psy8107 1336 VPVTEVQVRASSAKDMDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIRES 1398 (1613)
Q Consensus 1336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1398 (1613)
|++....+......+....+..+|++ ...++|.|+..+.+.++..+++|++.+...
T Consensus 48 i~L~~~~~~~~~~~~~~~~~~F~i~~-------~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~ 103 (113)
T 1pls_A 48 IPLKGSTLTSPCQDFGKRMFVFKITT-------TKQQDHFFQAAFLEERDAWVRDINKAIKCI 103 (113)
T ss_dssp EESSSCCEESSCCSSCCSSSEEEEEE-------TTTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCEEEEecCCCCCCccEEEEEc-------CCCCEEEEECCCHHHHHHHHHHHHHHHhcc
Confidence 55555555432233344556677765 224799999999999999999999988643
No 377
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=28.20 E-value=72 Score=32.93 Aligned_cols=35 Identities=11% Similarity=0.101 Sum_probs=28.9
Q ss_pred ceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHH
Q psy8107 1354 HFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIR 1396 (1613)
Q Consensus 1354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1396 (1613)
.+..+++. +++.|.++..++|.++..+++|+.++.
T Consensus 79 ~~~F~I~t--------~~r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 79 CAKFTLVL--------PKEEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp CCEEEEEC--------SSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEc--------CCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 45666654 457799999999999999999998876
No 378
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=27.25 E-value=99 Score=29.77 Aligned_cols=61 Identities=20% Similarity=0.367 Sum_probs=39.8
Q ss_pred eecceEEEecCCcCCCCcceEEEEEeeccc--------------ccCCccceEEeecCChHHHHHHHHHHHHHHHHh
Q psy8107 1336 VPVTEVQVRASSAKDMDSHFLWELIHLRSQ--------------IQRRTEKVYVLSNSTAEFRNAFLKTIRQIIRES 1398 (1613)
Q Consensus 1336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1398 (1613)
|++...+|+... +.+..+..++++.... .-..++++|.|+..+.+.++..+.+|++.|..+
T Consensus 48 i~L~~~~v~~~~--~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 122 (127)
T 1fgy_A 48 IPLENLSIREVL--DPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 122 (127)
T ss_dssp EECTTCEEEEEC--CSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred EECCceEEEEcc--CCCCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhccC
Confidence 666666665433 2234455666643211 111246799999999999999999999988643
No 379
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.09 E-value=90 Score=29.93 Aligned_cols=41 Identities=12% Similarity=0.212 Sum_probs=33.9
Q ss_pred ceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHHHhhhcc
Q psy8107 1354 HFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIRESVRNM 1402 (1613)
Q Consensus 1354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1402 (1613)
.+..+|+. ++++|.|+..+.|.++.-+.+|++.+.+..++.
T Consensus 67 ~~~F~I~~--------~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~~ 107 (114)
T 2da0_A 67 KKSFDLIS--------HNRTYHFQAEDEQDYVAWISVLTNSKEEALTMA 107 (114)
T ss_dssp SSCEEEEE--------TTEEEEEECSSHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCEEEEEc--------CCcEEEEEcCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 34566662 578999999999999999999999998877754
No 380
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=26.73 E-value=1.4e+02 Score=29.71 Aligned_cols=80 Identities=11% Similarity=0.065 Sum_probs=55.1
Q ss_pred eEEEEEEeCCeEEEecCCCcCCCCCCCCCCceeEeCceEEeeCCCCCCCCceEEEEcCC-CCeEEe--ecCCHH-HHHHH
Q psy8107 24 KGYWVCLKGTTLLFYPCDSREGRSVDAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAF-GDAYLF--QAPCQV-ELENW 99 (1613)
Q Consensus 24 k~~~~vLkG~~L~fyKd~~~~~~~~~~~p~~~I~l~~~~~~~a~dy~KK~nVF~L~t~d-g~~yLF--QA~~~~-em~~W 99 (1613)
+..++-|=...|.|-|.... .......-++.|.+.+.-.+...+- .-+.-|.+-... -..|.. ||++.+ .-+.|
T Consensus 26 ~eR~vFLFe~~ilf~K~~~~-~~~~~Y~~K~~ikl~~~~lte~~~~-~d~~kFeiw~~~~~~~~il~~qA~s~e~~K~~W 103 (119)
T 1fho_A 26 KLRYVFLFRNKIMFTEQDAS-TSPPSYTHYSSIRLDKYNIRQHTTD-EDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAW 103 (119)
T ss_dssp EEEEEEEETTEEEEEEECCS-SSSCCCSSCCEEESSSCEEEEECTT-CCEEEEECCSTTCCCBCCCCCSSSSCSHHHHHH
T ss_pred ceEEEEEecCcEEEEEEecC-CCCCcEEEeeEEeeceeEEEecCCC-CCCcEEEEccCCCCceEEEeeecCCcHHHHHHH
Confidence 56788888888888887622 2233456677888886644443221 123457776655 356778 999999 99999
Q ss_pred HHHHHH
Q psy8107 100 VNSIHS 105 (1613)
Q Consensus 100 i~~I~~ 105 (1613)
++.|+.
T Consensus 104 v~~I~~ 109 (119)
T 1fho_A 104 LRDIAE 109 (119)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 999986
No 381
>3mtn_B UBA80, ubcep1, ubiquitin variant UBV.21.4; ubiquitin-specific protease activity, hydrolase, ubiquitin B structural genomics consortium, SGC; 2.70A {Homo sapiens} SCOP: d.15.1.1
Probab=26.05 E-value=72 Score=28.75 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=36.8
Q ss_pred eEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCcccee
Q psy8107 276 SVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFV 317 (1613)
Q Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~ 317 (1613)
.+.|..++++...+.+.+.+||.|+-..+++..++.|..--|
T Consensus 5 ~i~vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~~i~~~~qrL 46 (85)
T 3mtn_B 5 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 46 (85)
T ss_dssp EEEEECTTSCEEEEEECTTCBHHHHHHHHHHHHCCCGGGCEE
T ss_pred EEEEEcCCCCEEEEEECCCCCHHHHHHHHHHHHCcChHHEEE
Confidence 567888999999999999999999999999999998776533
No 382
>3a4r_A Nfatc2-interacting protein; ubiquitin fold, coiled coil, cytoplasm, methylation, nucleus, transcription; 1.00A {Mus musculus} PDB: 3a4s_C 3rd2_A
Probab=25.57 E-value=92 Score=28.50 Aligned_cols=46 Identities=9% Similarity=0.088 Sum_probs=39.1
Q ss_pred CceEEEEcCCCC-eEEEEecCCCcHHHHHHhHccccccCCccceeeeee
Q psy8107 274 DKSVKVSLPENQ-YAHVYLKDSMTVEEFLANACSRKNLNPMEHFVRVKK 321 (1613)
Q Consensus 274 ~~~~~v~~~~~~-~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~~~~~ 321 (1613)
.-.++|.-++|. .+.+.|++.+++..+..+.|++.+++|.. +|+.+
T Consensus 7 ~i~ikV~~~~g~~~i~~~i~~~t~l~kl~~~y~~~~gi~~~~--~rf~f 53 (79)
T 3a4r_A 7 ELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLSGHK--LSFFF 53 (79)
T ss_dssp CEEEEEECSSTTCEEEEEECTTSCHHHHHHHHHHHHTCTTCC--CEEEE
T ss_pred EEEEEEEeCCCCEEEEEEECCCChHHHHHHHHHHHhCCCccc--EEEEE
Confidence 346788889994 99999999999999999999999999874 45544
No 383
>1a62_A RHO; transcription termination, termination, RNA binding domain, transcription regulation, OB fold, F1-ATPase; 1.55A {Escherichia coli BL21} SCOP: a.140.3.1 b.40.4.5 PDB: 1a63_A 2a8v_A 1a8v_A
Probab=25.43 E-value=36 Score=34.61 Aligned_cols=39 Identities=31% Similarity=0.308 Sum_probs=24.2
Q ss_pred CccceEEEEeec--ccccccCcceeEEEEecCCChhhhcCCCCCCEEEEE
Q psy8107 368 HMWGFSVEAELT--ENAERQDELCCYVSRVEDKSVAMHNGLIKGDEIMVI 415 (1613)
Q Consensus 368 ~~~GF~v~~~~~--~~~~~~~~~~~~Vs~V~~gg~A~~~GL~~GDeIl~v 415 (1613)
+|||| |+.. . =..+..| +||| .+.-.+-||+.||.|.-.
T Consensus 60 dG~GF-lr~~-~~~y~~~~~D---iyVs----~~~irrf~lr~GD~V~g~ 100 (130)
T 1a62_A 60 DGFGF-LRSA-DSSYLAGPDD---IYVS----PSQIRRFNLRTGDTISGK 100 (130)
T ss_dssp TSCEE-EECG-GGTTCCCTTC---EEEC----HHHHHHTTCCTTCEEEEE
T ss_pred CCeEE-EecC-CcCCCCCCCC---EEEC----HHHHhHhCCCCCCEEEEE
Confidence 78999 5551 0 0012233 8987 234466799999998653
No 384
>2wsw_A BCCT family betaine/carnitine/choline transporter; transport protein, SD methionine, membrane protein; HET: CM5 1PE; 2.29A {Proteus mirabilis} PDB: 2wsx_A* 3hfx_A*
Probab=25.34 E-value=1.2e+02 Score=37.76 Aligned_cols=66 Identities=6% Similarity=0.050 Sum_probs=40.9
Q ss_pred HHHHHHhccCCChhccceeeeccccc-cccChhHHHHHHhhHHHhhcc-cc------cceehhccccCCCCcc-ccceeh
Q psy8107 1043 TIFFIRGITLPGAGAGLVHMYTPKVE-KLLDPNVWLDAATQVFYSFGL-AF------GSLIAFGSYNQPNNNC-VRDVIM 1113 (1613)
Q Consensus 1043 ~iLlir~ltL~Ga~~Gl~~lf~Pd~s-~L~~~~vW~~A~~QaFfSLsl-G~------G~mitygSY~~~~~ni-~rda~~ 1113 (1613)
+.++.+++. |=+.||..|-.. .=.+.+.-..|+.+.||..|+ ++ |..++|.+|++++... .|+++.
T Consensus 107 iGl~fwgva-----EP~~h~~~pP~~~~~~s~eAa~~Am~~tffHWG~~~WaiYal~~lalayf~y~r~~~pl~iss~l~ 181 (509)
T 2wsw_A 107 AAVLFWGSI-----EIYYYISSPPFGMEGYSAPAKEIGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLV 181 (509)
T ss_dssp HHHHHHHHH-----HHHHHHHSCSTTCCTTCHHHHHHHHHHHHHHTSHHHHHTTHHHHHHHHHHHHTSCCCCCSGGGGCH
T ss_pred hHHhhhhhh-----hhHHHccCCCCCCCCCcHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHcCCCCcchHHHhH
Confidence 445555443 334444444322 223578889999999999996 33 4446799998876665 555543
No 385
>3qx1_A FAS-associated factor 1; UBX, protein binding, P97 binding; 1.60A {Homo sapiens} PDB: 3qwz_B* 3qc8_B 3qca_A 3qq8_B 3r3m_B 1h8c_A
Probab=24.74 E-value=99 Score=28.52 Aligned_cols=41 Identities=15% Similarity=0.240 Sum_probs=31.7
Q ss_pred CCCCCceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccC
Q psy8107 270 RDEPDKSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLN 311 (1613)
Q Consensus 270 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~ 311 (1613)
..++...+.+-||||..+.-.+...+|+.|+..-+-. ++.+
T Consensus 3 ~~~~~~~i~iRlpdG~r~~~~F~~~~tl~~v~~fv~~-~~~~ 43 (84)
T 3qx1_A 3 HMEPVSKLRIRTPSGEFLERRFLASNKLQIVFDFVAS-KGFP 43 (84)
T ss_dssp -CCCEEEEEEECTTSCEEEEEEETTSBHHHHHHHHHH-TTCC
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCCCHHHHHHHHHH-cCCC
Confidence 4566678899999999999999999999998874433 3344
No 386
>1ndd_A NEDD8, protein (ubiquitin-like protein NEDD8); proteolysis, signaling protei; 1.60A {Homo sapiens} SCOP: d.15.1.1 PDB: 1r4m_I 1r4n_I* 1xt9_B 2ko3_A 3gzn_I* 2bkr_B 2nvu_I* 3dqv_A 1bt0_A
Probab=24.39 E-value=75 Score=27.86 Aligned_cols=41 Identities=12% Similarity=0.208 Sum_probs=35.2
Q ss_pred EEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCcccee
Q psy8107 277 VKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFV 317 (1613)
Q Consensus 277 ~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~ 317 (1613)
+.|..++|+...+-+.++.||.|+-...++..++.|..--|
T Consensus 3 i~vk~~~g~~~~~~v~~~~tv~~lK~~i~~~~~i~~~~q~L 43 (76)
T 1ndd_A 3 IKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRL 43 (76)
T ss_dssp EEEECTTSCEEEEECCTTCBHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEECCCCCEEEEEECCCChHHHHHHHHHHHHCcChHHEEE
Confidence 56778899999999999999999999999999988765333
No 387
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.93 E-value=2e+02 Score=27.65 Aligned_cols=31 Identities=16% Similarity=0.125 Sum_probs=28.3
Q ss_pred cceEEeecCChHHHHHHHHHHHHHHHHhhhc
Q psy8107 1371 EKVYVLSNSTAEFRNAFLKTIRQIIRESVRN 1401 (1613)
Q Consensus 1371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1401 (1613)
+++|.|+..+.+.++..+.+|++.+++-...
T Consensus 79 ~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (119)
T 2dhk_A 79 SRVITLKAATKQAMLYWLQQLQMKRWEFHNS 109 (119)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred CcEEEEECCCHHHHHHHHHHHHHHHHHhcCC
Confidence 7899999999999999999999999887665
No 388
>2dhz_A RAP guanine nucleotide exchange factor (GEF)- like 1; LINK guanine nucleotide exchange factor II, LINK-gefii, RA domain, structural genomics; NMR {Homo sapiens}
Probab=23.91 E-value=1.3e+02 Score=30.12 Aligned_cols=38 Identities=16% Similarity=0.363 Sum_probs=34.3
Q ss_pred CceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccC
Q psy8107 274 DKSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLN 311 (1613)
Q Consensus 274 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~ 311 (1613)
+..++|+.||.-.+++.++.+-||+|+|.++..+-+.+
T Consensus 9 ei~~~VY~~Dhsy~tvr~~v~~sa~eIl~~va~kl~~~ 46 (120)
T 2dhz_A 9 EIFCRVYMPDHSYVTIRSRLSASVQDILGSVTEKLQYS 46 (120)
T ss_dssp CEEECEECTTSCCCCEEECTTCCHHHHHHHHHHHSTTC
T ss_pred cEEEEEEeccCceEEEEEeccccHHHHHHHHHHHhccc
Confidence 56789999999999999999999999999998777764
No 389
>3a9j_A Ubiquitin; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 3a1q_B 2znv_B 3a9k_A 3h7p_A 3jsv_A 3dvg_Y 3dvn_Y 3nob_A 2o6v_D* 3jw0_X 3jvz_X 3nhe_B* 1aar_A 1d3z_A 1f9j_A 1fxt_B 1g6j_A 1nbf_C 1cmx_B 1q5w_B ...
Probab=23.91 E-value=72 Score=27.99 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=35.1
Q ss_pred EEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCcccee
Q psy8107 277 VKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFV 317 (1613)
Q Consensus 277 ~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~ 317 (1613)
+.|..++|+...+.+.++.||.|+-...++..++.|..--|
T Consensus 3 i~vk~~~g~~~~i~v~~~~tv~~lK~~i~~~~~i~~~~q~L 43 (76)
T 3a9j_A 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 43 (76)
T ss_dssp EEEEETTSCEEEEECCTTCBHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEcCCCCEEEEEECCCCcHHHHHHHHHHHHCcCHHHeEE
Confidence 56778899999999999999999999999999988765433
No 390
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=23.88 E-value=1.5e+02 Score=29.36 Aligned_cols=57 Identities=12% Similarity=0.171 Sum_probs=40.2
Q ss_pred eecceEEEecCCcCCCCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHHHhhh
Q psy8107 1336 VPVTEVQVRASSAKDMDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIRESVR 1400 (1613)
Q Consensus 1336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1400 (1613)
|++....|... ...+.-.++.+|.+ ...+.|.++..+.|.++..+++|+..|....|
T Consensus 72 I~L~~~~v~~~-~~~~kr~~~F~l~t-------~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~~~ 128 (129)
T 2p0d_A 72 VDLRGAALAHG-RHLSSRRNVLHIRT-------IPGHEFLLQSDHETELRAWHRALRTVIERLVR 128 (129)
T ss_dssp EECTTCEEEEC-TTSCSSSSEEEEEC-------TTSCEEEEECSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCcEEEEC-CCCCCCCcEEEEEc-------CCCCEEEEECCCHHHHHHHHHHHHHHHHhccC
Confidence 56655555432 22234457788764 33568999999999999999999999987554
No 391
>2uyz_B Small ubiquitin-related modifier 1; sumoylation, cell division, nuclear protein, ubiquitin-like modifier, UBL conjugation pathway; 1.4A {Homo sapiens} SCOP: d.15.1.1 PDB: 2vrr_B 2iy0_B 2iy1_B 2g4d_B 2las_A 2io2_B 1z5s_B 3uip_B* 1tgz_B* 2bf8_B
Probab=23.85 E-value=64 Score=28.92 Aligned_cols=39 Identities=15% Similarity=0.229 Sum_probs=35.1
Q ss_pred eEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCcc
Q psy8107 276 SVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPME 314 (1613)
Q Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~ 314 (1613)
.+.|-.++|+.+.+.|.+.+|+.++-...|+..++.|..
T Consensus 5 ~i~vk~~~g~~~~~~v~~~~tv~~lk~~i~~~~gi~~~~ 43 (79)
T 2uyz_B 5 KLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNS 43 (79)
T ss_dssp EEEEECTTCCEEEEEEETTSCTHHHHHHHHHHHTCCGGG
T ss_pred EEEEECCCCCEEEEEECCCChHHHHHHHHHHHHCCCccc
Confidence 457778899999999999999999999999999998764
No 392
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=23.73 E-value=1.2e+02 Score=29.63 Aligned_cols=28 Identities=21% Similarity=0.315 Sum_probs=24.8
Q ss_pred ccceEEeecCChHHHHHHHHHHHHHHHH
Q psy8107 1370 TEKVYVLSNSTAEFRNAFLKTIRQIIRE 1397 (1613)
Q Consensus 1370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1397 (1613)
+.++|.|+..+.+.+++.+.+|++.|..
T Consensus 102 ~~r~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 102 CVTKNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp EEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 3468999999999999999999998864
No 393
>1wgy_A RAP guanine nucleotide exchange factor 5; ubiquitin fold, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=23.19 E-value=60 Score=31.79 Aligned_cols=38 Identities=21% Similarity=0.227 Sum_probs=34.0
Q ss_pred CceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccC
Q psy8107 274 DKSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLN 311 (1613)
Q Consensus 274 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~ 311 (1613)
+...+|+.||.-.+++.++.+.||+|++.++..+-+..
T Consensus 9 ~i~~~Vy~~Dhsy~tvr~~v~~sa~eIl~~va~kl~~~ 46 (104)
T 1wgy_A 9 EIFCHVYITEHSYVSVKAKVSSIAQEILKVVAEKIQYA 46 (104)
T ss_dssp CCCEEEECSSSCEEEECCCTTCBSHHHHHHHHHHHTSC
T ss_pred ceEEEEEeccCceEEEEEeccchHHHHHHHHHHHhcCC
Confidence 56789999999999999999999999999988877654
No 394
>2dzi_A Ubiquitin-like protein 4A; GDX, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.17 E-value=1.3e+02 Score=26.72 Aligned_cols=44 Identities=7% Similarity=0.056 Sum_probs=36.6
Q ss_pred CceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCcccee
Q psy8107 274 DKSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFV 317 (1613)
Q Consensus 274 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~ 317 (1613)
.-.+.|..++|+...+-+.++.||+|+-...++..++.|..--|
T Consensus 7 ~m~i~vk~~~g~~~~~~v~~~~tV~~LK~~i~~~~~i~~~~qrL 50 (81)
T 2dzi_A 7 GMQLTVKALQGRECSLQVPEDELVSTLKQLVSEKLNVPVRQQRL 50 (81)
T ss_dssp SEEEEEEETTSCEEEEEECSSCBHHHHHHHHHHHTCCCTTTCEE
T ss_pred cEEEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHHCcCHHHEEE
Confidence 34567777899999999999999999999999999988765433
No 395
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=23.11 E-value=61 Score=41.52 Aligned_cols=45 Identities=11% Similarity=0.148 Sum_probs=39.4
Q ss_pred ceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccce-eee
Q psy8107 275 KSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHF-VRV 319 (1613)
Q Consensus 275 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~-~~~ 319 (1613)
-.++|.||||+...+.|.+..|+.|++...|+.-+|-...+| |..
T Consensus 264 i~~~V~llDgt~~~~~vds~Tt~~ell~~V~~~LgL~e~~~FgL~~ 309 (655)
T 3pvl_A 264 IMLPVTFMDGTTKTLLTDSATTARELCNALADKISLKDRFGFSLYI 309 (655)
T ss_dssp EEEEEEETTSCEEEEEECTTCBHHHHHHHHHHHTTCSSCTTEEEEE
T ss_pred eEEEEEecCCceEEEEEccCCcHHHHHHHHHHHcCCcccccceeEE
Confidence 467999999999999999999999999999999999665555 544
No 396
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=22.99 E-value=1.2e+02 Score=29.43 Aligned_cols=56 Identities=16% Similarity=0.255 Sum_probs=37.7
Q ss_pred eecceEE-EecCCcCCCCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHHHhhhcc
Q psy8107 1336 VPVTEVQ-VRASSAKDMDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIRESVRNM 1402 (1613)
Q Consensus 1336 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1402 (1613)
|++.... |.... +.+..+..+|++ ++++|.|++.+.+.+++.+.+|++.|.+ .+++
T Consensus 61 i~L~~~~~v~~~~--~~~~~~~F~i~~--------~~r~~~l~a~s~~e~~~Wi~al~~~i~~-~~~~ 117 (126)
T 1fao_A 61 LDLTECSAVQFDY--SQERVNCFCLVF--------PFRTFYLCAKTGVEADEWIKILRWKLSQ-IRKQ 117 (126)
T ss_dssp EEGGGCCEEEEEC--SSSSSSEEEEEE--------TTEEEEEECSSHHHHHHHHHHHHHHHHT-C---
T ss_pred EEccceEEEEecc--cCCCCCEEEEEe--------CCcEEEEECCCHHHHHHHHHHHHHHHHH-HHhc
Confidence 5555444 33321 233445677764 4689999999999999999999999987 4443
No 397
>1wh3_A 59 kDa 2'-5'-oligoadenylate synthetase like protein; P59 OASL, ubiquitin family, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=22.96 E-value=1.1e+02 Score=27.72 Aligned_cols=45 Identities=9% Similarity=0.033 Sum_probs=38.4
Q ss_pred CceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccceee
Q psy8107 274 DKSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFVR 318 (1613)
Q Consensus 274 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~~ 318 (1613)
+-.+.|..++++...+-+.+++||+|+-...++..++.|..--|.
T Consensus 7 ~m~i~Vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~gi~~~~qrL~ 51 (87)
T 1wh3_A 7 GIQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPKKQQQLE 51 (87)
T ss_dssp SEEEEEEETTTEEEEEEECSSSBHHHHHHHHHHHTCCCTTTEEEE
T ss_pred CEEEEEEcCCCCEEEEEeCCCChHHHHHHHHHHHhCCChHHEEEE
Confidence 456778888999999999999999999999999999988765443
No 398
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=22.96 E-value=3.4e+02 Score=33.49 Aligned_cols=44 Identities=14% Similarity=-0.014 Sum_probs=34.2
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHhhhhcchhhhhhhhhhhhc
Q psy8107 1160 IVFTQAIVELPGAPFWSIIFFMMLLSLGLGSQIGILEGVLCTIFDI 1205 (1613)
Q Consensus 1160 i~lP~af~~mp~g~l~avLFFl~L~lagltS~isllE~iVt~l~D~ 1205 (1613)
.++|.....+| .....+++..++-+.++|.-+.+....+.+.+.
T Consensus 308 ~~~p~l~~~lp--~~l~Gl~~a~llAA~mST~ss~l~s~st~~~~D 351 (530)
T 3dh4_A 308 KAYPWLTQFLP--VGVKGVVFAALAAAIVSSLASMLNSTATIFTMD 351 (530)
T ss_dssp GHHHHHHTTCC--TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHcc--hhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhH
Confidence 35676665454 678888888999999999999998888887654
No 399
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=22.94 E-value=1.1e+02 Score=33.16 Aligned_cols=55 Identities=13% Similarity=0.355 Sum_probs=38.8
Q ss_pred eecceEEEecCCc--CCCCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHHH
Q psy8107 1336 VPVTEVQVRASSA--KDMDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIRE 1397 (1613)
Q Consensus 1336 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1397 (1613)
|++....+..... .+....+.++|++- ..++|.|++.+.+.++..+++|++.|++
T Consensus 153 I~L~~~~~v~~~~~~~~~~k~~~F~I~t~-------~~r~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 153 FAIDGYDVRMNNTLRKDGKKDCCFEICAP-------DKRIYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp EECTTCEEEECGGGCSSTTGGGEEEEECS-------SSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred EEeCCcEEEEcCCccccCCCCCEEEEEcC-------CCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 6666555554322 23333567777651 2479999999999999999999998874
No 400
>3n3k_B Ubiquitin; hydrolase, protease, thiol protease, DUB, zinc ribbon, inhibitor, ubiqu acetylation, cytoplasm, isopeptide bond, nucleus; 2.60A {Homo sapiens} SCOP: d.15.1.1
Probab=21.67 E-value=63 Score=29.20 Aligned_cols=40 Identities=15% Similarity=0.160 Sum_probs=35.7
Q ss_pred eEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccc
Q psy8107 276 SVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEH 315 (1613)
Q Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~ 315 (1613)
.+.|..++++...+.+.+.+||.|+-..+|+..++.|..-
T Consensus 5 ~i~vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~~ip~~~q 44 (85)
T 3n3k_B 5 RIVVKTLMGRTIILEVEPSDTIENVKAKIQDKEGIPPDQQ 44 (85)
T ss_dssp EEEEECGGGCEEEEECCTTCBHHHHHHHHHHHHCCCGGGE
T ss_pred EEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHHCCCHHHE
Confidence 5678888999999999999999999999999999988654
No 401
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.40 E-value=1.2e+02 Score=29.14 Aligned_cols=54 Identities=17% Similarity=0.377 Sum_probs=36.9
Q ss_pred eecceEEEecCCc-CCCCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHH
Q psy8107 1336 VPVTEVQVRASSA-KDMDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIR 1396 (1613)
Q Consensus 1336 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1396 (1613)
|++....|..... ......+..+|+|. .+++|.|++.+.+.+++-+++|++.++
T Consensus 66 i~L~~~~v~~~~~~~~~~~~~~F~i~~~-------~~r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 66 IPLLSFRVAAVQPSDNISRKHTFKAEHA-------GVRTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp EESTTCCCEECCTTCSCSSSSEEEEECS-------SSCEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred EEcCCCEEEEcCccccCCcccEEEEecC-------CCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 5555544443322 22344567777652 468999999999999999999998764
No 402
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=21.34 E-value=87 Score=29.16 Aligned_cols=51 Identities=20% Similarity=0.259 Sum_probs=35.2
Q ss_pred eecceEEEecCCcCCCCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHHH
Q psy8107 1336 VPVTEVQVRASSAKDMDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIRE 1397 (1613)
Q Consensus 1336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1397 (1613)
|++....|..... + .+..++++ ..+++|.|+..+.+.++.-+++|++.+.+
T Consensus 44 i~L~~~~v~~~~~---~-~~~F~i~~-------~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 94 (103)
T 3rcp_A 44 IKMAVCEIKVHSA---D-NTRMELII-------PGEQHFYMKAVNAAERQRWLVALGSSKAS 94 (103)
T ss_dssp EEGGGCEEECCTT---C-SSEEEEEE-------TTTEEEEEECSSHHHHHHHHHHHHTTSCC
T ss_pred EEeeeeEEEEcCC---C-CceEEEEe-------CCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 5665555554322 2 34556654 23679999999999999999999876544
No 403
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=20.83 E-value=1.6e+02 Score=33.29 Aligned_cols=48 Identities=15% Similarity=0.090 Sum_probs=33.0
Q ss_pred eEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccceeeeeeec
Q psy8107 276 SVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFVRVKKRR 323 (1613)
Q Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~~~~~~~ 323 (1613)
-++|.+.||...+|.|-++|||+||+....-+.+........-+-...
T Consensus 10 ivkv~~~d~ss~~l~V~~~mta~ev~~~l~~k~~~~~~~~W~l~E~~~ 57 (256)
T 3hk0_A 10 DVKVFSEDGTSKVVEILADMTARDLCQLLVYKSHSVDDNSWTLVEHHP 57 (256)
T ss_dssp EEEEEETTSCEEEEEECTTCBHHHHHHHHHCCC-------EEEEEEET
T ss_pred EEEEEecCCcEEEEEECCCCCHHHHHHHHHHhcCCCCCCCEEEEEECC
Confidence 679999999999999999999999999877555554444444443333
No 404
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=20.76 E-value=1.1e+02 Score=28.59 Aligned_cols=54 Identities=22% Similarity=0.356 Sum_probs=35.5
Q ss_pred eecceEEEecCCcC----CCCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHH
Q psy8107 1336 VPVTEVQVRASSAK----DMDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIR 1396 (1613)
Q Consensus 1336 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1396 (1613)
|++...+|...... ..+..+..+|++. ..++|.|+..+.+.+++-+.+|++.++
T Consensus 52 i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~-------~~~~~~l~a~s~~e~~~Wi~ai~~~~k 109 (109)
T 2i5f_A 52 IHLRGCVVTSVESNSNGRKSEEENLFEIITA-------DEVHYFLQAATPKERTEWIKAIQMASR 109 (109)
T ss_dssp EECTTCEEEEECC--------CCSEEEEECT-------TCCEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred EECCCCEEEEccCCcccccCCCceEEEEEeC-------CCCEEEEEcCCHHHHHHHHHHHHHHhC
Confidence 56655555432221 1234566777652 346799999999999999999998763
No 405
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=20.65 E-value=1.2e+02 Score=29.32 Aligned_cols=40 Identities=13% Similarity=0.189 Sum_probs=32.1
Q ss_pred CCcceEEEEEeecccccCCccceEEeecCChHHHHHHHHHHHHHHHH
Q psy8107 1351 MDSHFLWELIHLRSQIQRRTEKVYVLSNSTAEFRNAFLKTIRQIIRE 1397 (1613)
Q Consensus 1351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1397 (1613)
..-.+..+|++. ..++|.++..+.|..+.-+++|++.+..
T Consensus 63 ~~r~~~F~l~~~-------~~~~y~f~A~s~ee~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 63 TDRPHAFQVILS-------DRPCLELSAESEAEMAEWMQHLCQAVSK 102 (112)
T ss_dssp SSCTTEEEEEET-------TSCCEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CCCCeEEEEEcC-------CCCEEEEEcCCHHHHHHHHHHHHHHhhc
Confidence 445567888873 3568999999999999999999887754
No 406
>2eke_C Ubiquitin-like protein SMT3; UBC9, SUMO binding motif, SBM, ligase/protein binding complex; 1.90A {Saccharomyces cerevisiae} SCOP: d.15.1.1
Probab=20.39 E-value=1.1e+02 Score=29.93 Aligned_cols=44 Identities=14% Similarity=0.098 Sum_probs=37.3
Q ss_pred ceEEEEcCCCCeEEEEecCCCcHHHHHHhHccccccCCccceeeeee
Q psy8107 275 KSVKVSLPENQYAHVYLKDSMTVEEFLANACSRKNLNPMEHFVRVKK 321 (1613)
Q Consensus 275 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~l~~~~~~~~~~~ 321 (1613)
-.++|.- +|..+.+-|++.+++..+..+.|++.+++|. -+|+.+
T Consensus 32 I~IkV~~-~g~~i~fkIk~tt~l~kL~~ay~ek~gi~~~--~~rF~F 75 (106)
T 2eke_C 32 INLKVSD-GSSEIFFKIKKTTPLRRLMEAFAKRQGKEMD--SLRFLY 75 (106)
T ss_dssp EEEEEEC-SSCEEEEEEETTSCTHHHHHHHHHHHTCCGG--GEEEEE
T ss_pred EEEEEec-CCcEEEEEeCCCCHHHHHHHHHHHHhCCCcc--cEEEEE
Confidence 3667877 8999999999999999999999999999985 444444
Done!