Query psy8109
Match_columns 1011
No_of_seqs 746 out of 4585
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 18:45:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8109.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8109hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 7.2E-58 2.5E-62 529.9 45.0 396 447-911 3-400 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 2.2E-57 7.7E-62 525.7 45.4 393 416-878 6-400 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 7.8E-41 2.7E-45 372.4 33.2 297 555-884 25-330 (337)
4 4g8k_A 2-5A-dependent ribonucl 100.0 1.7E-40 5.9E-45 369.7 33.5 282 257-545 24-323 (337)
5 3utm_A Tankyrase-1; tankyrase, 100.0 1.4E-39 4.8E-44 364.9 32.4 324 212-566 22-350 (351)
6 1wdy_A 2-5A-dependent ribonucl 100.0 3.7E-39 1.3E-43 349.9 29.7 263 617-886 4-284 (285)
7 3utm_A Tankyrase-1; tankyrase, 100.0 1.2E-39 4.1E-44 365.5 26.5 334 510-899 11-350 (351)
8 1wdy_A 2-5A-dependent ribonucl 100.0 3E-38 1E-42 342.6 33.3 266 213-520 4-283 (285)
9 2fo1_E LIN-12 protein; beta-ba 100.0 4.3E-39 1.5E-43 362.7 18.5 305 559-879 41-370 (373)
10 2fo1_E LIN-12 protein; beta-ba 100.0 8.3E-38 2.8E-42 352.1 20.1 303 217-545 40-368 (373)
11 3d9h_A CDNA FLJ77766, highly s 100.0 1E-36 3.4E-41 329.7 22.4 257 616-882 13-281 (285)
12 3ljn_A Hypothetical protein; a 100.0 3E-37 1E-41 347.5 15.8 271 610-904 12-305 (364)
13 3ljn_A Hypothetical protein; a 100.0 4.8E-37 1.6E-41 345.8 17.4 228 642-909 10-265 (364)
14 3d9h_A CDNA FLJ77766, highly s 100.0 7.6E-36 2.6E-40 322.8 25.4 251 257-545 14-275 (285)
15 2xai_A ASB-9, ankyrin repeat a 100.0 3.6E-36 1.2E-40 321.2 22.2 246 617-905 2-255 (261)
16 2xai_A ASB-9, ankyrin repeat a 100.0 8.6E-36 2.9E-40 318.3 23.7 220 213-450 2-222 (261)
17 1yyh_A HN1;, notch 1, ankyrin 100.0 8.9E-36 3E-40 316.7 19.9 241 644-909 2-244 (253)
18 1yyh_A HN1;, notch 1, ankyrin 100.0 2.5E-35 8.6E-40 313.2 19.6 216 659-879 30-247 (253)
19 1k1a_A B-cell lymphoma 3-encod 100.0 7.8E-35 2.7E-39 307.3 20.3 186 720-907 46-235 (241)
20 3b7b_A Euchromatic histone-lys 100.0 3.5E-34 1.2E-38 301.4 25.1 221 644-902 3-224 (237)
21 3aji_A 26S proteasome non-ATPa 100.0 1.5E-34 5E-39 303.0 21.2 227 617-881 5-231 (231)
22 1oy3_D Transcription factor in 100.0 7.8E-35 2.7E-39 315.3 19.4 263 612-900 3-270 (282)
23 3b7b_A Euchromatic histone-lys 100.0 5.8E-34 2E-38 299.7 24.1 194 710-908 3-197 (237)
24 1oy3_D Transcription factor in 100.0 1.1E-34 3.6E-39 314.3 18.6 230 645-909 2-246 (282)
25 4b93_B Ankyrin repeat domain-c 100.0 2.7E-35 9.4E-40 314.3 12.2 224 648-900 7-230 (269)
26 4b93_B Ankyrin repeat domain-c 100.0 6.9E-35 2.4E-39 311.1 15.2 157 750-907 47-204 (269)
27 1k1a_A B-cell lymphoma 3-encod 100.0 4.8E-34 1.6E-38 301.2 21.1 229 646-880 3-241 (241)
28 3aji_A 26S proteasome non-ATPa 100.0 5.4E-33 1.8E-37 291.1 24.2 224 257-515 5-230 (231)
29 3kea_A K1L; tropism, ANK repea 100.0 6E-34 2E-38 307.7 17.2 236 632-885 14-251 (285)
30 3kea_A K1L; tropism, ANK repea 100.0 1.8E-33 6.2E-38 304.0 19.0 218 257-519 30-250 (285)
31 3eu9_A Huntingtin-interacting 100.0 9.3E-33 3.2E-37 291.0 23.7 234 612-882 3-237 (240)
32 3eu9_A Huntingtin-interacting 100.0 5.3E-32 1.8E-36 285.3 28.1 224 210-479 5-231 (240)
33 2dzn_A Probable 26S proteasome 100.0 9.8E-33 3.3E-37 288.4 21.0 215 652-903 2-223 (228)
34 2f8y_A Notch homolog 1, transl 100.0 1.1E-32 3.9E-37 286.8 19.5 216 629-882 2-218 (223)
35 2dzn_A Probable 26S proteasome 100.0 6.4E-32 2.2E-36 282.2 24.3 208 214-432 2-216 (228)
36 1s70_B 130 kDa myosin-binding 100.0 1.7E-32 5.8E-37 299.7 20.6 261 624-898 4-275 (299)
37 2f8y_A Notch homolog 1, transl 100.0 1.6E-32 5.4E-37 285.8 18.1 209 696-909 2-212 (223)
38 1sw6_A Regulatory protein SWI6 100.0 2.4E-34 8.3E-39 317.3 4.5 249 631-899 32-327 (327)
39 1s70_B 130 kDa myosin-binding 100.0 2E-32 6.7E-37 299.2 17.9 269 264-544 4-285 (299)
40 1sw6_A Regulatory protein SWI6 100.0 3.1E-33 1.1E-37 308.5 7.0 273 224-534 29-327 (327)
41 4gpm_A Engineered protein OR26 100.0 4.8E-31 1.7E-35 259.0 17.9 159 722-883 6-164 (169)
42 4gpm_A Engineered protein OR26 100.0 2.7E-30 9.1E-35 253.7 20.8 159 216-388 6-164 (169)
43 2rfa_A Transient receptor pote 100.0 3.8E-30 1.3E-34 269.6 22.5 190 213-415 2-220 (232)
44 1ikn_D Protein (I-kappa-B-alph 100.0 5.8E-32 2E-36 284.1 8.3 217 647-897 3-228 (236)
45 2rfa_A Transient receptor pote 100.0 2.1E-30 7E-35 271.6 20.0 187 720-907 3-216 (232)
46 1ikn_D Protein (I-kappa-B-alph 100.0 9.6E-31 3.3E-35 274.8 12.7 209 210-430 4-225 (236)
47 3hra_A Ankyrin repeat family p 100.0 1.2E-29 4.2E-34 259.2 20.5 188 719-908 4-198 (201)
48 3hra_A Ankyrin repeat family p 100.0 3.7E-29 1.2E-33 255.6 23.8 190 212-415 3-201 (201)
49 2pnn_A Transient receptor pote 100.0 3.7E-30 1.3E-34 276.8 13.8 217 642-892 3-271 (273)
50 2etb_A Transient receptor pote 100.0 1E-29 3.5E-34 270.6 15.6 190 213-415 1-244 (256)
51 2etb_A Transient receptor pote 100.0 4.5E-30 1.5E-34 273.4 12.4 186 719-907 1-240 (256)
52 2pnn_A Transient receptor pote 100.0 2.9E-29 1E-33 269.8 14.7 208 210-426 9-269 (273)
53 3jxi_A Vanilloid receptor-rela 100.0 3E-28 1E-32 260.0 15.3 196 211-415 2-248 (260)
54 3jxi_A Vanilloid receptor-rela 99.9 3.2E-28 1.1E-32 259.7 13.0 185 720-906 5-243 (260)
55 3v30_A DNA-binding protein rfx 99.9 8.6E-28 2.9E-32 238.6 14.0 170 720-891 2-171 (172)
56 2y1l_E Darpin-8.4; hydrolase-i 99.9 8.7E-27 3E-31 230.4 20.4 161 209-383 9-169 (169)
57 2aja_A Ankyrin repeat family p 99.9 1.1E-29 3.7E-34 281.9 -1.0 278 214-543 65-369 (376)
58 4hbd_A KN motif and ankyrin re 99.9 1.2E-27 4E-32 256.9 14.2 186 720-908 76-270 (276)
59 2aja_A Ankyrin repeat family p 99.9 6E-30 2.1E-34 284.0 -5.3 272 588-908 67-369 (376)
60 2rfm_A Putative ankyrin repeat 99.9 3.1E-27 1.1E-31 239.2 14.1 159 748-907 28-186 (192)
61 1ihb_A P18-INK4C(INK6), cyclin 99.9 3.9E-27 1.3E-31 231.3 14.3 157 720-880 5-162 (162)
62 3v31_A Ankyrin repeat family A 99.9 5.4E-27 1.8E-31 231.5 15.0 159 720-881 3-161 (167)
63 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.2E-26 4.3E-31 229.3 17.3 156 720-878 14-169 (169)
64 4hbd_A KN motif and ankyrin re 99.9 3E-27 1E-31 253.7 13.8 189 214-416 76-274 (276)
65 2rfm_A Putative ankyrin repeat 99.9 1.1E-26 3.8E-31 235.1 17.2 160 210-383 31-190 (192)
66 2vge_A RELA-associated inhibit 99.9 1.5E-29 5.3E-34 262.9 -4.1 200 702-906 2-206 (229)
67 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.3E-26 4.6E-31 227.5 17.1 158 213-385 4-162 (162)
68 3v31_A Ankyrin repeat family A 99.9 2.2E-26 7.5E-31 227.1 18.1 159 213-385 2-160 (167)
69 3v30_A DNA-binding protein rfx 99.9 1.5E-26 5.2E-31 229.5 16.3 160 215-388 3-163 (172)
70 3f6q_A Integrin-linked protein 99.9 8.2E-27 2.8E-31 233.1 13.5 167 720-888 5-171 (179)
71 1awc_B Protein (GA binding pro 99.9 1.8E-26 6.2E-31 224.0 14.5 151 755-907 2-152 (153)
72 1awc_B Protein (GA binding pro 99.9 1.2E-25 4E-30 218.2 18.6 151 214-379 2-152 (153)
73 3twr_A Tankyrase-2; ankyrin re 99.9 2.1E-26 7E-31 226.8 11.8 157 720-879 8-164 (165)
74 2vge_A RELA-associated inhibit 99.9 3.3E-28 1.1E-32 252.8 -2.5 197 669-874 2-207 (229)
75 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.1E-25 3.6E-30 219.4 15.1 152 721-876 3-154 (156)
76 3f6q_A Integrin-linked protein 99.9 1.5E-25 5.2E-30 223.8 16.5 164 212-389 3-167 (179)
77 3twr_A Tankyrase-2; ankyrin re 99.9 1.2E-25 4E-30 221.4 15.2 159 211-384 5-164 (165)
78 1bd8_A P19INK4D CDK4/6 inhibit 99.9 8.8E-25 3E-29 212.9 18.4 153 214-382 2-155 (156)
79 1d9s_A Cyclin-dependent kinase 99.9 4.7E-25 1.6E-29 209.1 15.3 134 745-880 2-136 (136)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.6E-26 5.5E-31 242.6 5.0 177 720-900 5-193 (239)
81 1ycs_B 53BP2, P53BP2; ankyrin 99.9 8.5E-26 2.9E-30 237.1 8.5 178 212-404 3-193 (239)
82 1bi7_B P16INK4A, MTS1, multipl 99.9 5.6E-25 1.9E-29 214.1 13.5 145 749-895 6-151 (156)
83 3t8k_A Uncharacterized protein 99.9 1.6E-24 5.3E-29 216.5 6.6 153 721-878 7-177 (186)
84 1d9s_A Cyclin-dependent kinase 99.9 1.8E-23 6.3E-28 198.1 12.8 125 257-385 11-136 (136)
85 3t8k_A Uncharacterized protein 99.9 2.9E-24 1E-28 214.5 6.7 153 755-910 6-176 (186)
86 1bi7_B P16INK4A, MTS1, multipl 99.9 3.3E-23 1.1E-27 201.6 11.3 140 211-365 9-149 (156)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 8.8E-23 3E-27 190.6 12.6 126 754-880 1-126 (126)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 8.1E-23 2.8E-27 193.6 11.9 126 752-878 11-136 (136)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.2E-21 4.1E-26 182.8 16.0 126 257-385 1-126 (126)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 7.4E-22 2.5E-26 187.0 14.7 124 257-383 13-136 (136)
91 3c5r_A BARD-1, BRCA1-associate 99.9 8.1E-23 2.8E-27 194.0 6.0 121 784-905 6-126 (137)
92 3c5r_A BARD-1, BRCA1-associate 99.9 2.9E-22 9.8E-27 190.2 8.3 134 745-880 1-134 (137)
93 2b0o_E UPLC1; arfgap, structur 99.8 2.5E-21 8.5E-26 209.4 10.0 140 755-901 151-299 (301)
94 3aaa_C Myotrophin, protein V-1 99.8 2.7E-21 9.3E-26 179.5 7.8 111 788-899 7-117 (123)
95 3ehr_A Osteoclast-stimulating 99.8 1.1E-21 3.6E-26 203.4 5.5 137 751-888 69-206 (222)
96 3deo_A Signal recognition part 99.8 1E-20 3.5E-25 189.3 12.2 140 212-382 42-181 (183)
97 3deo_A Signal recognition part 99.8 1.2E-20 4.3E-25 188.7 12.7 138 257-414 43-181 (183)
98 2b0o_E UPLC1; arfgap, structur 99.8 3.9E-20 1.3E-24 200.0 16.8 141 258-405 151-299 (301)
99 3ui2_A Signal recognition part 99.8 1.7E-20 5.7E-25 197.0 13.4 138 257-414 44-182 (244)
100 3ui2_A Signal recognition part 99.8 1.1E-20 3.8E-25 198.4 11.9 143 212-385 43-185 (244)
101 3aaa_C Myotrophin, protein V-1 99.8 5.3E-21 1.8E-25 177.5 8.1 117 752-869 4-120 (123)
102 1dcq_A PYK2-associated protein 99.8 2.3E-19 7.8E-24 191.7 15.5 126 755-881 130-264 (278)
103 3ehr_A Osteoclast-stimulating 99.8 7.5E-20 2.6E-24 189.5 9.9 134 211-358 70-204 (222)
104 1dcq_A PYK2-associated protein 99.8 2.5E-19 8.5E-24 191.4 14.0 174 210-385 62-263 (278)
105 3lvq_E ARF-GAP with SH3 domain 99.8 1.5E-19 5.1E-24 210.7 13.0 128 756-884 133-269 (497)
106 3jue_A Arfgap with coiled-coil 99.8 1.5E-19 5.3E-24 199.5 11.5 146 751-897 195-346 (368)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.4E-19 1.2E-23 155.9 9.2 92 788-880 2-93 (93)
108 3lvq_E ARF-GAP with SH3 domain 99.8 9.9E-19 3.4E-23 203.7 15.6 137 258-401 132-276 (497)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.5E-18 8.5E-23 150.4 12.3 92 292-385 2-93 (93)
110 3jue_A Arfgap with coiled-coil 99.8 2.1E-18 7.1E-23 190.5 14.4 144 213-368 198-345 (368)
111 2l6b_A NR1C; ankyrin, consensu 99.8 5.9E-19 2E-23 161.5 6.2 106 785-891 6-111 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.7 1.8E-18 6.1E-23 158.2 7.8 109 750-859 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.6 1.1E-15 3.7E-20 138.1 10.0 90 818-907 20-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.6 4.2E-15 1.4E-19 134.2 10.6 86 292-379 24-109 (110)
115 4g26_A Pentatricopeptide repea 37.2 26 0.00089 39.6 4.7 29 216-244 31-63 (501)
116 3mkq_B Coatomer subunit alpha; 33.9 1.1E+02 0.0036 28.7 7.5 134 257-415 7-141 (177)
117 3mkq_B Coatomer subunit alpha; 27.0 1.5E+02 0.0051 27.7 7.2 133 213-382 7-140 (177)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.2e-58 Score=529.88 Aligned_cols=396 Identities=28% Similarity=0.365 Sum_probs=304.4
Q ss_pred cCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCC
Q psy8109 447 AGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFT 525 (1011)
Q Consensus 447 ~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t 525 (1011)
.|++++..+..|.||||+|+..|+.++|++|++ +.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.|
T Consensus 3 ~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t 82 (437)
T 1n11_A 3 PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQT 82 (437)
T ss_dssp ------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCC
T ss_pred CCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCC
Confidence 567777777777777777777777777777777 6677777777777777777777777777777777777777777777
Q ss_pred HHHHHHHhCCHHHHHHHHhc-cCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccCCCCHHHHHHHcCChhhHHH
Q psy8109 526 CLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITY 604 (1011)
Q Consensus 526 ~L~~A~~~g~~~iv~~Ll~~-~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~ 604 (1011)
|||+|+..|+.+++++|+++ ++++..+..|.|||++|+..|+.+++++|++.+++.
T Consensus 83 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~----------------------- 139 (437)
T 1n11_A 83 PLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQ----------------------- 139 (437)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-----------------------
T ss_pred HHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-----------------------
Confidence 77777777777777777666 555566666666666666666666666666655432
Q ss_pred HHhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCC
Q psy8109 605 AMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGT 684 (1011)
Q Consensus 605 Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~ 684 (1011)
+..+..|.||||.|+..|+.+++++|++ .|++++..+..|.|||++|+..|+.+++++|+++|++++
T Consensus 140 -------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----- 206 (437)
T 1n11_A 140 -------ACMTKKGFTPLHVAAKYGKVRVAELLLE-RDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH----- 206 (437)
T ss_dssp -------CCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSC-----
T ss_pred -------cCCCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-----
Confidence 2233456666666666666666666666 566666666666666666666666666666666555443
Q ss_pred CcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHh
Q psy8109 685 YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAF 764 (1011)
Q Consensus 685 ~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~ 764 (1011)
..+.. |.||||+|+..|+ .+++++|++. |++++..+..|.||||+|+.
T Consensus 207 ----------------------------~~~~~--g~t~L~~A~~~~~-~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 254 (437)
T 1n11_A 207 ----------------------------SPAWN--GYTPLHIAAKQNQ-VEVARSLLQY-GGSANAESVQGVTPLHLAAQ 254 (437)
T ss_dssp ----------------------------CCCTT--CCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTCCCHHHHHHH
T ss_pred ----------------------------CcCCC--CCCHHHHHHHcCC-HHHHHHHHHc-CCCCCCCCCCCCCHHHHHHH
Confidence 33333 7889999999998 8999999988 88899889999999999999
Q ss_pred CCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhc
Q psy8109 765 GNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKY 844 (1011)
Q Consensus 765 ~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ 844 (1011)
.|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++. .+..|+||||+|+..|+.++|++|+++
T Consensus 255 ~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 333 (437)
T 1n11_A 255 EGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA-TTRMGYTPLHVASHYGNIKLVKFLLQH 333 (437)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCSSCCCHHHHHHHSSCSHHHHHHHHT
T ss_pred CCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCC-CCCCCCCHHHHHHHcCcHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999987 778899999999999999999999999
Q ss_pred cCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHhhhcc
Q psy8109 845 NADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANIYV 911 (1011)
Q Consensus 845 ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ 911 (1011)
|+++|.+|..|+||||+|+..|+.++|++|+++|++++..|.+|.||+++|.+.|+.++++.+....
T Consensus 334 gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~ 400 (437)
T 1n11_A 334 QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT 400 (437)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999999888776543
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.2e-57 Score=525.74 Aligned_cols=393 Identities=27% Similarity=0.349 Sum_probs=358.1
Q ss_pred CccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHH
Q psy8109 416 NINHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPI 494 (1011)
Q Consensus 416 ~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L 494 (1011)
+++..+..|.||||+|+.. ++.+++++|++.|++++..+..|.||||+|+..|+.+++++|++ +.+++..+..|.|||
T Consensus 6 ~~~~~~~~g~t~L~~Aa~~-g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L 84 (437)
T 1n11_A 6 SGGGGGESGLTPLHVASFM-GHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPL 84 (437)
T ss_dssp ---------CCHHHHHHHH-TCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHH
T ss_pred CccccCCCCCCHHHHHHHC-CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHH
Confidence 5677889999999995543 39999999999999999999999999999999999999999999 889999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhc-cCCCCCCCCCCCHHHHHHhcCCHHHHHH
Q psy8109 495 YFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH-IGVNLQDNKGCTPLHCAIVGNQLEVFNH 573 (1011)
Q Consensus 495 ~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~-~~~~~~~~~g~t~L~~A~~~g~~eiv~~ 573 (1011)
++|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++ ...+..+..|.|||+.|+..|+.+++++
T Consensus 85 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 164 (437)
T 1n11_A 85 HCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAEL 164 (437)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999998 7777888899999999999999999999
Q ss_pred HHhCCCCccccCCCCHHHHHHHcCChhhHHHHHhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCC
Q psy8109 574 LINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGS 653 (1011)
Q Consensus 574 Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~ 653 (1011)
|++.|+++ +..+..|.||||.|+..|+.+++++|++ .|.+++..+..|.
T Consensus 165 Ll~~g~~~------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~ 213 (437)
T 1n11_A 165 LLERDAHP------------------------------NAAGKNGLTPLHVAVHHNNLDIVKLLLP-RGGSPHSPAWNGY 213 (437)
T ss_dssp HHHTTCCT------------------------------TCCCSSCCCHHHHHHHTTCHHHHHHHGG-GTCCSCCCCTTCC
T ss_pred HHhCCCCC------------------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCcCCCCC
Confidence 99988765 4456779999999999999999999999 8999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCH
Q psy8109 654 TALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDC 733 (1011)
Q Consensus 654 t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~ 733 (1011)
||||+|+..|+.+++++|++.|++++..+. . |.||||+|+..|+
T Consensus 214 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~---------------------------------~--g~t~L~~A~~~g~- 257 (437)
T 1n11_A 214 TPLHIAAKQNQVEVARSLLQYGGSANAESV---------------------------------Q--GVTPLHLAAQEGH- 257 (437)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCT---------------------------------T--CCCHHHHHHHTTC-
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCC---------------------------------C--CCCHHHHHHHCCC-
Confidence 999999999999999999998887764332 2 7889999999998
Q ss_pred HHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCC
Q psy8109 734 NDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD 813 (1011)
Q Consensus 734 ~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~ 813 (1011)
.+++++|++. +++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++|++|+++|++
T Consensus 258 ~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad 336 (437)
T 1n11_A 258 AEMVALLLSK-QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD 336 (437)
T ss_dssp HHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCC
T ss_pred HHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCC
Confidence 8999999988 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy8109 814 TNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAG 878 (1011)
Q Consensus 814 ~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~g 878 (1011)
++. .+..|+||||+|+..|+.++|++|+++|++++.+|..|+|||++|++.|+.+++++|....
T Consensus 337 ~n~-~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~ 400 (437)
T 1n11_A 337 VNA-KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT 400 (437)
T ss_dssp TTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred CCC-CCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcc
Confidence 997 7889999999999999999999999999999999999999999999999999999998654
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=7.8e-41 Score=372.45 Aligned_cols=297 Identities=24% Similarity=0.301 Sum_probs=220.6
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhCCCCccccC---CCCHHHHHHHcCChhhHHHHHh-hccccccCCCCCcHHHHHHHcCC
Q psy8109 555 GCTPLHCAIVGNQLEVFNHLINSNADITMYK---NDSPLHLACATGNMDMITYAMK-YFDVNIENDIGETPLHVAVSHGC 630 (1011)
Q Consensus 555 g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~---~~t~l~~A~~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~ 630 (1011)
|.|+|+.|+..|++++|++|+++|++++..+ +.||||+|+..|+.++|++|++ +++++..+..+.++++.++..+.
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 104 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGS 104 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhccc
Confidence 4567777777777777777777777765432 3355555555555555555555 45555555555555555555555
Q ss_pred HHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCC
Q psy8109 631 LEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGAD 710 (1011)
Q Consensus 631 ~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~ 710 (1011)
..++..++. .+.+++..+..|.|||++|+..|+.+++++|+++|++++....... +
T Consensus 105 ~~~~~~~~~-~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~-----------------------~ 160 (337)
T 4g8k_A 105 VKLLKLFLS-KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE-----------------------D 160 (337)
T ss_dssp HHHHHHHHT-TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-------------------------
T ss_pred chhhHHhhh-ccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcccc-----------------------c
Confidence 555555555 4555555555555555555555555555555555555543332100 0
Q ss_pred CCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCC----HHHHHHHHHCCCCCCCCCc
Q psy8109 711 VNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN----LDLLKFLLKAGADPDILDL 786 (1011)
Q Consensus 711 ~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~----~~iv~~Ll~~gad~~~~d~ 786 (1011)
....+. .|.||||+|+..|+ .+++++|+++.|++++..+..|.|+|+.++..++ ..++++|+++|++++.++.
T Consensus 161 ~~~~~~--~g~T~L~~A~~~g~-~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~ 237 (337)
T 4g8k_A 161 QERLRK--GGATALMDAAEKGH-VEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE 237 (337)
T ss_dssp ---CTT--CSCCHHHHHHHHTC-HHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCG
T ss_pred cccccC--CCCcHHHHHHHCCC-HHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCC
Confidence 011122 38999999999999 9999999988799999999999999998876543 4688999999999999999
Q ss_pred CCCCcccccccCChHHHHHHHHHc-CCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHc
Q psy8109 787 KDTSPLLSSCRQGLYEIVDTLLEY-NADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQA 865 (1011)
Q Consensus 787 ~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~ 865 (1011)
.|.||||+|+..|+.++|++|++. |++++. .+..|+||||+|+..|+.++|++|+++|+++|.+ +|||+|+..
T Consensus 238 ~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~-~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~ 311 (337)
T 4g8k_A 238 RGKTPLILAVEKKHLGLVQRLLEQEHIEIND-TDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRN 311 (337)
T ss_dssp GGCCHHHHHHHTTCHHHHHHHHTSTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHT
T ss_pred CCCCHHHHHHHhhhhHHHHHHHHhcCCcccC-cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHc
Confidence 999999999999999999999985 899998 8889999999999999999999999999998764 599999999
Q ss_pred CCHHHHHHHHhcCCCcccc
Q psy8109 866 KNWDIVTFLLDAGSNIEKA 884 (1011)
Q Consensus 866 g~~~iv~~Ll~~ga~~~~~ 884 (1011)
|+.++|++|+++||++|..
T Consensus 312 ~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 312 YDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp TCHHHHHHHHHTTCCC---
T ss_pred CCHHHHHHHHHCcCCCCCC
Confidence 9999999999999999853
No 4
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.7e-40 Score=369.67 Aligned_cols=282 Identities=30% Similarity=0.414 Sum_probs=248.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q psy8109 257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR 336 (1011)
Q Consensus 257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~ 336 (1011)
.|.|||+.|+..|++++|++||++|++++..+...|+||||+|+..|+.++|++|+++|+ +++..+..+.++++.++.
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga--~~~~~~~~~~~~~~~~~~ 101 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA--DPVLRKKNGATPFILAAI 101 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCC--chhhhccCCCchhHHHHh
Confidence 567999999999999999999999999998887669999999999999999999999999 789999999999999999
Q ss_pred cCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCC-----------CCCCcHHHHHHhcCCH
Q psy8109 337 RKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-----------EGERTALHMASQFGNL 405 (1011)
Q Consensus 337 ~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-----------~~~~t~L~~Aa~~g~~ 405 (1011)
.++..++..+++.+++++..+..|.|||++|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~ 181 (337)
T 4g8k_A 102 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 181 (337)
T ss_dssp HTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCH
T ss_pred cccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCH
Confidence 99999999999999999999999999999999999999999999999998753 2468999999999999
Q ss_pred HHHHHHHhc-c-CccCCCCCCCcHhHHHH-hc--CCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-
Q psy8109 406 EMVNYLLKH-I-NINHQDKDGWTPLTCSI-KG--QASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK- 479 (1011)
Q Consensus 406 ~iv~~Ll~~-~-~~~~~~~~~~t~l~~a~-~~--~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~- 479 (1011)
++|++|+++ + +++..+..|.|+++.+. .+ .....++++|+++|++++.++..|.||||+|+..|+.+++++|++
T Consensus 182 ~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~ 261 (337)
T 4g8k_A 182 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ 261 (337)
T ss_dssp HHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTS
T ss_pred HHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHh
Confidence 999999975 4 88889999999998733 22 123468889999999999999999999999999999999999987
Q ss_pred -ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhc
Q psy8109 480 -HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545 (1011)
Q Consensus 480 -~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ 545 (1011)
+.+++..+..|+||||+|+..|+.++|++|+++|++++. .+||++|+..|+.++|++|+++
T Consensus 262 ~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~-----~~~L~~A~~~~~~~iv~~Ll~~ 323 (337)
T 4g8k_A 262 EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC-----GDLVMTARRNYDHSLVKVLLSH 323 (337)
T ss_dssp TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT-----CCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----CCHHHHHHHcCCHHHHHHHHHC
Confidence 678888999999999999999999999999999988753 2466666666665555555555
No 5
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.4e-39 Score=364.88 Aligned_cols=324 Identities=25% Similarity=0.271 Sum_probs=271.5
Q ss_pred CCcchHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q psy8109 212 SQGYKALCWALQEKKTDIAKLLVDK-GVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKS 290 (1011)
Q Consensus 212 ~~g~t~L~~Aa~~G~~~iv~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~ 290 (1011)
..+.++|+.||..|+.+.|+.|+.. |++++..+. .|.||||.|+..|+.++|++|+++|++++..+..
T Consensus 22 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~-----------~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 90 (351)
T 3utm_A 22 EYKKDELLEAARSGNEEKLMALLTPLNVNCHASDG-----------RKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKG 90 (351)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSST-----------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred cccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCC-----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC
Confidence 4567999999999999999988875 778777776 8999999999999999999999999999888776
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHc
Q psy8109 291 RNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQ 370 (1011)
Q Consensus 291 ~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~ 370 (1011)
|.||||+|+..|+.++|++|+++|+ +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.+|+++|+..
T Consensus 91 -g~t~L~~A~~~g~~~iv~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~ 167 (351)
T 3utm_A 91 -GLVPLHNACSYGHYEVTELLLKHGA--CVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTP 167 (351)
T ss_dssp -CCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSH
T ss_pred -CCcHHHHHHHCCCHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhh
Confidence 9999999999999999999999999 7899999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcc-CccCCCCCCCcHhHHHHhcC--CCHHHHHHHHHc
Q psy8109 371 NCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHI-NINHQDKDGWTPLTCSIKGQ--ASLEVFHSIIEA 447 (1011)
Q Consensus 371 g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~~-~~~~~~~~~~t~l~~a~~~~--~~~~i~~~Ll~~ 447 (1011)
+..+.+.+.... .++..++..++.+.+..++... .....+..+.||||+++... ...+++++|++.
T Consensus 168 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~ 236 (351)
T 3utm_A 168 ELRERLTYEFKG-----------HSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRK 236 (351)
T ss_dssp HHHHHHHHHHHH-----------HHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHT
T ss_pred hhHHHHHhhhcc-----------cHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHc
Confidence 988888887753 5788899999999999998876 33445677889999866542 358899999999
Q ss_pred CCCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCH
Q psy8109 448 GADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTC 526 (1011)
Q Consensus 448 g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~ 526 (1011)
|++++..+..|.||||+|+..|+.+++++|++ +++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||
T Consensus 237 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~ta 316 (351)
T 3utm_A 237 GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTA 316 (351)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCh
Confidence 99999888899999999999999999999998 78888888899999999999999999999999999999888889998
Q ss_pred HHHHHHhCCHHHHHHHHhccCCCCCCCCCCCHHHHHHhcC
Q psy8109 527 LHVACEFASIEMVSFLLSHIGVNLQDNKGCTPLHCAIVGN 566 (1011)
Q Consensus 527 L~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g 566 (1011)
+++| ..+++++|.+... .....+.+++..|+..|
T Consensus 317 l~~a----~~~~~~~l~~~~~--~~~~~~~~~l~~A~~~g 350 (351)
T 3utm_A 317 AQMG----NEAVQQILSESTP--MRTSDVDYRLLEASKAG 350 (351)
T ss_dssp HHHS----CHHHHHHHHHC---------------------
T ss_pred hhhh----hHHHHHHHHhccc--cccCcceeehhhhhccC
Confidence 8886 6678888877622 22344556777777665
No 6
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.7e-39 Score=349.85 Aligned_cols=263 Identities=29% Similarity=0.327 Sum_probs=239.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCCCcccC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-CCcHHHHHHHc
Q psy8109 617 IGETPLHVAVSHGCLEAVKFLLNTKNIDVNHK-TKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALMK 694 (1011)
Q Consensus 617 ~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~L~~aa~~ 694 (1011)
.|.|+|+.|+..|+.+++++|++ .|++++.. +..|.||||+|+..|+.+++++|+++|++++..+. +.|||+.|+.
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~- 81 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLE-GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAI- 81 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH-
T ss_pred ccchHHHHHHHcCCHHHHHHHHH-cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH-
Confidence 36788888888888888888888 78888877 77788888888888888888888888888887766 8888888888
Q ss_pred CCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccc----------cCCCccHHHHHHh
Q psy8109 695 DPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLR----------NFNNRTALNFAAF 764 (1011)
Q Consensus 695 ~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~----------~~~g~t~L~~Aa~ 764 (1011)
.|+.+++++|+++|++++..+.. |.||||+|+..|+ .+++++|++. |++++.. +..|.||||.|+.
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~-~~~~~~Ll~~-g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 157 (285)
T 1wdy_A 82 AGSVKLLKLFLSKGADVNECDFY--GFTAFMEAAVYGK-VKALKFLYKR-GANVNLRRKTKEDQERLRKGGATALMDAAE 157 (285)
T ss_dssp HTCHHHHHHHHHTTCCTTCBCTT--CCBHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCccCcc--cCCHHHHHHHhCC-HHHHHHHHHh-CCCcccccccHHHHHhhccCCCcHHHHHHH
Confidence 78888889988888888877776 8999999999999 8999999988 8888876 7789999999999
Q ss_pred CCCHHHHHHHHHC-CCCCCCCCcCCCCcccccccCCh----HHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHH
Q psy8109 765 GNNLDLLKFLLKA-GADPDILDLKDTSPLLSSCRQGL----YEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIK 839 (1011)
Q Consensus 765 ~g~~~iv~~Ll~~-gad~~~~d~~g~t~L~~A~~~g~----~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~ 839 (1011)
.|+.+++++|++. |++++..+..|.||||+|+..++ .+++++|+++|++++. .+..|.||||+|+..|+.++++
T Consensus 158 ~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~ 236 (285)
T 1wdy_A 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV-RGERGKTPLILAVEKKHLGLVQ 236 (285)
T ss_dssp HTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSC-CCTTSCCHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHcCCHHHHH
Confidence 9999999999998 99999999999999999999998 9999999999999997 7889999999999999999999
Q ss_pred HHHh-ccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccc
Q psy8109 840 LLLK-YNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATK 886 (1011)
Q Consensus 840 ~Ll~-~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~ 886 (1011)
+|++ .|++++.+|..|+||||+|+..|+.+++++|+++||+++..|.
T Consensus 237 ~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 237 RLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp HHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred HHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence 9998 8999999999999999999999999999999999999998763
No 7
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.2e-39 Score=365.46 Aligned_cols=334 Identities=22% Similarity=0.180 Sum_probs=244.6
Q ss_pred HhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhc--cCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccCCC
Q psy8109 510 LKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH--IGVNLQDNKGCTPLHCAIVGNQLEVFNHLINSNADITMYKND 587 (1011)
Q Consensus 510 l~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~--~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~ 587 (1011)
.+.+++....+..+.++|+.|+..|+.+.++.|+.. .+++..+..|.||||+|+..|+.+++++|++.|+++
T Consensus 11 ~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------ 84 (351)
T 3utm_A 11 ADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV------ 84 (351)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT------
T ss_pred cCCceeeeeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------
Confidence 344444455556667788888888888887777765 556667777888888888888888888888877764
Q ss_pred CHHHHHHHcCChhhHHHHHhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHH
Q psy8109 588 SPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDL 667 (1011)
Q Consensus 588 t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~i 667 (1011)
+..+..|.||||+|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.++
T Consensus 85 ------------------------~~~~~~g~t~L~~A~~~g~~~iv~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~ 139 (351)
T 3utm_A 85 ------------------------HAKDKGGLVPLHNACSYGHYEVTELLLK-HGACVNAMDLWQFTPLHEAASKNRVEV 139 (351)
T ss_dssp ------------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred ------------------------CccCCCCCcHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 3445667788888888888888888887 788888888888888888888888888
Q ss_pred HHHHHHCCCCCcCCCC-CCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCC
Q psy8109 668 VEILLEANADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNA 746 (1011)
Q Consensus 668 v~~Ll~~ga~~~~~~~-~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~ 746 (1011)
+++|+++|++++..+. +.++++.++. .+..+.+.+.. ..+++..++..++ .+.+..++.. +.
T Consensus 140 v~~Ll~~g~~~~~~~~~g~~~l~~a~~-~~~~~~~~~~~--------------~~~~~~~~~~~~~-~~~~~~~l~~-~~ 202 (351)
T 3utm_A 140 CSLLLSHGADPTLVNCHGKSAVDMAPT-PELRERLTYEF--------------KGHSLLQAAREAD-LAKVKKTLAL-EI 202 (351)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHCSS-HHHHHHHHHHH--------------HHHHHHHHHHTTC-HHHHHHHTTT-CC
T ss_pred HHHHHHcCCCCccccCCCCcchHHHhh-hhhHHHHHhhh--------------cccHHHHHHHhcc-HHHHHHHHHh-hc
Confidence 8888888888777666 6777777654 44445555443 2356777777777 6666766666 33
Q ss_pred CcccccCCCccHHHHHHhC---CCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCC
Q psy8109 747 DITLRNFNNRTALNFAAFG---NNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGS 823 (1011)
Q Consensus 747 ~~~~~~~~g~t~L~~Aa~~---g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~ 823 (1011)
.....+..|.||||+|+.. ++.+++++|++.|++++.++..|.||||+|+..|+.++|++|+++|++++. .+..|+
T Consensus 203 ~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~-~d~~g~ 281 (351)
T 3utm_A 203 INFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNA-LDSLGQ 281 (351)
T ss_dssp TTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSC
T ss_pred ccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCC
Confidence 3334567788899999888 557888999999999988888899999999999999999999999988887 778889
Q ss_pred hHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhC
Q psy8109 824 TALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEK 899 (1011)
Q Consensus 824 t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~ 899 (1011)
||||+|+..|+.++|++|+++|++++.+|..|+||+++| +.+++++|.+.+... ...+.+++..|++.|
T Consensus 282 t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~~---~~~~~~~l~~A~~~g 350 (351)
T 3utm_A 282 TALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPMR---TSDVDYRLLEASKAG 350 (351)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC----------------------
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhccccc---cCcceeehhhhhccC
Confidence 999999999999999999999999998898999988887 667888888876532 335567777777665
No 8
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3e-38 Score=342.63 Aligned_cols=266 Identities=30% Similarity=0.411 Sum_probs=187.2
Q ss_pred CcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q psy8109 213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRN 292 (1011)
Q Consensus 213 ~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g 292 (1011)
.|.|+|++|++.|+.++|++|++.|++++.... ..|.||||.|+..|+.++|++|+++|++++..+.. |
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~----------~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g 72 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEE----------EGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN-G 72 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-C
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcccccC----------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-C
Confidence 456777777777777777777777766655421 15667777777777777777777777666655544 6
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccC----------CCCCCc
Q psy8109 293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSG----------NDDGCT 362 (1011)
Q Consensus 293 ~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~----------~~~g~t 362 (1011)
.||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+..|+.+++++|+++|++++.. +..|.|
T Consensus 73 ~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t 150 (285)
T 1wdy_A 73 ATPFLLAAIAGSVKLLKLFLSKGA--DVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGAT 150 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTC--CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC--CCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCc
Confidence 677777777777777777777666 56666666777777777777777777777777666655 444555
Q ss_pred HHHHHHHcCChhHHHHHHhc-CCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhccCccCCCCCCCcHhHHHHhcCCCHHH
Q psy8109 363 PLFCAIAQNCLEVFNYLVNH-GCDLSVP-EGERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEV 440 (1011)
Q Consensus 363 ~L~~A~~~g~~~iv~~Ll~~-g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~i 440 (1011)
||++|+..|+.+++++|++. |++++.. ..+.|||+.|+..|+.+ ...++
T Consensus 151 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~-----------------------------~~~~i 201 (285)
T 1wdy_A 151 ALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDS-----------------------------DVEAI 201 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTT-----------------------------THHHH
T ss_pred HHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccc-----------------------------hHHHH
Confidence 55555555555555555554 5555444 34445555555444410 01566
Q ss_pred HHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh--ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCccccc
Q psy8109 441 FHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK--HIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAV 518 (1011)
Q Consensus 441 ~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~--~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~ 518 (1011)
+++|++.|++++..+..|.||||+|+..|+.+++++|++ +.+++..+..|.|||++|+..|+.+++++|+++|++++.
T Consensus 202 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 202 THLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 281 (285)
T ss_dssp HHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCC
T ss_pred HHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence 677777888888888899999999999999999999997 678888999999999999999999999999999999877
Q ss_pred cc
Q psy8109 519 KM 520 (1011)
Q Consensus 519 ~~ 520 (1011)
.|
T Consensus 282 ~d 283 (285)
T 1wdy_A 282 GD 283 (285)
T ss_dssp SS
T ss_pred cc
Confidence 65
No 9
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=4.3e-39 Score=362.66 Aligned_cols=305 Identities=20% Similarity=0.209 Sum_probs=127.2
Q ss_pred HHHHHhcCCHHHHHHHHhCCCCccccCCCCHHHHHHHcCChhhHHHHHhhccccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy8109 559 LHCAIVGNQLEVFNHLINSNADITMYKNDSPLHLACATGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLL 638 (1011)
Q Consensus 559 L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll 638 (1011)
|..++..|+.+.++.++++..++. ...+++..+...|+++++++++. +..+..|.||||.|+..+. +++++|+
T Consensus 41 l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~g~t~L~~Aa~~~~-~~~~~L~ 113 (373)
T 2fo1_E 41 LLEASYDGYIKRQRNELQHYSLYP--NPQGYGNGNDFLGDFNHTNLQIP----TEPEPESPIKLHTEAAGSY-AITEPIT 113 (373)
T ss_dssp -----------------------------------------------------------CCCHHHHHHHSSS-CCCSCCS
T ss_pred cccccCCccccchhhhhhhhcccc--CccccCCCCCccccccccccccc----cCCCCCCccHHHHHhcCCc-hHHHHhc
Confidence 334444555555555554443332 11223344555566666655543 2345566777777776443 5665554
Q ss_pred hhCCCCcccCC-CCCCcHHHHHHHcCCHHHHHHHH--------HCCCCCcCCCC-CCcHHHHHHHcCCCHHHHHHHHhCC
Q psy8109 639 NTKNIDVNHKT-KDGSTALFFACYDKRLDLVEILL--------EANADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYG 708 (1011)
Q Consensus 639 ~~~g~~~~~~~-~~g~t~L~~A~~~g~~~iv~~Ll--------~~ga~~~~~~~-~~t~L~~aa~~~~~~~iv~~Ll~~g 708 (1011)
. .+++..+ ..|.||||+|+..|+.+++++|+ +.|++++..+. +.||||.|+. .|+.+++++|+++|
T Consensus 114 ~---~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~-~g~~~iv~~Ll~~g 189 (373)
T 2fo1_E 114 R---ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVL-ARRRRLVAYLMKAG 189 (373)
T ss_dssp T---TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHTT
T ss_pred c---ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHH-cChHHHHHHHHHCC
Confidence 3 3455565 56777777777777766666665 33333333332 3333333333 33333333333333
Q ss_pred CCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcC---CCcccccCCCccHHHHHHhCC---CHHHHHHHHHCCCCCC
Q psy8109 709 ADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECN---ADITLRNFNNRTALNFAAFGN---NLDLLKFLLKAGADPD 782 (1011)
Q Consensus 709 ~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g---~~~~~~~~~g~t~L~~Aa~~g---~~~iv~~Ll~~gad~~ 782 (1011)
++++..+.. |.||||+|+..|+ .+++++|++. + ++++..+..|.||||+|+..| +.+++++|+++|++++
T Consensus 190 a~~~~~~~~--g~t~L~~A~~~g~-~~~v~~Ll~~-~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~ 265 (373)
T 2fo1_E 190 ADPTIYNKS--ERSALHQAAANRD-FGMMVYMLNS-TKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVD 265 (373)
T ss_dssp CCSCCCCTT--CCCHHHHHHHTTC-HHHHHHHTTS-HHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSS
T ss_pred CCCcccCCC--CCCHHHHHHHCCC-HHHHHHHHhc-CccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcc
Confidence 333333333 4455555555555 4555555544 2 444445555555555555544 4555555555555544
Q ss_pred C--------CCcCCCCcccccccCChHHHHHHHHHcC-CCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccC
Q psy8109 783 I--------LDLKDTSPLLSSCRQGLYEIVDTLLEYN-ADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDK 853 (1011)
Q Consensus 783 ~--------~d~~g~t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~ 853 (1011)
. .+..|.||||+|+..|+.++|++|+++| ++++. .+..|.||||+|+..|+.++|++|+++|++++.+|.
T Consensus 266 ~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~-~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~ 344 (373)
T 2fo1_E 266 YDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK-QDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDA 344 (373)
T ss_dssp CCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCS
T ss_pred cccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCC
Confidence 3 3334555555555555555555555443 45544 444555555555555555555555555555555555
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy8109 854 YGKIAFHSACQAKNWDIVTFLLDAGS 879 (1011)
Q Consensus 854 ~g~taL~~A~~~g~~~iv~~Ll~~ga 879 (1011)
.|+|||++|+..|+.++|++|+++|+
T Consensus 345 ~g~t~l~~A~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 345 TDHTARQLAQANNHHNIVDIFDRCRP 370 (373)
T ss_dssp SSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 55555555555555555555555544
No 10
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=8.3e-38 Score=352.12 Aligned_cols=303 Identities=23% Similarity=0.305 Sum_probs=184.6
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHH
Q psy8109 217 ALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTAL 296 (1011)
Q Consensus 217 ~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L 296 (1011)
+|..|+..|+.+.++.++++..+++ ...+++..|...|+++++++++....+ ..|.|||
T Consensus 40 ~l~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~g~t~L 98 (373)
T 2fo1_E 40 SLLEASYDGYIKRQRNELQHYSLYP---------------NPQGYGNGNDFLGDFNHTNLQIPTEPE------PESPIKL 98 (373)
T ss_dssp ---------------------------------------------------------------------------CCCHH
T ss_pred ccccccCCccccchhhhhhhhcccc---------------CccccCCCCCccccccccccccccCCC------CCCccHH
Confidence 4555556777777777776554432 112345667777777777777655332 2277788
Q ss_pred HHHHHhCCHHHHHHHHHcCCCCCCcccC-CCCCCHHHHHHhcCcHHHHHHHH--------HCCCCCccCCCCCCcHHHHH
Q psy8109 297 HVAAIVESVDIVKLLFDYGAEKSVNVQN-VAGLTPLHIACRRKCLEIVKILL--------DKGADINSGNDDGCTPLFCA 367 (1011)
Q Consensus 297 ~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~-~~g~t~L~~Aa~~g~~~iv~~Ll--------~~ga~~n~~~~~g~t~L~~A 367 (1011)
|.|+..|+ +++++|+. . +++..+ ..|.||||+||..|+.++|++|+ +.|+++|..|..|.||||+|
T Consensus 99 ~~Aa~~~~-~~~~~L~~--~--~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A 173 (373)
T 2fo1_E 99 HTEAAGSY-AITEPITR--E--SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLA 173 (373)
T ss_dssp HHHHHSSS-CCCSCCST--T--TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHH
T ss_pred HHHhcCCc-hHHHHhcc--c--cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHH
Confidence 88877544 67776653 2 456666 67788888888888777666665 67888888888888888888
Q ss_pred HHcCChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhcc----CccCCCCCCCcHhHHHHhcCC--CHHH
Q psy8109 368 IAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHI----NINHQDKDGWTPLTCSIKGQA--SLEV 440 (1011)
Q Consensus 368 ~~~g~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~----~~~~~~~~~~t~l~~a~~~~~--~~~i 440 (1011)
+..|+.++|++|+++|++++.. ..+.||||+|+..|+.+++++|++++ +++..+..|.||||+|+.... +.++
T Consensus 174 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~ 253 (373)
T 2fo1_E 174 VLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVAS 253 (373)
T ss_dssp HHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHH
T ss_pred HHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHH
Confidence 8888888888888888877766 56678888888888888888888764 566667777777777555433 6777
Q ss_pred HHHHHHcCCCccc--------ccCCCChHHHHHHHcCCHHHHHHHHh--ccCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy8109 441 FHSIIEAGADIKA--------KLMDGTTALHLACYFGNLAMVNYLVK--HIDINSENDLGKTPIYFAIKNNHLEIFNLLL 510 (1011)
Q Consensus 441 ~~~Ll~~g~~~~~--------~~~~g~t~L~~Aa~~g~~~iv~~Ll~--~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll 510 (1011)
+++|++.|++++. .+..|.||||+|+..|+.++|++|++ +.+++..+..|.||||+|+..|+.+++++|+
T Consensus 254 v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll 333 (373)
T 2fo1_E 254 AKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLI 333 (373)
T ss_dssp HHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 7777777777664 44567777777777777777777776 3677777777777777777777777777777
Q ss_pred hcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhc
Q psy8109 511 KLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545 (1011)
Q Consensus 511 ~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ 545 (1011)
++|++++..+..|.|||++|+..|+.+++++|+++
T Consensus 334 ~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~ 368 (373)
T 2fo1_E 334 QQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC 368 (373)
T ss_dssp HTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred HcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 77777777777777777777777777777777665
No 11
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=329.68 Aligned_cols=257 Identities=21% Similarity=0.234 Sum_probs=152.8
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhhC----------CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-C
Q psy8109 616 DIGETPLHVAVSHGCLEAVKFLLNTK----------NIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-T 684 (1011)
Q Consensus 616 ~~g~t~L~~A~~~g~~~iv~~Ll~~~----------g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~ 684 (1011)
..|.|++|+|+..|+.+.+..++... ...++..+..|+||||+|+..|+.+++++|++.|++++..+. +
T Consensus 13 ~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g 92 (285)
T 3d9h_A 13 GLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADH 92 (285)
T ss_dssp -----------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTC
T ss_pred hHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 34566777777776655555443311 112345566677777777777777777777776666665544 5
Q ss_pred CcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHh
Q psy8109 685 YTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAF 764 (1011)
Q Consensus 685 ~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~ 764 (1011)
.||||.|+. .|+.+++++|+++|++++..+.. |.||||+|+..|+ .+++++|++. |++++..+ .|.||||+|+.
T Consensus 93 ~t~L~~A~~-~g~~~~v~~Ll~~ga~~~~~~~~--g~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~~~-~g~t~L~~A~~ 166 (285)
T 3d9h_A 93 VSPLHEACL-GGHLSCVKILLKHGAQVNGVTAD--WHTPLFNACVSGS-WDCVNLLLQH-GASVQPES-DLASPIHEAAR 166 (285)
T ss_dssp CCHHHHHHH-TTCHHHHHHHHHTTCCSSCCCTT--CCCHHHHHHHHTC-HHHHHHHHHT-TCCSSCSC-TTSCHHHHHHH
T ss_pred CCHHHHHHH-CCcHHHHHHHHHCCCCCCCCCCC--CCCHHHHHHHcCH-HHHHHHHHHC-CCCCCCCC-CCCCHHHHHHH
Confidence 555555554 45555555555555555555544 6677777777777 6777777766 66665433 47777777777
Q ss_pred CCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhc
Q psy8109 765 GNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKY 844 (1011)
Q Consensus 765 ~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ 844 (1011)
.|+.+++++|++.|++++..+..|.||||+|+..|+.++|++|+++|++++. +..|.||||+|+..|+.+++++|+++
T Consensus 167 ~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~ 244 (285)
T 3d9h_A 167 RGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ--GKGQDSPLHAVVRTASEELACLLMDF 244 (285)
T ss_dssp HTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC--CBTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 7777777777777777777777777777777777777777777777777763 56677777777777777777777777
Q ss_pred cCCcccccCCCCCHHHHHHHcCCHHHHHHHHhc-CCCcc
Q psy8109 845 NADINAEDKYGKIAFHSACQAKNWDIVTFLLDA-GSNIE 882 (1011)
Q Consensus 845 ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~-ga~~~ 882 (1011)
|++++.+|..|+|||++|+ ++.+++++|+++ |+++.
T Consensus 245 gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~ 281 (285)
T 3d9h_A 245 GADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASLP 281 (285)
T ss_dssp TCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC-----
T ss_pred CCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCC
Confidence 7777777777777777777 345677777775 66554
No 12
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=3e-37 Score=347.47 Aligned_cols=271 Identities=19% Similarity=0.219 Sum_probs=166.9
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHH
Q psy8109 610 DVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLY 689 (1011)
Q Consensus 610 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~ 689 (1011)
+.+..|..|.||||.|+..|+.++|++|++ .|++++..+..|.||||+|+..|+.+++++|+++|++++.. .+.|||+
T Consensus 12 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~g~t~L~ 89 (364)
T 3ljn_A 12 NRIKSDDENMEKIHVAARKGQTDEVRRLIE-TGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLW-HGQKPIH 89 (364)
T ss_dssp ----CCHHHHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCB-TTBCHHH
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcccc-CCCCHHH
Confidence 456677888999999999999999999998 79999999999999999999999999999999998866542 3567777
Q ss_pred HHHHcCCCHHHHHHHHhC----CCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhC
Q psy8109 690 TALMKDPSLDIIKMLVKY----GADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFG 765 (1011)
Q Consensus 690 ~aa~~~~~~~iv~~Ll~~----g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~ 765 (1011)
.|+. .++.+++++|+++ |++++... ..... .. ....+++..+..|.||||+|+..
T Consensus 90 ~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~~------------~~~~~-~~-------~~~~~~~~~~~~g~t~L~~A~~~ 148 (364)
T 3ljn_A 90 LAVM-ANKTDLVVALVEGAKERGQMPESLL------------NECDE-RE-------VNEIGSHVKHCKGQTALHWCVGL 148 (364)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHTCCHHHHH------------TCCCC-CC-------EEEETTEEEEESCCCHHHHHHHS
T ss_pred HHHH-cCCHHHHHHHHHhccccCCCHHHHH------------hhcch-Hh-------hhhhccccCCCCCCCHHHHHHHc
Confidence 7777 6777777777776 54443300 00000 00 00112222455555555555555
Q ss_pred C--CHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCC-----ccccccCCCChHHHHHHHcCCHHHH
Q psy8109 766 N--NLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNAD-----TNLRTIKHGSTALHTAAFHNQLDII 838 (1011)
Q Consensus 766 g--~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~-----~~~~~~~~g~t~L~~Aa~~g~~~iv 838 (1011)
| +.++|++|+++|++++..+..|.||||+|+..|+.++|++|+++|++ ++. .+..|.||||+|+..|+.++|
T Consensus 149 g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v 227 (364)
T 3ljn_A 149 GPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDY-ANKQGNSHLHWAILINWEDVA 227 (364)
T ss_dssp CGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTC-CCTTCCCTTHHHHTTTCHHHH
T ss_pred CCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccc-cCCCCCcHHHHHHHcCCHHHH
Confidence 5 55555555555555555555555555555555555555555555555 444 445555555555555555555
Q ss_pred HHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCccc------------ccccCCCHHhhHHhhCCHHHH
Q psy8109 839 KLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEK------------ATKYRMTFESSKVVEKHVAKL 904 (1011)
Q Consensus 839 ~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~------------~~~~g~t~l~~a~~~~~~~~~ 904 (1011)
++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++. .+..++|++++|+..|+.+.+
T Consensus 228 ~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v 305 (364)
T 3ljn_A 228 MRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEV 305 (364)
T ss_dssp HHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHH
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHH
Confidence 555555555555555555555555555555555555555554322 344555555555555544443
No 13
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=4.8e-37 Score=345.82 Aligned_cols=228 Identities=17% Similarity=0.195 Sum_probs=195.5
Q ss_pred CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCC
Q psy8109 642 NIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYM 721 (1011)
Q Consensus 642 g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~ 721 (1011)
+.+++..+..|.||||+|+..|+.+++++|++.|++++..+. . |.
T Consensus 10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~---------------------------------~--g~ 54 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNR---------------------------------F--GC 54 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT---------------------------------T--CC
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC---------------------------------C--CC
Confidence 445566777788888888888888888888887777665433 2 77
Q ss_pred cHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHC----CCCCCC--------------
Q psy8109 722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKA----GADPDI-------------- 783 (1011)
Q Consensus 722 t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~----gad~~~-------------- 783 (1011)
||||+|+..|+ .+++++|++. |++++ +..|.||||+|+..|+.++|++|++. |++++.
T Consensus 55 t~L~~A~~~g~-~~~v~~Ll~~-g~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (364)
T 3ljn_A 55 TALHLACKFGC-VDTAKYLASV-GEVHS--LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIG 130 (364)
T ss_dssp CHHHHHHHHCC-HHHHHHHHHH-CCCCC--CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEET
T ss_pred cHHHHHHHcCC-HHHHHHHHHC-CCCcc--ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhc
Confidence 77888888887 7888888877 66544 34688888888888888888888888 777766
Q ss_pred ---CCcCCCCcccccccCC--hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCC-----cccccC
Q psy8109 784 ---LDLKDTSPLLSSCRQG--LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD-----INAEDK 853 (1011)
Q Consensus 784 ---~d~~g~t~L~~A~~~g--~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~-----in~~d~ 853 (1011)
.+..|.||||+|+..| +.++|++|+++|++++. .+..|.||||+|+..|+.++|++|+++|++ +|.+|.
T Consensus 131 ~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~ 209 (364)
T 3ljn_A 131 SHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA-KDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANK 209 (364)
T ss_dssp TEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCT
T ss_pred cccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCC
Confidence 8889999999999999 99999999999999998 788999999999999999999999999999 999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHhhh
Q psy8109 854 YGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANI 909 (1011)
Q Consensus 854 ~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~ 909 (1011)
.|+||||+|+..|+.++|++|+++|++++..|..|.|||++|+..|+.++++.+..
T Consensus 210 ~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 265 (364)
T 3ljn_A 210 QGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQ 265 (364)
T ss_dssp TCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998644
No 14
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.6e-36 Score=322.80 Aligned_cols=251 Identities=26% Similarity=0.341 Sum_probs=185.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCC----------CcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCC
Q psy8109 257 ETDTPLHSAILNSDIELVKLLLEKGAN----------PLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVA 326 (1011)
Q Consensus 257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~----------~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~ 326 (1011)
.|.|+||+|+..|+.+.+..++..+.. .....+..|+||||+|+..|+.++|++|+++|+ +++..+..
T Consensus 14 ~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~--~~~~~~~~ 91 (285)
T 3d9h_A 14 LVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW--AVNIITAD 91 (285)
T ss_dssp ----------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTC--CSCEECTT
T ss_pred HHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCC
Confidence 688999999999998777776654321 122234459999999999999999999999998 78999999
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHH
Q psy8109 327 GLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLE 406 (1011)
Q Consensus 327 g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~ 406 (1011)
|.||||+|+..|+.++|++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++....+.|||++|+..|+.+
T Consensus 92 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~ 171 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVE 171 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHH
T ss_pred CCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999987777889999999999888
Q ss_pred HHHHHHhccCccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCC
Q psy8109 407 MVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINS 485 (1011)
Q Consensus 407 iv~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~ 485 (1011)
++++|++. |++++..+..|.||||+|+..|+.+++++|++ +++++.
T Consensus 172 ~v~~Ll~~---------------------------------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 218 (285)
T 3d9h_A 172 CVNSLIAY---------------------------------GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ 218 (285)
T ss_dssp HHHHHHHT---------------------------------TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHC---------------------------------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC
Confidence 88887764 55556666677777777777777777777777 566663
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHhc
Q psy8109 486 ENDLGKTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLSH 545 (1011)
Q Consensus 486 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ 545 (1011)
+..|.|||++|+..|+.+++++|+++|++++..+..|.|||++|+ ++.+++++|+++
T Consensus 219 -~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~ 275 (285)
T 3d9h_A 219 -GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLER 275 (285)
T ss_dssp -CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHH
T ss_pred -CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHh
Confidence 666777777777777777777777777777777777777777776 345667777665
No 15
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=321.22 Aligned_cols=246 Identities=23% Similarity=0.277 Sum_probs=205.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCC
Q psy8109 617 IGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDP 696 (1011)
Q Consensus 617 ~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~ 696 (1011)
.|.||||.|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-------------- 66 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLIS-QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVT-------------- 66 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC--------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC--------------
Confidence 46777777777777777777777 677777777777777777777777777777777776665433
Q ss_pred CHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHH
Q psy8109 697 SLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLK 776 (1011)
Q Consensus 697 ~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~ 776 (1011)
.. |.||||+|+..|+ .+++++|++. |++++. +..|.||||.|+..|+.+++++|++
T Consensus 67 -------------------~~--g~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~ 122 (261)
T 2xai_A 67 -------------------AD--WHTPLFNACVSGS-WDCVNLLLQH-GASVQP-ESDLASPIHEAARRGHVECVNSLIA 122 (261)
T ss_dssp -------------------TT--SCCHHHHHHHHTC-HHHHHHHHHT-TCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred -------------------CC--CCCHHHHHHHcCC-HHHHHHHHHC-CCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 33 7788888888888 8888888887 777774 3458999999999999999999999
Q ss_pred CCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCC
Q psy8109 777 AGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGK 856 (1011)
Q Consensus 777 ~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~ 856 (1011)
.|++++..+..|.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 123 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~ 200 (261)
T 2xai_A 123 YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ--GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGK 200 (261)
T ss_dssp TTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC--CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC--CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 9999999999999999999999999999999999999984 67899999999999999999999999999999999999
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCC--------cccccccCCCHHhhHHhhCCHHHHH
Q psy8109 857 IAFHSACQAKNWDIVTFLLDAGSN--------IEKATKYRMTFESSKVVEKHVAKLR 905 (1011)
Q Consensus 857 taL~~A~~~g~~~iv~~Ll~~ga~--------~~~~~~~g~t~l~~a~~~~~~~~~~ 905 (1011)
||||+|+..++ ++++|++++++ ++.++..|.|++|.+........++
T Consensus 201 tpl~~A~~~~~--~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~ 255 (261)
T 2xai_A 201 RPVELVPPESP--LAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLK 255 (261)
T ss_dssp CGGGGSCTTCT--HHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHH
T ss_pred Chhhhcccccc--HHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCCcHHHH
Confidence 99999997664 89999998875 4567899999999998877665554
No 16
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=8.6e-36 Score=318.28 Aligned_cols=220 Identities=24% Similarity=0.333 Sum_probs=199.7
Q ss_pred CcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q psy8109 213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRN 292 (1011)
Q Consensus 213 ~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g 292 (1011)
+|+||||+||..|+.++|++|++.|++++..+. .|.||||.|+..|+.++|++|+++|++++..+.. |
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----------~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g 69 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITA-----------DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTAD-W 69 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-----------TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-S
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-----------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-C
Confidence 589999999999999999999999999988877 8999999999999999999999999999888776 9
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCC
Q psy8109 293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNC 372 (1011)
Q Consensus 293 ~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~ 372 (1011)
.||||+|+..|+.++|++|+++|+ +++. +..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 146 (261)
T 2xai_A 70 HTPLFNACVSGSWDCVNLLLQHGA--SVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ 146 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTC--CSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCC--CCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCC
Confidence 999999999999999999999999 5553 4569999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcc-CccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCC
Q psy8109 373 LEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHI-NINHQDKDGWTPLTCSIKGQASLEVFHSIIEAGAD 450 (1011)
Q Consensus 373 ~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~ 450 (1011)
.+++++|+++|++++....+.||||+|+..|+.+++++|+++| +++..|..|.||+++|... .+++++|++.+.+
T Consensus 147 ~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~---~~~~~~ll~~~~~ 222 (261)
T 2xai_A 147 RACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE---SPLAQLFLEREGP 222 (261)
T ss_dssp HHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT---CTHHHHHHHC-CC
T ss_pred HHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc---ccHHHHHHhccCC
Confidence 9999999999999998778899999999999999999999988 8888888888888886643 3477888887654
No 17
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=8.9e-36 Score=316.68 Aligned_cols=241 Identities=23% Similarity=0.271 Sum_probs=157.8
Q ss_pred CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCcc-CCCCCCCc
Q psy8109 644 DVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLT-NEACYYMT 722 (1011)
Q Consensus 644 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~-~~~~~~~t 722 (1011)
++|.++..|.||||+|+..|+.-.+ + . .+...++.+++++|++.|++++.. +.. |.|
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~------~-------------~-~~~~~~~~~~v~~Ll~~g~~~~~~~d~~--g~t 59 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLET------G-------------N-SEEEEDAPAVISDFIYQGASLHNQTDRT--GET 59 (253)
T ss_dssp ----------------------------------------------------------------------CCCTT--SCC
T ss_pred CCCCCCCCCCcHHHHHHhccccccc------c-------------c-hhhcCCChHHHHHHHHccCCcccccCCC--CCc
Confidence 4566777777777777766531000 0 0 011255666677777776666433 333 788
Q ss_pred HHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCC-CCCCCCcCCCCcccccccCChH
Q psy8109 723 PLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGA-DPDILDLKDTSPLLSSCRQGLY 801 (1011)
Q Consensus 723 ~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga-d~~~~d~~g~t~L~~A~~~g~~ 801 (1011)
|||+|+..|+ .+++++|++. |++++..+..|.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+..|+.
T Consensus 60 ~L~~A~~~g~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~ 137 (253)
T 1yyh_A 60 ALHLAARYSR-SDAAKRLLEA-SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVE 137 (253)
T ss_dssp HHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCS
T ss_pred HHHHHHHcCC-HHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChH
Confidence 8888888888 8888888887 88888888888888888888888888888888876 7888888888888888888888
Q ss_pred HHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCc
Q psy8109 802 EIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI 881 (1011)
Q Consensus 802 ~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~ 881 (1011)
+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 138 ~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 216 (253)
T 1yyh_A 138 GMLEDLINSHADVNA-VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 216 (253)
T ss_dssp SHHHHHHHTTCCTTC-BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc
Confidence 888888888888886 6677888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccccccCCCHHhhHHhhCCHHHHHHhhh
Q psy8109 882 EKATKYRMTFESSKVVEKHVAKLRAANI 909 (1011)
Q Consensus 882 ~~~~~~g~t~l~~a~~~~~~~~~~~~~~ 909 (1011)
+..|..|.||+++|+..|+.++++.+..
T Consensus 217 ~~~d~~g~tpl~~A~~~g~~~i~~~l~~ 244 (253)
T 1yyh_A 217 DITDHMDRLPRDIAQERMHHDIVRLLDL 244 (253)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 8888888888888888888888877643
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.5e-35 Score=313.19 Aligned_cols=216 Identities=22% Similarity=0.188 Sum_probs=183.2
Q ss_pred HHHcCCHHHHHHHHHCCCCCcCC-CC-CCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHH
Q psy8109 659 ACYDKRLDLVEILLEANADVNLG-DG-TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDI 736 (1011)
Q Consensus 659 A~~~g~~~iv~~Ll~~ga~~~~~-~~-~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~i 736 (1011)
+...++.+++++|++.|++++.. +. +.||||.|+. .|+.+++++|+++|++++..+.. |.||||+|+..|+ .++
T Consensus 30 ~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~-~~~ 105 (253)
T 1yyh_A 30 EEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAAR-YSRSDAAKRLLEASADANIQDNM--GRTPLHAAVSADA-QGV 105 (253)
T ss_dssp ----------------------CCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHHTC-HHH
T ss_pred hhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHH-cCCHHHHHHHHHcCCCCCCCCCC--CCCHHHHHHHcCC-HHH
Confidence 55678999999999999998754 33 8999999998 99999999999999999998877 9999999999999 999
Q ss_pred HHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccc
Q psy8109 737 ARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNL 816 (1011)
Q Consensus 737 v~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~ 816 (1011)
+++|++....+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 106 v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 185 (253)
T 1yyh_A 106 FQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM 185 (253)
T ss_dssp HHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999995559999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy8109 817 RTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS 879 (1011)
Q Consensus 817 ~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga 879 (1011)
.+..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.+|+++|.....
T Consensus 186 -~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 186 -QNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247 (253)
T ss_dssp -CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC---
T ss_pred -cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence 78899999999999999999999999999999999999999999999999999999997643
No 19
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=7.8e-35 Score=307.30 Aligned_cols=186 Identities=26% Similarity=0.266 Sum_probs=106.6
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCC----CCCCCCcCCCCccccc
Q psy8109 720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGA----DPDILDLKDTSPLLSS 795 (1011)
Q Consensus 720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga----d~~~~d~~g~t~L~~A 795 (1011)
|.||||+|+..|+ .+++++|++. |++++..+..|.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|
T Consensus 46 g~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A 123 (241)
T 1k1a_A 46 RQTPLHLAVITTL-PSVVRLLVTA-GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVA 123 (241)
T ss_dssp SCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHH
T ss_pred CCCHHHHHHHcCC-HHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHH
Confidence 4455555555554 4555555554 45555555555555555555555555555555554 4555555555555555
Q ss_pred ccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHH
Q psy8109 796 CRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLL 875 (1011)
Q Consensus 796 ~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll 875 (1011)
+..|+.+++++|+++|++++......|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 124 ~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 203 (241)
T 1k1a_A 124 VNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLV 203 (241)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 55555555555555555555422245666666666666666666666666666666666666666666666666666666
Q ss_pred hcCCCcccccccCCCHHhhHHhhCCHHHHHHh
Q psy8109 876 DAGSNIEKATKYRMTFESSKVVEKHVAKLRAA 907 (1011)
Q Consensus 876 ~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~ 907 (1011)
++|++++..|..|.||+++|+..|+.++++.+
T Consensus 204 ~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l 235 (241)
T 1k1a_A 204 RSGADSSLKNCHNDTPLMVARSRRVIDILRGK 235 (241)
T ss_dssp HTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC-
T ss_pred hcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhh
Confidence 66666666666666666666666666655543
No 20
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3.5e-34 Score=301.38 Aligned_cols=221 Identities=22% Similarity=0.322 Sum_probs=135.9
Q ss_pred CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcH
Q psy8109 644 DVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTP 723 (1011)
Q Consensus 644 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~ 723 (1011)
+++..+..|.||||+|+..|+.+++++|+++|++++..+. . |.||
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~---------------------------------~--g~t~ 47 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSE---------------------------------D--QRTP 47 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT---------------------------------T--CCCH
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCC---------------------------------C--CCCH
Confidence 4455566666666666666666666666666555543322 1 4455
Q ss_pred HHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCC-CCCCCCCcCCCCcccccccCChHH
Q psy8109 724 LHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAG-ADPDILDLKDTSPLLSSCRQGLYE 802 (1011)
Q Consensus 724 l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~g-ad~~~~d~~g~t~L~~A~~~g~~~ 802 (1011)
||+|+..|+ .+++++|++. |++++..+..|.||||.|+..|+.+++++|++.| ++++..+..|.||||+|+..|+.+
T Consensus 48 L~~A~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 125 (237)
T 3b7b_A 48 LMEAAENNH-LEAVKYLIKA-GALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVD 125 (237)
T ss_dssp HHHHHHTTC-HHHHHHHHTT-TCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHhCC-HHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHH
Confidence 555555555 5555555554 5555555555556666666666666666666555 555555555666666666666666
Q ss_pred HHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcc
Q psy8109 803 IVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIE 882 (1011)
Q Consensus 803 iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~ 882 (1011)
++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 126 ~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 204 (237)
T 3b7b_A 126 LVKLLLSKGSDINI-RDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT 204 (237)
T ss_dssp HHHHHHHTTCCTTC-CCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred HHHHHHHCCCCCCc-cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC
Confidence 66666666666654 45566666666666666666666666666666666666666666666666666666666666666
Q ss_pred cccccCCCHHhhHHhhCCHH
Q psy8109 883 KATKYRMTFESSKVVEKHVA 902 (1011)
Q Consensus 883 ~~~~~g~t~l~~a~~~~~~~ 902 (1011)
..|..|.|||++|+..++..
T Consensus 205 ~~d~~g~t~l~~A~~~~~~~ 224 (237)
T 3b7b_A 205 LKNKEGETPLQCASLNSQVW 224 (237)
T ss_dssp CCCTTSCCHHHHSCTTCHHH
T ss_pred ccCCCCCCHHHHHHHHHHHH
Confidence 66666666666666666653
No 21
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.5e-34 Score=302.97 Aligned_cols=227 Identities=27% Similarity=0.357 Sum_probs=189.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCC
Q psy8109 617 IGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDP 696 (1011)
Q Consensus 617 ~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~ 696 (1011)
.+.+||+.|+..|+.+++++|+...+..++..+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~------------- 71 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD------------- 71 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-------------
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCC-------------
Confidence 4678888888888888888888855556777788888888888888888888888887776654332
Q ss_pred CHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHH
Q psy8109 697 SLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLK 776 (1011)
Q Consensus 697 ~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~ 776 (1011)
. |.||||+|+..|+ .+++++|++. |++++.++..|.||||+|+..|+.+++++|++
T Consensus 72 --------------------~--g~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 127 (231)
T 3aji_A 72 --------------------A--GWSPLHIAASAGX-DEIVKALLVK-GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLE 127 (231)
T ss_dssp --------------------T--SCCHHHHHHHHTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------------------C--CCCHHHHHHHcCH-HHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 2 7788888888888 7888888887 88888888888888888888888888888888
Q ss_pred CCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCC
Q psy8109 777 AGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGK 856 (1011)
Q Consensus 777 ~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~ 856 (1011)
+|++++..+..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 128 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 206 (231)
T 3aji_A 128 GGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI-QDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEK 206 (231)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSC
T ss_pred cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc-cCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 8888888888888888888888888888888888888887 677888899999988889999999888888888888889
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCCc
Q psy8109 857 IAFHSACQAKNWDIVTFLLDAGSNI 881 (1011)
Q Consensus 857 taL~~A~~~g~~~iv~~Ll~~ga~~ 881 (1011)
|||++|+..++.+++++|+++|+++
T Consensus 207 t~l~~A~~~~~~~i~~lL~~~~a~i 231 (231)
T 3aji_A 207 TPLQVAKGGLGLILKRLAEGEEASM 231 (231)
T ss_dssp CHHHHSCHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHhhHHHHHHHHHccccccC
Confidence 9999988888888888888887753
No 22
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=7.8e-35 Score=315.32 Aligned_cols=263 Identities=21% Similarity=0.130 Sum_probs=170.0
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCC---cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-CCcH
Q psy8109 612 NIENDIGETPLHVAVSHGCLEAVKFLLNTKNID---VNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTP 687 (1011)
Q Consensus 612 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~---~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~ 687 (1011)
+..|..|.||||.|+..|+.+++++|++ .|++ ++..+..|.||||+|+..|+.+++++|+++|++++..+. +.||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tp 81 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLG-FSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTA 81 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHH-HHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 4566777788888888888888888877 5665 677777778888888888888888888888877777665 7777
Q ss_pred HHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCC
Q psy8109 688 LYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN 767 (1011)
Q Consensus 688 L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~ 767 (1011)
||.|+. .++.+++++|+++|++....... +.+ . . ........+.++++.++..+.
T Consensus 82 L~~A~~-~~~~~~v~~Ll~~~~~~~~~~~~----~~~--~---------------~---~~~~~~~~~~~~~~~~~~~~~ 136 (282)
T 1oy3_D 82 LHLACR-VRAHTCACVLLQPRPSHPRDASD----TYL--T---------------Q---SQDCTPDTSHAPAAVDSQPNP 136 (282)
T ss_dssp HHHHTT-TTCHHHHHHHSSSCCSSCCCC----------------------------------------------------
T ss_pred HHHHHH-cCCcchhHhhhccCCCCchhhHH----HHh--h---------------c---ccccCcchhcchhhhcccccc
Confidence 777776 67777777777777664432211 000 0 0 001112234455555544433
Q ss_pred H-HHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccC
Q psy8109 768 L-DLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNA 846 (1011)
Q Consensus 768 ~-~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga 846 (1011)
. .+...+...+++++..+..|.||||+|+..|+.++|++|+++|++++...+..|+||||+|+..|+.++|++|+++|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga 216 (282)
T 1oy3_D 137 ENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGA 216 (282)
T ss_dssp -------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred chhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCC
Confidence 2 333444455677777788888888888888888888888888888887444558899999999999999999999999
Q ss_pred CcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCC
Q psy8109 847 DINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKH 900 (1011)
Q Consensus 847 ~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~ 900 (1011)
+++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|.....
T Consensus 217 d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 217 DPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp CTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC---------------
T ss_pred CCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCccc
Confidence 999999999999999999999999999999999999999999999998876554
No 23
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=5.8e-34 Score=299.71 Aligned_cols=194 Identities=29% Similarity=0.321 Sum_probs=184.7
Q ss_pred CCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCC
Q psy8109 710 DVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDT 789 (1011)
Q Consensus 710 ~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~ 789 (1011)
+++..+.. |.||||+|+..|+ .+++++|++. |++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.
T Consensus 3 ~~~~~~~~--g~t~L~~A~~~g~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 78 (237)
T 3b7b_A 3 NFKMEHQN--KRSPLHAAAEAGH-VDICHMLVQA-GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGS 78 (237)
T ss_dssp CCCCSSCC--SCCHHHHHHHHTC-HHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSC
T ss_pred CcccccCC--CCCHHHHHHHcCc-HHHHHHHHHc-CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCC
Confidence 34445555 9999999999999 9999999999 999999999999999999999999999999999999999999999
Q ss_pred CcccccccCChHHHHHHHHHcC-CCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCH
Q psy8109 790 SPLLSSCRQGLYEIVDTLLEYN-ADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNW 868 (1011)
Q Consensus 790 t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~ 868 (1011)
||||+|+..|+.+++++|+++| .+++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 79 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 157 (237)
T 3b7b_A 79 TCLHLAAKKGHYEVVQYLLSNGQMDVNC-QDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCV 157 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCH
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCccc-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCH
Confidence 9999999999999999999999 78876 778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHhh
Q psy8109 869 DIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAAN 908 (1011)
Q Consensus 869 ~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~ 908 (1011)
+++++|+++|++++..|..|.||||+|+..++.++++.+-
T Consensus 158 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 197 (237)
T 3b7b_A 158 DIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFL 197 (237)
T ss_dssp HHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHH
Confidence 9999999999999999999999999999999999998864
No 24
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.1e-34 Score=314.25 Aligned_cols=230 Identities=21% Similarity=0.239 Sum_probs=171.6
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHH
Q psy8109 645 VNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPL 724 (1011)
Q Consensus 645 ~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l 724 (1011)
++..+..|.||||+|+..|+.+++++|++.|++++. ++..+.. |.|||
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------------------~~~~~~~--g~t~L 49 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEY------------------------------LDLQNDL--GQTAL 49 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGG------------------------------GGCCCTT--SCCHH
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc------------------------------ccccCCC--CCCHH
Confidence 356788889999999999998888888887776321 1122222 67777
Q ss_pred HHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCC-------------CCCcCCCCc
Q psy8109 725 HYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPD-------------ILDLKDTSP 791 (1011)
Q Consensus 725 ~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~-------------~~d~~g~t~ 791 (1011)
|+|+..|+ .+++++|+++ |++++..+..|.||||+|+..|+.+++++|+++|++.. .....+.++
T Consensus 50 ~~A~~~g~-~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (282)
T 1oy3_D 50 HLAAILGE-ASTVEKLYAA-GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAP 127 (282)
T ss_dssp HHHHHHTC-HHHHHHHHHT-TCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------------------
T ss_pred HHHHHcCC-HHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcch
Confidence 77777777 7777777777 77777777777778887777777788887777776532 123456677
Q ss_pred ccccccCCh-HHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccC-CCCCHHHHHHHcCCHH
Q psy8109 792 LLSSCRQGL-YEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDK-YGKIAFHSACQAKNWD 869 (1011)
Q Consensus 792 L~~A~~~g~-~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~-~g~taL~~A~~~g~~~ 869 (1011)
++.++..+. ..+...+...+++++. .+..|.||||+|+..|+.++|++|+++|++++.++. .|+||||+|+..|+.+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~ 206 (282)
T 1oy3_D 128 AAVDSQPNPENEEEPRDEDWRLQLEA-ENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAAS 206 (282)
T ss_dssp ----------------CCCGGGGTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred hhhccccccchhhhhhhhhhhhcCCC-cCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHH
Confidence 777776654 3445566677888887 788999999999999999999999999999999985 4999999999999999
Q ss_pred HHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHhhh
Q psy8109 870 IVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANI 909 (1011)
Q Consensus 870 iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~ 909 (1011)
+|++|+++|++++.+|..|.||||+|+..|+.++++.+..
T Consensus 207 ~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 246 (282)
T 1oy3_D 207 VLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRA 246 (282)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHH
T ss_pred HHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHH
Confidence 9999999999999999999999999999999999998643
No 25
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=314.26 Aligned_cols=224 Identities=25% Similarity=0.315 Sum_probs=167.8
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHH
Q psy8109 648 KTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYA 727 (1011)
Q Consensus 648 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A 727 (1011)
+|..+.+||+.|+..|+.++|++|++.|++...... ..++..+.. +.|||+.|
T Consensus 7 kd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~-------------------------~~~~~~~~~--~~t~L~~a 59 (269)
T 4b93_B 7 KDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAE-------------------------DTVSAADPE--FCHPLCQC 59 (269)
T ss_dssp CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------------------
T ss_pred cCccchhHHHHHHHcCCHHHHHHHHHCCCccccccc-------------------------ccccccCcc--CCCHHHHH
Confidence 455566888888888888888888887765421110 011112222 78899999
Q ss_pred HHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHH
Q psy8109 728 SYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTL 807 (1011)
Q Consensus 728 ~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~L 807 (1011)
+..++...++++|++. |+++|.+|.+|+||||+|+..|+.++|++|++.|++++..+..|.||++.|+..++.+++++|
T Consensus 60 ~~~~~~~~~v~~Ll~~-Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~L 138 (269)
T 4b93_B 60 PKCAPAQKRLAKVPAS-GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCL 138 (269)
T ss_dssp ---------------C-CCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHhCCHHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHH
Confidence 8887755688888888 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccccc
Q psy8109 808 LEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKY 887 (1011)
Q Consensus 808 l~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~ 887 (1011)
+++|++++. .+..|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|+.++|++|+++|+|++.+|.+
T Consensus 139 l~~g~~~n~-~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~ 217 (269)
T 4b93_B 139 LDSNAKPNK-KDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKR 217 (269)
T ss_dssp HHTTCCSCC-CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT
T ss_pred HHCCCCCCC-CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 999999997 7888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHhhHHhhCC
Q psy8109 888 RMTFESSKVVEKH 900 (1011)
Q Consensus 888 g~t~l~~a~~~~~ 900 (1011)
|+|||++|+++++
T Consensus 218 G~TpL~~A~~~~~ 230 (269)
T 4b93_B 218 QRTAVDCAEQNSK 230 (269)
T ss_dssp SCCSGGGSCTTCH
T ss_pred CCCHHHHHHhCCc
Confidence 9999999988775
No 26
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.9e-35 Score=311.14 Aligned_cols=157 Identities=22% Similarity=0.266 Sum_probs=80.5
Q ss_pred cccCCCccHHHHHHhCCCH-HHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHH
Q psy8109 750 LRNFNNRTALNFAAFGNNL-DLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHT 828 (1011)
Q Consensus 750 ~~~~~g~t~L~~Aa~~g~~-~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~ 828 (1011)
..+..|.|||+.|+..++. .++++|++.|+++|..|..|+||||+|+..|+.++|++|++.|++++. .+..|.||++.
T Consensus 47 ~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~-~~~~g~t~l~~ 125 (269)
T 4b93_B 47 AADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGA-RNADQAVPLHL 125 (269)
T ss_dssp ----------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTC-CCTTCCCHHHH
T ss_pred ccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCc-cCCCCCCcccc
Confidence 3444555666666555443 355566666666666666666666666666666666666666666655 45556666666
Q ss_pred HHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHh
Q psy8109 829 AAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAA 907 (1011)
Q Consensus 829 Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~ 907 (1011)
|+..++.+++++|+++|+++|.+|..|+||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.++++.+
T Consensus 126 a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~L 204 (269)
T 4b93_B 126 ACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELL 204 (269)
T ss_dssp HHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred ccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHH
Confidence 6666666666666666666666666666666666666666666666666666666666666666666666666666554
No 27
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.8e-34 Score=301.22 Aligned_cols=229 Identities=25% Similarity=0.335 Sum_probs=210.0
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHH----CCCCCcCCCC-CCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCC
Q psy8109 646 NHKTKDGSTALFFACYDKRLDLVEILLE----ANADVNLGDG-TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYY 720 (1011)
Q Consensus 646 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~----~ga~~~~~~~-~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~ 720 (1011)
+.+|..|.||||+|+..|+.+++++|++ .|++++..+. +.||||.|+. .|+.+++++|+++|++++..+.. |
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~~~~~--g 79 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVI-TTLPSVVRLLVTAGASPMALDRH--G 79 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTTCCCTT--S
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHH-cCCHHHHHHHHHcCCCccccCCC--C
Confidence 5678999999999999999999999997 8999998887 9999999999 99999999999999999988877 9
Q ss_pred CcHHHHHHHCCCHHHHHHHHHHhcCC----CcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCC-cCCCCccccc
Q psy8109 721 MTPLHYASYRGDCNDIARFLVEECNA----DITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILD-LKDTSPLLSS 795 (1011)
Q Consensus 721 ~t~l~~A~~~g~~~~iv~~Ll~~~g~----~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d-~~g~t~L~~A 795 (1011)
.||||+|+..|+ .+++++|++. +. +++..+..|.||||.|+..|+.+++++|++.|++++..+ ..|.||||+|
T Consensus 80 ~t~l~~A~~~~~-~~~~~~Ll~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A 157 (241)
T 1k1a_A 80 QTAAHLACEHRS-PTCLRALLDS-AAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHA 157 (241)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHH-SCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHH
T ss_pred CCHHHHHHHcCC-HHHHHHHHHc-CCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHH
Confidence 999999999999 9999999998 55 888899999999999999999999999999999999998 7899999999
Q ss_pred ccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHH
Q psy8109 796 CRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLL 875 (1011)
Q Consensus 796 ~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll 875 (1011)
+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.++++.|+
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~ 236 (241)
T 1k1a_A 158 VENNSLSMVQLLLQHGANVNA-QMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKA 236 (241)
T ss_dssp HHTTCHHHHHHHHHTTCCTTC-BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC--
T ss_pred HHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhc
Confidence 999999999999999999997 7889999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCC
Q psy8109 876 DAGSN 880 (1011)
Q Consensus 876 ~~ga~ 880 (1011)
+.+++
T Consensus 237 ~~~aS 241 (241)
T 1k1a_A 237 TRPAS 241 (241)
T ss_dssp -----
T ss_pred cCCCC
Confidence 88763
No 28
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=5.4e-33 Score=291.07 Aligned_cols=224 Identities=32% Similarity=0.394 Sum_probs=167.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q psy8109 257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR 336 (1011)
Q Consensus 257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~ 336 (1011)
.+.+||+.|+..|++++|++|++.+.......+..|.||||+|+..|+.++|++|+++|+ +++..+..|.||||+|+.
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~ 82 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGV--PVNDKDDAGWSPLHIAAS 82 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC--CSCCCCTTSCCHHHHHHH
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCC--CCCCcCCCCCCHHHHHHH
Confidence 466888888888888888888887665433444448888888888888888888888887 678888888888888888
Q ss_pred cCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhcc
Q psy8109 337 RKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHI 415 (1011)
Q Consensus 337 ~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~ 415 (1011)
.|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.. ..+.||||+|+..|+.+++++|+++
T Consensus 83 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~- 161 (231)
T 3aji_A 83 AGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY- 161 (231)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-
T ss_pred cCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-
Confidence 88888888888888888888888888888888888888888888888887765 5567777777777777766666543
Q ss_pred CccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcHH
Q psy8109 416 NINHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLGKTPI 494 (1011)
Q Consensus 416 ~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~L 494 (1011)
|++++..+..|.||||+|+..|+.+++++|++ +++++..+..|.|||
T Consensus 162 --------------------------------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 209 (231)
T 3aji_A 162 --------------------------------KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPL 209 (231)
T ss_dssp --------------------------------TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHH
T ss_pred --------------------------------CCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 44555555556666666666666666666666 556666666666666
Q ss_pred HHHHHcCCHHHHHHHHhcCcc
Q psy8109 495 YFAIKNNHLEIFNLLLKLGAD 515 (1011)
Q Consensus 495 ~~A~~~g~~~iv~~Ll~~ga~ 515 (1011)
++|+..++.+++++|+++|++
T Consensus 210 ~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 210 QVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp HHSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHhhHHHHHHHHHcccccc
Confidence 666666666666666665543
No 29
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=6e-34 Score=307.74 Aligned_cols=236 Identities=21% Similarity=0.264 Sum_probs=189.9
Q ss_pred HHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCC
Q psy8109 632 EAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADV 711 (1011)
Q Consensus 632 ~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~ 711 (1011)
++.++|.+ . +++..+..|.||||+|+..|+.+++++|+++|++++..+ +.||||.|+. .|+.+++++|+++|+++
T Consensus 14 ~v~~lL~~-~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-g~t~L~~A~~-~g~~~~v~~Ll~~ga~~ 88 (285)
T 3kea_A 14 QLKSFLSS-K--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE-NEFPLHQAAT-LEDTKIVKILLFSGLDD 88 (285)
T ss_dssp HHHHHHHS-T--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT-TCCHHHHHTT-SSSCHHHHHHHHTTCCT
T ss_pred HHHHHHHh-C--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCHHHHHHH-cCCHHHHHHHHHCCCCC
Confidence 44444443 3 467777777888888888888888888887777777664 5677777776 67777777777777777
Q ss_pred CccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCC-ccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCC
Q psy8109 712 NLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNN-RTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTS 790 (1011)
Q Consensus 712 ~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g-~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t 790 (1011)
+..+.. |.||||+|+..|+ .+++++|++. |++++..+..| .||||+|+..|+.+++++|+++|++.... ..|.|
T Consensus 89 ~~~d~~--g~t~L~~A~~~g~-~~~v~~Ll~~-ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t 163 (285)
T 3kea_A 89 SQFDDK--GNTALYYAVDSGN-MQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLS 163 (285)
T ss_dssp TCCCTT--SCCHHHHHHHTTC-HHHHHHHHHH-CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHH
T ss_pred CCcCCC--CCcHHHHHHHcCC-HHHHHHHHhc-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCcc
Confidence 776665 8899999999998 8999999988 89999888888 79999999999999999999998876332 27889
Q ss_pred cccccccCChHHHHHHHHHcCCCccccccCCCChH-HHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHH
Q psy8109 791 PLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTA-LHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWD 869 (1011)
Q Consensus 791 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~-L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~ 869 (1011)
|||+|+..|+.++|++|+++|++++. .+..|+|| ||+|+..|+.+++++|+++|++++.+|. .|+..|+.+
T Consensus 164 ~L~~A~~~g~~~~v~~Ll~~gad~n~-~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~ 235 (285)
T 3kea_A 164 CIHITIKNGHVDMMILLLDYMTSTNT-NNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAE 235 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCT-TCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHH
T ss_pred HHHHHHHcChHHHHHHHHHcCCCCCc-ccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHH
Confidence 99999999999999999999998887 77788887 9999999999999999999999888773 567788999
Q ss_pred HHHHHHhcCCCccccc
Q psy8109 870 IVTFLLDAGSNIEKAT 885 (1011)
Q Consensus 870 iv~~Ll~~ga~~~~~~ 885 (1011)
+|++|+++|++++..+
T Consensus 236 iv~~Ll~~g~~~~~~~ 251 (285)
T 3kea_A 236 IAKMIIEKHVEYKSDS 251 (285)
T ss_dssp HHHHHHHHHHHHTTCT
T ss_pred HHHHHHHcCCCCCCcc
Confidence 9999999988876543
No 30
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.8e-33 Score=303.97 Aligned_cols=218 Identities=22% Similarity=0.222 Sum_probs=159.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q psy8109 257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR 336 (1011)
Q Consensus 257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~ 336 (1011)
.|.||||.|+..|+.++|++|+++|++++..+ |.||||+|+..|+.++|++|+++|+ +++..+..|.||||+|+.
T Consensus 30 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~---g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~d~~g~t~L~~A~~ 104 (285)
T 3kea_A 30 HGHSASYYAIADNNVRLVCTLLNAGALKNLLE---NEFPLHQAATLEDTKIVKILLFSGL--DDSQFDDKGNTALYYAVD 104 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT---TCCHHHHHTTSSSCHHHHHHHHTTC--CTTCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC---CCCHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCCCCcHHHHHHH
Confidence 77888888888888888888888888776652 7888888888888888888888887 677778888888888888
Q ss_pred cCcHHHHHHHHHCCCCCccCCCCC-CcHHHHHHHcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcc
Q psy8109 337 RKCLEIVKILLDKGADINSGNDDG-CTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHI 415 (1011)
Q Consensus 337 ~g~~~iv~~Ll~~ga~~n~~~~~g-~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~~ 415 (1011)
.|+.++|++|+++|++++..+..| .||||+|+..|+.+++++|+++|++......+.||||+|+..|+.+++++|+++
T Consensus 105 ~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~- 183 (285)
T 3kea_A 105 SGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDY- 183 (285)
T ss_dssp TTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHH-
T ss_pred cCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHc-
Confidence 888888888888888888888777 688888888888888888888887664334567777777777777777776654
Q ss_pred CccCCCCCCCcHhHHHHhcCCCHHHHHHHHHcCCCcccccCCCChH-HHHHHHcCCHHHHHHHHh-ccCCCCCCCCCCcH
Q psy8109 416 NINHQDKDGWTPLTCSIKGQASLEVFHSIIEAGADIKAKLMDGTTA-LHLACYFGNLAMVNYLVK-HIDINSENDLGKTP 493 (1011)
Q Consensus 416 ~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~-L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g~t~ 493 (1011)
|++++..+..|.|| ||+|+..|+.+++++|++ +++++..+.
T Consensus 184 --------------------------------gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~----- 226 (285)
T 3kea_A 184 --------------------------------MTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL----- 226 (285)
T ss_dssp --------------------------------HHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-----
T ss_pred --------------------------------CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-----
Confidence 33444455555565 666666666666666666 555555542
Q ss_pred HHHHHHcCCHHHHHHHHhcCcccccc
Q psy8109 494 IYFAIKNNHLEIFNLLLKLGADVAVK 519 (1011)
Q Consensus 494 L~~A~~~g~~~iv~~Ll~~ga~~~~~ 519 (1011)
.|+..|+.+++++|+++|+++...
T Consensus 227 --~a~~~~~~~iv~~Ll~~g~~~~~~ 250 (285)
T 3kea_A 227 --ENVLLDDAEIAKMIIEKHVEYKSD 250 (285)
T ss_dssp --GGGTTTCHHHHHHHHHHHHHHTTC
T ss_pred --hhhhcCCHHHHHHHHHcCCCCCCc
Confidence 345567777777777777665443
No 31
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=9.3e-33 Score=291.03 Aligned_cols=234 Identities=26% Similarity=0.354 Sum_probs=198.4
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHH
Q psy8109 612 NIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTA 691 (1011)
Q Consensus 612 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~a 691 (1011)
+..|..|.++|+.|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|++.|++++....
T Consensus 3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-------- 73 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGIYERCRELVE-AGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGG-------- 73 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBT--------
T ss_pred cccccccchHHHHHHHcCChHHHHHHHH-cCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcC--------
Confidence 4456667778888888888888888887 7777777777788888888887777777777777766543221
Q ss_pred HHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHH
Q psy8109 692 LMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLL 771 (1011)
Q Consensus 692 a~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv 771 (1011)
. .|.||||+|+..|+ .+++++|++. |++++..+..|.||||.|+..|+.+++
T Consensus 74 ------------------------~--~~~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~ 125 (240)
T 3eu9_A 74 ------------------------D--LNSTPLHWATRQGH-LSMVVQLMKY-GADPSLIDGEGCSCIHLAAQFGHTSIV 125 (240)
T ss_dssp ------------------------T--TTBCHHHHHHHHTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred ------------------------C--cCCChhHHHHHcCC-HHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCHHHHH
Confidence 1 27789999999998 8999999988 999999999999999999999999999
Q ss_pred HHHHHCCCCCCCCCcCCCCcccccccCCh-HHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCccc
Q psy8109 772 KFLLKAGADPDILDLKDTSPLLSSCRQGL-YEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINA 850 (1011)
Q Consensus 772 ~~Ll~~gad~~~~d~~g~t~L~~A~~~g~-~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~ 850 (1011)
++|+++|++++..+..|.||||+|+..++ .+++++|++.|++++......|.||||+|+..|+.+++++|+++|++++.
T Consensus 126 ~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 205 (240)
T 3eu9_A 126 AYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDA 205 (240)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred HHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999996665 89999999999999984444899999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcc
Q psy8109 851 EDKYGKIAFHSACQAKNWDIVTFLLDAGSNIE 882 (1011)
Q Consensus 851 ~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~ 882 (1011)
+|..|+|||++|++.|+.+++++|+++|++..
T Consensus 206 ~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 206 QNIKGESALDLAKQRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp BCTTSCBHHHHHHHTTCHHHHHHHHHHC----
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHHhhhccC
Confidence 99999999999999999999999999988764
No 32
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.3e-32 Score=285.27 Aligned_cols=224 Identities=29% Similarity=0.369 Sum_probs=196.8
Q ss_pred CCCCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q psy8109 210 SHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEK 289 (1011)
Q Consensus 210 ~~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~ 289 (1011)
.+..|.|+|++|+..|+.+++++|++.|++++..+. .|.||||.|+..|+.++|++|+++|++++....
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 73 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDK-----------ENVTLLHWAAINNRIDLVKYYISKGAIVDQLGG 73 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBT
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCC-----------CCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcC
Confidence 367788999999999999999999999999887776 899999999999999999999999999887777
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHH
Q psy8109 290 SRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIA 369 (1011)
Q Consensus 290 ~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~ 369 (1011)
..|.|||++|+..|+.+++++|+++|+ +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+.
T Consensus 74 ~~~~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~ 151 (240)
T 3eu9_A 74 DLNSTPLHWATRQGHLSMVVQLMKYGA--DPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAY 151 (240)
T ss_dssp TTTBCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CcCCChhHHHHHcCCHHHHHHHHHcCC--CCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHH
Confidence 779999999999999999999999998 788899999999999999999999999999999999999999999999997
Q ss_pred cCC-hhHHHHHHhcCCCCCCCC--CCCcHHHHHHhcCCHHHHHHHHhccCccCCCCCCCcHhHHHHhcCCCHHHHHHHHH
Q psy8109 370 QNC-LEVFNYLVNHGCDLSVPE--GERTALHMASQFGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQASLEVFHSIIE 446 (1011)
Q Consensus 370 ~g~-~~iv~~Ll~~g~~~~~~~--~~~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~~Ll~ 446 (1011)
.|+ .+++++|++.|++++... .+.||||+|+..|+.+++++|+++
T Consensus 152 ~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------------------------------- 199 (240)
T 3eu9_A 152 RTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA-------------------------------- 199 (240)
T ss_dssp HCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHH--------------------------------
T ss_pred hCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHc--------------------------------
Confidence 776 899999999999988762 677888888888887777777654
Q ss_pred cCCCcccccCCCChHHHHHHHcCCHHHHHHHHh
Q psy8109 447 AGADIKAKLMDGTTALHLACYFGNLAMVNYLVK 479 (1011)
Q Consensus 447 ~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~ 479 (1011)
|++++..+..|.|||++|+..|+.+++++|++
T Consensus 200 -g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~ 231 (240)
T 3eu9_A 200 -GANVDAQNIKGESALDLAKQRKNVWMINHLQE 231 (240)
T ss_dssp -TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred -CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 55666666667777777777777777777776
No 33
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=9.8e-33 Score=288.45 Aligned_cols=215 Identities=20% Similarity=0.254 Sum_probs=183.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCC
Q psy8109 652 GSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRG 731 (1011)
Q Consensus 652 g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g 731 (1011)
|.||||+|+..|+.+++++|++.|.++.. ..+.. |.||||+|+..|
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~--------------------------------~~~~~--g~t~L~~A~~~~ 47 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLL--------------------------------QKDQD--GRIPLHWSVSFQ 47 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTT--------------------------------CCCTT--SCCHHHHHHHTT
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccc--------------------------------cCCCC--CCCHHHHHHHcC
Confidence 45677777777776666666665544321 12223 888899998888
Q ss_pred CHHHHHHHHHHhcC--CCccc-ccCCCccHHHHHHhCCCHHHHHHHHHCC--CCCCCCCcCCCCcccccccCChHHHHHH
Q psy8109 732 DCNDIARFLVEECN--ADITL-RNFNNRTALNFAAFGNNLDLLKFLLKAG--ADPDILDLKDTSPLLSSCRQGLYEIVDT 806 (1011)
Q Consensus 732 ~~~~iv~~Ll~~~g--~~~~~-~~~~g~t~L~~Aa~~g~~~iv~~Ll~~g--ad~~~~d~~g~t~L~~A~~~g~~~iv~~ 806 (1011)
+ .+++++|++. | .+++. .+..|.||||+|+..|+.+++++|++.| ++++..+..|.||||+|+..|+.+++++
T Consensus 48 ~-~~~v~~Ll~~-~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 125 (228)
T 2dzn_A 48 A-HEITSFLLSK-MENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQF 125 (228)
T ss_dssp C-HHHHHHHHHT-CTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred C-HHHHHHHHhc-cccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHH
Confidence 8 8899999888 6 55555 7788999999999999999999999998 8888999999999999999999999999
Q ss_pred HHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhcc-CCcccccCCCCCHHHHHHHcCCHHHHHHHH-hcCCCcccc
Q psy8109 807 LLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN-ADINAEDKYGKIAFHSACQAKNWDIVTFLL-DAGSNIEKA 884 (1011)
Q Consensus 807 Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~g-a~in~~d~~g~taL~~A~~~g~~~iv~~Ll-~~ga~~~~~ 884 (1011)
|+++|++++. .+..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+ ++|++++..
T Consensus 126 Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~ 204 (228)
T 2dzn_A 126 LIENGASVRI-KDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLV 204 (228)
T ss_dssp HHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCB
T ss_pred HHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCcc
Confidence 9999999997 7789999999999999999999999999 999999999999999999999999999999 899999999
Q ss_pred cccCCCHHhhHHhhCCHHH
Q psy8109 885 TKYRMTFESSKVVEKHVAK 903 (1011)
Q Consensus 885 ~~~g~t~l~~a~~~~~~~~ 903 (1011)
|..|.||+++|...+..+.
T Consensus 205 ~~~g~t~l~~A~~~~~~~~ 223 (228)
T 2dzn_A 205 DNKGAKAEDVALNEQVKKF 223 (228)
T ss_dssp CTTSCBGGGGCSSTTHHHH
T ss_pred CCCCCcHHHHHHHHHHHHH
Confidence 9999999999977654443
No 34
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.1e-32 Score=286.85 Aligned_cols=216 Identities=23% Similarity=0.247 Sum_probs=174.5
Q ss_pred CCHHHHHHHHhhCCCCcccC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhC
Q psy8109 629 GCLEAVKFLLNTKNIDVNHK-TKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKY 707 (1011)
Q Consensus 629 g~~~iv~~Ll~~~g~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~ 707 (1011)
|+.+++++|++ .|++++.. +..|.||||+|+..|+.+++++|+++|++++
T Consensus 2 g~~~~i~~Ll~-~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------------------------- 52 (223)
T 2f8y_A 2 DAPAVISDFIY-QGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAN---------------------------- 52 (223)
T ss_dssp ---CCEETTEE-TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------------------------
T ss_pred CcHHHHHHHHH-cCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCC----------------------------
Confidence 45555666666 55555543 5566666666666666666666666555544
Q ss_pred CCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcC
Q psy8109 708 GADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLK 787 (1011)
Q Consensus 708 g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~ 787 (1011)
..+.. |.||||+|+..|+ .+++++|++....+++..+..|.||||+|+..|+.+++++|++.|++++..+..
T Consensus 53 -----~~~~~--g~t~L~~A~~~~~-~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 124 (223)
T 2f8y_A 53 -----IQDNM--GRTPLHAAVSADA-QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDL 124 (223)
T ss_dssp -----CCCTT--SCCHHHHHHHTTC-HHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT
T ss_pred -----CcCCC--CCCHHHHHHHcCC-HHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCC
Confidence 33333 7888888888888 888888888855588888888999999999999999999999999999999999
Q ss_pred CCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCC
Q psy8109 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKN 867 (1011)
Q Consensus 788 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~ 867 (1011)
|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+
T Consensus 125 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 203 (223)
T 2f8y_A 125 GKSALHWAAAVNNVDAAVVLLKNGANKDM-QNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 203 (223)
T ss_dssp SCBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcc
Confidence 99999999999999999999999999887 77889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcc
Q psy8109 868 WDIVTFLLDAGSNIE 882 (1011)
Q Consensus 868 ~~iv~~Ll~~ga~~~ 882 (1011)
.+++++|+++|+...
T Consensus 204 ~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 204 HDIVRLLDEYNLVRS 218 (223)
T ss_dssp HHHHHHHHHTTCSSC
T ss_pred hHHHHHHHHcCCCcc
Confidence 999999999998654
No 35
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=6.4e-32 Score=282.23 Aligned_cols=208 Identities=23% Similarity=0.269 Sum_probs=179.0
Q ss_pred cchHHHHHHHcCCHHHHHHHHHCCCCCCc-ccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcC--CCCcccccC
Q psy8109 214 GYKALCWALQEKKTDIAKLLVDKGVPLNL-VDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKG--ANPLAIEKS 290 (1011)
Q Consensus 214 g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~-~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g--~~~~~~~~~ 290 (1011)
|.||||+||..|+.++|++|++.|.++.. .+. .|.||||.|+..|+.++|++|++.| .+++...+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 70 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQ-----------DGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDD 70 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCT
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCC-----------CCCCHHHHHHHcCCHHHHHHHHhccccccccccCCC
Confidence 67999999999999999999998876543 333 7899999999999999999999999 444442344
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHc
Q psy8109 291 RNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQ 370 (1011)
Q Consensus 291 ~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~ 370 (1011)
.|.||||+|+..|+.+++++|+++|...+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus 71 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 150 (228)
T 2dzn_A 71 SGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASV 150 (228)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 59999999999999999999999984448888999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHhcC-CCCCCC-CCCCcHHHHHHhcCCHHHHHHHH-hcc-CccCCCCCCCcHhHHHH
Q psy8109 371 NCLEVFNYLVNHG-CDLSVP-EGERTALHMASQFGNLEMVNYLL-KHI-NINHQDKDGWTPLTCSI 432 (1011)
Q Consensus 371 g~~~iv~~Ll~~g-~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll-~~~-~~~~~~~~~~t~l~~a~ 432 (1011)
|+.+++++|+++| ++++.. ..|.||||+|+..|+.+++++|+ +.| +++..+..|.||+++|.
T Consensus 151 ~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~ 216 (228)
T 2dzn_A 151 GSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL 216 (228)
T ss_dssp TCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCS
T ss_pred CCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHH
Confidence 9999999999999 888876 77889999999999999999998 555 56666666666666553
No 36
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-32 Score=299.67 Aligned_cols=261 Identities=25% Similarity=0.305 Sum_probs=173.8
Q ss_pred HHHHcCCHHHHHHHHhhCCCCccc---------CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCC-CCcHHHHHHH
Q psy8109 624 VAVSHGCLEAVKFLLNTKNIDVNH---------KTKDGSTALFFACYDKRLDLVEILLEANADVNLGDG-TYTPLYTALM 693 (1011)
Q Consensus 624 ~A~~~g~~~iv~~Ll~~~g~~~~~---------~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~t~L~~aa~ 693 (1011)
.++..+..+.++.++. ....+.. .+..+.|||+.|+..|+.+++++|+++|++++..+. +.||||.|+.
T Consensus 4 ~~a~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 82 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIG-SETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACI 82 (299)
T ss_dssp HHHHHHHHHHHHHHHH-TTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHH
T ss_pred hHHHHHHHHHHHHHHc-cccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 3455556666666655 2322221 112345677777777777777777777777665554 5555555555
Q ss_pred cCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHH
Q psy8109 694 KDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKF 773 (1011)
Q Consensus 694 ~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~ 773 (1011)
.|+.+++++|+++|++++..+.. |.||||+|+..|+ .+++++|++. |++++..+..|.||||+|+..|+.+++++
T Consensus 83 -~g~~~~v~~Ll~~ga~~~~~~~~--g~tpL~~A~~~g~-~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 157 (299)
T 1s70_B 83 -DDNVDMVKFLVENGANINQPDNE--GWIPLHAAASCGY-LDIAEYLISQ-GAHVGAVNSEGDTPLDIAEEEAMEELLQN 157 (299)
T ss_dssp -TTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHHTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHCCSHHHHHHHHH
T ss_pred -cCCHHHHHHHHHCCCCCCCCCCC--CCcHHHHHHHcCC-HHHHHHHHhC-CCCCCCcCCCCCCHHHHHHhcchHHHHHH
Confidence 55555555555555555555544 5555555555555 5555555555 55555555555555555555555555555
Q ss_pred HHHC-CCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCccccc
Q psy8109 774 LLKA-GADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAED 852 (1011)
Q Consensus 774 Ll~~-gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d 852 (1011)
|+.. |++++..+..+.++ ....+..++..+.......+..|.||||+|+..|+.++|++|+++|+++|.+|
T Consensus 158 ll~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d 229 (299)
T 1s70_B 158 EVNRQGVDIEAARKEEERI--------MLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD 229 (299)
T ss_dssp HHHHHTCCHHHHHHHHHHH--------HHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCC
T ss_pred HHhhcCCCchhhhhhhhhH--------HHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcC
Confidence 5432 33333222111111 11233344444544444466789999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhh
Q psy8109 853 KYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVE 898 (1011)
Q Consensus 853 ~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~ 898 (1011)
..|+||||+|+..|+.++|++|+++|++++..|..|.||+++|...
T Consensus 230 ~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 230 YDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG
T ss_pred CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999754
No 37
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.6e-32 Score=285.77 Aligned_cols=209 Identities=23% Similarity=0.276 Sum_probs=195.9
Q ss_pred CCHHHHHHHHhCCCCCCcc-CCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHH
Q psy8109 696 PSLDIIKMLVKYGADVNLT-NEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFL 774 (1011)
Q Consensus 696 ~~~~iv~~Ll~~g~~~~~~-~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~L 774 (1011)
|+.+++++|+++|++++.. +.. |.||||+|+..|+ .+++++|++. |++++..+..|.||||+|+..|+.+++++|
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~--g~t~L~~A~~~g~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 77 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRT--GETALHLAARYSR-SDAAKRLLEA-SADANIQDNMGRTPLHAAVSADAQGVFQIL 77 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTT--CCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CcHHHHHHHHHcCCCcccccCCC--CCchHHHHHHcCC-HHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 5677788888888888765 444 9999999999999 9999999999 999999999999999999999999999999
Q ss_pred HHCCC-CCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccC
Q psy8109 775 LKAGA-DPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDK 853 (1011)
Q Consensus 775 l~~ga-d~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~ 853 (1011)
++.++ +++..+..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 78 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 156 (223)
T 2f8y_A 78 IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA-VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN 156 (223)
T ss_dssp HHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcC-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 99987 8999999999999999999999999999999999997 778999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHhhh
Q psy8109 854 YGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAANI 909 (1011)
Q Consensus 854 ~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~ 909 (1011)
.|.||||+|+..|+.+++++|+++|++++..|..|.||+++|+..++.++++.+..
T Consensus 157 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~ 212 (223)
T 2f8y_A 157 REETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDE 212 (223)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988644
No 38
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2.4e-34 Score=317.31 Aligned_cols=249 Identities=15% Similarity=0.095 Sum_probs=186.8
Q ss_pred HHHHHHHHhhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCC---------------C---CCcHHHHHH
Q psy8109 631 LEAVKFLLNTKNIDVNHKTKDGSTALFFACYDKRLDLVEILLEANADVNLGD---------------G---TYTPLYTAL 692 (1011)
Q Consensus 631 ~~iv~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~---------------~---~~t~L~~aa 692 (1011)
.+++++|++ .|++++..+..|.|+++ |+.+++++|+++|++++... . ..+.++.++
T Consensus 32 ~dlv~~ll~-~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~ 105 (327)
T 1sw6_A 32 HDLTSDFLS-SPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSF 105 (327)
T ss_dssp TTCCCSTTT-SSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CH
T ss_pred CchHHHHhh-CCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHH
Confidence 344555555 55555555555555544 55555555555555543210 0 111223333
Q ss_pred HcCCCHHHHHHHHhCCCCCCc-cCCCCCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCC---H
Q psy8109 693 MKDPSLDIIKMLVKYGADVNL-TNEACYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNN---L 768 (1011)
Q Consensus 693 ~~~~~~~iv~~Ll~~g~~~~~-~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~---~ 768 (1011)
. .+..+++++|++.|++++. .+.. |.||||+|+..|+ .+++++|+++ |++++.++..|+||||+|+..|+ .
T Consensus 106 ~-~~~~~~~~~l~~~g~dvn~~~d~~--g~TpLh~Aa~~g~-~~~v~~Ll~~-Gad~n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 106 D-SLLQEVNDAFPNTQLNLNIPVDEH--GNTPLHWLTSIAN-LELVKHLVKH-GSNRLYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp H-HHHHHHHHHCTTSCCCSCSCCSTT--CCCHHHHHHHTTC-HHHHHHHHHT-TCCTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred H-hhHHHHHHHHHhcCCCcccccCCC--CCcHHHHHHHcCC-HHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhcccccH
Confidence 3 5567888899999999998 6776 9999999999999 9999999998 99999999999999999999988 6
Q ss_pred HHHHHHHHCC-CCCCCCCcCCCCccccccc----CChHHHHHHHHHc--------------------CCCccccccCCCC
Q psy8109 769 DLLKFLLKAG-ADPDILDLKDTSPLLSSCR----QGLYEIVDTLLEY--------------------NADTNLRTIKHGS 823 (1011)
Q Consensus 769 ~iv~~Ll~~g-ad~~~~d~~g~t~L~~A~~----~g~~~iv~~Ll~~--------------------g~~~~~~~~~~g~ 823 (1011)
++++.|++.+ ++++..+..|+||||+|+. .|+.+++++|++. |++++. .+..|+
T Consensus 181 ~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~-~~~~g~ 259 (327)
T 1sw6_A 181 GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND-KNGERK 259 (327)
T ss_dssp TCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------
T ss_pred HHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccc-ccccCC
Confidence 8888888876 7789999999999999998 8999999999987 888887 788999
Q ss_pred hHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhC
Q psy8109 824 TALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEK 899 (1011)
Q Consensus 824 t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~ 899 (1011)
||||.|+. +++|+++ ++|.+|..|+||||+|+..|+.++|++|+++||+++.+|..|+||||+|++.|
T Consensus 260 t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 260 DSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred ChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 99999985 8999988 68889999999999999999999999999999999999999999999998764
No 39
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.98 E-value=2e-32 Score=299.18 Aligned_cols=269 Identities=23% Similarity=0.294 Sum_probs=206.3
Q ss_pred HHHHcCCHHHHHHHHHcCCCCcccc--------cCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHH
Q psy8109 264 SAILNSDIELVKLLLEKGANPLAIE--------KSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIAC 335 (1011)
Q Consensus 264 ~A~~~g~~~iv~~Ll~~g~~~~~~~--------~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa 335 (1011)
.++..|+.+.++.++.......... ...|.|||+.||..|+.++|++|+++|+ +++..+..|.||||+||
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~ 81 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGA--DINYANVDGLTALHQAC 81 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCC--CTTCBCTTCCBHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCC--CCcccCCCCCCHHHHHH
Confidence 4677788888888887765533221 1236689999999999999999999998 78999999999999999
Q ss_pred hcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhc
Q psy8109 336 RRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKH 414 (1011)
Q Consensus 336 ~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~ 414 (1011)
..|+.++|++|+++|++++..+..|.||||+|+..|+.++|++|+++|++++.. ..+.|||++|+..|+.+++++++..
T Consensus 82 ~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~ 161 (299)
T 1s70_B 82 IDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNR 161 (299)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999877 6789999999999999999999876
Q ss_pred cCcc--CCCCCCCcHhHHHHhcCCCHHHHHHHHHcC-CCcccccCCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCCC
Q psy8109 415 ININ--HQDKDGWTPLTCSIKGQASLEVFHSIIEAG-ADIKAKLMDGTTALHLACYFGNLAMVNYLVK-HIDINSENDLG 490 (1011)
Q Consensus 415 ~~~~--~~~~~~~t~l~~a~~~~~~~~i~~~Ll~~g-~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~-~~~~~~~~~~g 490 (1011)
...+ ..+..+.++ ....+..++..+ ......+..|.||||+|+..|+.+++++|++ +++++..+..|
T Consensus 162 ~~~~~~~~~~~~~~~---------~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g 232 (299)
T 1s70_B 162 QGVDIEAARKEEERI---------MLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDG 232 (299)
T ss_dssp HTCCHHHHHHHHHHH---------HHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTC
T ss_pred cCCCchhhhhhhhhH---------HHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCC
Confidence 4211 111111111 122233334433 3334455667788888888888888888887 67777777778
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHHh
Q psy8109 491 KTPIYFAIKNNHLEIFNLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLLS 544 (1011)
Q Consensus 491 ~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~ 544 (1011)
.||||+|+..|+.+++++|+++|++++..+..|.||+++|+.. ..+++..++.
T Consensus 233 ~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~-~~~~l~~l~~ 285 (299)
T 1s70_B 233 WTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED-ILGYLEELQK 285 (299)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG-GGHHHHHHHH
T ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH-HHHHHHHHHH
Confidence 8888888888888888888888888877777777887777553 3444444444
No 40
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=3.1e-33 Score=308.46 Aligned_cols=273 Identities=17% Similarity=0.149 Sum_probs=206.3
Q ss_pred cCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc-------------cC
Q psy8109 224 EKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIE-------------KS 290 (1011)
Q Consensus 224 ~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-------------~~ 290 (1011)
....++|++|+++|++++..+. .|.++++ |+.++|++|+++|++++... ..
T Consensus 29 ~~~~dlv~~ll~~ga~i~~~~~-----------~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~ 92 (327)
T 1sw6_A 29 TFTHDLTSDFLSSPLKIMKALP-----------SPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSE 92 (327)
T ss_dssp ECCTTCCCSTTTSSCCCEECBC-----------CCCCCCH-----HHHHHHHHHHHHHHC--------------------
T ss_pred hhcCchHHHHhhCCcccccCCC-----------CCCcccC-----chhHHHHHHHHhccCCccccchHhhhccccccccc
Confidence 4566889999999999998887 7888877 99999999999998765410 00
Q ss_pred CC---CcHHHHHHHhCCHHHHHHHHHcCCCCCCcc-cCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHH
Q psy8109 291 RN---RTALHVAAIVESVDIVKLLFDYGAEKSVNV-QNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFC 366 (1011)
Q Consensus 291 ~g---~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~-~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~ 366 (1011)
.+ .+.+|.|+..+..+++++|+++|+ ++|. .+..|+||||+||..|+.++|++|+++|++++..+..|.||||+
T Consensus 93 ~~~~~~~~~~~a~~~~~~~~~~~l~~~g~--dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~ 170 (327)
T 1sw6_A 93 GGSSNQQQQHVSFDSLLQEVNDAFPNTQL--NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVK 170 (327)
T ss_dssp -----------CHHHHHHHHHHHCTTSCC--CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHH
T ss_pred ccCCccchhHHHHHhhHHHHHHHHHhcCC--CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 11 223577888888899999999999 7888 89999999999999999999999999999999999999999999
Q ss_pred HHHcCC---hhHHHHHHhcC-CCCCCC-CCCCcHHHHHHh----cCCHHHHHHHHhccCccCCCCCCCcHhHHHHhcCCC
Q psy8109 367 AIAQNC---LEVFNYLVNHG-CDLSVP-EGERTALHMASQ----FGNLEMVNYLLKHININHQDKDGWTPLTCSIKGQAS 437 (1011)
Q Consensus 367 A~~~g~---~~iv~~Ll~~g-~~~~~~-~~~~t~L~~Aa~----~g~~~iv~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~ 437 (1011)
|+..|+ .++++.|++.+ ++++.. ..|.||||+|+. .|+.+++++|++.+.. ...... .
T Consensus 171 A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~-----------~~~~~~--~ 237 (327)
T 1sw6_A 171 AVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMG-----------WIVKKQ--N 237 (327)
T ss_dssp HHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHH-----------HHHHGG--G
T ss_pred HHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHH-----------HHhccc--c
Confidence 999998 78888888886 666665 678999999999 8999999999986310 000000 0
Q ss_pred HHHHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCcccc
Q psy8109 438 LEVFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHIDINSENDLGKTPIYFAIKNNHLEIFNLLLKLGADVA 517 (1011)
Q Consensus 438 ~~i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~ 517 (1011)
..+...+...|++++..+..|.||||.|+. +++|++. +++..+..|+||||+|+..|+.+++++|+++|++++
T Consensus 238 ~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~-~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~ 310 (327)
T 1sw6_A 238 RPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN-MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF 310 (327)
T ss_dssp CCEEEC----------------CHHHHHCS------HHHHHHH-TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTT
T ss_pred hHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 001112244588999999999999999985 8888886 789999999999999999999999999999999999
Q ss_pred cccCCCCCHHHHHHHhC
Q psy8109 518 VKMKSNFTCLHVACEFA 534 (1011)
Q Consensus 518 ~~~~~~~t~L~~A~~~g 534 (1011)
..+..|.||||+|+..|
T Consensus 311 ~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 311 IANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CCCTTSCCGGGGTCC--
T ss_pred ccCCCCCCHHHHHHhcC
Confidence 99999999999998754
No 41
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=4.8e-31 Score=258.99 Aligned_cols=159 Identities=30% Similarity=0.434 Sum_probs=149.0
Q ss_pred cHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChH
Q psy8109 722 TPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLY 801 (1011)
Q Consensus 722 t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~ 801 (1011)
++|+.||..|+ .++|++|++. |+++|.+|..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 6 ~~L~~Aa~~G~-~~~v~~Ll~~-Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGN-KDRVKDLIEN-GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCC-HHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCH
Confidence 57999999999 9999999998 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCc
Q psy8109 802 EIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI 881 (1011)
Q Consensus 802 ~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~ 881 (1011)
++|++|+++|+++|. .+..|+||||+|+..|+.++|++|+++|++++.+|..|+|||++|+..|+.++|++|+++||++
T Consensus 84 ~~v~~Ll~~gadvn~-~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 84 EVVKLLISKGADVNA-KDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred HHHHHHHHCcCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 999999999999998 7889999999999999999999999999999999999999999999999999999999999998
Q ss_pred cc
Q psy8109 882 EK 883 (1011)
Q Consensus 882 ~~ 883 (1011)
+.
T Consensus 163 e~ 164 (169)
T 4gpm_A 163 EH 164 (169)
T ss_dssp --
T ss_pred CC
Confidence 74
No 42
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=2.7e-30 Score=253.72 Aligned_cols=159 Identities=40% Similarity=0.510 Sum_probs=147.6
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcH
Q psy8109 216 KALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTA 295 (1011)
Q Consensus 216 t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~ 295 (1011)
++|+.||+.|+.++|++|++.|+++|..+. .|.|||+.|+..|+.+++++|++.|++++..+.. |+||
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~-----------~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~-g~Tp 73 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDS-----------DGRTPLHHAAENGHKEVVKLLISKGADVNAKDSD-GRTP 73 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-----------CCCCHHHHHHHcCCHHHHHHHHhcccchhhhccC-CCCH
Confidence 579999999999999999999999998887 8999999999999999999999999999888776 9999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhH
Q psy8109 296 LHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEV 375 (1011)
Q Consensus 296 L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~i 375 (1011)
||+|+..|+.++|++|+++|+ ++|.+|..|+||||+||..|+.++|++|+++|++++..|..|+|||++|+..|+.++
T Consensus 74 Lh~A~~~g~~~~v~~Ll~~ga--dvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i 151 (169)
T 4gpm_A 74 LHHAAENGHKEVVKLLISKGA--DVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEV 151 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCcC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHH
Confidence 999999999999999999999 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCC
Q psy8109 376 FNYLVNHGCDLSV 388 (1011)
Q Consensus 376 v~~Ll~~g~~~~~ 388 (1011)
+++|+++|++++.
T Consensus 152 v~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 152 VKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHHTC------
T ss_pred HHHHHHCCCCcCC
Confidence 9999999999864
No 43
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=3.8e-30 Score=269.56 Aligned_cols=190 Identities=28% Similarity=0.337 Sum_probs=173.0
Q ss_pred CcchHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcc----c
Q psy8109 213 QGYKALCWALQEKKTDIAKLLVDK-GVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLA----I 287 (1011)
Q Consensus 213 ~g~t~L~~Aa~~G~~~iv~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~----~ 287 (1011)
.|.||||+||..|+.++|++|++. |++++..+. .|.||||.|+..|+.++|++|++.|+++.. .
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~-----------~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 70 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGA-----------MGETALHIAALYDNLEAAMVLMEAAPELVFEPMTS 70 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCC-----------CCCCHHHHHHHcCCHHHHHHHHHcCchhccccccc
Confidence 478999999999999999999998 999988877 899999999999999999999999987632 1
Q ss_pred ccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCC-------------CCCCHHHHHHhcCcHHHHHHHHHCCCCCc
Q psy8109 288 EKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNV-------------AGLTPLHIACRRKCLEIVKILLDKGADIN 354 (1011)
Q Consensus 288 ~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~-------------~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n 354 (1011)
.+..|.||||+|+..|+.++|++|+++|+ +++..+. .|.||||+|+..|+.++|++|+++|++++
T Consensus 71 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 148 (232)
T 2rfa_A 71 ELYEGQTALHIAVINQNVNLVRALLARGA--SVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR 148 (232)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred cCCCCcCHHHHHHHcCCHHHHHHHHhCCC--CCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 22349999999999999999999999999 5666554 79999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHcCChhHH----HHHHhcCCCCC------CC-CCCCcHHHHHHhcCCHHHHHHHHhcc
Q psy8109 355 SGNDDGCTPLFCAIAQNCLEVF----NYLVNHGCDLS------VP-EGERTALHMASQFGNLEMVNYLLKHI 415 (1011)
Q Consensus 355 ~~~~~g~t~L~~A~~~g~~~iv----~~Ll~~g~~~~------~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~ 415 (1011)
..|..|.||||+|+..|+.+++ ++|+++|++.. .. ..|.|||++|+..|+.+++++|++++
T Consensus 149 ~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 149 AQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp CCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 9999999999999999999988 99999999873 33 67899999999999999999999986
No 44
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=5.8e-32 Score=284.10 Aligned_cols=217 Identities=24% Similarity=0.223 Sum_probs=183.0
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHH
Q psy8109 647 HKTKDGSTALFFACYDKRLDLVEILLEANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHY 726 (1011)
Q Consensus 647 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~ 726 (1011)
..+..|.||||+|+..|+.+++++|++.+.. .+++++..+.. |.||||+
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-----------------------------~~~~~~~~~~~--g~t~L~~ 51 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKG-----------------------------DLAFLNFQNNL--QQTPLHL 51 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC----------------------------------CCCCCCCCTT--CCCHHHH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhc-----------------------------cHHHhhccCCC--CCCHHHH
Confidence 4567788888888888888877777665432 12344545544 8899999
Q ss_pred HHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCC------CCCCCcCCCCcccccccCCh
Q psy8109 727 ASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD------PDILDLKDTSPLLSSCRQGL 800 (1011)
Q Consensus 727 A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad------~~~~d~~g~t~L~~A~~~g~ 800 (1011)
|+..|+ .+++++|++. |++++.++..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..|+
T Consensus 52 A~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~ 129 (236)
T 1ikn_D 52 AVITNQ-PEIAEALLGA-GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY 129 (236)
T ss_dssp HHHTTC-HHHHHCCCSC-CCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTC
T ss_pred HHHcCC-HHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCC
Confidence 999999 9999999988 999999999999999999999999999999999876 46678889999999999999
Q ss_pred HHHHHHHHHcCCCccccccC-CCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy8109 801 YEIVDTLLEYNADTNLRTIK-HGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS 879 (1011)
Q Consensus 801 ~~iv~~Ll~~g~~~~~~~~~-~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga 879 (1011)
.++|++|+++|++++. .+. .|.||||+|+..|+.++|++|+++|++++.+|..|+|||++|+..|+.+++++|+++|+
T Consensus 130 ~~~v~~Ll~~g~~~~~-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 130 LGIVELLVSLGADVNA-QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 208 (236)
T ss_dssp HHHHHHHHHHTCCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred HHHHHHHHHcCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcch
Confidence 9999999999999998 454 89999999999999999999999999999999999999999999999999999999999
Q ss_pred Ccc--cccccCCCHHhhHHh
Q psy8109 880 NIE--KATKYRMTFESSKVV 897 (1011)
Q Consensus 880 ~~~--~~~~~g~t~l~~a~~ 897 (1011)
+.. ..+..|.|+.+.+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 209 ENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp GGGSSCCCCCTTTCCCCC--
T ss_pred hhhhcCCccchHHHHhhhcc
Confidence 876 778888998876554
No 45
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=2.1e-30 Score=271.55 Aligned_cols=187 Identities=22% Similarity=0.231 Sum_probs=153.1
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCC-----CCCCcCCCCcccc
Q psy8109 720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADP-----DILDLKDTSPLLS 794 (1011)
Q Consensus 720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~-----~~~d~~g~t~L~~ 794 (1011)
|.||||+|+..|+ .+++++|++..|++++.++..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+
T Consensus 3 g~t~L~~A~~~g~-~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 3 WESPLLLAAKEND-VQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp TTCHHHHHHHTTC-HHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCHHHHHHHcCC-HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 6788888888888 788888887767888888888888888888888888888888887776 5566678888888
Q ss_pred cccCChHHHHHHHHHcCCCccccc------------cCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHH
Q psy8109 795 SCRQGLYEIVDTLLEYNADTNLRT------------IKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSA 862 (1011)
Q Consensus 795 A~~~g~~~iv~~Ll~~g~~~~~~~------------~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A 862 (1011)
|+..|+.++|++|+++|++++... +..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 888888888888888888777632 12688888888888888888888888888888888888888888
Q ss_pred HHcCCHHHH----HHHHhcCCCc------ccccccCCCHHhhHHhhCCHHHHHHh
Q psy8109 863 CQAKNWDIV----TFLLDAGSNI------EKATKYRMTFESSKVVEKHVAKLRAA 907 (1011)
Q Consensus 863 ~~~g~~~iv----~~Ll~~ga~~------~~~~~~g~t~l~~a~~~~~~~~~~~~ 907 (1011)
+..|+.+++ ++|+++|+++ +..|..|+|||++|+..|+.++++.+
T Consensus 162 ~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~L 216 (232)
T 2rfa_A 162 ILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHL 216 (232)
T ss_dssp HTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 888888877 8888888887 57788888888888888888888765
No 46
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=9.6e-31 Score=274.80 Aligned_cols=209 Identities=21% Similarity=0.250 Sum_probs=182.4
Q ss_pred CCCCcchHHHHHHHcCCHHHHHHHHHCCC----CCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCc
Q psy8109 210 SHSQGYKALCWALQEKKTDIAKLLVDKGV----PLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPL 285 (1011)
Q Consensus 210 ~~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~----~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~ 285 (1011)
.+..|.||||+|+..|+.+++++|++.+. +++..+. .|.||||.|+..|+.++|++|+++|++++
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 72 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN-----------LQQTPLHLAVITNQPEIAEALLGAGCDPE 72 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCT-----------TCCCHHHHHHHTTCHHHHHCCCSCCCCSC
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCC-----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 36789999999999999999999998765 5666655 89999999999999999999999999998
Q ss_pred ccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCC----CCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCC-CC
Q psy8109 286 AIEKSRNRTALHVAAIVESVDIVKLLFDYGAEK----SVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGND-DG 360 (1011)
Q Consensus 286 ~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~----~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~-~g 360 (1011)
..+.. |.||||+|+..|+.+++++|+++++.+ .++..+..|.||||+|+..|+.++|++|+++|++++..+. .|
T Consensus 73 ~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g 151 (236)
T 1ikn_D 73 LRDFR-GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNG 151 (236)
T ss_dssp CCCTT-CCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTC
T ss_pred CcCCC-CCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 87776 999999999999999999999998732 2567888999999999999999999999999999999997 99
Q ss_pred CcHHHHHHHcCChhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhcc-Cc--cCCCCCCCcHhHH
Q psy8109 361 CTPLFCAIAQNCLEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHI-NI--NHQDKDGWTPLTC 430 (1011)
Q Consensus 361 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~-~~--~~~~~~~~t~l~~ 430 (1011)
.||||+|+..|+.++|++|+++|++++.. ..|.|||++|+..|+.+++++|+++| +. ...+..+.++...
T Consensus 152 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~ 225 (236)
T 1ikn_D 152 RTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDT 225 (236)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhh
Confidence 99999999999999999999999999987 77899999999999999999999987 22 3555666665543
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=1.2e-29 Score=259.18 Aligned_cols=188 Identities=24% Similarity=0.306 Sum_probs=161.9
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccC
Q psy8109 719 YYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQ 798 (1011)
Q Consensus 719 ~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~ 798 (1011)
++.|||+.|+..|+ .++++.|+...+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus 4 ~~~~~L~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 4 YEVGALLEAANQRD-TKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CCTTHHHHHHHTTC-HHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred ccccHHHHHHHhcc-HHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 37788888888888 88888888876668888888888999999988999999999998888888888888999999988
Q ss_pred ChHHHHHHHH-HcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhcc-CCcccccCCCCCHHHHHHHcCC-----HHHH
Q psy8109 799 GLYEIVDTLL-EYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYN-ADINAEDKYGKIAFHSACQAKN-----WDIV 871 (1011)
Q Consensus 799 g~~~iv~~Ll-~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~g-a~in~~d~~g~taL~~A~~~g~-----~~iv 871 (1011)
|+.+++++|+ ..+++++. .+..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++ .+++
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNK-HNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTC-CCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred CCHHHHHHHHhccCccccc-ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 9999999888 55567776 7778888999999999999999998888 8888888888999999988887 8889
Q ss_pred HHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHhh
Q psy8109 872 TFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAAN 908 (1011)
Q Consensus 872 ~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~ 908 (1011)
++|+++|++++..|..|.|||++|+..|+.++++.+.
T Consensus 162 ~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 198 (201)
T 3hra_A 162 KLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILA 198 (201)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHH
Confidence 9999999998888888899999999888888887653
No 48
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=3.7e-29 Score=255.62 Aligned_cols=190 Identities=27% Similarity=0.358 Sum_probs=177.3
Q ss_pred CCcchHHHHHHHcCCHHHHHHHHHCCC-CCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q psy8109 212 SQGYKALCWALQEKKTDIAKLLVDKGV-PLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKS 290 (1011)
Q Consensus 212 ~~g~t~L~~Aa~~G~~~iv~~Ll~~g~-~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~ 290 (1011)
..+.|+|++||..|+.+.++.|+..+. +++..+. .|.||||.|+..|+.++|++|+++|++++..+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 71 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDT-----------EGNTPLNIAVHNNDIEIAKALIDRGADINLQNSI 71 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCT-----------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCC-----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Confidence 567899999999999999999999876 8877766 8999999999999999999999999999887776
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHc-CCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCC-CCCccCCCCCCcHHHHHH
Q psy8109 291 RNRTALHVAAIVESVDIVKLLFDY-GAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKG-ADINSGNDDGCTPLFCAI 368 (1011)
Q Consensus 291 ~g~t~L~~Aa~~g~~~iv~~Ll~~-~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~g-a~~n~~~~~g~t~L~~A~ 368 (1011)
|.||||+|+..|+.+++++|+++ ++ +++..+..|.||||+|+..|+.+++++|+++| ++++..+..|.||||+|+
T Consensus 72 -g~t~l~~A~~~~~~~~~~~Ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~ 148 (201)
T 3hra_A 72 -SDSPYLYAGAQGRTEILAYMLKHATP--DLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAV 148 (201)
T ss_dssp -SCCHHHHHHHTTCHHHHHHHHHHSCC--CTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHH
T ss_pred -CCCHHHHHHHcCCHHHHHHHHhccCc--ccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHH
Confidence 99999999999999999999954 55 78889999999999999999999999999999 999999999999999999
Q ss_pred HcCC-----hhHHHHHHhcCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhcc
Q psy8109 369 AQNC-----LEVFNYLVNHGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHI 415 (1011)
Q Consensus 369 ~~g~-----~~iv~~Ll~~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~ 415 (1011)
..|+ .+++++|+++|++++.. ..|.|||++|+..|+.+++++|+++|
T Consensus 149 ~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 149 GLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9998 99999999999999987 77899999999999999999999864
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=3.7e-30 Score=276.80 Aligned_cols=217 Identities=19% Similarity=0.185 Sum_probs=160.5
Q ss_pred CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHH----CCCCCcCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCC
Q psy8109 642 NIDVNHKTKDGSTALFFACYDKRLDLVEILLE----ANADVNLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEA 717 (1011)
Q Consensus 642 g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~----~ga~~~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~ 717 (1011)
++..+..+..|.||||.|+..|+.++++.|++ .+++++... ...+.
T Consensus 3 ~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-----------------------------~~~~~- 52 (273)
T 2pnn_A 3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSE-----------------------------FKDPE- 52 (273)
T ss_dssp --------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGG-----------------------------GSCTT-
T ss_pred cccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcc-----------------------------cccCc-
Confidence 44556678888999999999999888887776 344433100 00111
Q ss_pred CCCCcHHHHHHHC---CCHHHHHHHHHHhcCCC-----------cccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCC
Q psy8109 718 CYYMTPLHYASYR---GDCNDIARFLVEECNAD-----------ITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDI 783 (1011)
Q Consensus 718 ~~~~t~l~~A~~~---g~~~~iv~~Ll~~~g~~-----------~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~ 783 (1011)
.|.||||+|+.. |+ .+++++|++. |++ +...+..|.||||+|+..|+.++|++|+++|++++.
T Consensus 53 -~g~tpL~~A~~~~~~g~-~~~v~~Ll~~-ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 53 -TGKTCLLKAMLNLHNGQ-NDTIALLLDV-ARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp -TCCCHHHHHHHSCBTTB-CHHHHHHHHH-HHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred -CCCCHHHHHHHHHhcCC-hHHHHHHHHh-hccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 155566666554 55 5566666655 332 233567899999999999999999999999999999
Q ss_pred CCc--------------CCCCcccccccCChHHHHHHHHH---cCCCccccccCCCChHHHHHHHcCC---------HHH
Q psy8109 784 LDL--------------KDTSPLLSSCRQGLYEIVDTLLE---YNADTNLRTIKHGSTALHTAAFHNQ---------LDI 837 (1011)
Q Consensus 784 ~d~--------------~g~t~L~~A~~~g~~~iv~~Ll~---~g~~~~~~~~~~g~t~L~~Aa~~g~---------~~i 837 (1011)
.+. .|.||||+|+..|+.++|++|++ +|++++. .+..|+||||+|+..|+ .++
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~-~d~~g~tpLh~A~~~~~~~~~~~~~~~~~ 208 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA-RDSVGNTVLHALVEVADNTVDNTKFVTSM 208 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC-CCTTSCCHHHHHHHHCCSCHHHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCcee-eCCCCCcHHHHHHHccCcchhHHHHHHHH
Confidence 987 79999999999999999999999 9999997 78899999999999998 899
Q ss_pred HHHHHhccCCcc-------cccCCCCCHHHHHHHcCCHHHHHHHHhcCC-CcccccccCCCHH
Q psy8109 838 IKLLLKYNADIN-------AEDKYGKIAFHSACQAKNWDIVTFLLDAGS-NIEKATKYRMTFE 892 (1011)
Q Consensus 838 v~~Ll~~ga~in-------~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga-~~~~~~~~g~t~l 892 (1011)
+++|+++|+++| .+|..|+||||+|+..|+.++|++|+++|| |+......+.+|-
T Consensus 209 v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 209 YNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHH 271 (273)
T ss_dssp HHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-------------
T ss_pred HHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhcc
Confidence 999999999997 489999999999999999999999999999 8887766666553
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=1e-29 Score=270.56 Aligned_cols=190 Identities=24% Similarity=0.292 Sum_probs=172.9
Q ss_pred CcchHHHHHHHcCCHH----HHHHHHHCCCCCCc----ccCCCCCccccCCCCCChHHHHHHHc---CCHHHHHHHHHcC
Q psy8109 213 QGYKALCWALQEKKTD----IAKLLVDKGVPLNL----VDKGVPLNYSRRIIETDTPLHSAILN---SDIELVKLLLEKG 281 (1011)
Q Consensus 213 ~g~t~L~~Aa~~G~~~----iv~~Ll~~g~~~~~----~~~~~~~~~~~~~~~~~t~L~~A~~~---g~~~iv~~Ll~~g 281 (1011)
.|+|+||+||..|+.+ ++++|++.|++++. .+. .|.||||.|+.. |+.++|++|++.|
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~-----------~g~t~L~~A~~~~~~g~~~~v~~Ll~~g 69 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGS-----------TGKTCLMKAVLNLQDGVNACIMPLLQID 69 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTT-----------TTBCHHHHHHHTCBTTBCTTHHHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCC-----------CCCCHHHHHHHccccchHHHHHHHHhcC
Confidence 3789999999999997 67888889999987 555 899999999999 9999999999999
Q ss_pred CCCcccc----------cCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCC-------------CCCHHHHHHhcC
Q psy8109 282 ANPLAIE----------KSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVA-------------GLTPLHIACRRK 338 (1011)
Q Consensus 282 ~~~~~~~----------~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~-------------g~t~L~~Aa~~g 338 (1011)
++++... +..|.||||+|+..|+.++|++|+++|+ +++..+.. |.||||+|+..|
T Consensus 70 ~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~ 147 (256)
T 2etb_A 70 KDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGA--DVHLRACGRFFQKHQGTCFYFGELPLSLAACTK 147 (256)
T ss_dssp HHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTT
T ss_pred CcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCC--CCCcccccccccccccccccCCCCHHHHHHHcC
Confidence 8776433 2349999999999999999999999999 78888776 999999999999
Q ss_pred cHHHHHHHHH---CCCCCccCCCCCCcHHHHHHH--cCChh-------HHHHHHhcCCCC-------CCC-CCCCcHHHH
Q psy8109 339 CLEIVKILLD---KGADINSGNDDGCTPLFCAIA--QNCLE-------VFNYLVNHGCDL-------SVP-EGERTALHM 398 (1011)
Q Consensus 339 ~~~iv~~Ll~---~ga~~n~~~~~g~t~L~~A~~--~g~~~-------iv~~Ll~~g~~~-------~~~-~~~~t~L~~ 398 (1011)
+.++|++|++ +|++++..|..|+||||+|+. .|+.+ ++++|+++|+++ +.. ..|.||||+
T Consensus 148 ~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~ 227 (256)
T 2etb_A 148 QWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKL 227 (256)
T ss_dssp CHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHH
T ss_pred CHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHH
Confidence 9999999999 999999999999999999999 78888 999999999998 655 778999999
Q ss_pred HHhcCCHHHHHHHHhcc
Q psy8109 399 ASQFGNLEMVNYLLKHI 415 (1011)
Q Consensus 399 Aa~~g~~~iv~~Ll~~~ 415 (1011)
|+..|+.+++++|++++
T Consensus 228 A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 228 AAKEGKIEIFRHILQRE 244 (256)
T ss_dssp HHHTTCHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHhCC
Confidence 99999999999999986
No 51
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=4.5e-30 Score=273.38 Aligned_cols=186 Identities=21% Similarity=0.212 Sum_probs=146.2
Q ss_pred CCCcHHHHHHHCCCHHH----HHHHHHHhcCCCccc----ccCCCccHHHHHHhC---CCHHHHHHHHHCCCCCCCC---
Q psy8109 719 YYMTPLHYASYRGDCND----IARFLVEECNADITL----RNFNNRTALNFAAFG---NNLDLLKFLLKAGADPDIL--- 784 (1011)
Q Consensus 719 ~~~t~l~~A~~~g~~~~----iv~~Ll~~~g~~~~~----~~~~g~t~L~~Aa~~---g~~~iv~~Ll~~gad~~~~--- 784 (1011)
+|.||||.|+..|+ .+ ++++|++. |++++. .+..|.||||+|+.. |+.++|++|++.|++++..
T Consensus 1 ~G~t~L~~A~~~g~-~~~v~~ll~~l~~~-g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 78 (256)
T 2etb_A 1 FDRDRLFSVVSRGV-PEELTGLLEYLRWN-SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL 78 (256)
T ss_dssp CCHHHHHHHHHHTC-GGGGTTHHHHHHHH-TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG
T ss_pred CCccHHHHHHHcCC-HHHHHHHHHHHHHc-CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh
Confidence 46788888888887 54 55666666 778777 777888888888887 8888888888887766533
Q ss_pred --------CcCCCCcccccccCChHHHHHHHHHcCCCccccccCC-------------CChHHHHHHHcCCHHHHHHHHh
Q psy8109 785 --------DLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKH-------------GSTALHTAAFHNQLDIIKLLLK 843 (1011)
Q Consensus 785 --------d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~-------------g~t~L~~Aa~~g~~~iv~~Ll~ 843 (1011)
|..|.||||+|+..|+.++|++|+++|++++. .+.. |.||||+|+..|+.++|++|++
T Consensus 79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 157 (256)
T 2etb_A 79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL-RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE 157 (256)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 35688888888888888888888888888776 3333 8888888888888888888888
Q ss_pred ---ccCCcccccCCCCCHHHHHHH--cCCHH-------HHHHHHhcCCCc-------ccccccCCCHHhhHHhhCCHHHH
Q psy8109 844 ---YNADINAEDKYGKIAFHSACQ--AKNWD-------IVTFLLDAGSNI-------EKATKYRMTFESSKVVEKHVAKL 904 (1011)
Q Consensus 844 ---~ga~in~~d~~g~taL~~A~~--~g~~~-------iv~~Ll~~ga~~-------~~~~~~g~t~l~~a~~~~~~~~~ 904 (1011)
+|+++|.+|..|+||||+|+. .++.+ ++++|+++|+++ +..|..|.||||+|+..|+.+++
T Consensus 158 ~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v 237 (256)
T 2etb_A 158 NPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIF 237 (256)
T ss_dssp CSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred ccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHH
Confidence 788888888888888888887 77777 888888888888 77888888888888888888888
Q ss_pred HHh
Q psy8109 905 RAA 907 (1011)
Q Consensus 905 ~~~ 907 (1011)
+.+
T Consensus 238 ~~L 240 (256)
T 2etb_A 238 RHI 240 (256)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 52
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=2.9e-29 Score=269.80 Aligned_cols=208 Identities=23% Similarity=0.280 Sum_probs=168.7
Q ss_pred CCCCcchHHHHHHHcCCHHHHHHHHH----CCCCCCcccCCCCCccccCCCCCChHHHHHHHc---CCHHHHHHHHHcCC
Q psy8109 210 SHSQGYKALCWALQEKKTDIAKLLVD----KGVPLNLVDKGVPLNYSRRIIETDTPLHSAILN---SDIELVKLLLEKGA 282 (1011)
Q Consensus 210 ~~~~g~t~L~~Aa~~G~~~iv~~Ll~----~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~---g~~~iv~~Ll~~g~ 282 (1011)
.+..|.|+||+||..|+.++|+.|++ .+++++.... .....|.||||+|+.. |+.++|++|++.|+
T Consensus 9 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~-------~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga 81 (273)
T 2pnn_A 9 PRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEF-------KDPETGKTCLLKAMLNLHNGQNDTIALLLDVAR 81 (273)
T ss_dssp --CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGG-------SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred CCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCccc-------ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhc
Confidence 46789999999999999998888886 4555542110 1123899999999987 99999999999987
Q ss_pred CCccc----------ccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCC--------------CCCCHHHHHHhcC
Q psy8109 283 NPLAI----------EKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNV--------------AGLTPLHIACRRK 338 (1011)
Q Consensus 283 ~~~~~----------~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~--------------~g~t~L~~Aa~~g 338 (1011)
++... .+..|.||||+|+..|+.++|++|+++|+ +++..+. .|.||||+|+..|
T Consensus 82 ~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g 159 (273)
T 2pnn_A 82 KTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGA--DVQAAANGDFFKKTKGRPGFYFGELPLSLAACTN 159 (273)
T ss_dssp HTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTT
T ss_pred cccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCC--CcCccccccccccccccccccCCCCHHHHHHHcC
Confidence 53211 12349999999999999999999999999 7888876 7999999999999
Q ss_pred cHHHHHHHHH---CCCCCccCCCCCCcHHHHHHHcCC---------hhHHHHHHhcCCCCCC--------CCCCCcHHHH
Q psy8109 339 CLEIVKILLD---KGADINSGNDDGCTPLFCAIAQNC---------LEVFNYLVNHGCDLSV--------PEGERTALHM 398 (1011)
Q Consensus 339 ~~~iv~~Ll~---~ga~~n~~~~~g~t~L~~A~~~g~---------~~iv~~Ll~~g~~~~~--------~~~~~t~L~~ 398 (1011)
+.++|++|++ +|++++..+..|.||||+|+..|+ .+++++|+++|++++. ...|.|||++
T Consensus 160 ~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~ 239 (273)
T 2pnn_A 160 QLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLAL 239 (273)
T ss_dssp CHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHH
T ss_pred CHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHH
Confidence 9999999999 999999999999999999999998 8999999999999863 3778999999
Q ss_pred HHhcCCHHHHHHHHhcc--CccCCCCCCCc
Q psy8109 399 ASQFGNLEMVNYLLKHI--NINHQDKDGWT 426 (1011)
Q Consensus 399 Aa~~g~~~iv~~Ll~~~--~~~~~~~~~~t 426 (1011)
|+..|+.+++++|+++| ++......+++
T Consensus 240 A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~ 269 (273)
T 2pnn_A 240 AASSGKIGVLAYILQREIHEPECRHAAAHH 269 (273)
T ss_dssp HHHTTCHHHHHHHHHHHTC-----------
T ss_pred HHHhChHHHHHHHHHCCCCCchhhhhhhhh
Confidence 99999999999999987 34444343333
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=3e-28 Score=259.98 Aligned_cols=196 Identities=22% Similarity=0.246 Sum_probs=169.5
Q ss_pred CCCcchHHHHHHHcCCHHH----HHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHH---HcCCHHHHHHHHHcCCC
Q psy8109 211 HSQGYKALCWALQEKKTDI----AKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAI---LNSDIELVKLLLEKGAN 283 (1011)
Q Consensus 211 ~~~g~t~L~~Aa~~G~~~i----v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~---~~g~~~iv~~Ll~~g~~ 283 (1011)
+..|+++|+.||+.|+.+. +++|++.|++++..+. .....|.||||.|+ ..|+.++|++|++.|++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~-------~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~ 74 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEF-------REPSTGKTCLPKALLNLSAGRNDTIPILLDIAEK 74 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGG-------SCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhh-------hccCCCCcHHHHHHHHhhcCCHHHHHHHHHhccc
Confidence 3568899999999999995 5555558998876652 11126999999999 77999999999998865
Q ss_pred Cccc----------ccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccC--------------CCCCCHHHHHHhcCc
Q psy8109 284 PLAI----------EKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQN--------------VAGLTPLHIACRRKC 339 (1011)
Q Consensus 284 ~~~~----------~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~--------------~~g~t~L~~Aa~~g~ 339 (1011)
+... .+..|+||||+|+..|+.++|++|+++|+ +++..+ ..|.||||+|+..|+
T Consensus 75 ~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~ 152 (260)
T 3jxi_A 75 TGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGA--DVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQ 152 (260)
T ss_dssp TTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTC
T ss_pred ccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCC--CcCccccccccCcccccccccCCCCHHHHHHHcCC
Confidence 3221 11149999999999999999999999999 788887 689999999999999
Q ss_pred HHHHHHHHH---CCCCCccCCCCCCcHHHHHHHcCC---------hhHHHHHHhcCCCC-------CCC-CCCCcHHHHH
Q psy8109 340 LEIVKILLD---KGADINSGNDDGCTPLFCAIAQNC---------LEVFNYLVNHGCDL-------SVP-EGERTALHMA 399 (1011)
Q Consensus 340 ~~iv~~Ll~---~ga~~n~~~~~g~t~L~~A~~~g~---------~~iv~~Ll~~g~~~-------~~~-~~~~t~L~~A 399 (1011)
.++|++|++ +|++++..|..|+||||+|+..|+ .+++++|+++|+++ +.. ..|.||||+|
T Consensus 153 ~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A 232 (260)
T 3jxi_A 153 PHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMA 232 (260)
T ss_dssp HHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHH
Confidence 999999999 999999999999999999999888 79999999999998 334 7789999999
Q ss_pred HhcCCHHHHHHHHhcc
Q psy8109 400 SQFGNLEMVNYLLKHI 415 (1011)
Q Consensus 400 a~~g~~~iv~~Ll~~~ 415 (1011)
+..|+.+++++|++++
T Consensus 233 ~~~g~~~~v~~Ll~~g 248 (260)
T 3jxi_A 233 AKTGKIGIFQHIIRRE 248 (260)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHhC
Confidence 9999999999999987
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=3.2e-28 Score=259.70 Aligned_cols=185 Identities=18% Similarity=0.177 Sum_probs=93.9
Q ss_pred CCcHHHHHHHCCCHHHH----HHHHHHhcCCCccccc----CCCccHHHHHH---hCCCHHHHHHHHHCCCC--------
Q psy8109 720 YMTPLHYASYRGDCNDI----ARFLVEECNADITLRN----FNNRTALNFAA---FGNNLDLLKFLLKAGAD-------- 780 (1011)
Q Consensus 720 ~~t~l~~A~~~g~~~~i----v~~Ll~~~g~~~~~~~----~~g~t~L~~Aa---~~g~~~iv~~Ll~~gad-------- 780 (1011)
+.++||.|+..|+ .+. +++|++. +++++..+ ..|.||||+|+ ..|+.++|++|++.|++
T Consensus 5 ~~~~L~~A~~~g~-~~~v~~ll~~l~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 82 (260)
T 3jxi_A 5 NRPILFDIVSRGS-PDGLEGLLSFLLTH-KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI 82 (260)
T ss_dssp CHHHHHHHHHHTC-GGGGTTHHHHHHHH-TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHhCC-HHHHHHHHHHHHhc-CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence 4455555555555 342 2222223 44444433 33555555555 34555555555554422
Q ss_pred ---CCCCCcCCCCcccccccCChHHHHHHHHHcCCCcccccc-------------CCCChHHHHHHHcCCHHHHHHHHh-
Q psy8109 781 ---PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTI-------------KHGSTALHTAAFHNQLDIIKLLLK- 843 (1011)
Q Consensus 781 ---~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~-------------~~g~t~L~~Aa~~g~~~iv~~Ll~- 843 (1011)
++..|..|.||||+|+..|+.++|++|+++|++++.... ..|.||||+|+..|+.++|++|++
T Consensus 83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 162 (260)
T 3jxi_A 83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN 162 (260)
T ss_dssp TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 222333455555555555555555555555555554211 345555555555555555555555
Q ss_pred --ccCCcccccCCCCCHHHHHHHcCC---------HHHHHHHHhcCCCc-------ccccccCCCHHhhHHhhCCHHHHH
Q psy8109 844 --YNADINAEDKYGKIAFHSACQAKN---------WDIVTFLLDAGSNI-------EKATKYRMTFESSKVVEKHVAKLR 905 (1011)
Q Consensus 844 --~ga~in~~d~~g~taL~~A~~~g~---------~~iv~~Ll~~ga~~-------~~~~~~g~t~l~~a~~~~~~~~~~ 905 (1011)
+|++++.+|..|+||||+|+..++ .+++++|+++|+++ +..|..|+||||+|+..|+.++++
T Consensus 163 ~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 242 (260)
T 3jxi_A 163 GHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ 242 (260)
T ss_dssp SSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred cccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence 555555555555555555555444 45555555555555 445555555555555555555554
Q ss_pred H
Q psy8109 906 A 906 (1011)
Q Consensus 906 ~ 906 (1011)
.
T Consensus 243 ~ 243 (260)
T 3jxi_A 243 H 243 (260)
T ss_dssp H
T ss_pred H
Confidence 4
No 55
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=8.6e-28 Score=238.59 Aligned_cols=170 Identities=22% Similarity=0.228 Sum_probs=153.9
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109 720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG 799 (1011)
Q Consensus 720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g 799 (1011)
+.+|||.|+..|+ .+++++|++..+..++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGE-LDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTC-HHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCC-HHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCC
Confidence 4689999999999 999999999844458999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy8109 800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS 879 (1011)
Q Consensus 800 ~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga 879 (1011)
+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 81 ~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (172)
T 3v30_A 81 YTDIVGLLLERDVDINI-YDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHIL 159 (172)
T ss_dssp CHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHH
Confidence 99999999999999997 77899999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCH
Q psy8109 880 NIEKATKYRMTF 891 (1011)
Q Consensus 880 ~~~~~~~~g~t~ 891 (1011)
++...+..|.||
T Consensus 160 ~~~~~~~~~~~p 171 (172)
T 3v30_A 160 KLFQSNLVPADP 171 (172)
T ss_dssp HHSCC-------
T ss_pred HHhcccCCCCCC
Confidence 998888888776
No 56
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=8.7e-27 Score=230.42 Aligned_cols=161 Identities=33% Similarity=0.457 Sum_probs=142.8
Q ss_pred CCCCCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q psy8109 209 LSHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIE 288 (1011)
Q Consensus 209 ~~~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~ 288 (1011)
.....+.++|++||..|+.++|++|++.|++++..+. .|.||||.|+..|+.++|++|+++|++++..+
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 77 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDA-----------SGWTPLHLAAFNGHLEIVEVLLKNGADVNAVD 77 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCC-----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC
Confidence 3456678999999999999999999999999887776 78899999999999999999999999988777
Q ss_pred cCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHH
Q psy8109 289 KSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAI 368 (1011)
Q Consensus 289 ~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~ 368 (1011)
.. |.||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+
T Consensus 78 ~~-g~t~L~~A~~~~~~~~~~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 154 (169)
T 2y1l_E 78 HA-GMTPLRLAALFGHLEIVEVLLKNGA--DVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISI 154 (169)
T ss_dssp TT-SCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CC-CCCHHHHHHHcCCHHHHHHHHHcCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 66 8999999999999999999999998 78888999999999999999999999999999999999999999999999
Q ss_pred HcCChhHHHHHHhcC
Q psy8109 369 AQNCLEVFNYLVNHG 383 (1011)
Q Consensus 369 ~~g~~~iv~~Ll~~g 383 (1011)
..|+.+++++|++.|
T Consensus 155 ~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 155 DNGNEDLAEILQKLN 169 (169)
T ss_dssp HTTCHHHHHHHHTC-
T ss_pred HhCCHHHHHHHHHcC
Confidence 999999999998876
No 57
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=1.1e-29 Score=281.94 Aligned_cols=278 Identities=12% Similarity=0.123 Sum_probs=181.5
Q ss_pred cchHHHHHHH-cCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCc---cccc
Q psy8109 214 GYKALCWALQ-EKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPL---AIEK 289 (1011)
Q Consensus 214 g~t~L~~Aa~-~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~---~~~~ 289 (1011)
+.+++++|+. .++.+++++|+++|++ +.||||.|+..|+.++|++|++.|+... ..+.
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~g~~------------------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~ 126 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKKGIK------------------SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQA 126 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHHTCC------------------HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHcCCC------------------cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhcc
Confidence 4567888877 5788999999988764 4599999999999999999999988321 1222
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCC-CcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCcc--CCCCCCcHHHH
Q psy8109 290 SRNRTALHVAAIVESVDIVKLLFDYGAEKS-VNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINS--GNDDGCTPLFC 366 (1011)
Q Consensus 290 ~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~-~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~--~~~~g~t~L~~ 366 (1011)
.|.||||+||..|+.++|++|+++|++.. .+..+.+ .||||+||..|+.++|++|+++|++++. .+..|.||||+
T Consensus 127 -~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~ 204 (376)
T 2aja_A 127 -ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRW 204 (376)
T ss_dssp -HHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHH
Confidence 27789999999999999999999997311 1222233 8999999999999999999999999877 78889999999
Q ss_pred HH-HcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcc-CccCCCCCCCcHhHHHHhcCCCHH-----
Q psy8109 367 AI-AQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHI-NINHQDKDGWTPLTCSIKGQASLE----- 439 (1011)
Q Consensus 367 A~-~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~----- 439 (1011)
|+ ..|+.++|++|+++|+. +.|||+.|+..|+.+++++|++++ +++..+ ++++.|... ++++
T Consensus 205 Aa~~~G~~eiv~~Ll~~ga~------~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~----~~l~~A~~~-g~~~vv~~~ 273 (376)
T 2aja_A 205 AAVGRGHHNVINFLLDCPVM------LAYAEIHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPD-GVFDLVTKS 273 (376)
T ss_dssp HHSTTCCHHHHHHHTTSHHH------HHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH----TTTTTTSSS-SCCCCSSHH
T ss_pred HHHHCCCHHHHHHHHhCCCc------cchHHHHHHHCCCHHHHHHHHhcCccccccc----HHHHHHHHC-CChhhhcHH
Confidence 99 99999999999998753 579999999999999999999886 333222 122222211 1222
Q ss_pred -------HHHHHHHcCCCcccccCCCChHHHHHHHcCCHHHHHHHHhcc------CCCCCCCCCCcHHHHHHHcCCHHHH
Q psy8109 440 -------VFHSIIEAGADIKAKLMDGTTALHLACYFGNLAMVNYLVKHI------DINSENDLGKTPIYFAIKNNHLEIF 506 (1011)
Q Consensus 440 -------i~~~Ll~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~------~~~~~~~~g~t~L~~A~~~g~~~iv 506 (1011)
+++.|+..+. .+..+.+++|++.. ........+.+||++|+..|+.+++
T Consensus 274 ~~~~~~~~~~~li~~~~------------------~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v 335 (376)
T 2aja_A 274 ECLQGFYMLRNLIRRND------------------EVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGAC 335 (376)
T ss_dssp HHHHHHHHHHHHHHHCC------------------GGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHH
T ss_pred hhhhhHHHHHHHHHcch------------------hhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHH
Confidence 2233333321 12355666666511 0111222345667777777777777
Q ss_pred HHHHhcCcccccccCCCCCHHHHHHHhCCHHHHHHHH
Q psy8109 507 NLLLKLGADVAVKMKSNFTCLHVACEFASIEMVSFLL 543 (1011)
Q Consensus 507 ~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll 543 (1011)
++|++.| ...+..+.|++..|-..|+.++.+.-+
T Consensus 336 ~lLl~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (376)
T 2aja_A 336 ALLLSIP---SVLALTKANNYYINETGGRLDLRAVAL 369 (376)
T ss_dssp HHHTTSH---HHHHSCC--------------------
T ss_pred HHHHcCh---HHHHHHHHhccccccccccccHHHHHH
Confidence 7777643 345556666666666666666655443
No 58
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=1.2e-27 Score=256.94 Aligned_cols=186 Identities=23% Similarity=0.258 Sum_probs=172.4
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHHhcCCC--cccccCCCccHHHHHHhCCCHHHHHHHHHCCC-CCCCCCcCCCCcccccc
Q psy8109 720 YMTPLHYASYRGDCNDIARFLVEECNAD--ITLRNFNNRTALNFAAFGNNLDLLKFLLKAGA-DPDILDLKDTSPLLSSC 796 (1011)
Q Consensus 720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~--~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga-d~~~~d~~g~t~L~~A~ 796 (1011)
..+++|.|+..++ .+.++.++.. +.+ +|..|..|.||||+|+..|+.++|++|++.|+ +++..+..|.||||+|+
T Consensus 76 ~~~~l~~a~~~~~-~~~~~~l~~~-~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~ 153 (276)
T 4hbd_A 76 CRSDAHPELVRRH-LVTFRAMSAR-LLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTA 153 (276)
T ss_dssp HSTTCCHHHHHHH-HHHHHHHCHH-HHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGG
T ss_pred hccCCCHHHHHHH-HHHHHHHHHH-HHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHH
Confidence 4567888888888 7888888765 444 78899999999999999999999999999998 99999999999999999
Q ss_pred -----cCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHH
Q psy8109 797 -----RQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIV 871 (1011)
Q Consensus 797 -----~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv 871 (1011)
..++.+++++|++.|..++. .+..|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|+.++|
T Consensus 154 ~~~~~~~~~~~~v~~Ll~~g~~~~~-~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv 232 (276)
T 4hbd_A 154 LATLKTQDDIETVLQLFRLGNINAK-ASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIA 232 (276)
T ss_dssp GCCCCSHHHHHHHHHHHHHSCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHhhhhhhHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence 67899999999999988876 778899999999999999999999999999999999999999999999999999
Q ss_pred HHHHh-cCCCcccccccCCCHHhhHHhhCCHHHHHHhh
Q psy8109 872 TFLLD-AGSNIEKATKYRMTFESSKVVEKHVAKLRAAN 908 (1011)
Q Consensus 872 ~~Ll~-~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~ 908 (1011)
++|++ .|++++..|..|.|||++|+..|+.++++.+-
T Consensus 233 ~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll 270 (276)
T 4hbd_A 233 GLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLY 270 (276)
T ss_dssp HHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999 89999999999999999999999999998763
No 59
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=6e-30 Score=284.00 Aligned_cols=272 Identities=15% Similarity=0.090 Sum_probs=186.4
Q ss_pred CHHHHHHH-cCChhhHHHHHhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCCCc---ccCCCCCCcHHHHHHHcC
Q psy8109 588 SPLHLACA-TGNMDMITYAMKYFDVNIENDIGETPLHVAVSHGCLEAVKFLLNTKNIDV---NHKTKDGSTALFFACYDK 663 (1011)
Q Consensus 588 t~l~~A~~-~g~~~iv~~Ll~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~g~~~---~~~~~~g~t~L~~A~~~g 663 (1011)
+.++.+.. .++.++++++... +..+.||||.|+..|+.+++++|++ .|+.. +..+..+.||||+|+..|
T Consensus 67 l~~~~a~~~~~~~~~~~~l~~~------g~~~~T~Lh~Aa~~G~~e~v~~Ll~-~ga~~~~~~~~~~~~~tpL~~Aa~~G 139 (376)
T 2aja_A 67 LCLYYAHYNRNAKQLWSDAHKK------GIKSEVICFVAAITGCSSALDTLCL-LLTSDEIVKVIQAENYQAFRLAAENG 139 (376)
T ss_dssp HHHHHHHTTTTCTTHHHHHHHH------TCCHHHHHHHHHHHCCHHHHHHHTT-C--CCSSCC--CHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCHHHHHHHHHc------CCCcCCHHHHHHHcCCHHHHHHHHH-cCCcHHHHHHhccCCCCHHHHHHHcC
Confidence 34555554 4566777777652 1234589999999999999999988 56522 233445678999999999
Q ss_pred CHHHHHHHHHCCCCC---cCCCCCCcHHHHHHHcCCCHHHHHHHHhCCCCCCc--cCCCCCCCcHHHHHH-HCCCHHHHH
Q psy8109 664 RLDLVEILLEANADV---NLGDGTYTPLYTALMKDPSLDIIKMLVKYGADVNL--TNEACYYMTPLHYAS-YRGDCNDIA 737 (1011)
Q Consensus 664 ~~~iv~~Ll~~ga~~---~~~~~~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~--~~~~~~~~t~l~~A~-~~g~~~~iv 737 (1011)
+.+++++|+++|+++ +......||||.|+. .|+.+++++|+++|++++. .+.. |.||||+|+ ..|+ .+++
T Consensus 140 ~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~-~G~~eiv~~Ll~~ga~~~~~~~d~~--g~TpL~~Aa~~~G~-~eiv 215 (376)
T 2aja_A 140 HLHVLNRLCELAPTEIMAMIQAENYHAFRLAAE-NGHLHVLNRLCELAPTEATAMIQAE--NYYAFRWAAVGRGH-HNVI 215 (376)
T ss_dssp CHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHH-TTCHHHHHHHHHSCGGGHHHHHHHH--HHHHHHHHHSTTCC-HHHH
T ss_pred CHHHHHHHHhCCCCccccccCCCCCCHHHHHHH-CCCHHHHHHHHHcCCccchhccCCC--CCCHHHHHHHHCCC-HHHH
Confidence 999999999998752 222223788888888 8888888888888888765 5555 889999999 9999 9999
Q ss_pred HHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHH------------H
Q psy8109 738 RFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIV------------D 805 (1011)
Q Consensus 738 ~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv------------~ 805 (1011)
++|++. |+ .|.|||+.|+..|+.+++++|+++|++++..+ ++++.|+..|+.+++ +
T Consensus 216 ~~Ll~~-ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~ 283 (376)
T 2aja_A 216 NFLLDC-PV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFDLVTKSECLQGFYMLR 283 (376)
T ss_dssp HHHTTS-HH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHH
T ss_pred HHHHhC-CC-------ccchHHHHHHHCCCHHHHHHHHhcCccccccc----HHHHHHHHCCChhhhcHHhhhhhHHHHH
Confidence 999885 43 27899999999999999999999998876655 588889988887743 4
Q ss_pred HHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHh---------ccCCcccccCCCCCHHHHHHHcCCHHHHHHHHh
Q psy8109 806 TLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLK---------YNADINAEDKYGKIAFHSACQAKNWDIVTFLLD 876 (1011)
Q Consensus 806 ~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~---------~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~ 876 (1011)
.|+..+. .+..+.+++|++ .|+++| .+.|||++|+..|+.++|++|++
T Consensus 284 ~li~~~~-------------------~~~~~~~~~Ll~~~~vk~l~~~g~~~n----~~~~~L~~A~~~g~~e~v~lLl~ 340 (376)
T 2aja_A 284 NLIRRND-------------------EVLLDDIRFLLSIPGIKALAPTATIPG----DANELLRLALRLGNQGACALLLS 340 (376)
T ss_dssp HHHHHCC-------------------GGGHHHHHHHHTSTTTGGGSSCCSSTT----CCCHHHHHHHHHTCTTHHHHHTT
T ss_pred HHHHcch-------------------hhHHHHHHHHHhChhhhhhhccCCCCC----CccHHHHHHHHcCcHHHHHHHHc
Confidence 4444431 123556666665 455554 45689999999999999999998
Q ss_pred cCCCcccccccCCCHHhhHHhhCCHHHHHHhh
Q psy8109 877 AGSNIEKATKYRMTFESSKVVEKHVAKLRAAN 908 (1011)
Q Consensus 877 ~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~ 908 (1011)
.| ...+..+.|++.+|...|+.++.+...
T Consensus 341 ~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (376)
T 2aja_A 341 IP---SVLALTKANNYYINETGGRLDLRAVAL 369 (376)
T ss_dssp SH---HHHHSCC--------------------
T ss_pred Ch---HHHHHHHHhccccccccccccHHHHHH
Confidence 75 667788999999999999999887643
No 60
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=3.1e-27 Score=239.23 Aligned_cols=159 Identities=19% Similarity=0.204 Sum_probs=134.5
Q ss_pred cccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHH
Q psy8109 748 ITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALH 827 (1011)
Q Consensus 748 ~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~ 827 (1011)
++.+|..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++. .+..|.||||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~ 106 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT-KDFSGKTPLM 106 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTSCCHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHH
Confidence 456777888888888888888888888888888888888888888888888888888888888888886 6778888888
Q ss_pred HHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHh
Q psy8109 828 TAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAA 907 (1011)
Q Consensus 828 ~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~ 907 (1011)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.||+++|+..|+.++++.+
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~L 186 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIF 186 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHH
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888888888765
No 61
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=3.9e-27 Score=231.32 Aligned_cols=157 Identities=27% Similarity=0.415 Sum_probs=136.7
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109 720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG 799 (1011)
Q Consensus 720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g 799 (1011)
..|||+.|+..|+ .+++++|++. |++++..+..|.||||+|+. |+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 5 ~~~~L~~A~~~g~-~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 5 WGNELASAAARGD-LEQLTSLLQN-NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp CHHHHHHHHHHTC-HHHHHHHTTS-CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HhhHHHHHHHcCC-HHHHHHHHhC-CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 5688888888888 8888888887 88888888888999998888 8899999999999888888888899999999999
Q ss_pred hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCC-cccccCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy8109 800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNAD-INAEDKYGKIAFHSACQAKNWDIVTFLLDAG 878 (1011)
Q Consensus 800 ~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~-in~~d~~g~taL~~A~~~g~~~iv~~Ll~~g 878 (1011)
+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 82 ~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNI-EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp CHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred CHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 99999999998888887 777888999999999999999999988887 5888888999999999999999999999888
Q ss_pred CC
Q psy8109 879 SN 880 (1011)
Q Consensus 879 a~ 880 (1011)
||
T Consensus 161 Ad 162 (162)
T 1ihb_A 161 AG 162 (162)
T ss_dssp --
T ss_pred CC
Confidence 75
No 62
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=5.4e-27 Score=231.55 Aligned_cols=159 Identities=25% Similarity=0.296 Sum_probs=125.3
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109 720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG 799 (1011)
Q Consensus 720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g 799 (1011)
|.||||.|+..|+ .+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 3 ~~t~L~~A~~~g~-~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 3 NSLSVHQLAAQGE-MLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TCCCHHHHHHTTC-HHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CcchHHHHHHCCC-HHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 6778888888887 7788888777 7777777778888888888888888888888888888777777778888888888
Q ss_pred hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy8109 800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS 879 (1011)
Q Consensus 800 ~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga 879 (1011)
+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.+++++|+++++
T Consensus 81 ~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNE-YDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp CHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence 88888888888777776 66777788888888888888888887788777777778888888888888888888877765
Q ss_pred Cc
Q psy8109 880 NI 881 (1011)
Q Consensus 880 ~~ 881 (1011)
++
T Consensus 160 ~~ 161 (167)
T 3v31_A 160 KL 161 (167)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 63
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=1.2e-26 Score=229.29 Aligned_cols=156 Identities=36% Similarity=0.518 Sum_probs=113.3
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109 720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG 799 (1011)
Q Consensus 720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g 799 (1011)
+.++++.|+..|+ .+++++|++. |++++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 14 ~~~~l~~A~~~g~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 91 (169)
T 2y1l_E 14 LGKKLLEAARAGR-DDEVRILMAN-GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFG 91 (169)
T ss_dssp HHHHHHHHHHHTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred ccchHHHHHHcCC-HHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 4567777777777 7777777776 7777777777777777777777777777777777777777777777777777777
Q ss_pred hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy8109 800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAG 878 (1011)
Q Consensus 800 ~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~g 878 (1011)
+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|++.|
T Consensus 92 ~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 92 HLEIVEVLLKNGADVNA-NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 77777777777777765 5666777777777777777777777777777777777777777777777777777777665
No 64
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=3e-27 Score=253.74 Aligned_cols=189 Identities=25% Similarity=0.375 Sum_probs=173.6
Q ss_pred cchHHHHHHHcCCHHHHHHHHHCCCC--CCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCC-CCcccccC
Q psy8109 214 GYKALCWALQEKKTDIAKLLVDKGVP--LNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGA-NPLAIEKS 290 (1011)
Q Consensus 214 g~t~L~~Aa~~G~~~iv~~Ll~~g~~--~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~~~~ 290 (1011)
+.+++|.|+..|+++.++.+++.+.+ +|..+. .|.||||+|+..|+.++|++|++.|+ +++..+..
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~-----------~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~ 144 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADS-----------NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRA 144 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTT
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCC-----------CCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCC
Confidence 45778999999999999999887665 666665 89999999999999999999999998 77776665
Q ss_pred CCCcHHHHHH-----HhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHH
Q psy8109 291 RNRTALHVAA-----IVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLF 365 (1011)
Q Consensus 291 ~g~t~L~~Aa-----~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~ 365 (1011)
|.|||++|+ ..|+.+++++|++.|. ..+..+..|.||||+|+..|+.++|++|+++|+++|..|..|.||||
T Consensus 145 -g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~--~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh 221 (276)
T 4hbd_A 145 -GYSPIMLTALATLKTQDDIETVLQLFRLGN--INAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALM 221 (276)
T ss_dssp -SCCHHHHGGGCCCCSHHHHHHHHHHHHHSC--TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred -CCCHHHHHHHHHhhhhhhHHHHHHHHHcCC--CccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence 999999999 7799999999999998 67888899999999999999999999999999999999999999999
Q ss_pred HHHHcCChhHHHHHHh-cCCCCCCC-CCCCcHHHHHHhcCCHHHHHHHHhccC
Q psy8109 366 CAIAQNCLEVFNYLVN-HGCDLSVP-EGERTALHMASQFGNLEMVNYLLKHIN 416 (1011)
Q Consensus 366 ~A~~~g~~~iv~~Ll~-~g~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll~~~~ 416 (1011)
+|+..|+.++|++|++ .|++++.. ..|.|||++|+..|+.+++++|+++.+
T Consensus 222 ~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 222 CACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred HHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 9999999999999999 89999987 788999999999999999999998753
No 65
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=1.1e-26 Score=235.11 Aligned_cols=160 Identities=29% Similarity=0.271 Sum_probs=141.5
Q ss_pred CCCCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q psy8109 210 SHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEK 289 (1011)
Q Consensus 210 ~~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~ 289 (1011)
.+..|+||||+||..|+.+++++|++.|++++..+. .|.||||.|+..|+.++|++|+++|++++..+.
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 99 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDI-----------EGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF 99 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccc-----------cCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 467888999999999999999999998888877766 788999999999999999999999988887766
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHH
Q psy8109 290 SRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIA 369 (1011)
Q Consensus 290 ~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~ 369 (1011)
. |.||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+.
T Consensus 100 ~-g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 176 (192)
T 2rfm_A 100 S-GKTPLMWSIIFGYSEMSYFLLEHGA--NVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARI 176 (192)
T ss_dssp T-SCCHHHHHHHHTCHHHHHHHHHTTC--CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred C-CCcHHHHHHHcCCHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 5 8899999999999999999999988 788888889999999999999999999999999999888899999999999
Q ss_pred cCChhHHHHHHhcC
Q psy8109 370 QNCLEVFNYLVNHG 383 (1011)
Q Consensus 370 ~g~~~iv~~Ll~~g 383 (1011)
.|+.+++++|+++|
T Consensus 177 ~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 177 FGRQEVIKIFTEVR 190 (192)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred hCcHHHHHHHHhcc
Confidence 99999999988765
No 66
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.5e-29 Score=262.86 Aligned_cols=200 Identities=17% Similarity=0.124 Sum_probs=171.6
Q ss_pred HHHHhCCCCCCccCCC-CCCCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCC
Q psy8109 702 KMLVKYGADVNLTNEA-CYYMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGAD 780 (1011)
Q Consensus 702 ~~Ll~~g~~~~~~~~~-~~~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad 780 (1011)
+.|++.|++++..+.. ..+.||||+|+..|+ .+++++|++. |++++..+..|.||||+|+..|+.+++++|++.|++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~-~~~v~~Ll~~-g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGE-LEVVQQAVKE-MNDPSQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTC-HHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCC-HHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 4566777766644332 236789999999999 9999999998 999999999999999999999999999999999999
Q ss_pred CCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHH--HHcCCHHHHHHHHhccCCcccccCCCCCH
Q psy8109 781 PDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTA--AFHNQLDIIKLLLKYNADINAEDKYGKIA 858 (1011)
Q Consensus 781 ~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~A--a~~g~~~iv~~Ll~~ga~in~~d~~g~ta 858 (1011)
++..|..|.||||+|+..|+.++|++|+++|++++...+..|+||||+| +..|+.+++++|+++|++++.+|..|.||
T Consensus 80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~ 159 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYA 159 (229)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEE
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHH
Confidence 9999999999999999999999999999999999985557999999999 99999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCC--cccccccCCCHHhhHHhhCCHHHHHH
Q psy8109 859 FHSACQAKNWDIVTFLLDAGSN--IEKATKYRMTFESSKVVEKHVAKLRA 906 (1011)
Q Consensus 859 L~~A~~~g~~~iv~~Ll~~ga~--~~~~~~~g~t~l~~a~~~~~~~~~~~ 906 (1011)
++.++..+ .+++|++.|++ ++.+|..|+|||++|++.|+.++++.
T Consensus 160 l~~~~~~~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 160 LWDYSAEF---GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp SSCBCCSS---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred HHHHhhcc---ccccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 99665554 33688899998 67789999999999999999998865
No 67
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=1.3e-26 Score=227.45 Aligned_cols=158 Identities=25% Similarity=0.307 Sum_probs=138.1
Q ss_pred CcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q psy8109 213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRN 292 (1011)
Q Consensus 213 ~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g 292 (1011)
...|+|++|+..|+.+++++|++.|++++..+. .|.||||.|+. |+.++|++|+++|++++..+.. |
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-----------~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~-g 70 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNG-----------FGRTALQVMKL-GNPEIARRLLLRGANPDLKDRT-G 70 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCT-----------TSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTT-S
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCc-----------cCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCC-C
Confidence 356899999999999999999999988887766 78899999988 9999999999999988877666 8
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCC-CccCCCCCCcHHHHHHHcC
Q psy8109 293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGAD-INSGNDDGCTPLFCAIAQN 371 (1011)
Q Consensus 293 ~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~-~n~~~~~g~t~L~~A~~~g 371 (1011)
.||||+|+..|+.+++++|+++|+ +++.++..|.||||+|+..|+.+++++|+++|++ ++..+..|.|||++|+..|
T Consensus 71 ~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 148 (162)
T 1ihb_A 71 FAVIHDAARAGFLDTLQTLLEFQA--DVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG 148 (162)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcC
Confidence 999999999999999999999988 7888889999999999999999999999999988 5888888999999999999
Q ss_pred ChhHHHHHHhcCCC
Q psy8109 372 CLEVFNYLVNHGCD 385 (1011)
Q Consensus 372 ~~~iv~~Ll~~g~~ 385 (1011)
+.+++++|+++|++
T Consensus 149 ~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 149 RNEVVSLMQANGAG 162 (162)
T ss_dssp CHHHHHHHHHTC--
T ss_pred CHHHHHHHHHhCCC
Confidence 99999999998875
No 68
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=2.2e-26 Score=227.14 Aligned_cols=159 Identities=28% Similarity=0.336 Sum_probs=116.7
Q ss_pred CcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q psy8109 213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRN 292 (1011)
Q Consensus 213 ~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g 292 (1011)
.|.||||+||..|+.+++++|++.|++++..+. .|.||||.|+..|+.++|++|+++|++++..+.. |
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g 69 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDE-----------EGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKG-R 69 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-C
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCC-----------CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCC-C
Confidence 356777777777777777777777777666655 6777777777777777777777777777666554 7
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCC
Q psy8109 293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNC 372 (1011)
Q Consensus 293 ~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~ 372 (1011)
.||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 147 (167)
T 3v31_A 70 ESALSLACSKGYTDIVKMLLDCGV--DVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY 147 (167)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCC--CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc
Confidence 777777777777777777777776 667777777777777777777777777777777777777777777777777777
Q ss_pred hhHHHHHHhcCCC
Q psy8109 373 LEVFNYLVNHGCD 385 (1011)
Q Consensus 373 ~~iv~~Ll~~g~~ 385 (1011)
.+++++|++++.+
T Consensus 148 ~~~~~~L~~~~~~ 160 (167)
T 3v31_A 148 RSVQQVIESHLLK 160 (167)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777777776544
No 69
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=1.5e-26 Score=229.52 Aligned_cols=160 Identities=32% Similarity=0.367 Sum_probs=115.9
Q ss_pred chHHHHHHHcCCHHHHHHHHHCCCC-CCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCC
Q psy8109 215 YKALCWALQEKKTDIAKLLVDKGVP-LNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNR 293 (1011)
Q Consensus 215 ~t~L~~Aa~~G~~~iv~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~ 293 (1011)
.|+||+||..|+.+++++|++.|.+ ++..+. .|.||||.|+..|+.++|++|+++|++++..+.. |.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~ 70 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDE-----------RGFTPLIWASAFGEIETVRFLLEWGADPHILAKE-RE 70 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT-CC
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCC-----------CCCCHHHHHHHcCCHHHHHHHHHcCCCchhhccc-CC
Confidence 4677777777777777777777655 444443 6777777777777777777777777777666555 77
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCh
Q psy8109 294 TALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCL 373 (1011)
Q Consensus 294 t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~ 373 (1011)
||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 148 (172)
T 3v30_A 71 SALSLASTGGYTDIVGLLLERDV--DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYR 148 (172)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CHHHHHHHCCCHHHHHHHHHcCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcH
Confidence 77777777777777777777777 6677777777777777777777777777777777777777777777777777777
Q ss_pred hHHHHHHhcCCCCCC
Q psy8109 374 EVFNYLVNHGCDLSV 388 (1011)
Q Consensus 374 ~iv~~Ll~~g~~~~~ 388 (1011)
+++++|+++|+++..
T Consensus 149 ~~~~~L~~~~~~~~~ 163 (172)
T 3v30_A 149 KVQQVIENHILKLFQ 163 (172)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhc
Confidence 777777777665543
No 70
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=8.2e-27 Score=233.07 Aligned_cols=167 Identities=22% Similarity=0.334 Sum_probs=158.2
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109 720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG 799 (1011)
Q Consensus 720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g 799 (1011)
+.++|+.|+..|+ .+++++|++..+.+++..+..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 5 ~~~~l~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 5 FMDDIFTQCREGN-AVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp --CCHHHHHHHTC-HHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHcCC-HHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 7799999999999 999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy8109 800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS 879 (1011)
Q Consensus 800 ~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga 879 (1011)
+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|+++|+
T Consensus 84 ~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~ 162 (179)
T 3f6q_A 84 HRDIVQKLLQYKADINA-VNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQ 162 (179)
T ss_dssp CHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999998 78899999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccC
Q psy8109 880 NIEKATKYR 888 (1011)
Q Consensus 880 ~~~~~~~~g 888 (1011)
+++..+..+
T Consensus 163 ~~~~~~~~~ 171 (179)
T 3f6q_A 163 NLNRIPYKD 171 (179)
T ss_dssp CCSCBCCCC
T ss_pred CcccCCccc
Confidence 998766443
No 71
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=1.8e-26 Score=224.00 Aligned_cols=151 Identities=25% Similarity=0.296 Sum_probs=122.4
Q ss_pred CccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCC
Q psy8109 755 NRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQ 834 (1011)
Q Consensus 755 g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~ 834 (1011)
..|+|+.|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.+++++|+++|++++. .+..|+||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA-RTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-CCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCh
Confidence 3567888888888888888888887765 466778888888888888888888888888776 66778888888888888
Q ss_pred HHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHHHh
Q psy8109 835 LDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLRAA 907 (1011)
Q Consensus 835 ~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~ 907 (1011)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.||+++|+..|+.++++.+
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 8888888888888888888888888888888888888888888888888888888888888888888877654
No 72
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=1.2e-25 Score=218.21 Aligned_cols=151 Identities=28% Similarity=0.363 Sum_probs=111.3
Q ss_pred cchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCC
Q psy8109 214 GYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNR 293 (1011)
Q Consensus 214 g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~ 293 (1011)
..++|+.|+..|+.+++++|++.|++++. +. .|.||||.|+..|+.++|++|++.|++++..+.. |.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~ 68 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFTT-DW-----------LGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKV-DR 68 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCCC-CT-----------TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT-CC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCCc-CC-----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CC
Confidence 34677777777777777777777776542 22 5677777777777777777777777777666555 77
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCh
Q psy8109 294 TALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCL 373 (1011)
Q Consensus 294 t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~ 373 (1011)
||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.
T Consensus 69 t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 146 (153)
T 1awc_B 69 TPLHMAASEGHANIVEVLLKHGA--DVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNE 146 (153)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CHHHHHHHcChHHHHHHHHHcCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH
Confidence 77777777777777777777777 6677777777777777777777777777777777777777777777777777777
Q ss_pred hHHHHH
Q psy8109 374 EVFNYL 379 (1011)
Q Consensus 374 ~iv~~L 379 (1011)
+++++|
T Consensus 147 ~i~~~L 152 (153)
T 1awc_B 147 DLAEIL 152 (153)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 777765
No 73
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=2.1e-26 Score=226.85 Aligned_cols=157 Identities=27% Similarity=0.310 Sum_probs=130.1
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109 720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG 799 (1011)
Q Consensus 720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g 799 (1011)
+.|||+.|+..|+ .+++++|++..+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 8 ~~~~l~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 86 (165)
T 3twr_A 8 ADRQLLEAAKAGD-VETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYG 86 (165)
T ss_dssp HHHHHHHHHHHTC-HHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred hhHHHHHHHHhCC-HHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcC
Confidence 6788888888888 888888888667777777888888888888888888888888888888888888888888888888
Q ss_pred hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy8109 800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGS 879 (1011)
Q Consensus 800 ~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga 879 (1011)
+.+++++|+++|++++. .+..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+. |+.+++++|+++||
T Consensus 87 ~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 87 HYEVAELLVKHGAVVNV-ADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred cHHHHHHHHhCCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 88888888888888886 67788888888888888888888888888888888888888888766 78888888888775
No 74
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=3.3e-28 Score=252.83 Aligned_cols=197 Identities=18% Similarity=0.129 Sum_probs=157.1
Q ss_pred HHHHHCCCCCcCCCC----CCcHHHHHHHcCCCHHHHHHHHhCCCCCCccCCCCCCCcHHHHHHHCCCHHHHHHHHHHhc
Q psy8109 669 EILLEANADVNLGDG----TYTPLYTALMKDPSLDIIKMLVKYGADVNLTNEACYYMTPLHYASYRGDCNDIARFLVEEC 744 (1011)
Q Consensus 669 ~~Ll~~ga~~~~~~~----~~t~L~~aa~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~t~l~~A~~~g~~~~iv~~Ll~~~ 744 (1011)
+.|+++|++++..+. +.|||+.|+. .|+.+++++|++.|++++..+.. |.||||+|+..|+ .+++++|++.
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~~d~~--g~tpLh~A~~~g~-~~~v~~Ll~~- 76 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAAL-TGELEVVQQAVKEMNDPSQPNEE--GITALHNAICGAN-YSIVDFLITA- 76 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHH-HTCHHHHHHHHHHSSCTTCCCTT--SCCHHHHHHHTTC-HHHHHHHHHT-
T ss_pred eehhccCCCCccccccccchhHHHHHHHH-cCCHHHHHHHHhcCCCCCCCCCC--CCCHHHHHHHcCC-HHHHHHHHHC-
Confidence 344455554443322 3344555555 55556666666666666655555 8999999999999 9999999998
Q ss_pred CCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCC-cCCCCccccc--ccCChHHHHHHHHHcCCCccccccCC
Q psy8109 745 NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILD-LKDTSPLLSS--CRQGLYEIVDTLLEYNADTNLRTIKH 821 (1011)
Q Consensus 745 g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d-~~g~t~L~~A--~~~g~~~iv~~Ll~~g~~~~~~~~~~ 821 (1011)
|++++..|..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+| +..|+.+++++|+++|++++. .+..
T Consensus 77 ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~-~~~~ 155 (229)
T 2vge_A 77 GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGL-MNSG 155 (229)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTT-SGGG
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccc-ccCC
Confidence 99999999999999999999999999999999999999987 6999999999 999999999999999999998 6788
Q ss_pred CChHHHHHHHcCCHHHHHHHHhccCC--cccccCCCCCHHHHHHHcCCHHHHHHH
Q psy8109 822 GSTALHTAAFHNQLDIIKLLLKYNAD--INAEDKYGKIAFHSACQAKNWDIVTFL 874 (1011)
Q Consensus 822 g~t~L~~Aa~~g~~~iv~~Ll~~ga~--in~~d~~g~taL~~A~~~g~~~iv~~L 874 (1011)
|.||++.++..+ .+++|++.|++ ++.+|..|+||||+|+..|+.++|+.+
T Consensus 156 ~~~~l~~~~~~~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 156 AVYALWDYSAEF---GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp EEEESSCBCCSS---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred chHHHHHHhhcc---ccccCccccccccccccCCCcccHHHHHHHcCCcceeehh
Confidence 899998765544 34688899998 778899999999999999999988753
No 75
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=1.1e-25 Score=219.45 Aligned_cols=152 Identities=26% Similarity=0.312 Sum_probs=99.0
Q ss_pred CcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCCh
Q psy8109 721 MTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGL 800 (1011)
Q Consensus 721 ~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~ 800 (1011)
.|||+.|+..|+ .+++++|++..+.+++..+..|.||||+ +..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 3 GDRLSGAAARGD-VQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHTC-HHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred chHHHHHHHhCC-HHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 456666666666 6666666665445666666666666666 66666666666666666666666666666666666666
Q ss_pred HHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHh
Q psy8109 801 YEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLD 876 (1011)
Q Consensus 801 ~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~ 876 (1011)
.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++ ++++.+|..|.|||++|+..|+.+++++|++
T Consensus 81 ~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNV-PDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 6666666666666665 555666666666666666666666666 6666666666666666666666666666665
No 76
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=1.5e-25 Score=223.85 Aligned_cols=164 Identities=26% Similarity=0.272 Sum_probs=143.4
Q ss_pred CCcchHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q psy8109 212 SQGYKALCWALQEKKTDIAKLLVDK-GVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKS 290 (1011)
Q Consensus 212 ~~g~t~L~~Aa~~G~~~iv~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~ 290 (1011)
+.+.++|+.||..|+.++|++|++. +.+++..+. .|.||||.|+..|+.++|++|++.|++++..+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 71 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDD-----------HGFSPLHWACREGRSAVVEMLIMRGARINVMNRG 71 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCC-----------CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC
Confidence 4567889999999999999999987 556666665 7889999999999999999999999998887766
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHc
Q psy8109 291 RNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQ 370 (1011)
Q Consensus 291 ~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~ 370 (1011)
|.||||+|+..|+.++|++|+++|+ +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..
T Consensus 72 -g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 148 (179)
T 3f6q_A 72 -DDTPLHLAASHGHRDIVQKLLQYKA--DINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAP 148 (179)
T ss_dssp -CCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHH
T ss_pred -CCCHHHHHHHcCCHHHHHHHHHcCC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHH
Confidence 8999999999999999999999988 7888899999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHhcCCCCCCC
Q psy8109 371 NCLEVFNYLVNHGCDLSVP 389 (1011)
Q Consensus 371 g~~~iv~~Ll~~g~~~~~~ 389 (1011)
++.+++++|+++|++++..
T Consensus 149 ~~~~~~~~L~~~g~~~~~~ 167 (179)
T 3f6q_A 149 LRELLRERAEKMGQNLNRI 167 (179)
T ss_dssp HHHHHHHHHHHTTCCCSCB
T ss_pred HHHHHHHHHHHhhcCcccC
Confidence 9999999999999988765
No 77
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=1.2e-25 Score=221.41 Aligned_cols=159 Identities=30% Similarity=0.370 Sum_probs=129.3
Q ss_pred CCCcchHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q psy8109 211 HSQGYKALCWALQEKKTDIAKLLVDK-GVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEK 289 (1011)
Q Consensus 211 ~~~g~t~L~~Aa~~G~~~iv~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~ 289 (1011)
++.|.|+|+.|+..|+.+++++|++. +.+++..+. .|.||||.|+..|+.++|++|+++|++++..+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 73 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEG-----------RQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDK 73 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTT-----------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCcccccc-----------CCCCHHHHHHHcChHHHHHHHHhcCCCCCccCC
Confidence 56778888888888888888888874 334443333 677888888888888888888888888877776
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHH
Q psy8109 290 SRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIA 369 (1011)
Q Consensus 290 ~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~ 369 (1011)
. |.||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+.
T Consensus 74 ~-g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 74 G-GLVPLHNACSYGHYEVAELLVKHGA--VVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp T-SCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT
T ss_pred C-CCCHHHHHHHcCcHHHHHHHHhCCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc
Confidence 5 8888888888888888888888888 678888888888888888888888888888888888888888888888766
Q ss_pred cCChhHHHHHHhcCC
Q psy8109 370 QNCLEVFNYLVNHGC 384 (1011)
Q Consensus 370 ~g~~~iv~~Ll~~g~ 384 (1011)
|+.+++++|+++|+
T Consensus 151 -~~~~i~~~L~~~gA 164 (165)
T 3twr_A 151 -GDTDIQDLLRGDAA 164 (165)
T ss_dssp -TCHHHHHHHHTC--
T ss_pred -CChHHHHHHhhccc
Confidence 88888888888775
No 78
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=8.8e-25 Score=212.91 Aligned_cols=153 Identities=24% Similarity=0.355 Sum_probs=114.8
Q ss_pred cchHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q psy8109 214 GYKALCWALQEKKTDIAKLLVDK-GVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRN 292 (1011)
Q Consensus 214 g~t~L~~Aa~~G~~~iv~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g 292 (1011)
|.|+|++|+..|+.+++++|++. +.+++..+. .|.||||. +..|+.++|++|+++|++++..+.. |
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-----------~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~-g 68 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNR-----------FGKTALQV-MMFGSTAIALELLKQGASPNVQDTS-G 68 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCT-----------TSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTT-S
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCC-----------CCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCC-C
Confidence 45777888888888888877776 335555554 67777777 7777777777777777777766655 7
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCC
Q psy8109 293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNC 372 (1011)
Q Consensus 293 ~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~ 372 (1011)
.||||+|+..|+.+++++|+++|+ +++.++..|.||||+|+..|+.+++++|+++ ++++..+..|.|||++|+..|+
T Consensus 69 ~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~ 145 (156)
T 1bd8_A 69 TSPVHDAARTGFLDTLKVLVEHGA--DVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGA 145 (156)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTC--CSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCC
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCC--CCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCc
Confidence 777777777777777777777777 6777777777777777777777777777777 7777777777777777777777
Q ss_pred hhHHHHHHhc
Q psy8109 373 LEVFNYLVNH 382 (1011)
Q Consensus 373 ~~iv~~Ll~~ 382 (1011)
.+++++|+++
T Consensus 146 ~~~v~~Ll~~ 155 (156)
T 1bd8_A 146 QDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 7777777764
No 79
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=4.7e-25 Score=209.10 Aligned_cols=134 Identities=24% Similarity=0.317 Sum_probs=129.9
Q ss_pred CCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCC-CC
Q psy8109 745 NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKH-GS 823 (1011)
Q Consensus 745 g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~-g~ 823 (1011)
+++++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+. |+.+++++|+++|++++. .+.. |.
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC-ADPATLT 79 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC-CBTTTTB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC-cCCCCCC
Confidence 57889999999999999999999999999999999999999999999999999 999999999999999998 6777 99
Q ss_pred hHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q psy8109 824 TALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN 880 (1011)
Q Consensus 824 t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~ 880 (1011)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999999999986
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=1.6e-26 Score=242.60 Aligned_cols=177 Identities=16% Similarity=0.129 Sum_probs=135.3
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHHhcCCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCC
Q psy8109 720 YMTPLHYASYRGDCNDIARFLVEECNADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQG 799 (1011)
Q Consensus 720 ~~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g 799 (1011)
|.||||.|+..++ .++++.|+++ |++++.. ..|.||||.|+..|+.++|++|++.|++++..|..|.||||+|+..|
T Consensus 5 g~t~L~~a~~~~~-~~~~~~ll~~-g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 5 GQVSLPPGKRTNL-RKTGSERIAH-GMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred ccccCchhhhhhh-HHHHHHHhcc-CCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 8999999999999 9999999998 9999864 67899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCC-CHHHHH--HHcCCHHHHHHHHh
Q psy8109 800 LYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGK-IAFHSA--CQAKNWDIVTFLLD 876 (1011)
Q Consensus 800 ~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~-taL~~A--~~~g~~~iv~~Ll~ 876 (1011)
+.++|++|+++|++++. .+..|+||||+|+..|+.++|++|+++|++++.++..|. ||||+| +..|+.+++++|++
T Consensus 82 ~~~~v~~Ll~~ga~~~~-~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~ 160 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNA-ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG 160 (239)
T ss_dssp CHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHH
Confidence 99999999999999998 788999999999999999999999999999999998877 999999 78899999999999
Q ss_pred cCCCcccc---------cccCCCHHhhHHhhCC
Q psy8109 877 AGSNIEKA---------TKYRMTFESSKVVEKH 900 (1011)
Q Consensus 877 ~ga~~~~~---------~~~g~t~l~~a~~~~~ 900 (1011)
+|++++.. +..+.++++++...|.
T Consensus 161 ~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 161 VQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred hhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 99998876 4557788888777765
No 81
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=8.5e-26 Score=237.08 Aligned_cols=178 Identities=19% Similarity=0.242 Sum_probs=128.3
Q ss_pred CCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Q psy8109 212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSR 291 (1011)
Q Consensus 212 ~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~ 291 (1011)
..|.|||+.|+..|+.++++.|+++|++++... .+.||||.|+..|+.++|++|++.|++++..+..
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~------------~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~- 69 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNP------------LPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDE- 69 (239)
T ss_dssp ----------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTT-
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccCc------------hhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-
Confidence 468899999999999999999999999987542 5789999999999999999999999998888766
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCC-cHHHHH--H
Q psy8109 292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGC-TPLFCA--I 368 (1011)
Q Consensus 292 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~-t~L~~A--~ 368 (1011)
|.||||+|+..|+.++|++|+++|+ +++.+|..|+||||+|+..|+.++|++|+++|++++..+..|. |||++| +
T Consensus 70 g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~ 147 (239)
T 1ycs_B 70 GITALHNAVCAGHTEIVKFLVQFGV--NVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEM 147 (239)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHh
Confidence 9999999999999999999999998 7899999999999999999999999999999999999988777 999999 7
Q ss_pred HcCChhHHHHHHhcCCCCCCC----------CCCCcHHHHHHhcCC
Q psy8109 369 AQNCLEVFNYLVNHGCDLSVP----------EGERTALHMASQFGN 404 (1011)
Q Consensus 369 ~~g~~~iv~~Ll~~g~~~~~~----------~~~~t~L~~Aa~~g~ 404 (1011)
..|+.+++++|+++|++++.. ..+.++++++...|.
T Consensus 148 ~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 148 EEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp STTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred hhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 889999999999999887753 234566777766665
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=5.6e-25 Score=214.09 Aligned_cols=145 Identities=21% Similarity=0.248 Sum_probs=120.9
Q ss_pred ccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCCh-HHH
Q psy8109 749 TLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGST-ALH 827 (1011)
Q Consensus 749 ~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t-~L~ 827 (1011)
+..+..|.||||.|+..|+.++|++|+++|++++..+..|.||||+|+ .|+.+++++|+++|++++. .+..|.| |||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~-~d~~g~ttpL~ 83 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC-ADPATLTRPVH 83 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC-CCTTTCCCHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC-cCCCCCcHHHH
Confidence 345678999999999999999999999999999999999999999986 9999999999999999998 7888998 999
Q ss_pred HHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhH
Q psy8109 828 TAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSK 895 (1011)
Q Consensus 828 ~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a 895 (1011)
+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||.+.+
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999987643
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=1.6e-24 Score=216.46 Aligned_cols=153 Identities=18% Similarity=0.126 Sum_probs=88.2
Q ss_pred CcHHHHHHHCCCHHHHHHHHHHhcCCCccccc-CCCccHHHHHHhCCCH----HHHHHHHHCCCCCCCCCcCCCCccccc
Q psy8109 721 MTPLHYASYRGDCNDIARFLVEECNADITLRN-FNNRTALNFAAFGNNL----DLLKFLLKAGADPDILDLKDTSPLLSS 795 (1011)
Q Consensus 721 ~t~l~~A~~~g~~~~iv~~Ll~~~g~~~~~~~-~~g~t~L~~Aa~~g~~----~iv~~Ll~~gad~~~~d~~g~t~L~~A 795 (1011)
.++++.|+..|+ .+.++.++.. + ++..+ ..|+||||+|+..|+. +++++|+++|+++|.++..|+||||+|
T Consensus 7 ~~~l~~Aa~~g~-~~~~~~l~~~-~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 7 YRTVSAAAMLGT-YEDFLELFEK-G--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp CSSHHHHHHHSC-HHHHHHHHHH-S--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHH
T ss_pred ccHHHHHHHcCC-HHHHHHHHhc-C--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 355666666666 4455555444 2 22333 4466666666666653 356666666666666666666666666
Q ss_pred ccCCh------HHHHHHHHHcCCCccccccCCCC-hHHHHHHHcC-----CHHHHHHHHh-ccCCcccccCCCCCHHHHH
Q psy8109 796 CRQGL------YEIVDTLLEYNADTNLRTIKHGS-TALHTAAFHN-----QLDIIKLLLK-YNADINAEDKYGKIAFHSA 862 (1011)
Q Consensus 796 ~~~g~------~~iv~~Ll~~g~~~~~~~~~~g~-t~L~~Aa~~g-----~~~iv~~Ll~-~ga~in~~d~~g~taL~~A 862 (1011)
+..|+ .++|++|+++|+++|. .+..|. ||||+|+..+ +.+++++|++ +|++++.+|..|+||||+|
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~-~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A 161 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGADITA-LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFV 161 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCSSS-CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred HHcCCcchhhHHHHHHHHHHCCCCCCc-cCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHH
Confidence 65553 4556666666666665 455555 6666665532 2345666665 5666666666666666666
Q ss_pred HHcCCHHHHHHHHhcC
Q psy8109 863 CQAKNWDIVTFLLDAG 878 (1011)
Q Consensus 863 ~~~g~~~iv~~Ll~~g 878 (1011)
++.|+.++|++|++..
T Consensus 162 ~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 162 KRCQKPIALKMMEDYI 177 (186)
T ss_dssp HTTTCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHH
Confidence 6666666666666543
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=1.8e-23 Score=198.06 Aligned_cols=125 Identities=29% Similarity=0.382 Sum_probs=117.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCC-CCCHHHHHH
Q psy8109 257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVA-GLTPLHIAC 335 (1011)
Q Consensus 257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~-g~t~L~~Aa 335 (1011)
.|.||||.|+..|+.++|++|+++|++++..+.. |.||||+|+. |+.+++++|+++|+ +++.++.. |.||||+|+
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~-~~~~~v~~Ll~~g~--~~~~~~~~~g~t~L~~A~ 86 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLEAGADPNALNRF-GRRPIQVMMM-GSAQVAELLLLHGA--EPNCADPATLTRPVHDAA 86 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCTTTTTSTT-SCHHHHHHHHHHTC--CSSCCBTTTTBCHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCC-CCCHHHHHHc-CCHHHHHHHHHCCC--CCCCcCCCCCCCHHHHHH
Confidence 8899999999999999999999999999887766 9999999999 99999999999998 78889999 999999999
Q ss_pred hcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCC
Q psy8109 336 RRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD 385 (1011)
Q Consensus 336 ~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~ 385 (1011)
..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++
T Consensus 87 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 87 REGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999875
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=2.9e-24 Score=214.48 Aligned_cols=153 Identities=18% Similarity=0.148 Sum_probs=139.0
Q ss_pred CccHHHHHHhCCCHHHHHHHHHCCCCCCCCC-cCCCCcccccccCChH----HHHHHHHHcCCCccccccCCCChHHHHH
Q psy8109 755 NRTALNFAAFGNNLDLLKFLLKAGADPDILD-LKDTSPLLSSCRQGLY----EIVDTLLEYNADTNLRTIKHGSTALHTA 829 (1011)
Q Consensus 755 g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d-~~g~t~L~~A~~~g~~----~iv~~Ll~~g~~~~~~~~~~g~t~L~~A 829 (1011)
+.++|+.|+..|+.+.++.++..+. +..+ ..|+||||+|+..|+. +++++|+++|+++|. .+..|+||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~-~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKS-RTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC-CCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC-CCCCCCcHHHHH
Confidence 4678999999999999999998774 4455 7799999999999964 599999999999998 779999999999
Q ss_pred HHcCC------HHHHHHHHhccCCcccccCCCC-CHHHHHHHcC-----CHHHHHHHHh-cCCCcccccccCCCHHhhHH
Q psy8109 830 AFHNQ------LDIIKLLLKYNADINAEDKYGK-IAFHSACQAK-----NWDIVTFLLD-AGSNIEKATKYRMTFESSKV 896 (1011)
Q Consensus 830 a~~g~------~~iv~~Ll~~ga~in~~d~~g~-taL~~A~~~g-----~~~iv~~Ll~-~ga~~~~~~~~g~t~l~~a~ 896 (1011)
+..|+ .++|++|+++|+++|.+|..|+ ||||+|+..+ +.+++++|++ +|++++.+|..|.||||+|+
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~ 162 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVK 162 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHH
T ss_pred HHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHH
Confidence 99987 6889999999999999999999 9999999954 4679999999 99999999999999999999
Q ss_pred hhCCHHHHHHhhhc
Q psy8109 897 VEKHVAKLRAANIY 910 (1011)
Q Consensus 897 ~~~~~~~~~~~~~~ 910 (1011)
..|+.++++.+.-|
T Consensus 163 ~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 163 RCQKPIALKMMEDY 176 (186)
T ss_dssp TTTCHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHH
Confidence 99999999887544
No 86
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=3.3e-23 Score=201.55 Aligned_cols=140 Identities=19% Similarity=0.229 Sum_probs=82.4
Q ss_pred CCCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q psy8109 211 HSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKS 290 (1011)
Q Consensus 211 ~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~ 290 (1011)
+..|.|+||+|+..|+.++|++|++.|++++..+. .|.||||+|+ .|+.++|++|+++|++++..+..
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----------~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~ 76 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNS-----------YGRRPIQVMM-MGSARVAELLLLHGAEPNCADPA 76 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCS-----------SSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTT
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-----------CCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCC
Confidence 45566677777777777777777766666665554 5666666664 66666666666666666655554
Q ss_pred CCCc-HHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHH
Q psy8109 291 RNRT-ALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLF 365 (1011)
Q Consensus 291 ~g~t-~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~ 365 (1011)
|.| |||+|+..|+.++|++|+++|+ +++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||.+
T Consensus 77 -g~ttpL~~A~~~~~~~~v~~Ll~~ga--~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 77 -TLTRPVHDAAREGFLDTLVVLHRAGA--RLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp -TCCCHHHHHHHHTCHHHHHHHHHHTC--CSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred -CCcHHHHHHHHCCCHHHHHHHHHcCC--CCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 665 6666666666666666666666 56666666666666666666666666666666666666666666554
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=8.8e-23 Score=190.57 Aligned_cols=126 Identities=42% Similarity=0.628 Sum_probs=118.2
Q ss_pred CCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcC
Q psy8109 754 NNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHN 833 (1011)
Q Consensus 754 ~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g 833 (1011)
+|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCcHHHHHHHcC
Confidence 478999999999999999999999999999999999999999999999999999999999987 7788999999999999
Q ss_pred CHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q psy8109 834 QLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN 880 (1011)
Q Consensus 834 ~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~ 880 (1011)
+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|+++|||
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999986
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=8.1e-23 Score=193.63 Aligned_cols=126 Identities=36% Similarity=0.430 Sum_probs=116.9
Q ss_pred cCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHH
Q psy8109 752 NFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAF 831 (1011)
Q Consensus 752 ~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~ 831 (1011)
...+.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+.
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA-VDAIGFTPLHLAAF 89 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHH
Confidence 34578999999999999999999999999999999999999999999999999999999999987 77899999999999
Q ss_pred cCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy8109 832 HNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAG 878 (1011)
Q Consensus 832 ~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~g 878 (1011)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999886
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=1.2e-21 Score=182.82 Aligned_cols=126 Identities=46% Similarity=0.676 Sum_probs=115.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q psy8109 257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR 336 (1011)
Q Consensus 257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~ 336 (1011)
.|.||||.|+..|+.++|++|+++|++++..+.. |.||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~--~~~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGA--DVNAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC-CCcHHHHHHHcCcHHHHHHHHHcCC--CCcccCCCCCcHHHHHHH
Confidence 3779999999999999999999999998877666 9999999999999999999999998 788889999999999999
Q ss_pred cCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCC
Q psy8109 337 RKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD 385 (1011)
Q Consensus 337 ~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~ 385 (1011)
.|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++
T Consensus 78 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred cChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999875
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=7.4e-22 Score=186.97 Aligned_cols=124 Identities=29% Similarity=0.392 Sum_probs=111.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q psy8109 257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR 336 (1011)
Q Consensus 257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~ 336 (1011)
.+.||||.|+..|+.++|++|+++|++++..+.. |.||||+|+..|+.+++++|+++|+ +++..|..|.||||+|+.
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADVNAKDEY-GLTPLYLATAHGHLEIVEVLLKNGA--DVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHH
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHcCC--CCCcCCCCCCCHHHHHHH
Confidence 5678999999999999999999999998877665 8999999999999999999999988 788889999999999999
Q ss_pred cCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcC
Q psy8109 337 RKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHG 383 (1011)
Q Consensus 337 ~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g 383 (1011)
.|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999998876
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=8.1e-23 Score=193.96 Aligned_cols=121 Identities=24% Similarity=0.282 Sum_probs=63.3
Q ss_pred CCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHH
Q psy8109 784 LDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSAC 863 (1011)
Q Consensus 784 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~ 863 (1011)
++..|.||||+|+..|+.+++++|+++|++++. .+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNV-KDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 344444444444444444444444444444443 3444555555555555555555555555555555555555555555
Q ss_pred HcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCHHHHH
Q psy8109 864 QAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHVAKLR 905 (1011)
Q Consensus 864 ~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~ 905 (1011)
..|+.+++++|+++|++++..|..|.||+++|+..+..++++
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~ 126 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLL 126 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHS
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHh
Confidence 555555555555555555555555555555555555544443
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=2.9e-22 Score=190.17 Aligned_cols=134 Identities=28% Similarity=0.419 Sum_probs=121.6
Q ss_pred CCCcccccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCCh
Q psy8109 745 NADITLRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGST 824 (1011)
Q Consensus 745 g~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t 824 (1011)
|+|+ .++..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++. .+..|.|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t 78 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT-TGYQNDS 78 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCGGGCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC-cCCCCCC
Confidence 5666 6889999999999999999999999999999999999999999999999999999999999999997 7889999
Q ss_pred HHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q psy8109 825 ALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN 880 (1011)
Q Consensus 825 ~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~ 880 (1011)
|||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|.+++..
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 99999999999999999999999999999999999999999999999998877654
No 93
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=2.5e-21 Score=209.43 Aligned_cols=140 Identities=21% Similarity=0.131 Sum_probs=118.7
Q ss_pred CccHHHHHHhCCCHHHHHHHHHCCCCCCC------CCcCCCCcccccccC---ChHHHHHHHHHcCCCccccccCCCChH
Q psy8109 755 NRTALNFAAFGNNLDLLKFLLKAGADPDI------LDLKDTSPLLSSCRQ---GLYEIVDTLLEYNADTNLRTIKHGSTA 825 (1011)
Q Consensus 755 g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~------~d~~g~t~L~~A~~~---g~~~iv~~Ll~~g~~~~~~~~~~g~t~ 825 (1011)
..++|+.|+..|+.+.++.|++.|++++. .+..|.||||+|+.. |+.++|++|+++|++++. .+..|.||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~-~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA-KAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC-CCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC-CCCCCCCH
Confidence 45678899999999999999999988887 578889999999886 889999999999999987 77889999
Q ss_pred HHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHhhCCH
Q psy8109 826 LHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVVEKHV 901 (1011)
Q Consensus 826 L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~ 901 (1011)
||+|+..|+.++|++|+++|++++.+|..|.|||++|+..|+.+++++|+++|++ .|.||||+|+..|+.
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 9999999999999999999999999999999999999999999999999998876 578999999988864
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.83 E-value=2.7e-21 Score=179.50 Aligned_cols=111 Identities=26% Similarity=0.259 Sum_probs=65.6
Q ss_pred CCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCC
Q psy8109 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKN 867 (1011)
Q Consensus 788 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~ 867 (1011)
|.||||+|+..|+.+++++|++.|++++. .+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~ 85 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGEDVNR-TLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGH 85 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTS-CCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcCc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 34444444444444444444444444443 44456666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHHhcCCCcccccccCCCHHhhHHhhC
Q psy8109 868 WDIVTFLLDAGSNIEKATKYRMTFESSKVVEK 899 (1011)
Q Consensus 868 ~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~ 899 (1011)
.+++++|+++|++++..|..|.||+++|...+
T Consensus 86 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 86 VSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHH
Confidence 66666666666666666666666666664433
No 95
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.83 E-value=1.1e-21 Score=203.44 Aligned_cols=137 Identities=26% Similarity=0.268 Sum_probs=115.2
Q ss_pred ccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHc-CCCccccccCCCChHHHHH
Q psy8109 751 RNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEY-NADTNLRTIKHGSTALHTA 829 (1011)
Q Consensus 751 ~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~g~t~L~~A 829 (1011)
.+..|.||||.|+..|+.++|++|++.|++++..+..|.||||+|+..|+.++|++|+++ |++++. .+..|+||||+|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~-~d~~g~tpL~~A 147 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ-QNKLGDTALHAA 147 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC-CCTTSCCHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc-cCCCCCCHHHHH
Confidence 356789999999999999999999999999999999999999999999999999999998 999997 788999999999
Q ss_pred HHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccC
Q psy8109 830 AFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYR 888 (1011)
Q Consensus 830 a~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g 888 (1011)
+..|+.++|++|+++|++++.+|..|+|||++|+..|+.++++.|++.|+.....+..+
T Consensus 148 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 148 AWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp HHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred HHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence 99999999999999999999999999999999999999999999999999887766544
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.83 E-value=1e-20 Score=189.31 Aligned_cols=140 Identities=24% Similarity=0.202 Sum_probs=98.6
Q ss_pred CCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Q psy8109 212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSR 291 (1011)
Q Consensus 212 ~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~ 291 (1011)
..|.||||+|+..|+.+++++|++ |++++..+. .|.||||+|+..|+.++|++|+++|++++..++..
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~-----------~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~ 109 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDE-----------NGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG 109 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCT-----------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSS
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCC-----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCC
Confidence 356678888888888888888877 777776665 67777777777777777777777777776666444
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy8109 292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN 371 (1011)
Q Consensus 292 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g 371 (1011)
|+||||+|+..|+.+++++|+++|+ +++.+|..|.||||+|+..++. ..+.++|++|+..|
T Consensus 110 g~tpL~~A~~~~~~~~v~~Ll~~ga--~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~ 170 (183)
T 3deo_A 110 GLTALHMAAGYVRPEVVEALVELGA--DIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIG 170 (183)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTC--CTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHH
T ss_pred CCCHHHHHHhcCcHHHHHHHHHcCC--CCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcC
Confidence 7777777777777777777777776 5666777777777777664322 23456677777777
Q ss_pred ChhHHHHHHhc
Q psy8109 372 CLEVFNYLVNH 382 (1011)
Q Consensus 372 ~~~iv~~Ll~~ 382 (1011)
+.+++++|.++
T Consensus 171 ~~~i~~~L~~~ 181 (183)
T 3deo_A 171 LEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 77776666554
No 97
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.83 E-value=1.2e-20 Score=188.68 Aligned_cols=138 Identities=29% Similarity=0.355 Sum_probs=127.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccC-CCCCCHHHHHH
Q psy8109 257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQN-VAGLTPLHIAC 335 (1011)
Q Consensus 257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~-~~g~t~L~~Aa 335 (1011)
.|.||||.|+..|+.++|++|++ |++++..+.. |+||||+|+..|+.++|++|+++|+ +++..+ ..|+||||+|+
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~-g~t~L~~A~~~~~~~~v~~Ll~~ga--~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRDVDAVDEN-GRTALLFVAGLGSDKCVRLLAEAGA--DLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCSSSSCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHcCC--CCCcCCCCCCCCHHHHHH
Confidence 67899999999999999999999 9999887776 9999999999999999999999999 788888 88999999999
Q ss_pred hcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy8109 336 RRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKH 414 (1011)
Q Consensus 336 ~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ 414 (1011)
..|+.+++++|+++|++++..+..|.|||++|+..++. ....++|++|+..|+.+++++|.++
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~----------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKT----------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 99999999999999999999999999999999986544 2236899999999999999999765
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=3.9e-20 Score=200.04 Aligned_cols=141 Identities=23% Similarity=0.221 Sum_probs=120.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCccc-----ccCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCCCcccCCCCCC
Q psy8109 258 TDTPLHSAILNSDIELVKLLLEKGANPLAI-----EKSRNRTALHVAAIV---ESVDIVKLLFDYGAEKSVNVQNVAGLT 329 (1011)
Q Consensus 258 ~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-----~~~~g~t~L~~Aa~~---g~~~iv~~Ll~~~~~~~~~~~~~~g~t 329 (1011)
..++|+.|+..|+++.|+.|++.|++++.. .+..|.||||+|+.. |+.++|++|+++|+ +++.+|..|.|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga--dvn~~d~~G~T 228 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG--HLDAKAADGNT 228 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSS--CTTCCCTTCCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCC--CCCCCCCCCCC
Confidence 457799999999999999999999998763 344489999999997 89999999999998 78999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCH
Q psy8109 330 PLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNL 405 (1011)
Q Consensus 330 ~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~ 405 (1011)
|||+|+..|+.++|++|+++|++++..|..|.|||++|+..|+.+++++|+++|++ .+.||||+|+..|+.
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-----~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-----TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-----TTSSCCC--------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-----CCCChhHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999999886 357999999988864
No 99
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=1.7e-20 Score=197.04 Aligned_cols=138 Identities=29% Similarity=0.355 Sum_probs=127.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccC-CCCCCHHHHHH
Q psy8109 257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQN-VAGLTPLHIAC 335 (1011)
Q Consensus 257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~-~~g~t~L~~Aa 335 (1011)
.|.||||.|+..|+.++|++|++ |++++..+.. |.||||+|+..|+.++|++|+++|+ +++..+ ..|.||||+|+
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~-g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDEN-GRTALLFVAGLGSDKCVRLLAEAGA--DLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTT-SCBHHHHHHHHTCHHHHHHHHHTTC--CTTCCCSSSCCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCC-CCCHHHHHHHCCCHHHHHHHHHcCC--CCCcCCCCCCCCHHHHHH
Confidence 57899999999999999999999 9999888776 9999999999999999999999999 788888 88999999999
Q ss_pred hcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhc
Q psy8109 336 RRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKH 414 (1011)
Q Consensus 336 ~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ 414 (1011)
..|+.++|++|+++|++++..+..|.||||+|+..++. ..+.+||++|+..|+.+++++|+++
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~----------------~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKT----------------TPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTT----------------CCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhc----------------cCCCCHHHHHHHcChHHHHHHHHHh
Confidence 99999999999999999999999999999999874332 2347999999999999999999986
No 100
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=1.1e-20 Score=198.39 Aligned_cols=143 Identities=23% Similarity=0.203 Sum_probs=130.9
Q ss_pred CCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Q psy8109 212 SQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSR 291 (1011)
Q Consensus 212 ~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~ 291 (1011)
..|.||||+||..|+.++|++|++ |++++..+. .|.||||.|+..|+.++|++|+++|++++..++..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~-----------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~ 110 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDE-----------NGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG 110 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCT-----------TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSS
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCC-----------CCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCC
Confidence 467899999999999999999999 999988877 89999999999999999999999999999888566
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy8109 292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN 371 (1011)
Q Consensus 292 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g 371 (1011)
|.||||+|+..|+.++|++|+++|+ +++.+|..|.||||+|+..+ ....+.+||++|+..|
T Consensus 111 g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~d~~g~t~l~~A~~~~-----------------~~~~~~~~l~~a~~~g 171 (244)
T 3ui2_A 111 GLTALHMAAGYVRPEVVEALVELGA--DIEVEDERGLTALELAREIL-----------------KTTPKGNPMQFGRRIG 171 (244)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHHH-----------------TTCCCSSHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCC--CCCCCCCCCCcHHHHHHHHH-----------------hccCCCCHHHHHHHcC
Confidence 9999999999999999999999999 78999999999999998632 2246789999999999
Q ss_pred ChhHHHHHHhcCCC
Q psy8109 372 CLEVFNYLVNHGCD 385 (1011)
Q Consensus 372 ~~~iv~~Ll~~g~~ 385 (1011)
+.+++++|++++.+
T Consensus 172 ~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 172 LEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHHHHEE
T ss_pred hHHHHHHHHHhccc
Confidence 99999999997554
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.83 E-value=5.3e-21 Score=177.51 Aligned_cols=117 Identities=26% Similarity=0.243 Sum_probs=106.4
Q ss_pred cCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHH
Q psy8109 752 NFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAF 831 (1011)
Q Consensus 752 ~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~ 831 (1011)
+..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++. .+..|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA-PDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999999999999997 78899999999999
Q ss_pred cCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHH
Q psy8109 832 HNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWD 869 (1011)
Q Consensus 832 ~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~ 869 (1011)
.|+.+++++|+++|++++.+|..|+|||++|+..+..+
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHH
Confidence 99999999999999999999999999999995444333
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.80 E-value=2.3e-19 Score=191.73 Aligned_cols=126 Identities=24% Similarity=0.209 Sum_probs=113.9
Q ss_pred CccHHHHHHhCCCHHHHHHHHHCCCCCC------CCCcCCCCcccccccC---ChHHHHHHHHHcCCCccccccCCCChH
Q psy8109 755 NRTALNFAAFGNNLDLLKFLLKAGADPD------ILDLKDTSPLLSSCRQ---GLYEIVDTLLEYNADTNLRTIKHGSTA 825 (1011)
Q Consensus 755 g~t~L~~Aa~~g~~~iv~~Ll~~gad~~------~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~g~~~~~~~~~~g~t~ 825 (1011)
..++|+.|+..|+.+.+..++..|++++ ..+..|.||||+|+.. |+.++|++|+++|++++. .+..|+||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~-~d~~g~Tp 208 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK-QTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC-CCTTCCCH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccc-cCCCCCCH
Confidence 3468889999999999999999998844 4478899999999998 899999999999999997 78899999
Q ss_pred HHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCc
Q psy8109 826 LHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNI 881 (1011)
Q Consensus 826 L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~ 881 (1011)
||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++.
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999999999999998853
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.80 E-value=7.5e-20 Score=189.49 Aligned_cols=134 Identities=24% Similarity=0.233 Sum_probs=91.0
Q ss_pred CCCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCccccc
Q psy8109 211 HSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEK-GANPLAIEK 289 (1011)
Q Consensus 211 ~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~ 289 (1011)
+..|.|+||+||..|+.++|++|++.|++++..+. .|.||||+||..|+.++|++|++. |++++..+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~ 138 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDK-----------AGSTALYWACHGGHKDIVEMLFTQPNIELNQQNK 138 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-----------TSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCT
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCC-----------CCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCC
Confidence 34577888888888888888888888877776665 677777777777777777777777 777766665
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCC
Q psy8109 290 SRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGND 358 (1011)
Q Consensus 290 ~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~ 358 (1011)
. |.||||+|+..|+.++|++|+++|+ +++..+..|.|||++|+..|+.++++.|++.|+..+..+.
T Consensus 139 ~-g~tpL~~A~~~~~~~~v~~Ll~~ga--~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~ 204 (222)
T 3ehr_A 139 L-GDTALHAAAWKGYADIVQLLLAKGA--RTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNA 204 (222)
T ss_dssp T-SCCHHHHHHHHTCHHHHHHHHHHTC--CSCCCCTTSCCHHHHCCSHHHHHHHC--------------
T ss_pred C-CCCHHHHHHHcCCHHHHHHHHHcCC--CCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccch
Confidence 5 7777777777777777777777777 6677777777777777777777777777777776654443
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.80 E-value=2.5e-19 Score=191.44 Aligned_cols=174 Identities=22% Similarity=0.196 Sum_probs=112.5
Q ss_pred CCCCcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCC----------------CccccCC----CCCChHHHHHHHcC
Q psy8109 210 SHSQGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVP----------------LNYSRRI----IETDTPLHSAILNS 269 (1011)
Q Consensus 210 ~~~~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~----------------~~~~~~~----~~~~t~L~~A~~~g 269 (1011)
.+.++.+.|+.+...|+..+.+++...-........... ..+.... ....++|+.|+..|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~ 141 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR 141 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence 456777888888888887776665432111110000000 0000000 01124677777777
Q ss_pred CHHHHHHHHHcCCCCcccc-----cCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHH
Q psy8109 270 DIELVKLLLEKGANPLAIE-----KSRNRTALHVAAIV---ESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLE 341 (1011)
Q Consensus 270 ~~~iv~~Ll~~g~~~~~~~-----~~~g~t~L~~Aa~~---g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~ 341 (1011)
+++.++.+++.|++++... +..|.||||+|+.. |+.++|++|+++|+ ++|.+|..|.||||+|+..|+.+
T Consensus 142 d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga--~in~~d~~g~TpLh~A~~~g~~~ 219 (278)
T 1dcq_A 142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG--NLDKQTGKGSTALHYCCLTDNAE 219 (278)
T ss_dssp CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCS--CTTCCCTTCCCHHHHHHHTTCHH
T ss_pred ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCC--CccccCCCCCCHHHHHHHcCCHH
Confidence 7777777777777654321 23377777777777 77777777777777 67777777777777777777777
Q ss_pred HHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCC
Q psy8109 342 IVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCD 385 (1011)
Q Consensus 342 iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~ 385 (1011)
+|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++
T Consensus 220 ~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 220 CLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 77777777777777777777777777777777777777777764
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.79 E-value=1.5e-19 Score=210.68 Aligned_cols=128 Identities=23% Similarity=0.195 Sum_probs=97.3
Q ss_pred ccHHHHHHhCCCHHHHHHHHHCCCCCCCC------CcCCCCccccc---ccCChHHHHHHHHHcCCCccccccCCCChHH
Q psy8109 756 RTALNFAAFGNNLDLLKFLLKAGADPDIL------DLKDTSPLLSS---CRQGLYEIVDTLLEYNADTNLRTIKHGSTAL 826 (1011)
Q Consensus 756 ~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~------d~~g~t~L~~A---~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L 826 (1011)
.+.||.|+..|+.++|+.|++.|++++.. +..|.||||+| +..|+.++|++|+++|+++|. .+..|+|||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~-~d~~g~TpL 211 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA-KAADGNTAL 211 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTC-CCSSSCCHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCc-cCCCCCcHH
Confidence 35678888888888888888888877766 67778888888 447788888888888888876 667788888
Q ss_pred HHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccc
Q psy8109 827 HTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKA 884 (1011)
Q Consensus 827 ~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~ 884 (1011)
|+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 8888888888888888888888888888888888888888888888888888877764
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.79 E-value=1.5e-19 Score=199.50 Aligned_cols=146 Identities=23% Similarity=0.219 Sum_probs=119.7
Q ss_pred ccCCCccHHHHHHhC-CCHHHHHHHHHCCCCCCCCC--cCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHH
Q psy8109 751 RNFNNRTALNFAAFG-NNLDLLKFLLKAGADPDILD--LKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALH 827 (1011)
Q Consensus 751 ~~~~g~t~L~~Aa~~-g~~~iv~~Ll~~gad~~~~d--~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~ 827 (1011)
....+.|+||.|+.. |+.+++++|+++|++++..+ ..|.||||+|+..|+.++|++|+++|++++. .+..|+||||
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~-~d~~G~TpLh 273 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ-ADSAGRGPLH 273 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-CCCCCCCHHH
Confidence 344577899999999 99999999999999999988 8899999999999999999999999999997 8889999999
Q ss_pred HHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCC---cccccccCCCHHhhHHh
Q psy8109 828 TAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSN---IEKATKYRMTFESSKVV 897 (1011)
Q Consensus 828 ~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~---~~~~~~~g~t~l~~a~~ 897 (1011)
+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+..|.. ....+..+.|++++...
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred HHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987643 33445566677665543
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.78 E-value=3.4e-19 Score=155.90 Aligned_cols=92 Identities=41% Similarity=0.628 Sum_probs=72.0
Q ss_pred CCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCC
Q psy8109 788 DTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKN 867 (1011)
Q Consensus 788 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~ 867 (1011)
|+||||+|+..|+.+++++|+++|++++. .+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 56666666666667777777777777665 56678888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHhcCCC
Q psy8109 868 WDIVTFLLDAGSN 880 (1011)
Q Consensus 868 ~~iv~~Ll~~ga~ 880 (1011)
.+++++|+++||+
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 8888888888875
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.78 E-value=9.9e-19 Score=203.74 Aligned_cols=137 Identities=23% Similarity=0.230 Sum_probs=117.6
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCccc-----ccCCCCcHHHHHHH---hCCHHHHHHHHHcCCCCCCcccCCCCCC
Q psy8109 258 TDTPLHSAILNSDIELVKLLLEKGANPLAI-----EKSRNRTALHVAAI---VESVDIVKLLFDYGAEKSVNVQNVAGLT 329 (1011)
Q Consensus 258 ~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-----~~~~g~t~L~~Aa~---~g~~~iv~~Ll~~~~~~~~~~~~~~g~t 329 (1011)
..+.|+.|+..|++++|+.|++.|++++.. .+..|.||||+|+. .|+.++|++|+++|+ ++|.+|..|+|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga--~vn~~d~~g~T 209 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG--HLDAKAADGNT 209 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSC--CTTCCCSSSCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCC--CCCccCCCCCc
Confidence 347899999999999999999999998866 13349999999976 899999999999999 89999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCCCCCCCCcHHHHHHh
Q psy8109 330 PLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCLEVFNYLVNHGCDLSVPEGERTALHMASQ 401 (1011)
Q Consensus 330 ~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~ 401 (1011)
|||+||..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++. +|+|.+..
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~-----~~~h~~~~ 276 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA-----FPLHVDYS 276 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC-----Ccceeecc
Confidence 99999999999999999999999999999999999999999999999999999999874 67776653
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.76 E-value=2.5e-18 Score=150.38 Aligned_cols=92 Identities=45% Similarity=0.691 Sum_probs=73.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy8109 292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN 371 (1011)
Q Consensus 292 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g 371 (1011)
|+||||+|+..|+.+++++|+++|+ +++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~--~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGA--DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCC--CCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 6778888888888888888888777 67777788888888888888888888888888888888888888888888888
Q ss_pred ChhHHHHHHhcCCC
Q psy8109 372 CLEVFNYLVNHGCD 385 (1011)
Q Consensus 372 ~~~iv~~Ll~~g~~ 385 (1011)
+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 88888888887764
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.76 E-value=2.1e-18 Score=190.46 Aligned_cols=144 Identities=23% Similarity=0.236 Sum_probs=87.0
Q ss_pred CcchHHHHHHHc-CCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Q psy8109 213 QGYKALCWALQE-KKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSR 291 (1011)
Q Consensus 213 ~g~t~L~~Aa~~-G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~ 291 (1011)
.+.|+||+|+.. |+++++++|++.|++++..+. ...|.||||+|+..|+.++|++|+++|++++..+..
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~---------~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~- 267 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNG---------GQDNATPLIQATAANSLLACEFLLQNGANVNQADSA- 267 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCT---------TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCcccc---------ccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCC-
Confidence 455677777777 777777777777777765541 015667777777777777777777777777665554
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCC---CccCCCCCCcHHHHHH
Q psy8109 292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGAD---INSGNDDGCTPLFCAI 368 (1011)
Q Consensus 292 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~---~n~~~~~g~t~L~~A~ 368 (1011)
|.||||+|+..|+.++|++|+++|+ +++..|..|.||||+|+..|+.+++++|+..+.. ....+..+.|+++.+.
T Consensus 268 G~TpLh~A~~~g~~~~v~~LL~~Ga--d~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~ 345 (368)
T 3jue_A 268 GRGPLHHATILGHTGLACLFLKRGA--DLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFR 345 (368)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------
T ss_pred CCCHHHHHHHcCcHHHHHHHHHCcC--CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHH
Confidence 6777777777777777777777776 5666777777777777777777777777665422 2223334455555444
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.75 E-value=5.9e-19 Score=161.47 Aligned_cols=106 Identities=32% Similarity=0.404 Sum_probs=59.1
Q ss_pred CcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHH
Q psy8109 785 DLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQ 864 (1011)
Q Consensus 785 d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~ 864 (1011)
|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNA-RSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSC-CCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 33444444444444444444444444444443 44455556666666666666666666666666666666666666666
Q ss_pred cCCHHHHHHHHhcCCCcccccccCCCH
Q psy8109 865 AKNWDIVTFLLDAGSNIEKATKYRMTF 891 (1011)
Q Consensus 865 ~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 891 (1011)
.|+.+++++|+++|++++..+..|.+|
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred CCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 666666666666666666666655554
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.74 E-value=1.8e-18 Score=158.22 Aligned_cols=109 Identities=31% Similarity=0.320 Sum_probs=101.4
Q ss_pred cccCCCccHHHHHHhCCCHHHHHHHHHCCCCCCCCCcCCCCcccccccCChHHHHHHHHHcCCCccccccCCCChHHHHH
Q psy8109 750 LRNFNNRTALNFAAFGNNLDLLKFLLKAGADPDILDLKDTSPLLSSCRQGLYEIVDTLLEYNADTNLRTIKHGSTALHTA 829 (1011)
Q Consensus 750 ~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~A 829 (1011)
.+|..|.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA-RSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC-CCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCCHHHHH
Confidence 4678899999999999999999999999999999999999999999999999999999999999997 778999999999
Q ss_pred HHcCCHHHHHHHHhccCCcccccCCCCCHH
Q psy8109 830 AFHNQLDIIKLLLKYNADINAEDKYGKIAF 859 (1011)
Q Consensus 830 a~~g~~~iv~~Ll~~ga~in~~d~~g~taL 859 (1011)
+..|+.+++++|+++|+++|.++..|.||-
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 999999999999999999999999998873
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.62 E-value=1.1e-15 Score=138.15 Aligned_cols=90 Identities=23% Similarity=0.288 Sum_probs=81.3
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhccCCcccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCHHhhHHh
Q psy8109 818 TIKHGSTALHTAAFHNQLDIIKLLLKYNADINAEDKYGKIAFHSACQAKNWDIVTFLLDAGSNIEKATKYRMTFESSKVV 897 (1011)
Q Consensus 818 ~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~in~~d~~g~taL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~ 897 (1011)
.+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|+|||++|+.
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 99 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHh
Q psy8109 898 EKHVAKLRAA 907 (1011)
Q Consensus 898 ~~~~~~~~~~ 907 (1011)
.|+.++++.+
T Consensus 100 ~~~~~~~~~L 109 (110)
T 2zgd_A 100 NGNEDLAEIL 109 (110)
T ss_dssp HTCHHHHHHH
T ss_pred cCCHHHHHHh
Confidence 9999988765
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.59 E-value=4.2e-15 Score=134.23 Aligned_cols=86 Identities=34% Similarity=0.439 Sum_probs=60.0
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy8109 292 NRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQN 371 (1011)
Q Consensus 292 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g 371 (1011)
|.|+||+|+..|+.+++++|+++|+ +++..|..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~g~--~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 101 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMANGA--DVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNG 101 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcC
Confidence 5666777777777777777776666 56666666777777777777777777777777777766767777777777777
Q ss_pred ChhHHHHH
Q psy8109 372 CLEVFNYL 379 (1011)
Q Consensus 372 ~~~iv~~L 379 (1011)
+.+++++|
T Consensus 102 ~~~~~~~L 109 (110)
T 2zgd_A 102 NEDLAEIL 109 (110)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHh
Confidence 77776665
No 115
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=37.24 E-value=26 Score=39.57 Aligned_cols=29 Identities=14% Similarity=0.001 Sum_probs=17.6
Q ss_pred hHHHHHHHcCCHHH----HHHHHHCCCCCCccc
Q psy8109 216 KALCWALQEKKTDI----AKLLVDKGVPLNLVD 244 (1011)
Q Consensus 216 t~L~~Aa~~G~~~i----v~~Ll~~g~~~~~~~ 244 (1011)
..|..+++.|+++- ++...+.|..++...
T Consensus 31 ~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~t 63 (501)
T 4g26_A 31 QKLDMCSKKGDVLEALRLYDEARRNGVQLSQYH 63 (501)
T ss_dssp HHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhH
Confidence 44666778888654 444455677665443
No 116
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=33.87 E-value=1.1e+02 Score=28.73 Aligned_cols=134 Identities=10% Similarity=0.063 Sum_probs=86.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q psy8109 257 ETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRNRTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACR 336 (1011)
Q Consensus 257 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~ 336 (1011)
+..+=|..|...|++++.--+.+..-+... ....=..|...|++++++.-..+-. ++ ...+.+...
T Consensus 7 D~~~rF~LAL~lg~l~~A~e~a~~l~~~~~-----Wk~Lg~~AL~~gn~~lAe~cy~~~~--D~-------~~L~~Ly~~ 72 (177)
T 3mkq_B 7 DPHIRFDLALEYGNLDAALDEAKKLNDSIT-----WERLIQEALAQGNASLAEMIYQTQH--SF-------DKLSFLYLV 72 (177)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHCCHHH-----HHHHHHHHHHTTCHHHHHHHHHHTT--CH-------HHHHHHHHH
T ss_pred ChHHHHHHHHhcCCHHHHHHHHHHhCCHHH-----HHHHHHHHHHcCChHHHHHHHHHhC--CH-------HHHHHHHHH
Confidence 345678999999999988777654211111 2233456788899999999887543 11 134445556
Q ss_pred cCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCh-hHHHHHHhcCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhcc
Q psy8109 337 RKCLEIVKILLDKGADINSGNDDGCTPLFCAIAQNCL-EVFNYLVNHGCDLSVPEGERTALHMASQFGNLEMVNYLLKHI 415 (1011)
Q Consensus 337 ~g~~~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g~~-~iv~~Ll~~g~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~~ 415 (1011)
.|+.+-++.|.+.- ....+-..+.+.+...|.. +.+++|.+.|-- .-+...|..+|..++.+-+++..
T Consensus 73 tg~~e~L~kla~iA----~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~-------~eA~~~A~t~g~~~~a~~~~~~~ 141 (177)
T 3mkq_B 73 TGDVNKLSKMQNIA----QTREDFGSMLLNTFYNNSTKERSSIFAEGGSL-------PLAYAVAKANGDEAAASAFLEQA 141 (177)
T ss_dssp HTCHHHHHHHHHHH----HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCH-------HHHHHHHHHTTCHHHHHHHHHHT
T ss_pred hCCHHHHHHHHHHH----HHCccHHHHHHHHHHcCCHHHHHHHHHHCCCh-------HHHHHHHHHcCcHHHHHHHHHHh
Confidence 77777766664310 0112233577888788876 577777776532 24677788899999999998764
No 117
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=27.02 E-value=1.5e+02 Score=27.73 Aligned_cols=133 Identities=11% Similarity=-0.009 Sum_probs=87.4
Q ss_pred CcchHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q psy8109 213 QGYKALCWALQEKKTDIAKLLVDKGVPLNLVDKGVPLNYSRRIIETDTPLHSAILNSDIELVKLLLEKGANPLAIEKSRN 292 (1011)
Q Consensus 213 ~g~t~L~~Aa~~G~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g 292 (1011)
+..+=+..|.+.|++++.-.+.+..-+ . ..+...=..|...|++++++.-..+-.+..
T Consensus 7 D~~~rF~LAL~lg~l~~A~e~a~~l~~---~------------~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~------- 64 (177)
T 3mkq_B 7 DPHIRFDLALEYGNLDAALDEAKKLND---S------------ITWERLIQEALAQGNASLAEMIYQTQHSFD------- 64 (177)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHCC---H------------HHHHHHHHHHHHTTCHHHHHHHHHHTTCHH-------
T ss_pred ChHHHHHHHHhcCCHHHHHHHHHHhCC---H------------HHHHHHHHHHHHcCChHHHHHHHHHhCCHH-------
Confidence 344668899999999988766542100 0 023344567888999999999888765532
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCcH-HHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy8109 293 RTALHVAAIVESVDIVKLLFDYGAEKSVNVQNVAGLTPLHIACRRKCL-EIVKILLDKGADINSGNDDGCTPLFCAIAQN 371 (1011)
Q Consensus 293 ~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L~~Aa~~g~~-~iv~~Ll~~ga~~n~~~~~g~t~L~~A~~~g 371 (1011)
..+.+....|+.+-++.|... .....+-..+.+.+...|++ +.+++|.+.|--+ -+...|-.+|
T Consensus 65 -~L~~Ly~~tg~~e~L~kla~i------A~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~--------eA~~~A~t~g 129 (177)
T 3mkq_B 65 -KLSFLYLVTGDVNKLSKMQNI------AQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLP--------LAYAVAKANG 129 (177)
T ss_dssp -HHHHHHHHHTCHHHHHHHHHH------HHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHH--------HHHHHHHHTT
T ss_pred -HHHHHHHHhCCHHHHHHHHHH------HHHCccHHHHHHHHHHcCCHHHHHHHHHHCCChH--------HHHHHHHHcC
Confidence 245666677888877776532 11222334677778778876 5677777654321 2566777889
Q ss_pred ChhHHHHHHhc
Q psy8109 372 CLEVFNYLVNH 382 (1011)
Q Consensus 372 ~~~iv~~Ll~~ 382 (1011)
..++.+-+++.
T Consensus 130 ~~~~a~~~~~~ 140 (177)
T 3mkq_B 130 DEAAASAFLEQ 140 (177)
T ss_dssp CHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 99998888763
Done!